BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027518
(222 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FKT4|QKIL2_ARATH KH domain-containing protein At5g56140 OS=Arabidopsis thaliana
GN=At5g56140 PE=2 SV=1
Length = 315
Score = 274 bits (701), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 144/197 (73%), Positives = 159/197 (80%), Gaps = 7/197 (3%)
Query: 8 RFMAYSLS----PSAPHSPHLPS-LRSASSAILDQEKYLSELLAERHKLNPFLPVLPNAY 62
RFM YS S PSAP SP+ LRS SS ++QEKYLSELLAERHKL PFLPVLP+A+
Sbjct: 28 RFMTYSSSLSVPPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAF 87
Query: 63 RLLNQEIMRVTTLLGNASVLGQSGLEHASPLTSGGIFSNGGADTNGLASRFQSEISGLMQ 122
RLLNQEI+RVTTLL NA+VL QSGL+H SPL SGGIF N AD NG AS+F SE S +
Sbjct: 88 RLLNQEILRVTTLLENATVLSQSGLDHPSPLASGGIFQNARADMNGWASQFPSERS--VP 145
Query: 123 SSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRV 182
SS NWL+S GSSSGLI KRTIRVDIPV+ YPNFNFVGRLLGPRGNSLKRVEAST+CRV
Sbjct: 146 SSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRV 205
Query: 183 LIRGRGSIKDPARVIVM 199
LIRGRGSIKDP + +M
Sbjct: 206 LIRGRGSIKDPIKEEMM 222
>sp|Q0WLR1|QKIL1_ARATH KH domain-containing protein At4g26480 OS=Arabidopsis thaliana
GN=At4g26480 PE=2 SV=1
Length = 308
Score = 259 bits (661), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/197 (70%), Positives = 156/197 (79%), Gaps = 9/197 (4%)
Query: 8 RFMAY----SLSPSAPHSPHLPS-LRSASSAILDQEKYLSELLAERHKLNPFLPVLPNAY 62
RF+ Y S+ PSAP SP+ LRS S +++QEKYLSELLAERHKL PFLPVLP+
Sbjct: 24 RFVTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHVC 83
Query: 63 RLLNQEIMRVTTLLGNASVLGQSGLEHASPLTSGGIFSNGGADTNGLASRFQSEISGLMQ 122
RL+NQEI+RVTTLL NA L QS +H SPL SGGIF N AD NG AS+F SE S +
Sbjct: 84 RLMNQEILRVTTLLENA--LSQSRFDHPSPLASGGIFQNSRADMNGWASQFPSERS--VS 139
Query: 123 SSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRV 182
SS A NWL+S GSSSGLIVKRTIRVDIPV+KYPN+NFVGRLLGPRGNSLKRVEAST+CRV
Sbjct: 140 SSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRV 199
Query: 183 LIRGRGSIKDPARVIVM 199
LIRGRGSIKDP + +M
Sbjct: 200 LIRGRGSIKDPIKEDMM 216
>sp|Q9ZVI3|QKIL3_ARATH KH domain-containing protein At2g38610 OS=Arabidopsis thaliana
GN=At2g38610 PE=1 SV=1
Length = 286
Score = 155 bits (393), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 113/188 (60%), Gaps = 16/188 (8%)
Query: 14 LSPSAPHSPHLPSLRSASSAILDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVT 73
SP+ SP + S+ +D +YL+ELLAE KL PF+ VLP RLLNQE+ RV+
Sbjct: 11 FSPARAASPQI-----RSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQEMFRVS 65
Query: 74 TLLGNASVLGQSGLEH--ASPLTSGGIFSN----GGADTNGLASRFQSEISGLMQSSSAQ 127
++ N L H SP+ S + SN G NGL+ S G+
Sbjct: 66 GMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSGTPGM-----TM 120
Query: 128 NWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGR 187
+W + GS S VKR +R++IPV+ YPNFNFVGRLLGPRGNSLKRVEA+T CRV IRG+
Sbjct: 121 DWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGK 180
Query: 188 GSIKDPAR 195
GSIKDP +
Sbjct: 181 GSIKDPEK 188
>sp|Q8GWR3|QKIL5_ARATH KH domain-containing protein At1g09660 OS=Arabidopsis thaliana
GN=At1g09660 PE=2 SV=1
Length = 298
Score = 153 bits (387), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 112/194 (57%), Gaps = 23/194 (11%)
Query: 7 GRFMAYSLS---PSAPHSPHLPSLRSASSAILDQEKYLSELLAERHKLNPFLPVLPNAYR 63
G F Y LS S SP PS D+E+YL+ELL ER KL PFL V+PN R
Sbjct: 18 GSFFQYPLSGFRASPNRSPCPPS---------DRERYLTELLQERQKLGPFLQVMPNCCR 68
Query: 64 LLNQEIMRVTTLLGNASVLGQSGLEHASPLTSGGIFSNGGADTNGLASRFQSEISGLMQS 123
LLN EI RV+ S EH SP S G +NG D G + E L ++
Sbjct: 69 LLNHEIRRVS------SFPDLDRYEHGSPFRSLGQPTNGKLDLEGWSMMQAEENCHLQRA 122
Query: 124 S-----SAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEAST 178
S S W+ G + IVK+ IR+D+PV+KYP++NFVGR+LGPRGNSLKRVE +T
Sbjct: 123 SPFRGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELAT 182
Query: 179 ECRVLIRGRGSIKD 192
CRV IRGRGS+KD
Sbjct: 183 HCRVFIRGRGSVKD 196
>sp|Q8GYR4|QKIL4_ARATH KH domain-containing protein At3g08620 OS=Arabidopsis thaliana
GN=At3g08620 PE=2 SV=1
Length = 283
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 112/191 (58%), Gaps = 8/191 (4%)
Query: 7 GRFMAYSLSPSAPHSPHLPSLRSASSAILDQEKYLSELLAERHKLNPFLPVLPNAYRLLN 66
G + + SPS SP + R+ SS + Q Y+S+LLAE KL PF+ VLP RLLN
Sbjct: 3 GLYNYNNFSPSRAASPQI---RTPSSDVDSQ--YISQLLAEHQKLGPFMQVLPICSRLLN 57
Query: 67 QEIMRVTTLLGNASVLGQSGLEH--ASPLTSGGIFSNGGADTNGLASRFQSEISGLMQSS 124
QEI R+T ++ N L H SP+ S + SN G + E G
Sbjct: 58 QEIFRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIG-GPHG 116
Query: 125 SAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLI 184
A W + S S VKR +R+D+PV+ YPNFNFVGRLLGPRGNSLKRVEA+T CRV I
Sbjct: 117 MAMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYI 176
Query: 185 RGRGSIKDPAR 195
RG+GSIKDP +
Sbjct: 177 RGKGSIKDPEK 187
>sp|Q75GR5|SPIN1_ORYSJ KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica
GN=SPIN1 PE=1 SV=1
Length = 281
Score = 138 bits (348), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 110/177 (62%), Gaps = 13/177 (7%)
Query: 25 PSLRSASSAILDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNASVLG- 83
P +RS + + Q YL+ELLAE KL PF+ VLP +LL+QEIMRV++++ N
Sbjct: 17 PQIRSNPTDVDSQ--YLAELLAEHQKLGPFMQVLPICSKLLSQEIMRVSSIVHNHGFGDF 74
Query: 84 -----QSGLEHASPLTSGGIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSG 138
+S +SP NG + NGL E G Q +S +W + S S
Sbjct: 75 DRHRFRSPSPMSSPNPRSNRSGNGFSPWNGL----HQERLGFPQGTSM-DWQGAPPSPSS 129
Query: 139 LIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAR 195
+VK+ +R+D+PV+ YPNFNFVGR+LGPRGNSLKRVEAST CRV IRG+GSIKDP +
Sbjct: 130 HVVKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDPGK 186
>sp|Q32NN2|QKIA_XENLA Protein quaking-A OS=Xenopus laevis GN=qki-a PE=1 SV=2
Length = 341
Score = 77.8 bits (190), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 97 GIFSNGGADTNGLASRFQSEI-SGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYP 155
GIF++ + SR + ++ + M SSS + S G IV+ ++ +PV++YP
Sbjct: 36 GIFTHLERLLDEEISRVRKDMYNDTMNSSSNEKRTSELPDGIGPIVQLQEKLYVPVKEYP 95
Query: 156 NFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
+FNFVGR+LGPRG + K++EA T C++++RG+GS++D
Sbjct: 96 DFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRD 132
>sp|Q0VFL3|KHDR2_XENTR KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Xenopus tropicalis GN=khdrbs2 PE=2 SV=1
Length = 345
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 77/158 (48%), Gaps = 49/158 (31%)
Query: 35 LDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASPLT 94
+++EKYL EL+AE+ L+P +A RLL++EI++ GN + L+
Sbjct: 1 MEEEKYLPELMAEKDSLDP---SFVHAMRLLDEEIVKFQDSEGNKEDGEKKYLD------ 51
Query: 95 SGGIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKY 154
I SN +K + RV IPV++Y
Sbjct: 52 ---IISNKN-------------------------------------IKLSERVLIPVKQY 71
Query: 155 PNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
P FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D
Sbjct: 72 PKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRD 109
>sp|O01367|HOW_DROME Protein held out wings OS=Drosophila melanogaster GN=how PE=1 SV=1
Length = 405
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 44/156 (28%)
Query: 40 YLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASPLTSGGIF 99
YL++LL +R +L F V + RLL++EI RV AS+ +G++ PLT
Sbjct: 78 YLAQLLKDRKQLAAFPNVFTHVERLLDEEIARV-----RASLFQINGVKK-EPLTLP--- 128
Query: 100 SNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNF 159
G +V +V +PV ++P+FNF
Sbjct: 129 -----------------------------------EPEGSVVTMNEKVYVPVREHPDFNF 153
Query: 160 VGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAR 195
VGR+LGPRG + K++E T C++++RG+GS++D +
Sbjct: 154 VGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKK 189
>sp|Q5VWX1|KHDR2_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Homo sapiens GN=KHDRBS2 PE=1 SV=1
Length = 349
Score = 74.3 bits (181), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 79/162 (48%), Gaps = 51/162 (31%)
Query: 35 LDQEKYLSELLAERHKLNP-FLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASPL 93
+++EKYL EL+AE+ L+P F+ +A RLL +EI +
Sbjct: 1 MEEEKYLPELMAEKDSLDPSFV----HASRLLAEEIEKF--------------------- 35
Query: 94 TSGGIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEK 153
G + + E + S +N +K + RV IPV++
Sbjct: 36 -------------QGSDGKKEDEEKKYLDVISNKN------------IKLSERVLIPVKQ 70
Query: 154 YPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAR 195
YP FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+
Sbjct: 71 YPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAK 112
>sp|Q920F3|KHDR2_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Rattus norvegicus GN=Khdrbs2 PE=1 SV=1
Length = 349
Score = 73.9 bits (180), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 77/160 (48%), Gaps = 51/160 (31%)
Query: 37 QEKYLSELLAERHKLNP-FLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASPLTS 95
+EKYL EL+AE+ L+P F+ +A RLL +EI +
Sbjct: 3 EEKYLPELMAEKDSLDPSFV----HASRLLAEEIEKF----------------------- 35
Query: 96 GGIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYP 155
G R + E + S +N +K + RV IPV++YP
Sbjct: 36 -----------QGSDGRKEDEEKKYLDVISNKN------------IKLSERVLIPVKQYP 72
Query: 156 NFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAR 195
FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+
Sbjct: 73 KFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAK 112
>sp|Q5W9D5|QKI_PIG Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1
Length = 341
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 62/96 (64%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
FNFVGR+LGPRG + K++EA T C++++RG+GS++D
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRD 131
>sp|Q9QYS9|QKI_MOUSE Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1
Length = 341
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 62/96 (64%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
FNFVGR+LGPRG + K++EA T C++++RG+GS++D
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRD 131
>sp|Q96PU8|QKI_HUMAN Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1
Length = 341
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 62/96 (64%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
FNFVGR+LGPRG + K++EA T C++++RG+GS++D
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRD 131
>sp|Q5W9D6|QKI_HORSE Protein quaking OS=Equus caballus GN=QKI PE=2 SV=1
Length = 341
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 62/96 (64%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
FNFVGR+LGPRG + K++EA T C++++RG+GS++D
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRD 131
>sp|Q7JJZ8|QKI_FELCA Protein quaking OS=Felis catus GN=QKI PE=2 SV=1
Length = 341
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 62/96 (64%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
FNFVGR+LGPRG + K++EA T C++++RG+GS++D
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRD 131
>sp|Q9YH18|QKI_CHICK Protein quaking OS=Gallus gallus GN=QKI PE=2 SV=2
Length = 340
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 62/96 (64%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
FNFVGR+LGPRG + K++EA T C++++RG+GS++D
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRD 131
>sp|Q9GMY1|QKI_CANFA Protein quaking OS=Canis familiaris GN=QKI PE=2 SV=1
Length = 341
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 62/96 (64%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
FNFVGR+LGPRG + K++EA T C++++RG+GS++D
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRD 131
>sp|Q5W9D7|QKI_BOVIN Protein quaking OS=Bos taurus GN=QKI PE=2 SV=1
Length = 341
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 62/96 (64%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
FNFVGR+LGPRG + K++EA T C++++RG+GS++D
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRD 131
>sp|Q91XU1|QKI_RAT Protein quaking OS=Rattus norvegicus GN=Qki PE=1 SV=2
Length = 341
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 62/96 (64%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
FNFVGR+LGPRG + K++EA T C++++RG+GS++D
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRD 131
>sp|Q6IRN2|QKIB_XENLA Protein quaking-B OS=Xenopus laevis GN=qki-b PE=1 SV=1
Length = 342
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 46/55 (83%)
Query: 138 GLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
G IV+ ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D
Sbjct: 78 GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRD 132
>sp|Q6P104|QKIB_DANRE Protein quaking-B OS=Danio rerio GN=qkib PE=2 SV=1
Length = 319
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 59/96 (61%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + R + ++ + S S + G I + ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEIGRVRKDMYNDTLNGSTDKRTSELPDAVGPIAQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
FNFVGR+LGPRG + K++EA T C++++RG+GS++D
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRD 131
>sp|Q08BJ2|KHDR2_DANRE KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Danio rerio GN=khdrbs2 PE=2 SV=1
Length = 346
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 51/162 (31%)
Query: 35 LDQEKYLSELLAERHKLNP-FLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASPL 93
+DQ+KYL EL+AE+ L+ F+ +A RLL +EI +
Sbjct: 1 MDQDKYLPELVAEKESLDASFV----HAMRLLAEEIEKF--------------------- 35
Query: 94 TSGGIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEK 153
G R E+ + S +N +K + RV IPV++
Sbjct: 36 -------------EGDELRKDGEVKKYLDIISNKN------------IKLSERVLIPVQQ 70
Query: 154 YPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAR 195
YP FNFVG+LLGPRGNS+KR++ T ++ I G+GS++D +
Sbjct: 71 YPKFNFVGKLLGPRGNSMKRLQEETGAKMSILGKGSMRDKGK 112
>sp|Q17339|GLD1_CAEEL Female germline-specific tumor suppressor gld-1 OS=Caenorhabditis
elegans GN=gld-1 PE=1 SV=1
Length = 463
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 47/157 (29%)
Query: 39 KYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASPLTSGGI 98
+YL++L+ E+ L F + N RLL+ EI RV L
Sbjct: 148 EYLADLVKEKKHLTLFPHMFSNVERLLDDEIGRVRVAL---------------------- 185
Query: 99 FSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFN 158
FQ+E + A G ++ T ++ +P +YP++N
Sbjct: 186 --------------FQTEFPRVELPEPA-----------GDMISITEKIYVPKNEYPDYN 220
Query: 159 FVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAR 195
FVGR+LGPRG + K++E T C++++RG+GS++D ++
Sbjct: 221 FVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSK 257
>sp|Q9WU01|KHDR2_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Mus musculus GN=Khdrbs2 PE=1 SV=1
Length = 349
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 75/157 (47%), Gaps = 51/157 (32%)
Query: 37 QEKYLSELLAERHKLNP-FLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASPLTS 95
+EKYL EL+AE+ L+P F+ +A RLL +EI +
Sbjct: 3 EEKYLPELMAEKDSLDPSFV----HASRLLAEEIEKF----------------------- 35
Query: 96 GGIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYP 155
G + + E + S +N +K + RV IPV++YP
Sbjct: 36 -----------QGSDGKKEDEEKKYLDVISNKN------------IKLSERVLIPVKQYP 72
Query: 156 NFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D
Sbjct: 73 KFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRD 109
>sp|Q6P0D0|QKIA_DANRE Protein quaking-A OS=Danio rerio GN=qkia PE=2 SV=2
Length = 341
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 46/157 (29%)
Query: 40 YLSELLAERHKLNPFLPVLPNAY----RLLNQEIMRVTTLLGNASVLGQSGLEHASPLTS 95
YL +LL E+ KL LP L + RLL++EI RV + N SV
Sbjct: 17 YLMQLLNEK-KLMTSLPNLCGIFTHLERLLDEEINRVRKDMYNDSV-------------- 61
Query: 96 GGIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYP 155
NGL + E+ G IV ++ +PV++YP
Sbjct: 62 -----------NGLVDKHPLELP----------------EPVGPIVHLQEKLFVPVKEYP 94
Query: 156 NFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
++NFVGR+LGPRG + K++EA T C++++RGR S++D
Sbjct: 95 DYNFVGRILGPRGLTAKQLEAETGCKIMVRGRSSMRD 131
>sp|Q91V33|KHDR1_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Rattus norvegicus GN=Khdrbs1 PE=1 SV=1
Length = 443
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 61/202 (30%)
Query: 17 SAPHSPHLPSLRSASSAILDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLL 76
SAP +P LP +A++ + + KYL EL+AE+ L+P +A +LL+ EI ++
Sbjct: 81 SAP-TPLLPPSATAAAKMEPENKYLPELMAEKDSLDP---SFTHAMQLLSVEIEKIQ--- 133
Query: 77 GNASVLGQSGLEHASPLTSGGIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSS 136
G + +N+L
Sbjct: 134 -----------------------------------------KGESKKDDEENYLDLFSHK 152
Query: 137 SGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAR- 195
+ +K RV IPV++YP FNFVG++LGP+GN++KR++ T ++ + G+GS++D A+
Sbjct: 153 N---MKLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKE 209
Query: 196 ---------VIVMLLLSLFVFI 208
L + L VFI
Sbjct: 210 EELRKGGDPKYAHLNMDLHVFI 231
>sp|Q07666|KHDR1_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Homo sapiens GN=KHDRBS1 PE=1 SV=1
Length = 443
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 60/198 (30%)
Query: 21 SPHLPSLRSASSAILDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNAS 80
+P LP +AS + + KYL EL+AE+ L+P +A +LL EI ++
Sbjct: 84 TPLLPPSATASVKMEPENKYLPELMAEKDSLDP---SFTHAMQLLTAEIEKIQ------- 133
Query: 81 VLGQSGLEHASPLTSGGIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLI 140
G + +N+L +
Sbjct: 134 -------------------------------------KGDSKKDDEENYLDLFSHKN--- 153
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAR----- 195
+K RV IPV++YP FNFVG++LGP+GN++KR++ T ++ + G+GS++D A+
Sbjct: 154 MKLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELR 213
Query: 196 -----VIVMLLLSLFVFI 208
L + L VFI
Sbjct: 214 KGGDPKYAHLNMDLHVFI 231
>sp|Q60749|KHDR1_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Mus musculus GN=Khdrbs1 PE=1 SV=2
Length = 443
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 61/202 (30%)
Query: 17 SAPHSPHLPSLRSASSAILDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLL 76
SAP +P LP +A+ + + KYL EL+AE+ L+P +A +LL+ EI ++
Sbjct: 81 SAP-TPLLPPSATAAVKMEPENKYLPELMAEKDSLDP---SFTHAMQLLSVEIEKIQ--- 133
Query: 77 GNASVLGQSGLEHASPLTSGGIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSS 136
G + +N+L
Sbjct: 134 -----------------------------------------KGESKKDDEENYLDLFSHK 152
Query: 137 SGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAR- 195
+ +K RV IPV++YP FNFVG++LGP+GN++KR++ T ++ + G+GS++D A+
Sbjct: 153 N---MKLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKE 209
Query: 196 ---------VIVMLLLSLFVFI 208
L + L VFI
Sbjct: 210 EELRKGGDPKYAHLNMDLHVFI 231
>sp|Q9JLP1|KHDR3_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Rattus norvegicus GN=Khdrbs3 PE=1 SV=1
Length = 346
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 60/163 (36%)
Query: 37 QEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASPLTSG 96
+EKYL EL+AE+ L+ P +A RL+N+EI +
Sbjct: 2 EEKYLPELMAEKDSLD---PSFTHALRLVNREIEK------------------------- 33
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIR----VDIPVE 152
F G ++ + ++ +++ + ++ V IPV+
Sbjct: 34 --FQKG-------------------EAKDEEKYID-------VVINKNMKLGQKVLIPVK 65
Query: 153 KYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAR 195
++P FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+
Sbjct: 66 QFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAK 108
>sp|Q8UUW7|KHDR1_CHICK KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Gallus gallus GN=KHDRBS1 PE=2 SV=1
Length = 433
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 10/78 (12%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAR----- 195
+K RV IPV++YP FNFVG++LGP+GN++KR++ T ++ + G+GS++D A+
Sbjct: 137 MKLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELR 196
Query: 196 -----VIVMLLLSLFVFI 208
L + L VFI
Sbjct: 197 KGGDPKYAHLNMDLHVFI 214
>sp|Q9R226|KHDR3_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Mus musculus GN=Khdrbs3 PE=1 SV=1
Length = 346
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAR 195
+V IPV+++P FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+
Sbjct: 59 KVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAK 108
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 37 QEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMR 71
+EKYL EL+AE+ L+ P +A RL+N+EI +
Sbjct: 2 EEKYLPELMAEKDSLD---PSFTHALRLVNREIEK 33
>sp|O75525|KHDR3_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Homo sapiens GN=KHDRBS3 PE=1 SV=1
Length = 346
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAR 195
+V IPV+++P FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+
Sbjct: 59 KVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAK 108
Score = 33.9 bits (76), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 37 QEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMR 71
+EKYL EL+AE+ L+ P +A RL+NQEI +
Sbjct: 2 EEKYLPELMAEKDSLD---PSFTHALRLVNQEIEK 33
>sp|Q750X2|BBP_ASHGO Branchpoint-bridging protein OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=BBP PE=3 SV=2
Length = 507
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 36/44 (81%)
Query: 149 IPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
IP+ YP NFVG LLGPRGN+LK+++ + C+++IRGRGS+K+
Sbjct: 155 IPINDYPEINFVGLLLGPRGNTLKQLQQQSGCKIVIRGRGSVKE 198
>sp|Q12186|BBP_YEAST Branchpoint-bridging protein OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MSL5 PE=1 SV=1
Length = 476
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 37/44 (84%)
Query: 149 IPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
IPV++YP+ NFVG LLGPRG +L++++ + C++ IRGRGS+K+
Sbjct: 154 IPVDQYPDVNFVGLLLGPRGRTLRKLQEDSNCKIAIRGRGSVKE 197
>sp|Q6BSP4|BBP_DEBHA Branchpoint-bridging protein OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=BBP PE=3 SV=2
Length = 518
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
VK ++ IPV+ YP+ NFVG LLGPRGN+L++++ + R+ IRG+GS+KD
Sbjct: 160 VKTYEKIYIPVKDYPDINFVGLLLGPRGNTLRQLQEDSGARLAIRGKGSVKD 211
>sp|Q15637|SF01_HUMAN Splicing factor 1 OS=Homo sapiens GN=SF1 PE=1 SV=4
Length = 639
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
+V IP ++YP NFVG L+GPRGN+LK +E +++IRG+GS+K+
Sbjct: 139 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 185
>sp|Q6FW77|BBP_CANGA Branchpoint-bridging protein OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=BBP
PE=3 SV=1
Length = 465
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 35/44 (79%)
Query: 149 IPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
IPV +YP NFVG LLGPRG +L++++ + C++ IRGRGS+K+
Sbjct: 140 IPVSQYPQINFVGLLLGPRGKTLRKMQEDSGCKIAIRGRGSVKE 183
>sp|Q64213|SF01_MOUSE Splicing factor 1 OS=Mus musculus GN=Sf1 PE=1 SV=6
Length = 653
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
+V IP ++YP NFVG L+GPRGN+LK +E +++IRG+GS+K+
Sbjct: 139 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 185
>sp|Q5AED9|BBP_CANAL Branchpoint-bridging protein OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=BBP PE=3 SV=1
Length = 455
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 143 RTI-RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
RT+ R+ +PV+ YP+ NFVG L+GPRGN+LK+++ + R+ IRG+GS+K+
Sbjct: 147 RTVERLYVPVKDYPDINFVGFLIGPRGNTLKKLQEDSGARLQIRGKGSVKE 197
>sp|Q4WXV6|BBP_ASPFU Branchpoint-bridging protein OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=bbp PE=3
SV=1
Length = 566
Score = 60.5 bits (145), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
K +V +PV YP NF+G L+GPRGN+LK++EA + ++ IRG+GS+K+
Sbjct: 179 TKTQEKVYVPVNDYPEINFIGLLIGPRGNTLKKMEAESGAKIAIRGKGSVKE 230
>sp|Q6C187|BBP_YARLI Branchpoint-bridging protein OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=BBP PE=3 SV=1
Length = 605
Score = 60.5 bits (145), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 149 IPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPARVIVMLLLSLFVFI 208
IPV +YP+ NF+G+LLG RG +LK++E + ++ IRGRGS+K + S
Sbjct: 185 IPVNEYPDINFIGQLLGARGKTLKKMEQESGAKICIRGRGSVKQGKGRTDIPFQSTAEDD 244
Query: 209 VHILYVSGISNEI 221
+H L +S +I
Sbjct: 245 LHCLIISEDEEKI 257
>sp|Q54BM5|BBP_DICDI Branchpoint-bridging protein OS=Dictyostelium discoideum GN=sf1
PE=3 SV=1
Length = 501
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 142 KRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD--PARVIVM 199
K+T ++ IP++ +P +NF+G ++GPRGN+ KR+E + ++ IRG+GS +D P ++
Sbjct: 178 KKTRKIYIPIKNHPEYNFIGLIIGPRGNTQKRMEKESGAKIAIRGKGSSRDGKPTKLQFQ 237
Query: 200 LLLSLFVFIV 209
L V +
Sbjct: 238 ENDELHVLLT 247
>sp|O74555|BBP_SCHPO Branchpoint-bridging protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=bpb1 PE=1 SV=1
Length = 587
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 38/52 (73%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
K +V +PV+ YP NF+G L+GPRG++LK +EA + ++ IRG+GS+K+
Sbjct: 184 AKTQEKVYVPVKDYPEINFIGLLIGPRGHTLKDMEAKSGAKIAIRGKGSVKE 235
>sp|Q8NIW7|BBP_NEUCR Branchpoint-bridging protein OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=bpb-1 PE=3 SV=1
Length = 607
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
K +V +PV YP NF+G L+GPRGN+LK++E + ++ IRG+GS+K+
Sbjct: 194 TKTQEKVYVPVNDYPEINFIGLLIGPRGNTLKKMETESGAKIAIRGKGSVKE 245
>sp|P0CO44|BBP_CRYNJ Branchpoint-bridging protein OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=BBP PE=3 SV=1
Length = 546
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
+V IPV+++P NF G L+GPRGNSLK++E + ++ IRG+GS+K+
Sbjct: 249 KVYIPVKEFPEINFFGLLVGPRGNSLKKMERESGAKISIRGKGSVKE 295
>sp|P0CO45|BBP_CRYNB Branchpoint-bridging protein OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=BBP PE=3 SV=1
Length = 546
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
+V IPV+++P NF G L+GPRGNSLK++E + ++ IRG+GS+K+
Sbjct: 249 KVYIPVKEFPEINFFGLLVGPRGNSLKKMERESGAKISIRGKGSVKE 295
>sp|P13230|GRP33_ARTSA Glycine-rich protein GRP33 OS=Artemia salina PE=2 SV=1
Length = 308
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 39/52 (75%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD 192
VK R +PV+++P +NF+G+LLGP G+++K+++ T ++ I GRGS++D
Sbjct: 72 VKLVSRCCLPVDQFPKYNFLGKLLGPGGSTMKQLQDETMTKISILGRGSMRD 123
>sp|Q4P0H7|BBP_USTMA Branchpoint-bridging protein OS=Ustilago maydis (strain 521 / FGSC
9021) GN=BBP PE=3 SV=1
Length = 625
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 35/48 (72%)
Query: 144 TIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIK 191
T +V +P++++P F G L+GPRGN+LK +E + ++ IRG+GS+K
Sbjct: 249 TEKVYLPIKEFPEIKFFGLLVGPRGNTLKTMERQSGAKISIRGKGSVK 296
>sp|Q9NZI8|IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 OS=Homo sapiens
GN=IGF2BP1 PE=1 SV=2
Length = 577
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 8/57 (14%)
Query: 148 DIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD-----PARVIVM 199
++P++ + NFVGRL+G G +LK+VE TE ++ I S++D P R I +
Sbjct: 276 EVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITI---SSLQDLTLYNPERTITV 329
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,281,274
Number of Sequences: 539616
Number of extensions: 3151445
Number of successful extensions: 9813
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 9669
Number of HSP's gapped (non-prelim): 179
length of query: 222
length of database: 191,569,459
effective HSP length: 113
effective length of query: 109
effective length of database: 130,592,851
effective search space: 14234620759
effective search space used: 14234620759
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)