BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027521
(222 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SP35|TI172_ARATH Mitochondrial import inner membrane translocase subunit TIM17-2
OS=Arabidopsis thaliana GN=TIM17-2 PE=1 SV=2
Length = 243
Score = 307 bits (786), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 172/244 (70%), Positives = 189/244 (77%), Gaps = 23/244 (9%)
Query: 1 MGTPETSREPCPDRILDDVGGAFGMGAVGGAAFHFLKGTYNSPSGARLSGGTQAVRMNAP 60
MGTPETSREPCPDRILDD+GGAFGMGAVGG+AFHF+KGTYNSP G+R GGTQ+V MNAP
Sbjct: 1 MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAP 60
Query: 61 RVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGG 120
R GGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQG G+ASRSA+FGG
Sbjct: 61 RTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGG 120
Query: 121 VLLALIEGAGIMLNKVLSAPQNMPMMEE-------------------PAPNMAGVPGYPM 161
VLLALIEGAGIMLNKVL+ PQNM MME+ M G+ G M
Sbjct: 121 VLLALIEGAGIMLNKVLAQPQNM-MMEDPGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQM 179
Query: 162 GQMPGQVPVPVESSSPSSS---SSSSWFGGFFGGKKEDQATSGGSKTEVLESFDAPPVPS 218
GQM Q + ES + +++ SSSSWFGG F KKE+ SKTEVLESFDAPPVPS
Sbjct: 180 GQMQSQAQIRSESQNQNTASSSSSSSWFGGLFDKKKEEVQPGSESKTEVLESFDAPPVPS 239
Query: 219 FEYK 222
FE+K
Sbjct: 240 FEFK 243
>sp|Q9LN27|TI171_ARATH Mitochondrial import inner membrane translocase subunit TIM17-1
OS=Arabidopsis thaliana GN=TIM17-1 PE=2 SV=1
Length = 218
Score = 285 bits (730), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/222 (67%), Positives = 177/222 (79%), Gaps = 4/222 (1%)
Query: 1 MGTPETSREPCPDRILDDVGGAFGMGAVGGAAFHFLKGTYNSPSGARLSGGTQAVRMNAP 60
MGTPE+SREPCPDRILDDVGGAF MGAVGG+A+H ++G YNSP GARLSGG QA+RM+ P
Sbjct: 1 MGTPESSREPCPDRILDDVGGAFAMGAVGGSAYHLIRGIYNSPGGARLSGGVQALRMSGP 60
Query: 61 RVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGG 120
R GGSF+VWGGL+STFDC +VY RQKEDPWNSI++GAATGGFLS+RQGLG+++RSAL GG
Sbjct: 61 RSGGSFSVWGGLYSTFDCALVYARQKEDPWNSILSGAATGGFLSLRQGLGASARSALVGG 120
Query: 121 VLLALIEGAGIMLNKVLSAPQNMPMMEEPAPNMAGVPGYPMGQMPGQVPVPVESSSPSSS 180
VLLA+IEG GIMLNKV S N ME+ A +P Y MGQ+ GQ VPV +S SSS
Sbjct: 121 VLLAMIEGVGIMLNKVQSTAHNEQFMEDHAAT--SLP-YGMGQISGQ-SVPVPETSSSSS 176
Query: 181 SSSSWFGGFFGGKKEDQATSGGSKTEVLESFDAPPVPSFEYK 222
S SWFG F KKE + S+T +LESFDAPPVP++E+K
Sbjct: 177 GSVSWFGSLFKKKKETEDHHSESRTHILESFDAPPVPTYEFK 218
>sp|Q9VNA0|TI17A_DROME Probable mitochondrial import inner membrane translocase subunit
Tim17 1 OS=Drosophila melanogaster GN=Tim17b1 PE=2 SV=2
Length = 179
Score = 161 bits (407), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/133 (60%), Positives = 97/133 (72%), Gaps = 2/133 (1%)
Query: 5 ETSREPCPDRILDDVGGAFGMGAVGGAAFHFLKGTYNSPSGA--RLSGGTQAVRMNAPRV 62
E REPCP RI++D GGAF MGA+GG AF +KG N+PSG RLSGG AVR + V
Sbjct: 3 EYGREPCPFRIVEDCGGAFAMGALGGGAFQAIKGFRNAPSGLGYRLSGGLAAVRARSGLV 62
Query: 63 GGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVL 122
GG+FAVWG FS DC++VY R+KEDPWN+II+GA TGG L+ R GL S SAL GG L
Sbjct: 63 GGNFAVWGATFSAIDCSLVYFRKKEDPWNAIISGATTGGILAARTGLTSMLSSALVGGAL 122
Query: 123 LALIEGAGIMLNK 135
LALIEG GI+++
Sbjct: 123 LALIEGVGIVVSH 135
>sp|O60830|TI17B_HUMAN Mitochondrial import inner membrane translocase subunit Tim17-B
OS=Homo sapiens GN=TIMM17B PE=1 SV=1
Length = 172
Score = 160 bits (404), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 90/167 (53%), Positives = 111/167 (66%), Gaps = 8/167 (4%)
Query: 5 ETSREPCPDRILDDVGGAFGMGAVGGAAFHFLKGTYNSPSGAR--LSGGTQAVRMNAPRV 62
E +REPCP RI+DD GGAF MG +GG F +KG N+P G R L G AVR+ AP++
Sbjct: 3 EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRLRGSANAVRIRAPQI 62
Query: 63 GGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVL 122
GGSFAVWGGLFST DC +V LR KEDPWNSI +GA TG L+ R G + SA+ GG+L
Sbjct: 63 GGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGGIL 122
Query: 123 LALIEGAGIMLNKVLSAP-QNM-PMMEEPA--PNMAGV--PGYPMGQ 163
LALIEG GI+L + + +N P +E+P+ P G PGYP Q
Sbjct: 123 LALIEGVGILLTRYTAQQFRNAPPFLEDPSQLPPKDGTPAPGYPSYQ 169
>sp|Q2HJE9|TI17B_BOVIN Mitochondrial import inner membrane translocase subunit Tim17-B
OS=Bos taurus GN=TIMM17B PE=2 SV=1
Length = 172
Score = 158 bits (399), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 110/167 (65%), Gaps = 8/167 (4%)
Query: 5 ETSREPCPDRILDDVGGAFGMGAVGGAAFHFLKGTYNSPSG--ARLSGGTQAVRMNAPRV 62
E +REPCP RI+DD GGAF MG +GG F +KG N+P G RL G AVR+ AP++
Sbjct: 3 EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGMRHRLRGSVNAVRIRAPQI 62
Query: 63 GGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVL 122
GGSFAVWGGLFST DC +V LR KEDPWNSI +GA TG L+ R + SA+ GG+L
Sbjct: 63 GGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSVPLAMVGSAMMGGIL 122
Query: 123 LALIEGAGIMLNKVLSAP-QNM-PMMEEPA--PNMAGV--PGYPMGQ 163
LALIEG GI+L + + +N P +E+P P+ G PGYP Q
Sbjct: 123 LALIEGVGILLTRYTAQQFRNAPPFLEDPGQLPSKEGTPGPGYPSYQ 169
>sp|Q9Z0V8|TI17A_MOUSE Mitochondrial import inner membrane translocase subunit Tim17-A
OS=Mus musculus GN=Timm17a PE=2 SV=1
Length = 171
Score = 157 bits (398), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/137 (59%), Positives = 96/137 (70%), Gaps = 2/137 (1%)
Query: 5 ETSREPCPDRILDDVGGAFGMGAVGGAAFHFLKGTYNSPSG--ARLSGGTQAVRMNAPRV 62
E +REPCP RI+DD GGAF MG +GG F KG NSP G RL G A++ AP++
Sbjct: 3 EYAREPCPWRIVDDCGGAFTMGTIGGGIFQAFKGFRNSPVGINHRLRGSLTAIKTRAPQL 62
Query: 63 GGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVL 122
GGSFAVWGGLFST DC+MV +R KEDPWNSI +GA TG L+ R G + SA GG+L
Sbjct: 63 GGSFAVWGGLFSTIDCSMVQIRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGIL 122
Query: 123 LALIEGAGIMLNKVLSA 139
LALIEGAGI+L + SA
Sbjct: 123 LALIEGAGILLTRFASA 139
>sp|Q9Z0V7|TI17B_MOUSE Mitochondrial import inner membrane translocase subunit Tim17-B
OS=Mus musculus GN=Timm17b PE=2 SV=1
Length = 172
Score = 157 bits (397), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 109/167 (65%), Gaps = 8/167 (4%)
Query: 5 ETSREPCPDRILDDVGGAFGMGAVGGAAFHFLKGTYNSPSGAR--LSGGTQAVRMNAPRV 62
E +REPCP RI+DD GGAF MG +GG F +KG N+P G R G AVR+ AP++
Sbjct: 3 EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRFRGSVNAVRIRAPQI 62
Query: 63 GGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVL 122
GGSFAVWGGLFST DC +V LR KEDPWNSI +GA TG L+ R G + SA+ GG+L
Sbjct: 63 GGSFAVWGGLFSTIDCGLVRLRGKEDPWNSISSGALTGAVLAARSGPLAMVGSAMMGGIL 122
Query: 123 LALIEGAGIMLNKVLSAP-QNM-PMMEEPA----PNMAGVPGYPMGQ 163
LALIEG GI+L + + +N P +E+P+ + PGYP Q
Sbjct: 123 LALIEGVGILLTRYTAQQFRNAPPFLEDPSQLTPKEGSPAPGYPNYQ 169
>sp|Q99595|TI17A_HUMAN Mitochondrial import inner membrane translocase subunit Tim17-A
OS=Homo sapiens GN=TIMM17A PE=1 SV=1
Length = 171
Score = 156 bits (395), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 101/150 (67%), Gaps = 4/150 (2%)
Query: 5 ETSREPCPDRILDDVGGAFGMGAVGGAAFHFLKGTYNSPSGA--RLSGGTQAVRMNAPRV 62
E +REPCP RI+DD GGAF MG +GG F +KG NSP G RL G A++ AP++
Sbjct: 3 EYAREPCPWRIVDDCGGAFTMGTIGGGIFQAIKGFRNSPVGVNHRLRGSLTAIKTRAPQL 62
Query: 63 GGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVL 122
GGSFAVWGGLFS DC+MV +R KEDPWNSI +GA TG L+ R G + SA GG+L
Sbjct: 63 GGSFAVWGGLFSMIDCSMVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGIL 122
Query: 123 LALIEGAGIMLNKVLSA--PQNMPMMEEPA 150
LALIEGAGI+L + SA P E+P+
Sbjct: 123 LALIEGAGILLTRFASAQFPNGPQFAEDPS 152
>sp|O35092|TI17A_RAT Mitochondrial import inner membrane translocase subunit Tim17-A
OS=Rattus norvegicus GN=Timm17a PE=2 SV=1
Length = 171
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/137 (59%), Positives = 95/137 (69%), Gaps = 2/137 (1%)
Query: 5 ETSREPCPDRILDDVGGAFGMGAVGGAAFHFLKGTYNSPSGA--RLSGGTQAVRMNAPRV 62
E +REPCP RI+DD GGAF MG +GG F KG NSP G RL G A++ AP++
Sbjct: 3 EYAREPCPWRIVDDCGGAFTMGTIGGGIFQAFKGFRNSPVGVNHRLRGSLTAIKTRAPQL 62
Query: 63 GGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVL 122
GGSFAVWGGLFST DC MV +R KEDPWNSI +GA TG L+ R G + SA GG+L
Sbjct: 63 GGSFAVWGGLFSTIDCGMVQIRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGIL 122
Query: 123 LALIEGAGIMLNKVLSA 139
LALIEGAGI+L + SA
Sbjct: 123 LALIEGAGILLTRFASA 139
>sp|Q9LYG1|TI173_ARATH Mitochondrial import inner membrane translocase subunit TIM17-3
OS=Arabidopsis thaliana GN=TIM17-3 PE=2 SV=1
Length = 133
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/127 (59%), Positives = 98/127 (77%)
Query: 1 MGTPETSREPCPDRILDDVGGAFGMGAVGGAAFHFLKGTYNSPSGARLSGGTQAVRMNAP 60
M T + S+E RI++ +G AFG GAVGG+ +HF++G YNSP GAR GGTQA MNAP
Sbjct: 1 MDTKKKSKEHGLYRIVNAIGYAFGAGAVGGSVYHFVRGAYNSPIGARYVGGTQAASMNAP 60
Query: 61 RVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGG 120
R+GG+FAV+GGL STFD +V +R+KEDPWNSI+AGAATGG LS+R+G+ +AS SA+ G
Sbjct: 61 RLGGTFAVFGGLLSTFDYALVRIRKKEDPWNSIVAGAATGGVLSIRKGVVAASTSAVMFG 120
Query: 121 VLLALIE 127
LA++
Sbjct: 121 FFLAVLN 127
>sp|Q9VGA2|TI17C_DROME Probable mitochondrial import inner membrane translocase subunit
Tim17 3 OS=Drosophila melanogaster GN=Tim17a1 PE=2 SV=1
Length = 222
Score = 153 bits (386), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 102/147 (69%), Gaps = 2/147 (1%)
Query: 5 ETSREPCPDRILDDVGGAFGMGAVGGAAFHFLKGTYNSPSG--ARLSGGTQAVRMNAPRV 62
E +R+PCP RI++D G AF MG +GG+ F FLKG N+P+G RL GG V+M P +
Sbjct: 2 EYNRQPCPIRIVEDCGCAFMMGTIGGSLFEFLKGFRNAPTGLQRRLYGGIDLVKMRTPSI 61
Query: 63 GGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVL 122
GSFAVWG FST DC +V+ RQ+ED WNSI++GAATGG L+ R G+ + + SAL G ++
Sbjct: 62 AGSFAVWGATFSTVDCALVHYRQREDAWNSILSGAATGGILAARNGIRAMANSALVGCLV 121
Query: 123 LALIEGAGIMLNKVLSAPQNMPMMEEP 149
LA+IEGAG + + +A + ++ +P
Sbjct: 122 LAMIEGAGAAVATINAADKGAGIVIKP 148
>sp|Q9VN97|TI17D_DROME Probable mitochondrial import inner membrane translocase subunit
Tim17 4 OS=Drosophila melanogaster GN=Tim17a2 PE=3 SV=1
Length = 224
Score = 149 bits (377), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 93/128 (72%), Gaps = 2/128 (1%)
Query: 5 ETSREPCPDRILDDVGGAFGMGAVGGAAFHFLKGTYNSPSGAR--LSGGTQAVRMNAPRV 62
E +R+PCP RI++D G AF MG +GG+ F +LKG N+PSG R L GG ++VR+ P +
Sbjct: 2 EYNRQPCPIRIVEDCGCAFMMGTMGGSLFQYLKGFRNAPSGLRRGLHGGIESVRLRTPAI 61
Query: 63 GGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVL 122
GSFA+WG FST DC MV RQ+ED WN+I++GAATGG L+ R G+ + + SA G ++
Sbjct: 62 AGSFAIWGATFSTVDCVMVSYRQREDSWNAIVSGAATGGILAARNGIRAMANSAFVGCLV 121
Query: 123 LALIEGAG 130
LA++EGAG
Sbjct: 122 LAMLEGAG 129
>sp|P59670|TIM17_NEUCR Mitochondrial import inner membrane translocase subunit tim-17
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=tim-17 PE=2 SV=1
Length = 155
Score = 147 bits (372), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 99/148 (66%), Gaps = 4/148 (2%)
Query: 5 ETSREPCPDRILDDVGGAFGMGAVGGAAFHFLKGTYNSPSGARLSGGTQAVRMNAPRVGG 64
+ +R+PCP IL+D GGAF MGA+GG +H +KG NSP G R G A++M AP +GG
Sbjct: 2 DHTRDPCPWVILNDFGGAFAMGAIGGTIWHGIKGFRNSPYGERRIGAITAIKMRAPALGG 61
Query: 65 SFAVWGGLFSTFDCTMVYLR-QKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLL 123
+F VWGGLFSTFDC + LR KEDPWNSI+AG TGG L++R G +A A+ VLL
Sbjct: 62 NFGVWGGLFSTFDCAIKGLRNHKEDPWNSILAGFFTGGALAVRGGYKAARNGAIGCAVLL 121
Query: 124 ALIEGAGIMLNKVLSAPQNMPMMEEPAP 151
A+IEG GI K+L+ +E PAP
Sbjct: 122 AVIEGVGIGFQKMLAGATK---LEAPAP 146
>sp|P39515|TIM17_YEAST Mitochondrial import inner membrane translocase subunit TIM17
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TIM17 PE=1 SV=1
Length = 158
Score = 143 bits (361), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 96/143 (67%), Gaps = 1/143 (0%)
Query: 3 TPETSREPCPDRILDDVGGAFGMGAVGGAAFHFLKGTYNSPSGARLSGGTQAVRMNAPRV 62
+ + SR+PCP IL+D GGAF MGA+GG +H +KG NSP G R SG A++ AP +
Sbjct: 2 SADHSRDPCPIVILNDFGGAFAMGAIGGVVWHGIKGFRNSPLGERGSGAMSAIKARAPVL 61
Query: 63 GGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVL 122
GG+F VWGGLFSTFDC + +R++EDPWN+IIAG TGG L++R G S++ L
Sbjct: 62 GGNFGVWGGLFSTFDCAVKAVRKREDPWNAIIAGFFTGGALAVRGGWRHTRNSSITCACL 121
Query: 123 LALIEGAGIMLNKVLSAPQNMPM 145
L +IEG G+M + +A Q PM
Sbjct: 122 LGVIEGVGLMFQR-YAAWQAKPM 143
>sp|P87130|TIM17_SCHPO Mitochondrial import inner membrane translocase subunit tim17
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tim17 PE=3 SV=1
Length = 164
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 94/145 (64%), Gaps = 1/145 (0%)
Query: 1 MGTPETSREPCPDRILDDVGGAFGMGAVGGAAFHFLKGTYNSPSGARLSGGTQAVRMNAP 60
M + + +R+PCP IL+D G AF MG +GGA +H +KG NSP G + A + AP
Sbjct: 1 MASADHTRDPCPYVILNDFGAAFSMGTIGGAIWHSIKGWRNSPPGEKRISAIAAAKTRAP 60
Query: 61 RVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGG 120
+GG+F VWGGLFSTFDC + +R+KEDPWN+IIAG TGG L++R G + A+
Sbjct: 61 VLGGNFGVWGGLFSTFDCAVKGVRRKEDPWNAIIAGFFTGGALAVRGGWRATRNGAIGCA 120
Query: 121 VLLALIEGAGIMLNKVLSAPQNMPM 145
+LA+ EG GI L + ++A N P+
Sbjct: 121 CILAVFEGLGIALGR-MNAEYNRPV 144
>sp|O44477|TIM17_CAEEL Probable mitochondrial import inner membrane translocase subunit
Tim17 OS=Caenorhabditis elegans GN=tim-17 PE=3 SV=1
Length = 181
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 87/135 (64%)
Query: 5 ETSREPCPDRILDDVGGAFGMGAVGGAAFHFLKGTYNSPSGARLSGGTQAVRMNAPRVGG 64
E +REPCP RI DD+G AF MG VGG+ F G N+ G +L G + VRM + G
Sbjct: 3 EYTREPCPYRIGDDIGSAFAMGLVGGSIFQAFGGYKNAAKGKKLVGMMREVRMRSTLTGV 62
Query: 65 SFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLA 124
FA WGG+FST DC +V +R+KEDP NSI++G TG L++R G + SA+ G V+LA
Sbjct: 63 QFAAWGGMFSTIDCCLVAIRKKEDPINSIVSGGLTGALLAIRSGPKVMAGSAILGSVILA 122
Query: 125 LIEGAGIMLNKVLSA 139
+IEG G++ + + A
Sbjct: 123 MIEGVGLVTTRWMGA 137
>sp|Q54K35|TIM17_DICDI Mitochondrial import inner membrane translocase subunit tim17
OS=Dictyostelium discoideum GN=timm17 PE=3 SV=1
Length = 183
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 77/132 (58%)
Query: 10 PCPDRILDDVGGAFGMGAVGGAAFHFLKGTYNSPSGARLSGGTQAVRMNAPRVGGSFAVW 69
PCPD+I D GGAF +G V + G SP R+ +R +P+ GG+FA+W
Sbjct: 4 PCPDKIWQDAGGAFAIGYVLMGVVNIGLGFKRSPPNKRVLYTFALLRKKSPKFGGNFAIW 63
Query: 70 GGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGA 129
G LFS FDCT+ Y+R+ ED N I AGA TGG L+ R G + ++A FGG+ + +IE
Sbjct: 64 GSLFSGFDCTLSYIRKTEDTVNPIAAGALTGGILAARSGWKHSVQAAAFGGIFIGIIEAF 123
Query: 130 GIMLNKVLSAPQ 141
M+ K + A Q
Sbjct: 124 QHMMQKRMQAQQ 135
>sp|Q6BZY4|TIM22_YARLI Mitochondrial import inner membrane translocase subunit TIM22
OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=TIM22 PE=3 SV=2
Length = 185
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 65 SFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQG 108
+F GG+FS +C + LR K D WN + AG TGG L+++ G
Sbjct: 106 NFGFIGGVFSGTECCIESLRAKNDIWNGVAAGCLTGGGLAVKAG 149
>sp|Q5M7K0|TIM22_XENTR Mitochondrial import inner membrane translocase subunit Tim22
OS=Xenopus tropicalis GN=timm22 PE=2 SV=1
Length = 186
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 65 SFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGL 109
+FA+ G +FS +C + R K D NS+I+G TGG + R GL
Sbjct: 120 NFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGFRAGL 164
>sp|Q5BIN4|TIM22_BOVIN Mitochondrial import inner membrane translocase subunit Tim22
OS=Bos taurus GN=TIMM22 PE=2 SV=1
Length = 194
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 65 SFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGL 109
+FA+ G +FS +C + R K D NS+I+G TGG + R GL
Sbjct: 128 NFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGFRAGL 172
>sp|Q9CQ85|TIM22_MOUSE Mitochondrial import inner membrane translocase subunit Tim22
OS=Mus musculus GN=Timm22 PE=2 SV=1
Length = 194
Score = 39.7 bits (91), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 65 SFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGL 109
+FA+ G +FS +C + R K D NS+I+G TGG + R G+
Sbjct: 128 NFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGFRAGV 172
>sp|A2RVP7|TI221_ARATH Mitochondrial import inner membrane translocase subunit TIM22-1
OS=Arabidopsis thaliana GN=TIM22-1 PE=2 SV=1
Length = 173
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 65 SFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQG 108
+FAV G +FS +C + R K D N+ IAG TGG +S R G
Sbjct: 104 TFAVMGLVFSAAECIVEKARAKHDTVNTAIAGCVTGGSMSARGG 147
>sp|Q9JKW1|TIM22_RAT Mitochondrial import inner membrane translocase subunit Tim22
OS=Rattus norvegicus GN=Timm22 PE=2 SV=2
Length = 192
Score = 38.9 bits (89), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 65 SFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGL 109
+FA+ G +FS +C + R K D NS+I+G TGG + R G+
Sbjct: 126 NFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGFRAGV 170
>sp|Q9Y584|TIM22_HUMAN Mitochondrial import inner membrane translocase subunit Tim22
OS=Homo sapiens GN=TIMM22 PE=1 SV=2
Length = 194
Score = 38.9 bits (89), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 65 SFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGL 109
+FA+ G +FS +C + R D NS+I+G TGG + R GL
Sbjct: 128 NFAIVGAMFSCTECLIESYRGTSDWKNSVISGCITGGAIGFRAGL 172
>sp|Q5U4U5|TIM22_XENLA Mitochondrial import inner membrane translocase subunit Tim22
OS=Xenopus laevis GN=timm22 PE=2 SV=1
Length = 184
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 65 SFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGL 109
+FA+ G +FS +C + R K D NS+++G TGG + R GL
Sbjct: 118 NFAIVGAMFSCTECLVESYRGKSDWKNSVMSGCITGGAIGFRAGL 162
>sp|A1XJK0|TI224_ARATH Mitochondrial import inner membrane translocase subunit TIM22-4
OS=Arabidopsis thaliana GN=TIM22-4 PE=2 SV=3
Length = 142
Score = 38.5 bits (88), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%)
Query: 65 SFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLA 124
+FAV G +FS +C + R K D N+ IAG TGG +S R G +A +
Sbjct: 73 TFAVMGLVFSAAECIVEKARAKHDTVNTAIAGCVTGGSMSARGGPKAACIGCAGFAIFSV 132
Query: 125 LIE 127
LIE
Sbjct: 133 LIE 135
>sp|Q75E80|TIM22_ASHGO Mitochondrial import inner membrane translocase subunit TIM22
OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=TIM22 PE=3 SV=1
Length = 201
Score = 37.4 bits (85), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 65 SFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQG 108
+F G ++S +CT+ LR K D +N + AG TGG L+ + G
Sbjct: 122 NFGYIGMIYSGVECTIESLRAKNDLYNGVAAGCLTGGGLAYKSG 165
>sp|P87146|TIM22_SCHPO Mitochondrial import inner membrane translocase subunit tim22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tim22 PE=3 SV=1
Length = 175
Score = 37.4 bits (85), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 53 QAVRMNAPRVGG-------SFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSM 105
+ +R+ A +G +F + G ++S +C + R K D +N+I AG TGG L++
Sbjct: 87 EQIRIQARDMGSRSFSTAKNFGLLGLIYSGSECCIEAFRAKTDIYNAIAAGVFTGGALAV 146
Query: 106 RQG 108
R G
Sbjct: 147 RSG 149
>sp|Q6BT35|TIM22_DEBHA Mitochondrial import inner membrane translocase subunit TIM22
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=TIM22 PE=3 SV=1
Length = 182
Score = 37.4 bits (85), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 65 SFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQG 108
+F G ++S +C + LR K D +N + AG TGG L++R G
Sbjct: 103 NFGYIGMVYSGVECAIESLRAKHDIYNGVSAGCITGGGLAIRAG 146
>sp|Q2UAP8|TIM22_ASPOR Mitochondrial import inner membrane translocase subunit tim22
OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=tim22 PE=3 SV=1
Length = 184
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 65 SFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFL 103
+F + G L+S +C + LR K D NS+I+G TGG L
Sbjct: 113 NFGIVGALYSGTECCVEGLRAKNDLSNSVISGCITGGIL 151
>sp|Q6FT37|TIM22_CANGA Mitochondrial import inner membrane translocase subunit TIM22
OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=TIM22 PE=3 SV=1
Length = 193
Score = 35.8 bits (81), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 65 SFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQG 108
+F G +++ +C + LR K D +N I AG TGG L+ + G
Sbjct: 114 NFGYIGMIYAGVECAVESLRAKNDIYNGITAGCITGGGLAYKSG 157
>sp|Q6CRJ6|TIM22_KLULA Mitochondrial import inner membrane translocase subunit TIM22
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TIM22
PE=3 SV=1
Length = 196
Score = 35.8 bits (81), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 65 SFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQG 108
+F G ++S +C + LR K D +N + AG TGG L+ + G
Sbjct: 117 NFGYIGMIYSGVECVVESLRAKNDIYNGVAAGCLTGGGLAYKSG 160
>sp|Q9USM7|TIM23_SCHPO Mitochondrial import inner membrane translocase subunit tim23
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tim23 PE=3 SV=1
Length = 210
Score = 35.4 bits (80), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 30/63 (47%)
Query: 47 RLSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMR 106
RL+G V P VG S V +++ + + Y RQK NS+ AGA TG
Sbjct: 119 RLNGILNGVTRRGPFVGNSLGVLALVYNGINSLIGYKRQKHGWENSVAAGALTGALYKST 178
Query: 107 QGL 109
+GL
Sbjct: 179 RGL 181
>sp|Q9C1E8|TIM22_NEUCR Mitochondrial import inner membrane translocase subunit tim-22
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=tim-22 PE=3 SV=2
Length = 194
Score = 34.3 bits (77), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%)
Query: 43 PSGARLSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGF 102
P +L G + + + +FA G LFS +C + LR K D N + AG TG
Sbjct: 100 PLKEQLKHGFKDMGQRSYSTAKNFAKVGALFSGIECGIEGLRAKNDLGNGVAAGCLTGAI 159
Query: 103 LSMRQG 108
L+ G
Sbjct: 160 LAKNGG 165
>sp|Q6NKU9|TI223_ARATH Mitochondrial import inner membrane translocase subunit TIM22-3
OS=Arabidopsis thaliana GN=TIM22-3 PE=2 SV=1
Length = 214
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 57 MNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSA 116
++A + +FAV G+ S C + +R K+D N +AG TG LS + +S
Sbjct: 82 VDAGQSAKTFAVLSGVHSLVVCLLKQIRGKDDAINVGVAGCCTGLALSFPGAPQAMLQSC 141
Query: 117 LFGGVLLALIEGAGIMLNKVLSA 139
L G ++EG LNK +A
Sbjct: 142 LTFGAFSFILEG----LNKRQTA 160
>sp|P21576|VPS1_YEAST Vacuolar protein sorting-associated protein 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPS1 PE=1
SV=2
Length = 704
Score = 32.7 bits (73), Expect = 2.0, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 136 VLSAPQNMPMMEEPA-PNMAGVPGYPMGQMPGQVPVPVESSSPSSSSSSSWFGGFFGGKK 194
+L Q M M+EE P V +P Q P S +P S +FGGFF K
Sbjct: 534 LLKGSQAMVMVEEKLHPRQVAVDPKTGKPLPTQ---PSSSKAPVMEEKSGFFGGFFSTKN 590
Query: 195 EDQATSGGSKTEVLES 210
+ + + S VL++
Sbjct: 591 KKKLAALESPPPVLKA 606
>sp|A1WVN6|NTPA_HALHL Non-canonical purine NTP pyrophosphatase OS=Halorhodospira
halophila (strain DSM 244 / SL1) GN=Hhal_0972 PE=3 SV=1
Length = 199
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 75 TFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQG 108
TF C MVYLR DP I G+ TG + +G
Sbjct: 116 TFHCVMVYLRHAADPAPVIAHGSWTGRIVETPRG 149
>sp|Q94EH2|TI222_ARATH Mitochondrial import inner membrane translocase subunit TIM22-2
OS=Arabidopsis thaliana GN=TIM22-2 PE=2 SV=1
Length = 210
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 52/125 (41%), Gaps = 15/125 (12%)
Query: 11 CPDRILDDVGGAFGMGAVGGAAFHFLKGTYNSPSGARLSGGTQAVRMNAPRVGGSFAVWG 70
C R D G GAV G+ F + G + G + +A + +FAV
Sbjct: 47 CLFRFAGDAAG----GAVMGSIFGYGSGLFKKK-------GFKGSFADAGQSAKTFAVLS 95
Query: 71 GLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAG 130
G+ S C + +R K+D N +AG TG LS + +S L G ++EG
Sbjct: 96 GVHSLVVCLLKQIRGKDDAINVGVAGCCTGLALSFPGAPQALLQSCLTFGAFSFILEG-- 153
Query: 131 IMLNK 135
LNK
Sbjct: 154 --LNK 156
>sp|P32897|TIM23_YEAST Mitochondrial import inner membrane translocase subunit TIM23
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TIM23 PE=1 SV=1
Length = 222
Score = 32.0 bits (71), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 41 NSPSGARLSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATG 100
NSP +L+ + P +G + + ++ + T+ LR K D SI AGA TG
Sbjct: 127 NSPGKLQLNTVLNHITKRGPFLGNNAGILALSYNIINSTIDALRGKHDTAGSIGAGALTG 186
Query: 101 GFLSMRQGL 109
+GL
Sbjct: 187 ALFKSSKGL 195
>sp|Q9NPL8|TIDC1_HUMAN Translocase of inner mitochondrial membrane domain-containing
protein 1 OS=Homo sapiens GN=TIMMDC1 PE=1 SV=2
Length = 285
Score = 32.0 bits (71), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 61 RVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGG 120
R G AV+ +F+T + ++ R K+ + +IAGA TG + GL R + GG
Sbjct: 137 RWGWRTAVFVTIFNTVNTSLNVYRNKDALSHFVIAGAVTGSLFRINVGL----RGLVAGG 192
Query: 121 VLLALI 126
++ AL+
Sbjct: 193 IIGALL 198
>sp|Q12328|TIM22_YEAST Mitochondrial import inner membrane translocase subunit TIM22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TIM22 PE=1 SV=1
Length = 207
Score = 31.6 bits (70), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 65 SFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQG 108
+F G +++ +C + LR K D +N + AG TG L+ + G
Sbjct: 128 NFGYIGMIYAGVECVIESLRAKNDIYNGVTAGFFTGAGLAYKAG 171
>sp|A1CME3|SEC16_ASPCL COPII coat assembly protein sec16 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=sec16 PE=3 SV=1
Length = 1875
Score = 31.2 bits (69), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 177 PSSSSSSSWFGGFFGGKKEDQATSGG 202
P +++ WF G+FGGKKE+ + GG
Sbjct: 1687 PPTTAKKGWFTGWFGGKKEENNSGGG 1712
>sp|A2SQS1|CYAS_METLZ Cysteate synthase OS=Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z) GN=Mlab_0503 PE=3 SV=1
Length = 412
Score = 30.4 bits (67), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 24/59 (40%)
Query: 154 AGVPGYPMGQMPGQVPVPVESSSPSSSSSSSWFGGFFGGKKEDQATSGGSKTEVLESFD 212
AG G QM + PV P SS+ W G+F T G T+ +++ D
Sbjct: 129 AGNTGRAFAQMSAEFGTPVVLVVPESSADKLWTAGYFDHSSIRLVTVRGDYTDAIKTAD 187
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.134 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,087,036
Number of Sequences: 539616
Number of extensions: 4188075
Number of successful extensions: 12038
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 11887
Number of HSP's gapped (non-prelim): 188
length of query: 222
length of database: 191,569,459
effective HSP length: 113
effective length of query: 109
effective length of database: 130,592,851
effective search space: 14234620759
effective search space used: 14234620759
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)