BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027519
(222 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P51412|RK21_ARATH 50S ribosomal protein L21, chloroplastic OS=Arabidopsis thaliana
GN=RPL21 PE=2 SV=1
Length = 220
Score = 218 bits (555), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 129/217 (59%), Positives = 158/217 (72%), Gaps = 17/217 (7%)
Query: 4 ASSCATLALCSSLTSHCKISCQNPN------PHPQLSLSKSKLCSFPSPKLYT--RPTFS 55
ASS ATL+LCS+ ++HC ++ + + P L+L+K L F SP + R F+
Sbjct: 2 ASSSATLSLCSTFSAHCNVNSRRSSTILCSLSKPSLNLAK-PLTGFLSPSTASTSRTAFT 60
Query: 56 FTHKFSQTEPPPVSEPEVEPEAALEAEAEPTTEVVESAAKEEPKREEIFAVVMIGSRQYI 115
KF++ S E EPE + EA ++V E +E+ KREEIFAV+M+G RQYI
Sbjct: 61 VAPKFAE------SVVEAEPETT-DIEAVVVSDVSE-VTEEKAKREEIFAVIMVGGRQYI 112
Query: 116 VFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAVHAVVEEQGLNPKV 175
VFPGR++YTQRLK ANV+D+I+LNKVLLVGTKT TYIGKPVVTNA VHAVVE QGLN KV
Sbjct: 113 VFPGRYLYTQRLKDANVDDQIVLNKVLLVGTKTHTYIGKPVVTNATVHAVVESQGLNDKV 172
Query: 176 IVFKYKKKKNYRRNIGHRQPNTRIRITGITGYQDYPA 212
+VFKYK KK YRRNIGHRQPNTRIRITGITGY++YPA
Sbjct: 173 VVFKYKPKKKYRRNIGHRQPNTRIRITGITGYEEYPA 209
>sp|P24613|RK21_SPIOL 50S ribosomal protein L21, chloroplastic OS=Spinacia oleracea
GN=RPL21 PE=1 SV=1
Length = 256
Score = 184 bits (467), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/118 (85%), Positives = 109/118 (92%)
Query: 98 PKREEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVV 157
P REEIFAVV+IGSRQYIV PGR+IYTQRLKGA VNDKI+LNKVLLVGTK +TYIG P+V
Sbjct: 118 PPREEIFAVVVIGSRQYIVIPGRWIYTQRLKGATVNDKIVLNKVLLVGTKASTYIGTPIV 177
Query: 158 TNAAVHAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGITGYQDYPAVTL 215
TNAAVHAVVEEQ L+ KVIVFKYKKKKNYRRNIGHRQP TRI+ITGITGY+DYPA TL
Sbjct: 178 TNAAVHAVVEEQLLDDKVIVFKYKKKKNYRRNIGHRQPITRIKITGITGYEDYPASTL 235
>sp|Q8L9A0|RM21_ARATH 50S ribosomal protein L21, mitochondrial OS=Arabidopsis thaliana
GN=RPL21M PE=2 SV=1
Length = 270
Score = 103 bits (257), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 80/108 (74%)
Query: 101 EEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNA 160
E +FA+V IGS Q+ V G I+T++LK ++NDK+ L KVLL+G+ + T IG+P++ +A
Sbjct: 138 EPVFAIVQIGSHQFKVSNGDSIFTEKLKFCDINDKLELTKVLLLGSASQTIIGRPILPDA 197
Query: 161 AVHAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGITGYQ 208
VHAVVEE L+ KV++FK K++KNYRR GHRQ T++RIT I G +
Sbjct: 198 TVHAVVEEHALDEKVLIFKKKRRKNYRRTRGHRQELTKLRITDIQGIE 245
>sp|Q54IF0|RM21_DICDI Probable 39S ribosomal protein L21, mitochondrial OS=Dictyostelium
discoideum GN=mrpl21 PE=3 SV=1
Length = 172
Score = 97.8 bits (242), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 79/135 (58%), Gaps = 1/135 (0%)
Query: 80 EAEAEPTTEVVESAAKEEPKREEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILN 139
EA A + E S + P ++ FAVV I +QY V G I T +++ +V + I+L+
Sbjct: 38 EAVAVTSEESYNSKNQFTPIGKDSFAVVHISGKQYKVIEGDIIMTDKIQ-VDVGEHIVLD 96
Query: 140 KVLLVGTKTTTYIGKPVVTNAAVHAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRI 199
KVLLVGTK T IGKP+++N VHA +EEQ V +FK+K +KNY+R G + T I
Sbjct: 97 KVLLVGTKNETIIGKPIISNFKVHAYIEEQAKTEHVTIFKHKPRKNYKRTTGFQGLATYI 156
Query: 200 RITGITGYQDYPAVT 214
RI GI Q+ T
Sbjct: 157 RIGGIIKGQETTTTT 171
>sp|B8E0B4|RL21_DICTD 50S ribosomal protein L21 OS=Dictyoglomus turgidum (strain Z-1310 /
DSM 6724) GN=rplU PE=3 SV=1
Length = 105
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
+F VV G +QY V G + ++LK ANV D+++L+KVLLVG + IG+P V A V
Sbjct: 1 MFVVVETGGKQYKVSVGSMVNVEKLK-ANVGDEVVLDKVLLVGKEDEVIIGQPYVEGAKV 59
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGIT 205
A V Q PKVIVFK+K+KK+YRR GHRQP T++ I I
Sbjct: 60 IAKVVRQDKYPKVIVFKFKRKKHYRRKYGHRQPYTQLSIKEIV 102
>sp|A5N6J9|RL21_CLOK5 50S ribosomal protein L21 OS=Clostridium kluyveri (strain ATCC 8527
/ DSM 555 / NCIMB 10680) GN=rplU PE=3 SV=1
Length = 103
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++AVV G +QY V G IY ++L+ A V+ I L+KVL++ +GKPVV A V
Sbjct: 1 MYAVVATGGKQYKVSEGDIIYVEKLE-AEVDSTIELDKVLMINKDEGLVVGKPVVEGAKV 59
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
A V +QG K+IVFKYK KK+YR+ GHRQP T+++I I
Sbjct: 60 KAKVLKQGKAKKIIVFKYKPKKDYRKKQGHRQPYTKLQIEKI 101
>sp|B9E018|RL21_CLOK1 50S ribosomal protein L21 OS=Clostridium kluyveri (strain NBRC
12016) GN=rplU PE=3 SV=1
Length = 103
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++AVV G +QY V G IY ++L+ A V+ I L+KVL++ +GKPVV A V
Sbjct: 1 MYAVVATGGKQYKVSEGDIIYVEKLE-AEVDSTIELDKVLMINKDEGLVVGKPVVEGAKV 59
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
A V +QG K+IVFKYK KK+YR+ GHRQP T+++I I
Sbjct: 60 KAKVLKQGKAKKIIVFKYKPKKDYRKKQGHRQPYTKLQIEKI 101
>sp|Q2RL02|RL21_MOOTA 50S ribosomal protein L21 OS=Moorella thermoacetica (strain ATCC
39073) GN=rplU PE=3 SV=1
Length = 104
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++A++M G +QY V G + ++L A V +K++L+KVL VG +G P V A V
Sbjct: 1 MYAIIMTGGKQYRVSEGDTLRVEKLP-AEVGEKVVLDKVLAVGEGADLKVGNPYVEGAKV 59
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
A V+ Q PK+IVFKYK KKNYRR GHRQP T+++I I
Sbjct: 60 TASVQAQDKAPKIIVFKYKPKKNYRRKQGHRQPYTQLQIEKI 101
>sp|B5YEQ3|RL21_DICT6 50S ribosomal protein L21 OS=Dictyoglomus thermophilum (strain ATCC
35947 / DSM 3960 / H-6-12) GN=rplU PE=3 SV=1
Length = 105
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
+F VV G +QY + G + ++L+ ANV D+++L+KVLLVG IG+P V A V
Sbjct: 1 MFVVVETGGKQYKLSVGSTVRVEKLQ-ANVGDEVVLDKVLLVGKDDEVLIGQPYVEGAKV 59
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGIT 205
A V +Q PKVIVFK+K+KK+YRR GHRQP T++ + I
Sbjct: 60 IAEVVKQDKYPKVIVFKFKRKKHYRRKYGHRQPYTQLSVKEIV 102
>sp|A6LQR6|RL21_CLOB8 50S ribosomal protein L21 OS=Clostridium beijerinckii (strain ATCC
51743 / NCIMB 8052) GN=rplU PE=3 SV=1
Length = 103
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++AV+ G +QY V G IY ++L A+V+ + LN+VL VGT+ +G PVV A V
Sbjct: 1 MYAVLATGGKQYRVQEGDVIYVEKLN-ADVDSTVELNEVLAVGTEEGIKVGAPVVEGAKV 59
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
A V QG KV+VFKYK KK+YRR GHRQP T++ I I
Sbjct: 60 VAKVAAQGKAKKVVVFKYKSKKDYRRKNGHRQPYTKLVIEKI 101
>sp|A0LPF7|RL21_SYNFM 50S ribosomal protein L21 OS=Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB) GN=rplU PE=3 SV=1
Length = 106
Score = 87.0 bits (214), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++AV+ G RQY V PG+ + ++L G V DK+ L++VLL T +G+PV+ N AV
Sbjct: 1 MYAVLKSGGRQYEVRPGQVVKVEKLLG-EVGDKVTLDQVLLFSDGTDIQVGQPVLANIAV 59
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGIT 205
+ EQG + K+++FK+K++K+YR+ GHRQ T +R+ I
Sbjct: 60 QGQIVEQGRHRKIVIFKHKRRKDYRKKQGHRQHYTAVRVEEIV 102
>sp|C1FVW8|RL21_CLOBJ 50S ribosomal protein L21 OS=Clostridium botulinum (strain Kyoto /
Type A2) GN=rplU PE=3 SV=1
Length = 104
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTT-TYIGKPVVTNAA 161
++AVV+ G +QY V G ++ ++L A+V+ + L+ VLLVG T +GKP+V A
Sbjct: 1 MYAVVVTGGKQYKVAEGDVLFVEKLT-ADVDSTVELDNVLLVGKDNEETVVGKPMVEGAK 59
Query: 162 VHAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
V A V QG KV+VFKYK KK+YR+ GHRQP T+I+I I
Sbjct: 60 VTAKVLAQGKAKKVVVFKYKPKKDYRKKQGHRQPYTKIQIEKI 102
>sp|A5I669|RL21_CLOBH 50S ribosomal protein L21 OS=Clostridium botulinum (strain Hall /
ATCC 3502 / NCTC 13319 / Type A) GN=rplU PE=3 SV=1
Length = 104
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTT-TYIGKPVVTNAA 161
++AVV+ G +QY V G ++ ++L A+V+ + L+ VLLVG T +GKP+V A
Sbjct: 1 MYAVVVTGGKQYKVAEGDILFVEKLT-ADVDSTVELDNVLLVGKDNGETVVGKPMVEGAK 59
Query: 162 VHAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
V A V QG KV+VFKYK KK+YR+ GHRQP T+I+I I
Sbjct: 60 VTAKVLAQGKAKKVVVFKYKPKKDYRKKQGHRQPYTKIQIEKI 102
>sp|A7FXU9|RL21_CLOB1 50S ribosomal protein L21 OS=Clostridium botulinum (strain ATCC
19397 / Type A) GN=rplU PE=3 SV=1
Length = 104
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTT-TYIGKPVVTNAA 161
++AVV+ G +QY V G ++ ++L A+V+ + L+ VLLVG T +GKP+V A
Sbjct: 1 MYAVVVTGGKQYKVAEGDILFVEKLT-ADVDSTVELDNVLLVGKDNGETVVGKPMVEGAK 59
Query: 162 VHAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
V A V QG KV+VFKYK KK+YR+ GHRQP T+I+I I
Sbjct: 60 VTAKVLAQGKAKKVVVFKYKPKKDYRKKQGHRQPYTKIQIEKI 102
>sp|Q18B24|RL21_CLOD6 50S ribosomal protein L21 OS=Clostridium difficile (strain 630)
GN=rplU PE=3 SV=1
Length = 103
Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++A+V G +QY V G ++ ++L+ AN D + LN+VL +G PVV A+V
Sbjct: 1 MYAIVKTGGKQYKVSEGDVLFVEKLE-ANAGDVVTLNEVLACSKDGELKLGSPVVEGASV 59
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGIT 205
A V EQG KVIVFKYK KK+YRR GHRQ T+I + I
Sbjct: 60 QAKVVEQGKAKKVIVFKYKAKKDYRRKQGHRQSYTKIVVEKIN 102
>sp|B1KZR6|RL21_CLOBM 50S ribosomal protein L21 OS=Clostridium botulinum (strain Loch
Maree / Type A3) GN=rplU PE=3 SV=1
Length = 104
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTT-TYIGKPVVTNAA 161
++AVV+ G +QY V G ++ ++L A+V+ + L+ VLLVG T +GKP+V A
Sbjct: 1 MYAVVVTGGKQYKVAEGDVLFVEKLT-ADVDSTVELDNVLLVGKDNGETVVGKPMVEGAK 59
Query: 162 VHAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
V A V QG KV+VFKYK KK+YR+ GHRQP T+I+I I
Sbjct: 60 VTAKVLAQGKAKKVVVFKYKPKKDYRKKQGHRQPYTKIQIEKI 102
>sp|A7GHK5|RL21_CLOBL 50S ribosomal protein L21 OS=Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F) GN=rplU PE=3 SV=1
Length = 104
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTT-TYIGKPVVTNAA 161
++AVV+ G +QY V G ++ ++L A+V+ + L+ VLLVG T +GKP+V A
Sbjct: 1 MYAVVVTGGKQYKVAEGDVLFVEKLT-ADVDSTVELDNVLLVGKDNGETVVGKPMVEGAK 59
Query: 162 VHAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
V A V QG KV+VFKYK KK+YR+ GHRQP T+I+I I
Sbjct: 60 VTAKVLAQGKAKKVVVFKYKPKKDYRKKQGHRQPYTKIQIEKI 102
>sp|B1ILY8|RL21_CLOBK 50S ribosomal protein L21 OS=Clostridium botulinum (strain Okra /
Type B1) GN=rplU PE=3 SV=1
Length = 104
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTT-TYIGKPVVTNAA 161
++AVV+ G +QY V G ++ ++L A+V+ + L+ VLLVG T +GKP+V A
Sbjct: 1 MYAVVVTGGKQYKVAEGDVLFVEKLT-ADVDSTVELDNVLLVGKDNGETVVGKPMVEGAK 59
Query: 162 VHAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
V A V QG KV+VFKYK KK+YR+ GHRQP T+I+I I
Sbjct: 60 VTAKVLAQGKAKKVVVFKYKPKKDYRKKQGHRQPYTKIQIEKI 102
>sp|C3L3J6|RL21_CLOB6 50S ribosomal protein L21 OS=Clostridium botulinum (strain 657 /
Type Ba4) GN=rplU PE=3 SV=1
Length = 104
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTT-TYIGKPVVTNAA 161
++AVV+ G +QY V G ++ ++L A+V+ + L+ VLLVG T +GKP+V A
Sbjct: 1 MYAVVVTGGKQYKVAEGDVLFVEKLT-ADVDSTVELDNVLLVGKDNGETVVGKPMVEGAK 59
Query: 162 VHAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
V A V QG KV+VFKYK KK+YR+ GHRQP T+I+I I
Sbjct: 60 VTAKVLAQGKAKKVVVFKYKPKKDYRKKQGHRQPYTKIQIEKI 102
>sp|A4IRD1|RL21_GEOTN 50S ribosomal protein L21 OS=Geobacillus thermodenitrificans
(strain NG80-2) GN=rplU PE=3 SV=1
Length = 102
Score = 84.3 bits (207), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++A++ G +Q V G+ IY ++L AN D + +KVL VG +T IG P V A V
Sbjct: 1 MYAIIETGGKQLKVQEGQEIYIEKLD-ANEGDTVTFDKVLFVGGETVK-IGNPTVEGATV 58
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
A V++ G K+IVFKYK KKNYRR GHRQP T++ I I
Sbjct: 59 TAKVQKHGRQKKIIVFKYKAKKNYRRKQGHRQPYTKVVIEKI 100
>sp|Q5KWP1|RL21_GEOKA 50S ribosomal protein L21 OS=Geobacillus kaustophilus (strain
HTA426) GN=rplU PE=3 SV=1
Length = 102
Score = 84.0 bits (206), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++A++ G +Q V G+ IY ++L AN D + +KVL VG +T IG P V A V
Sbjct: 1 MYAIIETGGKQLKVEEGQEIYIEKLD-ANEGDTVTFDKVLFVGGETVK-IGNPTVEGATV 58
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
A V++ G K+IVFKYK KKNYRR GHRQP T++ I I
Sbjct: 59 TARVQKHGRQKKIIVFKYKAKKNYRRKQGHRQPYTKVVIEKI 100
>sp|B6IR01|RL21_RHOCS 50S ribosomal protein L21 OS=Rhodospirillum centenum (strain ATCC
51521 / SW) GN=rplU PE=3 SV=1
Length = 103
Score = 83.6 bits (205), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
+FAV+ G +QY V G I ++L A+ + L+ VL+V T IG PVV AAV
Sbjct: 1 MFAVIRTGGKQYKVANGDVIKVEKLV-ADAGATVTLDDVLMVSDAGKTTIGTPVVQGAAV 59
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
A V Q PK+I+FK K+++NYRR GHRQ T +RITGI
Sbjct: 60 TAEVVAQSRGPKIIIFKKKRRQNYRRKNGHRQDLTVLRITGI 101
>sp|Q3A1D6|RL21_PELCD 50S ribosomal protein L21 OS=Pelobacter carbinolicus (strain DSM
2380 / Gra Bd 1) GN=rplU PE=3 SV=1
Length = 102
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 68/102 (66%), Gaps = 2/102 (1%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++AV+ G +QY V G + ++++GA V D I L++VL+VG + IG P++ A V
Sbjct: 1 MYAVIKTGGKQYKVSEGDLVKIEKIEGA-VGDTIELDEVLMVGGEEVK-IGTPLLPGAKV 58
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
A + +QG + KV+VF K++K YR+ GHRQP TR++ITGI
Sbjct: 59 TARIVQQGKDKKVLVFHSKRRKGYRKTYGHRQPITRLQITGI 100
>sp|Q24SN7|RL21_DESHY 50S ribosomal protein L21 OS=Desulfitobacterium hafniense (strain
Y51) GN=rplU PE=3 SV=1
Length = 103
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++AV+ G +Q+ V G+ ++ ++L ANV D + ++KVLLV +G PVV A
Sbjct: 1 MYAVIETGGKQFRVEEGKVLFVEKLD-ANVGDTVTIDKVLLVEKDGAVKVGTPVVDGAKA 59
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
V E G K+IVFK K KKNYRR GHRQP T++ + I
Sbjct: 60 LLKVVEHGKGEKIIVFKMKSKKNYRRKQGHRQPYTKVVVEAI 101
>sp|B8FUS3|RL21_DESHD 50S ribosomal protein L21 OS=Desulfitobacterium hafniense (strain
DCB-2 / DSM 10664) GN=rplU PE=3 SV=1
Length = 103
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++AV+ G +Q+ V G+ ++ ++L ANV D + ++KVLLV +G PVV A
Sbjct: 1 MYAVIETGGKQFRVEEGKVLFVEKLD-ANVGDTVTIDKVLLVEKDGAVKVGTPVVDGAKA 59
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
V E G K+IVFK K KKNYRR GHRQP T++ + I
Sbjct: 60 LLKVVEHGKGEKIIVFKMKSKKNYRRKQGHRQPYTKVVVEAI 101
>sp|B2TK75|RL21_CLOBB 50S ribosomal protein L21 OS=Clostridium botulinum (strain Eklund
17B / Type B) GN=rplU PE=3 SV=1
Length = 103
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++AV+ G +QY V G IY ++L A V+ + L +VL V +G PVV A V
Sbjct: 1 MYAVLATGGKQYRVQEGDVIYVEKLD-AEVDSTVELTEVLAVANDEGIKVGAPVVEGAKV 59
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
A V QG KVIVFKYK KK+YRR GHRQP T++ I I
Sbjct: 60 TAKVLAQGKQKKVIVFKYKAKKDYRRKNGHRQPYTKLVIEKI 101
>sp|Q88WN5|RL21_LACPL 50S ribosomal protein L21 OS=Lactobacillus plantarum (strain ATCC
BAA-793 / NCIMB 8826 / WCFS1) GN=rplU PE=3 SV=1
Length = 102
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++A+++ G +QY V G+ IY ++L A DK+ ++V+ VG TT +G P V A V
Sbjct: 1 MYAIIVTGGKQYKVEAGQAIYVEKLDAA-AGDKVTFDQVVFVGGDTTK-VGTPTVDGATV 58
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRI 201
VE+QG + KV+ FKYK KK GHRQP T++ I
Sbjct: 59 EGTVEKQGRDRKVVTFKYKAKKGQHTKKGHRQPYTKVTI 97
>sp|A6TQJ2|RL21_ALKMQ 50S ribosomal protein L21 OS=Alkaliphilus metalliredigens (strain
QYMF) GN=rplU PE=3 SV=1
Length = 103
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++A++ G +QY V G ++ ++L+ A+ +D + ++ VL V + IG P+V A V
Sbjct: 1 MYAIIETGGKQYRVQEGDTLFVEKLE-ASKDDVVTIDNVLAVSKDGSLTIGSPIVEGAKV 59
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
A V EQG K+IVFKYK KK+YRR GHRQP T++ I I
Sbjct: 60 EAKVVEQGKGKKIIVFKYKPKKDYRRKQGHRQPYTKLIIEKI 101
>sp|Q747M9|RL21_GEOSL 50S ribosomal protein L21 OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=rplU PE=3 SV=1
Length = 102
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 68/102 (66%), Gaps = 2/102 (1%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++AV+ G +QY V G F+ ++L+GA V D + L VL+VG +T IG P+V +A+V
Sbjct: 1 MYAVIRTGGKQYKVSEGDFLKVEKLEGA-VGDTVELKDVLMVGGETVA-IGTPLVPSASV 58
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
+ +QG + K++VFK K++KN+R+ GHRQP T ++I I
Sbjct: 59 VGRIVDQGKDKKILVFKSKRRKNFRKMYGHRQPRTVLKIEKI 100
>sp|Q5WES3|RL21_BACSK 50S ribosomal protein L21 OS=Bacillus clausii (strain KSM-K16)
GN=rplU PE=3 SV=1
Length = 102
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++A++ G +Q V G+ IY ++L A +++ +KVL VG ++ +G P V A+V
Sbjct: 1 MYAIIETGGKQIKVEEGQEIYVEKLD-AEAGEEVSFDKVLFVGGESAK-VGAPFVEGASV 58
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGITG 206
VE+ G N K+IV+K K KKNYRR GHRQP T++ I I G
Sbjct: 59 TGTVEKHGRNKKIIVYKMKAKKNYRRKQGHRQPYTKVVIGKING 102
>sp|B2V0A5|RL21_CLOBA 50S ribosomal protein L21 OS=Clostridium botulinum (strain Alaska
E43 / Type E3) GN=rplU PE=3 SV=1
Length = 103
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++AV+ G +QY V G IY ++L A V+ + L +VL V +G PVV A V
Sbjct: 1 MYAVLATGGKQYRVQEGDVIYVEKLD-AEVDSTVELTEVLAVANGEGIKVGAPVVEGAKV 59
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
A V QG KVIVFKYK KK+YRR GHRQP T++ I I
Sbjct: 60 TAKVLAQGKQKKVIVFKYKAKKDYRRKNGHRQPYTKLVIEKI 101
>sp|B2GD73|RL21_LACF3 50S ribosomal protein L21 OS=Lactobacillus fermentum (strain NBRC
3956 / LMG 18251) GN=rplU PE=3 SV=1
Length = 102
Score = 80.9 bits (198), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++A+++ G +QY V G+ IY ++L A DK+ +KV+ VG T IG P V A+V
Sbjct: 1 MYAIIVTGGKQYKVEAGQAIYVEKLD-AQAGDKVTFDKVVFVGGDDTK-IGTPFVDGASV 58
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
V++QG KV+ FKYK KK+ GHRQP T++ I I
Sbjct: 59 EGTVDKQGKEKKVVTFKYKPKKHTHTKQGHRQPYTKVTIDAI 100
>sp|B8FM66|RL21_DESAA 50S ribosomal protein L21 OS=Desulfatibacillum alkenivorans (strain
AK-01) GN=rplU PE=3 SV=1
Length = 105
Score = 80.5 bits (197), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++AV+ G +QY V G + ++L G V D + L++VLL +G+P V N AV
Sbjct: 1 MYAVIATGGKQYKVGEGEIVRVEKLPG-EVGDTVRLDQVLLFSDGENVKVGQPTVENVAV 59
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
A + EQG KV+VF++K++K YR+ GHRQP T ++I I
Sbjct: 60 DAQIVEQGKAKKVLVFRFKRRKGYRKKQGHRQPFTALKINKI 101
>sp|Q892N4|RL21_CLOTE 50S ribosomal protein L21 OS=Clostridium tetani (strain
Massachusetts / E88) GN=rplU PE=3 SV=2
Length = 104
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYI-GKPVVTNAA 161
++AVV+ G +QY V G ++ ++L A V+ I L+ VL + ++ GKPVV A
Sbjct: 1 MYAVVVTGGKQYKVTEGDVLFVEKLD-AEVDAAIELDNVLAISKDNGEFVVGKPVVEGAK 59
Query: 162 VHAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGIT 205
V A V +QG KV+VFKYK KK+YR+ GHRQP T+I+I I
Sbjct: 60 VTAKVLKQGKAKKVVVFKYKPKKHYRKKQGHRQPYTKIQIEKIN 103
>sp|A8MHL1|RL21_ALKOO 50S ribosomal protein L21 OS=Alkaliphilus oremlandii (strain
OhILAs) GN=rplU PE=3 SV=1
Length = 103
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++A++ G +QY V G ++ ++L AN D + ++ VL V +G P+V A V
Sbjct: 1 MYAIIETGGKQYRVQEGDTLFVEKLD-ANQGDIVTIDSVLAVSKDGNLTVGAPMVAGAKV 59
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
A V EQG K+I+FKYK KK+YRR GHRQP T++ I I
Sbjct: 60 EAKVLEQGKAKKIIIFKYKPKKDYRRKQGHRQPYTKLVIEKI 101
>sp|B2A6B3|RL21_NATTJ 50S ribosomal protein L21 OS=Natranaerobius thermophilus (strain
ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=rplU PE=3
SV=1
Length = 105
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++AV+ G +QY V G + ++L +++ +KVLLV +G PV+ A V
Sbjct: 1 MYAVIETGGKQYKVSEGDVLEIEKL-SQETEEQVTFDKVLLVKDDENVKVGTPVLEEAQV 59
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
V E G KV VFKYK KKNYRR GHRQP ++++I I
Sbjct: 60 EGTVLEHGKGEKVTVFKYKPKKNYRRKQGHRQPFSKVKIDKI 101
>sp|Q0SR51|RL21_CLOPS 50S ribosomal protein L21 OS=Clostridium perfringens (strain SM101
/ Type A) GN=rplU PE=3 SV=1
Length = 103
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++AV+ G +QY V G ++ ++L A V+ + L +VL V +G PVV A V
Sbjct: 1 MYAVLTTGGKQYRVQEGDVLFVEKL-NAEVDSTVELTEVLAVAKDGEIKVGAPVVEGAKV 59
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
A V QG KV+VFKYK+KK+YRR GHRQP T+I I I
Sbjct: 60 VAKVLAQGKAKKVVVFKYKRKKDYRRKNGHRQPYTKIVIEKI 101
>sp|Q8XII9|RL21_CLOPE 50S ribosomal protein L21 OS=Clostridium perfringens (strain 13 /
Type A) GN=rplU PE=3 SV=1
Length = 103
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++AV+ G +QY V G ++ ++L A V+ + L +VL V +G PVV A V
Sbjct: 1 MYAVLTTGGKQYRVQEGDVLFVEKL-NAEVDSTVELTEVLAVAKDGEIKVGAPVVEGAKV 59
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
A V QG KV+VFKYK+KK+YRR GHRQP T+I I I
Sbjct: 60 VAKVLAQGKAKKVVVFKYKRKKDYRRKNGHRQPYTKIVIEKI 101
>sp|Q0TNI2|RL21_CLOP1 50S ribosomal protein L21 OS=Clostridium perfringens (strain ATCC
13124 / NCTC 8237 / Type A) GN=rplU PE=3 SV=1
Length = 103
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++AV+ G +QY V G ++ ++L A V+ + L +VL V +G PVV A V
Sbjct: 1 MYAVLTTGGKQYRVQEGDVLFVEKL-NAEVDSTVELTEVLAVAKDGEIKVGAPVVEGAKV 59
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
A V QG KV+VFKYK+KK+YRR GHRQP T+I I I
Sbjct: 60 VAKVLAQGKAKKVVVFKYKRKKDYRRKNGHRQPYTKIVIEKI 101
>sp|C5D5G9|RL21_GEOSW 50S ribosomal protein L21 OS=Geobacillus sp. (strain WCH70) GN=rplU
PE=3 SV=1
Length = 102
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++A++ G +Q V G+ IY +++ A + + +KVL VG +T IG P V A V
Sbjct: 1 MYAIIETGGKQIKVEEGQEIYIEKID-AQEGETVTFDKVLFVGGETVK-IGNPTVEGATV 58
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
A V++ G K+IVFKYK KKNYRR GHRQP T++ I I
Sbjct: 59 TAKVQKHGRQKKIIVFKYKAKKNYRRKQGHRQPYTKVVIEKI 100
>sp|B2G858|RL21_LACRJ 50S ribosomal protein L21 OS=Lactobacillus reuteri (strain JCM
1112) GN=rplU PE=3 SV=1
Length = 102
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++A+++ G +QY V G IY ++L A DK+ ++V+ VG T IG PVV A+V
Sbjct: 1 MYAIIVTGGKQYKVEEGASIYVEKLD-AKEGDKVTFDQVIFVGGDDTK-IGTPVVDGASV 58
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
V++QG KV+ FKYK KK+ GHRQP T++ I I
Sbjct: 59 EGTVDKQGKEKKVVTFKYKPKKHTHTKQGHRQPYTKVTINKI 100
>sp|A5VKS5|RL21_LACRD 50S ribosomal protein L21 OS=Lactobacillus reuteri (strain DSM
20016) GN=rplU PE=3 SV=1
Length = 102
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++A+++ G +QY V G IY ++L A DK+ ++V+ VG T IG PVV A+V
Sbjct: 1 MYAIIVTGGKQYKVEEGASIYVEKLD-AKEGDKVTFDQVIFVGGDDTK-IGTPVVDGASV 58
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
V++QG KV+ FKYK KK+ GHRQP T++ I I
Sbjct: 59 EGTVDKQGKEKKVVTFKYKPKKHTHTKQGHRQPYTKVTINKI 100
>sp|Q2VZU4|RL21_MAGSA 50S ribosomal protein L21 OS=Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264) GN=rplU PE=3 SV=1
Length = 100
Score = 77.8 bits (190), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 5/103 (4%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
+FAV+ G +QY V G I ++L G +++L++VL+VG K IG PVV A+V
Sbjct: 1 MFAVIQTGGKQYKVASGDVIRVEKLAG-EAGAEVVLDQVLMVGDK----IGVPVVAGASV 55
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGIT 205
A V Q K+IVFK ++++N RR GHRQ T +RIT I+
Sbjct: 56 KATVVAQARGEKIIVFKKRRRQNSRRKNGHRQDLTILRITDIS 98
>sp|C1KVI9|RL21_LISMC 50S ribosomal protein L21 OS=Listeria monocytogenes serotype 4b
(strain CLIP80459) GN=rplU PE=3 SV=1
Length = 102
Score = 77.8 bits (190), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++A++ G +Q V G+ IY ++L G V D I +KVL VG + +G P V A V
Sbjct: 1 MYAIIETGGKQIKVEAGQEIYVEKLAG-EVGDVITFDKVLFVGGDSAK-VGVPFVEGATV 58
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
A VE+QG K+ V+KYK KKNY + GHRQP T++ I I
Sbjct: 59 TAKVEKQGRAKKLTVYKYKPKKNYHKKQGHRQPYTKLTIDAI 100
>sp|A1WY50|RL21_HALHL 50S ribosomal protein L21 OS=Halorhodospira halophila (strain DSM
244 / SL1) GN=rplU PE=3 SV=1
Length = 104
Score = 77.4 bits (189), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++AV+ G +QY V G + ++L A V + + + VL+VG+ + IG P V +V
Sbjct: 1 MYAVIRSGGKQYRVSEGDVLRVEKLP-AEVGETVQFDDVLMVGSGSEVKIGTPHVEGGSV 59
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGIT 205
A V EQ + KV V K+K+++ YRR+ GHRQP T+++ITGI+
Sbjct: 60 KAEVLEQDRHRKVEVTKFKRRQGYRRHHGHRQPYTQVKITGIS 102
>sp|Q4ZYK3|RL21_PSEU2 50S ribosomal protein L21 OS=Pseudomonas syringae pv. syringae
(strain B728a) GN=rplU PE=3 SV=1
Length = 103
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++AV++ G +QY V PG ++ ++L+ A + + ++VLLVG IG PVV A V
Sbjct: 1 MYAVIVTGGKQYKVAPGEYLKIEKLEIAT-GESVTFDRVLLVGNGDDVNIGAPVVAGATV 59
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
A V QG + KV + K++++K++ + +GHRQ T I+ITGI
Sbjct: 60 VAEVVSQGRHDKVRIIKFRRRKHHMKRMGHRQWYTEIKITGI 101
>sp|Q48NL4|RL21_PSE14 50S ribosomal protein L21 OS=Pseudomonas syringae pv. phaseolicola
(strain 1448A / Race 6) GN=rplU PE=3 SV=2
Length = 103
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++AV++ G +QY V PG ++ ++L+ A + + ++VLLVG IG PVV A V
Sbjct: 1 MYAVIVTGGKQYKVAPGEYLKIEKLEIAT-GESVTFDRVLLVGNGDDVNIGAPVVAGATV 59
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
A V QG + KV + K++++K++ + +GHRQ T I+ITGI
Sbjct: 60 VAEVVSQGRHDKVRIIKFRRRKHHMKRMGHRQWYTEIKITGI 101
>sp|A0AIZ1|RL21_LISW6 50S ribosomal protein L21 OS=Listeria welshimeri serovar 6b (strain
ATCC 35897 / DSM 20650 / SLCC5334) GN=rplU PE=3 SV=1
Length = 102
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++A++ G +Q V G+ IY ++L G V D + +KVL VG + +G P V A V
Sbjct: 1 MYAIIETGGKQIKVEAGQEIYVEKLAG-EVGDVVTFDKVLFVGGDSAK-VGVPFVDGATV 58
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
A VE+QG K+ V+KYK KKNY + GHRQP T++ I I
Sbjct: 59 TAKVEKQGRAKKLTVYKYKPKKNYHKKQGHRQPYTKLTIDAI 100
>sp|Q92BH2|RL21_LISIN 50S ribosomal protein L21 OS=Listeria innocua serovar 6a (strain
CLIP 11262) GN=rplU PE=3 SV=1
Length = 102
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
++A++ G +Q V G+ IY ++L G V D + +KVL VG + +G P V A V
Sbjct: 1 MYAIIETGGKQIKVEAGQEIYVEKLAG-EVGDVVTFDKVLFVGGDSAK-VGVPFVDGATV 58
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
A VE+QG K+ V+KYK KKNY + GHRQP T++ I I
Sbjct: 59 TAKVEKQGRAKKLTVYKYKPKKNYHKKQGHRQPYTKLTIDAI 100
>sp|B9E724|RL21_MACCJ 50S ribosomal protein L21 OS=Macrococcus caseolyticus (strain
JCSC5402) GN=rplU PE=3 SV=1
Length = 102
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAV 162
+FA++ G +Q V G+ I+ ++L A ++VL+VG +T +G PVV A V
Sbjct: 1 MFAIIETGGKQLKVEQGQEIWVEKLN-AEEGSTFTFDQVLMVGGETVK-VGSPVVEGATV 58
Query: 163 HAVVEEQGLNPKVIVFKYKKKKNYRRNIGHRQPNTRIRITGI 204
A VE+ G K+ VFKYK KKNY+R GHRQP T++ I I
Sbjct: 59 TAKVEKHGRGKKITVFKYKPKKNYKRKQGHRQPYTKLVIEAI 100
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,161,839
Number of Sequences: 539616
Number of extensions: 3352231
Number of successful extensions: 15712
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 120
Number of HSP's that attempted gapping in prelim test: 13891
Number of HSP's gapped (non-prelim): 1275
length of query: 222
length of database: 191,569,459
effective HSP length: 113
effective length of query: 109
effective length of database: 130,592,851
effective search space: 14234620759
effective search space used: 14234620759
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)