Query 027517
Match_columns 222
No_of_seqs 181 out of 1496
Neff 10.9
Searched_HMMs 29240
Date Mon Mar 25 18:46:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027517.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027517hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 100.0 2.6E-27 9E-32 177.1 21.1 183 32-222 68-256 (261)
2 3dlc_A Putative S-adenosyl-L-m 99.9 2.8E-26 9.4E-31 167.7 17.5 196 4-216 14-209 (219)
3 3dtn_A Putative methyltransfer 99.9 6.6E-26 2.2E-30 167.6 19.1 206 5-221 15-224 (234)
4 3dh0_A SAM dependent methyltra 99.9 4.3E-25 1.5E-29 161.6 19.1 166 24-222 27-192 (219)
5 1vl5_A Unknown conserved prote 99.9 1E-24 3.4E-29 163.7 16.7 165 24-211 27-191 (260)
6 1nkv_A Hypothetical protein YJ 99.9 1.2E-24 4.2E-29 162.8 16.3 166 20-210 22-187 (256)
7 3ujc_A Phosphoethanolamine N-m 99.9 3.6E-24 1.2E-28 161.0 18.4 161 24-212 45-208 (266)
8 3kkz_A Uncharacterized protein 99.9 2.4E-24 8.1E-29 162.3 17.0 164 24-213 35-199 (267)
9 3hnr_A Probable methyltransfer 99.9 2.7E-24 9.3E-29 157.4 16.1 162 25-210 36-201 (220)
10 2o57_A Putative sarcosine dime 99.9 5.7E-24 2E-28 162.5 18.6 164 24-211 68-235 (297)
11 1xxl_A YCGJ protein; structura 99.9 4.8E-24 1.6E-28 158.0 17.3 164 24-210 11-174 (239)
12 3bus_A REBM, methyltransferase 99.9 1.3E-23 4.4E-28 158.7 19.3 170 22-212 49-218 (273)
13 3f4k_A Putative methyltransfer 99.9 9.5E-24 3.3E-28 158.0 18.2 166 24-215 35-201 (257)
14 3ocj_A Putative exported prote 99.9 1.8E-24 6.1E-29 165.9 14.0 179 31-222 115-303 (305)
15 3l8d_A Methyltransferase; stru 99.9 1.6E-23 5.6E-28 155.4 17.9 150 33-211 52-201 (242)
16 3gwz_A MMCR; methyltransferase 99.9 6.1E-23 2.1E-27 161.2 21.4 174 25-222 193-368 (369)
17 3mgg_A Methyltransferase; NYSG 99.9 1.1E-23 3.7E-28 159.4 16.5 173 20-210 23-198 (276)
18 3h2b_A SAM-dependent methyltra 99.9 4.6E-24 1.6E-28 154.3 13.0 142 35-213 42-185 (203)
19 3vc1_A Geranyl diphosphate 2-C 99.9 3.3E-23 1.1E-27 159.3 16.9 162 25-211 107-270 (312)
20 3ou2_A SAM-dependent methyltra 99.9 6E-23 2.1E-27 149.9 17.1 170 26-214 37-209 (218)
21 3dli_A Methyltransferase; PSI- 99.9 3.6E-23 1.2E-27 153.4 15.9 169 5-211 12-185 (240)
22 3ege_A Putative methyltransfer 99.9 3.1E-23 1E-27 155.7 15.5 159 20-210 20-178 (261)
23 3g5l_A Putative S-adenosylmeth 99.9 4.2E-23 1.4E-27 154.2 15.7 113 25-145 35-147 (253)
24 2p35_A Trans-aconitate 2-methy 99.9 1.3E-22 4.5E-27 152.0 18.1 163 24-205 23-185 (259)
25 2ip2_A Probable phenazine-spec 99.9 3.7E-22 1.3E-26 154.9 20.9 174 24-222 158-333 (334)
26 2p7i_A Hypothetical protein; p 99.9 6.4E-23 2.2E-27 152.7 15.8 160 32-211 40-200 (250)
27 3i53_A O-methyltransferase; CO 99.9 9.5E-23 3.3E-27 158.1 17.2 164 31-222 166-331 (332)
28 4a6d_A Hydroxyindole O-methylt 99.9 3.2E-22 1.1E-26 156.1 19.9 174 25-222 170-345 (353)
29 3i9f_A Putative type 11 methyl 99.9 3.3E-23 1.1E-27 145.7 13.0 150 26-220 9-158 (170)
30 1x19_A CRTF-related protein; m 99.9 4E-22 1.4E-26 156.2 20.4 177 24-222 180-358 (359)
31 3bkw_A MLL3908 protein, S-aden 99.9 1.6E-22 5.4E-27 150.1 17.1 177 24-210 33-214 (243)
32 2r3s_A Uncharacterized protein 99.9 4E-22 1.4E-26 154.8 19.7 175 25-221 154-333 (335)
33 3hem_A Cyclopropane-fatty-acyl 99.9 2.4E-22 8.2E-27 153.9 18.1 165 24-213 62-246 (302)
34 4htf_A S-adenosylmethionine-de 99.9 4.3E-23 1.5E-27 156.8 13.7 165 34-211 68-233 (285)
35 1y8c_A S-adenosylmethionine-de 99.9 6.2E-23 2.1E-27 152.5 14.3 191 18-222 19-244 (246)
36 3mcz_A O-methyltransferase; ad 99.9 2.1E-22 7.2E-27 157.4 17.8 174 26-222 170-348 (352)
37 4fsd_A Arsenic methyltransfera 99.9 9.6E-23 3.3E-27 160.8 15.9 159 32-209 81-250 (383)
38 1kpg_A CFA synthase;, cyclopro 99.9 3.5E-22 1.2E-26 151.9 17.9 172 24-212 54-230 (287)
39 3pfg_A N-methyltransferase; N, 99.9 5.4E-23 1.9E-27 154.5 13.2 177 33-222 49-248 (263)
40 3gu3_A Methyltransferase; alph 99.9 2E-22 6.7E-27 153.0 16.2 111 30-145 18-128 (284)
41 3dp7_A SAM-dependent methyltra 99.9 1.7E-22 5.8E-27 158.4 16.1 172 33-221 178-353 (363)
42 3ccf_A Cyclopropane-fatty-acyl 99.9 4.5E-22 1.5E-26 150.7 17.8 163 25-211 48-211 (279)
43 1xtp_A LMAJ004091AAA; SGPP, st 99.9 9.7E-23 3.3E-27 152.2 13.8 155 24-211 83-239 (254)
44 3bkx_A SAM-dependent methyltra 99.9 5.4E-22 1.9E-26 149.9 18.1 177 24-211 33-220 (275)
45 3e23_A Uncharacterized protein 99.9 1.7E-22 5.7E-27 147.0 14.7 141 32-212 41-184 (211)
46 2yqz_A Hypothetical protein TT 99.9 3.3E-22 1.1E-26 150.1 16.1 155 31-208 36-194 (263)
47 3sm3_A SAM-dependent methyltra 99.9 1E-22 3.4E-27 150.4 12.1 173 33-210 29-207 (235)
48 3lst_A CALO1 methyltransferase 99.9 8.7E-22 3E-26 153.6 18.0 170 25-221 175-346 (348)
49 3e8s_A Putative SAM dependent 99.9 1.7E-22 5.9E-27 148.3 13.3 164 24-210 42-209 (227)
50 3lcc_A Putative methyl chlorid 99.9 3E-22 1E-26 148.0 14.4 142 35-213 67-210 (235)
51 3reo_A (ISO)eugenol O-methyltr 99.9 2.4E-21 8.4E-26 151.9 19.9 164 26-216 194-361 (368)
52 1qzz_A RDMB, aclacinomycin-10- 99.9 2.3E-21 7.8E-26 152.7 19.3 175 25-222 173-355 (374)
53 1fp1_D Isoliquiritigenin 2'-O- 99.9 1.3E-21 4.6E-26 153.8 17.8 167 26-222 200-372 (372)
54 3p9c_A Caffeic acid O-methyltr 99.9 3.4E-21 1.2E-25 150.8 19.4 169 26-222 192-364 (364)
55 2fk8_A Methoxy mycolic acid sy 99.9 9.3E-22 3.2E-26 151.7 15.7 171 24-211 80-255 (318)
56 1pjz_A Thiopurine S-methyltran 99.9 1.6E-22 5.3E-27 146.2 10.6 151 27-211 15-177 (203)
57 3d2l_A SAM-dependent methyltra 99.9 3.6E-22 1.2E-26 148.2 12.7 127 5-145 9-139 (243)
58 3bxo_A N,N-dimethyltransferase 99.9 7.5E-22 2.5E-26 146.1 14.2 177 33-222 39-238 (239)
59 2aot_A HMT, histamine N-methyl 99.9 3.9E-22 1.3E-26 152.0 12.7 155 33-207 51-218 (292)
60 2ex4_A Adrenal gland protein A 99.9 1.3E-22 4.6E-27 150.4 9.9 146 34-211 79-226 (241)
61 1vlm_A SAM-dependent methyltra 99.9 3.1E-21 1.1E-25 141.0 16.9 143 34-211 47-189 (219)
62 3jwg_A HEN1, methyltransferase 99.9 2E-21 6.8E-26 142.1 15.6 163 24-207 19-189 (219)
63 3jwh_A HEN1; methyltransferase 99.9 8.5E-22 2.9E-26 143.8 13.2 163 23-206 18-188 (217)
64 1tw3_A COMT, carminomycin 4-O- 99.9 8.6E-21 2.9E-25 148.7 19.6 175 25-222 174-355 (360)
65 2a14_A Indolethylamine N-methy 99.9 3.7E-22 1.3E-26 149.9 11.0 153 31-211 52-239 (263)
66 4e2x_A TCAB9; kijanose, tetron 99.9 6E-23 2.1E-27 163.8 6.4 169 23-221 96-266 (416)
67 1fp2_A Isoflavone O-methyltran 99.9 5.3E-21 1.8E-25 149.4 16.6 159 32-222 186-352 (352)
68 3cgg_A SAM-dependent methyltra 99.9 1E-20 3.4E-25 135.6 16.5 129 32-210 44-175 (195)
69 3g2m_A PCZA361.24; SAM-depende 99.9 3.2E-21 1.1E-25 147.4 14.7 185 22-211 71-275 (299)
70 2p8j_A S-adenosylmethionine-de 99.9 9.8E-22 3.4E-26 142.6 11.3 160 31-208 20-181 (209)
71 2xvm_A Tellurite resistance pr 99.9 3.1E-21 1.1E-25 138.9 13.1 148 26-210 24-173 (199)
72 3cc8_A Putative methyltransfer 99.9 1E-20 3.5E-25 139.1 15.3 162 25-212 24-187 (230)
73 2gb4_A Thiopurine S-methyltran 99.9 8.1E-21 2.8E-25 141.3 14.6 146 31-210 65-227 (252)
74 3g07_A 7SK snRNA methylphospha 99.9 1.1E-21 3.9E-26 149.3 9.7 156 34-210 46-269 (292)
75 3thr_A Glycine N-methyltransfe 99.9 1.2E-20 4.1E-25 143.8 15.4 125 18-145 41-177 (293)
76 1ve3_A Hypothetical protein PH 99.9 4.6E-21 1.6E-25 140.8 12.0 106 33-145 37-144 (227)
77 3g5t_A Trans-aconitate 3-methy 99.9 5.2E-21 1.8E-25 146.3 12.6 111 33-145 35-151 (299)
78 2gs9_A Hypothetical protein TT 99.9 2.8E-20 9.6E-25 135.2 15.4 135 34-201 36-171 (211)
79 1zg3_A Isoflavanone 4'-O-methy 99.9 2.2E-20 7.6E-25 146.2 15.9 159 33-222 192-358 (358)
80 4df3_A Fibrillarin-like rRNA/T 99.9 2.7E-20 9.3E-25 135.6 14.6 109 29-144 72-183 (233)
81 1ri5_A MRNA capping enzyme; me 99.8 4.5E-20 1.6E-24 140.8 16.2 174 32-211 62-251 (298)
82 4hg2_A Methyltransferase type 99.8 6.4E-21 2.2E-25 142.1 11.0 102 34-148 39-140 (257)
83 2kw5_A SLR1183 protein; struct 99.8 1.7E-20 6E-25 135.3 12.9 144 33-211 29-172 (202)
84 2g72_A Phenylethanolamine N-me 99.8 6.2E-21 2.1E-25 145.1 10.5 150 34-211 71-257 (289)
85 2i62_A Nicotinamide N-methyltr 99.8 1.4E-20 4.8E-25 141.3 11.4 152 32-211 54-240 (265)
86 1wzn_A SAM-dependent methyltra 99.8 8.8E-20 3E-24 136.1 15.6 110 28-145 35-147 (252)
87 2zfu_A Nucleomethylin, cerebra 99.8 8.7E-20 3E-24 133.0 14.8 126 32-222 65-190 (215)
88 2qe6_A Uncharacterized protein 99.8 1.8E-19 6.2E-24 135.7 16.5 156 24-206 66-238 (274)
89 3e05_A Precorrin-6Y C5,15-meth 99.8 6.2E-19 2.1E-23 127.4 18.0 119 20-145 26-144 (204)
90 1fbn_A MJ fibrillarin homologu 99.8 2.1E-19 7.2E-24 132.3 15.0 151 27-221 67-226 (230)
91 2b3t_A Protein methyltransfera 99.8 3.8E-19 1.3E-23 134.4 16.6 155 20-222 96-275 (276)
92 3ggd_A SAM-dependent methyltra 99.8 1.6E-19 5.4E-24 134.1 13.5 159 32-211 54-220 (245)
93 3m70_A Tellurite resistance pr 99.8 9.8E-20 3.4E-24 138.3 12.2 145 28-210 114-260 (286)
94 3ofk_A Nodulation protein S; N 99.8 9.9E-20 3.4E-24 132.7 11.4 115 22-145 39-156 (216)
95 2vdw_A Vaccinia virus capping 99.8 1.6E-19 5.5E-24 137.7 11.7 110 34-145 48-171 (302)
96 2avn_A Ubiquinone/menaquinone 99.8 7.1E-20 2.4E-24 137.2 9.0 101 34-146 54-155 (260)
97 3q87_B N6 adenine specific DNA 99.8 1.5E-18 5E-23 121.9 14.5 128 33-219 22-158 (170)
98 1dus_A MJ0882; hypothetical pr 99.8 1.6E-18 5.5E-23 123.9 14.6 119 21-146 39-160 (194)
99 3njr_A Precorrin-6Y methylase; 99.8 3.9E-18 1.3E-22 123.2 16.6 115 21-145 42-156 (204)
100 4dzr_A Protein-(glutamine-N5) 99.8 7E-20 2.4E-24 133.2 7.5 156 19-221 14-203 (215)
101 3evz_A Methyltransferase; NYSG 99.8 5E-18 1.7E-22 124.9 17.6 138 31-214 52-210 (230)
102 3hm2_A Precorrin-6Y C5,15-meth 99.8 1.1E-18 3.9E-23 123.2 13.5 119 19-145 10-129 (178)
103 1xdz_A Methyltransferase GIDB; 99.8 1.3E-18 4.3E-23 128.9 14.3 102 33-142 69-173 (240)
104 3mq2_A 16S rRNA methyltransfer 99.8 3.8E-19 1.3E-23 129.8 11.1 158 26-211 19-185 (218)
105 3id6_C Fibrillarin-like rRNA/T 99.8 5.1E-18 1.7E-22 123.9 16.6 160 22-221 61-229 (232)
106 3grz_A L11 mtase, ribosomal pr 99.8 1.8E-18 6.1E-23 125.1 14.2 128 32-210 58-185 (205)
107 3giw_A Protein of unknown func 99.8 9.4E-19 3.2E-23 129.8 12.5 163 20-206 63-243 (277)
108 3fpf_A Mtnas, putative unchara 99.8 2.8E-18 9.7E-23 128.7 14.7 108 28-144 116-223 (298)
109 3p2e_A 16S rRNA methylase; met 99.8 1.3E-18 4.5E-23 127.4 11.9 155 33-212 23-187 (225)
110 1nt2_A Fibrillarin-like PRE-rR 99.8 7.6E-18 2.6E-22 122.1 15.6 105 30-143 53-161 (210)
111 3orh_A Guanidinoacetate N-meth 99.8 2.5E-20 8.7E-25 137.6 2.4 104 33-142 59-169 (236)
112 1yzh_A TRNA (guanine-N(7)-)-me 99.8 9E-18 3.1E-22 122.2 15.8 107 33-143 40-156 (214)
113 1zx0_A Guanidinoacetate N-meth 99.8 1E-19 3.5E-24 134.5 5.4 108 32-145 58-172 (236)
114 3htx_A HEN1; HEN1, small RNA m 99.8 3.1E-18 1.1E-22 142.5 14.7 125 21-146 708-837 (950)
115 3mti_A RRNA methylase; SAM-dep 99.8 2.4E-18 8.2E-23 122.4 12.2 109 32-146 20-138 (185)
116 2pxx_A Uncharacterized protein 99.8 4.9E-18 1.7E-22 123.5 13.9 107 33-146 41-162 (215)
117 1yb2_A Hypothetical protein TA 99.8 1.6E-18 5.5E-23 130.9 11.5 111 25-144 101-212 (275)
118 3eey_A Putative rRNA methylase 99.8 2.5E-18 8.6E-23 123.5 11.9 114 31-146 19-142 (197)
119 1jsx_A Glucose-inhibited divis 99.8 4.4E-18 1.5E-22 123.2 13.1 113 21-142 49-164 (207)
120 3bgv_A MRNA CAP guanine-N7 met 99.8 1.8E-18 6.2E-23 133.0 11.3 112 33-146 33-158 (313)
121 3mb5_A SAM-dependent methyltra 99.8 5.8E-18 2E-22 126.4 13.7 113 24-144 83-195 (255)
122 2pwy_A TRNA (adenine-N(1)-)-me 99.8 9.3E-18 3.2E-22 125.5 14.4 113 24-144 86-199 (258)
123 1g8a_A Fibrillarin-like PRE-rR 99.8 3.3E-17 1.1E-21 120.3 16.8 104 31-142 70-177 (227)
124 2ipx_A RRNA 2'-O-methyltransfe 99.8 3.7E-18 1.3E-22 125.8 11.4 108 29-143 72-182 (233)
125 3bwc_A Spermidine synthase; SA 99.8 7.5E-18 2.6E-22 128.7 13.4 153 32-222 93-257 (304)
126 3lpm_A Putative methyltransfer 99.8 1.6E-17 5.3E-22 124.4 14.6 139 26-210 40-201 (259)
127 2fca_A TRNA (guanine-N(7)-)-me 99.8 1.2E-17 4.2E-22 121.3 13.5 107 33-143 37-153 (213)
128 3p9n_A Possible methyltransfer 99.8 7.1E-18 2.4E-22 120.4 12.1 122 21-147 28-157 (189)
129 2nxc_A L11 mtase, ribosomal pr 99.8 1.8E-17 6.2E-22 123.6 14.5 137 32-222 118-254 (254)
130 3m33_A Uncharacterized protein 99.8 2E-18 6.8E-23 126.7 8.7 119 33-210 47-167 (226)
131 3g89_A Ribosomal RNA small sub 99.8 1.2E-17 4.2E-22 124.0 12.7 119 17-143 57-184 (249)
132 3iv6_A Putative Zn-dependent a 99.8 7.6E-18 2.6E-22 125.1 11.3 116 20-145 31-150 (261)
133 3fzg_A 16S rRNA methylase; met 99.7 4.3E-18 1.5E-22 118.8 8.8 105 33-143 48-152 (200)
134 2yxd_A Probable cobalt-precorr 99.7 4.6E-17 1.6E-21 115.3 14.3 112 20-144 21-132 (183)
135 1l3i_A Precorrin-6Y methyltran 99.7 2.9E-17 9.9E-22 117.2 13.3 116 20-144 19-135 (192)
136 3uwp_A Histone-lysine N-methyl 99.7 5.7E-18 2E-22 131.6 10.1 125 22-148 161-293 (438)
137 2frn_A Hypothetical protein PH 99.7 7.6E-17 2.6E-21 121.7 15.9 140 33-216 124-268 (278)
138 1o54_A SAM-dependent O-methylt 99.7 2.5E-17 8.6E-22 124.5 13.3 113 24-144 102-214 (277)
139 3dmg_A Probable ribosomal RNA 99.7 1E-17 3.6E-22 131.3 11.4 106 33-145 232-342 (381)
140 3u81_A Catechol O-methyltransf 99.7 2.1E-17 7.3E-22 120.8 11.3 120 25-147 49-174 (221)
141 3lbf_A Protein-L-isoaspartate 99.7 4.3E-17 1.5E-21 118.2 12.6 113 21-145 64-176 (210)
142 1af7_A Chemotaxis receptor met 99.7 2.3E-17 7.7E-22 123.6 11.1 109 34-142 105-251 (274)
143 3lec_A NADB-rossmann superfami 99.7 9.5E-17 3.3E-21 116.5 13.8 141 33-221 20-162 (230)
144 2fyt_A Protein arginine N-meth 99.7 4.5E-17 1.5E-21 126.3 12.8 116 20-140 50-168 (340)
145 3tma_A Methyltransferase; thum 99.7 2.3E-16 7.8E-21 123.2 16.7 121 20-143 189-317 (354)
146 2h00_A Methyltransferase 10 do 99.7 1.9E-17 6.6E-22 123.5 10.0 156 34-213 65-241 (254)
147 3tfw_A Putative O-methyltransf 99.7 2.5E-16 8.5E-21 117.1 15.9 110 31-145 60-172 (248)
148 1ixk_A Methyltransferase; open 99.7 1.6E-16 5.4E-21 122.0 14.6 118 25-145 109-248 (315)
149 3dxy_A TRNA (guanine-N(7)-)-me 99.7 2.1E-17 7.3E-22 120.3 9.3 106 34-143 34-150 (218)
150 1i9g_A Hypothetical protein RV 99.7 1.5E-16 5E-21 120.4 14.2 116 24-145 89-205 (280)
151 2yxe_A Protein-L-isoaspartate 99.7 1.2E-16 4.3E-21 116.2 13.2 116 22-146 65-180 (215)
152 4dcm_A Ribosomal RNA large sub 99.7 9.5E-17 3.3E-21 125.8 13.3 123 21-145 209-336 (375)
153 3kr9_A SAM-dependent methyltra 99.7 1.7E-16 5.7E-21 115.0 13.3 141 33-221 14-156 (225)
154 3gnl_A Uncharacterized protein 99.7 2.1E-16 7.1E-21 115.6 13.4 140 33-220 20-161 (244)
155 3r0q_C Probable protein argini 99.7 1.2E-16 4.2E-21 125.5 13.0 120 18-143 47-169 (376)
156 2ozv_A Hypothetical protein AT 99.7 2.3E-16 7.9E-21 118.0 13.8 114 27-143 29-170 (260)
157 1dl5_A Protein-L-isoaspartate 99.7 1.1E-16 3.9E-21 123.1 12.3 116 21-145 62-177 (317)
158 3opn_A Putative hemolysin; str 99.7 1.1E-17 3.7E-22 122.9 6.2 157 26-211 28-185 (232)
159 3q7e_A Protein arginine N-meth 99.7 7.5E-17 2.6E-21 125.5 11.1 115 22-141 54-171 (349)
160 2b25_A Hypothetical protein; s 99.7 6.4E-16 2.2E-20 119.8 16.3 117 24-145 95-221 (336)
161 2ld4_A Anamorsin; methyltransf 99.7 4.6E-17 1.6E-21 114.8 8.9 117 30-202 8-128 (176)
162 2ift_A Putative methylase HI07 99.7 7.6E-17 2.6E-21 116.1 9.5 120 24-147 42-167 (201)
163 1p91_A Ribosomal RNA large sub 99.7 4.2E-16 1.5E-20 117.2 13.3 99 33-147 84-182 (269)
164 2pjd_A Ribosomal RNA small sub 99.7 1.5E-16 5.1E-21 123.7 11.1 117 22-145 184-305 (343)
165 3ckk_A TRNA (guanine-N(7)-)-me 99.7 1.4E-16 4.8E-21 117.3 10.0 110 33-143 45-168 (235)
166 2esr_A Methyltransferase; stru 99.7 8.1E-17 2.8E-21 113.7 8.4 121 23-148 19-143 (177)
167 3bzb_A Uncharacterized protein 99.7 1.4E-15 4.8E-20 115.0 15.6 120 22-143 67-205 (281)
168 1g6q_1 HnRNP arginine N-methyl 99.7 2.7E-16 9.1E-21 121.5 11.7 117 20-141 24-143 (328)
169 3hp7_A Hemolysin, putative; st 99.7 3.1E-16 1E-20 117.8 11.7 153 26-211 76-233 (291)
170 1vbf_A 231AA long hypothetical 99.7 4.3E-16 1.5E-20 114.6 12.3 112 21-146 57-168 (231)
171 1ej0_A FTSJ; methyltransferase 99.7 3.1E-16 1E-20 110.5 10.7 102 32-147 20-140 (180)
172 2y1w_A Histone-arginine methyl 99.7 6.8E-16 2.3E-20 120.1 13.4 117 20-142 36-154 (348)
173 2fhp_A Methylase, putative; al 99.7 2.4E-16 8.3E-21 112.1 10.1 124 20-148 29-159 (187)
174 1i1n_A Protein-L-isoaspartate 99.7 8.4E-16 2.9E-20 112.7 13.1 117 24-146 65-185 (226)
175 3adn_A Spermidine synthase; am 99.7 1.6E-15 5.5E-20 115.0 14.8 110 33-143 82-198 (294)
176 1u2z_A Histone-lysine N-methyl 99.7 6.6E-16 2.3E-20 122.2 13.1 123 22-147 230-363 (433)
177 3dr5_A Putative O-methyltransf 99.7 2.6E-16 8.8E-21 114.9 9.9 106 34-143 56-163 (221)
178 3gdh_A Trimethylguanosine synt 99.7 4.4E-18 1.5E-22 126.0 0.5 103 33-141 77-179 (241)
179 3duw_A OMT, O-methyltransferas 99.7 3.3E-16 1.1E-20 114.6 10.4 112 29-145 53-169 (223)
180 3ntv_A MW1564 protein; rossman 99.7 2.8E-16 9.6E-21 115.7 10.0 116 24-145 61-178 (232)
181 2fpo_A Methylase YHHF; structu 99.7 2.9E-16 1E-20 113.1 9.9 117 23-145 42-162 (202)
182 3tm4_A TRNA (guanine N2-)-meth 99.7 2.6E-15 8.9E-20 117.8 15.9 148 20-217 204-359 (373)
183 3r3h_A O-methyltransferase, SA 99.7 3.6E-17 1.2E-21 121.0 5.1 114 28-146 54-173 (242)
184 2gpy_A O-methyltransferase; st 99.7 3.8E-16 1.3E-20 115.0 9.5 117 23-145 43-162 (233)
185 2pbf_A Protein-L-isoaspartate 99.7 8.9E-16 3E-20 112.6 11.4 116 24-145 68-195 (227)
186 1jg1_A PIMT;, protein-L-isoasp 99.7 1.5E-15 5E-20 112.1 12.2 114 22-147 79-193 (235)
187 2bm8_A Cephalosporin hydroxyla 99.7 4.4E-16 1.5E-20 114.8 9.0 101 33-144 80-188 (236)
188 3c3p_A Methyltransferase; NP_9 99.6 5.2E-16 1.8E-20 112.5 9.1 107 33-145 55-162 (210)
189 3tr6_A O-methyltransferase; ce 99.6 2.5E-16 8.5E-21 115.4 7.3 110 31-145 61-176 (225)
190 1r18_A Protein-L-isoaspartate( 99.6 1.5E-15 5.1E-20 111.4 11.3 117 22-145 70-196 (227)
191 1ws6_A Methyltransferase; stru 99.6 2.4E-16 8.1E-21 110.5 6.5 119 21-148 26-152 (171)
192 3ajd_A Putative methyltransfer 99.6 1.9E-15 6.5E-20 113.9 11.8 118 26-146 75-214 (274)
193 3sso_A Methyltransferase; macr 99.6 3.8E-16 1.3E-20 121.2 8.0 99 34-145 216-326 (419)
194 1o9g_A RRNA methyltransferase; 99.6 8.7E-16 3E-20 114.3 9.6 111 33-145 50-216 (250)
195 2vdv_E TRNA (guanine-N(7)-)-me 99.6 3.2E-15 1.1E-19 111.0 11.9 110 33-143 48-173 (246)
196 1sui_A Caffeoyl-COA O-methyltr 99.6 9.6E-16 3.3E-20 113.7 8.7 110 30-144 75-191 (247)
197 2plw_A Ribosomal RNA methyltra 99.6 4.5E-15 1.6E-19 106.7 12.1 100 32-145 20-156 (201)
198 2pt6_A Spermidine synthase; tr 99.6 8.1E-15 2.8E-19 112.6 14.1 110 33-143 115-230 (321)
199 1iy9_A Spermidine synthase; ro 99.6 5.2E-15 1.8E-19 111.4 12.6 110 33-143 74-189 (275)
200 2yxl_A PH0851 protein, 450AA l 99.6 1.2E-14 4.1E-19 116.7 15.4 120 25-147 250-393 (450)
201 1inl_A Spermidine synthase; be 99.6 6.9E-15 2.4E-19 111.9 13.0 110 33-143 89-205 (296)
202 2igt_A SAM dependent methyltra 99.6 5E-15 1.7E-19 114.2 12.3 118 24-146 142-275 (332)
203 1nv8_A HEMK protein; class I a 99.6 9.8E-15 3.3E-19 110.4 13.7 117 20-142 109-248 (284)
204 2i7c_A Spermidine synthase; tr 99.6 7E-15 2.4E-19 111.2 12.8 111 32-143 76-192 (283)
205 2hnk_A SAM-dependent O-methylt 99.6 7.7E-15 2.6E-19 108.4 12.7 116 25-145 51-183 (239)
206 2yvl_A TRMI protein, hypotheti 99.6 9.9E-15 3.4E-19 108.3 13.2 112 24-145 81-192 (248)
207 2qm3_A Predicted methyltransfe 99.6 2.8E-14 9.4E-19 112.1 15.9 105 33-143 171-277 (373)
208 3cbg_A O-methyltransferase; cy 99.6 1.6E-15 5.6E-20 111.5 8.3 110 31-145 69-184 (232)
209 3a27_A TYW2, uncharacterized p 99.6 7.2E-15 2.5E-19 110.5 11.7 107 31-146 116-222 (272)
210 4hc4_A Protein arginine N-meth 99.6 4.2E-15 1.5E-19 115.7 10.6 116 20-141 69-187 (376)
211 1xj5_A Spermidine synthase 1; 99.6 1.3E-14 4.4E-19 111.8 13.2 110 32-142 118-234 (334)
212 3b3j_A Histone-arginine methyl 99.6 3.2E-15 1.1E-19 120.6 10.1 114 22-141 146-261 (480)
213 2b2c_A Spermidine synthase; be 99.6 7.9E-15 2.7E-19 112.1 11.3 110 33-143 107-222 (314)
214 3c3y_A Pfomt, O-methyltransfer 99.6 3.4E-15 1.2E-19 110.2 9.0 110 30-144 66-182 (237)
215 2o07_A Spermidine synthase; st 99.6 5.2E-15 1.8E-19 112.8 10.1 112 32-144 93-210 (304)
216 1uir_A Polyamine aminopropyltr 99.6 1.2E-14 4.1E-19 111.4 12.1 110 33-143 76-195 (314)
217 3k6r_A Putative transferase PH 99.6 6.8E-14 2.3E-18 104.7 15.4 112 23-145 116-227 (278)
218 2frx_A Hypothetical protein YE 99.6 2.5E-14 8.5E-19 115.2 13.6 117 27-146 108-249 (479)
219 2avd_A Catechol-O-methyltransf 99.6 3.4E-15 1.2E-19 109.6 7.9 112 29-145 64-181 (229)
220 2cmg_A Spermidine synthase; tr 99.6 3.6E-14 1.2E-18 105.9 13.2 100 33-143 71-171 (262)
221 3gjy_A Spermidine synthase; AP 99.6 2.4E-14 8.3E-19 108.7 12.0 107 36-146 91-203 (317)
222 3lcv_B Sisomicin-gentamicin re 99.6 2.9E-14 1E-18 104.1 11.9 105 33-144 131-237 (281)
223 3m4x_A NOL1/NOP2/SUN family pr 99.6 1.8E-14 6.3E-19 114.9 11.7 119 25-146 96-237 (456)
224 1mjf_A Spermidine synthase; sp 99.6 3.4E-14 1.2E-18 107.3 11.8 108 32-143 73-193 (281)
225 3m6w_A RRNA methylase; rRNA me 99.6 2.1E-14 7.1E-19 114.7 10.7 118 25-146 92-232 (464)
226 1sqg_A SUN protein, FMU protei 99.6 7E-14 2.4E-18 111.7 13.8 118 24-146 236-377 (429)
227 4azs_A Methyltransferase WBDD; 99.5 2.8E-15 9.7E-20 123.7 5.4 108 34-147 66-177 (569)
228 2xyq_A Putative 2'-O-methyl tr 99.5 4.5E-14 1.5E-18 106.3 11.4 97 30-145 59-173 (290)
229 2wa2_A Non-structural protein 99.5 1.1E-14 3.8E-19 109.4 7.6 106 31-145 79-195 (276)
230 1ne2_A Hypothetical protein TA 99.5 2.2E-13 7.4E-18 97.9 14.0 90 31-133 48-139 (200)
231 2oxt_A Nucleoside-2'-O-methylt 99.5 1.4E-14 4.6E-19 108.3 7.8 109 28-145 68-187 (265)
232 1wy7_A Hypothetical protein PH 99.5 4.2E-13 1.4E-17 96.8 15.5 99 32-142 47-147 (207)
233 2nyu_A Putative ribosomal RNA 99.5 1E-13 3.4E-18 99.2 11.4 101 32-146 20-148 (196)
234 1zq9_A Probable dimethyladenos 99.5 3.4E-14 1.2E-18 107.5 9.0 114 20-140 14-144 (285)
235 3dou_A Ribosomal RNA large sub 99.5 1.1E-13 3.9E-18 98.6 10.3 98 32-146 23-142 (191)
236 2b78_A Hypothetical protein SM 99.5 2.5E-13 8.6E-18 106.9 12.1 110 33-146 211-334 (385)
237 3frh_A 16S rRNA methylase; met 99.5 4.4E-13 1.5E-17 97.0 12.1 102 33-143 104-206 (253)
238 2p41_A Type II methyltransfera 99.5 1.5E-13 5E-18 104.8 8.7 104 32-146 80-194 (305)
239 4dmg_A Putative uncharacterize 99.5 1.6E-12 5.4E-17 102.3 14.8 107 33-146 213-329 (393)
240 2f8l_A Hypothetical protein LM 99.5 6.8E-13 2.3E-17 103.1 11.6 110 31-145 127-258 (344)
241 3c0k_A UPF0064 protein YCCW; P 99.5 1.9E-12 6.4E-17 102.5 14.2 109 33-145 219-341 (396)
242 2yx1_A Hypothetical protein MJ 99.4 2E-12 6.8E-17 100.1 13.3 101 33-146 194-294 (336)
243 1uwv_A 23S rRNA (uracil-5-)-me 99.4 4.2E-12 1.4E-16 101.5 15.5 112 21-142 273-388 (433)
244 1wxx_A TT1595, hypothetical pr 99.4 2.4E-12 8.2E-17 101.4 12.9 107 34-146 209-328 (382)
245 2as0_A Hypothetical protein PH 99.4 7.6E-13 2.6E-17 104.7 9.7 110 33-146 216-338 (396)
246 3v97_A Ribosomal RNA large sub 99.4 1.1E-12 3.8E-17 110.3 11.1 110 33-145 538-659 (703)
247 2h1r_A Dimethyladenosine trans 99.4 1E-12 3.4E-17 100.1 9.8 93 19-119 27-119 (299)
248 2ih2_A Modification methylase 99.4 3.6E-12 1.2E-16 101.7 13.5 113 20-145 25-166 (421)
249 3gru_A Dimethyladenosine trans 99.4 1.7E-12 5.9E-17 98.1 10.6 91 19-117 35-125 (295)
250 2b9e_A NOL1/NOP2/SUN domain fa 99.4 1.5E-11 5.2E-16 93.7 15.6 117 26-146 94-237 (309)
251 1yub_A Ermam, rRNA methyltrans 99.3 1.2E-13 4.1E-18 102.4 1.0 115 20-143 15-145 (245)
252 3ldu_A Putative methylase; str 99.3 1.3E-11 4.6E-16 96.9 12.2 123 20-145 181-346 (385)
253 3k0b_A Predicted N6-adenine-sp 99.3 1.8E-11 6.2E-16 96.4 12.9 123 20-145 187-352 (393)
254 2okc_A Type I restriction enzy 99.3 6E-12 2E-16 101.0 10.2 124 20-145 157-309 (445)
255 3ldg_A Putative uncharacterize 99.3 3E-11 1E-15 94.7 13.5 123 20-145 180-345 (384)
256 2jjq_A Uncharacterized RNA met 99.3 2.6E-11 9E-16 96.4 13.1 100 32-143 288-387 (425)
257 1qam_A ERMC' methyltransferase 99.3 7.9E-11 2.7E-15 87.1 13.7 89 19-116 15-104 (244)
258 2qfm_A Spermine synthase; sper 99.3 3.6E-12 1.2E-16 98.0 6.3 109 33-143 187-314 (364)
259 3tqs_A Ribosomal RNA small sub 99.3 1.5E-11 5.3E-16 91.2 8.9 89 19-116 14-106 (255)
260 3fut_A Dimethyladenosine trans 99.3 2.6E-11 9E-16 90.6 9.6 91 19-119 32-123 (271)
261 3b5i_A S-adenosyl-L-methionine 99.2 2.9E-10 9.9E-15 88.4 14.4 176 35-211 53-299 (374)
262 3o4f_A Spermidine synthase; am 99.2 1.2E-10 4.1E-15 87.3 11.8 111 32-143 81-198 (294)
263 2ar0_A M.ecoki, type I restric 99.2 8.2E-11 2.8E-15 96.3 10.1 124 22-145 157-314 (541)
264 1m6y_A S-adenosyl-methyltransf 99.2 4.9E-11 1.7E-15 90.4 8.1 90 22-116 14-108 (301)
265 2efj_A 3,7-dimethylxanthine me 99.2 2.4E-10 8.2E-15 89.0 10.8 161 35-209 53-291 (384)
266 2dul_A N(2),N(2)-dimethylguano 99.2 6.2E-11 2.1E-15 92.8 7.3 102 34-143 47-164 (378)
267 3v97_A Ribosomal RNA large sub 99.2 1.2E-09 4.1E-14 92.1 15.5 123 20-144 176-348 (703)
268 3axs_A Probable N(2),N(2)-dime 99.2 7.1E-11 2.4E-15 92.5 7.5 104 33-143 51-158 (392)
269 3uzu_A Ribosomal RNA small sub 99.1 1.9E-10 6.4E-15 86.4 8.9 90 19-115 27-123 (279)
270 3bt7_A TRNA (uracil-5-)-methyl 99.1 1.8E-10 6.2E-15 90.2 9.2 110 22-144 202-327 (369)
271 2qy6_A UPF0209 protein YFCK; s 99.1 5.1E-10 1.8E-14 83.0 10.1 109 33-141 59-211 (257)
272 3ftd_A Dimethyladenosine trans 99.1 6E-10 2E-14 82.4 10.3 88 19-116 16-105 (249)
273 1qyr_A KSGA, high level kasuga 99.1 2.5E-10 8.7E-15 84.5 7.7 91 19-117 6-101 (252)
274 2r6z_A UPF0341 protein in RSP 99.1 9.9E-11 3.4E-15 87.0 5.0 87 27-118 76-173 (258)
275 1m6e_X S-adenosyl-L-methionnin 99.1 1.3E-09 4.4E-14 84.3 10.4 163 35-208 52-278 (359)
276 4gqb_A Protein arginine N-meth 99.0 1.7E-09 5.7E-14 89.3 11.3 102 35-140 358-464 (637)
277 3evf_A RNA-directed RNA polyme 99.0 2E-09 6.8E-14 79.2 8.3 111 28-145 68-186 (277)
278 3khk_A Type I restriction-modi 99.0 1.9E-09 6.5E-14 88.2 8.3 123 20-145 231-397 (544)
279 2oyr_A UPF0341 protein YHIQ; a 98.9 1.7E-09 5.7E-14 80.2 6.4 107 25-135 77-192 (258)
280 3lkd_A Type I restriction-modi 98.9 1.1E-08 3.6E-13 83.7 11.7 123 22-145 205-360 (542)
281 3cvo_A Methyltransferase-like 98.9 1.4E-08 4.8E-13 72.2 10.3 101 34-143 30-154 (202)
282 3ua3_A Protein arginine N-meth 98.9 2.7E-09 9.2E-14 88.2 6.7 103 35-140 410-531 (745)
283 4fzv_A Putative methyltransfer 98.9 2.5E-08 8.4E-13 77.3 11.1 121 25-146 139-287 (359)
284 3ll7_A Putative methyltransfer 98.9 1.4E-09 4.8E-14 85.5 4.1 75 34-114 93-171 (410)
285 3gcz_A Polyprotein; flavivirus 98.8 4.8E-09 1.6E-13 77.3 4.7 113 26-145 82-203 (282)
286 3s1s_A Restriction endonucleas 98.8 6.8E-08 2.3E-12 81.2 11.2 113 33-145 320-467 (878)
287 2wk1_A NOVP; transferase, O-me 98.7 8.1E-08 2.8E-12 71.9 9.5 109 33-144 105-245 (282)
288 1wg8_A Predicted S-adenosylmet 98.7 8.5E-08 2.9E-12 71.1 9.3 87 21-117 9-100 (285)
289 2k4m_A TR8_protein, UPF0146 pr 98.7 1.1E-07 3.9E-12 63.0 8.5 90 33-147 34-125 (153)
290 4auk_A Ribosomal RNA large sub 98.7 2.4E-07 8.1E-12 71.4 11.1 88 32-136 209-296 (375)
291 2vz8_A Fatty acid synthase; tr 98.7 1E-08 3.5E-13 96.7 4.3 151 33-209 1239-1394(2512)
292 3c6k_A Spermine synthase; sper 98.7 6E-08 2.1E-12 75.0 7.6 108 33-142 204-330 (381)
293 3eld_A Methyltransferase; flav 98.5 2.8E-07 9.7E-12 68.4 7.7 107 32-145 79-193 (300)
294 3ufb_A Type I restriction-modi 98.5 1.8E-06 6.3E-11 70.5 13.1 123 20-145 203-364 (530)
295 1rjd_A PPM1P, carboxy methyl t 98.4 4.9E-06 1.7E-10 64.0 13.0 161 25-203 88-281 (334)
296 3tka_A Ribosomal RNA small sub 98.4 2E-06 6.8E-11 65.3 9.5 90 22-118 45-140 (347)
297 3p8z_A Mtase, non-structural p 98.4 3.1E-06 1.1E-10 60.7 9.9 115 26-148 70-191 (267)
298 2px2_A Genome polyprotein [con 98.4 3.6E-07 1.2E-11 66.4 5.0 112 26-145 65-185 (269)
299 3lkz_A Non-structural protein 98.3 6.7E-06 2.3E-10 60.9 9.6 113 26-146 86-207 (321)
300 2uyo_A Hypothetical protein ML 98.1 0.0001 3.5E-09 56.1 13.0 108 35-146 103-221 (310)
301 3r24_A NSP16, 2'-O-methyl tran 98.0 3.4E-05 1.2E-09 57.2 9.2 101 30-149 105-223 (344)
302 2zig_A TTHA0409, putative modi 98.0 1.7E-05 5.9E-10 60.1 8.0 55 24-82 226-280 (297)
303 3vyw_A MNMC2; tRNA wobble urid 98.0 6.1E-05 2.1E-09 56.8 10.3 134 33-211 95-249 (308)
304 3iei_A Leucine carboxyl methyl 98.0 0.002 6.9E-08 49.4 18.7 170 24-210 79-281 (334)
305 1i4w_A Mitochondrial replicati 97.8 0.00012 4E-09 56.6 8.6 74 20-100 38-117 (353)
306 2oo3_A Protein involved in cat 97.5 0.00021 7.2E-09 53.1 6.0 108 34-149 91-204 (283)
307 1g60_A Adenine-specific methyl 97.5 0.00038 1.3E-08 51.6 7.2 54 24-81 203-256 (260)
308 3g7u_A Cytosine-specific methy 97.2 0.0047 1.6E-07 48.3 11.5 73 36-119 3-84 (376)
309 2dph_A Formaldehyde dismutase; 97.1 0.0024 8.2E-08 50.4 8.4 105 28-144 179-300 (398)
310 1f8f_A Benzyl alcohol dehydrog 96.9 0.0059 2E-07 47.6 9.4 101 28-145 184-291 (371)
311 3tos_A CALS11; methyltransfera 96.9 0.015 5E-07 42.8 10.5 108 35-145 70-219 (257)
312 2py6_A Methyltransferase FKBM; 96.9 0.003 1E-07 50.0 7.4 67 32-98 224-292 (409)
313 3two_A Mannitol dehydrogenase; 96.9 0.0045 1.5E-07 47.8 8.2 97 28-145 170-267 (348)
314 3ps9_A TRNA 5-methylaminomethy 96.8 0.012 4.2E-07 49.6 11.2 107 34-140 66-216 (676)
315 2zwa_A Leucine carboxyl methyl 96.8 0.069 2.4E-06 45.3 15.6 159 34-210 107-309 (695)
316 1kol_A Formaldehyde dehydrogen 96.8 0.0072 2.5E-07 47.6 9.0 104 29-144 180-301 (398)
317 3pvc_A TRNA 5-methylaminomethy 96.8 0.0086 2.9E-07 50.7 9.9 107 34-140 58-208 (689)
318 1pqw_A Polyketide synthase; ro 96.7 0.01 3.6E-07 41.7 8.4 98 29-144 33-138 (198)
319 3qv2_A 5-cytosine DNA methyltr 96.7 0.023 7.7E-07 43.5 10.6 75 35-119 10-89 (327)
320 3s2e_A Zinc-containing alcohol 96.6 0.0089 3E-07 46.0 8.1 101 28-145 160-265 (340)
321 1g55_A DNA cytosine methyltran 96.5 0.0027 9.3E-08 49.0 4.7 75 36-119 3-81 (343)
322 3fpc_A NADP-dependent alcohol 96.5 0.011 3.8E-07 45.7 8.1 102 28-146 160-269 (352)
323 1pl8_A Human sorbitol dehydrog 96.5 0.017 5.8E-07 44.7 9.1 100 28-144 165-274 (356)
324 3gms_A Putative NADPH:quinone 96.5 0.017 5.9E-07 44.3 9.0 100 28-145 138-245 (340)
325 4ej6_A Putative zinc-binding d 96.4 0.029 9.9E-07 43.7 10.1 101 28-145 176-286 (370)
326 3goh_A Alcohol dehydrogenase, 96.4 0.0091 3.1E-07 45.4 6.9 93 28-143 136-229 (315)
327 4f3n_A Uncharacterized ACR, CO 96.4 0.0099 3.4E-07 47.0 7.1 47 35-81 138-188 (432)
328 3m6i_A L-arabinitol 4-dehydrog 96.3 0.049 1.7E-06 42.2 11.0 103 28-146 173-286 (363)
329 1e3j_A NADP(H)-dependent ketos 96.3 0.042 1.4E-06 42.4 10.3 100 28-144 162-272 (352)
330 3uog_A Alcohol dehydrogenase; 96.3 0.021 7.3E-07 44.3 8.7 101 28-146 183-290 (363)
331 1uuf_A YAHK, zinc-type alcohol 96.3 0.026 8.8E-07 44.0 9.1 97 30-144 190-289 (369)
332 1zkd_A DUF185; NESG, RPR58, st 96.2 0.041 1.4E-06 43.0 9.8 81 31-120 77-163 (387)
333 3uko_A Alcohol dehydrogenase c 96.2 0.043 1.5E-06 42.8 10.0 101 28-145 187-297 (378)
334 3jyn_A Quinone oxidoreductase; 96.2 0.024 8.2E-07 43.2 8.3 99 29-145 135-241 (325)
335 4b7c_A Probable oxidoreductase 96.1 0.033 1.1E-06 42.7 8.9 100 28-144 143-249 (336)
336 2c7p_A Modification methylase 96.1 0.018 6.3E-07 44.0 7.3 72 35-119 11-84 (327)
337 4a2c_A Galactitol-1-phosphate 96.1 0.19 6.3E-06 38.6 12.9 106 26-147 152-264 (346)
338 1p0f_A NADP-dependent alcohol 96.1 0.056 1.9E-06 42.1 9.9 101 28-145 185-295 (373)
339 3ip1_A Alcohol dehydrogenase, 96.0 0.059 2E-06 42.4 10.0 100 31-146 210-321 (404)
340 1v3u_A Leukotriene B4 12- hydr 96.0 0.039 1.3E-06 42.2 8.5 100 28-144 139-245 (333)
341 1boo_A Protein (N-4 cytosine-s 96.0 0.024 8.4E-07 43.3 7.3 54 24-81 243-296 (323)
342 1cdo_A Alcohol dehydrogenase; 95.9 0.052 1.8E-06 42.3 9.3 101 28-145 186-296 (374)
343 2fzw_A Alcohol dehydrogenase c 95.9 0.065 2.2E-06 41.7 9.8 101 28-145 184-294 (373)
344 2jhf_A Alcohol dehydrogenase E 95.9 0.065 2.2E-06 41.7 9.7 101 28-145 185-295 (374)
345 2d8a_A PH0655, probable L-thre 95.9 0.047 1.6E-06 42.0 8.8 100 28-145 162-269 (348)
346 4eye_A Probable oxidoreductase 95.8 0.032 1.1E-06 42.9 7.5 98 28-144 153-258 (342)
347 1e3i_A Alcohol dehydrogenase, 95.8 0.061 2.1E-06 41.9 9.1 100 28-144 189-298 (376)
348 2c0c_A Zinc binding alcohol de 95.7 0.094 3.2E-06 40.6 9.7 98 29-144 158-262 (362)
349 2h6e_A ADH-4, D-arabinose 1-de 95.7 0.026 8.8E-07 43.4 6.4 97 31-144 168-270 (344)
350 1eg2_A Modification methylase 95.7 0.035 1.2E-06 42.3 7.0 53 24-80 233-288 (319)
351 1piw_A Hypothetical zinc-type 95.6 0.044 1.5E-06 42.4 7.7 99 30-144 175-277 (360)
352 4dvj_A Putative zinc-dependent 95.6 0.14 4.7E-06 39.7 10.5 93 34-142 171-269 (363)
353 4h0n_A DNMT2; SAH binding, tra 95.6 0.023 7.7E-07 43.7 5.9 75 36-119 4-82 (333)
354 2qrv_A DNA (cytosine-5)-methyl 95.6 0.048 1.7E-06 41.0 7.5 76 33-117 14-94 (295)
355 3qwb_A Probable quinone oxidor 95.6 0.046 1.6E-06 41.8 7.5 98 30-145 144-249 (334)
356 2j3h_A NADP-dependent oxidored 95.6 0.067 2.3E-06 41.1 8.5 100 28-144 149-256 (345)
357 1rjw_A ADH-HT, alcohol dehydro 95.5 0.07 2.4E-06 40.9 8.4 97 30-144 160-262 (339)
358 1jvb_A NAD(H)-dependent alcoho 95.5 0.062 2.1E-06 41.4 8.0 101 29-145 165-273 (347)
359 4eez_A Alcohol dehydrogenase 1 95.5 0.16 5.6E-06 38.9 10.4 102 27-144 156-264 (348)
360 2hcy_A Alcohol dehydrogenase 1 95.5 0.063 2.2E-06 41.3 8.0 99 30-145 165-271 (347)
361 3fwz_A Inner membrane protein 95.4 0.18 6.1E-06 33.2 9.2 92 35-141 7-103 (140)
362 3jv7_A ADH-A; dehydrogenase, n 95.4 0.075 2.6E-06 40.8 8.4 99 31-146 168-273 (345)
363 1vj0_A Alcohol dehydrogenase, 95.4 0.036 1.2E-06 43.3 6.6 100 29-145 189-300 (380)
364 3tqh_A Quinone oxidoreductase; 95.4 0.13 4.3E-06 39.1 9.3 96 28-142 146-244 (321)
365 2eih_A Alcohol dehydrogenase; 95.3 0.11 3.9E-06 39.8 9.0 96 31-144 163-266 (343)
366 1yb5_A Quinone oxidoreductase; 95.3 0.083 2.8E-06 40.8 8.0 97 29-143 165-269 (351)
367 2cf5_A Atccad5, CAD, cinnamyl 95.2 0.054 1.8E-06 41.9 6.9 99 30-144 175-276 (357)
368 2b5w_A Glucose dehydrogenase; 95.2 0.067 2.3E-06 41.4 7.3 98 29-145 161-275 (357)
369 4dup_A Quinone oxidoreductase; 95.2 0.086 3E-06 40.7 7.9 100 28-145 161-267 (353)
370 1qor_A Quinone oxidoreductase; 95.1 0.078 2.7E-06 40.4 7.5 99 29-145 135-241 (327)
371 1yqd_A Sinapyl alcohol dehydro 94.9 0.053 1.8E-06 42.1 6.0 99 30-144 182-283 (366)
372 3krt_A Crotonyl COA reductase; 94.8 0.17 5.9E-06 40.5 9.0 97 30-144 224-345 (456)
373 2cdc_A Glucose dehydrogenase g 94.8 0.16 5.6E-06 39.3 8.6 93 35-145 181-280 (366)
374 1wly_A CAAR, 2-haloacrylate re 94.8 0.16 5.4E-06 38.8 8.4 99 29-145 140-246 (333)
375 2zig_A TTHA0409, putative modi 94.7 0.019 6.6E-07 43.3 3.0 56 88-143 20-97 (297)
376 3nx4_A Putative oxidoreductase 94.6 0.22 7.6E-06 37.8 8.9 92 37-145 149-243 (324)
377 3iht_A S-adenosyl-L-methionine 94.6 0.15 5.2E-06 34.1 6.7 106 25-142 32-146 (174)
378 3fbg_A Putative arginate lyase 94.6 0.19 6.6E-06 38.6 8.5 92 34-142 150-247 (346)
379 3ubt_Y Modification methylase 94.5 0.11 3.8E-06 39.6 7.0 72 36-119 1-74 (331)
380 2zb4_A Prostaglandin reductase 94.5 0.27 9.3E-06 37.9 9.2 100 28-144 152-261 (357)
381 2j8z_A Quinone oxidoreductase; 94.4 0.13 4.3E-06 39.8 7.2 99 29-145 157-263 (354)
382 3gaz_A Alcohol dehydrogenase s 94.4 0.16 5.3E-06 39.0 7.5 95 28-143 144-246 (343)
383 2vhw_A Alanine dehydrogenase; 94.3 0.023 7.8E-07 44.4 2.7 101 34-143 167-268 (377)
384 3llv_A Exopolyphosphatase-rela 94.2 0.49 1.7E-05 30.9 8.8 69 35-115 6-79 (141)
385 2vn8_A Reticulon-4-interacting 94.0 0.5 1.7E-05 36.7 9.8 95 32-143 181-280 (375)
386 2dq4_A L-threonine 3-dehydroge 94.0 0.029 9.8E-07 43.2 2.6 97 29-144 160-263 (343)
387 3p2y_A Alanine dehydrogenase/p 93.9 0.029 9.7E-07 43.8 2.5 42 34-77 183-225 (381)
388 3l9w_A Glutathione-regulated p 93.9 0.31 1.1E-05 38.5 8.4 94 35-143 4-102 (413)
389 3c85_A Putative glutathione-re 93.8 0.41 1.4E-05 32.9 8.2 93 35-142 39-138 (183)
390 1pjc_A Protein (L-alanine dehy 93.8 0.029 9.9E-07 43.6 2.4 100 35-143 167-267 (361)
391 2eez_A Alanine dehydrogenase; 93.7 0.036 1.2E-06 43.1 2.8 101 34-143 165-266 (369)
392 1tt7_A YHFP; alcohol dehydroge 93.6 0.34 1.2E-05 36.8 8.1 97 31-145 146-249 (330)
393 4dio_A NAD(P) transhydrogenase 93.5 0.041 1.4E-06 43.2 2.8 42 34-77 189-231 (405)
394 1iz0_A Quinone oxidoreductase; 93.4 0.09 3.1E-06 39.6 4.5 94 32-144 123-219 (302)
395 4a0s_A Octenoyl-COA reductase/ 93.4 0.39 1.3E-05 38.3 8.3 98 30-144 216-337 (447)
396 1boo_A Protein (N-4 cytosine-s 93.0 0.082 2.8E-06 40.4 3.7 57 88-144 13-85 (323)
397 1xa0_A Putative NADPH dependen 92.9 0.38 1.3E-05 36.5 7.3 97 30-144 144-247 (328)
398 2g1u_A Hypothetical protein TM 92.8 0.84 2.9E-05 30.4 8.2 95 33-141 17-116 (155)
399 3ggo_A Prephenate dehydrogenas 92.4 1.1 3.7E-05 34.0 9.2 90 35-140 33-125 (314)
400 1l7d_A Nicotinamide nucleotide 92.4 0.093 3.2E-06 41.1 3.4 42 34-77 171-213 (384)
401 3ius_A Uncharacterized conserv 92.4 2.5 8.4E-05 31.1 12.1 70 36-119 6-76 (286)
402 3me5_A Cytosine-specific methy 91.9 0.3 1E-05 39.4 5.8 76 36-119 89-182 (482)
403 1x13_A NAD(P) transhydrogenase 91.9 0.077 2.6E-06 41.8 2.3 42 34-77 171-213 (401)
404 3ce6_A Adenosylhomocysteinase; 91.7 0.55 1.9E-05 38.0 7.1 91 32-144 271-362 (494)
405 4eso_A Putative oxidoreductase 91.6 1 3.4E-05 32.8 8.0 102 34-143 7-138 (255)
406 3e48_A Putative nucleoside-dip 91.4 2.1 7.3E-05 31.5 9.8 70 37-117 2-76 (289)
407 1lss_A TRK system potassium up 90.9 2.1 7.2E-05 27.4 9.6 92 35-141 4-100 (140)
408 3r6d_A NAD-dependent epimerase 90.5 3.4 0.00011 29.0 12.6 95 37-143 7-107 (221)
409 3gqv_A Enoyl reductase; medium 90.4 1.7 5.8E-05 33.6 8.7 93 33-143 163-263 (371)
410 3pi7_A NADH oxidoreductase; gr 90.4 0.87 3E-05 34.9 6.9 91 36-144 166-264 (349)
411 3pxx_A Carveol dehydrogenase; 90.3 2.4 8.3E-05 31.2 9.2 105 34-143 9-153 (287)
412 3grk_A Enoyl-(acyl-carrier-pro 90.1 3.6 0.00012 30.6 9.9 106 34-144 30-170 (293)
413 2hwk_A Helicase NSP2; rossman 90.0 0.48 1.6E-05 35.2 4.8 97 43-147 150-258 (320)
414 1wma_A Carbonyl reductase [NAD 90.0 0.91 3.1E-05 33.1 6.6 104 34-142 3-137 (276)
415 3oig_A Enoyl-[acyl-carrier-pro 90.0 2.9 0.0001 30.4 9.3 108 34-144 6-148 (266)
416 3swr_A DNA (cytosine-5)-methyl 89.8 0.98 3.4E-05 39.9 7.4 74 35-119 540-631 (1002)
417 3ioy_A Short-chain dehydrogena 89.8 2.7 9.4E-05 31.7 9.2 81 34-117 7-98 (319)
418 1id1_A Putative potassium chan 89.6 3 0.0001 27.5 8.4 95 35-141 3-103 (153)
419 3d4o_A Dipicolinate synthase s 89.6 1 3.6E-05 33.6 6.7 89 33-142 153-243 (293)
420 3l4b_C TRKA K+ channel protien 89.4 2.3 8E-05 30.0 8.1 91 37-141 2-97 (218)
421 4a27_A Synaptic vesicle membra 89.2 1.1 3.9E-05 34.3 6.8 97 28-144 136-239 (349)
422 2f1k_A Prephenate dehydrogenas 89.1 3.1 0.00011 30.5 9.0 85 37-139 2-87 (279)
423 4dcm_A Ribosomal RNA large sub 89.0 4.4 0.00015 31.4 10.0 101 34-145 38-138 (375)
424 2km1_A Protein DRE2; yeast, an 88.9 0.42 1.4E-05 31.3 3.4 41 101-141 54-96 (136)
425 3ijr_A Oxidoreductase, short c 88.4 5.2 0.00018 29.6 9.8 105 34-143 46-182 (291)
426 2rir_A Dipicolinate synthase, 88.3 1.6 5.6E-05 32.7 7.0 90 33-143 155-246 (300)
427 4fgs_A Probable dehydrogenase 88.2 2.9 0.0001 30.9 8.1 102 34-143 28-159 (273)
428 3b1f_A Putative prephenate deh 88.1 3.3 0.00011 30.6 8.6 89 36-140 7-98 (290)
429 1g60_A Adenine-specific methyl 88.0 0.29 9.8E-06 36.0 2.6 54 89-142 4-73 (260)
430 3e8x_A Putative NAD-dependent 87.8 4.7 0.00016 28.6 9.0 74 34-118 20-96 (236)
431 2g5c_A Prephenate dehydrogenas 87.7 3.6 0.00012 30.3 8.5 89 37-140 3-93 (281)
432 2ew2_A 2-dehydropantoate 2-red 87.3 5 0.00017 29.9 9.2 98 36-141 4-106 (316)
433 4fs3_A Enoyl-[acyl-carrier-pro 87.2 6.4 0.00022 28.6 9.5 105 34-144 5-147 (256)
434 2aef_A Calcium-gated potassium 87.2 6.3 0.00022 28.0 9.7 92 34-142 8-104 (234)
435 1zsy_A Mitochondrial 2-enoyl t 87.1 5.9 0.0002 30.3 9.6 96 30-143 163-270 (357)
436 1ej6_A Lambda2; icosahedral, n 87.1 0.43 1.5E-05 41.9 3.3 94 32-137 819-918 (1289)
437 3k31_A Enoyl-(acyl-carrier-pro 86.9 5 0.00017 29.8 8.9 105 35-144 30-169 (296)
438 3is3_A 17BETA-hydroxysteroid d 86.9 5.2 0.00018 29.2 8.9 106 34-144 17-153 (270)
439 3abi_A Putative uncharacterize 86.7 0.49 1.7E-05 36.6 3.3 69 34-115 15-86 (365)
440 4g81_D Putative hexonate dehyd 86.6 4.9 0.00017 29.3 8.5 81 34-119 8-99 (255)
441 3edm_A Short chain dehydrogena 86.3 2.1 7.3E-05 31.1 6.5 105 34-143 7-143 (259)
442 4e21_A 6-phosphogluconate dehy 86.0 2 6.8E-05 33.2 6.4 89 35-140 22-112 (358)
443 4g65_A TRK system potassium up 86.0 1.6 5.6E-05 35.0 6.1 67 35-112 3-74 (461)
444 3ek2_A Enoyl-(acyl-carrier-pro 85.8 8.1 0.00028 27.9 9.6 107 33-144 12-154 (271)
445 3trk_A Nonstructural polyprote 85.8 0.39 1.3E-05 35.2 2.1 43 105-147 210-263 (324)
446 3r3s_A Oxidoreductase; structu 85.8 5.6 0.00019 29.5 8.7 106 34-144 48-186 (294)
447 3jyo_A Quinate/shikimate dehyd 85.7 1.5 5.3E-05 32.6 5.4 99 33-139 125-225 (283)
448 3v2g_A 3-oxoacyl-[acyl-carrier 85.6 5.8 0.0002 29.0 8.6 105 34-143 30-165 (271)
449 3nzo_A UDP-N-acetylglucosamine 85.4 2.4 8.3E-05 33.1 6.7 84 35-119 35-125 (399)
450 2h7i_A Enoyl-[acyl-carrier-pro 84.8 3.6 0.00012 30.0 7.1 104 34-144 6-149 (269)
451 1gu7_A Enoyl-[acyl-carrier-pro 84.8 3.6 0.00012 31.6 7.4 96 31-144 163-276 (364)
452 2gdz_A NAD+-dependent 15-hydro 84.7 4.2 0.00014 29.6 7.4 82 35-119 7-99 (267)
453 3ksu_A 3-oxoacyl-acyl carrier 84.6 8.1 0.00028 28.0 8.9 105 34-143 10-147 (262)
454 3hwr_A 2-dehydropantoate 2-red 84.6 6.6 0.00023 29.6 8.6 96 34-142 18-119 (318)
455 1xg5_A ARPG836; short chain de 84.3 6.5 0.00022 28.7 8.4 81 34-117 31-122 (279)
456 3gt0_A Pyrroline-5-carboxylate 84.0 1.4 4.9E-05 31.8 4.6 85 36-139 3-93 (247)
457 3g0o_A 3-hydroxyisobutyrate de 83.9 5.2 0.00018 29.9 7.7 88 35-140 7-99 (303)
458 3c24_A Putative oxidoreductase 83.8 5.5 0.00019 29.4 7.8 85 36-140 12-98 (286)
459 3mag_A VP39; methylated adenin 83.6 1.9 6.6E-05 32.1 4.9 37 34-70 60-99 (307)
460 1eg2_A Modification methylase 83.4 0.68 2.3E-05 35.2 2.7 54 90-143 39-106 (319)
461 1lnq_A MTHK channels, potassiu 83.1 7 0.00024 29.6 8.3 91 35-142 115-210 (336)
462 4ft4_B DNA (cytosine-5)-methyl 83.0 3 0.0001 35.9 6.8 45 35-79 212-260 (784)
463 1guz_A Malate dehydrogenase; o 82.9 13 0.00044 27.9 9.9 101 37-142 2-117 (310)
464 3i83_A 2-dehydropantoate 2-red 82.8 8.9 0.0003 28.9 8.7 96 36-142 3-104 (320)
465 3ic5_A Putative saccharopine d 82.7 5.1 0.00017 24.6 6.3 69 35-115 5-78 (118)
466 4e12_A Diketoreductase; oxidor 82.7 2.6 9E-05 31.2 5.6 98 36-140 5-118 (283)
467 3tri_A Pyrroline-5-carboxylate 82.3 5.4 0.00018 29.5 7.2 90 36-143 4-97 (280)
468 2i6t_A Ubiquitin-conjugating e 81.8 4.9 0.00017 30.2 6.8 97 34-141 13-123 (303)
469 2hmt_A YUAA protein; RCK, KTN, 81.7 3.7 0.00013 26.3 5.6 69 35-115 6-79 (144)
470 3i6i_A Putative leucoanthocyan 81.1 6 0.0002 30.0 7.3 88 36-131 11-108 (346)
471 3d1l_A Putative NADP oxidoredu 80.9 6.4 0.00022 28.6 7.1 88 35-141 10-100 (266)
472 1ldn_A L-lactate dehydrogenase 80.8 16 0.00054 27.5 11.0 104 34-142 5-122 (316)
473 3sx2_A Putative 3-ketoacyl-(ac 80.6 5.5 0.00019 29.1 6.8 81 34-119 12-115 (278)
474 3u5t_A 3-oxoacyl-[acyl-carrier 80.3 5.1 0.00017 29.3 6.4 105 34-143 26-161 (267)
475 3iyl_W VP1; non-enveloped viru 80.2 0.88 3E-05 40.3 2.4 92 35-138 828-926 (1299)
476 1g0o_A Trihydroxynaphthalene r 80.1 11 0.00037 27.7 8.2 104 35-143 29-163 (283)
477 1bg6_A N-(1-D-carboxylethyl)-L 79.9 5.8 0.0002 30.2 6.9 98 36-141 5-107 (359)
478 3dmg_A Probable ribosomal RNA 79.8 6.4 0.00022 30.6 7.1 104 24-144 36-140 (381)
479 3gvp_A Adenosylhomocysteinase 79.8 5.6 0.00019 31.6 6.6 88 33-142 218-306 (435)
480 4fn4_A Short chain dehydrogena 79.5 7.8 0.00027 28.3 7.1 78 34-116 6-94 (254)
481 3ucx_A Short chain dehydrogena 79.5 9.6 0.00033 27.6 7.7 78 34-116 10-98 (264)
482 4dll_A 2-hydroxy-3-oxopropiona 79.1 9.5 0.00033 28.7 7.7 89 34-140 30-121 (320)
483 3h2s_A Putative NADH-flavin re 78.8 14 0.00048 25.7 8.5 95 37-142 2-103 (224)
484 3qiv_A Short-chain dehydrogena 78.6 6.6 0.00023 28.2 6.5 78 34-116 8-96 (253)
485 4f6c_A AUSA reductase domain p 78.6 22 0.00075 27.8 10.8 82 35-117 69-161 (427)
486 3h7a_A Short chain dehydrogena 78.4 5.4 0.00019 28.8 6.0 79 34-117 6-94 (252)
487 3tjr_A Short chain dehydrogena 78.4 7.8 0.00027 28.8 7.0 79 34-117 30-119 (301)
488 1y6j_A L-lactate dehydrogenase 78.4 8.9 0.0003 29.0 7.3 101 35-142 7-122 (318)
489 2v6b_A L-LDH, L-lactate dehydr 78.4 19 0.00064 26.9 9.4 99 37-141 2-114 (304)
490 1h2b_A Alcohol dehydrogenase; 78.2 3.7 0.00013 31.5 5.3 98 30-145 182-287 (359)
491 4g65_A TRK system potassium up 78.0 5.1 0.00018 32.1 6.1 72 33-114 233-308 (461)
492 3f9i_A 3-oxoacyl-[acyl-carrier 77.6 9 0.00031 27.4 7.0 77 33-117 12-95 (249)
493 1gpj_A Glutamyl-tRNA reductase 77.3 8.7 0.0003 30.1 7.2 38 33-72 165-204 (404)
494 3av4_A DNA (cytosine-5)-methyl 76.9 8.5 0.00029 35.3 7.7 74 35-119 851-942 (1330)
495 3rkr_A Short chain oxidoreduct 76.8 6.9 0.00024 28.4 6.2 78 34-116 28-116 (262)
496 2dpo_A L-gulonate 3-dehydrogen 76.2 11 0.00038 28.5 7.3 97 36-140 7-120 (319)
497 3e9n_A Putative short-chain de 76.0 14 0.00047 26.3 7.6 73 35-117 5-86 (245)
498 4dkj_A Cytosine-specific methy 76.0 4.8 0.00017 31.6 5.4 44 36-79 11-58 (403)
499 3hn2_A 2-dehydropantoate 2-red 75.9 10 0.00034 28.5 7.0 98 36-141 3-101 (312)
500 3h9u_A Adenosylhomocysteinase; 75.4 7.1 0.00024 31.0 6.1 41 33-75 209-250 (436)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.96 E-value=2.6e-27 Score=177.13 Aligned_cols=183 Identities=16% Similarity=0.249 Sum_probs=133.1
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhC-CCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEE
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVG-SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAI 110 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v 110 (222)
.+|+.+|||+|||+|..+..+++.+. ++.+|+|+|+|+.|++.|++++...+.. .+++++++|+.++++ ++||+|
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~--~~v~~~~~D~~~~~~--~~~d~v 143 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAP--TPVDVIEGDIRDIAI--ENASMV 143 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCS--SCEEEEESCTTTCCC--CSEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccC--ceEEEeecccccccc--cccccc
Confidence 56889999999999999999998753 4568999999999999999987654332 589999999998875 459999
Q ss_pred EEcccccCccc--HHHHHHHHhcccCCCcEEEEEecCCCCCchhhH-HHHHHhhcccccccccCChhH-H-HHHhHHhHh
Q 027517 111 TMGYGLRNVVD--KRKALEESFRVLKPGSRISVLDFNKSTQPFTTA-IQEWMIDNVVVPVASGYGLAE-E-YQYLKSSIR 185 (222)
Q Consensus 111 ~~~~~l~~~~~--~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~ 185 (222)
+++++++++++ ...++++++++|||||.+++.+......+.... ...++..-. ...++.... . .........
T Consensus 144 ~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~---~~~g~s~~ei~~~~~~l~~~~ 220 (261)
T 4gek_A 144 VLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFK---RANGYSELEISQKRSMLENVM 220 (261)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHH---HHTTGGGSTTHHHHHHHHHHC
T ss_pred eeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHH---HHcCCCHHHHHHHHhhhcccc
Confidence 99999999964 457899999999999999999988766543222 111111100 000000000 0 011112334
Q ss_pred hcCCHHHHHHHHHHcCCeEEEEeeecCCeeeeEeeeC
Q 027517 186 EFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 222 (222)
Q Consensus 186 ~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~k 222 (222)
..+|.+++.++|+++||+.++++ +....+..++|+|
T Consensus 221 ~~~s~~~~~~~L~~AGF~~ve~~-fq~~nF~~~iA~K 256 (261)
T 4gek_A 221 LTDSVETHKARLHKAGFEHSELW-FQCFNFGSLVALK 256 (261)
T ss_dssp CCBCHHHHHHHHHHHTCSEEEEE-EEETTEEEEEEEC
T ss_pred cCCCHHHHHHHHHHcCCCeEEEE-EEeccEEEEEEEE
Confidence 56799999999999999999876 3444577788887
No 2
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.95 E-value=2.8e-26 Score=167.73 Aligned_cols=196 Identities=21% Similarity=0.213 Sum_probs=145.0
Q ss_pred hhHHHHhhhhcCcchhhHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhh
Q 027517 4 FSLKLQLNDLLSFGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVS 83 (222)
Q Consensus 4 ~~~yd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (222)
+..|+.............+...+.+.+...++ +|||+|||+|..+..+++. ++.+++++|+++.+++.++++....+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~ 90 (219)
T 3dlc_A 14 AKNMDEISKTLFAPIYPIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADAN 90 (219)
T ss_dssp HHHHHHHHHTTTTTHHHHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHhhccccHHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhcc
Confidence 34555555554444455556667777776666 9999999999999999987 46699999999999999999876544
Q ss_pred hhcCCCeeEEeCCCCCcCCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcc
Q 027517 84 KACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNV 163 (222)
Q Consensus 84 ~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~ 163 (222)
.. .++.+.+.|+.++++++++||+|+++.+++|++++..++++++++|+|||.+++.+...... .............
T Consensus 91 ~~--~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~-~~~~~~~~~~~~~ 167 (219)
T 3dlc_A 91 LN--DRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNKE-LRDSISAEMIRKN 167 (219)
T ss_dssp CT--TTEEEEECBTTBCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSHH-HHHHHHHHHHHHC
T ss_pred cc--CceEEEEcCHHHCCCCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcHH-HHHHHHHHHHHhH
Confidence 22 58999999999988888899999999999999999999999999999999999987654331 1111111111000
Q ss_pred cccccccCChhHHHHHhHHhHhhcCCHHHHHHHHHHcCCeEEEEeeecCCeee
Q 027517 164 VVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMG 216 (222)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~ 216 (222)
..+..........++.+++.++++++||+++++.....+.|.
T Consensus 168 -----------~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~ 209 (219)
T 3dlc_A 168 -----------PDWKEFNRKNISQENVERFQNVLDEIGISSYEIILGDEGFWI 209 (219)
T ss_dssp -----------TTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEEEEETTEEEE
T ss_pred -----------HHHHhhhhhccccCCHHHHHHHHHHcCCCeEEEEecCCceEE
Confidence 001111112234568899999999999999998877776653
No 3
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.95 E-value=6.6e-26 Score=167.56 Aligned_cols=206 Identities=16% Similarity=0.178 Sum_probs=143.6
Q ss_pred hHHHHhhhhcCcchhhHHHHHHHHhhC-CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhh
Q 027517 5 SLKLQLNDLLSFGQHRIWKRMAVSWSG-AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVS 83 (222)
Q Consensus 5 ~~yd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (222)
..||.............+ +.+...+. ..++.+|||+|||+|..+..+++.. ++.+++++|+|+.+++.++++....
T Consensus 15 ~~y~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~- 91 (234)
T 3dtn_A 15 GKYDEQRRKFIPCFDDFY-GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGN- 91 (234)
T ss_dssp HHHHHHHHHHCTTHHHHH-HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSC-
T ss_pred HHHHHhHHHhCcCHHHHH-HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccC-
Confidence 456665555444444444 44445444 4567899999999999999999985 6779999999999999999887433
Q ss_pred hhcCCCeeEEeCCCCCcCCCCCceeEEEEcccccCcccHH--HHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhh
Q 027517 84 KACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNVVDKR--KALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMID 161 (222)
Q Consensus 84 ~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~--~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~ 161 (222)
.++.+.++|+.+++++ ++||+|++..+++|+++.. .++++++++|||||.+++.+...+..............
T Consensus 92 ----~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~ 166 (234)
T 3dtn_A 92 ----LKVKYIEADYSKYDFE-EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWR 166 (234)
T ss_dssp ----TTEEEEESCTTTCCCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHH
T ss_pred ----CCEEEEeCchhccCCC-CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHH
Confidence 3899999999998776 7899999999999998655 59999999999999999999887665443222111111
Q ss_pred cccccccccCChhHHHHH-hHHhHhhcCCHHHHHHHHHHcCCeEEEEeeecCCeeeeEeee
Q 027517 162 NVVVPVASGYGLAEEYQY-LKSSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVAT 221 (222)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~ 221 (222)
..... ........... ......+.++.+++.++|+++||+++++...... ++.+.+.
T Consensus 167 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~-~~~~~~~ 224 (234)
T 3dtn_A 167 QYVEN--SGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAGFRDVSCIYKYYQ-FAVMFGR 224 (234)
T ss_dssp HHHHT--SSCCHHHHHTTC----CCCCCBHHHHHHHHHHTTCEEEEEEEEETT-EEEEEEE
T ss_pred HHHHh--cCCCHHHHHHHHHhcccccccCHHHHHHHHHHcCCCceeeeeeecc-eeEEEEE
Confidence 10000 11111110000 1113446789999999999999999998755443 4444443
No 4
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.94 E-value=4.3e-25 Score=161.58 Aligned_cols=166 Identities=24% Similarity=0.318 Sum_probs=136.9
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCC
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 103 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 103 (222)
..+++.+...++.+|||+|||+|.++..+++..++..+++++|+++.+++.++++....+. +++.+.+.|+.+++++
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~d~~~~~~~ 103 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL---KNVEVLKSEENKIPLP 103 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC---TTEEEEECBTTBCSSC
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEecccccCCCC
Confidence 3456666778888999999999999999999865667999999999999999998765443 4799999999998887
Q ss_pred CCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHh
Q 027517 104 DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSS 183 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (222)
+++||+|+++.++++++++..+++++.++|+|||.+++.++......... .
T Consensus 104 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~-----------------------------~ 154 (219)
T 3dh0_A 104 DNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGP-----------------------------P 154 (219)
T ss_dssp SSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSC-----------------------------C
T ss_pred CCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCC-----------------------------c
Confidence 78899999999999999999999999999999999999887765431110 1
Q ss_pred HhhcCCHHHHHHHHHHcCCeEEEEeeecCCeeeeEeeeC
Q 027517 184 IREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 222 (222)
Q Consensus 184 ~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~k 222 (222)
....++.+++.++++++||++++........+ .++++|
T Consensus 155 ~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~-~~~~~k 192 (219)
T 3dh0_A 155 PEEVYSEWEVGLILEDAGIRVGRVVEVGKYCF-GVYAMI 192 (219)
T ss_dssp GGGSCCHHHHHHHHHHTTCEEEEEEEETTTEE-EEEEEC
T ss_pred hhcccCHHHHHHHHHHCCCEEEEEEeeCCceE-EEEEEe
Confidence 12457899999999999999999887776544 444443
No 5
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.93 E-value=1e-24 Score=163.68 Aligned_cols=165 Identities=22% Similarity=0.319 Sum_probs=128.4
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCC
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 103 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 103 (222)
..+++.+...++.+|||+|||+|.++..+++.. .+++++|+|+.+++.++++....+. +++.+.++|+.+++++
T Consensus 27 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~---~~v~~~~~d~~~l~~~ 100 (260)
T 1vl5_A 27 AKLMQIAALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGH---QQVEYVQGDAEQMPFT 100 (260)
T ss_dssp HHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEECCC-CCCSC
T ss_pred HHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCC---CceEEEEecHHhCCCC
Confidence 345566667788899999999999999998773 4999999999999999988754332 4799999999998888
Q ss_pred CCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHh
Q 027517 104 DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSS 183 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (222)
+++||+|+++.+++|++++..++++++++|||||++++.+...+..+....+...... .....
T Consensus 101 ~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~ 163 (260)
T 1vl5_A 101 DERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEK-----------------ERDYS 163 (260)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHH-----------------HHCTT
T ss_pred CCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHH-----------------hcCcc
Confidence 8899999999999999999999999999999999999988766554332222111100 00011
Q ss_pred HhhcCCHHHHHHHHHHcCCeEEEEeeec
Q 027517 184 IREFLTGKDLEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 184 ~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 211 (222)
..+.++.+++.++++++||+++......
T Consensus 164 ~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 191 (260)
T 1vl5_A 164 HHRAWKKSDWLKMLEEAGFELEELHCFH 191 (260)
T ss_dssp CCCCCBHHHHHHHHHHHTCEEEEEEEEE
T ss_pred ccCCCCHHHHHHHHHHCCCeEEEEEEee
Confidence 2346789999999999999988776553
No 6
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.93 E-value=1.2e-24 Score=162.81 Aligned_cols=166 Identities=19% Similarity=0.102 Sum_probs=130.0
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 99 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 99 (222)
......+...+...++.+|||+|||+|..+..+++.+ +.+++++|+|+.+++.++++....+.. .++.+.++|+.+
T Consensus 22 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~--~~v~~~~~d~~~ 97 (256)
T 1nkv_A 22 EEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVS--ERVHFIHNDAAG 97 (256)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEESCCTT
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCC--cceEEEECChHh
Confidence 3444566777778889999999999999999999885 568999999999999999887654322 479999999998
Q ss_pred cCCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHH
Q 027517 100 LPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQY 179 (222)
Q Consensus 100 ~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (222)
+++ +++||+|++..+++|++++..++++++++|||||++++.+......+........+.
T Consensus 98 ~~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~------------------- 157 (256)
T 1nkv_A 98 YVA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACG------------------- 157 (256)
T ss_dssp CCC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTT-------------------
T ss_pred CCc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHh-------------------
Confidence 876 678999999999999999999999999999999999998765433222111111100
Q ss_pred hHHhHhhcCCHHHHHHHHHHcCCeEEEEeee
Q 027517 180 LKSSIREFLTGKDLEKLALEIGFSRAKHYEL 210 (222)
Q Consensus 180 ~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 210 (222)
......+++.+++.++++++||++++....
T Consensus 158 -~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 187 (256)
T 1nkv_A 158 -VSSTSDFLTLPGLVGAFDDLGYDVVEMVLA 187 (256)
T ss_dssp -CSCGGGSCCHHHHHHHHHTTTBCCCEEEEC
T ss_pred -cccccccCCHHHHHHHHHHCCCeeEEEEeC
Confidence 011235679999999999999999876543
No 7
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.93 E-value=3.6e-24 Score=161.04 Aligned_cols=161 Identities=20% Similarity=0.318 Sum_probs=130.8
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCC
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 103 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 103 (222)
..+++.+...++.+|||+|||+|..+..+++.+ +.+++++|+|+.+++.++++.... +++.+.+.|+.+++++
T Consensus 45 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~~~ 117 (266)
T 3ujc_A 45 KKILSDIELNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN-----NKIIFEANDILTKEFP 117 (266)
T ss_dssp HHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC-----TTEEEEECCTTTCCCC
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC-----CCeEEEECccccCCCC
Confidence 455666677788899999999999999999886 569999999999999999886543 4899999999998887
Q ss_pred CCceeEEEEcccccCc--ccHHHHHHHHhcccCCCcEEEEEecCCCCC-chhhHHHHHHhhcccccccccCChhHHHHHh
Q 027517 104 DCFFDAITMGYGLRNV--VDKRKALEESFRVLKPGSRISVLDFNKSTQ-PFTTAIQEWMIDNVVVPVASGYGLAEEYQYL 180 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~--~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (222)
+++||+|++..+++|+ +++..++++++++|||||.+++.++..... .....+... .
T Consensus 118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~---------------------~ 176 (266)
T 3ujc_A 118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEY---------------------V 176 (266)
T ss_dssp TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHH---------------------H
T ss_pred CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHH---------------------H
Confidence 8899999999999999 889999999999999999999998765541 111111111 1
Q ss_pred HHhHhhcCCHHHHHHHHHHcCCeEEEEeeecC
Q 027517 181 KSSIREFLTGKDLEKLALEIGFSRAKHYELSG 212 (222)
Q Consensus 181 ~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 212 (222)
.......++.+++.++++++||++++......
T Consensus 177 ~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 208 (266)
T 3ujc_A 177 KQRKYTLITVEEYADILTACNFKNVVSKDLSD 208 (266)
T ss_dssp HHHTCCCCCHHHHHHHHHHTTCEEEEEEECHH
T ss_pred hcCCCCCCCHHHHHHHHHHcCCeEEEEEeCCH
Confidence 11223467999999999999999998876653
No 8
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.93 E-value=2.4e-24 Score=162.27 Aligned_cols=164 Identities=20% Similarity=0.281 Sum_probs=128.7
Q ss_pred HHHHHhhC-CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC
Q 027517 24 RMAVSWSG-AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF 102 (222)
Q Consensus 24 ~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 102 (222)
..++..+. ..++.+|||+|||+|.++..+++. +..+++++|+|+.+++.++++....+.. +++.+.+.|+.++++
T Consensus 35 ~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~ 110 (267)
T 3kkz_A 35 LKALSFIDNLTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQ--NRVTGIVGSMDDLPF 110 (267)
T ss_dssp HHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEECCTTSCCC
T ss_pred HHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCC--cCcEEEEcChhhCCC
Confidence 34444444 667889999999999999999987 4569999999999999999987654432 579999999999887
Q ss_pred CCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHH
Q 027517 103 SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKS 182 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (222)
+.++||+|++..+++++ ++..+++++.++|||||.+++.++..............+. .
T Consensus 111 ~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~---------------------~ 168 (267)
T 3kkz_A 111 RNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWM---------------------D 168 (267)
T ss_dssp CTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHH---------------------H
T ss_pred CCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHH---------------------H
Confidence 77899999999999999 8899999999999999999998875332222222222111 1
Q ss_pred hHhhcCCHHHHHHHHHHcCCeEEEEeeecCC
Q 027517 183 SIREFLTGKDLEKLALEIGFSRAKHYELSGG 213 (222)
Q Consensus 183 ~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 213 (222)
....+.+.+++.++++++||++++....+..
T Consensus 169 ~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~ 199 (267)
T 3kkz_A 169 AYPEIDTIPNQVAKIHKAGYLPVATFILPEN 199 (267)
T ss_dssp HCTTCEEHHHHHHHHHHTTEEEEEEEECCGG
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEEECCHh
Confidence 1124568899999999999999998877643
No 9
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.92 E-value=2.7e-24 Score=157.39 Aligned_cols=162 Identities=20% Similarity=0.189 Sum_probs=123.3
Q ss_pred HHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCC
Q 027517 25 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 104 (222)
Q Consensus 25 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 104 (222)
.+++.+...++.+|||+|||+|.++..+++. +.+++++|+++.+++.++++.. .++.+.++|+.+++.+
T Consensus 36 ~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~d~~~~~~~- 104 (220)
T 3hnr_A 36 DILEDVVNKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP-------KEFSITEGDFLSFEVP- 104 (220)
T ss_dssp HHHHHHHHTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC-------TTCCEESCCSSSCCCC-
T ss_pred HHHHHhhccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC-------CceEEEeCChhhcCCC-
Confidence 3444444557889999999999999999876 4699999999999999998863 3799999999998877
Q ss_pred CceeEEEEcccccCcccHHH--HHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhH-
Q 027517 105 CFFDAITMGYGLRNVVDKRK--ALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLK- 181 (222)
Q Consensus 105 ~~~D~v~~~~~l~~~~~~~~--~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 181 (222)
++||+|++..+++|+++... ++++++++|||||.+++.++................... +....
T Consensus 105 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 171 (220)
T 3hnr_A 105 TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRG-------------FHQLAN 171 (220)
T ss_dssp SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTT-------------CHHHHH
T ss_pred CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCC-------------Cccchh
Confidence 88999999999999988766 999999999999999999876544333222222221100 11111
Q ss_pred -HhHhhcCCHHHHHHHHHHcCCeEEEEeee
Q 027517 182 -SSIREFLTGKDLEKLALEIGFSRAKHYEL 210 (222)
Q Consensus 182 -~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 210 (222)
.....+++.+++.++++++||+++.....
T Consensus 172 ~~~~~~~~~~~~~~~~l~~aGf~v~~~~~~ 201 (220)
T 3hnr_A 172 DLQTEYYTRIPVMQTIFENNGFHVTFTRLN 201 (220)
T ss_dssp HHHHSCCCBHHHHHHHHHHTTEEEEEEECS
T ss_pred hcchhhcCCHHHHHHHHHHCCCEEEEeecc
Confidence 11224568999999999999988776643
No 10
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.92 E-value=5.7e-24 Score=162.52 Aligned_cols=164 Identities=21% Similarity=0.175 Sum_probs=130.2
Q ss_pred HHHHHhh----CCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC
Q 027517 24 RMAVSWS----GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 99 (222)
Q Consensus 24 ~~~~~~~----~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 99 (222)
..+...+ ...++.+|||+|||+|..+..+++.+ +.+++++|+++.+++.++++....+.. +++.+.++|+.+
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~ 143 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLA--DNITVKYGSFLE 143 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCT--TTEEEEECCTTS
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCC--cceEEEEcCccc
Confidence 4555566 66788899999999999999999886 459999999999999999887554322 579999999999
Q ss_pred cCCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHH
Q 027517 100 LPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQY 179 (222)
Q Consensus 100 ~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (222)
+++++++||+|++..+++|++++..++++++++|||||.+++.++.............++..
T Consensus 144 ~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~------------------ 205 (297)
T 2o57_A 144 IPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDR------------------ 205 (297)
T ss_dssp CSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHH------------------
T ss_pred CCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHH------------------
Confidence 88888899999999999999999999999999999999999988765433222222221110
Q ss_pred hHHhHhhcCCHHHHHHHHHHcCCeEEEEeeec
Q 027517 180 LKSSIREFLTGKDLEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 180 ~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 211 (222)
.......+.+++.++++++||++++.....
T Consensus 206 --~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 235 (297)
T 2o57_A 206 --IKLHDMGSLGLYRSLAKECGLVTLRTFSRP 235 (297)
T ss_dssp --HTCSSCCCHHHHHHHHHHTTEEEEEEEECH
T ss_pred --hcCCCCCCHHHHHHHHHHCCCeEEEEEECc
Confidence 011135688999999999999999887654
No 11
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.92 E-value=4.8e-24 Score=158.05 Aligned_cols=164 Identities=24% Similarity=0.318 Sum_probs=130.0
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCC
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 103 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 103 (222)
..++..+...++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++....+. +++.+.++|+.+++++
T Consensus 11 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~~~ 84 (239)
T 1xxl_A 11 GLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGV---ENVRFQQGTAESLPFP 84 (239)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTC---CSEEEEECBTTBCCSC
T ss_pred chHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCC---CCeEEEecccccCCCC
Confidence 445667778889999999999999999998763 4899999999999999988754432 4799999999998887
Q ss_pred CCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHh
Q 027517 104 DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSS 183 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (222)
+++||+|++..+++|++++..++++++++|+|||.+++.+...+..+....+..... ......
T Consensus 85 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~ 147 (239)
T 1xxl_A 85 DDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLN-----------------RLRDPS 147 (239)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHH-----------------HHHCTT
T ss_pred CCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHH-----------------Hhcccc
Confidence 789999999999999999999999999999999999998877655433222211110 000011
Q ss_pred HhhcCCHHHHHHHHHHcCCeEEEEeee
Q 027517 184 IREFLTGKDLEKLALEIGFSRAKHYEL 210 (222)
Q Consensus 184 ~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 210 (222)
+.+.++.+++.++++++||++++....
T Consensus 148 ~~~~~~~~~~~~ll~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 148 HVRESSLSEWQAMFSANQLAYQDIQKW 174 (239)
T ss_dssp CCCCCBHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccCCCCHHHHHHHHHHCCCcEEEEEee
Confidence 234678999999999999998887765
No 12
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.92 E-value=1.3e-23 Score=158.69 Aligned_cols=170 Identities=25% Similarity=0.367 Sum_probs=131.8
Q ss_pred HHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC
Q 027517 22 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP 101 (222)
Q Consensus 22 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 101 (222)
....+.+.+...++.+|||+|||+|..+..+++.. +.+++++|+|+.+++.++++....+.. .++.+..+|+.+++
T Consensus 49 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~ 124 (273)
T 3bus_A 49 LTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLA--NRVTFSYADAMDLP 124 (273)
T ss_dssp HHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEECCTTSCC
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCC--cceEEEECccccCC
Confidence 33456666677788999999999999999999874 569999999999999999887544322 47999999999988
Q ss_pred CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhH
Q 027517 102 FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLK 181 (222)
Q Consensus 102 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (222)
+++++||+|++..+++|++++..++++++++|||||++++.++......... ...... .+. ..
T Consensus 125 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~-~~~~~~---------------~~~-~~ 187 (273)
T 3bus_A 125 FEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGA-KKEAVD---------------AFR-AG 187 (273)
T ss_dssp SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHH-HHHHHH---------------HHH-HH
T ss_pred CCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChh-HHHHHH---------------HHH-hh
Confidence 8778999999999999999999999999999999999999887654321111 101100 000 00
Q ss_pred HhHhhcCCHHHHHHHHHHcCCeEEEEeeecC
Q 027517 182 SSIREFLTGKDLEKLALEIGFSRAKHYELSG 212 (222)
Q Consensus 182 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 212 (222)
......++.+++.++++++||++++......
T Consensus 188 ~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~ 218 (273)
T 3bus_A 188 GGVLSLGGIDEYESDVRQAELVVTSTVDISA 218 (273)
T ss_dssp HTCCCCCCHHHHHHHHHHTTCEEEEEEECHH
T ss_pred cCccCCCCHHHHHHHHHHcCCeEEEEEECcH
Confidence 1123567999999999999999998876653
No 13
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.92 E-value=9.5e-24 Score=158.04 Aligned_cols=166 Identities=20% Similarity=0.306 Sum_probs=129.5
Q ss_pred HHHHHhh-CCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC
Q 027517 24 RMAVSWS-GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF 102 (222)
Q Consensus 24 ~~~~~~~-~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 102 (222)
..++..+ ...++.+|||+|||+|..+..+++.. + .+++++|+++.+++.++++....+.. .++.+.++|+.++++
T Consensus 35 ~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~-~-~~v~~vD~s~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~~ 110 (257)
T 3f4k_A 35 RKAVSFINELTDDAKIADIGCGTGGQTLFLADYV-K-GQITGIDLFPDFIEIFNENAVKANCA--DRVKGITGSMDNLPF 110 (257)
T ss_dssp HHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHC-C-SEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEECCTTSCSS
T ss_pred HHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhC-C-CeEEEEECCHHHHHHHHHHHHHcCCC--CceEEEECChhhCCC
Confidence 3444444 56678899999999999999999985 3 39999999999999999987654432 469999999998888
Q ss_pred CCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHH
Q 027517 103 SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKS 182 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (222)
++++||+|++..+++|+ ++..+++++.++|+|||++++.++..............+. .
T Consensus 111 ~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~---------------------~ 168 (257)
T 3f4k_A 111 QNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWM---------------------D 168 (257)
T ss_dssp CTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHH---------------------H
T ss_pred CCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHH---------------------H
Confidence 77899999999999999 7899999999999999999998865322222222211111 1
Q ss_pred hHhhcCCHHHHHHHHHHcCCeEEEEeeecCCee
Q 027517 183 SIREFLTGKDLEKLALEIGFSRAKHYELSGGLM 215 (222)
Q Consensus 183 ~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~ 215 (222)
....+.+.+++.++++++||++++....+...|
T Consensus 169 ~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~w 201 (257)
T 3f4k_A 169 AYPEISVIPTCIDKMERAGYTPTAHFILPENCW 201 (257)
T ss_dssp HCTTCCBHHHHHHHHHHTTEEEEEEEECCGGGT
T ss_pred hCCCCCCHHHHHHHHHHCCCeEEEEEECChhhH
Confidence 112356899999999999999999887765443
No 14
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.92 E-value=1.8e-24 Score=165.92 Aligned_cols=179 Identities=16% Similarity=0.181 Sum_probs=132.9
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEE
Q 027517 31 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAI 110 (222)
Q Consensus 31 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v 110 (222)
...++.+|||+|||+|..+..++....++.+++++|+++.+++.++++....+.. .++.++++|+.+++++ ++||+|
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~-~~fD~v 191 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALA--GQITLHRQDAWKLDTR-EGYDLL 191 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTG--GGEEEEECCGGGCCCC-SCEEEE
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCC--CceEEEECchhcCCcc-CCeEEE
Confidence 3467889999999999999988533346779999999999999999987654332 4599999999998877 889999
Q ss_pred EEcccccCcccHHH---HHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhH----H--H-HHh
Q 027517 111 TMGYGLRNVVDKRK---ALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAE----E--Y-QYL 180 (222)
Q Consensus 111 ~~~~~l~~~~~~~~---~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~-~~~ 180 (222)
+++.+++|++++.. ++++++++|||||.+++.++..+...... ..|... ...... . + ...
T Consensus 192 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~--~~w~~~--------~~~~~~~~~~~~~~~~~~ 261 (305)
T 3ocj_A 192 TSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPD--SPWDMQ--------AIDPHDLQLQQLVFTRLI 261 (305)
T ss_dssp ECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTT--CCCCGG--------GSCHHHHHHHHHHHHHTT
T ss_pred EECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCccccc--ccceee--------ccccchhhhhhhHHHHHH
Confidence 99999999987655 79999999999999999887654322110 000000 000000 0 0 000
Q ss_pred HHhHhhcCCHHHHHHHHHHcCCeEEEEeeecCCeeeeEeeeC
Q 027517 181 KSSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 222 (222)
Q Consensus 181 ~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~k 222 (222)
......+++.+++.++++++||+++++.....+.+..++|+|
T Consensus 262 ~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~~~~~v~a~K 303 (305)
T 3ocj_A 262 QPRWNALRTHAQTRAQLEEAGFTDLRFEDDRARLFPTVIARK 303 (305)
T ss_dssp CCSCCCCCCHHHHHHHHHHTTCEEEEEECCTTSSSCEEEEEC
T ss_pred hhhhhccCCHHHHHHHHHHCCCEEEEEEcccCceeeEEEEec
Confidence 111224579999999999999999999988888888888886
No 15
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.92 E-value=1.6e-23 Score=155.38 Aligned_cols=150 Identities=25% Similarity=0.354 Sum_probs=122.0
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
+++.+|||+|||+|..+..+++. +.+++++|+++.+++.++++.. ..++.++++|+.++++++++||+|++
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~~~fD~v~~ 122 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERGE------GPDLSFIKGDLSSLPFENEQFEAIMA 122 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTTC------BTTEEEEECBTTBCSSCTTCEEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhcc------cCCceEEEcchhcCCCCCCCccEEEE
Confidence 46789999999999999999876 4589999999999999998752 15899999999998887889999999
Q ss_pred cccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcCCHHH
Q 027517 113 GYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKD 192 (222)
Q Consensus 113 ~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (222)
..+++|++++..+++++.++|+|||.+++.++..............+. .......+++++
T Consensus 123 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~ 182 (242)
T 3l8d_A 123 INSLEWTEEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYG--------------------KDVVCNTMMPWE 182 (242)
T ss_dssp ESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGT--------------------CCCSSCCCCHHH
T ss_pred cChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhcc--------------------ccccccCCCHHH
Confidence 999999999999999999999999999999876654333222211111 001224578999
Q ss_pred HHHHHHHcCCeEEEEeeec
Q 027517 193 LEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 193 ~~~~l~~~Gf~~~~~~~~~ 211 (222)
+.++++++||++++.....
T Consensus 183 ~~~~l~~~Gf~~~~~~~~~ 201 (242)
T 3l8d_A 183 FEQLVKEQGFKVVDGIGVY 201 (242)
T ss_dssp HHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHcCCEEEEeeccc
Confidence 9999999999999877553
No 16
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.92 E-value=6.1e-23 Score=161.21 Aligned_cols=174 Identities=15% Similarity=0.092 Sum_probs=134.5
Q ss_pred HHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCC
Q 027517 25 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 104 (222)
Q Consensus 25 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 104 (222)
.+.+.....+..+|||+|||+|.++..+++.+ ++.+++++|+ +.+++.++++....+. .+++++..+|+.+ +.+.
T Consensus 193 ~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l--~~~v~~~~~d~~~-~~p~ 267 (369)
T 3gwz_A 193 QVAAAYDFSGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGL--ADRCEILPGDFFE-TIPD 267 (369)
T ss_dssp HHHHHSCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTC--TTTEEEEECCTTT-CCCS
T ss_pred HHHHhCCCccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCc--CCceEEeccCCCC-CCCC
Confidence 44455566678899999999999999999985 6779999999 9999999988754332 2589999999983 4454
Q ss_pred CceeEEEEcccccCcccHH--HHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHH
Q 027517 105 CFFDAITMGYGLRNVVDKR--KALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKS 182 (222)
Q Consensus 105 ~~~D~v~~~~~l~~~~~~~--~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (222)
.||+|++.+++|++++.. ++++++++.|+|||++++.+...+...... ..+.. ......
T Consensus 268 -~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~--~~~~d----------------~~~~~~ 328 (369)
T 3gwz_A 268 -GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAAS--TLFVD----------------LLLLVL 328 (369)
T ss_dssp -SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH--HHHHH----------------HHHHHH
T ss_pred -CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc--hhHhh----------------HHHHhh
Confidence 799999999999998764 799999999999999999998766543221 11111 111111
Q ss_pred hHhhcCCHHHHHHHHHHcCCeEEEEeeecCCeeeeEeeeC
Q 027517 183 SIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 222 (222)
Q Consensus 183 ~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~k 222 (222)
.....++.++|.++++++||+++++.....+...++.|+|
T Consensus 329 ~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 329 VGGAERSESEFAALLEKSGLRVERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp HSCCCBCHHHHHHHHHTTTEEEEEEEECSSSSEEEEEEEE
T ss_pred cCCccCCHHHHHHHHHHCCCeEEEEEECCCCCcEEEEEEe
Confidence 2235679999999999999999999876666677777764
No 17
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.92 E-value=1.1e-23 Score=159.39 Aligned_cols=173 Identities=22% Similarity=0.337 Sum_probs=129.2
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 99 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 99 (222)
+.+...+.......++.+|||+|||+|.++..+++. .++.+++++|+++.+++.++++....+. +++.+...|+.+
T Consensus 23 ~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~d~~~ 98 (276)
T 3mgg_A 23 ETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKN-NPDAEITSIDISPESLEKARENTEKNGI---KNVKFLQANIFS 98 (276)
T ss_dssp CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHH-CTTSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEECCGGG
T ss_pred HHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEccccc
Confidence 344444444555678889999999999999999988 4677999999999999999998765433 479999999999
Q ss_pred cCCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCch---hhHHHHHHhhcccccccccCChhHH
Q 027517 100 LPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPF---TTAIQEWMIDNVVVPVASGYGLAEE 176 (222)
Q Consensus 100 ~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (222)
+++++++||+|++..+++|++++..++++++++|||||.+++.+........ ......++. ..
T Consensus 99 ~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~--------------~~ 164 (276)
T 3mgg_A 99 LPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWN--------------CL 164 (276)
T ss_dssp CCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHH--------------HH
T ss_pred CCCCCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHH--------------HH
Confidence 8887789999999999999999999999999999999999998765322110 011111110 00
Q ss_pred HHHhHHhHhhcCCHHHHHHHHHHcCCeEEEEeee
Q 027517 177 YQYLKSSIREFLTGKDLEKLALEIGFSRAKHYEL 210 (222)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 210 (222)
...........++..++.++|+++||++++....
T Consensus 165 ~~~~~~~~~~~~~~~~l~~~l~~aGf~~v~~~~~ 198 (276)
T 3mgg_A 165 IRVQAYMKGNSLVGRQIYPLLQESGFEKIRVEPR 198 (276)
T ss_dssp HHHHHHTTCCTTGGGGHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHhcCCCcchHHHHHHHHHHCCCCeEEEeeE
Confidence 0011111123457789999999999999887754
No 18
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.91 E-value=4.6e-24 Score=154.29 Aligned_cols=142 Identities=15% Similarity=0.110 Sum_probs=119.0
Q ss_pred CCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEEcc
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGY 114 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~ 114 (222)
+.+|||+|||+|.++..+++. +.+++++|+++.+++.++++. +++.++++|+.++++++++||+|++..
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~~fD~v~~~~ 110 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQTH--------PSVTFHHGTITDLSDSPKRWAGLLAWY 110 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHHC--------TTSEEECCCGGGGGGSCCCEEEEEEES
T ss_pred CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC--------CCCeEEeCcccccccCCCCeEEEEehh
Confidence 779999999999999999876 459999999999999999874 589999999999887778999999999
Q ss_pred cccCcc--cHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcCCHHH
Q 027517 115 GLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKD 192 (222)
Q Consensus 115 ~l~~~~--~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (222)
+++|++ ++..++++++++|+|||.+++.++......... .. ......++.++
T Consensus 111 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~---------------~~-----------~~~~~~~~~~~ 164 (203)
T 3h2b_A 111 SLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMY---------------HP-----------VATAYRWPLPE 164 (203)
T ss_dssp SSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEEC---------------CS-----------SSCEEECCHHH
T ss_pred hHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhh---------------ch-----------hhhhccCCHHH
Confidence 999996 889999999999999999999887765411100 00 00124678999
Q ss_pred HHHHHHHcCCeEEEEeeecCC
Q 027517 193 LEKLALEIGFSRAKHYELSGG 213 (222)
Q Consensus 193 ~~~~l~~~Gf~~~~~~~~~~~ 213 (222)
+.++++++||++++.......
T Consensus 165 ~~~~l~~~Gf~~~~~~~~~~~ 185 (203)
T 3h2b_A 165 LAQALETAGFQVTSSHWDPRF 185 (203)
T ss_dssp HHHHHHHTTEEEEEEEECTTS
T ss_pred HHHHHHHCCCcEEEEEecCCC
Confidence 999999999999998887763
No 19
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.91 E-value=3.3e-23 Score=159.34 Aligned_cols=162 Identities=16% Similarity=0.166 Sum_probs=127.8
Q ss_pred HHHHhhC-CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCC
Q 027517 25 MAVSWSG-AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 103 (222)
Q Consensus 25 ~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 103 (222)
.+++.+. ..++.+|||+|||+|.++..+++.. +.+|+++|+++.+++.++++....+.. .++.+.++|+.+++++
T Consensus 107 ~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~ 182 (312)
T 3vc1_A 107 FLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRID--DHVRSRVCNMLDTPFD 182 (312)
T ss_dssp HHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEECCTTSCCCC
T ss_pred HHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCC--CceEEEECChhcCCCC
Confidence 3555555 6788899999999999999999875 468999999999999999987654432 4799999999998887
Q ss_pred CCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCc-hhhHHHHHHhhcccccccccCChhHHHHHhHH
Q 027517 104 DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQP-FTTAIQEWMIDNVVVPVASGYGLAEEYQYLKS 182 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (222)
+++||+|++..+++|+ ++..+++++.++|||||++++.++...... .......+.. ..
T Consensus 183 ~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~--------------------~~ 241 (312)
T 3vc1_A 183 KGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQIN--------------------AH 241 (312)
T ss_dssp TTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHH--------------------HH
T ss_pred CCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHH--------------------hh
Confidence 7899999999999999 589999999999999999999886654322 1111111111 00
Q ss_pred hHhhcCCHHHHHHHHHHcCCeEEEEeeec
Q 027517 183 SIREFLTGKDLEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 183 ~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 211 (222)
.....++.+++.++++++||++++...+.
T Consensus 242 ~~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 270 (312)
T 3vc1_A 242 FECNIHSRREYLRAMADNRLVPHTIVDLT 270 (312)
T ss_dssp HTCCCCBHHHHHHHHHTTTEEEEEEEECH
T ss_pred hcCCCCCHHHHHHHHHHCCCEEEEEEeCC
Confidence 11246789999999999999999988764
No 20
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.91 E-value=6e-23 Score=149.91 Aligned_cols=170 Identities=19% Similarity=0.226 Sum_probs=119.9
Q ss_pred HHHhhC-CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCC
Q 027517 26 AVSWSG-AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 104 (222)
Q Consensus 26 ~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 104 (222)
+...+. ..++.+|||+|||+|.++..+++. +.+++++|+++.+++.+++. + ..++.+.++|+.++ .+.
T Consensus 37 ~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~~----~---~~~~~~~~~d~~~~-~~~ 105 (218)
T 3ou2_A 37 ALERLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGRH----G---LDNVEFRQQDLFDW-TPD 105 (218)
T ss_dssp HHHHHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGGG----C---CTTEEEEECCTTSC-CCS
T ss_pred HHHHHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHhc----C---CCCeEEEecccccC-CCC
Confidence 344443 567789999999999999999987 45999999999999999882 1 15899999999887 667
Q ss_pred CceeEEEEcccccCcccH--HHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHH
Q 027517 105 CFFDAITMGYGLRNVVDK--RKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKS 182 (222)
Q Consensus 105 ~~~D~v~~~~~l~~~~~~--~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (222)
++||+|+++.+++|+++. ..++++++++|+|||.+++.++..+............... ..........+ .
T Consensus 106 ~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~ 177 (218)
T 3ou2_A 106 RQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVA----VRRTLQDGRSF----R 177 (218)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CE----EEEECTTSCEE----E
T ss_pred CceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccc----eeeecCCcchh----h
Confidence 889999999999999875 8999999999999999999998874433222111111100 00000000000 0
Q ss_pred hHhhcCCHHHHHHHHHHcCCeEEEEeeecCCe
Q 027517 183 SIREFLTGKDLEKLALEIGFSRAKHYELSGGL 214 (222)
Q Consensus 183 ~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~ 214 (222)
....+++++++.++++++||++..........
T Consensus 178 ~~~~~~~~~~~~~~l~~aGf~v~~~~~~~~~~ 209 (218)
T 3ou2_A 178 IVKVFRSPAELTERLTALGWSCSVDEVHPGFL 209 (218)
T ss_dssp EECCCCCHHHHHHHHHHTTEEEEEEEEETTEE
T ss_pred HhhcCCCHHHHHHHHHHCCCEEEeeeccccce
Confidence 12346799999999999999966655444333
No 21
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.91 E-value=3.6e-23 Score=153.44 Aligned_cols=169 Identities=15% Similarity=0.235 Sum_probs=124.8
Q ss_pred hHHHHhhhhcCcchhhHHHHHHHHhh-CCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhh
Q 027517 5 SLKLQLNDLLSFGQHRIWKRMAVSWS-GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVS 83 (222)
Q Consensus 5 ~~yd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (222)
..|..+...+........ ..+...+ ...++.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++
T Consensus 12 ~~y~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~----- 82 (240)
T 3dli_A 12 DYYFLFEEKFRGSRELVK-ARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK----- 82 (240)
T ss_dssp CHHHHHHHHHTCCHHHHH-HHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT-----
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh-----
Confidence 455555554433333332 3333333 3456789999999999999998876 45899999999999998764
Q ss_pred hhcCCCeeEEeCCCCCc--CCCCCceeEEEEcccccCcc--cHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHH
Q 027517 84 KACYKNIEWVEGDALDL--PFSDCFFDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWM 159 (222)
Q Consensus 84 ~~~~~~i~~~~~d~~~~--~~~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~ 159 (222)
+.+...|+.+. ++++++||+|++..+++|++ +...++++++++|||||.+++..+..... .....++
T Consensus 83 ------~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~---~~~~~~~ 153 (240)
T 3dli_A 83 ------FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSL---YSLINFY 153 (240)
T ss_dssp ------SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSH---HHHHHHT
T ss_pred ------cceeeccHHHHhhhcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchh---HHHHHHh
Confidence 57888888774 66778999999999999998 45999999999999999999987764321 1111111
Q ss_pred hhcccccccccCChhHHHHHhHHhHhhcCCHHHHHHHHHHcCCeEEEEeeec
Q 027517 160 IDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 211 (222)
....+...++.+++.++++++||++++...+.
T Consensus 154 --------------------~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 185 (240)
T 3dli_A 154 --------------------IDPTHKKPVHPETLKFILEYLGFRDVKIEFFE 185 (240)
T ss_dssp --------------------TSTTCCSCCCHHHHHHHHHHHTCEEEEEEEEC
T ss_pred --------------------cCccccccCCHHHHHHHHHHCCCeEEEEEEec
Confidence 01122356789999999999999999887665
No 22
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.91 E-value=3.1e-23 Score=155.66 Aligned_cols=159 Identities=17% Similarity=0.225 Sum_probs=124.9
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 99 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 99 (222)
..+.+.+.+.+...++.+|||+|||+|.++..+++ ++.+++|+|+|+.+++.++++. ++.+.+.|+.+
T Consensus 20 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~---------~~~~~~~d~~~ 87 (261)
T 3ege_A 20 IRIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP---------QVEWFTGYAEN 87 (261)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT---------TEEEECCCTTS
T ss_pred HHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc---------CCEEEECchhh
Confidence 45667777888778889999999999999999986 4679999999999999888763 89999999999
Q ss_pred cCCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHH
Q 027517 100 LPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQY 179 (222)
Q Consensus 100 ~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (222)
+++++++||+|++..+++|++++..++++++++|| ||++++.++....... .|.. . .. ...
T Consensus 88 ~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~-----~~~~-~----------~~--~~~ 148 (261)
T 3ege_A 88 LALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQR-----IWLY-D----------YF--PFL 148 (261)
T ss_dssp CCSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCC-----CGGG-G----------TC--HHH
T ss_pred CCCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHH-----HHHH-H----------HH--HHH
Confidence 88888899999999999999999999999999999 9999888876422110 0000 0 00 001
Q ss_pred hHHhHhhcCCHHHHHHHHHHcCCeEEEEeee
Q 027517 180 LKSSIREFLTGKDLEKLALEIGFSRAKHYEL 210 (222)
Q Consensus 180 ~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 210 (222)
.......+.+.+++. +++++||++++...+
T Consensus 149 ~~~~~~~~~~~~~~~-~l~~aGF~~v~~~~~ 178 (261)
T 3ege_A 149 WEDALRFLPLDEQIN-LLQENTKRRVEAIPF 178 (261)
T ss_dssp HHHHHTSCCHHHHHH-HHHHHHCSEEEEEEC
T ss_pred hhhhhhhCCCHHHHH-HHHHcCCCceeEEEe
Confidence 112234566788899 999999998887665
No 23
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.91 E-value=4.2e-23 Score=154.24 Aligned_cols=113 Identities=16% Similarity=0.186 Sum_probs=98.6
Q ss_pred HHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCC
Q 027517 25 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 104 (222)
Q Consensus 25 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 104 (222)
.+...+...++.+|||+|||+|..+..+++.. . .+++++|+++.+++.++++.. ..++.+.++|+.++++++
T Consensus 35 ~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~-~-~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~ 106 (253)
T 3g5l_A 35 ELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHG-A-KKVLGIDLSERMLTEAKRKTT------SPVVCYEQKAIEDIAIEP 106 (253)
T ss_dssp HHHTTCCCCTTCEEEEETCTTCHHHHHHHHTT-C-SEEEEEESCHHHHHHHHHHCC------CTTEEEEECCGGGCCCCT
T ss_pred HHHHhhhccCCCEEEEECCCCCHHHHHHHHcC-C-CEEEEEECCHHHHHHHHHhhc------cCCeEEEEcchhhCCCCC
Confidence 44555566678899999999999999998872 2 289999999999999998864 158999999999988877
Q ss_pred CceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 105 CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 105 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
++||+|++..+++|++++..++++++++|||||.+++...+
T Consensus 107 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 107 DAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 89999999999999999999999999999999999987554
No 24
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=1.3e-22 Score=151.96 Aligned_cols=163 Identities=16% Similarity=0.110 Sum_probs=123.2
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCC
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 103 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 103 (222)
..++..+...++.+|||+|||+|..+..+++.+ ++.+++++|+|+.+++.++++. +++.+.+.|+.+++ +
T Consensus 23 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~--------~~~~~~~~d~~~~~-~ 92 (259)
T 2p35_A 23 RDLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADRL--------PNTNFGKADLATWK-P 92 (259)
T ss_dssp HHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHHS--------TTSEEEECCTTTCC-C
T ss_pred HHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhC--------CCcEEEECChhhcC-c
Confidence 455666666778899999999999999999886 5679999999999999998873 58999999999877 6
Q ss_pred CCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHh
Q 027517 104 DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSS 183 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (222)
+++||+|+++.+++|++++..++++++++|+|||.+++.++.....+....+............ .......
T Consensus 93 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 163 (259)
T 2p35_A 93 AQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDA---------FSGGGLR 163 (259)
T ss_dssp SSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGG---------C------
T ss_pred cCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHH---------hcccccc
Confidence 6789999999999999999999999999999999999988765443332222222211000000 0000012
Q ss_pred HhhcCCHHHHHHHHHHcCCeEE
Q 027517 184 IREFLTGKDLEKLALEIGFSRA 205 (222)
Q Consensus 184 ~~~~~~~~~~~~~l~~~Gf~~~ 205 (222)
...+++.+++.++|+++||++.
T Consensus 164 ~~~~~~~~~~~~~l~~aGf~v~ 185 (259)
T 2p35_A 164 RKPLPPPSDYFNALSPKSSRVD 185 (259)
T ss_dssp -CCCCCHHHHHHHHGGGEEEEE
T ss_pred ccCCCCHHHHHHHHHhcCCceE
Confidence 3457899999999999999753
No 25
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.90 E-value=3.7e-22 Score=154.93 Aligned_cols=174 Identities=16% Similarity=0.157 Sum_probs=129.5
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCC
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 103 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 103 (222)
..+.+.+...+ .+|||+|||+|..+..+++.+ ++.+++++|+ +.+++.++++....+.. .++++..+|+.+ +.+
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~-~~~ 231 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLLAG--ERVSLVGGDMLQ-EVP 231 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHHHT--TSEEEEESCTTT-CCC
T ss_pred HHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcCCC--CcEEEecCCCCC-CCC
Confidence 34445555556 899999999999999999985 6679999999 99999999887544322 589999999987 454
Q ss_pred CCceeEEEEcccccCcccHH--HHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhH
Q 027517 104 DCFFDAITMGYGLRNVVDKR--KALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLK 181 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~~~~~--~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (222)
++||+|++..++|++++.. .+++++++.|+|||++++.+...+..... ....... .....
T Consensus 232 -~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~-~~~~~~~----------------~~~~~ 293 (334)
T 2ip2_A 232 -SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPS-PMSVLWD----------------VHLFM 293 (334)
T ss_dssp -SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCC-HHHHHHH----------------HHHHH
T ss_pred -CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCc-chhHHhh----------------hHhHh
Confidence 5799999999999997654 89999999999999999998765432211 1111110 00111
Q ss_pred HhHhhcCCHHHHHHHHHHcCCeEEEEeeecCCeeeeEeeeC
Q 027517 182 SSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 222 (222)
Q Consensus 182 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~k 222 (222)
......++.++|.++++++||+++++..... ...++.++|
T Consensus 294 ~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~-~~~~i~~~~ 333 (334)
T 2ip2_A 294 ACAGRHRTTEEVVDLLGRGGFAVERIVDLPM-ETRMIVAAR 333 (334)
T ss_dssp HHSCCCCBHHHHHHHHHHTTEEEEEEEEETT-TEEEEEEEE
T ss_pred hCCCcCCCHHHHHHHHHHCCCceeEEEECCC-CCEEEEEEe
Confidence 1112456899999999999999999887654 456777764
No 26
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.90 E-value=6.4e-23 Score=152.68 Aligned_cols=160 Identities=18% Similarity=0.157 Sum_probs=119.1
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEE
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 111 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~ 111 (222)
..++.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++.. .++.+.++|+.++ .++++||+|+
T Consensus 40 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~-------~~v~~~~~d~~~~-~~~~~fD~v~ 108 (250)
T 2p7i_A 40 FFRPGNLLELGSFKGDFTSRLQEH---FNDITCVEASEEAISHAQGRLK-------DGITYIHSRFEDA-QLPRRYDNIV 108 (250)
T ss_dssp GCCSSCEEEESCTTSHHHHHHTTT---CSCEEEEESCHHHHHHHHHHSC-------SCEEEEESCGGGC-CCSSCEEEEE
T ss_pred hcCCCcEEEECCCCCHHHHHHHHh---CCcEEEEeCCHHHHHHHHHhhh-------CCeEEEEccHHHc-CcCCcccEEE
Confidence 356779999999999999999875 3489999999999999998862 2789999999887 4567899999
Q ss_pred EcccccCcccHHHHHHHHh-cccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcCCH
Q 027517 112 MGYGLRNVVDKRKALEESF-RVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTG 190 (222)
Q Consensus 112 ~~~~l~~~~~~~~~l~~~~-~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (222)
+.++++|++++..++++++ ++|||||++++.++........ . .... ..... ...... ......+.+.++.
T Consensus 109 ~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~--~-~~~~-~~~~~---~~~~~~--~~~~~~~~~~~~~ 179 (250)
T 2p7i_A 109 LTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPNANAVSRQ--I-AVKM-GIISH---NSAVTE--AEFAHGHRCTYAL 179 (250)
T ss_dssp EESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHH--H-HHHT-TSSSS---TTCCCH--HHHHTTCCCCCCH
T ss_pred EhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHH--H-HHHc-Ccccc---chhccc--ccccccccccCCH
Confidence 9999999999999999999 9999999999988765432111 1 0000 00000 000000 0011223457899
Q ss_pred HHHHHHHHHcCCeEEEEeeec
Q 027517 191 KDLEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 191 ~~~~~~l~~~Gf~~~~~~~~~ 211 (222)
+++.++++++||++++.....
T Consensus 180 ~~~~~~l~~~Gf~~~~~~~~~ 200 (250)
T 2p7i_A 180 DTLERDASRAGLQVTYRSGIF 200 (250)
T ss_dssp HHHHHHHHHTTCEEEEEEEEE
T ss_pred HHHHHHHHHCCCeEEEEeeeE
Confidence 999999999999999876543
No 27
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.90 E-value=9.5e-23 Score=158.08 Aligned_cols=164 Identities=18% Similarity=0.083 Sum_probs=126.3
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEE
Q 027517 31 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAI 110 (222)
Q Consensus 31 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v 110 (222)
...+..+|||+|||+|..+..+++.+ ++.+++++|+ +.+++.++++....+.. +++++..+|+.+ +.+. +||+|
T Consensus 166 ~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~-~~p~-~~D~v 239 (332)
T 3i53_A 166 DWAALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDTGLS--GRAQVVVGSFFD-PLPA-GAGGY 239 (332)
T ss_dssp CCGGGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCT--TTEEEEECCTTS-CCCC-SCSEE
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhcCcC--cCeEEecCCCCC-CCCC-CCcEE
Confidence 34456799999999999999999985 6779999999 99999999887543322 589999999973 4444 79999
Q ss_pred EEcccccCcccH--HHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcC
Q 027517 111 TMGYGLRNVVDK--RKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFL 188 (222)
Q Consensus 111 ~~~~~l~~~~~~--~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (222)
++.+++|++++. .++++++++.|+|||++++.+...+.. ....... ...+.....+.+
T Consensus 240 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~-~~~~~~d-------------------~~~~~~~~~~~~ 299 (332)
T 3i53_A 240 VLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE-HAGTGMD-------------------LRMLTYFGGKER 299 (332)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC----CCHHHH-------------------HHHHHHHSCCCC
T ss_pred EEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC-CccHHHH-------------------HHHHhhCCCCCC
Confidence 999999999874 889999999999999999998876553 1100000 111111223567
Q ss_pred CHHHHHHHHHHcCCeEEEEeeecCCeeeeEeeeC
Q 027517 189 TGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 222 (222)
Q Consensus 189 ~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~k 222 (222)
+.++|.++++++||+++++..... ..++.+++
T Consensus 300 t~~e~~~ll~~aGf~~~~~~~~~~--~~vie~r~ 331 (332)
T 3i53_A 300 SLAELGELAAQAGLAVRAAHPISY--VSIVEMTA 331 (332)
T ss_dssp CHHHHHHHHHHTTEEEEEEEECSS--SEEEEEEE
T ss_pred CHHHHHHHHHHCCCEEEEEEECCC--cEEEEEee
Confidence 999999999999999999987765 66777664
No 28
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.90 E-value=3.2e-22 Score=156.06 Aligned_cols=174 Identities=17% Similarity=0.165 Sum_probs=131.0
Q ss_pred HHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCC
Q 027517 25 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 104 (222)
Q Consensus 25 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 104 (222)
.+++....++..+|+|+|||+|..+..+++.+ |+.+++.+|. |.+++.++++..... .+++++..+|+.+.+.+
T Consensus 170 ~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~~~~---~~rv~~~~gD~~~~~~~- 243 (353)
T 4a6d_A 170 SVLTAFDLSVFPLMCDLGGGAGALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFSFQE---EEQIDFQEGDFFKDPLP- 243 (353)
T ss_dssp HHHHSSCGGGCSEEEEETCTTSHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSCC-----CCSEEEEESCTTTSCCC-
T ss_pred HHHHhcCcccCCeEEeeCCCCCHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhhhcc---cCceeeecCccccCCCC-
Confidence 34444555677899999999999999999995 7789999997 889999988765332 26899999999875543
Q ss_pred CceeEEEEcccccCcccH--HHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHH
Q 027517 105 CFFDAITMGYGLRNVVDK--RKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKS 182 (222)
Q Consensus 105 ~~~D~v~~~~~l~~~~~~--~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (222)
.+|++++..++|++++. .++|+++++.|+|||+++|.+...++..........+. ..++..
T Consensus 244 -~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~d----------------l~ml~~ 306 (353)
T 4a6d_A 244 -EADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYS----------------LNMLVQ 306 (353)
T ss_dssp -CCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHH----------------HHHHHS
T ss_pred -CceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHH----------------HHHHHh
Confidence 47999999999999765 67899999999999999999987654322222211111 111111
Q ss_pred hHhhcCCHHHHHHHHHHcCCeEEEEeeecCCeeeeEeeeC
Q 027517 183 SIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 222 (222)
Q Consensus 183 ~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~k 222 (222)
.....+|.+||+++++++||+++++.+. ++.+.+++|+|
T Consensus 307 ~~g~ert~~e~~~ll~~AGf~~v~v~~~-~~~~~~i~ArK 345 (353)
T 4a6d_A 307 TEGQERTPTHYHMLLSSAGFRDFQFKKT-GAIYDAILARK 345 (353)
T ss_dssp SSCCCCCHHHHHHHHHHHTCEEEEEECC-SSSCEEEEEEC
T ss_pred CCCcCCCHHHHHHHHHHCCCceEEEEEc-CCceEEEEEEe
Confidence 1124579999999999999999998865 45667899988
No 29
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.90 E-value=3.3e-23 Score=145.70 Aligned_cols=150 Identities=17% Similarity=0.208 Sum_probs=122.6
Q ss_pred HHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCC
Q 027517 26 AVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDC 105 (222)
Q Consensus 26 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 105 (222)
+++.+...++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++. +++.+...| .+++++
T Consensus 9 ~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~--------~~v~~~~~d---~~~~~~ 74 (170)
T 3i9f_A 9 YLPNIFEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEKF--------DSVITLSDP---KEIPDN 74 (170)
T ss_dssp THHHHHSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHHC--------TTSEEESSG---GGSCTT
T ss_pred HHHhcCcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHhC--------CCcEEEeCC---CCCCCC
Confidence 3344556778899999999999999999774 38999999999999999872 589999999 555677
Q ss_pred ceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHh
Q 027517 106 FFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIR 185 (222)
Q Consensus 106 ~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (222)
+||+|++..+++|++++..+++++++.|+|||.+++.++......... ...
T Consensus 75 ~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~-----------------------------~~~ 125 (170)
T 3i9f_A 75 SVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKENTGIGP-----------------------------PLS 125 (170)
T ss_dssp CEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSS-----------------------------CGG
T ss_pred ceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCccccccCc-----------------------------hHh
Confidence 899999999999999999999999999999999999987765432111 112
Q ss_pred hcCCHHHHHHHHHHcCCeEEEEeeecCCeeeeEee
Q 027517 186 EFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVA 220 (222)
Q Consensus 186 ~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~ 220 (222)
..++.+++.++++ ||++++........+.++..
T Consensus 126 ~~~~~~~~~~~l~--Gf~~~~~~~~~~~~~~l~~~ 158 (170)
T 3i9f_A 126 IRMDEKDYMGWFS--NFVVEKRFNPTPYHFGLVLK 158 (170)
T ss_dssp GCCCHHHHHHHTT--TEEEEEEECSSTTEEEEEEE
T ss_pred hhcCHHHHHHHHh--CcEEEEccCCCCceEEEEEe
Confidence 3578999999998 99999999888766655543
No 30
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.90 E-value=4e-22 Score=156.16 Aligned_cols=177 Identities=12% Similarity=0.146 Sum_probs=132.1
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCC
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 103 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 103 (222)
..+++.+...++.+|||+|||+|..+..+++.+ ++.+++++|+ +.+++.++++....+.. .++++..+|+.+.+++
T Consensus 180 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~ 255 (359)
T 1x19_A 180 QLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKGVA--DRMRGIAVDIYKESYP 255 (359)
T ss_dssp HHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCT--TTEEEEECCTTTSCCC
T ss_pred HHHHHhcCCCCCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcCCC--CCEEEEeCccccCCCC
Confidence 345555666778899999999999999999985 6779999999 99999999887644321 4699999999887655
Q ss_pred CCceeEEEEcccccCccc--HHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhH
Q 027517 104 DCFFDAITMGYGLRNVVD--KRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLK 181 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~~~--~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (222)
+ +|+|++..++|++++ ...++++++++|+|||++++.+...+.... .....++ .........
T Consensus 256 ~--~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~-~~~~~~~--~~~~~~~~g----------- 319 (359)
T 1x19_A 256 E--ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPEN-PNFDYLS--HYILGAGMP----------- 319 (359)
T ss_dssp C--CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTS-CCHHHHH--HHGGGGGSS-----------
T ss_pred C--CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCC-chHHHHH--HHHHhcCCC-----------
Confidence 3 499999999999987 788999999999999999999877654311 1111111 110000000
Q ss_pred HhHhhcCCHHHHHHHHHHcCCeEEEEeeecCCeeeeEeeeC
Q 027517 182 SSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 222 (222)
Q Consensus 182 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~k 222 (222)
.....+++.++|.++++++||+++++.... ...+++++|
T Consensus 320 ~~~~~~~t~~e~~~ll~~aGf~~v~~~~~~--~~~vi~a~k 358 (359)
T 1x19_A 320 FSVLGFKEQARYKEILESLGYKDVTMVRKY--DHLLVQAVK 358 (359)
T ss_dssp CCCCCCCCGGGHHHHHHHHTCEEEEEEEET--TEEEEEEEC
T ss_pred CcccCCCCHHHHHHHHHHCCCceEEEEecC--CceEEEEeC
Confidence 001134799999999999999999988876 466777776
No 31
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.90 E-value=1.6e-22 Score=150.10 Aligned_cols=177 Identities=19% Similarity=0.221 Sum_probs=123.1
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCC
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 103 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 103 (222)
..+...+...++.+|||+|||+|..+..+++. + ..+++++|+++.+++.++++... .++.+.+.|+.+++++
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~d~~~~~~~ 104 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH-G-ASYVLGLDLSEKMLARARAAGPD------TGITYERADLDKLHLP 104 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHTSCS------SSEEEEECCGGGCCCC
T ss_pred HHHHHhccccCCCEEEEEcCcCCHHHHHHHHC-C-CCeEEEEcCCHHHHHHHHHhccc------CCceEEEcChhhccCC
Confidence 34566666677889999999999999999876 2 22899999999999999987632 3789999999988777
Q ss_pred CCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhc-c--cccccccCCh-hHHHHH
Q 027517 104 DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDN-V--VVPVASGYGL-AEEYQY 179 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~-~~~~~~ 179 (222)
.++||+|++..+++|++++..++++++++|+|||.+++.+.+....... ...|.... . ..+....... .....+
T Consensus 105 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (243)
T 3bkw_A 105 QDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPA--RPGWAIDAEGRRTWPIDRYLVEGPRKTDW 182 (243)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCS--SCSCEECTTSCEEEEECCTTCCEEECTTH
T ss_pred CCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCCcccccCc--CcceeecCCCceEEeecccccccceeeee
Confidence 7889999999999999999999999999999999999977542100000 00000000 0 0000000000 000001
Q ss_pred hH-HhHhhcCCHHHHHHHHHHcCCeEEEEeee
Q 027517 180 LK-SSIREFLTGKDLEKLALEIGFSRAKHYEL 210 (222)
Q Consensus 180 ~~-~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 210 (222)
.. ......++.+++.++|+++||++++..+.
T Consensus 183 ~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 183 LAKGVVKHHRTVGTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp HHHSCCEEECCHHHHHHHHHHTTCEEEEEEEC
T ss_pred ccCceEEEeccHHHHHHHHHHcCCEeeeeccC
Confidence 11 11123468999999999999999988765
No 32
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.90 E-value=4e-22 Score=154.78 Aligned_cols=175 Identities=15% Similarity=0.222 Sum_probs=130.0
Q ss_pred HHHHhhCC--CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC
Q 027517 25 MAVSWSGA--KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF 102 (222)
Q Consensus 25 ~~~~~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 102 (222)
.+++.+.. .++.+|||+|||+|..+..+++.+ ++.+++++|++ .+++.++++....+.. .++++..+|+.+.+.
T Consensus 154 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~ 229 (335)
T 2r3s_A 154 LIAQLVNENKIEPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGVA--SRYHTIAGSAFEVDY 229 (335)
T ss_dssp HHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTCG--GGEEEEESCTTTSCC
T ss_pred HHHHhcccccCCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCCC--cceEEEecccccCCC
Confidence 44445555 677899999999999999999985 66799999999 9999999887554322 479999999988666
Q ss_pred CCCceeEEEEcccccCccc--HHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHh
Q 027517 103 SDCFFDAITMGYGLRNVVD--KRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYL 180 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~~~~--~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (222)
+. .||+|++.+++|++++ ...+++++++.|+|||++++.+...+...........+. ....
T Consensus 230 ~~-~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~----------------~~~~ 292 (335)
T 2r3s_A 230 GN-DYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFS----------------LVML 292 (335)
T ss_dssp CS-CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHH----------------HHHH
T ss_pred CC-CCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHH----------------HHHH
Confidence 54 4999999999999954 579999999999999999999887654322111111111 0000
Q ss_pred H-HhHhhcCCHHHHHHHHHHcCCeEEEEeeecCCeeeeEeee
Q 027517 181 K-SSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVAT 221 (222)
Q Consensus 181 ~-~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~ 221 (222)
. ......++.++|.++++++||+++++....+.. .+++++
T Consensus 293 ~~~~~~~~~t~~~~~~ll~~aGf~~~~~~~~~~~~-~~i~~~ 333 (335)
T 2r3s_A 293 ATTPNGDAYTFAEYESMFSNAGFSHSQLHSLPTTQ-QQVIVA 333 (335)
T ss_dssp HHSSSCCCCCHHHHHHHHHHTTCSEEEEECCTTSS-SEEEEE
T ss_pred eeCCCCCcCCHHHHHHHHHHCCCCeeeEEECCCCc-eeEEEe
Confidence 0 012356799999999999999999988776543 444443
No 33
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.90 E-value=2.4e-22 Score=153.88 Aligned_cols=165 Identities=14% Similarity=0.173 Sum_probs=127.3
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCC
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 103 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 103 (222)
..+++.+...++.+|||+|||+|..+..+++.++ .+|+++|+|+.+++.++++....+.. .++.+..+|+.++
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~--- 134 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSP--RRKEVRIQGWEEF--- 134 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCS--SCEEEEECCGGGC---
T ss_pred HHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCC--CceEEEECCHHHc---
Confidence 3455666778889999999999999999998863 68999999999999999987654322 4799999999876
Q ss_pred CCceeEEEEcccccCcccH---------HHHHHHHhcccCCCcEEEEEecCCCCCchhhHH-----------HHHHhhcc
Q 027517 104 DCFFDAITMGYGLRNVVDK---------RKALEESFRVLKPGSRISVLDFNKSTQPFTTAI-----------QEWMIDNV 163 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~~~~---------~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~-----------~~~~~~~~ 163 (222)
+++||+|++..+++|++++ ..+++++.++|||||.+++.++..+........ ..|+...
T Consensus 135 ~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 213 (302)
T 3hem_A 135 DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTE- 213 (302)
T ss_dssp CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHH-
T ss_pred CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHh-
Confidence 5789999999999999654 799999999999999999998876543221110 0111100
Q ss_pred cccccccCChhHHHHHhHHhHhhcCCHHHHHHHHHHcCCeEEEEeeecCC
Q 027517 164 VVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELSGG 213 (222)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 213 (222)
. .......+.+++.++++++||++++.......
T Consensus 214 ----------------~-~p~~~~~s~~~~~~~l~~aGf~~~~~~~~~~~ 246 (302)
T 3hem_A 214 ----------------I-FPGGRLPRISQVDYYSSNAGWKVERYHRIGAN 246 (302)
T ss_dssp ----------------T-CTTCCCCCHHHHHHHHHHHTCEEEEEEECGGG
T ss_pred ----------------c-CCCCCCCCHHHHHHHHHhCCcEEEEEEeCchh
Confidence 0 01123568999999999999999998776544
No 34
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.90 E-value=4.3e-23 Score=156.81 Aligned_cols=165 Identities=19% Similarity=0.184 Sum_probs=120.7
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-CCCCceeEEEE
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-FSDCFFDAITM 112 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~v~~ 112 (222)
++.+|||+|||+|.++..+++. +.+++++|+++.+++.++++....+.. +++.++++|+.+++ +++++||+|++
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~fD~v~~ 142 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVS--DNMQFIHCAAQDVASHLETPVDLILF 142 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCG--GGEEEEESCGGGTGGGCSSCEEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCC--cceEEEEcCHHHhhhhcCCCceEEEE
Confidence 3679999999999999999876 569999999999999999987654322 47899999999876 56788999999
Q ss_pred cccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcCCHHH
Q 027517 113 GYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKD 192 (222)
Q Consensus 113 ~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (222)
..+++|++++..++++++++|||||.+++.++..............+. ......... ..........+++++
T Consensus 143 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~~~~~~~~~~~~~~~ 214 (285)
T 4htf_A 143 HAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFD-YVQAGMPKK-------KKRTLSPDYPRDPTQ 214 (285)
T ss_dssp ESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHH-HHHTTCCCC-----------CCCSCCBCHHH
T ss_pred CchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHH-HHhhhcccc-------ccccCCCCCCCCHHH
Confidence 999999999999999999999999999998776432111111100000 000000000 000011235679999
Q ss_pred HHHHHHHcCCeEEEEeeec
Q 027517 193 LEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 193 ~~~~l~~~Gf~~~~~~~~~ 211 (222)
+.++++++||++++.....
T Consensus 215 l~~~l~~aGf~v~~~~~~~ 233 (285)
T 4htf_A 215 VYLWLEEAGWQIMGKTGVR 233 (285)
T ss_dssp HHHHHHHTTCEEEEEEEES
T ss_pred HHHHHHHCCCceeeeeeEE
Confidence 9999999999999887664
No 35
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.90 E-value=6.2e-23 Score=152.51 Aligned_cols=191 Identities=16% Similarity=0.109 Sum_probs=129.9
Q ss_pred hhhHHHHHHHHhhCCC--CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeC
Q 027517 18 QHRIWKRMAVSWSGAK--TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEG 95 (222)
Q Consensus 18 ~~~~~~~~~~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 95 (222)
....+...+.+.+... ++.+|||+|||+|..+..+++. +.+++++|+++.+++.++++....+ .++.+.+.
T Consensus 19 ~~~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~----~~~~~~~~ 91 (246)
T 1y8c_A 19 DYKKWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQG----LKPRLACQ 91 (246)
T ss_dssp CHHHHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTT----CCCEEECC
T ss_pred cHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcC----CCeEEEec
Confidence 3444555565555433 6789999999999999999876 4589999999999999998875432 37899999
Q ss_pred CCCCcCCCCCceeEEEEcc-cccCc---ccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccc------
Q 027517 96 DALDLPFSDCFFDAITMGY-GLRNV---VDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVV------ 165 (222)
Q Consensus 96 d~~~~~~~~~~~D~v~~~~-~l~~~---~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~------ 165 (222)
|+.+++++ ++||+|++.. +++|+ ++...++++++++|+|||.+++....... ...........
T Consensus 92 d~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~------~~~~~~~~~~~~~~~~~ 164 (246)
T 1y8c_A 92 DISNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYK------LSQVLGNNDFNYDDDEV 164 (246)
T ss_dssp CGGGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHH------HHTTTTTCCEEEEETTE
T ss_pred ccccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHH------HHhhcCcceEEecCCcE
Confidence 99987766 7899999998 99999 56789999999999999999886543210 00000000000
Q ss_pred --cccc---------cCC----hhHHHHHh-HHhHhhcCCHHHHHHHHHHcCCeEEEEeeec-------CCeeeeEeeeC
Q 027517 166 --PVAS---------GYG----LAEEYQYL-KSSIREFLTGKDLEKLALEIGFSRAKHYELS-------GGLMGNLVATR 222 (222)
Q Consensus 166 --~~~~---------~~~----~~~~~~~~-~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~-------~~~~~~~~~~k 222 (222)
.+.. ... ....++.. .....+.++.+++.++|+++||++++..... .....+++|+|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~~~~~~~~~~varK 244 (246)
T 1y8c_A 165 FYYWENQFEDDLVSMYISFFVRDGEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDCYSNKKVEKFTERITYLVKL 244 (246)
T ss_dssp EEEEEEEEETTEEEEEEEEEEECSSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEESSSSCBCCTTCSEEEEEEEE
T ss_pred EEEEecccCCceEEEEEEEEEecCCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcccccCcCCCCceeEEEEEEe
Confidence 0000 000 00000000 0122467899999999999999999987552 12334677765
No 36
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.90 E-value=2.1e-22 Score=157.37 Aligned_cols=174 Identities=17% Similarity=0.186 Sum_probs=129.5
Q ss_pred HHHhhCCCC-CCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-CC
Q 027517 26 AVSWSGAKT-GDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-FS 103 (222)
Q Consensus 26 ~~~~~~~~~-~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~ 103 (222)
+++.+...+ +.+|||+|||+|.++..+++.+ ++.+++++|+ +.+++.++++....+.. .++++..+|+.+.+ +.
T Consensus 170 ~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~ 245 (352)
T 3mcz_A 170 VVSELGVFARARTVIDLAGGHGTYLAQVLRRH-PQLTGQIWDL-PTTRDAARKTIHAHDLG--GRVEFFEKNLLDARNFE 245 (352)
T ss_dssp HHHTCGGGTTCCEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCG--GGEEEEECCTTCGGGGT
T ss_pred HHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhC-CCCeEEEEEC-HHHHHHHHHHHHhcCCC--CceEEEeCCcccCcccC
Confidence 444444555 7899999999999999999985 6679999999 88999999887544322 47999999998865 13
Q ss_pred CCceeEEEEcccccCcccH--HHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhH
Q 027517 104 DCFFDAITMGYGLRNVVDK--RKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLK 181 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (222)
.+.||+|++..++|++++. ..++++++++|+|||++++.+...+..........+.. .....
T Consensus 246 ~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~----------------~~~~~ 309 (352)
T 3mcz_A 246 GGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFS----------------LHMMV 309 (352)
T ss_dssp TCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHH----------------HHHHH
T ss_pred CCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhh----------------HHHHh
Confidence 3569999999999999764 89999999999999999999887655422111111111 00000
Q ss_pred -HhHhhcCCHHHHHHHHHHcCCeEEEEeeecCCeeeeEeeeC
Q 027517 182 -SSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 222 (222)
Q Consensus 182 -~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~k 222 (222)
......++.++|.++++++||++++.. .+.+.+++|+|
T Consensus 310 ~~~~~~~~t~~e~~~ll~~aGf~~~~~~---~g~~~l~~a~k 348 (352)
T 3mcz_A 310 NTNHGELHPTPWIAGVVRDAGLAVGERS---IGRYTLLIGQR 348 (352)
T ss_dssp HSTTCCCCCHHHHHHHHHHTTCEEEEEE---ETTEEEEEEEC
T ss_pred hCCCCCcCCHHHHHHHHHHCCCceeeec---cCceEEEEEec
Confidence 112346799999999999999999843 34577888876
No 37
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.90 E-value=9.6e-23 Score=160.78 Aligned_cols=159 Identities=26% Similarity=0.363 Sum_probs=123.6
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhh-----hcCCCeeEEeCCCCCc------
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK-----ACYKNIEWVEGDALDL------ 100 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~d~~~~------ 100 (222)
..++.+|||+|||+|..+..+++.++++.+|+++|+|+.+++.++++...... ...+++.++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 45778999999999999999999876777999999999999999998754311 1115899999999987
Q ss_pred CCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHh
Q 027517 101 PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYL 180 (222)
Q Consensus 101 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (222)
++++++||+|+++.++++++++..++++++++|||||++++.++............. ....
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~-------------------~~~~ 221 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQD-------------------PILY 221 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHC-------------------HHHH
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhh-------------------HHHh
Confidence 777789999999999999999999999999999999999998776543211111000 0001
Q ss_pred HHhHhhcCCHHHHHHHHHHcCCeEEEEee
Q 027517 181 KSSIREFLTGKDLEKLALEIGFSRAKHYE 209 (222)
Q Consensus 181 ~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 209 (222)
.......++.+++.++|+++||+++++..
T Consensus 222 ~~~~~~~~~~~~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 222 GECLGGALYLEDFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp HTTCTTCCBHHHHHHHHHHTTCCCEEEEE
T ss_pred hcccccCCCHHHHHHHHHHCCCceEEEEe
Confidence 11123457889999999999999876554
No 38
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.90 E-value=3.5e-22 Score=151.89 Aligned_cols=172 Identities=16% Similarity=0.150 Sum_probs=124.6
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCC
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 103 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 103 (222)
..+++.+...++.+|||+|||+|..+..+++.. +.+++++|+|+.+++.++++....+.. .++.+...|+.+++
T Consensus 54 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvd~s~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~-- 127 (287)
T 1kpg_A 54 DLALGKLGLQPGMTLLDVGCGWGATMMRAVEKY--DVNVVGLTLSKNQANHVQQLVANSENL--RSKRVLLAGWEQFD-- 127 (287)
T ss_dssp HHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTCCCC--SCEEEEESCGGGCC--
T ss_pred HHHHHHcCCCCcCEEEEECCcccHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCC--CCeEEEECChhhCC--
Confidence 345555667788899999999999999999775 359999999999999999887543321 47999999998765
Q ss_pred CCceeEEEEcccccCc--ccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhH
Q 027517 104 DCFFDAITMGYGLRNV--VDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLK 181 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~--~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (222)
++||+|++..+++|+ +++..+++++.++|||||.+++.++.......... ... +. .........++.
T Consensus 128 -~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~-------~~~-~~--~~~~~~~~~~~~ 196 (287)
T 1kpg_A 128 -EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHE-------RGL-PM--SFTFARFLKFIV 196 (287)
T ss_dssp -CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTT-------TTC-SC--HHHHHHHHHHHH
T ss_pred -CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCcccccc-------ccc-cc--cccccchhhhHH
Confidence 689999999999999 67899999999999999999998877644221000 000 00 000000000000
Q ss_pred H---hHhhcCCHHHHHHHHHHcCCeEEEEeeecC
Q 027517 182 S---SIREFLTGKDLEKLALEIGFSRAKHYELSG 212 (222)
Q Consensus 182 ~---~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 212 (222)
. .....++.+++.++++++||++++......
T Consensus 197 ~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~~~ 230 (287)
T 1kpg_A 197 TEIFPGGRLPSIPMVQECASANGFTVTRVQSLQP 230 (287)
T ss_dssp HHTSTTCCCCCHHHHHHHHHTTTCEEEEEEECHH
T ss_pred heeCCCCCCCCHHHHHHHHHhCCcEEEEEEeCcH
Confidence 0 112356899999999999999999876543
No 39
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.90 E-value=5.4e-23 Score=154.47 Aligned_cols=177 Identities=20% Similarity=0.229 Sum_probs=121.6
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
+++.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++. +++.++++|+.+++. +++||+|++
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~-~~~fD~v~~ 116 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRN--------PDAVLHHGDMRDFSL-GRRFSAVTC 116 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHC--------TTSEEEECCTTTCCC-SCCEEEEEE
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhC--------CCCEEEECChHHCCc-cCCcCEEEE
Confidence 45679999999999999999866 458999999999999999875 478999999999876 578999999
Q ss_pred cc-cccCcc---cHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHh---------------hcccccccccCCh
Q 027517 113 GY-GLRNVV---DKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMI---------------DNVVVPVASGYGL 173 (222)
Q Consensus 113 ~~-~l~~~~---~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~ 173 (222)
.. +++|++ +...++++++++|+|||.+++.++..+............. +.........+..
T Consensus 117 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (263)
T 3pfg_A 117 MFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLV 196 (263)
T ss_dssp CTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred cCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEE
Confidence 98 999995 5678899999999999999997654433211100000000 0000000000000
Q ss_pred h---HHHH-HhHHhHhhcCCHHHHHHHHHHcCCeEEEEeeecCCeeeeEeeeC
Q 027517 174 A---EEYQ-YLKSSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 222 (222)
Q Consensus 174 ~---~~~~-~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~k 222 (222)
. ..+. .......+.++.+++.++|+++||+++++.....+ ..+++|+|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~-~~~~va~K 248 (263)
T 3pfg_A 197 AGPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPGGPSG-RGLFTGLP 248 (263)
T ss_dssp EETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTS-SCEEEEEE
T ss_pred ecCCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCC-ceeEEEec
Confidence 0 0000 00112245789999999999999999998755543 44667665
No 40
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.90 E-value=2e-22 Score=153.05 Aligned_cols=111 Identities=21% Similarity=0.294 Sum_probs=98.4
Q ss_pred hCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeE
Q 027517 30 SGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDA 109 (222)
Q Consensus 30 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~ 109 (222)
....++.+|||+|||+|.++..+++.++.+.+++++|+|+.+++.++++....+ .++.+.+.|+.+++++ ++||+
T Consensus 18 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~----~~v~~~~~d~~~~~~~-~~fD~ 92 (284)
T 3gu3_A 18 WKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP----YDSEFLEGDATEIELN-DKYDI 92 (284)
T ss_dssp SCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS----SEEEEEESCTTTCCCS-SCEEE
T ss_pred hccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC----CceEEEEcchhhcCcC-CCeeE
Confidence 356678899999999999999999886445799999999999999999875443 3799999999998774 68999
Q ss_pred EEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 110 ITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 110 v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
|++..+++++++...++++++++|||||++++.++.
T Consensus 93 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 93 AICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 999999999999999999999999999999998876
No 41
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.90 E-value=1.7e-22 Score=158.36 Aligned_cols=172 Identities=17% Similarity=0.150 Sum_probs=128.3
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc--CCCCCceeEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL--PFSDCFFDAI 110 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~D~v 110 (222)
.+..+|||||||+|..+..+++.+ ++.+++++|+ +.+++.++++....+.. +++++..+|+.+. +++ ++||+|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~p-~~~D~v 252 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLSGS--ERIHGHGANLLDRDVPFP-TGFDAV 252 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCTTG--GGEEEEECCCCSSSCCCC-CCCSEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcCcc--cceEEEEccccccCCCCC-CCcCEE
Confidence 456799999999999999999985 6779999999 99999999887543322 4799999999885 355 679999
Q ss_pred EEcccccCcccH--HHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcC
Q 027517 111 TMGYGLRNVVDK--RKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFL 188 (222)
Q Consensus 111 ~~~~~l~~~~~~--~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (222)
++..++|++++. ..++++++++|+|||++++.+...+..........+..... ..........+.+
T Consensus 253 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~ 320 (363)
T 3dp7_A 253 WMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISL------------YFTAMANGNSKMF 320 (363)
T ss_dssp EEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHH------------HHHHSSCSSCCSC
T ss_pred EEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhh------------hHHhhhCCCCccc
Confidence 999999999764 57899999999999999999987655433221111100000 0000111112467
Q ss_pred CHHHHHHHHHHcCCeEEEEeeecCCeeeeEeee
Q 027517 189 TGKDLEKLALEIGFSRAKHYELSGGLMGNLVAT 221 (222)
Q Consensus 189 ~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~ 221 (222)
+.++|.++++++||+++++....+....++.++
T Consensus 321 t~~e~~~ll~~AGf~~v~~~~~~g~~~svi~~~ 353 (363)
T 3dp7_A 321 HSDDLIRCIENAGLEVEEIQDNIGLGHSILQCR 353 (363)
T ss_dssp CHHHHHHHHHTTTEEESCCCCCBTTTBEEEEEE
T ss_pred CHHHHHHHHHHcCCeEEEEEeCCCCCceEEEEe
Confidence 999999999999999999887776656666654
No 42
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.89 E-value=4.5e-22 Score=150.72 Aligned_cols=163 Identities=18% Similarity=0.181 Sum_probs=122.8
Q ss_pred HHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCC
Q 027517 25 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 104 (222)
Q Consensus 25 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 104 (222)
.+++.+...++.+|||+|||+|.++..+++ ++.+++++|+|+.+++.++++. +++.+.++|+.++++ +
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~-~ 115 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY--------PHLHFDVADARNFRV-D 115 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC--------TTSCEEECCTTTCCC-S
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC--------CCCEEEECChhhCCc-C
Confidence 445566667888999999999999999987 3569999999999999998775 478999999998876 4
Q ss_pred CceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCc-hhhHHHHHHhhcccccccccCChhHHHHHhHHh
Q 027517 105 CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQP-FTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSS 183 (222)
Q Consensus 105 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (222)
++||+|++..++++++++..++++++++|||||++++..+...... ....+.......... . .. ...
T Consensus 116 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~----~~-~~~ 183 (279)
T 3ccf_A 116 KPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIH-------N----PQ-ALN 183 (279)
T ss_dssp SCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCC-------C----GG-GGC
T ss_pred CCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCc-------c----cc-CcC
Confidence 7899999999999999999999999999999999999877654321 111111111100000 0 00 001
Q ss_pred HhhcCCHHHHHHHHHHcCCeEEEEeeec
Q 027517 184 IREFLTGKDLEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 184 ~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 211 (222)
...+++.+++.++++++||++++.....
T Consensus 184 ~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 211 (279)
T 3ccf_A 184 PWYFPSIGEYVNILEKQGFDVTYAALFN 211 (279)
T ss_dssp CCCCCCHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ceeCCCHHHHHHHHHHcCCEEEEEEEec
Confidence 1235689999999999999998866544
No 43
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.89 E-value=9.7e-23 Score=152.25 Aligned_cols=155 Identities=14% Similarity=0.070 Sum_probs=122.1
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCC
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 103 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 103 (222)
..++..+...++.+|||+|||+|.++..+++.. ..+++++|+++.+++.++++.... .++.+.+.|+.+++++
T Consensus 83 ~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~~~ 155 (254)
T 1xtp_A 83 RNFIASLPGHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM-----PVGKFILASMETATLP 155 (254)
T ss_dssp HHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS-----SEEEEEESCGGGCCCC
T ss_pred HHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC-----CceEEEEccHHHCCCC
Confidence 445555566678899999999999999998874 447999999999999999886432 4789999999988877
Q ss_pred CCceeEEEEcccccCcc--cHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhH
Q 027517 104 DCFFDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLK 181 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (222)
+++||+|++..+++|++ +...++++++++|||||.+++.+.......... ..
T Consensus 156 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~------------~~-------------- 209 (254)
T 1xtp_A 156 PNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLV------------DK-------------- 209 (254)
T ss_dssp SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEE------------ET--------------
T ss_pred CCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCccccee------------cc--------------
Confidence 78899999999999994 578999999999999999999876432211100 00
Q ss_pred HhHhhcCCHHHHHHHHHHcCCeEEEEeeec
Q 027517 182 SSIREFLTGKDLEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 182 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 211 (222)
......++.+++.++++++||++++.....
T Consensus 210 ~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 210 EDSSLTRSDIHYKRLFNESGVRVVKEAFQE 239 (254)
T ss_dssp TTTEEEBCHHHHHHHHHHHTCCEEEEEECT
T ss_pred cCCcccCCHHHHHHHHHHCCCEEEEeeecC
Confidence 001134689999999999999999887654
No 44
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.89 E-value=5.4e-22 Score=149.92 Aligned_cols=177 Identities=20% Similarity=0.253 Sum_probs=127.5
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChh------HHHHHhcchhhhhhhcCCCeeEEeCC-
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKN------QLSMASSRQDLVSKACYKNIEWVEGD- 96 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~d- 96 (222)
..+++.+...++.+|||+|||+|.++..+++..++..+++++|+|+. +++.++++....+.. +++.+.+.|
T Consensus 33 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~ 110 (275)
T 3bkx_A 33 LAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLG--DRLTVHFNTN 110 (275)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTG--GGEEEECSCC
T ss_pred HHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCC--CceEEEECCh
Confidence 45566667788899999999999999999998656579999999997 999999887543321 479999998
Q ss_pred --CCCcCCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhh--HHHHHHhhcccccccccCC
Q 027517 97 --ALDLPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTT--AIQEWMIDNVVVPVASGYG 172 (222)
Q Consensus 97 --~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 172 (222)
...+++++++||+|++..+++|++++..+++.++++++|||.+++.++..+...... ...............
T Consensus 111 ~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 186 (275)
T 3bkx_A 111 LSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIA---- 186 (275)
T ss_dssp TTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHS----
T ss_pred hhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhcc----
Confidence 344556668899999999999999988888888888888999999988765432211 110000000000000
Q ss_pred hhHHHHHhHHhHhhcCCHHHHHHHHHHcCCeEEEEeeec
Q 027517 173 LAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 211 (222)
..........++.+++.++++++||++++...+.
T Consensus 187 -----~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~~ 220 (275)
T 3bkx_A 187 -----PSDVANIRTLITPDTLAQIAHDNTWTYTAGTIVE 220 (275)
T ss_dssp -----CCTTCSCCCCCCHHHHHHHHHHHTCEEEECCCBC
T ss_pred -----ccccccccccCCHHHHHHHHHHCCCeeEEEEEec
Confidence 0000112246899999999999999999877653
No 45
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.89 E-value=1.7e-22 Score=146.96 Aligned_cols=141 Identities=18% Similarity=0.118 Sum_probs=114.6
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEE
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 111 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~ 111 (222)
.+++.+|||+|||+|.++..+++. +.+++++|+++.+++.++++. ++.+..+|+.+++ +.++||+|+
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~d~~~~~-~~~~fD~v~ 107 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL---------GRPVRTMLFHQLD-AIDAYDAVW 107 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH---------TSCCEECCGGGCC-CCSCEEEEE
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc---------CCceEEeeeccCC-CCCcEEEEE
Confidence 356789999999999999999876 459999999999999999875 5678889988877 668899999
Q ss_pred EcccccCcc--cHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcCC
Q 027517 112 MGYGLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLT 189 (222)
Q Consensus 112 ~~~~l~~~~--~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (222)
+..+++|++ +...++++++++|||||.+++........... .. ......++
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~-~~--------------------------~~~~~~~~ 160 (211)
T 3e23_A 108 AHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRD-KL--------------------------ARYYNYPS 160 (211)
T ss_dssp ECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEEC-TT--------------------------SCEECCCC
T ss_pred ecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCccccc-cc--------------------------chhccCCC
Confidence 999999997 78899999999999999999986554322110 00 01124679
Q ss_pred HHHHHHHHHHcC-CeEEEEeeecC
Q 027517 190 GKDLEKLALEIG-FSRAKHYELSG 212 (222)
Q Consensus 190 ~~~~~~~l~~~G-f~~~~~~~~~~ 212 (222)
.+++.++++++| |++++......
T Consensus 161 ~~~~~~~l~~aG~f~~~~~~~~~~ 184 (211)
T 3e23_A 161 EEWLRARYAEAGTWASVAVESSEG 184 (211)
T ss_dssp HHHHHHHHHHHCCCSEEEEEEEEE
T ss_pred HHHHHHHHHhCCCcEEEEEEeccC
Confidence 999999999999 99998776543
No 46
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.89 E-value=3.3e-22 Score=150.09 Aligned_cols=155 Identities=19% Similarity=0.248 Sum_probs=116.1
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEE
Q 027517 31 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAI 110 (222)
Q Consensus 31 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v 110 (222)
...++.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++... ..+++.+.++|+.++++++++||+|
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~~d~~~~~~~~~~fD~v 108 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKIAG----VDRKVQVVQADARAIPLPDESVHGV 108 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHTTT----SCTTEEEEESCTTSCCSCTTCEEEE
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHhhc----cCCceEEEEcccccCCCCCCCeeEE
Confidence 4567889999999999999999865 46899999999999999988621 1258999999999888777889999
Q ss_pred EEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCC-Cc---hhhHHHHHHhhcccccccccCChhHHHHHhHHhHhh
Q 027517 111 TMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKST-QP---FTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIRE 186 (222)
Q Consensus 111 ~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (222)
++..++++++++..++++++++|+|||.+++. +.... .. +...+......... +. .....
T Consensus 109 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------------~~~~~ 172 (263)
T 2yqz_A 109 IVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG-WDQAEASPEWTLQERWRAFAAEEGF-PV--------------ERGLH 172 (263)
T ss_dssp EEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE-EEEECCCHHHHHHHHHHHHHHHHTC-CC--------------CCCHH
T ss_pred EECCchhhcCCHHHHHHHHHHHCCCCcEEEEE-ecCCCccHHHHHHHHHHHHHHHhCC-Cc--------------ccccc
Confidence 99999999999999999999999999999887 33221 11 11111111110000 00 00123
Q ss_pred cCCHHHHHHHHHHcCCeEEEEe
Q 027517 187 FLTGKDLEKLALEIGFSRAKHY 208 (222)
Q Consensus 187 ~~~~~~~~~~l~~~Gf~~~~~~ 208 (222)
.++.+++.++++++||+++...
T Consensus 173 ~~~~~~~~~~l~~~Gf~~~~~~ 194 (263)
T 2yqz_A 173 AKRLKEVEEALRRLGLKPRTRE 194 (263)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEE
T ss_pred cCCHHHHHHHHHHcCCCcceEE
Confidence 5678899999999999977653
No 47
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.89 E-value=1e-22 Score=150.37 Aligned_cols=173 Identities=23% Similarity=0.321 Sum_probs=121.8
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhh--cCCCeeEEeCCCCCcCCCCCceeEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA--CYKNIEWVEGDALDLPFSDCFFDAI 110 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~d~~~~~~~~~~~D~v 110 (222)
+++.+|||+|||+|..+..+++. +.+++++|+++.+++.++++....+.. ...++.+.+.|+.+++++.++||+|
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 105 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFA 105 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEE
Confidence 46789999999999999999876 459999999999999999876543210 0125799999999988877899999
Q ss_pred EEcccccCcccHH---HHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcc-cccccccCChhHHHHHhHHhHhh
Q 027517 111 TMGYGLRNVVDKR---KALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNV-VVPVASGYGLAEEYQYLKSSIRE 186 (222)
Q Consensus 111 ~~~~~l~~~~~~~---~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 186 (222)
++..++++++++. .++++++++|+|||.+++.++........ ....+.... .......+..............+
T Consensus 106 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (235)
T 3sm3_A 106 VMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKL--YRKRYLHDFPITKEEGSFLARDPETGETEFIAH 183 (235)
T ss_dssp EEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHH--HHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEE
T ss_pred EEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHH--HHHHhhhhccchhhhcceEecccccCCcceeeE
Confidence 9999999998877 89999999999999999998876433211 111111000 00000000000000000011235
Q ss_pred cCCHHHHHHHHHHcCCeEEEEeee
Q 027517 187 FLTGKDLEKLALEIGFSRAKHYEL 210 (222)
Q Consensus 187 ~~~~~~~~~~l~~~Gf~~~~~~~~ 210 (222)
.++.+++.++++++||+++++...
T Consensus 184 ~~~~~~l~~ll~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 184 HFTEKELVFLLTDCRFEIDYFRVK 207 (235)
T ss_dssp CBCHHHHHHHHHTTTEEEEEEEEE
T ss_pred eCCHHHHHHHHHHcCCEEEEEEec
Confidence 689999999999999999887654
No 48
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.89 E-value=8.7e-22 Score=153.56 Aligned_cols=170 Identities=19% Similarity=0.148 Sum_probs=122.8
Q ss_pred HHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCC
Q 027517 25 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 104 (222)
Q Consensus 25 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 104 (222)
.+++.+...++.+|||+|||+|..+..+++.+ ++.+++++|+ +.++. +++....+. .+++++..+|+.+ +.+
T Consensus 175 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~--~~~~~~~~~--~~~v~~~~~d~~~-~~p- 246 (348)
T 3lst_A 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREH-PGLQGVLLDR-AEVVA--RHRLDAPDV--AGRWKVVEGDFLR-EVP- 246 (348)
T ss_dssp HHHHHSCCCSSEEEEEETCTTSHHHHHHHHHC-TTEEEEEEEC-HHHHT--TCCCCCGGG--TTSEEEEECCTTT-CCC-
T ss_pred HHHHhCCccCCceEEEECCccCHHHHHHHHHC-CCCEEEEecC-HHHhh--cccccccCC--CCCeEEEecCCCC-CCC-
Confidence 34455566778899999999999999999985 6778999999 45554 333322221 2589999999973 344
Q ss_pred CceeEEEEcccccCcccH--HHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHH
Q 027517 105 CFFDAITMGYGLRNVVDK--RKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKS 182 (222)
Q Consensus 105 ~~~D~v~~~~~l~~~~~~--~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (222)
+||+|++..++|++++. ..++++++++|||||++++.+...+...... ...+.. ......
T Consensus 247 -~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~-~~~~~d----------------~~~~~~ 308 (348)
T 3lst_A 247 -HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAH-QSKEMD----------------FMMLAA 308 (348)
T ss_dssp -CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCC-HHHHHH----------------HHHHHT
T ss_pred -CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcc-hhhhcC----------------hhhhhc
Confidence 79999999999999876 6999999999999999999987655432111 001110 011111
Q ss_pred hHhhcCCHHHHHHHHHHcCCeEEEEeeecCCeeeeEeee
Q 027517 183 SIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVAT 221 (222)
Q Consensus 183 ~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~ 221 (222)
.....++.++|.++++++||+++++.. ..+...++.++
T Consensus 309 ~~~~~~t~~e~~~ll~~aGf~~~~~~~-~~~~~~vie~~ 346 (348)
T 3lst_A 309 RTGQERTAAELEPLFTAAGLRLDRVVG-TSSVMSIAVGV 346 (348)
T ss_dssp TSCCCCBHHHHHHHHHHTTEEEEEEEE-CSSSCEEEEEE
T ss_pred CCCcCCCHHHHHHHHHHCCCceEEEEE-CCCCcEEEEEE
Confidence 122457899999999999999999987 55566666665
No 49
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.89 E-value=1.7e-22 Score=148.30 Aligned_cols=164 Identities=16% Similarity=0.137 Sum_probs=118.8
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc---
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL--- 100 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~--- 100 (222)
..++..+...++.+|||+|||+|.++..+++. +.+++++|+++.+++.++++ .++.+...|+.++
T Consensus 42 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~---------~~~~~~~~~~~~~~~~ 109 (227)
T 3e8s_A 42 QAILLAILGRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA---------GAGEVHLASYAQLAEA 109 (227)
T ss_dssp HHHHHHHHHTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT---------CSSCEEECCHHHHHTT
T ss_pred HHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh---------cccccchhhHHhhccc
Confidence 34555555566789999999999999999866 56899999999999999987 3677888888765
Q ss_pred CCC-CCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHH
Q 027517 101 PFS-DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQY 179 (222)
Q Consensus 101 ~~~-~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (222)
+.. ..+||+|++..+++ .+++..++++++++|+|||.+++.+++............|..... .......
T Consensus 110 ~~~~~~~fD~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------- 179 (227)
T 3e8s_A 110 KVPVGKDYDLICANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESF-AGFAGDW-------- 179 (227)
T ss_dssp CSCCCCCEEEEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECC-TTSSSCC--------
T ss_pred ccccCCCccEEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhh-hccccCc--------
Confidence 433 34599999999999 888899999999999999999999877644322111111100000 0000000
Q ss_pred hHHhHhhcCCHHHHHHHHHHcCCeEEEEeee
Q 027517 180 LKSSIREFLTGKDLEKLALEIGFSRAKHYEL 210 (222)
Q Consensus 180 ~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 210 (222)
......+++.+++.++|+++||+++++...
T Consensus 180 -~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 209 (227)
T 3e8s_A 180 -QPMPWYFRTLASWLNALDMAGLRLVSLQEP 209 (227)
T ss_dssp -CCEEEEECCHHHHHHHHHHTTEEEEEEECC
T ss_pred -ccceEEEecHHHHHHHHHHcCCeEEEEecC
Confidence 012234679999999999999999988763
No 50
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.89 E-value=3e-22 Score=148.03 Aligned_cols=142 Identities=19% Similarity=0.200 Sum_probs=115.1
Q ss_pred CCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEEcc
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGY 114 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~ 114 (222)
+.+|||+|||+|..+..+++ ++.+++++|+|+.+++.++++....+.. .++.+.++|+.+++. .++||+|++..
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~-~~~fD~v~~~~ 140 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS---PERFVVGLDISESALAKANETYGSSPKA--EYFSFVKEDVFTWRP-TELFDLIFDYV 140 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSGGG--GGEEEECCCTTTCCC-SSCEEEEEEES
T ss_pred CCCEEEeCCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccCCC--cceEEEECchhcCCC-CCCeeEEEECh
Confidence 35999999999999998875 4668999999999999999987543221 479999999998763 45899999999
Q ss_pred cccCcc--cHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcCCHHH
Q 027517 115 GLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKD 192 (222)
Q Consensus 115 ~l~~~~--~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (222)
++++++ +...++++++++|+|||.+++.++........ ....++.++
T Consensus 141 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~-------------------------------~~~~~~~~~ 189 (235)
T 3lcc_A 141 FFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGG-------------------------------PPYKVDVST 189 (235)
T ss_dssp STTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSC-------------------------------SSCCCCHHH
T ss_pred hhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCC-------------------------------CCccCCHHH
Confidence 999997 78999999999999999999887654321100 001358899
Q ss_pred HHHHHHHcCCeEEEEeeecCC
Q 027517 193 LEKLALEIGFSRAKHYELSGG 213 (222)
Q Consensus 193 ~~~~l~~~Gf~~~~~~~~~~~ 213 (222)
+.++++++||+++++......
T Consensus 190 ~~~~l~~~Gf~~~~~~~~~~~ 210 (235)
T 3lcc_A 190 FEEVLVPIGFKAVSVEENPHA 210 (235)
T ss_dssp HHHHHGGGTEEEEEEEECTTC
T ss_pred HHHHHHHcCCeEEEEEecCCc
Confidence 999999999999998776543
No 51
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.89 E-value=2.4e-21 Score=151.95 Aligned_cols=164 Identities=18% Similarity=0.211 Sum_probs=121.3
Q ss_pred HHHhhC-CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCC
Q 027517 26 AVSWSG-AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 104 (222)
Q Consensus 26 ~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 104 (222)
++..+. ..+..+|||+|||+|..+..+++.+ ++.+++++|+ +.+++.+++. +++++..+|+.+ +.+.
T Consensus 194 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~---------~~v~~~~~d~~~-~~p~ 261 (368)
T 3reo_A 194 ILEMYNGFEGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPAF---------SGVEHLGGDMFD-GVPK 261 (368)
T ss_dssp HHTTCCTTTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC---------TTEEEEECCTTT-CCCC
T ss_pred HHHhcccccCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhhc---------CCCEEEecCCCC-CCCC
Confidence 333333 5567899999999999999999986 6779999999 8888877654 589999999987 5554
Q ss_pred CceeEEEEcccccCcccH--HHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHH
Q 027517 105 CFFDAITMGYGLRNVVDK--RKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKS 182 (222)
Q Consensus 105 ~~~D~v~~~~~l~~~~~~--~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (222)
. |+|++..++|++++. .+++++++++|+|||++++.+...+............. ..+......
T Consensus 262 ~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~-------------~~d~~~~~~ 326 (368)
T 3reo_A 262 G--DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVI-------------HTDALMLAY 326 (368)
T ss_dssp C--SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHH-------------HHHHHHHHH
T ss_pred C--CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHH-------------hhhHHHHhh
Confidence 3 999999999999764 57899999999999999999987654432111100000 000011110
Q ss_pred -hHhhcCCHHHHHHHHHHcCCeEEEEeeecCCeee
Q 027517 183 -SIREFLTGKDLEKLALEIGFSRAKHYELSGGLMG 216 (222)
Q Consensus 183 -~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~ 216 (222)
.....++.++|.++++++||+++++....+..+.
T Consensus 327 ~~~g~~rt~~e~~~ll~~AGF~~v~~~~~~~~~~v 361 (368)
T 3reo_A 327 NPGGKERTEKEFQALAMASGFRGFKVASCAFNTYV 361 (368)
T ss_dssp SSBCCCCCHHHHHHHHHHTTCCEEEEEEEETTEEE
T ss_pred cCCCccCCHHHHHHHHHHCCCeeeEEEEeCCCcEE
Confidence 1224578999999999999999999988877653
No 52
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.89 E-value=2.3e-21 Score=152.67 Aligned_cols=175 Identities=19% Similarity=0.169 Sum_probs=126.1
Q ss_pred HHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCC
Q 027517 25 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 104 (222)
Q Consensus 25 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 104 (222)
.+++.+...++.+|||+|||+|..+..+++.. ++.+++++|+ +.+++.++++....+.. .++++..+|+.+ +.+.
T Consensus 173 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~-~~~~ 247 (374)
T 1qzz_A 173 APADAYDWSAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGLA--DRVTVAEGDFFK-PLPV 247 (374)
T ss_dssp HHHHTSCCTTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCT--TTEEEEECCTTS-CCSC
T ss_pred HHHHhCCCCCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCCC--CceEEEeCCCCC-cCCC
Confidence 44455556678899999999999999999985 6679999999 99999999887544321 479999999876 3443
Q ss_pred CceeEEEEcccccCcccH--HHHHHHHhcccCCCcEEEEEec--CCCCCchhhHHHHHHhhcccccccccCChhHHHHHh
Q 027517 105 CFFDAITMGYGLRNVVDK--RKALEESFRVLKPGSRISVLDF--NKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYL 180 (222)
Q Consensus 105 ~~~D~v~~~~~l~~~~~~--~~~l~~~~~~l~~gG~l~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (222)
.||+|++.+++|++++. ..++++++++|+|||++++.+. ..+.... .....+.. ....
T Consensus 248 -~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~-~~~~~~~~----------------~~~~ 309 (374)
T 1qzz_A 248 -TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGAD-RFFSTLLD----------------LRML 309 (374)
T ss_dssp -CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH--------HHHHHHHH----------------HHHH
T ss_pred -CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCC-cchhhhcc----------------hHHH
Confidence 49999999999999876 4899999999999999999887 4332211 11111110 0000
Q ss_pred HHhHhhcCCHHHHHHHHHHcCCeEEEEeeecCCee----eeEeeeC
Q 027517 181 KSSIREFLTGKDLEKLALEIGFSRAKHYELSGGLM----GNLVATR 222 (222)
Q Consensus 181 ~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~----~~~~~~k 222 (222)
.......++.++|.++++++||+++++.......+ .++.++|
T Consensus 310 ~~~~~~~~~~~~~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (374)
T 1qzz_A 310 TFMGGRVRTRDEVVDLAGSAGLALASERTSGSTTLPFDFSILEFTA 355 (374)
T ss_dssp HHHSCCCCCHHHHHHHHHTTTEEEEEEEEECCSSCSSCEEEEEEEE
T ss_pred HhCCCcCCCHHHHHHHHHHCCCceEEEEECCCCcccCCcEEEEEEE
Confidence 11113467999999999999999999887754431 5666553
No 53
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.88 E-value=1.3e-21 Score=153.80 Aligned_cols=167 Identities=20% Similarity=0.194 Sum_probs=124.5
Q ss_pred HHHhhC-CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCC
Q 027517 26 AVSWSG-AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 104 (222)
Q Consensus 26 ~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 104 (222)
++..+. ..+..+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++. +++++..+|+.+ +.+.
T Consensus 200 l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~---------~~v~~~~~d~~~-~~~~ 267 (372)
T 1fp1_D 200 MLEIYTGFEGISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPPL---------SGIEHVGGDMFA-SVPQ 267 (372)
T ss_dssp HHHHCCTTTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC---------TTEEEEECCTTT-CCCC
T ss_pred HHHHhhccCCCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhhc---------CCCEEEeCCccc-CCCC
Confidence 344443 5567899999999999999999985 6678999999 9998877753 479999999987 5553
Q ss_pred CceeEEEEcccccCcccHH--HHHHHHhcccCCCcEEEEEecCCCCCchhhH---HHHHHhhcccccccccCChhHHHHH
Q 027517 105 CFFDAITMGYGLRNVVDKR--KALEESFRVLKPGSRISVLDFNKSTQPFTTA---IQEWMIDNVVVPVASGYGLAEEYQY 179 (222)
Q Consensus 105 ~~~D~v~~~~~l~~~~~~~--~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (222)
||+|++..++|++++.. .++++++++|+|||++++.+...+....... ...... ...
T Consensus 268 --~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d----------------~~~ 329 (372)
T 1fp1_D 268 --GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLD----------------NLM 329 (372)
T ss_dssp --EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHH----------------HHH
T ss_pred --CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhh----------------HHH
Confidence 99999999999998876 9999999999999999999876544322110 011100 001
Q ss_pred hHHhHhhcCCHHHHHHHHHHcCCeEEEEeeecCCeeeeEeeeC
Q 027517 180 LKSSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 222 (222)
Q Consensus 180 ~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~k 222 (222)
......+.++.++|.++++++||+++++.....+.+.++.++|
T Consensus 330 ~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~vie~~~ 372 (372)
T 1fp1_D 330 FITVGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372 (372)
T ss_dssp HHHHSCCCEEHHHHHHHHHHTTCSEEEEEEEETTTEEEEEEEC
T ss_pred HhccCCccCCHHHHHHHHHHCCCceEEEEEcCCCCeEEEEEeC
Confidence 1011124569999999999999999999886555237777765
No 54
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.88 E-value=3.4e-21 Score=150.85 Aligned_cols=169 Identities=15% Similarity=0.173 Sum_probs=123.8
Q ss_pred HHHhhC-CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCC
Q 027517 26 AVSWSG-AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 104 (222)
Q Consensus 26 ~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 104 (222)
++..+. ..+..+|||+|||+|..+..+++.+ ++.+++++|+ +.+++.+++. +++++..+|+.+ +.+.
T Consensus 192 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~---------~~v~~~~~D~~~-~~p~ 259 (364)
T 3p9c_A 192 LLELYHGFEGLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEAPQF---------PGVTHVGGDMFK-EVPS 259 (364)
T ss_dssp HHHHCCTTTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC---------TTEEEEECCTTT-CCCC
T ss_pred HHHhcccccCCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhhhhc---------CCeEEEeCCcCC-CCCC
Confidence 444444 5677899999999999999999986 6779999999 8888777654 589999999987 6664
Q ss_pred CceeEEEEcccccCccc--HHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhH-
Q 027517 105 CFFDAITMGYGLRNVVD--KRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLK- 181 (222)
Q Consensus 105 ~~~D~v~~~~~l~~~~~--~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 181 (222)
. |+|++..++|++++ ...++++++++|+|||++++.+...+............. ..+.....
T Consensus 260 ~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~-------------~~d~~m~~~ 324 (364)
T 3p9c_A 260 G--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVF-------------HVDMIMLAH 324 (364)
T ss_dssp C--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHH-------------HHHHHHHHH
T ss_pred C--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHH-------------HhHHHHHhc
Confidence 3 99999999999965 468899999999999999999987654322111100000 00011110
Q ss_pred HhHhhcCCHHHHHHHHHHcCCeEEEEeeecCCeeeeEeeeC
Q 027517 182 SSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 222 (222)
Q Consensus 182 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~k 222 (222)
......++.++|.++++++||+++++....+..+ ++.+.|
T Consensus 325 ~~~g~~rt~~e~~~ll~~AGF~~v~~~~~~~~~~-vie~~k 364 (364)
T 3p9c_A 325 NPGGRERYEREFQALARGAGFTGVKSTYIYANAW-AIEFTK 364 (364)
T ss_dssp CSSCCCCBHHHHHHHHHHTTCCEEEEEEEETTEE-EEEEEC
T ss_pred ccCCccCCHHHHHHHHHHCCCceEEEEEcCCceE-EEEEeC
Confidence 0122457899999999999999999998876654 555543
No 55
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.88 E-value=9.3e-22 Score=151.67 Aligned_cols=171 Identities=16% Similarity=0.163 Sum_probs=124.8
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCC
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 103 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 103 (222)
..+++.+...++.+|||+|||+|..+..+++.+ +.+++++|+|+.+++.++++....+.. +++.+.+.|+.+++
T Consensus 80 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~-- 153 (318)
T 2fk8_A 80 DLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTN--RSRQVLLQGWEDFA-- 153 (318)
T ss_dssp HHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCS--SCEEEEESCGGGCC--
T ss_pred HHHHHhcCCCCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCC--CceEEEECChHHCC--
Confidence 345555667788899999999999999999886 459999999999999999887544322 46999999998764
Q ss_pred CCceeEEEEcccccCc--ccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhH
Q 027517 104 DCFFDAITMGYGLRNV--VDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLK 181 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~--~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (222)
++||+|++..+++|+ +++..+++++.++|||||.+++.++................ ........++.
T Consensus 154 -~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~ 222 (318)
T 2fk8_A 154 -EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLS----------FETARFIKFIV 222 (318)
T ss_dssp -CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHH----------HHHHHHHHHHH
T ss_pred -CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhcccccc----------ccccchhhHHH
Confidence 679999999999999 67899999999999999999999888655321100000000 00000000000
Q ss_pred H---hHhhcCCHHHHHHHHHHcCCeEEEEeeec
Q 027517 182 S---SIREFLTGKDLEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 182 ~---~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 211 (222)
. ......+.+++.++++++||++++.....
T Consensus 223 ~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 255 (318)
T 2fk8_A 223 TEIFPGGRLPSTEMMVEHGEKAGFTVPEPLSLR 255 (318)
T ss_dssp HHTSTTCCCCCHHHHHHHHHHTTCBCCCCEECH
T ss_pred HhcCCCCcCCCHHHHHHHHHhCCCEEEEEEecc
Confidence 0 01235689999999999999998876543
No 56
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.88 E-value=1.6e-22 Score=146.20 Aligned_cols=151 Identities=14% Similarity=0.063 Sum_probs=112.0
Q ss_pred HHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhh---------hhcCCCeeEEeCCC
Q 027517 27 VSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVS---------KACYKNIEWVEGDA 97 (222)
Q Consensus 27 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~---------~~~~~~i~~~~~d~ 97 (222)
+..+...++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.++++..... .....++++.++|+
T Consensus 15 ~~~l~~~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~ 91 (203)
T 1pjz_A 15 WSSLNVVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF 91 (203)
T ss_dssp HHHHCCCTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred HHhcccCCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcc
Confidence 34455567889999999999999999986 4699999999999999988753200 00125899999999
Q ss_pred CCcCCCC-CceeEEEEcccccCccc--HHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChh
Q 027517 98 LDLPFSD-CFFDAITMGYGLRNVVD--KRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLA 174 (222)
Q Consensus 98 ~~~~~~~-~~~D~v~~~~~l~~~~~--~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (222)
.++++++ ++||+|++..++++++. ...++++++++|||||++++......... ..+.
T Consensus 92 ~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~----------------~~~~---- 151 (203)
T 1pjz_A 92 FALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQAL----------------LEGP---- 151 (203)
T ss_dssp SSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSS----------------SSSC----
T ss_pred ccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccc----------------cCCC----
Confidence 9987654 68999999999998864 46789999999999998555543322110 0000
Q ss_pred HHHHHhHHhHhhcCCHHHHHHHHHHcCCeEEEEeeec
Q 027517 175 EEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 211 (222)
...++.+++.+++++ ||+++......
T Consensus 152 ----------~~~~~~~el~~~~~~-gf~i~~~~~~~ 177 (203)
T 1pjz_A 152 ----------PFSVPQTWLHRVMSG-NWEVTKVGGQD 177 (203)
T ss_dssp ----------CCCCCHHHHHHTSCS-SEEEEEEEESS
T ss_pred ----------CCCCCHHHHHHHhcC-CcEEEEecccc
Confidence 012578999999998 99987766543
No 57
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.88 E-value=3.6e-22 Score=148.19 Aligned_cols=127 Identities=20% Similarity=0.343 Sum_probs=99.6
Q ss_pred hHHHHhhhhcCcchhhHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhh
Q 027517 5 SLKLQLNDLLSFGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK 84 (222)
Q Consensus 5 ~~yd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (222)
..||... .......+.+.+...+ +++.+|||+|||+|..+..+++. .+++++|+++.+++.++++....+
T Consensus 9 ~~yd~~~---~~~~~~~~~~~~~~~~--~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~- 78 (243)
T 3d2l_A 9 YVYDELM---QDVPYPEWVAWVLEQV--EPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN- 78 (243)
T ss_dssp HHHHHHT---TTCCHHHHHHHHHHHS--CTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT-
T ss_pred HHHHHhh---hcccHHHHHHHHHHHc--CCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC-
Confidence 3455533 2333455656666654 45689999999999999988754 589999999999999998875433
Q ss_pred hcCCCeeEEeCCCCCcCCCCCceeEEEEcc-cccCc---ccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 85 ACYKNIEWVEGDALDLPFSDCFFDAITMGY-GLRNV---VDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 85 ~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~-~l~~~---~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
.++.+.+.|+.+.+.+ ++||+|++.. +++|+ ++...+++++.++|+|||.+++....
T Consensus 79 ---~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 79 ---RHVDFWVQDMRELELP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp ---CCCEEEECCGGGCCCS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ---CceEEEEcChhhcCCC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 4789999999887765 7899999986 88888 45678999999999999999875543
No 58
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.88 E-value=7.5e-22 Score=146.11 Aligned_cols=177 Identities=16% Similarity=0.180 Sum_probs=119.7
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
.++.+|||+|||+|..+..+++.. .+++++|+|+.+++.++++. +++.+.++|+.+++. +++||+|+|
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~-~~~~D~v~~ 106 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL--------PDATLHQGDMRDFRL-GRKFSAVVS 106 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC--------TTCEEEECCTTTCCC-SSCEEEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC--------CCCEEEECCHHHccc-CCCCcEEEE
Confidence 567899999999999999999884 28999999999999998875 478999999998776 578999996
Q ss_pred -cccccCcc---cHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhh---cccc--------------cccccC
Q 027517 113 -GYGLRNVV---DKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMID---NVVV--------------PVASGY 171 (222)
Q Consensus 113 -~~~l~~~~---~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~---~~~~--------------~~~~~~ 171 (222)
..+++|++ +...++++++++|+|||.+++.++..+..........+... .... ......
T Consensus 107 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (239)
T 3bxo_A 107 MFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATRMEVHFTV 186 (239)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred cCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEEEEEEEEE
Confidence 44888884 56789999999999999999987655432111000000000 0000 000000
Q ss_pred Ch-hHHHH-HhHHhHhhcCCHHHHHHHHHHcCCeEEEEeeecCCeeeeEeeeC
Q 027517 172 GL-AEEYQ-YLKSSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 222 (222)
Q Consensus 172 ~~-~~~~~-~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~k 222 (222)
.. ..... .......+.++++++.++|+++||+++..... .+...+++|+|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~-~~~~~~~va~K 238 (239)
T 3bxo_A 187 ADPGKGVRHFSDVHLITLFHQAEYEAAFTAAGLRVEYLEGG-PSGRGLFVGVP 238 (239)
T ss_dssp EETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESST-TTSSCEEEEEE
T ss_pred ecCCCcceEEEEEEEeeecCHHHHHHHHHHCCCEEEEeEcC-CCCceEEEEec
Confidence 00 00000 00011235789999999999999987776543 34456777775
No 59
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.88 E-value=3.9e-22 Score=151.98 Aligned_cols=155 Identities=15% Similarity=0.181 Sum_probs=107.3
Q ss_pred CCCCeEEEecCCCChhHHHHHHHh---CCCCcE--EEEeCChhHHHHHhcchhhhhhhcCCCee--EEeCCCCCcC----
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQV---GSQGKV--IGLDFSKNQLSMASSRQDLVSKACYKNIE--WVEGDALDLP---- 101 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~--~~~D~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~d~~~~~---- 101 (222)
.++.+|||||||+|..+..+++.+ .++..+ +++|+|++|++.++++..... ...++. +...++.+++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~ 128 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTS--NLENVKFAWHKETSSEYQSRML 128 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCS--SCTTEEEEEECSCHHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhcc--CCCcceEEEEecchhhhhhhhc
Confidence 456799999999998765443222 144544 999999999999998864321 113444 4455655443
Q ss_pred --CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHH
Q 027517 102 --FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQY 179 (222)
Q Consensus 102 --~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (222)
+++++||+|++..++||++++..++++++++|||||++++...... ..+...+..+.. .. ..
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~-~~~~~~~~~~~~-~~----~~---------- 192 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGS-SGWDKLWKKYGS-RF----PQ---------- 192 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTT-SHHHHHHHHHGG-GS----CC----------
T ss_pred cccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCC-ccHHHHHHHHHH-hc----cC----------
Confidence 4567899999999999999999999999999999999999876542 222111111110 00 00
Q ss_pred hHHhHhhcCCHHHHHHHHHHcCCeEEEE
Q 027517 180 LKSSIREFLTGKDLEKLALEIGFSRAKH 207 (222)
Q Consensus 180 ~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 207 (222)
..+..+++.+++.++|+++||+++..
T Consensus 193 --~~~~~~~~~~~~~~~l~~aGf~~~~~ 218 (292)
T 2aot_A 193 --DDLCQYITSDDLTQMLDNLGLKYECY 218 (292)
T ss_dssp --CTTCCCCCHHHHHHHHHHHTCCEEEE
T ss_pred --CCcccCCCHHHHHHHHHHCCCceEEE
Confidence 01234678999999999999998764
No 60
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.88 E-value=1.3e-22 Score=150.43 Aligned_cols=146 Identities=15% Similarity=0.102 Sum_probs=116.6
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEEc
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMG 113 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~ 113 (222)
++.+|||+|||+|..+..+++.. ..+++++|+++.+++.++++....+. .++.+++.|+.+++++.++||+|++.
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~~ 153 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGK---RVRNYFCCGLQDFTPEPDSYDVIWIQ 153 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGG---GEEEEEECCGGGCCCCSSCEEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCC---ceEEEEEcChhhcCCCCCCEEEEEEc
Confidence 57899999999999999988763 45899999999999999988755421 46899999998887776789999999
Q ss_pred ccccCcccH--HHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcCCHH
Q 027517 114 YGLRNVVDK--RKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGK 191 (222)
Q Consensus 114 ~~l~~~~~~--~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (222)
.+++|+++. ..+++++.++|+|||.+++.+.......... .. ......+.+
T Consensus 154 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~------------~~---------------~~~~~~~~~ 206 (241)
T 2ex4_A 154 WVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILD------------DV---------------DSSVCRDLD 206 (241)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEE------------TT---------------TTEEEEBHH
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceec------------cc---------------CCcccCCHH
Confidence 999999874 4899999999999999999877654311000 00 001234889
Q ss_pred HHHHHHHHcCCeEEEEeeec
Q 027517 192 DLEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 192 ~~~~~l~~~Gf~~~~~~~~~ 211 (222)
++.++++++||++++.....
T Consensus 207 ~~~~~l~~aGf~~~~~~~~~ 226 (241)
T 2ex4_A 207 VVRRIICSAGLSLLAEERQE 226 (241)
T ss_dssp HHHHHHHHTTCCEEEEEECC
T ss_pred HHHHHHHHcCCeEEEeeecC
Confidence 99999999999999987654
No 61
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.88 E-value=3.1e-21 Score=141.05 Aligned_cols=143 Identities=24% Similarity=0.298 Sum_probs=111.2
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEEc
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMG 113 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~ 113 (222)
++.+|||+|||+|.++..+++ . +++|+++.+++.++++ ++.+.+.|+.+++++.++||+|++.
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~------~-~~vD~s~~~~~~a~~~----------~~~~~~~d~~~~~~~~~~fD~v~~~ 109 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKI------K-IGVEPSERMAEIARKR----------GVFVLKGTAENLPLKDESFDFALMV 109 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTC------C-EEEESCHHHHHHHHHT----------TCEEEECBTTBCCSCTTCEEEEEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHH------H-hccCCCHHHHHHHHhc----------CCEEEEcccccCCCCCCCeeEEEEc
Confidence 377999999999999987762 1 9999999999998876 5788999998888777789999999
Q ss_pred ccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcCCHHHH
Q 027517 114 YGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDL 193 (222)
Q Consensus 114 ~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (222)
.++++++++..+++++.++|+|||.+++.++..... . ..++... ..... .......++.+++
T Consensus 110 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~-~----~~~~~~~---~~~~~----------~~~~~~~~~~~~l 171 (219)
T 1vlm_A 110 TTICFVDDPERALKEAYRILKKGGYLIVGIVDRESF-L----GREYEKN---KEKSV----------FYKNARFFSTEEL 171 (219)
T ss_dssp SCGGGSSCHHHHHHHHHHHEEEEEEEEEEEECSSSH-H----HHHHHHT---TTC-C----------CSTTCCCCCHHHH
T ss_pred chHhhccCHHHHHHHHHHHcCCCcEEEEEEeCCccH-H----HHHHHHH---hcCcc----------hhcccccCCHHHH
Confidence 999999999999999999999999999988765321 1 1111100 00000 0012346799999
Q ss_pred HHHHHHcCCeEEEEeeec
Q 027517 194 EKLALEIGFSRAKHYELS 211 (222)
Q Consensus 194 ~~~l~~~Gf~~~~~~~~~ 211 (222)
.++++++||++++.....
T Consensus 172 ~~~l~~~Gf~~~~~~~~~ 189 (219)
T 1vlm_A 172 MDLMRKAGFEEFKVVQTL 189 (219)
T ss_dssp HHHHHHTTCEEEEEEEEC
T ss_pred HHHHHHCCCeEEEEeccc
Confidence 999999999999877654
No 62
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.88 E-value=2e-21 Score=142.06 Aligned_cols=163 Identities=20% Similarity=0.159 Sum_probs=115.6
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhh--cCCCeeEEeCCCCCcC
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA--CYKNIEWVEGDALDLP 101 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~d~~~~~ 101 (222)
+.+.+.+...++.+|||+|||+|.++..+++.. +..+++++|+|+.+++.++++....+.. ...++.+.++|+...+
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRD 97 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCC
T ss_pred HHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccc
Confidence 445555555677899999999999999999763 4469999999999999999887543210 0128999999998777
Q ss_pred CCCCceeEEEEcccccCcccH--HHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHH
Q 027517 102 FSDCFFDAITMGYGLRNVVDK--RKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQY 179 (222)
Q Consensus 102 ~~~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (222)
.+.++||+|++..+++|+++. ..+++++.++|||||.++..... ........... ...
T Consensus 98 ~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~-~~~~~~~~~~~-------------------~~~ 157 (219)
T 3jwg_A 98 KRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNK-EYNFHYGNLFE-------------------GNL 157 (219)
T ss_dssp GGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBG-GGGGCCCCT------------------------
T ss_pred cccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccch-hhhhhhcccCc-------------------ccc
Confidence 666789999999999999865 79999999999999966554321 11100000000 000
Q ss_pred hHHhHhhcCCHHHHH----HHHHHcCCeEEEE
Q 027517 180 LKSSIREFLTGKDLE----KLALEIGFSRAKH 207 (222)
Q Consensus 180 ~~~~~~~~~~~~~~~----~~l~~~Gf~~~~~ 207 (222)
....+...++.+++. ++++++||++...
T Consensus 158 ~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~~~ 189 (219)
T 3jwg_A 158 RHRDHRFEWTRKEFQTWAVKVAEKYGYSVRFL 189 (219)
T ss_dssp GGGCCTTSBCHHHHHHHHHHHHHHHTEEEEEE
T ss_pred cccCceeeecHHHHHHHHHHHHHHCCcEEEEE
Confidence 011223346888888 8999999977543
No 63
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.88 E-value=8.5e-22 Score=143.85 Aligned_cols=163 Identities=16% Similarity=0.143 Sum_probs=115.7
Q ss_pred HHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhh--cCCCeeEEeCCCCCc
Q 027517 23 KRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA--CYKNIEWVEGDALDL 100 (222)
Q Consensus 23 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~d~~~~ 100 (222)
...+.+.+...++.+|||+|||+|.++..+++.. +..+++++|+++.+++.++++....+.. ...++.+.++|+...
T Consensus 18 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (217)
T 3jwh_A 18 MNGVVAALKQSNARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ 96 (217)
T ss_dssp HHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc
Confidence 3456666666678899999999999999999863 4569999999999999999886432210 013799999999776
Q ss_pred CCCCCceeEEEEcccccCcccH--HHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHH
Q 027517 101 PFSDCFFDAITMGYGLRNVVDK--RKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQ 178 (222)
Q Consensus 101 ~~~~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (222)
+.+.++||+|++..+++|+++. ..+++++.++|||||.++++.... + ...+. .. ....
T Consensus 97 ~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~----~----~~~~~-~~-----------~~~~ 156 (217)
T 3jwh_A 97 DKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIE----Y----NVKFA-NL-----------PAGK 156 (217)
T ss_dssp CGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHH----H----HHHTC------------------
T ss_pred cccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcc----c----chhhc-cc-----------cccc
Confidence 6666789999999999999855 899999999999999776653210 0 00000 00 0000
Q ss_pred HhHHhHhhcCCHHHHH----HHHHHcCCeEEE
Q 027517 179 YLKSSIREFLTGKDLE----KLALEIGFSRAK 206 (222)
Q Consensus 179 ~~~~~~~~~~~~~~~~----~~l~~~Gf~~~~ 206 (222)
.....+...++++++. ++++++||++..
T Consensus 157 ~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~~ 188 (217)
T 3jwh_A 157 LRHKDHRFEWTRSQFQNWANKITERFAYNVQF 188 (217)
T ss_dssp -----CCSCBCHHHHHHHHHHHHHHSSEEEEE
T ss_pred ccccccccccCHHHHHHHHHHHHHHcCceEEE
Confidence 0011222346888888 999999998754
No 64
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.88 E-value=8.6e-21 Score=148.67 Aligned_cols=175 Identities=20% Similarity=0.213 Sum_probs=128.4
Q ss_pred HHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCC
Q 027517 25 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 104 (222)
Q Consensus 25 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 104 (222)
.+++.+...++.+|||+|||+|..+..+++.. ++.+++++|+ +.+++.++++....+.. .++++..+|+.+ +.+.
T Consensus 174 ~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~-~~~~ 248 (360)
T 1tw3_A 174 APAAAYDWTNVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEGLS--DRVDVVEGDFFE-PLPR 248 (360)
T ss_dssp HHHHHSCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTTCT--TTEEEEECCTTS-CCSS
T ss_pred HHHHhCCCccCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcCCC--CceEEEeCCCCC-CCCC
Confidence 34455556678899999999999999999885 6679999999 99999999887544321 489999999876 3343
Q ss_pred CceeEEEEcccccCcccH--HHHHHHHhcccCCCcEEEEEecC-CCCCchhhHHHHHHhhcccccccccCChhHHHHHhH
Q 027517 105 CFFDAITMGYGLRNVVDK--RKALEESFRVLKPGSRISVLDFN-KSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLK 181 (222)
Q Consensus 105 ~~~D~v~~~~~l~~~~~~--~~~l~~~~~~l~~gG~l~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (222)
.||+|++..++|++++. ..++++++++|+|||++++.+.. .+..... ....+.. .....
T Consensus 249 -~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~-~~~~~~~----------------~~~~~ 310 (360)
T 1tw3_A 249 -KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFN-EQFTELD----------------LRMLV 310 (360)
T ss_dssp -CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCS-HHHHHHH----------------HHHHH
T ss_pred -CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCc-chhhhcc----------------HHHhh
Confidence 49999999999999765 58999999999999999999877 3322110 1111110 00001
Q ss_pred HhHhhcCCHHHHHHHHHHcCCeEEEEeeecCC----eeeeEeeeC
Q 027517 182 SSIREFLTGKDLEKLALEIGFSRAKHYELSGG----LMGNLVATR 222 (222)
Q Consensus 182 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~----~~~~~~~~k 222 (222)
......++.++|.++++++||+++++...... ...++.++|
T Consensus 311 ~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (360)
T 1tw3_A 311 FLGGALRTREKWDGLAASAGLVVEEVRQLPSPTIPYDLSLLVLAP 355 (360)
T ss_dssp HHSCCCCBHHHHHHHHHHTTEEEEEEEEEECSSSSCEEEEEEEEE
T ss_pred hcCCcCCCHHHHHHHHHHCCCeEEEEEeCCCCcccCccEEEEEEe
Confidence 11134679999999999999999998877643 256666654
No 65
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.87 E-value=3.7e-22 Score=149.89 Aligned_cols=153 Identities=16% Similarity=0.136 Sum_probs=108.0
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhh-------------------------
Q 027517 31 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA------------------------- 85 (222)
Q Consensus 31 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~------------------------- 85 (222)
+..++.+|||||||+|.++..++.. + ..+|+++|+|+.+++.+++++......
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~-~-~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~ 129 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD-S-FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEE 129 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG-T-EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh-h-hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHH
Confidence 4456789999999999887765543 1 137999999999999998765321100
Q ss_pred -cCCCee-EEeCCCCCc-CC---CCCceeEEEEcccccCc----ccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHH
Q 027517 86 -CYKNIE-WVEGDALDL-PF---SDCFFDAITMGYGLRNV----VDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAI 155 (222)
Q Consensus 86 -~~~~i~-~~~~d~~~~-~~---~~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~ 155 (222)
...++. +.++|+.+. ++ ..++||+|++++++||+ ++...++++++++|||||.+++.+...... +.
T Consensus 130 ~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~-~~--- 205 (263)
T 2a14_A 130 KLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPS-YM--- 205 (263)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCE-EE---
T ss_pred HHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCcc-ce---
Confidence 001343 888998873 32 24689999999999985 456789999999999999999987543221 00
Q ss_pred HHHHhhcccccccccCChhHHHHHhHHhHhhcCCHHHHHHHHHHcCCeEEEEeeec
Q 027517 156 QEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 211 (222)
.+.. ......++.+++.++|+++||++++.....
T Consensus 206 ------------~g~~----------~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~ 239 (263)
T 2a14_A 206 ------------VGKR----------EFSCVALEKGEVEQAVLDAGFDIEQLLHSP 239 (263)
T ss_dssp ------------ETTE----------EEECCCCCHHHHHHHHHHTTEEEEEEEEEC
T ss_pred ------------eCCe----------EeeccccCHHHHHHHHHHCCCEEEEEeecc
Confidence 0000 000124689999999999999999887654
No 66
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.87 E-value=6e-23 Score=163.83 Aligned_cols=169 Identities=15% Similarity=0.137 Sum_probs=120.9
Q ss_pred HHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC
Q 027517 23 KRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF 102 (222)
Q Consensus 23 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 102 (222)
...+++.+...++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++.... ....+...+...+++
T Consensus 96 ~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~~~~~-----~~~~~~~~~~~~l~~ 167 (416)
T 4e2x_A 96 ARDFLATELTGPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREKGIRV-----RTDFFEKATADDVRR 167 (416)
T ss_dssp HHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTTTCCE-----ECSCCSHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHcCCCc-----ceeeechhhHhhccc
Confidence 344555566677889999999999999999875 459999999999999998772100 011112223333445
Q ss_pred CCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHH
Q 027517 103 SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKS 182 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (222)
++++||+|++.++++|++++..++++++++|||||++++..+.... . ..... +.....
T Consensus 168 ~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~------~---~~~~~-------------~~~~~~ 225 (416)
T 4e2x_A 168 TEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGD------I---VAKTS-------------FDQIFD 225 (416)
T ss_dssp HHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHH------H---HHHTC-------------GGGCST
T ss_pred CCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHH------h---hhhcc-------------hhhhhh
Confidence 5678999999999999999999999999999999999987654211 0 00000 000001
Q ss_pred hHhhcCCHHHHHHHHHHcCCeEEEEeeec--CCeeeeEeee
Q 027517 183 SIREFLTGKDLEKLALEIGFSRAKHYELS--GGLMGNLVAT 221 (222)
Q Consensus 183 ~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~--~~~~~~~~~~ 221 (222)
.+..+++.+++.++++++||++++...++ ++.+..++++
T Consensus 226 ~~~~~~s~~~l~~ll~~aGf~~~~~~~~~~~~g~l~~~~~~ 266 (416)
T 4e2x_A 226 EHFFLFSATSVQGMAQRCGFELVDVQRLPVHGGEVRYTLAR 266 (416)
T ss_dssp TCCEECCHHHHHHHHHHTTEEEEEEEEECGGGSEEEEEEEE
T ss_pred hhhhcCCHHHHHHHHHHcCCEEEEEEEccCCCCEEEEEEEe
Confidence 22346899999999999999999988865 6666666554
No 67
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.87 E-value=5.3e-21 Score=149.35 Aligned_cols=159 Identities=20% Similarity=0.268 Sum_probs=120.2
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEE
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 111 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~ 111 (222)
..+..+|||+|||+|..+..+++.+ ++.+++++|+ +.+++.+++. +++++..+|+.+ +.+ .||+|+
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~---------~~v~~~~~d~~~-~~p--~~D~v~ 251 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQVVENLSGS---------NNLTYVGGDMFT-SIP--NADAVL 251 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCB---------TTEEEEECCTTT-CCC--CCSEEE
T ss_pred cccCceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HHHHhhcccC---------CCcEEEeccccC-CCC--CccEEE
Confidence 3566899999999999999999885 6679999999 9999887763 469999999976 444 399999
Q ss_pred EcccccCcccHH--HHHHHHhcccCC---CcEEEEEecCCCCCchhh---HHHHHHhhcccccccccCChhHHHHHhHHh
Q 027517 112 MGYGLRNVVDKR--KALEESFRVLKP---GSRISVLDFNKSTQPFTT---AIQEWMIDNVVVPVASGYGLAEEYQYLKSS 183 (222)
Q Consensus 112 ~~~~l~~~~~~~--~~l~~~~~~l~~---gG~l~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (222)
+..++|++++.. .++++++++||| ||++++.+...+...... ....... .......
T Consensus 252 ~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d----------------~~~~~~~ 315 (352)
T 1fp2_A 252 LKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMD----------------VNMACLN 315 (352)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHH----------------HHGGGGT
T ss_pred eehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhcc----------------HHHHhcc
Confidence 999999998776 999999999999 999999987754432110 1111110 0000001
Q ss_pred HhhcCCHHHHHHHHHHcCCeEEEEeeecCCeeeeEeeeC
Q 027517 184 IREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 222 (222)
Q Consensus 184 ~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~k 222 (222)
.+.++.++|.++++++||+++++.... +...++.+++
T Consensus 316 -g~~~t~~e~~~ll~~aGf~~~~~~~~~-~~~~vie~~~ 352 (352)
T 1fp2_A 316 -GKERNEEEWKKLFIEAGFQHYKISPLT-GFLSLIEIYP 352 (352)
T ss_dssp -CCCEEHHHHHHHHHHTTCCEEEEEEEE-TTEEEEEEEC
T ss_pred -CCCCCHHHHHHHHHHCCCCeeEEEecC-CCcEEEEEeC
Confidence 234689999999999999999988754 4556777654
No 68
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.87 E-value=1e-20 Score=135.60 Aligned_cols=129 Identities=24% Similarity=0.280 Sum_probs=109.0
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEE
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 111 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~ 111 (222)
.+++.+|||+|||+|..+..+++. +.+++++|+++.+++.++++. +++.+.+.|+.+.+++.++||+|+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~~~D~i~ 112 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDF--------PEARWVVGDLSVDQISETDFDLIV 112 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC--------TTSEEEECCTTTSCCCCCCEEEEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhC--------CCCcEEEcccccCCCCCCceeEEE
Confidence 357789999999999999999876 458999999999999999875 478999999998777677899999
Q ss_pred Ec-ccccCc--ccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcC
Q 027517 112 MG-YGLRNV--VDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFL 188 (222)
Q Consensus 112 ~~-~~l~~~--~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (222)
+. .+++++ ++...+++++.++|+|||.+++...... .+
T Consensus 113 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~---------------------------------------~~ 153 (195)
T 3cgg_A 113 SAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGR---------------------------------------GW 153 (195)
T ss_dssp ECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS---------------------------------------SC
T ss_pred ECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC---------------------------------------Cc
Confidence 98 678877 4468899999999999999988654321 24
Q ss_pred CHHHHHHHHHHcCCeEEEEeee
Q 027517 189 TGKDLEKLALEIGFSRAKHYEL 210 (222)
Q Consensus 189 ~~~~~~~~l~~~Gf~~~~~~~~ 210 (222)
+.+++.++++++||++++....
T Consensus 154 ~~~~~~~~l~~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 154 VFGDFLEVAERVGLELENAFES 175 (195)
T ss_dssp CHHHHHHHHHHHTEEEEEEESS
T ss_pred CHHHHHHHHHHcCCEEeeeecc
Confidence 6789999999999999887654
No 69
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.87 E-value=3.2e-21 Score=147.44 Aligned_cols=185 Identities=17% Similarity=0.203 Sum_probs=122.5
Q ss_pred HHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC
Q 027517 22 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP 101 (222)
Q Consensus 22 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 101 (222)
....++..+...++ +|||+|||+|.++..+++. +.+|+++|+|+.+++.++++....+.....++.++++|+.+++
T Consensus 71 ~~~~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~ 146 (299)
T 3g2m_A 71 EAREFATRTGPVSG-PVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA 146 (299)
T ss_dssp HHHHHHHHHCCCCS-CEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC
T ss_pred HHHHHHHhhCCCCC-cEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC
Confidence 33455555554444 9999999999999999976 4689999999999999999876533211147999999999987
Q ss_pred CCCCceeEEEEc-ccccCcc--cHHHHHHHHhcccCCCcEEEEEecCCCCCch--hhHHHHHHh--------hcccccc-
Q 027517 102 FSDCFFDAITMG-YGLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQPF--TTAIQEWMI--------DNVVVPV- 167 (222)
Q Consensus 102 ~~~~~~D~v~~~-~~l~~~~--~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~--~~~~~~~~~--------~~~~~~~- 167 (222)
+ +++||+|++. .++++++ +...++++++++|+|||.+++..+....... ......+.. .......
T Consensus 147 ~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 225 (299)
T 3g2m_A 147 L-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAE 225 (299)
T ss_dssp C-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEE
T ss_pred c-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccc
Confidence 6 5789988864 6677665 4689999999999999999998876532100 000000000 0000000
Q ss_pred -cccCChh----HHHH-HhHHhHhhcCCHHHHHHHHHHcCCeEEEEeeec
Q 027517 168 -ASGYGLA----EEYQ-YLKSSIREFLTGKDLEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 168 -~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 211 (222)
....... .... .......++++++++.++|+++||++++...+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~ 275 (299)
T 3g2m_A 226 EIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFA 275 (299)
T ss_dssp EEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEEC
T ss_pred cEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecC
Confidence 0000000 0000 001123457899999999999999999998886
No 70
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.87 E-value=9.8e-22 Score=142.61 Aligned_cols=160 Identities=17% Similarity=0.190 Sum_probs=116.5
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEE
Q 027517 31 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAI 110 (222)
Q Consensus 31 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v 110 (222)
...++.+|||+|||+|..+..++.. .+.+++++|+|+.+++.++++....+ .++.+.+.|+.++++++++||+|
T Consensus 20 ~~~~~~~vLDiGcG~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v 93 (209)
T 2p8j_A 20 ESNLDKTVLDCGAGGDLPPLSIFVE--DGYKTYGIEISDLQLKKAENFSRENN----FKLNISKGDIRKLPFKDESMSFV 93 (209)
T ss_dssp HSSSCSEEEEESCCSSSCTHHHHHH--TTCEEEEEECCHHHHHHHHHHHHHHT----CCCCEEECCTTSCCSCTTCEEEE
T ss_pred ccCCCCEEEEECCCCCHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHHhcC----CceEEEECchhhCCCCCCceeEE
Confidence 3456789999999999985544444 35699999999999999998875433 47899999999988777889999
Q ss_pred EEcccccCc--ccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcC
Q 027517 111 TMGYGLRNV--VDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFL 188 (222)
Q Consensus 111 ~~~~~l~~~--~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (222)
++..+++|+ ++...++++++++|+|||.+++.++........... ............ .......++
T Consensus 94 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~----------~~~~~~~~~ 161 (209)
T 2p8j_A 94 YSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGE--KIGEGEFLQLER----------GEKVIHSYV 161 (209)
T ss_dssp EECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSE--EEETTEEEECC-----------CCCEEEEEE
T ss_pred EEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchh--hhccccceeccC----------CCceeEEec
Confidence 999999999 678899999999999999999988876443211000 000000000000 001122577
Q ss_pred CHHHHHHHHHHcCCeEEEEe
Q 027517 189 TGKDLEKLALEIGFSRAKHY 208 (222)
Q Consensus 189 ~~~~~~~~l~~~Gf~~~~~~ 208 (222)
+.+++.+++++.||...+..
T Consensus 162 ~~~e~~~~~~~~g~~~~~~~ 181 (209)
T 2p8j_A 162 SLEEADKYFKDMKVLFKEDR 181 (209)
T ss_dssp CHHHHHHTTTTSEEEEEEEE
T ss_pred CHHHHHHHHhhcCceeeeee
Confidence 99999999999999876544
No 71
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.86 E-value=3.1e-21 Score=138.86 Aligned_cols=148 Identities=18% Similarity=0.130 Sum_probs=116.5
Q ss_pred HHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCC
Q 027517 26 AVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDC 105 (222)
Q Consensus 26 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 105 (222)
+.+.+...++.+|||+|||+|..+..+++. +.+++++|+++.+++.++++....+. +++.+.+.|+.+.++ ++
T Consensus 24 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~d~~~~~~-~~ 96 (199)
T 2xvm_A 24 VLEAVKVVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENL---DNLHTRVVDLNNLTF-DR 96 (199)
T ss_dssp HHHHTTTSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTC---TTEEEEECCGGGCCC-CC
T ss_pred HHHHhhccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCC---CCcEEEEcchhhCCC-CC
Confidence 445555567789999999999999999876 45999999999999999988754432 479999999998776 67
Q ss_pred ceeEEEEcccccCcc--cHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHh
Q 027517 106 FFDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSS 183 (222)
Q Consensus 106 ~~D~v~~~~~l~~~~--~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (222)
+||+|++..+++|++ +...+++++.++|+|||.+++.+.......... . .
T Consensus 97 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~---------------~-------------~ 148 (199)
T 2xvm_A 97 QYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCT---------------V-------------G 148 (199)
T ss_dssp CEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCC---------------S-------------C
T ss_pred CceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCC---------------C-------------C
Confidence 899999999999997 789999999999999999888766543321000 0 0
Q ss_pred HhhcCCHHHHHHHHHHcCCeEEEEeee
Q 027517 184 IREFLTGKDLEKLALEIGFSRAKHYEL 210 (222)
Q Consensus 184 ~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 210 (222)
....++.+++.+++++ |++++..+.
T Consensus 149 ~~~~~~~~~l~~~~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 149 FPFAFKEGELRRYYEG--WERVKYNED 173 (199)
T ss_dssp CSCCBCTTHHHHHTTT--SEEEEEECC
T ss_pred CCCccCHHHHHHHhcC--CeEEEeccc
Confidence 1135688999999976 999886644
No 72
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.86 E-value=1e-20 Score=139.08 Aligned_cols=162 Identities=21% Similarity=0.246 Sum_probs=119.7
Q ss_pred HHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC--cCC
Q 027517 25 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD--LPF 102 (222)
Q Consensus 25 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~--~~~ 102 (222)
.+.+.+. .++.+|||+|||+|..+..+++. +.+++++|+++.+++.++++. ..+...|+.+ .++
T Consensus 24 ~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~~~~~~~~~~~~~----------~~~~~~d~~~~~~~~ 89 (230)
T 3cc8_A 24 NLLKHIK-KEWKEVLDIGCSSGALGAAIKEN---GTRVSGIEAFPEAAEQAKEKL----------DHVVLGDIETMDMPY 89 (230)
T ss_dssp HHHTTCC-TTCSEEEEETCTTSHHHHHHHTT---TCEEEEEESSHHHHHHHHTTS----------SEEEESCTTTCCCCS
T ss_pred HHHHHhc-cCCCcEEEeCCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC----------CcEEEcchhhcCCCC
Confidence 3444444 57789999999999999999876 369999999999999998764 2678888876 455
Q ss_pred CCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHH
Q 027517 103 SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKS 182 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (222)
++++||+|++..+++|++++..+++++.++|+|||.+++..+...... ............. .. .....
T Consensus 90 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~---~~~~~~~~~~~~~-~~--------~~~~~ 157 (230)
T 3cc8_A 90 EEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVSHIS---VLAPLLAGNWTYT-EY--------GLLDK 157 (230)
T ss_dssp CTTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSHH---HHHHHHTTCCCCB-SS--------STTBT
T ss_pred CCCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchHH---HHHHHhcCCceec-cC--------CCCCc
Confidence 667899999999999999999999999999999999999876653321 1111111111000 00 00011
Q ss_pred hHhhcCCHHHHHHHHHHcCCeEEEEeeecC
Q 027517 183 SIREFLTGKDLEKLALEIGFSRAKHYELSG 212 (222)
Q Consensus 183 ~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 212 (222)
.+.+.++.+++.++++++||++++......
T Consensus 158 ~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 187 (230)
T 3cc8_A 158 THIRFFTFNEMLRMFLKAGYSISKVDRVYV 187 (230)
T ss_dssp TCCCCCCHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred ceEEEecHHHHHHHHHHcCCeEEEEEeccc
Confidence 223568999999999999999998877554
No 73
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.86 E-value=8.1e-21 Score=141.28 Aligned_cols=146 Identities=17% Similarity=0.168 Sum_probs=109.2
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhh---------hhh-----hcCCCeeEEeCC
Q 027517 31 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDL---------VSK-----ACYKNIEWVEGD 96 (222)
Q Consensus 31 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~---------~~~-----~~~~~i~~~~~d 96 (222)
...++.+|||+|||+|..+..|++. +.+|+|+|+|+.+++.++++... ... ....++.+.++|
T Consensus 65 ~~~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D 141 (252)
T 2gb4_A 65 KGQSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCS 141 (252)
T ss_dssp TTCCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC
T ss_pred cCCCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECc
Confidence 3356789999999999999999976 56999999999999999766421 000 011589999999
Q ss_pred CCCcCCCC-CceeEEEEcccccCcc--cHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCCh
Q 027517 97 ALDLPFSD-CFFDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGL 173 (222)
Q Consensus 97 ~~~~~~~~-~~~D~v~~~~~l~~~~--~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (222)
+.+++.+. ++||+|++..++++++ +...+++++.++|||||++++.+........ .+.
T Consensus 142 ~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~----------------~g~--- 202 (252)
T 2gb4_A 142 IFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKH----------------AGP--- 202 (252)
T ss_dssp TTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSC----------------CCS---
T ss_pred cccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccC----------------CCC---
Confidence 99987653 7899999999999885 4567999999999999999765544221100 000
Q ss_pred hHHHHHhHHhHhhcCCHHHHHHHHHHcCCeEEEEeee
Q 027517 174 AEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYEL 210 (222)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 210 (222)
...++++++.+++++ +|+++.....
T Consensus 203 -----------~~~~~~~el~~~l~~-~f~v~~~~~~ 227 (252)
T 2gb4_A 203 -----------PFYVPSAELKRLFGT-KCSMQCLEEV 227 (252)
T ss_dssp -----------SCCCCHHHHHHHHTT-TEEEEEEEEE
T ss_pred -----------CCCCCHHHHHHHhhC-CeEEEEEecc
Confidence 012588999999987 5998876654
No 74
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.86 E-value=1.1e-21 Score=149.34 Aligned_cols=156 Identities=17% Similarity=0.247 Sum_probs=109.4
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhh----------------------------
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA---------------------------- 85 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~---------------------------- 85 (222)
++.+|||||||+|..+..+++.+ +..+|+|+|+++.+++.|+++.......
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~-~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKW-GPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHT-CCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 67899999999999999999986 4569999999999999999886543210
Q ss_pred ---------------------------cCCCeeEEeCCCCCcC-----CCCCceeEEEEcccccCcc------cHHHHHH
Q 027517 86 ---------------------------CYKNIEWVEGDALDLP-----FSDCFFDAITMGYGLRNVV------DKRKALE 127 (222)
Q Consensus 86 ---------------------------~~~~i~~~~~d~~~~~-----~~~~~~D~v~~~~~l~~~~------~~~~~l~ 127 (222)
...++.+.++|+.... +..++||+|+|..+++|+. +...+++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 0147999999987643 4567899999999997763 6788999
Q ss_pred HHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcCCHHHHHHHHHH--cCCeEE
Q 027517 128 ESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALE--IGFSRA 205 (222)
Q Consensus 128 ~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~Gf~~~ 205 (222)
+++++|+|||.|++.... +.. .... ... .. ........-.+.++++.++|.+ +||+.+
T Consensus 205 ~~~~~LkpGG~lil~~~~-----~~~-y~~~----------~~~--~~--~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~ 264 (292)
T 3g07_A 205 RIYRHLRPGGILVLEPQP-----WSS-YGKR----------KTL--TE--TIYKNYYRIQLKPEQFSSYLTSPDVGFSSY 264 (292)
T ss_dssp HHHHHEEEEEEEEEECCC-----HHH-HHTT----------TTS--CH--HHHHHHHHCCCCGGGHHHHHTSTTTCCCEE
T ss_pred HHHHHhCCCcEEEEecCC-----chh-hhhh----------hcc--cH--HHHhhhhcEEEcHHHHHHHHHhcCCCceEE
Confidence 999999999999885321 110 0000 000 00 0001111224568899999999 999888
Q ss_pred EEeee
Q 027517 206 KHYEL 210 (222)
Q Consensus 206 ~~~~~ 210 (222)
+....
T Consensus 265 ~~~~~ 269 (292)
T 3g07_A 265 ELVAT 269 (292)
T ss_dssp EEC--
T ss_pred EEecc
Confidence 77654
No 75
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.86 E-value=1.2e-20 Score=143.80 Aligned_cols=125 Identities=23% Similarity=0.251 Sum_probs=102.3
Q ss_pred hhhHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhh-hhcCCCeeEEeCC
Q 027517 18 QHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVS-KACYKNIEWVEGD 96 (222)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~d 96 (222)
....+...+...+...++.+|||+|||+|..+..+++. +.+++++|+|+.+++.++++..... .....++.+...|
T Consensus 41 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d 117 (293)
T 3thr_A 41 RTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEAN 117 (293)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECC
T ss_pred hHHHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecC
Confidence 33556677777776677889999999999999999876 4599999999999999987652211 0011478899999
Q ss_pred CCCcC---CCCCceeEEEEc-ccccCccc-------HHHHHHHHhcccCCCcEEEEEecC
Q 027517 97 ALDLP---FSDCFFDAITMG-YGLRNVVD-------KRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 97 ~~~~~---~~~~~~D~v~~~-~~l~~~~~-------~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
+.+++ +++++||+|++. .+++|+++ ...++++++++|||||++++..++
T Consensus 118 ~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 118 WLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp GGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 98876 667889999998 89999998 899999999999999999987654
No 76
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.86 E-value=4.6e-21 Score=140.76 Aligned_cols=106 Identities=30% Similarity=0.463 Sum_probs=91.9
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
.++.+|||+|||+|..+..+++.. .+++++|+++.+++.++++....+ .++.+.++|+.++++++++||+|++
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~~~~~~D~v~~ 109 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKSRE----SNVEFIVGDARKLSFEDKTFDYVIF 109 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT----CCCEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcC----CCceEEECchhcCCCCCCcEEEEEE
Confidence 457899999999999999888763 389999999999999998875443 5899999999988777778999999
Q ss_pred ccc--ccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 113 GYG--LRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 113 ~~~--l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
+.+ +++.++...++++++++|+|||.+++.++.
T Consensus 110 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 110 IDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp ESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 999 666677889999999999999999998765
No 77
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.85 E-value=5.2e-21 Score=146.25 Aligned_cols=111 Identities=20% Similarity=0.302 Sum_probs=96.1
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCC------Cc
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD------CF 106 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~------~~ 106 (222)
.++.+|||+|||+|..+..+++.+.+..+++++|+|+.+++.++++..... ....++.++++|+.+++++. ++
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 113 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSP-DTYKNVSFKISSSDDFKFLGADSVDKQK 113 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC--CCTTEEEEECCTTCCGGGCTTTTTSSC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcc-CCCCceEEEEcCHHhCCccccccccCCC
Confidence 578899999999999999999875467799999999999999999875430 11268999999999987665 78
Q ss_pred eeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 107 FDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 107 ~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
||+|++..+++|+ ++..+++++.++|+|||.+++.++.
T Consensus 114 fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 114 IDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp EEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred eeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecC
Confidence 9999999999999 9999999999999999999985544
No 78
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.85 E-value=2.8e-20 Score=135.16 Aligned_cols=135 Identities=25% Similarity=0.337 Sum_probs=106.2
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCC-cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
++.+|||+|||+|..+..+ +. +++++|+++.+++.++++. +++.+.+.|+.++++++++||+|++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l------~~~~v~~vD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~~fD~v~~ 101 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL------PYPQKVGVEPSEAMLAVGRRRA--------PEATWVRAWGEALPFPGESFDVVLL 101 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC------CCSEEEEECCCHHHHHHHHHHC--------TTSEEECCCTTSCCSCSSCEEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC------CCCeEEEEeCCHHHHHHHHHhC--------CCcEEEEcccccCCCCCCcEEEEEE
Confidence 7789999999999998776 34 8999999999999999875 4789999999998887788999999
Q ss_pred cccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcCCHHH
Q 027517 113 GYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKD 192 (222)
Q Consensus 113 ~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (222)
..+++|++++..+++++.++|||||.+++.++..... +.... ....... .....+.+++|.++
T Consensus 102 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~-~~~~~-~~~~~~~---------------~~~~~~~~~~s~~~ 164 (211)
T 2gs9_A 102 FTTLEFVEDVERVLLEARRVLRPGGALVVGVLEALSP-WAALY-RRLGEKG---------------VLPWAQARFLARED 164 (211)
T ss_dssp ESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTTSH-HHHHH-HHHHHTT---------------CTTGGGCCCCCHHH
T ss_pred cChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCcCc-HHHHH-HHHhhcc---------------CccccccccCCHHH
Confidence 9999999999999999999999999999988775432 11111 1110000 00012345789999
Q ss_pred HHHHHHHcC
Q 027517 193 LEKLALEIG 201 (222)
Q Consensus 193 ~~~~l~~~G 201 (222)
+.++++ |
T Consensus 165 l~~~l~--G 171 (211)
T 2gs9_A 165 LKALLG--P 171 (211)
T ss_dssp HHHHHC--S
T ss_pred HHHHhc--C
Confidence 999998 7
No 79
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.85 E-value=2.2e-20 Score=146.17 Aligned_cols=159 Identities=20% Similarity=0.259 Sum_probs=119.7
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
.+..+|||+|||+|.++..+++.+ ++.+++++|+ +.+++.+++. +++++..+|+.+ +.+ +||+|++
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~---------~~v~~~~~d~~~-~~~--~~D~v~~ 257 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTGN---------ENLNFVGGDMFK-SIP--SADAVLL 257 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCCC---------SSEEEEECCTTT-CCC--CCSEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhcccC---------CCcEEEeCccCC-CCC--CceEEEE
Confidence 456799999999999999999985 6779999999 7888776652 469999999987 554 4999999
Q ss_pred cccccCcccHH--HHHHHHhcccCC---CcEEEEEecCCCCCchh---hHHHHHHhhcccccccccCChhHHHHHhHHhH
Q 027517 113 GYGLRNVVDKR--KALEESFRVLKP---GSRISVLDFNKSTQPFT---TAIQEWMIDNVVVPVASGYGLAEEYQYLKSSI 184 (222)
Q Consensus 113 ~~~l~~~~~~~--~~l~~~~~~l~~---gG~l~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (222)
..++|++++.. .++++++++|+| ||++++.+...+..... ........ ........
T Consensus 258 ~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d----------------~~~~~~~~ 321 (358)
T 1zg3_A 258 KWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYD----------------LVMLTMFL 321 (358)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHH----------------HHHHHHHS
T ss_pred cccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhC----------------HHHhccCC
Confidence 99999998866 999999999999 99999988765433211 01111110 11111111
Q ss_pred hhcCCHHHHHHHHHHcCCeEEEEeeecCCeeeeEeeeC
Q 027517 185 REFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 222 (222)
Q Consensus 185 ~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~k 222 (222)
.+.++.++|.++++++||+++++... .+...++.+++
T Consensus 322 g~~~t~~e~~~ll~~aGf~~~~~~~~-~~~~~vie~~~ 358 (358)
T 1zg3_A 322 GKERTKQEWEKLIYDAGFSSYKITPI-SGFKSLIEVYP 358 (358)
T ss_dssp CCCEEHHHHHHHHHHTTCCEEEEEEE-TTTEEEEEEEC
T ss_pred CCCCCHHHHHHHHHHcCCCeeEEEec-CCCcEEEEEeC
Confidence 34579999999999999999998875 44556777664
No 80
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.85 E-value=2.7e-20 Score=135.59 Aligned_cols=109 Identities=17% Similarity=0.133 Sum_probs=91.6
Q ss_pred hhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc---CCCCC
Q 027517 29 WSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL---PFSDC 105 (222)
Q Consensus 29 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~---~~~~~ 105 (222)
.+...|+.+|||+|||+|.++.++++..++.++|+++|+++++++.++++.... +|+..+..|.... +...+
T Consensus 72 ~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~-----~ni~~V~~d~~~p~~~~~~~~ 146 (233)
T 4df3_A 72 ELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR-----RNIFPILGDARFPEKYRHLVE 146 (233)
T ss_dssp CCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC-----TTEEEEESCTTCGGGGTTTCC
T ss_pred hcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh-----cCeeEEEEeccCccccccccc
Confidence 356789999999999999999999999999999999999999999998876543 5899999888653 34557
Q ss_pred ceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 106 FFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 106 ~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
++|+|++.. .+..+...++.++++.|||||++++...
T Consensus 147 ~vDvVf~d~--~~~~~~~~~l~~~~r~LKpGG~lvI~ik 183 (233)
T 4df3_A 147 GVDGLYADV--AQPEQAAIVVRNARFFLRDGGYMLMAIK 183 (233)
T ss_dssp CEEEEEECC--CCTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEEEEec--cCChhHHHHHHHHHHhccCCCEEEEEEe
Confidence 899998743 4446678899999999999999988653
No 81
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.85 E-value=4.5e-20 Score=140.83 Aligned_cols=174 Identities=17% Similarity=0.240 Sum_probs=118.5
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC-CCCceeEE
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF-SDCFFDAI 110 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~D~v 110 (222)
..++.+|||+|||+|..+..+++. +..+++++|+++.+++.++++....+.. .++.++++|+.+.++ ++++||+|
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~fD~v 137 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA--GIGEYYGVDIAEVSINDARVRARNMKRR--FKVFFRAQDSYGRHMDLGKEFDVI 137 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH--TCSEEEEEESCHHHHHHHHHHHHTSCCS--SEEEEEESCTTTSCCCCSSCEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHhcCCC--ccEEEEECCccccccCCCCCcCEE
Confidence 467789999999999999988876 2458999999999999999887543221 368999999998776 56789999
Q ss_pred EEcccccC----cccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHH-Hhhcccc-cccc--cCCh--hHHHH--
Q 027517 111 TMGYGLRN----VVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEW-MIDNVVV-PVAS--GYGL--AEEYQ-- 178 (222)
Q Consensus 111 ~~~~~l~~----~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~--~~~~--~~~~~-- 178 (222)
++..++++ .++...+++++.++|+|||.+++..+.... ....+... +...... .... .... ...|.
T Consensus 138 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 215 (298)
T 1ri5_A 138 SSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDV--ILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFT 215 (298)
T ss_dssp EEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHH--HHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEE
T ss_pred EECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHH--HHHHHccCccCCeeEEEEeCccccccccccceEEEE
Confidence 99999977 466789999999999999999998755311 10000000 0000000 0000 0000 00000
Q ss_pred ---HhHHhHhhcCCHHHHHHHHHHcCCeEEEEeeec
Q 027517 179 ---YLKSSIREFLTGKDLEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 179 ---~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 211 (222)
.......++++++++.++++++||++++...+.
T Consensus 216 l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~~ 251 (298)
T 1ri5_A 216 LLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGFI 251 (298)
T ss_dssp ETTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEHH
T ss_pred EchhhcCCcccccCHHHHHHHHHHcCCEEEEecCHH
Confidence 000112356799999999999999999887653
No 82
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.85 E-value=6.4e-21 Score=142.08 Aligned_cols=102 Identities=22% Similarity=0.298 Sum_probs=90.4
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEEc
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMG 113 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~ 113 (222)
.+.+|||||||+|..+..+++. +.+|+|+|+|+.|++.++++ +++.+.++|++++++++++||+|++.
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~~---------~~v~~~~~~~e~~~~~~~sfD~v~~~ 106 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALRH---------PRVTYAVAPAEDTGLPPASVDVAIAA 106 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCCC---------TTEEEEECCTTCCCCCSSCEEEEEEC
T ss_pred CCCCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhhc---------CCceeehhhhhhhcccCCcccEEEEe
Confidence 4569999999999999999865 46899999999999988765 58999999999999988999999999
Q ss_pred ccccCcccHHHHHHHHhcccCCCcEEEEEecCCCC
Q 027517 114 YGLRNVVDKRKALEESFRVLKPGSRISVLDFNKST 148 (222)
Q Consensus 114 ~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~ 148 (222)
.++|++ ++.+++++++++|||||.+++..+....
T Consensus 107 ~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~~ 140 (257)
T 4hg2_A 107 QAMHWF-DLDRFWAELRRVARPGAVFAAVTYGLTR 140 (257)
T ss_dssp SCCTTC-CHHHHHHHHHHHEEEEEEEEEEEECCCB
T ss_pred eehhHh-hHHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 999877 4688999999999999999998776543
No 83
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.85 E-value=1.7e-20 Score=135.35 Aligned_cols=144 Identities=15% Similarity=0.149 Sum_probs=111.5
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
+++ +|||+|||+|..+..+++. +.+++++|+++.+++.++++....+ .++.+.+.|+.+.++++++||+|++
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~ 100 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKG----VKITTVQSNLADFDIVADAWEGIVS 100 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHT----CCEEEECCBTTTBSCCTTTCSEEEE
T ss_pred CCC-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcC----CceEEEEcChhhcCCCcCCccEEEE
Confidence 456 9999999999999998865 4599999999999999998875443 3789999999988877788999999
Q ss_pred cccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcCCHHH
Q 027517 113 GYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKD 192 (222)
Q Consensus 113 ~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (222)
.....+..+...+++++.++|+|||.+++.++........ . ... ......+++++
T Consensus 101 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~-------~-------~~~-----------~~~~~~~~~~~ 155 (202)
T 2kw5_A 101 IFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYN-------T-------GGP-----------KDLDLLPKLET 155 (202)
T ss_dssp ECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGT-------S-------CCS-----------SSGGGCCCHHH
T ss_pred EhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCC-------C-------CCC-----------CcceeecCHHH
Confidence 6532223567899999999999999999988775442110 0 000 01124689999
Q ss_pred HHHHHHHcCCeEEEEeeec
Q 027517 193 LEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 193 ~~~~l~~~Gf~~~~~~~~~ 211 (222)
+.++++ ||++++.....
T Consensus 156 l~~~l~--Gf~v~~~~~~~ 172 (202)
T 2kw5_A 156 LQSELP--SLNWLIANNLE 172 (202)
T ss_dssp HHHHCS--SSCEEEEEEEE
T ss_pred HHHHhc--CceEEEEEEEE
Confidence 999998 99998766543
No 84
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.84 E-value=6.2e-21 Score=145.14 Aligned_cols=150 Identities=11% Similarity=0.138 Sum_probs=105.8
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhh--------------hhc-------------
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVS--------------KAC------------- 86 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--------------~~~------------- 86 (222)
++.+|||+|||+|.....++.. ...+|+++|+|+.+++.+++++.... ...
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS--HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG--GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhcc--CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 6789999999999954433332 34599999999999999887543210 000
Q ss_pred CCCeeEEeCCCCC-cCC-----CCCceeEEEEcccccC----cccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHH
Q 027517 87 YKNIEWVEGDALD-LPF-----SDCFFDAITMGYGLRN----VVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQ 156 (222)
Q Consensus 87 ~~~i~~~~~d~~~-~~~-----~~~~~D~v~~~~~l~~----~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~ 156 (222)
...+.++..|+.+ .++ ++++||+|++++++++ ++++..++++++++|||||++++........
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~------- 221 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESW------- 221 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCE-------
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcce-------
Confidence 0014677778877 443 3456999999999999 6678999999999999999999975332110
Q ss_pred HHHhhcccccccccCChhHHHHHhHHhHhhcCCHHHHHHHHHHcCCeEEEEeeec
Q 027517 157 EWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 211 (222)
+. . .. .......++.+++.++|+++||++++.....
T Consensus 222 --~~-----~-~~-----------~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 222 --YL-----A-GE-----------ARLTVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp --EE-----E-TT-----------EEEECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred --EE-----c-CC-----------eeeeeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 00 0 00 0001235799999999999999998877655
No 85
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.84 E-value=1.4e-20 Score=141.33 Aligned_cols=152 Identities=17% Similarity=0.149 Sum_probs=112.6
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhh--------------h------------
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK--------------A------------ 85 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--------------~------------ 85 (222)
..++.+|||+|||+|..+..+++.. . .+|+++|+|+.+++.++++...... .
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~~-~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACES-F-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGGT-E-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred ccCCCEEEEECCCccHHHHHHhhcc-c-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 3566799999999999998887652 2 3899999999999999887643210 0
Q ss_pred cCCCe-eEEeCCCCCcCC-CC---CceeEEEEccccc----CcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHH
Q 027517 86 CYKNI-EWVEGDALDLPF-SD---CFFDAITMGYGLR----NVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQ 156 (222)
Q Consensus 86 ~~~~i-~~~~~d~~~~~~-~~---~~~D~v~~~~~l~----~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~ 156 (222)
...++ .+.+.|+.+... +. ++||+|++..+++ +.+++..+++++.++|||||.+++.+...... +
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~-~----- 205 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSY-Y----- 205 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCE-E-----
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCce-E-----
Confidence 00127 899999987542 44 7899999999999 66678999999999999999999987543210 0
Q ss_pred HHHhhcccccccccCChhHHHHHhHHhHhhcCCHHHHHHHHHHcCCeEEEEeeec
Q 027517 157 EWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 211 (222)
.. .. .......++.+++.++++++||++++.....
T Consensus 206 ---~~-------~~----------~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 206 ---MI-------GE----------QKFSSLPLGWETVRDAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp ---EE-------TT----------EEEECCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred ---Ec-------CC----------ccccccccCHHHHHHHHHHCCCEEEEEEEec
Confidence 00 00 0001235688999999999999999888765
No 86
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.84 E-value=8.8e-20 Score=136.07 Aligned_cols=110 Identities=29% Similarity=0.430 Sum_probs=88.6
Q ss_pred HhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCce
Q 027517 28 SWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFF 107 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 107 (222)
......++.+|||+|||+|..+..+++. +.+++++|+|+.+++.++++....+ .++.+.++|+.+++.+ ++|
T Consensus 35 ~~~~~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~----~~v~~~~~d~~~~~~~-~~f 106 (252)
T 1wzn_A 35 KEDAKREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERN----LKIEFLQGDVLEIAFK-NEF 106 (252)
T ss_dssp HHTCSSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTT----CCCEEEESCGGGCCCC-SCE
T ss_pred HHhcccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcC----CceEEEECChhhcccC-CCc
Confidence 3334456789999999999999999875 4689999999999999998875433 4789999999987655 679
Q ss_pred eEEEEccc-ccCc--ccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 108 DAITMGYG-LRNV--VDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 108 D~v~~~~~-l~~~--~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
|+|++.+. ++++ ++...++++++++|+|||.+++..+.
T Consensus 107 D~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 107 DAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp EEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 99998643 4444 35688999999999999999875543
No 87
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.84 E-value=8.7e-20 Score=132.95 Aligned_cols=126 Identities=21% Similarity=0.269 Sum_probs=102.2
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEE
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 111 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~ 111 (222)
..++.+|||+|||+|..+..+. .+++++|+++. ++.+.++|+.++++++++||+|+
T Consensus 65 ~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~------------------~~~~~~~d~~~~~~~~~~fD~v~ 120 (215)
T 2zfu_A 65 RPASLVVADFGCGDCRLASSIR------NPVHCFDLASL------------------DPRVTVCDMAQVPLEDESVDVAV 120 (215)
T ss_dssp SCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS------------------STTEEESCTTSCSCCTTCEEEEE
T ss_pred cCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC------------------CceEEEeccccCCCCCCCEeEEE
Confidence 4567899999999999987662 48999999986 35678889988887778899999
Q ss_pred EcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcCCHH
Q 027517 112 MGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGK 191 (222)
Q Consensus 112 ~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (222)
+..++|+ +++..+++++.++|+|||.+++.++.. ...+.+
T Consensus 121 ~~~~l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~~---------------------------------------~~~~~~ 160 (215)
T 2zfu_A 121 FCLSLMG-TNIRDFLEEANRVLKPGGLLKVAEVSS---------------------------------------RFEDVR 160 (215)
T ss_dssp EESCCCS-SCHHHHHHHHHHHEEEEEEEEEEECGG---------------------------------------GCSCHH
T ss_pred Eehhccc-cCHHHHHHHHHHhCCCCeEEEEEEcCC---------------------------------------CCCCHH
Confidence 9999974 888999999999999999999986442 123778
Q ss_pred HHHHHHHHcCCeEEEEeeecCCeeeeEeeeC
Q 027517 192 DLEKLALEIGFSRAKHYELSGGLMGNLVATR 222 (222)
Q Consensus 192 ~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~k 222 (222)
++.++++++||++++.. ...+.+.+++++|
T Consensus 161 ~~~~~l~~~Gf~~~~~~-~~~~~~~~~~~~k 190 (215)
T 2zfu_A 161 TFLRAVTKLGFKIVSKD-LTNSHFFLFDFQK 190 (215)
T ss_dssp HHHHHHHHTTEEEEEEE-CCSTTCEEEEEEE
T ss_pred HHHHHHHHCCCEEEEEe-cCCCeEEEEEEEe
Confidence 99999999999998854 4444555666554
No 88
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.84 E-value=1.8e-19 Score=135.70 Aligned_cols=156 Identities=13% Similarity=0.048 Sum_probs=113.2
Q ss_pred HHHHHhhC-CCCCCeEEEecCCC---ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC
Q 027517 24 RMAVSWSG-AKTGDNVLDVCCGS---GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 99 (222)
Q Consensus 24 ~~~~~~~~-~~~~~~vLdiG~G~---G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 99 (222)
..++..+. ..+..+|||||||+ |.++..+.+. .++.+|+++|+|+.+++.+++++... .++.++++|+.+
T Consensus 66 ~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~-~p~~~v~~vD~sp~~l~~Ar~~~~~~-----~~v~~~~~D~~~ 139 (274)
T 2qe6_A 66 VRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSV-NPDARVVYVDIDPMVLTHGRALLAKD-----PNTAVFTADVRD 139 (274)
T ss_dssp HHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHH-CTTCEEEEEESSHHHHHHHHHHHTTC-----TTEEEEECCTTC
T ss_pred HHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHh-CCCCEEEEEECChHHHHHHHHhcCCC-----CCeEEEEeeCCC
Confidence 33344443 34457999999999 9887766665 46789999999999999999887421 589999999976
Q ss_pred cC-----------CCCCceeEEEEcccccCccc--HHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhccccc
Q 027517 100 LP-----------FSDCFFDAITMGYGLRNVVD--KRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVP 166 (222)
Q Consensus 100 ~~-----------~~~~~~D~v~~~~~l~~~~~--~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (222)
.+ ++..+||+|++..++||+++ +..++++++++|+|||+|++.+...............
T Consensus 140 ~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~~~~~~~~~~~-------- 211 (274)
T 2qe6_A 140 PEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTGLPAQQKLARI-------- 211 (274)
T ss_dssp HHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSSCHHHHHHHHH--------
T ss_pred chhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcchHHHHHHHHH--------
Confidence 31 22347999999999999986 8999999999999999999998876431111111111
Q ss_pred ccccCChhHHHHHhHHhHhhcCCHHHHHHHHHHcCCeEEE
Q 027517 167 VASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAK 206 (222)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 206 (222)
|.... ....+++.+++.+++ .||++++
T Consensus 212 ----------~~~~~-~~~~~~s~~ei~~~l--~G~~l~~ 238 (274)
T 2qe6_A 212 ----------TRENL-GEGWARTPEEIERQF--GDFELVE 238 (274)
T ss_dssp ----------HHHHH-SCCCCBCHHHHHHTT--TTCEECT
T ss_pred ----------HHhcC-CCCccCCHHHHHHHh--CCCeEcc
Confidence 11000 012457999999999 5998775
No 89
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.83 E-value=6.2e-19 Score=127.40 Aligned_cols=119 Identities=16% Similarity=0.077 Sum_probs=98.4
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 99 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 99 (222)
+..+..++..+...++.+|||+|||+|..+..+++. .+..+++++|+++.+++.++++....+. .++.++++|+.+
T Consensus 26 ~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~ 101 (204)
T 3e05_A 26 QEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNL-MPNGRIFALERNPQYLGFIRDNLKKFVA---RNVTLVEAFAPE 101 (204)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHH-CTTSEEEEEECCHHHHHHHHHHHHHHTC---TTEEEEECCTTT
T ss_pred HHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHH-CCCCEEEEEeCCHHHHHHHHHHHHHhCC---CcEEEEeCChhh
Confidence 344456677778888999999999999999999988 4567999999999999999998765443 589999999976
Q ss_pred cCCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 100 LPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 100 ~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
.....++||+|++..+++ +...+++++.++|+|||++++....
T Consensus 102 ~~~~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 102 GLDDLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp TCTTSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred hhhcCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 443336799999988775 6788999999999999999986533
No 90
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.83 E-value=2.1e-19 Score=132.28 Aligned_cols=151 Identities=14% Similarity=0.097 Sum_probs=108.6
Q ss_pred HHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC----cCC
Q 027517 27 VSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD----LPF 102 (222)
Q Consensus 27 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~----~~~ 102 (222)
++.+...++.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.++++.... .++.++.+|+.+ .++
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~-----~~v~~~~~d~~~~~~~~~~ 140 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER-----ENIIPILGDANKPQEYANI 140 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC-----TTEEEEECCTTCGGGGTTT
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC-----CCeEEEECCCCCccccccc
Confidence 3444566788999999999999999999864 569999999999999998876433 589999999987 555
Q ss_pred CCCceeEEEEcccccCcccH---HHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHH
Q 027517 103 SDCFFDAITMGYGLRNVVDK---RKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQY 179 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~~~~~---~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (222)
+ ++||+|+ ++++++ ..+++++.+.|+|||.+++. +............
T Consensus 141 ~-~~~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~-~~~~~~~~~~~~~----------------------- 190 (230)
T 1fbn_A 141 V-EKVDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA-IKARSIDVTKDPK----------------------- 190 (230)
T ss_dssp S-CCEEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCSSSCHH-----------------------
T ss_pred C-ccEEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE-EecCCCCCCCCHH-----------------------
Confidence 5 6899999 344444 77799999999999999886 2211000000000
Q ss_pred hHHhHhhcCCHHHHHHHHHHcCCeEEEEeeecCC--eeeeEeee
Q 027517 180 LKSSIREFLTGKDLEKLALEIGFSRAKHYELSGG--LMGNLVAT 221 (222)
Q Consensus 180 ~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~--~~~~~~~~ 221 (222)
.+..+++. +|+++||++++....... ....++++
T Consensus 191 -------~~~~~~l~-~l~~~Gf~~~~~~~~~~~~~~~~~v~~~ 226 (230)
T 1fbn_A 191 -------EIFKEQKE-ILEAGGFKIVDEVDIEPFEKDHVMFVGI 226 (230)
T ss_dssp -------HHHHHHHH-HHHHHTEEEEEEEECTTTSTTEEEEEEE
T ss_pred -------HhhHHHHH-HHHHCCCEEEEEEccCCCccceEEEEEE
Confidence 01236777 899999999988776543 23345554
No 91
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.83 E-value=3.8e-19 Score=134.36 Aligned_cols=155 Identities=15% Similarity=0.189 Sum_probs=121.2
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 99 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 99 (222)
..+...+++.+. .++.+|||+|||+|..+..+++.. +..+++++|+|+.+++.++++....+. .++.+.++|+.+
T Consensus 96 e~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~---~~v~~~~~d~~~ 170 (276)
T 2b3t_A 96 ECLVEQALARLP-EQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAI---KNIHILQSDWFS 170 (276)
T ss_dssp HHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTC---CSEEEECCSTTG
T ss_pred HHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEEcchhh
Confidence 334455555554 567799999999999999999875 567999999999999999998765543 479999999987
Q ss_pred cCCCCCceeEEEEcccccCc-------------------------ccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhH
Q 027517 100 LPFSDCFFDAITMGYGLRNV-------------------------VDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTA 154 (222)
Q Consensus 100 ~~~~~~~~D~v~~~~~l~~~-------------------------~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~ 154 (222)
. .+.++||+|+++..+... .....+++.+.+.|+|||.+++...
T Consensus 171 ~-~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~---------- 239 (276)
T 2b3t_A 171 A-LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG---------- 239 (276)
T ss_dssp G-GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC----------
T ss_pred h-cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC----------
Confidence 4 335689999998544322 2347789999999999999987521
Q ss_pred HHHHHhhcccccccccCChhHHHHHhHHhHhhcCCHHHHHHHHHHcCCeEEEEeeecCCeeeeEeeeC
Q 027517 155 IQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 222 (222)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~k 222 (222)
..+.+++.++++++||+.++......|...+++++|
T Consensus 240 --------------------------------~~~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~~~~~ 275 (276)
T 2b3t_A 240 --------------------------------WQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRY 275 (276)
T ss_dssp --------------------------------SSCHHHHHHHHHHTTCTTCCEEECTTSSEEEEEEEC
T ss_pred --------------------------------chHHHHHHHHHHHCCCcEEEEEecCCCCCcEEEEEE
Confidence 124578899999999999888888888888888775
No 92
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.82 E-value=1.6e-19 Score=134.14 Aligned_cols=159 Identities=20% Similarity=0.206 Sum_probs=114.9
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCC-----Cc
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD-----CF 106 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-----~~ 106 (222)
..++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.++++... .++.++++|+.+++... .+
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~---~~v~gvD~s~~~~~~a~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~~ 124 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFF---PRVIGLDVSKSALEIAAKENTA------ANISYRLLDGLVPEQAAQIHSEIG 124 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHS---SCEEEEESCHHHHHHHHHHSCC------TTEEEEECCTTCHHHHHHHHHHHC
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhC---CCEEEEECCHHHHHHHHHhCcc------cCceEEECcccccccccccccccC
Confidence 4677899999999999999999873 2899999999999999987621 48999999998864321 24
Q ss_pred eeEEEEcccccCcc--cHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHH-h
Q 027517 107 FDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKS-S 183 (222)
Q Consensus 107 ~D~v~~~~~l~~~~--~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 183 (222)
||+|++..++++++ +...++++++++|||||++++.++................ -.+ . ........ .
T Consensus 125 ~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~---~~~------~-~~~~~~~~~~ 194 (245)
T 3ggd_A 125 DANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYG---QLP------Y-ELLLVMEHGI 194 (245)
T ss_dssp SCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHS---SCC------H-HHHHHHTTTC
T ss_pred ccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCC---CCc------h-hhhhccccCC
Confidence 89999999999998 7899999999999999999999887654322211111100 000 0 00000000 0
Q ss_pred HhhcCCHHHHHHHHHHcCCeEEEEeeec
Q 027517 184 IREFLTGKDLEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 184 ~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 211 (222)
....++.+++.+++ +||++++.....
T Consensus 195 ~~~~~~~~~~~~~~--aGf~~~~~~~~~ 220 (245)
T 3ggd_A 195 RPGIFTAEDIELYF--PDFEILSQGEGL 220 (245)
T ss_dssp CCCCCCHHHHHHHC--TTEEEEEEECCB
T ss_pred CCCccCHHHHHHHh--CCCEEEeccccc
Confidence 11246899999999 999999866543
No 93
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.82 E-value=9.8e-20 Score=138.31 Aligned_cols=145 Identities=14% Similarity=0.066 Sum_probs=111.5
Q ss_pred HhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCce
Q 027517 28 SWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFF 107 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 107 (222)
+.+...++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++....+ .++.+.++|+.+.+. .++|
T Consensus 114 ~~~~~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~-~~~f 185 (286)
T 3m70_A 114 DAAKIISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKEN----LNISTALYDINAANI-QENY 185 (286)
T ss_dssp HHHHHSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCGGGCCC-CSCE
T ss_pred HHhhccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcC----CceEEEEeccccccc-cCCc
Confidence 3333347789999999999999999876 4599999999999999999876543 389999999998766 5789
Q ss_pred eEEEEcccccCcc--cHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHh
Q 027517 108 DAITMGYGLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIR 185 (222)
Q Consensus 108 D~v~~~~~l~~~~--~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (222)
|+|+++.+++|++ +...+++++.++|+|||.+++............ ....
T Consensus 186 D~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~----------------------------~~~~ 237 (286)
T 3m70_A 186 DFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCP----------------------------LPFS 237 (286)
T ss_dssp EEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCS----------------------------SCCS
T ss_pred cEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCC----------------------------CCcc
Confidence 9999999999984 466999999999999999887665443211100 0001
Q ss_pred hcCCHHHHHHHHHHcCCeEEEEeee
Q 027517 186 EFLTGKDLEKLALEIGFSRAKHYEL 210 (222)
Q Consensus 186 ~~~~~~~~~~~l~~~Gf~~~~~~~~ 210 (222)
..++..++.++++. |+++...+.
T Consensus 238 ~~~~~~~l~~~~~~--~~~~~~~~~ 260 (286)
T 3m70_A 238 FTFAENELKEYYKD--WEFLEYNEN 260 (286)
T ss_dssp CCBCTTHHHHHTTT--SEEEEEECC
T ss_pred ccCCHHHHHHHhcC--CEEEEEEcc
Confidence 24677888888854 988876533
No 94
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.82 E-value=9.9e-20 Score=132.73 Aligned_cols=115 Identities=19% Similarity=0.308 Sum_probs=97.3
Q ss_pred HHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC
Q 027517 22 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP 101 (222)
Q Consensus 22 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 101 (222)
+...+...+...++.+|||+|||+|.++..+++. +.+++++|+++.+++.++++.... +++.+.++|+.+++
T Consensus 39 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~ 110 (216)
T 3ofk_A 39 HTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKRW-----SHISWAATDILQFS 110 (216)
T ss_dssp HHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTTC-----SSEEEEECCTTTCC
T ss_pred HHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcccC-----CCeEEEEcchhhCC
Confidence 3344445566677789999999999999999876 358999999999999999887542 48999999999877
Q ss_pred CCCCceeEEEEcccccCcccH---HHHHHHHhcccCCCcEEEEEecC
Q 027517 102 FSDCFFDAITMGYGLRNVVDK---RKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 102 ~~~~~~D~v~~~~~l~~~~~~---~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
+.++||+|+++.+++|++++ ..+++++.++|+|||.+++.++.
T Consensus 111 -~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 111 -TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp -CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred -CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 56789999999999999876 57799999999999999987654
No 95
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.81 E-value=1.6e-19 Score=137.73 Aligned_cols=110 Identities=10% Similarity=0.169 Sum_probs=84.2
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhc---CCCeeEEeCCC------CCc--CC
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKAC---YKNIEWVEGDA------LDL--PF 102 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~d~------~~~--~~ 102 (222)
++.+|||+|||+|..+..+++. ...+|+|+|+|+.+++.|+++....+... ..++.+.+.|+ .++ ++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 5789999999999877766654 34689999999999999999865432100 00256778777 222 24
Q ss_pred CCCceeEEEEcccccCc---ccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 103 SDCFFDAITMGYGLRNV---VDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~~---~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
++++||+|+|.+++|+. ++...++++++++|||||.+++.++.
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 55789999999999875 45689999999999999999988765
No 96
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.81 E-value=7.1e-20 Score=137.24 Aligned_cols=101 Identities=32% Similarity=0.324 Sum_probs=87.4
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEEc
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMG 113 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~ 113 (222)
++.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++.. . .+.+.|+.++++++++||+|++.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~--------~-~~~~~d~~~~~~~~~~fD~v~~~ 121 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV--------K-NVVEAKAEDLPFPSGAFEAVLAL 121 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC--------S-CEEECCTTSCCSCTTCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC--------C-CEEECcHHHCCCCCCCEEEEEEc
Confidence 6789999999999999999865 4689999999999999998752 1 27889999888777889999998
Q ss_pred ccccCc-ccHHHHHHHHhcccCCCcEEEEEecCC
Q 027517 114 YGLRNV-VDKRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 114 ~~l~~~-~~~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
.++.|+ +++..++++++++|+|||.+++..++.
T Consensus 122 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 122 GDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp SSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred chhhhccccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 876666 789999999999999999999987653
No 97
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.80 E-value=1.5e-18 Score=121.87 Aligned_cols=128 Identities=14% Similarity=0.084 Sum_probs=103.3
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
.++.+|||+|||+|.++..+++. . +++++|+|+.+++. . .++.+.++|+.+ +.++++||+|++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~---~-~v~gvD~s~~~~~~---~---------~~~~~~~~d~~~-~~~~~~fD~i~~ 84 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR---N-TVVSTDLNIRALES---H---------RGGNLVRADLLC-SINQESVDVVVF 84 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT---S-EEEEEESCHHHHHT---C---------SSSCEEECSTTT-TBCGGGCSEEEE
T ss_pred CCCCeEEEeccCccHHHHHHHhc---C-cEEEEECCHHHHhc---c---------cCCeEEECChhh-hcccCCCCEEEE
Confidence 45679999999999999999866 3 99999999999987 1 578999999987 455578999999
Q ss_pred cccccCcccH---------HHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHh
Q 027517 113 GYGLRNVVDK---------RKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSS 183 (222)
Q Consensus 113 ~~~l~~~~~~---------~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (222)
+..+++.++. ...++++.+.+ |||.+++.+...
T Consensus 85 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~------------------------------------- 126 (170)
T 3q87_B 85 NPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA------------------------------------- 126 (170)
T ss_dssp CCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG-------------------------------------
T ss_pred CCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC-------------------------------------
Confidence 9988865443 56788888888 999998875331
Q ss_pred HhhcCCHHHHHHHHHHcCCeEEEEeeecCCeeeeEe
Q 027517 184 IREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLV 219 (222)
Q Consensus 184 ~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~ 219 (222)
.+.+++.++++++||+.+.......+.-.++.
T Consensus 127 ----~~~~~l~~~l~~~gf~~~~~~~~~~~~e~~~~ 158 (170)
T 3q87_B 127 ----NRPKEVLARLEERGYGTRILKVRKILGETVYI 158 (170)
T ss_dssp ----GCHHHHHHHHHHTTCEEEEEEEEECSSSEEEE
T ss_pred ----CCHHHHHHHHHHCCCcEEEEEeeccCCceEEE
Confidence 24568899999999999988877776555444
No 98
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.80 E-value=1.6e-18 Score=123.95 Aligned_cols=119 Identities=21% Similarity=0.266 Sum_probs=98.4
Q ss_pred HHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCC--eeEEeCCCC
Q 027517 21 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKN--IEWVEGDAL 98 (222)
Q Consensus 21 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~d~~ 98 (222)
...+.+++.+...++.+|||+|||+|..+..+++. +.+++++|+++.+++.++++....+. .+ +.+...|+.
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~---~~~~~~~~~~d~~ 112 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNL---DNYDIRVVHSDLY 112 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTC---TTSCEEEEECSTT
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCC---CccceEEEECchh
Confidence 44566777777778889999999999999998876 56999999999999999988764432 34 999999988
Q ss_pred CcCCCCCceeEEEEcccccC-cccHHHHHHHHhcccCCCcEEEEEecCC
Q 027517 99 DLPFSDCFFDAITMGYGLRN-VVDKRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 99 ~~~~~~~~~D~v~~~~~l~~-~~~~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
+. .+.++||+|+++.++++ ..+...+++++.++|+|||.+++.+...
T Consensus 113 ~~-~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 113 EN-VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp TT-CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred cc-cccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 73 34568999999998887 3567889999999999999999987653
No 99
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.80 E-value=3.9e-18 Score=123.15 Aligned_cols=115 Identities=17% Similarity=0.235 Sum_probs=93.0
Q ss_pred HHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc
Q 027517 21 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL 100 (222)
Q Consensus 21 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 100 (222)
..+..++..+...++.+|||+|||+|.++..+++. +.+|+++|+++++++.++++....+.. .++.++++|+.+.
T Consensus 42 ~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~--~~v~~~~~d~~~~ 116 (204)
T 3njr_A 42 PMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLS--PRMRAVQGTAPAA 116 (204)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEESCTTGG
T ss_pred HHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCC--CCEEEEeCchhhh
Confidence 44456677777888899999999999999999876 568999999999999999987654431 3799999999883
Q ss_pred CCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 101 PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 101 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
....++||+|++...+ +.. +++++.+.|+|||++++....
T Consensus 117 ~~~~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 117 LADLPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp GTTSCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECS
T ss_pred cccCCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecC
Confidence 3233579999987754 445 999999999999999886543
No 100
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.80 E-value=7e-20 Score=133.23 Aligned_cols=156 Identities=17% Similarity=0.204 Sum_probs=102.3
Q ss_pred hhHHHHHHHHhhCC-CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCC
Q 027517 19 HRIWKRMAVSWSGA-KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA 97 (222)
Q Consensus 19 ~~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~ 97 (222)
...+...+++.+.. .++.+|||+|||+|..+..+++.. ++.+++++|+++.+++.++++....+ .+++++++|+
T Consensus 14 ~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~d~ 88 (215)
T 4dzr_A 14 TEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFG----AVVDWAAADG 88 (215)
T ss_dssp HHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC-----------------------CCHHHH
T ss_pred HHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhC----CceEEEEcch
Confidence 34555666666655 678899999999999999999984 56799999999999999998875443 1678888888
Q ss_pred CCcCCCC-----CceeEEEEcccccCcccH--------------------------HHHHHHHhcccCCCcEEEEEecCC
Q 027517 98 LDLPFSD-----CFFDAITMGYGLRNVVDK--------------------------RKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 98 ~~~~~~~-----~~~D~v~~~~~l~~~~~~--------------------------~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
.+ +++. ++||+|+++..++...+. ..+++++.++|+|||++++.+...
T Consensus 89 ~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 167 (215)
T 4dzr_A 89 IE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH 167 (215)
T ss_dssp HH-HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT
T ss_pred Hh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC
Confidence 76 3333 789999998766543221 678899999999999954543321
Q ss_pred CCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcCCHHHHHHHHH--HcCCeEEEEeeecCCeeeeEeee
Q 027517 147 STQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLAL--EIGFSRAKHYELSGGLMGNLVAT 221 (222)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~Gf~~~~~~~~~~~~~~~~~~~ 221 (222)
...+++.++++ ++||..++......+...+++++
T Consensus 168 -----------------------------------------~~~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~~~ 203 (215)
T 4dzr_A 168 -----------------------------------------NQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVT 203 (215)
T ss_dssp -----------------------------------------SCHHHHHHHTGGGGGGTEECCEEECTTSCEEEEEEE
T ss_pred -----------------------------------------ccHHHHHHHHHHhhcCCceEEEEEecCCCEEEEEEE
Confidence 13457788888 99999888888777776666655
No 101
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.80 E-value=5e-18 Score=124.86 Aligned_cols=138 Identities=17% Similarity=0.203 Sum_probs=105.3
Q ss_pred CCCCCCeEEEecCC-CChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-CCCCCcee
Q 027517 31 GAKTGDNVLDVCCG-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-PFSDCFFD 108 (222)
Q Consensus 31 ~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D 108 (222)
...++.+|||+||| +|.++..+++.. +.+++++|+++.+++.++++....+ .+++++++|+..+ ++++++||
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~----~~v~~~~~d~~~~~~~~~~~fD 125 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNN----SNVRLVKSNGGIIKGVVEGTFD 125 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTT----CCCEEEECSSCSSTTTCCSCEE
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhC----CCcEEEeCCchhhhhcccCcee
Confidence 34678899999999 999999999885 5699999999999999999876544 2789999997543 34457899
Q ss_pred EEEEcccccCccc-------------------HHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccc
Q 027517 109 AITMGYGLRNVVD-------------------KRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVAS 169 (222)
Q Consensus 109 ~v~~~~~l~~~~~-------------------~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (222)
+|+++..+++.++ ...+++++.++|+|||++++......
T Consensus 126 ~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------------------- 183 (230)
T 3evz_A 126 VIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE---------------------- 183 (230)
T ss_dssp EEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH----------------------
T ss_pred EEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH----------------------
Confidence 9999877765433 47889999999999999988643321
Q ss_pred cCChhHHHHHhHHhHhhcCCHHHHHHHHHHcCCeEEEEeeecCCe
Q 027517 170 GYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELSGGL 214 (222)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~ 214 (222)
...+++.+.++++||++.......+..
T Consensus 184 ------------------~~~~~~~~~l~~~g~~~~~~~~~~g~~ 210 (230)
T 3evz_A 184 ------------------KLLNVIKERGIKLGYSVKDIKFKVGTR 210 (230)
T ss_dssp ------------------HHHHHHHHHHHHTTCEEEEEEECCCC-
T ss_pred ------------------hHHHHHHHHHHHcCCceEEEEecCCCe
Confidence 123578899999999877665444433
No 102
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.80 E-value=1.1e-18 Score=123.23 Aligned_cols=119 Identities=18% Similarity=0.187 Sum_probs=95.2
Q ss_pred hhHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCC
Q 027517 19 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 98 (222)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~ 98 (222)
.+.++..++..+...++.+|||+|||+|..+..+++.. ++.+++++|+++.+++.++++....+.. .++ ++..|..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~~-~~~~d~~ 85 (178)
T 3hm2_A 10 KQHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVS--DRI-AVQQGAP 85 (178)
T ss_dssp HHHHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCT--TSE-EEECCTT
T ss_pred HHHHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCC--CCE-EEecchH
Confidence 34556677777778888899999999999999999875 5679999999999999999887654321 367 8888875
Q ss_pred C-cCCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 99 D-LPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 99 ~-~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
+ ++...++||+|++..++++ ..+++++.+.|+|||.+++.+..
T Consensus 86 ~~~~~~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 86 RAFDDVPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp GGGGGCCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECS
T ss_pred hhhhccCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeec
Confidence 4 3332378999999999887 67899999999999999987543
No 103
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.80 E-value=1.3e-18 Score=128.92 Aligned_cols=102 Identities=15% Similarity=0.108 Sum_probs=86.7
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCC---CCceeE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS---DCFFDA 109 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~~D~ 109 (222)
.++.+|||+|||+|..+..++.. .++.+|+++|+|+.+++.++++....+. .++.++++|+.+++.+ .++||+
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~fD~ 144 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKIC-FPHLHVTIVDSLNKRITFLEKLSEALQL---ENTTFCHDRAETFGQRKDVRESYDI 144 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHH-CTTCEEEEEESCHHHHHHHHHHHHHHTC---SSEEEEESCHHHHTTCTTTTTCEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHcCC---CCEEEEeccHHHhcccccccCCccE
Confidence 46789999999999999999876 3567999999999999999998765543 4799999999887643 468999
Q ss_pred EEEcccccCcccHHHHHHHHhcccCCCcEEEEE
Q 027517 110 ITMGYGLRNVVDKRKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 110 v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~ 142 (222)
|++.. +.+...+++.+.++|+|||.+++.
T Consensus 145 V~~~~----~~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 145 VTARA----VARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp EEEEC----CSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEec----cCCHHHHHHHHHHhcCCCCEEEEE
Confidence 99976 366789999999999999999875
No 104
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.80 E-value=3.8e-19 Score=129.84 Aligned_cols=158 Identities=18% Similarity=0.140 Sum_probs=106.6
Q ss_pred HHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHH----hcchhhhhhhcCCCeeEEeCCCCCcC
Q 027517 26 AVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMA----SSRQDLVSKACYKNIEWVEGDALDLP 101 (222)
Q Consensus 26 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~d~~~~~ 101 (222)
.++.+...++.+|||+|||+|.++..+++.. ++.+|+++|+|+.+++.+ +++... ...+++.+.++|+.+++
T Consensus 19 ~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~---~~~~~v~~~~~d~~~l~ 94 (218)
T 3mq2_A 19 EFEQLRSQYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAK---GGLPNLLYLWATAERLP 94 (218)
T ss_dssp HHHHHHTTSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGG---TCCTTEEEEECCSTTCC
T ss_pred HHHHhhccCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhh---cCCCceEEEecchhhCC
Confidence 3444556778899999999999999999984 677999999999988853 332222 22258999999999988
Q ss_pred CCCCceeEEEEccc---c--cCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHH
Q 027517 102 FSDCFFDAITMGYG---L--RNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEE 176 (222)
Q Consensus 102 ~~~~~~D~v~~~~~---l--~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (222)
++.++ |.|++... + +|++++..++++++++|||||.+++........+..... ......
T Consensus 95 ~~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~------------~~~~~~--- 158 (218)
T 3mq2_A 95 PLSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEV------------GEHPEP--- 158 (218)
T ss_dssp SCCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGG------------TTCCCC---
T ss_pred CCCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEecccccccccccc------------ccCCcc---
Confidence 76665 77664332 2 255677899999999999999998853221100000000 000000
Q ss_pred HHHhHHhHhhcCCHHHHHHHHHHcCCeEEEEeeec
Q 027517 177 YQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 211 (222)
...+..+++..+++++||++.+.....
T Consensus 159 --------~~~~~~~~l~~~l~~aGf~i~~~~~~~ 185 (218)
T 3mq2_A 159 --------TPDSADEWLAPRYAEAGWKLADCRYLE 185 (218)
T ss_dssp --------CHHHHHHHHHHHHHHTTEEEEEEEEEC
T ss_pred --------chHHHHHHHHHHHHHcCCCceeeeccc
Confidence 001123568889999999998877654
No 105
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.80 E-value=5.1e-18 Score=123.92 Aligned_cols=160 Identities=15% Similarity=0.015 Sum_probs=106.5
Q ss_pred HHHHHHHhh---CCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCC
Q 027517 22 WKRMAVSWS---GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 98 (222)
Q Consensus 22 ~~~~~~~~~---~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~ 98 (222)
....++..+ ...++.+|||+|||+|.++.++++..++.++|+++|+++.+++...+..... .++.++++|+.
T Consensus 61 la~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-----~nv~~i~~Da~ 135 (232)
T 3id6_C 61 LAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-----PNIFPLLADAR 135 (232)
T ss_dssp HHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-----TTEEEEECCTT
T ss_pred HHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-----CCeEEEEcccc
Confidence 334444433 4778999999999999999999998877889999999998865443332211 58999999987
Q ss_pred CcC---CCCCceeEEEEcccccCcccHHHHH-HHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChh
Q 027517 99 DLP---FSDCFFDAITMGYGLRNVVDKRKAL-EESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLA 174 (222)
Q Consensus 99 ~~~---~~~~~~D~v~~~~~l~~~~~~~~~l-~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (222)
... ...++||+|++..+. ++...++ ..+.+.|||||++++......... ...+
T Consensus 136 ~~~~~~~~~~~~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisik~~~~d~------------t~~~-------- 192 (232)
T 3id6_C 136 FPQSYKSVVENVDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDV------------TKDP-------- 192 (232)
T ss_dssp CGGGTTTTCCCEEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC-------------------CCS--------
T ss_pred cchhhhccccceEEEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEEccCCccc------------CCCH--------
Confidence 642 123679999998654 4555544 556669999999998743221000 0000
Q ss_pred HHHHHhHHhHhhcCCHHHHHHHHHHcCCeEEEEeeecCC--eeeeEeee
Q 027517 175 EEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELSGG--LMGNLVAT 221 (222)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~--~~~~~~~~ 221 (222)
.-..++..+.|+++||++++....... ....++++
T Consensus 193 ------------~e~~~~~~~~L~~~gf~~~~~~~l~p~~~~h~~v~~~ 229 (232)
T 3id6_C 193 ------------KEIYKTEVEKLENSNFETIQIINLDPYDKDHAIVLSK 229 (232)
T ss_dssp ------------SSSTTHHHHHHHHTTEEEEEEEECTTTCSSCEEEEEE
T ss_pred ------------HHHHHHHHHHHHHCCCEEEEEeccCCCcCceEEEEEE
Confidence 001134557788899999998877432 34455554
No 106
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.80 E-value=1.8e-18 Score=125.07 Aligned_cols=128 Identities=17% Similarity=0.100 Sum_probs=104.2
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEE
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 111 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~ 111 (222)
..++.+|||+|||+|..+..+++. +..+++++|+++.+++.++++....+. .++.+.+.|+.+.. .++||+|+
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~--~~~fD~i~ 130 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAALNGI---YDIALQKTSLLADV--DGKFDLIV 130 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTC---CCCEEEESSTTTTC--CSCEEEEE
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEeccccccC--CCCceEEE
Confidence 457789999999999999998864 345899999999999999998765442 35999999987743 47899999
Q ss_pred EcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcCCHH
Q 027517 112 MGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGK 191 (222)
Q Consensus 112 ~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (222)
++.++++ ...+++++.++|+|||.+++.++... +.+
T Consensus 131 ~~~~~~~---~~~~l~~~~~~L~~gG~l~~~~~~~~-----------------------------------------~~~ 166 (205)
T 3grz_A 131 ANILAEI---LLDLIPQLDSHLNEDGQVIFSGIDYL-----------------------------------------QLP 166 (205)
T ss_dssp EESCHHH---HHHHGGGSGGGEEEEEEEEEEEEEGG-----------------------------------------GHH
T ss_pred ECCcHHH---HHHHHHHHHHhcCCCCEEEEEecCcc-----------------------------------------cHH
Confidence 9887765 47789999999999999998654421 346
Q ss_pred HHHHHHHHcCCeEEEEeee
Q 027517 192 DLEKLALEIGFSRAKHYEL 210 (222)
Q Consensus 192 ~~~~~l~~~Gf~~~~~~~~ 210 (222)
++.++++++||++++....
T Consensus 167 ~~~~~~~~~Gf~~~~~~~~ 185 (205)
T 3grz_A 167 KIEQALAENSFQIDLKMRA 185 (205)
T ss_dssp HHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHcCCceEEeecc
Confidence 7889999999999887754
No 107
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.79 E-value=9.4e-19 Score=129.81 Aligned_cols=163 Identities=17% Similarity=0.140 Sum_probs=114.7
Q ss_pred hHHHHHHHHhhC-CCCCCeEEEecCCC--ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCC
Q 027517 20 RIWKRMAVSWSG-AKTGDNVLDVCCGS--GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGD 96 (222)
Q Consensus 20 ~~~~~~~~~~~~-~~~~~~vLdiG~G~--G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d 96 (222)
+.|...++..+. .....+|||||||+ +..+..+++...++.+|+++|.|+.|++.+++++.... ..++.+++.|
T Consensus 63 r~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~---~~~~~~v~aD 139 (277)
T 3giw_A 63 RDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP---EGRTAYVEAD 139 (277)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS---SSEEEEEECC
T ss_pred HHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC---CCcEEEEEec
Confidence 444455555554 23456999999997 55666666655678899999999999999998875432 1368999999
Q ss_pred CCCcC----CC--CCcee-----EEEEcccccCccc---HHHHHHHHhcccCCCcEEEEEecCCCCCch-hhHHHHHHhh
Q 027517 97 ALDLP----FS--DCFFD-----AITMGYGLRNVVD---KRKALEESFRVLKPGSRISVLDFNKSTQPF-TTAIQEWMID 161 (222)
Q Consensus 97 ~~~~~----~~--~~~~D-----~v~~~~~l~~~~~---~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~-~~~~~~~~~~ 161 (222)
+.+.+ .+ .+.|| .|+++.+|||+++ +..+++++++.|+|||+|++.+...+..+. .......+..
T Consensus 140 ~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~ 219 (277)
T 3giw_A 140 MLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAA 219 (277)
T ss_dssp TTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHh
Confidence 98752 01 13344 6889999999987 568999999999999999999887654321 2222222211
Q ss_pred cccccccccCChhHHHHHhHHhHhhcCCHHHHHHHHHHcCCeEEE
Q 027517 162 NVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAK 206 (222)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 206 (222)
.. . ...++|.+++.++|. ||++++
T Consensus 220 ~g------------------~-p~~~rs~~ei~~~f~--Glelve 243 (277)
T 3giw_A 220 RN------------------M-PMRLRTHAEAEEFFE--GLELVE 243 (277)
T ss_dssp TT------------------C-CCCCCCHHHHHHTTT--TSEECT
T ss_pred cC------------------C-CCccCCHHHHHHHhC--CCcccC
Confidence 10 0 124679999999994 999764
No 108
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.79 E-value=2.8e-18 Score=128.67 Aligned_cols=108 Identities=14% Similarity=0.182 Sum_probs=91.0
Q ss_pred HhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCce
Q 027517 28 SWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFF 107 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 107 (222)
.+....++.+|||+|||+|.++..++.+. ++++|+++|+++++++.|+++....+. .+++++++|+.+++ +++|
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~gl---~~v~~v~gDa~~l~--d~~F 189 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGLGV---DGVNVITGDETVID--GLEF 189 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHHTC---CSEEEEESCGGGGG--GCCC
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhcCC---CCeEEEECchhhCC--CCCc
Confidence 45677899999999999998876555443 577999999999999999999865543 58999999998875 5789
Q ss_pred eEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 108 DAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 108 D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
|+|++... .++...+++++.+.|||||++++.+.
T Consensus 190 DvV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 190 DVLMVAAL---AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp SEEEECTT---CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CEEEECCC---ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 99998654 57889999999999999999998764
No 109
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.79 E-value=1.3e-18 Score=127.37 Aligned_cols=155 Identities=15% Similarity=0.209 Sum_probs=100.3
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCC-hhHHHHH---hcchhhhhhhcCCCeeEEeCCCCCcCCC-CCce
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFS-KNQLSMA---SSRQDLVSKACYKNIEWVEGDALDLPFS-DCFF 107 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~-~~~~~~~---~~~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~~ 107 (222)
.++.+|||||||+|..+..+++. .++.+|+|+|+| +.+++.| +++....+. +++.+.++|+.+++.. .+.+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~-~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~---~~v~~~~~d~~~l~~~~~d~v 98 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAIN-DQNTFYIGIDPVKENLFDISKKIIKKPSKGGL---SNVVFVIAAAESLPFELKNIA 98 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHT-CTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC---SSEEEECCBTTBCCGGGTTCE
T ss_pred CCCCEEEEEeccCcHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC---CCeEEEEcCHHHhhhhccCeE
Confidence 56789999999999999999876 367789999999 6666665 776644332 5899999999987532 2456
Q ss_pred eEEEEcccccCc-----ccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHH
Q 027517 108 DAITMGYGLRNV-----VDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKS 182 (222)
Q Consensus 108 D~v~~~~~l~~~-----~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (222)
|.|.+++...+. .+...++++++++|||||.+++.................. +.
T Consensus 99 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~------~~--------------- 157 (225)
T 3p2e_A 99 DSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGL------PL--------------- 157 (225)
T ss_dssp EEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC-----------------------------------
T ss_pred EEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCC------CC---------------
Confidence 666665543221 2235789999999999999988443322210000000000 00
Q ss_pred hHhhcCCHHHHHHHHHHcCCeEEEEeeecC
Q 027517 183 SIREFLTGKDLEKLALEIGFSRAKHYELSG 212 (222)
Q Consensus 183 ~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 212 (222)
....++..+++.++++++||++.....+..
T Consensus 158 ~~~~~~~~~el~~~l~~aGf~v~~~~~~~~ 187 (225)
T 3p2e_A 158 LSKAYFLSEQYKAELSNSGFRIDDVKELDN 187 (225)
T ss_dssp CCHHHHHSHHHHHHHHHHTCEEEEEEEECH
T ss_pred CChhhcchHHHHHHHHHcCCCeeeeeecCH
Confidence 000111234699999999999988776653
No 110
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.78 E-value=7.6e-18 Score=122.08 Aligned_cols=105 Identities=15% Similarity=0.061 Sum_probs=80.7
Q ss_pred hCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc----CCCCC
Q 027517 30 SGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL----PFSDC 105 (222)
Q Consensus 30 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~----~~~~~ 105 (222)
+...++.+|||+|||+|..+..+++..+ .++|+++|+|+.+++...+..... .++.++.+|+... +++ +
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~-----~~v~~~~~d~~~~~~~~~~~-~ 125 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER-----NNIIPLLFDASKPWKYSGIV-E 125 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC-----SSEEEECSCTTCGGGTTTTC-C
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC-----CCeEEEEcCCCCchhhcccc-c
Confidence 3456788999999999999999998864 569999999999876655443221 4788888998763 333 7
Q ss_pred ceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEe
Q 027517 106 FFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 106 ~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
+||+|+++.. +..+...++++++++|||||++++..
T Consensus 126 ~fD~V~~~~~--~~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 126 KVDLIYQDIA--QKNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp CEEEEEECCC--STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceeEEEEecc--ChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 8999999732 22334456899999999999998873
No 111
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.78 E-value=2.5e-20 Score=137.60 Aligned_cols=104 Identities=17% Similarity=0.175 Sum_probs=86.4
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc--CCCCCceeEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL--PFSDCFFDAI 110 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~D~v 110 (222)
.++.+|||||||+|..+..+++.. ..+++++|+++.+++.++++....+ .++.++.+|+.+. ++++++||.|
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~--~~~v~~id~~~~~~~~a~~~~~~~~----~~~~~~~~~a~~~~~~~~~~~FD~i 132 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQT----HKVIPLKGLWEDVAPTLPDGHFDGI 132 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSC--EEEEEEEECCHHHHHHHHHHGGGCS----SEEEEEESCHHHHGGGSCTTCEEEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhC--CcEEEEEeCCHHHHHHHHHHHhhCC----CceEEEeehHHhhcccccccCCceE
Confidence 567899999999999999988752 3489999999999999999875543 5788888988653 4567789999
Q ss_pred EE-----cccccCcccHHHHHHHHhcccCCCcEEEEE
Q 027517 111 TM-----GYGLRNVVDKRKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 111 ~~-----~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~ 142 (222)
++ ...++|.++...++++++++|||||++++.
T Consensus 133 ~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 133 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp EECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred EEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 74 555677888999999999999999999874
No 112
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.78 E-value=9e-18 Score=122.20 Aligned_cols=107 Identities=22% Similarity=0.223 Sum_probs=89.0
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC--CCCCceeEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP--FSDCFFDAI 110 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~D~v 110 (222)
.++.+|||+|||+|.++..+++.. ++.+++++|+++.+++.++++....+. .++.++++|+.+++ +++++||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~D~i 115 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEVGV---PNIKLLWVDGSDLTDYFEDGEIDRL 115 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHCC---SSEEEEECCSSCGGGTSCTTCCSEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHcCC---CCEEEEeCCHHHHHhhcCCCCCCEE
Confidence 457799999999999999999884 677999999999999999998765432 58999999998866 566789999
Q ss_pred EEcccccCcc--------cHHHHHHHHhcccCCCcEEEEEe
Q 027517 111 TMGYGLRNVV--------DKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 111 ~~~~~l~~~~--------~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
++++...+.. ....+++.+.++|+|||.+++..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 116 YLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 9987654332 12679999999999999998864
No 113
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.78 E-value=1e-19 Score=134.48 Aligned_cols=108 Identities=19% Similarity=0.239 Sum_probs=86.6
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc--CCCCCceeE
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL--PFSDCFFDA 109 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~D~ 109 (222)
..++.+|||+|||+|..+..+++. ...+++++|+|+.+++.++++....+ .++.++++|+.++ ++++++||+
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~fD~ 131 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEA--PIDEHWIIECNDGVFQRLRDWAPRQT----HKVIPLKGLWEDVAPTLPDGHFDG 131 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTS--CEEEEEEEECCHHHHHHHHHHGGGCS----SEEEEEESCHHHHGGGSCTTCEEE
T ss_pred CCCCCeEEEEeccCCHHHHHHHhc--CCCeEEEEcCCHHHHHHHHHHHHhcC----CCeEEEecCHHHhhcccCCCceEE
Confidence 356789999999999999999754 22389999999999999999875433 5799999999887 777789999
Q ss_pred EEE-ccccc----CcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 110 ITM-GYGLR----NVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 110 v~~-~~~l~----~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
|++ .+.++ +..+...++++++++|||||++++.+..
T Consensus 132 V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 132 ILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp EEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred EEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 999 55541 2233457899999999999999886543
No 114
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.78 E-value=3.1e-18 Score=142.53 Aligned_cols=125 Identities=19% Similarity=0.175 Sum_probs=101.2
Q ss_pred HHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhh---hcCCCeeEEeCCC
Q 027517 21 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK---ACYKNIEWVEGDA 97 (222)
Q Consensus 21 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~d~ 97 (222)
.+...+.+.+...++.+|||+|||+|.++..+++..++..+|+|+|+++.+++.|++++..... ....++.++++|+
T Consensus 708 qRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa 787 (950)
T 3htx_A 708 QRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI 787 (950)
T ss_dssp HHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT
T ss_pred HHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECch
Confidence 3445566666666788999999999999999998743446999999999999999986543211 1225799999999
Q ss_pred CCcCCCCCceeEEEEcccccCcccHH--HHHHHHhcccCCCcEEEEEecCC
Q 027517 98 LDLPFSDCFFDAITMGYGLRNVVDKR--KALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 98 ~~~~~~~~~~D~v~~~~~l~~~~~~~--~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
.++++..++||+|++..+++|+++.. .+++++.++|||| .+++.+++.
T Consensus 788 ~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 788 LEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp TSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred HhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 99888778999999999999998754 5899999999999 877777654
No 115
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.78 E-value=2.4e-18 Score=122.41 Aligned_cols=109 Identities=20% Similarity=0.273 Sum_probs=85.4
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-CCCCceeEE
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-FSDCFFDAI 110 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~v 110 (222)
..++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.++++....+. .++.+++.+...++ ..+++||+|
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~---~~v~~~~~~~~~l~~~~~~~fD~v 93 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGI---ENTELILDGHENLDHYVREPIRAA 93 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTC---CCEEEEESCGGGGGGTCCSCEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEeCcHHHHHhhccCCcCEE
Confidence 457889999999999999999976 56999999999999999998865443 58999998877643 345789999
Q ss_pred EEccc-ccC-------c-ccHHHHHHHHhcccCCCcEEEEEecCC
Q 027517 111 TMGYG-LRN-------V-VDKRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 111 ~~~~~-l~~-------~-~~~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
+++.. +++ . .+...+++++.++|||||.+++..+..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 94 IFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp EEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred EEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence 98733 222 1 345678899999999999999887653
No 116
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.78 E-value=4.9e-18 Score=123.45 Aligned_cols=107 Identities=25% Similarity=0.379 Sum_probs=91.5
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
.++.+|||+|||+|..+..+++. +.. +++++|+++.+++.++++.... +++.+.+.|+.++++++++||+|++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~-~~~-~v~~~D~s~~~~~~a~~~~~~~-----~~i~~~~~d~~~~~~~~~~fD~v~~ 113 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLG-GFP-NVTSVDYSSVVVAAMQACYAHV-----PQLRWETMDVRKLDFPSASFDVVLE 113 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHT-TCC-CEEEEESCHHHHHHHHHHTTTC-----TTCEEEECCTTSCCSCSSCEEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHc-CCC-cEEEEeCCHHHHHHHHHhcccC-----CCcEEEEcchhcCCCCCCcccEEEE
Confidence 56789999999999999999877 232 8999999999999999886531 5899999999988777788999999
Q ss_pred cccccCcc---------------cHHHHHHHHhcccCCCcEEEEEecCC
Q 027517 113 GYGLRNVV---------------DKRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 113 ~~~l~~~~---------------~~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
..+++++. +...+++++.++|+|||.+++.++..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 114 KGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp ESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 88886553 56889999999999999999987664
No 117
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.78 E-value=1.6e-18 Score=130.87 Aligned_cols=111 Identities=21% Similarity=0.319 Sum_probs=90.8
Q ss_pred HHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhh-hhhcCCCeeEEeCCCCCcCCC
Q 027517 25 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLV-SKACYKNIEWVEGDALDLPFS 103 (222)
Q Consensus 25 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~d~~~~~~~ 103 (222)
.+...+...++.+|||+|||+|..+..+++.+.++.+++++|+++.+++.++++.... + ..++.+.++|+.+ +++
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g---~~~v~~~~~d~~~-~~~ 176 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD---IGNVRTSRSDIAD-FIS 176 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC---CTTEEEECSCTTT-CCC
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC---CCcEEEEECchhc-cCc
Confidence 4555566778899999999999999999987556779999999999999999987544 3 2589999999987 455
Q ss_pred CCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 104 DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
+++||+|++ +.+++..+++++.+.|+|||++++.+.
T Consensus 177 ~~~fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 177 DQMYDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp SCCEEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred CCCccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 578999998 566778899999999999999998763
No 118
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.78 E-value=2.5e-18 Score=123.52 Aligned_cols=114 Identities=22% Similarity=0.439 Sum_probs=92.7
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-CCCCceeE
Q 027517 31 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-FSDCFFDA 109 (222)
Q Consensus 31 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~ 109 (222)
...++.+|||+|||+|..+..+++.+++..+++++|+++.+++.++++....+.. .++.++++|+.+++ ..+++||+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~fD~ 96 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLI--DRVTLIKDGHQNMDKYIDCPVKA 96 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCG--GGEEEECSCGGGGGGTCCSCEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CCeEEEECCHHHHhhhccCCceE
Confidence 4467889999999999999999998766679999999999999999987654321 47999999998765 45578999
Q ss_pred EEEcccccC---------cccHHHHHHHHhcccCCCcEEEEEecCC
Q 027517 110 ITMGYGLRN---------VVDKRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 110 v~~~~~l~~---------~~~~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
|+++..+.. ..+...+++++.++|+|||++++..+..
T Consensus 97 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 97 VMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp EEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred EEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 998876511 1234679999999999999999887654
No 119
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.78 E-value=4.4e-18 Score=123.15 Aligned_cols=113 Identities=19% Similarity=0.170 Sum_probs=89.8
Q ss_pred HHHHHHHHhhCCC---CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCC
Q 027517 21 IWKRMAVSWSGAK---TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA 97 (222)
Q Consensus 21 ~~~~~~~~~~~~~---~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~ 97 (222)
.+.+.+.+.+... ++.+|||+|||+|..+..+++.. ++.+++++|+++.+++.++++....+. .++.+.++|+
T Consensus 49 ~~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~ 124 (207)
T 1jsx_A 49 MLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKL---ENIEPVQSRV 124 (207)
T ss_dssp HHHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTC---SSEEEEECCT
T ss_pred HHHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCC---CCeEEEecch
Confidence 3444444444322 47799999999999999999885 567999999999999999988765432 3599999999
Q ss_pred CCcCCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEE
Q 027517 98 LDLPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 98 ~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~ 142 (222)
.+.+ +.++||+|+++. +.+...+++.+.++|+|||.+++.
T Consensus 125 ~~~~-~~~~~D~i~~~~----~~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 125 EEFP-SEPPFDGVISRA----FASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp TTSC-CCSCEEEEECSC----SSSHHHHHHHHTTSEEEEEEEEEE
T ss_pred hhCC-ccCCcCEEEEec----cCCHHHHHHHHHHhcCCCcEEEEE
Confidence 8865 346899999754 356788999999999999999886
No 120
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.77 E-value=1.8e-18 Score=132.96 Aligned_cols=112 Identities=18% Similarity=0.226 Sum_probs=89.9
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhh----hcCCCeeEEeCCCCCcC----CC-
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK----ACYKNIEWVEGDALDLP----FS- 103 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~d~~~~~----~~- 103 (222)
.++.+|||+|||+|..+..+++. +..+++++|+|+.+++.++++...... ....++.+++.|+.+.+ ++
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 110 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRD 110 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSS
T ss_pred CCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhccc
Confidence 36779999999999999998874 456999999999999999988654310 01137899999998865 43
Q ss_pred -CCceeEEEEcccccCc----ccHHHHHHHHhcccCCCcEEEEEecCC
Q 027517 104 -DCFFDAITMGYGLRNV----VDKRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 104 -~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
.++||+|+++.++|+. ++...+++++.++|+|||.+++..+..
T Consensus 111 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 111 PQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp TTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 3489999999999887 345789999999999999999987653
No 121
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.77 E-value=5.8e-18 Score=126.45 Aligned_cols=113 Identities=19% Similarity=0.362 Sum_probs=95.2
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCC
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 103 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 103 (222)
..+...+...++.+|||+|||+|.++..+++.+++..+++++|+++++++.++++....+.. .++++.+.|+.+. ++
T Consensus 83 ~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~-~~ 159 (255)
T 3mb5_A 83 ALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFD--DRVTIKLKDIYEG-IE 159 (255)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCT--TTEEEECSCGGGC-CC
T ss_pred HHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCC--CceEEEECchhhc-cC
Confidence 45666777888999999999999999999998767789999999999999999987655432 3599999999864 55
Q ss_pred CCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 104 DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
.++||+|++ +.+++..+++++.+.|+|||.+++..+
T Consensus 160 ~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 160 EENVDHVIL-----DLPQPERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp CCSEEEEEE-----CSSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCcCEEEE-----CCCCHHHHHHHHHHHcCCCCEEEEEEC
Confidence 678999998 456777889999999999999988653
No 122
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.77 E-value=9.3e-18 Score=125.47 Aligned_cols=113 Identities=21% Similarity=0.341 Sum_probs=95.9
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhh-hhhcCCCeeEEeCCCCCcCC
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLV-SKACYKNIEWVEGDALDLPF 102 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~d~~~~~~ 102 (222)
..++..+...++.+|||+|||+|.++..+++.+++..+++++|+++.+++.++++.... + ..++.+...|+.+.++
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g---~~~v~~~~~d~~~~~~ 162 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ---VENVRFHLGKLEEAEL 162 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC---CCCEEEEESCGGGCCC
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC---CCCEEEEECchhhcCC
Confidence 45666677788999999999999999999998766779999999999999999987554 3 2589999999988766
Q ss_pred CCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 103 SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
++++||+|++ +.+++..+++++.++|+|||.+++.++
T Consensus 163 ~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 163 EEAAYDGVAL-----DLMEPWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp CTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCCcCEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 6678999998 355667889999999999999998764
No 123
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.77 E-value=3.3e-17 Score=120.26 Aligned_cols=104 Identities=24% Similarity=0.218 Sum_probs=84.1
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC---CCCCce
Q 027517 31 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---FSDCFF 107 (222)
Q Consensus 31 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~~ 107 (222)
...++.+|||+|||+|.++..+++.+++..+++++|+++.+++.++++.... +++.++++|+.+.. ...++|
T Consensus 70 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-----~~v~~~~~d~~~~~~~~~~~~~~ 144 (227)
T 1g8a_A 70 PIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-----RNIVPILGDATKPEEYRALVPKV 144 (227)
T ss_dssp CCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-----TTEEEEECCTTCGGGGTTTCCCE
T ss_pred CCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-----CCCEEEEccCCCcchhhcccCCc
Confidence 3567889999999999999999988766679999999999999888776433 48999999998732 123579
Q ss_pred eEEEEcccccCcccH-HHHHHHHhcccCCCcEEEEE
Q 027517 108 DAITMGYGLRNVVDK-RKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 108 D~v~~~~~l~~~~~~-~~~l~~~~~~l~~gG~l~i~ 142 (222)
|+|++... .++. ..+++++.++|||||.+++.
T Consensus 145 D~v~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 145 DVIFEDVA---QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EEEEECCC---STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCC---CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 99998665 2333 34599999999999999887
No 124
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.77 E-value=3.7e-18 Score=125.83 Aligned_cols=108 Identities=21% Similarity=0.148 Sum_probs=84.7
Q ss_pred hhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc---CCCCC
Q 027517 29 WSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL---PFSDC 105 (222)
Q Consensus 29 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~---~~~~~ 105 (222)
.+...++.+|||+|||+|.++..+++.+++..+++++|+++.+++.+.+..... .++.++++|+.+. +...+
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-----~~v~~~~~d~~~~~~~~~~~~ 146 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-----TNIIPVIEDARHPHKYRMLIA 146 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-----TTEEEECSCTTCGGGGGGGCC
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-----CCeEEEEcccCChhhhcccCC
Confidence 345667889999999999999999998756679999999998877766655332 4899999999873 33457
Q ss_pred ceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEe
Q 027517 106 FFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 106 ~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
+||+|++... .......++.++.+.|||||.+++..
T Consensus 147 ~~D~V~~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 147 MVDVIFADVA--QPDQTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp CEEEEEECCC--CTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEEEEcCC--CccHHHHHHHHHHHHcCCCeEEEEEE
Confidence 8999999655 22233556888999999999998853
No 125
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.77 E-value=7.5e-18 Score=128.73 Aligned_cols=153 Identities=15% Similarity=0.160 Sum_probs=110.3
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhh-hhcCCCeeEEeCCCCCcCC--CCCcee
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVS-KACYKNIEWVEGDALDLPF--SDCFFD 108 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~d~~~~~~--~~~~~D 108 (222)
.+++.+|||+|||+|..+..+++. .+..+++++|+++.+++.+++++.... ....++++++.+|+.+... +.++||
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD 171 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRH-GTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYD 171 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEE
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCcee
Confidence 356689999999999999999976 345699999999999999998863211 1112689999999887542 357899
Q ss_pred EEEEcccccCcccH----HHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhH
Q 027517 109 AITMGYGLRNVVDK----RKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSI 184 (222)
Q Consensus 109 ~v~~~~~l~~~~~~----~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (222)
+|++....+..+.. ..++++++++|+|||.+++....... .
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~----~------------------------------- 216 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWL----D------------------------------- 216 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTT----C-------------------------------
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCccc----c-------------------------------
Confidence 99997765543332 68899999999999999886432100 0
Q ss_pred hhcCCHHHHHHHHHHcCCeEEEEeee-----cCCeeeeEeeeC
Q 027517 185 REFLTGKDLEKLALEIGFSRAKHYEL-----SGGLMGNLVATR 222 (222)
Q Consensus 185 ~~~~~~~~~~~~l~~~Gf~~~~~~~~-----~~~~~~~~~~~k 222 (222)
.....++.+.++++||..+..... +.+.|...+|+|
T Consensus 217 --~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w~f~~as~ 257 (304)
T 3bwc_A 217 --LELIEKMSRFIRETGFASVQYALMHVPTYPCGSIGTLVCSK 257 (304)
T ss_dssp --HHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCCEEEEEES
T ss_pred --hHHHHHHHHHHHhCCCCcEEEEEeecccccCcceEEEEEeC
Confidence 012457888999999998876654 256777777764
No 126
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.76 E-value=1.6e-17 Score=124.40 Aligned_cols=139 Identities=16% Similarity=0.216 Sum_probs=106.6
Q ss_pred HHHhhCCC-CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC--C
Q 027517 26 AVSWSGAK-TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP--F 102 (222)
Q Consensus 26 ~~~~~~~~-~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~ 102 (222)
+..+.... ++.+|||+|||+|..+..+++.. + .+++++|+++.+++.++++....+.. .++.++++|+.+.+ +
T Consensus 40 l~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~-~-~~v~gvDi~~~~~~~a~~n~~~~~~~--~~v~~~~~D~~~~~~~~ 115 (259)
T 3lpm_A 40 LAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRT-K-AKIVGVEIQERLADMAKRSVAYNQLE--DQIEIIEYDLKKITDLI 115 (259)
T ss_dssp HHHHCCCCSSCCEEEETTCTTTHHHHHHHTTC-C-CEEEEECCSHHHHHHHHHHHHHTTCT--TTEEEECSCGGGGGGTS
T ss_pred HHHHhcCCCCCCEEEEcCCchhHHHHHHHHhc-C-CcEEEEECCHHHHHHHHHHHHHCCCc--ccEEEEECcHHHhhhhh
Confidence 34455666 78899999999999999999873 3 39999999999999999988655432 47999999998865 4
Q ss_pred CCCceeEEEEcccccCc--------------------ccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhc
Q 027517 103 SDCFFDAITMGYGLRNV--------------------VDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDN 162 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~~--------------------~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~ 162 (222)
+.++||+|+++..+... .+...+++.+.++|+|||+++++...
T Consensus 116 ~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~----------------- 178 (259)
T 3lpm_A 116 PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP----------------- 178 (259)
T ss_dssp CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT-----------------
T ss_pred ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH-----------------
Confidence 46789999998665433 22457899999999999999885321
Q ss_pred ccccccccCChhHHHHHhHHhHhhcCCHHHHHHHHHHcCCeEEEEeee
Q 027517 163 VVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYEL 210 (222)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 210 (222)
....++...+++.||........
T Consensus 179 -------------------------~~~~~~~~~l~~~~~~~~~~~~v 201 (259)
T 3lpm_A 179 -------------------------ERLLDIIDIMRKYRLEPKRIQFV 201 (259)
T ss_dssp -------------------------TTHHHHHHHHHHTTEEEEEEEEE
T ss_pred -------------------------HHHHHHHHHHHHCCCceEEEEEe
Confidence 13456778888899988766544
No 127
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.76 E-value=1.2e-17 Score=121.35 Aligned_cols=107 Identities=16% Similarity=0.164 Sum_probs=87.8
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC--CCCCceeEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP--FSDCFFDAI 110 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~D~v 110 (222)
.++.+|||+|||+|.++..+++.. ++.+++|+|+|+.+++.++++....+. .++.++++|+.+++ +++++||.|
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~---~nv~~~~~d~~~l~~~~~~~~~d~v 112 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEA---QNVKLLNIDADTLTDVFEPGEVKRV 112 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCC---SSEEEECCCGGGHHHHCCTTSCCEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCC---CCEEEEeCCHHHHHhhcCcCCcCEE
Confidence 456799999999999999999884 677999999999999999988755432 58999999998864 566789999
Q ss_pred EEcccccCccc--------HHHHHHHHhcccCCCcEEEEEe
Q 027517 111 TMGYGLRNVVD--------KRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 111 ~~~~~l~~~~~--------~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
++++...+... ...+++++.++|+|||.+++..
T Consensus 113 ~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 113 YLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred EEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 98765443321 3678999999999999998864
No 128
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.76 E-value=7.1e-18 Score=120.39 Aligned_cols=122 Identities=14% Similarity=0.073 Sum_probs=96.7
Q ss_pred HHHHHHHHhhCC---CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCC
Q 027517 21 IWKRMAVSWSGA---KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA 97 (222)
Q Consensus 21 ~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~ 97 (222)
.....+...+.. .++.+|||+|||+|..+..+++. ...+++++|+++.+++.++++....+. .+++++++|+
T Consensus 28 ~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~v~~~~~d~ 102 (189)
T 3p9n_A 28 RVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSR--GAASVLFVESDQRSAAVIARNIEALGL---SGATLRRGAV 102 (189)
T ss_dssp HHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHHHTC---SCEEEEESCH
T ss_pred HHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHHcCC---CceEEEEccH
Confidence 333444444432 56789999999999999987764 345899999999999999998865543 4899999999
Q ss_pred CCcC--CCCCceeEEEEcccccCc-ccHHHHHHHHhc--ccCCCcEEEEEecCCC
Q 027517 98 LDLP--FSDCFFDAITMGYGLRNV-VDKRKALEESFR--VLKPGSRISVLDFNKS 147 (222)
Q Consensus 98 ~~~~--~~~~~~D~v~~~~~l~~~-~~~~~~l~~~~~--~l~~gG~l~i~~~~~~ 147 (222)
.+.. .+.++||+|+++.++++. ++...+++.+.+ +|+|||.+++......
T Consensus 103 ~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 103 AAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp HHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred HHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 8753 335789999999988875 678889999998 9999999999776543
No 129
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.76 E-value=1.8e-17 Score=123.60 Aligned_cols=137 Identities=21% Similarity=0.219 Sum_probs=107.3
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEE
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 111 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~ 111 (222)
..++.+|||+|||+|.++..+++. + .+++++|+++.+++.++++....+. .+.+..+|+.+. ++.++||+|+
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~-g--~~v~gvDi~~~~v~~a~~n~~~~~~----~v~~~~~d~~~~-~~~~~fD~Vv 189 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL-G--GKALGVDIDPMVLPQAEANAKRNGV----RPRFLEGSLEAA-LPFGPFDLLV 189 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-T--CEEEEEESCGGGHHHHHHHHHHTTC----CCEEEESCHHHH-GGGCCEEEEE
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh-C--CeEEEEECCHHHHHHHHHHHHHcCC----cEEEEECChhhc-CcCCCCCEEE
Confidence 457789999999999999988875 3 3999999999999999998765432 288888888763 3346799999
Q ss_pred EcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcCCHH
Q 027517 112 MGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGK 191 (222)
Q Consensus 112 ~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (222)
++...+ ....++..+.+.|+|||++++...... +.+
T Consensus 190 ~n~~~~---~~~~~l~~~~~~LkpgG~lils~~~~~-----------------------------------------~~~ 225 (254)
T 2nxc_A 190 ANLYAE---LHAALAPRYREALVPGGRALLTGILKD-----------------------------------------RAP 225 (254)
T ss_dssp EECCHH---HHHHHHHHHHHHEEEEEEEEEEEEEGG-----------------------------------------GHH
T ss_pred ECCcHH---HHHHHHHHHHHHcCCCCEEEEEeeccC-----------------------------------------CHH
Confidence 976544 346789999999999999998654321 246
Q ss_pred HHHHHHHHcCCeEEEEeeecCCeeeeEeeeC
Q 027517 192 DLEKLALEIGFSRAKHYELSGGLMGNLVATR 222 (222)
Q Consensus 192 ~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~k 222 (222)
++.+.++++||++++..... .|..++++|
T Consensus 226 ~v~~~l~~~Gf~~~~~~~~~--~W~~l~~~k 254 (254)
T 2nxc_A 226 LVREAMAGAGFRPLEEAAEG--EWVLLAYGR 254 (254)
T ss_dssp HHHHHHHHTTCEEEEEEEET--TEEEEEEEC
T ss_pred HHHHHHHHCCCEEEEEeccC--CeEEEEEEC
Confidence 88899999999999877543 466677765
No 130
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.76 E-value=2e-18 Score=126.73 Aligned_cols=119 Identities=16% Similarity=0.212 Sum_probs=97.5
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCC-CCcCCC-CCceeEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA-LDLPFS-DCFFDAI 110 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~-~~~~~~-~~~~D~v 110 (222)
.++.+|||+|||+|..+..+++. +.+++++|+++.+++.++++. +++.++++|+ ..++++ +++||+|
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~~~~fD~v 115 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARANA--------PHADVYEWNGKGELPAGLGAPFGLI 115 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHC--------TTSEEEECCSCSSCCTTCCCCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhC--------CCceEEEcchhhccCCcCCCCEEEE
Confidence 56789999999999999999876 469999999999999999873 5899999999 456666 7889999
Q ss_pred EEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcCCH
Q 027517 111 TMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTG 190 (222)
Q Consensus 111 ~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (222)
+++ .++..+++++.++|||||.++... ...+.
T Consensus 116 ~~~------~~~~~~l~~~~~~LkpgG~l~~~~------------------------------------------~~~~~ 147 (226)
T 3m33_A 116 VSR------RGPTSVILRLPELAAPDAHFLYVG------------------------------------------PRLNV 147 (226)
T ss_dssp EEE------SCCSGGGGGHHHHEEEEEEEEEEE------------------------------------------SSSCC
T ss_pred EeC------CCHHHHHHHHHHHcCCCcEEEEeC------------------------------------------CcCCH
Confidence 997 356778899999999999998110 12355
Q ss_pred HHHHHHHHHcCCeEEEEeee
Q 027517 191 KDLEKLALEIGFSRAKHYEL 210 (222)
Q Consensus 191 ~~~~~~l~~~Gf~~~~~~~~ 210 (222)
+++.+.++++||+++.....
T Consensus 148 ~~~~~~l~~~Gf~~~~~~~~ 167 (226)
T 3m33_A 148 PEVPERLAAVGWDIVAEDHV 167 (226)
T ss_dssp THHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHCCCeEEEEEee
Confidence 67889999999998776543
No 131
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.75 E-value=1.2e-17 Score=123.99 Aligned_cols=119 Identities=13% Similarity=0.053 Sum_probs=94.5
Q ss_pred chhhHHHHHHHHhh------CCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCe
Q 027517 17 GQHRIWKRMAVSWS------GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNI 90 (222)
Q Consensus 17 ~~~~~~~~~~~~~~------~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i 90 (222)
+....|.+.+.... ...++.+|||+|||+|..+..++... ++.+|+++|+++.+++.++++....+. .++
T Consensus 57 ~~~~~~~~~~~ds~~~l~~~~~~~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l---~~v 132 (249)
T 3g89_A 57 GEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGL---KGA 132 (249)
T ss_dssp CHHHHHHHHHHHHHGGGGSSCCCSSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTC---SSE
T ss_pred CHHHHhhceeeechhhhcccccCCCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCC---Cce
Confidence 44556655554432 12457899999999999999999875 677999999999999999998876543 469
Q ss_pred eEEeCCCCCcCCC---CCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEe
Q 027517 91 EWVEGDALDLPFS---DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 91 ~~~~~d~~~~~~~---~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
+++++|+++++.. .++||+|++..+ .+...+++.+.++|||||++++..
T Consensus 133 ~~~~~d~~~~~~~~~~~~~fD~I~s~a~----~~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 133 RALWGRAEVLAREAGHREAYARAVARAV----APLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp EEEECCHHHHTTSTTTTTCEEEEEEESS----CCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEEECcHHHhhcccccCCCceEEEECCc----CCHHHHHHHHHHHcCCCeEEEEEe
Confidence 9999999886542 368999999653 466889999999999999998754
No 132
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.75 E-value=7.6e-18 Score=125.13 Aligned_cols=116 Identities=11% Similarity=-0.040 Sum_probs=89.0
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 99 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 99 (222)
..+...+++.+...++.+|||+|||+|.++..+++. +.+|+++|+|+.|++.++++.... .+.....++..
T Consensus 31 ~~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~------~v~~~~~~~~~ 101 (261)
T 3iv6_A 31 PSDRENDIFLENIVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADR------CVTIDLLDITA 101 (261)
T ss_dssp CCHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSS------CCEEEECCTTS
T ss_pred HHHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhc------cceeeeeeccc
Confidence 345567777788888999999999999999999876 469999999999999999886422 12222222211
Q ss_pred --cCCCCCceeEEEEcccccCcc--cHHHHHHHHhcccCCCcEEEEEecC
Q 027517 100 --LPFSDCFFDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 100 --~~~~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
.....++||+|+++.+++|+. +...+++++.++| |||++++....
T Consensus 102 ~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 102 EIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp CCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred ccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 111246899999999999884 5677999999999 99999987654
No 133
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.75 E-value=4.3e-18 Score=118.78 Aligned_cols=105 Identities=10% Similarity=0.120 Sum_probs=86.0
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
++..+|||+|||+|.++..++.. .++.+|+++|+|+.+++.+++++...+.. .++.+ .|.... .+.++||+|++
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~-~p~a~~~A~Di~~~~leiar~~~~~~g~~--~~v~~--~d~~~~-~~~~~~DvVLa 121 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNE-NEKIIYHAYDIDRAEIAFLSSIIGKLKTT--IKYRF--LNKESD-VYKGTYDVVFL 121 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCS-SCCCEEEEECSCHHHHHHHHHHHHHSCCS--SEEEE--ECCHHH-HTTSEEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhc-CCCCEEEEEeCCHHHHHHHHHHHHhcCCC--ccEEE--eccccc-CCCCCcChhhH
Confidence 56779999999999999999877 46779999999999999999998765432 24555 565543 34578999999
Q ss_pred cccccCcccHHHHHHHHhcccCCCcEEEEEe
Q 027517 113 GYGLRNVVDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 113 ~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
..++|++++....+.++.+.|+|||.++-.+
T Consensus 122 ~k~LHlL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 122 LKMLPVLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp ETCHHHHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred hhHHHhhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 9999999777778889999999999886554
No 134
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.75 E-value=4.6e-17 Score=115.29 Aligned_cols=112 Identities=18% Similarity=0.232 Sum_probs=92.7
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 99 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 99 (222)
......+...+...++.+|||+|||+|..+..+++ +..+++++|+++.+++.++++....+. +++.++++|+.+
T Consensus 21 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~~d~~~ 94 (183)
T 2yxd_A 21 EEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNI---KNCQIIKGRAED 94 (183)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTC---CSEEEEESCHHH
T ss_pred HHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCC---CcEEEEECCccc
Confidence 44456677777777888999999999999999986 466999999999999999998765432 479999999887
Q ss_pred cCCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 100 LPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 100 ~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
++++++||+|++..+ .+...+++.+.+. |||.+++...
T Consensus 95 -~~~~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 95 -VLDKLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp -HGGGCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred -cccCCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEec
Confidence 455568999999887 5678889999988 9999998764
No 135
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.75 E-value=2.9e-17 Score=117.20 Aligned_cols=116 Identities=22% Similarity=0.302 Sum_probs=93.6
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 99 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 99 (222)
...+..+...+...++.+|||+|||+|..+..+++.. .+++++|+++.+++.++++....+.. .++.+.+.|+.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~ 93 (192)
T 1l3i_A 19 MEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLG--DNVTLMEGDAPE 93 (192)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCC--TTEEEEESCHHH
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCC--cceEEEecCHHH
Confidence 4445666777778888999999999999999998763 69999999999999999887554321 478999999876
Q ss_pred cCCCC-CceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 100 LPFSD-CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 100 ~~~~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
+.+. ++||+|++..++++ ...+++.+.++|+|||.+++...
T Consensus 94 -~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 94 -ALCKIPDIDIAVVGGSGGE---LQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp -HHTTSCCEEEEEESCCTTC---HHHHHHHHHHTEEEEEEEEEEEC
T ss_pred -hcccCCCCCEEEECCchHH---HHHHHHHHHHhcCCCcEEEEEec
Confidence 2222 57999999887654 57889999999999999988654
No 136
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.75 E-value=5.7e-18 Score=131.65 Aligned_cols=125 Identities=14% Similarity=0.086 Sum_probs=98.0
Q ss_pred HHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhh----h-hhc-CCCeeEEeC
Q 027517 22 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLV----S-KAC-YKNIEWVEG 95 (222)
Q Consensus 22 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~----~-~~~-~~~i~~~~~ 95 (222)
....++..+...++.+|||||||+|..+..++... +..+++|+|+++.+++.|++..... . .+. ..+++++++
T Consensus 161 ~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~-g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~G 239 (438)
T 3uwp_A 161 LVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAAT-NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERG 239 (438)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHC-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEEC
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEEC
Confidence 34556677788899999999999999999998874 3336999999999999998754221 0 111 157999999
Q ss_pred CCCCcCCCC--CceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCC
Q 027517 96 DALDLPFSD--CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKST 148 (222)
Q Consensus 96 d~~~~~~~~--~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~ 148 (222)
|+.++++.+ ..+|+|+++..+ +.++....|.++.+.|||||++++.+...+.
T Consensus 240 D~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p~ 293 (438)
T 3uwp_A 240 DFLSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSKPFAPL 293 (438)
T ss_dssp CTTSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESSCSSCT
T ss_pred cccCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEeecccCC
Confidence 999876542 369999998776 4578888999999999999999998776544
No 137
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.75 E-value=7.6e-17 Score=121.75 Aligned_cols=140 Identities=19% Similarity=0.236 Sum_probs=107.3
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
.++.+|||+|||+|.++..+++.. .. +|+++|+++.+++.++++....+.. .+++++++|+.++.. .++||+|++
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~-~~-~V~~vD~s~~~~~~a~~n~~~n~~~--~~v~~~~~D~~~~~~-~~~fD~Vi~ 198 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYG-KA-KVIAIEKDPYTFKFLVENIHLNKVE--DRMSAYNMDNRDFPG-ENIADRILM 198 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHT-CC-EEEEECCCHHHHHHHHHHHHHTTCT--TTEEEECSCTTTCCC-CSCEEEEEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhC-CC-EEEEEECCHHHHHHHHHHHHHcCCC--ceEEEEECCHHHhcc-cCCccEEEE
Confidence 568899999999999999999873 32 7999999999999999987655432 458999999998765 578999999
Q ss_pred cccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcCCHHH
Q 027517 113 GYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKD 192 (222)
Q Consensus 113 ~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (222)
... .....+++.+.++|+|||.+++.+....... .....++
T Consensus 199 ~~p----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-----------------------------------~~~~~~~ 239 (278)
T 2frn_A 199 GYV----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM-----------------------------------PREPFET 239 (278)
T ss_dssp CCC----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT-----------------------------------TTTTHHH
T ss_pred CCc----hhHHHHHHHHHHHCCCCeEEEEEEeeccccc-----------------------------------cccHHHH
Confidence 654 2346688899999999999998765531100 0123467
Q ss_pred HHHHHHHcCCeEEE-----EeeecCCeee
Q 027517 193 LEKLALEIGFSRAK-----HYELSGGLMG 216 (222)
Q Consensus 193 ~~~~l~~~Gf~~~~-----~~~~~~~~~~ 216 (222)
+.+.++++||++.. +..+..+.+.
T Consensus 240 i~~~~~~~G~~~~~~~~~~v~~~~p~~~h 268 (278)
T 2frn_A 240 FKRITKEYGYDVEKLNELKIKRYAPGVWH 268 (278)
T ss_dssp HHHHHHHTTCEEEEEEEEEEEEETTTEEE
T ss_pred HHHHHHHcCCeeEEeeeEEEEecCCCceE
Confidence 78999999999876 5555555544
No 138
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.74 E-value=2.5e-17 Score=124.47 Aligned_cols=113 Identities=23% Similarity=0.320 Sum_probs=93.4
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCC
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 103 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 103 (222)
..++..+...++.+|||+|||+|.++..+++.+++..+++++|+++.+++.++++....+.. .++.+...|+.+. ++
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~-~~ 178 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLI--ERVTIKVRDISEG-FD 178 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCG--GGEEEECCCGGGC-CS
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC--CCEEEEECCHHHc-cc
Confidence 34556667788899999999999999999988666779999999999999999987654321 4789999998875 45
Q ss_pred CCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 104 DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
.++||+|++ +.+++..+++++.++|+|||.+++.+.
T Consensus 179 ~~~~D~V~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 179 EKDVDALFL-----DVPDPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp CCSEEEEEE-----CCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred CCccCEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 568999998 346667889999999999999988753
No 139
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.74 E-value=1e-17 Score=131.34 Aligned_cols=106 Identities=16% Similarity=0.195 Sum_probs=91.1
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.++++....+ .++++++.|+.+...+.++||+|++
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~----~~v~~~~~D~~~~~~~~~~fD~Ii~ 304 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANA----LKAQALHSDVDEALTEEARFDIIVT 304 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTT----CCCEEEECSTTTTSCTTCCEEEEEE
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcC----CCeEEEEcchhhccccCCCeEEEEE
Confidence 46779999999999999999976 4599999999999999999886544 3589999999987665578999999
Q ss_pred cccccC-----cccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 113 GYGLRN-----VVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 113 ~~~l~~-----~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
+.++++ ..+...+++++.+.|+|||.++++...
T Consensus 305 npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 305 NPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp CCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred CCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 999987 456788999999999999999987543
No 140
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.74 E-value=2.1e-17 Score=120.78 Aligned_cols=120 Identities=9% Similarity=0.131 Sum_probs=94.6
Q ss_pred HHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC-cCC-
Q 027517 25 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD-LPF- 102 (222)
Q Consensus 25 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~- 102 (222)
.+.......++.+|||+|||+|..+..+++.++++.+|+++|+++.+++.+++++...+.. .+++++++|+.+ ++.
T Consensus 49 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~l~~~ 126 (221)
T 3u81_A 49 IMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQ--DKVTILNGASQDLIPQL 126 (221)
T ss_dssp HHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG--GGEEEEESCHHHHGGGT
T ss_pred HHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCC--CceEEEECCHHHHHHHH
Confidence 3333444456789999999999999999987655789999999999999999988765432 469999999865 222
Q ss_pred C----CCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCC
Q 027517 103 S----DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKS 147 (222)
Q Consensus 103 ~----~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~ 147 (222)
+ .++||+|++....++..+....++.+ ++|+|||.+++.+...+
T Consensus 127 ~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~~ 174 (221)
T 3u81_A 127 KKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIVP 174 (221)
T ss_dssp TTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCCC
T ss_pred HHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCCc
Confidence 1 26899999998887777666778888 99999999988766543
No 141
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.73 E-value=4.3e-17 Score=118.23 Aligned_cols=113 Identities=17% Similarity=0.096 Sum_probs=94.9
Q ss_pred HHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc
Q 027517 21 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL 100 (222)
Q Consensus 21 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 100 (222)
.....+.+.+...++.+|||+|||+|..+..+++. ..+++++|+++.+++.++++....+. .++.+..+|+.+.
T Consensus 64 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~ 137 (210)
T 3lbf_A 64 YMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDL---HNVSTRHGDGWQG 137 (210)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEESCGGGC
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCC---CceEEEECCcccC
Confidence 33455666777788999999999999999999987 46999999999999999998765432 4799999999886
Q ss_pred CCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 101 PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 101 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
..+.++||+|++..+++++++ .+.+.|+|||++++....
T Consensus 138 ~~~~~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 138 WQARAPFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CGGGCCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred CccCCCccEEEEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 555678999999999999886 578899999999887665
No 142
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.73 E-value=2.3e-17 Score=123.62 Aligned_cols=109 Identities=19% Similarity=0.210 Sum_probs=84.4
Q ss_pred CCCeEEEecCCCCh----hHHHHHHHhCC---CCcEEEEeCChhHHHHHhcchhhhh-----------------------
Q 027517 34 TGDNVLDVCCGSGD----LSFLLSEQVGS---QGKVIGLDFSKNQLSMASSRQDLVS----------------------- 83 (222)
Q Consensus 34 ~~~~vLdiG~G~G~----~~~~l~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~----------------------- 83 (222)
++.+|+|+|||+|. ++..+++.++. +.+|+|+|+|+.+++.|++......
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45699999999998 44445555432 3589999999999999998642100
Q ss_pred -----hhcCCCeeEEeCCCCCcCCC-CCceeEEEEcccccCcccH--HHHHHHHhcccCCCcEEEEE
Q 027517 84 -----KACYKNIEWVEGDALDLPFS-DCFFDAITMGYGLRNVVDK--RKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 84 -----~~~~~~i~~~~~d~~~~~~~-~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~l~~gG~l~i~ 142 (222)
.....++.+.+.|+.+.+++ .++||+|+|.++++|+++. .++++++++.|+|||+|++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 00113799999999886554 4689999999999999654 78999999999999999873
No 143
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.73 E-value=9.5e-17 Score=116.49 Aligned_cols=141 Identities=16% Similarity=0.042 Sum_probs=108.3
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
+++.+|+|+|||+|.++..+++. ++..+|+++|+++.+++.|+++....+.. .++++..+|..+...+.++||+|+.
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~~~al~~A~~N~~~~gl~--~~I~~~~gD~l~~~~~~~~~D~Ivi 96 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVVNGPYQSALKNVSEHGLT--SKIDVRLANGLSAFEEADNIDTITI 96 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHT-TCEEEEEEEESSHHHHHHHHHHHHHTTCT--TTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEECchhhccccccccCEEEE
Confidence 56789999999999999999987 45568999999999999999998776543 5799999999886544346999886
Q ss_pred cccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcCCHHH
Q 027517 113 GYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKD 192 (222)
Q Consensus 113 ~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (222)
.+... .-...++....+.|+++|++++... ...+.
T Consensus 97 aGmGg--~lI~~IL~~~~~~l~~~~~lIlqp~-------------------------------------------~~~~~ 131 (230)
T 3lec_A 97 CGMGG--RLIADILNNDIDKLQHVKTLVLQPN-------------------------------------------NREDD 131 (230)
T ss_dssp EEECH--HHHHHHHHHTGGGGTTCCEEEEEES-------------------------------------------SCHHH
T ss_pred eCCch--HHHHHHHHHHHHHhCcCCEEEEECC-------------------------------------------CChHH
Confidence 55433 2356788889999999999987532 13468
Q ss_pred HHHHHHHcCCeEEEEeee--cCCeeeeEeee
Q 027517 193 LEKLALEIGFSRAKHYEL--SGGLMGNLVAT 221 (222)
Q Consensus 193 ~~~~l~~~Gf~~~~~~~~--~~~~~~~~~~~ 221 (222)
++++|.+.||.+++..-. .+..+.++.++
T Consensus 132 lr~~L~~~Gf~i~~E~lv~e~~~~Yeii~~~ 162 (230)
T 3lec_A 132 LRKWLAANDFEIVAEDILTENDKRYEILVVK 162 (230)
T ss_dssp HHHHHHHTTEEEEEEEEEEC--CEEEEEEEE
T ss_pred HHHHHHHCCCEEEEEEEEEECCEEEEEEEEE
Confidence 889999999999886633 34455555554
No 144
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.73 E-value=4.5e-17 Score=126.31 Aligned_cols=116 Identities=22% Similarity=0.235 Sum_probs=94.6
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 99 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 99 (222)
..+++.+.+.....++.+|||+|||+|.++..+++. + ..+|+++|+++ +++.++++....+.. +++.++++|+.+
T Consensus 50 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~gvD~s~-~~~~a~~~~~~~~~~--~~i~~~~~d~~~ 124 (340)
T 2fyt_A 50 ESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKA-G-AKKVLGVDQSE-ILYQAMDIIRLNKLE--DTITLIKGKIEE 124 (340)
T ss_dssp HHHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESST-HHHHHHHHHHHTTCT--TTEEEEESCTTT
T ss_pred HHHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHc-C-CCEEEEEChHH-HHHHHHHHHHHcCCC--CcEEEEEeeHHH
Confidence 345566666666678889999999999999988876 2 34899999996 999998887654432 589999999999
Q ss_pred cCCCCCceeEEEEcc---cccCcccHHHHHHHHhcccCCCcEEE
Q 027517 100 LPFSDCFFDAITMGY---GLRNVVDKRKALEESFRVLKPGSRIS 140 (222)
Q Consensus 100 ~~~~~~~~D~v~~~~---~l~~~~~~~~~l~~~~~~l~~gG~l~ 140 (222)
++++.++||+|++.. .+.+..+...+++.+.++|||||.++
T Consensus 125 ~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 125 VHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hcCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 887777899999876 45555677889999999999999987
No 145
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.73 E-value=2.3e-16 Score=123.20 Aligned_cols=121 Identities=21% Similarity=0.266 Sum_probs=98.6
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 99 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 99 (222)
......++......++.+|||+|||+|.++..++...++..+++|+|+++.+++.+++++...+. .++++.+.|+.+
T Consensus 189 ~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~---~~i~~~~~D~~~ 265 (354)
T 3tma_A 189 PVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL---SWIRFLRADARH 265 (354)
T ss_dssp HHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC---TTCEEEECCGGG
T ss_pred HHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC---CceEEEeCChhh
Confidence 44555666777778888999999999999999998754567999999999999999999866543 379999999999
Q ss_pred cCCCCCceeEEEEcccccCccc--------HHHHHHHHhcccCCCcEEEEEe
Q 027517 100 LPFSDCFFDAITMGYGLRNVVD--------KRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 100 ~~~~~~~~D~v~~~~~l~~~~~--------~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
++.+.++||+|+++..+..... ...+++.+++.|+|||.+++..
T Consensus 266 ~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 266 LPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp GGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred CccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 8766667999999877654321 3678999999999999998864
No 146
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.73 E-value=1.9e-17 Score=123.55 Aligned_cols=156 Identities=10% Similarity=0.036 Sum_probs=101.4
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc---CCC---CCce
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL---PFS---DCFF 107 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~---~~~---~~~~ 107 (222)
++.+|||+|||+|..+..+++.. ++.+++++|+++.+++.++++....+.. .++.++++|+.+. +++ +++|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNNLS--DLIKVVKVPQKTLLMDALKEESEIIY 141 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEECCTTCSSTTTSTTCCSCCB
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcCCC--ccEEEEEcchhhhhhhhhhcccCCcc
Confidence 56799999999999999988875 4579999999999999999987654432 3599999997652 333 2579
Q ss_pred eEEEEcccccCcc-c--------------HHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCC
Q 027517 108 DAITMGYGLRNVV-D--------------KRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYG 172 (222)
Q Consensus 108 D~v~~~~~l~~~~-~--------------~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (222)
|+|+++..+++.. + ...++.++.++|||||.+.+.+. ................
T Consensus 142 D~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~------~~~~~~~~l~~~g~~~------ 209 (254)
T 2h00_A 142 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKR------IIHDSLQLKKRLRWYS------ 209 (254)
T ss_dssp SEEEECCCCC-------------------------CTTTTHHHHTHHHHHHH------HHHHHHHHGGGBSCEE------
T ss_pred cEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHH------HHHHHHhcccceEEEE------
Confidence 9999987766443 1 12456788999999998866421 1111111110000000
Q ss_pred hhHHHHHhHHhHhhcCCHHHHHHHHHHcCCeEEEEeeecCC
Q 027517 173 LAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELSGG 213 (222)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 213 (222)
.......+.+++.++++++||+.++......|
T Consensus 210 ---------~~~~~~~~~~~~~~~l~~~Gf~~v~~~~~~~g 241 (254)
T 2h00_A 210 ---------CMLGKKCSLAPLKEELRIQGVPKVTYTEFCQG 241 (254)
T ss_dssp ---------EEESSTTSHHHHHHHHHHTTCSEEEEEEEEET
T ss_pred ---------ECCCChhHHHHHHHHHHHcCCCceEEEEEecC
Confidence 00011224478999999999999988777654
No 147
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.73 E-value=2.5e-16 Score=117.06 Aligned_cols=110 Identities=17% Similarity=0.231 Sum_probs=89.4
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC-cCCC--CCce
Q 027517 31 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD-LPFS--DCFF 107 (222)
Q Consensus 31 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~~--~~~~ 107 (222)
...++.+|||+|||+|..+..+++.++++.+++++|+++.+++.+++++...+.. .++.+.++|+.+ ++.. .++|
T Consensus 60 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~--~~v~~~~~d~~~~l~~~~~~~~f 137 (248)
T 3tfw_A 60 RLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVD--QRVTLREGPALQSLESLGECPAF 137 (248)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCT--TTEEEEESCHHHHHHTCCSCCCC
T ss_pred hhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEEcCHHHHHHhcCCCCCe
Confidence 4456789999999999999999988754779999999999999999988655432 479999999876 3322 2489
Q ss_pred eEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 108 DAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 108 D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
|+|++... .++....++++.++|||||.+++.+..
T Consensus 138 D~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 138 DLIFIDAD---KPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp SEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred EEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 99998653 456678999999999999999886544
No 148
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.72 E-value=1.6e-16 Score=122.01 Aligned_cols=118 Identities=19% Similarity=0.269 Sum_probs=93.2
Q ss_pred HHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCC
Q 027517 25 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 104 (222)
Q Consensus 25 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 104 (222)
.+...+...++.+|||+|||+|..+..+++.+++.++++++|+++.+++.++++....+. .++.++++|+.+++...
T Consensus 109 l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~---~~v~~~~~D~~~~~~~~ 185 (315)
T 1ixk_A 109 YPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV---LNVILFHSSSLHIGELN 185 (315)
T ss_dssp HHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC---CSEEEESSCGGGGGGGC
T ss_pred HHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC---CeEEEEECChhhccccc
Confidence 344556778889999999999999999999875567999999999999999999876543 47999999998865445
Q ss_pred CceeEEEEccc------ccCccc----------------HHHHHHHHhcccCCCcEEEEEecC
Q 027517 105 CFFDAITMGYG------LRNVVD----------------KRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 105 ~~~D~v~~~~~------l~~~~~----------------~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
++||+|++... +++.++ ...+++++.+.|||||++++.+.+
T Consensus 186 ~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 186 VEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp CCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred ccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 67999998533 332222 158899999999999999887654
No 149
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.72 E-value=2.1e-17 Score=120.35 Aligned_cols=106 Identities=10% Similarity=0.105 Sum_probs=87.1
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-C--CCCCceeEE
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-P--FSDCFFDAI 110 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~--~~~~~~D~v 110 (222)
++.+|||||||+|..+..+++.. ++..++|+|+++.+++.++++....+. .++.++++|+.++ + +++++||.|
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l---~nv~~~~~Da~~~l~~~~~~~~~d~v 109 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGL---SNLRVMCHDAVEVLHKMIPDNSLRMV 109 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTC---SSEEEECSCHHHHHHHHSCTTCEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCC---CcEEEEECCHHHHHHHHcCCCChheE
Confidence 56799999999999999999884 677899999999999999988755432 5899999998874 3 567899999
Q ss_pred EEcccccCcccH--------HHHHHHHhcccCCCcEEEEEe
Q 027517 111 TMGYGLRNVVDK--------RKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 111 ~~~~~l~~~~~~--------~~~l~~~~~~l~~gG~l~i~~ 143 (222)
++++...+.... ..+++.+.++|||||.+++.+
T Consensus 110 ~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 110 QLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp EEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 998655433221 259999999999999998865
No 150
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.72 E-value=1.5e-16 Score=120.40 Aligned_cols=116 Identities=22% Similarity=0.252 Sum_probs=95.9
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhh-hhhcCCCeeEEeCCCCCcCC
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLV-SKACYKNIEWVEGDALDLPF 102 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~d~~~~~~ 102 (222)
..++..+...++.+|||+|||+|.++..+++.+++..+++++|+++.+++.++++.... + ....++.+..+|+.+.++
T Consensus 89 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g-~~~~~v~~~~~d~~~~~~ 167 (280)
T 1i9g_A 89 AQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYG-QPPDNWRLVVSDLADSEL 167 (280)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHT-SCCTTEEEECSCGGGCCC
T ss_pred HHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCCcEEEEECchHhcCC
Confidence 45666677788899999999999999999987666779999999999999999887543 2 001589999999988776
Q ss_pred CCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 103 SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
++++||+|++ +.+++..+++++.++|+|||.+++..+.
T Consensus 168 ~~~~~D~v~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 168 PDGSVDRAVL-----DMLAPWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp CTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred CCCceeEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 6678999998 3456678899999999999999987654
No 151
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.72 E-value=1.2e-16 Score=116.18 Aligned_cols=116 Identities=20% Similarity=0.147 Sum_probs=94.3
Q ss_pred HHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC
Q 027517 22 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP 101 (222)
Q Consensus 22 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 101 (222)
....+.+.+...++.+|||+|||+|..+..+++..++..+++++|+++.+++.++++....+. .++.+...|+....
T Consensus 65 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~ 141 (215)
T 2yxe_A 65 MVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY---DNVIVIVGDGTLGY 141 (215)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC---TTEEEEESCGGGCC
T ss_pred HHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CCeEEEECCcccCC
Confidence 334566667778889999999999999999999875557999999999999999988765432 47899999986532
Q ss_pred CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCC
Q 027517 102 FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 102 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
...++||+|++..++++++ +++.+.|+|||++++.....
T Consensus 142 ~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 142 EPLAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp GGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEESSS
T ss_pred CCCCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEECCC
Confidence 2246799999999999887 37889999999999886554
No 152
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.72 E-value=9.5e-17 Score=125.78 Aligned_cols=123 Identities=16% Similarity=0.202 Sum_probs=96.8
Q ss_pred HHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc
Q 027517 21 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL 100 (222)
Q Consensus 21 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 100 (222)
...+.+++.+...++.+|||+|||+|.++..+++.. ++.+|+++|+++.+++.++++....+.....++.+...|+.+
T Consensus 209 ~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~- 286 (375)
T 4dcm_A 209 IGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS- 286 (375)
T ss_dssp HHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-
T ss_pred HHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-
Confidence 344566777777777899999999999999999984 677999999999999999998876543322368889999987
Q ss_pred CCCCCceeEEEEcccccCcc-----cHHHHHHHHhcccCCCcEEEEEecC
Q 027517 101 PFSDCFFDAITMGYGLRNVV-----DKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 101 ~~~~~~~D~v~~~~~l~~~~-----~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
+++.++||+|+++.++|+.. ....+++++.++|+|||.++++...
T Consensus 287 ~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 287 GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 44567899999999988532 1346899999999999999987543
No 153
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.71 E-value=1.7e-16 Score=115.04 Aligned_cols=141 Identities=18% Similarity=0.098 Sum_probs=106.3
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
+++.+|+|+|||+|..+..+++. ++..+|+++|+++.+++.|+++....+.. .++++..+|..+.-.+.++||+|+.
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~--~~i~~~~~d~l~~l~~~~~~D~Ivi 90 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVER-GQIKSAIAGEVVEGPYQSAVKNVEAHGLK--EKIQVRLANGLAAFEETDQVSVITI 90 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCT--TTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCC--ceEEEEECchhhhcccCcCCCEEEE
Confidence 56789999999999999999987 45668999999999999999998776543 4799999998652111226999887
Q ss_pred cccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcCCHHH
Q 027517 113 GYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKD 192 (222)
Q Consensus 113 ~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (222)
...-. .-...++......|+++|++++... -..+.
T Consensus 91 aG~Gg--~~i~~Il~~~~~~L~~~~~lVlq~~-------------------------------------------~~~~~ 125 (225)
T 3kr9_A 91 AGMGG--RLIARILEEGLGKLANVERLILQPN-------------------------------------------NREDD 125 (225)
T ss_dssp EEECH--HHHHHHHHHTGGGCTTCCEEEEEES-------------------------------------------SCHHH
T ss_pred cCCCh--HHHHHHHHHHHHHhCCCCEEEEECC-------------------------------------------CCHHH
Confidence 55422 2257789999999999999987532 13467
Q ss_pred HHHHHHHcCCeEEEEee--ecCCeeeeEeee
Q 027517 193 LEKLALEIGFSRAKHYE--LSGGLMGNLVAT 221 (222)
Q Consensus 193 ~~~~l~~~Gf~~~~~~~--~~~~~~~~~~~~ 221 (222)
+++.|.+.||.+++..- ..+..+.++.++
T Consensus 126 vr~~L~~~Gf~i~~e~lv~e~~~~Yeii~~~ 156 (225)
T 3kr9_A 126 LRIWLQDHGFQIVAESILEEAGKFYEILVVE 156 (225)
T ss_dssp HHHHHHHTTEEEEEEEEEEETTEEEEEEEEE
T ss_pred HHHHHHHCCCEEEEEEEEEECCEEEEEEEEE
Confidence 88999999999987653 234455555543
No 154
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.71 E-value=2.1e-16 Score=115.61 Aligned_cols=140 Identities=12% Similarity=0.069 Sum_probs=106.4
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
+++.+|||+|||+|.++..+++. ++..+++++|+++.+++.|++++...+.. .++++..+|..+...+.++||+|++
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~--~~I~v~~gD~l~~~~~~~~~D~Ivi 96 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKN-QTASFAIAGEVVDGPFQSAQKQVRSSGLT--EQIDVRKGNGLAVIEKKDAIDTIVI 96 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCT--TTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCC--ceEEEEecchhhccCccccccEEEE
Confidence 56789999999999999999987 45568999999999999999998766543 4699999998885443335999886
Q ss_pred cccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcCCHHH
Q 027517 113 GYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKD 192 (222)
Q Consensus 113 ~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (222)
.+... .-...++....+.|++++++++.... ..+.
T Consensus 97 agmGg--~lI~~IL~~~~~~L~~~~~lIlq~~~-------------------------------------------~~~~ 131 (244)
T 3gnl_A 97 AGMGG--TLIRTILEEGAAKLAGVTKLILQPNI-------------------------------------------AAWQ 131 (244)
T ss_dssp EEECH--HHHHHHHHHTGGGGTTCCEEEEEESS-------------------------------------------CHHH
T ss_pred eCCch--HHHHHHHHHHHHHhCCCCEEEEEcCC-------------------------------------------ChHH
Confidence 54322 23467888999999999999876321 3468
Q ss_pred HHHHHHHcCCeEEEEeee--cCCeeeeEee
Q 027517 193 LEKLALEIGFSRAKHYEL--SGGLMGNLVA 220 (222)
Q Consensus 193 ~~~~l~~~Gf~~~~~~~~--~~~~~~~~~~ 220 (222)
+++.|.+.||.+++..-. .+..+-++.+
T Consensus 132 lr~~L~~~Gf~i~~E~lv~e~~k~Yeii~~ 161 (244)
T 3gnl_A 132 LREWSEQNNWLITSEAILREDNKVYEIMVL 161 (244)
T ss_dssp HHHHHHHHTEEEEEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHCCCEEEEEEEEEECCEEEEEEEE
Confidence 889999999998765533 3344445444
No 155
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.71 E-value=1.2e-16 Score=125.51 Aligned_cols=120 Identities=19% Similarity=0.157 Sum_probs=96.1
Q ss_pred hhhHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCC
Q 027517 18 QHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA 97 (222)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~ 97 (222)
....+.+.+.......++.+|||+|||+|.++..+++. + ..+|+++|++ .+++.++++....+.. .+++++++|+
T Consensus 47 r~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~-g-~~~V~gvD~s-~~~~~a~~~~~~~~~~--~~v~~~~~d~ 121 (376)
T 3r0q_C 47 RMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQA-G-ARKVYAVEAT-KMADHARALVKANNLD--HIVEVIEGSV 121 (376)
T ss_dssp HHHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHT-T-CSEEEEEESS-TTHHHHHHHHHHTTCT--TTEEEEESCG
T ss_pred HHHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhc-C-CCEEEEEccH-HHHHHHHHHHHHcCCC--CeEEEEECch
Confidence 34555666666666678899999999999999999876 2 2389999999 9999999887655432 4699999999
Q ss_pred CCcCCCCCceeEEEEcccccCc---ccHHHHHHHHhcccCCCcEEEEEe
Q 027517 98 LDLPFSDCFFDAITMGYGLRNV---VDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 98 ~~~~~~~~~~D~v~~~~~l~~~---~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
.+++++ ++||+|++....+.. .....+++.+.++|+|||.+++..
T Consensus 122 ~~~~~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 122 EDISLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp GGCCCS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred hhcCcC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 998776 789999996654444 457889999999999999997643
No 156
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.71 E-value=2.3e-16 Score=118.00 Aligned_cols=114 Identities=15% Similarity=0.206 Sum_probs=90.2
Q ss_pred HHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhh---hhhhcCCCeeEEeCCCCCc---
Q 027517 27 VSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDL---VSKACYKNIEWVEGDALDL--- 100 (222)
Q Consensus 27 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~~~d~~~~--- 100 (222)
..+....++.+|||+|||+|..+..+++.. +..+++++|+++.+++.++++... .+.. .++.++++|+.+.
T Consensus 29 ~~~~~~~~~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~--~~v~~~~~D~~~~~~~ 105 (260)
T 2ozv_A 29 ASLVADDRACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPDNAAFS--ARIEVLEADVTLRAKA 105 (260)
T ss_dssp HHTCCCCSCEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGGGTTTG--GGEEEEECCTTCCHHH
T ss_pred HHHhcccCCCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhhhCCCc--ceEEEEeCCHHHHhhh
Confidence 345566677899999999999999999884 567999999999999999998765 3322 3699999999886
Q ss_pred ----CCCCCceeEEEEcccccCc------------------ccHHHHHHHHhcccCCCcEEEEEe
Q 027517 101 ----PFSDCFFDAITMGYGLRNV------------------VDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 101 ----~~~~~~~D~v~~~~~l~~~------------------~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
.++.++||+|+++..+... .....+++.+.++|+|||.+++..
T Consensus 106 ~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 106 RVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp HHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 2456789999998554432 236788999999999999998853
No 157
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.71 E-value=1.1e-16 Score=123.08 Aligned_cols=116 Identities=25% Similarity=0.350 Sum_probs=95.1
Q ss_pred HHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc
Q 027517 21 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL 100 (222)
Q Consensus 21 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 100 (222)
.....+.+.+...++.+|||+|||+|..+..+++......+|+++|+++++++.++++....+. .++.+..+|+.+.
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~---~~v~~~~~d~~~~ 138 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI---ENVIFVCGDGYYG 138 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEESCGGGC
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCeEEEECChhhc
Confidence 3445666777778899999999999999999998864346799999999999999998765432 4699999999875
Q ss_pred CCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 101 PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 101 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
..+.++||+|++..++++++ +.+.+.|||||++++....
T Consensus 139 ~~~~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 139 VPEFSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp CGGGCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBCB
T ss_pred cccCCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEECC
Confidence 44456899999999999987 4678899999999987544
No 158
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.71 E-value=1.1e-17 Score=122.87 Aligned_cols=157 Identities=18% Similarity=0.130 Sum_probs=91.6
Q ss_pred HHHhhCC-CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCC
Q 027517 26 AVSWSGA-KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 104 (222)
Q Consensus 26 ~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 104 (222)
+++.+.. .++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.++++..........++.+.. ..++ +.
T Consensus 28 ~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~-g-~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~--~~~~--~~ 101 (232)
T 3opn_A 28 ALKEFHLEINGKTCLDIGSSTGGFTDVMLQN-G-AKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAV--LADF--EQ 101 (232)
T ss_dssp HHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCC--GGGC--CS
T ss_pred HHHHcCCCCCCCEEEEEccCCCHHHHHHHhc-C-CCEEEEEcCCHHHHHHHHHhCccccccccceEEEeC--HhHc--Cc
Confidence 3344433 35679999999999999999876 2 248999999999999877654221100001222211 1111 11
Q ss_pred CceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhH
Q 027517 105 CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSI 184 (222)
Q Consensus 105 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (222)
..+|.+.+..++.++ ..++++++++|||||.+++.. . +............ +.... ..
T Consensus 102 ~~~d~~~~D~v~~~l---~~~l~~i~rvLkpgG~lv~~~--~---p~~e~~~~~~~~~------G~~~d---------~~ 158 (232)
T 3opn_A 102 GRPSFTSIDVSFISL---DLILPPLYEILEKNGEVAALI--K---PQFEAGREQVGKN------GIIRD---------PK 158 (232)
T ss_dssp CCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEE--C---HHHHSCHHHHC-C------CCCCC---------HH
T ss_pred CCCCEEEEEEEhhhH---HHHHHHHHHhccCCCEEEEEE--C---cccccCHHHhCcC------CeecC---------cc
Confidence 123444444444443 678999999999999998853 1 1111100000000 00000 11
Q ss_pred hhcCCHHHHHHHHHHcCCeEEEEeeec
Q 027517 185 REFLTGKDLEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 185 ~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 211 (222)
.+..+.+++.++++++||++......+
T Consensus 159 ~~~~~~~~l~~~l~~aGf~v~~~~~~p 185 (232)
T 3opn_A 159 VHQMTIEKVLKTATQLGFSVKGLTFSP 185 (232)
T ss_dssp HHHHHHHHHHHHHHHHTEEEEEEEECS
T ss_pred hhHHHHHHHHHHHHHCCCEEEEEEEcc
Confidence 123478899999999999998876543
No 159
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.70 E-value=7.5e-17 Score=125.54 Aligned_cols=115 Identities=18% Similarity=0.152 Sum_probs=91.9
Q ss_pred HHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC
Q 027517 22 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP 101 (222)
Q Consensus 22 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 101 (222)
+.+.+.......++.+|||+|||+|.++..+++. +..+|+++|+| ++++.++++....+.. .++.++++|+.+++
T Consensus 54 ~~~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s-~~l~~a~~~~~~~~~~--~~v~~~~~d~~~~~ 128 (349)
T 3q7e_A 54 YRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKA--GARKVIGIECS-SISDYAVKIVKANKLD--HVVTIIKGKVEEVE 128 (349)
T ss_dssp HHHHHHTCHHHHTTCEEEEESCTTSHHHHHHHHT--TCSEEEEEECS-THHHHHHHHHHHTTCT--TTEEEEESCTTTCC
T ss_pred HHHHHHhccccCCCCEEEEEeccchHHHHHHHHC--CCCEEEEECcH-HHHHHHHHHHHHcCCC--CcEEEEECcHHHcc
Confidence 4444444334457889999999999999999876 34599999999 5999999887654432 46999999999988
Q ss_pred CCCCceeEEEEccc---ccCcccHHHHHHHHhcccCCCcEEEE
Q 027517 102 FSDCFFDAITMGYG---LRNVVDKRKALEESFRVLKPGSRISV 141 (222)
Q Consensus 102 ~~~~~~D~v~~~~~---l~~~~~~~~~l~~~~~~l~~gG~l~i 141 (222)
++.++||+|++..+ +++.++...+++.+.++|||||.++.
T Consensus 129 ~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 129 LPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp CSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred CCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 87789999998665 33446788999999999999999874
No 160
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.70 E-value=6.4e-16 Score=119.85 Aligned_cols=117 Identities=27% Similarity=0.426 Sum_probs=89.8
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhh--------hcCCCeeEEeC
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK--------ACYKNIEWVEG 95 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--------~~~~~i~~~~~ 95 (222)
..++..+...++.+|||+|||+|.++..+++..++..+++++|+++.+++.++++....+. ....++.+..+
T Consensus 95 ~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~ 174 (336)
T 2b25_A 95 NMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK 174 (336)
T ss_dssp HHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEEC
Confidence 4556666778899999999999999999999876667999999999999999998764320 01158999999
Q ss_pred CCCCc--CCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 96 DALDL--PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 96 d~~~~--~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
|+.+. ++++++||+|++.. +++..+++++.+.|+|||.+++....
T Consensus 175 d~~~~~~~~~~~~fD~V~~~~-----~~~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 175 DISGATEDIKSLTFDAVALDM-----LNPHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp CTTCCC-------EEEEEECS-----SSTTTTHHHHGGGEEEEEEEEEEESS
T ss_pred ChHHcccccCCCCeeEEEECC-----CCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 99875 34556799999854 33445789999999999999877653
No 161
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.70 E-value=4.6e-17 Score=114.82 Aligned_cols=117 Identities=17% Similarity=0.110 Sum_probs=94.1
Q ss_pred hCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC---CCCc
Q 027517 30 SGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF---SDCF 106 (222)
Q Consensus 30 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~ 106 (222)
++..++.+|||+|||. + .+|+|+.|++.++++.. .++.+.++|+.++++ ++++
T Consensus 8 ~g~~~g~~vL~~~~g~----------------v-~vD~s~~ml~~a~~~~~-------~~~~~~~~d~~~~~~~~~~~~~ 63 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS----------------S-PVEALKGLVDKLQALTG-------NEGRVSVENIKQLLQSAHKESS 63 (176)
T ss_dssp TTCCTTSEEEEEECTT----------------S-CHHHHHHHHHHHHHHTT-------TTSEEEEEEGGGGGGGCCCSSC
T ss_pred cCCCCCCEEEEecCCc----------------e-eeeCCHHHHHHHHHhcc-------cCcEEEEechhcCccccCCCCC
Confidence 4567899999999986 1 28999999999998753 358999999998776 6788
Q ss_pred eeEEEEcccccCc-ccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHh
Q 027517 107 FDAITMGYGLRNV-VDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIR 185 (222)
Q Consensus 107 ~D~v~~~~~l~~~-~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (222)
||+|+++.++||+ ++...++++++++|||||++++.++....... ..
T Consensus 64 fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~--------------------------------~~ 111 (176)
T 2ld4_A 64 FDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDN--------------------------------NS 111 (176)
T ss_dssp EEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCS--------------------------------SS
T ss_pred EeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEccccccccc--------------------------------cc
Confidence 9999999999999 89999999999999999999985432111000 01
Q ss_pred hcCCHHHHHHHHHHcCC
Q 027517 186 EFLTGKDLEKLALEIGF 202 (222)
Q Consensus 186 ~~~~~~~~~~~l~~~Gf 202 (222)
..++.+++.++++++||
T Consensus 112 ~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 112 KVKTASKLCSALTLSGL 128 (176)
T ss_dssp SSCCHHHHHHHHHHTTC
T ss_pred ccCCHHHHHHHHHHCCC
Confidence 13477899999999999
No 162
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.70 E-value=7.6e-17 Score=116.12 Aligned_cols=120 Identities=19% Similarity=0.181 Sum_probs=90.6
Q ss_pred HHHHHhhCC-CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC
Q 027517 24 RMAVSWSGA-KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF 102 (222)
Q Consensus 24 ~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 102 (222)
..+...+.. .++.+|||+|||+|.++..++... ..+|+++|+|+.+++.++++....+.. .++++++++|+.+...
T Consensus 42 ~~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~-~~~v~~~~~d~~~~~~ 118 (201)
T 2ift_A 42 ETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQ--AKKVTFLELDKTVANQLKKNLQTLKCS-SEQAEVINQSSLDFLK 118 (201)
T ss_dssp HHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCC-TTTEEEECSCHHHHTT
T ss_pred HHHHHHHHHhcCCCeEEEcCCccCHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHHhCCC-ccceEEEECCHHHHHH
Confidence 344444432 257799999999999999877652 358999999999999999987654320 0379999999877532
Q ss_pred --CCCc-eeEEEEcccccCcccHHHHHHHH--hcccCCCcEEEEEecCCC
Q 027517 103 --SDCF-FDAITMGYGLRNVVDKRKALEES--FRVLKPGSRISVLDFNKS 147 (222)
Q Consensus 103 --~~~~-~D~v~~~~~l~~~~~~~~~l~~~--~~~l~~gG~l~i~~~~~~ 147 (222)
++++ ||+|+++.+++ ..+...+++.+ .++|+|||.+++......
T Consensus 119 ~~~~~~~fD~I~~~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 119 QPQNQPHFDVVFLDPPFH-FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp SCCSSCCEEEEEECCCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred hhccCCCCCEEEECCCCC-CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 3568 99999988854 56677888888 678999999988765543
No 163
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.69 E-value=4.2e-16 Score=117.19 Aligned_cols=99 Identities=29% Similarity=0.437 Sum_probs=85.2
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
.++.+|||+|||+|.++..+++.+ ++.+++++|+++.+++.++++. .++.+...|+.++++++++||+|++
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~~fD~v~~ 154 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRY--------PQVTFCVASSHRLPFSDTSMDAIIR 154 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHC--------TTSEEEECCTTSCSBCTTCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhC--------CCcEEEEcchhhCCCCCCceeEEEE
Confidence 567899999999999999999875 4669999999999999998774 4789999999988877789999998
Q ss_pred cccccCcccHHHHHHHHhcccCCCcEEEEEecCCC
Q 027517 113 GYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKS 147 (222)
Q Consensus 113 ~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~ 147 (222)
..+.. .++++.++|||||.+++.++...
T Consensus 155 ~~~~~-------~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 155 IYAPC-------KAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp ESCCC-------CHHHHHHHEEEEEEEEEEEECTT
T ss_pred eCChh-------hHHHHHHhcCCCcEEEEEEcCHH
Confidence 76632 47889999999999999887654
No 164
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.69 E-value=1.5e-16 Score=123.67 Aligned_cols=117 Identities=17% Similarity=0.207 Sum_probs=95.5
Q ss_pred HHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC
Q 027517 22 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP 101 (222)
Q Consensus 22 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 101 (222)
..+.+++.+...++.+|||+|||+|.++..+++. .+..+++++|+|+.+++.++++....+ ..+.+...|+.+..
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~-~~~~~v~~vD~s~~~l~~a~~~~~~~~----~~~~~~~~d~~~~~ 258 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARH-SPKIRLTLCDVSAPAVEASRATLAANG----VEGEVFASNVFSEV 258 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHH-CTTCBCEEEESBHHHHHHHHHHHHHTT----CCCEEEECSTTTTC
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHhC----CCCEEEEccccccc
Confidence 4556666665556779999999999999999988 466799999999999999999876543 24677888887643
Q ss_pred CCCCceeEEEEcccccC-----cccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 102 FSDCFFDAITMGYGLRN-----VVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 102 ~~~~~~D~v~~~~~l~~-----~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
+++||+|+++.++|+ ..+...+++++.++|+|||.+++....
T Consensus 259 --~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 259 --KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp --CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred --cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 568999999999885 345688999999999999999987654
No 165
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.69 E-value=1.4e-16 Score=117.31 Aligned_cols=110 Identities=19% Similarity=0.293 Sum_probs=84.8
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhh---hhcCCCeeEEeCCCCC-cC--CCCCc
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVS---KACYKNIEWVEGDALD-LP--FSDCF 106 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~d~~~-~~--~~~~~ 106 (222)
.++.+|||||||+|.++..+++.. ++..++|+|+++.+++.|+++..... .....++.++++|+.+ ++ ++.++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred CCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 456689999999999999999874 66799999999999999987754321 1123689999999987 55 56788
Q ss_pred eeEEEEcccccCccc--------HHHHHHHHhcccCCCcEEEEEe
Q 027517 107 FDAITMGYGLRNVVD--------KRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 107 ~D~v~~~~~l~~~~~--------~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
||.|++++...+... ...+++++.++|||||.+++..
T Consensus 124 ~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 124 LTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp EEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 999998765433221 1478999999999999998864
No 166
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.69 E-value=8.1e-17 Score=113.66 Aligned_cols=121 Identities=12% Similarity=0.105 Sum_probs=91.6
Q ss_pred HHHHHHhhC-CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC-c
Q 027517 23 KRMAVSWSG-AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD-L 100 (222)
Q Consensus 23 ~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~-~ 100 (222)
...+...+. ..++.+|||+|||+|..+..+++. +..+++++|+++.+++.++++....+.. .++.++.+|+.+ +
T Consensus 19 ~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~ 94 (177)
T 2esr_A 19 RGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTKAE--NRFTLLKMEAERAI 94 (177)
T ss_dssp HHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTTCG--GGEEEECSCHHHHH
T ss_pred HHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCCC--CceEEEECcHHHhH
Confidence 345555554 557789999999999999998876 3458999999999999999987654321 368999999877 3
Q ss_pred CCCCCceeEEEEcccccCcccHHHHHHHHh--cccCCCcEEEEEecCCCC
Q 027517 101 PFSDCFFDAITMGYGLRNVVDKRKALEESF--RVLKPGSRISVLDFNKST 148 (222)
Q Consensus 101 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~--~~l~~gG~l~i~~~~~~~ 148 (222)
+...++||+|+++.+++ .......++.+. ++|+|||.+++.......
T Consensus 95 ~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 95 DCLTGRFDLVFLDPPYA-KETIVATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp HHBCSCEEEEEECCSSH-HHHHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred HhhcCCCCEEEECCCCC-cchHHHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 33345699999987653 234456677776 999999999987766543
No 167
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.68 E-value=1.4e-15 Score=115.03 Aligned_cols=120 Identities=16% Similarity=0.054 Sum_probs=88.5
Q ss_pred HHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeC-ChhHHHHHhcchh-----hhhhh--cCCCeeEE
Q 027517 22 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDF-SKNQLSMASSRQD-----LVSKA--CYKNIEWV 93 (222)
Q Consensus 22 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~~-----~~~~~--~~~~i~~~ 93 (222)
....+.......++.+|||+|||+|..+..+++. + ..+|+++|+ ++.+++.++++.. ..+.. ...++.+.
T Consensus 67 l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~-~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~ 144 (281)
T 3bzb_A 67 LADTLCWQPELIAGKTVCELGAGAGLVSIVAFLA-G-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVV 144 (281)
T ss_dssp HHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHT-T-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEE
T ss_pred HHHHHHhcchhcCCCeEEEecccccHHHHHHHHc-C-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEE
Confidence 3344444444456789999999999999988875 2 248999999 8999999998873 22110 00267787
Q ss_pred eCCCCCcC--C----CCCceeEEEEcccccCcccHHHHHHHHhcccC---C--CcEEEEEe
Q 027517 94 EGDALDLP--F----SDCFFDAITMGYGLRNVVDKRKALEESFRVLK---P--GSRISVLD 143 (222)
Q Consensus 94 ~~d~~~~~--~----~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~---~--gG~l~i~~ 143 (222)
..+..+.. . +.++||+|++..++++.++...+++.+.++|+ | ||.+++..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 145 PYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp ECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred EecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 66654421 1 34689999999999999999999999999999 9 99887653
No 168
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.68 E-value=2.7e-16 Score=121.47 Aligned_cols=117 Identities=23% Similarity=0.237 Sum_probs=92.7
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 99 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 99 (222)
..+.+.+.+.....++.+|||+|||+|.++..+++. ...+|+++|++ .+++.++++....+.. ++++++.+|+.+
T Consensus 24 ~~y~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~~vD~s-~~~~~a~~~~~~~~~~--~~i~~~~~d~~~ 98 (328)
T 1g6q_1 24 LSYRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKH--GAKHVIGVDMS-SIIEMAKELVELNGFS--DKITLLRGKLED 98 (328)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHT--CCSEEEEEESS-THHHHHHHHHHHTTCT--TTEEEEESCTTT
T ss_pred HHHHHHHHhhHhhcCCCEEEEecCccHHHHHHHHHC--CCCEEEEEChH-HHHHHHHHHHHHcCCC--CCEEEEECchhh
Confidence 445556655555567889999999999999988875 23489999999 5899998887654432 579999999999
Q ss_pred cCCCCCceeEEEEccc---ccCcccHHHHHHHHhcccCCCcEEEE
Q 027517 100 LPFSDCFFDAITMGYG---LRNVVDKRKALEESFRVLKPGSRISV 141 (222)
Q Consensus 100 ~~~~~~~~D~v~~~~~---l~~~~~~~~~l~~~~~~l~~gG~l~i 141 (222)
++++.++||+|++... +.+...+..++..+.++|+|||.++.
T Consensus 99 ~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 99 VHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp SCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 8777678999998754 44445678899999999999999973
No 169
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.68 E-value=3.1e-16 Score=117.85 Aligned_cols=153 Identities=13% Similarity=0.067 Sum_probs=98.1
Q ss_pred HHHhhCC-CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEE-eCCCCCcC--
Q 027517 26 AVSWSGA-KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWV-EGDALDLP-- 101 (222)
Q Consensus 26 ~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~d~~~~~-- 101 (222)
+++.+.. .++.+|||+|||||.++..+++. ...+|+++|+++.|++.+.+.. +++... ..|+..++
T Consensus 76 ~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~--ga~~V~aVDvs~~mL~~a~r~~--------~rv~~~~~~ni~~l~~~ 145 (291)
T 3hp7_A 76 ALAVFNLSVEDMITIDIGASTGGFTDVMLQN--GAKLVYAVDVGTNQLVWKLRQD--------DRVRSMEQYNFRYAEPV 145 (291)
T ss_dssp HHHHTTCCCTTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSSSCSCHHHHTC--------TTEEEECSCCGGGCCGG
T ss_pred HHHhcCCCccccEEEecCCCccHHHHHHHhC--CCCEEEEEECCHHHHHHHHHhC--------cccceecccCceecchh
Confidence 3344443 35679999999999999988876 2358999999999998854432 233322 23443322
Q ss_pred -CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHh
Q 027517 102 -FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYL 180 (222)
Q Consensus 102 -~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (222)
++..+||+|++..+++++ ..++.+++++|+|||.+++.... . +..-..... ..+.+..
T Consensus 146 ~l~~~~fD~v~~d~sf~sl---~~vL~e~~rvLkpGG~lv~lvkP--q---fe~~~~~~~------~~G~vrd------- 204 (291)
T 3hp7_A 146 DFTEGLPSFASIDVSFISL---NLILPALAKILVDGGQVVALVKP--Q---FEAGREQIG------KNGIVRE------- 204 (291)
T ss_dssp GCTTCCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEECG--G---GTSCGGGCC-------CCCCCC-------
T ss_pred hCCCCCCCEEEEEeeHhhH---HHHHHHHHHHcCcCCEEEEEECc--c---cccChhhcC------CCCccCC-------
Confidence 233459999998887755 67899999999999999886211 1 000000000 0000000
Q ss_pred HHhHhhcCCHHHHHHHHHHcCCeEEEEeeec
Q 027517 181 KSSIREFLTGKDLEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 181 ~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 211 (222)
...+..+.+++.++++++||.+......+
T Consensus 205 --~~~~~~~~~~v~~~~~~~Gf~v~~~~~sp 233 (291)
T 3hp7_A 205 --SSIHEKVLETVTAFAVDYGFSVKGLDFSP 233 (291)
T ss_dssp --HHHHHHHHHHHHHHHHHTTEEEEEEEECS
T ss_pred --HHHHHHHHHHHHHHHHHCCCEEEEEEECC
Confidence 11233467899999999999988766543
No 170
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.68 E-value=4.3e-16 Score=114.56 Aligned_cols=112 Identities=18% Similarity=0.177 Sum_probs=91.8
Q ss_pred HHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc
Q 027517 21 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL 100 (222)
Q Consensus 21 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 100 (222)
.....+.+.+...++.+|||+|||+|..+..+++.. .+++++|+++.+++.++++.... .++.+..+|+.+.
T Consensus 57 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~-----~~v~~~~~d~~~~ 128 (231)
T 1vbf_A 57 NLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYY-----NNIKLILGDGTLG 128 (231)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTC-----SSEEEEESCGGGC
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhc-----CCeEEEECCcccc
Confidence 334566667777888999999999999999999873 68999999999999999887433 2789999998873
Q ss_pred CCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCC
Q 027517 101 PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 101 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
....++||+|++..+++++++ ++.+.|+|||++++.....
T Consensus 129 ~~~~~~fD~v~~~~~~~~~~~------~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 129 YEEEKPYDRVVVWATAPTLLC------KPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CGGGCCEEEEEESSBBSSCCH------HHHHTEEEEEEEEEEECSS
T ss_pred cccCCCccEEEECCcHHHHHH------HHHHHcCCCcEEEEEEcCC
Confidence 223468999999999998864 5888999999999887654
No 171
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.68 E-value=3.1e-16 Score=110.48 Aligned_cols=102 Identities=24% Similarity=0.319 Sum_probs=85.6
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC--------CC
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP--------FS 103 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--------~~ 103 (222)
..++.+|||+|||+|..+..+++.++++.+++++|+++ +++. .++.+.+.|+.+.+ ++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-------------~~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-------------VGVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-------------TTEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-------------CcEEEEEcccccchhhhhhhccCC
Confidence 56788999999999999999998876667999999998 5421 47899999998865 56
Q ss_pred CCceeEEEEcccccCcccH-----------HHHHHHHhcccCCCcEEEEEecCCC
Q 027517 104 DCFFDAITMGYGLRNVVDK-----------RKALEESFRVLKPGSRISVLDFNKS 147 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~~~~-----------~~~l~~~~~~l~~gG~l~i~~~~~~ 147 (222)
+++||+|+++.++++.... ..+++++.++|+|||.+++..+...
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE 140 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 6789999999988877654 6889999999999999998776543
No 172
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.68 E-value=6.8e-16 Score=120.13 Aligned_cols=117 Identities=19% Similarity=0.175 Sum_probs=93.9
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 99 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 99 (222)
..+.+.+...+...++.+|||+|||+|.++..+++. ...+|+++|+++ +++.++++....+.. ++++++.+|+.+
T Consensus 36 ~~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~l~--~~v~~~~~d~~~ 110 (348)
T 2y1w_A 36 GTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLT--DRIVVIPGKVEE 110 (348)
T ss_dssp HHHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCT--TTEEEEESCTTT
T ss_pred HHHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhC--CCCEEEEECCHH-HHHHHHHHHHHcCCC--CcEEEEEcchhh
Confidence 445566666666678889999999999999988875 345899999996 888888876544322 579999999998
Q ss_pred cCCCCCceeEEEEcccccCcc--cHHHHHHHHhcccCCCcEEEEE
Q 027517 100 LPFSDCFFDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 100 ~~~~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~l~~gG~l~i~ 142 (222)
++.+ ++||+|++...++|+. +....+.+++++|+|||.+++.
T Consensus 111 ~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 111 VSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred CCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 7655 5799999998887773 4567888999999999999854
No 173
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.68 E-value=2.4e-16 Score=112.06 Aligned_cols=124 Identities=17% Similarity=0.115 Sum_probs=93.7
Q ss_pred hHHHHHHHHhhC-CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCC
Q 027517 20 RIWKRMAVSWSG-AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 98 (222)
Q Consensus 20 ~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~ 98 (222)
..+...+...+. ..++.+|||+|||+|..+..+++. ...+++++|+++.+++.++++....+.. ++++++++|+.
T Consensus 29 ~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~~~~~~~d~~ 104 (187)
T 2fhp_A 29 DKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSR--GMDKSICIEKNFAALKVIKENIAITKEP--EKFEVRKMDAN 104 (187)
T ss_dssp HHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHTCG--GGEEEEESCHH
T ss_pred HHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHhCCC--cceEEEECcHH
Confidence 344455566553 357789999999999999988874 3468999999999999999987654321 47999999987
Q ss_pred CcC----CCCCceeEEEEcccccCcccHHHHHHHH--hcccCCCcEEEEEecCCCC
Q 027517 99 DLP----FSDCFFDAITMGYGLRNVVDKRKALEES--FRVLKPGSRISVLDFNKST 148 (222)
Q Consensus 99 ~~~----~~~~~~D~v~~~~~l~~~~~~~~~l~~~--~~~l~~gG~l~i~~~~~~~ 148 (222)
+.. ...++||+|+++.+++ ..+....++.+ .++|+|||.+++.......
T Consensus 105 ~~~~~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 105 RALEQFYEEKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp HHHHHHHHTTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred HHHHHHHhcCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCccc
Confidence 732 1256899999988754 34556677777 8899999999887665533
No 174
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.68 E-value=8.4e-16 Score=112.66 Aligned_cols=117 Identities=26% Similarity=0.281 Sum_probs=91.9
Q ss_pred HHHHHhhC--CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhh--hcCCCeeEEeCCCCC
Q 027517 24 RMAVSWSG--AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK--ACYKNIEWVEGDALD 99 (222)
Q Consensus 24 ~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~d~~~ 99 (222)
..+++.+. ..++.+|||+|||+|..+..+++..++..+++++|+++.+++.++++....+. ....++.+.+.|+..
T Consensus 65 ~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 144 (226)
T 1i1n_A 65 AYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM 144 (226)
T ss_dssp HHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG
T ss_pred HHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCccc
Confidence 34445553 66788999999999999999998875557999999999999999988754321 012589999999886
Q ss_pred cCCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCC
Q 027517 100 LPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 100 ~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
.....++||+|++...++++. +++.+.|||||++++.....
T Consensus 145 ~~~~~~~fD~i~~~~~~~~~~------~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 145 GYAEEAPYDAIHVGAAAPVVP------QALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp CCGGGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEESCT
T ss_pred CcccCCCcCEEEECCchHHHH------HHHHHhcCCCcEEEEEEecC
Confidence 544456799999998887764 47889999999999876543
No 175
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.67 E-value=1.6e-15 Score=115.00 Aligned_cols=110 Identities=14% Similarity=0.102 Sum_probs=82.6
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhh--hcCCCeeEEeCCCCCc-CCCCCceeE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK--ACYKNIEWVEGDALDL-PFSDCFFDA 109 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~d~~~~-~~~~~~~D~ 109 (222)
+++.+|||||||+|..+..+++. .+..+++++|+++.+++.+++++..... ...++++++.+|+.+. ....++||+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRH-KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTC-TTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccE
Confidence 45679999999999999999986 3456899999999999999998754321 0125899999998774 334578999
Q ss_pred EEEcccccCccc----HHHHHHHHhcccCCCcEEEEEe
Q 027517 110 ITMGYGLRNVVD----KRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 110 v~~~~~l~~~~~----~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
|++.......+. ...+++.+++.|+|||++++..
T Consensus 161 Ii~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 999655332222 1678999999999999998864
No 176
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.67 E-value=6.6e-16 Score=122.18 Aligned_cols=123 Identities=19% Similarity=0.175 Sum_probs=93.2
Q ss_pred HHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHH-------hcchhhhhhhcCCCeeEEe
Q 027517 22 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMA-------SSRQDLVSKACYKNIEWVE 94 (222)
Q Consensus 22 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~-------~~~~~~~~~~~~~~i~~~~ 94 (222)
+...+++.+...++.+|||+|||+|..+..+++..+ ..+|+|+|+++.+++.| ++++...+.. ..++.+++
T Consensus 230 ~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~-~~nV~~i~ 307 (433)
T 1u2z_A 230 FLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMR-LNNVEFSL 307 (433)
T ss_dssp HHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC-CCCEEEEE
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC-CCceEEEE
Confidence 345566667778889999999999999999998763 34899999999999988 6665433210 15889988
Q ss_pred CCCCCc--CC--CCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCC
Q 027517 95 GDALDL--PF--SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKS 147 (222)
Q Consensus 95 ~d~~~~--~~--~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~ 147 (222)
+|.... ++ ..++||+|+++..+ +.++....++++.+.|||||++++.+...+
T Consensus 308 gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~f~p 363 (433)
T 1u2z_A 308 KKSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKSLRS 363 (433)
T ss_dssp SSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSCSSC
T ss_pred cCccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeeccCC
Confidence 764421 11 23679999998766 347788889999999999999998765443
No 177
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.67 E-value=2.6e-16 Score=114.87 Aligned_cols=106 Identities=8% Similarity=0.177 Sum_probs=86.2
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC--CCCCceeEEE
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP--FSDCFFDAIT 111 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~D~v~ 111 (222)
++.+|||+|||+|..+..+++.++++++++++|+++++++.+++++...+.. ..+++++++|+.+.. .++++||+|+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~-~~~i~~~~gda~~~l~~~~~~~fD~V~ 134 (221)
T 3dr5_A 56 GSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYS-PSRVRFLLSRPLDVMSRLANDSYQLVF 134 (221)
T ss_dssp TCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCC-GGGEEEECSCHHHHGGGSCTTCEEEEE
T ss_pred CCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cCcEEEEEcCHHHHHHHhcCCCcCeEE
Confidence 3459999999999999999998766789999999999999999988654421 037999999987642 3357899999
Q ss_pred EcccccCcccHHHHHHHHhcccCCCcEEEEEe
Q 027517 112 MGYGLRNVVDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 112 ~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
+... ..+....++.+.+.|+|||.+++.+
T Consensus 135 ~d~~---~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 135 GQVS---PMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp ECCC---TTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred EcCc---HHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 8764 3455678999999999999998844
No 178
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.67 E-value=4.4e-18 Score=126.03 Aligned_cols=103 Identities=19% Similarity=0.211 Sum_probs=87.8
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++....+.. .++.++++|+.+++ +.++||+|++
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~-~~~~~D~v~~ 150 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIA--DKIEFICGDFLLLA-SFLKADVVFL 150 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCG--GGEEEEESCHHHHG-GGCCCSEEEE
T ss_pred cCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC--cCeEEEECChHHhc-ccCCCCEEEE
Confidence 36789999999999999999976 369999999999999999987654421 37999999998876 4568999999
Q ss_pred cccccCcccHHHHHHHHhcccCCCcEEEE
Q 027517 113 GYGLRNVVDKRKALEESFRVLKPGSRISV 141 (222)
Q Consensus 113 ~~~l~~~~~~~~~l~~~~~~l~~gG~l~i 141 (222)
+.++++..+....+.+++++|+|||.+++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 151 SPPWGGPDYATAETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp CCCCSSGGGGGSSSBCTTTSCSSCHHHHH
T ss_pred CCCcCCcchhhhHHHHHHhhcCCcceeHH
Confidence 99999988776678889999999998654
No 179
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.67 E-value=3.3e-16 Score=114.60 Aligned_cols=112 Identities=21% Similarity=0.237 Sum_probs=88.9
Q ss_pred hhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-C-C--C-
Q 027517 29 WSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-P-F--S- 103 (222)
Q Consensus 29 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~-~--~- 103 (222)
+....++.+|||+|||+|..+..+++.++++.+++++|+++.+++.+++++...+.. +++.++++|+.+. + . .
T Consensus 53 l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~ 130 (223)
T 3duw_A 53 LVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLN--DRVEVRTGLALDSLQQIENEK 130 (223)
T ss_dssp HHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEESCHHHHHHHHHHTT
T ss_pred HHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEEcCHHHHHHHHHhcC
Confidence 334456789999999999999999988754779999999999999999988654432 4699999998763 1 1 1
Q ss_pred CCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 104 DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
.++||+|++... .+....+++.+.+.|+|||.+++.+..
T Consensus 131 ~~~fD~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 131 YEPFDFIFIDAD---KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp CCCCSEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred CCCcCEEEEcCC---cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 156999998765 345678899999999999998876544
No 180
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.67 E-value=2.8e-16 Score=115.66 Aligned_cols=116 Identities=15% Similarity=0.163 Sum_probs=91.7
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-C-
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-P- 101 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~- 101 (222)
..+...+...++.+|||+|||+|..+..+++.. +..+++++|+++.+++.+++++...+.. +++.++++|+.+. +
T Consensus 61 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~ 137 (232)
T 3ntv_A 61 DLIKQLIRMNNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHFE--NQVRIIEGNALEQFEN 137 (232)
T ss_dssp HHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTCT--TTEEEEESCGGGCHHH
T ss_pred HHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEECCHHHHHHh
Confidence 334444445577899999999999999999853 5779999999999999999988655432 4899999999774 3
Q ss_pred CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 102 FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 102 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
...++||+|++... ..+...+++.+.+.|+|||++++.+..
T Consensus 138 ~~~~~fD~V~~~~~---~~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 138 VNDKVYDMIFIDAA---KAQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp HTTSCEEEEEEETT---SSSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred hccCCccEEEEcCc---HHHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 22578999998754 455678999999999999999885443
No 181
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.67 E-value=2.9e-16 Score=113.13 Aligned_cols=117 Identities=13% Similarity=0.090 Sum_probs=89.6
Q ss_pred HHHHHHhhCCC-CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC-c
Q 027517 23 KRMAVSWSGAK-TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD-L 100 (222)
Q Consensus 23 ~~~~~~~~~~~-~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~-~ 100 (222)
...+.+.+... ++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.++++....+. .+++++++|+.+ +
T Consensus 42 ~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~~---~~v~~~~~D~~~~~ 116 (202)
T 2fpo_A 42 RETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLKA---GNARVVNSNAMSFL 116 (202)
T ss_dssp HHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTC---CSEEEECSCHHHHH
T ss_pred HHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEECCHHHHH
Confidence 33444444332 57799999999999999877652 24899999999999999998765432 489999999877 4
Q ss_pred CCCCCceeEEEEcccccCcccHHHHHHHHhc--ccCCCcEEEEEecC
Q 027517 101 PFSDCFFDAITMGYGLRNVVDKRKALEESFR--VLKPGSRISVLDFN 145 (222)
Q Consensus 101 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~--~l~~gG~l~i~~~~ 145 (222)
+...++||+|++...++ ......+++.+.+ +|+|||.+++....
T Consensus 117 ~~~~~~fD~V~~~~p~~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 117 AQKGTPHNIVFVDPPFR-RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp SSCCCCEEEEEECCSSS-TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred hhcCCCCCEEEECCCCC-CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 44556899999987754 4566778888865 59999999887654
No 182
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.67 E-value=2.6e-15 Score=117.84 Aligned_cols=148 Identities=22% Similarity=0.246 Sum_probs=111.6
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 99 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 99 (222)
......++... ..++.+|||+|||+|.++..++... +..+++|+|+++.+++.|+++....+.. .++++.++|+.+
T Consensus 204 ~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~~~l~~A~~n~~~~gl~--~~i~~~~~D~~~ 279 (373)
T 3tm4_A 204 ASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYRKHLIGAEMNALAAGVL--DKIKFIQGDATQ 279 (373)
T ss_dssp HHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCHHHHHHHHHHHHHTTCG--GGCEEEECCGGG
T ss_pred HHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHHcCCC--CceEEEECChhh
Confidence 33445555555 6788899999999999999998873 4458999999999999999998665432 479999999999
Q ss_pred cCCCCCceeEEEEcccccCcc-------c-HHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccC
Q 027517 100 LPFSDCFFDAITMGYGLRNVV-------D-KRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGY 171 (222)
Q Consensus 100 ~~~~~~~~D~v~~~~~l~~~~-------~-~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (222)
++.+.++||+|+++..+.... + ...+++.++++| +|.+++..
T Consensus 280 ~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~---------------------------- 329 (373)
T 3tm4_A 280 LSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFIT---------------------------- 329 (373)
T ss_dssp GGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEE----------------------------
T ss_pred CCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEE----------------------------
Confidence 887767899999987755331 1 266788888888 55554432
Q ss_pred ChhHHHHHhHHhHhhcCCHHHHHHHHHHcCCeEEEEeeecCCeeee
Q 027517 172 GLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGN 217 (222)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~ 217 (222)
.+.+.+++.+++.||+..+......|...+
T Consensus 330 ----------------~~~~~~~~~~~~~G~~~~~~~~~~nG~l~~ 359 (373)
T 3tm4_A 330 ----------------TEKKAIEEAIAENGFEIIHHRVIGHGGLMV 359 (373)
T ss_dssp ----------------SCHHHHHHHHHHTTEEEEEEEEEEETTEEE
T ss_pred ----------------CCHHHHHHHHHHcCCEEEEEEEEEcCCEEE
Confidence 134577788999999999888887665443
No 183
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.67 E-value=3.6e-17 Score=121.04 Aligned_cols=114 Identities=18% Similarity=0.154 Sum_probs=91.5
Q ss_pred HhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-CC---
Q 027517 28 SWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-FS--- 103 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~--- 103 (222)
......++.+|||+|||+|..+..+++.++++++|+++|+++++++.+++++...+.. .+++++++|+.+.. ..
T Consensus 54 ~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~--~~i~~~~gda~~~l~~~~~~ 131 (242)
T 3r3h_A 54 MLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQE--HKIKLRLGPALDTLHSLLNE 131 (242)
T ss_dssp HHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCT--TTEEEEESCHHHHHHHHHHH
T ss_pred HHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEEcCHHHHHHHHhhc
Confidence 3334456779999999999999999998755789999999999999999988655432 58999999987642 11
Q ss_pred --CCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCC
Q 027517 104 --DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 104 --~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
.++||+|++... ..+....++.+.++|+|||.+++.+...
T Consensus 132 ~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 173 (242)
T 3r3h_A 132 GGEHQFDFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIFW 173 (242)
T ss_dssp HCSSCEEEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSSS
T ss_pred cCCCCEeEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCcc
Confidence 368999998764 4456778999999999999999876553
No 184
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.66 E-value=3.8e-16 Score=115.03 Aligned_cols=117 Identities=14% Similarity=0.195 Sum_probs=93.3
Q ss_pred HHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-C
Q 027517 23 KRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-P 101 (222)
Q Consensus 23 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~ 101 (222)
...+...+...++.+|||+|||+|..+..+++.+ ++.+++++|+++.+++.+++++...+.. .++.+..+|+.+. +
T Consensus 43 ~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~ 119 (233)
T 2gpy_A 43 MESLLHLLKMAAPARILEIGTAIGYSAIRMAQAL-PEATIVSIERDERRYEEAHKHVKALGLE--SRIELLFGDALQLGE 119 (233)
T ss_dssp HHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHC-TTCEEEEECCCHHHHHHHHHHHHHTTCT--TTEEEECSCGGGSHH
T ss_pred HHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEECCHHHHHH
Confidence 3444455555677899999999999999999985 4679999999999999999987654422 4799999998773 3
Q ss_pred CC--CCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 102 FS--DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 102 ~~--~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
.. +++||+|++....+ +...+++.+.+.|+|||.+++.+..
T Consensus 120 ~~~~~~~fD~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 120 KLELYPLFDVLFIDAAKG---QYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp HHTTSCCEEEEEEEGGGS---CHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred hcccCCCccEEEECCCHH---HHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 22 46799999977643 6688999999999999999887543
No 185
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.66 E-value=8.9e-16 Score=112.58 Aligned_cols=116 Identities=18% Similarity=0.228 Sum_probs=91.5
Q ss_pred HHHHHhh--CCCCCCeEEEecCCCChhHHHHHHHhC----CCCcEEEEeCChhHHHHHhcchhhhhh--hcCCCeeEEeC
Q 027517 24 RMAVSWS--GAKTGDNVLDVCCGSGDLSFLLSEQVG----SQGKVIGLDFSKNQLSMASSRQDLVSK--ACYKNIEWVEG 95 (222)
Q Consensus 24 ~~~~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~ 95 (222)
..+++.+ ...++.+|||+|||+|..+..+++..+ +..+++++|+++.+++.++++....+. ....++.+..+
T Consensus 68 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 147 (227)
T 2pbf_A 68 ALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHK 147 (227)
T ss_dssp HHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEEC
T ss_pred HHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEEC
Confidence 4445555 467788999999999999999998864 456999999999999999988765431 00258999999
Q ss_pred CCCCcC----CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 96 DALDLP----FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 96 d~~~~~----~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
|+.+.. ...++||+|++...++++. +.+.+.|+|||++++....
T Consensus 148 d~~~~~~~~~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 148 NIYQVNEEEKKELGLFDAIHVGASASELP------EILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CGGGCCHHHHHHHCCEEEEEECSBBSSCC------HHHHHHEEEEEEEEEEEEE
T ss_pred ChHhcccccCccCCCcCEEEECCchHHHH------HHHHHhcCCCcEEEEEEcc
Confidence 988754 3446799999999888764 6788999999999887654
No 186
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.65 E-value=1.5e-15 Score=112.06 Aligned_cols=114 Identities=22% Similarity=0.260 Sum_probs=91.8
Q ss_pred HHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC
Q 027517 22 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP 101 (222)
Q Consensus 22 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 101 (222)
....+.+.+...++.+|||+|||+|.++..+++..+ .+++++|+++.+++.++++....+. .++.+..+|... +
T Consensus 79 ~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~---~~v~~~~~d~~~-~ 152 (235)
T 1jg1_A 79 MVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGV---KNVHVILGDGSK-G 152 (235)
T ss_dssp HHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTC---CSEEEEESCGGG-C
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCC---CCcEEEECCccc-C
Confidence 445566677778889999999999999999999863 6999999999999999998765432 468999999732 3
Q ss_pred CCC-CceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCC
Q 027517 102 FSD-CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKS 147 (222)
Q Consensus 102 ~~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~ 147 (222)
++. .+||+|++..+++++++ ++.+.|+|||++++......
T Consensus 153 ~~~~~~fD~Ii~~~~~~~~~~------~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 153 FPPKAPYDVIIVTAGAPKIPE------PLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp CGGGCCEEEEEECSBBSSCCH------HHHHTEEEEEEEEEEECSSS
T ss_pred CCCCCCccEEEECCcHHHHHH------HHHHhcCCCcEEEEEEecCC
Confidence 332 35999999999988864 67889999999998776543
No 187
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.65 E-value=4.4e-16 Score=114.77 Aligned_cols=101 Identities=17% Similarity=0.250 Sum_probs=81.6
Q ss_pred CCCCeEEEecCCCChhHHHHHHH---hCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc---CCC-CC
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQ---VGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL---PFS-DC 105 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~---~~~-~~ 105 (222)
.++.+|||||||+|..+..+++. +.++.+|+++|+++.+++.++.. . .+++++++|+.+. +.. ..
T Consensus 80 ~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~----~----~~v~~~~gD~~~~~~l~~~~~~ 151 (236)
T 2bm8_A 80 LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD----M----ENITLHQGDCSDLTTFEHLREM 151 (236)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG----C----TTEEEEECCSSCSGGGGGGSSS
T ss_pred cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc----C----CceEEEECcchhHHHHHhhccC
Confidence 35679999999999999999887 35677999999999998887621 1 5899999999874 432 33
Q ss_pred ceeEEEEcccccCcccHHHHHHHHhc-ccCCCcEEEEEec
Q 027517 106 FFDAITMGYGLRNVVDKRKALEESFR-VLKPGSRISVLDF 144 (222)
Q Consensus 106 ~~D~v~~~~~l~~~~~~~~~l~~~~~-~l~~gG~l~i~~~ 144 (222)
+||+|++... | .+...++.++.+ .|||||++++.+.
T Consensus 152 ~fD~I~~d~~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 152 AHPLIFIDNA--H-ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp CSSEEEEESS--C-SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred CCCEEEECCc--h-HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 7999998765 3 367889999997 9999999998654
No 188
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.65 E-value=5.2e-16 Score=112.54 Aligned_cols=107 Identities=18% Similarity=0.179 Sum_probs=87.1
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-CCCCCceeEEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-PFSDCFFDAIT 111 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~v~ 111 (222)
.++.+|||+|||+|..+..+++.++++.+++++|+++.+++.++++....+.. ++++++++|+.+. +..++ ||+|+
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~-fD~v~ 131 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLI--DRVELQVGDPLGIAAGQRD-IDILF 131 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGG--GGEEEEESCHHHHHTTCCS-EEEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC--ceEEEEEecHHHHhccCCC-CCEEE
Confidence 45679999999999999999988644679999999999999999887654432 4799999998763 43345 99999
Q ss_pred EcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 112 MGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 112 ~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
+... ..+...+++++.++|+|||.+++.+..
T Consensus 132 ~~~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~ 162 (210)
T 3c3p_A 132 MDCD---VFNGADVLERMNRCLAKNALLIAVNAL 162 (210)
T ss_dssp EETT---TSCHHHHHHHHGGGEEEEEEEEEESSS
T ss_pred EcCC---hhhhHHHHHHHHHhcCCCeEEEEECcc
Confidence 8743 456788999999999999999886544
No 189
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.65 E-value=2.5e-16 Score=115.38 Aligned_cols=110 Identities=17% Similarity=0.202 Sum_probs=88.5
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-C-CCC----
Q 027517 31 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-P-FSD---- 104 (222)
Q Consensus 31 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~-~~~---- 104 (222)
...++.+|||+|||+|..+..+++.++++.+++++|+++.+++.+++++...+.. ++++++++|+.+. + ...
T Consensus 61 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~ 138 (225)
T 3tr6_A 61 KLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLS--DKIGLRLSPAKDTLAELIHAGQA 138 (225)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEESCHHHHHHHHHTTTCT
T ss_pred HhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCC--CceEEEeCCHHHHHHHhhhccCC
Confidence 3456779999999999999999988654779999999999999999988655432 4699999998653 1 111
Q ss_pred CceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 105 CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 105 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
++||+|++... ..+...+++.+.++|+|||.+++.+..
T Consensus 139 ~~fD~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 139 WQYDLIYIDAD---KANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp TCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred CCccEEEECCC---HHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 68999997653 345688999999999999999987654
No 190
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.64 E-value=1.5e-15 Score=111.41 Aligned_cols=117 Identities=20% Similarity=0.293 Sum_probs=90.9
Q ss_pred HHHHHHHhh--CCCCCCeEEEecCCCChhHHHHHHHhCC-----CCcEEEEeCChhHHHHHhcchhhhhh--hcCCCeeE
Q 027517 22 WKRMAVSWS--GAKTGDNVLDVCCGSGDLSFLLSEQVGS-----QGKVIGLDFSKNQLSMASSRQDLVSK--ACYKNIEW 92 (222)
Q Consensus 22 ~~~~~~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~ 92 (222)
+...+++.+ ...++.+|||+|||+|..+..+++..+. ..+++++|+++++++.++++....+. ....++.+
T Consensus 70 ~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 149 (227)
T 1r18_A 70 MHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLI 149 (227)
T ss_dssp HHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEE
T ss_pred HHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEE
Confidence 334455555 4677889999999999999999987532 25899999999999999988765430 00158999
Q ss_pred EeCCCCCcCCCC-CceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 93 VEGDALDLPFSD-CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 93 ~~~d~~~~~~~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
..+|..+ +++. ++||+|++..++++++ +++.+.|||||++++....
T Consensus 150 ~~~d~~~-~~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 150 VEGDGRK-GYPPNAPYNAIHVGAAAPDTP------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EESCGGG-CCGGGCSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred EECCccc-CCCcCCCccEEEECCchHHHH------HHHHHHhcCCCEEEEEEec
Confidence 9999887 3333 6799999999998875 5788999999999887654
No 191
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.64 E-value=2.4e-16 Score=110.47 Aligned_cols=119 Identities=10% Similarity=0.065 Sum_probs=89.6
Q ss_pred HHHHHHHHhhCC--CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCC
Q 027517 21 IWKRMAVSWSGA--KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 98 (222)
Q Consensus 21 ~~~~~~~~~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~ 98 (222)
.....+...+.. +++.+|||+|||+|..+..+++. +.+++++|+++.+++.++++....+ .++++.++|+.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~d~~ 98 (171)
T 1ws6_A 26 RLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASE---GWEAVLVEKDPEAVRLLKENVRRTG----LGARVVALPVE 98 (171)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHT---TCEEEEECCCHHHHHHHHHHHHHHT----CCCEEECSCHH
T ss_pred HHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHC---CCeEEEEeCCHHHHHHHHHHHHHcC----CceEEEeccHH
Confidence 333444444432 26789999999999999999876 2359999999999999999876543 27899999987
Q ss_pred Cc-C-C--CCCceeEEEEcccccCcccHHHHHHHHh--cccCCCcEEEEEecCCCC
Q 027517 99 DL-P-F--SDCFFDAITMGYGLRNVVDKRKALEESF--RVLKPGSRISVLDFNKST 148 (222)
Q Consensus 99 ~~-~-~--~~~~~D~v~~~~~l~~~~~~~~~l~~~~--~~l~~gG~l~i~~~~~~~ 148 (222)
+. + . ..++||+|+++.+++ .+....++.+. ++|+|||.+++.......
T Consensus 99 ~~~~~~~~~~~~~D~i~~~~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 99 VFLPEAKAQGERFTVAFMAPPYA--MDLAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp HHHHHHHHTTCCEEEEEECCCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred HHHHhhhccCCceEEEEECCCCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 63 2 1 124799999998775 44556666676 999999999987766544
No 192
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.64 E-value=1.9e-15 Score=113.89 Aligned_cols=118 Identities=15% Similarity=0.259 Sum_probs=93.0
Q ss_pred HHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC---
Q 027517 26 AVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF--- 102 (222)
Q Consensus 26 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--- 102 (222)
+...+...++.+|||+|||+|..+..+++.++...+++++|+++.+++.++++....+. .++.+++.|+.+++.
T Consensus 75 ~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~---~~v~~~~~D~~~~~~~~~ 151 (274)
T 3ajd_A 75 PPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV---LNTIIINADMRKYKDYLL 151 (274)
T ss_dssp HHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEESCHHHHHHHHH
T ss_pred HHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC---CcEEEEeCChHhcchhhh
Confidence 34455667889999999999999999998764447999999999999999998866543 489999999887643
Q ss_pred -CCCceeEEEEcccccCc------------------ccHHHHHHHHhcccCCCcEEEEEecCC
Q 027517 103 -SDCFFDAITMGYGLRNV------------------VDKRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 103 -~~~~~D~v~~~~~l~~~------------------~~~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
..++||+|++....... .....+++++.+.|||||++++.+.+.
T Consensus 152 ~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 152 KNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp HTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 24679999987433211 345788999999999999998876554
No 193
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.64 E-value=3.8e-16 Score=121.21 Aligned_cols=99 Identities=21% Similarity=0.244 Sum_probs=82.1
Q ss_pred CCCeEEEecCC------CChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCC----
Q 027517 34 TGDNVLDVCCG------SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS---- 103 (222)
Q Consensus 34 ~~~~vLdiG~G------~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---- 103 (222)
++.+||||||| +|..+..+++.+.++++|+++|+|+.+. . . .++++++++|+.++++.
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---~-~--------~~rI~fv~GDa~dlpf~~~l~ 283 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---V-D--------ELRIRTIQGDQNDAEFLDRIA 283 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---G-C--------BTTEEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---h-c--------CCCcEEEEecccccchhhhhh
Confidence 45799999999 7777777777655678999999999972 1 1 15899999999987655
Q ss_pred --CCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 104 --DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 104 --~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
.++||+|++.. .|++++....+++++++|||||++++.++.
T Consensus 284 ~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 284 RRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp HHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred cccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 57899999875 467788899999999999999999998776
No 194
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.64 E-value=8.7e-16 Score=114.31 Aligned_cols=111 Identities=21% Similarity=0.208 Sum_probs=84.3
Q ss_pred CCCCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCChhHHHHHhcchhhh---hhhcCCC-------------------
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLV---SKACYKN------------------- 89 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~---~~~~~~~------------------- 89 (222)
.++.+|||+|||+|.++..+++.+ .+..+++++|+|+.+++.++++.... +.. .+
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 127 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLT--ARELERREQSERFGKPSYLEA 127 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHH--HHHHHHHHHHHHHCCHHHHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhcccc--ccchhhhhhhhhcccccchhh
Confidence 356799999999999999998762 13458999999999999999776543 211 11
Q ss_pred ------ee-------------EEeCCCCCcCC-----CCCceeEEEEcccccCccc---------HHHHHHHHhcccCCC
Q 027517 90 ------IE-------------WVEGDALDLPF-----SDCFFDAITMGYGLRNVVD---------KRKALEESFRVLKPG 136 (222)
Q Consensus 90 ------i~-------------~~~~d~~~~~~-----~~~~~D~v~~~~~l~~~~~---------~~~~l~~~~~~l~~g 136 (222)
+. +.++|+.+... ...+||+|+++.++.+..+ ...+++++.++|+||
T Consensus 128 ~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 207 (250)
T 1o9g_A 128 AQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAH 207 (250)
T ss_dssp HHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTT
T ss_pred hhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCC
Confidence 56 89999887431 3347999999877665432 458899999999999
Q ss_pred cEEEEEecC
Q 027517 137 SRISVLDFN 145 (222)
Q Consensus 137 G~l~i~~~~ 145 (222)
|+++++...
T Consensus 208 G~l~~~~~~ 216 (250)
T 1o9g_A 208 AVIAVTDRS 216 (250)
T ss_dssp CEEEEEESS
T ss_pred cEEEEeCcc
Confidence 999985443
No 195
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.63 E-value=3.2e-15 Score=110.98 Aligned_cols=110 Identities=20% Similarity=0.339 Sum_probs=84.4
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhh-----cCCCeeEEeCCCCC-cC--CCC
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA-----CYKNIEWVEGDALD-LP--FSD 104 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-----~~~~i~~~~~d~~~-~~--~~~ 104 (222)
.++.+|||+|||+|.++..+++.. +..+++|+|+|+.+++.++++....... ...++.++++|+.+ ++ ++.
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccc
Confidence 356799999999999999999884 5678999999999999999876543100 12589999999987 44 556
Q ss_pred CceeEEEEcccccCccc--------HHHHHHHHhcccCCCcEEEEEe
Q 027517 105 CFFDAITMGYGLRNVVD--------KRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 105 ~~~D~v~~~~~l~~~~~--------~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
.++|.|++.+.-.+... ...+++++.++|+|||.+++..
T Consensus 127 ~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp TCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 78999987543222111 1479999999999999998853
No 196
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.63 E-value=9.6e-16 Score=113.72 Aligned_cols=110 Identities=15% Similarity=0.185 Sum_probs=88.8
Q ss_pred hCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-C-C-----
Q 027517 30 SGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-P-F----- 102 (222)
Q Consensus 30 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~-~----- 102 (222)
....++.+|||+|||+|..+..+++.++++.+++++|+++.+++.+++++...+.. ++++++.+|+.+. + .
T Consensus 75 ~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~--~~i~~~~gda~~~l~~l~~~~~ 152 (247)
T 1sui_A 75 LKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVD--HKIDFREGPALPVLDEMIKDEK 152 (247)
T ss_dssp HHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCG--GGEEEEESCHHHHHHHHHHSGG
T ss_pred HHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CCeEEEECCHHHHHHHHHhccC
Confidence 33456679999999999999999998755789999999999999999987654432 4799999998763 2 1
Q ss_pred CCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 103 SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
+.++||+|++... ..+....++.+.++|+|||.+++.+.
T Consensus 153 ~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 153 NHGSYDFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp GTTCBSEEEECSC---STTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred CCCCEEEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 1468999998754 34568899999999999999988653
No 197
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.63 E-value=4.5e-15 Score=106.74 Aligned_cols=100 Identities=18% Similarity=0.219 Sum_probs=78.8
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCC-CCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC---------
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGS-QGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP--------- 101 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--------- 101 (222)
..++.+|||+|||+|.++..+++.+++ +.+++++|+++.. . .+++.++++|+.+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~------~--------~~~v~~~~~d~~~~~~~~~~~~~~ 85 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD------P--------IPNVYFIQGEIGKDNMNNIKNINY 85 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC------C--------CTTCEEEECCTTTTSSCCC-----
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC------C--------CCCceEEEccccchhhhhhccccc
Confidence 467789999999999999999988642 5799999999831 1 147899999998765
Q ss_pred ----------------CCCCceeEEEEcccccCc----ccH-------HHHHHHHhcccCCCcEEEEEecC
Q 027517 102 ----------------FSDCFFDAITMGYGLRNV----VDK-------RKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 102 ----------------~~~~~~D~v~~~~~l~~~----~~~-------~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
++.++||+|++...+++. .+. ..+++.+.++|+|||.+++..+.
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 86 IDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp ------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 455689999998887763 222 24788999999999999886554
No 198
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.63 E-value=8.1e-15 Score=112.58 Aligned_cols=110 Identities=17% Similarity=0.093 Sum_probs=83.8
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhc-CCCeeEEeCCCCCc-CCCCCceeEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKAC-YKNIEWVEGDALDL-PFSDCFFDAI 110 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~d~~~~-~~~~~~~D~v 110 (222)
+++.+|||+|||+|..+..+++.. +..+++++|+++.+++.+++++....... .++++++++|+.+. +..+++||+|
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvI 193 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 193 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEE
Confidence 456799999999999999998763 45699999999999999999875421001 26899999998763 2234689999
Q ss_pred EEcccccCc--ccH--HHHHHHHhcccCCCcEEEEEe
Q 027517 111 TMGYGLRNV--VDK--RKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 111 ~~~~~l~~~--~~~--~~~l~~~~~~l~~gG~l~i~~ 143 (222)
++...-..- ... ..+++.+++.|+|||.+++..
T Consensus 194 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 194 IVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 986532211 111 688999999999999998864
No 199
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.62 E-value=5.2e-15 Score=111.38 Aligned_cols=110 Identities=13% Similarity=0.042 Sum_probs=84.4
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhh-cCCCeeEEeCCCCCc-CCCCCceeEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA-CYKNIEWVEGDALDL-PFSDCFFDAI 110 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~d~~~~-~~~~~~~D~v 110 (222)
+++.+|||+|||+|..+..+++.. +..+++++|+++.+++.+++++...... ..++++++.+|+.+. +...++||+|
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~I 152 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI 152 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEE
Confidence 456799999999999999998762 4569999999999999999987432101 126899999998763 3335689999
Q ss_pred EEcccccCccc----HHHHHHHHhcccCCCcEEEEEe
Q 027517 111 TMGYGLRNVVD----KRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 111 ~~~~~l~~~~~----~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
++....+..+. ...+++.++++|+|||.+++..
T Consensus 153 i~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 153 MVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp EESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 99665432221 2678999999999999998863
No 200
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.62 E-value=1.2e-14 Score=116.74 Aligned_cols=120 Identities=21% Similarity=0.280 Sum_probs=95.1
Q ss_pred HHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC--C
Q 027517 25 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP--F 102 (222)
Q Consensus 25 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~ 102 (222)
.+...+...++.+|||+|||+|..+..+++.++..++++++|+++.+++.++++....+. .++.+.+.|+.+.+ +
T Consensus 250 l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~---~~v~~~~~D~~~~~~~~ 326 (450)
T 2yxl_A 250 VASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI---KIVKPLVKDARKAPEII 326 (450)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC---CSEEEECSCTTCCSSSS
T ss_pred HHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC---CcEEEEEcChhhcchhh
Confidence 344556778889999999999999999999874447999999999999999998866543 47999999998865 4
Q ss_pred CCCceeEEEEc------ccccCcccH----------------HHHHHHHhcccCCCcEEEEEecCCC
Q 027517 103 SDCFFDAITMG------YGLRNVVDK----------------RKALEESFRVLKPGSRISVLDFNKS 147 (222)
Q Consensus 103 ~~~~~D~v~~~------~~l~~~~~~----------------~~~l~~~~~~l~~gG~l~i~~~~~~ 147 (222)
++++||+|++. .++++.++. ..+++++.+.|||||++++.+.+..
T Consensus 327 ~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 327 GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 44679999963 334433432 5789999999999999998776543
No 201
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.62 E-value=6.9e-15 Score=111.85 Aligned_cols=110 Identities=15% Similarity=0.025 Sum_probs=82.2
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhh-cCCCeeEEeCCCCCc-CCCCCceeEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA-CYKNIEWVEGDALDL-PFSDCFFDAI 110 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~d~~~~-~~~~~~~D~v 110 (222)
+++.+|||+|||+|..+..+++.. +..+++++|+++.+++.+++++...... ..++++++.+|+.+. +...++||+|
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 167 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVI 167 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEE
Confidence 445799999999999999999763 4569999999999999999987432111 126899999998763 3345679999
Q ss_pred EEcccccCcc-----cHHHHHHHHhcccCCCcEEEEEe
Q 027517 111 TMGYGLRNVV-----DKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 111 ~~~~~l~~~~-----~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
++...-.+.. ....+++.+++.|+|||.+++..
T Consensus 168 i~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 168 IIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9864322121 12688999999999999998863
No 202
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.62 E-value=5e-15 Score=114.20 Aligned_cols=118 Identities=19% Similarity=0.152 Sum_probs=88.8
Q ss_pred HHHHHhhC-CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCC-CeeEEeCCCCCcC
Q 027517 24 RMAVSWSG-AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYK-NIEWVEGDALDLP 101 (222)
Q Consensus 24 ~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~ 101 (222)
..+.+.+. ..++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.++++....+.. . ++.++++|+.++.
T Consensus 142 ~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~---ga~V~~VD~s~~al~~a~~n~~~~gl~--~~~v~~i~~D~~~~l 216 (332)
T 2igt_A 142 EWLKNAVETADRPLKVLNLFGYTGVASLVAAAA---GAEVTHVDASKKAIGWAKENQVLAGLE--QAPIRWICEDAMKFI 216 (332)
T ss_dssp HHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHT---TCEEEEECSCHHHHHHHHHHHHHHTCT--TSCEEEECSCHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEcccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC--ccceEEEECcHHHHH
Confidence 34444443 345679999999999999999875 349999999999999999988655421 2 4899999988743
Q ss_pred C----CCCceeEEEEcccc----------cCcccHHHHHHHHhcccCCCcEEEEEecCC
Q 027517 102 F----SDCFFDAITMGYGL----------RNVVDKRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 102 ~----~~~~~D~v~~~~~l----------~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
. ..++||+|+++... +...+...+++.+.++|+|||.+++.....
T Consensus 217 ~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 217 QREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp HHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred HHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 1 14579999995542 122356789999999999999987765543
No 203
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.62 E-value=9.8e-15 Score=110.39 Aligned_cols=117 Identities=17% Similarity=0.133 Sum_probs=88.5
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 99 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 99 (222)
..+...+++.+...++.+|||+|||+|..+..+++. ++.+++++|+|+.+++.++++....+.. .++.++++|+.+
T Consensus 109 e~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~l~--~~v~~~~~D~~~ 184 (284)
T 1nv8_A 109 EELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGVS--DRFFVRKGEFLE 184 (284)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTTCT--TSEEEEESSTTG
T ss_pred HHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCC--CceEEEECcchh
Confidence 344445555554346679999999999999999987 5679999999999999999988655432 359999999987
Q ss_pred cCCCCCce---eEEEEccccc-----------Cccc--------HHHHHHHHh-cccCCCcEEEEE
Q 027517 100 LPFSDCFF---DAITMGYGLR-----------NVVD--------KRKALEESF-RVLKPGSRISVL 142 (222)
Q Consensus 100 ~~~~~~~~---D~v~~~~~l~-----------~~~~--------~~~~l~~~~-~~l~~gG~l~i~ 142 (222)
. .+ ++| |+|+++.... |.+. ...+++++. +.++|||.+++.
T Consensus 185 ~-~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 185 P-FK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp G-GG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred h-cc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 3 22 468 9999984332 2221 126899999 999999999874
No 204
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.62 E-value=7e-15 Score=111.18 Aligned_cols=111 Identities=17% Similarity=0.089 Sum_probs=85.3
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhh-cCCCeeEEeCCCCCc-CCCCCceeE
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA-CYKNIEWVEGDALDL-PFSDCFFDA 109 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~d~~~~-~~~~~~~D~ 109 (222)
.+++.+|||+|||+|..+..+++. .+..+++++|+++.+++.+++++...... ..++++++.+|+.+. +...++||+
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKY-KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDV 154 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceE
Confidence 445679999999999999999876 34569999999999999999987542110 126899999998763 222568999
Q ss_pred EEEcccccCccc--H--HHHHHHHhcccCCCcEEEEEe
Q 027517 110 ITMGYGLRNVVD--K--RKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 110 v~~~~~l~~~~~--~--~~~l~~~~~~l~~gG~l~i~~ 143 (222)
|++....+..+. . ..+++.+++.|+|||.+++..
T Consensus 155 Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 155 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 999654333222 2 689999999999999998763
No 205
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.62 E-value=7.7e-15 Score=108.43 Aligned_cols=116 Identities=15% Similarity=0.143 Sum_probs=90.2
Q ss_pred HHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-C--
Q 027517 25 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-P-- 101 (222)
Q Consensus 25 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~-- 101 (222)
.+.......++.+|||+|||+|..+..+++.++++.+++++|+++.+++.+++++...+.. .++.+..+|+.+. +
T Consensus 51 ~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~--~~v~~~~~d~~~~~~~~ 128 (239)
T 2hnk_A 51 FLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLE--NKIFLKLGSALETLQVL 128 (239)
T ss_dssp HHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG--GGEEEEESCHHHHHHHH
T ss_pred HHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CCEEEEECCHHHHHHHH
Confidence 3444444557789999999999999999998654679999999999999999987654322 3589999997652 2
Q ss_pred ------------CCC--CceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 102 ------------FSD--CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 102 ------------~~~--~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
++. ++||+|++... .++....++.+.+.|+|||++++.+..
T Consensus 129 ~~~~~~~~~~~~f~~~~~~fD~I~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 129 IDSKSAPSWASDFAFGPSSIDLFFLDAD---KENYPNYYPLILKLLKPGGLLIADNVL 183 (239)
T ss_dssp HHCSSCCGGGTTTCCSTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred HhhcccccccccccCCCCCcCEEEEeCC---HHHHHHHHHHHHHHcCCCeEEEEEccc
Confidence 122 67999998754 345678899999999999999986543
No 206
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.62 E-value=9.9e-15 Score=108.34 Aligned_cols=112 Identities=21% Similarity=0.222 Sum_probs=91.1
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCC
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 103 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 103 (222)
..+.......++.+|||+|||+|..+..+++. ..+++++|+++.+++.++++....+.. .++.+...|+.+...+
T Consensus 81 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~~~ 155 (248)
T 2yvl_A 81 FYIALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLG--KNVKFFNVDFKDAEVP 155 (248)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCC--TTEEEECSCTTTSCCC
T ss_pred HHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCC--CcEEEEEcChhhcccC
Confidence 35556667778899999999999999999987 459999999999999999887544321 4789999999875424
Q ss_pred CCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 104 DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
.++||+|++. .+++..+++++.++|+|||.+++....
T Consensus 156 ~~~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 156 EGIFHAAFVD-----VREPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp TTCBSEEEEC-----SSCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred CCcccEEEEC-----CcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 5679999983 456678899999999999999987644
No 207
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.61 E-value=2.8e-14 Score=112.09 Aligned_cols=105 Identities=14% Similarity=0.079 Sum_probs=84.8
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC-cCC-CCCceeEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD-LPF-SDCFFDAI 110 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~-~~~~~D~v 110 (222)
.++.+|||+| |+|.++..+++. ++..+++++|+++.+++.++++....+. .++.++++|+.+ ++. ..++||+|
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~-~~~~~v~~vDi~~~~l~~a~~~~~~~g~---~~v~~~~~D~~~~l~~~~~~~fD~V 245 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLS-GLPKRIAVLDIDERLTKFIEKAANEIGY---EDIEIFTFDLRKPLPDYALHKFDTF 245 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHH-TCCSEEEEECSCHHHHHHHHHHHHHHTC---CCEEEECCCTTSCCCTTTSSCBSEE
T ss_pred CCCCEEEEEC-CCCHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCC---CCEEEEEChhhhhchhhccCCccEE
Confidence 3578999999 999999999876 4556999999999999999999866542 379999999988 553 34579999
Q ss_pred EEcccccCcccHHHHHHHHhcccCCCcEEEEEe
Q 027517 111 TMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 111 ~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
+++.+++.. ....+++++.++|+|||++++..
T Consensus 246 i~~~p~~~~-~~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 246 ITDPPETLE-AIRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp EECCCSSHH-HHHHHHHHHHHTBCSTTCEEEEE
T ss_pred EECCCCchH-HHHHHHHHHHHHcccCCeEEEEE
Confidence 998776543 35788999999999999553333
No 208
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.61 E-value=1.6e-15 Score=111.53 Aligned_cols=110 Identities=18% Similarity=0.191 Sum_probs=87.7
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc----CCCC--
Q 027517 31 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL----PFSD-- 104 (222)
Q Consensus 31 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~----~~~~-- 104 (222)
...++.+|||+|||+|..+..+++.++++.+++++|+++.+++.++++....+.. .++.+..+|+.+. +..+
T Consensus 69 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~--~~i~~~~~d~~~~l~~l~~~~~~ 146 (232)
T 3cbg_A 69 SLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVA--EKISLRLGPALATLEQLTQGKPL 146 (232)
T ss_dssp HHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG--GGEEEEESCHHHHHHHHHTSSSC
T ss_pred HhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEEcCHHHHHHHHHhcCCC
Confidence 3346679999999999999999988655679999999999999999887654432 4689999997542 2222
Q ss_pred CceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 105 CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 105 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
++||+|++... .++....++++.+.|+|||.+++.+..
T Consensus 147 ~~fD~V~~d~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 147 PEFDLIFIDAD---KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp CCEEEEEECSC---GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred CCcCEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 67999998764 356688999999999999999886544
No 209
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.61 E-value=7.2e-15 Score=110.53 Aligned_cols=107 Identities=19% Similarity=0.225 Sum_probs=89.3
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEE
Q 027517 31 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAI 110 (222)
Q Consensus 31 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v 110 (222)
...++.+|||+|||+|.++..+++.. +..+|+++|+++.+++.++++....+. .++.++++|+.+.+. .++||+|
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~-~~~~V~~vD~s~~av~~a~~n~~~n~l---~~~~~~~~d~~~~~~-~~~~D~V 190 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYS-KPKLVYAIEKNPTAYHYLCENIKLNKL---NNVIPILADNRDVEL-KDVADRV 190 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHT-CCSEEEEEECCHHHHHHHHHHHHHTTC---SSEEEEESCGGGCCC-TTCEEEE
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCC---CCEEEEECChHHcCc-cCCceEE
Confidence 35678899999999999999999884 456999999999999999998865543 478999999988733 5679999
Q ss_pred EEcccccCcccHHHHHHHHhcccCCCcEEEEEecCC
Q 027517 111 TMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 111 ~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
++.... +...++..+.+.|+|||.+++.+...
T Consensus 191 i~d~p~----~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 191 IMGYVH----KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp EECCCS----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred EECCcc----cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 997764 55678889999999999999887664
No 210
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.60 E-value=4.2e-15 Score=115.74 Aligned_cols=116 Identities=22% Similarity=0.256 Sum_probs=88.2
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 99 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 99 (222)
..++..+.......++++|||||||+|.++..+++. + ..+|+++|.|+ +++.|++.....+.. .+|.++.+++++
T Consensus 69 ~aY~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~a-G-A~~V~ave~s~-~~~~a~~~~~~n~~~--~~i~~i~~~~~~ 143 (376)
T 4hc4_A 69 DAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQA-G-ARRVYAVEASA-IWQQAREVVRFNGLE--DRVHVLPGPVET 143 (376)
T ss_dssp HHHHHHHHTTHHHHTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEECST-THHHHHHHHHHTTCT--TTEEEEESCTTT
T ss_pred HHHHHHHHhCHHhcCCCEEEEeCCCccHHHHHHHHh-C-CCEEEEEeChH-HHHHHHHHHHHcCCC--ceEEEEeeeeee
Confidence 445555544333446889999999999998776665 2 23799999986 788888877665543 679999999999
Q ss_pred cCCCCCceeEEEE---cccccCcccHHHHHHHHhcccCCCcEEEE
Q 027517 100 LPFSDCFFDAITM---GYGLRNVVDKRKALEESFRVLKPGSRISV 141 (222)
Q Consensus 100 ~~~~~~~~D~v~~---~~~l~~~~~~~~~l~~~~~~l~~gG~l~i 141 (222)
+.++ +++|+|++ ...+.+-.....++....++|+|||.++-
T Consensus 144 ~~lp-e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 144 VELP-EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CCCS-SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ecCC-ccccEEEeecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 8776 67999998 44454555678888889999999998864
No 211
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.60 E-value=1.3e-14 Score=111.82 Aligned_cols=110 Identities=15% Similarity=0.165 Sum_probs=84.6
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhh-cCCCeeEEeCCCCCc--CCCCCcee
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA-CYKNIEWVEGDALDL--PFSDCFFD 108 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~d~~~~--~~~~~~~D 108 (222)
.+++.+|||||||+|..+..+++. .+..+++++|+++.+++.+++++.....+ ..++++++++|+.+. ..+.++||
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~-~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fD 196 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARH-ASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYD 196 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCcc
Confidence 455679999999999999999976 34569999999999999999987542101 125899999998764 23356899
Q ss_pred EEEEcccccC-ccc---HHHHHHHHhcccCCCcEEEEE
Q 027517 109 AITMGYGLRN-VVD---KRKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 109 ~v~~~~~l~~-~~~---~~~~l~~~~~~l~~gG~l~i~ 142 (222)
+|++...... ..+ ...+++.++++|+|||.+++.
T Consensus 197 lIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 197 AVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 9998654211 112 378999999999999999875
No 212
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.60 E-value=3.2e-15 Score=120.58 Aligned_cols=114 Identities=19% Similarity=0.188 Sum_probs=90.2
Q ss_pred HHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC
Q 027517 22 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP 101 (222)
Q Consensus 22 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 101 (222)
+...+++.+...++.+|||+|||+|.++..+++. +..+|+++|+++ +++.++++....+.. .+++++.+|+.+++
T Consensus 146 ~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~--~~~~V~gvD~s~-~l~~A~~~~~~~gl~--~~v~~~~~d~~~~~ 220 (480)
T 3b3j_A 146 YQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLT--DRIVVIPGKVEEVS 220 (480)
T ss_dssp HHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHT--TCSEEEEEECHH-HHHHHHHHHHHTTCT--TTEEEEESCTTTCC
T ss_pred HHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHc--CCCEEEEEEcHH-HHHHHHHHHHHcCCC--CcEEEEECchhhCc
Confidence 3444555555567789999999999999988874 345999999998 999998887654432 58999999999876
Q ss_pred CCCCceeEEEEcccccCcc--cHHHHHHHHhcccCCCcEEEE
Q 027517 102 FSDCFFDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISV 141 (222)
Q Consensus 102 ~~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~l~~gG~l~i 141 (222)
.+ ++||+|++..+++++. +....+.+++++|+|||.+++
T Consensus 221 ~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 221 LP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp CS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred cC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 55 5799999988767663 446678889999999999985
No 213
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.60 E-value=7.9e-15 Score=112.15 Aligned_cols=110 Identities=16% Similarity=0.081 Sum_probs=81.4
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhh-cCCCeeEEeCCCCCc-CCCCCceeEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA-CYKNIEWVEGDALDL-PFSDCFFDAI 110 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~d~~~~-~~~~~~~D~v 110 (222)
+++.+|||||||+|..+..+++. .+..+++++|+++.+++.+++++...... ..++++++.+|+.+. +...++||+|
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 185 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKH-ESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVI 185 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTC-TTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEE
Confidence 45679999999999999999876 35579999999999999999987542101 126899999998763 3345689999
Q ss_pred EEcccccCcccH----HHHHHHHhcccCCCcEEEEEe
Q 027517 111 TMGYGLRNVVDK----RKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 111 ~~~~~l~~~~~~----~~~l~~~~~~l~~gG~l~i~~ 143 (222)
++...-+.-+.. ..+++.++++|+|||.+++..
T Consensus 186 i~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 186 ITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 986642211211 678999999999999998864
No 214
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.60 E-value=3.4e-15 Score=110.16 Aligned_cols=110 Identities=15% Similarity=0.186 Sum_probs=88.5
Q ss_pred hCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-C-C-----
Q 027517 30 SGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-P-F----- 102 (222)
Q Consensus 30 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~-~----- 102 (222)
....++.+|||+|||+|..+..+++.++++.+++++|+++++++.+++++...+.. +++.++++|+.+. + .
T Consensus 66 ~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~--~~i~~~~gda~~~l~~l~~~~~ 143 (237)
T 3c3y_A 66 LKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVE--HKINFIESDAMLALDNLLQGQE 143 (237)
T ss_dssp HHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG--GGEEEEESCHHHHHHHHHHSTT
T ss_pred HHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEEcCHHHHHHHHHhccC
Confidence 34456779999999999999999998755789999999999999999987654432 4799999998763 2 1
Q ss_pred CCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 103 SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
+.++||+|++... ..+....++.+.+.|+|||.+++.+.
T Consensus 144 ~~~~fD~I~~d~~---~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 144 SEGSYDFGFVDAD---KPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp CTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred CCCCcCEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 1468999998643 34567889999999999999987643
No 215
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.60 E-value=5.2e-15 Score=112.81 Aligned_cols=112 Identities=13% Similarity=0.066 Sum_probs=83.6
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhh-cCCCeeEEeCCCCC-cCCCCCceeE
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA-CYKNIEWVEGDALD-LPFSDCFFDA 109 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~d~~~-~~~~~~~~D~ 109 (222)
..++.+|||||||+|..+..+++. .+..+++++|+++.+++.+++++...... ..++++++.+|+.+ ++...++||+
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~ 171 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKH-PSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDV 171 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceE
Confidence 355679999999999999999876 34569999999999999999987542111 12689999999876 3334578999
Q ss_pred EEEcccccCcc----cHHHHHHHHhcccCCCcEEEEEec
Q 027517 110 ITMGYGLRNVV----DKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 110 v~~~~~l~~~~----~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
|++....+..+ ....++++++++|+|||.+++...
T Consensus 172 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 172 IITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp EEEECC-----------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 99866533221 125689999999999999988653
No 216
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.59 E-value=1.2e-14 Score=111.43 Aligned_cols=110 Identities=14% Similarity=0.030 Sum_probs=85.8
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhh--hcCCCeeEEeCCCCCc-CCCCCceeE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK--ACYKNIEWVEGDALDL-PFSDCFFDA 109 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~d~~~~-~~~~~~~D~ 109 (222)
+++.+|||||||+|..+..+++.. +..+++++|+++.+++.+++++..... -..++++++.+|+.+. +...++||+
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDV 154 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccE
Confidence 456799999999999999998863 456899999999999999988753211 0126899999998763 334578999
Q ss_pred EEEcccccC---cc--c--HHHHHHHHhcccCCCcEEEEEe
Q 027517 110 ITMGYGLRN---VV--D--KRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 110 v~~~~~l~~---~~--~--~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
|++....+. -+ . ...+++.++++|+|||.+++..
T Consensus 155 Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 155 VIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 999876544 11 1 3688999999999999998863
No 217
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.59 E-value=6.8e-14 Score=104.72 Aligned_cols=112 Identities=21% Similarity=0.282 Sum_probs=87.6
Q ss_pred HHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC
Q 027517 23 KRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF 102 (222)
Q Consensus 23 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 102 (222)
+..+...+ .++.+|||+|||+|.++..+++. ...+|+++|+++.+++.++++....+.. .+++++++|+.+++.
T Consensus 116 r~ri~~~~--~~g~~VlD~~aG~G~~~i~~a~~--g~~~V~avD~np~a~~~~~~N~~~N~v~--~~v~~~~~D~~~~~~ 189 (278)
T 3k6r_A 116 RVRMAKVA--KPDELVVDMFAGIGHLSLPIAVY--GKAKVIAIEKDPYTFKFLVENIHLNKVE--DRMSAYNMDNRDFPG 189 (278)
T ss_dssp HHHHHHHC--CTTCEEEETTCTTTTTTHHHHHH--TCCEEEEECCCHHHHHHHHHHHHHTTCT--TTEEEECSCTTTCCC
T ss_pred HHHHHHhc--CCCCEEEEecCcCcHHHHHHHHh--cCCeEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEeCcHHHhcc
Confidence 34444443 57889999999999999999887 2458999999999999999998766543 579999999988754
Q ss_pred CCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 103 SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
.+.||.|+++.... ...++....+.|++||++.+.+..
T Consensus 190 -~~~~D~Vi~~~p~~----~~~~l~~a~~~lk~gG~ih~~~~~ 227 (278)
T 3k6r_A 190 -ENIADRILMGYVVR----THEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp -CSCEEEEEECCCSS----GGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred -ccCCCEEEECCCCc----HHHHHHHHHHHcCCCCEEEEEeee
Confidence 46799999875432 245677778899999998765543
No 218
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.58 E-value=2.5e-14 Score=115.22 Aligned_cols=117 Identities=20% Similarity=0.304 Sum_probs=92.0
Q ss_pred HHhhCCC--CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC-C
Q 027517 27 VSWSGAK--TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF-S 103 (222)
Q Consensus 27 ~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~ 103 (222)
...+... ++.+|||+|||+|..+.++++.+++.+.|+++|+++.+++.+++++...+. .++.+++.|+.+++. .
T Consensus 108 ~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~---~nv~~~~~D~~~~~~~~ 184 (479)
T 2frx_A 108 VAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI---SNVALTHFDGRVFGAAV 184 (479)
T ss_dssp HHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC---CSEEEECCCSTTHHHHS
T ss_pred HHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEeCCHHHhhhhc
Confidence 3445555 889999999999999999999876567999999999999999999876543 479999999988653 3
Q ss_pred CCceeEEEEccc------ccCccc----------------HHHHHHHHhcccCCCcEEEEEecCC
Q 027517 104 DCFFDAITMGYG------LRNVVD----------------KRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 104 ~~~~D~v~~~~~------l~~~~~----------------~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
.++||.|++... +...++ ...+++++.++|||||++++.+.+.
T Consensus 185 ~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 185 PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp TTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 468999998322 222222 2468999999999999998876543
No 219
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.58 E-value=3.4e-15 Score=109.61 Aligned_cols=112 Identities=15% Similarity=0.196 Sum_probs=88.5
Q ss_pred hhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc--CCC--C
Q 027517 29 WSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL--PFS--D 104 (222)
Q Consensus 29 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~--~ 104 (222)
.....++.+|||+|||+|..+..+++.++++.+++++|+++.+++.+++++...+.. .++.++++|+.+. ..+ .
T Consensus 64 l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~--~~i~~~~~d~~~~~~~~~~~~ 141 (229)
T 2avd_A 64 LARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAE--HKIDLRLKPALETLDELLAAG 141 (229)
T ss_dssp HHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCT--TTEEEEESCHHHHHHHHHHTT
T ss_pred HHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC--CeEEEEEcCHHHHHHHHHhcC
Confidence 334456789999999999999999987644679999999999999999987654322 5899999998653 111 1
Q ss_pred --CceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 105 --CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 105 --~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
++||+|++... ..+....++.+.+.|+|||.+++.+..
T Consensus 142 ~~~~~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 142 EAGTFDVAVVDAD---KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp CTTCEEEEEECSC---STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred CCCCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 57999999654 345678899999999999999886543
No 220
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.58 E-value=3.6e-14 Score=105.89 Aligned_cols=100 Identities=15% Similarity=-0.079 Sum_probs=80.9
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhh-hcCCCeeEEeCCCCCcCCCCCceeEEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK-ACYKNIEWVEGDALDLPFSDCFFDAIT 111 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~d~~~~~~~~~~~D~v~ 111 (222)
+.+.+|||||||+|..+..+++. + .+++++|+++.+++.+++++..... -..++++++.+|..+.. ++||+|+
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii 144 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIF 144 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEE
Confidence 45679999999999999999876 3 6999999999999999988754211 11258999999988754 6799999
Q ss_pred EcccccCcccHHHHHHHHhcccCCCcEEEEEe
Q 027517 112 MGYGLRNVVDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 112 ~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
+.. .++..+++.+++.|+|||.+++..
T Consensus 145 ~d~-----~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 145 CLQ-----EPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp ESS-----CCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred ECC-----CChHHHHHHHHHhcCCCcEEEEEc
Confidence 863 345568999999999999998853
No 221
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.57 E-value=2.4e-14 Score=108.75 Aligned_cols=107 Identities=12% Similarity=0.091 Sum_probs=85.1
Q ss_pred CeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc--CCCCCceeEEEEc
Q 027517 36 DNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL--PFSDCFFDAITMG 113 (222)
Q Consensus 36 ~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~D~v~~~ 113 (222)
.+|||||||+|..+..+++.+ ++.+++++|+++.+++.+++++.... .++++++.+|+.+. ..+.++||+|++.
T Consensus 91 ~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~~~~---~~rv~v~~~Da~~~l~~~~~~~fDvIi~D 166 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY-PQSRNTVVELDAELARLSREWFDIPR---APRVKIRVDDARMVAESFTPASRDVIIRD 166 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSCCCC---TTTEEEEESCHHHHHHTCCTTCEEEEEEC
T ss_pred CEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhccccC---CCceEEEECcHHHHHhhccCCCCCEEEEC
Confidence 499999999999999999875 56799999999999999999874321 26899999998764 2345789999986
Q ss_pred ccccCc-cc---HHHHHHHHhcccCCCcEEEEEecCC
Q 027517 114 YGLRNV-VD---KRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 114 ~~l~~~-~~---~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
...+.. +. ...+++.++++|+|||.+++.....
T Consensus 167 ~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~ 203 (317)
T 3gjy_A 167 VFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDH 203 (317)
T ss_dssp CSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred CCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 543322 11 2689999999999999998876543
No 222
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.57 E-value=2.9e-14 Score=104.05 Aligned_cols=105 Identities=11% Similarity=0.066 Sum_probs=86.5
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
.+..+|||||||+|-++..++.. .+..+|+++|+++.+++.+++++...+ .+..+...|....+ +.++||++++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~-~p~a~y~a~DId~~~le~a~~~l~~~g----~~~~~~v~D~~~~~-p~~~~DvaL~ 204 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGL-PAETVYIASDIDARLVGFVDEALTRLN----VPHRTNVADLLEDR-LDEPADVTLL 204 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTC-CTTCEEEEEESBHHHHHHHHHHHHHTT----CCEEEEECCTTTSC-CCSCCSEEEE
T ss_pred CCCceeeeeccCccHHHHHHHhh-CCCCEEEEEeCCHHHHHHHHHHHHhcC----CCceEEEeeecccC-CCCCcchHHH
Confidence 44679999999999999988876 467899999999999999999987765 45788888887654 3467999999
Q ss_pred cccccCcccH--HHHHHHHhcccCCCcEEEEEec
Q 027517 113 GYGLRNVVDK--RKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 113 ~~~l~~~~~~--~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
+-+++++++. ...+ ++...|+|+|.++-.+.
T Consensus 205 lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 205 LKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp TTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEEC
T ss_pred HHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccc
Confidence 9999999653 3445 89999999998865443
No 223
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.57 E-value=1.8e-14 Score=114.87 Aligned_cols=119 Identities=19% Similarity=0.274 Sum_probs=93.1
Q ss_pred HHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-CC
Q 027517 25 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-FS 103 (222)
Q Consensus 25 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~ 103 (222)
.+...+...++.+|||+|||+|..+.++++.++..++|+++|+++.+++.+++++...+. .++.+.+.|+.+++ ..
T Consensus 96 l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~---~nv~v~~~Da~~l~~~~ 172 (456)
T 3m4x_A 96 IVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV---SNAIVTNHAPAELVPHF 172 (456)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC---SSEEEECCCHHHHHHHH
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CceEEEeCCHHHhhhhc
Confidence 344556677889999999999999999999876667999999999999999999877654 47899999987754 22
Q ss_pred CCceeEEEEccc------ccCccc----------------HHHHHHHHhcccCCCcEEEEEecCC
Q 027517 104 DCFFDAITMGYG------LRNVVD----------------KRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 104 ~~~~D~v~~~~~------l~~~~~----------------~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
.++||+|++... +..-++ ...+++.+.++|||||+|+.++-+.
T Consensus 173 ~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 173 SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 468999998543 222122 1378999999999999998865543
No 224
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.56 E-value=3.4e-14 Score=107.33 Aligned_cols=108 Identities=11% Similarity=0.059 Sum_probs=82.4
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhh--hhh------cCCCeeEEeCCCCCc-CC
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLV--SKA------CYKNIEWVEGDALDL-PF 102 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~------~~~~i~~~~~d~~~~-~~ 102 (222)
..++.+|||+|||+|..+..+++. +..+++++|+++.+++.+++++ .. +.. ..++++++.+|+.+. +.
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~ 149 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN 149 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc
Confidence 345679999999999999999876 4569999999999999999887 32 110 126899999998653 22
Q ss_pred CCCceeEEEEcccccCcc--c--HHHHHHHHhcccCCCcEEEEEe
Q 027517 103 SDCFFDAITMGYGLRNVV--D--KRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~~~--~--~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
.++||+|++....+.-+ . ...+++.++++|+|||.+++..
T Consensus 150 -~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 150 -NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp -CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred -cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 46799999876532211 1 2678999999999999998863
No 225
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.56 E-value=2.1e-14 Score=114.72 Aligned_cols=118 Identities=14% Similarity=0.234 Sum_probs=92.3
Q ss_pred HHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-CC
Q 027517 25 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-FS 103 (222)
Q Consensus 25 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~ 103 (222)
.+...+...++.+|||+|||+|..+..+++.++..++|+++|+++.+++.+++++...+. . +.+.+.|+.+++ ..
T Consensus 92 l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~---~-v~~~~~Da~~l~~~~ 167 (464)
T 3m6w_A 92 AVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA---P-LAVTQAPPRALAEAF 167 (464)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC---C-CEEECSCHHHHHHHH
T ss_pred HHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---e-EEEEECCHHHhhhhc
Confidence 344556677889999999999999999999876667999999999999999999876543 3 889999987764 23
Q ss_pred CCceeEEEEccc------ccCccc----------------HHHHHHHHhcccCCCcEEEEEecCC
Q 027517 104 DCFFDAITMGYG------LRNVVD----------------KRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 104 ~~~~D~v~~~~~------l~~~~~----------------~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
.++||+|++... +...++ ...+++.+.++|||||+|+.++.+.
T Consensus 168 ~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 168 GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 468999996332 222222 2678999999999999998866543
No 226
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.56 E-value=7e-14 Score=111.71 Aligned_cols=118 Identities=19% Similarity=0.332 Sum_probs=93.1
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC--
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-- 101 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-- 101 (222)
..+...+...++.+|||+|||+|..+.++++.. ++++++++|+++.+++.++++....+ .++.+.+.|+.+.+
T Consensus 236 ~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~-~~~~v~a~D~~~~~l~~~~~~~~~~g----~~~~~~~~D~~~~~~~ 310 (429)
T 1sqg_A 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLG----MKATVKQGDGRYPSQW 310 (429)
T ss_dssp HTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHC-TTCEEEEEESSTTTHHHHHHHHHHTT----CCCEEEECCTTCTHHH
T ss_pred HHHHHHcCCCCcCeEEEECCCchHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHHcC----CCeEEEeCchhhchhh
Confidence 344556677888999999999999999999985 44799999999999999999886654 25788999998765
Q ss_pred CCCCceeEEEEcc------cccCcccH----------------HHHHHHHhcccCCCcEEEEEecCC
Q 027517 102 FSDCFFDAITMGY------GLRNVVDK----------------RKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 102 ~~~~~~D~v~~~~------~l~~~~~~----------------~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
++.++||.|++.. ++++.++. ..+++++.+.|||||++++.+.+.
T Consensus 311 ~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 311 CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp HTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred cccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 4456899999732 23333432 478999999999999999877554
No 227
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.55 E-value=2.8e-15 Score=123.69 Aligned_cols=108 Identities=17% Similarity=0.278 Sum_probs=87.1
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc--CCCCCceeEEE
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL--PFSDCFFDAIT 111 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~D~v~ 111 (222)
.+.+|||||||+|.++..+++. +++|+|+|.++.+++.|+.+....+. .++.+.+++++++ ...+++||+|+
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~---~~~~~~~~~~~~~~~~~~~~~fD~v~ 139 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPD---FAAEFRVGRIEEVIAALEEGEFDLAI 139 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTT---SEEEEEECCHHHHHHHCCTTSCSEEE
T ss_pred CCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCC---CceEEEECCHHHHhhhccCCCccEEE
Confidence 4579999999999999999976 67999999999999999988754321 3689999999886 34567899999
Q ss_pred EcccccCcccHHH--HHHHHhcccCCCcEEEEEecCCC
Q 027517 112 MGYGLRNVVDKRK--ALEESFRVLKPGSRISVLDFNKS 147 (222)
Q Consensus 112 ~~~~l~~~~~~~~--~l~~~~~~l~~gG~l~i~~~~~~ 147 (222)
|..+++|++++.. .+..+.+.|+++|..++..+...
T Consensus 140 ~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~ 177 (569)
T 4azs_A 140 GLSVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAVK 177 (569)
T ss_dssp EESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCCT
T ss_pred ECcchhcCCCHHHHHHHHHHHHHhccccceeeEEeccc
Confidence 9999999987643 34567777888888777665543
No 228
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.55 E-value=4.5e-14 Score=106.30 Aligned_cols=97 Identities=14% Similarity=0.028 Sum_probs=73.2
Q ss_pred hCCCCCCeEEEecCCC------ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeE-EeCCCCCcCC
Q 027517 30 SGAKTGDNVLDVCCGS------GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEW-VEGDALDLPF 102 (222)
Q Consensus 30 ~~~~~~~~vLdiG~G~------G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~d~~~~~~ 102 (222)
....++.+|||+|||+ |. ..+++..+++++|+++|+++. . +++++ +++|+.+.++
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v--------~~v~~~i~gD~~~~~~ 120 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V--------SDADSTLIGDCATVHT 120 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B--------CSSSEEEESCGGGCCC
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C--------CCCEEEEECccccCCc
Confidence 3567888999999955 65 555666555679999999997 1 36888 9999988765
Q ss_pred CCCceeEEEEcccccC-----------cccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 103 SDCFFDAITMGYGLRN-----------VVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~-----------~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
+ ++||+|+++...+. ......+++.+.++|||||.+++..+.
T Consensus 121 ~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 121 A-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 173 (290)
T ss_dssp S-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred c-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 4 67999999754321 112357899999999999999986544
No 229
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.54 E-value=1.1e-14 Score=109.36 Aligned_cols=106 Identities=19% Similarity=0.187 Sum_probs=76.2
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEE--eCCCCCcCCCCCcee
Q 027517 31 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWV--EGDALDLPFSDCFFD 108 (222)
Q Consensus 31 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~d~~~~~~~~~~~D 108 (222)
...++.+|||+|||+|.++..+++. .+|+++|+++ ++..+++....... ...++.++ ++|+.+++ +++||
T Consensus 79 ~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~-~~~~v~~~~~~~D~~~l~--~~~fD 150 (276)
T 2wa2_A 79 GVELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVET-FGWNLITFKSKVDVTKME--PFQAD 150 (276)
T ss_dssp SCCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCC-TTGGGEEEECSCCGGGCC--CCCCS
T ss_pred CCCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhh-cCCCeEEEeccCcHhhCC--CCCcC
Confidence 3457889999999999999998865 5899999998 54333322110000 00268888 89998865 56899
Q ss_pred EEEEcccccCccc----HH---HHHHHHhcccCCCc--EEEEEecC
Q 027517 109 AITMGYGLRNVVD----KR---KALEESFRVLKPGS--RISVLDFN 145 (222)
Q Consensus 109 ~v~~~~~l~~~~~----~~---~~l~~~~~~l~~gG--~l~i~~~~ 145 (222)
+|++..+ ++... .. .+++.+.++||||| .+++..+.
T Consensus 151 ~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 151 TVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred EEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 9999877 44322 11 37899999999999 98886666
No 230
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.54 E-value=2.2e-13 Score=97.88 Aligned_cols=90 Identities=19% Similarity=0.293 Sum_probs=71.6
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEE
Q 027517 31 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAI 110 (222)
Q Consensus 31 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v 110 (222)
...++.+|||+|||+|.++..+++. ...+++++|+++.+++.++++. .++.++++|+.+++ ++||+|
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~--------~~~~~~~~d~~~~~---~~~D~v 114 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL--GAESVTAFDIDPDAIETAKRNC--------GGVNFMVADVSEIS---GKYDTW 114 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT--TBSEEEEEESCHHHHHHHHHHC--------TTSEEEECCGGGCC---CCEEEE
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhc--------CCCEEEECcHHHCC---CCeeEE
Confidence 3456789999999999999998876 2347999999999999999886 27899999998864 679999
Q ss_pred EEcccccCccc--HHHHHHHHhccc
Q 027517 111 TMGYGLRNVVD--KRKALEESFRVL 133 (222)
Q Consensus 111 ~~~~~l~~~~~--~~~~l~~~~~~l 133 (222)
+++.++++..+ ...+++++.+.+
T Consensus 115 ~~~~p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 115 IMNPPFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp EECCCC-------CHHHHHHHHHHE
T ss_pred EECCCchhccCchhHHHHHHHHHhc
Confidence 99999998854 356788888887
No 231
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.54 E-value=1.4e-14 Score=108.30 Aligned_cols=109 Identities=17% Similarity=0.089 Sum_probs=77.2
Q ss_pred HhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEE--eCCCCCcCCCCC
Q 027517 28 SWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWV--EGDALDLPFSDC 105 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~d~~~~~~~~~ 105 (222)
+.....++.+|||+|||+|.++..+++. .+|+++|+++ ++..+++....... ...++.++ ++|+.+++ ++
T Consensus 68 ~~~~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~-~~~~v~~~~~~~D~~~l~--~~ 139 (265)
T 2oxt_A 68 ERGYVELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITES-YGWNIVKFKSRVDIHTLP--VE 139 (265)
T ss_dssp HHTSCCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCB-TTGGGEEEECSCCTTTSC--CC
T ss_pred HcCCCCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhc-cCCCeEEEecccCHhHCC--CC
Confidence 3334567889999999999999988865 5899999998 43333222110000 00168888 89998875 56
Q ss_pred ceeEEEEcccccCcccH----H---HHHHHHhcccCCCc--EEEEEecC
Q 027517 106 FFDAITMGYGLRNVVDK----R---KALEESFRVLKPGS--RISVLDFN 145 (222)
Q Consensus 106 ~~D~v~~~~~l~~~~~~----~---~~l~~~~~~l~~gG--~l~i~~~~ 145 (222)
+||+|+|..+ ++..+. . .+++.+.++|+||| .+++..+.
T Consensus 140 ~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 140 RTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred CCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 8999999877 443221 1 37899999999999 99887766
No 232
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.54 E-value=4.2e-13 Score=96.84 Aligned_cols=99 Identities=18% Similarity=0.225 Sum_probs=78.7
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEE
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 111 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~ 111 (222)
..++.+|||+|||+|.++..+++. + ..+++++|+++.+++.++++....+ .++.++++|+.+++ .+||+|+
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~---~~~D~v~ 117 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLL-G-AKEVICVEVDKEAVDVLIENLGEFK----GKFKVFIGDVSEFN---SRVDIVI 117 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHTGGGT----TSEEEEESCGGGCC---CCCSEEE
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcC----CCEEEEECchHHcC---CCCCEEE
Confidence 456789999999999999999876 2 2379999999999999999876543 27899999998864 4799999
Q ss_pred EcccccCcc--cHHHHHHHHhcccCCCcEEEEE
Q 027517 112 MGYGLRNVV--DKRKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 112 ~~~~l~~~~--~~~~~l~~~~~~l~~gG~l~i~ 142 (222)
++.+++... .....++.+.+.+ |+ +++.
T Consensus 118 ~~~p~~~~~~~~~~~~l~~~~~~l--~~-~~~~ 147 (207)
T 1wy7_A 118 MNPPFGSQRKHADRPFLLKAFEIS--DV-VYSI 147 (207)
T ss_dssp ECCCCSSSSTTTTHHHHHHHHHHC--SE-EEEE
T ss_pred EcCCCccccCCchHHHHHHHHHhc--Cc-EEEE
Confidence 999887764 3456788888887 44 4443
No 233
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.53 E-value=1e-13 Score=99.23 Aligned_cols=101 Identities=20% Similarity=0.255 Sum_probs=77.0
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCC--------CcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEE-eCCCCCcC-
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQ--------GKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWV-EGDALDLP- 101 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~--------~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~d~~~~~- 101 (222)
..++.+|||+|||+|.++..+++.++.. .+++++|+++.. .. .++.++ .+|+...+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------~~--------~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------PL--------EGATFLCPADVTDPRT 85 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------CC--------TTCEEECSCCTTSHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc------cC--------CCCeEEEeccCCCHHH
Confidence 4678899999999999999999986432 689999999842 01 467888 88877642
Q ss_pred -------CCCCceeEEEEcccccC----cccH-------HHHHHHHhcccCCCcEEEEEecCC
Q 027517 102 -------FSDCFFDAITMGYGLRN----VVDK-------RKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 102 -------~~~~~~D~v~~~~~l~~----~~~~-------~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
++.++||+|++...++. ..+. ..+++++.++|+|||.+++..+..
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 23457999999765543 2232 478999999999999999876654
No 234
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.52 E-value=3.4e-14 Score=107.52 Aligned_cols=114 Identities=22% Similarity=0.275 Sum_probs=84.9
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 99 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 99 (222)
....+.+++.+...++.+|||+|||+|.++..+++. +.+++++|+++.+++.++++....+.. ++++++++|+.+
T Consensus 14 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~D~~~ 88 (285)
T 1zq9_A 14 PLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPVA--SKLQVLVGDVLK 88 (285)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTTG--GGEEEEESCTTT
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCCC--CceEEEEcceec
Confidence 444566777777778889999999999999999987 358999999999999999886533211 479999999988
Q ss_pred cCCCCCceeEEEEcccccCcccH-HHHHH--------------HH--hcccCCCcEEE
Q 027517 100 LPFSDCFFDAITMGYGLRNVVDK-RKALE--------------ES--FRVLKPGSRIS 140 (222)
Q Consensus 100 ~~~~~~~~D~v~~~~~l~~~~~~-~~~l~--------------~~--~~~l~~gG~l~ 140 (222)
.+++ +||+|+++..++...+. ..++. ++ +.+++|||.++
T Consensus 89 ~~~~--~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 89 TDLP--FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp SCCC--CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred ccch--hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 7654 69999998765543322 12222 12 35889999763
No 235
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.51 E-value=1.1e-13 Score=98.58 Aligned_cols=98 Identities=16% Similarity=0.311 Sum_probs=74.7
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC--------C
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF--------S 103 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--------~ 103 (222)
..++.+|||+|||+|.++..+++. ..+|+++|+++.. .. +++.++++|+.+.+. .
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~------~~--------~~v~~~~~D~~~~~~~~~~~~~~~ 85 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME------EI--------AGVRFIRCDIFKETIFDDIDRALR 85 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC------CC--------TTCEEEECCTTSSSHHHHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc------cC--------CCeEEEEccccCHHHHHHHHHHhh
Confidence 467889999999999999999876 5699999999841 11 589999999987541 1
Q ss_pred ---CCceeEEEEcccccCc----cc-------HHHHHHHHhcccCCCcEEEEEecCC
Q 027517 104 ---DCFFDAITMGYGLRNV----VD-------KRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 104 ---~~~~D~v~~~~~l~~~----~~-------~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
.++||+|++....... .+ ...+++.+.++|||||.+++..+..
T Consensus 86 ~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 86 EEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp HHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred cccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 0389999997653322 11 2567888999999999998866543
No 236
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.49 E-value=2.5e-13 Score=106.94 Aligned_cols=110 Identities=16% Similarity=0.196 Sum_probs=84.2
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCC-CeeEEeCCCCCc-CC---CCCce
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYK-NIEWVEGDALDL-PF---SDCFF 107 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~-~~---~~~~~ 107 (222)
.++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.+++++...+.. . ++.++++|+.+. +. ...+|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~-g-a~~V~~vD~s~~al~~A~~N~~~n~~~--~~~v~~~~~D~~~~l~~~~~~~~~f 286 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMG-G-AMATTSVDLAKRSRALSLAHFEANHLD--MANHQLVVMDVFDYFKYARRHHLTY 286 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHT-T-BSEEEEEESCTTHHHHHHHHHHHTTCC--CTTEEEEESCHHHHHHHHHHTTCCE
T ss_pred cCCCeEEEEeeccCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCC--ccceEEEECCHHHHHHHHHHhCCCc
Confidence 56789999999999999999875 1 238999999999999999988655431 2 799999998763 21 23579
Q ss_pred eEEEEccccc-----Ccc----cHHHHHHHHhcccCCCcEEEEEecCC
Q 027517 108 DAITMGYGLR-----NVV----DKRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 108 D~v~~~~~l~-----~~~----~~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
|+|++..... ... ....+++.+.+.|+|||.+++.+...
T Consensus 287 D~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 287 DIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp EEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred cEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 9999865442 222 34567788899999999998876443
No 237
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.49 E-value=4.4e-13 Score=96.97 Aligned_cols=102 Identities=16% Similarity=0.094 Sum_probs=82.0
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
.++.+|||+|||+|-++..+. +...|+++|+++.+++.+++.+...+ .+..+...|....+.+ ++||+|++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g----~~~~~~v~D~~~~~~~-~~~DvvLl 174 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKD----WDFTFALQDVLCAPPA-EAGDLALI 174 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTT----CEEEEEECCTTTSCCC-CBCSEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcC----CCceEEEeecccCCCC-CCcchHHH
Confidence 557799999999999998877 46799999999999999999976554 5778899998876654 58999999
Q ss_pred cccccCcccH-HHHHHHHhcccCCCcEEEEEe
Q 027517 113 GYGLRNVVDK-RKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 113 ~~~l~~~~~~-~~~l~~~~~~l~~gG~l~i~~ 143 (222)
+-++|++++. .....++...|+++|.++-..
T Consensus 175 lk~lh~LE~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 175 FKLLPLLEREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp ESCHHHHHHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred HHHHHHhhhhchhhHHHHHHHhcCCCEEEEcC
Confidence 9999988542 223337888999997775443
No 238
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.47 E-value=1.5e-13 Score=104.79 Aligned_cols=104 Identities=16% Similarity=0.210 Sum_probs=74.0
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeC----ChhHHHHHhcchhhhhhhcCCCeeEEeC-CCCCcCCCCCc
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDF----SKNQLSMASSRQDLVSKACYKNIEWVEG-DALDLPFSDCF 106 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~ 106 (222)
..++.+|||+|||+|.++..+++. .+|+++|+ ++.+++... ....+ .+++.++++ |+..++ .++
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~--~~~~~---~~~v~~~~~~D~~~l~--~~~ 148 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIP--MSTYG---WNLVRLQSGVDVFFIP--PER 148 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCC--CCSTT---GGGEEEECSCCTTTSC--CCC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHH--hhhcC---CCCeEEEeccccccCC--cCC
Confidence 466789999999999999999865 48999999 554432111 11111 147889988 887764 468
Q ss_pred eeEEEEccccc---CcccHH---HHHHHHhcccCCCcEEEEEecCC
Q 027517 107 FDAITMGYGLR---NVVDKR---KALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 107 ~D~v~~~~~l~---~~~~~~---~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
||+|+|..+++ +..+.. .++..+.++|||||.+++..+..
T Consensus 149 fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 149 CDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred CCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 99999987653 222222 57888999999999988765544
No 239
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.47 E-value=1.6e-12 Score=102.33 Aligned_cols=107 Identities=14% Similarity=0.141 Sum_probs=81.4
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-CCCCceeEEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-FSDCFFDAIT 111 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~v~ 111 (222)
.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.+++++...+. ...+.++|+.+.. ...+.||+|+
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~---ga~V~avDis~~al~~a~~n~~~ng~----~~~~~~~D~~~~l~~~~~~fD~Ii 285 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARK---GAYALAVDKDLEALGVLDQAALRLGL----RVDIRHGEALPTLRGLEGPFHHVL 285 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTC----CCEEEESCHHHHHHTCCCCEEEEE
T ss_pred cCCCeEEEcccchhHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHhCC----CCcEEEccHHHHHHHhcCCCCEEE
Confidence 35889999999999999999875 34699999999999999999876543 2356688887642 2123499999
Q ss_pred EcccccCc---------ccHHHHHHHHhcccCCCcEEEEEecCC
Q 027517 112 MGYGLRNV---------VDKRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 112 ~~~~l~~~---------~~~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
+....... .+...+++.+.++|+|||.+++.....
T Consensus 286 ~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 286 LDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp ECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 97654221 234678899999999999998665443
No 240
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.45 E-value=6.8e-13 Score=103.11 Aligned_cols=110 Identities=21% Similarity=0.235 Sum_probs=86.9
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCC----CcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCc
Q 027517 31 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQ----GKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCF 106 (222)
Q Consensus 31 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~----~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 106 (222)
...++.+|||+|||+|.++..+++.+... .+++|+|+++.+++.|+.+....+ .++.+.++|..... +.++
T Consensus 127 ~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g----~~~~i~~~D~l~~~-~~~~ 201 (344)
T 2f8l_A 127 QKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR----QKMTLLHQDGLANL-LVDP 201 (344)
T ss_dssp TTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT----CCCEEEESCTTSCC-CCCC
T ss_pred CCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC----CCceEEECCCCCcc-ccCC
Confidence 34466799999999999999998876322 689999999999999998875443 26789999987633 3467
Q ss_pred eeEEEEcccccCcccH------------------HHHHHHHhcccCCCcEEEEEecC
Q 027517 107 FDAITMGYGLRNVVDK------------------RKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 107 ~D~v~~~~~l~~~~~~------------------~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
||+|+++.++++++.. ..+++++.+.|+|||+++++.+.
T Consensus 202 fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 202 VDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPD 258 (344)
T ss_dssp EEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEG
T ss_pred ccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECc
Confidence 9999999887665322 25799999999999999887644
No 241
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.45 E-value=1.9e-12 Score=102.47 Aligned_cols=109 Identities=18% Similarity=0.207 Sum_probs=86.1
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhh-hcCCCeeEEeCCCCCcCC----CCCce
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK-ACYKNIEWVEGDALDLPF----SDCFF 107 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~d~~~~~~----~~~~~ 107 (222)
.++.+|||+|||+|.++..+++. + ..+|+++|+++.+++.++++....+. . .+++++++|+.+... ...+|
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~-g-~~~V~~vD~s~~al~~a~~n~~~ngl~~--~~v~~~~~D~~~~~~~~~~~~~~f 294 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMG-G-CSQVVSVDTSQEALDIARQNVELNKLDL--SKAEFVRDDVFKLLRTYRDRGEKF 294 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCCG--GGEEEEESCHHHHHHHHHHTTCCE
T ss_pred hCCCeEEEeeccCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCc--cceEEEECCHHHHHHHHHhcCCCC
Confidence 46789999999999999999876 2 34899999999999999998865542 2 378999999877421 13579
Q ss_pred eEEEEccccc---------CcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 108 DAITMGYGLR---------NVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 108 D~v~~~~~l~---------~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
|+|++..... .......++..+.+.|+|||.+++.+..
T Consensus 295 D~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 295 DVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp EEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 9999975432 2245678899999999999999887644
No 242
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.44 E-value=2e-12 Score=100.06 Aligned_cols=101 Identities=16% Similarity=0.251 Sum_probs=82.4
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
.++.+|||+|||+|.++.. ++ ...+|+++|+++.+++.++++....+.. .++.++++|+.+.. ++||+|++
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~---~~~~V~~vD~s~~ai~~a~~n~~~n~l~--~~v~~~~~D~~~~~---~~fD~Vi~ 264 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK---NAKKIYAIDINPHAIELLKKNIKLNKLE--HKIIPILSDVREVD---VKGNRVIM 264 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT---TSSEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEESCGGGCC---CCEEEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc---CCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEECChHHhc---CCCcEEEE
Confidence 4678999999999999998 75 2568999999999999999998765432 47999999998865 67999999
Q ss_pred cccccCcccHHHHHHHHhcccCCCcEEEEEecCC
Q 027517 113 GYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 113 ~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
..... ...+++.+.+.|+|||.+++.+...
T Consensus 265 dpP~~----~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 265 NLPKF----AHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp CCTTT----GGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred CCcHh----HHHHHHHHHHHcCCCCEEEEEEeec
Confidence 64322 2367888999999999998876654
No 243
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.44 E-value=4.2e-12 Score=101.53 Aligned_cols=112 Identities=19% Similarity=0.342 Sum_probs=84.8
Q ss_pred HHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc
Q 027517 21 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL 100 (222)
Q Consensus 21 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 100 (222)
.+...+.+.+...++.+|||+|||+|.++..+++. ..+|+++|+|+++++.|+++....+. .++.++++|+.+.
T Consensus 273 ~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~---~~v~f~~~d~~~~ 346 (433)
T 1uwv_A 273 KMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGL---QNVTFYHENLEED 346 (433)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEECCTTSC
T ss_pred HHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCC---CceEEEECCHHHH
Confidence 34455666666677889999999999999999965 46899999999999999998765442 4899999999872
Q ss_pred ----CCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEE
Q 027517 101 ----PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 101 ----~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~ 142 (222)
+++.++||+|+++...... ..+++.+.+ ++|++.+++.
T Consensus 347 l~~~~~~~~~fD~Vv~dPPr~g~---~~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 347 VTKQPWAKNGFDKVLLDPARAGA---AGVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp CSSSGGGTTCCSEEEECCCTTCC---HHHHHHHHH-HCCSEEEEEE
T ss_pred hhhhhhhcCCCCEEEECCCCccH---HHHHHHHHh-cCCCeEEEEE
Confidence 2345679999996654433 245555543 6888888775
No 244
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.42 E-value=2.4e-12 Score=101.39 Aligned_cols=107 Identities=21% Similarity=0.250 Sum_probs=85.3
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC----CCCceeE
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF----SDCFFDA 109 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~~D~ 109 (222)
++.+|||+|||+|.++..+++. ..+|+++|+++.+++.++++....+. .++.++++|+.+... ...+||+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~---~~~~~~~~d~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGL---GNVRVLEANAFDLLRRLEKEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTC---TTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCC---CCceEEECCHHHHHHHHHhcCCCeeE
Confidence 6779999999999999999976 35899999999999999998865543 358999999877421 1467999
Q ss_pred EEEcccccCc---------ccHHHHHHHHhcccCCCcEEEEEecCC
Q 027517 110 ITMGYGLRNV---------VDKRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 110 v~~~~~l~~~---------~~~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
|++....... .....++..+.+.|+|||.+++.+...
T Consensus 283 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 283 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 9996543221 335678999999999999998876543
No 245
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.42 E-value=7.6e-13 Score=104.75 Aligned_cols=110 Identities=18% Similarity=0.223 Sum_probs=86.3
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC----CCCcee
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF----SDCFFD 108 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~~D 108 (222)
.++.+|||+|||+|.++..+++. ...+|+++|+++.+++.++++....+.. .++.++++|+.+... ...+||
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~--g~~~v~~vD~s~~~l~~a~~n~~~n~~~--~~v~~~~~d~~~~~~~~~~~~~~fD 291 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIA--GADEVIGIDKSPRAIETAKENAKLNGVE--DRMKFIVGSAFEEMEKLQKKGEKFD 291 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCG--GGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCC--ccceEEECCHHHHHHHHHhhCCCCC
Confidence 36789999999999999999875 2348999999999999999988655432 278999999876421 246799
Q ss_pred EEEEcccccCc---------ccHHHHHHHHhcccCCCcEEEEEecCC
Q 027517 109 AITMGYGLRNV---------VDKRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 109 ~v~~~~~l~~~---------~~~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
+|++....... .+...++..+.+.|+|||.+++.+...
T Consensus 292 ~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 292 IVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp EEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 99996543322 345678999999999999998876554
No 246
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.41 E-value=1.1e-12 Score=110.33 Aligned_cols=110 Identities=17% Similarity=0.197 Sum_probs=86.4
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-CCCCCceeEEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-PFSDCFFDAIT 111 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~v~ 111 (222)
.++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.++++....+.. ..+++++++|+.+. +...++||+|+
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~-g-a~~V~aVD~s~~al~~a~~N~~~ngl~-~~~v~~i~~D~~~~l~~~~~~fD~Ii 614 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLG-G-ARSTTTVDMSRTYLEWAERNLRLNGLT-GRAHRLIQADCLAWLREANEQFDLIF 614 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCC-STTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred cCCCcEEEeeechhHHHHHHHHC-C-CCEEEEEeCCHHHHHHHHHHHHHcCCC-ccceEEEecCHHHHHHhcCCCccEEE
Confidence 36789999999999999998864 2 346999999999999999998765431 03799999999873 33456899999
Q ss_pred Ecccc-----------cCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 112 MGYGL-----------RNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 112 ~~~~l-----------~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
+.... ....+...+++.+.++|+|||.+++.+..
T Consensus 615 ~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 615 IDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp ECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 86642 22245678899999999999999977655
No 247
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.41 E-value=1e-12 Score=100.10 Aligned_cols=93 Identities=27% Similarity=0.308 Sum_probs=70.7
Q ss_pred hhHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCC
Q 027517 19 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 98 (222)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~ 98 (222)
+..+.+.+++.+...++.+|||+|||+|.++..+++. +.+++++|+++.+++.++++....+. ++++++++|+.
T Consensus 27 ~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~---~~v~~~~~D~~ 100 (299)
T 2h1r_A 27 NPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGY---NNLEVYEGDAI 100 (299)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTC---CCEEC----CC
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEECchh
Confidence 3445566777777778889999999999999999865 45899999999999999988753322 58999999998
Q ss_pred CcCCCCCceeEEEEcccccCc
Q 027517 99 DLPFSDCFFDAITMGYGLRNV 119 (222)
Q Consensus 99 ~~~~~~~~~D~v~~~~~l~~~ 119 (222)
+++. ++||+|+++...+..
T Consensus 101 ~~~~--~~~D~Vv~n~py~~~ 119 (299)
T 2h1r_A 101 KTVF--PKFDVCTANIPYKIS 119 (299)
T ss_dssp SSCC--CCCSEEEEECCGGGH
T ss_pred hCCc--ccCCEEEEcCCcccc
Confidence 8764 379999998765533
No 248
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.41 E-value=3.6e-12 Score=101.69 Aligned_cols=113 Identities=23% Similarity=0.234 Sum_probs=85.8
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 99 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 99 (222)
+...+.+.+.+...++.+|||+|||+|.++..+++..++..+++|+|+++.+++.| .++.+.++|+.+
T Consensus 25 ~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a------------~~~~~~~~D~~~ 92 (421)
T 2ih2_A 25 PEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP------------PWAEGILADFLL 92 (421)
T ss_dssp HHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC------------TTEEEEESCGGG
T ss_pred HHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC------------CCCcEEeCChhh
Confidence 34445666666555567999999999999999998764557999999999988665 268899999887
Q ss_pred cCCCCCceeEEEEcccccCcc----------c-------------------HHHHHHHHhcccCCCcEEEEEecC
Q 027517 100 LPFSDCFFDAITMGYGLRNVV----------D-------------------KRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 100 ~~~~~~~~D~v~~~~~l~~~~----------~-------------------~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
... .++||+|+++-.+.... + ...+++.+.+.|+|||.++++.+.
T Consensus 93 ~~~-~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 93 WEP-GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp CCC-SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred cCc-cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 643 36799999975543221 1 125688999999999999887644
No 249
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.41 E-value=1.7e-12 Score=98.09 Aligned_cols=91 Identities=25% Similarity=0.348 Sum_probs=76.7
Q ss_pred hhHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCC
Q 027517 19 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 98 (222)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~ 98 (222)
...+.+.+++.+...++.+|||||||+|.++..+++. ..+|+++|+++++++.++++... .++++++++|+.
T Consensus 35 d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~~-----~~~v~vi~gD~l 106 (295)
T 3gru_A 35 DKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKEL-----YNNIEIIWGDAL 106 (295)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHHH-----CSSEEEEESCTT
T ss_pred CHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhcc-----CCCeEEEECchh
Confidence 4455667777778888899999999999999999987 45899999999999999988752 258999999999
Q ss_pred CcCCCCCceeEEEEccccc
Q 027517 99 DLPFSDCFFDAITMGYGLR 117 (222)
Q Consensus 99 ~~~~~~~~~D~v~~~~~l~ 117 (222)
+++++..+||.|+++..++
T Consensus 107 ~~~~~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 107 KVDLNKLDFNKVVANLPYQ 125 (295)
T ss_dssp TSCGGGSCCSEEEEECCGG
T ss_pred hCCcccCCccEEEEeCccc
Confidence 8877666799999887654
No 250
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.40 E-value=1.5e-11 Score=93.71 Aligned_cols=117 Identities=18% Similarity=0.226 Sum_probs=86.8
Q ss_pred HHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCC-
Q 027517 26 AVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD- 104 (222)
Q Consensus 26 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~- 104 (222)
+...+...++.+|||+|||+|..+.++++.+++.++|+++|+++.+++.+++++...+. .++.+++.|+.+++...
T Consensus 94 ~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~---~~v~~~~~D~~~~~~~~~ 170 (309)
T 2b9e_A 94 PAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV---SCCELAEEDFLAVSPSDP 170 (309)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEECCGGGSCTTCG
T ss_pred HHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CeEEEEeCChHhcCcccc
Confidence 34455677889999999999999999999876667999999999999999999876553 47999999988764321
Q ss_pred --CceeEEEEccc------ccCcc-----------c-------HHHHHHHHhcccCCCcEEEEEecCC
Q 027517 105 --CFFDAITMGYG------LRNVV-----------D-------KRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 105 --~~~D~v~~~~~------l~~~~-----------~-------~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
.+||.|++... +..-+ + ...+|+...++++ ||+|+..+-+.
T Consensus 171 ~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 171 RYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp GGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred ccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 47999997322 21111 1 1346778888887 89887765443
No 251
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.35 E-value=1.2e-13 Score=102.35 Aligned_cols=115 Identities=16% Similarity=0.195 Sum_probs=85.6
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 99 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 99 (222)
......+++.+...++.+|||+|||+|.++..+++. +.+++++|+++.+++.++++... ..+++++++|+.+
T Consensus 15 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~---~~~v~~id~~~~~~~~a~~~~~~-----~~~v~~~~~D~~~ 86 (245)
T 1yub_A 15 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI---SKQVTSIELDSHLFNLSSEKLKL-----NTRVTLIHQDILQ 86 (245)
T ss_dssp TTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH---SSEEEESSSSCSSSSSSSCTTTT-----CSEEEECCSCCTT
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh---CCeEEEEECCHHHHHHHHHHhcc-----CCceEEEECChhh
Confidence 334456667777778889999999999999999987 36899999999999999887641 1579999999998
Q ss_pred cCCCC-CceeEEEEcccccCcc-----------cHHHHH----HHHhcccCCCcEEEEEe
Q 027517 100 LPFSD-CFFDAITMGYGLRNVV-----------DKRKAL----EESFRVLKPGSRISVLD 143 (222)
Q Consensus 100 ~~~~~-~~~D~v~~~~~l~~~~-----------~~~~~l----~~~~~~l~~gG~l~i~~ 143 (222)
++++. ++| .|+++...+... .....+ +.+.++|+|||.+.+..
T Consensus 87 ~~~~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 87 FQFPNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp TTCCCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred cCcccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 87653 578 677765443221 111223 56888999999877644
No 252
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.34 E-value=1.3e-11 Score=96.95 Aligned_cols=123 Identities=16% Similarity=0.153 Sum_probs=93.2
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhC-------------------------------------CCCcE
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVG-------------------------------------SQGKV 62 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-------------------------------------~~~~~ 62 (222)
......++......++..|||++||+|.++..++.... ...++
T Consensus 181 e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 260 (385)
T 3ldu_A 181 ETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKI 260 (385)
T ss_dssp HHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCE
T ss_pred HHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceE
Confidence 34555666777777889999999999999988876531 11479
Q ss_pred EEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEEcccccCc----ccHHHHHHHHhcccCC--C
Q 027517 63 IGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNV----VDKRKALEESFRVLKP--G 136 (222)
Q Consensus 63 ~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~l~~--g 136 (222)
+|+|+++.+++.|++++...+.. .++++.+.|+.+++.+ .+||+|+++-.+..- ++...+.+.+.+.|++ |
T Consensus 261 ~GvDid~~ai~~Ar~Na~~~gl~--~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g 337 (385)
T 3ldu_A 261 YGYDIDEESIDIARENAEIAGVD--EYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKN 337 (385)
T ss_dssp EEEESCHHHHHHHHHHHHHHTCG--GGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBS
T ss_pred EEEECCHHHHHHHHHHHHHcCCC--CceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCC
Confidence 99999999999999998765532 3799999999987654 589999998886533 2345566767777766 8
Q ss_pred cEEEEEecC
Q 027517 137 SRISVLDFN 145 (222)
Q Consensus 137 G~l~i~~~~ 145 (222)
+.+++.+..
T Consensus 338 ~~~~iit~~ 346 (385)
T 3ldu_A 338 WSYYLITSY 346 (385)
T ss_dssp CEEEEEESC
T ss_pred CEEEEEECC
Confidence 888877543
No 253
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.34 E-value=1.8e-11 Score=96.36 Aligned_cols=123 Identities=15% Similarity=0.082 Sum_probs=91.4
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCC-------------------------------------CCcE
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGS-------------------------------------QGKV 62 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~-------------------------------------~~~~ 62 (222)
......++......++..|||++||+|.++..++..... ..++
T Consensus 187 e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 266 (393)
T 3k0b_A 187 ETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNI 266 (393)
T ss_dssp HHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceE
Confidence 344456667777788889999999999998877765321 1469
Q ss_pred EEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEEcccccCc----ccHHHHHHHHhcccCC--C
Q 027517 63 IGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNV----VDKRKALEESFRVLKP--G 136 (222)
Q Consensus 63 ~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~l~~--g 136 (222)
+|+|+++.+++.|++++...+.. .++.+.+.|+.+++.+ .+||+|+++-.+..- .+...+.+.+.+.|++ |
T Consensus 267 ~GvDid~~al~~Ar~Na~~~gl~--~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g 343 (393)
T 3k0b_A 267 IGGDIDARLIEIAKQNAVEAGLG--DLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPT 343 (393)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCT--TCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred EEEECCHHHHHHHHHHHHHcCCC--CceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCC
Confidence 99999999999999998765532 4699999999987654 579999999775432 2234455656666655 8
Q ss_pred cEEEEEecC
Q 027517 137 SRISVLDFN 145 (222)
Q Consensus 137 G~l~i~~~~ 145 (222)
|.+++.+..
T Consensus 344 ~~~~iit~~ 352 (393)
T 3k0b_A 344 WSVYVLTSY 352 (393)
T ss_dssp CEEEEEECC
T ss_pred CEEEEEECC
Confidence 888887653
No 254
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.33 E-value=6e-12 Score=101.03 Aligned_cols=124 Identities=20% Similarity=0.221 Sum_probs=93.2
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhC------------CCCcEEEEeCChhHHHHHhcchhhhhhhcC
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVG------------SQGKVIGLDFSKNQLSMASSRQDLVSKACY 87 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (222)
+...+.+++.+...++.+|||.|||+|.++..+++.+. ...+++|+|+++.+++.|+.++...+...
T Consensus 157 ~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~- 235 (445)
T 2okc_A 157 RPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGT- 235 (445)
T ss_dssp HHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCS-
T ss_pred HHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCc-
Confidence 34455666777767788999999999999988887541 13579999999999999998765433210
Q ss_pred CCeeEEeCCCCCcCCCCCceeEEEEcccccCccc-----------------HHHHHHHHhcccCCCcEEEEEecC
Q 027517 88 KNIEWVEGDALDLPFSDCFFDAITMGYGLRNVVD-----------------KRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 88 ~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~-----------------~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
.++.+.++|....+.. .+||+|+++.++..... ...+++++.+.|+|||++.++.+.
T Consensus 236 ~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 236 DRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp SCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred CCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 1678899998775543 47999999987765421 137899999999999999887653
No 255
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.33 E-value=3e-11 Score=94.71 Aligned_cols=123 Identities=13% Similarity=0.065 Sum_probs=93.2
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCC-------------------------------------CCcE
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGS-------------------------------------QGKV 62 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~-------------------------------------~~~~ 62 (222)
......++......++..++|.+||+|.++...+..... ..++
T Consensus 180 e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v 259 (384)
T 3ldg_A 180 ENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDI 259 (384)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceE
Confidence 345566677777788899999999999999877765321 1469
Q ss_pred EEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEEcccccCc----ccHHHHHHHHhcccCC--C
Q 027517 63 IGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNV----VDKRKALEESFRVLKP--G 136 (222)
Q Consensus 63 ~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~l~~--g 136 (222)
+|+|+++.+++.|++++...+.. .++.+.+.|+.+++.+ .+||+|+++-.+..- .+...+.+.+.+.||+ |
T Consensus 260 ~GvDid~~al~~Ar~Na~~~gl~--~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g 336 (384)
T 3ldg_A 260 SGFDFDGRMVEIARKNAREVGLE--DVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKT 336 (384)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCT--TTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTT
T ss_pred EEEECCHHHHHHHHHHHHHcCCC--CceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCC
Confidence 99999999999999998765543 4699999999987754 479999999776532 2345666666666666 8
Q ss_pred cEEEEEecC
Q 027517 137 SRISVLDFN 145 (222)
Q Consensus 137 G~l~i~~~~ 145 (222)
|.+++....
T Consensus 337 ~~~~iit~~ 345 (384)
T 3ldg_A 337 WSQFILTND 345 (384)
T ss_dssp SEEEEEESC
T ss_pred cEEEEEECC
Confidence 988887653
No 256
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.32 E-value=2.6e-11 Score=96.39 Aligned_cols=100 Identities=18% Similarity=0.250 Sum_probs=77.2
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEE
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 111 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~ 111 (222)
..++.+|||+|||+|.++..+++. ..+|+++|+++.+++.++++....+. . +.++++|+.+... .+||+|+
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl---~-v~~~~~d~~~~~~--~~fD~Vv 358 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNV---D-AEFEVASDREVSV--KGFDTVI 358 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTC---C-EEEEECCTTTCCC--TTCSEEE
T ss_pred cCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCC---c-EEEEECChHHcCc--cCCCEEE
Confidence 456789999999999999999875 45899999999999999998765432 3 8999999988642 2799999
Q ss_pred EcccccCcccHHHHHHHHhcccCCCcEEEEEe
Q 027517 112 MGYGLRNVVDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 112 ~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
+...-.... ..+++.+. .|+|+|.+++.+
T Consensus 359 ~dPPr~g~~--~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 359 VDPPRAGLH--PRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp ECCCTTCSC--HHHHHHHH-HHCCSEEEEEES
T ss_pred EcCCccchH--HHHHHHHH-hcCCCcEEEEEC
Confidence 965532221 34555554 489999998864
No 257
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.30 E-value=7.9e-11 Score=87.06 Aligned_cols=89 Identities=12% Similarity=0.166 Sum_probs=70.0
Q ss_pred hhHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCC
Q 027517 19 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 98 (222)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~ 98 (222)
...+...+++.+...++.+|||+|||+|.++..+++. +.+++++|+++.+++.++++.... ++++++++|+.
T Consensus 15 d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~-----~~v~~~~~D~~ 86 (244)
T 1qam_A 15 SKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR---CNFVTAIEIDHKLCKTTENKLVDH-----DNFQVLNKDIL 86 (244)
T ss_dssp CHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHTTTC-----CSEEEECCCGG
T ss_pred CHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHc---CCeEEEEECCHHHHHHHHHhhccC-----CCeEEEEChHH
Confidence 3455566777777778889999999999999999987 368999999999999999886431 58999999999
Q ss_pred CcCCCC-CceeEEEEcccc
Q 027517 99 DLPFSD-CFFDAITMGYGL 116 (222)
Q Consensus 99 ~~~~~~-~~~D~v~~~~~l 116 (222)
+++++. .+| .|+++..+
T Consensus 87 ~~~~~~~~~~-~vv~nlPy 104 (244)
T 1qam_A 87 QFKFPKNQSY-KIFGNIPY 104 (244)
T ss_dssp GCCCCSSCCC-EEEEECCG
T ss_pred hCCcccCCCe-EEEEeCCc
Confidence 887653 345 45555444
No 258
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.29 E-value=3.6e-12 Score=98.02 Aligned_cols=109 Identities=13% Similarity=0.061 Sum_probs=79.1
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhh-----cCCCeeEEeCCCCCcCC----C
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA-----CYKNIEWVEGDALDLPF----S 103 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-----~~~~i~~~~~d~~~~~~----~ 103 (222)
+++.+||+||||+|..+..+++. ++ .+++++|+++.+++.+++++...... ..++++++.+|+..... .
T Consensus 187 p~pkrVL~IGgG~G~~arellk~-~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~ 264 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKL-KP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 264 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-CC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEEECChhHHHHHHHHC-CC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhcc
Confidence 35679999999999999999887 34 68999999999999999987532110 01379999999887431 2
Q ss_pred CCceeEEEEcccc---cCcc---cHHHHHHHH----hcccCCCcEEEEEe
Q 027517 104 DCFFDAITMGYGL---RNVV---DKRKALEES----FRVLKPGSRISVLD 143 (222)
Q Consensus 104 ~~~~D~v~~~~~l---~~~~---~~~~~l~~~----~~~l~~gG~l~i~~ 143 (222)
.++||+|++...- ..-+ -...+++.+ +++|+|||.+++..
T Consensus 265 ~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 265 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 4679999986542 1111 124555555 89999999998753
No 259
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.28 E-value=1.5e-11 Score=91.15 Aligned_cols=89 Identities=18% Similarity=0.229 Sum_probs=71.8
Q ss_pred hhHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCC
Q 027517 19 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 98 (222)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~ 98 (222)
+..+...+++.+...++.+|||||||+|.++..+++. ..+++++|+++++++.++++... .++++++++|+.
T Consensus 14 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~-----~~~v~~i~~D~~ 85 (255)
T 3tqs_A 14 DSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQ-----QKNITIYQNDAL 85 (255)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTT-----CTTEEEEESCTT
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhh-----CCCcEEEEcchH
Confidence 3455567778888888999999999999999999976 36899999999999999988754 158999999999
Q ss_pred CcCCC----CCceeEEEEcccc
Q 027517 99 DLPFS----DCFFDAITMGYGL 116 (222)
Q Consensus 99 ~~~~~----~~~~D~v~~~~~l 116 (222)
+++++ .++|| |+++...
T Consensus 86 ~~~~~~~~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 86 QFDFSSVKTDKPLR-VVGNLPY 106 (255)
T ss_dssp TCCGGGSCCSSCEE-EEEECCH
T ss_pred hCCHHHhccCCCeE-EEecCCc
Confidence 87653 24688 6665544
No 260
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.26 E-value=2.6e-11 Score=90.57 Aligned_cols=91 Identities=19% Similarity=0.115 Sum_probs=74.4
Q ss_pred hhHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCC
Q 027517 19 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 98 (222)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~ 98 (222)
+..+.+.+++.+...++ +|||+|||+|.++..+++. +.+|+++|+++++++.++++... .+++++++|+.
T Consensus 32 d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~---~~~V~avEid~~~~~~l~~~~~~------~~v~vi~~D~l 101 (271)
T 3fut_A 32 SEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA---GAEVTAIEKDLRLRPVLEETLSG------LPVRLVFQDAL 101 (271)
T ss_dssp CHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT---TCCEEEEESCGGGHHHHHHHTTT------SSEEEEESCGG
T ss_pred CHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcCC------CCEEEEECChh
Confidence 34566777888888888 9999999999999999986 35899999999999999988641 48999999999
Q ss_pred CcCCCC-CceeEEEEcccccCc
Q 027517 99 DLPFSD-CFFDAITMGYGLRNV 119 (222)
Q Consensus 99 ~~~~~~-~~~D~v~~~~~l~~~ 119 (222)
+++++. ..+|.|+++...+--
T Consensus 102 ~~~~~~~~~~~~iv~NlPy~is 123 (271)
T 3fut_A 102 LYPWEEVPQGSLLVANLPYHIA 123 (271)
T ss_dssp GSCGGGSCTTEEEEEEECSSCC
T ss_pred hCChhhccCccEEEecCccccc
Confidence 877643 258999988766543
No 261
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.23 E-value=2.9e-10 Score=88.43 Aligned_cols=176 Identities=14% Similarity=0.074 Sum_probs=98.7
Q ss_pred CCeEEEecCCCChhHHHHHH--------Hh------CCCCcEEEEeCChhHHHHHhcchhhhh-----------hhcCCC
Q 027517 35 GDNVLDVCCGSGDLSFLLSE--------QV------GSQGKVIGLDFSKNQLSMASSRQDLVS-----------KACYKN 89 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~--------~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~-----------~~~~~~ 89 (222)
..+|+|+|||+|..+..+.. .. .+..+|..-|+.....+..=+.+.... ....+.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 46899999999999887622 21 144578888976654433222221110 000011
Q ss_pred -eeEEeCCCCCcCCCCCceeEEEEcccccCcc--------------------------------------cHHHHHHHHh
Q 027517 90 -IEWVEGDALDLPFSDCFFDAITMGYGLRNVV--------------------------------------DKRKALEESF 130 (222)
Q Consensus 90 -i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~--------------------------------------~~~~~l~~~~ 130 (222)
+.-+.+....-.+|++++|+|+++.++|+++ |...+|+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1223344444457788999999999999986 2334688889
Q ss_pred cccCCCcEEEEEecCCCCCchhh-----HHH-HHHhhcccccccccCChhHHHHHhHHhHhhcCCHHHHHHHHH-HcCCe
Q 027517 131 RVLKPGSRISVLDFNKSTQPFTT-----AIQ-EWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLAL-EIGFS 203 (222)
Q Consensus 131 ~~l~~gG~l~i~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gf~ 203 (222)
+.|+|||++++......+..... ... ..+...+..-...+....+..... .....+.+.+|+..+++ +.||+
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f-~~P~y~ps~~E~~~~l~~~~~F~ 291 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGF-NIPVYAPSLQDFKEVVDANGSFA 291 (374)
T ss_dssp HHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSC-CCCBCCCCHHHHHHHHHHHCSEE
T ss_pred HHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccC-CccccCCCHHHHHHHHHhcCCcE
Confidence 99999999999888775532111 000 001000000000000000000000 01124579999999998 59999
Q ss_pred EEEEeeec
Q 027517 204 RAKHYELS 211 (222)
Q Consensus 204 ~~~~~~~~ 211 (222)
+.....+.
T Consensus 292 I~~le~~~ 299 (374)
T 3b5i_A 292 IDKLVVYK 299 (374)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 87765443
No 262
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.23 E-value=1.2e-10 Score=87.31 Aligned_cols=111 Identities=14% Similarity=0.086 Sum_probs=84.2
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhh--hhcCCCeeEEeCCCCCc-CCCCCcee
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVS--KACYKNIEWVEGDALDL-PFSDCFFD 108 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~d~~~~-~~~~~~~D 108 (222)
.+..++||-||.|.|..+..+++. .+..+++.+|+++..++.+++.+.... ....++++++.+|.... ....++||
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~-~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yD 159 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRH-KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTC-TTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEE
T ss_pred CCCCCeEEEECCCchHHHHHHHHc-CCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCC
Confidence 455679999999999999999987 345689999999999999998874321 11227899999999874 33457899
Q ss_pred EEEEcccccCcc----cHHHHHHHHhcccCCCcEEEEEe
Q 027517 109 AITMGYGLRNVV----DKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 109 ~v~~~~~l~~~~----~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
+|+.-..-..-+ -...+++.+++.|+|||.++...
T Consensus 160 vIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 160 VIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 999744311111 12578999999999999998753
No 263
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.20 E-value=8.2e-11 Score=96.31 Aligned_cols=124 Identities=14% Similarity=0.082 Sum_probs=90.6
Q ss_pred HHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCC-----------------CCcEEEEeCChhHHHHHhcchhhhhh
Q 027517 22 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGS-----------------QGKVIGLDFSKNQLSMASSRQDLVSK 84 (222)
Q Consensus 22 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~-----------------~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (222)
..+.+++.+...++.+|+|.|||+|.++..+.+.+.. ...++|+|+++.++..|+.++...+.
T Consensus 157 iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi 236 (541)
T 2ar0_A 157 LIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDI 236 (541)
T ss_dssp HHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCC
Confidence 4455667776677889999999999999888776421 13799999999999999987644332
Q ss_pred hc--CCCeeEEeCCCCCcC-CCCCceeEEEEcccccCccc--------------HHHHHHHHhcccCCCcEEEEEecC
Q 027517 85 AC--YKNIEWVEGDALDLP-FSDCFFDAITMGYGLRNVVD--------------KRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 85 ~~--~~~i~~~~~d~~~~~-~~~~~~D~v~~~~~l~~~~~--------------~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
.. ..++.+.++|....+ ....+||+|+++-++..... ...+++++.+.|+|||++.++.+.
T Consensus 237 ~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~ 314 (541)
T 2ar0_A 237 EGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPD 314 (541)
T ss_dssp CCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred CccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 10 002678889977643 23467999999887664422 236899999999999999887654
No 264
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.20 E-value=4.9e-11 Score=90.45 Aligned_cols=90 Identities=19% Similarity=0.265 Sum_probs=73.1
Q ss_pred HHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC
Q 027517 22 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP 101 (222)
Q Consensus 22 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 101 (222)
+...+++.+...++.+|||+|||+|..+..+++.+ ++.+++++|.|+.+++.+++++...+ .++.++++|+.+++
T Consensus 14 Ll~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~-~~~~VigvD~d~~al~~A~~~~~~~g----~~v~~v~~d~~~l~ 88 (301)
T 1m6y_A 14 MVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHC-PGCRIIGIDVDSEVLRIAEEKLKEFS----DRVSLFKVSYREAD 88 (301)
T ss_dssp THHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTGGGT----TTEEEEECCGGGHH
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcC----CcEEEEECCHHHHH
Confidence 44566677777888999999999999999999986 36799999999999999999876543 48999999988764
Q ss_pred --CC---CCceeEEEEcccc
Q 027517 102 --FS---DCFFDAITMGYGL 116 (222)
Q Consensus 102 --~~---~~~~D~v~~~~~l 116 (222)
.. ..+||.|++....
T Consensus 89 ~~l~~~g~~~~D~Vl~D~gv 108 (301)
T 1m6y_A 89 FLLKTLGIEKVDGILMDLGV 108 (301)
T ss_dssp HHHHHTTCSCEEEEEEECSC
T ss_pred HHHHhcCCCCCCEEEEcCcc
Confidence 11 1479999986543
No 265
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=99.16 E-value=2.4e-10 Score=88.97 Aligned_cols=161 Identities=12% Similarity=0.070 Sum_probs=95.0
Q ss_pred CCeEEEecCCCChhHHHHHHH-------------h---CCCCcEEEEeCC-----------hhHHHHHhcchhhhhhhcC
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQ-------------V---GSQGKVIGLDFS-----------KNQLSMASSRQDLVSKACY 87 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~-------------~---~~~~~~~~~D~~-----------~~~~~~~~~~~~~~~~~~~ 87 (222)
..+|+|+||++|..+..+... . .|..+|+..|+. +...+..++.. +..
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~---g~~-- 127 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKEN---GRK-- 127 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHT---CCC--
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhc---cCC--
Confidence 468999999999999877665 1 134477888876 22222221111 000
Q ss_pred CCeeEEeCC---CCCcCCCCCceeEEEEcccccCcccHH---------------------------------------HH
Q 027517 88 KNIEWVEGD---ALDLPFSDCFFDAITMGYGLRNVVDKR---------------------------------------KA 125 (222)
Q Consensus 88 ~~i~~~~~d---~~~~~~~~~~~D~v~~~~~l~~~~~~~---------------------------------------~~ 125 (222)
.+..++.+. +..-.+|.+++|+|+++.++||+.+.+ .+
T Consensus 128 ~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~F 207 (384)
T 2efj_A 128 IGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTF 207 (384)
T ss_dssp TTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 123444443 333457889999999999999985432 12
Q ss_pred HHHHhcccCCCcEEEEEecCCCCC--c------hhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcCCHHHHHHHH
Q 027517 126 LEESFRVLKPGSRISVLDFNKSTQ--P------FTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLA 197 (222)
Q Consensus 126 l~~~~~~l~~gG~l~i~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 197 (222)
|+..++.|+|||++++......+. . ....+.....+..... +..... .....+.+.+|++.++
T Consensus 208 L~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~--------ek~dsf-~~P~y~ps~~E~~~~l 278 (384)
T 2efj_A 208 LRIHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEE--------EKLDSF-NVPIYAPSTEEVKRIV 278 (384)
T ss_dssp HHHHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCH--------HHHHTC-CCSBCCCCHHHHHHHH
T ss_pred HHHHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcch--------hhhccc-CCcccCCCHHHHHHHH
Confidence 566689999999999998887664 2 1122222111110000 000000 0113467999999999
Q ss_pred HHcC-CeEEEEee
Q 027517 198 LEIG-FSRAKHYE 209 (222)
Q Consensus 198 ~~~G-f~~~~~~~ 209 (222)
++.| |++.....
T Consensus 279 e~~g~F~i~~le~ 291 (384)
T 2efj_A 279 EEEGSFEILYLET 291 (384)
T ss_dssp HHHCSEEEEEEEE
T ss_pred HHcCCceEEEEEE
Confidence 9985 78776543
No 266
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.16 E-value=6.2e-11 Score=92.79 Aligned_cols=102 Identities=19% Similarity=0.160 Sum_probs=81.0
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhh---------------hhhcCCCeeEEeCCCC
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLV---------------SKACYKNIEWVEGDAL 98 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~---------------~~~~~~~i~~~~~d~~ 98 (222)
++.+|||+|||+|..+..+++.. +..+|+++|+++++++.+++++... +. .+++++++|+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~-~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl---~~i~v~~~Da~ 122 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALET-PAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE---KTIVINHDDAN 122 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHS-SCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS---SEEEEEESCHH
T ss_pred CCCEEEECCCchhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC---CceEEEcCcHH
Confidence 67899999999999999999885 3458999999999999999998765 32 34899999987
Q ss_pred CcCC-CCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEe
Q 027517 99 DLPF-SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 99 ~~~~-~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
++.. ..++||+|++.- . .....+++.+.+.+++||.++++.
T Consensus 123 ~~~~~~~~~fD~I~lDP-~---~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 123 RLMAERHRYFHFIDLDP-F---GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHHSTTCEEEEEECC-S---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHhccCCCCEEEeCC-C---CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 6421 135799999643 2 123678888999999999888765
No 267
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.16 E-value=1.2e-09 Score=92.07 Aligned_cols=123 Identities=16% Similarity=0.122 Sum_probs=88.9
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHh-----------------------------------------CC
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQV-----------------------------------------GS 58 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-----------------------------------------~~ 58 (222)
......++......++..|||.+||+|.++...+... .+
T Consensus 176 e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~ 255 (703)
T 3v97_A 176 ETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEY 255 (703)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccC
Confidence 3455666777777788899999999999988776542 01
Q ss_pred CCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCC--CCceeEEEEcccccCc----ccHHHHHHHH---
Q 027517 59 QGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS--DCFFDAITMGYGLRNV----VDKRKALEES--- 129 (222)
Q Consensus 59 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~--~~~~D~v~~~~~l~~~----~~~~~~l~~~--- 129 (222)
..+++|+|+++.+++.|+.++...+.. ..+.+.++|+.++..+ .++||+|+++-.+..- ++...+.+.+
T Consensus 256 ~~~i~G~Did~~av~~A~~N~~~agv~--~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~ 333 (703)
T 3v97_A 256 SSHFYGSDSDARVIQRARTNARLAGIG--ELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRI 333 (703)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHTTCG--GGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHH
T ss_pred CccEEEEECCHHHHHHHHHHHHHcCCC--CceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHH
Confidence 247999999999999999998766543 3589999999886433 3379999999776432 2233444444
Q ss_pred hcccCCCcEEEEEec
Q 027517 130 FRVLKPGSRISVLDF 144 (222)
Q Consensus 130 ~~~l~~gG~l~i~~~ 144 (222)
.+.+.|||.+++...
T Consensus 334 lk~~~~g~~~~ilt~ 348 (703)
T 3v97_A 334 MKNQFGGWNLSLFSA 348 (703)
T ss_dssp HHHHCTTCEEEEEES
T ss_pred HHhhCCCCeEEEEeC
Confidence 444558999988743
No 268
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.15 E-value=7.1e-11 Score=92.54 Aligned_cols=104 Identities=16% Similarity=0.052 Sum_probs=82.0
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCC-CcEEEEeCChhHHHHHhcchhhhhhhcCCC-eeEEeCCCCCcC--CCCCcee
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQ-GKVIGLDFSKNQLSMASSRQDLVSKACYKN-IEWVEGDALDLP--FSDCFFD 108 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~d~~~~~--~~~~~~D 108 (222)
.++.+|||++||+|.++..++... .+ .+|+++|+++.+++.+++++...+.. .+ ++++++|+.++. ...++||
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~-~ga~~V~avDi~~~av~~~~~N~~~Ngl~--~~~v~v~~~Da~~~l~~~~~~~fD 127 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLET-SCVEKAYANDISSKAIEIMKENFKLNNIP--EDRYEIHGMEANFFLRKEWGFGFD 127 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHC-SCEEEEEEECSCHHHHHHHHHHHHHTTCC--GGGEEEECSCHHHHHHSCCSSCEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHHHHHhCCC--CceEEEEeCCHHHHHHHhhCCCCc
Confidence 457899999999999999999874 23 48999999999999999998766532 23 899999987642 2235799
Q ss_pred EEEEcccccCcccHHHHHHHHhcccCCCcEEEEEe
Q 027517 109 AITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 109 ~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
+|++.- . .....+++.+.+.|+|||.++++.
T Consensus 128 ~V~lDP-~---g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 128 YVDLDP-F---GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEECC-S---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECC-C---cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 999865 2 223568888899999999888876
No 269
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.14 E-value=1.9e-10 Score=86.43 Aligned_cols=90 Identities=14% Similarity=0.168 Sum_probs=69.3
Q ss_pred hhHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCC-CCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCC
Q 027517 19 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGS-QGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA 97 (222)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~ 97 (222)
+..+.+.+++.+...++.+|||||||+|.++..+++.... ..+++++|+++++++.++++. . .+++++++|+
T Consensus 27 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~---~----~~v~~i~~D~ 99 (279)
T 3uzu_A 27 DHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF---G----ELLELHAGDA 99 (279)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH---G----GGEEEEESCG
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc---C----CCcEEEECCh
Confidence 3456677778888888999999999999999999988532 234999999999999999883 1 5899999999
Q ss_pred CCcCCCCC------ceeEEEEccc
Q 027517 98 LDLPFSDC------FFDAITMGYG 115 (222)
Q Consensus 98 ~~~~~~~~------~~D~v~~~~~ 115 (222)
.++++++- ..+.|+++..
T Consensus 100 ~~~~~~~~~~~~~~~~~~vv~NlP 123 (279)
T 3uzu_A 100 LTFDFGSIARPGDEPSLRIIGNLP 123 (279)
T ss_dssp GGCCGGGGSCSSSSCCEEEEEECC
T ss_pred hcCChhHhcccccCCceEEEEccC
Confidence 98765321 2345666554
No 270
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.14 E-value=1.8e-10 Score=90.23 Aligned_cols=110 Identities=15% Similarity=0.233 Sum_probs=78.1
Q ss_pred HHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC
Q 027517 22 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP 101 (222)
Q Consensus 22 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 101 (222)
+...+.+..... +.+|||+|||+|.++..+++. ..+|+++|+++.+++.++++....+. .+++++.+|+.+..
T Consensus 202 l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~---~~v~~~~~d~~~~~ 274 (369)
T 3bt7_A 202 MLEWALDVTKGS-KGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHI---DNVQIIRMAAEEFT 274 (369)
T ss_dssp HHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTC---CSEEEECCCSHHHH
T ss_pred HHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEECCHHHHH
Confidence 334555555443 568999999999999988864 35899999999999999998865443 48999999987642
Q ss_pred --CCC--------------CceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 102 --FSD--------------CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 102 --~~~--------------~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
... .+||+|++...-.. +..++.+.|+++|.++.+..
T Consensus 275 ~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g------~~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 275 QAMNGVREFNRLQGIDLKSYQCETIFVDPPRSG------LDSETEKMVQAYPRILYISC 327 (369)
T ss_dssp HHHSSCCCCTTGGGSCGGGCCEEEEEECCCTTC------CCHHHHHHHTTSSEEEEEES
T ss_pred HHHhhccccccccccccccCCCCEEEECcCccc------cHHHHHHHHhCCCEEEEEEC
Confidence 111 27999998543221 22345555668888776643
No 271
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.11 E-value=5.1e-10 Score=82.99 Aligned_cols=109 Identities=17% Similarity=0.105 Sum_probs=72.0
Q ss_pred CCCCeEEEecCCCChhHHHHHHHh------CCC-----CcEEEEeCCh---hHHHH-----------Hhcchhhh-----
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQV------GSQ-----GKVIGLDFSK---NQLSM-----------ASSRQDLV----- 82 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~------~~~-----~~~~~~D~~~---~~~~~-----------~~~~~~~~----- 82 (222)
.+..+|||+|+|+|..+..+++.. .+. .+++++|..+ +.+.. +++.....
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 355699999999999998877654 443 4899999877 44443 33332210
Q ss_pred ------hhhcCCCeeEEeCCCCC-cCCCC----CceeEEEEcc-cccCccc--HHHHHHHHhcccCCCcEEEE
Q 027517 83 ------SKACYKNIEWVEGDALD-LPFSD----CFFDAITMGY-GLRNVVD--KRKALEESFRVLKPGSRISV 141 (222)
Q Consensus 83 ------~~~~~~~i~~~~~d~~~-~~~~~----~~~D~v~~~~-~l~~~~~--~~~~l~~~~~~l~~gG~l~i 141 (222)
-.....++.+..+|+.+ ++... ..||+|+.-. +-..-++ ...+++.+++.|+|||+++.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 00111357789999876 33222 2799999853 2222233 36789999999999999874
No 272
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.11 E-value=6e-10 Score=82.43 Aligned_cols=88 Identities=16% Similarity=0.234 Sum_probs=68.7
Q ss_pred hhHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCC
Q 027517 19 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 98 (222)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~ 98 (222)
+..+.+.+++.+...++.+|||+|||+|.++..+++. +..+++++|+++.+++.++++ . . .+++++++|+.
T Consensus 16 d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~--~~~~v~avEid~~~~~~~~~~-~--~----~~v~~i~~D~~ 86 (249)
T 3ftd_A 16 SEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH--PLKKLYVIELDREMVENLKSI-G--D----ERLEVINEDAS 86 (249)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS--CCSEEEEECCCHHHHHHHTTS-C--C----TTEEEECSCTT
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc--CCCeEEEEECCHHHHHHHHhc-c--C----CCeEEEEcchh
Confidence 3455667777777788899999999999999999875 246899999999999999887 2 1 58999999999
Q ss_pred CcCCCC--CceeEEEEcccc
Q 027517 99 DLPFSD--CFFDAITMGYGL 116 (222)
Q Consensus 99 ~~~~~~--~~~D~v~~~~~l 116 (222)
++++++ +.+ .|+++...
T Consensus 87 ~~~~~~~~~~~-~vv~NlPy 105 (249)
T 3ftd_A 87 KFPFCSLGKEL-KVVGNLPY 105 (249)
T ss_dssp TCCGGGSCSSE-EEEEECCT
T ss_pred hCChhHccCCc-EEEEECch
Confidence 877543 223 55555544
No 273
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=99.09 E-value=2.5e-10 Score=84.52 Aligned_cols=91 Identities=10% Similarity=0.077 Sum_probs=68.1
Q ss_pred hhHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCC
Q 027517 19 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 98 (222)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~ 98 (222)
+..+.+.+++.+...++.+|||||||+|.++. +. . ....+++++|+++++++.++++.... ++++++++|+.
T Consensus 6 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~-~-~~~~~v~avEid~~~~~~a~~~~~~~-----~~v~~i~~D~~ 77 (252)
T 1qyr_A 6 DQFVIDSIVSAINPQKGQAMVEIGPGLAALTE-PV-G-ERLDQLTVIELDRDLAARLQTHPFLG-----PKLTIYQQDAM 77 (252)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HH-H-TTCSCEEEECCCHHHHHHHHTCTTTG-----GGEEEECSCGG
T ss_pred CHHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hh-h-CCCCeEEEEECCHHHHHHHHHHhccC-----CceEEEECchh
Confidence 34455667777777888899999999999999 54 4 22223999999999999999887532 48999999998
Q ss_pred CcCCCC-----CceeEEEEccccc
Q 027517 99 DLPFSD-----CFFDAITMGYGLR 117 (222)
Q Consensus 99 ~~~~~~-----~~~D~v~~~~~l~ 117 (222)
++++++ +..|.|+++...+
T Consensus 78 ~~~~~~~~~~~~~~~~vvsNlPY~ 101 (252)
T 1qyr_A 78 TFNFGELAEKMGQPLRVFGNLPYN 101 (252)
T ss_dssp GCCHHHHHHHHTSCEEEEEECCTT
T ss_pred hCCHHHhhcccCCceEEEECCCCC
Confidence 876432 1346777776543
No 274
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.08 E-value=9.9e-11 Score=87.05 Aligned_cols=87 Identities=17% Similarity=0.142 Sum_probs=66.2
Q ss_pred HHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCCh-------hHHHHHhcchhhhhhhcCCCeeEEeCCCCC
Q 027517 27 VSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSK-------NQLSMASSRQDLVSKACYKNIEWVEGDALD 99 (222)
Q Consensus 27 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 99 (222)
...+...++.+|||+|||+|..+..+++. +.+|+++|+++ ++++.++++....+.. .+++++++|+.+
T Consensus 76 ~~a~~~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~--~ri~~~~~d~~~ 150 (258)
T 2r6z_A 76 AKAVNHTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTA--ARINLHFGNAAE 150 (258)
T ss_dssp HHHTTGGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHH--TTEEEEESCHHH
T ss_pred HHHhCcCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCc--cCeEEEECCHHH
Confidence 33344456789999999999999999875 46899999999 9999998876554432 359999999887
Q ss_pred c-C-CCC--CceeEEEEcccccC
Q 027517 100 L-P-FSD--CFFDAITMGYGLRN 118 (222)
Q Consensus 100 ~-~-~~~--~~~D~v~~~~~l~~ 118 (222)
. + +++ ++||+|++...+.+
T Consensus 151 ~l~~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 151 QMPALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHHHHHHCCCSEEEECCCC--
T ss_pred HHHhhhccCCCccEEEECCCCCC
Confidence 4 2 333 57999999876654
No 275
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=99.05 E-value=1.3e-09 Score=84.26 Aligned_cols=163 Identities=11% Similarity=0.130 Sum_probs=100.8
Q ss_pred CCeEEEecCCCChhHHHHHHH---------------hCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEE---eCC
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQ---------------VGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWV---EGD 96 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~---------------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~d 96 (222)
..+|+|+||++|..+..+... -.|..+|+..|+.....+..-+.+...... .+..+. .+.
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~--~~~~f~~gvpgS 129 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDV--DGVCFINGVPGS 129 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSC--TTCEEEEEEESC
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhccc--CCCEEEEecchh
Confidence 458999999999877654432 124457899999888877776665432100 122333 344
Q ss_pred CCCcCCCCCceeEEEEcccccCcccH---------------------------------HHHHHHHhcccCCCcEEEEEe
Q 027517 97 ALDLPFSDCFFDAITMGYGLRNVVDK---------------------------------RKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 97 ~~~~~~~~~~~D~v~~~~~l~~~~~~---------------------------------~~~l~~~~~~l~~gG~l~i~~ 143 (222)
+..-.+|.+++|+|+++.++|++.+. ..+|+..++.|+|||++++..
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 44456788999999999999998542 234888899999999999988
Q ss_pred cCCCCCc--------hhhHHHHHH----hhcccccccccCChhHHHHHhHHhHhhcCCHHHHHHHHHHcCC-eEEEEe
Q 027517 144 FNKSTQP--------FTTAIQEWM----IDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGF-SRAKHY 208 (222)
Q Consensus 144 ~~~~~~~--------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf-~~~~~~ 208 (222)
....+.. .+..+...+ .+..... ... +.+ .....+.+.+|++.++++.|. ++....
T Consensus 210 ~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~-ek~----d~f----~~P~y~ps~~E~~~~ie~~G~F~i~~~e 278 (359)
T 1m6e_X 210 LGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEE-EKM----DKF----NIPQYTPSPTEVEAEILKEGSFLIDHIE 278 (359)
T ss_dssp EECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCC-STT----GGG----CCCCBCCCSHHHHHHHHHTTTBCCEEEE
T ss_pred ecCCCCCccccchHHHHHHHHHHHHHHHHccccch-hhh----hcc----CCCccCCCHHHHHHHHHHcCCceEEEEE
Confidence 7765542 122222211 1111000 000 000 011246799999999999964 665543
No 276
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=99.04 E-value=1.7e-09 Score=89.30 Aligned_cols=102 Identities=13% Similarity=0.049 Sum_probs=71.4
Q ss_pred CCeEEEecCCCChhHHHH---HHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEE
Q 027517 35 GDNVLDVCCGSGDLSFLL---SEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 111 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~ 111 (222)
...|||+|||+|-++... ++..+...+|+++|-++.+ ..+++.....+.+ ++|+++.+|++++..| +++|+|+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A-~~a~~~v~~N~~~--dkVtVI~gd~eev~LP-EKVDIIV 433 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNA-VVTLENWQFEEWG--SQVTVVSSDMREWVAP-EKADIIV 433 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHH-HHHHHHHHHHTTG--GGEEEEESCTTTCCCS-SCEEEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHH-HHHHHHHHhccCC--CeEEEEeCcceeccCC-cccCEEE
Confidence 357999999999985443 3332222378999999854 4556555554444 6899999999998776 6799999
Q ss_pred Eccc--ccCcccHHHHHHHHhcccCCCcEEE
Q 027517 112 MGYG--LRNVVDKRKALEESFRVLKPGSRIS 140 (222)
Q Consensus 112 ~~~~--l~~~~~~~~~l~~~~~~l~~gG~l~ 140 (222)
+=.. +-..+....++....+.|||||.++
T Consensus 434 SEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 434 SELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 7221 1111234467888889999999875
No 277
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.98 E-value=2e-09 Score=79.23 Aligned_cols=111 Identities=15% Similarity=0.167 Sum_probs=72.7
Q ss_pred HhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCce
Q 027517 28 SWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFF 107 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 107 (222)
+.....++.+|||||||+|.++..+++.. +..++.++|+..++....... ...+ .++.....++....++..+|
T Consensus 68 ek~~l~~~~~VLDLGaAPGGWSQvAa~~~-~~~~v~g~dVGvDl~~~pi~~-~~~g----~~ii~~~~~~dv~~l~~~~~ 141 (277)
T 3evf_A 68 ERGYVKLEGRVIDLGCGRGGWCYYAAAQK-EVSGVKGFTLGRDGHEKPMNV-QSLG----WNIITFKDKTDIHRLEPVKC 141 (277)
T ss_dssp HTTSSCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTCCCCCCC-CBTT----GGGEEEECSCCTTTSCCCCC
T ss_pred HhCCCCCCCEEEEecCCCCHHHHHHHHhc-CCCcceeEEEeccCccccccc-CcCC----CCeEEEeccceehhcCCCCc
Confidence 33455778899999999999999888652 233688888875531111110 0000 14555666655455566789
Q ss_pred eEEEEcccccCcc----cH---HHHHHHHhcccCCC-cEEEEEecC
Q 027517 108 DAITMGYGLRNVV----DK---RKALEESFRVLKPG-SRISVLDFN 145 (222)
Q Consensus 108 D~v~~~~~l~~~~----~~---~~~l~~~~~~l~~g-G~l~i~~~~ 145 (222)
|+|++..+.+ .. |. ..+++.+.++|+|| |.+++-.+.
T Consensus 142 DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 142 DTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp SEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred cEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 9999988666 21 21 23468888999999 999885555
No 278
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.95 E-value=1.9e-09 Score=88.20 Aligned_cols=123 Identities=15% Similarity=0.073 Sum_probs=86.9
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCC--------------CCcEEEEeCChhHHHHHhcchhhhhhh
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGS--------------QGKVIGLDFSKNQLSMASSRQDLVSKA 85 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~--------------~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (222)
+...+.+++.+...++ +|+|.+||+|.++..+.+.+.. ...++|+|+++.++..|+.++...+..
T Consensus 231 ~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~ 309 (544)
T 3khk_A 231 KSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGID 309 (544)
T ss_dssp HHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCC
Confidence 3445566666665555 9999999999998877654310 347999999999999999876544322
Q ss_pred cCCCeeEEeCCCCCcC-CCCCceeEEEEcccccCc-------------------------cc----HHHHHHHHhcccCC
Q 027517 86 CYKNIEWVEGDALDLP-FSDCFFDAITMGYGLRNV-------------------------VD----KRKALEESFRVLKP 135 (222)
Q Consensus 86 ~~~~i~~~~~d~~~~~-~~~~~~D~v~~~~~l~~~-------------------------~~----~~~~l~~~~~~l~~ 135 (222)
.++.+.++|....+ .+..+||+|+++-.+..- +. .-.+++++.+.|+|
T Consensus 310 --~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~ 387 (544)
T 3khk_A 310 --FNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAP 387 (544)
T ss_dssp --CBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEE
T ss_pred --cccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhcc
Confidence 23444677765543 345689999998776631 10 12578999999999
Q ss_pred CcEEEEEecC
Q 027517 136 GSRISVLDFN 145 (222)
Q Consensus 136 gG~l~i~~~~ 145 (222)
||++.++.+.
T Consensus 388 gGr~aiVlP~ 397 (544)
T 3khk_A 388 TGSMALLLAN 397 (544)
T ss_dssp EEEEEEEEET
T ss_pred CceEEEEecc
Confidence 9998887654
No 279
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.93 E-value=1.7e-09 Score=80.17 Aligned_cols=107 Identities=12% Similarity=0.100 Sum_probs=69.0
Q ss_pred HHHHhhCCCCC--CeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhh----hh--cCCCeeEEeCC
Q 027517 25 MAVSWSGAKTG--DNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVS----KA--CYKNIEWVEGD 96 (222)
Q Consensus 25 ~~~~~~~~~~~--~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~----~~--~~~~i~~~~~d 96 (222)
.+.+.+...++ .+|||+|||+|..+..++.. +++|+++|.++.+.+.+++.+.... .. ...+++++++|
T Consensus 77 ~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D 153 (258)
T 2oyr_A 77 AVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHAS 153 (258)
T ss_dssp HHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESC
T ss_pred HHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECC
Confidence 34455555666 89999999999999999987 4589999999977555554433211 00 00378999999
Q ss_pred CCCc-CCCCCceeEEEEcccccCcccHHHHHHHHhcccCC
Q 027517 97 ALDL-PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKP 135 (222)
Q Consensus 97 ~~~~-~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~ 135 (222)
..+. +...++||+|++...+.+-.. ...+++..+.+++
T Consensus 154 ~~~~L~~~~~~fDvV~lDP~y~~~~~-saavkk~~~~lr~ 192 (258)
T 2oyr_A 154 SLTALTDITPRPQVVYLDPMFPHKQK-SALVKKEMRVFQS 192 (258)
T ss_dssp HHHHSTTCSSCCSEEEECCCCCCCCC------HHHHHHHH
T ss_pred HHHHHHhCcccCCEEEEcCCCCCccc-chHHHHHHHHHHH
Confidence 8773 322246999999887765432 2334444444444
No 280
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.92 E-value=1.1e-08 Score=83.69 Aligned_cols=123 Identities=18% Similarity=0.152 Sum_probs=88.7
Q ss_pred HHHHHHHhhC----CCCCCeEEEecCCCChhHHHHHHHhC--CCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeC
Q 027517 22 WKRMAVSWSG----AKTGDNVLDVCCGSGDLSFLLSEQVG--SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEG 95 (222)
Q Consensus 22 ~~~~~~~~~~----~~~~~~vLdiG~G~G~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 95 (222)
..+.+.+.+. ..++.+|+|.+||+|.++..+.+.+. ...+++|+|+++.++..|+.++...+.. ..++.+.++
T Consensus 205 Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~-~~~~~I~~g 283 (542)
T 3lkd_A 205 VAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP-IENQFLHNA 283 (542)
T ss_dssp HHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC-GGGEEEEES
T ss_pred HHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC-cCccceEec
Confidence 4445555554 34677999999999999988887752 2458999999999999998876443321 025688899
Q ss_pred CCCCc--C-CCCCceeEEEEcccccCcc--------c---------------HHHHHHHHhcccC-CCcEEEEEecC
Q 027517 96 DALDL--P-FSDCFFDAITMGYGLRNVV--------D---------------KRKALEESFRVLK-PGSRISVLDFN 145 (222)
Q Consensus 96 d~~~~--~-~~~~~~D~v~~~~~l~~~~--------~---------------~~~~l~~~~~~l~-~gG~l~i~~~~ 145 (222)
|.... + ....+||+|+++-++..-. + .-.+++++.+.|+ |||++.++.+.
T Consensus 284 DtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 284 DTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp CTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEET
T ss_pred ceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecc
Confidence 98765 3 3456899999986653110 0 1247899999999 99999887654
No 281
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.91 E-value=1.4e-08 Score=72.16 Aligned_cols=101 Identities=11% Similarity=0.017 Sum_probs=73.8
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-------------
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL------------- 100 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~------------- 100 (222)
+..+|||+|| |..+..+++. ++++++.+|.+++..+.+++.+...+.....+++++.+|+.+.
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~--~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~ 105 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAEL--PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWR 105 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTS--TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGG
T ss_pred CCCEEEEECc--hHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhh
Confidence 5679999998 4666666653 3679999999999999999988765430025899999996542
Q ss_pred --C--------C-CCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEe
Q 027517 101 --P--------F-SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 101 --~--------~-~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
+ . ..++||+|+.-.-. ....+..+.+.|+|||++++-+
T Consensus 106 ~l~~~~~~i~~~~~~~~fDlIfIDg~k-----~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 106 SYPDYPLAVWRTEGFRHPDVVLVDGRF-----RVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp GTTHHHHGGGGCTTCCCCSEEEECSSS-----HHHHHHHHHHHCSSCEEEEETT
T ss_pred hHHHHhhhhhccccCCCCCEEEEeCCC-----chhHHHHHHHhcCCCeEEEEeC
Confidence 1 1 13679999997632 2355666778999999996644
No 282
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.88 E-value=2.7e-09 Score=88.16 Aligned_cols=103 Identities=14% Similarity=-0.014 Sum_probs=71.8
Q ss_pred CCeEEEecCCCChhHHHHHHH---hC---------CCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQ---VG---------SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF 102 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~---~~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 102 (222)
...|||+|||+|-++...++. .+ ...+|+++|.++.+....+.+.. .+.+ .+|+++.+|++++..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~--d~VtVI~gd~eev~l 486 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWK--RRVTIIESDMRSLPG 486 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTT--TCSEEEESCGGGHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCC--CeEEEEeCchhhccc
Confidence 458999999999997533222 11 12389999999977765555442 2222 579999999999765
Q ss_pred C-----CCceeEEEEcccccCc--ccHHHHHHHHhcccCCCcEEE
Q 027517 103 S-----DCFFDAITMGYGLRNV--VDKRKALEESFRVLKPGSRIS 140 (222)
Q Consensus 103 ~-----~~~~D~v~~~~~l~~~--~~~~~~l~~~~~~l~~gG~l~ 140 (222)
+ .+++|+|++=..-... +-....|....+.|||||.++
T Consensus 487 p~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 487 IAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 3 4789999974432111 224567888889999999875
No 283
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.86 E-value=2.5e-08 Score=77.29 Aligned_cols=121 Identities=15% Similarity=0.176 Sum_probs=88.1
Q ss_pred HHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhh---cCCCeeEEeCCCCCcC
Q 027517 25 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA---CYKNIEWVEGDALDLP 101 (222)
Q Consensus 25 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~d~~~~~ 101 (222)
.....+...|+.+|||++||+|.-+.++++.. ....++++|+++.-++..++++.+.+.. ...++.+...|...++
T Consensus 139 l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~-~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~ 217 (359)
T 4fzv_A 139 LPVLALGLQPGDIVLDLCAAPGGKTLALLQTG-CCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWG 217 (359)
T ss_dssp HHHHHHCCCTTEEEEESSCTTCHHHHHHHHTT-CEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHH
T ss_pred HHHHHhCCCCCCEEEEecCCccHHHHHHHHhc-CCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcc
Confidence 34455677899999999999999999999874 5568999999999998888877654321 1147888888887753
Q ss_pred -CCCCceeEEEEcccc--------cCccc----------------HHHHHHHHhcccCCCcEEEEEecCC
Q 027517 102 -FSDCFFDAITMGYGL--------RNVVD----------------KRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 102 -~~~~~~D~v~~~~~l--------~~~~~----------------~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
...++||.|++-... ..-++ ..++|....+.|||||+|+-++-+-
T Consensus 218 ~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 218 ELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp HHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred hhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 234689999953221 11111 2467888999999999987765443
No 284
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.86 E-value=1.4e-09 Score=85.49 Aligned_cols=75 Identities=20% Similarity=0.237 Sum_probs=61.4
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhh--hhhcCCCeeEEeCCCCCc-CC-CCCceeE
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLV--SKACYKNIEWVEGDALDL-PF-SDCFFDA 109 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~d~~~~-~~-~~~~~D~ 109 (222)
++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++.+.... +. .+++++++|+.+. +. +.++||+
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl---~~i~~i~~Da~~~L~~~~~~~fDv 166 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEG---KDVNILTGDFKEYLPLIKTFHPDY 166 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTT---CEEEEEESCGGGSHHHHHHHCCSE
T ss_pred CCCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCC---CcEEEEECcHHHhhhhccCCCceE
Confidence 4789999999999999988865 469999999999999999998654 32 4799999999874 22 2347999
Q ss_pred EEEcc
Q 027517 110 ITMGY 114 (222)
Q Consensus 110 v~~~~ 114 (222)
|++.-
T Consensus 167 V~lDP 171 (410)
T 3ll7_A 167 IYVDP 171 (410)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99853
No 285
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.79 E-value=4.8e-09 Score=77.34 Aligned_cols=113 Identities=14% Similarity=0.138 Sum_probs=72.9
Q ss_pred HHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCC
Q 027517 26 AVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDC 105 (222)
Q Consensus 26 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 105 (222)
+.+.....++.+|||||||+|.++..+++.. +..++.++|+...+...+... ...+ .++.....++....++..
T Consensus 82 i~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~-gv~sV~GvdvG~d~~~~pi~~-~~~g----~~ii~~~~~~dv~~l~~~ 155 (282)
T 3gcz_A 82 MEERGYVKPTGIVVDLGCGRGGWSYYAASLK-NVKKVMAFTLGVQGHEKPIMR-TTLG----WNLIRFKDKTDVFNMEVI 155 (282)
T ss_dssp HHHTTSCCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCCC-CBTT----GGGEEEECSCCGGGSCCC
T ss_pred HHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc-CCCeeeeEEeccCcccccccc-ccCC----CceEEeeCCcchhhcCCC
Confidence 3343456788899999999999999988653 334789999987643222210 0001 234444433333334567
Q ss_pred ceeEEEEcccccCcc----cH---HHHHHHHhcccCCC--cEEEEEecC
Q 027517 106 FFDAITMGYGLRNVV----DK---RKALEESFRVLKPG--SRISVLDFN 145 (222)
Q Consensus 106 ~~D~v~~~~~l~~~~----~~---~~~l~~~~~~l~~g--G~l~i~~~~ 145 (222)
++|+|+|..+.+ .. |. ..+++-+.++|+|| |.+++-.+.
T Consensus 156 ~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 156 PGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred CcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 899999988766 32 11 23577778899999 999886655
No 286
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.76 E-value=6.8e-08 Score=81.17 Aligned_cols=113 Identities=15% Similarity=0.075 Sum_probs=76.7
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhC--CCCcEEEEeCChhHHHHH--hcchhhhhh-hcCCCeeEEeCCCCCcC-CCCCc
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVG--SQGKVIGLDFSKNQLSMA--SSRQDLVSK-ACYKNIEWVEGDALDLP-FSDCF 106 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~--~~~~~~~~~-~~~~~i~~~~~d~~~~~-~~~~~ 106 (222)
.++.+|||.|||+|.++..+++.++ ...+++|+|+++.+++.| +..+..... .......+...|+.... ....+
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 3577999999999999999988753 134799999999999998 333221000 00022345555665532 23467
Q ss_pred eeEEEEcccccCc-cc----------------------------HHHHHHHHhcccCCCcEEEEEecC
Q 027517 107 FDAITMGYGLRNV-VD----------------------------KRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 107 ~D~v~~~~~l~~~-~~----------------------------~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
||+|+++-.+... .. ...+++.+.+.|+|||++.++.+.
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 9999998887321 10 123678889999999999887665
No 287
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.72 E-value=8.1e-08 Score=71.88 Aligned_cols=109 Identities=13% Similarity=0.104 Sum_probs=78.4
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhC----CCCcEEEEeCChh--------------------------HHHHHhcchhhh
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVG----SQGKVIGLDFSKN--------------------------QLSMASSRQDLV 82 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~----~~~~~~~~D~~~~--------------------------~~~~~~~~~~~~ 82 (222)
....+|||+|+..|..+..++..+. ++.+++++|..+. .++.+++++...
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 3456999999999999988877653 3678999996432 345566666544
Q ss_pred hhhcCCCeeEEeCCCCC-cC-CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 83 SKACYKNIEWVEGDALD-LP-FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 83 ~~~~~~~i~~~~~d~~~-~~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
+.. .++++++.+|+.+ ++ .+.++||+|+.-.-. .......++.+...|+|||.+++-+.
T Consensus 185 gl~-~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 185 DLL-DEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--YESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp TCC-STTEEEEESCHHHHSTTCCCCCEEEEEECCCS--HHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CCC-cCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--cccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 320 1589999999876 33 334689999987632 23346789999999999999988554
No 288
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.71 E-value=8.5e-08 Score=71.10 Aligned_cols=87 Identities=22% Similarity=0.293 Sum_probs=70.4
Q ss_pred HHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc
Q 027517 21 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL 100 (222)
Q Consensus 21 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 100 (222)
.+...+++.+...++..++|.+||.|..+..+++. +++++|+|.++.+++.+++ +.. +++.++++++.++
T Consensus 9 VLl~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~------~rv~lv~~~f~~l 78 (285)
T 1wg8_A 9 VLYQEALDLLAVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL------PGLTVVQGNFRHL 78 (285)
T ss_dssp TTHHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC------TTEEEEESCGGGH
T ss_pred HHHHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc------CCEEEEECCcchH
Confidence 34566777778888899999999999999999986 5699999999999999998 642 4899999999876
Q ss_pred C-----CCCCceeEEEEccccc
Q 027517 101 P-----FSDCFFDAITMGYGLR 117 (222)
Q Consensus 101 ~-----~~~~~~D~v~~~~~l~ 117 (222)
+ ...+++|.|++...+.
T Consensus 79 ~~~L~~~g~~~vDgIL~DLGvS 100 (285)
T 1wg8_A 79 KRHLAALGVERVDGILADLGVS 100 (285)
T ss_dssp HHHHHHTTCSCEEEEEEECSCC
T ss_pred HHHHHHcCCCCcCEEEeCCccc
Confidence 3 1225799999865544
No 289
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.69 E-value=1.1e-07 Score=63.02 Aligned_cols=90 Identities=14% Similarity=0.062 Sum_probs=63.0
Q ss_pred CCCCeEEEecCCCC-hhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCC-CCceeEE
Q 027517 33 KTGDNVLDVCCGSG-DLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS-DCFFDAI 110 (222)
Q Consensus 33 ~~~~~vLdiG~G~G-~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~~D~v 110 (222)
.++.+|||+|||+| ..+..|++. .+..|+++|+++.++ .+++.|+.+.... -+.||+|
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~--~g~~V~atDInp~Av------------------~~v~dDiF~P~~~~Y~~~DLI 93 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKH--SKVDLVLTDIKPSHG------------------GIVRDDITSPRMEIYRGAALI 93 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHH--SCCEEEEECSSCSST------------------TEECCCSSSCCHHHHTTEEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHh--CCCeEEEEECCcccc------------------ceEEccCCCCcccccCCcCEE
Confidence 45679999999999 588888875 367899999998654 2788888874321 1479999
Q ss_pred EEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCC
Q 027517 111 TMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKS 147 (222)
Q Consensus 111 ~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~ 147 (222)
++... .++....+.++.+ +-|.-++|..+...
T Consensus 94 YsirP---P~El~~~i~~lA~--~v~adliI~pL~~E 125 (153)
T 2k4m_A 94 YSIRP---PAEIHSSLMRVAD--AVGARLIIKPLTGE 125 (153)
T ss_dssp EEESC---CTTTHHHHHHHHH--HHTCEEEEECBTTB
T ss_pred EEcCC---CHHHHHHHHHHHH--HcCCCEEEEcCCCC
Confidence 88554 3445555556655 33567777665543
No 290
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.67 E-value=2.4e-07 Score=71.44 Aligned_cols=88 Identities=13% Similarity=0.122 Sum_probs=64.2
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEE
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 111 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~ 111 (222)
..++.+|||+||++|+++..+++. +++|+++|+.+-. ...... ++|.+++.|......+.+++|+|+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~l~-~~l~~~---------~~V~~~~~d~~~~~~~~~~~D~vv 275 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGPMA-QSLMDT---------GQVTWLREDGFKFRPTRSNISWMV 275 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSCCC-HHHHTT---------TCEEEECSCTTTCCCCSSCEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhhcC-hhhccC---------CCeEEEeCccccccCCCCCcCEEE
Confidence 468999999999999999999876 5699999976421 111111 689999999988766667899999
Q ss_pred EcccccCcccHHHHHHHHhcccCCC
Q 027517 112 MGYGLRNVVDKRKALEESFRVLKPG 136 (222)
Q Consensus 112 ~~~~l~~~~~~~~~l~~~~~~l~~g 136 (222)
|-.+. ++..++.-+.+++..+
T Consensus 276 sDm~~----~p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 276 CDMVE----KPAKVAALMAQWLVNG 296 (375)
T ss_dssp ECCSS----CHHHHHHHHHHHHHTT
T ss_pred EcCCC----ChHHhHHHHHHHHhcc
Confidence 96654 3445555555555444
No 291
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.67 E-value=1e-08 Score=96.69 Aligned_cols=151 Identities=15% Similarity=0.115 Sum_probs=75.6
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCC----CCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-CCCCCce
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGS----QGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-PFSDCFF 107 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~ 107 (222)
.+..+|||+|+|+|..+..+.+.++. ..+++..|+|+...+.+++++... ++.....|..+. ++....|
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~------di~~~~~d~~~~~~~~~~~y 1312 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL------HVTQGQWDPANPAPGSLGKA 1312 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH------TEEEECCCSSCCCC-----C
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc------ccccccccccccccCCCCce
Confidence 35679999999999988877776542 127899999999988888886432 233322343332 2234579
Q ss_pred eEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhc
Q 027517 108 DAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREF 187 (222)
Q Consensus 108 D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (222)
|+|++.+++|..++....+.++++.|||||++++.+..... .......|+.. ........
T Consensus 1313 dlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~~~~--~~g~~~~~~~~------------------~~r~~~~~ 1372 (2512)
T 2vz8_A 1313 DLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTLLAGH--PLGEMVGFLTS------------------PEQGGRHL 1372 (2512)
T ss_dssp CEEEEECC--------------------CCEEEEEEC-------------------------------------------
T ss_pred eEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEeccccc--ccccccccccc------------------ccccCCcc
Confidence 99999999998888899999999999999999887654310 00000111100 00011234
Q ss_pred CCHHHHHHHHHHcCCeEEEEee
Q 027517 188 LTGKDLEKLALEIGFSRAKHYE 209 (222)
Q Consensus 188 ~~~~~~~~~l~~~Gf~~~~~~~ 209 (222)
.+.++|.++|+++||..+....
T Consensus 1373 ~~~~~w~~~l~~~gf~~~~~~~ 1394 (2512)
T 2vz8_A 1373 LSQDQWESLFAGASLHLVALKR 1394 (2512)
T ss_dssp ---CTTTTSSTTTTEEEEEEEE
T ss_pred cCHHHHHHHHHhCCCceeeecc
Confidence 6778899999999999877643
No 292
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.66 E-value=6e-08 Score=75.03 Aligned_cols=108 Identities=15% Similarity=0.091 Sum_probs=78.4
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhh-----hhcCCCeeEEeCCCCCcC----CC
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVS-----KACYKNIEWVEGDALDLP----FS 103 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~d~~~~~----~~ 103 (222)
.++++||-||.|.|..+..+++. + ..+++.+|+++..++.+++.+.... ....++++++..|....- ..
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~ 281 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 281 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhc
Confidence 35679999999999999999986 3 3689999999999999998764211 111146899999986531 12
Q ss_pred CCceeEEEEcccccCc---c----c---HHHHHHHHhcccCCCcEEEEE
Q 027517 104 DCFFDAITMGYGLRNV---V----D---KRKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~---~----~---~~~~l~~~~~~l~~gG~l~i~ 142 (222)
.++||+|+.-..-... + . ...+++.+++.|+|||.++..
T Consensus 282 ~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 282 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred cCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 4579999975432111 1 1 256789999999999999764
No 293
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.53 E-value=2.8e-07 Score=68.44 Aligned_cols=107 Identities=18% Similarity=0.148 Sum_probs=67.4
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEE
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 111 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~ 111 (222)
..++.+||||||++|.++..+++.. +...|.++|+...+....... .... .++.....+.....+...++|+|+
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~-gv~sV~Gvdlg~~~~~~P~~~-~~~~----~~iv~~~~~~di~~l~~~~~DlVl 152 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQK-EVMSVKGYTLGIEGHEKPIHM-QTLG----WNIVKFKDKSNVFTMPTEPSDTLL 152 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCCC-CBTT----GGGEEEECSCCTTTSCCCCCSEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhc-CCceeeeEEeccccccccccc-cccC----CceEEeecCceeeecCCCCcCEEe
Confidence 4578899999999999999999753 233788999875431111100 0000 133333333222234456899999
Q ss_pred EcccccCccc-------HHHHHHHHhcccCCC-cEEEEEecC
Q 027517 112 MGYGLRNVVD-------KRKALEESFRVLKPG-SRISVLDFN 145 (222)
Q Consensus 112 ~~~~l~~~~~-------~~~~l~~~~~~l~~g-G~l~i~~~~ 145 (222)
+..+.+ ... ...+++-+..+|+|| |.+++-.+.
T Consensus 153 sD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 153 CDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp ECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred ecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 977666 321 134577778899999 999886655
No 294
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.52 E-value=1.8e-06 Score=70.54 Aligned_cols=123 Identities=20% Similarity=0.213 Sum_probs=85.9
Q ss_pred hHHHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCC------------CCcEEEEeCChhHHHHHhcchhhhhhhcC
Q 027517 20 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGS------------QGKVIGLDFSKNQLSMASSRQDLVSKACY 87 (222)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~------------~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (222)
+...+.+++.+...++.+|+|.+||+|.++....+.+.. ...++|+|+++.+...|+-++.-.+.
T Consensus 203 ~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~--- 279 (530)
T 3ufb_A 203 RPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGL--- 279 (530)
T ss_dssp HHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCC---
Confidence 445567777887788889999999999998877654421 23699999999999998876544332
Q ss_pred CCeeEEeCCCCCcCC----CCCceeEEEEcccccCccc----------------HHHHHHHHhcccC-------CCcEEE
Q 027517 88 KNIEWVEGDALDLPF----SDCFFDAITMGYGLRNVVD----------------KRKALEESFRVLK-------PGSRIS 140 (222)
Q Consensus 88 ~~i~~~~~d~~~~~~----~~~~~D~v~~~~~l~~~~~----------------~~~~l~~~~~~l~-------~gG~l~ 140 (222)
....+..+|....+. ...+||+|+++-.+..-.+ ...+++.+.+.|| |||++.
T Consensus 280 ~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~a 359 (530)
T 3ufb_A 280 EYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAA 359 (530)
T ss_dssp SCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEE
T ss_pred ccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEE
Confidence 244667777665432 2346999999988752211 1245667777775 799988
Q ss_pred EEecC
Q 027517 141 VLDFN 145 (222)
Q Consensus 141 i~~~~ 145 (222)
++.+.
T Consensus 360 vVlP~ 364 (530)
T 3ufb_A 360 VVVPN 364 (530)
T ss_dssp EEEEH
T ss_pred EEecc
Confidence 87654
No 295
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=98.45 E-value=4.9e-06 Score=63.98 Aligned_cols=161 Identities=9% Similarity=0.040 Sum_probs=102.3
Q ss_pred HHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhh------------------c
Q 027517 25 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA------------------C 86 (222)
Q Consensus 25 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~------------------~ 86 (222)
.+...+...+...|+.+|||.......+.... ++..++-+|. |+.++..++.+...+.. .
T Consensus 88 ~v~~fl~~~~~~qVV~LGaGlDTr~~RL~~~~-~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~ 165 (334)
T 1rjd_A 88 AILEFLVANEKVQVVNLGCGSDLRMLPLLQMF-PHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLID 165 (334)
T ss_dssp HHHHHHHHCSSEEEEEETCTTCCTHHHHHHHC-TTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEE
T ss_pred HHHHHHHHCCCcEEEEeCCCCccHHHHhcCcC-CCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccC
Confidence 33334433566799999999999999888652 4557777777 88887777766443110 1
Q ss_pred CCCeeEEeCCCCCcC--------C-CCCceeEEEEcccccCccc--HHHHHHHHhcccCCCcEEEEEecCCC---CCchh
Q 027517 87 YKNIEWVEGDALDLP--------F-SDCFFDAITMGYGLRNVVD--KRKALEESFRVLKPGSRISVLDFNKS---TQPFT 152 (222)
Q Consensus 87 ~~~i~~~~~d~~~~~--------~-~~~~~D~v~~~~~l~~~~~--~~~~l~~~~~~l~~gG~l~i~~~~~~---~~~~~ 152 (222)
..+..++..|+.+.. . ......++++-+++.+++. ...+++.+.+.. |+|.+++.+...+ .....
T Consensus 166 ~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~fg 244 (334)
T 1rjd_A 166 QGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQPNDRFG 244 (334)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCSTTCCHH
T ss_pred CCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCCCcchHH
Confidence 257889999998731 1 2245789999999999953 567788888776 7787777776655 22222
Q ss_pred hHHHHHHhh-cccccccccCChhHHHHHhHHhHhhcCCHHHHHHHHHHcCCe
Q 027517 153 TAIQEWMID-NVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFS 203 (222)
Q Consensus 153 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 203 (222)
..+...+.. .. .+. .....+.++++..+.|.++||+
T Consensus 245 ~~m~~~l~~~rg-~~l--------------~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 245 AIMQSNLKESRN-LEM--------------PTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHHHHHHHHHHC-CCC--------------TTTTTTCSHHHHHGGGTTSSEE
T ss_pred HHHHHHhhcccC-Ccc--------------cccccCCCHHHHHHHHHHCCCC
Confidence 211111111 00 000 0112356889999999999997
No 296
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.40 E-value=2e-06 Score=65.33 Aligned_cols=90 Identities=20% Similarity=0.264 Sum_probs=72.0
Q ss_pred HHHHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC
Q 027517 22 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP 101 (222)
Q Consensus 22 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 101 (222)
+...+++.+...|+..++|..||.|..+..+++.+++.++++++|.++.+++.++ ++. . .+++++.++..++.
T Consensus 45 Ll~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~--~----~Rv~lv~~nF~~l~ 117 (347)
T 3tka_A 45 LLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID--D----PRFSIIHGPFSALG 117 (347)
T ss_dssp TTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC--C----TTEEEEESCGGGHH
T ss_pred cHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc--C----CcEEEEeCCHHHHH
Confidence 4456677778888999999999999999999998878889999999999999995 441 1 58999999988752
Q ss_pred -----CC-CCceeEEEEcccccC
Q 027517 102 -----FS-DCFFDAITMGYGLRN 118 (222)
Q Consensus 102 -----~~-~~~~D~v~~~~~l~~ 118 (222)
.. .+++|.|++...+..
T Consensus 118 ~~L~~~g~~~~vDgILfDLGVSS 140 (347)
T 3tka_A 118 EYVAERDLIGKIDGILLDLGVSS 140 (347)
T ss_dssp HHHHHTTCTTCEEEEEEECSCCH
T ss_pred HHHHhcCCCCcccEEEECCccCH
Confidence 11 136999998766553
No 297
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.39 E-value=3.1e-06 Score=60.65 Aligned_cols=115 Identities=17% Similarity=0.180 Sum_probs=75.5
Q ss_pred HHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeC-CCCCcCCCC
Q 027517 26 AVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEG-DALDLPFSD 104 (222)
Q Consensus 26 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~~~ 104 (222)
+.+.....++.+|+|+||++|.++..++...+ ..+|+++|+-..-.+..+- .. .-+++.+.+..+ |+...+ .
T Consensus 70 i~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g-~~~V~avdvG~~ghe~P~~-~~---s~gwn~v~fk~gvDv~~~~--~ 142 (267)
T 3p8z_A 70 FVERNMVIPEGRVIDLGCGRGGWSYYCAGLKK-VTEVRGYTKGGPGHEEPVP-MS---TYGWNIVKLMSGKDVFYLP--P 142 (267)
T ss_dssp HHHTTSSCCCEEEEEESCTTSHHHHHHHTSTT-EEEEEEECCCSTTSCCCCC-CC---CTTTTSEEEECSCCGGGCC--C
T ss_pred HHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcC-CCEEEEEecCCCCccCcch-hh---hcCcCceEEEeccceeecC--C
Confidence 44444667888999999999999998887742 2379999986654321111 11 122367899988 876554 3
Q ss_pred CceeEEEEcccccCcc---cH---HHHHHHHhcccCCCcEEEEEecCCCC
Q 027517 105 CFFDAITMGYGLRNVV---DK---RKALEESFRVLKPGSRISVLDFNKST 148 (222)
Q Consensus 105 ~~~D~v~~~~~l~~~~---~~---~~~l~~~~~~l~~gG~l~i~~~~~~~ 148 (222)
.++|.|+|-..=..-. +. .++|+-+.++|++ |.+++-.+.+..
T Consensus 143 ~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 143 EKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred ccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 5699999966542221 11 2367777889998 777775555444
No 298
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.39 E-value=3.6e-07 Score=66.39 Aligned_cols=112 Identities=17% Similarity=0.189 Sum_probs=66.7
Q ss_pred HHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeC-CCCCcCCCC
Q 027517 26 AVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEG-DALDLPFSD 104 (222)
Q Consensus 26 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~~~ 104 (222)
+.+..-..|+.+|+|+||++|.++...++..+ -..+.|.++..+. . ... ..... ....-+.+.++ |+.+++ .
T Consensus 65 IdeK~likpg~~VVDLGaAPGGWSQvAa~~~~-vg~V~G~vig~D~-~-~~P-~~~~~-~Gv~~i~~~~G~Df~~~~--~ 137 (269)
T 2px2_A 65 LVERRFVQPIGKVVDLGCGRGGWSYYAATMKN-VQEVRGYTKGGPG-H-EEP-MLMQS-YGWNIVTMKSGVDVFYKP--S 137 (269)
T ss_dssp HHHTTSCCCCEEEEEETCTTSHHHHHHTTSTT-EEEEEEECCCSTT-S-CCC-CCCCS-TTGGGEEEECSCCGGGSC--C
T ss_pred HHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcC-CCCceeEEEcccc-c-cCC-CcccC-CCceEEEeeccCCccCCC--C
Confidence 33333567899999999999999999987621 1234455544331 0 000 00000 00011245546 888743 4
Q ss_pred CceeEEEEcccccCcc----cHH---HHHHHHhcccCCCc-EEEEEecC
Q 027517 105 CFFDAITMGYGLRNVV----DKR---KALEESFRVLKPGS-RISVLDFN 145 (222)
Q Consensus 105 ~~~D~v~~~~~l~~~~----~~~---~~l~~~~~~l~~gG-~l~i~~~~ 145 (222)
.++|+|+|-.+-. -. |.. .+++-+.++|+||| .+++=.+.
T Consensus 138 ~~~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 138 EISDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp CCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCCCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 5799999976554 22 222 25667778999999 88776666
No 299
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.27 E-value=6.7e-06 Score=60.92 Aligned_cols=113 Identities=17% Similarity=0.153 Sum_probs=73.5
Q ss_pred HHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeC-CCCCcCCCC
Q 027517 26 AVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEG-DALDLPFSD 104 (222)
Q Consensus 26 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~~~ 104 (222)
+.+...+.++.+||||||++|.++..++...+ ..+|+++|+-..-.+..+- ....+. .-+.+... |+..++.
T Consensus 86 i~~~~~l~~~~~VlDLGaapGGwsq~~~~~~g-v~~V~avdvG~~~he~P~~-~~ql~w---~lV~~~~~~Dv~~l~~-- 158 (321)
T 3lkz_A 86 LVERRFLEPVGKVIDLGCGRGGWCYYMATQKR-VQEVRGYTKGGPGHEEPQL-VQSYGW---NIVTMKSGVDVFYRPS-- 158 (321)
T ss_dssp HHHTTSCCCCEEEEEETCTTCHHHHHHTTCTT-EEEEEEECCCSTTSCCCCC-CCBTTG---GGEEEECSCCTTSSCC--
T ss_pred HHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcC-CCEEEEEEcCCCCccCcch-hhhcCC---cceEEEeccCHhhCCC--
Confidence 44445567888999999999999998887632 2379999986652211000 011122 24677776 7766543
Q ss_pred CceeEEEEcccccCcccH-------HHHHHHHhcccCCC-cEEEEEecCC
Q 027517 105 CFFDAITMGYGLRNVVDK-------RKALEESFRVLKPG-SRISVLDFNK 146 (222)
Q Consensus 105 ~~~D~v~~~~~l~~~~~~-------~~~l~~~~~~l~~g-G~l~i~~~~~ 146 (222)
.++|+|+|-.. ..-+++ .++|+-+.++|++| |.+++-.+.+
T Consensus 159 ~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 159 ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 56999999766 433332 23566668899998 8887755554
No 300
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=98.08 E-value=0.0001 Score=56.06 Aligned_cols=108 Identities=16% Similarity=0.001 Sum_probs=77.6
Q ss_pred CCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC---------CCCC
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---------FSDC 105 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---------~~~~ 105 (222)
...|++||||.-.....+.. +.+..++-+| .|+.++..++.+...+.....+..++..|+.+ . +...
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~--~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDW--PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPS 178 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCC--CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTT
T ss_pred CCeEEEeCCCCCchhhhccC--CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCC
Confidence 35799999998777655541 2346899999 59999988888754322222578889999876 2 2223
Q ss_pred ceeEEEEcccccCccc--HHHHHHHHhcccCCCcEEEEEecCC
Q 027517 106 FFDAITMGYGLRNVVD--KRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 106 ~~D~v~~~~~l~~~~~--~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
..-++++-++++++++ ...+++.+...+.||+.+++.....
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 4567888899999864 5678899998888999887765543
No 301
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=98.04 E-value=3.4e-05 Score=57.19 Aligned_cols=101 Identities=13% Similarity=-0.009 Sum_probs=67.4
Q ss_pred hCCCCCCeEEEecC------CCChhHHHHHHHhCCC-CcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC
Q 027517 30 SGAKTGDNVLDVCC------GSGDLSFLLSEQVGSQ-GKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF 102 (222)
Q Consensus 30 ~~~~~~~~vLdiG~------G~G~~~~~l~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 102 (222)
+..+-+.+|||+|| .+|.. .++.+.+. +.++++|+.+-.. . .. .++++|......
T Consensus 105 ~~vp~gmrVLDLGA~s~kg~APGS~---VLr~~~p~g~~VVavDL~~~~s------d--------a~-~~IqGD~~~~~~ 166 (344)
T 3r24_A 105 LAVPYNMRVIHFGAGSDKGVAPGTA---VLRQWLPTGTLLVDSDLNDFVS------D--------AD-STLIGDCATVHT 166 (344)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHHH---HHHHHSCTTCEEEEEESSCCBC------S--------SS-EEEESCGGGEEE
T ss_pred EeecCCCEEEeCCCCCCCCCCCcHH---HHHHhCCCCcEEEEeeCccccc------C--------CC-eEEEcccccccc
Confidence 45577899999997 56663 33333454 5899999977321 0 12 458999766443
Q ss_pred CCCceeEEEEcccccCc-----cc------HHHHHHHHhcccCCCcEEEEEecCCCCC
Q 027517 103 SDCFFDAITMGYGLRNV-----VD------KRKALEESFRVLKPGSRISVLDFNKSTQ 149 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~~-----~~------~~~~l~~~~~~l~~gG~l~i~~~~~~~~ 149 (222)
.++||+|++-..-... +. .+.++.-+.+.|+|||.+++=.+.....
T Consensus 167 -~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~ 223 (344)
T 3r24_A 167 -ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWN 223 (344)
T ss_dssp -SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCC
T ss_pred -CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCH
Confidence 3779999985442211 11 3667788888999999998876665543
No 302
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.04 E-value=1.7e-05 Score=60.08 Aligned_cols=55 Identities=20% Similarity=0.230 Sum_probs=45.0
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhh
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLV 82 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (222)
..+++... .++..|||++||+|..+..+++. +.+++|+|+++.+++.+++++...
T Consensus 226 ~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 226 ERLVRMFS-FVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHC-CTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHHh
Confidence 34444444 57889999999999999987765 568999999999999999998654
No 303
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=98.01 E-value=6.1e-05 Score=56.77 Aligned_cols=134 Identities=14% Similarity=0.078 Sum_probs=77.9
Q ss_pred CCCCeEEEecCCCChhHHHHHH---HhCCCCc--EEEEeCCh--------hHHHH-HhcchhhhhhhcCCC--eeEEeCC
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSE---QVGSQGK--VIGLDFSK--------NQLSM-ASSRQDLVSKACYKN--IEWVEGD 96 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~---~~~~~~~--~~~~D~~~--------~~~~~-~~~~~~~~~~~~~~~--i~~~~~d 96 (222)
.+.-+|||+|-|+|.......+ ..++..+ ++.+|..+ +.... ........+.....+ +.+..+|
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GD 174 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGD 174 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESC
T ss_pred CCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEech
Confidence 3446899999999987643332 2245544 55666422 11111 111111101000123 4567788
Q ss_pred CCC-cC-CCCCceeEEEEccc-ccCcccH--HHHHHHHhcccCCCcEEEEEecCCCCCchhhHHHHHHhhcccccccccC
Q 027517 97 ALD-LP-FSDCFFDAITMGYG-LRNVVDK--RKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGY 171 (222)
Q Consensus 97 ~~~-~~-~~~~~~D~v~~~~~-l~~~~~~--~~~l~~~~~~l~~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (222)
+.+ ++ ....++|+++.-.. -..-|+. ..+++.+++.++|||++.-
T Consensus 175 a~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laT------------------------------ 224 (308)
T 3vyw_A 175 ARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVS------------------------------ 224 (308)
T ss_dssp HHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEE------------------------------
T ss_pred HHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEE------------------------------
Confidence 765 33 33447999998542 1111332 7899999999999999852
Q ss_pred ChhHHHHHhHHhHhhcCCHHHHHHHHHHcCCeEEEEeeec
Q 027517 172 GLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELS 211 (222)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 211 (222)
+-....+++.|+++||++.+...+.
T Consensus 225 ---------------Ytaag~VRR~L~~aGF~V~k~~G~g 249 (308)
T 3vyw_A 225 ---------------YSSSLSVRKSLLTLGFKVGSSREIG 249 (308)
T ss_dssp ---------------SCCCHHHHHHHHHTTCEEEEEECC-
T ss_pred ---------------EeCcHHHHHHHHHCCCEEEecCCCC
Confidence 1233577899999999988766544
No 304
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=97.99 E-value=0.002 Score=49.39 Aligned_cols=170 Identities=9% Similarity=0.058 Sum_probs=103.7
Q ss_pred HHHHHhhCCC-CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhh------------------
Q 027517 24 RMAVSWSGAK-TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK------------------ 84 (222)
Q Consensus 24 ~~~~~~~~~~-~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~------------------ 84 (222)
..+...+... +...|+-+|||.=.....+.....++..++-+|. |+.++.-++.+...+.
T Consensus 79 ~~v~~fl~~~~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~ 157 (334)
T 3iei_A 79 QLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDG 157 (334)
T ss_dssp HHHHHHHHHTTTCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCT
T ss_pred HHHHHHHHhCCCCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhccccccccccccc
Confidence 3344444332 5679999999998887777653113557888886 6666655544432110
Q ss_pred --hcCCCeeEEeCCCCCc----------CCCCCceeEEEEcccccCcc--cHHHHHHHHhcccCCCcEEEEEecCCCCCc
Q 027517 85 --ACYKNIEWVEGDALDL----------PFSDCFFDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQP 150 (222)
Q Consensus 85 --~~~~~i~~~~~d~~~~----------~~~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~l~~gG~l~i~~~~~~~~~ 150 (222)
-...+...+..|+.+. .+.....-++++-+++.+++ ....+++.+.+... +|.+++.+...+..+
T Consensus 158 ~~l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~-~~~~i~yE~i~p~d~ 236 (334)
T 3iei_A 158 HILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFE-RAMFINYEQVNMGDR 236 (334)
T ss_dssp TEEECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCS-SEEEEEEEECCTTSH
T ss_pred ccCCCCceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCC-CceEEEEeccCCCCH
Confidence 0125788999998762 13334567888888888885 35677888877664 556666676655544
Q ss_pred hhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcCCHHHHHHHHHHcCCeEEEEeee
Q 027517 151 FTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYEL 210 (222)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 210 (222)
+...+.......... . .+...+.++++..+.+.++||+.++..+.
T Consensus 237 fg~~M~~~l~~~g~p-l--------------~sl~~y~t~~~~~~r~~~~Gw~~~~~~d~ 281 (334)
T 3iei_A 237 FGQIMIENLRRRQCD-L--------------AGVETCKSLESQKERLLSNGWETASAVDM 281 (334)
T ss_dssp HHHHHHHHHHTTTCC-C--------------TTGGGGGCHHHHHHHHHTTTCSEEEEEEH
T ss_pred HHHHHHHHHHHhCCC-C--------------cccccCCCHHHHHHHHHHcCCCcceeecH
Confidence 433333322211110 0 11223568889999999999998776544
No 305
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.77 E-value=0.00012 Score=56.60 Aligned_cols=74 Identities=12% Similarity=0.036 Sum_probs=56.6
Q ss_pred hHHHHHHHHhhCCC------CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEE
Q 027517 20 RIWKRMAVSWSGAK------TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWV 93 (222)
Q Consensus 20 ~~~~~~~~~~~~~~------~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~ 93 (222)
....+.+++.+... ++..|||||.|.|.++..|++.. ...+++++|+++..+...++.. . .++++++
T Consensus 38 ~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~-~~~~vvavE~D~~l~~~L~~~~-~-----~~~l~ii 110 (353)
T 1i4w_A 38 PTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKY-CPRQYSLLEKRSSLYKFLNAKF-E-----GSPLQIL 110 (353)
T ss_dssp HHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHH-CCSEEEEECCCHHHHHHHHHHT-T-----TSSCEEE
T ss_pred HHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhC-CCCEEEEEecCHHHHHHHHHhc-c-----CCCEEEE
Confidence 34445556655544 35899999999999999999864 2348999999999988887765 1 1589999
Q ss_pred eCCCCCc
Q 027517 94 EGDALDL 100 (222)
Q Consensus 94 ~~d~~~~ 100 (222)
.+|+.++
T Consensus 111 ~~D~l~~ 117 (353)
T 1i4w_A 111 KRDPYDW 117 (353)
T ss_dssp CSCTTCH
T ss_pred ECCccch
Confidence 9999764
No 306
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.48 E-value=0.00021 Score=53.10 Aligned_cols=108 Identities=8% Similarity=-0.075 Sum_probs=82.9
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC-c---CCCCCceeE
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD-L---PFSDCFFDA 109 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~-~---~~~~~~~D~ 109 (222)
.+..+||+=+|+|.++..++.. +.+++.+|.++...+..++++... .++.++..|... + ..+..+||+
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~---~d~~vfvE~~~~a~~~L~~Nl~~~-----~~~~V~~~D~~~~L~~l~~~~~~fdL 162 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRS---QDRLYLCELHPTEYNFLLKLPHFN-----KKVYVNHTDGVSKLNALLPPPEKRGL 162 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCT---TSEEEEECCSHHHHHHHTTSCCTT-----SCEEEECSCHHHHHHHHCSCTTSCEE
T ss_pred cCCCceeEeCCcHHHHHHHcCC---CCeEEEEeCCHHHHHHHHHHhCcC-----CcEEEEeCcHHHHHHHhcCCCCCccE
Confidence 3557999999999999988753 468999999999999999998642 589999999754 2 123356999
Q ss_pred EEEcccccCcccHHHHHHHHhc--ccCCCcEEEEEecCCCCC
Q 027517 110 ITMGYGLRNVVDKRKALEESFR--VLKPGSRISVLDFNKSTQ 149 (222)
Q Consensus 110 v~~~~~l~~~~~~~~~l~~~~~--~l~~gG~l~i~~~~~~~~ 149 (222)
|++--.+..-.+..++++.+.+ .+.|+|++++.-+.....
T Consensus 163 VfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~ 204 (283)
T 2oo3_A 163 IFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKA 204 (283)
T ss_dssp EEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESSHH
T ss_pred EEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEeccchH
Confidence 9998877754566666666665 567899999977665443
No 307
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.45 E-value=0.00038 Score=51.63 Aligned_cols=54 Identities=22% Similarity=0.266 Sum_probs=43.5
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhh
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDL 81 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (222)
+.+++... .++..|||..||+|..+....+. +.+++|+|+++..++.+++++..
T Consensus 203 ~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~---gr~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 203 ERIIRASS-NPNDLVLDCFMGSGTTAIVAKKL---GRNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp HHHHHHHC-CTTCEEEESSCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC
T ss_pred HHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHh
Confidence 33444433 67889999999999999887765 56999999999999999988753
No 308
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.25 E-value=0.0047 Score=48.28 Aligned_cols=73 Identities=19% Similarity=0.170 Sum_probs=57.1
Q ss_pred CeEEEecCCCChhHHHHHHHhCCCC-cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC--------CCCc
Q 027517 36 DNVLDVCCGSGDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF--------SDCF 106 (222)
Q Consensus 36 ~~vLdiG~G~G~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--------~~~~ 106 (222)
.+++|+-||.|.++.-+... +. .+.++|+++.+.+..+.+. ++..++++|+.++.. ....
T Consensus 3 ~~vidLFsG~GGlslG~~~a---G~~~v~avE~d~~a~~t~~~N~--------~~~~~~~~DI~~~~~~~~~~~~~~~~~ 71 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA---GFDVKMAVEIDQHAINTHAINF--------PRSLHVQEDVSLLNAEIIKGFFKNDMP 71 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH---TCEEEEEECSCHHHHHHHHHHC--------TTSEEECCCGGGCCHHHHHHHHCSCCC
T ss_pred CeEEEEccCcCHHHHHHHHC---CCcEEEEEeCCHHHHHHHHHhC--------CCCceEecChhhcCHHHHHhhcccCCC
Confidence 48999999999999998876 34 4679999999988887765 467788889887531 2357
Q ss_pred eeEEEEcccccCc
Q 027517 107 FDAITMGYGLRNV 119 (222)
Q Consensus 107 ~D~v~~~~~l~~~ 119 (222)
+|+|+.......+
T Consensus 72 ~D~i~ggpPCQ~f 84 (376)
T 3g7u_A 72 IDGIIGGPPCQGF 84 (376)
T ss_dssp CCEEEECCCCCTT
T ss_pred eeEEEecCCCCCc
Confidence 9999987775555
No 309
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=97.07 E-value=0.0024 Score=50.35 Aligned_cols=105 Identities=19% Similarity=0.173 Sum_probs=69.7
Q ss_pred HhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCC-cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-----
Q 027517 28 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL----- 100 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~----- 100 (222)
...+..++.+||-+|+|. |..+..+++.. +. +|+++|.+++.++.+++.- ...+..+-.+.
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~lG----------a~~i~~~~~~~~~~~~ 246 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLL--GAACVIVGDQNPERLKLLSDAG----------FETIDLRNSAPLRDQI 246 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHH--TCSEEEEEESCHHHHHHHHTTT----------CEEEETTSSSCHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEEcCCHHHHHHHHHcC----------CcEEcCCCcchHHHHH
Confidence 445678899999999987 88888888876 45 8999999999888877541 12332211111
Q ss_pred C--CCCCceeEEEEcccccCc--------ccHHHHHHHHhcccCCCcEEEEEec
Q 027517 101 P--FSDCFFDAITMGYGLRNV--------VDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 101 ~--~~~~~~D~v~~~~~l~~~--------~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
. .....+|+|+-.-.-... .+....++...+.|+++|++++...
T Consensus 247 ~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 247 DQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp HHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred HHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 0 112359999865443210 0123467888899999999877543
No 310
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.93 E-value=0.0059 Score=47.59 Aligned_cols=101 Identities=14% Similarity=0.151 Sum_probs=68.2
Q ss_pred HhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCC-cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-----
Q 027517 28 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL----- 100 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~----- 100 (222)
+.....++.+||-+|+|. |..+..+++.. +. +|+++|.+++.++.+++.- .-.++..+-.++
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~--Ga~~Vi~~~~~~~~~~~a~~lG---------a~~vi~~~~~~~~~~~~ 252 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKVC--GASIIIAVDIVESRLELAKQLG---------ATHVINSKTQDPVAAIK 252 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHHH--TCSEEEEEESCHHHHHHHHHHT---------CSEEEETTTSCHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEECCCHHHHHHHHHcC---------CCEEecCCccCHHHHHH
Confidence 344667889999999986 77888888876 45 6999999999888886542 112222211111
Q ss_pred CCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 101 PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 101 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
....+.+|+|+-...- ...++...+.|+++|++++....
T Consensus 253 ~~~~gg~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~G~~ 291 (371)
T 1f8f_A 253 EITDGGVNFALESTGS------PEILKQGVDALGILGKIAVVGAP 291 (371)
T ss_dssp HHTTSCEEEEEECSCC------HHHHHHHHHTEEEEEEEEECCCC
T ss_pred HhcCCCCcEEEECCCC------HHHHHHHHHHHhcCCEEEEeCCC
Confidence 1112369999864431 35678888999999999876543
No 311
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.89 E-value=0.015 Score=42.82 Aligned_cols=108 Identities=13% Similarity=0.123 Sum_probs=70.5
Q ss_pred CCeEEEecCCCChhHHHHHHH---h---CCCCcEEEEeCChhHH---------------------------HHHh---cc
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQ---V---GSQGKVIGLDFSKNQL---------------------------SMAS---SR 78 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~---~---~~~~~~~~~D~~~~~~---------------------------~~~~---~~ 78 (222)
...|+|+|+-.|..+..++.. + ++..+++++|.-+.+- +... ++
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 348999999999988876542 2 2456899999321111 1100 00
Q ss_pred hhhhhhhcCCCeeEEeCCCCCc-C-----CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 79 QDLVSKACYKNIEWVEGDALDL-P-----FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 79 ~~~~~~~~~~~i~~~~~d~~~~-~-----~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
....+. ...++.++.+++.+. + .+..++|+|+.-.- ........++.+...|+|||.+++-++.
T Consensus 150 ~~~~g~-~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D--~Y~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 150 SDFFGH-VTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD--LYEPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp TSTTTT-SCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC--CHHHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred hhhcCC-CCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc--ccchHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 011111 016899999998763 2 23457999998763 2244567899999999999999987764
No 312
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.89 E-value=0.003 Score=50.01 Aligned_cols=67 Identities=12% Similarity=0.042 Sum_probs=48.6
Q ss_pred CCCCCeEEEecCCCChhHHHHH-HHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcC-CCeeEEeCCCC
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLS-EQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACY-KNIEWVEGDAL 98 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~ 98 (222)
..++..|+|+||+.|..+..++ +..++..+|+++|++|...+..+++......... +++.+++.-+.
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 4678899999999999999888 4433336999999999999999888764100111 36666654443
No 313
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.87 E-value=0.0045 Score=47.81 Aligned_cols=97 Identities=13% Similarity=0.123 Sum_probs=67.5
Q ss_pred HhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCc
Q 027517 28 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCF 106 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 106 (222)
...+..++.+||-+|+|. |..+..+++.. +.+|+++|.+++.++.+++.- .-.++ .+...+ . +.
T Consensus 170 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lG---------a~~v~-~~~~~~--~-~~ 234 (348)
T 3two_A 170 KFSKVTKGTKVGVAGFGGLGSMAVKYAVAM--GAEVSVFARNEHKKQDALSMG---------VKHFY-TDPKQC--K-EE 234 (348)
T ss_dssp HHTTCCTTCEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSSTTHHHHHHTT---------CSEEE-SSGGGC--C-SC
T ss_pred HhcCCCCCCEEEEECCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHhcC---------CCeec-CCHHHH--h-cC
Confidence 344678899999999976 77888888875 569999999999888887642 11222 333222 2 26
Q ss_pred eeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 107 FDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 107 ~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
+|+|+-...-. ..++...+.|+++|+++.....
T Consensus 235 ~D~vid~~g~~------~~~~~~~~~l~~~G~iv~~G~~ 267 (348)
T 3two_A 235 LDFIISTIPTH------YDLKDYLKLLTYNGDLALVGLP 267 (348)
T ss_dssp EEEEEECCCSC------CCHHHHHTTEEEEEEEEECCCC
T ss_pred CCEEEECCCcH------HHHHHHHHHHhcCCEEEEECCC
Confidence 99998644322 1356778899999999886543
No 314
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.83 E-value=0.012 Score=49.62 Aligned_cols=107 Identities=15% Similarity=0.115 Sum_probs=65.6
Q ss_pred CCCeEEEecCCCChhHHHHHHHhC------C-----CCcEEEEeC---ChhHHHHHhcchhh-----------hh-----
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVG------S-----QGKVIGLDF---SKNQLSMASSRQDL-----------VS----- 83 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~------~-----~~~~~~~D~---~~~~~~~~~~~~~~-----------~~----- 83 (222)
+.-+|+|+|-|+|.......+.+. | ..+++.+|. +++.+..+...... ..
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 345999999999998877766531 1 135899998 77777644432110 00
Q ss_pred ------hhcCCCeeEEeCCCCC-cC-CC---CCceeEEEEcccccCc-cc--HHHHHHHHhcccCCCcEEE
Q 027517 84 ------KACYKNIEWVEGDALD-LP-FS---DCFFDAITMGYGLRNV-VD--KRKALEESFRVLKPGSRIS 140 (222)
Q Consensus 84 ------~~~~~~i~~~~~d~~~-~~-~~---~~~~D~v~~~~~l~~~-~~--~~~~l~~~~~~l~~gG~l~ 140 (222)
......+++..+|+.+ ++ .. ...+|+++.-..-... |+ ...+++.+.+.++|||.+.
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~ 216 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLA 216 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEE
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEE
Confidence 0011234566677654 22 11 3579999984421111 22 2678999999999999885
No 315
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.81 E-value=0.069 Score=45.27 Aligned_cols=159 Identities=14% Similarity=0.171 Sum_probs=93.4
Q ss_pred CCCeEEEecCCCChhHHHHHHHhC-------CCCcEEEEeCChhHHHHHhcchhhhhh---------------------h
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVG-------SQGKVIGLDFSKNQLSMASSRQDLVSK---------------------A 85 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~~~---------------------~ 85 (222)
+...|+-||||.=....++....+ .+..++-+|. |+.++.-++.+...+. .
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~-p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDY-SDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFL 185 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEEC-HHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECcc-HHHHHHHHHHHHcChHHHHhhccccccccccccccccc
Confidence 456899999999888888765411 1345666665 5555554444432110 0
Q ss_pred cCCCeeEEeCCCCCcC----------C-CCCceeEEEEcccccCcc--cHHHHHHHHhcccCCCcEEEEEecCCCCC---
Q 027517 86 CYKNIEWVEGDALDLP----------F-SDCFFDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQ--- 149 (222)
Q Consensus 86 ~~~~i~~~~~d~~~~~----------~-~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~l~~gG~l~i~~~~~~~~--- 149 (222)
...+..++..|+.+.. + .....-++++-.++.+++ ...++++.+.+. ++|.+++.+...+..
T Consensus 186 ~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~~~~~~~~e~~~~~~~~d 263 (695)
T 2zwa_A 186 TTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--ENSHFIILEQLIPKGPFE 263 (695)
T ss_dssp ECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--SSEEEEEEEECCTTCTTS
T ss_pred cCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--CCceEEEEEeecCCCCCC
Confidence 0036788889998731 2 334456788888888885 356778877754 677777766554432
Q ss_pred chhhHHHHHHhhcccccccccCChhHHHHHhHHhHhhcCCHHHHHHHHHHcCCeEEEEeee
Q 027517 150 PFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYEL 210 (222)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 210 (222)
.+...+...+.... ..+ .....+.++++..+.|.++||+.+...++
T Consensus 264 ~f~~~m~~~~~~~g-----~~l----------~~~~~~~~~~~~~~~~~~~Gw~~v~~~~~ 309 (695)
T 2zwa_A 264 PFSKQMLAHFKRND-----SPL----------QSVLKYNTIESQVQRFNKLGFAYVNVGDM 309 (695)
T ss_dssp HHHHHHHHHHHHTT-----CCC----------CGGGTCCSHHHHHHHHHHTTCCEEEEEEH
T ss_pred hHHHHHHHHHHHcC-----CCC----------CccccCCCHHHHHHHHHHCCCCCcceeeH
Confidence 22222211111000 000 11123568899999999999987766543
No 316
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.80 E-value=0.0072 Score=47.59 Aligned_cols=104 Identities=15% Similarity=0.170 Sum_probs=69.8
Q ss_pred hhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCC-cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC-----cC
Q 027517 29 WSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD-----LP 101 (222)
Q Consensus 29 ~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~-----~~ 101 (222)
..+..++.+||-+|+|. |..+..+++.. +. +|+++|.+++.++.+++.- ...+...-.+ +.
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlAk~~--Ga~~Vi~~~~~~~~~~~a~~lG----------a~~i~~~~~~~~~~~v~ 247 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAASARLL--GAAVVIVGDLNPARLAHAKAQG----------FEIADLSLDTPLHEQIA 247 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTT----------CEEEETTSSSCHHHHHH
T ss_pred HcCCCCCCEEEEECCcHHHHHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHcC----------CcEEccCCcchHHHHHH
Confidence 45677899999999876 78888888875 45 6999999999888886541 1222221111 10
Q ss_pred --CCCCceeEEEEccccc---------CcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 102 --FSDCFFDAITMGYGLR---------NVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 102 --~~~~~~D~v~~~~~l~---------~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
.....+|+|+-+-.-. +.+++...++...+.|+++|++++...
T Consensus 248 ~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 248 ALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp HHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred HHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 1223699999654322 223445578888999999999977543
No 317
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.79 E-value=0.0086 Score=50.70 Aligned_cols=107 Identities=17% Similarity=0.121 Sum_probs=65.3
Q ss_pred CCCeEEEecCCCChhHHHHHHHhC------CC-----CcEEEEeC---ChhHHHHHhcchh-----------hhh-----
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVG------SQ-----GKVIGLDF---SKNQLSMASSRQD-----------LVS----- 83 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~------~~-----~~~~~~D~---~~~~~~~~~~~~~-----------~~~----- 83 (222)
+..+|+|+|.|+|.....+.+.+. |. .+++.+|. +.+.+..+..... ..+
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 446999999999999887766531 11 36899998 4455544332211 000
Q ss_pred -----h-hcCCCeeEEeCCCCC-cC-CC---CCceeEEEEcccccC-ccc--HHHHHHHHhcccCCCcEEE
Q 027517 84 -----K-ACYKNIEWVEGDALD-LP-FS---DCFFDAITMGYGLRN-VVD--KRKALEESFRVLKPGSRIS 140 (222)
Q Consensus 84 -----~-~~~~~i~~~~~d~~~-~~-~~---~~~~D~v~~~~~l~~-~~~--~~~~l~~~~~~l~~gG~l~ 140 (222)
. ...-.+++..+|+.+ ++ .. ...+|+++.-..--. -++ ...++..+.++++|||.+.
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~ 208 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFS 208 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEE
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEE
Confidence 0 011245677788765 22 11 367999998442111 122 2778899999999999875
No 318
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.69 E-value=0.01 Score=41.70 Aligned_cols=98 Identities=16% Similarity=0.199 Sum_probs=62.1
Q ss_pred hhCCCCCCeEEEecC--CCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-----C
Q 027517 29 WSGAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-----P 101 (222)
Q Consensus 29 ~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-----~ 101 (222)
..+..++++||..|+ |.|..+..+++.. +.+|+++|.+++..+.+++. + .. ..+..+-.+. .
T Consensus 33 ~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~~----g----~~-~~~d~~~~~~~~~~~~ 101 (198)
T 1pqw_A 33 VGRLSPGERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLSRL----G----VE-YVGDSRSVDFADEILE 101 (198)
T ss_dssp TSCCCTTCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHTT----C----CS-EEEETTCSTHHHHHHH
T ss_pred HhCCCCCCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHc----C----CC-EEeeCCcHHHHHHHHH
Confidence 345678899999995 3466666666664 56899999998877766542 1 11 1121111111 0
Q ss_pred -CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 102 -FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 102 -~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
...+.+|+++.+.. ...++...+.|+++|+++....
T Consensus 102 ~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 102 LTDGYGVDVVLNSLA-------GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp HTTTCCEEEEEECCC-------THHHHHHHHTEEEEEEEEECSC
T ss_pred HhCCCCCeEEEECCc-------hHHHHHHHHHhccCCEEEEEcC
Confidence 11235999997543 2457788899999999887543
No 319
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.68 E-value=0.023 Score=43.52 Aligned_cols=75 Identities=12% Similarity=0.034 Sum_probs=53.9
Q ss_pred CCeEEEecCCCChhHHHHHHHhCCCCc-E-EEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC---CCCceeE
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQVGSQGK-V-IGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF---SDCFFDA 109 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~~~~~~~-~-~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~D~ 109 (222)
..+++|+-||.|.++.-+.+. +-..+ + .++|+++.+.+.-+.+.. .. ++..|+.++.. +...+|+
T Consensus 10 ~~~vidLFaG~GG~~~G~~~a-G~~~~~v~~a~e~d~~a~~ty~~N~~--------~~-~~~~DI~~~~~~~i~~~~~Di 79 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERS-SININATFIPFDINEIANKIYSKNFK--------EE-VQVKNLDSISIKQIESLNCNT 79 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHS-SCCCCEEEEEECCCHHHHHHHHHHHC--------CC-CBCCCTTTCCHHHHHHTCCCE
T ss_pred CCEEEEECCChhHHHHHHHHc-CCCceEEEEEEECCHHHHHHHHHHCC--------CC-cccCChhhcCHHHhccCCCCE
Confidence 458999999999999988765 22134 5 699999999888777752 22 56678877532 2225899
Q ss_pred EEEcccccCc
Q 027517 110 ITMGYGLRNV 119 (222)
Q Consensus 110 v~~~~~l~~~ 119 (222)
++.......+
T Consensus 80 l~ggpPCQ~f 89 (327)
T 3qv2_A 80 WFMSPPCQPY 89 (327)
T ss_dssp EEECCCCTTC
T ss_pred EEecCCccCc
Confidence 9987776655
No 320
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.61 E-value=0.0089 Score=45.96 Aligned_cols=101 Identities=14% Similarity=0.147 Sum_probs=68.5
Q ss_pred HhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC----C
Q 027517 28 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----F 102 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~ 102 (222)
......++.+||-.|+|. |..+..+++.. +.+|+++|.+++.++.+++.- .-.++...-.+.. .
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lG---------a~~~i~~~~~~~~~~~~~ 228 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYARAM--GLRVAAVDIDDAKLNLARRLG---------AEVAVNARDTDPAAWLQK 228 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTT---------CSEEEETTTSCHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHcC---------CCEEEeCCCcCHHHHHHH
Confidence 445677899999999986 88888888885 569999999999888877642 1122222111110 0
Q ss_pred CCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 103 SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
..+.+|+|+-... -...++...+.|+++|+++.....
T Consensus 229 ~~g~~d~vid~~g------~~~~~~~~~~~l~~~G~iv~~G~~ 265 (340)
T 3s2e_A 229 EIGGAHGVLVTAV------SPKAFSQAIGMVRRGGTIALNGLP 265 (340)
T ss_dssp HHSSEEEEEESSC------CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred hCCCCCEEEEeCC------CHHHHHHHHHHhccCCEEEEeCCC
Confidence 1125888876432 145678888999999999876443
No 321
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.53 E-value=0.0027 Score=49.00 Aligned_cols=75 Identities=16% Similarity=0.162 Sum_probs=54.6
Q ss_pred CeEEEecCCCChhHHHHHHHhCCC-CcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC---CCCceeEEE
Q 027517 36 DNVLDVCCGSGDLSFLLSEQVGSQ-GKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF---SDCFFDAIT 111 (222)
Q Consensus 36 ~~vLdiG~G~G~~~~~l~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~D~v~ 111 (222)
.+|+|+.||.|.++..+... +-. ..+.++|+++.+++..+.+. ++..++.+|+.++.. +...+|+++
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~-G~~~~~v~~~E~d~~a~~~~~~N~--------~~~~~~~~Di~~~~~~~~~~~~~D~l~ 73 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRES-CIPAQVVAAIDVNTVANEVYKYNF--------PHTQLLAKTIEGITLEEFDRLSFDMIL 73 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHC--------TTSCEECSCGGGCCHHHHHHHCCSEEE
T ss_pred CeEEEeCcCccHHHHHHHHC-CCCceEEEEEeCCHHHHHHHHHhc--------cccccccCCHHHccHhHcCcCCcCEEE
Confidence 48999999999999998876 211 25899999999999988876 355677888887631 111589999
Q ss_pred EcccccCc
Q 027517 112 MGYGLRNV 119 (222)
Q Consensus 112 ~~~~l~~~ 119 (222)
.......+
T Consensus 74 ~gpPCq~f 81 (343)
T 1g55_A 74 MSPPCQPF 81 (343)
T ss_dssp ECCC----
T ss_pred EcCCCcch
Confidence 87765444
No 322
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.51 E-value=0.011 Score=45.65 Aligned_cols=102 Identities=17% Similarity=0.243 Sum_probs=68.1
Q ss_pred HhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCC-cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-----
Q 027517 28 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL----- 100 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~----- 100 (222)
......++.+||-+|+|. |..+..+++.. +. +|+++|.+++.++.+++.- .-.++..+-.++
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~lG---------a~~vi~~~~~~~~~~v~ 228 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHL--GAGRIFAVGSRKHCCDIALEYG---------ATDIINYKNGDIVEQIL 228 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTT--TCSSEEEECCCHHHHHHHHHHT---------CCEEECGGGSCHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCcEEEEECCCHHHHHHHHHhC---------CceEEcCCCcCHHHHHH
Confidence 556678899999999876 77778888774 55 7999999998888877642 112222111111
Q ss_pred C-CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCC
Q 027517 101 P-FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 101 ~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
. .....+|+|+-...- ...++...+.|+++|+++......
T Consensus 229 ~~t~g~g~D~v~d~~g~------~~~~~~~~~~l~~~G~~v~~G~~~ 269 (352)
T 3fpc_A 229 KATDGKGVDKVVIAGGD------VHTFAQAVKMIKPGSDIGNVNYLG 269 (352)
T ss_dssp HHTTTCCEEEEEECSSC------TTHHHHHHHHEEEEEEEEECCCCC
T ss_pred HHcCCCCCCEEEECCCC------hHHHHHHHHHHhcCCEEEEecccC
Confidence 0 123469999864332 235677888999999998765443
No 323
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.49 E-value=0.017 Score=44.71 Aligned_cols=100 Identities=16% Similarity=0.261 Sum_probs=66.8
Q ss_pred HhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCC-cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCC---CCC---
Q 027517 28 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGD---ALD--- 99 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d---~~~--- 99 (222)
......++.+||-+|+|. |..+..+++.. +. +|+++|.+++.++.+++.-. . .++..+ ..+
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~lGa--------~-~vi~~~~~~~~~~~~ 233 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAM--GAAQVVVTDLSATRLSKAKEIGA--------D-LVLQISKESPQEIAR 233 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTTC--------S-EEEECSSCCHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHhCC--------C-EEEcCcccccchHHH
Confidence 445678899999999876 77888888875 55 89999999988888775421 1 222221 011
Q ss_pred -c-CCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 100 -L-PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 100 -~-~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
+ ....+.+|+|+-.-.- ...++...+.|+++|+++....
T Consensus 234 ~i~~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 234 KVEGQLGCKPEVTIECTGA------EASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp HHHHHHTSCCSEEEECSCC------HHHHHHHHHHSCTTCEEEECSC
T ss_pred HHHHHhCCCCCEEEECCCC------hHHHHHHHHHhcCCCEEEEEec
Confidence 1 0001458999864431 3456778889999999987654
No 324
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.48 E-value=0.017 Score=44.34 Aligned_cols=100 Identities=16% Similarity=0.084 Sum_probs=65.4
Q ss_pred HhhCCCCCCeEEEecCC--CChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC----
Q 027517 28 SWSGAKTGDNVLDVCCG--SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---- 101 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G--~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---- 101 (222)
+.....++.+||-.|+| .|..+..+++.. +.+|+++|.+++.++.+++.- .-..+...-.++.
T Consensus 138 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~lg---------a~~~~~~~~~~~~~~~~ 206 (340)
T 3gms_A 138 ETLNLQRNDVLLVNACGSAIGHLFAQLSQIL--NFRLIAVTRNNKHTEELLRLG---------AAYVIDTSTAPLYETVM 206 (340)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHHHT---------CSEEEETTTSCHHHHHH
T ss_pred HhcccCCCCEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhCC---------CcEEEeCCcccHHHHHH
Confidence 45567889999999987 477788888875 569999999998888877642 1122222111110
Q ss_pred --CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 102 --FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 102 --~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
.....+|+|+-+..-. ......+.|+++|+++.....
T Consensus 207 ~~~~~~g~Dvvid~~g~~-------~~~~~~~~l~~~G~iv~~G~~ 245 (340)
T 3gms_A 207 ELTNGIGADAAIDSIGGP-------DGNELAFSLRPNGHFLTIGLL 245 (340)
T ss_dssp HHTTTSCEEEEEESSCHH-------HHHHHHHTEEEEEEEEECCCT
T ss_pred HHhCCCCCcEEEECCCCh-------hHHHHHHHhcCCCEEEEEeec
Confidence 1234699998754321 123344789999999886544
No 325
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.44 E-value=0.029 Score=43.70 Aligned_cols=101 Identities=22% Similarity=0.216 Sum_probs=68.7
Q ss_pred HhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCC-cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-----
Q 027517 28 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL----- 100 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~----- 100 (222)
......++.+||-.|+|. |..+..+++.. +. +|+++|.+++..+.+++.- .-.++...-.++
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~lG---------a~~vi~~~~~~~~~~i~ 244 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLA--GATTVILSTRQATKRRLAEEVG---------ATATVDPSAGDVVEAIA 244 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHT---------CSEEECTTSSCHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHcC---------CCEEECCCCcCHHHHHH
Confidence 556778899999999876 77788888875 55 8999999999888877642 112222111111
Q ss_pred C---CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 101 P---FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 101 ~---~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
. ...+.+|+|+-+..- ...++...+.|++||++++....
T Consensus 245 ~~~~~~~gg~Dvvid~~G~------~~~~~~~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 245 GPVGLVPGGVDVVIECAGV------AETVKQSTRLAKAGGTVVILGVL 286 (370)
T ss_dssp STTSSSTTCEEEEEECSCC------HHHHHHHHHHEEEEEEEEECSCC
T ss_pred hhhhccCCCCCEEEECCCC------HHHHHHHHHHhccCCEEEEEecc
Confidence 1 222369999864321 35677888899999999876544
No 326
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=96.39 E-value=0.0091 Score=45.39 Aligned_cols=93 Identities=14% Similarity=0.028 Sum_probs=62.4
Q ss_pred HhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCc
Q 027517 28 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCF 106 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 106 (222)
...+..++.+||-+|+|. |..+..+++.. +.+|++++ +++.++.+++.- .-.++ .|...+ .+.
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~-~~~~~~~~~~lG---------a~~v~-~d~~~v---~~g 199 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNA--GYVVDLVS-ASLSQALAAKRG---------VRHLY-REPSQV---TQK 199 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHH--TCEEEEEC-SSCCHHHHHHHT---------EEEEE-SSGGGC---CSC
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEE-ChhhHHHHHHcC---------CCEEE-cCHHHh---CCC
Confidence 455678899999999965 78888888886 55999999 888888876641 11222 242222 457
Q ss_pred eeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEe
Q 027517 107 FDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 107 ~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
+|+|+-+-.-. .+....+.|+++|+++...
T Consensus 200 ~Dvv~d~~g~~-------~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 200 YFAIFDAVNSQ-------NAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp EEEEECC--------------TTGGGEEEEEEEEEEC
T ss_pred ccEEEECCCch-------hHHHHHHHhcCCCEEEEEe
Confidence 99998543211 1245778999999998763
No 327
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=96.38 E-value=0.0099 Score=47.02 Aligned_cols=47 Identities=15% Similarity=0.153 Sum_probs=36.5
Q ss_pred CCeEEEecCCCChhHHHHHHHhCC----CCcEEEEeCChhHHHHHhcchhh
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQVGS----QGKVIGLDFSKNQLSMASSRQDL 81 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~ 81 (222)
...|+|+|+|+|.++..+++.+.. ..++..+|+|+...+.-++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 469999999999998887765421 23799999999888777776643
No 328
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.35 E-value=0.049 Score=42.17 Aligned_cols=103 Identities=17% Similarity=0.221 Sum_probs=69.6
Q ss_pred HhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCCc-EEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCC---CCc--
Q 027517 28 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGK-VIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA---LDL-- 100 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~---~~~-- 100 (222)
...+..++.+||-+|+|. |..+..+++.. +.+ |+++|.+++.++.+++. . ..+.....+. .++
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~l-~-------~~~~~~~~~~~~~~~~~~ 242 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAA--GACPLVITDIDEGRLKFAKEI-C-------PEVVTHKVERLSAEESAK 242 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHT--TCCSEEEEESCHHHHHHHHHH-C-------TTCEEEECCSCCHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh-c-------hhcccccccccchHHHHH
Confidence 456778899999999876 77888888875 455 99999999998888865 2 1222222111 111
Q ss_pred ----CCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCC
Q 027517 101 ----PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 101 ----~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
......+|+|+-...- ...+....+.|+++|++++.....
T Consensus 243 ~v~~~t~g~g~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~G~~~ 286 (363)
T 3m6i_A 243 KIVESFGGIEPAVALECTGV------ESSIAAAIWAVKFGGKVFVIGVGK 286 (363)
T ss_dssp HHHHHTSSCCCSEEEECSCC------HHHHHHHHHHSCTTCEEEECCCCC
T ss_pred HHHHHhCCCCCCEEEECCCC------hHHHHHHHHHhcCCCEEEEEccCC
Confidence 0123468999864331 346778888999999998865443
No 329
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.32 E-value=0.042 Score=42.42 Aligned_cols=100 Identities=16% Similarity=0.179 Sum_probs=66.4
Q ss_pred HhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCC-CCc----C
Q 027517 28 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA-LDL----P 101 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~-~~~----~ 101 (222)
...+..++.+||-+|+|. |..+..+++.. +.+|+++|.+++.++.+++.-. . .++..+- .+. .
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lGa--------~-~~~~~~~~~~~~~~i~ 230 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAY--GAFVVCTARSPRRLEVAKNCGA--------D-VTLVVDPAKEEESSII 230 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTC--------S-EEEECCTTTSCHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHhCC--------C-EEEcCcccccHHHHHH
Confidence 445678899999999875 77778888875 5579999999998888765421 1 2222110 111 0
Q ss_pred --CC---CCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 102 --FS---DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 102 --~~---~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
.. .+.+|+|+-+..- ...++...+.|+++|+++....
T Consensus 231 ~~~~~~~g~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 231 ERIRSAIGDLPNVTIDCSGN------EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp HHHHHHSSSCCSEEEECSCC------HHHHHHHHHHSCTTCEEEECSC
T ss_pred HHhccccCCCCCEEEECCCC------HHHHHHHHHHHhcCCEEEEEec
Confidence 11 2458999864431 3456778889999999987654
No 330
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.31 E-value=0.021 Score=44.30 Aligned_cols=101 Identities=21% Similarity=0.163 Sum_probs=67.7
Q ss_pred HhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-----
Q 027517 28 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----- 101 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----- 101 (222)
+.....++.+||-+|+|. |..+..+++.. +.+++++|.+++.++.+++.- .-.++..+..++.
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lG---------a~~vi~~~~~~~~~~v~~ 251 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKAT--GAEVIVTSSSREKLDRAFALG---------ADHGINRLEEDWVERVYA 251 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHT---------CSEEEETTTSCHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEecCchhHHHHHHcC---------CCEEEcCCcccHHHHHHH
Confidence 445677899999999886 77788888875 569999999998888876542 1122222212210
Q ss_pred -CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCC
Q 027517 102 -FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 102 -~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
.....+|+|+-+..- ..+....+.|+++|++++.....
T Consensus 252 ~~~g~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G~~~ 290 (363)
T 3uog_A 252 LTGDRGADHILEIAGG-------AGLGQSLKAVAPDGRISVIGVLE 290 (363)
T ss_dssp HHTTCCEEEEEEETTS-------SCHHHHHHHEEEEEEEEEECCCS
T ss_pred HhCCCCceEEEECCCh-------HHHHHHHHHhhcCCEEEEEecCC
Confidence 123469999965541 13556777899999998875443
No 331
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.31 E-value=0.026 Score=43.98 Aligned_cols=97 Identities=20% Similarity=0.201 Sum_probs=64.2
Q ss_pred hCCCCCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC-c-CCCCCc
Q 027517 30 SGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD-L-PFSDCF 106 (222)
Q Consensus 30 ~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~-~-~~~~~~ 106 (222)
....++.+||-+|+|. |..+..+++.. +.+|+++|.+++.++.+++.- .-.++...-.+ . ... +.
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~Vi~~~~~~~~~~~a~~lG---------a~~vi~~~~~~~~~~~~-~g 257 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAKALG---------ADEVVNSRNADEMAAHL-KS 257 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHT---------CSEEEETTCHHHHHTTT-TC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcC---------CcEEeccccHHHHHHhh-cC
Confidence 4677899999999975 77778888875 568999999999888877531 11222211111 0 111 46
Q ss_pred eeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 107 FDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 107 ~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
+|+|+-...-. ..++...+.|+++|+++....
T Consensus 258 ~Dvvid~~g~~------~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 258 FDFILNTVAAP------HNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp EEEEEECCSSC------CCHHHHHTTEEEEEEEEECCC
T ss_pred CCEEEECCCCH------HHHHHHHHHhccCCEEEEecc
Confidence 99998654321 135567789999999877543
No 332
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=96.24 E-value=0.041 Score=43.00 Aligned_cols=81 Identities=11% Similarity=0.076 Sum_probs=51.8
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhC------CCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCC
Q 027517 31 GAKTGDNVLDVCCGSGDLSFLLSEQVG------SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 104 (222)
Q Consensus 31 ~~~~~~~vLdiG~G~G~~~~~l~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 104 (222)
..+....|+|+|+|.|.++..+++.+. ...++..+|+|+...+.-++++... .++.+. .++.++| .
T Consensus 77 g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~-----~~v~W~-~~l~~lp--~ 148 (387)
T 1zkd_A 77 DEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI-----RNIHWH-DSFEDVP--E 148 (387)
T ss_dssp TCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC-----SSEEEE-SSGGGSC--C
T ss_pred CCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC-----CCeEEe-CChhhcC--C
Confidence 334445799999999999988876542 2237999999998877666555321 245443 2333443 1
Q ss_pred CceeEEEEcccccCcc
Q 027517 105 CFFDAITMGYGLRNVV 120 (222)
Q Consensus 105 ~~~D~v~~~~~l~~~~ 120 (222)
. .-+|+++.++..+|
T Consensus 149 ~-~~~viANE~fDAlP 163 (387)
T 1zkd_A 149 G-PAVILANEYFDVLP 163 (387)
T ss_dssp S-SEEEEEESSGGGSC
T ss_pred C-CeEEEeccccccCc
Confidence 2 35677777766665
No 333
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.22 E-value=0.043 Score=42.82 Aligned_cols=101 Identities=15% Similarity=0.156 Sum_probs=68.1
Q ss_pred HhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCC-cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCC--CCCc---
Q 027517 28 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGD--ALDL--- 100 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d--~~~~--- 100 (222)
......++.+||-+|+|. |..+..+++.. +. +|+++|.+++.++.+++.- .-.++... -.++
T Consensus 187 ~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~--Ga~~Vi~~~~~~~~~~~a~~lG---------a~~vi~~~~~~~~~~~~ 255 (378)
T 3uko_A 187 NTAKVEPGSNVAIFGLGTVGLAVAEGAKTA--GASRIIGIDIDSKKYETAKKFG---------VNEFVNPKDHDKPIQEV 255 (378)
T ss_dssp TTTCCCTTCCEEEECCSHHHHHHHHHHHHH--TCSCEEEECSCTTHHHHHHTTT---------CCEEECGGGCSSCHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHHcC---------CcEEEccccCchhHHHH
Confidence 445677889999999975 77888888876 44 7999999999998887642 11222211 1111
Q ss_pred --CCCCCceeEEEEcccccCcccHHHHHHHHhcccCCC-cEEEEEecC
Q 027517 101 --PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPG-SRISVLDFN 145 (222)
Q Consensus 101 --~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~g-G~l~i~~~~ 145 (222)
....+.+|+|+-...- ...++...+.+++| |++++....
T Consensus 256 i~~~~~gg~D~vid~~g~------~~~~~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 256 IVDLTDGGVDYSFECIGN------VSVMRAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp HHHHTTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECSCC
T ss_pred HHHhcCCCCCEEEECCCC------HHHHHHHHHHhhccCCEEEEEccc
Confidence 1112369999864331 45678888999997 999876543
No 334
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.20 E-value=0.024 Score=43.25 Aligned_cols=99 Identities=17% Similarity=0.143 Sum_probs=65.9
Q ss_pred hhCCCCCCeEEEec-CC-CChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc------
Q 027517 29 WSGAKTGDNVLDVC-CG-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL------ 100 (222)
Q Consensus 29 ~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~------ 100 (222)
.....++.+||-.| +| .|..+..+++.. +.++++++.+++.++.+++.- .-..+..+-.++
T Consensus 135 ~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~G---------a~~~~~~~~~~~~~~~~~ 203 (325)
T 3jyn_A 135 TYQVKPGEIILFHAAAGGVGSLACQWAKAL--GAKLIGTVSSPEKAAHAKALG---------AWETIDYSHEDVAKRVLE 203 (325)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHHT---------CSEEEETTTSCHHHHHHH
T ss_pred hcCCCCCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcC---------CCEEEeCCCccHHHHHHH
Confidence 34667899999999 34 477788888875 569999999998888877531 112222221111
Q ss_pred CCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 101 PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 101 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
......+|+|+-+..- ..+....+.|+++|+++.....
T Consensus 204 ~~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 204 LTDGKKCPVVYDGVGQ-------DTWLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp HTTTCCEEEEEESSCG-------GGHHHHHTTEEEEEEEEECCCT
T ss_pred HhCCCCceEEEECCCh-------HHHHHHHHHhcCCCEEEEEecC
Confidence 0123469999875542 2466778899999999886544
No 335
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.14 E-value=0.033 Score=42.67 Aligned_cols=100 Identities=13% Similarity=0.079 Sum_probs=66.1
Q ss_pred HhhCCCCCCeEEEecCC--CChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-----
Q 027517 28 SWSGAKTGDNVLDVCCG--SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL----- 100 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G--~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~----- 100 (222)
+.....++++||-.|++ .|..+..+++.. +.+|++++.+++.++.+.+.+. .-..+...-.+.
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~~g--------~~~~~~~~~~~~~~~~~ 212 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLK--GCRVVGIAGGAEKCRFLVEELG--------FDGAIDYKNEDLAAGLK 212 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTC--------CSEEEETTTSCHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcC--------CCEEEECCCHHHHHHHH
Confidence 45577889999999983 477777777774 5699999999988887733221 112222111111
Q ss_pred CCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 101 PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 101 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
....+.+|+|+-+.. ...+....+.|+++|++++...
T Consensus 213 ~~~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 213 RECPKGIDVFFDNVG-------GEILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp HHCTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECCC
T ss_pred HhcCCCceEEEECCC-------cchHHHHHHHHhhCCEEEEEee
Confidence 011246999987554 1367888899999999987643
No 336
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.12 E-value=0.018 Score=44.03 Aligned_cols=72 Identities=17% Similarity=0.196 Sum_probs=52.7
Q ss_pred CCeEEEecCCCChhHHHHHHHhCCCC-cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC-CCCceeEEEE
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF-SDCFFDAITM 112 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~D~v~~ 112 (222)
+.+++|+.||.|.++.-+... +. .+.++|+++.+.+..+.+.. ... .+|+.++.. .-..+|+|+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a---G~~~v~~~e~d~~a~~t~~~N~~--------~~~--~~Di~~~~~~~~~~~D~l~~ 77 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC---GAECVYSNEWDKYAQEVYEMNFG--------EKP--EGDITQVNEKTIPDHDILCA 77 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT---TCEEEEEECCCHHHHHHHHHHHS--------CCC--BSCGGGSCGGGSCCCSEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHC---CCeEEEEEeCCHHHHHHHHHHcC--------CCC--cCCHHHcCHhhCCCCCEEEE
Confidence 468999999999999988765 34 57899999999988887752 222 577776532 1135899998
Q ss_pred cccccCc
Q 027517 113 GYGLRNV 119 (222)
Q Consensus 113 ~~~l~~~ 119 (222)
......+
T Consensus 78 gpPCQ~f 84 (327)
T 2c7p_A 78 GFPCQAF 84 (327)
T ss_dssp ECCCTTT
T ss_pred CCCCCCc
Confidence 7665555
No 337
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.07 E-value=0.19 Score=38.56 Aligned_cols=106 Identities=18% Similarity=0.252 Sum_probs=67.5
Q ss_pred HHHhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC---
Q 027517 26 AVSWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP--- 101 (222)
Q Consensus 26 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--- 101 (222)
........++.+||-.|+|. |..+..+++..+ ...++++|.+++-++.+++.- ....+...-.+..
T Consensus 152 ~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~~k~~~a~~lG---------a~~~i~~~~~~~~~~~ 221 (346)
T 4a2c_A 152 AFHLAQGCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISSEKLALAKSFG---------AMQTFNSSEMSAPQMQ 221 (346)
T ss_dssp HHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHHTT---------CSEEEETTTSCHHHHH
T ss_pred HHHHhccCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechHHHHHHHHHcC---------CeEEEeCCCCCHHHHH
Confidence 34445677899999999986 556677777752 235789999999888887652 2233322211110
Q ss_pred ---CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCCC
Q 027517 102 ---FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKS 147 (222)
Q Consensus 102 ---~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~~ 147 (222)
.....+|+|+-... ....++...+.++++|.+++......
T Consensus 222 ~~~~~~~g~d~v~d~~G------~~~~~~~~~~~l~~~G~~v~~g~~~~ 264 (346)
T 4a2c_A 222 SVLRELRFNQLILETAG------VPQTVELAVEIAGPHAQLALVGTLHQ 264 (346)
T ss_dssp HHHGGGCSSEEEEECSC------SHHHHHHHHHHCCTTCEEEECCCCSS
T ss_pred HhhcccCCccccccccc------ccchhhhhhheecCCeEEEEEeccCC
Confidence 11234787775432 14567778889999999987655443
No 338
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.05 E-value=0.056 Score=42.07 Aligned_cols=101 Identities=13% Similarity=0.111 Sum_probs=66.8
Q ss_pred HhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCC-cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCC--CCc---
Q 027517 28 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA--LDL--- 100 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~--~~~--- 100 (222)
...+..++.+||-+|+|. |..+..+++.. +. +|+++|.+++.++.+++.- .-.++..+- .++
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~lG---------a~~vi~~~~~~~~~~~~ 253 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFGLGGVGFSAIVGCKAA--GASRIIGVGTHKDKFPKAIELG---------ATECLNPKDYDKPIYEV 253 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHH--TCSEEEEECSCGGGHHHHHHTT---------CSEEECGGGCSSCHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEECCCHHHHHHHHHcC---------CcEEEecccccchHHHH
Confidence 345667889999999876 77788888876 45 7999999999888877542 112221110 111
Q ss_pred --CCCCCceeEEEEcccccCcccHHHHHHHHhcccCCC-cEEEEEecC
Q 027517 101 --PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPG-SRISVLDFN 145 (222)
Q Consensus 101 --~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~g-G~l~i~~~~ 145 (222)
....+.+|+|+-.-.- ...++...+.|+++ |+++.....
T Consensus 254 i~~~t~gg~Dvvid~~g~------~~~~~~~~~~l~~~~G~iv~~G~~ 295 (373)
T 1p0f_A 254 ICEKTNGGVDYAVECAGR------IETMMNALQSTYCGSGVTVVLGLA 295 (373)
T ss_dssp HHHHTTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECCCC
T ss_pred HHHHhCCCCCEEEECCCC------HHHHHHHHHHHhcCCCEEEEEccC
Confidence 0112368999864321 34677888999999 998876543
No 339
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.02 E-value=0.059 Score=42.45 Aligned_cols=100 Identities=14% Similarity=0.095 Sum_probs=63.0
Q ss_pred CCCCCCeEEEecCCC-ChhHHHHHHHhCCCC-cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-----C-C
Q 027517 31 GAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-----P-F 102 (222)
Q Consensus 31 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-----~-~ 102 (222)
...++.+||-+|+|. |..+..+++.. +. +|+++|.+++-++.+++.- .-.++..+-.++ . .
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~~~~lG---------a~~vi~~~~~~~~~~i~~~t 278 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHA--GASKVILSEPSEVRRNLAKELG---------ADHVIDPTKENFVEAVLDYT 278 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHT---------CSEEECTTTSCHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHcC---------CCEEEcCCCCCHHHHHHHHh
Confidence 467889999999875 77778888875 55 8999999999888887642 112222211121 0 1
Q ss_pred CCCceeEEEEcccccCcccHHHHHHHHh----cccCCCcEEEEEecCC
Q 027517 103 SDCFFDAITMGYGLRNVVDKRKALEESF----RVLKPGSRISVLDFNK 146 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~----~~l~~gG~l~i~~~~~ 146 (222)
....+|+|+-.-. .....+..+. +.++++|++++.....
T Consensus 279 ~g~g~D~vid~~g-----~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~ 321 (404)
T 3ip1_A 279 NGLGAKLFLEATG-----VPQLVWPQIEEVIWRARGINATVAIVARAD 321 (404)
T ss_dssp TTCCCSEEEECSS-----CHHHHHHHHHHHHHHCSCCCCEEEECSCCC
T ss_pred CCCCCCEEEECCC-----CcHHHHHHHHHHHHhccCCCcEEEEeCCCC
Confidence 2346999985432 1222333444 4449999998865443
No 340
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.96 E-value=0.039 Score=42.21 Aligned_cols=100 Identities=17% Similarity=0.135 Sum_probs=64.0
Q ss_pred HhhCCCCCCeEEEecC--CCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-----
Q 027517 28 SWSGAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL----- 100 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~----- 100 (222)
+.....++.+||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++. + ....+-..+..+.
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~~----g----~~~~~d~~~~~~~~~~~~ 208 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYLKQI----G----FDAAFNYKTVNSLEEALK 208 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHT----T----CSEEEETTSCSCHHHHHH
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhc----C----CcEEEecCCHHHHHHHHH
Confidence 3446678899999997 4466677777663 56999999998888777432 1 1111111111111
Q ss_pred CCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 101 PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 101 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
....+.+|+++.+..- ..++...+.|+++|++++...
T Consensus 209 ~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 209 KASPDGYDCYFDNVGG-------EFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp HHCTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEECCC
T ss_pred HHhCCCCeEEEECCCh-------HHHHHHHHHHhcCCEEEEEec
Confidence 0112469999876542 347788899999999987643
No 341
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.95 E-value=0.024 Score=43.27 Aligned_cols=54 Identities=15% Similarity=0.196 Sum_probs=43.3
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhh
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDL 81 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (222)
+.++... ..++..|||.-||+|..+....+. +.+++|+|+++...+.+++++..
T Consensus 243 ~~~i~~~-~~~~~~VlDpF~GsGtt~~aa~~~---gr~~ig~e~~~~~~~~~~~r~~~ 296 (323)
T 1boo_A 243 EFFIRML-TEPDDLVVDIFGGSNTTGLVAERE---SRKWISFEMKPEYVAASAFRFLD 296 (323)
T ss_dssp HHHHHHH-CCTTCEEEETTCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHGGGSC
T ss_pred HHHHHHh-CCCCCEEEECCCCCCHHHHHHHHc---CCCEEEEeCCHHHHHHHHHHHHh
Confidence 3344433 367889999999999998876654 56999999999999999999754
No 342
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.94 E-value=0.052 Score=42.28 Aligned_cols=101 Identities=10% Similarity=0.144 Sum_probs=66.2
Q ss_pred HhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCC-cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCC--CCc---
Q 027517 28 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA--LDL--- 100 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~--~~~--- 100 (222)
......++.+||-+|+|. |..+..+++.. +. +|+++|.+++.++.+++.- .-.++...- .++
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~lG---------a~~vi~~~~~~~~~~~~ 254 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSA--GAKRIIAVDLNPDKFEKAKVFG---------ATDFVNPNDHSEPISQV 254 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTT---------CCEEECGGGCSSCHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEEcCCHHHHHHHHHhC---------CceEEeccccchhHHHH
Confidence 344667889999999875 77778888875 55 7999999999888877541 111221110 111
Q ss_pred --CCCCCceeEEEEcccccCcccHHHHHHHHhcccCCC-cEEEEEecC
Q 027517 101 --PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPG-SRISVLDFN 145 (222)
Q Consensus 101 --~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~g-G~l~i~~~~ 145 (222)
....+.+|+|+-+..- ...++...+.|+++ |+++.....
T Consensus 255 ~~~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G~~ 296 (374)
T 1cdo_A 255 LSKMTNGGVDFSLECVGN------VGVMRNALESCLKGWGVSVLVGWT 296 (374)
T ss_dssp HHHHHTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECSCC
T ss_pred HHHHhCCCCCEEEECCCC------HHHHHHHHHHhhcCCcEEEEEcCC
Confidence 0111368999864421 34677888999999 998876543
No 343
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.93 E-value=0.065 Score=41.65 Aligned_cols=101 Identities=15% Similarity=0.163 Sum_probs=66.5
Q ss_pred HhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCC-cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCC--CCc---
Q 027517 28 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA--LDL--- 100 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~--~~~--- 100 (222)
......++.+||-+|+|. |..+..+++.. +. +|+++|.+++.++.+++.- .-.++...- .++
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla~~~--Ga~~Vi~~~~~~~~~~~~~~lG---------a~~vi~~~~~~~~~~~~ 252 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGCKVA--GASRIIGVDINKDKFARAKEFG---------ATECINPQDFSKPIQEV 252 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHH--TCSEEEEECSCGGGHHHHHHHT---------CSEEECGGGCSSCHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHHcC---------CceEeccccccccHHHH
Confidence 344667889999999875 77778888876 45 7999999999888877541 111221110 111
Q ss_pred --CCCCCceeEEEEcccccCcccHHHHHHHHhcccCCC-cEEEEEecC
Q 027517 101 --PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPG-SRISVLDFN 145 (222)
Q Consensus 101 --~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~g-G~l~i~~~~ 145 (222)
....+.+|+|+-+..- ...++...+.|+++ |+++.....
T Consensus 253 v~~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G~~ 294 (373)
T 2fzw_A 253 LIEMTDGGVDYSFECIGN------VKVMRAALEACHKGWGVSVVVGVA 294 (373)
T ss_dssp HHHHTTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECSCC
T ss_pred HHHHhCCCCCEEEECCCc------HHHHHHHHHhhccCCcEEEEEecC
Confidence 0112368999864431 34677888999999 999876543
No 344
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.91 E-value=0.065 Score=41.70 Aligned_cols=101 Identities=13% Similarity=0.134 Sum_probs=66.0
Q ss_pred HhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCC-cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCC--CCc---
Q 027517 28 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA--LDL--- 100 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~--~~~--- 100 (222)
......++.+||-+|+|. |..+..+++.. +. +|+++|.+++.++.+++.- .-.++..+- .++
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~lG---------a~~vi~~~~~~~~~~~~ 253 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAA--GAARIIGVDINKDKFAKAKEVG---------ATECVNPQDYKKPIQEV 253 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTT---------CSEEECGGGCSSCHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHHhC---------CceEecccccchhHHHH
Confidence 344667889999999876 77778888875 55 7999999999888876531 111221110 111
Q ss_pred --CCCCCceeEEEEcccccCcccHHHHHHHHhcccCCC-cEEEEEecC
Q 027517 101 --PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPG-SRISVLDFN 145 (222)
Q Consensus 101 --~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~g-G~l~i~~~~ 145 (222)
....+.+|+|+-+..- ...++...+.|+++ |++++....
T Consensus 254 ~~~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G~~ 295 (374)
T 2jhf_A 254 LTEMSNGGVDFSFEVIGR------LDTMVTALSCCQEAYGVSVIVGVP 295 (374)
T ss_dssp HHHHTTSCBSEEEECSCC------HHHHHHHHHHBCTTTCEEEECSCC
T ss_pred HHHHhCCCCcEEEECCCC------HHHHHHHHHHhhcCCcEEEEeccC
Confidence 0112368999864421 34577888899999 998876443
No 345
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.90 E-value=0.047 Score=42.03 Aligned_cols=100 Identities=21% Similarity=0.171 Sum_probs=65.4
Q ss_pred HhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCC-cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-----
Q 027517 28 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL----- 100 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~----- 100 (222)
...+. ++.+||-+|+|. |..+..+++.. +. +|+++|.+++.++.+++.- .-.++..+-.++
T Consensus 162 ~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~~G---------a~~~~~~~~~~~~~~v~ 229 (348)
T 2d8a_A 162 LAGPI-SGKSVLITGAGPLGLLGIAVAKAS--GAYPVIVSEPSDFRRELAKKVG---------ADYVINPFEEDVVKEVM 229 (348)
T ss_dssp TTSCC-TTCCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHHHHHHHT---------CSEEECTTTSCHHHHHH
T ss_pred HhcCC-CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHhC---------CCEEECCCCcCHHHHHH
Confidence 33456 888999999964 67777888774 56 8999999998888776431 112222211111
Q ss_pred C-CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 101 P-FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 101 ~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
. .....+|+|+-+... ...++...+.|+++|+++.....
T Consensus 230 ~~~~g~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~g~~ 269 (348)
T 2d8a_A 230 DITDGNGVDVFLEFSGA------PKALEQGLQAVTPAGRVSLLGLY 269 (348)
T ss_dssp HHTTTSCEEEEEECSCC------HHHHHHHHHHEEEEEEEEECCCC
T ss_pred HHcCCCCCCEEEECCCC------HHHHHHHHHHHhcCCEEEEEccC
Confidence 0 122359999865431 34677788899999998876543
No 346
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.83 E-value=0.032 Score=42.92 Aligned_cols=98 Identities=17% Similarity=0.197 Sum_probs=65.0
Q ss_pred HhhCCCCCCeEEEecC-C-CChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC----
Q 027517 28 SWSGAKTGDNVLDVCC-G-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---- 101 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---- 101 (222)
......++.+||-.|+ | .|..+..+++.. +.++++++.+++.++.+++.- .-.++..+ .++.
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~g---------a~~v~~~~-~~~~~~v~ 220 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGM--GAKVIAVVNRTAATEFVKSVG---------ADIVLPLE-EGWAKAVR 220 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHT---------CSEEEESS-TTHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhcC---------CcEEecCc-hhHHHHHH
Confidence 4456678999999997 3 477888888875 569999999998888777641 11223222 2211
Q ss_pred --CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 102 --FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 102 --~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
.....+|+|+-+..-. .+....+.|+++|++++...
T Consensus 221 ~~~~~~g~Dvvid~~g~~-------~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 221 EATGGAGVDMVVDPIGGP-------AFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp HHTTTSCEEEEEESCC---------CHHHHHHTEEEEEEEEEC--
T ss_pred HHhCCCCceEEEECCchh-------HHHHHHHhhcCCCEEEEEEc
Confidence 1233699999755421 46677889999999987643
No 347
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.80 E-value=0.061 Score=41.90 Aligned_cols=100 Identities=11% Similarity=0.113 Sum_probs=65.8
Q ss_pred HhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCC-cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCC--CCc---
Q 027517 28 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA--LDL--- 100 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~--~~~--- 100 (222)
......++.+||-+|+|. |..+..+++.. +. +|+++|.+++.++.+++.- .-.++..+- .++
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~lG---------a~~vi~~~~~~~~~~~~ 257 (376)
T 1e3i_A 189 NTAKVTPGSTCAVFGLGCVGLSAIIGCKIA--GASRIIAIDINGEKFPKAKALG---------ATDCLNPRELDKPVQDV 257 (376)
T ss_dssp TTSCCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTT---------CSEEECGGGCSSCHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHHhC---------CcEEEccccccchHHHH
Confidence 344667889999999875 77778888875 55 7999999999888876542 111221110 111
Q ss_pred --CCCCCceeEEEEcccccCcccHHHHHHHHhcccCCC-cEEEEEec
Q 027517 101 --PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPG-SRISVLDF 144 (222)
Q Consensus 101 --~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~g-G~l~i~~~ 144 (222)
....+.+|+|+-+-.- ...++...+.|+++ |++++...
T Consensus 258 v~~~~~~g~Dvvid~~G~------~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 258 ITELTAGGVDYSLDCAGT------AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp HHHHHTSCBSEEEESSCC------HHHHHHHHHTBCTTTCEEEECCC
T ss_pred HHHHhCCCccEEEECCCC------HHHHHHHHHHhhcCCCEEEEECC
Confidence 0111368999854321 34677888999999 99887654
No 348
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=95.67 E-value=0.094 Score=40.65 Aligned_cols=98 Identities=19% Similarity=0.199 Sum_probs=65.1
Q ss_pred hhCCCCCCeEEEec--CCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-----C
Q 027517 29 WSGAKTGDNVLDVC--CGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-----P 101 (222)
Q Consensus 29 ~~~~~~~~~vLdiG--~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-----~ 101 (222)
.....++.+||-.| .|.|..+..+++.. +.+|++++.+++.++.+++.- .-.++..+-.++ .
T Consensus 158 ~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~G---------a~~~~~~~~~~~~~~~~~ 226 (362)
T 2c0c_A 158 LGGLSEGKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTCSSDEKSAFLKSLG---------CDRPINYKTEPVGTVLKQ 226 (362)
T ss_dssp HTCCCTTCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTT---------CSEEEETTTSCHHHHHHH
T ss_pred hcCCCCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHcC---------CcEEEecCChhHHHHHHH
Confidence 34667889999999 34578888888874 568999999988887776531 112222211111 0
Q ss_pred CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 102 FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 102 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
...+.+|+|+-+..- ..++...+.|+++|+++....
T Consensus 227 ~~~~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 227 EYPEGVDVVYESVGG-------AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp HCTTCEEEEEECSCT-------HHHHHHHHHEEEEEEEEECCC
T ss_pred hcCCCCCEEEECCCH-------HHHHHHHHHHhcCCEEEEEeC
Confidence 112469999875541 367778889999999887643
No 349
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.65 E-value=0.026 Score=43.45 Aligned_cols=97 Identities=11% Similarity=-0.017 Sum_probs=64.3
Q ss_pred CCCCCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeC----CC-CCcCCCC
Q 027517 31 GAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEG----DA-LDLPFSD 104 (222)
Q Consensus 31 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----d~-~~~~~~~ 104 (222)
.. ++.+||-+|+|. |..+..+++...++.+|+++|.+++.++.+++.- .-.++.. |. ..+. ..
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lG---------a~~vi~~~~~~~~~~~~~-~g 236 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELG---------ADYVSEMKDAESLINKLT-DG 236 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHT---------CSEEECHHHHHHHHHHHH-TT
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhC---------CCEEeccccchHHHHHhh-cC
Confidence 56 889999999975 6777888887522468999999998888876531 1111111 10 1111 12
Q ss_pred CceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 105 CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 105 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
..+|+|+-...- ...++...+.|+++|+++....
T Consensus 237 ~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 237 LGASIAIDLVGT------EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp CCEEEEEESSCC------HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCccEEEECCCC------hHHHHHHHHHhhcCCEEEEeCC
Confidence 369999865432 3467788889999999887544
No 350
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.65 E-value=0.035 Score=42.31 Aligned_cols=53 Identities=19% Similarity=0.142 Sum_probs=42.6
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCCh---hHHHHHhcchh
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSK---NQLSMASSRQD 80 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~---~~~~~~~~~~~ 80 (222)
+.++... ..++..|||.-||+|..+....+. +.+++|+|+++ ...+.+++++.
T Consensus 233 ~~~i~~~-~~~~~~vlDpF~GsGtt~~aa~~~---~r~~ig~e~~~~~~~~~~~~~~Rl~ 288 (319)
T 1eg2_A 233 ERLVRAL-SHPGSTVLDFFAGSGVTARVAIQE---GRNSICTDAAPVFKEYYQKQLTFLQ 288 (319)
T ss_dssp HHHHHHH-SCTTCEEEETTCTTCHHHHHHHHH---TCEEEEEESSTHHHHHHHHHHHHC-
T ss_pred HHHHHHh-CCCCCEEEecCCCCCHHHHHHHHc---CCcEEEEECCccHHHHHHHHHHHHH
Confidence 3444444 367889999999999999887766 56899999999 99999998874
No 351
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.64 E-value=0.044 Score=42.42 Aligned_cols=99 Identities=18% Similarity=0.179 Sum_probs=63.5
Q ss_pred hCCCCCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCC-Cc--CCCCC
Q 027517 30 SGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL-DL--PFSDC 105 (222)
Q Consensus 30 ~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~-~~--~~~~~ 105 (222)
.+..++.+||-+|+|. |..+..+++.. +.+|+++|.+++.++.+++.- .-.++..+-. +. ... +
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~--Ga~Vi~~~~~~~~~~~~~~lG---------a~~v~~~~~~~~~~~~~~-~ 242 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAM--GAETYVISRSSRKREDAMKMG---------ADHYIATLEEGDWGEKYF-D 242 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHHHT---------CSEEEEGGGTSCHHHHSC-S
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHcC---------CCEEEcCcCchHHHHHhh-c
Confidence 4667899999999865 77778888875 558999999998888876531 1122221111 11 011 4
Q ss_pred ceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 106 FFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 106 ~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
.+|+|+-...-.. ...++...+.|+++|+++....
T Consensus 243 ~~D~vid~~g~~~----~~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 243 TFDLIVVCASSLT----DIDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp CEEEEEECCSCST----TCCTTTGGGGEEEEEEEEECCC
T ss_pred CCCEEEECCCCCc----HHHHHHHHHHhcCCCEEEEecC
Confidence 6999986554300 1123457788999999877543
No 352
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.63 E-value=0.14 Score=39.71 Aligned_cols=93 Identities=13% Similarity=0.108 Sum_probs=62.0
Q ss_pred CCCeEEEec-CCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCC--CCC-c-CCCCCce
Q 027517 34 TGDNVLDVC-CGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGD--ALD-L-PFSDCFF 107 (222)
Q Consensus 34 ~~~~vLdiG-~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d--~~~-~-~~~~~~~ 107 (222)
++.+||-.| +|. |..+..+++.+ .+.+|+++|.+++.++.+++.- .-.++... ..+ + ....+.+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~-~g~~Vi~~~~~~~~~~~~~~lG---------ad~vi~~~~~~~~~v~~~~~~g~ 240 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQR-TDLTVIATASRPETQEWVKSLG---------AHHVIDHSKPLAAEVAALGLGAP 240 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHH-CCSEEEEECSSHHHHHHHHHTT---------CSEEECTTSCHHHHHHTTCSCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHcC---------CCEEEeCCCCHHHHHHHhcCCCc
Confidence 678999998 554 77888888864 3569999999998888876542 11222111 110 0 1223469
Q ss_pred eEEEEcccccCcccHHHHHHHHhcccCCCcEEEEE
Q 027517 108 DAITMGYGLRNVVDKRKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 108 D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~ 142 (222)
|+|+-+.. -...++...+.|+++|+++..
T Consensus 241 Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 241 AFVFSTTH------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEEECSC------HHHHHHHHHHHSCTTCEEEEC
T ss_pred eEEEECCC------chhhHHHHHHHhcCCCEEEEE
Confidence 99886432 235678888999999999876
No 353
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.62 E-value=0.023 Score=43.65 Aligned_cols=75 Identities=16% Similarity=0.189 Sum_probs=55.3
Q ss_pred CeEEEecCCCChhHHHHHHHhCCC-CcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC---CCCceeEEE
Q 027517 36 DNVLDVCCGSGDLSFLLSEQVGSQ-GKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF---SDCFFDAIT 111 (222)
Q Consensus 36 ~~vLdiG~G~G~~~~~l~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~D~v~ 111 (222)
.+++|+-||.|..+.-+.+. +-. ..+.++|+++.+.+.-+.+. +...++..|+.++.. +...+|+++
T Consensus 4 ~~~idLFaG~GG~~~G~~~a-G~~~~~v~a~e~d~~a~~ty~~N~--------~~~~~~~~DI~~~~~~~~~~~~~D~l~ 74 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKES-GLDGEIVAAVDINTVANSVYKHNF--------PETNLLNRNIQQLTPQVIKKWNVDTIL 74 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHC--------TTSCEECCCGGGCCHHHHHHTTCCEEE
T ss_pred CEEEEECcCccHHHHHHHHc-CCCceEEEEEeCCHHHHHHHHHhC--------CCCceeccccccCCHHHhccCCCCEEE
Confidence 47999999999999988876 322 24789999999988877765 345567788877532 223589999
Q ss_pred EcccccCc
Q 027517 112 MGYGLRNV 119 (222)
Q Consensus 112 ~~~~l~~~ 119 (222)
.......+
T Consensus 75 ggpPCQ~f 82 (333)
T 4h0n_A 75 MSPPCQPF 82 (333)
T ss_dssp ECCCCCCS
T ss_pred ecCCCcch
Confidence 87766555
No 354
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.60 E-value=0.048 Score=41.04 Aligned_cols=76 Identities=17% Similarity=0.161 Sum_probs=53.3
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCc-EEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC---C-CCce
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGK-VIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF---S-DCFF 107 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---~-~~~~ 107 (222)
....+++|+-||.|.++.-+.+. +-... +.++|+++.+.+.-+.+. +...+...|+.++.. + .+.+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~--------~~~~~~~~DI~~i~~~~i~~~~~~ 84 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRH--------QGKIMYVGDVRSVTQKHIQEWGPF 84 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHT--------TTCEEEECCGGGCCHHHHHHTCCC
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhC--------CCCceeCCChHHccHHHhcccCCc
Confidence 44569999999999999888765 22222 589999999887766554 345677888887631 1 1358
Q ss_pred eEEEEccccc
Q 027517 108 DAITMGYGLR 117 (222)
Q Consensus 108 D~v~~~~~l~ 117 (222)
|+++......
T Consensus 85 Dll~ggpPCQ 94 (295)
T 2qrv_A 85 DLVIGGSPCN 94 (295)
T ss_dssp SEEEECCCCG
T ss_pred CEEEecCCCc
Confidence 9999755433
No 355
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.58 E-value=0.046 Score=41.84 Aligned_cols=98 Identities=19% Similarity=0.130 Sum_probs=64.6
Q ss_pred hCCCCCCeEEEecC-C-CChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC------
Q 027517 30 SGAKTGDNVLDVCC-G-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP------ 101 (222)
Q Consensus 30 ~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------ 101 (222)
....++.+||-.|+ | .|..+..+++.. +.++++++.+++.++.+++.- .-.++..+-.+..
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~g---------a~~~~~~~~~~~~~~~~~~ 212 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMK--GAHTIAVASTDEKLKIAKEYG---------AEYLINASKEDILRQVLKF 212 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTT---------CSEEEETTTSCHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcC---------CcEEEeCCCchHHHHHHHH
Confidence 36678999999994 3 477777888774 569999999998888776541 1122222212210
Q ss_pred CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 102 FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 102 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
.....+|+|+-+..- ..++...+.|+++|+++.....
T Consensus 213 ~~~~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G~~ 249 (334)
T 3qwb_A 213 TNGKGVDASFDSVGK-------DTFEISLAALKRKGVFVSFGNA 249 (334)
T ss_dssp TTTSCEEEEEECCGG-------GGHHHHHHHEEEEEEEEECCCT
T ss_pred hCCCCceEEEECCCh-------HHHHHHHHHhccCCEEEEEcCC
Confidence 123469999875542 2466677889999999876443
No 356
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.57 E-value=0.067 Score=41.07 Aligned_cols=100 Identities=19% Similarity=0.170 Sum_probs=64.9
Q ss_pred HhhCCCCCCeEEEecC--CCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEe-CCCCCcC---
Q 027517 28 SWSGAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVE-GDALDLP--- 101 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~d~~~~~--- 101 (222)
+.....++.+||-.|+ |.|..+..+++.. +.++++++.+++.++.+++.+. .-..+. .+..++.
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~~~g--------~~~~~d~~~~~~~~~~~ 218 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMM--GCYVVGSAGSKEKVDLLKTKFG--------FDDAFNYKEESDLTAAL 218 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTSC--------CSEEEETTSCSCSHHHH
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcC--------CceEEecCCHHHHHHHH
Confidence 3446678899999997 3477777777764 5689999999988887763321 111221 1111110
Q ss_pred --CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 102 --FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 102 --~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
...+.+|+|+.+.. ...++...+.|+++|++++...
T Consensus 219 ~~~~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 219 KRCFPNGIDIYFENVG-------GKMLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp HHHCTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECCC
T ss_pred HHHhCCCCcEEEECCC-------HHHHHHHHHHHhcCCEEEEEcc
Confidence 11246999987553 1367888899999999987543
No 357
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.52 E-value=0.07 Score=40.92 Aligned_cols=97 Identities=16% Similarity=0.189 Sum_probs=64.2
Q ss_pred hCCCCCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-----CC
Q 027517 30 SGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----FS 103 (222)
Q Consensus 30 ~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~ 103 (222)
....++.+||-+|+|. |..+..+++.. +.+++++|.+++.++.+++.- .-.++...-.++. ..
T Consensus 160 ~~~~~g~~VlV~GaG~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~lG---------a~~~~d~~~~~~~~~~~~~~ 228 (339)
T 1rjw_A 160 TGAKPGEWVAIYGIGGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAKELG---------ADLVVNPLKEDAAKFMKEKV 228 (339)
T ss_dssp HTCCTTCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTT---------CSEEECTTTSCHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHCC---------CCEEecCCCccHHHHHHHHh
Confidence 4677889999999864 67777778774 569999999998888776431 1112211101110 01
Q ss_pred CCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 104 DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
+.+|+|+-+... ...++...+.|+++|+++....
T Consensus 229 -~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 229 -GGVHAAVVTAVS------KPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp -SSEEEEEESSCC------HHHHHHHHHHEEEEEEEEECCC
T ss_pred -CCCCEEEECCCC------HHHHHHHHHHhhcCCEEEEecc
Confidence 358999865431 3467788889999999887544
No 358
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=95.49 E-value=0.062 Score=41.36 Aligned_cols=101 Identities=16% Similarity=0.165 Sum_probs=64.9
Q ss_pred hhCCCCCCeEEEecCC--CChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-----C
Q 027517 29 WSGAKTGDNVLDVCCG--SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-----P 101 (222)
Q Consensus 29 ~~~~~~~~~vLdiG~G--~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-----~ 101 (222)
..+..++.+||-.|+| .|..+..+++.. .+.+|+++|.+++.++.+++. + ....+...+ .+. .
T Consensus 165 ~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~-~Ga~Vi~~~~~~~~~~~~~~~----g----~~~~~~~~~-~~~~~~~~~ 234 (347)
T 1jvb_A 165 KASLDPTKTLLVVGAGGGLGTMAVQIAKAV-SGATIIGVDVREEAVEAAKRA----G----ADYVINASM-QDPLAEIRR 234 (347)
T ss_dssp HTTCCTTCEEEEETTTSHHHHHHHHHHHHH-TCCEEEEEESSHHHHHHHHHH----T----CSEEEETTT-SCHHHHHHH
T ss_pred hcCCCCCCEEEEECCCccHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHh----C----CCEEecCCC-ccHHHHHHH
Confidence 3566788999999988 356666777664 146899999999888777543 1 111111112 111 1
Q ss_pred CCC-CceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 102 FSD-CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 102 ~~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
... +.+|+|+.+..- ...++...+.|+++|+++.....
T Consensus 235 ~~~~~~~d~vi~~~g~------~~~~~~~~~~l~~~G~iv~~g~~ 273 (347)
T 1jvb_A 235 ITESKGVDAVIDLNNS------EKTLSVYPKALAKQGKYVMVGLF 273 (347)
T ss_dssp HTTTSCEEEEEESCCC------HHHHTTGGGGEEEEEEEEECCSS
T ss_pred HhcCCCceEEEECCCC------HHHHHHHHHHHhcCCEEEEECCC
Confidence 111 469999865432 34677888999999998876443
No 359
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.47 E-value=0.16 Score=38.90 Aligned_cols=102 Identities=20% Similarity=0.234 Sum_probs=64.3
Q ss_pred HHhhCCCCCCeEEEecCCCC-hhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-----
Q 027517 27 VSWSGAKTGDNVLDVCCGSG-DLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL----- 100 (222)
Q Consensus 27 ~~~~~~~~~~~vLdiG~G~G-~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~----- 100 (222)
+......++.+||=+|+|.+ ..+..+++.. .+.+|+++|.+++-++.+++.-. -.++...-.+.
T Consensus 156 l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~-~g~~Vi~~~~~~~r~~~~~~~Ga---------~~~i~~~~~~~~~~v~ 225 (348)
T 4eez_A 156 IKVSGVKPGDWQVIFGAGGLGNLAIQYAKNV-FGAKVIAVDINQDKLNLAKKIGA---------DVTINSGDVNPVDEIK 225 (348)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHT-SCCEEEEEESCHHHHHHHHHTTC---------SEEEEC-CCCHHHHHH
T ss_pred ecccCCCCCCEEEEEcCCCccHHHHHHHHHh-CCCEEEEEECcHHHhhhhhhcCC---------eEEEeCCCCCHHHHhh
Confidence 34456788999999999874 4455556553 35699999999988877776531 12222111111
Q ss_pred C-CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 101 P-FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 101 ~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
. .....+|.++.... -...+....+.++++|++++...
T Consensus 226 ~~t~g~g~d~~~~~~~------~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 226 KITGGLGVQSAIVCAV------ARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp HHTTSSCEEEEEECCS------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred hhcCCCCceEEEEecc------CcchhheeheeecCCceEEEEec
Confidence 0 12234666665332 14567788889999999887644
No 360
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.46 E-value=0.063 Score=41.31 Aligned_cols=99 Identities=15% Similarity=0.163 Sum_probs=64.2
Q ss_pred hCCCCCCeEEEecC--CCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEe-CCCCCcC-----
Q 027517 30 SGAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVE-GDALDLP----- 101 (222)
Q Consensus 30 ~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~d~~~~~----- 101 (222)
....++.+||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++. + .. ..+. .+..++.
T Consensus 165 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~~~~----g----~~-~~~d~~~~~~~~~~~~~ 233 (347)
T 2hcy_A 165 ANLMAGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELFRSI----G----GE-VFIDFTKEKDIVGAVLK 233 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHHHHT----T----CC-EEEETTTCSCHHHHHHH
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHHHHc----C----Cc-eEEecCccHhHHHHHHH
Confidence 36678899999998 3467777777764 56999999988877766543 1 11 1221 1111110
Q ss_pred CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 102 FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 102 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
...+.+|+|+.+... ...++...+.|+++|+++.....
T Consensus 234 ~~~~~~D~vi~~~g~------~~~~~~~~~~l~~~G~iv~~g~~ 271 (347)
T 2hcy_A 234 ATDGGAHGVINVSVS------EAAIEASTRYVRANGTTVLVGMP 271 (347)
T ss_dssp HHTSCEEEEEECSSC------HHHHHHHTTSEEEEEEEEECCCC
T ss_pred HhCCCCCEEEECCCc------HHHHHHHHHHHhcCCEEEEEeCC
Confidence 011258999875542 35678889999999998876443
No 361
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.45 E-value=0.18 Score=33.15 Aligned_cols=92 Identities=16% Similarity=0.066 Sum_probs=55.9
Q ss_pred CCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC----CCCCceeE
Q 027517 35 GDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----FSDCFFDA 109 (222)
Q Consensus 35 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D~ 109 (222)
..+|+=+|+|. |......+.. .+.+|+++|.+++.++.+++. .+.++.+|..+.. ..-..+|+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~--~g~~v~vid~~~~~~~~~~~~----------g~~~i~gd~~~~~~l~~a~i~~ad~ 74 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA--SDIPLVVIETSRTRVDELRER----------GVRAVLGNAANEEIMQLAHLECAKW 74 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH--TTCCEEEEESCHHHHHHHHHT----------TCEEEESCTTSHHHHHHTTGGGCSE
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCHHHHHHHHHc----------CCCEEECCCCCHHHHHhcCcccCCE
Confidence 35799999875 4444333333 356899999999888776642 5677888887632 12246888
Q ss_pred EEEcccccCcccHHHHHHHHhcccCCCcEEEE
Q 027517 110 ITMGYGLRNVVDKRKALEESFRVLKPGSRISV 141 (222)
Q Consensus 110 v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i 141 (222)
|++...-. .....+....+.+.|+..++.
T Consensus 75 vi~~~~~~---~~n~~~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 75 LILTIPNG---YEAGEIVASARAKNPDIEIIA 103 (140)
T ss_dssp EEECCSCH---HHHHHHHHHHHHHCSSSEEEE
T ss_pred EEEECCCh---HHHHHHHHHHHHHCCCCeEEE
Confidence 88743211 112223334455667776654
No 362
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.44 E-value=0.075 Score=40.82 Aligned_cols=99 Identities=18% Similarity=0.225 Sum_probs=67.5
Q ss_pred CCCCCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC------CC
Q 027517 31 GAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP------FS 103 (222)
Q Consensus 31 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~~ 103 (222)
...++.+||-+|+|. |..+..+++.. .+.+|+++|.+++-++.+++.- .-.++..+- +.. ..
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~-g~~~Vi~~~~~~~~~~~~~~lG---------a~~~i~~~~-~~~~~v~~~t~ 236 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAV-SAARVIAVDLDDDRLALAREVG---------ADAAVKSGA-GAADAIRELTG 236 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHH-CCCEEEEEESCHHHHHHHHHTT---------CSEEEECST-THHHHHHHHHG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcC---------CCEEEcCCC-cHHHHHHHHhC
Confidence 567889999999976 77788888875 2468999999999888887652 112222211 110 11
Q ss_pred CCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecCC
Q 027517 104 DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 146 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~~ 146 (222)
...+|+|+-.-.- ...++...+.|+++|++++.....
T Consensus 237 g~g~d~v~d~~G~------~~~~~~~~~~l~~~G~iv~~G~~~ 273 (345)
T 3jv7_A 237 GQGATAVFDFVGA------QSTIDTAQQVVAVDGHISVVGIHA 273 (345)
T ss_dssp GGCEEEEEESSCC------HHHHHHHHHHEEEEEEEEECSCCT
T ss_pred CCCCeEEEECCCC------HHHHHHHHHHHhcCCEEEEECCCC
Confidence 2368999864321 346788889999999998765443
No 363
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.44 E-value=0.036 Score=43.32 Aligned_cols=100 Identities=20% Similarity=0.131 Sum_probs=65.7
Q ss_pred hhC-CCCCCeEEEecCCC-ChhHHHHHHHhCCC-CcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCC---CCC---
Q 027517 29 WSG-AKTGDNVLDVCCGS-GDLSFLLSEQVGSQ-GKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGD---ALD--- 99 (222)
Q Consensus 29 ~~~-~~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d---~~~--- 99 (222)
..+ ..++.+||-+|+|. |..+..+++.. + .+|++++.+++.++.+++.- .-.++..+ -.+
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~~~~lG---------a~~vi~~~~~~~~~~~~ 257 (380)
T 1vj0_A 189 EYPESFAGKTVVIQGAGPLGLFGVVIARSL--GAENVIVIAGSPNRLKLAEEIG---------ADLTLNRRETSVEERRK 257 (380)
T ss_dssp TCSSCCBTCEEEEECCSHHHHHHHHHHHHT--TBSEEEEEESCHHHHHHHHHTT---------CSEEEETTTSCHHHHHH
T ss_pred hcCCCCCCCEEEEECcCHHHHHHHHHHHHc--CCceEEEEcCCHHHHHHHHHcC---------CcEEEeccccCcchHHH
Confidence 345 67889999999775 77778888875 5 48999999999888877531 11222222 111
Q ss_pred -c-C-CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 100 -L-P-FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 100 -~-~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
+ . .....+|+|+-+..- ...++...+.|+++|+++.....
T Consensus 258 ~v~~~~~g~g~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~G~~ 300 (380)
T 1vj0_A 258 AIMDITHGRGADFILEATGD------SRALLEGSELLRRGGFYSVAGVA 300 (380)
T ss_dssp HHHHHTTTSCEEEEEECSSC------TTHHHHHHHHEEEEEEEEECCCC
T ss_pred HHHHHhCCCCCcEEEECCCC------HHHHHHHHHHHhcCCEEEEEecC
Confidence 1 0 122369999865431 23466778889999998876543
No 364
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=95.38 E-value=0.13 Score=39.14 Aligned_cols=96 Identities=24% Similarity=0.188 Sum_probs=60.8
Q ss_pred HhhCCCCCCeEEEec-CCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC-cCCCC
Q 027517 28 SWSGAKTGDNVLDVC-CGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD-LPFSD 104 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG-~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~~~ 104 (222)
...+..++.+||-+| +|. |..+..+++.. +.++++++ +++..+.+++. + .-.++..+-.+ +...-
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~--Ga~vi~~~-~~~~~~~~~~l----G-----a~~~i~~~~~~~~~~~~ 213 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQK--GTTVITTA-SKRNHAFLKAL----G-----AEQCINYHEEDFLLAIS 213 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE-CHHHHHHHHHH----T-----CSEEEETTTSCHHHHCC
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHc--CCEEEEEe-ccchHHHHHHc----C-----CCEEEeCCCcchhhhhc
Confidence 556778899999997 554 78888888875 56888887 45446655543 1 11223222122 11111
Q ss_pred CceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEE
Q 027517 105 CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 105 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~ 142 (222)
+.+|+|+-+-. ...+....+.|+++|+++..
T Consensus 214 ~g~D~v~d~~g-------~~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 214 TPVDAVIDLVG-------GDVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp SCEEEEEESSC-------HHHHHHHGGGEEEEEEEEEC
T ss_pred cCCCEEEECCC-------cHHHHHHHHhccCCCEEEEe
Confidence 45899886433 12237788999999999865
No 365
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=95.34 E-value=0.11 Score=39.81 Aligned_cols=96 Identities=21% Similarity=0.227 Sum_probs=62.9
Q ss_pred CCCCCCeEEEecC--CCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-----C-C
Q 027517 31 GAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-----P-F 102 (222)
Q Consensus 31 ~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-----~-~ 102 (222)
...++.+||-.|+ |.|..+..+++.. +.++++++.+++.++.+++. + .. .++...-.+. . .
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~~----g----a~-~~~d~~~~~~~~~~~~~~ 231 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSEDKLRRAKAL----G----AD-ETVNYTHPDWPKEVRRLT 231 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHH----T----CS-EEEETTSTTHHHHHHHHT
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhc----C----CC-EEEcCCcccHHHHHHHHh
Confidence 5678899999998 4577788888774 56999999999888877642 1 11 1221111111 0 1
Q ss_pred CCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 103 SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
....+|+|+-+.. . ..++...+.|+++|+++....
T Consensus 232 ~~~~~d~vi~~~g-~------~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 232 GGKGADKVVDHTG-A------LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp TTTCEEEEEESSC-S------SSHHHHHHHEEEEEEEEESSC
T ss_pred CCCCceEEEECCC-H------HHHHHHHHhhccCCEEEEEec
Confidence 2246999997665 2 135667788899999877544
No 366
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=95.25 E-value=0.083 Score=40.78 Aligned_cols=97 Identities=16% Similarity=0.173 Sum_probs=62.7
Q ss_pred hhCCCCCCeEEEecC--CCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc----C-
Q 027517 29 WSGAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL----P- 101 (222)
Q Consensus 29 ~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~----~- 101 (222)
..+..++.+||-.|+ |.|..+..+++.. +.++++++.+++.++.+++.- .-..+..+-.+. .
T Consensus 165 ~~~~~~g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~g---------a~~~~d~~~~~~~~~~~~ 233 (351)
T 1yb5_A 165 SACVKAGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVLQNG---------AHEVFNHREVNYIDKIKK 233 (351)
T ss_dssp TSCCCTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTT---------CSEEEETTSTTHHHHHHH
T ss_pred hhCCCCcCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHcC---------CCEEEeCCCchHHHHHHH
Confidence 345678899999997 3467777777764 568999999998877665431 111222111111 0
Q ss_pred -CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEe
Q 027517 102 -FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 102 -~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
.....+|+|+.+..- ..+....+.++++|+++...
T Consensus 234 ~~~~~~~D~vi~~~G~-------~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 234 YVGEKGIDIIIEMLAN-------VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HHCTTCEEEEEESCHH-------HHHHHHHHHEEEEEEEEECC
T ss_pred HcCCCCcEEEEECCCh-------HHHHHHHHhccCCCEEEEEe
Confidence 122369999875531 24667788999999988764
No 367
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=95.22 E-value=0.054 Score=41.91 Aligned_cols=99 Identities=17% Similarity=0.177 Sum_probs=62.1
Q ss_pred hCCC-CCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeC-CCCCcCCCCCc
Q 027517 30 SGAK-TGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEG-DALDLPFSDCF 106 (222)
Q Consensus 30 ~~~~-~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~ 106 (222)
.... ++.+||-+|+|. |..+..+++.. +.++++++.+++.++.+++.+.. . .++.. +........+.
T Consensus 175 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~~~~~~~~~~~~~lGa------~--~vi~~~~~~~~~~~~~g 244 (357)
T 2cf5_A 175 FGLKQPGLRGGILGLGGVGHMGVKIAKAM--GHHVTVISSSNKKREEALQDLGA------D--DYVIGSDQAKMSELADS 244 (357)
T ss_dssp TSTTSTTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSTTHHHHHHTTSCC------S--CEEETTCHHHHHHSTTT
T ss_pred cCCCCCCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHcCC------c--eeeccccHHHHHHhcCC
Confidence 4556 889999999875 67777888876 46899999999888777633311 1 11211 11111101135
Q ss_pred eeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 107 FDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 107 ~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
+|+|+-...-. ..++...+.++++|+++....
T Consensus 245 ~D~vid~~g~~------~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 245 LDYVIDTVPVH------HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp EEEEEECCCSC------CCSHHHHTTEEEEEEEEECSC
T ss_pred CCEEEECCCCh------HHHHHHHHHhccCCEEEEeCC
Confidence 99998654321 123456778999999887644
No 368
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.18 E-value=0.067 Score=41.37 Aligned_cols=98 Identities=16% Similarity=0.166 Sum_probs=62.1
Q ss_pred hhCCCCC------CeEEEecCCC-ChhH-HHHH-HHhCCCCc-EEEEeCChh---HHHHHhcchhhhhhhcCCCeeEEeC
Q 027517 29 WSGAKTG------DNVLDVCCGS-GDLS-FLLS-EQVGSQGK-VIGLDFSKN---QLSMASSRQDLVSKACYKNIEWVEG 95 (222)
Q Consensus 29 ~~~~~~~------~~vLdiG~G~-G~~~-~~l~-~~~~~~~~-~~~~D~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~ 95 (222)
..+..++ .+||-+|+|. |..+ ..++ +.. +.+ |+++|.+++ .++.+++.- ......
T Consensus 161 ~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~--Ga~~Vi~~~~~~~~~~~~~~~~~lG----------a~~v~~ 228 (357)
T 2b5w_A 161 HAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDK--GYENLYCLGRRDRPDPTIDIIEELD----------ATYVDS 228 (357)
T ss_dssp HHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTT--CCCEEEEEECCCSSCHHHHHHHHTT----------CEEEET
T ss_pred hcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHc--CCcEEEEEeCCcccHHHHHHHHHcC----------CcccCC
Confidence 3445677 8999999864 6666 7777 654 556 999999888 777776531 111111
Q ss_pred CCCCcC----CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 96 DALDLP----FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 96 d~~~~~----~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
+-.++. . .+.+|+|+-...- ...++...+.|+++|+++.....
T Consensus 229 ~~~~~~~i~~~-~gg~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~g~~ 275 (357)
T 2b5w_A 229 RQTPVEDVPDV-YEQMDFIYEATGF------PKHAIQSVQALAPNGVGALLGVP 275 (357)
T ss_dssp TTSCGGGHHHH-SCCEEEEEECSCC------HHHHHHHHHHEEEEEEEEECCCC
T ss_pred CccCHHHHHHh-CCCCCEEEECCCC------hHHHHHHHHHHhcCCEEEEEeCC
Confidence 111110 1 1268999854321 34577888899999998876543
No 369
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=95.16 E-value=0.086 Score=40.67 Aligned_cols=100 Identities=16% Similarity=0.113 Sum_probs=65.1
Q ss_pred HhhCCCCCCeEEEecC-C-CChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC----
Q 027517 28 SWSGAKTGDNVLDVCC-G-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---- 101 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---- 101 (222)
......++.+||-.|+ | .|..+..+++.. +.+|+++|.+++.++.+++.- .-..+..+-.++.
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~lG---------a~~~~~~~~~~~~~~~~ 229 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAF--GAEVYATAGSTGKCEACERLG---------AKRGINYRSEDFAAVIK 229 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHT---------CSEEEETTTSCHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhcC---------CCEEEeCCchHHHHHHH
Confidence 3456678999999953 3 377777888774 568999999999888877531 1122222211110
Q ss_pred -CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 102 -FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 102 -~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
...+.+|+|+-+..-. .+....+.|+++|+++.....
T Consensus 230 ~~~~~g~Dvvid~~g~~-------~~~~~~~~l~~~G~iv~~g~~ 267 (353)
T 4dup_A 230 AETGQGVDIILDMIGAA-------YFERNIASLAKDGCLSIIAFL 267 (353)
T ss_dssp HHHSSCEEEEEESCCGG-------GHHHHHHTEEEEEEEEECCCT
T ss_pred HHhCCCceEEEECCCHH-------HHHHHHHHhccCCEEEEEEec
Confidence 0134699998755421 456677899999998876543
No 370
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.11 E-value=0.078 Score=40.37 Aligned_cols=99 Identities=15% Similarity=0.102 Sum_probs=63.4
Q ss_pred hhCCCCCCeEEEecC--CCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-----C
Q 027517 29 WSGAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-----P 101 (222)
Q Consensus 29 ~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-----~ 101 (222)
..+..++.+||-.|+ |.|..+..+++.. +.+++++|.+++.++.+++. + .. ..+..+-.+. .
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~~----g----~~-~~~~~~~~~~~~~~~~ 203 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSALKA----G----AW-QVINYREEDLVERLKE 203 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHH----T----CS-EEEETTTSCHHHHHHH
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHc----C----CC-EEEECCCccHHHHHHH
Confidence 345678899999994 3467777777764 56899999998887777652 1 11 1221111111 0
Q ss_pred -CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 102 -FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 102 -~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
.....+|+++.+.. ...++...+.|+++|+++.....
T Consensus 204 ~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g~~ 241 (327)
T 1qor_A 204 ITGGKKVRVVYDSVG-------RDTWERSLDCLQRRGLMVSFGNS 241 (327)
T ss_dssp HTTTCCEEEEEECSC-------GGGHHHHHHTEEEEEEEEECCCT
T ss_pred HhCCCCceEEEECCc-------hHHHHHHHHHhcCCCEEEEEecC
Confidence 11236999987654 13467778899999998876543
No 371
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=94.88 E-value=0.053 Score=42.12 Aligned_cols=99 Identities=16% Similarity=0.166 Sum_probs=61.0
Q ss_pred hCCC-CCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeC-CCCCcCCCCCc
Q 027517 30 SGAK-TGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEG-DALDLPFSDCF 106 (222)
Q Consensus 30 ~~~~-~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~ 106 (222)
.... ++.+||-+|+|. |..+..+++.. +.+|++++.+++.++.+++.+. .-.++.. +...+....+.
T Consensus 182 ~~~~~~g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~lG--------a~~v~~~~~~~~~~~~~~~ 251 (366)
T 1yqd_A 182 FGLDEPGKHIGIVGLGGLGHVAVKFAKAF--GSKVTVISTSPSKKEEALKNFG--------ADSFLVSRDQEQMQAAAGT 251 (366)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGHHHHHHTSC--------CSEEEETTCHHHHHHTTTC
T ss_pred cCcCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcC--------CceEEeccCHHHHHHhhCC
Confidence 4556 888999999865 66777778775 5689999999988877663331 1112211 11111101136
Q ss_pred eeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 107 FDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 107 ~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
+|+|+-+..... .++...+.|+++|+++....
T Consensus 252 ~D~vid~~g~~~------~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 252 LDGIIDTVSAVH------PLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp EEEEEECCSSCC------CSHHHHHHEEEEEEEEECCC
T ss_pred CCEEEECCCcHH------HHHHHHHHHhcCCEEEEEcc
Confidence 999986544321 13345667899999877544
No 372
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=94.81 E-value=0.17 Score=40.49 Aligned_cols=97 Identities=20% Similarity=0.165 Sum_probs=63.9
Q ss_pred hCCCCCCeEEEecC-C-CChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-------
Q 027517 30 SGAKTGDNVLDVCC-G-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL------- 100 (222)
Q Consensus 30 ~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~------- 100 (222)
....++.+||-+|+ | .|..+..+++.. +.++++++.+++-++.+++.- .-.++...-.+.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~--Ga~vi~~~~~~~~~~~~~~lG---------a~~vi~~~~~d~~~~~~~~ 292 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAG--GANPICVVSSPQKAEICRAMG---------AEAIIDRNAEGYRFWKDEN 292 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHT---------CCEEEETTTTTCCSEEETT
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHhhC---------CcEEEecCcCccccccccc
Confidence 45678899999997 4 377788888875 668999998888888876541 111221111110
Q ss_pred --------------C--CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 101 --------------P--FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 101 --------------~--~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
. .....+|+|+-+.. ...+....+.++++|+++....
T Consensus 293 ~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G-------~~~~~~~~~~l~~~G~iv~~G~ 345 (456)
T 3krt_A 293 TQDPKEWKRFGKRIRELTGGEDIDIVFEHPG-------RETFGASVFVTRKGGTITTCAS 345 (456)
T ss_dssp EECHHHHHHHHHHHHHHHTSCCEEEEEECSC-------HHHHHHHHHHEEEEEEEEESCC
T ss_pred ccchHHHHHHHHHHHHHhCCCCCcEEEEcCC-------chhHHHHHHHhhCCcEEEEEec
Confidence 0 12246999986433 2457778889999999987543
No 373
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=94.81 E-value=0.16 Score=39.32 Aligned_cols=93 Identities=19% Similarity=0.174 Sum_probs=58.8
Q ss_pred CCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCCh---hHHHHHhcchhhhhhhcCCCeeEEeCC-CCC-cCCCCCcee
Q 027517 35 GDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSK---NQLSMASSRQDLVSKACYKNIEWVEGD-ALD-LPFSDCFFD 108 (222)
Q Consensus 35 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~d-~~~-~~~~~~~~D 108 (222)
+.+||-.|+|. |..+..+++.. +.+|+++|.++ +.++.+++. + ......+ +.+ +....+.+|
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~~~~----g------a~~v~~~~~~~~~~~~~~~~d 248 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY--GLEVWMANRREPTEVEQTVIEET----K------TNYYNSSNGYDKLKDSVGKFD 248 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH--TCEEEEEESSCCCHHHHHHHHHH----T------CEEEECTTCSHHHHHHHCCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCccchHHHHHHHHh----C------CceechHHHHHHHHHhCCCCC
Confidence 88999999854 66667777765 45999999988 766666543 1 1222111 110 000014599
Q ss_pred EEEEcccccCcccHHHHH-HHHhcccCCCcEEEEEecC
Q 027517 109 AITMGYGLRNVVDKRKAL-EESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 109 ~v~~~~~l~~~~~~~~~l-~~~~~~l~~gG~l~i~~~~ 145 (222)
+|+.+.... ..+ +...+.|+++|+++.....
T Consensus 249 ~vid~~g~~------~~~~~~~~~~l~~~G~iv~~g~~ 280 (366)
T 2cdc_A 249 VIIDATGAD------VNILGNVIPLLGRNGVLGLFGFS 280 (366)
T ss_dssp EEEECCCCC------THHHHHHGGGEEEEEEEEECSCC
T ss_pred EEEECCCCh------HHHHHHHHHHHhcCCEEEEEecC
Confidence 998755421 245 7788999999998876544
No 374
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=94.78 E-value=0.16 Score=38.81 Aligned_cols=99 Identities=18% Similarity=0.201 Sum_probs=63.6
Q ss_pred hhCCCCCCeEEEecC--CCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-----C
Q 027517 29 WSGAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-----P 101 (222)
Q Consensus 29 ~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-----~ 101 (222)
..+..++.+||-.|+ |.|..+..+++.. +.+++++|.+++.++.+++. + .. ..+..+-.+. .
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~~----g----~~-~~~d~~~~~~~~~i~~ 208 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETARKL----G----CH-HTINYSTQDFAEVVRE 208 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHH----T----CS-EEEETTTSCHHHHHHH
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc----C----CC-EEEECCCHHHHHHHHH
Confidence 345678899999995 4577777777764 56999999998877777542 1 11 1221111111 0
Q ss_pred -CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 102 -FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 102 -~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
.....+|+++.+..- ..++...+.|+++|+++.....
T Consensus 209 ~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~g~~ 246 (333)
T 1wly_A 209 ITGGKGVDVVYDSIGK-------DTLQKSLDCLRPRGMCAAYGHA 246 (333)
T ss_dssp HHTTCCEEEEEECSCT-------TTHHHHHHTEEEEEEEEECCCT
T ss_pred HhCCCCCeEEEECCcH-------HHHHHHHHhhccCCEEEEEecC
Confidence 112359999876542 2466778899999998776543
No 375
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.69 E-value=0.019 Score=43.25 Aligned_cols=56 Identities=21% Similarity=0.343 Sum_probs=40.8
Q ss_pred CCeeEEeCCCCC-cC-CCCCceeEEEEcccccCcc--------------------cHHHHHHHHhcccCCCcEEEEEe
Q 027517 88 KNIEWVEGDALD-LP-FSDCFFDAITMGYGLRNVV--------------------DKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 88 ~~i~~~~~d~~~-~~-~~~~~~D~v~~~~~l~~~~--------------------~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
.++.++++|+.+ ++ +++++||+|+++-...... ....+++++.++|+|||.+++..
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVV 97 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 467899999877 32 4567899999987764321 12457789999999999997753
No 376
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.64 E-value=0.22 Score=37.75 Aligned_cols=92 Identities=13% Similarity=0.151 Sum_probs=60.5
Q ss_pred eEEEecC-C-CChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-CCCCCceeEEEEc
Q 027517 37 NVLDVCC-G-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-PFSDCFFDAITMG 113 (222)
Q Consensus 37 ~vLdiG~-G-~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~v~~~ 113 (222)
+||-.|+ | .|..+..+++.. +.+|++++.+++.++.+++.-. ...+-..+.... ....+.+|+|+-+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~--Ga~Vi~~~~~~~~~~~~~~lGa--------~~vi~~~~~~~~~~~~~~~~d~v~d~ 218 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL--GYQVAAVSGRESTHGYLKSLGA--------NRILSRDEFAESRPLEKQLWAGAIDT 218 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHHHHTC--------SEEEEGGGSSCCCSSCCCCEEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhcCC--------CEEEecCCHHHHHhhcCCCccEEEEC
Confidence 4999997 4 478888888885 5699999999998888876421 111111111111 1223468988754
Q ss_pred ccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 114 YGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 114 ~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
.. ...++...+.|+++|+++.....
T Consensus 219 ~g-------~~~~~~~~~~l~~~G~iv~~G~~ 243 (324)
T 3nx4_A 219 VG-------DKVLAKVLAQMNYGGCVAACGLA 243 (324)
T ss_dssp SC-------HHHHHHHHHTEEEEEEEEECCCT
T ss_pred CC-------cHHHHHHHHHHhcCCEEEEEecC
Confidence 32 22788889999999999876544
No 377
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=94.61 E-value=0.15 Score=34.11 Aligned_cols=106 Identities=15% Similarity=0.137 Sum_probs=62.6
Q ss_pred HHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-CC-
Q 027517 25 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-PF- 102 (222)
Q Consensus 25 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~- 102 (222)
++.......++ -|||+|-|+|..-.++.+.+ |+..++++|-.-.. ... .-.+.-.++.+|+.+. +.
T Consensus 32 ~a~~~v~~~~G-pVlElGLGNGRTydHLRe~~-P~R~I~vfDR~~~~------hp~----~~P~~e~~ilGdi~~tL~~~ 99 (174)
T 3iht_A 32 HAIAQTAGLSG-PVYELGLGNGRTYHHLRQHV-QGREIYVFERAVAS------HPD----STPPEAQLILGDIRETLPAT 99 (174)
T ss_dssp HHHHHTTTCCS-CEEEECCTTCHHHHHHHHHC-CSSCEEEEESSCCC------CGG----GCCCGGGEEESCHHHHHHHH
T ss_pred HHHHHhcCCCC-ceEEecCCCChhHHHHHHhC-CCCcEEEEEeeecc------CCC----CCCchHheecccHHHHHHHH
Confidence 33333443333 69999999999999999997 67899999953211 111 1113446788888763 21
Q ss_pred ---CCCceeEEEEcccccCccc----HHHHHHHHhcccCCCcEEEEE
Q 027517 103 ---SDCFFDAITMGYGLRNVVD----KRKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 103 ---~~~~~D~v~~~~~l~~~~~----~~~~l~~~~~~l~~gG~l~i~ 142 (222)
-..+.-++-+-..-++-.. ...+-.-+..+|.|||.++-.
T Consensus 100 ~~r~g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~ 146 (174)
T 3iht_A 100 LERFGATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSS 146 (174)
T ss_dssp HHHHCSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEES
T ss_pred HHhcCCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeC
Confidence 1233444444333333321 122233456689999998653
No 378
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.58 E-value=0.19 Score=38.57 Aligned_cols=92 Identities=12% Similarity=0.200 Sum_probs=60.4
Q ss_pred CCCeEEEec-CCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCC--CCC-c-CCCCCce
Q 027517 34 TGDNVLDVC-CGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGD--ALD-L-PFSDCFF 107 (222)
Q Consensus 34 ~~~~vLdiG-~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d--~~~-~-~~~~~~~ 107 (222)
++.+||-.| +|. |..+..+++.. +.+|++++.+++.++.+++.- .-.++..+ ..+ + ....+.+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lG---------a~~vi~~~~~~~~~~~~~~~~g~ 218 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY--GLRVITTASRNETIEWTKKMG---------ADIVLNHKESLLNQFKTQGIELV 218 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCSHHHHHHHHHHT---------CSEEECTTSCHHHHHHHHTCCCE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhcC---------CcEEEECCccHHHHHHHhCCCCc
Confidence 788999994 554 77778888874 569999999998888877642 11222111 100 0 1123469
Q ss_pred eEEEEcccccCcccHHHHHHHHhcccCCCcEEEEE
Q 027517 108 DAITMGYGLRNVVDKRKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 108 D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~ 142 (222)
|+|+-+.. -...++...+.|+++|+++..
T Consensus 219 Dvv~d~~g------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 219 DYVFCTFN------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEEEESSC------HHHHHHHHHHHEEEEEEEEES
T ss_pred cEEEECCC------chHHHHHHHHHhccCCEEEEE
Confidence 99986432 245667888899999998654
No 379
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=94.51 E-value=0.11 Score=39.58 Aligned_cols=72 Identities=15% Similarity=0.171 Sum_probs=52.5
Q ss_pred CeEEEecCCCChhHHHHHHHhCCCC-cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCC-CCceeEEEEc
Q 027517 36 DNVLDVCCGSGDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS-DCFFDAITMG 113 (222)
Q Consensus 36 ~~vLdiG~G~G~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~~D~v~~~ 113 (222)
.+|||+-||-|.++.-+.+. +. .+.++|+++.+.+.-+.+. .-.++.+|+.++... -...|+++..
T Consensus 1 mkvidLFsG~GG~~~G~~~a---G~~~v~a~e~d~~a~~ty~~N~---------~~~~~~~DI~~i~~~~~~~~D~l~gg 68 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA---GFRIICANEYDKSIWKTYESNH---------SAKLIKGDISKISSDEFPKCDGIIGG 68 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT---TCEEEEEEECCTTTHHHHHHHC---------CSEEEESCGGGCCGGGSCCCSEEECC
T ss_pred CeEEEeCcCccHHHHHHHHC---CCEEEEEEeCCHHHHHHHHHHC---------CCCcccCChhhCCHhhCCcccEEEec
Confidence 37999999999999888765 34 4679999999888877664 235678898876421 2358999976
Q ss_pred ccccCc
Q 027517 114 YGLRNV 119 (222)
Q Consensus 114 ~~l~~~ 119 (222)
.....+
T Consensus 69 pPCQ~f 74 (331)
T 3ubt_Y 69 PPSQSW 74 (331)
T ss_dssp CCGGGT
T ss_pred CCCCCc
Confidence 654444
No 380
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=94.51 E-value=0.27 Score=37.87 Aligned_cols=100 Identities=9% Similarity=0.037 Sum_probs=64.3
Q ss_pred HhhCCCCC--CeEEEecC--CCChhHHHHHHHhCCCC-cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc--
Q 027517 28 SWSGAKTG--DNVLDVCC--GSGDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-- 100 (222)
Q Consensus 28 ~~~~~~~~--~~vLdiG~--G~G~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-- 100 (222)
...+..++ .+||-.|+ |.|..+..+++.. +. +|++++.+++.++.+++.+. .-..+..+-.+.
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~--Ga~~Vi~~~~~~~~~~~~~~~~g--------~~~~~d~~~~~~~~ 221 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFL--GCSRVVGICGTHEKCILLTSELG--------FDAAINYKKDNVAE 221 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSC--------CSEEEETTTSCHHH
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHHHcC--------CceEEecCchHHHH
Confidence 44567788 99999997 3466677777763 56 89999999887777765321 111221111111
Q ss_pred ---CCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 101 ---PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 101 ---~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
....+.+|+++.+.. ...++...+.|+++|+++....
T Consensus 222 ~~~~~~~~~~d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 222 QLRESCPAGVDVYFDNVG-------GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp HHHHHCTTCEEEEEESCC-------HHHHHHHHHTEEEEEEEEECCC
T ss_pred HHHHhcCCCCCEEEECCC-------HHHHHHHHHHhccCcEEEEECC
Confidence 011126899987654 2567788889999999887543
No 381
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=94.44 E-value=0.13 Score=39.76 Aligned_cols=99 Identities=17% Similarity=0.093 Sum_probs=62.7
Q ss_pred hhCCCCCCeEEEecC--CCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-----C
Q 027517 29 WSGAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-----P 101 (222)
Q Consensus 29 ~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-----~ 101 (222)
..+..++.+||-.|+ |.|..+..+++.. +.+++++|.+++.++.+++.- .. ..+..+-.+. .
T Consensus 157 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~g--------~~-~~~~~~~~~~~~~~~~ 225 (354)
T 2j8z_A 157 VGNVQAGDYVLIHAGLSGVGTAAIQLTRMA--GAIPLVTAGSQKKLQMAEKLG--------AA-AGFNYKKEDFSEATLK 225 (354)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHT--------CS-EEEETTTSCHHHHHHH
T ss_pred hcCCCCCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHcC--------Cc-EEEecCChHHHHHHHH
Confidence 345678899999984 3466777777764 568999999998887774431 11 1222111111 0
Q ss_pred -CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 102 -FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 102 -~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
.....+|+++-+..-. .+....+.|+++|+++.....
T Consensus 226 ~~~~~~~d~vi~~~G~~-------~~~~~~~~l~~~G~iv~~G~~ 263 (354)
T 2j8z_A 226 FTKGAGVNLILDCIGGS-------YWEKNVNCLALDGRWVLYGLM 263 (354)
T ss_dssp HTTTSCEEEEEESSCGG-------GHHHHHHHEEEEEEEEECCCT
T ss_pred HhcCCCceEEEECCCch-------HHHHHHHhccCCCEEEEEecc
Confidence 1224699998765421 356677889999998876543
No 382
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=94.37 E-value=0.16 Score=39.05 Aligned_cols=95 Identities=15% Similarity=0.141 Sum_probs=62.7
Q ss_pred HhhCCCCCCeEEEecC-C-CChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC----
Q 027517 28 SWSGAKTGDNVLDVCC-G-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---- 101 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---- 101 (222)
+.....++.+||-+|+ | .|..+..+++.. +.+|+++ .+++.++.+++.- ...+. +-.++.
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~--Ga~Vi~~-~~~~~~~~~~~lG----------a~~i~-~~~~~~~~~~ 209 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALAR--GARVFAT-ARGSDLEYVRDLG----------ATPID-ASREPEDYAA 209 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE-ECHHHHHHHHHHT----------SEEEE-TTSCHHHHHH
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEE-eCHHHHHHHHHcC----------CCEec-cCCCHHHHHH
Confidence 4456778999999994 4 377788888874 5689999 7888777776531 11122 222211
Q ss_pred --CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEe
Q 027517 102 --FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 102 --~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
.....+|+|+-+.. ...+....+.|+++|+++...
T Consensus 210 ~~~~~~g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 210 EHTAGQGFDLVYDTLG-------GPVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp HHHTTSCEEEEEESSC-------THHHHHHHHHEEEEEEEEESC
T ss_pred HHhcCCCceEEEECCC-------cHHHHHHHHHHhcCCeEEEEc
Confidence 12246999986543 135677788999999988754
No 383
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=94.32 E-value=0.023 Score=44.43 Aligned_cols=101 Identities=14% Similarity=0.087 Sum_probs=56.7
Q ss_pred CCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 34 TGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 34 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
++.+|+=+|+|. |......++.+ +.+|+++|.+++.++.+++... ..+.....+..++...-...|+|+.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~--Ga~V~~~d~~~~~l~~~~~~~g-------~~~~~~~~~~~~l~~~l~~aDvVi~ 237 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGM--GATVTVLDINIDKLRQLDAEFC-------GRIHTRYSSAYELEGAVKRADLVIG 237 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTT-------TSSEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhcC-------CeeEeccCCHHHHHHHHcCCCEEEE
Confidence 567999999975 55555666654 5589999999988777665321 1222211111111100124799987
Q ss_pred cccccCcccHHHHHHHHhcccCCCcEEEEEe
Q 027517 113 GYGLRNVVDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 113 ~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
+........+..+.+...+.+||||.++.+.
T Consensus 238 ~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 238 AVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 4322211111112345667889999886543
No 384
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.17 E-value=0.49 Score=30.87 Aligned_cols=69 Identities=14% Similarity=0.120 Sum_probs=44.9
Q ss_pred CCeEEEecCCCChhHHHHHHHhC-CCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC----CCCCceeE
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQVG-SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----FSDCFFDA 109 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D~ 109 (222)
..+|+-+|+|. ....+++.+. .+.+|+++|.+++.++.+++. .+.++.+|..+.. ..-..+|+
T Consensus 6 ~~~v~I~G~G~--iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~----------~~~~~~gd~~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 6 RYEYIVIGSEA--AGVGLVRELTAAGKKVLAVDKSKEKIELLEDE----------GFDAVIADPTDESFYRSLDLEGVSA 73 (141)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT----------TCEEEECCTTCHHHHHHSCCTTCSE
T ss_pred CCEEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC----------CCcEEECCCCCHHHHHhCCcccCCE
Confidence 45799999854 4444443331 356899999999877766542 4567788887632 12245898
Q ss_pred EEEccc
Q 027517 110 ITMGYG 115 (222)
Q Consensus 110 v~~~~~ 115 (222)
|+....
T Consensus 74 vi~~~~ 79 (141)
T 3llv_A 74 VLITGS 79 (141)
T ss_dssp EEECCS
T ss_pred EEEecC
Confidence 887544
No 385
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=94.04 E-value=0.5 Score=36.70 Aligned_cols=95 Identities=17% Similarity=0.122 Sum_probs=58.6
Q ss_pred CCCCCeEEEec-CC-CChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC---CCCCc
Q 027517 32 AKTGDNVLDVC-CG-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---FSDCF 106 (222)
Q Consensus 32 ~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~ 106 (222)
..++.+||-.| +| .|..+..+++.. +.+|++++ +++..+.+++. + .-.++..+-.++. .....
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~--Ga~Vi~~~-~~~~~~~~~~l----G-----a~~v~~~~~~~~~~~~~~~~g 248 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW--DAHVTAVC-SQDASELVRKL----G-----ADDVIDYKSGSVEEQLKSLKP 248 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHHHT----T-----CSEEEETTSSCHHHHHHTSCC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEe-ChHHHHHHHHc----C-----CCEEEECCchHHHHHHhhcCC
Confidence 67889999999 44 377788888875 56899988 67666666433 1 1122221111110 01135
Q ss_pred eeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEe
Q 027517 107 FDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 107 ~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
+|+|+-+..- ....+....+.++++|+++...
T Consensus 249 ~D~vid~~g~-----~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 249 FDFILDNVGG-----STETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp BSEEEESSCT-----THHHHGGGGBCSSSCCEEEESC
T ss_pred CCEEEECCCC-----hhhhhHHHHHhhcCCcEEEEeC
Confidence 8998864432 1234567788999999987653
No 386
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.95 E-value=0.029 Score=43.16 Aligned_cols=97 Identities=20% Similarity=0.222 Sum_probs=63.0
Q ss_pred hhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCC-cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-----
Q 027517 29 WSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----- 101 (222)
Q Consensus 29 ~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----- 101 (222)
..+. ++.+||-+|+|. |..+..+++.. +. +|+++|.+++.++.+++. .. .++..+-.++.
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~l-a~---------~v~~~~~~~~~~~~~~ 226 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRAS--GAGPILVSDPNPYRLAFARPY-AD---------RLVNPLEEDLLEVVRR 226 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHGGGTTT-CS---------EEECTTTSCHHHHHHH
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh-HH---------hccCcCccCHHHHHHH
Confidence 4456 889999999864 67777888774 56 899999998877766553 21 11111111110
Q ss_pred CCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 102 FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 102 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
...+.+|+|+-...- ...++...+.|+++|+++....
T Consensus 227 ~~~~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 227 VTGSGVEVLLEFSGN------EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp HHSSCEEEEEECSCC------HHHHHHHHHHEEEEEEEEECCC
T ss_pred hcCCCCCEEEECCCC------HHHHHHHHHHHhcCCEEEEEec
Confidence 012358999865431 3457778889999999887644
No 387
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.90 E-value=0.029 Score=43.75 Aligned_cols=42 Identities=17% Similarity=0.201 Sum_probs=33.6
Q ss_pred CCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhc
Q 027517 34 TGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASS 77 (222)
Q Consensus 34 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~ 77 (222)
++.+|+=+|+|. |..+..+++.+ +.+|+++|.+++.++.+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL--GAKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 567999999996 66667777776 5689999999988777765
No 388
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.87 E-value=0.31 Score=38.51 Aligned_cols=94 Identities=17% Similarity=0.126 Sum_probs=60.0
Q ss_pred CCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC----CCCCceeE
Q 027517 35 GDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----FSDCFFDA 109 (222)
Q Consensus 35 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D~ 109 (222)
..+|+-+|+|. |......+.. .+..|+++|.+++.++.++.. .+.++.+|..+.. ..-...|+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~--~g~~vvvId~d~~~v~~~~~~----------g~~vi~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLS--SGVKMVVLDHDPDHIETLRKF----------GMKVFYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TTCCEEEEECCHHHHHHHHHT----------TCCCEESCTTCHHHHHHTTTTTCSE
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCCEEEEECCHHHHHHHHhC----------CCeEEEcCCCCHHHHHhcCCCccCE
Confidence 45789999865 4444444433 356899999999998887643 5677889988742 22346788
Q ss_pred EEEcccccCcccHHHHHHHHhcccCCCcEEEEEe
Q 027517 110 ITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 110 v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
|++...- +.....+....+.+.|+..++...
T Consensus 72 viv~~~~---~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 72 LINAIDD---PQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp EEECCSS---HHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EEECCCC---hHHHHHHHHHHHHhCCCCeEEEEE
Confidence 8874421 222344555566677877776543
No 389
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.85 E-value=0.41 Score=32.91 Aligned_cols=93 Identities=13% Similarity=0.142 Sum_probs=52.2
Q ss_pred CCeEEEecCCC-ChhHHHHHHHhCC-CCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC----C-CCCce
Q 027517 35 GDNVLDVCCGS-GDLSFLLSEQVGS-QGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----F-SDCFF 107 (222)
Q Consensus 35 ~~~vLdiG~G~-G~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~-~~~~~ 107 (222)
+.+|+=+|+|. |......+.. . +.+|+++|.+++..+.+++. .+..+.+|..+.. . .-..+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~--~~g~~V~vid~~~~~~~~~~~~----------g~~~~~gd~~~~~~l~~~~~~~~a 106 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRA--RYGKISLGIEIREEAAQQHRSE----------GRNVISGDATDPDFWERILDTGHV 106 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHH--HHCSCEEEEESCHHHHHHHHHT----------TCCEEECCTTCHHHHHTBCSCCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHh--ccCCeEEEEECCHHHHHHHHHC----------CCCEEEcCCCCHHHHHhccCCCCC
Confidence 45899998764 3333333322 2 46899999999877665432 4556667765421 1 12458
Q ss_pred eEEEEcccccCcccHHHHHHHHhcccCCCcEEEEE
Q 027517 108 DAITMGYGLRNVVDKRKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 108 D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~ 142 (222)
|+|+....- ......+....+.+.|++.++..
T Consensus 107 d~vi~~~~~---~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 107 KLVLLAMPH---HQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp CEEEECCSS---HHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CEEEEeCCC---hHHHHHHHHHHHHHCCCCEEEEE
Confidence 988874321 11122223344455666676653
No 390
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.82 E-value=0.029 Score=43.57 Aligned_cols=100 Identities=12% Similarity=0.062 Sum_probs=56.5
Q ss_pred CCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEEc
Q 027517 35 GDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMG 113 (222)
Q Consensus 35 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~ 113 (222)
+.+|+=+|+|. |......++.. +.+|+++|.+++.++.+++... ..+.....+..++...-..+|+|+..
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~--Ga~V~v~dr~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~DvVI~~ 237 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLFG-------SRVELLYSNSAEIETAVAEADLLIGA 237 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHG-------GGSEEEECCHHHHHHHHHTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhhC-------ceeEeeeCCHHHHHHHHcCCCEEEEC
Confidence 47999999965 55555666664 4589999999988777765432 12222222211111001247999865
Q ss_pred ccccCcccHHHHHHHHhcccCCCcEEEEEe
Q 027517 114 YGLRNVVDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 114 ~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
-.....+.+..+.+...+.++|||.++...
T Consensus 238 ~~~~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 238 VLVPGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp CCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred CCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 544321111111344567789999876543
No 391
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.71 E-value=0.036 Score=43.14 Aligned_cols=101 Identities=12% Similarity=0.089 Sum_probs=54.8
Q ss_pred CCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 34 TGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 34 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
++.+|+=+|+|. |..+...++.. +.+|+++|.+++.++.+.+... ..+.....+..++...-..+|+|+.
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~--Ga~V~~~d~~~~~~~~~~~~~g-------~~~~~~~~~~~~l~~~~~~~DvVi~ 235 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGM--GAQVTILDVNHKRLQYLDDVFG-------GRVITLTATEANIKKSVQHADLLIG 235 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTT-------TSEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhcC-------ceEEEecCCHHHHHHHHhCCCEEEE
Confidence 357999999864 44455555553 5699999999987766654321 1222222221111100125799987
Q ss_pred cccccCcccHHHHHHHHhcccCCCcEEEEEe
Q 027517 113 GYGLRNVVDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 113 ~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
+........+..+.+...+.+++||.++.+.
T Consensus 236 ~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 236 AVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp CCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred CCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 5543321111112456677889999876543
No 392
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=93.64 E-value=0.34 Score=36.84 Aligned_cols=97 Identities=15% Similarity=0.186 Sum_probs=61.8
Q ss_pred CCCCCC-eEEEecC-C-CChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEe-CC--CCCc-CCC
Q 027517 31 GAKTGD-NVLDVCC-G-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVE-GD--ALDL-PFS 103 (222)
Q Consensus 31 ~~~~~~-~vLdiG~-G-~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~d--~~~~-~~~ 103 (222)
+..++. +||-.|+ | .|..+..+++.. +.++++++.+++.++.+++.-. . .++. .+ .... ...
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~lGa--------~-~v~~~~~~~~~~~~~~~ 214 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKR--GYDVVASTGNREAADYLKQLGA--------S-EVISREDVYDGTLKALS 214 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHH--TCCEEEEESSSSTHHHHHHHTC--------S-EEEEHHHHCSSCCCSSC
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCC--------c-EEEECCCchHHHHHHhh
Confidence 456664 8999997 4 477778888875 4689999998887777765311 1 1111 11 1111 112
Q ss_pred CCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 104 DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
.+.+|+|+-+.. . ..+....+.++++|+++.....
T Consensus 215 ~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~iv~~G~~ 249 (330)
T 1tt7_A 215 KQQWQGAVDPVG-----G--KQLASLLSKIQYGGSVAVSGLT 249 (330)
T ss_dssp CCCEEEEEESCC-----T--HHHHHHHTTEEEEEEEEECCCS
T ss_pred cCCccEEEECCc-----H--HHHHHHHHhhcCCCEEEEEecC
Confidence 346899886543 1 2577888999999999876443
No 393
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.54 E-value=0.041 Score=43.22 Aligned_cols=42 Identities=12% Similarity=0.137 Sum_probs=33.8
Q ss_pred CCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhc
Q 027517 34 TGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASS 77 (222)
Q Consensus 34 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~ 77 (222)
++.+|+=+|+|. |..+..+++.+ +.+|+++|.++..++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL--GAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH
Confidence 567999999996 66667777765 5699999999988877765
No 394
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=93.45 E-value=0.09 Score=39.57 Aligned_cols=94 Identities=18% Similarity=0.168 Sum_probs=59.9
Q ss_pred CCCCCeEEEecC-C-CChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCC-CCcCCCCCcee
Q 027517 32 AKTGDNVLDVCC-G-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA-LDLPFSDCFFD 108 (222)
Q Consensus 32 ~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~-~~~~~~~~~~D 108 (222)
..++.+||-.|+ | .|..+..+++.. +.++++++.+++.++.+++.- .-..+..+- .++...-+.+|
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~g---------a~~~~~~~~~~~~~~~~~~~d 191 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALPLALG---------AEEAATYAEVPERAKAWGGLD 191 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHHHHTT---------CSEEEEGGGHHHHHHHTTSEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhcC---------CCEEEECCcchhHHHHhcCce
Confidence 678899999997 3 477778888774 569999999888777765431 111221111 11100004689
Q ss_pred EEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 109 AITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 109 ~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
+|+- ..- ..++...+.++++|+++....
T Consensus 192 ~vid-~g~-------~~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 192 LVLE-VRG-------KEVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp EEEE-CSC-------TTHHHHHTTEEEEEEEEEC--
T ss_pred EEEE-CCH-------HHHHHHHHhhccCCEEEEEeC
Confidence 9987 432 246778889999999877543
No 395
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=93.35 E-value=0.39 Score=38.26 Aligned_cols=98 Identities=14% Similarity=0.030 Sum_probs=62.9
Q ss_pred hCCCCCCeEEEecC-C-CChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEe--CCCC-------
Q 027517 30 SGAKTGDNVLDVCC-G-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVE--GDAL------- 98 (222)
Q Consensus 30 ~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~d~~------- 98 (222)
....++.+||-.|+ | .|..+..+++.. +.++++++.+++.++.+++.-. ...+.. .|..
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~--Ga~vi~~~~~~~~~~~~~~lGa--------~~~i~~~~~~~~~~~~~~~ 285 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNG--GGIPVAVVSSAQKEAAVRALGC--------DLVINRAELGITDDIADDP 285 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTC--------CCEEEHHHHTCCTTGGGCH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhcCC--------CEEEecccccccccccccc
Confidence 45678999999997 4 377778888774 6689999999988887765311 111111 1110
Q ss_pred ------------Cc-CCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 99 ------------DL-PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 99 ------------~~-~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
.+ ......+|+|+-+..- ..++...+.++++|+++....
T Consensus 286 ~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~-------~~~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 286 RRVVETGRKLAKLVVEKAGREPDIVFEHTGR-------VTFGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCSEEEECSCH-------HHHHHHHHHSCTTCEEEESCC
T ss_pred cccchhhhHHHHHHHHHhCCCceEEEECCCc-------hHHHHHHHHHhcCCEEEEEec
Confidence 00 0012458999865432 356777789999999987643
No 396
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.03 E-value=0.082 Score=40.35 Aligned_cols=57 Identities=18% Similarity=0.005 Sum_probs=42.3
Q ss_pred CCeeEEeCCCCC-cC-CCCCceeEEEEcccccCc--------------ccHHHHHHHHhcccCCCcEEEEEec
Q 027517 88 KNIEWVEGDALD-LP-FSDCFFDAITMGYGLRNV--------------VDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 88 ~~i~~~~~d~~~-~~-~~~~~~D~v~~~~~l~~~--------------~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
.+..++++|..+ +. ++++++|+|++.-....- ......+++++++|+|||.+++..-
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFG 85 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEEC
Confidence 467888999765 33 456789999997665432 1356788999999999999988643
No 397
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=92.88 E-value=0.38 Score=36.51 Aligned_cols=97 Identities=15% Similarity=0.159 Sum_probs=60.5
Q ss_pred hCCCCCC-eEEEecC-C-CChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEe-CCC-CC-c-CC
Q 027517 30 SGAKTGD-NVLDVCC-G-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVE-GDA-LD-L-PF 102 (222)
Q Consensus 30 ~~~~~~~-~vLdiG~-G-~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~d~-~~-~-~~ 102 (222)
....++. +||-.|+ | .|..+..+++.. +.++++++.+++.++.+++.-. . .++. .+. .+ . ..
T Consensus 144 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~lGa--------~-~~i~~~~~~~~~~~~~ 212 (328)
T 1xa0_A 144 HGLTPERGPVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHDYLRVLGA--------K-EVLAREDVMAERIRPL 212 (328)
T ss_dssp TTCCGGGCCEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHHHHHHTTC--------S-EEEECC---------C
T ss_pred cCCCCCCceEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcCC--------c-EEEecCCcHHHHHHHh
Confidence 3456664 8999997 3 477788888875 5689999999888877765311 1 1111 111 01 1 11
Q ss_pred CCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 103 SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
..+.+|+|+-+..- ..+....+.++++|+++....
T Consensus 213 ~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 213 DKQRWAAAVDPVGG-------RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp CSCCEEEEEECSTT-------TTHHHHHHTEEEEEEEEECSC
T ss_pred cCCcccEEEECCcH-------HHHHHHHHhhccCCEEEEEee
Confidence 22469998865432 135667788999999887643
No 398
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.79 E-value=0.84 Score=30.37 Aligned_cols=95 Identities=16% Similarity=0.055 Sum_probs=51.3
Q ss_pred CCCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC----CCCCce
Q 027517 33 KTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----FSDCFF 107 (222)
Q Consensus 33 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~ 107 (222)
.++.+|+=+|+|. |......+.. .+.+|+++|.+++.++.++.. .....+.+|..+.. ..-..+
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~--~g~~V~vid~~~~~~~~~~~~---------~g~~~~~~d~~~~~~l~~~~~~~a 85 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASS--SGHSVVVVDKNEYAFHRLNSE---------FSGFTVVGDAAEFETLKECGMEKA 85 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCGGGGGGSCTT---------CCSEEEESCTTSHHHHHTTTGGGC
T ss_pred cCCCcEEEECCCHHHHHHHHHHHh--CCCeEEEEECCHHHHHHHHhc---------CCCcEEEecCCCHHHHHHcCcccC
Confidence 4567999999865 4443333333 256899999988765443311 23455666654321 112358
Q ss_pred eEEEEcccccCcccHHHHHHHHhcccCCCcEEEE
Q 027517 108 DAITMGYGLRNVVDKRKALEESFRVLKPGSRISV 141 (222)
Q Consensus 108 D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i 141 (222)
|+|+....- +.....+..+.+.+.+...++.
T Consensus 86 d~Vi~~~~~---~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 86 DMVFAFTND---DSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp SEEEECSSC---HHHHHHHHHHHHHTSCCSEEEE
T ss_pred CEEEEEeCC---cHHHHHHHHHHHHHCCCCeEEE
Confidence 988875431 1223333344444455555544
No 399
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.44 E-value=1.1 Score=33.99 Aligned_cols=90 Identities=22% Similarity=0.211 Sum_probs=54.9
Q ss_pred CCeEEEecCCC-Chh-HHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCC-cCCCCCceeEEE
Q 027517 35 GDNVLDVCCGS-GDL-SFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD-LPFSDCFFDAIT 111 (222)
Q Consensus 35 ~~~vLdiG~G~-G~~-~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~~D~v~ 111 (222)
..+|.-||+|. |.. +..+.+. +...+|+++|.+++.++.+.+.- .+.....|..+ . -...|+|+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~-G~~~~V~~~dr~~~~~~~a~~~G---------~~~~~~~~~~~~~---~~~aDvVi 99 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINPESISKAVDLG---------IIDEGTTSIAKVE---DFSPDFVM 99 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHHTT---------SCSEEESCTTGGG---GGCCSEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHCC---------CcchhcCCHHHHh---hccCCEEE
Confidence 36899999886 333 3444433 22228999999998887765431 11122233333 1 13479999
Q ss_pred EcccccCcccHHHHHHHHhcccCCCcEEE
Q 027517 112 MGYGLRNVVDKRKALEESFRVLKPGSRIS 140 (222)
Q Consensus 112 ~~~~l~~~~~~~~~l~~~~~~l~~gG~l~ 140 (222)
..-... ....+++++...++++..++
T Consensus 100 lavp~~---~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 100 LSSPVR---TFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp ECSCGG---GHHHHHHHHHHHSCTTCEEE
T ss_pred EeCCHH---HHHHHHHHHhhccCCCcEEE
Confidence 865433 34667888888898886543
No 400
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.41 E-value=0.093 Score=41.10 Aligned_cols=42 Identities=17% Similarity=0.155 Sum_probs=32.3
Q ss_pred CCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhc
Q 027517 34 TGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASS 77 (222)
Q Consensus 34 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~ 77 (222)
++.+|+=+|+|. |..+..+++.+ +.+|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~--Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL--GAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 578999999986 66666777765 4589999999877766654
No 401
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=92.35 E-value=2.5 Score=31.06 Aligned_cols=70 Identities=11% Similarity=0.020 Sum_probs=50.3
Q ss_pred CeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEEcc
Q 027517 36 DNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGY 114 (222)
Q Consensus 36 ~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~ 114 (222)
++||=.|| |....++++.+ ..+.+|++++-++........ .+++++.+|+.++. -..+|+|+.+.
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----------~~~~~~~~D~~d~~--~~~~d~vi~~a 71 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA----------SGAEPLLWPGEEPS--LDGVTHLLIST 71 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH----------TTEEEEESSSSCCC--CTTCCEEEECC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh----------CCCeEEEecccccc--cCCCCEEEECC
Confidence 58999994 88887777665 235689999988765433221 37899999998866 45689999877
Q ss_pred cccCc
Q 027517 115 GLRNV 119 (222)
Q Consensus 115 ~l~~~ 119 (222)
.....
T Consensus 72 ~~~~~ 76 (286)
T 3ius_A 72 APDSG 76 (286)
T ss_dssp CCBTT
T ss_pred Ccccc
Confidence 65544
No 402
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=91.89 E-value=0.3 Score=39.38 Aligned_cols=76 Identities=13% Similarity=0.155 Sum_probs=53.1
Q ss_pred CeEEEecCCCChhHHHHHHHhCCCC-cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC------------
Q 027517 36 DNVLDVCCGSGDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF------------ 102 (222)
Q Consensus 36 ~~vLdiG~G~G~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~------------ 102 (222)
.+++|+-||.|.++.-+.+. +. .+.++|+++.+.+.-+.+.... +...++..|+.++..
T Consensus 89 ~~viDLFaG~GGlslG~~~a---G~~~v~avE~d~~A~~ty~~N~~~~-----p~~~~~~~DI~~i~~~~~~~~~~~~~~ 160 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESI---GGQCVFTSEWNKHAVRTYKANHYCD-----PATHHFNEDIRDITLSHQEGVSDEAAA 160 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTT---TEEEEEEECCCHHHHHHHHHHSCCC-----TTTCEEESCTHHHHCTTCTTSCHHHHH
T ss_pred ceEEEecCCccHHHHHHHHC---CCEEEEEEeCCHHHHHHHHHhcccC-----CCcceeccchhhhhhccccccchhhHH
Confidence 58999999999999988754 44 4789999998887766654211 244567788776431
Q ss_pred -----CCCceeEEEEcccccCc
Q 027517 103 -----SDCFFDAITMGYGLRNV 119 (222)
Q Consensus 103 -----~~~~~D~v~~~~~l~~~ 119 (222)
....+|+++.......+
T Consensus 161 ~~i~~~~~~~Dvl~gGpPCQ~F 182 (482)
T 3me5_A 161 EHIRQHIPEHDVLLAGFPCQPF 182 (482)
T ss_dssp HHHHHHSCCCSEEEEECCCCCC
T ss_pred hhhhhcCCCCCEEEecCCCcch
Confidence 11358999976665554
No 403
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.85 E-value=0.077 Score=41.83 Aligned_cols=42 Identities=14% Similarity=0.105 Sum_probs=32.4
Q ss_pred CCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhc
Q 027517 34 TGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASS 77 (222)
Q Consensus 34 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~ 77 (222)
++.+|+=+|+|. |..+..+++.+ +.+|+++|.++..++.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~--Ga~V~v~D~~~~~~~~~~~ 213 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSL--GAIVRAFDTRPEVKEQVQS 213 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCGGGHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH
Confidence 467999999986 66666777765 4689999999987776643
No 404
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=91.66 E-value=0.55 Score=38.02 Aligned_cols=91 Identities=12% Similarity=0.053 Sum_probs=56.9
Q ss_pred CCCCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEE
Q 027517 32 AKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAI 110 (222)
Q Consensus 32 ~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v 110 (222)
..++++|+-+|+|. |......++.+ +.+|+++|.++...+.+.+. .+.. .++.+. -...|+|
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~--Ga~Viv~d~~~~~~~~A~~~----------Ga~~--~~l~e~---l~~aDvV 333 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ--GARVSVTEIDPINALQAMME----------GFDV--VTVEEA---IGDADIV 333 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT----------TCEE--CCHHHH---GGGCSEE
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc----------CCEE--ecHHHH---HhCCCEE
Confidence 45788999999986 65666666664 56999999999877665533 1221 222222 1357999
Q ss_pred EEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 111 TMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 111 ~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
+..-.-.++-+ ....+.+|+||+++.+..
T Consensus 334 i~atgt~~~i~-----~~~l~~mk~ggilvnvG~ 362 (494)
T 3ce6_A 334 VTATGNKDIIM-----LEHIKAMKDHAILGNIGH 362 (494)
T ss_dssp EECSSSSCSBC-----HHHHHHSCTTCEEEECSS
T ss_pred EECCCCHHHHH-----HHHHHhcCCCcEEEEeCC
Confidence 87543333222 234556899999876544
No 405
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=91.56 E-value=1 Score=32.84 Aligned_cols=102 Identities=9% Similarity=0.132 Sum_probs=63.6
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC----------
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF---------- 102 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---------- 102 (222)
.++++|=-|++. .....+++.+ ..+.+|+.++.+++.++...+.. + .++.++..|+.+...
T Consensus 7 ~gk~~lVTGas~-gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~----~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (255)
T 4eso_A 7 QGKKAIVIGGTH-GMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---G----PRVHALRSDIADLNEIAVLGAAAGQ 78 (255)
T ss_dssp TTCEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G----GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C----CcceEEEccCCCHHHHHHHHHHHHH
Confidence 466788888654 4444443332 23668999999988776655443 1 468889999887420
Q ss_pred CCCceeEEEEcccccCcc--------c-----------HHHHHHHHhcccCCCcEEEEEe
Q 027517 103 SDCFFDAITMGYGLRNVV--------D-----------KRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~~~--------~-----------~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
..+..|+++.+....... + .-.+.+.+...++++|.++.+.
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 79 TLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp HHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 013689999876654321 1 1234566677777788877654
No 406
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=91.43 E-value=2.1 Score=31.49 Aligned_cols=70 Identities=9% Similarity=-0.077 Sum_probs=43.8
Q ss_pred eEEEecCCCChhHHHHHHHhC--CCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC---CCCCceeEEE
Q 027517 37 NVLDVCCGSGDLSFLLSEQVG--SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---FSDCFFDAIT 111 (222)
Q Consensus 37 ~vLdiG~G~G~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~~D~v~ 111 (222)
+||=.| |+|.....+++.+. ++.+|.+++-+++..... . ..+++++.+|+.+.. ..-+.+|.|+
T Consensus 2 ~ilVtG-atG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-------~---~~~v~~~~~D~~d~~~l~~~~~~~d~vi 70 (289)
T 3e48_A 2 NIMLTG-ATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-------W---RGKVSVRQLDYFNQESMVEAFKGMDTVV 70 (289)
T ss_dssp CEEEET-TTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-------G---BTTBEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred EEEEEc-CCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-------h---hCCCEEEEcCCCCHHHHHHHHhCCCEEE
Confidence 467666 56766666665543 266899998876532111 1 147899999998732 1113579999
Q ss_pred Eccccc
Q 027517 112 MGYGLR 117 (222)
Q Consensus 112 ~~~~l~ 117 (222)
.+....
T Consensus 71 ~~a~~~ 76 (289)
T 3e48_A 71 FIPSII 76 (289)
T ss_dssp ECCCCC
T ss_pred EeCCCC
Confidence 776544
No 407
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.91 E-value=2.1 Score=27.44 Aligned_cols=92 Identities=12% Similarity=0.075 Sum_probs=50.5
Q ss_pred CCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC----CCCCceeE
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----FSDCFFDA 109 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D~ 109 (222)
+.+|+=+|+| .....+++.+ ..+.+++++|.+++..+...+. ..+.++.+|..+.. ..-..+|+
T Consensus 4 ~m~i~IiG~G--~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---------~~~~~~~~d~~~~~~l~~~~~~~~d~ 72 (140)
T 1lss_A 4 GMYIIIAGIG--RVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---------IDALVINGDCTKIKTLEDAGIEDADM 72 (140)
T ss_dssp -CEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---------CSSEEEESCTTSHHHHHHTTTTTCSE
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---------cCcEEEEcCCCCHHHHHHcCcccCCE
Confidence 4578888875 4444443332 1356899999988776654432 14456666665421 11245899
Q ss_pred EEEcccccCcccHHHHHHHHhcccCCCcEEEE
Q 027517 110 ITMGYGLRNVVDKRKALEESFRVLKPGSRISV 141 (222)
Q Consensus 110 v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i 141 (222)
|+....- +.....+..+.+.+.++ .+++
T Consensus 73 vi~~~~~---~~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 73 YIAVTGK---EEVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp EEECCSC---HHHHHHHHHHHHHTTCC-CEEE
T ss_pred EEEeeCC---chHHHHHHHHHHHcCCC-EEEE
Confidence 8876432 12233344455556665 4443
No 408
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=90.47 E-value=3.4 Score=29.04 Aligned_cols=95 Identities=7% Similarity=0.003 Sum_probs=53.1
Q ss_pred eEEEecCCCChhHHHHHHHhC--CCCcEEEEeCChh-HHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC---CCCceeEE
Q 027517 37 NVLDVCCGSGDLSFLLSEQVG--SQGKVIGLDFSKN-QLSMASSRQDLVSKACYKNIEWVEGDALDLPF---SDCFFDAI 110 (222)
Q Consensus 37 ~vLdiG~G~G~~~~~l~~~~~--~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~D~v 110 (222)
+||=.| |+|.....+++.+. .+.+|++++-+++ .++..... ..++.++.+|+.+... .-+..|+|
T Consensus 7 ~vlVtG-asg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~d~v 77 (221)
T 3r6d_A 7 YITILG-AAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIID--------HERVTVIEGSFQNPGXLEQAVTNAEVV 77 (221)
T ss_dssp EEEEES-TTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHT--------STTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred EEEEEe-CCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccC--------CCceEEEECCCCCHHHHHHHHcCCCEE
Confidence 478777 45555555554432 4678999998876 33222101 1578999999986320 01357999
Q ss_pred EEcccccCcccHHHHHHHHhcccCCCcEEEEEe
Q 027517 111 TMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 111 ~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
+.+.....+. ...+++.+.+ ...|+++.+.
T Consensus 78 v~~ag~~n~~-~~~~~~~~~~--~~~~~iv~iS 107 (221)
T 3r6d_A 78 FVGAMESGSD-MASIVKALSR--XNIRRVIGVS 107 (221)
T ss_dssp EESCCCCHHH-HHHHHHHHHH--TTCCEEEEEE
T ss_pred EEcCCCCChh-HHHHHHHHHh--cCCCeEEEEe
Confidence 9877654332 3333333332 1234665543
No 409
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=90.41 E-value=1.7 Score=33.63 Aligned_cols=93 Identities=14% Similarity=0.065 Sum_probs=59.2
Q ss_pred CCCCeEEEecCC--CChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-----CCCCC
Q 027517 33 KTGDNVLDVCCG--SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-----PFSDC 105 (222)
Q Consensus 33 ~~~~~vLdiG~G--~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-----~~~~~ 105 (222)
.++.+||-+|++ .|..+..+++.. +.+++++. +++-++.+++.- .-.++...-.++ ....+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~--Ga~Vi~~~-~~~~~~~~~~lG---------a~~vi~~~~~~~~~~v~~~t~g 230 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS--GYIPIATC-SPHNFDLAKSRG---------AEEVFDYRAPNLAQTIRTYTKN 230 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHHHTT---------CSEEEETTSTTHHHHHHHHTTT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe-CHHHHHHHHHcC---------CcEEEECCCchHHHHHHHHccC
Confidence 678899999984 588888888875 56888875 787777776541 122332221221 11123
Q ss_pred ceeEEEEcccccCcccHHHHHHHHhccc-CCCcEEEEEe
Q 027517 106 FFDAITMGYGLRNVVDKRKALEESFRVL-KPGSRISVLD 143 (222)
Q Consensus 106 ~~D~v~~~~~l~~~~~~~~~l~~~~~~l-~~gG~l~i~~ 143 (222)
.+|+|+-+-.- ...++...+.| +++|+++...
T Consensus 231 ~~d~v~d~~g~------~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 231 NLRYALDCITN------VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp CCCEEEESSCS------HHHHHHHHHHSCTTCEEEEESS
T ss_pred CccEEEECCCc------hHHHHHHHHHhhcCCCEEEEEe
Confidence 48998854321 34566677778 6999988754
No 410
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=90.38 E-value=0.87 Score=34.91 Aligned_cols=91 Identities=9% Similarity=-0.047 Sum_probs=56.0
Q ss_pred CeEEEe-cCC-CChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC------CCCCce
Q 027517 36 DNVLDV-CCG-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP------FSDCFF 107 (222)
Q Consensus 36 ~~vLdi-G~G-~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~~~~~~ 107 (222)
.+||-. |+| .|..+..+++.. +.+|++++.+++-++.+++.- .-.++..+-.++. .....+
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~~G---------a~~~~~~~~~~~~~~v~~~~~~~g~ 234 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE--GFRPIVTVRRDEQIALLKDIG---------AAHVLNEKAPDFEATLREVMKAEQP 234 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHHHT---------CSEEEETTSTTHHHHHHHHHHHHCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcC---------CCEEEECCcHHHHHHHHHHhcCCCC
Confidence 566654 444 366777778775 569999999998888876531 1122322212211 011358
Q ss_pred eEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 108 DAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 108 D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
|+|+-+..- ..+....+.|+++|+++....
T Consensus 235 D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 235 RIFLDAVTG-------PLASAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp CEEEESSCH-------HHHHHHHHHSCTTCEEEECCC
T ss_pred cEEEECCCC-------hhHHHHHhhhcCCCEEEEEec
Confidence 999865432 234667789999999988653
No 411
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.32 E-value=2.4 Score=31.21 Aligned_cols=105 Identities=14% Similarity=0.103 Sum_probs=62.4
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCC------------hhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFS------------KNQLSMASSRQDLVSKACYKNIEWVEGDALDL 100 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~------------~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 100 (222)
.++++|=-|++.| ....+++.+ ..+.+|+.+|.+ .+.++.........+ .++.++..|+.+.
T Consensus 9 ~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~ 83 (287)
T 3pxx_A 9 QDKVVLVTGGARG-QGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG----RKAYTAEVDVRDR 83 (287)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT----SCEEEEECCTTCH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC----CceEEEEccCCCH
Confidence 3567888886544 443333332 236689999986 444544444333222 5788999999874
Q ss_pred CC----------CCCceeEEEEcccccCc------cc-----------HHHHHHHHhcccCCCcEEEEEe
Q 027517 101 PF----------SDCFFDAITMGYGLRNV------VD-----------KRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 101 ~~----------~~~~~D~v~~~~~l~~~------~~-----------~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
.. ..+..|+++.+...... .+ ...+++.+...++.+|.++.+.
T Consensus 84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 84 AAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 20 01358999987665332 11 1234566777778888877653
No 412
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=90.06 E-value=3.6 Score=30.62 Aligned_cols=106 Identities=9% Similarity=0.087 Sum_probs=62.1
Q ss_pred CCCeEEEecCCCC-hhHHHHHHHh-CCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-----C----
Q 027517 34 TGDNVLDVCCGSG-DLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F---- 102 (222)
Q Consensus 34 ~~~~vLdiG~G~G-~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~---- 102 (222)
.++++|=.|++.| .....+++.+ ..+.+|+.++.++...+..++..... .++.++..|+.+.. +
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~ 104 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL-----GAFVAGHCDVADAASIDAVFETLE 104 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH-----TCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-----CCceEEECCCCCHHHHHHHHHHHH
Confidence 4668888887643 2333332222 23568999998865544444333222 36788899988732 0
Q ss_pred -CCCceeEEEEcccccC-------c---c--c-----------HHHHHHHHhcccCCCcEEEEEec
Q 027517 103 -SDCFFDAITMGYGLRN-------V---V--D-----------KRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 103 -~~~~~D~v~~~~~l~~-------~---~--~-----------~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
..+..|+++.+..... + + + ...+.+.+.+.++.+|.++.+..
T Consensus 105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 1136899998776543 1 0 1 12345666677777888877643
No 413
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=90.03 E-value=0.48 Score=35.16 Aligned_cols=97 Identities=15% Similarity=0.105 Sum_probs=55.8
Q ss_pred CCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEE-eCCCCCcCCCCCceeEEEEccc----cc
Q 027517 43 CGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWV-EGDALDLPFSDCFFDAITMGYG----LR 117 (222)
Q Consensus 43 ~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~d~~~~~~~~~~~D~v~~~~~----l~ 117 (222)
++.|.....+.+. ++..+..+|. -+....++.....+ .+...++ ..|+...+. .+++|+|++... -|
T Consensus 150 ~~~~~~~~~~~k~--~g~~vl~v~~---~~~~p~k~v~wi~P--i~GAt~~~~lDfg~p~~-~~k~DvV~SDMApn~sGh 221 (320)
T 2hwk_A 150 HPQSDFSSFVSKL--KGRTVLVVGE---KLSVPGKMVDWLSD--RPEATFRARLDLGIPGD-VPKYDIIFVNVRTPYKYH 221 (320)
T ss_dssp CCCCCCHHHHHTS--SCSEEEEEES---CCCCTTSEEEEEES--STTCSEECCGGGCSCTT-SCCEEEEEEECCCCCCSC
T ss_pred cCCCCHHHHHhhC--CCcEEEEEec---ccccCCceeEeecc--CCCceeecccccCCccc-cCcCCEEEEcCCCCCCCc
Confidence 5556666655554 5667777753 12222333322221 1344454 566655332 267999998554 34
Q ss_pred Ccc---cH----HHHHHHHhcccCCCcEEEEEecCCC
Q 027517 118 NVV---DK----RKALEESFRVLKPGSRISVLDFNKS 147 (222)
Q Consensus 118 ~~~---~~----~~~l~~~~~~l~~gG~l~i~~~~~~ 147 (222)
|.. |. .-+++....+|+|||.+++-.+...
T Consensus 222 ~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygga 258 (320)
T 2hwk_A 222 HYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYA 258 (320)
T ss_dssp HHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCC
T ss_pred cccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 422 22 2256777889999999998777654
No 414
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=89.99 E-value=0.91 Score=33.10 Aligned_cols=104 Identities=14% Similarity=0.116 Sum_probs=62.9
Q ss_pred CCCeEEEecCCCChhHHHHHHHhC--CCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC-----C---
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVG--SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF-----S--- 103 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-----~--- 103 (222)
.+++||-.| |+|.....+++.+. .+.+|+.++.+++..+...+.+...+ .++.++..|+.+... .
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~ 77 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG----LSPRFHQLDIDDLQSIRALRDFLR 77 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT----CCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC----CeeEEEECCCCCHHHHHHHHHHHH
Confidence 356777666 55666666655442 35689999988776655544443221 478889999887420 0
Q ss_pred --CCceeEEEEcccccCc--------cc-----------HHHHHHHHhcccCCCcEEEEE
Q 027517 104 --DCFFDAITMGYGLRNV--------VD-----------KRKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 104 --~~~~D~v~~~~~l~~~--------~~-----------~~~~l~~~~~~l~~gG~l~i~ 142 (222)
.+..|+|+.+...... .+ ...+++.+.+.++++|+++.+
T Consensus 78 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~ 137 (276)
T 1wma_A 78 KEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 137 (276)
T ss_dssp HHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence 1268999976654321 11 123456666777667777665
No 415
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=89.99 E-value=2.9 Score=30.40 Aligned_cols=108 Identities=8% Similarity=0.113 Sum_probs=63.0
Q ss_pred CCCeEEEecCCCC-hhHHHHHHHh-CCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC---------
Q 027517 34 TGDNVLDVCCGSG-DLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF--------- 102 (222)
Q Consensus 34 ~~~~vLdiG~G~G-~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--------- 102 (222)
.++++|=.|++.+ .....+++.+ ..+.+|+.++.++...+...+.....+. .++.++..|+.+...
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDR---NDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSS---CCCEEEECCCSSSHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCC---CCceEEeCCCCCHHHHHHHHHHHH
Confidence 3567888886622 2332222222 2366899998877655554444332221 368899999987420
Q ss_pred -CCCceeEEEEcccccC-------cc--c---H-----------HHHHHHHhcccCCCcEEEEEec
Q 027517 103 -SDCFFDAITMGYGLRN-------VV--D---K-----------RKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 103 -~~~~~D~v~~~~~l~~-------~~--~---~-----------~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
..+..|+++.+..... +. + . ..+++.+...++++|.++.+..
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 0135799987766543 11 1 1 1356677778888888877653
No 416
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=89.82 E-value=0.98 Score=39.87 Aligned_cols=74 Identities=14% Similarity=0.047 Sum_probs=51.4
Q ss_pred CCeEEEecCCCChhHHHHHHHhCCCC--cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc------------
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQVGSQG--KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL------------ 100 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~------------ 100 (222)
..+++|+-||.|.++.-+.+. +. .+.++|+++.+.+.-+.+. +...++..|+.++
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A---G~~~vv~avEid~~A~~ty~~N~--------p~~~~~~~DI~~l~~~~~~~di~~~ 608 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA---GISDTLWAIEMWDPAAQAFRLNN--------PGSTVFTEDCNILLKLVMAGETTNS 608 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH---TSEEEEEEECSSHHHHHHHHHHC--------TTSEEECSCHHHHHHHHHHTCSBCT
T ss_pred CCeEEEeccCccHHHHHHHHC---CCCceEEEEECCHHHHHHHHHhC--------CCCccccccHHHHhhhccchhhhhh
Confidence 448999999999999988766 43 4789999999988776664 3555665554221
Q ss_pred ---CCC-CCceeEEEEcccccCc
Q 027517 101 ---PFS-DCFFDAITMGYGLRNV 119 (222)
Q Consensus 101 ---~~~-~~~~D~v~~~~~l~~~ 119 (222)
..+ .+.+|+|+.......+
T Consensus 609 ~~~~lp~~~~vDll~GGpPCQ~F 631 (1002)
T 3swr_A 609 RGQRLPQKGDVEMLCGGPPCQGF 631 (1002)
T ss_dssp TCCBCCCTTTCSEEEECCCCTTC
T ss_pred hhhhcccCCCeeEEEEcCCCcch
Confidence 111 2468999976665444
No 417
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=89.79 E-value=2.7 Score=31.70 Aligned_cols=81 Identities=14% Similarity=0.085 Sum_probs=51.6
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-----C-----
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F----- 102 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~----- 102 (222)
.+++||-.|++.| ....+++.+ ..+.+|++++.+++.++...+.+...+.. .++.++..|+.+.. .
T Consensus 7 ~~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (319)
T 3ioy_A 7 AGRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSG--PEVMGVQLDVASREGFKMAADEVEA 83 (319)
T ss_dssp TTCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCG--GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC--CeEEEEECCCCCHHHHHHHHHHHHH
Confidence 4567888886654 444443332 24678999999998877766555432211 26888999988732 0
Q ss_pred CCCceeEEEEccccc
Q 027517 103 SDCFFDAITMGYGLR 117 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~ 117 (222)
..+..|+++.+....
T Consensus 84 ~~g~id~lv~nAg~~ 98 (319)
T 3ioy_A 84 RFGPVSILCNNAGVN 98 (319)
T ss_dssp HTCCEEEEEECCCCC
T ss_pred hCCCCCEEEECCCcC
Confidence 113689999877654
No 418
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=89.61 E-value=3 Score=27.48 Aligned_cols=95 Identities=13% Similarity=0.006 Sum_probs=54.0
Q ss_pred CCeEEEecCCCChhHHHHHHHhC-CCCcEEEEeCCh-hHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC----CCCCcee
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQVG-SQGKVIGLDFSK-NQLSMASSRQDLVSKACYKNIEWVEGDALDLP----FSDCFFD 108 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~~~-~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D 108 (222)
..+|+=+|+ |.....+++.+. .+.+|+.+|.++ +..+...... . ..+.++.+|..+.. ..-+..|
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~---~----~~~~~i~gd~~~~~~l~~a~i~~ad 73 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---G----DNADVIPGDSNDSSVLKKAGIDRCR 73 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---C----TTCEEEESCTTSHHHHHHHTTTTCS
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh---c----CCCeEEEcCCCCHHHHHHcChhhCC
Confidence 347888886 555555544432 356899999974 4333333221 1 35788889987632 1124578
Q ss_pred EEEEcccccCcccHHHHHHHHhcccCCCcEEEE
Q 027517 109 AITMGYGLRNVVDKRKALEESFRVLKPGSRISV 141 (222)
Q Consensus 109 ~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i 141 (222)
+|++...- ......+....+.+.|...++.
T Consensus 74 ~vi~~~~~---d~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 74 AILALSDN---DADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp EEEECSSC---HHHHHHHHHHHHHHTSSSCEEE
T ss_pred EEEEecCC---hHHHHHHHHHHHHHCCCCEEEE
Confidence 88875422 1233444455556666666655
No 419
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=89.60 E-value=1 Score=33.62 Aligned_cols=89 Identities=15% Similarity=-0.042 Sum_probs=52.0
Q ss_pred CCCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEe-CCCCCcCCCCCceeEE
Q 027517 33 KTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVE-GDALDLPFSDCFFDAI 110 (222)
Q Consensus 33 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~d~~~~~~~~~~~D~v 110 (222)
-++++|+=+|+|. |......++.+ +.+|+++|.+++..+.+.+. .+.... .++.+. -...|+|
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~----------g~~~~~~~~l~~~---l~~aDvV 217 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAAL--GAKVKVGARESDLLARIAEM----------GMEPFHISKAAQE---LRDVDVC 217 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHT----------TSEEEEGGGHHHH---TTTCSEE
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHC----------CCeecChhhHHHH---hcCCCEE
Confidence 3578999999875 55555555554 45899999988655443321 222221 122121 1357999
Q ss_pred EEcccccCcccHHHHHHHHhcccCCCcEEEEE
Q 027517 111 TMGYGLRNVVDKRKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 111 ~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~ 142 (222)
+.....+.+.. . ..+.++||+.++-+
T Consensus 218 i~~~p~~~i~~--~----~l~~mk~~~~lin~ 243 (293)
T 3d4o_A 218 INTIPALVVTA--N----VLAEMPSHTFVIDL 243 (293)
T ss_dssp EECCSSCCBCH--H----HHHHSCTTCEEEEC
T ss_pred EECCChHHhCH--H----HHHhcCCCCEEEEe
Confidence 98776644332 2 33457888877544
No 420
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=89.37 E-value=2.3 Score=29.97 Aligned_cols=91 Identities=8% Similarity=-0.024 Sum_probs=53.6
Q ss_pred eEEEecCCCChhHHHHHHHhC-CCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC----CCCCceeEEE
Q 027517 37 NVLDVCCGSGDLSFLLSEQVG-SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----FSDCFFDAIT 111 (222)
Q Consensus 37 ~vLdiG~G~G~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D~v~ 111 (222)
+|+=+|+ |.....+++.+. .+.+++++|.+++.++...+. ..+.++.+|..+.. ..-..+|+|+
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---------~~~~~i~gd~~~~~~l~~a~i~~ad~vi 70 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---------LKATIIHGDGSHKEILRDAEVSKNDVVV 70 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---------SSSEEEESCTTSHHHHHHHTCCTTCEEE
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---------cCCeEEEcCCCCHHHHHhcCcccCCEEE
Confidence 5777776 555555544431 356899999999877765433 25678888887632 1124578888
Q ss_pred EcccccCcccHHHHHHHHhcccCCCcEEEE
Q 027517 112 MGYGLRNVVDKRKALEESFRVLKPGSRISV 141 (222)
Q Consensus 112 ~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i 141 (222)
+...- +.....+....+.+.+...++.
T Consensus 71 ~~~~~---d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 71 ILTPR---DEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp ECCSC---HHHHHHHHHHHHHTSCCCEEEE
T ss_pred EecCC---cHHHHHHHHHHHHHcCCCeEEE
Confidence 74421 1223344445555555555543
No 421
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=89.23 E-value=1.1 Score=34.26 Aligned_cols=97 Identities=18% Similarity=0.112 Sum_probs=54.9
Q ss_pred HhhCCCCCCeEEEecCC--CChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-----
Q 027517 28 SWSGAKTGDNVLDVCCG--SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL----- 100 (222)
Q Consensus 28 ~~~~~~~~~~vLdiG~G--~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~----- 100 (222)
+.....++.+||-.|++ .|..+..+++.. ...+|++++ +++..+.++ . + .-.++..+ .++
T Consensus 136 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~-g~~~V~~~~-~~~~~~~~~-~----g-----a~~~~~~~-~~~~~~~~ 202 (349)
T 4a27_A 136 EVANLREGMSVLVHSAGGGVGQAVAQLCSTV-PNVTVFGTA-STFKHEAIK-D----S-----VTHLFDRN-ADYVQEVK 202 (349)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHTTS-TTCEEEEEE-CGGGHHHHG-G----G-----SSEEEETT-SCHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCcEEEEeC-CHHHHHHHH-c----C-----CcEEEcCC-ccHHHHHH
Confidence 44567789999999983 366667777653 245788888 555555554 1 1 11222211 111
Q ss_pred CCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 101 PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 101 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
....+.+|+|+-+-.-. .+....+.|+++|++++...
T Consensus 203 ~~~~~g~Dvv~d~~g~~-------~~~~~~~~l~~~G~~v~~G~ 239 (349)
T 4a27_A 203 RISAEGVDIVLDCLCGD-------NTGKGLSLLKPLGTYILYGS 239 (349)
T ss_dssp HHCTTCEEEEEEECC--------------CTTEEEEEEEEEEC-
T ss_pred HhcCCCceEEEECCCch-------hHHHHHHHhhcCCEEEEECC
Confidence 11234699999644311 23567889999999987654
No 422
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=89.11 E-value=3.1 Score=30.53 Aligned_cols=85 Identities=16% Similarity=0.037 Sum_probs=49.5
Q ss_pred eEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEEccc
Q 027517 37 NVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYG 115 (222)
Q Consensus 37 ~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~ 115 (222)
+|.-||+|. |......+.. .+.+|+++|.+++.++.+.+. + -......|..+. ...|+|+..-.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~~~~~~~~~~~~~----g-----~~~~~~~~~~~~----~~~D~vi~av~ 66 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRR--RGHYLIGVSRQQSTCEKAVER----Q-----LVDEAGQDLSLL----QTAKIIFLCTP 66 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHHHT----T-----SCSEEESCGGGG----TTCSEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHhC----C-----CCccccCCHHHh----CCCCEEEEECC
Confidence 577888876 3333222222 245899999998877665432 1 111112333332 34799988554
Q ss_pred ccCcccHHHHHHHHhcccCCCcEE
Q 027517 116 LRNVVDKRKALEESFRVLKPGSRI 139 (222)
Q Consensus 116 l~~~~~~~~~l~~~~~~l~~gG~l 139 (222)
-. ....+++.+...++++..+
T Consensus 67 ~~---~~~~~~~~l~~~~~~~~~v 87 (279)
T 2f1k_A 67 IQ---LILPTLEKLIPHLSPTAIV 87 (279)
T ss_dssp HH---HHHHHHHHHGGGSCTTCEE
T ss_pred HH---HHHHHHHHHHhhCCCCCEE
Confidence 22 3456778888888887654
No 423
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=89.04 E-value=4.4 Score=31.45 Aligned_cols=101 Identities=15% Similarity=0.065 Sum_probs=60.9
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEEc
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMG 113 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~ 113 (222)
.+.+||.++.+.|.++..++.. .++.+.-|--.....+.+++..+... .++.+... ..+ ....+|+|+..
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~-----~~~~~~ds~~~~~~~~~n~~~~~~~~-~~~~~~~~-~~~---~~~~~~~v~~~ 107 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH-----KPYSIGDSYISELATRENLRLNGIDE-SSVKFLDS-TAD---YPQQPGVVLIK 107 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG-----CCEEEESCHHHHHHHHHHHHHTTCCG-GGSEEEET-TSC---CCSSCSEEEEE
T ss_pred CCCCEEEECCCCCHHHHhhccC-----CceEEEhHHHHHHHHHHHHHHcCCCc-cceEeccc-ccc---cccCCCEEEEE
Confidence 4568999999999999887643 33444323433334444444332210 12444322 122 23568998884
Q ss_pred ccccCcccHHHHHHHHhcccCCCcEEEEEecC
Q 027517 114 YGLRNVVDKRKALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 114 ~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~~ 145 (222)
.. -+.......|..+...|++|+.+++....
T Consensus 108 lp-k~~~~l~~~L~~l~~~l~~~~~i~~~g~~ 138 (375)
T 4dcm_A 108 VP-KTLALLEQQLRALRKVVTSDTRIIAGAKA 138 (375)
T ss_dssp CC-SCHHHHHHHHHHHHTTCCTTSEEEEEEEG
T ss_pred cC-CCHHHHHHHHHHHHhhCCCCCEEEEEecc
Confidence 43 23344567789999999999998776544
No 424
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=88.93 E-value=0.42 Score=31.26 Aligned_cols=41 Identities=10% Similarity=0.095 Sum_probs=30.6
Q ss_pred CCCCCceeEEEEccccc-C-cccHHHHHHHHhcccCCCcEEEE
Q 027517 101 PFSDCFFDAITMGYGLR-N-VVDKRKALEESFRVLKPGSRISV 141 (222)
Q Consensus 101 ~~~~~~~D~v~~~~~l~-~-~~~~~~~l~~~~~~l~~gG~l~i 141 (222)
.++..+||.|+....-. . ..-+..++..+...|||||.|.-
T Consensus 54 sLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 54 TLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred cCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 45677899999755433 2 22238899999999999999964
No 425
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=88.40 E-value=5.2 Score=29.65 Aligned_cols=105 Identities=12% Similarity=0.029 Sum_probs=60.9
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCChhH-HHHHhcchhhhhhhcCCCeeEEeCCCCCcC-----C----
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQ-LSMASSRQDLVSKACYKNIEWVEGDALDLP-----F---- 102 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~---- 102 (222)
.++++|=.|++. .....+++.+ ..+.+|+.++.+++. .+...+.....+ .++.++..|+.+.. +
T Consensus 46 ~gk~vlVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~ 120 (291)
T 3ijr_A 46 KGKNVLITGGDS-GIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG----VKCVLLPGDLSDEQHCKDIVQETV 120 (291)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT----CCEEEEESCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC----CcEEEEECCCCCHHHHHHHHHHHH
Confidence 356788888654 4444444333 236689999987653 333333222222 47888999998732 0
Q ss_pred -CCCceeEEEEcccccCc----c-----c-----------HHHHHHHHhcccCCCcEEEEEe
Q 027517 103 -SDCFFDAITMGYGLRNV----V-----D-----------KRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 103 -~~~~~D~v~~~~~l~~~----~-----~-----------~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
..+..|+++.+...... . + ...+++.+.+.++.+|.++.+.
T Consensus 121 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 121 RQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 01358999977553321 1 1 1245667777888888877653
No 426
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=88.33 E-value=1.6 Score=32.67 Aligned_cols=90 Identities=12% Similarity=-0.040 Sum_probs=53.1
Q ss_pred CCCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEe-CCCCCcCCCCCceeEE
Q 027517 33 KTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVE-GDALDLPFSDCFFDAI 110 (222)
Q Consensus 33 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~d~~~~~~~~~~~D~v 110 (222)
-++++|+=+|+|. |......+..+ +.+|+++|.+++..+.+.+. .+.... .++.+. -...|+|
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~d~~~~~~~~~~~~----------g~~~~~~~~l~~~---l~~aDvV 219 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAAL--GANVKVGARSSAHLARITEM----------GLVPFHTDELKEH---VKDIDIC 219 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHT----------TCEEEEGGGHHHH---STTCSEE
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHC----------CCeEEchhhHHHH---hhCCCEE
Confidence 3578999999875 44444445553 56899999988655433221 222221 122221 1357999
Q ss_pred EEcccccCcccHHHHHHHHhcccCCCcEEEEEe
Q 027517 111 TMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 111 ~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
+.....+.+.. ...+.+|||+.++-+-
T Consensus 220 i~~~p~~~i~~------~~~~~mk~g~~lin~a 246 (300)
T 2rir_A 220 INTIPSMILNQ------TVLSSMTPKTLILDLA 246 (300)
T ss_dssp EECCSSCCBCH------HHHTTSCTTCEEEECS
T ss_pred EECCChhhhCH------HHHHhCCCCCEEEEEe
Confidence 98777644332 2346789988765443
No 427
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=88.18 E-value=2.9 Score=30.92 Aligned_cols=102 Identities=13% Similarity=0.159 Sum_probs=64.1
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC----------C
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----------F 102 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----------~ 102 (222)
.++.+|--|++.| ....+++.+ ..+++|..+|.+++.++...+.+ + .+...+..|+.+.. .
T Consensus 28 ~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g----~~~~~~~~Dv~~~~~v~~~~~~~~~ 99 (273)
T 4fgs_A 28 NAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G----GGAVGIQADSANLAELDRLYEKVKA 99 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C----TTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C----CCeEEEEecCCCHHHHHHHHHHHHH
Confidence 4667777776665 333333222 24679999999998887765443 2 46778888987732 0
Q ss_pred CCCceeEEEEcccccCcc---c----------------HHHHHHHHhcccCCCcEEEEEe
Q 027517 103 SDCFFDAITMGYGLRNVV---D----------------KRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~~~---~----------------~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
.-++.|+++.+....... + .-...+.+.+.|+.+|.++.+.
T Consensus 100 ~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 100 EAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp HHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred HcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 114689998776543321 1 1244667777888888876654
No 428
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=88.11 E-value=3.3 Score=30.61 Aligned_cols=89 Identities=15% Similarity=0.174 Sum_probs=51.8
Q ss_pred CeEEEecCCC-Chh-HHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEEc
Q 027517 36 DNVLDVCCGS-GDL-SFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMG 113 (222)
Q Consensus 36 ~~vLdiG~G~-G~~-~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~ 113 (222)
.+|.=||+|. |.. +..+.+. +.+.+|+++|.+++..+.+.+. + .......|..+. -...|+|+..
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~-g~~~~V~~~d~~~~~~~~~~~~----g-----~~~~~~~~~~~~---~~~aDvVila 73 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRD-HPHYKIVGYNRSDRSRDIALER----G-----IVDEATADFKVF---AALADVIILA 73 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-CTTSEEEEECSSHHHHHHHHHT----T-----SCSEEESCTTTT---GGGCSEEEEC
T ss_pred ceEEEEeeCHHHHHHHHHHHhC-CCCcEEEEEcCCHHHHHHHHHc----C-----CcccccCCHHHh---hcCCCEEEEc
Confidence 4788999886 333 3344443 3356899999998877665432 1 111122233221 1357998885
Q ss_pred ccccCcccHHHHHHHHhcc-cCCCcEEE
Q 027517 114 YGLRNVVDKRKALEESFRV-LKPGSRIS 140 (222)
Q Consensus 114 ~~l~~~~~~~~~l~~~~~~-l~~gG~l~ 140 (222)
-... ....+++.+... ++++..++
T Consensus 74 vp~~---~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 74 VPIK---KTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp SCHH---HHHHHHHHHHTSCCCTTCEEE
T ss_pred CCHH---HHHHHHHHHHhcCCCCCCEEE
Confidence 5432 235677788777 88775443
No 429
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=88.03 E-value=0.29 Score=36.01 Aligned_cols=54 Identities=4% Similarity=0.004 Sum_probs=36.1
Q ss_pred CeeEEeCCCCCc--CCCCCceeEEEEcccccCc--------------ccHHHHHHHHhcccCCCcEEEEE
Q 027517 89 NIEWVEGDALDL--PFSDCFFDAITMGYGLRNV--------------VDKRKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 89 ~i~~~~~d~~~~--~~~~~~~D~v~~~~~l~~~--------------~~~~~~l~~~~~~l~~gG~l~i~ 142 (222)
...++++|..+. ..+++++|+|++.-....- .-....++.++++|+|||.+++.
T Consensus 4 ~~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 345677776542 1345679999886654322 12356788889999999998876
No 430
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=87.82 E-value=4.7 Score=28.58 Aligned_cols=74 Identities=15% Similarity=0.166 Sum_probs=46.7
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCe-eEEeCCCCC-cCCCCCceeEE
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNI-EWVEGDALD-LPFSDCFFDAI 110 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~d~~~-~~~~~~~~D~v 110 (222)
.+++||=.| |+|.....+++.+ ..+.+|++++-+++..+.... .++ .++.+|+.+ +...-+..|+|
T Consensus 20 ~~~~ilVtG-atG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~D~v 88 (236)
T 3e8x_A 20 QGMRVLVVG-ANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----------RGASDIVVANLEEDFSHAFASIDAV 88 (236)
T ss_dssp -CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----------TTCSEEEECCTTSCCGGGGTTCSEE
T ss_pred CCCeEEEEC-CCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----------CCCceEEEcccHHHHHHHHcCCCEE
Confidence 467899888 4565555555443 235689999988876544322 267 888888862 11112358999
Q ss_pred EEcccccC
Q 027517 111 TMGYGLRN 118 (222)
Q Consensus 111 ~~~~~l~~ 118 (222)
+.+.....
T Consensus 89 i~~ag~~~ 96 (236)
T 3e8x_A 89 VFAAGSGP 96 (236)
T ss_dssp EECCCCCT
T ss_pred EECCCCCC
Confidence 98776554
No 431
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=87.74 E-value=3.6 Score=30.26 Aligned_cols=89 Identities=20% Similarity=0.190 Sum_probs=49.9
Q ss_pred eEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCC-ceeEEEEcc
Q 027517 37 NVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDC-FFDAITMGY 114 (222)
Q Consensus 37 ~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~D~v~~~~ 114 (222)
+|.-||+|. |......+...+...+|+++|.+++.++.+++. + -......|..+. -. ..|+|+..-
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~----g-----~~~~~~~~~~~~---~~~~aDvVilav 70 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----G-----IIDEGTTSIAKV---EDFSPDFVMLSS 70 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----T-----SCSEEESCGGGG---GGTCCSEEEECS
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC----C-----CcccccCCHHHH---hcCCCCEEEEcC
Confidence 678899886 443333333322122799999998877765532 1 111112233221 12 479998854
Q ss_pred cccCcccHHHHHHHHhcccCCCcEEE
Q 027517 115 GLRNVVDKRKALEESFRVLKPGSRIS 140 (222)
Q Consensus 115 ~l~~~~~~~~~l~~~~~~l~~gG~l~ 140 (222)
... ....++..+...++++..++
T Consensus 71 p~~---~~~~v~~~l~~~l~~~~iv~ 93 (281)
T 2g5c_A 71 PVR---TFREIAKKLSYILSEDATVT 93 (281)
T ss_dssp CHH---HHHHHHHHHHHHSCTTCEEE
T ss_pred CHH---HHHHHHHHHHhhCCCCcEEE
Confidence 332 23466777878888887544
No 432
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=87.26 E-value=5 Score=29.85 Aligned_cols=98 Identities=7% Similarity=-0.024 Sum_probs=51.7
Q ss_pred CeEEEecCCC-ChhH-HHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc-CCCC--CceeEE
Q 027517 36 DNVLDVCCGS-GDLS-FLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-PFSD--CFFDAI 110 (222)
Q Consensus 36 ~~vLdiG~G~-G~~~-~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~--~~~D~v 110 (222)
.+|.-+|+|. |... ..+++ .+.+|+++|.+++.++..++.-..... .........+..+. .... ..+|+|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~---~g~~V~~~~r~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~v 78 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQ---GGNDVTLIDQWPAHIEAIRKNGLIADF--NGEEVVANLPIFSPEEIDHQNEQVDLI 78 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHHCEEEEE--TTEEEEECCCEECGGGCCTTSCCCSEE
T ss_pred CeEEEECcCHHHHHHHHHHHh---CCCcEEEEECCHHHHHHHHhCCEEEEe--CCCeeEecceeecchhhcccCCCCCEE
Confidence 4788999985 3333 33332 245899999998877665543100000 00000000111111 1111 257999
Q ss_pred EEcccccCcccHHHHHHHHhcccCCCcEEEE
Q 027517 111 TMGYGLRNVVDKRKALEESFRVLKPGSRISV 141 (222)
Q Consensus 111 ~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i 141 (222)
+..-.-. ....+++.+...++++..++.
T Consensus 79 i~~v~~~---~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 79 IALTKAQ---QLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp EECSCHH---HHHHHHHHHGGGCCTTCEEEE
T ss_pred EEEeccc---cHHHHHHHHHHhcCCCCEEEE
Confidence 8755422 346778888888888765543
No 433
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=87.24 E-value=6.4 Score=28.57 Aligned_cols=105 Identities=8% Similarity=0.022 Sum_probs=64.3
Q ss_pred CCCeEEEecCCC----Chh-HHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-------
Q 027517 34 TGDNVLDVCCGS----GDL-SFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP------- 101 (222)
Q Consensus 34 ~~~~vLdiG~G~----G~~-~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------- 101 (222)
.++.+|=-|+++ |.- +..|++ .+++|...+.+++.++.+.+.....+. .++.+++.|+.+..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~---~Ga~Vvi~~r~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~ 78 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQ---LGAKLVFTYRKERSRKELEKLLEQLNQ---PEAHLYQIDVQSDEEVINGFE 78 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHH---TTCEEEEEESSGGGHHHHHHHHGGGTC---SSCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHH---CCCEEEEEECCHHHHHHHHHHHHhcCC---CcEEEEEccCCCHHHHHHHHH
Confidence 467888888543 332 334443 367999999998888777666544332 46888899987632
Q ss_pred ---CCCCceeEEEEcccccCc-------cc--H--------------HHHHHHHhcccCCCcEEEEEec
Q 027517 102 ---FSDCFFDAITMGYGLRNV-------VD--K--------------RKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 102 ---~~~~~~D~v~~~~~l~~~-------~~--~--------------~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
..-+..|+++.+..+... .+ . ....+.....++.+|.++.+..
T Consensus 79 ~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS 147 (256)
T 4fs3_A 79 QIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTY 147 (256)
T ss_dssp HHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEEC
T ss_pred HHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEec
Confidence 011468998877554321 11 1 1123445567788998876653
No 434
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=87.17 E-value=6.3 Score=28.01 Aligned_cols=92 Identities=9% Similarity=0.012 Sum_probs=56.5
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCC-CCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC----CCCCcee
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVGS-QGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----FSDCFFD 108 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D 108 (222)
...+|+=+|+ |.....+++.+.. +. |+++|.+++.++.+. . .+.++.+|..+.. ..-...|
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~----------~~~~i~gd~~~~~~l~~a~i~~ad 73 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR-S----------GANFVHGDPTRVSDLEKANVRGAR 73 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-T----------TCEEEESCTTCHHHHHHTTCTTCS
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-c----------CCeEEEcCCCCHHHHHhcCcchhc
Confidence 3458998887 5777777776633 34 999999888766554 1 5678889987632 1224578
Q ss_pred EEEEcccccCcccHHHHHHHHhcccCCCcEEEEE
Q 027517 109 AITMGYGLRNVVDKRKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 109 ~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~ 142 (222)
.|++...- ......+....+.+.|+..++..
T Consensus 74 ~vi~~~~~---d~~n~~~~~~a~~~~~~~~iia~ 104 (234)
T 2aef_A 74 AVIVDLES---DSETIHCILGIRKIDESVRIIAE 104 (234)
T ss_dssp EEEECCSC---HHHHHHHHHHHHHHCSSSEEEEE
T ss_pred EEEEcCCC---cHHHHHHHHHHHHHCCCCeEEEE
Confidence 88874321 12233344455556776666553
No 435
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=87.08 E-value=5.9 Score=30.33 Aligned_cols=96 Identities=11% Similarity=0.061 Sum_probs=53.6
Q ss_pred hCCCCCCeEEEecC-C-CChhHHHHHHHhCCCCcEE-EEeCChh---HHHHHhcchhhhhhhcCCCeeEEeC------CC
Q 027517 30 SGAKTGDNVLDVCC-G-SGDLSFLLSEQVGSQGKVI-GLDFSKN---QLSMASSRQDLVSKACYKNIEWVEG------DA 97 (222)
Q Consensus 30 ~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~~~-~~D~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~------d~ 97 (222)
.+..++.+||-.|+ | .|..+..+++.. +.+++ .++.++. ..+.+++. + .-.++.. ++
T Consensus 163 ~~~~~g~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~~~~l----G-----a~~vi~~~~~~~~~~ 231 (357)
T 1zsy_A 163 EQLQPGDSVIQNASNSGVGQAVIQIAAAL--GLRTINVVRDRPDIQKLSDRLKSL----G-----AEHVITEEELRRPEM 231 (357)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEECCCSCHHHHHHHHHHT----T-----CSEEEEHHHHHSGGG
T ss_pred hccCCCCEEEEeCCcCHHHHHHHHHHHHc--CCEEEEEecCccchHHHHHHHHhc----C-----CcEEEecCcchHHHH
Confidence 46678999999997 3 478888888876 45554 4554432 23444332 1 1111211 11
Q ss_pred CCcCCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEe
Q 027517 98 LDLPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 98 ~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
.+.......+|+|+-+-. . . ......+.++++|+++...
T Consensus 232 ~~~~~~~~~~Dvvid~~g-----~-~-~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 232 KNFFKDMPQPRLALNCVG-----G-K-SSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp GGTTSSSCCCSEEEESSC-----H-H-HHHHHHTTSCTTCEEEECC
T ss_pred HHHHhCCCCceEEEECCC-----c-H-HHHHHHHhhCCCCEEEEEe
Confidence 111111114898885432 1 1 2245678999999988763
No 436
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=87.07 E-value=0.43 Score=41.86 Aligned_cols=94 Identities=19% Similarity=0.178 Sum_probs=64.3
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC-CCCceeEE
Q 027517 32 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF-SDCFFDAI 110 (222)
Q Consensus 32 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~D~v 110 (222)
...+.++||+|.|.-.-.+.+. ++...|+.+|+.|-+-- ..... .+-.+++.|...... ....+|.|
T Consensus 819 ~~~~~~~lDlGTGPE~RiLsLi---P~~~pvtm~D~RP~ae~-----~~~w~----~~T~f~~~DyL~~~~~~~~~~D~v 886 (1289)
T 1ej6_A 819 VYDGDVVLDLGTGPEAKILELI---PATSPVTCVDIRPTAQP-----SGCWN----VRTTFLELDYLSDGWITGVRGDIV 886 (1289)
T ss_dssp CCTTCCEEEESCCSSCGGGGTS---CTTSCEEEEESSCCCSC-----STTBS----SCEEEEESCTTSSSCGGGCCCSEE
T ss_pred ecccceEEEccCCCcceeeeec---CCCCceEEecccCchhh-----hcccc----ccceeeEccccccceeecCCCcEE
Confidence 3567799999999976655554 66779999999774311 11111 467899999877543 23568999
Q ss_pred EEcccccCc-----ccHHHHHHHHhcccCCCc
Q 027517 111 TMGYGLRNV-----VDKRKALEESFRVLKPGS 137 (222)
Q Consensus 111 ~~~~~l~~~-----~~~~~~l~~~~~~l~~gG 137 (222)
.|.++|..- -+....++++.+.+++.|
T Consensus 887 t~i~SLGAA~A~a~~tl~~~~~q~l~~~~~~~ 918 (1289)
T 1ej6_A 887 TCMLSLGAAAAGKSMTFDAAFQQLIKVLSKST 918 (1289)
T ss_dssp EECSCHHHHHHHHTCCHHHHHHHHHHHHHTSC
T ss_pred EEEeechhhhhccCCcHHHHHHHHHHHHHhcC
Confidence 998887643 235667777777776655
No 437
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=86.86 E-value=5 Score=29.81 Aligned_cols=105 Identities=12% Similarity=0.088 Sum_probs=62.5
Q ss_pred CCeEEEecCCC-ChhHHHHHHHh-CCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-----C-----
Q 027517 35 GDNVLDVCCGS-GDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F----- 102 (222)
Q Consensus 35 ~~~vLdiG~G~-G~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~----- 102 (222)
++++|=.|++. ......+++.+ ..+.+|+.++.+++..+...+..... .++.++..|+.+.. +
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL-----GVKLTVPCDVSDAESVDNMFKVLAE 104 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH-----TCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-----CCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 56788888753 23333333322 23678999999876555544433222 35678889988742 0
Q ss_pred CCCceeEEEEcccccCc----------c--c-----------HHHHHHHHhcccCCCcEEEEEec
Q 027517 103 SDCFFDAITMGYGLRNV----------V--D-----------KRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~~----------~--~-----------~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
..+..|+++.+..+... + + ...+.+.+...++.+|.++.+..
T Consensus 105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 01358999987765421 1 1 12345667777778888877643
No 438
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=86.86 E-value=5.2 Score=29.23 Aligned_cols=106 Identities=15% Similarity=0.141 Sum_probs=61.5
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCC-hhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC---------
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFS-KNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF--------- 102 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--------- 102 (222)
.++++|--|++. .....+++.+ ..+.+|+.++.. ++..+...+.+...+ .++.++..|+.+...
T Consensus 17 ~~k~~lVTGas~-gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~ 91 (270)
T 3is3_A 17 DGKVALVTGSGR-GIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG----SDAIAIKADIRQVPEIVKLFDQAV 91 (270)
T ss_dssp TTCEEEESCTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT----CCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC----CcEEEEEcCCCCHHHHHHHHHHHH
Confidence 356788777654 4444443332 235688887754 444444444333222 578899999887420
Q ss_pred -CCCceeEEEEcccccCcc--------c-----------HHHHHHHHhcccCCCcEEEEEec
Q 027517 103 -SDCFFDAITMGYGLRNVV--------D-----------KRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 103 -~~~~~D~v~~~~~l~~~~--------~-----------~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
..+..|+++.+....... + ...+.+.+.+.++++|.++.+..
T Consensus 92 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 92 AHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 013579999776654321 1 12345667777888888877654
No 439
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=86.68 E-value=0.49 Score=36.63 Aligned_cols=69 Identities=13% Similarity=0.015 Sum_probs=45.2
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC---CCCCceeEE
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---FSDCFFDAI 110 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~~D~v 110 (222)
...+|+=+|| |.....+++.+....+++..|.+.+.++.+++ .+..+..|+.+.. ..-...|+|
T Consensus 15 ~~mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~-----------~~~~~~~d~~d~~~l~~~~~~~DvV 81 (365)
T 3abi_A 15 RHMKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNENLEKVKE-----------FATPLKVDASNFDKLVEVMKEFELV 81 (365)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHTT-----------TSEEEECCTTCHHHHHHHHTTCSEE
T ss_pred CccEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhc-----------cCCcEEEecCCHHHHHHHHhCCCEE
Confidence 3468999998 55555666666556789999999988776653 3445566766532 111357998
Q ss_pred EEccc
Q 027517 111 TMGYG 115 (222)
Q Consensus 111 ~~~~~ 115 (222)
++...
T Consensus 82 i~~~p 86 (365)
T 3abi_A 82 IGALP 86 (365)
T ss_dssp EECCC
T ss_pred EEecC
Confidence 87554
No 440
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=86.58 E-value=4.9 Score=29.35 Aligned_cols=81 Identities=20% Similarity=0.174 Sum_probs=52.4
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC----------C
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----------F 102 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----------~ 102 (222)
.++.+|--|++.| ....+++.+ ..+++|...|.+++.++...+.+...+ .++..+..|+.+.. .
T Consensus 8 ~gKvalVTGas~G-IG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g----~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (255)
T 4g81_D 8 TGKTALVTGSARG-LGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG----YDAHGVAFDVTDELAIEAAFSKLDA 82 (255)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT----CCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC----CcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 4666777776554 333333322 246799999999988877766654433 57888889987731 1
Q ss_pred CCCceeEEEEcccccCc
Q 027517 103 SDCFFDAITMGYGLRNV 119 (222)
Q Consensus 103 ~~~~~D~v~~~~~l~~~ 119 (222)
.-++.|+++.+......
T Consensus 83 ~~G~iDiLVNNAG~~~~ 99 (255)
T 4g81_D 83 EGIHVDILINNAGIQYR 99 (255)
T ss_dssp TTCCCCEEEECCCCCCC
T ss_pred HCCCCcEEEECCCCCCC
Confidence 22468999987765443
No 441
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=86.31 E-value=2.1 Score=31.13 Aligned_cols=105 Identities=8% Similarity=0.049 Sum_probs=60.7
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCCcEEEE-eCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-----C----
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGL-DFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F---- 102 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~-D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~---- 102 (222)
.++++|--|++.| ....+++.+ ..+.+|+.+ +.+++..+...+.+...+ .++.++..|+.+.. .
T Consensus 7 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (259)
T 3edm_A 7 TNRTIVVAGAGRD-IGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG----RSALAIKADLTNAAEVEAAISAAA 81 (259)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT----SCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC----CceEEEEcCCCCHHHHHHHHHHHH
Confidence 4567888886554 433333332 235688877 666666555544443222 47888999988742 0
Q ss_pred -CCCceeEEEEccccc-C---ccc----------------HHHHHHHHhcccCCCcEEEEEe
Q 027517 103 -SDCFFDAITMGYGLR-N---VVD----------------KRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 103 -~~~~~D~v~~~~~l~-~---~~~----------------~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
.-+..|+++.+.... . +.+ ...+.+.+.+.++++|.++.+.
T Consensus 82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 82 DKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp HHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 013689999776433 1 111 1234566667777778776654
No 442
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=86.02 E-value=2 Score=33.22 Aligned_cols=89 Identities=9% Similarity=-0.036 Sum_probs=51.7
Q ss_pred CCeEEEecCCC-ChhH-HHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 35 GDNVLDVCCGS-GDLS-FLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 35 ~~~vLdiG~G~-G~~~-~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
..+|.-||+|. |... ..+++ .+.+|+++|.+++.++...+. .+.. ..+..+........|+|++
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~---~G~~V~v~dr~~~~~~~l~~~----------g~~~-~~s~~e~~~~a~~~DvVi~ 87 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRK---GGHECVVYDLNVNAVQALERE----------GIAG-ARSIEEFCAKLVKPRVVWL 87 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHTT----------TCBC-CSSHHHHHHHSCSSCEEEE
T ss_pred CCEEEEECchHHHHHHHHHHHh---CCCEEEEEeCCHHHHHHHHHC----------CCEE-eCCHHHHHhcCCCCCEEEE
Confidence 45899999885 3333 33333 256899999999877765543 1111 1122221111123488887
Q ss_pred cccccCcccHHHHHHHHhcccCCCcEEE
Q 027517 113 GYGLRNVVDKRKALEESFRVLKPGSRIS 140 (222)
Q Consensus 113 ~~~l~~~~~~~~~l~~~~~~l~~gG~l~ 140 (222)
.-.-. ....+++.+...+++|..++
T Consensus 88 ~vp~~---~v~~vl~~l~~~l~~g~iiI 112 (358)
T 4e21_A 88 MVPAA---VVDSMLQRMTPLLAANDIVI 112 (358)
T ss_dssp CSCGG---GHHHHHHHHGGGCCTTCEEE
T ss_pred eCCHH---HHHHHHHHHHhhCCCCCEEE
Confidence 55433 45667788888888876553
No 443
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=85.99 E-value=1.6 Score=34.97 Aligned_cols=67 Identities=13% Similarity=0.135 Sum_probs=47.7
Q ss_pred CCeEEEecCCCChhHHHHHHHhC-CCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC----CCCCceeE
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQVG-SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----FSDCFFDA 109 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D~ 109 (222)
.++|+-+||| .....+++.+. .+..|+.+|.+++.++...+.+ .+..+.+|..+.. ..-+..|+
T Consensus 3 ~M~iiI~G~G--~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~---------~~~~i~Gd~~~~~~L~~Agi~~ad~ 71 (461)
T 4g65_A 3 AMKIIILGAG--QVGGTLAENLVGENNDITIVDKDGDRLRELQDKY---------DLRVVNGHASHPDVLHEAGAQDADM 71 (461)
T ss_dssp CEEEEEECCS--HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS---------SCEEEESCTTCHHHHHHHTTTTCSE
T ss_pred cCEEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc---------CcEEEEEcCCCHHHHHhcCCCcCCE
Confidence 4578877775 56666666653 3458999999999988876653 6788999998742 12245788
Q ss_pred EEE
Q 027517 110 ITM 112 (222)
Q Consensus 110 v~~ 112 (222)
+++
T Consensus 72 ~ia 74 (461)
T 4g65_A 72 LVA 74 (461)
T ss_dssp EEE
T ss_pred EEE
Confidence 876
No 444
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=85.84 E-value=8.1 Score=27.95 Aligned_cols=107 Identities=7% Similarity=0.016 Sum_probs=63.6
Q ss_pred CCCCeEEEecCC-CChhHHHHHHHh-CCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC---------
Q 027517 33 KTGDNVLDVCCG-SGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP--------- 101 (222)
Q Consensus 33 ~~~~~vLdiG~G-~G~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--------- 101 (222)
.++++||-.|++ +|.....+++.+ ..+.+|+.++.++...+..++..... .++.++..|+.+..
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~ 86 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF-----GSELVFPCDVADDAQIDALFASL 86 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT-----TCCCEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHc-----CCcEEEECCCCCHHHHHHHHHHH
Confidence 456789988974 244444444433 23568999988765544444332221 35788899988742
Q ss_pred -CCCCceeEEEEcccccC-----------cc--c-----------HHHHHHHHhcccCCCcEEEEEec
Q 027517 102 -FSDCFFDAITMGYGLRN-----------VV--D-----------KRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 102 -~~~~~~D~v~~~~~l~~-----------~~--~-----------~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
...++.|+++.+..... .+ + ...+++.+...++++|.++.+..
T Consensus 87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 154 (271)
T 3ek2_A 87 KTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSY 154 (271)
T ss_dssp HHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEec
Confidence 01136899998766532 11 1 12345666777777888766543
No 445
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=85.82 E-value=0.39 Score=35.20 Aligned_cols=43 Identities=16% Similarity=0.326 Sum_probs=30.2
Q ss_pred CceeEEEEccc----ccCcccH-------HHHHHHHhcccCCCcEEEEEecCCC
Q 027517 105 CFFDAITMGYG----LRNVVDK-------RKALEESFRVLKPGSRISVLDFNKS 147 (222)
Q Consensus 105 ~~~D~v~~~~~----l~~~~~~-------~~~l~~~~~~l~~gG~l~i~~~~~~ 147 (222)
++||+|+++.. .||.... .-+-......|+|||.+++..+..-
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyA 263 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYA 263 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCC
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeeccc
Confidence 68999998654 5666432 2234566779999999998776643
No 446
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=85.80 E-value=5.6 Score=29.51 Aligned_cols=106 Identities=11% Similarity=0.028 Sum_probs=61.5
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCCh--hHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-----C---
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSK--NQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F--- 102 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~--- 102 (222)
.++++|-.|++ |.....+++.+ ..+.+|+.++.+. ...+...+.....+ .++.++..|+.+.. .
T Consensus 48 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~ 122 (294)
T 3r3s_A 48 KDRKALVTGGD-SGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG----RKAVLLPGDLSDESFARSLVHKA 122 (294)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT----CCEEECCCCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC----CcEEEEEecCCCHHHHHHHHHHH
Confidence 35678888855 44444444433 2356898888763 33333333332222 47888889987732 0
Q ss_pred --CCCceeEEEEcccccCc-c---c----------------HHHHHHHHhcccCCCcEEEEEec
Q 027517 103 --SDCFFDAITMGYGLRNV-V---D----------------KRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 103 --~~~~~D~v~~~~~l~~~-~---~----------------~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
..+..|+++.+...... . + ...+.+.+...++.+|.++.+..
T Consensus 123 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 123 REALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp HHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 01358999987765321 1 1 12456677778888888877543
No 447
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=85.72 E-value=1.5 Score=32.61 Aligned_cols=99 Identities=12% Similarity=0.029 Sum_probs=48.5
Q ss_pred CCCCeEEEecCCCChhHHHHHHHh-CCCC-cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEE
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQV-GSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAI 110 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v 110 (222)
..++++|=+|+| ..+..++..+ ..+. +++.++-+++..+...+.+.... +.+.+...+..++...-..+|+|
T Consensus 125 l~~k~vlVlGaG--G~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~----~~~~i~~~~~~~l~~~l~~~DiV 198 (283)
T 3jyo_A 125 AKLDSVVQVGAG--GVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAV----GREAVVGVDARGIEDVIAAADGV 198 (283)
T ss_dssp CCCSEEEEECCS--HHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHH----TSCCEEEECSTTHHHHHHHSSEE
T ss_pred cCCCEEEEECCc--HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhc----CCceEEEcCHHHHHHHHhcCCEE
Confidence 457799999986 3332222211 1244 69999988776554444332211 12333333332321111358999
Q ss_pred EEcccccCcccHHHHHHHHhcccCCCcEE
Q 027517 111 TMGYGLRNVVDKRKALEESFRVLKPGSRI 139 (222)
Q Consensus 111 ~~~~~l~~~~~~~~~l~~~~~~l~~gG~l 139 (222)
+..-+....++....+ -...++++..+
T Consensus 199 InaTp~Gm~~~~~~pi--~~~~l~~~~~v 225 (283)
T 3jyo_A 199 VNATPMGMPAHPGTAF--DVSCLTKDHWV 225 (283)
T ss_dssp EECSSTTSTTSCSCSS--CGGGCCTTCEE
T ss_pred EECCCCCCCCCCCCCC--CHHHhCCCCEE
Confidence 9766654332211011 13456776544
No 448
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=85.56 E-value=5.8 Score=29.04 Aligned_cols=105 Identities=14% Similarity=0.132 Sum_probs=60.8
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCCh-hHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-----C----
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSK-NQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F---- 102 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~---- 102 (222)
.++++|=-|++.| ....+++.+ ..+.+|+.++... +..+...+.+...+ .++.++..|+.+.. .
T Consensus 30 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~ 104 (271)
T 3v2g_A 30 AGKTAFVTGGSRG-IGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG----GRAVAIRADNRDAEAIEQAIRETV 104 (271)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC----CcEEEEECCCCCHHHHHHHHHHHH
Confidence 4668888886554 444333332 2356888886543 44444433332222 57888999988742 0
Q ss_pred -CCCceeEEEEcccccCcc--------c-----------HHHHHHHHhcccCCCcEEEEEe
Q 027517 103 -SDCFFDAITMGYGLRNVV--------D-----------KRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 103 -~~~~~D~v~~~~~l~~~~--------~-----------~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
..+..|+++.+....... + ...+++.+.+.++++|.++.+.
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 105 EALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 013589999876653221 1 1234666677778888877664
No 449
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=85.40 E-value=2.4 Score=33.13 Aligned_cols=84 Identities=14% Similarity=0.104 Sum_probs=53.4
Q ss_pred CCeEEEecCCCChhHHHHHHHhC-CC-CcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-----CCCCce
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQVG-SQ-GKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----FSDCFF 107 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~~~-~~-~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~~~ 107 (222)
+++||=.| |+|.....+++.+- .+ .++++++.++..+......+.........++.++.+|+.+.. +....+
T Consensus 35 ~k~vLVTG-atG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 113 (399)
T 3nzo_A 35 QSRFLVLG-GAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQY 113 (399)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCC
T ss_pred CCEEEEEc-CChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCC
Confidence 56888888 56777766666542 34 489999998877665554433221111146889999988742 122468
Q ss_pred eEEEEcccccCc
Q 027517 108 DAITMGYGLRNV 119 (222)
Q Consensus 108 D~v~~~~~l~~~ 119 (222)
|+|+.+....+.
T Consensus 114 D~Vih~Aa~~~~ 125 (399)
T 3nzo_A 114 DYVLNLSALKHV 125 (399)
T ss_dssp SEEEECCCCCCG
T ss_pred CEEEECCCcCCC
Confidence 999977665544
No 450
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=84.76 E-value=3.6 Score=30.03 Aligned_cols=104 Identities=14% Similarity=0.244 Sum_probs=61.4
Q ss_pred CCCeEEEecC-CCChhHHHHHHHh-CCCCcEEEEeCChhH-HHHHhcchhhhhhhcCCCeeEEeCCCCCcC-----CC--
Q 027517 34 TGDNVLDVCC-GSGDLSFLLSEQV-GSQGKVIGLDFSKNQ-LSMASSRQDLVSKACYKNIEWVEGDALDLP-----FS-- 103 (222)
Q Consensus 34 ~~~~vLdiG~-G~G~~~~~l~~~~-~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~-- 103 (222)
.++++|-.|+ |+|.....+++.+ ..+.+|+.++.+++. ++...+.. + .++.++..|+.+.. +.
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~----~~~~~~~~Dv~~~~~v~~~~~~~ 78 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL---P----AKAPLLELDVQNEEHLASLAGRV 78 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS---S----SCCCEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc---C----CCceEEEccCCCHHHHHHHHHHH
Confidence 3568888887 3666655555543 235689999987654 33333222 1 36778888987632 00
Q ss_pred ---CC---ceeEEEEcccccC--------cc-----cH-----------HHHHHHHhcccCCCcEEEEEec
Q 027517 104 ---DC---FFDAITMGYGLRN--------VV-----DK-----------RKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 104 ---~~---~~D~v~~~~~l~~--------~~-----~~-----------~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
.+ ..|+++.+..... +. +. ..+.+.+.+.++++|.++.+..
T Consensus 79 ~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss 149 (269)
T 2h7i_A 79 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDF 149 (269)
T ss_dssp HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcC
Confidence 02 6899998766433 11 11 1345566666677788776543
No 451
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=84.75 E-value=3.6 Score=31.59 Aligned_cols=96 Identities=8% Similarity=-0.013 Sum_probs=55.3
Q ss_pred CCCCC-CeEEEecC-C-CChhHHHHHHHhCCCCcEEEEeCChhH----HHHHhcchhhhhhhcCCCeeEEeC------CC
Q 027517 31 GAKTG-DNVLDVCC-G-SGDLSFLLSEQVGSQGKVIGLDFSKNQ----LSMASSRQDLVSKACYKNIEWVEG------DA 97 (222)
Q Consensus 31 ~~~~~-~~vLdiG~-G-~G~~~~~l~~~~~~~~~~~~~D~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~------d~ 97 (222)
+..++ .+||-.|+ | .|..+..+++.. +.+++++.-+++. .+.+++. + .-.++.. |+
T Consensus 163 ~~~~g~~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~~~~l----G-----a~~vi~~~~~~~~~~ 231 (364)
T 1gu7_A 163 KLTPGKDWFIQNGGTSAVGKYASQIGKLL--NFNSISVIRDRPNLDEVVASLKEL----G-----ATQVITEDQNNSREF 231 (364)
T ss_dssp CCCTTTCEEEESCTTSHHHHHHHHHHHHH--TCEEEEEECCCTTHHHHHHHHHHH----T-----CSEEEEHHHHHCGGG
T ss_pred ccCCCCcEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCccccHHHHHHHHhc----C-----CeEEEecCccchHHH
Confidence 56788 99999997 4 377788888876 5577777654443 3333321 1 1112211 11
Q ss_pred CC-cC-C---CCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 98 LD-LP-F---SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 98 ~~-~~-~---~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
.+ +. . ..+.+|+|+-+-.- .... ...+.|+++|+++....
T Consensus 232 ~~~i~~~t~~~~~g~Dvvid~~G~------~~~~-~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 232 GPTIKEWIKQSGGEAKLALNCVGG------KSST-GIARKLNNNGLMLTYGG 276 (364)
T ss_dssp HHHHHHHHHHHTCCEEEEEESSCH------HHHH-HHHHTSCTTCEEEECCC
T ss_pred HHHHHHHhhccCCCceEEEECCCc------hhHH-HHHHHhccCCEEEEecC
Confidence 11 10 0 12469999864331 2223 56789999999887644
No 452
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=84.71 E-value=4.2 Score=29.61 Aligned_cols=82 Identities=15% Similarity=0.123 Sum_probs=47.7
Q ss_pred CCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-----CC-----
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----FS----- 103 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~----- 103 (222)
++++|=.|++ |.....+++.+ ..+.+|+.++.+++..+...+.+...... .++.++..|+.+.. +.
T Consensus 7 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 7 GKVALVTGAA-QGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEP--QKTLFIQCDVADQQQLRDTFRKVVDH 83 (267)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCG--GGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-CcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCC--CceEEEecCCCCHHHHHHHHHHHHHH
Confidence 5578888854 44444444332 23568999998887665443333211000 35788889988732 00
Q ss_pred CCceeEEEEcccccCc
Q 027517 104 DCFFDAITMGYGLRNV 119 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~ 119 (222)
.+..|+++.+......
T Consensus 84 ~g~id~lv~~Ag~~~~ 99 (267)
T 2gdz_A 84 FGRLDILVNNAGVNNE 99 (267)
T ss_dssp HSCCCEEEECCCCCCS
T ss_pred cCCCCEEEECCCCCCh
Confidence 1357999987765433
No 453
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=84.62 E-value=8.1 Score=28.04 Aligned_cols=105 Identities=8% Similarity=-0.007 Sum_probs=60.3
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCChh---HHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-----C--
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKN---QLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F-- 102 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-- 102 (222)
.++++|=-|++ |.....+++.+ ..+.+|+.++.+.. .++...+.+...+ .++.++..|+.+.. +
T Consensus 10 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~ 84 (262)
T 3ksu_A 10 KNKVIVIAGGI-KNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG----AKVALYQSDLSNEEEVAKLFDF 84 (262)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTT----CEEEEEECCCCSHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcC----CcEEEEECCCCCHHHHHHHHHH
Confidence 35678877755 55555555554 34568888876543 3333333322211 46888999988742 0
Q ss_pred ---CCCceeEEEEcccccCcc--------c-----------HHHHHHHHhcccCCCcEEEEEe
Q 027517 103 ---SDCFFDAITMGYGLRNVV--------D-----------KRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 103 ---~~~~~D~v~~~~~l~~~~--------~-----------~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
..+..|+++.+....... + ...+.+.+.+.|+++|.++.+.
T Consensus 85 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 85 AEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp HHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 013689999876643221 1 1234556666777788877653
No 454
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=84.59 E-value=6.6 Score=29.59 Aligned_cols=96 Identities=13% Similarity=0.011 Sum_probs=53.7
Q ss_pred CCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEE-----eCCCCCcCCCCCce
Q 027517 34 TGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWV-----EGDALDLPFSDCFF 107 (222)
Q Consensus 34 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~-----~~d~~~~~~~~~~~ 107 (222)
...+|.-+|+|. |......+.. .+.+|+.+ .+++.++..++.-..... +...+. ..|... ...+
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~--~G~~V~l~-~~~~~~~~i~~~g~~~~~---~~~~~~~~~~~~~~~~~----~~~~ 87 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLAR--AGHEVILI-ARPQHVQAIEATGLRLET---QSFDEQVKVSASSDPSA----VQGA 87 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHH--TTCEEEEE-CCHHHHHHHHHHCEEEEC---SSCEEEECCEEESCGGG----GTTC
T ss_pred cCCcEEEECcCHHHHHHHHHHHH--CCCeEEEE-EcHhHHHHHHhCCeEEEc---CCCcEEEeeeeeCCHHH----cCCC
Confidence 356899999986 4333333333 24589999 888777766543111000 111110 112211 1358
Q ss_pred eEEEEcccccCcccHHHHHHHHhcccCCCcEEEEE
Q 027517 108 DAITMGYGLRNVVDKRKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 108 D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~ 142 (222)
|+|+..-.-. ....+++.+...++++..++..
T Consensus 88 D~vilavk~~---~~~~~l~~l~~~l~~~~~iv~~ 119 (318)
T 3hwr_A 88 DLVLFCVKST---DTQSAALAMKPALAKSALVLSL 119 (318)
T ss_dssp SEEEECCCGG---GHHHHHHHHTTTSCTTCEEEEE
T ss_pred CEEEEEcccc---cHHHHHHHHHHhcCCCCEEEEe
Confidence 9988755433 4577889999999888765443
No 455
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=84.29 E-value=6.5 Score=28.75 Aligned_cols=81 Identities=14% Similarity=0.014 Sum_probs=47.9
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC-----C----
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF-----S---- 103 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-----~---- 103 (222)
.++++|-.|+ +|.....+++.+ ..+.+|++++.+++.++...+.+...+. ..++.++..|+.+... .
T Consensus 31 ~~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 31 RDRLALVTGA-SGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGY--PGTLIPYRCDLSNEEDILSMFSAIRS 107 (279)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--SSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCC--CceEEEEEecCCCHHHHHHHHHHHHH
Confidence 3567887775 455555544433 2356899999988766655443322111 1357788889876420 0
Q ss_pred -CCceeEEEEccccc
Q 027517 104 -DCFFDAITMGYGLR 117 (222)
Q Consensus 104 -~~~~D~v~~~~~l~ 117 (222)
.+.+|+|+.+....
T Consensus 108 ~~g~iD~vi~~Ag~~ 122 (279)
T 1xg5_A 108 QHSGVDICINNAGLA 122 (279)
T ss_dssp HHCCCSEEEECCCCC
T ss_pred hCCCCCEEEECCCCC
Confidence 12589999776543
No 456
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=83.95 E-value=1.4 Score=31.84 Aligned_cols=85 Identities=15% Similarity=0.125 Sum_probs=46.0
Q ss_pred CeEEEecCCC-Chh-HHHHHHHhCCCC----cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeE
Q 027517 36 DNVLDVCCGS-GDL-SFLLSEQVGSQG----KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDA 109 (222)
Q Consensus 36 ~~vLdiG~G~-G~~-~~~l~~~~~~~~----~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~ 109 (222)
.+|.-||+|. |.. ...+.+. +. +++++|.+++.++...+.. .+.. ..|..+. -...|+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~---g~~~~~~V~~~~r~~~~~~~~~~~~---------g~~~-~~~~~e~---~~~aDv 66 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK---NIVSSNQIICSDLNTANLKNASEKY---------GLTT-TTDNNEV---AKNADI 66 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT---TSSCGGGEEEECSCHHHHHHHHHHH---------CCEE-CSCHHHH---HHHCSE
T ss_pred CeEEEECccHHHHHHHHHHHhC---CCCCCCeEEEEeCCHHHHHHHHHHh---------CCEE-eCChHHH---HHhCCE
Confidence 4688899886 332 3344432 33 8999999998777665432 2221 1121111 123688
Q ss_pred EEEcccccCcccHHHHHHHHhcccCCCcEE
Q 027517 110 ITMGYGLRNVVDKRKALEESFRVLKPGSRI 139 (222)
Q Consensus 110 v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l 139 (222)
|+..-. ......+++.+...+++|..+
T Consensus 67 Vilav~---~~~~~~v~~~l~~~l~~~~~v 93 (247)
T 3gt0_A 67 LILSIK---PDLYASIINEIKEIIKNDAII 93 (247)
T ss_dssp EEECSC---TTTHHHHC---CCSSCTTCEE
T ss_pred EEEEeC---HHHHHHHHHHHHhhcCCCCEE
Confidence 877552 233456677777777776544
No 457
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=83.92 E-value=5.2 Score=29.89 Aligned_cols=88 Identities=18% Similarity=0.099 Sum_probs=49.1
Q ss_pred CCeEEEecCCC-ChhH-HHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 35 GDNVLDVCCGS-GDLS-FLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 35 ~~~vLdiG~G~-G~~~-~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
..+|.-||+|. |... ..+++ .+.+|+++|.+++.++...+. .......+..+. -...|+|+.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~---~G~~V~~~dr~~~~~~~~~~~----------g~~~~~~~~~e~---~~~aDvvi~ 70 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLR---AGLSTWGADLNPQACANLLAE----------GACGAAASAREF---AGVVDALVI 70 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHT----------TCSEEESSSTTT---TTTCSEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHH---CCCeEEEEECCHHHHHHHHHc----------CCccccCCHHHH---HhcCCEEEE
Confidence 35788899886 3332 33333 356899999999887766543 112223333332 134688887
Q ss_pred cccccCcccHHHHH---HHHhcccCCCcEEE
Q 027517 113 GYGLRNVVDKRKAL---EESFRVLKPGSRIS 140 (222)
Q Consensus 113 ~~~l~~~~~~~~~l---~~~~~~l~~gG~l~ 140 (222)
.-.-. .....++ +.+...+++|..++
T Consensus 71 ~vp~~--~~~~~v~~~~~~l~~~l~~g~ivv 99 (303)
T 3g0o_A 71 LVVNA--AQVRQVLFGEDGVAHLMKPGSAVM 99 (303)
T ss_dssp CCSSH--HHHHHHHC--CCCGGGSCTTCEEE
T ss_pred ECCCH--HHHHHHHhChhhHHhhCCCCCEEE
Confidence 44211 1123344 55566777776553
No 458
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=83.84 E-value=5.5 Score=29.41 Aligned_cols=85 Identities=13% Similarity=0.073 Sum_probs=49.9
Q ss_pred CeEEEecC-CC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEEc
Q 027517 36 DNVLDVCC-GS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMG 113 (222)
Q Consensus 36 ~~vLdiG~-G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~ 113 (222)
.+|.=||+ |. |......+.. .+.+|+++|.+++..+...+. .+.. .+..+. -...|+|+..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~--~g~~V~~~~r~~~~~~~~~~~----------g~~~--~~~~~~---~~~aDvVi~a 74 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD--SAHHLAAIEIAPEGRDRLQGM----------GIPL--TDGDGW---IDEADVVVLA 74 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH--SSSEEEEECCSHHHHHHHHHT----------TCCC--CCSSGG---GGTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHh--CCCEEEEEECCHHHHHHHHhc----------CCCc--CCHHHH---hcCCCEEEEc
Confidence 48999998 75 4333322222 246899999998877665441 1111 122221 1347999875
Q ss_pred ccccCcccHHHHHHHHhcccCCCcEEE
Q 027517 114 YGLRNVVDKRKALEESFRVLKPGSRIS 140 (222)
Q Consensus 114 ~~l~~~~~~~~~l~~~~~~l~~gG~l~ 140 (222)
-.-. ....+++.+...++++..++
T Consensus 75 v~~~---~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 75 LPDN---IIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp SCHH---HHHHHHHHHGGGSCTTCEEE
T ss_pred CCch---HHHHHHHHHHHhCCCCCEEE
Confidence 5432 24667778888888776443
No 459
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=83.60 E-value=1.9 Score=32.11 Aligned_cols=37 Identities=16% Similarity=0.092 Sum_probs=30.1
Q ss_pred CCCeEEEecCCCChhHHHHHHHhC---CCCcEEEEeCChh
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQVG---SQGKVIGLDFSKN 70 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~~---~~~~~~~~D~~~~ 70 (222)
++..|+-+|||.|.....+++.++ ...+.+.+|..+.
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~ 99 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHH 99 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCC
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcc
Confidence 467999999999999999988763 2358999998664
No 460
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=83.40 E-value=0.68 Score=35.20 Aligned_cols=54 Identities=22% Similarity=0.170 Sum_probs=38.3
Q ss_pred eeEE-eCCCCCc--CCCCCceeEEEEcccccCc-----------ccHHHHHHHHhcccCCCcEEEEEe
Q 027517 90 IEWV-EGDALDL--PFSDCFFDAITMGYGLRNV-----------VDKRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 90 i~~~-~~d~~~~--~~~~~~~D~v~~~~~l~~~-----------~~~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
..++ ++|..+. ..+++++|+|++.-....- ......+..+.++|+|||.+++..
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~ 106 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFG 106 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 4566 8887652 2455689999986665421 124567888899999999998754
No 461
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=83.14 E-value=7 Score=29.62 Aligned_cols=91 Identities=10% Similarity=0.015 Sum_probs=57.0
Q ss_pred CCeEEEecCCCChhHHHHHHHhC-CCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC----CCCCceeE
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQVG-SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----FSDCFFDA 109 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D~ 109 (222)
..+|+=+|+ |.....+++.+. .+. ++.+|.+++.++ .++ ..+.++.+|..+.. ..-+..|.
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~----------~~~~~i~gd~~~~~~L~~a~i~~a~~ 180 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLR----------SGANFVHGDPTRVSDLEKANVRGARA 180 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH----------TTCEEEESCTTSHHHHHHTCSTTEEE
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh----------CCcEEEEeCCCCHHHHHhcChhhccE
Confidence 457888886 567777776653 244 999999998877 443 36789999988742 22356888
Q ss_pred EEEcccccCcccHHHHHHHHhcccCCCcEEEEE
Q 027517 110 ITMGYGLRNVVDKRKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 110 v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~ 142 (222)
+++... -++.........+.+.|...++..
T Consensus 181 vi~~~~---~d~~n~~~~~~ar~~~~~~~iiar 210 (336)
T 1lnq_A 181 VIVDLE---SDSETIHCILGIRKIDESVRIIAE 210 (336)
T ss_dssp EEECCS---SHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred EEEcCC---ccHHHHHHHHHHHHHCCCCeEEEE
Confidence 887432 112233344455566676666543
No 462
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=83.05 E-value=3 Score=35.87 Aligned_cols=45 Identities=18% Similarity=0.169 Sum_probs=33.8
Q ss_pred CCeEEEecCCCChhHHHHHHHhC---CCC-cEEEEeCChhHHHHHhcch
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQVG---SQG-KVIGLDFSKNQLSMASSRQ 79 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~~~---~~~-~~~~~D~~~~~~~~~~~~~ 79 (222)
..+|||+-||-|+++.-+.+... ... .+.++|+++.+.+.-+.+.
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 35899999999999988876520 012 4689999999888777664
No 463
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=82.88 E-value=13 Score=27.90 Aligned_cols=101 Identities=10% Similarity=0.026 Sum_probs=49.3
Q ss_pred eEEEecCCCChh-HHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEe-CCCCCcCCCCCceeEEEEcc
Q 027517 37 NVLDVCCGSGDL-SFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVE-GDALDLPFSDCFFDAITMGY 114 (222)
Q Consensus 37 ~vLdiG~G~G~~-~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~d~~~~~~~~~~~D~v~~~~ 114 (222)
+|.=+|+|.-.. ....+...+.+.+++.+|.+++.++.....+............+.. .|..++ ...|+|+...
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~l----~~aDvViiav 77 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADT----ANSDIVIITA 77 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGG----TTCSEEEECC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHHH----CCCCEEEEeC
Confidence 577788876333 2222222112568999999987666432111110000001222222 344332 3468888766
Q ss_pred cccCccc-----H--------HHHHHHHhcccCCCcEEEEE
Q 027517 115 GLRNVVD-----K--------RKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 115 ~l~~~~~-----~--------~~~l~~~~~~l~~gG~l~i~ 142 (222)
....-+. . ..+.+.+.+. .|++++++.
T Consensus 78 ~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~viv~ 117 (310)
T 1guz_A 78 GLPRKPGMTREDLLMKNAGIVKEVTDNIMKH-SKNPIIIVV 117 (310)
T ss_dssp SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CSSCEEEEC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEE
Confidence 4332221 1 3444555555 588887664
No 464
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=82.78 E-value=8.9 Score=28.86 Aligned_cols=96 Identities=15% Similarity=0.127 Sum_probs=51.4
Q ss_pred CeEEEecCCC-ChhH-HHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEE----eCCCCCcCCCCCceeE
Q 027517 36 DNVLDVCCGS-GDLS-FLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWV----EGDALDLPFSDCFFDA 109 (222)
Q Consensus 36 ~~vLdiG~G~-G~~~-~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~----~~d~~~~~~~~~~~D~ 109 (222)
.+|.-+|+|. |... ..|++. +.+|+.++-++ .+..++.--...........+. ..|..+. .+.+|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~---g~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~---~~~~Dl 74 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT---GHCVSVVSRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAEL---ETKPDC 74 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT---TCEEEEECSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGC---SSCCSE
T ss_pred CEEEEECcCHHHHHHHHHHHhC---CCeEEEEeCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHc---CCCCCE
Confidence 4788899986 4333 334432 46899999876 2433332000000000122221 1122221 236899
Q ss_pred EEEcccccCcccHHHHHHHHhcccCCCcEEEEE
Q 027517 110 ITMGYGLRNVVDKRKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 110 v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~ 142 (222)
|+..---.... .+++.+...++++..++..
T Consensus 75 VilavK~~~~~---~~l~~l~~~l~~~t~Iv~~ 104 (320)
T 3i83_A 75 TLLCIKVVEGA---DRVGLLRDAVAPDTGIVLI 104 (320)
T ss_dssp EEECCCCCTTC---CHHHHHTTSCCTTCEEEEE
T ss_pred EEEecCCCChH---HHHHHHHhhcCCCCEEEEe
Confidence 99866655554 4677888889888766544
No 465
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=82.72 E-value=5.1 Score=24.62 Aligned_cols=69 Identities=19% Similarity=0.090 Sum_probs=42.4
Q ss_pred CCeEEEecCCCChhHHHHHHHh-CCC-CcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC---CCCCceeE
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQV-GSQ-GKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---FSDCFFDA 109 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~~-~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~~D~ 109 (222)
..+|+-+|+ |.....+++.+ ..+ .+++++|.+++.++.... ..+.....|..+.. ..-..+|+
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~----------~~~~~~~~d~~~~~~~~~~~~~~d~ 72 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR----------MGVATKQVDAKDEAGLAKALGGFDA 72 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT----------TTCEEEECCTTCHHHHHHHTTTCSE
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh----------CCCcEEEecCCCHHHHHHHHcCCCE
Confidence 468999998 44444333322 124 589999999877665541 35667777776521 01135799
Q ss_pred EEEccc
Q 027517 110 ITMGYG 115 (222)
Q Consensus 110 v~~~~~ 115 (222)
|+.+..
T Consensus 73 vi~~~~ 78 (118)
T 3ic5_A 73 VISAAP 78 (118)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 887654
No 466
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=82.72 E-value=2.6 Score=31.21 Aligned_cols=98 Identities=14% Similarity=0.073 Sum_probs=54.6
Q ss_pred CeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhh----hc-----------CCCeeEEeCCCCC
Q 027517 36 DNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK----AC-----------YKNIEWVEGDALD 99 (222)
Q Consensus 36 ~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~----~~-----------~~~i~~~~~d~~~ 99 (222)
.+|.=||+|. |......+.. .+.+|+.+|.+++.++.+.+....... .. ..++.. ..|..+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~--~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~ 81 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAF--HGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQ 81 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHH
Confidence 4788889886 3333333333 356999999999988887765321100 00 001222 223322
Q ss_pred cCCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEE
Q 027517 100 LPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRIS 140 (222)
Q Consensus 100 ~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~ 140 (222)
. -...|+|+..-. ........+++++...++|+..++
T Consensus 82 ~---~~~aDlVi~av~-~~~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 82 A---VKDADLVIEAVP-ESLDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp H---TTTCSEEEECCC-SCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred H---hccCCEEEEecc-CcHHHHHHHHHHHHhhCCCCcEEE
Confidence 1 134688887432 122234667888888888877653
No 467
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=82.28 E-value=5.4 Score=29.49 Aligned_cols=90 Identities=11% Similarity=0.045 Sum_probs=51.9
Q ss_pred CeEEEecCCC-Chh-HHHHHHHhC-CCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 36 DNVLDVCCGS-GDL-SFLLSEQVG-SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 36 ~~vLdiG~G~-G~~-~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
.+|.-||||. |.. ...+.+. + +..+|+.+|.+++.++...+.. .+... .|..+. -...|+|+.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~-g~~~~~V~v~dr~~~~~~~l~~~~---------gi~~~-~~~~~~---~~~aDvVil 69 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIAN-GYDPNRICVTNRSLDKLDFFKEKC---------GVHTT-QDNRQG---ALNADVVVL 69 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHT-TCCGGGEEEECSSSHHHHHHHHTT---------CCEEE-SCHHHH---HSSCSEEEE
T ss_pred CEEEEEcccHHHHHHHHHHHHC-CCCCCeEEEEeCCHHHHHHHHHHc---------CCEEe-CChHHH---HhcCCeEEE
Confidence 5788899986 332 3334433 1 1127999999998877766542 33332 222221 124688887
Q ss_pred cccccCcccHHHHHHHHhcc-cCCCcEEEEEe
Q 027517 113 GYGLRNVVDKRKALEESFRV-LKPGSRISVLD 143 (222)
Q Consensus 113 ~~~l~~~~~~~~~l~~~~~~-l~~gG~l~i~~ 143 (222)
.-.. .....+++++... ++++- ++++.
T Consensus 70 av~p---~~~~~vl~~l~~~~l~~~~-iiiS~ 97 (280)
T 3tri_A 70 AVKP---HQIKMVCEELKDILSETKI-LVISL 97 (280)
T ss_dssp CSCG---GGHHHHHHHHHHHHHTTTC-EEEEC
T ss_pred EeCH---HHHHHHHHHHHhhccCCCe-EEEEe
Confidence 5532 3456778888877 76654 44443
No 468
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=81.78 E-value=4.9 Score=30.19 Aligned_cols=97 Identities=18% Similarity=0.106 Sum_probs=51.0
Q ss_pred CCCeEEEecCCC-Ch-hHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEE
Q 027517 34 TGDNVLDVCCGS-GD-LSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 111 (222)
Q Consensus 34 ~~~~vLdiG~G~-G~-~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~ 111 (222)
+..+|.=+|+|. |. .+..++.. +...++..+|++++....+..... .. .+++... .|..++ ...|+|+
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~-g~~~ev~L~Di~~~~~g~a~dl~~-~~---~~~i~~t-~d~~~l----~~aD~Vi 82 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAK-GIADRLVLLDLSEGTKGATMDLEI-FN---LPNVEIS-KDLSAS----AHSKVVI 82 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECCC-----CHHHHHH-HT---CTTEEEE-SCGGGG----TTCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhc-CCCCEEEEEcCCcchHHHHHHHhh-hc---CCCeEEe-CCHHHH----CCCCEEE
Confidence 346899999996 32 44444444 333489999999863333333321 11 1345542 454332 2469998
Q ss_pred Eccccc------------CcccHHHHHHHHhcccCCCcEEEE
Q 027517 112 MGYGLR------------NVVDKRKALEESFRVLKPGSRISV 141 (222)
Q Consensus 112 ~~~~l~------------~~~~~~~~l~~~~~~l~~gG~l~i 141 (222)
...... ..+-...+++.+.+.. |++++++
T Consensus 83 ~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv 123 (303)
T 2i6t_A 83 FTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLV 123 (303)
T ss_dssp ECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEE
T ss_pred EcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEE
Confidence 765332 1111345666666664 8998766
No 469
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=81.71 E-value=3.7 Score=26.31 Aligned_cols=69 Identities=12% Similarity=0.156 Sum_probs=39.8
Q ss_pred CCeEEEecCCCChhHHHHHHHhC-CCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC----CCCCceeE
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQVG-SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----FSDCFFDA 109 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D~ 109 (222)
..+|+-+|+| .....+++.+. .+.+++.+|.+++..+..++. ....+.+|..+.. ...+.+|+
T Consensus 6 ~~~v~I~G~G--~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~----------~~~~~~~d~~~~~~l~~~~~~~~d~ 73 (144)
T 2hmt_A 6 NKQFAVIGLG--RFGGSIVKELHRMGHEVLAVDINEEKVNAYASY----------ATHAVIANATEENELLSLGIRNFEY 73 (144)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTT----------CSEEEECCTTCHHHHHTTTGGGCSE
T ss_pred CCcEEEECCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----------CCEEEEeCCCCHHHHHhcCCCCCCE
Confidence 4579999974 44444443321 245899999988665543321 2345666665421 11245899
Q ss_pred EEEccc
Q 027517 110 ITMGYG 115 (222)
Q Consensus 110 v~~~~~ 115 (222)
|+....
T Consensus 74 vi~~~~ 79 (144)
T 2hmt_A 74 VIVAIG 79 (144)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 887553
No 470
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=81.08 E-value=6 Score=29.99 Aligned_cols=88 Identities=11% Similarity=0.069 Sum_probs=53.3
Q ss_pred CeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCCh----hHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-----CCCC
Q 027517 36 DNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSK----NQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----FSDC 105 (222)
Q Consensus 36 ~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~ 105 (222)
++||=.| |+|.....+++.+ ..+.+|++++-++ +..+..... .. .+++++.+|+.+.. +...
T Consensus 11 ~~IlVtG-atG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l----~~---~~v~~~~~Dl~d~~~l~~~~~~~ 82 (346)
T 3i6i_A 11 GRVLIAG-ATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKAL----ED---KGAIIVYGLINEQEAMEKILKEH 82 (346)
T ss_dssp CCEEEEC-TTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHH----HH---TTCEEEECCTTCHHHHHHHHHHT
T ss_pred CeEEEEC-CCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHH----Hh---CCcEEEEeecCCHHHHHHHHhhC
Confidence 4788888 4666666555543 2346899998765 222221111 11 47899999998732 1112
Q ss_pred ceeEEEEcccccCcccHHHHHHHHhc
Q 027517 106 FFDAITMGYGLRNVVDKRKALEESFR 131 (222)
Q Consensus 106 ~~D~v~~~~~l~~~~~~~~~l~~~~~ 131 (222)
.+|+|+.+....++.....+++.+.+
T Consensus 83 ~~d~Vi~~a~~~n~~~~~~l~~aa~~ 108 (346)
T 3i6i_A 83 EIDIVVSTVGGESILDQIALVKAMKA 108 (346)
T ss_dssp TCCEEEECCCGGGGGGHHHHHHHHHH
T ss_pred CCCEEEECCchhhHHHHHHHHHHHHH
Confidence 58999988877666555555555544
No 471
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=80.87 E-value=6.4 Score=28.61 Aligned_cols=88 Identities=7% Similarity=0.009 Sum_probs=51.4
Q ss_pred CCeEEEecCCC-ChhH-HHHHHHhCCCCc-EEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEE
Q 027517 35 GDNVLDVCCGS-GDLS-FLLSEQVGSQGK-VIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 111 (222)
Q Consensus 35 ~~~vLdiG~G~-G~~~-~~l~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~ 111 (222)
..+|.-+|+|. |... ..+.+. +.+ +.++|.+++..+...+.. .+.. ..|..+. -...|+|+
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~---g~~~v~~~~~~~~~~~~~~~~~---------g~~~-~~~~~~~---~~~~Dvvi 73 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRK---GFRIVQVYSRTEESARELAQKV---------EAEY-TTDLAEV---NPYAKLYI 73 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHH---TCCEEEEECSSHHHHHHHHHHT---------TCEE-ESCGGGS---CSCCSEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHC---CCeEEEEEeCCHHHHHHHHHHc---------CCce-eCCHHHH---hcCCCEEE
Confidence 35799999975 4333 333333 346 899999988776655432 2222 2233332 13479998
Q ss_pred EcccccCcccHHHHHHHHhcccCCCcEEEE
Q 027517 112 MGYGLRNVVDKRKALEESFRVLKPGSRISV 141 (222)
Q Consensus 112 ~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i 141 (222)
..-.-. ....+++.+...+++|..++-
T Consensus 74 ~av~~~---~~~~v~~~l~~~~~~~~ivv~ 100 (266)
T 3d1l_A 74 VSLKDS---AFAELLQGIVEGKREEALMVH 100 (266)
T ss_dssp ECCCHH---HHHHHHHHHHTTCCTTCEEEE
T ss_pred EecCHH---HHHHHHHHHHhhcCCCcEEEE
Confidence 755332 235667777777877765543
No 472
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=80.79 E-value=16 Score=27.53 Aligned_cols=104 Identities=15% Similarity=0.079 Sum_probs=52.1
Q ss_pred CCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 34 TGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 34 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
+..+|.-+|+|. |......+...+...++..+|++++..+.....+..........+.+...+...+ ...|+|+.
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al----~~aDvVii 80 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDC----RDADLVVI 80 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGT----TTCSEEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHh----CCCCEEEE
Confidence 346899999986 3322222322233348999999987444321111111111001344443332222 24699987
Q ss_pred cccccCcc-----c--------HHHHHHHHhcccCCCcEEEEE
Q 027517 113 GYGLRNVV-----D--------KRKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 113 ~~~l~~~~-----~--------~~~~l~~~~~~l~~gG~l~i~ 142 (222)
.......+ + ...+.+.+.+. .|++++++.
T Consensus 81 a~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~~iv~ 122 (316)
T 1ldn_A 81 CAGANQKPGETRLDLVDKNIAIFRSIVESVMAS-GFQGLFLVA 122 (316)
T ss_dssp CCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH-TCCSEEEEC
T ss_pred cCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH-CCCCEEEEe
Confidence 65443322 1 13344555554 588887663
No 473
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=80.63 E-value=5.5 Score=29.13 Aligned_cols=81 Identities=12% Similarity=0.142 Sum_probs=48.7
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCC------------hhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFS------------KNQLSMASSRQDLVSKACYKNIEWVEGDALDL 100 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~------------~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 100 (222)
.++++|=-|++. .....+++.+ ..+.+|+.+|.+ ++.++...+.....+ .++.++..|+.+.
T Consensus 12 ~gk~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~ 86 (278)
T 3sx2_A 12 TGKVAFITGAAR-GQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG----SRIVARQADVRDR 86 (278)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT----CCEEEEECCTTCH
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC----CeEEEEeCCCCCH
Confidence 356788888554 4444433332 236789999976 455544444333222 5789999999874
Q ss_pred C-----CC-----CCceeEEEEcccccCc
Q 027517 101 P-----FS-----DCFFDAITMGYGLRNV 119 (222)
Q Consensus 101 ~-----~~-----~~~~D~v~~~~~l~~~ 119 (222)
. +. .+..|+++.+......
T Consensus 87 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~ 115 (278)
T 3sx2_A 87 ESLSAALQAGLDELGRLDIVVANAGIAPM 115 (278)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 2 00 1368999987765543
No 474
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=80.35 E-value=5.1 Score=29.29 Aligned_cols=105 Identities=13% Similarity=0.116 Sum_probs=58.7
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCCcEEEEe-CChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-----C----
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLD-FSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F---- 102 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~---- 102 (222)
.++++|=-|++.| ....+++.+ ..+.+|+..+ .+++..+...+.....+ .++.++..|+.+.. .
T Consensus 26 ~~k~~lVTGas~G-IG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~ 100 (267)
T 3u5t_A 26 TNKVAIVTGASRG-IGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAG----GKALTAQADVSDPAAVRRLFATAE 100 (267)
T ss_dssp -CCEEEEESCSSH-HHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC----CeEEEEEcCCCCHHHHHHHHHHHH
Confidence 4567888886554 333333222 1256777764 44445554444333222 47888899988742 0
Q ss_pred -CCCceeEEEEcccccCcc---c----------------HHHHHHHHhcccCCCcEEEEEe
Q 027517 103 -SDCFFDAITMGYGLRNVV---D----------------KRKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 103 -~~~~~D~v~~~~~l~~~~---~----------------~~~~l~~~~~~l~~gG~l~i~~ 143 (222)
..+..|+++.+....... + ...+++.+.+.++++|.++.+.
T Consensus 101 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 101 EAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp HHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 013689999877654321 1 1134556666777788877654
No 475
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=80.16 E-value=0.88 Score=40.27 Aligned_cols=92 Identities=17% Similarity=0.093 Sum_probs=63.7
Q ss_pred CCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCC-eeEEeCCCCCcCC-CCCceeEEEE
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKN-IEWVEGDALDLPF-SDCFFDAITM 112 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~d~~~~~~-~~~~~D~v~~ 112 (222)
+..+||+|.|.-.-.+.+. ++...|+.+|..|-+--.+--+ .. -++++.|...... ....+|.+.|
T Consensus 828 ~~~~lDLGTGPEcRiLsli---P~~~pvtmvD~RP~ae~~~~w~---------~~~T~yi~~DYl~~~~~~~~~~d~vta 895 (1299)
T 3iyl_W 828 LAHLLDLGTGPECRILSLI---PPTLQVTMSDSRPCAELMASFD---------PALTAYVQGDYSTAAFWNGIRCDSATA 895 (1299)
T ss_dssp GCSEEEETCCSSCSGGGSS---CTTSCEEEEESSCCSSCGGGBC---------TTTEEEEESCSSSGGGGSSCCCSEEEE
T ss_pred CCEEEEcCCCccceeeecC---CCCCceEEEecCCccccccccc---------cccceeEEeccccceeEecCCCCEEEE
Confidence 4799999999866555444 6777999999977432222111 35 7899999887543 3456899999
Q ss_pred cccccCc-----ccHHHHHHHHhcccCCCcE
Q 027517 113 GYGLRNV-----VDKRKALEESFRVLKPGSR 138 (222)
Q Consensus 113 ~~~l~~~-----~~~~~~l~~~~~~l~~gG~ 138 (222)
..+|..- -+....++++.+.+++.|.
T Consensus 896 ilSLGAA~a~a~~tl~~~l~~~l~~~~~~~v 926 (1299)
T 3iyl_W 896 IFTIGAAAAAAGTDLIAFVQQLIPRIVAAGG 926 (1299)
T ss_dssp TTTHHHHHHHTTCCHHHHHHHHHHHHHHTTC
T ss_pred eeechhhhhhCCCcHHHHHHHHHHHHHhcCc
Confidence 8877643 2456777777777777663
No 476
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=80.11 E-value=11 Score=27.67 Aligned_cols=104 Identities=13% Similarity=0.111 Sum_probs=58.3
Q ss_pred CCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCChhH-HHHHhcchhhhhhhcCCCeeEEeCCCCCcC-----CC----
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQ-LSMASSRQDLVSKACYKNIEWVEGDALDLP-----FS---- 103 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~---- 103 (222)
++++|-.|++ |.....+++.+ ..+.+|+.++.+++. .+...+.+...+ .++.++..|+.+.. +.
T Consensus 29 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~ 103 (283)
T 1g0o_A 29 GKVALVTGAG-RGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG----SDAACVKANVGVVEDIVRMFEEAVK 103 (283)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC----CCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 4577777754 55555444433 235689999877643 333222222111 46888888987632 00
Q ss_pred -CCceeEEEEcccccCcc--------cH-----------HHHHHHHhcccCCCcEEEEEe
Q 027517 104 -DCFFDAITMGYGLRNVV--------DK-----------RKALEESFRVLKPGSRISVLD 143 (222)
Q Consensus 104 -~~~~D~v~~~~~l~~~~--------~~-----------~~~l~~~~~~l~~gG~l~i~~ 143 (222)
.+..|+++.+....... +. ..+++.+.+.|+.+|.++.+.
T Consensus 104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 13579999876654321 11 124455666666778877654
No 477
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=79.88 E-value=5.8 Score=30.22 Aligned_cols=98 Identities=10% Similarity=0.017 Sum_probs=51.8
Q ss_pred CeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhh-hhhhcCC---CeeEEeCCCCCcCCCCCceeEE
Q 027517 36 DNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDL-VSKACYK---NIEWVEGDALDLPFSDCFFDAI 110 (222)
Q Consensus 36 ~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~~~~---~i~~~~~d~~~~~~~~~~~D~v 110 (222)
.+|.=+|+|. |......+.. .+.+|+++|.+++.++..++.... ....... ++.....|..+. -..+|+|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~--~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~D~v 79 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLAL--KGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA---VKDADVI 79 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH---HTTCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHH---HhcCCEE
Confidence 5799999986 4333222222 246899999998877766543100 0000000 000111121111 1347988
Q ss_pred EEcccccCcccHHHHHHHHhcccCCCcEEEE
Q 027517 111 TMGYGLRNVVDKRKALEESFRVLKPGSRISV 141 (222)
Q Consensus 111 ~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i 141 (222)
+..-.-.. ...+++.+...++++..++.
T Consensus 80 i~~v~~~~---~~~~~~~l~~~l~~~~~vv~ 107 (359)
T 1bg6_A 80 LIVVPAIH---HASIAANIASYISEGQLIIL 107 (359)
T ss_dssp EECSCGGG---HHHHHHHHGGGCCTTCEEEE
T ss_pred EEeCCchH---HHHHHHHHHHhCCCCCEEEE
Confidence 87554332 36677888888888765443
No 478
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=79.83 E-value=6.4 Score=30.64 Aligned_cols=104 Identities=15% Similarity=0.115 Sum_probs=59.9
Q ss_pred HHHHHhhCCCCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCC
Q 027517 24 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 103 (222)
Q Consensus 24 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 103 (222)
+.+++.+.. -+.+||.++.+.|.++..+. +..+++.+.-|...... +...+. .... .+ ....+
T Consensus 36 ~~l~~~~~~-~~~~~l~~n~~~g~~~~~~~----~~~~~~~~~~~~~~~~~----l~~~~~----~~~~--~~--~~~~~ 98 (381)
T 3dmg_A 36 DLLQKTVEP-FGERALDLNPGVGWGSLPLE----GRMAVERLETSRAAFRC----LTASGL----QARL--AL--PWEAA 98 (381)
T ss_dssp HHHHTTCCC-CSSEEEESSCTTSTTTGGGB----TTBEEEEEECBHHHHHH----HHHTTC----CCEE--CC--GGGSC
T ss_pred HHHHHHHHH-hCCcEEEecCCCCccccccC----CCCceEEEeCcHHHHHH----HHHcCC----Cccc--cC--CccCC
Confidence 445555444 34689999999998776654 23467776544433333 211121 1111 11 12223
Q ss_pred CCceeEEEEccccc-CcccHHHHHHHHhcccCCCcEEEEEec
Q 027517 104 DCFFDAITMGYGLR-NVVDKRKALEESFRVLKPGSRISVLDF 144 (222)
Q Consensus 104 ~~~~D~v~~~~~l~-~~~~~~~~l~~~~~~l~~gG~l~i~~~ 144 (222)
...||+|+....=+ ........|..+.+.|+|||.+++..-
T Consensus 99 ~~~~d~v~~~~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~g~ 140 (381)
T 3dmg_A 99 AGAYDLVVLALPAGRGTAYVQASLVAAARALRMGGRLYLAGD 140 (381)
T ss_dssp TTCEEEEEEECCGGGCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCCCEEEEECCcchhHHHHHHHHHHHHHhCCCCCEEEEEEc
Confidence 46799999844321 111246678888999999999887653
No 479
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=79.78 E-value=5.6 Score=31.58 Aligned_cols=88 Identities=15% Similarity=0.077 Sum_probs=51.7
Q ss_pred CCCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEE
Q 027517 33 KTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 111 (222)
Q Consensus 33 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~ 111 (222)
-.+++|+=+|+|. |......++.+ +.+|+++|.++.....+... ...+ .++.+. -...|+|+
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~--Ga~Viv~D~dp~ra~~A~~~----------G~~v--~~Leea---l~~ADIVi 280 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAM--GSIVYVTEIDPICALQACMD----------GFRL--VKLNEV---IRQVDIVI 280 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT----------TCEE--CCHHHH---TTTCSEEE
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCChhhhHHHHHc----------CCEe--ccHHHH---HhcCCEEE
Confidence 4678999999997 66666666664 56899999988644333211 2221 233332 12468888
Q ss_pred EcccccCcccHHHHHHHHhcccCCCcEEEEE
Q 027517 112 MGYGLRNVVDKRKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 112 ~~~~l~~~~~~~~~l~~~~~~l~~gG~l~i~ 142 (222)
....-.++-+ .+..+.+|+|++++-+
T Consensus 281 ~atgt~~lI~-----~e~l~~MK~gailINv 306 (435)
T 3gvp_A 281 TCTGNKNVVT-----REHLDRMKNSCIVCNM 306 (435)
T ss_dssp ECSSCSCSBC-----HHHHHHSCTTEEEEEC
T ss_pred ECCCCcccCC-----HHHHHhcCCCcEEEEe
Confidence 7422222222 2345567888876554
No 480
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=79.48 E-value=7.8 Score=28.28 Aligned_cols=78 Identities=14% Similarity=0.186 Sum_probs=51.5
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC----------C
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----------F 102 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----------~ 102 (222)
+++.+|-=|++.| ....+++.+ ..+++|..+|.+++.++...+.+...+ .++..++.|+.+.. .
T Consensus 6 ~gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g----~~~~~~~~Dvt~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 6 KNKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG----KEVLGVKADVSKKKDVEEFVRRTFE 80 (254)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC----CcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4667777776655 333333222 246799999999998887777665433 57888999998742 0
Q ss_pred CCCceeEEEEcccc
Q 027517 103 SDCFFDAITMGYGL 116 (222)
Q Consensus 103 ~~~~~D~v~~~~~l 116 (222)
.-++.|+++.+..+
T Consensus 81 ~~G~iDiLVNNAGi 94 (254)
T 4fn4_A 81 TYSRIDVLCNNAGI 94 (254)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCcc
Confidence 11468999977653
No 481
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=79.46 E-value=9.6 Score=27.65 Aligned_cols=78 Identities=13% Similarity=0.009 Sum_probs=50.1
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-----C-----
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F----- 102 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~----- 102 (222)
.++++|=-|++.| ....+++.+ ..+.+|+.++.+++.++...+.+...+ .++.++..|+.+.. .
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (264)
T 3ucx_A 10 TDKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG----RRALSVGTDITDDAQVAHLVDETMK 84 (264)
T ss_dssp TTCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC----CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4567888887655 333333222 236789999999887777665554332 57889999998742 0
Q ss_pred CCCceeEEEEcccc
Q 027517 103 SDCFFDAITMGYGL 116 (222)
Q Consensus 103 ~~~~~D~v~~~~~l 116 (222)
..++.|+++.+...
T Consensus 85 ~~g~id~lv~nAg~ 98 (264)
T 3ucx_A 85 AYGRVDVVINNAFR 98 (264)
T ss_dssp HTSCCSEEEECCCS
T ss_pred HcCCCcEEEECCCC
Confidence 11368999987644
No 482
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=79.13 E-value=9.5 Score=28.73 Aligned_cols=89 Identities=11% Similarity=-0.077 Sum_probs=48.7
Q ss_pred CCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 34 TGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 34 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
...+|.-||+|. |......+.. .+.+|+++|.+++..+...+. .+.. ..+..+.. ...|+|+.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~--~G~~V~~~dr~~~~~~~l~~~----------g~~~-~~~~~e~~---~~aDvVi~ 93 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCE--AGYALQVWNRTPARAASLAAL----------GATI-HEQARAAA---RDADIVVS 93 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHH--TTCEEEEECSCHHHHHHHHTT----------TCEE-ESSHHHHH---TTCSEEEE
T ss_pred CCCEEEEECccHHHHHHHHHHHh--CCCeEEEEcCCHHHHHHHHHC----------CCEe-eCCHHHHH---hcCCEEEE
Confidence 345899999996 4333322222 356899999999877665443 2222 22322211 23688887
Q ss_pred cccccCcccHHHHHH--HHhcccCCCcEEE
Q 027517 113 GYGLRNVVDKRKALE--ESFRVLKPGSRIS 140 (222)
Q Consensus 113 ~~~l~~~~~~~~~l~--~~~~~l~~gG~l~ 140 (222)
.-.- -.....++. .+...+++|..++
T Consensus 94 ~vp~--~~~~~~v~~~~~~~~~l~~~~~vi 121 (320)
T 4dll_A 94 MLEN--GAVVQDVLFAQGVAAAMKPGSLFL 121 (320)
T ss_dssp CCSS--HHHHHHHHTTTCHHHHCCTTCEEE
T ss_pred ECCC--HHHHHHHHcchhHHhhCCCCCEEE
Confidence 4421 012234444 5556677776554
No 483
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=78.80 E-value=14 Score=25.68 Aligned_cols=95 Identities=7% Similarity=-0.013 Sum_probs=56.2
Q ss_pred eEEEecCCCChhHHHHHHHh-CCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC-CCCceeEEEEcc
Q 027517 37 NVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF-SDCFFDAITMGY 114 (222)
Q Consensus 37 ~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~D~v~~~~ 114 (222)
+||=.| |+|.....+++.+ ..+.+|++++-++..+..... .+++++.+|+.+... .-+.+|+|+.+.
T Consensus 2 kilVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----------~~~~~~~~D~~d~~~~~~~~~d~vi~~a 70 (224)
T 3h2s_A 2 KIAVLG-ATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLG----------ATVATLVKEPLVLTEADLDSVDAVVDAL 70 (224)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTC----------TTSEEEECCGGGCCHHHHTTCSEEEECC
T ss_pred EEEEEc-CCCHHHHHHHHHHHHCCCEEEEEEecccccccccC----------CCceEEecccccccHhhcccCCEEEECC
Confidence 577777 4566666555543 235689999988765543211 478899999887532 113579999877
Q ss_pred cccCcc----cHHHHHHHHhcccCC-CcEEEEE
Q 027517 115 GLRNVV----DKRKALEESFRVLKP-GSRISVL 142 (222)
Q Consensus 115 ~l~~~~----~~~~~l~~~~~~l~~-gG~l~i~ 142 (222)
...+.+ ......+.+.+.++. |+++++.
T Consensus 71 g~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 71 SVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp CCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred ccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 654221 122334455555544 4566554
No 484
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=78.58 E-value=6.6 Score=28.18 Aligned_cols=78 Identities=10% Similarity=-0.019 Sum_probs=50.3
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-----C-----
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F----- 102 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~----- 102 (222)
.++++|-.|++. .....+++.+ ..+.+|+.+|.+++.++...+.+...+ .++.++..|+.+.. +
T Consensus 8 ~~k~vlITGas~-giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T 3qiv_A 8 ENKVGIVTGSGG-GIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG----GTAISVAVDVSDPESAKAMADRTLA 82 (253)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC----CcEEEEEccCCCHHHHHHHHHHHHH
Confidence 356788888654 4444443333 235689999999888777665553322 46888899998742 0
Q ss_pred CCCceeEEEEcccc
Q 027517 103 SDCFFDAITMGYGL 116 (222)
Q Consensus 103 ~~~~~D~v~~~~~l 116 (222)
..+..|+++.+...
T Consensus 83 ~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 83 EFGGIDYLVNNAAI 96 (253)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 01258999987765
No 485
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=78.55 E-value=22 Score=27.80 Aligned_cols=82 Identities=17% Similarity=0.051 Sum_probs=47.7
Q ss_pred CCeEEEecCCCChhHHHHHHHhCC-CCcEEEEeCChh---HHHHHhcchhhh-----hhhcCCCeeEEeCCCCCcC-C-C
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQVGS-QGKVIGLDFSKN---QLSMASSRQDLV-----SKACYKNIEWVEGDALDLP-F-S 103 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~~~~-~~~~~~~D~~~~---~~~~~~~~~~~~-----~~~~~~~i~~~~~d~~~~~-~-~ 103 (222)
.++||=.| |+|.....+++.+.. +.+|++++-++. ..+...+.+... ......++.++.+|+.+.+ . .
T Consensus 69 ~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~ 147 (427)
T 4f6c_A 69 LGNTLLTG-ATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVVL 147 (427)
T ss_dssp CEEEEEEC-TTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCCC
T ss_pred CCEEEEec-CCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCCC
Confidence 45788777 677787777776632 447899987776 333332222111 0001158899999987732 1 2
Q ss_pred CCceeEEEEccccc
Q 027517 104 DCFFDAITMGYGLR 117 (222)
Q Consensus 104 ~~~~D~v~~~~~l~ 117 (222)
...+|+|+.+....
T Consensus 148 ~~~~d~Vih~A~~~ 161 (427)
T 4f6c_A 148 PENMDTIIHAGART 161 (427)
T ss_dssp SSCCSEEEECCCCC
T ss_pred cCCCCEEEECCccc
Confidence 35689999776544
No 486
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=78.44 E-value=5.4 Score=28.80 Aligned_cols=79 Identities=10% Similarity=0.046 Sum_probs=50.8
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC-----CC----
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----FS---- 103 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~---- 103 (222)
.++++|=.|++.| ....+++.+ ..+.+|+.++.+++.++...+.+...+ .++.++..|+.+.. ..
T Consensus 6 ~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (252)
T 3h7a_A 6 RNATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG----GRIVARSLDARNEDEVTAFLNAADA 80 (252)
T ss_dssp CSCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT----CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----CeEEEEECcCCCHHHHHHHHHHHHh
Confidence 3567888886654 443333332 236689999999887776665554332 47889999998742 00
Q ss_pred CCceeEEEEccccc
Q 027517 104 DCFFDAITMGYGLR 117 (222)
Q Consensus 104 ~~~~D~v~~~~~l~ 117 (222)
.+..|+++.+....
T Consensus 81 ~g~id~lv~nAg~~ 94 (252)
T 3h7a_A 81 HAPLEVTIFNVGAN 94 (252)
T ss_dssp HSCEEEEEECCCCC
T ss_pred hCCceEEEECCCcC
Confidence 04689999877654
No 487
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=78.43 E-value=7.8 Score=28.84 Aligned_cols=79 Identities=14% Similarity=0.060 Sum_probs=51.7
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC-----C----
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF-----S---- 103 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-----~---- 103 (222)
.+++||-.|++.| ....+++.+ ..+.+|+.++.+++.++...+.+...+ .++.++..|+.+... .
T Consensus 30 ~gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (301)
T 3tjr_A 30 DGRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG----FDAHGVVCDVRHLDEMVRLADEAFR 104 (301)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC----CceEEEEccCCCHHHHHHHHHHHHH
Confidence 4567888886654 444443332 235689999999988777666554322 478899999987420 0
Q ss_pred -CCceeEEEEccccc
Q 027517 104 -DCFFDAITMGYGLR 117 (222)
Q Consensus 104 -~~~~D~v~~~~~l~ 117 (222)
.+..|+++.+....
T Consensus 105 ~~g~id~lvnnAg~~ 119 (301)
T 3tjr_A 105 LLGGVDVVFSNAGIV 119 (301)
T ss_dssp HHSSCSEEEECCCCC
T ss_pred hCCCCCEEEECCCcC
Confidence 13589999877654
No 488
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=78.37 E-value=8.9 Score=28.97 Aligned_cols=101 Identities=14% Similarity=0.093 Sum_probs=46.3
Q ss_pred CCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHH-HhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEE
Q 027517 35 GDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSM-ASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 112 (222)
Q Consensus 35 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~ 112 (222)
..+|.=+|+|. |......+...+...++..+|++++.++. +........ ...++.+...+... + ...|+|+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~--~~~~~~i~~~~~~a--~--~~aDvVii 80 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLP--FMGQMSLYAGDYSD--V--KDCDVIVV 80 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCC--CTTCEEEC--CGGG--G--TTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHH--hcCCeEEEECCHHH--h--CCCCEEEE
Confidence 45899999875 33333333331222389999998754432 111111000 00233333333222 2 23688887
Q ss_pred cccccCccc-------------HHHHHHHHhcccCCCcEEEEE
Q 027517 113 GYGLRNVVD-------------KRKALEESFRVLKPGSRISVL 142 (222)
Q Consensus 113 ~~~l~~~~~-------------~~~~l~~~~~~l~~gG~l~i~ 142 (222)
......-+. ...+.+.+.+. .|++++++.
T Consensus 81 ~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~ 122 (318)
T 1y6j_A 81 TAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVV 122 (318)
T ss_dssp CCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEEC
T ss_pred cCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEe
Confidence 665432221 13445555554 689988774
No 489
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=78.37 E-value=19 Score=26.94 Aligned_cols=99 Identities=13% Similarity=0.061 Sum_probs=47.3
Q ss_pred eEEEecCCCChh-HHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEEccc
Q 027517 37 NVLDVCCGSGDL-SFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYG 115 (222)
Q Consensus 37 ~vLdiG~G~G~~-~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~ 115 (222)
+|.=+|+|.-.. ....+...+...++..+|++++.++.....+..... ......+...|...+ ...|+|+....
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~-~~~~~~i~~~~~~a~----~~aDvVIi~~~ 76 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAP-VSHGTRVWHGGHSEL----ADAQVVILTAG 76 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCC-TTSCCEEEEECGGGG----TTCSEEEECC-
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhh-hcCCeEEEECCHHHh----CCCCEEEEcCC
Confidence 677889876333 333332312222899999998755432111111000 001233332332222 24688887653
Q ss_pred ccCcc-------------cHHHHHHHHhcccCCCcEEEE
Q 027517 116 LRNVV-------------DKRKALEESFRVLKPGSRISV 141 (222)
Q Consensus 116 l~~~~-------------~~~~~l~~~~~~l~~gG~l~i 141 (222)
....+ -...+.+.+.+. .|++++++
T Consensus 77 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~ 114 (304)
T 2v6b_A 77 ANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLV 114 (304)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHH-CSSSEEEE
T ss_pred CCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 22211 124555666665 68998766
No 490
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=78.18 E-value=3.7 Score=31.52 Aligned_cols=98 Identities=15% Similarity=0.149 Sum_probs=60.8
Q ss_pred hCCCCCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCC--C-c-CC-C
Q 027517 30 SGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL--D-L-PF-S 103 (222)
Q Consensus 30 ~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~--~-~-~~-~ 103 (222)
.+..++.+||-+|+|. |..+..+++.. .+.+|+++|.+++-++.+++.- .-.++...-. + + .. .
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~-~Ga~Vi~~~~~~~~~~~~~~lG---------a~~vi~~~~~~~~~v~~~~~ 251 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVM-TPATVIALDVKEEKLKLAERLG---------ADHVVDARRDPVKQVMELTR 251 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHH-CCCEEEEEESSHHHHHHHHHTT---------CSEEEETTSCHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHhC---------CCEEEeccchHHHHHHHHhC
Confidence 5677899999999864 56667777775 1458999999998888877531 1122221111 0 0 11 1
Q ss_pred CCceeEEEEcccccCcccHHH--HHHHHhcccCCCcEEEEEecC
Q 027517 104 DCFFDAITMGYGLRNVVDKRK--ALEESFRVLKPGSRISVLDFN 145 (222)
Q Consensus 104 ~~~~D~v~~~~~l~~~~~~~~--~l~~~~~~l~~gG~l~i~~~~ 145 (222)
...+|+|+-.-.- .. .+....+. ++|+++.....
T Consensus 252 g~g~Dvvid~~G~------~~~~~~~~~~~~--~~G~~v~~g~~ 287 (359)
T 1h2b_A 252 GRGVNVAMDFVGS------QATVDYTPYLLG--RMGRLIIVGYG 287 (359)
T ss_dssp TCCEEEEEESSCC------HHHHHHGGGGEE--EEEEEEECCCS
T ss_pred CCCCcEEEECCCC------chHHHHHHHhhc--CCCEEEEEeCC
Confidence 2369999864331 22 45556666 89998776543
No 491
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=77.95 E-value=5.1 Score=32.09 Aligned_cols=72 Identities=17% Similarity=0.035 Sum_probs=51.7
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC----CCCCcee
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----FSDCFFD 108 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D 108 (222)
.+..+|+-+|+|. ....+++.+....++..+|.+++-.+...+.+ ++..++++|..+.. ..-+..|
T Consensus 233 ~~~~~v~I~GgG~--ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l--------~~~~Vi~GD~td~~~L~ee~i~~~D 302 (461)
T 4g65_A 233 KPYRRIMIVGGGN--IGASLAKRLEQTYSVKLIERNLQRAEKLSEEL--------ENTIVFCGDAADQELLTEENIDQVD 302 (461)
T ss_dssp SCCCEEEEECCSH--HHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC--------TTSEEEESCTTCHHHHHHTTGGGCS
T ss_pred ccccEEEEEcchH--HHHHHHHHhhhcCceEEEecCHHHHHHHHHHC--------CCceEEeccccchhhHhhcCchhhc
Confidence 3456888887654 55566666666778999999997776665554 58899999998843 1224689
Q ss_pred EEEEcc
Q 027517 109 AITMGY 114 (222)
Q Consensus 109 ~v~~~~ 114 (222)
++++..
T Consensus 303 ~~ia~T 308 (461)
T 4g65_A 303 VFIALT 308 (461)
T ss_dssp EEEECC
T ss_pred EEEEcc
Confidence 999844
No 492
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=77.61 E-value=9 Score=27.39 Aligned_cols=77 Identities=14% Similarity=0.089 Sum_probs=48.4
Q ss_pred CCCCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcC------CCCC
Q 027517 33 KTGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP------FSDC 105 (222)
Q Consensus 33 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~~~~ 105 (222)
.++++||=.|++. .....+++.+ ..+.+|+.++.+++.++...+... .++.+...|+.+.. ...+
T Consensus 12 ~~~k~vlVTGas~-gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~ 83 (249)
T 3f9i_A 12 LTGKTSLITGASS-GIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK-------DNYTIEVCNLANKEECSNLISKTS 83 (249)
T ss_dssp CTTCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-------SSEEEEECCTTSHHHHHHHHHTCS
T ss_pred CCCCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc-------cCccEEEcCCCCHHHHHHHHHhcC
Confidence 4567888888654 4444444333 235689999998887766554431 46788888887632 1124
Q ss_pred ceeEEEEccccc
Q 027517 106 FFDAITMGYGLR 117 (222)
Q Consensus 106 ~~D~v~~~~~l~ 117 (222)
..|+++.+....
T Consensus 84 ~id~li~~Ag~~ 95 (249)
T 3f9i_A 84 NLDILVCNAGIT 95 (249)
T ss_dssp CCSEEEECCC--
T ss_pred CCCEEEECCCCC
Confidence 689999876643
No 493
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=77.27 E-value=8.7 Score=30.11 Aligned_cols=38 Identities=16% Similarity=0.017 Sum_probs=27.7
Q ss_pred CCCCeEEEecCCC-ChhHHHHHHHhCCCC-cEEEEeCChhHH
Q 027517 33 KTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQL 72 (222)
Q Consensus 33 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~~~~~D~~~~~~ 72 (222)
.++.+|+=+|+|. |......+... +. +|+++|.+++-.
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~--G~~~V~v~~r~~~ra 204 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDR--GVRAVLVANRTYERA 204 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHH--CCSEEEEECSSHHHH
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHC--CCCEEEEEeCCHHHH
Confidence 4688999999975 55555555554 44 899999987654
No 494
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=76.86 E-value=8.5 Score=35.26 Aligned_cols=74 Identities=14% Similarity=0.056 Sum_probs=50.1
Q ss_pred CCeEEEecCCCChhHHHHHHHhCCCC--cEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc------------
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQVGSQG--KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL------------ 100 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~------------ 100 (222)
..+++|+-||.|.++.-+... +. .+.++|+++.+.+.-+.+. +...++..|+.++
T Consensus 851 ~l~viDLFsG~GGlslGfe~A---G~~~vv~avEid~~A~~ty~~N~--------p~~~~~~~DI~~l~~~~~~gdi~~~ 919 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQA---GISETLWAIEMWDPAAQAFRLNN--------PGTTVFTEDCNVLLKLVMAGEVTNS 919 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHT---TSEEEEEEECCSHHHHHHHHHHC--------TTSEEECSCHHHHHHHHTTTCSBCS
T ss_pred CceEEecccCccHHHHHHHHC---CCCceEEEEECCHHHHHHHHHhC--------CCCcEeeccHHHHhHhhhccchhhh
Confidence 458999999999999988754 43 4789999999888766654 3444555443211
Q ss_pred ---CCC-CCceeEEEEcccccCc
Q 027517 101 ---PFS-DCFFDAITMGYGLRNV 119 (222)
Q Consensus 101 ---~~~-~~~~D~v~~~~~l~~~ 119 (222)
..+ .+.+|+++.......+
T Consensus 920 ~~~~lp~~~~vDvl~GGpPCQ~F 942 (1330)
T 3av4_A 920 LGQRLPQKGDVEMLCGGPPCQGF 942 (1330)
T ss_dssp SCCBCCCTTTCSEEEECCCCTTT
T ss_pred hhhhccccCccceEEecCCCccc
Confidence 111 2468999976655544
No 495
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=76.78 E-value=6.9 Score=28.36 Aligned_cols=78 Identities=9% Similarity=0.035 Sum_probs=51.0
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCC----------
Q 027517 34 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF---------- 102 (222)
Q Consensus 34 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---------- 102 (222)
.+++||-.|++ |.....+++.+ ..+.+|+.++.+++.++...+.+...+ .++.++..|+.+...
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~ 102 (262)
T 3rkr_A 28 SGQVAVVTGAS-RGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG----GEAESHACDLSHSDAIAAFATGVLA 102 (262)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC----CceeEEEecCCCHHHHHHHHHHHHH
Confidence 45678888855 44554444433 246689999999887777665554332 468889999887420
Q ss_pred CCCceeEEEEcccc
Q 027517 103 SDCFFDAITMGYGL 116 (222)
Q Consensus 103 ~~~~~D~v~~~~~l 116 (222)
..++.|+++.+...
T Consensus 103 ~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 103 AHGRCDVLVNNAGV 116 (262)
T ss_dssp HHSCCSEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 01358999987665
No 496
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=76.23 E-value=11 Score=28.50 Aligned_cols=97 Identities=18% Similarity=0.061 Sum_probs=55.3
Q ss_pred CeEEEecCCC-Ch-hHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhh----hhc-----------CCCeeEEeCCCC
Q 027517 36 DNVLDVCCGS-GD-LSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVS----KAC-----------YKNIEWVEGDAL 98 (222)
Q Consensus 36 ~~vLdiG~G~-G~-~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~----~~~-----------~~~i~~~~~d~~ 98 (222)
.+|--||+|. |. .+..+++ .+.+|+++|.+++.++.+.++....- ..+ ..++.+. .|..
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~---~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~ 82 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFAS---GGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLA 82 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHH
Confidence 5788899986 32 3344443 35689999999999888765422110 000 0123332 2322
Q ss_pred CcCCCCCceeEEEEcccccCcccHHHHHHHHhcccCCCcEEE
Q 027517 99 DLPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRIS 140 (222)
Q Consensus 99 ~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~l~~gG~l~ 140 (222)
+. -...|+|+..-. ....-...+++++...++|+..++
T Consensus 83 ea---v~~aDlVieavp-e~~~~k~~v~~~l~~~~~~~~Ii~ 120 (319)
T 2dpo_A 83 EA---VEGVVHIQECVP-ENLDLKRKIFAQLDSIVDDRVVLS 120 (319)
T ss_dssp HH---TTTEEEEEECCC-SCHHHHHHHHHHHHTTCCSSSEEE
T ss_pred HH---HhcCCEEEEecc-CCHHHHHHHHHHHHhhCCCCeEEE
Confidence 21 134798887442 111123567888988998877554
No 497
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=75.99 E-value=14 Score=26.33 Aligned_cols=73 Identities=11% Similarity=0.121 Sum_probs=46.4
Q ss_pred CCeEEEecCCCChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCc---C------CCCC
Q 027517 35 GDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL---P------FSDC 105 (222)
Q Consensus 35 ~~~vLdiG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~---~------~~~~ 105 (222)
++++|=.| |+|.....+++.+..+..++.++.+++.++...+. .++.++..|+.+. . ...+
T Consensus 5 ~k~vlITG-as~gIG~~~a~~l~~g~~v~~~~r~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (245)
T 3e9n_A 5 KKIAVVTG-ATGGMGIEIVKDLSRDHIVYALGRNPEHLAALAEI---------EGVEPIESDIVKEVLEEGGVDKLKNLD 74 (245)
T ss_dssp -CEEEEES-TTSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHTS---------TTEEEEECCHHHHHHTSSSCGGGTTCS
T ss_pred CCEEEEEc-CCCHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhh---------cCCcceecccchHHHHHHHHHHHHhcC
Confidence 45677777 45667777777766677899999988776655442 3677787776542 1 0113
Q ss_pred ceeEEEEccccc
Q 027517 106 FFDAITMGYGLR 117 (222)
Q Consensus 106 ~~D~v~~~~~l~ 117 (222)
..|+++.+....
T Consensus 75 ~id~lv~~Ag~~ 86 (245)
T 3e9n_A 75 HVDTLVHAAAVA 86 (245)
T ss_dssp CCSEEEECC---
T ss_pred CCCEEEECCCcC
Confidence 689999876654
No 498
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=75.97 E-value=4.8 Score=31.64 Aligned_cols=44 Identities=11% Similarity=0.036 Sum_probs=32.5
Q ss_pred CeEEEecCCCChhHHHHHHHhCCCCc----EEEEeCChhHHHHHhcch
Q 027517 36 DNVLDVCCGSGDLSFLLSEQVGSQGK----VIGLDFSKNQLSMASSRQ 79 (222)
Q Consensus 36 ~~vLdiG~G~G~~~~~l~~~~~~~~~----~~~~D~~~~~~~~~~~~~ 79 (222)
.+|+|+-||.|.....+.+.-.+-.. +.++|+++.+.+.-+.+.
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~ 58 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIH 58 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHH
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHc
Confidence 48999999999999888765100012 778999998887766554
No 499
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=75.88 E-value=10 Score=28.46 Aligned_cols=98 Identities=14% Similarity=-0.016 Sum_probs=48.6
Q ss_pred CeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHHhcchhhhhhhcCCCeeEEeCCCCCcCCCCCceeEEEEcc
Q 027517 36 DNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGY 114 (222)
Q Consensus 36 ~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~ 114 (222)
.+|.=+|+|. |......+.. .+.+|+.++-++ .+..++.-..... ......+....+...+.....+|+|+..-
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~--~g~~V~~~~r~~--~~~i~~~g~~~~~-~~g~~~~~~~~~~~~~~~~~~~D~vilav 77 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQR--SGEDVHFLLRRD--YEAIAGNGLKVFS-INGDFTLPHVKGYRAPEEIGPMDLVLVGL 77 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHH--TSCCEEEECSTT--HHHHHHTCEEEEE-TTCCEEESCCCEESCHHHHCCCSEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHH--CCCeEEEEEcCc--HHHHHhCCCEEEc-CCCeEEEeeceeecCHHHcCCCCEEEEec
Confidence 4688899987 3333333333 245899999875 3443322100000 00111110000101000013589998865
Q ss_pred cccCcccHHHHHHHHhcccCCCcEEEE
Q 027517 115 GLRNVVDKRKALEESFRVLKPGSRISV 141 (222)
Q Consensus 115 ~l~~~~~~~~~l~~~~~~l~~gG~l~i 141 (222)
--... ..+++.+...++++..++.
T Consensus 78 k~~~~---~~~l~~l~~~l~~~~~iv~ 101 (312)
T 3hn2_A 78 KTFAN---SRYEELIRPLVEEGTQILT 101 (312)
T ss_dssp CGGGG---GGHHHHHGGGCCTTCEEEE
T ss_pred CCCCc---HHHHHHHHhhcCCCCEEEE
Confidence 44433 4578888889988876544
No 500
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=75.41 E-value=7.1 Score=31.03 Aligned_cols=41 Identities=12% Similarity=0.041 Sum_probs=29.7
Q ss_pred CCCCeEEEecCCC-ChhHHHHHHHhCCCCcEEEEeCChhHHHHH
Q 027517 33 KTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMA 75 (222)
Q Consensus 33 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~ 75 (222)
-.+++|.=+|.|. |......++.+ +.+|+++|.++.....+
T Consensus 209 L~GktVgIiG~G~IG~~vA~~Lka~--Ga~Viv~D~~p~~a~~A 250 (436)
T 3h9u_A 209 IAGKTACVCGYGDVGKGCAAALRGF--GARVVVTEVDPINALQA 250 (436)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHH
T ss_pred ccCCEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCChhhhHHH
Confidence 3578999999886 65556666664 56999999988654433
Done!