Query 027520
Match_columns 222
No_of_seqs 118 out of 1087
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 11:09:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027520.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027520hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK14348 lipoate-protein ligas 100.0 3.8E-73 8.3E-78 488.2 18.6 207 7-214 3-219 (221)
2 PRK14342 lipoate-protein ligas 100.0 1.3E-72 2.8E-77 482.6 18.0 204 5-217 4-207 (213)
3 PRK14345 lipoate-protein ligas 100.0 2.5E-72 5.4E-77 487.1 18.9 205 4-217 9-219 (234)
4 PRK14341 lipoate-protein ligas 100.0 4.6E-72 9.9E-77 479.5 18.2 202 5-214 3-212 (213)
5 PRK14343 lipoate-protein ligas 100.0 3.7E-71 8.1E-76 478.6 19.2 207 3-217 11-222 (235)
6 PRK14344 lipoate-protein ligas 100.0 5E-71 1.1E-75 474.9 18.7 205 5-214 17-222 (223)
7 COG0321 LipB Lipoate-protein l 100.0 3.3E-71 7.1E-76 470.9 16.6 204 5-216 9-213 (221)
8 PRK14347 lipoate-protein ligas 100.0 1.7E-70 3.7E-75 467.8 18.2 199 7-213 3-208 (209)
9 PRK14346 lipoate-protein ligas 100.0 7.1E-70 1.5E-74 469.0 18.3 199 7-214 3-229 (230)
10 PRK14349 lipoate-protein ligas 100.0 1.7E-69 3.6E-74 464.0 17.9 200 9-217 2-208 (220)
11 TIGR00214 lipB lipoate-protein 100.0 1.3E-65 2.8E-70 431.0 14.4 177 33-214 8-184 (184)
12 KOG0325 Lipoyltransferase [Ene 100.0 1.2E-56 2.6E-61 380.0 15.8 212 1-218 1-217 (226)
13 TIGR00545 lipoyltrans lipoyltr 99.8 2.8E-19 6E-24 162.4 14.7 195 9-211 3-208 (324)
14 PRK03822 lplA lipoate-protein 99.8 4.4E-19 9.5E-24 161.9 14.5 198 5-215 2-214 (338)
15 COG0095 LplA Lipoate-protein l 99.8 1.5E-17 3.2E-22 145.8 14.6 203 7-216 2-217 (248)
16 PRK14061 unknown domain/lipoat 99.8 1.8E-17 3.8E-22 159.3 15.9 199 5-216 226-439 (562)
17 PF03099 BPL_LplA_LipB: Biotin 99.5 1.2E-14 2.6E-19 112.6 6.9 116 51-168 1-125 (125)
18 PRK08330 biotin--protein ligas 99.5 1E-13 2.2E-18 120.5 9.4 124 79-212 42-165 (236)
19 KOG3159 Lipoate-protein ligase 99.1 4.6E-10 9.9E-15 100.4 9.6 182 30-220 32-227 (336)
20 PRK05935 biotin--protein ligas 98.4 1.9E-06 4.1E-11 73.1 10.1 126 79-211 44-173 (190)
21 COG0340 BirA Biotin-(acetyl-Co 98.1 9.5E-06 2.1E-10 71.1 6.9 125 78-211 35-165 (238)
22 TIGR00121 birA_ligase birA, bi 98.0 3.3E-05 7.3E-10 67.1 8.8 122 79-211 40-168 (237)
23 PTZ00275 biotin-acetyl-CoA-car 97.8 0.00013 2.7E-09 65.5 8.8 108 80-196 71-190 (285)
24 PRK11886 bifunctional biotin-- 97.6 0.00024 5.1E-09 64.3 8.3 123 78-210 116-246 (319)
25 PTZ00276 biotin/lipoate protei 97.6 0.00023 5E-09 62.4 7.4 87 79-169 47-138 (245)
26 PRK08477 biotin--protein ligas 96.9 0.0056 1.2E-07 52.8 8.4 87 79-169 42-132 (211)
27 PRK13325 bifunctional biotin-- 96.6 0.0078 1.7E-07 59.3 7.8 88 78-167 123-215 (592)
28 PRK06955 biotin--protein ligas 96.3 0.02 4.2E-07 51.7 8.0 87 78-168 78-176 (300)
29 KOG0325 Lipoyltransferase [Ene 92.3 0.083 1.8E-06 45.9 1.9 31 70-101 142-172 (226)
30 KOG1536 Biotin holocarboxylase 85.7 2.5 5.5E-05 41.5 6.8 101 77-193 425-537 (649)
31 PF04017 DUF366: Domain of unk 61.6 17 0.00037 30.8 4.8 91 91-189 63-157 (183)
32 PF13823 ADH_N_assoc: Alcohol 59.9 5.9 0.00013 22.5 1.2 12 83-94 4-15 (23)
33 COG2029 Uncharacterized conser 56.2 22 0.00047 30.0 4.5 51 113-168 90-142 (189)
34 PF09322 DUF1979: Domain of un 49.3 14 0.0003 25.4 1.9 38 84-121 9-54 (58)
35 PF06378 DUF1071: Protein of u 41.4 2.1E+02 0.0045 24.0 8.1 46 82-127 74-122 (164)
36 PRK05761 DNA polymerase I; Rev 28.1 1.3E+02 0.0027 31.1 5.8 42 87-128 721-772 (787)
37 COG3818 Predicted acetyltransf 23.7 36 0.00078 27.9 0.8 18 34-51 69-86 (167)
38 PRK00407 hypothetical protein; 23.2 63 0.0014 25.9 2.1 17 83-99 117-139 (139)
39 COG3760 Uncharacterized conser 21.5 38 0.00083 28.1 0.5 15 41-55 20-34 (164)
40 PRK04217 hypothetical protein; 20.9 41 0.00089 26.2 0.6 28 163-191 18-46 (110)
41 COG2961 ComJ Protein involved 20.8 45 0.00097 30.0 0.8 34 91-128 192-227 (279)
42 COG2333 ComEC Predicted hydrol 20.7 1.3E+02 0.0027 27.4 3.7 46 47-92 235-281 (293)
No 1
>PRK14348 lipoate-protein ligase B; Provisional
Probab=100.00 E-value=3.8e-73 Score=488.24 Aligned_cols=207 Identities=39% Similarity=0.629 Sum_probs=194.0
Q ss_pred eEEEEcCccCHHHHHHHHHHHHHHHhc----CC-CCCEEEEEeCCCeeeecCCCCCCCCCCcHHHHhhcCCeEEEeecCC
Q 027520 7 LQIWRLGIVNYSDALKLQEKLVSDRKI----HK-ISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGG 81 (222)
Q Consensus 7 l~v~~lg~~~Y~~~~~~Q~~l~~~~~~----~~-~~~~lll~eH~PvyT~Gr~~~~~~~l~~~~~l~~~gi~v~~~~RGG 81 (222)
..++++|+++|.+||++|+++++.+.+ +. .+|+||+||||||||+|+++++++++.+++.+++.|++|++|+|||
T Consensus 3 ~~~~~lg~~~Y~~a~~~q~~~~~~~~~~~~~~~~~~d~llllEH~pVyT~G~~~~~~~ll~~~~~l~~~~~~v~~t~RGG 82 (221)
T PRK14348 3 TITTDWELIPYSEAWSRQTEWFDALVHAKQNGESYENRIIFCEHPHVYTLGRSGKENNMLLGEEQLKTIGATLYHIDRGG 82 (221)
T ss_pred EEEEecCCcCHHHHHHHHHHHHHHHHhhhhcCCCCCCEEEEEcCCCCeeCCcCCCchhccCChhhhcccCCcEEEeCCCC
Confidence 467899999999999999988876543 22 3699999999999999999999999988888999999999999999
Q ss_pred ceeEeCCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCeEEec-----CCeEeeecceeeeee
Q 027520 82 DITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVG-----DRKIGAIGVRIQYGI 156 (222)
Q Consensus 82 ~iTyHgPGQLv~YpIl~l~~~~~~~~~yv~~Le~~~i~~l~~~gi~a~~~~~~~~GVwv~-----~~KIasiGv~i~~~v 156 (222)
++|||||||||+|||+||++++.++++|++.||+++|++|++|||++ .+.++++||||+ ++||||||+++++||
T Consensus 83 ~iTyHGPGQlV~Ypil~L~~~~~~v~~yv~~lE~~vI~~l~~~gi~~-~~~~~~~GVWv~~~~~~~~KIaaIGv~v~r~v 161 (221)
T PRK14348 83 DITYHGPGQLVCYPILNLEEFGLGLKEYVHLLEEAVIRVCASYGVVA-GRLEKATGVWLEGDTSRARKICAIGVRSSHYV 161 (221)
T ss_pred ceEEECCCeEEEEEEEEccccCCCHHHHHHHHHHHHHHHHHHcCCce-eecCCCCCEEecCCCCCCCcEEEEeEEeccce
Confidence 99999999999999999999999999999999999999999999999 578899999998 589999999999999
Q ss_pred eeeccccccCCCccccccccCCCCCCCcceeehhhhcCCccccccccccccchhhhhC
Q 027520 157 TSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGNGIYEAVEKPAPHVTYSKEHQ 214 (222)
Q Consensus 157 t~HG~aLNv~~dL~~f~~I~pCGl~~~~vTSl~~~~~~~~~~~~~~~~~~~~f~~~~~ 214 (222)
|+||||||||+||++|+.|+|||++|+.||||++++|..++.+++++.....|++.|+
T Consensus 162 T~HG~ALNv~~dL~~F~~IvPCGl~~~~vTSl~~~~g~~~~~~~v~~~l~~~f~~~~~ 219 (221)
T PRK14348 162 TMHGLALNVNTDLRYFSYIHPCGFIDKGVTSLQQELGHSIDMAEVKERLGRELLAALL 219 (221)
T ss_pred eecceEEEecCChHHhccCccCCCCCCcEEeeHHHhCCCCCHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999999999899988775
No 2
>PRK14342 lipoate-protein ligase B; Provisional
Probab=100.00 E-value=1.3e-72 Score=482.58 Aligned_cols=204 Identities=28% Similarity=0.525 Sum_probs=191.0
Q ss_pred ceeEEEEcCccCHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCeeeecCCCCCCCCCCcHHHHhhcCCeEEEeecCCcee
Q 027520 5 RSLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDIT 84 (222)
Q Consensus 5 ~~l~v~~lg~~~Y~~~~~~Q~~l~~~~~~~~~~~~lll~eH~PvyT~Gr~~~~~~~l~~~~~l~~~gi~v~~~~RGG~iT 84 (222)
+.+.+.++|+++|.+||++|+++++.+..+ .+|+||+||||||||+|++++.++++.+ .+++|++++|||++|
T Consensus 4 ~~~~~~~lg~~~Y~~a~~~Q~~l~~~~~~~-~~d~llllEH~pVyT~Gr~~~~~~ll~~------~~~~v~~~~RGG~iT 76 (213)
T PRK14342 4 NKLIVRQLGLQPYEPVWQAMQEFTDTRDEE-TPDEIWLVEHPPVFTQGQAGKPEHILNP------GDIPVVQSDRGGQVT 76 (213)
T ss_pred CeEEEEeCCCcCHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCCccCCCCCChhhccCC------CCCcEEEecCCCceE
Confidence 558899999999999999999999887654 6799999999999999999998887632 489999999999999
Q ss_pred EeCCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCeEEecCCeEeeecceeeeeeeeeccccc
Q 027520 85 FHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFN 164 (222)
Q Consensus 85 yHgPGQLv~YpIl~l~~~~~~~~~yv~~Le~~~i~~l~~~gi~a~~~~~~~~GVwv~~~KIasiGv~i~~~vt~HG~aLN 164 (222)
||||||||+|||+||++++.++++|++.||+++|++|+.|||++ .+.++++|||++++||||||+++++|||+||||||
T Consensus 77 yHGPGQLV~YpIl~L~~~~~~~~~yv~~lE~~vi~~l~~~gi~~-~~~~~~~GVWv~~~KIaaIGv~v~r~vT~HG~AlN 155 (213)
T PRK14342 77 YHGPGQLVMYVLLDLKRLKLGVRQLVTAIEQTVINTLAEYGIEA-HAKPDAPGVYVDGKKIASLGLRIRRGCSFHGLALN 155 (213)
T ss_pred EECCCeEEEEEEEEccccCCCHHHHHHHHHHHHHHHHHHcCCce-eecCCCCcCcccCCEEEEEEEeEecceeecceeEe
Confidence 99999999999999999999999999999999999999999999 57789999999999999999999999999999999
Q ss_pred cCCCccccccccCCCCCCCcceeehhhhcCCccccccccccccchhhhhCcee
Q 027520 165 IDPDLNYFKHIVPCGIADKDVTSLRRETGNGIYEAVEKPAPHVTYSKEHQCHQ 217 (222)
Q Consensus 165 v~~dL~~f~~I~pCGl~~~~vTSl~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 217 (222)
||+||++|+.|+|||++|+.||||+++ +..++.+++++.....|++.|+++.
T Consensus 156 v~~dL~~F~~IvPCGl~~~~vTSl~~~-~~~~~~~~v~~~~~~~f~~~f~~~~ 207 (213)
T PRK14342 156 VNMDLSPFLRINPCGYAGLEMTQLSDL-GGPATVDEVAPRLLAELLALLGYND 207 (213)
T ss_pred cCCCchhhCcEecCCCCCCcEeeHHHh-CCCCCHHHHHHHHHHHHHHHhCCcc
Confidence 999999999999999999999999864 7788999999999999999998764
No 3
>PRK14345 lipoate-protein ligase B; Provisional
Probab=100.00 E-value=2.5e-72 Score=487.06 Aligned_cols=205 Identities=40% Similarity=0.654 Sum_probs=193.0
Q ss_pred CceeEEEEcCccCHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCeeeecCCCCCCCCCCcHHHHhhcCCeEEEeecCCce
Q 027520 4 PRSLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDI 83 (222)
Q Consensus 4 ~~~l~v~~lg~~~Y~~~~~~Q~~l~~~~~~~~~~~~lll~eH~PvyT~Gr~~~~~~~l~~~~~l~~~gi~v~~~~RGG~i 83 (222)
++.+.+++||+++|.++|++|+++++.+.++..+|+||+||||||||+|+++++++++. .+++|++|+|||++
T Consensus 9 ~~~~~~~~lG~~~Y~~~~~~Q~~l~~~~~~~~~~d~llllEH~pVyT~Gr~~~~~~l~~-------~~i~v~~tdRGG~i 81 (234)
T PRK14345 9 TMPIEVRRLGLVDYQEAWDLQRELADARVAGEGPDTLLLLEHPAVYTAGKRTEPHERPT-------DGTPVVDVDRGGKI 81 (234)
T ss_pred CCceEEEECCCcCHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccCCCCCCcccccc-------CCCcEEEecCCCce
Confidence 35689999999999999999999999998887889999999999999999998877642 37999999999999
Q ss_pred eEeCCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCeEEec------CCeEeeecceeeeeee
Q 027520 84 TFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVG------DRKIGAIGVRIQYGIT 157 (222)
Q Consensus 84 TyHgPGQLv~YpIl~l~~~~~~~~~yv~~Le~~~i~~l~~~gi~a~~~~~~~~GVwv~------~~KIasiGv~i~~~vt 157 (222)
|||||||||+|||+||++ +.++++|++.||+++|++|++|||++ .+.++++||||+ ++||||||++++||||
T Consensus 82 TyHGPGQLV~YpIldL~~-~~~v~~yv~~LE~~vI~~l~~~gi~a-~~~~~~~GVWv~~~~~~~~~KIaaIGv~v~r~vT 159 (234)
T PRK14345 82 TWHGPGQLVGYPIIKLAE-PLDVVDYVRRLEEALIAVCADLGLNA-GRVDGRSGVWVPADGGRPDRKIAAIGIRVSRGVT 159 (234)
T ss_pred eEeCCCeEEEEEEEecCC-CCCHHHHHHHHHHHHHHHHHHcCCce-eecCCCCeEEECCCCCCCcceEEEEEeeecccee
Confidence 999999999999999998 68999999999999999999999999 578899999997 6999999999999999
Q ss_pred eeccccccCCCccccccccCCCCCCCcceeehhhhcCCccccccccccccchhhhhCcee
Q 027520 158 SHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGNGIYEAVEKPAPHVTYSKEHQCHQ 217 (222)
Q Consensus 158 ~HG~aLNv~~dL~~f~~I~pCGl~~~~vTSl~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 217 (222)
+||||||||+||++|+.|+|||++|+.||||+++++..++.+++++.....|.+.|+.+.
T Consensus 160 ~HG~ALNV~~DL~~F~~IvPCGl~~~~vTSl~~~~g~~~~~~~v~~~l~~~f~~~f~~~~ 219 (234)
T PRK14345 160 MHGFALNCDNDLAAFDAIVPCGISDAGVTTLSAELGRTVTVAEVVDPVAAALCDALDGRL 219 (234)
T ss_pred ecceEEEeCCChHHhceEEeCCCCCCcEEehhHhhCCCCCHHHHHHHHHHHHHHHhCccc
Confidence 999999999999999999999999999999999999999999999999999999998753
No 4
>PRK14341 lipoate-protein ligase B; Provisional
Probab=100.00 E-value=4.6e-72 Score=479.46 Aligned_cols=202 Identities=31% Similarity=0.502 Sum_probs=189.8
Q ss_pred ceeEEEEcCccCHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCeeeecCCCCCCCCCCcHHHHhhcCCeEEEeecCCcee
Q 027520 5 RSLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDIT 84 (222)
Q Consensus 5 ~~l~v~~lg~~~Y~~~~~~Q~~l~~~~~~~~~~~~lll~eH~PvyT~Gr~~~~~~~l~~~~~l~~~gi~v~~~~RGG~iT 84 (222)
....++++|+++|.++|++|+++++.+.++..+|+||+||||||||+|++++.++++.+ .+++|++|+|||++|
T Consensus 3 ~~~~~~~~g~~~Y~~~~~~q~~~~~~~~~~~~~~~llllEH~pVyT~G~~~~~~~ll~~------~~i~v~~t~RGG~iT 76 (213)
T PRK14341 3 PVEWRISDGLVPYPEALAFMEARVAAIAAGTADELVWLLEHPPLYTAGTSAKAEDLLDP------DRFPVYETGRGGQYT 76 (213)
T ss_pred ceEEEecCCccCHHHHHHHHHHHHHHHhcCCCCCEEEEECCCCCeeCCCCCChhhccCC------CCCCEEEeCCCccee
Confidence 45677889999999999999999999988888999999999999999999998887632 489999999999999
Q ss_pred EeCCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCeEEecC--------CeEeeecceeeeee
Q 027520 85 FHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGD--------RKIGAIGVRIQYGI 156 (222)
Q Consensus 85 yHgPGQLv~YpIl~l~~~~~~~~~yv~~Le~~~i~~l~~~gi~a~~~~~~~~GVwv~~--------~KIasiGv~i~~~v 156 (222)
||||||||+|||+||++++.++++|++.||+++|++|+.|||++ .+.++++||||++ +||||||+++++||
T Consensus 77 yHGPGQlV~YpIl~L~~~~~~v~~yv~~lE~~iI~~l~~~gi~~-~~~~~~~GVWv~~~~~~~~~~~KIaaIGv~v~r~v 155 (213)
T PRK14341 77 YHGPGQRVAYVMLDLKRRRRDVRAFVAALEEWIIATLAAFNIRG-ERREDRVGVWVRRPDKGSGAEDKIAAIGVRLRRWV 155 (213)
T ss_pred EECCCeEEEEEEEEccccCCCHHHHHHHHHHHHHHHHHHhCCce-EEcCCCCeEEecCccCCCCCCCcEEEEeeeEecce
Confidence 99999999999999999999999999999999999999999999 5788999999984 89999999999999
Q ss_pred eeeccccccCCCccccccccCCCCCCCcceeehhhhcCCccccccccccccchhhhhC
Q 027520 157 TSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGNGIYEAVEKPAPHVTYSKEHQ 214 (222)
Q Consensus 157 t~HG~aLNv~~dL~~f~~I~pCGl~~~~vTSl~~~~~~~~~~~~~~~~~~~~f~~~~~ 214 (222)
|+||||||||+||++|+.|+|||++|+.||||++ +|..++.+++++.+...|.+.|+
T Consensus 156 T~HG~ALNv~~dL~~F~~IvPCGl~~~~vTSl~~-~g~~~~~~~v~~~l~~~f~~~f~ 212 (213)
T PRK14341 156 SFHGISINVEPDLSHFSGIVPCGISEHGVTSLVD-LGLPVTMDDVDAALKKAFEKVFG 212 (213)
T ss_pred eccceEEEecCChhhhCcEecCCCCCCcEeeHHH-hCCCCCHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999987 78889999999999999998875
No 5
>PRK14343 lipoate-protein ligase B; Provisional
Probab=100.00 E-value=3.7e-71 Score=478.58 Aligned_cols=207 Identities=28% Similarity=0.477 Sum_probs=192.3
Q ss_pred CCceeEEEEcCccCHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCeeeecCCCCCCCCCCcHHHHhhcCCeEEEeecCCc
Q 027520 3 VPRSLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGD 82 (222)
Q Consensus 3 ~~~~l~v~~lg~~~Y~~~~~~Q~~l~~~~~~~~~~~~lll~eH~PvyT~Gr~~~~~~~l~~~~~l~~~gi~v~~~~RGG~ 82 (222)
+++.+.+++||+++|.++|++|+++++.+..+ .+|+||+||||||||+|++++.++++.+ ..+++|++++|||+
T Consensus 11 ~~~~~~v~~lG~v~Y~~a~~~q~~~~~~~~~~-~~d~llllEHppVyT~G~~~~~~~ll~~-----~~~i~v~~tdRGG~ 84 (235)
T PRK14343 11 AALPVTVRWRGREPYEACFDAMRAFTDARTAD-TPDEIWLVEHPPVYTLGQAGDPAHLLVA-----DSGIPLVKVDRGGQ 84 (235)
T ss_pred cCCceEEEeCCCcCHHHHHHHHHHHHHHHhCC-CCCEEEEECCCCCeeCCCCCChhhccCC-----cCCCCEEEeCCCCc
Confidence 35568999999999999999999999887655 5799999999999999999999888754 34899999999999
Q ss_pred eeEeCCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCeEEec-----CCeEeeecceeeeeee
Q 027520 83 ITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVG-----DRKIGAIGVRIQYGIT 157 (222)
Q Consensus 83 iTyHgPGQLv~YpIl~l~~~~~~~~~yv~~Le~~~i~~l~~~gi~a~~~~~~~~GVwv~-----~~KIasiGv~i~~~vt 157 (222)
+|||||||||+|||+||++++.++++|++.||+++|++|++|||++ .+.++++||||+ ++||||||+++++|||
T Consensus 85 iTyHGPGQLV~YpIl~L~~~~~~v~~yv~~lE~~vI~~l~~~gi~~-~~~~~~~GVwv~~~~~~~~KIaaIGv~v~r~vT 163 (235)
T PRK14343 85 ITYHGPGQVVAYLLLDLRRRKLMVRELVTRIEQAVIDTLAAYNLAS-ERKAGAPGIYVASGPHQGAKIAALGLKIRNGCS 163 (235)
T ss_pred eeEeCCCeEEEEEEEEccccCCCHHHHHHHHHHHHHHHHHHcCCce-eecCCCCeEEEeCCCCCCCeEEEEeeeeeccee
Confidence 9999999999999999999999999999999999999999999999 578899999998 8999999999999999
Q ss_pred eeccccccCCCccccccccCCCCCCCcceeehhhhcCCccccccccccccchhhhhCcee
Q 027520 158 SHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGNGIYEAVEKPAPHVTYSKEHQCHQ 217 (222)
Q Consensus 158 ~HG~aLNv~~dL~~f~~I~pCGl~~~~vTSl~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 217 (222)
+||||||||+||++|+.|+|||++|.+|||| +++|..++.+++++.+...|.+.|++..
T Consensus 164 ~HG~ALNv~~DL~~F~~I~PCGl~~~~vTSL-~~lg~~~~~~~v~~~l~~~f~~~f~~~~ 222 (235)
T PRK14343 164 YHGLSLNVKMDLRPFLAINPCGYAGLETVDM-ASLGVAADWADVAQTLARRLIANLDGAA 222 (235)
T ss_pred ecccEEEeCCCchhhCcEECCCCCCCcEeeH-HHhCCCCCHHHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999999999999 4688889999999999999999887643
No 6
>PRK14344 lipoate-protein ligase B; Provisional
Probab=100.00 E-value=5e-71 Score=474.88 Aligned_cols=205 Identities=29% Similarity=0.481 Sum_probs=189.4
Q ss_pred ceeEEEEcCccCHHHHHHHHHHHHHHHhcC-CCCCEEEEEeCCCeeeecCCCCCCCCCCcHHHHhhcCCeEEEeecCCce
Q 027520 5 RSLQIWRLGIVNYSDALKLQEKLVSDRKIH-KISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDI 83 (222)
Q Consensus 5 ~~l~v~~lg~~~Y~~~~~~Q~~l~~~~~~~-~~~~~lll~eH~PvyT~Gr~~~~~~~l~~~~~l~~~gi~v~~~~RGG~i 83 (222)
-.+.+.++|+++|.+||++|+++++.+.++ ..+|++|+||||||||+|++++.++++.+. ++.+++|++++|||++
T Consensus 17 ~~~~~~~lg~v~Y~~a~~~Q~~~~~~~~~~~~~~d~llllEH~pVyT~G~~~~~~~l~~~~---~~~~~~v~~~~RGG~i 93 (223)
T PRK14344 17 SAILFEPDNIVPFEDAWKWQKEWQQALIEDPSNPQAVWLLEHQLCYTLGRGASEDNLLFSL---NNPPADVFRIDRGGEV 93 (223)
T ss_pred ceEEEecCCccCHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCeeCCCCCChhhccCcc---ccCCCcEEEcCCCcee
Confidence 457788999999999999999999887554 467999999999999999999998887543 2458999999999999
Q ss_pred eEeCCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCeEEecCCeEeeecceeeeeeeeecccc
Q 027520 84 TFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAF 163 (222)
Q Consensus 84 TyHgPGQLv~YpIl~l~~~~~~~~~yv~~Le~~~i~~l~~~gi~a~~~~~~~~GVwv~~~KIasiGv~i~~~vt~HG~aL 163 (222)
|||||||||+|||+||++++.++++|++.||+++|++|++|||++ .+.++++|||++++||||||+++++|||+||+||
T Consensus 94 TyHGPGQLV~YpIl~L~~~~~~v~~yv~~lE~~ii~~l~~~gi~~-~~~~~~~GVWv~~~KIaaIGv~v~r~vT~HG~AL 172 (223)
T PRK14344 94 THHMPGQLVTYLVLDLRRFNKDLNWYLRQLEQVLIDVLADLGIDG-ERLDGLTGVWIGNKKVASIGIGCRRWITQHGFSL 172 (223)
T ss_pred eEECCCcEEEEEEEEccccCCCHHHHHHHHHHHHHHHHHHcCCce-eecCCCCcEEcCCCeEEEEeEeEecceeecceEE
Confidence 999999999999999999999999999999999999999999999 5788999999999999999999999999999999
Q ss_pred ccCCCccccccccCCCCCCCcceeehhhhcCCccccccccccccchhhhhC
Q 027520 164 NIDPDLNYFKHIVPCGIADKDVTSLRRETGNGIYEAVEKPAPHVTYSKEHQ 214 (222)
Q Consensus 164 Nv~~dL~~f~~I~pCGl~~~~vTSl~~~~~~~~~~~~~~~~~~~~f~~~~~ 214 (222)
||++||++|+.|+||||+|+.||||+++ +..++.+++++.....|++.|+
T Consensus 173 Nv~~dL~~F~~IvPCGl~~~~vTSl~~~-~~~~~~~~v~~~l~~~f~~~f~ 222 (223)
T PRK14344 173 NVDCDLEGFNKIVPCGLEGCQVGRLSDW-IPGLNIKEVKPLLKKSLQERFG 222 (223)
T ss_pred ecCCCccccCcEEcCCCCCCcEeeHHHH-cCCCCHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999875 5688888899999899998885
No 7
>COG0321 LipB Lipoate-protein ligase B [Coenzyme metabolism]
Probab=100.00 E-value=3.3e-71 Score=470.92 Aligned_cols=204 Identities=36% Similarity=0.624 Sum_probs=192.9
Q ss_pred ceeEEEEcCccCHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCeeeecCCCCCCCCCCcHHHHhhcCCeEEEeecCCcee
Q 027520 5 RSLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDIT 84 (222)
Q Consensus 5 ~~l~v~~lg~~~Y~~~~~~Q~~l~~~~~~~~~~~~lll~eH~PvyT~Gr~~~~~~~l~~~~~l~~~gi~v~~~~RGG~iT 84 (222)
..+.++.+|+++|.++|+.|+.+.+.+..+..+|++|++|||||||.|++++.++++.+ .++||++++|||++|
T Consensus 9 ~~~~~~~~Gl~~Y~~a~~~m~~~~~~r~~~~~~d~i~lvEHppVyT~G~~~~~e~l~~~------~~ipVv~~~RGGqvT 82 (221)
T COG0321 9 KIILVRELGLVDYQEAWQLMETFTDARADGGTPDEIWLVEHPPVYTAGQAGKAEHLLMP------DDIPVVQTDRGGQVT 82 (221)
T ss_pred cchhhhhcCcccHHHHHHHHHHHHHHhhcCCCCCeEEEEecCCeeecCccCCHhhcccC------CCCCEEEecCCceeE
Confidence 36789999999999999999999999988888999999999999999999999988753 389999999999999
Q ss_pred EeCCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCeEEecC-CeEeeecceeeeeeeeecccc
Q 027520 85 FHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGD-RKIGAIGVRIQYGITSHGLAF 163 (222)
Q Consensus 85 yHgPGQLv~YpIl~l~~~~~~~~~yv~~Le~~~i~~l~~~gi~a~~~~~~~~GVwv~~-~KIasiGv~i~~~vt~HG~aL 163 (222)
||||||+|+|||+||++++.++|+||++||+++|++|+.|||++ .++++.+||||++ +||||||+||+||+|+||+||
T Consensus 83 yHGPGQ~V~Y~ildLkr~~~~vr~~V~~LEqavI~tLa~~~i~~-~~~~~~~GVwV~~~~KIAaiGirirr~vs~HGlAL 161 (221)
T COG0321 83 YHGPGQLVAYPILDLKRPKLDVREYVRALEQAVINTLAEYGIEA-ERRPDRPGVWVEEERKIAAIGIRIRRGVTFHGLAL 161 (221)
T ss_pred EeCCCcEEEEEEEecccccccHHHHHHHHHHHHHHHHHHcCCcc-cccCCCCeEEecCCceEEEEEEEEecccceeeeEE
Confidence 99999999999999999999999999999999999999999999 5889999999996 999999999999999999999
Q ss_pred ccCCCccccccccCCCCCCCcceeehhhhcCCccccccccccccchhhhhCce
Q 027520 164 NIDPDLNYFKHIVPCGIADKDVTSLRRETGNGIYEAVEKPAPHVTYSKEHQCH 216 (222)
Q Consensus 164 Nv~~dL~~f~~I~pCGl~~~~vTSl~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 216 (222)
||++||++|++|+|||+.|..||||+++... ++.+++..++...|++.|+..
T Consensus 162 Nv~~DL~~F~~I~PCG~~~~~~tsl~d~~~~-v~~~~V~~~l~~~~~~~l~~~ 213 (221)
T COG0321 162 NVNMDLSPFNRIVPCGYAGMEVTSLSDLGPP-VTVDEVAKALVAAFAKLLGPK 213 (221)
T ss_pred eccCCchhccceeccccCCCceeEHHHhCCC-CcHHHHHHHHHHHHHHHhCCc
Confidence 9999999999999999999999999987765 888999999999999998864
No 8
>PRK14347 lipoate-protein ligase B; Provisional
Probab=100.00 E-value=1.7e-70 Score=467.83 Aligned_cols=199 Identities=33% Similarity=0.497 Sum_probs=184.6
Q ss_pred eEEEEcCccCHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCeeeecCCCCCCCCCCcHHHHhhcCCeEEEeecCCceeEe
Q 027520 7 LQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFH 86 (222)
Q Consensus 7 l~v~~lg~~~Y~~~~~~Q~~l~~~~~~~~~~~~lll~eH~PvyT~Gr~~~~~~~l~~~~~l~~~gi~v~~~~RGG~iTyH 86 (222)
..+.++|+++|.+||++|+++++++.++..+|+||+||||||||+|++++.++++. ..+++|++|+|||++|||
T Consensus 3 ~~~~~~g~~~Y~~a~~~q~~~~~~~~~~~~~d~llllEH~pVyT~G~~~~~~~ll~------~~~i~v~~t~RGG~vTyH 76 (209)
T PRK14347 3 RFITIPDFADYQVTLKLMEDYVNKVISDHEPEIVYLVEHSEVYTAGTNYKQEELLN------YGDIPVIYTGRGGKFTFH 76 (209)
T ss_pred eEEecCCccCHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCeeCCCCCChhhccc------ccCCcEEEecCCcceEEe
Confidence 45688999999999999999999998888899999999999999999999887753 348999999999999999
Q ss_pred CCCCeEEEEeeecCCC--CCCHHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCeEEec-----CCeEeeecceeeeeeeee
Q 027520 87 GPHQAILYPIISLRDI--GLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVG-----DRKIGAIGVRIQYGITSH 159 (222)
Q Consensus 87 gPGQLv~YpIl~l~~~--~~~~~~yv~~Le~~~i~~l~~~gi~a~~~~~~~~GVwv~-----~~KIasiGv~i~~~vt~H 159 (222)
||||||+|||+||+++ ..++++|++.||+++|++|++|||++ .+.++++||||+ ++||||||+++++|||+|
T Consensus 77 GPGQlV~YpIldL~~~~~~~~v~~yv~~lE~~ii~~l~~~gi~~-~~~~~~~GVWv~~~~~~~~KIaaiGv~v~r~vT~H 155 (209)
T PRK14347 77 GPGQRVIYPILNLASPNRHKDLKLYIKMLEEWIINSLNYFGIKA-YIIKDKVGIWVKVRKDEFAKIAAIGVRVRKWVTYH 155 (209)
T ss_pred CCCcEEEEEEEeccccccCCCHHHHHHHHHHHHHHHHHHcCCce-EEcCCCCEEEEcCCCCCCceEEEEeEEEecceeec
Confidence 9999999999999875 46999999999999999999999999 577899999997 589999999999999999
Q ss_pred ccccccCCCccccccccCCCCCCCcceeehhhhcCCccccccccccccchhhhh
Q 027520 160 GLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGNGIYEAVEKPAPHVTYSKEH 213 (222)
Q Consensus 160 G~aLNv~~dL~~f~~I~pCGl~~~~vTSl~~~~~~~~~~~~~~~~~~~~f~~~~ 213 (222)
|+|||||+||++|+.|+||||+|+.||||++ +|..++.+++++.+...|++.|
T Consensus 156 G~AlNv~~dL~~F~~IvPCGl~~~~vTSl~~-~g~~~~~~~v~~~l~~~f~~~f 208 (209)
T PRK14347 156 GVAINISTDLSKFSGIIPCGLENSLVTSLNQ-LGIHVEMSEFDKIIQTEFNKIF 208 (209)
T ss_pred ceEEEeCCCccccCcEECCCCCCCcEeeHHH-hCCCCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999975 6888889889988888888766
No 9
>PRK14346 lipoate-protein ligase B; Provisional
Probab=100.00 E-value=7.1e-70 Score=468.99 Aligned_cols=199 Identities=29% Similarity=0.487 Sum_probs=185.1
Q ss_pred eEEEEcCccCHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCeeeecCCCCCCCCCCcHHHHhhcCCeEEEeecCCceeEe
Q 027520 7 LQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFH 86 (222)
Q Consensus 7 l~v~~lg~~~Y~~~~~~Q~~l~~~~~~~~~~~~lll~eH~PvyT~Gr~~~~~~~l~~~~~l~~~gi~v~~~~RGG~iTyH 86 (222)
+.+++||+++|.+||++|+++++.+..+ .+|+||+||||||||+|++++.++++.+ .+++|++++|||++|||
T Consensus 3 ~~~~~lG~v~Y~~a~~~q~~~~~~~~~~-~~d~llllEHppVyT~G~~~~~~~ll~~------~~i~v~~tdRGG~iTyH 75 (230)
T PRK14346 3 MDRRMLGRVDYLATVQAMQAFTAERTPE-TPDELWICEHPPVYTQGLAGKADHVLNP------GDIPVVATNRGGQVTYH 75 (230)
T ss_pred EEEEeCCCcCHHHHHHHHHHHHHHhhCC-CCCEEEEEcCCCCeeCCCCCChhhccCC------CCCcEEEeCCCcceeEE
Confidence 6789999999999999999998887544 6899999999999999999998887633 47999999999999999
Q ss_pred CCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCeEEec-------------------------
Q 027520 87 GPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVG------------------------- 141 (222)
Q Consensus 87 gPGQLv~YpIl~l~~~~~~~~~yv~~Le~~~i~~l~~~gi~a~~~~~~~~GVwv~------------------------- 141 (222)
||||||+|||+||++++.++++|++.||+++|++|+.|||++ .+.++++||||+
T Consensus 76 GPGQlV~YpildL~~~~~~vr~yv~~lE~~vI~~l~~~gi~~-~~~~~~~GVWv~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (230)
T PRK14346 76 GPGQVVAYPLIDLRRAGYFVKEYVYRIEEAVIRTLAHFGVTG-HRVAGAPGIYVRLDDPFSHAALPQRPQKRGGGAPQPP 154 (230)
T ss_pred CCCeEEEEEEEeccccCCCHHHHHHHHHHHHHHHHHHhCCce-EEcCCCCEEEEcCCCcccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999 578899999997
Q ss_pred ---CCeEeeecceeeeeeeeeccccccCCCccccccccCCCCCCCcceeehhhhcCCccccccccccccchhhhhC
Q 027520 142 ---DRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGNGIYEAVEKPAPHVTYSKEHQ 214 (222)
Q Consensus 142 ---~~KIasiGv~i~~~vt~HG~aLNv~~dL~~f~~I~pCGl~~~~vTSl~~~~~~~~~~~~~~~~~~~~f~~~~~ 214 (222)
++||||||+++++|||+||+|||||+||++|+.|+||||+|+.||||+ ++|..++.+++++.+...|.+.|+
T Consensus 155 ~~~~~KIaAiGv~v~r~vT~HG~ALNv~~DL~~F~~IvPCGl~~~~vTSL~-~lg~~~~~~~v~~~l~~~f~~~~~ 229 (230)
T PRK14346 155 FRGLGKIAALGIKVSRHCTYHGVALNVAMDLEPFSRINPCGYAGLQTVDLS-TIGVQTTWDEAASVLGQQLARYLA 229 (230)
T ss_pred ccccceEEEEeeEEecceeecceeEEcCCChhhhCcEECCCCCCCceeeHH-HhCCCCCHHHHHHHHHHHHHHHhC
Confidence 269999999999999999999999999999999999999999999997 689899999999988888888763
No 10
>PRK14349 lipoate-protein ligase B; Provisional
Probab=100.00 E-value=1.7e-69 Score=463.97 Aligned_cols=200 Identities=30% Similarity=0.460 Sum_probs=185.8
Q ss_pred EEEcCc-cCHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCeeeecCCCCCCCCCCcHHHHhhcCCeEEEeecCCceeEeC
Q 027520 9 IWRLGI-VNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHG 87 (222)
Q Consensus 9 v~~lg~-~~Y~~~~~~Q~~l~~~~~~~~~~~~lll~eH~PvyT~Gr~~~~~~~l~~~~~l~~~gi~v~~~~RGG~iTyHg 87 (222)
+++++. ++|.+||++|+++++.+..+ .+|+||+||||||||+|+++++++++.+ .+++|++|+|||++||||
T Consensus 2 ~~~~~~~~~Y~~a~~~q~~~~~~~~~~-~~d~llllEH~pVyT~G~~~~~~~ll~~------~~i~vv~t~RGG~iTyHG 74 (220)
T PRK14349 2 IKWLARPADYASVWDAMKAFTAARGPG-TADEIWLCEHAPVYTLGQAGRPEHLLNP------GLIPVVHCDRGGQVTYHG 74 (220)
T ss_pred eeeccCccCHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCCeeCCCCCChhhccCC------CCCcEEEecCCcceEEeC
Confidence 466777 99999999999999987655 5799999999999999999998888632 479999999999999999
Q ss_pred CCCeEEEEeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCc-CCCCCCCCCeEEec-----CCeEeeecceeeeeeeeecc
Q 027520 88 PHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVK-ACPGQKGETGIWVG-----DRKIGAIGVRIQYGITSHGL 161 (222)
Q Consensus 88 PGQLv~YpIl~l~~~~~~~~~yv~~Le~~~i~~l~~~gi~-a~~~~~~~~GVwv~-----~~KIasiGv~i~~~vt~HG~ 161 (222)
|||||+|||+||++++.++++|++.||+++|++|++|||+ + .+.++++||||+ ++||||||+++++|||+||+
T Consensus 75 PGQLV~YpIldL~~~~~~vr~yv~~LE~~~I~~l~~~gi~~a-~~~~~~~GVWv~~~~~~~~KIaaiGv~v~r~vT~HG~ 153 (220)
T PRK14349 75 PGQVLAYTLFDLRRAGLYVREYVDMLEQATLATLRELGLEQA-CRKPGAPGIYVPQPGGELAKIAALGVKVRNGYAYHGL 153 (220)
T ss_pred CCcEEEEEEEEcccCCCCHHHHHHHHHHHHHHHHHHhCCcce-eecCCCCcEEeCCCCCCCceEEEEeeEEecceeecce
Confidence 9999999999999999999999999999999999999999 8 578899999998 48999999999999999999
Q ss_pred ccccCCCccccccccCCCCCCCcceeehhhhcCCccccccccccccchhhhhCcee
Q 027520 162 AFNIDPDLNYFKHIVPCGIADKDVTSLRRETGNGIYEAVEKPAPHVTYSKEHQCHQ 217 (222)
Q Consensus 162 aLNv~~dL~~f~~I~pCGl~~~~vTSl~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 217 (222)
|||||+||++|+.|+||||+|+.||||++ +|..++.+++++.+...|++.|+.+.
T Consensus 154 ALNv~~DL~~F~~IvPCGl~~~~vTSl~~-~g~~~~~~~v~~~l~~~f~~~f~~~~ 208 (220)
T PRK14349 154 ALNIDMDLSPFLGINPCGYEGLRTVDLAA-CGVRTSVERAGELLAAQLARAHGQAV 208 (220)
T ss_pred eEEecCCchhhCcEEcCCCCCCcEeeHHH-hCCCCCHHHHHHHHHHHHHHHhCccc
Confidence 99999999999999999999999999975 78889999999999999999998765
No 11
>TIGR00214 lipB lipoate-protein ligase B. Involved in lipoate biosynthesis as the main determinant of the lipoyl-protein ligase activity required for lipoylation of enzymes such as alpha-ketoacid dehydrogenases. Involved in activation and re-activation (following denaturation) of lipoyl-protein ligases (calcium ion-dependant process).
Probab=100.00 E-value=1.3e-65 Score=430.95 Aligned_cols=177 Identities=32% Similarity=0.558 Sum_probs=162.2
Q ss_pred cCCCCCEEEEEeCCCeeeecCCCCCCCCCCcHHHHhhcCCeEEEeecCCceeEeCCCCeEEEEeeecCCCCCCHHHHHHH
Q 027520 33 IHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEK 112 (222)
Q Consensus 33 ~~~~~~~lll~eH~PvyT~Gr~~~~~~~l~~~~~l~~~gi~v~~~~RGG~iTyHgPGQLv~YpIl~l~~~~~~~~~yv~~ 112 (222)
++..+|+||+||||||||+|++++.++++.+. ...+++|++++|||++|||||||||+|||+||+++++++++|++.
T Consensus 8 ~~~~~d~llllEH~pVyT~G~~~~~~~l~~~~---~~~~~~v~~~~RGG~iTyHGPGQLV~YpIl~L~~~~~~v~~yv~~ 84 (184)
T TIGR00214 8 DRQTLDEIMLVEHYPVYTQGQAGKTEHLLFDP---DIPPAEVVQSERGGQVTYHGPGQQVMYVILDLKRFQLDVRWLVTQ 84 (184)
T ss_pred cCCCCCEEEEECCCCCeeCCCCCChhhccCCc---CCCcceEEEeCCCCeeEEECCCeEEEEEEEEchhcCCCHHHHHHH
Confidence 44578999999999999999999999887432 123567999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCcCCCCCCCCCeEEecCCeEeeecceeeeeeeeeccccccCCCccccccccCCCCCCCcceeehhhh
Q 027520 113 LESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRET 192 (222)
Q Consensus 113 Le~~~i~~l~~~gi~a~~~~~~~~GVwv~~~KIasiGv~i~~~vt~HG~aLNv~~dL~~f~~I~pCGl~~~~vTSl~~~~ 192 (222)
||+++|++|++|||++ .+.++++|||++++||||||++++||||+|||||||++||++|+.|+||||+|++||||+++
T Consensus 85 lE~~~I~~l~~~gi~a-~~~~~~~GVWv~~~KIasIGv~v~r~vt~HG~ALNv~~dL~~F~~I~PCGl~~~~vTSl~~~- 162 (184)
T TIGR00214 85 LEQTVIITLAELGIEG-EPIADATGVWVEGKKVASLGIRVRRGCTFHGLALNINMDLSPFSHINPCGYAGREMGSLNQF- 162 (184)
T ss_pred HHHHHHHHHHHcCCce-EEcCCCCeEEecCCEEEEEEEEEeccEeecceEEEcCCCchHhccEEcCCCCCCcEeeHHHH-
Confidence 9999999999999999 47789999999999999999999999999999999999999999999999999999999864
Q ss_pred cCCccccccccccccchhhhhC
Q 027520 193 GNGIYEAVEKPAPHVTYSKEHQ 214 (222)
Q Consensus 193 ~~~~~~~~~~~~~~~~f~~~~~ 214 (222)
+..++.+++++.....|++.|+
T Consensus 163 ~~~~~~~~v~~~~~~~f~~~f~ 184 (184)
T TIGR00214 163 LPGATVENVAPLLIKAFAELLG 184 (184)
T ss_pred cCCCCHHHHHHHHHHHHHHHhC
Confidence 5778888888888889988874
No 12
>KOG0325 consensus Lipoyltransferase [Energy production and conversion; Coenzyme transport and metabolism]
Probab=100.00 E-value=1.2e-56 Score=380.02 Aligned_cols=212 Identities=43% Similarity=0.716 Sum_probs=193.5
Q ss_pred CCCCceeEEEEcCccCHHHHHHHHHHHHHHHh-----cCCCCCEEEEEeCCCeeeecCCCCCCCCCCcHHHHhhcCCeEE
Q 027520 1 MKVPRSLQIWRLGIVNYSDALKLQEKLVSDRK-----IHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELH 75 (222)
Q Consensus 1 ~~~~~~l~v~~lg~~~Y~~~~~~Q~~l~~~~~-----~~~~~~~lll~eH~PvyT~Gr~~~~~~~l~~~~~l~~~gi~v~ 75 (222)
|.....+.+...|+.+|.++.++|++|++... .....+++++.||+||||+|.+... ..+.++.++.+.|++++
T Consensus 1 ~~~~~~~~~~r~g~~~y~~~~~lq~rlvr~~~~~~~s~~~~~p~il~~eh~PvYT~G~rt~~-~~~~~e~~l~~~ga~~~ 79 (226)
T KOG0325|consen 1 MRLPIGVETVRAGLVHYHRTLALQNRLVRSVKILKKSGTHPIPRILTNEHLPVYTYGCRTLD-FTLYDESRLYKLGAEFH 79 (226)
T ss_pred CcccceEEEEEcccchHHhhhHHHHHHHHHhhhcccccCCCCCEEeecccCCeeeeccccCC-cccchhhhhhhcCceEE
Confidence 66667899999999999999999999999873 3345789999999999999966443 34456788999999999
Q ss_pred EeecCCceeEeCCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCeEEecCCeEeeecceeeee
Q 027520 76 YTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYG 155 (222)
Q Consensus 76 ~~~RGG~iTyHgPGQLv~YpIl~l~~~~~~~~~yv~~Le~~~i~~l~~~gi~a~~~~~~~~GVwv~~~KIasiGv~i~~~ 155 (222)
++.|||++|||||||+++|||+||+.+++++|+||..|| ++|..+||++. ...+++||||+++|||+||++++++
T Consensus 80 ~t~RGG~iTfHGPgQl~~ypIidL~~f~~~~r~~Vs~le----~~c~~~~i~~~-~~t~~tgvwV~d~k~aaiGi~vsr~ 154 (226)
T KOG0325|consen 80 KTERGGLITFHGPGQLVAYPIIDLRHFGFSARCYVSTLE----AACPDFGIKGT-ASTKDTGVWVGDAKIAAIGIRVSRE 154 (226)
T ss_pred EeecCceEEEeCCCceEEEEEEEeeccccchhhHHHHHH----hhccccccccc-ccccccceeecCCeeEEEEEEecCc
Confidence 999999999999999999999999999999999999999 67899999984 5566999999999999999999999
Q ss_pred eeeeccccccCCCccccccccCCCCCCCcceeehhhhcCCccccccccccccchhhhhCceee
Q 027520 156 ITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGNGIYEAVEKPAPHVTYSKEHQCHQV 218 (222)
Q Consensus 156 vt~HG~aLNv~~dL~~f~~I~pCGl~~~~vTSl~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 218 (222)
|||||+||||++||+||++|+|||+.|+.+||+++|.++.++..+.++..+++|+|.|.|...
T Consensus 155 IT~HGlaLN~~tDL~~fnhiv~CGi~~~~vtSi~~e~~~~~~~~~~~~~~l~~l~k~f~~~~~ 217 (226)
T KOG0325|consen 155 ITYHGLALNVNTDLTYFNHIVPCGIYGRGVTSISKEIRRLVTVEESVAIRLVSLTKVFSCMLQ 217 (226)
T ss_pred EeecceEEEeccCcchhhccccceeeccccceehhhhccccchhHhHHHHHHHHHHhhhhhee
Confidence 999999999999999999999999999999999999999999999999999999999998653
No 13
>TIGR00545 lipoyltrans lipoyltransferase and lipoate-protein ligase. One member of this group of proteins is bovine lipoyltransferase, which transfers the lipoyl group from lipoyl-AMP to the specific Lys of lipoate-dependent enzymes. However, it does not first activate lipoic acid with ATP to create lipoyl-AMP and pyrophosphate. Another member of this group, lipoate-protein ligase A from E. coli, catalyzes both the activation and the transfer of lipoate. Homology between the two is full-length, except for the bovine mitochondrial targeting signal, but is strongest toward the N-terminus.
Probab=99.81 E-value=2.8e-19 Score=162.35 Aligned_cols=195 Identities=19% Similarity=0.164 Sum_probs=148.3
Q ss_pred EEEcCccCHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCeeeecCCCCCCCCCCcHHHHhhcCCeEEEeecCCceeEeCC
Q 027520 9 IWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGP 88 (222)
Q Consensus 9 v~~lg~~~Y~~~~~~Q~~l~~~~~~~~~~~~lll~eH~PvyT~Gr~~~~~~~l~~~~~l~~~gi~v~~~~RGG~iTyHgP 88 (222)
++..+..|=..-+++.+.|.+....+..+.+|++++++|++.+|++|+.... ++.+.+++.||+|+|+..||++.||++
T Consensus 3 ~i~~~~~d~~~nlA~ee~Ll~~~~~~~~~~~l~~w~~~p~vviG~~Q~~~~e-v~~~~~~~~gi~vvRR~sGGGaVyhD~ 81 (324)
T TIGR00545 3 ILTSPSNDPYFNLALEEYLFKEFPKTQRGKVLLFWQNANTIVIGRNQNTWAE-VNLKELEEDNVNLFRRFSGGGAVFHDL 81 (324)
T ss_pred EEeCCCCCHHHHHHHHHHHHHccccCCCCcEEEEEcCCCeEEECCCCCHHHH-hCHHHHHHcCCeEEEECCCCceEEEcC
Confidence 4445555666788889999888776666779999999999999999986544 456789999999999999999999999
Q ss_pred CCeEEEEeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCeEEecCCeEeeecceeee-eeeeeccccccCC
Q 027520 89 HQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQY-GITSHGLAFNIDP 167 (222)
Q Consensus 89 GQLv~YpIl~l~~~~~~~~~yv~~Le~~~i~~l~~~gi~a~~~~~~~~GVwv~~~KIasiGv~i~~-~vt~HG~aLNv~~ 167 (222)
|++..-.|.+-.. .....| +.+.+.++++|+.+||++. ..+++++.++|+||++.+.+..+ .+.+||. |-++.
T Consensus 82 g~l~~s~i~~~~~--~~~~~~-~~~~~~i~~aL~~lGi~a~--~~~rnDl~v~gkKisGsAq~~~~~~~l~HGt-lL~~~ 155 (324)
T TIGR00545 82 GNICFSFITPKDG--KEFENA-KIFTRNVIKALNSLGVEAE--LSGRNDLVVDGRKISGSAYYITKDRGFHHGT-LLFDA 155 (324)
T ss_pred CceEEEEEEcCCc--cchhhH-HHHHHHHHHHHHHhCCCeE--ECCCceEEECCEEEEEEeeeeeCCEEEEEEE-EEccC
Confidence 9985555554321 223456 8888999999999999995 34789999999999999998765 6678885 55888
Q ss_pred Cccccccc---cCCCCCC-------CcceeehhhhcCCccccccccccccchhh
Q 027520 168 DLNYFKHI---VPCGIAD-------KDVTSLRRETGNGIYEAVEKPAPHVTYSK 211 (222)
Q Consensus 168 dL~~f~~I---~pCGl~~-------~~vTSl~~~~~~~~~~~~~~~~~~~~f~~ 211 (222)
|++.+... .+-.+.. .+||+|.+.++. ++.++...++..+|++
T Consensus 156 d~~~l~~~L~~~~~k~~skgv~sv~~rv~nl~~~l~~-~~~e~~~~~l~~~f~~ 208 (324)
T TIGR00545 156 DLSKLAKYLNVDKTKIESKGITSVRSRVVNVKEYLPN-ITTEQFLEEMTQAFFT 208 (324)
T ss_pred CHHHHHHhcCCChhhhHhhcccchhhhcccHHHhCCC-CCHHHHHHHHHHHHHh
Confidence 87765322 2234433 366777766654 6666777777777776
No 14
>PRK03822 lplA lipoate-protein ligase A; Provisional
Probab=99.81 E-value=4.4e-19 Score=161.93 Aligned_cols=198 Identities=16% Similarity=0.137 Sum_probs=149.5
Q ss_pred ceeEEEEcCccCHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCeeeecCCCCCCCCCCcHHHHhhcCCeEEEeecCCcee
Q 027520 5 RSLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDIT 84 (222)
Q Consensus 5 ~~l~v~~lg~~~Y~~~~~~Q~~l~~~~~~~~~~~~lll~eH~PvyT~Gr~~~~~~~l~~~~~l~~~gi~v~~~~RGG~iT 84 (222)
..|+++..+..|=.--+++.+.+.+....+ +++|++++++|++.+|++|+.... ++.+.+++.||+|+|+..||++.
T Consensus 2 ~~~~~i~s~~~dp~~NlAlEe~Ll~~~~~~--~~~l~~w~n~p~VvIGr~Qn~~~E-vn~~~~~~~gI~vvRR~SGGGAV 78 (338)
T PRK03822 2 STLRLLISDSYDPWFNLAVEECIFRQMPAT--QRVLFLWRNADTVVIGRAQNPWKE-CNTRRMEEDNVRLARRSSGGGAV 78 (338)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHhcCCCC--CCEEEEEcCCCeEEECCCCCHHHH-hCHHHHHHcCCcEEEECCCCceE
Confidence 356777777777777888888887765433 468999999999999999987654 46788999999999999999999
Q ss_pred EeCCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCeEEec----CCeEeeecceeee-eeeee
Q 027520 85 FHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVG----DRKIGAIGVRIQY-GITSH 159 (222)
Q Consensus 85 yHgPGQLv~YpIl~l~~~~~~~~~yv~~Le~~~i~~l~~~gi~a~~~~~~~~GVwv~----~~KIasiGv~i~~-~vt~H 159 (222)
||++|++-...|.+- ...+.. ...+.++++|+.+||+|. ..++++++++ ++||++.+.+..+ .+.+|
T Consensus 79 yhD~Gnl~~s~i~~~--~~~~~~----~~~~~ii~aL~~lGi~a~--~~~rnDi~v~~~~g~kKisGsAq~~~~~~~l~H 150 (338)
T PRK03822 79 FHDLGNTCFTFMAGK--PEYDKT----ISTSIVLNALNSLGVSAE--ASGRNDLVVKTAEGDRKVSGSAYRETKDRGFHH 150 (338)
T ss_pred EEcCCCcEEEEEeCC--CccCHH----HHHHHHHHHHHHcCCcee--ECCCccEEEecCCCCcEEEEEeeeeeCCeEEEE
Confidence 999999855555442 222222 236799999999999995 3689999995 6999999987654 77788
Q ss_pred ccccccCCCccccc---cccCCCCCC-------CcceeehhhhcCCccccccccccccchhhhhCc
Q 027520 160 GLAFNIDPDLNYFK---HIVPCGIAD-------KDVTSLRRETGNGIYEAVEKPAPHVTYSKEHQC 215 (222)
Q Consensus 160 G~aLNv~~dL~~f~---~I~pCGl~~-------~~vTSl~~~~~~~~~~~~~~~~~~~~f~~~~~~ 215 (222)
|. |-+++|++.+. ...|-.+.. .+||+|.+.++ .++.++...++..+|++.++.
T Consensus 151 GT-lL~~~d~~~l~~~L~~~~~k~~skgv~Sv~srVtnl~~~~~-~~~~e~~~~~l~~~f~~~~~~ 214 (338)
T PRK03822 151 GT-LLLNADLSRLANYLNPDKKKLQAKGITSVRSRVTNLTELLP-GITHEQVCEAITEAFFAHYGE 214 (338)
T ss_pred EE-EEecCCHHHHHHHhCCChhhhhhccccchHhhhccHHHhCC-CCCHHHHHHHHHHHHHHHhCC
Confidence 85 66888877653 222344443 35667776655 377888888888899988764
No 15
>COG0095 LplA Lipoate-protein ligase A [Coenzyme metabolism]
Probab=99.76 E-value=1.5e-17 Score=145.80 Aligned_cols=203 Identities=22% Similarity=0.186 Sum_probs=153.1
Q ss_pred eEEEEcCccC--HHHHHHHHHHHHHHHhcCCCCCEEEEEe-CCCeeeecCCCCCCCCCCcHHHHhhcCCeEEEeecCCce
Q 027520 7 LQIWRLGIVN--YSDALKLQEKLVSDRKIHKISDTLLSLQ-HPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDI 83 (222)
Q Consensus 7 l~v~~lg~~~--Y~~~~~~Q~~l~~~~~~~~~~~~lll~e-H~PvyT~Gr~~~~~~~l~~~~~l~~~gi~v~~~~RGG~i 83 (222)
+++.+.+..+ -...+++++.+.....++. ++++.. ++|++.+|++|+.... ++-+.+++.|++|+|++.||++
T Consensus 2 ~~~~~~~~~~~~~~~n~A~de~ll~~~~~~~---~i~~~~~~~~~v~lG~~q~~~~E-v~~~~~~~~~i~vvRR~sGGGa 77 (248)
T COG0095 2 WRIIDLGIRDFDPAFNLALDEALLRSLSEGG---TLRLYWWNPPTVVLGRFQNTLPE-VNLEYVKEDGIPVVRRPSGGGA 77 (248)
T ss_pred eeEEeccccCCCHHHHHHHHHHHHHhCCCCC---eEEEEEECCCeEEECCccchHhH-hhHHHHHHcCCcEEEEcCCCce
Confidence 5667777644 6677888898887765443 666655 7789999999987653 4668899999999999999999
Q ss_pred eEeCCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCc-CCCCCCCCCeEEecCCeEeeeccee-eeeeeeecc
Q 027520 84 TFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVK-ACPGQKGETGIWVGDRKIGAIGVRI-QYGITSHGL 161 (222)
Q Consensus 84 TyHgPGQLv~YpIl~l~~~~~~~~~yv~~Le~~~i~~l~~~gi~-a~~~~~~~~GVwv~~~KIasiGv~i-~~~vt~HG~ 161 (222)
+||++|++-.-.|++-......+..-.+.+.+.+++++..+|++ +. .++.+++-++|+||++++.+. ++.+-.||.
T Consensus 78 V~hd~g~l~~S~i~~~~~~~~~~~~~~~~~~~~~~~~l~~lgv~~~~--~~~~nDl~v~gkKisG~Aq~~~~~~~l~hgt 155 (248)
T COG0095 78 VFHDLGNLNYSVITPDEGGLESYETLYKFLLQPVIDALRALGVEGAE--CPGRNDLVVDGKKISGSAQRRTKGRILHHGT 155 (248)
T ss_pred EEecCCcEEEEEEECCCCccccHHHHHHHHHHHHHHHHHHcCCCeec--cCCCcceeEcCcEEeeHHHHhhCCcEEEEEE
Confidence 99999977555555554444567777888999999999999999 63 578999999999999999975 458888885
Q ss_pred ccccCCCcccccc---ccCCCCCCCcceeehhhhc-----CCccccccccccccchhhhhCce
Q 027520 162 AFNIDPDLNYFKH---IVPCGIADKDVTSLRRETG-----NGIYEAVEKPAPHVTYSKEHQCH 216 (222)
Q Consensus 162 aLNv~~dL~~f~~---I~pCGl~~~~vTSl~~~~~-----~~~~~~~~~~~~~~~f~~~~~~~ 216 (222)
|-++.|++.+.. +.+-.+.++.++|+.+... ..++.++...++..+|++.++.+
T Consensus 156 -ll~~~d~~~l~~~l~~~~~k~~~k~~~s~~~rv~~l~~~~~~~~~e~~~~l~~~f~~~~~~~ 217 (248)
T COG0095 156 -LLLDIDLELLARVLRVPKEKIKSKGIKSVRERVANLEELLKISVEEFLEALLEAFFKVLGVE 217 (248)
T ss_pred -EEEeCCHHHHHHHhCCChhhhhhcccccHHHhCcchhhccCCCHHHHHHHHHHHHHHhhCCC
Confidence 557777665532 2334455555555443222 55788888888889999988743
No 16
>PRK14061 unknown domain/lipoate-protein ligase A fusion protein; Provisional
Probab=99.76 E-value=1.8e-17 Score=159.27 Aligned_cols=199 Identities=17% Similarity=0.158 Sum_probs=150.6
Q ss_pred ceeEEEEcCccCHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCeeeecCCCCCCCCCCcHHHHhhcCCeEEEeecCCcee
Q 027520 5 RSLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDIT 84 (222)
Q Consensus 5 ~~l~v~~lg~~~Y~~~~~~Q~~l~~~~~~~~~~~~lll~eH~PvyT~Gr~~~~~~~l~~~~~l~~~gi~v~~~~RGG~iT 84 (222)
..|+++..+..|=.--+++.+-+..... ...+++++++++|++.+||+|+.... ++.+.+++.||+|+|+..|||+.
T Consensus 226 ~~m~~i~s~s~dp~~NLAlEE~Ll~~~~--~~~~~l~lW~n~ptVvIGrnQN~~~E-VNl~~~~~~gI~vVRR~SGGGAV 302 (562)
T PRK14061 226 STLRLLISDSYDPWFNLAVEECIFRQMP--ATQRVLFLWRNADTVVIGRAQNPWKE-CNTRRMEEDNVRLARRSSGGGAV 302 (562)
T ss_pred ccEEEEEcCCCCHHHHHHHHHHHHhcCC--CCCCEEEEEcCCCEEEECCCCCchhh-hCHHHHHhcCCcEEEECCCCcEE
Confidence 4577887777776778888888876632 23467888999999999999998755 47789999999999999999999
Q ss_pred EeCCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCeEEe----cCCeEeeecceeee-eeeee
Q 027520 85 FHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWV----GDRKIGAIGVRIQY-GITSH 159 (222)
Q Consensus 85 yHgPGQLv~YpIl~l~~~~~~~~~yv~~Le~~~i~~l~~~gi~a~~~~~~~~GVwv----~~~KIasiGv~i~~-~vt~H 159 (222)
||++|++-.-.|.+- ...+... ..+.++++|+.+||+|. ..+++++.+ +|+||++...++.+ .+.+|
T Consensus 303 YHD~GNlnfSfi~~~--~~~~~~~----~~~~Ii~aL~~LGI~ae--~sgRNDI~v~~~~~GkKISGsAq~~~~~~~lhH 374 (562)
T PRK14061 303 FHDLGNTCFTFMAGK--PEYDKTI----STSIVLNALNALGVSAE--ASGRNDLVVKTAEGDRKVSGSAYRETKDRGFHH 374 (562)
T ss_pred EEcCCceEEEEEeCC--cccchHH----HHHHHHHHHHHcCCCeE--ECCCccEEEeeCCCCcEEEEEeEEEeCCeEEEE
Confidence 999999744444432 2223222 35799999999999995 368999999 69999999987765 77788
Q ss_pred ccccccCCCccccc---cccCCCCCCC-------cceeehhhhcCCccccccccccccchhhhhCce
Q 027520 160 GLAFNIDPDLNYFK---HIVPCGIADK-------DVTSLRRETGNGIYEAVEKPAPHVTYSKEHQCH 216 (222)
Q Consensus 160 G~aLNv~~dL~~f~---~I~pCGl~~~-------~vTSl~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 216 (222)
|. |-+|.|++... ...+-++..+ +||+|++.++ .++.++...++..+|++.++.+
T Consensus 375 GT-LL~d~dl~~L~~~L~~~~~Kl~sKgvkSVrsRVtNL~e~l~-~it~e~f~~~L~~~f~~~~g~~ 439 (562)
T PRK14061 375 GT-LLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLP-GIPHEQVCEAITEAFFAHYGER 439 (562)
T ss_pred EE-EEecCCHHHHHHHhCCCchhhhhhhhhhHHhhceeHHHhCC-CCCHHHHHHHHHHHHHHHcCCC
Confidence 85 55888876553 2334555443 6677776665 3677888888888999887653
No 17
>PF03099 BPL_LplA_LipB: Biotin/lipoate A/B protein ligase family This entry is just a subset of the Pfam family; InterPro: IPR004143 This domain is found in biotin protein ligase, lipoate-protein ligase A and B. Biotin is covalently attached at the active site of certain enzymes that transfer carbon dioxide from bicarbonate to organic acids to form cellular metabolites. Biotin protein ligase (BPL) is the enzyme responsible for attaching biotin to a specific lysine at the active site of biotin enzymes. Each organism probably has only one BPL. Biotin attachment is a two step reaction that results in the formation of an amide linkage between the carboxyl group of biotin and the epsilon-amino group of the modified lysine []. Lipoate-protein ligase A (LPLA) (octanoyltransferase) catalyses the formation of an amide linkage between lipoic acid and a specific lysine residue in lipoate dependent enzymes [].; GO: 0003824 catalytic activity, 0006464 protein modification process; PDB: 2ARU_A 2C8M_B 2C7I_A 3R07_A 2ARS_A 2ART_A 3FJP_A 3EFR_B 2EAY_B 3EFS_B ....
Probab=99.54 E-value=1.2e-14 Score=112.65 Aligned_cols=116 Identities=21% Similarity=0.258 Sum_probs=90.1
Q ss_pred ecCCCCCCCCCCcHHHHhhcCCeEEEeecCCceeEeCCCCeEEEEeeecCCC----CCCHHHHHHHHHHHHHHHHHh---
Q 027520 51 LGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDI----GLGARNYVEKLESTMIEIASL--- 123 (222)
Q Consensus 51 ~Gr~~~~~~~l~~~~~l~~~gi~v~~~~RGG~iTyHgPGQLv~YpIl~l~~~----~~~~~~yv~~Le~~~i~~l~~--- 123 (222)
+|++++......+.+.+++.+++++++.+||+.+||+|++.+.|.++-.... ...+..|+..+...+++.|..
T Consensus 1 ~g~~~~st~~~~~~~~~~~~~v~v~~rqtgG~~~w~~p~g~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (125)
T PF03099_consen 1 IGYFQDSTKEELNQEELKEGGVPVARRQTGGRRVWHSPPGNLYFSLILPPDDPNFPPSDIPSYILLAALAVLEALGEFGP 80 (125)
T ss_dssp EETTBSHHHHHHHHHHHHCTTEEEEEESSSSBEEEEBTTTEEEEEEEEETTTTTHHGGGHHHHHHHHHHHHHHHHHHTTH
T ss_pred CcCeECHHHHHHHHhcCccCCEEEEEEeeCCcceeeeCCcEEEEEEEEccccccccchhhhHHHHHHHHHHHHHhhhhcc
Confidence 4666665411135678899999999999999999999877888888855432 246778877777777777743
Q ss_pred --cCCcCCCCCCCCCeEEecCCeEeeecceeeeeeeeeccccccCCC
Q 027520 124 --YGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPD 168 (222)
Q Consensus 124 --~gi~a~~~~~~~~GVwv~~~KIasiGv~i~~~vt~HG~aLNv~~d 168 (222)
.|++.. .+..++|++++||||+++++..++..+|++++|++.|
T Consensus 81 ~~~~~~~~--~kw~nDi~~~~kKi~Gil~~~~~~~~~~~~~igig~N 125 (125)
T PF03099_consen 81 GEPGIDCF--IKWPNDIYVNGKKIAGILQERRRGGILHHGSIGIGIN 125 (125)
T ss_dssp TTTTSSEE--EETTTEEEETTEEEEEEEEEEETTEEEEEEEEESSEE
T ss_pred ccCCCceE--EeCCCCccCCCcEEEEEeEeeeCCcEEEEEEEEEecC
Confidence 356663 3478999999999999999999999999999998864
No 18
>PRK08330 biotin--protein ligase; Provisional
Probab=99.49 E-value=1e-13 Score=120.46 Aligned_cols=124 Identities=13% Similarity=0.090 Sum_probs=99.5
Q ss_pred cCCceeEeCCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCeEEecCCeEeeecceeeeeeee
Q 027520 79 RGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITS 158 (222)
Q Consensus 79 RGG~iTyHgPGQLv~YpIl~l~~~~~~~~~yv~~Le~~~i~~l~~~gi~a~~~~~~~~GVwv~~~KIasiGv~i~~~vt~ 158 (222)
|.|..++.-||+|.++.+++.......+..+.-...-+++++|+.+|+++. .+..||||++++|||+|.+........
T Consensus 42 R~gr~W~Sp~G~l~~S~~l~~~~~~~~~~~l~~~~~~av~~~l~~~g~~~~--iKWPNDI~~~~kKi~GILiE~~~~~~v 119 (236)
T PRK08330 42 RKGRAWASPEGGLWMSVILKPKVSPEHLPKLVFLGALAVVDTLREFGIEGK--IKWPNDVLVNYKKIAGVLVEGKGDFVV 119 (236)
T ss_pred CCCCeeeCCCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCcc--ccCCCeEEECCeEEEEEeEEEeCCEEE
Confidence 668888888999999998875443333445556677789999999999873 568999999999999999998888899
Q ss_pred eccccccCCCccccccccCCCCCCCcceeehhhhcCCccccccccccccchhhh
Q 027520 159 HGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGNGIYEAVEKPAPHVTYSKE 212 (222)
Q Consensus 159 HG~aLNv~~dL~~f~~I~pCGl~~~~vTSl~~~~~~~~~~~~~~~~~~~~f~~~ 212 (222)
||+.|||+++ .||++.+ .+|||..+++..++.++....+...|.+.
T Consensus 120 iGiGiNv~~~-------~p~~l~~-~atsL~~~~~~~~~~~~l~~~l~~~l~~~ 165 (236)
T PRK08330 120 LGIGLNVNNE-------IPDELRE-TATSMKEVLGREVPLIEVFKRLVENLDRW 165 (236)
T ss_pred EEEEEecCCC-------CCccccc-ccccHHHhhCCCCCHHHHHHHHHHHHHHH
Confidence 9999999976 3999876 69999998888777766666666555543
No 19
>KOG3159 consensus Lipoate-protein ligase A [Coenzyme transport and metabolism]
Probab=99.09 E-value=4.6e-10 Score=100.43 Aligned_cols=182 Identities=16% Similarity=0.151 Sum_probs=125.1
Q ss_pred HHhcCCCCCEEEEEeCCCeeeecCCCCCCCCCCcHHHHhhcCCeEEEeecCCceeEeCCCCeEEEEeeecCCCCCCHHHH
Q 027520 30 DRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNY 109 (222)
Q Consensus 30 ~~~~~~~~~~lll~eH~PvyT~Gr~~~~~~~l~~~~~l~~~gi~v~~~~RGG~iTyHgPGQLv~YpIl~l~~~~~~~~~y 109 (222)
..........|||+...|++-+||+|.+-.. .+-..|++.+|+++|+-.|||..||+=|.|-.-.+-+=.++.. ...
T Consensus 32 ~~~~~~~~~~Ll~w~N~p~vVIGRhQNpw~E-~nv~~~~e~~I~liRR~SGGGTVyHDlGNLN~S~lt~re~~~r--~~n 108 (336)
T KOG3159|consen 32 RHKNGPDKHILLLWINDPCVVIGRHQNPWQE-ANVALLRENNIPLIRRFSGGGTVYHDLGNLNYSLLTNREKFDR--KEN 108 (336)
T ss_pred hhccCCCCeEEEEEeCCceEEEccCCCccee-ccHHHHHhcCCeEEEEecCCceEEEecCceeEEEEccHHHcCc--ccc
Confidence 4445566778999999999999999987543 4567899999999999999999999999995555444333321 111
Q ss_pred HHHHHHHHHHHHH--hcCCcCCCCCCCCCeEEec--CCeEeeecceeeeeeeeeccccccCCCccccccc---cCCCCCC
Q 027520 110 VEKLESTMIEIAS--LYGVKACPGQKGETGIWVG--DRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHI---VPCGIAD 182 (222)
Q Consensus 110 v~~Le~~~i~~l~--~~gi~a~~~~~~~~GVwv~--~~KIasiGv~i~~~vt~HG~aLNv~~dL~~f~~I---~pCGl~~ 182 (222)
+ ..++++|. ++.+++. ..++-++-++ +|||++...+|.|.=.||=..+-++.|+..+... .+-|+..
T Consensus 109 ---l-k~iv~ALn~~e~~v~v~--~nqR~Di~l~~g~rKiSGtA~kI~r~raYHH~T~L~~aDl~~ls~lL~sp~~~~~s 182 (336)
T KOG3159|consen 109 ---L-KIIVRALNGDEPFVKVN--LNQRDDIVLDFGQRKISGTAYKIARNRAYHHCTMLLNADLENLSELLKSPRVNIRS 182 (336)
T ss_pred ---h-HHHHHHhccCCceEeec--ccccccceecccCceeccchhhhcCCceeeeEEeEeccchHHHHhhccCCCCCccc
Confidence 1 24566666 7787774 2344555554 8999999999999888888788899999888644 2355655
Q ss_pred Ccceeehh-----hhc--CCccccccccccccchhhhhCceeeee
Q 027520 183 KDVTSLRR-----ETG--NGIYEAVEKPAPHVTYSKEHQCHQVFH 220 (222)
Q Consensus 183 ~~vTSl~~-----~~~--~~~~~~~~~~~~~~~f~~~~~~~~~~~ 220 (222)
....|+.. .+. ..+.......+..+.|++.|..+-.++
T Consensus 183 ~at~sv~sp~vk~lie~~~~v~~~q~~~av~~~y~~t~~~d~~i~ 227 (336)
T KOG3159|consen 183 KATSSVRSPRVKNLIEKDDFVNVEQSAVAVQEEYKKTFKEDGEIK 227 (336)
T ss_pred cccccccchhhhhhhhhcCcccHhHHHHHHHHHHHHHhcccCCcc
Confidence 55555443 222 223344444555667777777664443
No 20
>PRK05935 biotin--protein ligase; Provisional
Probab=98.43 E-value=1.9e-06 Score=73.13 Aligned_cols=126 Identities=11% Similarity=0.030 Sum_probs=85.7
Q ss_pred cCCceeEeCCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCeEEecCCeEeeecceee----e
Q 027520 79 RGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQ----Y 154 (222)
Q Consensus 79 RGG~iTyHgPGQLv~YpIl~l~~~~~~~~~yv~~Le~~~i~~l~~~gi~a~~~~~~~~GVwv~~~KIasiGv~i~----~ 154 (222)
|.|..++.-||.|..-.++..+....++......---++.++++.++++. ...+-.|+||++++|||+|=+... .
T Consensus 44 R~GR~W~Sp~G~L~~Si~l~~~~~~~~~~~~~~l~~~av~~~l~~~~~~~-~~iKWPNDI~~~~kKi~GILiE~~~~~~~ 122 (190)
T PRK05935 44 KFGKSWHSSDQDLLASFCFFITVLNIDVSLLFRLGTEAVMRLGEDLGITE-AVIKWPNDVLVHGEKLCGVLCETIPVKGG 122 (190)
T ss_pred CCCCeeeCCCCCeEEEEEEccCCCCcCHHHHHHHHHHHHHHHHHHhCCcc-ccccCCCeEEECCcEEEEEEEeccccCCC
Confidence 67888888899877777775544334443333222236778888888753 346789999999999999877642 2
Q ss_pred eeeeeccccccCCCccccccccCCCCCCCcceeehhhhcCCccccccccccccchhh
Q 027520 155 GITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGNGIYEAVEKPAPHVTYSK 211 (222)
Q Consensus 155 ~vt~HG~aLNv~~dL~~f~~I~pCGl~~~~vTSl~~~~~~~~~~~~~~~~~~~~f~~ 211 (222)
....=|+.+||+.+.+.+. . + ...+|||..+.+..++........+..|.+
T Consensus 123 ~~vVIGIGINv~~~~~~~~---~--~-~~~atsL~~~~~~~~~~~~l~~~l~~~l~~ 173 (190)
T PRK05935 123 LGVILGIGVNGNTTKDELL---G--I-DQPATSLQELLGHPIDLEEQRERLIKHIKH 173 (190)
T ss_pred cEEEEEEeEecCCCchhcc---c--c-CCCcccHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 3467899999998754432 1 2 246899999888877776665555544443
No 21
>COG0340 BirA Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism]
Probab=98.07 E-value=9.5e-06 Score=71.15 Aligned_cols=125 Identities=14% Similarity=0.059 Sum_probs=87.1
Q ss_pred ecCCceeEeCCC-CeEEEEeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCeEEecCCeEeeecceeee--
Q 027520 78 QRGGDITFHGPH-QAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQY-- 154 (222)
Q Consensus 78 ~RGG~iTyHgPG-QLv~YpIl~l~~~~~~~~~yv~~Le~~~i~~l~~~gi~a~~~~~~~~GVwv~~~KIasiGv~i~~-- 154 (222)
-|.|..++.-|| +|..-.++........+..+--..--++.++|+++++++ ..+-.|+|++++||+|+|=+....
T Consensus 35 GR~GR~W~Sp~G~~l~~S~~l~~~~~~~~~~~lsl~~g~av~~al~~~~~~~--~iKWPNDv~~~~kKl~GIL~E~~~~~ 112 (238)
T COG0340 35 GRRGRKWSSPKGGGLYMSLLLRPDLPPAELPSLSLVAGLAVAEALRKFGIDV--RIKWPNDVLLNGKKLAGILVEAVGDE 112 (238)
T ss_pred CCCCCcccCCCCCCEEEEEEEcCCcChhhcchhHHHHHHHHHHHHHHhCccc--CccCCcceeECCcceEEEEEeeeecC
Confidence 367888888887 776666664433311222233333338899999999877 367899999999999999887654
Q ss_pred ---eeeeeccccccCCCccccccccCCCCCCCcceeehhhhcCCccccccccccccchhh
Q 027520 155 ---GITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGNGIYEAVEKPAPHVTYSK 211 (222)
Q Consensus 155 ---~vt~HG~aLNv~~dL~~f~~I~pCGl~~~~vTSl~~~~~~~~~~~~~~~~~~~~f~~ 211 (222)
....=|+.+||+.....|..| +...|||..+. ..++.......++..|.+
T Consensus 113 ~~~~~~viGIGINv~~~~~~~~~i------~~~atsL~~~~-~~~~r~~l~~~ll~~l~~ 165 (238)
T COG0340 113 NGLLAVVVGIGINVNNPPPDFEDI------GQPATSLQEEG-EEIDREELLAKLLKELEK 165 (238)
T ss_pred CCceEEEEEEEEeeccCCcchhhh------hhhhhhHHhhh-CCCCHHHHHHHHHHHHHH
Confidence 356889999999998766321 35799999877 666666655555554443
No 22
>TIGR00121 birA_ligase birA, biotin-[acetyl-CoA-carboxylase] ligase region. The protein name suggests that this enzyme transfers biotin only to acetyl-CoA-carboxylase but it also transfers the biotin moiety to other proteins. The apparent orthologs among the eukaryotes are larger proteins that contain a single copy of this domain.
Probab=97.99 E-value=3.3e-05 Score=67.07 Aligned_cols=122 Identities=15% Similarity=0.112 Sum_probs=79.4
Q ss_pred cCCceeEeCCCCeEEEEeeecCCCC--CCHHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCeEEecCCeEeeecceeee--
Q 027520 79 RGGDITFHGPHQAILYPIISLRDIG--LGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQY-- 154 (222)
Q Consensus 79 RGG~iTyHgPGQLv~YpIl~l~~~~--~~~~~yv~~Le~~~i~~l~~~gi~a~~~~~~~~GVwv~~~KIasiGv~i~~-- 154 (222)
|.|..++--||.|.+-.++...... ...-.++-. -++.++|+.++++. ..+-.|+|+++++|||+|=+....
T Consensus 40 R~gr~W~Sp~g~l~~S~~l~~~~~~~~~~~ls~~~~--lAv~~al~~~~~~~--~iKWPNDI~~~~kKi~GIL~E~~~~~ 115 (237)
T TIGR00121 40 RRGRKWLSPEGGLYFSLILRPDLPKSPAPGLTLVAG--IAIAEVLKELGDQV--QVKWPNDILLKDKKLGGILTELTGKE 115 (237)
T ss_pred CCCCcccCCCCceEEEEEECCCCChhHhhhhHHHHH--HHHHHHHHHhCCCC--CCcCCceEEECCeEEEEEEEEcccCC
Confidence 6677777888876555555432110 111122223 36778898888665 367899999999999999776432
Q ss_pred ---eeeeeccccccCCCccccccccCCCCCCCcceeehhhhcCCccccccccccccchhh
Q 027520 155 ---GITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGNGIYEAVEKPAPHVTYSK 211 (222)
Q Consensus 155 ---~vt~HG~aLNv~~dL~~f~~I~pCGl~~~~vTSl~~~~~~~~~~~~~~~~~~~~f~~ 211 (222)
....=|+.+||+.+- .|..+. ..+||+..+.+..++......+.+..|.+
T Consensus 116 ~~~~~vviGIGiNv~~~~------~~~~~~-~~a~sl~~~~~~~~~~~~ll~~l~~~l~~ 168 (237)
T TIGR00121 116 NRADYVVIGIGINVQNRK------PAESLR-EQAISLSEEAGIDLDRGELIEGFLRNFEE 168 (237)
T ss_pred CCcCEEEEEEEEccCCCC------Cchhhc-ccceehHHhhCCCCCHHHHHHHHHHHHHH
Confidence 346789999998641 244443 46889998888777765555555444443
No 23
>PTZ00275 biotin-acetyl-CoA-carboxylase ligase; Provisional
Probab=97.77 E-value=0.00013 Score=65.54 Aligned_cols=108 Identities=12% Similarity=0.135 Sum_probs=71.8
Q ss_pred CCceeEeCCCCeEEEEeeecCCCCCCHHHHHHH-HHHHHHHHHHhcCCcCCCCCCCCCeEEecCCeEeeecceee-----
Q 027520 80 GGDITFHGPHQAILYPIISLRDIGLGARNYVEK-LESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQ----- 153 (222)
Q Consensus 80 GG~iTyHgPGQLv~YpIl~l~~~~~~~~~yv~~-Le~~~i~~l~~~gi~a~~~~~~~~GVwv~~~KIasiGv~i~----- 153 (222)
.|..++.-||.|.+..++..+......-.++.. .--+++++|+.++++. ..+..|+|+++++|||+|=+...
T Consensus 71 ~gR~W~Sp~G~L~~S~~l~~~~~~~~~~~~Lsl~~alAv~~~L~~~~~~~--~IKWPNDI~~~~kKiaGILiE~~~~~~~ 148 (285)
T PTZ00275 71 QDRIWLSEKGNLFTTFVFLWNRNDIEKVKYLAQTCTVAISKTLEYFHLVT--QIKWINDVLVNYKKIAGCLVHLYYLDDF 148 (285)
T ss_pred CCCEEECCCCceEEEEEEecCCcCHhHhHHHHHHHHHHHHHHHHHhCCce--eEECCCccccCCcEEEEEEEeeeecccc
Confidence 388888889988777777543322111112222 2226788898899876 36789999999999999877643
Q ss_pred ------eeeeeeccccccCCCccccccccCCCCCCCcceeehhhhcCCc
Q 027520 154 ------YGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGNGI 196 (222)
Q Consensus 154 ------~~vt~HG~aLNv~~dL~~f~~I~pCGl~~~~vTSl~~~~~~~~ 196 (222)
.....=|+.|||+.. .| |. .....+|||..+++..+
T Consensus 149 ~~~~~~~~~vViGIGINvn~~--~~----~~-~~~~~atSL~~~~~~~~ 190 (285)
T PTZ00275 149 PNLNSRYVCVMVGIGINVTLE--DK----HN-LLNNNYTSIKKELQRDF 190 (285)
T ss_pred ccccCceeEEEEEEEEecCCC--CC----cc-cccCCcccHHHHhCccc
Confidence 134778999999863 22 11 22246799998876544
No 24
>PRK11886 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor; Provisional
Probab=97.62 E-value=0.00024 Score=64.26 Aligned_cols=123 Identities=20% Similarity=0.154 Sum_probs=77.9
Q ss_pred ecCCceeEeCCCC-eEEEEeeecCCCCCCH--HHHHHHHHHHHHHHHHhcCCcCCCCCCCCCeEEecCCeEeeecceeee
Q 027520 78 QRGGDITFHGPHQ-AILYPIISLRDIGLGA--RNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQY 154 (222)
Q Consensus 78 ~RGG~iTyHgPGQ-Lv~YpIl~l~~~~~~~--~~yv~~Le~~~i~~l~~~gi~a~~~~~~~~GVwv~~~KIasiGv~i~~ 154 (222)
-|.|..++--||. |.+-.++......... -.++-. -++.++|+.++... ...+-.|+|+++++|||+|=+....
T Consensus 116 GR~gr~W~Sp~g~~L~~S~~~~~~~~~~~~~~l~l~~~--~av~~al~~~~~~~-~~iKWPNDI~~~~kKl~GIL~E~~~ 192 (319)
T PRK11886 116 GRRGRQWFSPFGGNLYLSLYWRLNQGPAQAMGLSLVVG--IAIAEALRRLGAID-VGLKWPNDIYLNDRKLAGILVELSG 192 (319)
T ss_pred CCCCCcccCCCCCCEEEEEEeCCCCChHHHhhHHHHHH--HHHHHHHHHhcCCC-cceeCCceeeECCeeEEEEEEEecc
Confidence 3888888888895 8777777543110011 112222 36778888887533 2467899999999999998776431
Q ss_pred -----eeeeeccccccCCCccccccccCCCCCCCcceeehhhhcCCccccccccccccchh
Q 027520 155 -----GITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGNGIYEAVEKPAPHVTYS 210 (222)
Q Consensus 155 -----~vt~HG~aLNv~~dL~~f~~I~pCGl~~~~vTSl~~~~~~~~~~~~~~~~~~~~f~ 210 (222)
....=|+.|||+.+. | |..+.+...||+..+ +..++.+......+..|.
T Consensus 193 ~~~~~~~~viGIGiNv~~~~--~----~~~~~~~~~~sl~~~-~~~~~~~~l~~~l~~~~~ 246 (319)
T PRK11886 193 ETGDAAHVVIGIGINVAMPD--F----PEELIDQPWSDLQEA-GPTIDRNQLAAELIKQLR 246 (319)
T ss_pred CCCCccEEEEEEEEccCCCC--C----chhhhccceeeHhhc-CCCCCHHHHHHHHHHHHH
Confidence 246789999998752 1 222223567898765 666665555555444443
No 25
>PTZ00276 biotin/lipoate protein ligase; Provisional
Probab=97.58 E-value=0.00023 Score=62.45 Aligned_cols=87 Identities=15% Similarity=0.090 Sum_probs=56.4
Q ss_pred cCCceeEeCCCCeEEEEeeecCCCCCC---HHHHHHHHHHHHHHHHHhc--CCcCCCCCCCCCeEEecCCeEeeecceee
Q 027520 79 RGGDITFHGPHQAILYPIISLRDIGLG---ARNYVEKLESTMIEIASLY--GVKACPGQKGETGIWVGDRKIGAIGVRIQ 153 (222)
Q Consensus 79 RGG~iTyHgPGQLv~YpIl~l~~~~~~---~~~yv~~Le~~~i~~l~~~--gi~a~~~~~~~~GVwv~~~KIasiGv~i~ 153 (222)
|.|..++.-||.|..-.+++......+ .-.++-.+ ++.++++.+ +++.. .+-.|+|++++||||+|=+.-.
T Consensus 47 R~gR~W~Sp~g~l~~S~~l~~~~~~~~~~~~lsl~~al--av~~al~~~~~~~~~~--iKWPNDI~~~~kKiaGILiE~~ 122 (245)
T PTZ00276 47 TGGRTWTSPKGNMYFTLCIPQKGVPPELVPVLPLITGL--ACRAAIMEVLHGAAVH--TKWPNDIIYAGKKIGGSLIESE 122 (245)
T ss_pred CCCCcccCCCCCeEEEEEECCCccChhHhhHHHHHHHH--HHHHHHHHhccCCceE--EEcCCeeEECCcEEEEEEEccc
Confidence 556677777786655555533222221 11222222 456677665 67663 6789999999999999887655
Q ss_pred eeeeeeccccccCCCc
Q 027520 154 YGITSHGLAFNIDPDL 169 (222)
Q Consensus 154 ~~vt~HG~aLNv~~dL 169 (222)
.....=|+.+||+.+.
T Consensus 123 ~~~vvIGIGINv~~~~ 138 (245)
T PTZ00276 123 GEYLIIGIGMNIEVAP 138 (245)
T ss_pred CCEEEEEEEEeeCCCC
Confidence 4456789999998753
No 26
>PRK08477 biotin--protein ligase; Provisional
Probab=96.88 E-value=0.0056 Score=52.84 Aligned_cols=87 Identities=14% Similarity=0.093 Sum_probs=55.9
Q ss_pred cCCceeEeCCCCeEEEEeeecCCCCCC--H--HHHHHHHHHHHHHHHHhcCCcCCCCCCCCCeEEecCCeEeeecceeee
Q 027520 79 RGGDITFHGPHQAILYPIISLRDIGLG--A--RNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQY 154 (222)
Q Consensus 79 RGG~iTyHgPGQLv~YpIl~l~~~~~~--~--~~yv~~Le~~~i~~l~~~gi~a~~~~~~~~GVwv~~~KIasiGv~i~~ 154 (222)
|.|..++--||.|..-.+++....... . -..+-. -++.++++.+|++. ..+-.|+|+++++|||+|=+....
T Consensus 42 R~gR~W~Sp~G~L~~S~~l~~~~~~~~~~~~~lsl~~~--~av~~~l~~~~~~~--~iKWPNDI~~~~kKi~GIL~E~~~ 117 (211)
T PRK08477 42 SRGNSWEGKKGNLFFSFALKESDLPKDLPLQSSSIYFG--FLLKEVLKELGSKV--WLKWPNDLYLDDKKIGGVITNKIK 117 (211)
T ss_pred CCCCcccCCCCCeEEEeecCCCcchhhhhhHHHHHHHH--HHHHHHHHHhCCCe--EEcCCCeeEECCcEEEEEEEeecC
Confidence 556666666776655544433221111 1 012222 25677888888876 367899999999999999877544
Q ss_pred eeeeeccccccCCCc
Q 027520 155 GITSHGLAFNIDPDL 169 (222)
Q Consensus 155 ~vt~HG~aLNv~~dL 169 (222)
....=|+.+||+...
T Consensus 118 ~~vviGiGiNv~~~p 132 (211)
T PRK08477 118 NFIVCGIGLNLKFSP 132 (211)
T ss_pred CeEEEEEEEeeCCCC
Confidence 446679999998643
No 27
>PRK13325 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/pantothenate kinase; Reviewed
Probab=96.55 E-value=0.0078 Score=59.30 Aligned_cols=88 Identities=16% Similarity=0.080 Sum_probs=59.2
Q ss_pred ecCCceeEeCCCC-eEEEEeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCeEEecCCeEeeecceeee--
Q 027520 78 QRGGDITFHGPHQ-AILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQY-- 154 (222)
Q Consensus 78 ~RGG~iTyHgPGQ-Lv~YpIl~l~~~~~~~~~yv~~Le~~~i~~l~~~gi~a~~~~~~~~GVwv~~~KIasiGv~i~~-- 154 (222)
-|.|..++.-||. |..-.++........+..+--..--++.++|+.+|++. ..+-.|+|++++||||+|=+....
T Consensus 123 GRrGR~W~Sp~G~~Ly~S~~l~~~~~~~~~~~Lsl~vgvAv~~aL~~~g~~v--~lKWPNDIl~~gkKlaGILiE~~~~~ 200 (592)
T PRK13325 123 GRQGRKWSHRLGECLMFSFGWVFDRPQYELGSLSPVAAVACRRALSRLGLKT--QIKWPNDLVVGRDKLGGILIETVRTG 200 (592)
T ss_pred CCCCCcccCCCCCcEEEEeeecCCCChhhhhhHHHHHHHHHHHHHHHcCCCc--eEeCcceEEECCceEEEEEEeeeecC
Confidence 4888888888895 76666664322111111111112226788999999876 367899999999999999887652
Q ss_pred --eeeeeccccccCC
Q 027520 155 --GITSHGLAFNIDP 167 (222)
Q Consensus 155 --~vt~HG~aLNv~~ 167 (222)
....=|+.|||+.
T Consensus 201 ~~~~vVIGIGINv~~ 215 (592)
T PRK13325 201 GKTVAVVGIGINFVL 215 (592)
T ss_pred CCcEEEEEEEEeeCC
Confidence 1356799999974
No 28
>PRK06955 biotin--protein ligase; Provisional
Probab=96.25 E-value=0.02 Score=51.72 Aligned_cols=87 Identities=16% Similarity=0.187 Sum_probs=57.2
Q ss_pred ecCCceeEeCCCC-eEEEEeeecCCCC--CCHHHHHHHHHHHHHHHHHhc----CCcCCCCCCCCCeEEecCCeEeeecc
Q 027520 78 QRGGDITFHGPHQ-AILYPIISLRDIG--LGARNYVEKLESTMIEIASLY----GVKACPGQKGETGIWVGDRKIGAIGV 150 (222)
Q Consensus 78 ~RGG~iTyHgPGQ-Lv~YpIl~l~~~~--~~~~~yv~~Le~~~i~~l~~~----gi~a~~~~~~~~GVwv~~~KIasiGv 150 (222)
-|.|..++--||. |.+-.++...... ...-.++-.+ ++.++|+.+ +++. ..+-.|+|+++++|||+|=+
T Consensus 78 GR~GR~W~Sp~G~~L~~Si~l~~~~~~~~~~~Lsl~~gl--Av~~al~~~~~~~~~~~--~iKWPNDIl~~gkKiaGILi 153 (300)
T PRK06955 78 GRQGRPWFAQPGNALLFSVACVLPRPVAALAGLSLAVGV--ALAEALAALPAALGQRI--ALKWPNDLLIAGRKLAGILI 153 (300)
T ss_pred CCCcCcccCCCCCcEEEEeEecCCCChHHhhhHHHHHHH--HHHHHHHHhhcccCCce--eeeCCceeeECCcEEEEEEE
Confidence 4889999999995 7555555433110 1111122222 556677776 4555 36789999999999999887
Q ss_pred eee---e--eeeeeccccccCCC
Q 027520 151 RIQ---Y--GITSHGLAFNIDPD 168 (222)
Q Consensus 151 ~i~---~--~vt~HG~aLNv~~d 168 (222)
... . ....=|+.|||+.+
T Consensus 154 E~~~~~~~~~~vVIGIGINv~~~ 176 (300)
T PRK06955 154 ETVWATPDATAVVIGIGLNVRRA 176 (300)
T ss_pred EcccCCCCccEEEEEEEEeeCCC
Confidence 642 1 24678999999865
No 29
>KOG0325 consensus Lipoyltransferase [Energy production and conversion; Coenzyme transport and metabolism]
Probab=92.27 E-value=0.083 Score=45.89 Aligned_cols=31 Identities=13% Similarity=0.095 Sum_probs=27.3
Q ss_pred cCCeEEEeecCCceeEeCCCCeEEEEeeecCC
Q 027520 70 LGAELHYTQRGGDITFHGPHQAILYPIISLRD 101 (222)
Q Consensus 70 ~gi~v~~~~RGG~iTyHgPGQLv~YpIl~l~~ 101 (222)
..+.++.+.+|+.||||| ++|.+||.+...+
T Consensus 142 ~k~aaiGi~vsr~IT~HG-laLN~~tDL~~fn 172 (226)
T KOG0325|consen 142 AKIAAIGIRVSREITYHG-LALNVNTDLTYFN 172 (226)
T ss_pred CeeEEEEEEecCcEeecc-eEEEeccCcchhh
Confidence 368899999999999999 9999999887644
No 30
>KOG1536 consensus Biotin holocarboxylase synthetase/biotin-protein ligase [Coenzyme transport and metabolism]
Probab=85.66 E-value=2.5 Score=41.54 Aligned_cols=101 Identities=22% Similarity=0.241 Sum_probs=66.4
Q ss_pred eecCCceeEeCCCCeEEEEeeec--CCCCCCHHHHHHHHHHH-HHHHHHh---c-CCcCCCCCCCCCeEEecC-CeEeee
Q 027520 77 TQRGGDITFHGPHQAILYPIISL--RDIGLGARNYVEKLEST-MIEIASL---Y-GVKACPGQKGETGIWVGD-RKIGAI 148 (222)
Q Consensus 77 ~~RGG~iTyHgPGQLv~YpIl~l--~~~~~~~~~yv~~Le~~-~i~~l~~---~-gi~a~~~~~~~~GVwv~~-~KIasi 148 (222)
+.|||.++.---|-+..-+++.. +.+...+--|+..|--+ +++.++. | .|+. +++..+++|+.+ -||++|
T Consensus 425 RGRGgN~WlsP~G~~~~sf~ism~~ksr~~~~i~~~~~l~~~~~v~~~~~~pGy~dIpv--rIKWPNDlY~~~~lKvgGi 502 (649)
T KOG1536|consen 425 RGRGGNVWLSPKGCAMSSFTISMPLKSRVVPLIPFVQHLALVAVVEAVRYAPGYPDIPV--RIKWPNDLYVNGYLKVGGI 502 (649)
T ss_pred ccCCCCeeecCcceEeEEEEEEeecccccccchHHHHHHHHHHHHHHHhcCCCCCCCce--eeecCccceeeeccccceE
Confidence 45899988887788888888865 43334444555444322 3333332 2 4666 367899999998 899998
Q ss_pred ccee--e--eeeeeeccccccCCCccccccccCCCCCCCcceeehhhhc
Q 027520 149 GVRI--Q--YGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETG 193 (222)
Q Consensus 149 Gv~i--~--~~vt~HG~aLNv~~dL~~f~~I~pCGl~~~~vTSl~~~~~ 193 (222)
=+.. + ..-.+-|..+||++| ..-|||.+.+.
T Consensus 503 Lv~st~r~n~f~v~iGCGiNVtN~--------------~PT~cLN~ll~ 537 (649)
T KOG1536|consen 503 LVTSTYRSNKFNVSIGCGINVTND--------------GPTTCLNDLLD 537 (649)
T ss_pred EEEeeecCceEEEEEeeeeEecCC--------------CCceeHHHHHH
Confidence 7642 2 255667888888887 35677776554
No 31
>PF04017 DUF366: Domain of unknown function (DUF366); InterPro: IPR007162 This is an archaeal family of unknown function.; PDB: 2DDZ_E.
Probab=61.57 E-value=17 Score=30.82 Aligned_cols=91 Identities=21% Similarity=0.321 Sum_probs=43.5
Q ss_pred eEEEEeeecCCC-CCCHHHHH--HHHHHHHHHHHHhcCCcCCCCCCCCCeEEecCCeEee-ecceeeeeeeeeccccccC
Q 027520 91 AILYPIISLRDI-GLGARNYV--EKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGA-IGVRIQYGITSHGLAFNID 166 (222)
Q Consensus 91 Lv~YpIl~l~~~-~~~~~~yv--~~Le~~~i~~l~~~gi~a~~~~~~~~GVwv~~~KIas-iGv~i~~~vt~HG~aLNv~ 166 (222)
-+.-+|+..-.. ++. ..|. |.|-..+-+.|.++|++.. | .-.++++++||++- |...-.-..-.| +++||.
T Consensus 63 dmlhFIvEhFD~~dl~-~~~~rQRLlv~i~kE~L~~~gv~~~-R--~GDDLy~~~~KLSVSIAt~s~vS~kIH-~GiNV~ 137 (183)
T PF04017_consen 63 DMLHFIVEHFDSPDLK-LAYLRQRLLVAIIKEVLEEYGVKLR-R--EGDDLYVNGRKLSVSIATASPVSTKIH-FGINVS 137 (183)
T ss_dssp EEEEEEEEE-S---HH-HHHHHHHHHHHHHHHHHHTTT--EE-E--ETTEEEETTEE-EEEEEEEETTEEEEE-EEEESS
T ss_pred cceEEEEeeCCCCcHH-HHHHHHHHHHHHHHHHHHhcCCcee-e--cccceeECCCEEEEEEEecCcchheEE-EeEeec
Confidence 456677643222 221 2343 2344445568899999983 4 45899999999753 322111133334 579999
Q ss_pred CCccccccccCCCCCCCcceeeh
Q 027520 167 PDLNYFKHIVPCGIADKDVTSLR 189 (222)
Q Consensus 167 ~dL~~f~~I~pCGl~~~~vTSl~ 189 (222)
.+=.+ +..-||.+.++....
T Consensus 138 ~~g~p---V~aigL~dlgi~~~~ 157 (183)
T PF04017_consen 138 SEGTP---VPAIGLEDLGIEDID 157 (183)
T ss_dssp -TT-----S-B--TTTTT--HH-
T ss_pred ccCcc---ccccCHHHcCCccHH
Confidence 97555 333566665555443
No 32
>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B.
Probab=59.92 E-value=5.9 Score=22.45 Aligned_cols=12 Identities=25% Similarity=0.742 Sum_probs=9.5
Q ss_pred eeEeCCCCeEEE
Q 027520 83 ITFHGPHQAILY 94 (222)
Q Consensus 83 iTyHgPGQLv~Y 94 (222)
+|||||+++-+-
T Consensus 4 v~y~G~~~v~ve 15 (23)
T PF13823_consen 4 VVYHGPKDVRVE 15 (23)
T ss_dssp EEEEETTEEEEE
T ss_pred eEEeCCCceEEE
Confidence 699999987543
No 33
>COG2029 Uncharacterized conserved protein [Function unknown]
Probab=56.17 E-value=22 Score=30.02 Aligned_cols=51 Identities=20% Similarity=0.337 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhcCCcCCCCCCCCCeEEecCCeEeeecceeeeee--eeeccccccCCC
Q 027520 113 LESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGI--TSHGLAFNIDPD 168 (222)
Q Consensus 113 Le~~~i~~l~~~gi~a~~~~~~~~GVwv~~~KIasiGv~i~~~v--t~HG~aLNv~~d 168 (222)
|--.+.+.|..+|+++. | .-.+++++|||+.-- +.....+ -.| +.+||.+.
T Consensus 90 lv~i~~E~l~~~gv~~~-R--eGDDly~~grKLtVs-Iat~s~vs~kiH-lGiNV~t~ 142 (189)
T COG2029 90 LVAILKEVLEKLGVDLS-R--EGDDLYVEGRKLTVS-IATVSPVSSKIH-LGINVKTE 142 (189)
T ss_pred HHHHHHHHHHHhCCccc-c--cCCceeecCcEEEEE-EEecCCcceeEE-EeEeeecc
Confidence 44445667888999993 4 458999999997531 2222222 222 35777765
No 34
>PF09322 DUF1979: Domain of unknown function (DUF1979); InterPro: IPR015401 This N-terminal domain is functionally uncharacterised and found in various Oryza sativa (Rice) mutator-like transposases.
Probab=49.29 E-value=14 Score=25.35 Aligned_cols=38 Identities=18% Similarity=0.201 Sum_probs=22.0
Q ss_pred eEeCCCCeEE--------EEeeecCCCCCCHHHHHHHHHHHHHHHH
Q 027520 84 TFHGPHQAIL--------YPIISLRDIGLGARNYVEKLESTMIEIA 121 (222)
Q Consensus 84 TyHgPGQLv~--------YpIl~l~~~~~~~~~yv~~Le~~~i~~l 121 (222)
.|||||.+-. ++|+.-+.........+..+..++++.+
T Consensus 9 ~~hg~GNvR~Gp~GvdLs~Fi~~~rGIdrpAERs~~si~~WLmRG~ 54 (58)
T PF09322_consen 9 IYHGEGNVRYGPTGVDLSEFIVTSRGIDRPAERSVPSIKGWLMRGF 54 (58)
T ss_pred EEEcCCceeECCCccchhHeeeeccccCchhhhccHHHHHHHHhcc
Confidence 4888887743 4444444333445556666777766543
No 35
>PF06378 DUF1071: Protein of unknown function (DUF1071); InterPro: IPR009425 This entry is represented by Bacteriophage bIL285, Orf14. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical bacterial and phage proteins of unknown function.
Probab=41.42 E-value=2.1e+02 Score=23.96 Aligned_cols=46 Identities=13% Similarity=0.325 Sum_probs=34.3
Q ss_pred ceeEeCCCCeEEEEeeecCCC---CCCHHHHHHHHHHHHHHHHHhcCCc
Q 027520 82 DITFHGPHQAILYPIISLRDI---GLGARNYVEKLESTMIEIASLYGVK 127 (222)
Q Consensus 82 ~iTyHgPGQLv~YpIl~l~~~---~~~~~~yv~~Le~~~i~~l~~~gi~ 127 (222)
.+|..|--.--.+||+|-++. ..+..+-=+.+.++++..|+.+|+-
T Consensus 74 ~vti~g~t~~~~lPVMD~rNk~i~~p~~~dINka~~RclVKalA~~GLG 122 (164)
T PF06378_consen 74 SVTIEGQTYTMWLPVMDGRNKAIEKPTAFDINKAIMRCLVKALAMFGLG 122 (164)
T ss_pred EEEECCEEEEEEEeecCCCCCcccCcchhhhHHHHHHHHHHHHHHhCcc
Confidence 356666666779999998875 3566666778888888888887763
No 36
>PRK05761 DNA polymerase I; Reviewed
Probab=28.15 E-value=1.3e+02 Score=31.10 Aligned_cols=42 Identities=26% Similarity=0.351 Sum_probs=34.5
Q ss_pred CCCCeEEEEeeecC----------CCCCCHHHHHHHHHHHHHHHHHhcCCcC
Q 027520 87 GPHQAILYPIISLR----------DIGLGARNYVEKLESTMIEIASLYGVKA 128 (222)
Q Consensus 87 gPGQLv~YpIl~l~----------~~~~~~~~yv~~Le~~~i~~l~~~gi~a 128 (222)
+||+-|.|.|++-+ ....|...|++.|..++-++|.-+|++-
T Consensus 721 ~~Gd~I~YVi~~~~~~~~p~~~~~~~~iD~~yYi~~l~~~~~~il~~~g~~~ 772 (787)
T PRK05761 721 SPGDIISYVKVDDKRGVKPVQLAKLSEIDVEKYIELLRSALEQILSALGVSW 772 (787)
T ss_pred CCCCEEEEEEEcCCCCCChhhhcccCCcCHHHHHHHHHHHHHHHHHHhCCCH
Confidence 58888888888542 2257889999999999999999999975
No 37
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=23.68 E-value=36 Score=27.86 Aligned_cols=18 Identities=6% Similarity=-0.047 Sum_probs=14.5
Q ss_pred CCCCCEEEEEeCCCeeee
Q 027520 34 HKISDTLLSLQHPPTYTL 51 (222)
Q Consensus 34 ~~~~~~lll~eH~PvyT~ 51 (222)
.++||.+||+||.|.|-.
T Consensus 69 ydSpNFlWFrErYe~F~Y 86 (167)
T COG3818 69 YDSPNFLWFRERYENFFY 86 (167)
T ss_pred CCCCceeehhhhCCceEE
Confidence 357899999999996643
No 38
>PRK00407 hypothetical protein; Provisional
Probab=23.19 E-value=63 Score=25.91 Aligned_cols=17 Identities=12% Similarity=0.264 Sum_probs=14.9
Q ss_pred eeEeC------CCCeEEEEeeec
Q 027520 83 ITFHG------PHQAILYPIISL 99 (222)
Q Consensus 83 iTyHg------PGQLv~YpIl~l 99 (222)
+|||+ +|+..++.|+|+
T Consensus 117 vTyh~l~i~~~~~~~~~~vi~Di 139 (139)
T PRK00407 117 MTYHDMEIEKEDGCWMAQFVVDI 139 (139)
T ss_pred eecccEEEEEcCCeEEEEEEEeC
Confidence 68887 999999999985
No 39
>COG3760 Uncharacterized conserved protein [Function unknown]
Probab=21.49 E-value=38 Score=28.06 Aligned_cols=15 Identities=27% Similarity=0.800 Sum_probs=11.9
Q ss_pred EEEeCCCeeeecCCC
Q 027520 41 LSLQHPPTYTLGKRR 55 (222)
Q Consensus 41 ll~eH~PvyT~Gr~~ 55 (222)
-.+||||+||+--++
T Consensus 20 ~tveHppv~tveEs~ 34 (164)
T COG3760 20 TTVEHPPVFTVEESQ 34 (164)
T ss_pred ccccCCCceehHHHH
Confidence 368999999996554
No 40
>PRK04217 hypothetical protein; Provisional
Probab=20.91 E-value=41 Score=26.16 Aligned_cols=28 Identities=25% Similarity=0.344 Sum_probs=17.7
Q ss_pred cccCCCccccc-cccCCCCCCCcceeehhh
Q 027520 163 FNIDPDLNYFK-HIVPCGIADKDVTSLRRE 191 (222)
Q Consensus 163 LNv~~dL~~f~-~I~pCGl~~~~vTSl~~~ 191 (222)
+|.+++..+|. .|.||| ++..+..|.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~-~~~p~~~Lt~e 46 (110)
T PRK04217 18 IGFIPQVRHFYPAIPPVG-PPKPPIFMTYE 46 (110)
T ss_pred eeccCCcceEeCCCCCcc-CCCCcccCCHH
Confidence 45667777775 667797 45556555543
No 41
>COG2961 ComJ Protein involved in catabolism of external DNA [General function prediction only]
Probab=20.77 E-value=45 Score=30.05 Aligned_cols=34 Identities=35% Similarity=0.505 Sum_probs=24.3
Q ss_pred eEEEEeeecCCCCCCHHHHHHHHHHHHHH-HH-HhcCCcC
Q 027520 91 AILYPIISLRDIGLGARNYVEKLESTMIE-IA-SLYGVKA 128 (222)
Q Consensus 91 Lv~YpIl~l~~~~~~~~~yv~~Le~~~i~-~l-~~~gi~a 128 (222)
.++|||.+.+. +++|.+.||...|+ +| .++.+..
T Consensus 192 aiWYPik~r~~----~~~f~~~L~~~~i~kiL~iEL~VrP 227 (279)
T COG2961 192 AIWYPIKDRRQ----IRRFLRALEALGIRKILQIELAVRP 227 (279)
T ss_pred EEEEeecchHH----HHHHHHHHhhcCccceeeeEEEecC
Confidence 68999987754 58899999887773 33 4566543
No 42
>COG2333 ComEC Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=20.73 E-value=1.3e+02 Score=27.40 Aligned_cols=46 Identities=17% Similarity=0.119 Sum_probs=32.8
Q ss_pred CeeeecCCCCCCCCCC-cHHHHhhcCCeEEEeecCCceeEeCCCCeE
Q 027520 47 PTYTLGKRRTDHNLLI-SEAELKKLGAELHYTQRGGDITFHGPHQAI 92 (222)
Q Consensus 47 PvyT~Gr~~~~~~~l~-~~~~l~~~gi~v~~~~RGG~iTyHgPGQLv 92 (222)
++++.|+...-.+... -.+++++.++++++|++-|.|++=..|+-.
T Consensus 235 AliS~G~~N~yghPh~~Vl~rl~~~~~~v~rTd~~G~I~~~~~~~~~ 281 (293)
T COG2333 235 ALISSGRNNRYGHPHQEVLERLQKRGIKVYRTDQQGAITVTFSGDGW 281 (293)
T ss_pred EEEEeeccCCCCCCcHHHHHHHHhcCCeEEecCCCCeEEEEeCCCeE
Confidence 4667777543333210 026799999999999999999999887653
Done!