Query 027522
Match_columns 222
No_of_seqs 175 out of 613
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 18:54:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027522.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027522hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ece_A 462AA long hypothetical 100.0 8.7E-62 3E-66 459.8 20.4 195 1-222 254-460 (462)
2 3scy_A Hypothetical bacterial 99.8 3.4E-18 1.1E-22 146.7 20.1 128 4-188 215-344 (361)
3 3hfq_A Uncharacterized protein 99.8 3.4E-18 1.2E-22 145.5 19.0 132 4-187 191-323 (347)
4 1jof_A Carboxy-CIS,CIS-muconat 99.7 4.5E-16 1.5E-20 135.6 17.8 116 5-153 198-328 (365)
5 1ri6_A Putative isomerase YBHE 99.7 5.7E-15 2E-19 122.5 19.8 135 5-192 183-319 (343)
6 3hfq_A Uncharacterized protein 99.6 5E-13 1.7E-17 113.5 22.1 135 5-188 91-225 (347)
7 3scy_A Hypothetical bacterial 99.6 2.5E-13 8.6E-18 116.3 19.9 133 5-192 160-302 (361)
8 3u4y_A Uncharacterized protein 99.5 1.5E-12 5E-17 109.1 19.0 127 4-190 132-259 (331)
9 1jof_A Carboxy-CIS,CIS-muconat 99.5 4.7E-12 1.6E-16 110.1 19.6 120 5-153 150-273 (365)
10 2mad_H Methylamine dehydrogena 99.5 1.2E-12 4E-17 117.8 15.1 104 6-153 27-143 (373)
11 3sjl_D Methylamine dehydrogena 99.4 1.5E-12 5.1E-17 120.3 14.5 104 6-153 39-155 (386)
12 1nir_A Nitrite reductase; hemo 99.4 4.1E-12 1.4E-16 119.3 17.3 129 5-187 227-359 (543)
13 2oiz_A Aromatic amine dehydrog 99.4 1.6E-12 5.3E-17 115.0 11.8 115 5-153 55-180 (361)
14 1ri6_A Putative isomerase YBHE 99.4 2.7E-11 9.4E-16 100.3 16.2 124 5-187 89-215 (343)
15 3c75_H MADH, methylamine dehyd 99.3 1E-11 3.6E-16 115.6 14.1 119 8-186 81-212 (426)
16 2oiz_A Aromatic amine dehydrog 99.3 9.6E-12 3.3E-16 109.9 12.9 100 9-153 13-126 (361)
17 3vgz_A Uncharacterized protein 99.3 6.1E-11 2.1E-15 99.2 16.8 98 5-154 236-333 (353)
18 3u4y_A Uncharacterized protein 99.3 2.8E-11 9.4E-16 101.3 14.4 123 4-180 180-303 (331)
19 2mad_H Methylamine dehydrogena 99.3 3.7E-11 1.3E-15 108.0 15.1 86 5-103 71-168 (373)
20 1qks_A Cytochrome CD1 nitrite 99.3 5.9E-11 2E-15 113.3 14.9 133 7-187 396-542 (567)
21 3vgz_A Uncharacterized protein 99.3 2.1E-10 7.2E-15 95.9 16.5 117 5-186 190-306 (353)
22 1mda_H Methylamine dehydrogena 99.3 2.9E-11 1E-15 110.2 12.2 101 10-154 30-143 (368)
23 1nir_A Nitrite reductase; hemo 99.2 9.8E-11 3.3E-15 109.9 14.8 98 5-153 143-244 (543)
24 3sjl_D Methylamine dehydrogena 99.2 6.6E-11 2.3E-15 109.3 12.3 114 4-153 82-206 (386)
25 2ece_A 462AA long hypothetical 99.2 3.1E-10 1E-14 107.7 16.7 146 5-194 193-364 (462)
26 1fwx_A Nitrous oxide reductase 99.2 6.3E-11 2.1E-15 115.4 10.8 145 5-194 282-442 (595)
27 1qks_A Cytochrome CD1 nitrite 99.2 5E-10 1.7E-14 106.9 16.4 130 4-187 244-377 (567)
28 3g4e_A Regucalcin; six bladed 99.1 2.9E-09 9.8E-14 90.4 16.9 106 5-154 154-261 (297)
29 3c75_H MADH, methylamine dehyd 99.1 6E-10 2E-14 103.8 11.4 87 5-103 123-220 (426)
30 1fwx_A Nitrous oxide reductase 99.1 1.5E-10 5.1E-15 112.7 7.6 102 4-147 335-456 (595)
31 3tc9_A Hypothetical hydrolase; 99.0 3.3E-09 1.1E-13 97.1 13.5 146 5-213 184-335 (430)
32 3dsm_A Uncharacterized protein 99.0 5E-09 1.7E-13 90.7 14.0 95 10-154 139-244 (328)
33 1l0q_A Surface layer protein; 99.0 2.4E-08 8.2E-13 85.2 18.0 99 4-153 78-176 (391)
34 3g4e_A Regucalcin; six bladed 99.0 1.4E-08 4.8E-13 86.1 16.1 128 5-197 59-195 (297)
35 1l0q_A Surface layer protein; 99.0 2.1E-08 7.3E-13 85.6 17.3 99 4-153 36-134 (391)
36 1pby_B Quinohemoprotein amine 99.0 5.4E-09 1.9E-13 86.2 12.3 114 4-162 38-162 (337)
37 1npe_A Nidogen, entactin; glyc 99.0 1.2E-08 4E-13 84.9 14.1 101 4-153 83-185 (267)
38 2iwa_A Glutamine cyclotransfer 99.0 1.6E-08 5.4E-13 89.1 15.5 136 4-214 25-162 (266)
39 3bws_A Protein LP49; two-domai 98.9 4.4E-08 1.5E-12 84.8 17.2 99 4-153 307-419 (433)
40 3dsm_A Uncharacterized protein 98.9 2E-08 7E-13 86.9 14.4 100 5-153 89-189 (328)
41 2iwa_A Glutamine cyclotransfer 98.9 1.6E-08 5.4E-13 89.0 13.6 113 8-186 72-184 (266)
42 2p4o_A Hypothetical protein; p 98.9 1.2E-08 4E-13 87.4 12.4 119 8-179 175-298 (306)
43 1mda_H Methylamine dehydrogena 98.9 1.1E-09 3.9E-14 99.7 5.4 85 5-103 70-166 (368)
44 1pby_B Quinohemoprotein amine 98.9 3.3E-08 1.1E-12 81.5 13.4 96 6-153 180-298 (337)
45 1npe_A Nidogen, entactin; glyc 98.9 9.1E-08 3.1E-12 79.5 15.7 113 5-186 127-241 (267)
46 1pjx_A Dfpase, DIISOPROPYLFLUO 98.8 8.9E-08 3E-12 79.3 14.9 118 5-180 177-298 (314)
47 1jmx_B Amine dehydrogenase; ox 98.8 5E-08 1.7E-12 81.0 12.8 76 4-89 47-134 (349)
48 1jmx_B Amine dehydrogenase; ox 98.8 1.7E-07 5.9E-12 77.8 15.1 106 5-153 5-110 (349)
49 3kya_A Putative phosphatase; s 98.8 7.7E-08 2.6E-12 91.6 14.0 148 8-213 201-375 (496)
50 3e5z_A Putative gluconolactona 98.8 6.2E-07 2.1E-11 74.8 17.3 112 5-187 177-290 (296)
51 3bws_A Protein LP49; two-domai 98.7 3.2E-07 1.1E-11 79.3 15.4 99 4-153 216-321 (433)
52 2dg1_A DRP35, lactonase; beta 98.7 2E-06 6.9E-11 72.2 18.0 127 5-180 187-315 (333)
53 3dr2_A Exported gluconolactona 98.7 8.6E-07 3E-11 75.1 15.6 98 5-153 193-295 (305)
54 3fvz_A Peptidyl-glycine alpha- 98.7 5.7E-07 1.9E-11 77.2 14.5 134 5-186 96-230 (329)
55 4hw6_A Hypothetical protein, I 98.6 5.9E-07 2E-11 82.4 14.3 120 5-187 187-310 (433)
56 3fvz_A Peptidyl-glycine alpha- 98.6 2.4E-06 8.1E-11 73.3 16.9 86 5-99 148-234 (329)
57 2qe8_A Uncharacterized protein 98.6 1.7E-06 5.8E-11 75.0 16.1 123 4-153 71-213 (343)
58 3hrp_A Uncharacterized protein 98.6 1.1E-06 3.8E-11 79.4 14.8 135 4-179 271-408 (409)
59 2ghs_A AGR_C_1268P; regucalcin 98.6 1.3E-06 4.3E-11 75.5 14.5 105 5-154 184-291 (326)
60 2xyi_A Probable histone-bindin 98.6 5.5E-07 1.9E-11 79.8 12.0 72 4-89 282-353 (430)
61 3nok_A Glutaminyl cyclase; bet 98.6 1.2E-06 4.2E-11 77.8 14.1 112 8-186 102-213 (268)
62 3nol_A Glutamine cyclotransfer 98.6 8.9E-07 3E-11 78.3 13.2 113 8-187 93-205 (262)
63 3tc9_A Hypothetical hydrolase; 98.6 1.2E-06 4.2E-11 80.0 14.5 139 5-180 275-429 (430)
64 1ijq_A LDL receptor, low-densi 98.5 2.2E-06 7.5E-11 74.4 14.9 101 5-154 82-183 (316)
65 3hrp_A Uncharacterized protein 98.5 9.7E-07 3.3E-11 79.8 13.0 130 5-187 224-358 (409)
66 2vdu_B TRNA (guanine-N(7)-)-me 98.5 4.5E-06 1.5E-10 74.0 16.4 139 4-189 246-399 (450)
67 2ism_A Putative oxidoreductase 98.5 1.2E-06 4E-11 77.9 12.6 132 5-180 36-177 (352)
68 2p4o_A Hypothetical protein; p 98.5 2.4E-06 8.3E-11 72.9 13.6 115 12-187 128-245 (306)
69 1q7f_A NHL, brain tumor CG1071 98.5 4.3E-06 1.5E-10 68.9 14.1 99 5-153 169-268 (286)
70 3v64_C Agrin; beta propeller, 98.5 2.8E-06 9.6E-11 75.2 13.8 112 5-180 121-233 (349)
71 3v65_B Low-density lipoprotein 98.5 1.1E-06 3.7E-11 78.9 11.2 101 5-154 164-265 (386)
72 1q7f_A NHL, brain tumor CG1071 98.4 3.7E-06 1.3E-10 69.3 12.8 99 5-153 126-224 (286)
73 2vdu_B TRNA (guanine-N(7)-)-me 98.4 1.6E-05 5.3E-10 70.5 17.3 66 59-154 104-169 (450)
74 3sre_A PON1, serum paraoxonase 98.4 1.1E-05 3.7E-10 73.5 16.7 126 12-202 127-270 (355)
75 3mbr_X Glutamine cyclotransfer 98.4 5.2E-06 1.8E-10 72.5 13.9 133 5-214 26-160 (243)
76 3nol_A Glutamine cyclotransfer 98.4 4.5E-06 1.5E-10 73.8 13.6 117 6-162 131-249 (262)
77 2g8s_A Glucose/sorbosone dehyd 98.4 4.2E-06 1.4E-10 74.5 12.9 139 4-180 22-172 (353)
78 3p5b_L Low density lipoprotein 98.4 8.8E-06 3E-10 73.5 15.0 100 5-153 164-264 (400)
79 3e5z_A Putative gluconolactona 98.4 9.7E-06 3.3E-10 67.5 14.0 118 5-186 74-206 (296)
80 1rwi_B Serine/threonine-protei 98.4 8.8E-06 3E-10 65.9 13.4 109 5-180 155-263 (270)
81 3dr2_A Exported gluconolactona 98.4 1.4E-05 4.9E-10 67.5 15.1 102 5-154 91-207 (305)
82 3nok_A Glutaminyl cyclase; bet 98.3 4.4E-06 1.5E-10 74.2 12.1 132 5-214 60-191 (268)
83 3mbr_X Glutamine cyclotransfer 98.3 7E-06 2.4E-10 71.7 12.9 111 9-186 72-182 (243)
84 1ijq_A LDL receptor, low-densi 98.3 1.3E-05 4.4E-10 69.6 14.4 104 5-153 35-138 (316)
85 3sov_A LRP-6, low-density lipo 98.3 5.5E-06 1.9E-10 72.9 12.0 101 5-154 84-185 (318)
86 3a9g_A Putative uncharacterize 98.3 1.8E-05 6.3E-10 70.5 15.4 132 5-180 34-177 (354)
87 1rwi_B Serine/threonine-protei 98.3 1.1E-05 3.8E-10 65.3 12.3 96 5-153 72-167 (270)
88 2ojh_A Uncharacterized protein 98.3 2.7E-05 9.3E-10 61.9 14.1 101 5-153 134-235 (297)
89 1k8k_C P40, ARP2/3 complex 41 98.3 7.9E-05 2.7E-09 62.2 17.5 103 4-153 13-115 (372)
90 2qe8_A Uncharacterized protein 98.3 1.6E-05 5.5E-10 68.8 13.6 80 5-87 125-224 (343)
91 2ghs_A AGR_C_1268P; regucalcin 98.2 5.3E-05 1.8E-09 65.3 16.6 115 5-184 95-213 (326)
92 2z3z_A Dipeptidyl aminopeptida 98.2 3E-05 1E-09 72.1 15.9 104 4-153 262-374 (706)
93 3kya_A Putative phosphatase; s 98.2 1.4E-05 4.8E-10 76.1 13.8 118 4-180 143-277 (496)
94 3m0c_C LDL receptor, low-densi 98.2 1.7E-05 5.8E-10 79.0 14.8 101 5-154 476-577 (791)
95 2ojh_A Uncharacterized protein 98.2 1.8E-05 6.1E-10 63.0 12.2 99 5-153 90-191 (297)
96 1pjx_A Dfpase, DIISOPROPYLFLUO 98.2 2.8E-05 9.4E-10 64.2 13.4 29 60-88 174-206 (314)
97 1n7d_A LDL receptor, low-densi 98.2 3.8E-06 1.3E-10 81.7 8.9 101 5-154 458-559 (699)
98 2hqs_A Protein TOLB; TOLB, PAL 98.2 2.7E-05 9.3E-10 69.4 13.7 118 4-187 227-348 (415)
99 1gxr_A ESG1, transducin-like e 98.2 8.5E-05 2.9E-09 60.7 15.6 105 4-153 56-160 (337)
100 2dg1_A DRP35, lactonase; beta 98.2 9.2E-05 3.1E-09 62.0 16.1 102 5-153 92-200 (333)
101 2fp8_A Strictosidine synthase; 98.2 5.2E-05 1.8E-09 64.6 14.5 60 60-153 187-246 (322)
102 4h5i_A Guanine nucleotide-exch 98.2 0.00011 3.7E-09 64.1 16.8 105 4-153 224-331 (365)
103 2qc5_A Streptogramin B lactona 98.1 0.00012 4.2E-09 59.3 15.8 114 4-187 150-263 (300)
104 1gxr_A ESG1, transducin-like e 98.1 0.00022 7.6E-09 58.2 17.3 101 4-153 102-202 (337)
105 4a0p_A LRP6, LRP-6, low-densit 98.1 2E-05 6.9E-10 76.0 12.6 99 5-153 85-184 (628)
106 3azo_A Aminopeptidase; POP fam 98.1 2.7E-05 9.3E-10 71.9 12.6 71 4-88 134-225 (662)
107 2ecf_A Dipeptidyl peptidase IV 98.1 3.3E-05 1.1E-09 72.1 13.1 113 4-153 41-170 (741)
108 3zwl_B Eukaryotic translation 98.1 0.00019 6.6E-09 59.2 16.1 98 4-153 37-134 (369)
109 3v65_B Low-density lipoprotein 98.1 7.5E-05 2.6E-09 66.9 14.4 100 5-153 121-220 (386)
110 2z2n_A Virginiamycin B lyase; 98.1 0.00017 5.8E-09 58.4 15.2 109 4-179 145-253 (299)
111 2hqs_A Protein TOLB; TOLB, PAL 98.1 0.00018 6E-09 64.1 16.7 99 4-153 183-285 (415)
112 3v64_C Agrin; beta propeller, 98.1 0.00019 6.5E-09 63.4 16.7 135 5-212 164-301 (349)
113 3o4h_A Acylamino-acid-releasin 98.0 8.2E-05 2.8E-09 68.0 13.8 114 5-187 115-231 (582)
114 4hw6_A Hypothetical protein, I 98.0 0.00019 6.4E-09 65.8 16.0 139 5-180 278-432 (433)
115 2qc5_A Streptogramin B lactona 98.0 0.00027 9.1E-09 57.3 14.9 107 4-179 192-298 (300)
116 2z2n_A Virginiamycin B lyase; 98.0 0.0003 1E-08 57.0 15.0 67 4-87 187-253 (299)
117 3pe7_A Oligogalacturonate lyas 98.0 1.5E-05 5.2E-10 67.7 7.5 130 4-180 242-383 (388)
118 3fm0_A Protein CIAO1; WDR39,SG 98.0 0.0005 1.7E-08 58.8 16.7 104 4-153 66-169 (345)
119 3zwl_B Eukaryotic translation 97.9 0.00056 1.9E-08 56.4 16.3 99 4-153 180-278 (369)
120 3s94_A LRP-6, low-density lipo 97.9 6.7E-05 2.3E-09 72.2 12.3 101 5-154 89-190 (619)
121 2aq5_A Coronin-1A; WD40 repeat 97.9 0.00021 7.2E-09 61.8 14.3 104 4-153 181-286 (402)
122 3fm0_A Protein CIAO1; WDR39,SG 97.9 0.00055 1.9E-08 58.6 16.6 104 4-153 21-124 (345)
123 3i2n_A WD repeat-containing pr 97.9 0.00032 1.1E-08 57.9 14.6 76 4-90 214-292 (357)
124 3m0c_C LDL receptor, low-densi 97.9 0.00018 6.3E-09 71.5 15.4 137 5-212 519-658 (791)
125 2fp8_A Strictosidine synthase; 97.9 0.00037 1.3E-08 59.2 15.3 111 5-180 190-312 (322)
126 4aez_A CDC20, WD repeat-contai 97.9 0.00059 2E-08 59.2 16.7 102 4-153 264-368 (401)
127 3p5b_L Low density lipoprotein 97.9 0.00048 1.6E-08 62.1 16.5 104 4-153 116-220 (400)
128 3azo_A Aminopeptidase; POP fam 97.9 0.00056 1.9E-08 63.1 17.2 71 5-87 193-270 (662)
129 3frx_A Guanine nucleotide-bind 97.9 0.0008 2.7E-08 56.9 16.7 105 4-153 201-305 (319)
130 3ow8_A WD repeat-containing pr 97.9 0.00075 2.6E-08 57.6 16.5 99 4-153 127-225 (321)
131 1k8k_C P40, ARP2/3 complex 41 97.9 0.001 3.6E-08 55.3 16.8 72 4-88 101-172 (372)
132 1r5m_A SIR4-interacting protei 97.9 0.0014 4.9E-08 55.0 17.7 111 4-153 50-168 (425)
133 2g8s_A Glucose/sorbosone dehyd 97.9 0.00028 9.6E-09 62.6 13.9 67 4-77 70-148 (353)
134 3f3f_A Nucleoporin SEH1; struc 97.8 0.0028 9.4E-08 51.1 18.3 72 4-89 16-90 (351)
135 3mkq_A Coatomer beta'-subunit; 97.8 0.00051 1.7E-08 64.2 15.7 99 4-153 18-116 (814)
136 4h5i_A Guanine nucleotide-exch 97.8 0.00041 1.4E-08 60.4 14.1 99 5-153 139-238 (365)
137 2xyi_A Probable histone-bindin 97.8 0.00014 4.9E-09 64.2 10.9 104 5-153 237-340 (430)
138 1n7d_A LDL receptor, low-densi 97.8 2.2E-05 7.6E-10 76.3 6.2 104 5-153 411-514 (699)
139 1cru_A Protein (soluble quinop 97.8 0.0007 2.4E-08 62.7 15.7 112 4-153 31-161 (454)
140 3ow8_A WD repeat-containing pr 97.8 0.00084 2.9E-08 57.3 15.1 99 4-153 169-267 (321)
141 3c5m_A Oligogalacturonate lyas 97.8 0.0004 1.4E-08 58.5 12.8 36 137-187 353-388 (396)
142 3lrv_A PRE-mRNA-splicing facto 97.8 0.00068 2.3E-08 57.5 14.1 70 4-89 175-244 (343)
143 4a0p_A LRP6, LRP-6, low-densit 97.7 0.00053 1.8E-08 66.1 14.9 100 5-153 394-495 (628)
144 2ism_A Putative oxidoreductase 97.7 0.00038 1.3E-08 61.6 12.8 65 5-77 80-153 (352)
145 3mmy_A MRNA export factor; mRN 97.7 0.0029 1E-07 52.0 17.2 100 4-153 44-148 (368)
146 2ynn_A Coatomer subunit beta'; 97.7 0.0012 4.2E-08 55.3 15.1 107 4-161 18-126 (304)
147 1nr0_A Actin interacting prote 97.7 0.00045 1.6E-08 64.2 13.6 102 5-153 454-555 (611)
148 3sov_A LRP-6, low-density lipo 97.7 0.00034 1.2E-08 61.4 12.2 101 5-153 40-140 (318)
149 4aow_A Guanine nucleotide-bind 97.7 0.0019 6.5E-08 53.0 16.0 105 5-153 221-325 (340)
150 2ymu_A WD-40 repeat protein; u 97.7 0.0008 2.7E-08 60.2 14.6 96 5-153 22-117 (577)
151 3qqz_A Putative uncharacterize 97.7 0.0027 9.4E-08 55.1 17.4 108 5-153 32-139 (255)
152 3s94_A LRP-6, low-density lipo 97.7 0.00041 1.4E-08 66.7 13.2 102 4-153 44-145 (619)
153 4gqb_B Methylosome protein 50; 97.7 0.00037 1.3E-08 60.8 11.8 100 4-153 219-318 (344)
154 3ei3_B DNA damage-binding prot 97.7 0.0015 5.2E-08 55.5 15.4 101 4-153 168-270 (383)
155 4g56_B MGC81050 protein; prote 97.7 0.00014 4.7E-09 63.1 8.8 106 5-153 48-158 (357)
156 4ery_A WD repeat-containing pr 97.7 0.0025 8.7E-08 52.7 16.1 99 4-153 28-126 (312)
157 1xfd_A DIP, dipeptidyl aminope 97.7 0.00094 3.2E-08 61.9 14.8 30 58-87 255-287 (723)
158 3das_A Putative oxidoreductase 97.7 0.00081 2.8E-08 61.0 14.1 135 5-180 37-182 (347)
159 4aez_A CDC20, WD repeat-contai 97.7 0.0016 5.5E-08 56.4 15.4 99 4-153 222-322 (401)
160 3amr_A 3-phytase; beta-propell 97.7 0.00038 1.3E-08 64.0 12.0 125 3-184 75-213 (355)
161 2aq5_A Coronin-1A; WD40 repeat 97.7 8.4E-05 2.9E-09 64.3 7.2 74 3-89 224-299 (402)
162 1erj_A Transcriptional repress 97.7 0.0019 6.4E-08 56.3 15.7 110 4-153 69-184 (393)
163 1pgu_A Actin interacting prote 97.6 0.0005 1.7E-08 61.4 12.1 103 4-153 23-135 (615)
164 4gqb_B Methylosome protein 50; 97.6 0.00071 2.4E-08 58.9 12.7 69 5-89 133-201 (344)
165 3jrp_A Fusion protein of prote 97.6 0.0065 2.2E-07 50.3 17.8 102 5-153 17-122 (379)
166 1sq9_A Antiviral protein SKI8; 97.6 0.0029 1E-07 53.4 15.9 87 4-100 238-330 (397)
167 1r5m_A SIR4-interacting protei 97.6 0.00099 3.4E-08 56.0 12.9 68 4-89 294-361 (425)
168 4ery_A WD repeat-containing pr 97.6 0.0028 9.7E-08 52.4 15.4 99 5-153 113-211 (312)
169 1erj_A Transcriptional repress 97.6 0.003 1E-07 55.0 16.1 98 4-153 128-226 (393)
170 3dwl_C Actin-related protein 2 97.6 0.0003 1E-08 59.4 9.3 72 4-88 105-176 (377)
171 3pe7_A Oligogalacturonate lyas 97.6 0.00035 1.2E-08 59.3 9.6 71 4-88 192-272 (388)
172 2z3z_A Dipeptidyl aminopeptida 97.6 0.0032 1.1E-07 58.5 16.9 30 58-87 258-291 (706)
173 1got_B GT-beta; complex (GTP-b 97.6 0.0035 1.2E-07 53.3 15.9 101 4-153 189-289 (340)
174 2gop_A Trilobed protease; beta 97.6 0.0031 1.1E-07 52.7 15.1 56 4-76 63-122 (347)
175 1k32_A Tricorn protease; prote 97.6 0.00028 9.6E-09 70.0 10.0 44 137-197 610-657 (1045)
176 3jrp_A Fusion protein of prote 97.6 0.0046 1.6E-07 51.2 16.0 107 4-153 152-275 (379)
177 1xfd_A DIP, dipeptidyl aminope 97.5 0.001 3.5E-08 61.7 13.1 110 4-153 310-428 (723)
178 2ymu_A WD-40 repeat protein; u 97.5 0.00052 1.8E-08 61.4 10.6 96 5-153 473-568 (577)
179 3mkq_A Coatomer beta'-subunit; 97.5 0.0032 1.1E-07 58.8 16.3 100 4-153 60-160 (814)
180 2hes_X YDR267CP; beta-propelle 97.5 0.006 2E-07 51.8 16.6 105 4-153 63-172 (330)
181 1nr0_A Actin interacting prote 97.5 0.0017 5.8E-08 60.3 14.2 100 4-153 23-122 (611)
182 3lrv_A PRE-mRNA-splicing facto 97.5 0.0014 4.8E-08 55.6 11.9 102 4-153 130-233 (343)
183 3sre_A PON1, serum paraoxonase 97.5 0.00057 1.9E-08 62.2 10.0 86 59-179 222-309 (355)
184 3dwl_C Actin-related protein 2 97.5 0.00064 2.2E-08 57.4 9.6 105 4-153 60-165 (377)
185 3k26_A Polycomb protein EED; W 97.4 0.0063 2.2E-07 50.1 15.2 104 4-153 23-135 (366)
186 3sbq_A Nitrous-oxide reductase 97.4 0.00086 3E-08 65.7 11.4 146 6-194 329-489 (638)
187 3iz6_a 40S ribosomal protein R 97.4 0.0064 2.2E-07 52.6 15.8 110 4-153 254-363 (380)
188 3k26_A Polycomb protein EED; W 97.4 0.0064 2.2E-07 50.1 14.8 102 4-153 74-180 (366)
189 2ecf_A Dipeptidyl peptidase IV 97.4 0.0013 4.6E-08 61.2 11.9 70 4-89 341-413 (741)
190 2oit_A Nucleoporin 214KDA; NH2 97.4 0.0011 3.9E-08 59.8 11.0 107 4-153 97-211 (434)
191 1got_B GT-beta; complex (GTP-b 97.4 0.0077 2.6E-07 51.1 15.6 101 4-153 231-331 (340)
192 3a9g_A Putative uncharacterize 97.4 0.0052 1.8E-07 54.6 15.0 63 5-76 78-152 (354)
193 2pbi_B Guanine nucleotide-bind 97.4 0.0068 2.3E-07 52.2 15.2 100 5-153 246-345 (354)
194 4a11_B DNA excision repair pro 97.3 0.0045 1.5E-07 51.8 13.4 82 4-89 191-276 (408)
195 3dw8_B Serine/threonine-protei 97.3 0.0048 1.6E-07 52.9 13.7 75 5-89 183-258 (447)
196 3dw8_B Serine/threonine-protei 97.3 0.002 6.9E-08 55.3 11.4 82 4-89 231-315 (447)
197 3amr_A 3-phytase; beta-propell 97.3 0.014 4.8E-07 53.6 17.4 115 8-180 138-262 (355)
198 1vyh_C Platelet-activating fac 97.3 0.0035 1.2E-07 55.1 13.0 99 4-153 113-211 (410)
199 3vl1_A 26S proteasome regulato 97.3 0.0094 3.2E-07 50.8 15.1 76 4-99 144-219 (420)
200 2ynn_A Coatomer subunit beta'; 97.3 0.023 7.8E-07 47.4 17.1 68 5-89 61-128 (304)
201 4g56_B MGC81050 protein; prote 97.3 0.0019 6.5E-08 55.9 10.7 100 4-153 231-331 (357)
202 3sfz_A APAF-1, apoptotic pepti 97.3 0.00023 8E-09 70.4 5.5 105 4-153 1132-1237(1249)
203 1pgu_A Actin interacting prote 97.3 0.003 1E-07 56.3 12.2 69 4-86 69-148 (615)
204 3frx_A Guanine nucleotide-bind 97.3 0.014 4.8E-07 49.2 15.8 105 4-153 22-126 (319)
205 1yfq_A Cell cycle arrest prote 97.3 0.0041 1.4E-07 51.2 12.1 81 4-89 198-282 (342)
206 1k32_A Tricorn protease; prote 97.3 0.0018 6.2E-08 64.2 11.6 100 4-154 383-491 (1045)
207 2pm9_A Protein WEB1, protein t 97.2 0.005 1.7E-07 52.1 12.8 77 4-89 170-249 (416)
208 3vl1_A 26S proteasome regulato 97.2 0.0091 3.1E-07 50.9 14.5 97 6-153 104-200 (420)
209 1sq9_A Antiviral protein SKI8; 97.2 0.012 4.2E-07 49.5 15.0 111 4-153 126-252 (397)
210 2pm9_A Protein WEB1, protein t 97.2 0.0057 2E-07 51.8 13.0 102 4-153 219-324 (416)
211 2xzm_R RACK1; ribosome, transl 97.2 0.01 3.5E-07 50.4 14.6 68 4-89 218-285 (343)
212 1z68_A Fibroblast activation p 97.2 0.00095 3.3E-08 62.3 8.6 100 5-153 21-128 (719)
213 3i2n_A WD repeat-containing pr 97.2 0.021 7.2E-07 46.9 15.7 66 6-89 175-243 (357)
214 2xdw_A Prolyl endopeptidase; a 97.2 0.0069 2.4E-07 57.3 14.2 59 60-153 127-189 (710)
215 2oaj_A Protein SNI1; WD40 repe 97.2 0.0088 3E-07 59.3 15.5 83 58-186 576-667 (902)
216 3gre_A Serine/threonine-protei 97.2 0.0094 3.2E-07 51.5 13.8 80 3-100 174-253 (437)
217 3mmy_A MRNA export factor; mRN 97.1 0.0061 2.1E-07 50.1 11.8 61 59-154 275-335 (368)
218 3odt_A Protein DOA1; ubiquitin 97.1 0.011 3.7E-07 47.7 12.7 96 4-153 189-284 (313)
219 2pbi_B Guanine nucleotide-bind 97.1 0.022 7.5E-07 48.9 15.3 100 5-153 202-303 (354)
220 2gop_A Trilobed protease; beta 97.1 0.02 7E-07 47.6 14.7 27 61-88 174-206 (347)
221 2hes_X YDR267CP; beta-propelle 97.0 0.032 1.1E-06 47.2 15.9 72 4-89 112-184 (330)
222 3vu4_A KMHSV2; beta-propeller 97.0 0.018 6.2E-07 49.5 14.5 72 4-90 200-272 (355)
223 2xzm_R RACK1; ribosome, transl 97.0 0.041 1.4E-06 46.6 16.4 100 8-153 35-137 (343)
224 1yfq_A Cell cycle arrest prote 97.0 0.013 4.5E-07 48.1 12.9 112 4-153 155-270 (342)
225 1z68_A Fibroblast activation p 97.0 0.0027 9.2E-08 59.3 9.6 67 4-88 64-138 (719)
226 3ei3_B DNA damage-binding prot 97.0 0.026 9E-07 47.8 14.6 69 4-87 123-192 (383)
227 2wg3_C Hedgehog-interacting pr 97.0 0.0068 2.3E-07 56.6 11.9 141 4-181 18-186 (463)
228 2xdw_A Prolyl endopeptidase; a 96.9 0.035 1.2E-06 52.5 16.8 57 5-77 130-190 (710)
229 1vyh_C Platelet-activating fac 96.9 0.014 4.9E-07 51.2 13.2 98 5-153 156-253 (410)
230 3o4h_A Acylamino-acid-releasin 96.9 0.0074 2.5E-07 55.0 11.4 70 4-89 26-97 (582)
231 3gre_A Serine/threonine-protei 96.9 0.048 1.6E-06 47.0 15.7 108 4-153 116-233 (437)
232 4a5s_A Dipeptidyl peptidase 4 96.8 0.026 9E-07 53.7 14.9 31 58-88 260-293 (740)
233 3vu4_A KMHSV2; beta-propeller 96.8 0.046 1.6E-06 46.9 15.2 63 58-153 196-259 (355)
234 3sfz_A APAF-1, apoptotic pepti 96.8 0.021 7.3E-07 56.4 14.5 76 4-99 620-695 (1249)
235 4a11_B DNA excision repair pro 96.8 0.081 2.8E-06 44.1 16.1 79 4-89 48-131 (408)
236 1cru_A Protein (soluble quinop 96.8 0.032 1.1E-06 51.5 14.8 121 58-211 27-151 (454)
237 3sbq_A Nitrous-oxide reductase 96.8 0.0019 6.5E-08 63.3 6.7 114 7-153 244-395 (638)
238 3no2_A Uncharacterized protein 96.8 0.071 2.4E-06 45.1 15.8 116 6-186 83-198 (276)
239 3f3f_A Nucleoporin SEH1; struc 96.8 0.072 2.4E-06 42.7 15.1 71 4-89 172-249 (351)
240 3dm0_A Maltose-binding peripla 96.8 0.033 1.1E-06 52.1 14.9 104 4-153 387-491 (694)
241 2pm7_B Protein transport prote 96.7 0.043 1.5E-06 45.6 14.0 71 4-89 14-86 (297)
242 3jro_A Fusion protein of prote 96.7 0.058 2E-06 51.7 16.6 103 4-153 14-120 (753)
243 4aow_A Guanine nucleotide-bind 96.7 0.1 3.5E-06 42.5 16.0 73 5-89 44-117 (340)
244 4ggc_A P55CDC, cell division c 96.7 0.08 2.7E-06 42.7 15.0 74 5-98 31-104 (318)
245 3c5m_A Oligogalacturonate lyas 96.7 0.015 5E-07 48.9 10.9 70 4-87 192-271 (396)
246 4gga_A P55CDC, cell division c 96.6 0.058 2E-06 46.9 14.7 96 5-153 111-206 (420)
247 2j04_A TAU60, YPL007P, hypothe 96.6 0.017 5.8E-07 56.2 12.2 72 3-89 89-160 (588)
248 3odt_A Protein DOA1; ubiquitin 96.6 0.073 2.5E-06 42.7 14.2 72 5-94 24-95 (313)
249 3iz6_a 40S ribosomal protein R 96.6 0.095 3.2E-06 45.2 15.7 106 5-153 211-317 (380)
250 2oaj_A Protein SNI1; WD40 repe 96.5 0.047 1.6E-06 54.1 14.8 96 4-153 22-117 (902)
251 3das_A Putative oxidoreductase 96.5 0.013 4.4E-07 53.1 9.9 63 5-76 85-157 (347)
252 4e54_B DNA damage-binding prot 96.5 0.045 1.5E-06 48.0 12.9 69 5-88 125-195 (435)
253 4a5s_A Dipeptidyl peptidase 4 96.4 0.037 1.2E-06 52.7 12.7 71 5-88 22-100 (740)
254 3dm0_A Maltose-binding peripla 96.3 0.06 2.1E-06 50.3 13.6 99 4-153 522-621 (694)
255 2pm7_B Protein transport prote 96.3 0.32 1.1E-05 40.2 16.6 63 15-89 173-238 (297)
256 2j04_A TAU60, YPL007P, hypothe 96.3 0.15 5.1E-06 49.6 16.2 72 5-89 135-211 (588)
257 2w18_A PALB2, fancn, partner a 96.2 0.11 3.9E-06 47.5 14.6 63 59-153 180-245 (356)
258 3v7d_B Cell division control p 96.2 0.22 7.5E-06 43.2 15.6 96 4-153 315-410 (464)
259 3bg1_A Protein SEC13 homolog; 96.2 0.18 6E-06 42.3 14.5 69 5-88 19-89 (316)
260 2p9w_A MAL S 1 allergenic prot 96.1 0.044 1.5E-06 49.9 11.0 123 5-154 18-155 (334)
261 4e54_B DNA damage-binding prot 96.1 0.019 6.4E-07 50.5 8.4 69 5-88 170-239 (435)
262 3jro_A Fusion protein of prote 96.0 0.17 5.8E-06 48.5 15.0 70 5-89 59-132 (753)
263 2p9w_A MAL S 1 allergenic prot 96.0 0.1 3.4E-06 47.5 12.8 73 5-89 142-215 (334)
264 2oit_A Nucleoporin 214KDA; NH2 95.9 0.23 7.7E-06 44.7 14.9 69 4-88 154-222 (434)
265 4gq1_A NUP37; propeller, trans 95.9 0.12 4.1E-06 45.0 12.5 59 20-89 109-175 (393)
266 4gq1_A NUP37; propeller, trans 95.9 0.13 4.4E-06 44.8 12.6 108 8-153 264-378 (393)
267 3qqz_A Putative uncharacterize 95.8 0.16 5.3E-06 44.0 12.8 79 54-182 23-101 (255)
268 3s25_A Hypothetical 7-bladed b 95.8 0.034 1.2E-06 48.7 8.6 64 5-88 109-175 (302)
269 3no2_A Uncharacterized protein 95.7 0.26 9.1E-06 41.5 13.8 75 5-101 42-116 (276)
270 3iuj_A Prolyl endopeptidase; h 95.7 0.43 1.5E-05 45.3 16.3 55 5-76 134-192 (693)
271 4gga_A P55CDC, cell division c 95.7 0.31 1.1E-05 42.3 14.3 102 4-153 235-339 (420)
272 1yr2_A Prolyl oligopeptidase; 95.6 0.21 7.3E-06 47.5 14.2 31 59-89 269-303 (741)
273 3bg1_A Protein SEC13 homolog; 95.6 0.11 3.9E-06 43.5 11.0 62 15-89 182-247 (316)
274 3v7d_B Cell division control p 95.6 0.39 1.3E-05 41.6 14.7 57 62-153 273-329 (464)
275 2bkl_A Prolyl endopeptidase; m 95.6 0.14 4.8E-06 48.2 12.7 30 59-88 122-155 (695)
276 2ovr_B FBW7, F-BOX/WD repeat p 95.3 0.5 1.7E-05 41.0 14.4 62 60-153 365-426 (445)
277 2xe4_A Oligopeptidase B; hydro 95.3 0.27 9.2E-06 47.6 13.6 55 5-76 179-239 (751)
278 2bkl_A Prolyl endopeptidase; m 95.1 0.31 1.1E-05 45.9 13.1 73 5-88 173-258 (695)
279 3s25_A Hypothetical 7-bladed b 95.0 0.062 2.1E-06 47.0 7.6 63 6-87 151-214 (302)
280 1yr2_A Prolyl oligopeptidase; 94.9 1 3.5E-05 42.8 16.2 30 59-88 164-197 (741)
281 4ggc_A P55CDC, cell division c 94.6 0.24 8.2E-06 39.9 9.7 70 4-89 245-315 (318)
282 2xe4_A Oligopeptidase B; hydro 93.8 0.77 2.6E-05 44.3 13.0 72 5-88 226-303 (751)
283 2j04_B YDR362CP, TAU91; beta p 93.4 0.84 2.9E-05 42.5 12.1 69 5-89 272-342 (524)
284 3q6k_A 43.2 kDa salivary prote 93.1 1.7 5.7E-05 39.9 13.3 104 22-153 123-242 (381)
285 2j04_B YDR362CP, TAU91; beta p 92.8 0.27 9.2E-06 45.9 7.7 71 5-89 316-386 (524)
286 2wg3_C Hedgehog-interacting pr 92.1 2.2 7.4E-05 39.6 12.9 63 5-76 74-156 (463)
287 3iuj_A Prolyl endopeptidase; h 92.1 4.3 0.00015 38.3 15.2 30 59-88 130-163 (693)
288 2w18_A PALB2, fancn, partner a 89.6 11 0.00037 34.4 14.8 79 9-96 50-148 (356)
289 3ei3_A DNA damage-binding prot 88.9 6.7 0.00023 40.5 14.3 105 20-187 530-642 (1158)
290 1kb0_A Quinohemoprotein alcoho 88.8 12 0.0004 35.8 15.1 88 4-101 247-355 (677)
291 2ad6_A Methanol dehydrogenase 87.5 7 0.00024 36.6 12.4 16 62-77 390-405 (571)
292 2ad6_A Methanol dehydrogenase 86.9 17 0.00058 34.0 14.7 89 5-103 240-346 (571)
293 1p22_A F-BOX/WD-repeat protein 83.7 20 0.00069 30.7 14.4 27 60-89 259-285 (435)
294 1kb0_A Quinohemoprotein alcoho 82.6 19 0.00066 34.3 13.1 15 62-76 397-411 (677)
295 3q6k_A 43.2 kDa salivary prote 82.3 27 0.00094 31.8 13.5 30 60-89 277-306 (381)
296 4a9v_A PHOX; hydrolase, beta-p 82.2 6.6 0.00023 38.3 9.7 64 58-153 476-549 (592)
297 2ovr_B FBW7, F-BOX/WD repeat p 81.9 24 0.00081 30.2 13.0 66 5-89 123-188 (445)
298 3hxj_A Pyrrolo-quinoline quino 78.7 18 0.00062 29.1 10.0 23 60-86 179-201 (330)
299 1xip_A Nucleoporin NUP159; bet 77.6 37 0.0013 30.6 12.7 63 5-89 93-155 (388)
300 1p22_A F-BOX/WD-repeat protein 77.2 34 0.0012 29.3 15.0 27 60-89 216-242 (435)
301 1xip_A Nucleoporin NUP159; bet 74.1 47 0.0016 29.9 12.4 66 4-89 42-115 (388)
302 3zwu_A Alkaline phosphatase PH 69.9 9.5 0.00032 36.9 7.1 19 59-78 477-495 (592)
303 4a9v_A PHOX; hydrolase, beta-p 69.4 13 0.00044 36.3 7.8 23 58-80 531-553 (592)
304 3hxj_A Pyrrolo-quinoline quino 69.1 43 0.0015 26.9 11.0 24 60-85 217-240 (330)
305 3zwu_A Alkaline phosphatase PH 58.9 33 0.0011 33.1 8.5 19 58-76 531-549 (592)
306 1kv9_A Type II quinohemoprotei 58.7 1.2E+02 0.0042 28.6 16.6 86 5-101 235-342 (668)
307 1yiq_A Quinohemoprotein alcoho 58.1 86 0.003 29.8 11.3 34 64-101 481-514 (689)
308 1flg_A Protein (quinoprotein e 55.9 1.3E+02 0.0045 28.0 16.8 16 138-153 415-430 (582)
309 3q7m_A Lipoprotein YFGL, BAMB; 50.6 1.1E+02 0.0037 25.5 11.8 19 68-87 238-256 (376)
310 1tl2_A L10, protein (tachylect 49.8 38 0.0013 29.3 6.6 70 4-91 45-116 (236)
311 1tl2_A L10, protein (tachylect 47.8 28 0.00096 30.2 5.4 61 9-88 2-66 (236)
312 1yiq_A Quinohemoprotein alcoho 42.4 86 0.0029 29.8 8.5 13 63-75 394-406 (689)
313 1kv9_A Type II quinohemoprotei 35.8 2.8E+02 0.0097 26.0 12.8 15 62-76 385-399 (668)
314 2xbg_A YCF48-like protein; pho 34.2 2E+02 0.0069 24.0 8.8 24 137-160 165-190 (327)
315 2jzk_A Cyanovirin-N homolog; C 32.1 1.5E+02 0.0053 21.9 6.8 56 137-214 10-70 (106)
316 1flg_A Protein (quinoprotein e 31.4 2.1E+02 0.0071 26.7 9.1 16 62-77 416-431 (582)
317 3q7m_A Lipoprotein YFGL, BAMB; 31.3 2.2E+02 0.0076 23.5 14.8 79 11-101 53-131 (376)
318 2hz6_A Endoplasmic reticulum t 31.3 36 0.0012 29.3 3.6 13 172-186 183-195 (369)
319 1w6s_A Methanol dehydrogenase 30.5 3.5E+02 0.012 25.5 17.6 17 137-153 395-411 (599)
320 2jzj_A Cyanovirin-N homolog; C 29.1 2E+02 0.0067 22.1 7.4 19 58-78 7-25 (124)
321 1w6s_A Methanol dehydrogenase 28.5 3.8E+02 0.013 25.2 14.8 47 139-187 245-291 (599)
322 3al9_A Plexin-A2; beta-propell 26.1 3.1E+02 0.011 25.8 9.3 83 60-159 20-106 (539)
323 2be1_A Serine/threonine-protei 26.0 1.4E+02 0.0047 26.5 6.5 21 12-34 11-31 (339)
324 2vlg_A Sporulation kinase A; h 25.7 28 0.00096 25.0 1.6 16 62-77 12-27 (111)
325 2l2f_A Cyanovirin-N homolog; l 22.6 2.3E+02 0.008 20.8 7.0 20 58-78 6-25 (108)
326 4fww_A Macrophage-stimulating 22.3 1.9E+02 0.0065 26.7 6.9 79 61-157 18-99 (527)
327 1sqj_A OXG-RCBH, oligoxylogluc 21.8 5.1E+02 0.017 25.0 10.1 73 4-89 125-199 (789)
328 2cn3_A Xyloglucanase, beta-1,4 21.4 2.3E+02 0.0079 27.0 7.5 76 4-89 27-110 (737)
329 3f1p_A Endothelial PAS domain- 20.1 60 0.0021 21.6 2.3 18 60-77 10-27 (117)
No 1
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=100.00 E-value=8.7e-62 Score=459.80 Aligned_cols=195 Identities=46% Similarity=0.876 Sum_probs=177.6
Q ss_pred CeEeEEEcCCCCeEEEEec-----cCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCC-------CceeEEEEcCC
Q 027522 1 MQIRFLHDPSKDIGFVGCA-----LASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMP-------GLITDFLISLD 68 (222)
Q Consensus 1 levr~afhP~g~~aYvv~E-----LsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~-------~~~adI~iSpD 68 (222)
+||||+|||+++++||+|| |+++|++|+++. |+|+++|+|++++.++.+ .+++|+ +.+++|+||||
T Consensus 254 ~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~~~~vIdi~~~~v~~-~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 254 LELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED-GKWNAEKVIEIPAEPLEG-NLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET-TEEEEEEEEEECCEECCS-SCCGGGGGGTEECCCCCCEEECTT
T ss_pred ceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC-CceeEEEEEeCCCccccc-cccccccccccCCCceeEEEECCC
Confidence 4899999999999999999 999999999975 999999999988766654 344443 67899999999
Q ss_pred CCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCE
Q 027522 69 DRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKR 148 (222)
Q Consensus 69 grfLYvSnRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~ 148 (222)
|||||||||+||+|+||+|+++++++++++|++||.+. +|+.+ +|+++.|+||+|+|||||||
T Consensus 332 GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~---------------~~~~~--~G~~~~ggPr~~~lSpDGk~ 394 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFH---------------RADHP--AGHKLTGAPQMLEISRDGRR 394 (462)
T ss_dssp SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTT---------------CBCCT--TSCCCCSCCCCEEECTTSSE
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeec---------------ccccc--ccccCCCCCCEEEEcCCCCE
Confidence 99999999999999999998888999999999999763 33322 68889999999999999999
Q ss_pred EEEEeCCCCccccccccccccCCcEEEEEEeeCCCCCeeeccceeEecCCCCCCCcceeeeecCCCCcCccccC
Q 027522 149 LYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 222 (222)
Q Consensus 149 LyvaNsl~~~wd~Q~yp~~~s~~~~i~~~dvd~~~G~l~~~~~f~vdf~~~~~g~~~~h~~r~~~gd~~sd~~~ 222 (222)
|||||+|||+||+||||+ +++++|+++|+|+++| |+++++|+|||++ +|||||||||||||||||+
T Consensus 395 LyVaNsl~~~wd~Qfyp~--~~~~~~~~~~vd~~~G-L~~~~~f~vdf~~-----~~~h~~r~~ggd~~sd~~~ 460 (462)
T 2ece_A 395 VYVTNSLYSTWDNQFYPE--GLKGWMVKLNANPSGG-LEIDKEFFVDFGE-----ARSHQVRLSGGDASSDSYC 460 (462)
T ss_dssp EEEECCCCHHHHHHHSTT--CCCCEEEEEEECTTSC-EEEEEEEEEECTT-----SEEEEEEETTCCTTTCCCS
T ss_pred EEEEcCCcccccccccCC--CCceEEEEEEecCCCC-ceeCCCEEeeccc-----CcceeeecCCCCcCccccc
Confidence 999999999999999999 7899999999999999 9999999999988 7999999999999999996
No 2
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.81 E-value=3.4e-18 Score=146.67 Aligned_cols=128 Identities=16% Similarity=0.292 Sum_probs=99.2
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCC-CCcE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWL-HGDI 82 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRg-h~sI 82 (222)
.++|+|+|+++|+.++.+++|.+|..+ +|++...+.+...+... ..+++|.+|||||+||+++++ ++.|
T Consensus 215 ~~~~spdg~~l~v~~~~~~~v~v~~~~-~g~~~~~~~~~~~~~~~---------~~~~~i~~spdg~~l~v~~~~~~~~i 284 (361)
T 3scy_A 215 HLIFNSDGKFAYLINEIGGTVIAFRYA-DGMLDEIQTVAADTVNA---------QGSGDIHLSPDGKYLYASNRLKADGV 284 (361)
T ss_dssp EEEECTTSSEEEEEETTTCEEEEEEEE-TTEEEEEEEEESCSSCC---------CCEEEEEECTTSSEEEEEECSSSCEE
T ss_pred EEEEcCCCCEEEEEcCCCCeEEEEEec-CCceEEeEEEecCCCCC---------CCcccEEECCCCCEEEEECCCCCCEE
Confidence 378999999999999999999999886 67777777666655432 335899999999999999999 9999
Q ss_pred EEEEecC-CCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCcccc
Q 027522 83 RQYNIED-PKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDC 161 (222)
Q Consensus 83 ~vf~i~d-~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~ 161 (222)
.+|+++. .++.+++..+.. |.. |+.|++||||++||++|
T Consensus 285 ~v~~~~~~~g~~~~~~~~~~----------------------------g~~----~~~~~~spdg~~l~~~~-------- 324 (361)
T 3scy_A 285 AIFKVDETNGTLTKVGYQLT----------------------------GIH----PRNFIITPNGKYLLVAC-------- 324 (361)
T ss_dssp EEEEECTTTCCEEEEEEEEC----------------------------SSC----CCEEEECTTSCEEEEEE--------
T ss_pred EEEEEcCCCCcEEEeeEecC----------------------------CCC----CceEEECCCCCEEEEEE--------
Confidence 9999952 223334444433 334 99999999999999999
Q ss_pred ccccccccCCcEEEEEEeeCCCCCeee
Q 027522 162 QFYPELKEKGSHMLQIDVNSEKGGMAI 188 (222)
Q Consensus 162 Q~yp~~~s~~~~i~~~dvd~~~G~l~~ 188 (222)
+. +..+..+++|.++|.++.
T Consensus 325 ~~-------~~~v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 325 RD-------TNVIQIFERDQATGLLTD 344 (361)
T ss_dssp TT-------TTEEEEEEECTTTCCEEE
T ss_pred CC-------CCCEEEEEEECCCCcEee
Confidence 53 445555556889999963
No 3
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.80 E-value=3.4e-18 Score=145.49 Aligned_cols=132 Identities=17% Similarity=0.226 Sum_probs=104.0
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCC-CCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQ-DGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDI 82 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~-~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI 82 (222)
.++|+|+|+++|+.++.+++|.+|..+. +|++...+.+...+..+.+. +.+.+|.+|||||+|||++++.+.|
T Consensus 191 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~------~~~~~i~~spdG~~l~v~~~~~~~v 264 (347)
T 3hfq_A 191 HLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAH------NGAAAIRLSHDGHFLYVSNRGYNTL 264 (347)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSC------CEEEEEEECTTSCEEEEEEETTTEE
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCC------CcceeEEECCCCCEEEEEeCCCCEE
Confidence 3699999999999999999999998863 67887777777666544332 4578999999999999999999999
Q ss_pred EEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCccccc
Q 027522 83 RQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQ 162 (222)
Q Consensus 83 ~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q 162 (222)
.+|+++..+..+++..+..+ |.. |+.+++||||++|||+| +
T Consensus 265 ~v~~~~~~g~~~~~~~~~~~---------------------------~~~----~~~~~~spdg~~l~v~~--------~ 305 (347)
T 3hfq_A 265 AVFAVTADGHLTLIQQISTE---------------------------GDF----PRDFDLDPTEAFVVVVN--------Q 305 (347)
T ss_dssp EEEEECGGGCEEEEEEEECS---------------------------SSC----CCEEEECTTSSEEEEEE--------T
T ss_pred EEEEECCCCcEEEeEEEecC---------------------------CCC----cCeEEECCCCCEEEEEE--------c
Confidence 99999543344554444432 344 99999999999999999 4
Q ss_pred cccccccCCcEEEEEEeeCCCCCee
Q 027522 163 FYPELKEKGSHMLQIDVNSEKGGMA 187 (222)
Q Consensus 163 ~yp~~~s~~~~i~~~dvd~~~G~l~ 187 (222)
++..+..+++|+++|.++
T Consensus 306 -------~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 306 -------NTDNATLYARDLTSGKLS 323 (347)
T ss_dssp -------TTTEEEEEEECTTTCCEE
T ss_pred -------CCCcEEEEEEeCCCCeEE
Confidence 345555566688999986
No 4
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.71 E-value=4.5e-16 Score=135.61 Aligned_cols=116 Identities=8% Similarity=0.063 Sum_probs=84.5
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeC-CCCCeeE-EEEEEecCcccccccCC-CCCCceeEEE-EcCCCCEEEEEeCCCC
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKT-QDGSWNH-EVAISVKSLKVQNWILP-EMPGLITDFL-ISLDDRFLYFSNWLHG 80 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d-~~g~~~~-~q~is~~p~~~~g~~~~-~~~~~~adI~-iSpDgrfLYvSnRgh~ 80 (222)
++|+|+|+++|+.+|++++|.+|.++ ++|++.. .+.+.+.|..+.+...+ .....+.+|. +|||||+||++||+++
T Consensus 198 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~ 277 (365)
T 1jof_A 198 VAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANK 277 (365)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESS
T ss_pred eEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCC
Confidence 68999999999999999999999886 3577765 45566665544332000 0000478999 9999999999999987
Q ss_pred -----cEEEEEecCCCCCeEEEE---EEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECC---CCCEE
Q 027522 81 -----DIRQYNIEDPKNPVLTGQ---IWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSL---DGKRL 149 (222)
Q Consensus 81 -----sI~vf~i~d~~~~~L~~~---v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lsp---dGk~L 149 (222)
+|++|+++. .+++... +.. .+. +|+.+++|| ||++|
T Consensus 278 ~~~~~~i~v~~~~~--~g~~~~~~~~~~~---------------------------~~~----~~~~~a~sp~~~dg~~l 324 (365)
T 1jof_A 278 FELQGYIAGFKLRD--CGSIEKQLFLSPT---------------------------PTS----GGHSNAVSPCPWSDEWM 324 (365)
T ss_dssp TTSCCEEEEEEECT--TSCEEEEEEEEEC---------------------------SSC----CTTCCCEEECTTCTTEE
T ss_pred CCCCCeEEEEEECC--CCCEEEeeeeeec---------------------------CCC----CcccceecCCCcCCCEE
Confidence 899999953 3444221 211 122 388999999 89999
Q ss_pred EEEe
Q 027522 150 YVTN 153 (222)
Q Consensus 150 yvaN 153 (222)
||+|
T Consensus 325 ~v~~ 328 (365)
T 1jof_A 325 AITD 328 (365)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 9999
No 5
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.68 E-value=5.7e-15 Score=122.54 Aligned_cols=135 Identities=16% Similarity=0.227 Sum_probs=103.0
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeC-CCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKT-QDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d-~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
++|+|+++++|+.++.+++|.+|..+ .+|++...+.+...+..+.+. ..+..|.+||||++||++++..+.|.
T Consensus 183 ~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~~~~i~~s~dg~~l~v~~~~~~~i~ 256 (343)
T 1ri6_A 183 MVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDT------RWAADIHITPDGRHLYACDRTASLIT 256 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSC------CCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcccccc------CCccceEECCCCCEEEEEecCCCEEE
Confidence 78999999999999999999999886 467787777776555544332 45689999999999999999999999
Q ss_pred EEEecC-CCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCccccc
Q 027522 84 QYNIED-PKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQ 162 (222)
Q Consensus 84 vf~i~d-~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q 162 (222)
+|+++. .++.+.+..+.. +.. |+.++++|||++||+++ +
T Consensus 257 v~d~~~~~~~~~~~~~~~~----------------------------~~~----~~~~~~s~dg~~l~~~~--------~ 296 (343)
T 1ri6_A 257 VFSVSEDGSVLSKEGFQPT----------------------------ETQ----PRGFNVDHSGKYLIAAG--------Q 296 (343)
T ss_dssp EEEECTTSCCEEEEEEEEC----------------------------SSS----CCCEEECTTSSEEEEEC--------T
T ss_pred EEEEcCCCCceEEeeeecC----------------------------CCc----cceEEECCCCCEEEEec--------C
Confidence 999953 223344444433 222 88999999999999999 3
Q ss_pred cccccccCCcEEEEEEeeCCCCCeeeccce
Q 027522 163 FYPELKEKGSHMLQIDVNSEKGGMAINPNF 192 (222)
Q Consensus 163 ~yp~~~s~~~~i~~~dvd~~~G~l~~~~~f 192 (222)
++..+..+++|+++|.++.-..+
T Consensus 297 -------~~~~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 297 -------KSHHISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp -------TTCEEEEEEEETTTTEEEEEEEE
T ss_pred -------CCCeEEEEEEcCCCceeeEcccc
Confidence 34566666778899988644433
No 6
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.58 E-value=5e-13 Score=113.53 Aligned_cols=135 Identities=14% Similarity=0.179 Sum_probs=94.9
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++|+|+|+++|+.+.-+.+|.+|..+.+|++.....+.......... .....+..+.+||||+ ||+++.+.+.|.+
T Consensus 91 ~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~---~~~~~~~~~~~spdg~-l~v~~~~~~~v~~ 166 (347)
T 3hfq_A 91 VAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPE---QDGSHIHYTDLTPDNR-LAVIDLGSDKVYV 166 (347)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTT---CSSCCEEEEEECTTSC-EEEEETTTTEEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCcc---ccCCCceEEEECCCCc-EEEEeCCCCEEEE
Confidence 68999999999999989999999987677776665544321110000 0013467899999999 9999999999999
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCccccccc
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFY 164 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q~y 164 (222)
|+++..+..+.+..+.. ..|.. |+.+++||||++||+++
T Consensus 167 ~~~~~~g~~~~~~~~~~--------------------------~~g~~----p~~~~~spdg~~l~v~~----------- 205 (347)
T 3hfq_A 167 YNVSDAGQLSEQSVLTM--------------------------EAGFG----PRHLVFSPDGQYAFLAG----------- 205 (347)
T ss_dssp EEECTTSCEEEEEEEEC--------------------------CTTCC----EEEEEECTTSSEEEEEE-----------
T ss_pred EEECCCCcEEEeeeEEc--------------------------CCCCC----CceEEECCCCCEEEEEe-----------
Confidence 99963222222222111 01333 99999999999999998
Q ss_pred cccccCCcEEEEEEeeCCCCCeee
Q 027522 165 PELKEKGSHMLQIDVNSEKGGMAI 188 (222)
Q Consensus 165 p~~~s~~~~i~~~dvd~~~G~l~~ 188 (222)
+.+..+..++++..+|.++.
T Consensus 206 ----~~~~~v~v~~~~~~~g~~~~ 225 (347)
T 3hfq_A 206 ----ELSSQIASLKYDTQTGAFTQ 225 (347)
T ss_dssp ----TTTTEEEEEEEETTTTEEEE
T ss_pred ----CCCCEEEEEEecCCCCceEE
Confidence 24556666777877887653
No 7
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.57 E-value=2.5e-13 Score=116.29 Aligned_cols=133 Identities=17% Similarity=0.223 Sum_probs=95.1
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCC-----C-eeEE---EEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDG-----S-WNHE---VAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFS 75 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g-----~-~~~~---q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvS 75 (222)
++|+|+|+++|+.+.-+.+|.+|..+..+ + +... ..+.+.+ + ..+..+.+||||++||++
T Consensus 160 ~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~-------~~~~~~~~spdg~~l~v~ 228 (361)
T 3scy_A 160 VRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAP----G-------SGPRHLIFNSDGKFAYLI 228 (361)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCT----T-------CCEEEEEECTTSSEEEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCC----C-------CCCeEEEEcCCCCEEEEE
Confidence 78999999999999889999999886443 3 5444 2333321 1 345789999999999999
Q ss_pred eCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCC
Q 027522 76 NWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSL 155 (222)
Q Consensus 76 nRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl 155 (222)
+...+.|.+|+++. +..+.+..+... | ..+. +|+.+++||||++|||+|
T Consensus 229 ~~~~~~v~v~~~~~-g~~~~~~~~~~~--------------------~----~~~~----~~~~i~~spdg~~l~v~~-- 277 (361)
T 3scy_A 229 NEIGGTVIAFRYAD-GMLDEIQTVAAD--------------------T----VNAQ----GSGDIHLSPDGKYLYASN-- 277 (361)
T ss_dssp ETTTCEEEEEEEET-TEEEEEEEEESC--------------------S----SCCC----CEEEEEECTTSSEEEEEE--
T ss_pred cCCCCeEEEEEecC-CceEEeEEEecC--------------------C----CCCC----CcccEEECCCCCEEEEEC--
Confidence 99999999999963 222223333221 0 0122 389999999999999999
Q ss_pred CCccccccccccccC-CcEEEEEEeeCCCCCeeeccce
Q 027522 156 FSAWDCQFYPELKEK-GSHMLQIDVNSEKGGMAINPNF 192 (222)
Q Consensus 156 ~~~wd~Q~yp~~~s~-~~~i~~~dvd~~~G~l~~~~~f 192 (222)
.. ...+..+++|+.+|.++....+
T Consensus 278 -------------~~~~~~i~v~~~~~~~g~~~~~~~~ 302 (361)
T 3scy_A 278 -------------RLKADGVAIFKVDETNGTLTKVGYQ 302 (361)
T ss_dssp -------------CSSSCEEEEEEECTTTCCEEEEEEE
T ss_pred -------------CCCCCEEEEEEEcCCCCcEEEeeEe
Confidence 23 5667777888889987644433
No 8
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.51 E-value=1.5e-12 Score=109.07 Aligned_cols=127 Identities=17% Similarity=0.215 Sum_probs=90.9
Q ss_pred eEEEcCCCCeEEEEeccCce-EEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcE
Q 027522 4 RFLHDPSKDIGFVGCALAST-MVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDI 82 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsst-V~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI 82 (222)
-++|+|+|+++|+.+.-+.+ |.+|..+.+|.+.... ....+. + ..+..+.+||||++||++++..+.|
T Consensus 132 ~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~-~~~~~~---~-------~~~~~~~~spdg~~l~v~~~~~~~v 200 (331)
T 3u4y_A 132 GIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG-QEFISG---G-------TRPFNITFTPDGNFAFVANLIGNSI 200 (331)
T ss_dssp EEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE-EEEECS---S-------SSEEEEEECTTSSEEEEEETTTTEE
T ss_pred ceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC-CccccC---C-------CCccceEECCCCCEEEEEeCCCCeE
Confidence 47899999999999988788 9999887666654333 222211 1 3468999999999999999999999
Q ss_pred EEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCccccc
Q 027522 83 RQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQ 162 (222)
Q Consensus 83 ~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q 162 (222)
.+|++......+.+..+.. +.. |+.+++||||++||+++ +
T Consensus 201 ~v~d~~~~~~~~~~~~~~~----------------------------~~~----~~~~~~spdg~~l~v~~--------~ 240 (331)
T 3u4y_A 201 GILETQNPENITLLNAVGT----------------------------NNL----PGTIVVSRDGSTVYVLT--------E 240 (331)
T ss_dssp EEEECSSTTSCEEEEEEEC----------------------------SSC----CCCEEECTTSSEEEEEC--------S
T ss_pred EEEECCCCcccceeeeccC----------------------------CCC----CceEEECCCCCEEEEEE--------c
Confidence 9999854211122444443 223 99999999999999999 3
Q ss_pred cccccccCCcEEEEEEeeCCCCCeeecc
Q 027522 163 FYPELKEKGSHMLQIDVNSEKGGMAINP 190 (222)
Q Consensus 163 ~yp~~~s~~~~i~~~dvd~~~G~l~~~~ 190 (222)
....|..+ |..+|.++.-.
T Consensus 241 -------~~~~i~~~--d~~~~~~~~~~ 259 (331)
T 3u4y_A 241 -------STVDVFNF--NQLSGTLSFVK 259 (331)
T ss_dssp -------SEEEEEEE--ETTTTEEEEEE
T ss_pred -------CCCEEEEE--ECCCCceeeec
Confidence 34455555 55788874333
No 9
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.47 E-value=4.7e-12 Score=110.13 Aligned_cols=120 Identities=14% Similarity=0.155 Sum_probs=80.2
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++|+|+|+++|+.+.-+.+|.+|..+.+|++.....+.++.. + ..+..|.+|||||+||+++...+.|.+
T Consensus 150 ~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~---g-------~~p~~~~~spdg~~l~v~~~~~~~v~v 219 (365)
T 1jof_A 150 MVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDP---G-------DHPRWVAMHPTGNYLYALMEAGNRICE 219 (365)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSST---T-------CCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred EEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCC---C-------CCCCEeEECCCCCEEEEEECCCCeEEE
Confidence 579999999999987788999998854577655444433210 1 346899999999999999998899999
Q ss_pred EEecCCCCCeEEE---EEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEE-ECCCCCEEEEEe
Q 027522 85 YNIEDPKNPVLTG---QIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQ-LSLDGKRLYVTN 153 (222)
Q Consensus 85 f~i~d~~~~~L~~---~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~-lspdGk~LyvaN 153 (222)
|+++ ..++++.. .+.+. +. +...+.. +...+.. |..++ +||||++||++|
T Consensus 220 ~~~~-~~~g~~~~~~~~~~~~---~~----------~~~g~~~-~~~~~~~----~~~i~~~spdG~~l~v~~ 273 (365)
T 1jof_A 220 YVID-PATHMPVYTHHSFPLI---PP----------GIPDRDP-ETGKGLY----RADVCALTFSGKYMFASS 273 (365)
T ss_dssp EEEC-TTTCCEEEEEEEEESS---CT----------TCCCBCT-TTSSBSE----EEEEEEECTTSSEEEEEE
T ss_pred EEEe-CCCCcEEEccceEEcC---CC----------CcCCccc-ccccccc----cccEEEECCCCCEEEEEC
Confidence 9994 34455532 22220 00 0000000 0000113 88999 999999999999
No 10
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.46 E-value=1.2e-12 Score=117.77 Aligned_cols=104 Identities=9% Similarity=-0.068 Sum_probs=73.1
Q ss_pred EEcCCCCeEEEEec-cCc---eEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeC----
Q 027522 6 LHDPSKDIGFVGCA-LAS---TMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW---- 77 (222)
Q Consensus 6 afhP~g~~aYvv~E-Lss---tV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnR---- 77 (222)
+..|+++++||.++ -.+ +|+++..+ +++ .... ++. | ..+ .|.+|||||+|||+|.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~-t~~--~~~~--i~~----g-------~~p-~i~~spDg~~lyv~n~~~~~ 89 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAG-SGS--ILGH--VNG----G-------FLP-NPVAAHSGSEFALASTSFSR 89 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECC-CCe--EEEE--ecC----C-------CCC-CeEECCCCCEEEEEeccccc
Confidence 34589999999997 333 77887663 333 3333 321 1 124 9999999999999984
Q ss_pred ---C--CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEE
Q 027522 78 ---L--HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVT 152 (222)
Q Consensus 78 ---g--h~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~Lyva 152 (222)
| .+.|.+|+.. ++++++++.++|.- ....|.. |++|++|||||+|||+
T Consensus 90 ~~rg~~~~~v~viD~~---t~~~~~~i~~~~~~--------------------~~~~g~~----p~~~~~spDG~~l~v~ 142 (373)
T 2mad_H 90 IAKGKRTDYVEVFDPV---TFLPIADIELPDAP--------------------RFDVGPY----SWMNANTPNNADLLFF 142 (373)
T ss_pred cccCCCCCeEEEEECC---CCcEEEEEECCCcc--------------------ccccCCC----ccceEECCCCCEEEEE
Confidence 3 5789999763 57788888875310 0001344 9999999999999999
Q ss_pred e
Q 027522 153 N 153 (222)
Q Consensus 153 N 153 (222)
|
T Consensus 143 n 143 (373)
T 2mad_H 143 Q 143 (373)
T ss_pred e
Confidence 9
No 11
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.43 E-value=1.5e-12 Score=120.29 Aligned_cols=104 Identities=15% Similarity=0.080 Sum_probs=77.3
Q ss_pred EEcCCCCeEEEEecc----CceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeC----
Q 027522 6 LHDPSKDIGFVGCAL----ASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW---- 77 (222)
Q Consensus 6 afhP~g~~aYvv~EL----sstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnR---- 77 (222)
+..|+++++||.++- +++|+++.-+ +++....|.+. ..+. |.+|||||+|||+|+
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~---t~~v~~~I~vG-------------~~P~-va~spDG~~lyVan~~~~r 101 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGE---AGRVIGMIDGG-------------FLPN-PVVADDGSFIAHASTVFSR 101 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETT---TTEEEEEEEEC-------------SSCE-EEECTTSSCEEEEEEEEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECC---CCeEEEEEECC-------------CCCc-EEECCCCCEEEEEcccccc
Confidence 567999999999996 7899999653 44555666542 1234 999999999999994
Q ss_pred ---C--CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEE
Q 027522 78 ---L--HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVT 152 (222)
Q Consensus 78 ---g--h~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~Lyva 152 (222)
| .+.|.+||. .+.+.+++|.+++-- + .--|.+ |++|++|||||+|||+
T Consensus 102 ~~~G~~~~~VsviD~---~t~~v~~~I~v~~g~-r-------------------~~~g~~----P~~~a~spDGk~lyVa 154 (386)
T 3sjl_D 102 IARGERTDYVEVFDP---VTLLPTADIELPDAP-R-------------------FLVGTY----PWMTSLTPDGKTLLFY 154 (386)
T ss_dssp TTEEEEEEEEEEECT---TTCCEEEEEEETTCC-C-------------------CCBSCC----GGGEEECTTSSEEEEE
T ss_pred cccCCCCCEEEEEEC---CCCeEEEEEECCCcc-c-------------------cccCCC----CceEEEcCCCCEEEEE
Confidence 3 467888854 568888998885300 0 001445 9999999999999999
Q ss_pred e
Q 027522 153 N 153 (222)
Q Consensus 153 N 153 (222)
|
T Consensus 155 n 155 (386)
T 3sjl_D 155 Q 155 (386)
T ss_dssp E
T ss_pred E
Confidence 9
No 12
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.43 E-value=4.1e-12 Score=119.29 Aligned_cols=129 Identities=9% Similarity=0.048 Sum_probs=92.9
Q ss_pred EEEcC----CCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCC
Q 027522 5 FLHDP----SKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHG 80 (222)
Q Consensus 5 ~afhP----~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~ 80 (222)
++||| +|+++||.|+++++|.++.. .+++..+++++....+.+.... ..+.++.|.+|||++++|||++..+
T Consensus 227 va~sp~~~~dg~~l~v~~~~~~~v~v~D~---~t~~~~~~i~~~g~~~~~~~~~-~~~~v~~i~~s~~~~~~~vs~~~~g 302 (543)
T 1nir_A 227 VESSKFKGYEDRYTIAGAYWPPQFAIMDG---ETLEPKQIVSTRGMTVDTQTYH-PEPRVAAIIASHEHPEFIVNVKETG 302 (543)
T ss_dssp EEECCSTTCTTTEEEEEEEESSEEEEEET---TTCCEEEEEECCEECSSSCCEE-SCCCEEEEEECSSSSEEEEEETTTT
T ss_pred EEeCCCcCCCCCEEEEEEccCCeEEEEec---cccccceeecccCcccCccccc-cCCceEEEEECCCCCEEEEEECCCC
Confidence 68999 99999999999999999964 2456677777643221110000 0135789999999999999999999
Q ss_pred cEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCccc
Q 027522 81 DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWD 160 (222)
Q Consensus 81 sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd 160 (222)
.|++|++.+....+ +..+.. |+. |+.+++||||++|||||
T Consensus 303 ~i~vvd~~~~~~l~-~~~i~~----------------------------~~~----~~~~~~spdg~~l~va~------- 342 (543)
T 1nir_A 303 KVLLVNYKDIDNLT-VTSIGA----------------------------APF----LHDGGWDSSHRYFMTAA------- 342 (543)
T ss_dssp EEEEEECTTSSSCE-EEEEEC----------------------------CSS----CCCEEECTTSCEEEEEE-------
T ss_pred eEEEEEecCCCcce-eEEecc----------------------------CcC----ccCceECCCCCEEEEEe-------
Confidence 99999996533333 223332 445 99999999999999999
Q ss_pred cccccccccCCcEEEEEEeeCCCCCee
Q 027522 161 CQFYPELKEKGSHMLQIDVNSEKGGMA 187 (222)
Q Consensus 161 ~Q~yp~~~s~~~~i~~~dvd~~~G~l~ 187 (222)
+ .+.+|..+ |..+|++.
T Consensus 343 -~-------~~~~v~v~--D~~tg~l~ 359 (543)
T 1nir_A 343 -N-------NSNKVAVI--DSKDRRLS 359 (543)
T ss_dssp -G-------GGTEEEEE--ETTTTEEE
T ss_pred -c-------CCCeEEEE--ECCCCeEE
Confidence 4 24445545 66788763
No 13
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.40 E-value=1.6e-12 Score=114.98 Aligned_cols=115 Identities=13% Similarity=0.122 Sum_probs=85.1
Q ss_pred EEEcCCCCeEEEEecc---------CceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEE
Q 027522 5 FLHDPSKDIGFVGCAL---------ASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFS 75 (222)
Q Consensus 5 ~afhP~g~~aYvv~EL---------sstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvS 75 (222)
++|||+|+++||.||+ +++|.+|.. .+++..+.+.+++..+.+. ..+..|.+|||||+|||+
T Consensus 55 i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~---~t~~~~~~i~~~~~~~~~g------~~p~~i~~spdg~~l~v~ 125 (361)
T 2oiz_A 55 VQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDA---DKLTFEKEISLPPKRVQGL------NYDGLFRQTTDGKFIVLQ 125 (361)
T ss_dssp EEECTTSSEEEEEEEEETTSSSSCEEEEEEEEET---TTCCEEEEEEECTTBCCBC------CCGGGEEECTTSSEEEEE
T ss_pred eEECCCCCEEEEEEecccccccCCCCCEEEEEEC---cCCcEEEEEEcCccccccC------CCcceEEECCCCCEEEEE
Confidence 6899999999999974 567888853 3567778888776544322 456899999999999999
Q ss_pred eCC-CCcEEEEEecCCCCCeEEEE-EEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 76 NWL-HGDIRQYNIEDPKNPVLTGQ-IWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 76 nRg-h~sI~vf~i~d~~~~~L~~~-v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
|++ .++|++|++. +.+++.. +.++|..+ |. ....|.++.+++++||+.+++++
T Consensus 126 n~~~~~~v~v~d~~---~~~~~~~~i~~~~~~~----v~------------------~~p~~~~~~~~~~~dg~~~~v~~ 180 (361)
T 2oiz_A 126 NASPATSIGIVDVA---KGDYVEDVTAAAGCWS----VI------------------PQPNRPRSFMTICGDGGLLTINL 180 (361)
T ss_dssp EESSSEEEEEEETT---TTEEEEEEGGGTTEEE----EE------------------ECTTSSSEEEEEETTSSEEEEEE
T ss_pred CCCCCCeEEEEECC---CCcEEEEEecCCCcce----eE------------------EcCCCCeeEEEECCCCcEEEEEE
Confidence 997 6899999884 3577777 66655311 00 00111267899999999999987
No 14
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.36 E-value=2.7e-11 Score=100.31 Aligned_cols=124 Identities=18% Similarity=0.201 Sum_probs=87.5
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCC-eeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGS-WNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~-~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
++|+|+|+++|+.+.-+++|.+|..+ +|. .+..+.+.. . ..+..|.+||||++||+++.+.+.|.
T Consensus 89 ~~~s~dg~~l~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~-------~------~~~~~~~~s~dg~~l~~~~~~~~~v~ 154 (343)
T 1ri6_A 89 ISTDHQGQFVFVGSYNAGNVSVTRLE-DGLPVGVVDVVEG-------L------DGCHSANISPDNRTLWVPALKQDRIC 154 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEE-TTEEEEEEEEECC-------C------TTBCCCEECTTSSEEEEEEGGGTEEE
T ss_pred EEEcCCCCEEEEEecCCCeEEEEECC-CCccccccccccC-------C------CCceEEEECCCCCEEEEecCCCCEEE
Confidence 67999999999999989999999775 442 222222211 1 23578999999999999998899999
Q ss_pred EEEecCCCCCeEEE--EEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCcccc
Q 027522 84 QYNIEDPKNPVLTG--QIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDC 161 (222)
Q Consensus 84 vf~i~d~~~~~L~~--~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~ 161 (222)
+|++...++...+. .+.. ..|.. |+.++++|||++||+++
T Consensus 155 ~~d~~~~~~~~~~~~~~~~~--------------------------~~~~~----~~~~~~~pdg~~l~~~~-------- 196 (343)
T 1ri6_A 155 LFTVSDDGHLVAQDPAEVTT--------------------------VEGAG----PRHMVFHPNEQYAYCVN-------- 196 (343)
T ss_dssp EEEECTTSCEEEEEEEEEEC--------------------------STTCC----EEEEEECTTSSEEEEEE--------
T ss_pred EEEecCCCceeeeccccccc--------------------------CCCCC----cceEEECCCCCEEEEEe--------
Confidence 99995423222211 1111 01333 99999999999999998
Q ss_pred ccccccccCCcEEEEEEeeCCCCCee
Q 027522 162 QFYPELKEKGSHMLQIDVNSEKGGMA 187 (222)
Q Consensus 162 Q~yp~~~s~~~~i~~~dvd~~~G~l~ 187 (222)
+ .+..+..+|++..+|.++
T Consensus 197 ~-------~~~~i~~~~~~~~~g~~~ 215 (343)
T 1ri6_A 197 E-------LNSSVDVWELKDPHGNIE 215 (343)
T ss_dssp T-------TTTEEEEEESSCTTSCCE
T ss_pred C-------CCCEEEEEEecCCCCcEE
Confidence 2 355677777776777664
No 15
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.34 E-value=1e-11 Score=115.59 Aligned_cols=119 Identities=12% Similarity=0.021 Sum_probs=85.7
Q ss_pred cCCCCeEEEEeccC----ceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeC------
Q 027522 8 DPSKDIGFVGCALA----STMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW------ 77 (222)
Q Consensus 8 hP~g~~aYvv~ELs----stV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnR------ 77 (222)
.|+++++||.|+-+ ++|.++.-+ +++....|.+. ..+ .|.+|||||+|||+|.
T Consensus 81 ~~~~~~vyV~n~~~~~~~~~VsVID~~---t~~vv~~I~vG-------------~~P-gia~SpDgk~lyVan~~~~~~~ 143 (426)
T 3c75_H 81 APDARRVYIQDPAHFAAITQQFVIDGS---TGRILGMTDGG-------------FLP-HPVAAEDGSFFAQASTVFERIA 143 (426)
T ss_dssp CCCTTEEEEEECTTTCSSEEEEEEETT---TTEEEEEEEEC-------------SSC-EEEECTTSSCEEEEEEEEEETT
T ss_pred CCCCCEEEEECCCcCCCCCeEEEEECC---CCEEEEEEECC-------------CCC-ceEECCCCCEEEEEeccccccc
Confidence 47889999999966 789999753 44556666553 234 8999999999999995
Q ss_pred ---CCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeC
Q 027522 78 ---LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNS 154 (222)
Q Consensus 78 ---gh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNs 154 (222)
..+.|.+|| ..+.+++++|.++|.-. ...|.. |++|++|||||+|||+|
T Consensus 144 ~G~~~~~VsviD---~~t~~vv~~I~v~g~~r--------------------~~~g~~----P~~~~~spDGk~lyV~n- 195 (426)
T 3c75_H 144 RGKRTDYVEVFD---PVTFLPIADIELPDAPR--------------------FLVGTY----QWMNALTPDNKNLLFYQ- 195 (426)
T ss_dssp EEEEEEEEEEEC---TTTCCEEEEEEETTCCC--------------------CCBSCC----GGGSEECTTSSEEEEEE-
T ss_pred cCCCCCEEEEEE---CCCCcEEEEEECCCccc--------------------cccCCC----cceEEEcCCCCEEEEEe-
Confidence 356788884 45688889998853100 001334 99999999999999999
Q ss_pred CCCccccccccccccCCcEEEEEEeeCCCCCe
Q 027522 155 LFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM 186 (222)
Q Consensus 155 l~~~wd~Q~yp~~~s~~~~i~~~dvd~~~G~l 186 (222)
. ..+.+|..+ |+.++++
T Consensus 196 -------~------~~~~~VsVI--D~~t~kv 212 (426)
T 3c75_H 196 -------F------SPAPAVGVV--DLEGKTF 212 (426)
T ss_dssp -------C------SSSCEEEEE--ETTTTEE
T ss_pred -------c------CCCCeEEEE--ECCCCeE
Confidence 2 134566666 4466654
No 16
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.34 E-value=9.6e-12 Score=109.90 Aligned_cols=100 Identities=12% Similarity=0.092 Sum_probs=71.7
Q ss_pred CCCCeEEEEecc-----CceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeC------
Q 027522 9 PSKDIGFVGCAL-----ASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW------ 77 (222)
Q Consensus 9 P~g~~aYvv~EL-----sstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnR------ 77 (222)
|+++++||.++- +++|.++.. ++++. ...+.. | ..+ .|.+|||||+|||+|.
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~-~t~~~--~~~i~~------g-------~~p-~i~~spdg~~lyv~~~~~~~~~ 75 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDY-TNGKF--LGMVPT------A-------FNG-HVQVSNDGKKIYTMTTYHERIT 75 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEET-TTCCE--EEEEEC------C-------EEE-EEEECTTSSEEEEEEEEETTSS
T ss_pred CCCCEEEEECCCCCccccCeEEEEEC-CCCeE--EEEecC------C-------CCC-ceEECCCCCEEEEEEecccccc
Confidence 578999999974 457888854 34543 333322 1 234 8999999999999984
Q ss_pred -C--CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 78 -L--HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 78 -g--h~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
| .+.|.+|++ .++++++++.+++. ....|.. |+.|++|||||+|||+|
T Consensus 76 ~g~~~~~v~v~d~---~t~~~~~~i~~~~~---------------------~~~~g~~----p~~i~~spdg~~l~v~n 126 (361)
T 2oiz_A 76 RGKRSDVVEVWDA---DKLTFEKEISLPPK---------------------RVQGLNY----DGLFRQTTDGKFIVLQN 126 (361)
T ss_dssp SSCEEEEEEEEET---TTCCEEEEEEECTT---------------------BCCBCCC----GGGEEECTTSSEEEEEE
T ss_pred cCCCCCEEEEEEC---cCCcEEEEEEcCcc---------------------ccccCCC----cceEEECCCCCEEEEEC
Confidence 3 456999976 35778888887421 0012455 99999999999999999
No 17
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.33 E-value=6.1e-11 Score=99.19 Aligned_cols=98 Identities=16% Similarity=0.223 Sum_probs=77.7
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++|+|+|+++|+.++-+++|.+|... +++ ..+.+.+. . +..+.+||||++||++++..+.|.+
T Consensus 236 ~~~s~dg~~l~~~~~~~~~v~~~d~~-~~~--~~~~~~~~------~--------~~~~~~s~dg~~l~v~~~~~~~v~~ 298 (353)
T 3vgz_A 236 ISLDTARQRAFITDSKAAEVLVVDTR-NGN--ILAKVAAP------E--------SLAVLFNPARNEAYVTHRQAGKVSV 298 (353)
T ss_dssp EEEETTTTEEEEEESSSSEEEEEETT-TCC--EEEEEECS------S--------CCCEEEETTTTEEEEEETTTTEEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEECC-CCc--EEEEEEcC------C--------CceEEECCCCCEEEEEECCCCeEEE
Confidence 78999999999999999999999763 343 33444432 1 2468999999999999999999999
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeC
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNS 154 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNs 154 (222)
|++. +++++..+..+ .. |+.++++|||++|||+|.
T Consensus 299 ~d~~---~~~~~~~~~~~----------------------------~~----~~~~~~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 299 IDAK---SYKVVKTFDTP----------------------------TH----PNSLALSADGKTLYVSVK 333 (353)
T ss_dssp EETT---TTEEEEEEECC----------------------------SE----EEEEEECTTSCEEEEEEE
T ss_pred EECC---CCeEEEEEecC----------------------------CC----CCeEEEcCCCCEEEEEEc
Confidence 9874 36776666552 23 899999999999999994
No 18
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.33 E-value=2.8e-11 Score=101.26 Aligned_cols=123 Identities=13% Similarity=0.177 Sum_probs=83.5
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCe-eEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSW-NHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDI 82 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~-~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI 82 (222)
.++|+|+|+++|+.++.+++|.+|..+ +++. +..+.+.. + ..+..|.+||||++||+++++.+.|
T Consensus 180 ~~~~spdg~~l~v~~~~~~~v~v~d~~-~~~~~~~~~~~~~------~-------~~~~~~~~spdg~~l~v~~~~~~~i 245 (331)
T 3u4y_A 180 NITFTPDGNFAFVANLIGNSIGILETQ-NPENITLLNAVGT------N-------NLPGTIVVSRDGSTVYVLTESTVDV 245 (331)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEECS-STTSCEEEEEEEC------S-------SCCCCEEECTTSSEEEEECSSEEEE
T ss_pred ceEECCCCCEEEEEeCCCCeEEEEECC-CCcccceeeeccC------C-------CCCceEEECCCCCEEEEEEcCCCEE
Confidence 478999999999999999999999874 3444 21222221 1 3347899999999999999999999
Q ss_pred EEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCccccc
Q 027522 83 RQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQ 162 (222)
Q Consensus 83 ~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q 162 (222)
.+|++.. ++.+.+..+..+-. +.+.. ..+...+++||||++||+++
T Consensus 246 ~~~d~~~-~~~~~~~~~~~~~~-----------------------~~~~~-~~~~~~~~~spdg~~l~v~~--------- 291 (331)
T 3u4y_A 246 FNFNQLS-GTLSFVKSFGHGLL-----------------------IDPRP-LFGANQMALNKTETKLFISA--------- 291 (331)
T ss_dssp EEEETTT-TEEEEEEEEECCCC-----------------------CCCGG-GTTCCCEEECTTSSEEEEEE---------
T ss_pred EEEECCC-Cceeeecccccccc-----------------------cCCCC-cccccceEECCCCCEEEEec---------
Confidence 9998743 22222333332100 00111 11124589999999999999
Q ss_pred cccccccCCcEEEEEEee
Q 027522 163 FYPELKEKGSHMLQIDVN 180 (222)
Q Consensus 163 ~yp~~~s~~~~i~~~dvd 180 (222)
+++..+..+|++
T Consensus 292 ------~~~~~v~v~d~~ 303 (331)
T 3u4y_A 292 ------NISRELKVFTIS 303 (331)
T ss_dssp ------TTTTEEEEEETT
T ss_pred ------CCCCcEEEEEec
Confidence 356677778764
No 19
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.31 E-value=3.7e-11 Score=107.98 Aligned_cols=86 Identities=7% Similarity=-0.096 Sum_probs=64.1
Q ss_pred EEEcCCCCeEEEEecc---------CceEEEEEeCCCCCeeEEEEEEec-CcccccccCCCCCCceeEEEEcCCCCEEEE
Q 027522 5 FLHDPSKDIGFVGCAL---------ASTMVRFSKTQDGSWNHEVAISVK-SLKVQNWILPEMPGLITDFLISLDDRFLYF 74 (222)
Q Consensus 5 ~afhP~g~~aYvv~EL---------sstV~~~~~d~~g~~~~~q~is~~-p~~~~g~~~~~~~~~~adI~iSpDgrfLYv 74 (222)
++|+|+|+++||.|++ +++|.+|... +++..+.+.++ +..+... ..+..+.+|||||+|||
T Consensus 71 i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~---t~~~~~~i~~~~~~~~~~g------~~p~~~~~spDG~~l~v 141 (373)
T 2mad_H 71 PVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV---TFLPIADIELPDAPRFDVG------PYSWMNANTPNNADLLF 141 (373)
T ss_pred eEECCCCCEEEEEeccccccccCCCCCeEEEEECC---CCcEEEEEECCCccccccC------CCccceEECCCCCEEEE
Confidence 6899999999999975 5678888642 56667777765 3222211 34579999999999999
Q ss_pred EeCC-CCcEEEEEecCCCCCeEEEE-EEecc
Q 027522 75 SNWL-HGDIRQYNIEDPKNPVLTGQ-IWVGG 103 (222)
Q Consensus 75 SnRg-h~sI~vf~i~d~~~~~L~~~-v~~gG 103 (222)
+|+. .++|.++| . +++++.+ +.++|
T Consensus 142 ~n~~~~~~v~viD-~---t~~~~~~~i~~~~ 168 (373)
T 2mad_H 142 FQFAAGPAVGLVV-Q---GGSSDDQLLSSPT 168 (373)
T ss_pred EecCCCCeEEEEE-C---CCCEEeEEcCCCc
Confidence 9986 68899986 4 4677777 77644
No 20
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.27 E-value=5.9e-11 Score=113.35 Aligned_cols=133 Identities=11% Similarity=0.220 Sum_probs=91.9
Q ss_pred EcCCCCeEEEEeccC-ceEEEEEeCCCC----CeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCC--
Q 027522 7 HDPSKDIGFVGCALA-STMVRFSKTQDG----SWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH-- 79 (222)
Q Consensus 7 fhP~g~~aYvv~ELs-stV~~~~~d~~g----~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh-- 79 (222)
+||++..+|+.++|+ ++|+++..+..+ .|+..+++.+.. ..+..|.+|||+|+|||+|+++
T Consensus 396 ~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g------------~g~~~i~~~p~~~~l~v~~~~~~~ 463 (567)
T 1qks_A 396 VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALG------------GGSLFIKTHPNSQYLYVDATLNPE 463 (567)
T ss_dssp EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC------------SCCCCEECCTTCSEEEEECTTCSS
T ss_pred ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCC------------CCCEEEEeCCCCCeEEEecCCCCC
Confidence 799999999999997 789999875322 288888887642 1236789999999999999964
Q ss_pred ----CcEEEEEecCCC-CC--eEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEE
Q 027522 80 ----GDIRQYNIEDPK-NP--VLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVT 152 (222)
Q Consensus 80 ----~sI~vf~i~d~~-~~--~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~Lyva 152 (222)
++|++|++.... .+ +....+.++.. . ..|+ +|++ |++|.++|||++||++
T Consensus 464 ~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~-~--------------~~~~----~~~~----~~~~~~~~~G~~~~~s 520 (567)
T 1qks_A 464 AEISGSVAVFDIKAMTGDGSDPEFKTLPIAEW-A--------------GITE----GQPR----VVQGEFNKDGTEVWFS 520 (567)
T ss_dssp HHHHTCEEEEEGGGCCCSSSCCCEEEECHHHH-H--------------TCCS----SCCE----EEEEEECTTSSEEEEE
T ss_pred cccCceEEEEECCcccccccCCCcEEeccccc-c--------------ccCC----CCcc----eEeeeECCCCCEEEEE
Confidence 599999996430 11 11223333100 0 0010 3677 9999999999999999
Q ss_pred eCCCCccccccccccccCCcEEEEEEeeCCCCCee
Q 027522 153 NSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 187 (222)
Q Consensus 153 Nsl~~~wd~Q~yp~~~s~~~~i~~~dvd~~~G~l~ 187 (222)
| |... ++...|+.+ |..|+++.
T Consensus 521 ~-----~~~~------~~~~~i~v~--D~~t~~~~ 542 (567)
T 1qks_A 521 V-----WNGK------DQESALVVV--DDKTLELK 542 (567)
T ss_dssp E-----ECCT------TSCCEEEEE--ETTTTEEE
T ss_pred e-----ecCC------CCCCcEEEE--ECCCceEE
Confidence 7 5332 234555555 77898874
No 21
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.27 E-value=2.1e-10 Score=95.90 Aligned_cols=117 Identities=8% Similarity=0.093 Sum_probs=85.6
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++|+|+|+++|+.++ +++|.++... ++ +..+.+....... ...+..|.+||||++||+++...+.|.+
T Consensus 190 ~~~s~dg~~l~~~~~-~~~i~~~d~~-~~--~~~~~~~~~~~~~--------~~~~~~~~~s~dg~~l~~~~~~~~~v~~ 257 (353)
T 3vgz_A 190 LALDSEGKRLYTTNA-DGELITIDTA-DN--KILSRKKLLDDGK--------EHFFINISLDTARQRAFITDSKAAEVLV 257 (353)
T ss_dssp CEEETTTTEEEEECT-TSEEEEEETT-TT--EEEEEEECCCSSS--------CCCEEEEEEETTTTEEEEEESSSSEEEE
T ss_pred EEECCCCCEEEEEcC-CCeEEEEECC-CC--eEEEEEEcCCCCC--------CcccceEEECCCCCEEEEEeCCCCEEEE
Confidence 689999999999988 7889887653 33 3344444422111 1346789999999999999999999999
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCccccccc
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFY 164 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q~y 164 (222)
|++. +++++..+..+ .|..++++|||++|||+| +
T Consensus 258 ~d~~---~~~~~~~~~~~---------------------------------~~~~~~~s~dg~~l~v~~--------~-- 291 (353)
T 3vgz_A 258 VDTR---NGNILAKVAAP---------------------------------ESLAVLFNPARNEAYVTH--------R-- 291 (353)
T ss_dssp EETT---TCCEEEEEECS---------------------------------SCCCEEEETTTTEEEEEE--------T--
T ss_pred EECC---CCcEEEEEEcC---------------------------------CCceEEECCCCCEEEEEE--------C--
Confidence 9874 35565555541 167899999999999999 3
Q ss_pred cccccCCcEEEEEEeeCCCCCe
Q 027522 165 PELKEKGSHMLQIDVNSEKGGM 186 (222)
Q Consensus 165 p~~~s~~~~i~~~dvd~~~G~l 186 (222)
.+..+..+| ..+|++
T Consensus 292 -----~~~~v~~~d--~~~~~~ 306 (353)
T 3vgz_A 292 -----QAGKVSVID--AKSYKV 306 (353)
T ss_dssp -----TTTEEEEEE--TTTTEE
T ss_pred -----CCCeEEEEE--CCCCeE
Confidence 456777774 467765
No 22
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.27 E-value=2.9e-11 Score=110.16 Aligned_cols=101 Identities=7% Similarity=-0.177 Sum_probs=74.4
Q ss_pred CCCeEEEEeccCc----eEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeC--------
Q 027522 10 SKDIGFVGCALAS----TMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW-------- 77 (222)
Q Consensus 10 ~g~~aYvv~ELss----tV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnR-------- 77 (222)
..+++||.||-++ +|+++.-+ +++.+.++.+. ..+ .|.+|||||+|||+|.
T Consensus 30 ~~~~~yV~~~~~~~~~d~vsvID~~---t~~v~~~i~vG-------------~~P-~i~~spDg~~lyVan~~~~r~~~G 92 (368)
T 1mda_H 30 ISRRSHITLPAYFAGTTENWVSCAG---CGVTLGHSLGA-------------FLS-LAVAGHSGSDFALASTSFARSAKG 92 (368)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETT---TTEEEEEEEEC-------------TTC-EEEECTTSSCEEEEEEEETTTTSS
T ss_pred CCCeEEEECCccCCccceEEEEECC---CCeEEEEEeCC-------------CCC-ceEECCCCCEEEEEcccccccccC
Confidence 5688999999777 77788642 45656666543 124 7999999999999993
Q ss_pred -CCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeC
Q 027522 78 -LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNS 154 (222)
Q Consensus 78 -gh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNs 154 (222)
..+.|.+|| +.+.+.+++|.++|.- .+ .-|.. |+++++|||||||||+|.
T Consensus 93 ~~~~~VsviD---~~T~~vv~~I~v~~~~---------------~~-----~~g~~----P~~ia~SpDGk~lyVan~ 143 (368)
T 1mda_H 93 KRTDYVEVFD---PVTFLPIADIELPDAP---------------RF-----SVGPR----VHIIGNCASSACLLFFLF 143 (368)
T ss_dssp SEEEEEEEEC---TTTCCEEEEEEETTSC---------------SC-----CBSCC----TTSEEECTTSSCEEEEEC
T ss_pred CCCCEEEEEE---CCCCCEEEEEECCCcc---------------cc-----ccCCC----cceEEEcCCCCEEEEEcc
Confidence 357788885 4568889999886310 00 01344 999999999999999993
No 23
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.24 E-value=9.8e-11 Score=109.91 Aligned_cols=98 Identities=13% Similarity=0.080 Sum_probs=76.3
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++|+|++ .+||.++.+++|.++.-+ .+ +..+++.+. . . +..+.+|||||+||++|+. +.|.+
T Consensus 143 ~~~~p~~-~~~vs~~~d~~V~v~D~~-t~--~~~~~i~~g------~------~-~~~v~~spdg~~l~v~~~d-~~V~v 204 (543)
T 1nir_A 143 NDLDLPN-LFSVTLRDAGQIALVDGD-SK--KIVKVIDTG------Y------A-VHISRMSASGRYLLVIGRD-ARIDM 204 (543)
T ss_dssp SCCCGGG-EEEEEEGGGTEEEEEETT-TC--CEEEEEECS------T------T-EEEEEECTTSCEEEEEETT-SEEEE
T ss_pred cccCCCC-EEEEEEcCCCeEEEEECC-Cc--eEEEEEecC------c------c-cceEEECCCCCEEEEECCC-CeEEE
Confidence 3578876 789999999999999653 34 334555432 1 1 4688999999999999998 99999
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECC----CCCEEEEEe
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSL----DGKRLYVTN 153 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lsp----dGk~LyvaN 153 (222)
|++. ..+++++.++.. |.. ||.+++|| ||++|||+|
T Consensus 205 ~D~~-~~t~~~~~~i~~----------------------------g~~----p~~va~sp~~~~dg~~l~v~~ 244 (543)
T 1nir_A 205 IDLW-AKEPTKVAEIKI----------------------------GIE----ARSVESSKFKGYEDRYTIAGA 244 (543)
T ss_dssp EETT-SSSCEEEEEEEC----------------------------CSE----EEEEEECCSTTCTTTEEEEEE
T ss_pred EECc-CCCCcEEEEEec----------------------------CCC----cceEEeCCCcCCCCCEEEEEE
Confidence 9983 345777777665 334 99999999 999999999
No 24
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.22 E-value=6.6e-11 Score=109.30 Aligned_cols=114 Identities=9% Similarity=-0.032 Sum_probs=82.5
Q ss_pred eEEEcCCCCeEEEEec---------cCceEEEEEeCCCCCeeEEEEEEecCcc-cccccCCCCCCceeEEEEcCCCCEEE
Q 027522 4 RFLHDPSKDIGFVGCA---------LASTMVRFSKTQDGSWNHEVAISVKSLK-VQNWILPEMPGLITDFLISLDDRFLY 73 (222)
Q Consensus 4 r~afhP~g~~aYvv~E---------LsstV~~~~~d~~g~~~~~q~is~~p~~-~~g~~~~~~~~~~adI~iSpDgrfLY 73 (222)
.++++|+|+++||.|. -+++|.++.- .+++....|.+++.+ ... ...+..+.+|||||+||
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~---~t~~v~~~I~v~~g~r~~~------g~~P~~~a~spDGk~ly 152 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDP---VTLLPTADIELPDAPRFLV------GTYPWMTSLTPDGKTLL 152 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT---TTCCEEEEEEETTCCCCCB------SCCGGGEEECTTSSEEE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEEC---CCCeEEEEEECCCcccccc------CCCCceEEEcCCCCEEE
Confidence 3789999999999995 4677888854 246677778776411 110 13468899999999999
Q ss_pred EEeCC-CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEE
Q 027522 74 FSNWL-HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVT 152 (222)
Q Consensus 74 vSnRg-h~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~Lyva 152 (222)
|+|+. .++|+++|+. +.+++.+|.+.|.. |-...|.-+.+++++||+++||+
T Consensus 153 Van~~~~~~VsVID~~---t~~vv~tI~v~g~~------------------------~~~P~g~~~~~~~~~DG~~~~v~ 205 (386)
T 3sjl_D 153 FYQFSPAPAVGVVDLE---GKAFKRMLDVPDCY------------------------HIFPTAPDTFFMHCRDGSLAKVA 205 (386)
T ss_dssp EEECSSSCEEEEEETT---TTEEEEEEECCSEE------------------------EEEEEETTEEEEEETTSCEEEEE
T ss_pred EEEcCCCCeEEEEECC---CCcEEEEEECCCcc------------------------eeecCCCceeEEECCCCCEEEEE
Confidence 99985 7899999773 58899999886531 11111223566888999999888
Q ss_pred e
Q 027522 153 N 153 (222)
Q Consensus 153 N 153 (222)
+
T Consensus 206 ~ 206 (386)
T 3sjl_D 206 F 206 (386)
T ss_dssp C
T ss_pred C
Confidence 7
No 25
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.22 E-value=3.1e-10 Score=107.69 Aligned_cols=146 Identities=11% Similarity=0.045 Sum_probs=94.2
Q ss_pred EEEcCCCCeEEEEe------------------ccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEE-
Q 027522 5 FLHDPSKDIGFVGC------------------ALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLI- 65 (222)
Q Consensus 5 ~afhP~g~~aYvv~------------------ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~i- 65 (222)
|.|+|+++.+|+.+ +-+.+|.+|..+. + +..+++.+... | ..+.+|++
T Consensus 193 ~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~-~--k~~~tI~vg~~---g-------~~P~~i~f~ 259 (462)
T 2ece_A 193 FWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK-R--KRIHSLTLGEE---N-------RMALELRPL 259 (462)
T ss_dssp EEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT-T--EEEEEEESCTT---E-------EEEEEEEEC
T ss_pred EEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCC-C--cEeeEEecCCC---C-------CccceeEee
Confidence 66799999888887 5689999998853 3 66677776421 1 34578888
Q ss_pred -cCCCCEEEEEeC-----CCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCc-cccCcccCCCCe
Q 027522 66 -SLDDRFLYFSNW-----LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVP-EVQGHRLRGGPQ 138 (222)
Q Consensus 66 -SpDgrfLYvSnR-----gh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~-~v~G~~~~ggPr 138 (222)
||||+++||.|- ..++|.+|..++ +..+....|.+. . .++.+ ..|+.+ ..+| +.+.|.
T Consensus 260 ~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~~~~vIdi~----~---~~v~~-----~lp~~~~~f~~--~~~~pa 324 (462)
T 2ece_A 260 HDPTKLMGFINMVVSLKDLSSSIWLWFYED-GKWNAEKVIEIP----A---EPLEG-----NLPEILKPFKA--VPPLVT 324 (462)
T ss_dssp SSTTCCEEEEEEEEETTTCCEEEEEEEEET-TEEEEEEEEEEC----C---EECCS-----SCCGGGGGGTE--ECCCCC
T ss_pred ECCCCCEEEEEEeeeccCCCceEEEEEecC-CceeEEEEEeCC----C---ccccc-----ccccccccccc--CCCcee
Confidence 999999999999 999999999854 322222222220 0 00000 111100 0000 012499
Q ss_pred eEEECCCCCEEEEEeCCCCccccccccccccCCcEEEEEEeeCCCCCeeeccceeE
Q 027522 139 MIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFV 194 (222)
Q Consensus 139 ~~~lspdGk~LyvaNsl~~~wd~Q~yp~~~s~~~~i~~~dvd~~~G~l~~~~~f~v 194 (222)
.+.||||||+|||+| . ..+.|..+|++ +.+.+++.....+
T Consensus 325 ~I~lS~DGrfLYVSn--------r-------g~d~VavfdV~-d~~~~~lv~~I~t 364 (462)
T 2ece_A 325 DIDISLDDKFLYLSL--------W-------GIGEVRQYDIS-NPFKPVLTGKVKL 364 (462)
T ss_dssp CEEECTTSCEEEEEE--------T-------TTTEEEEEECS-STTSCEEEEEEEC
T ss_pred EEEECCCCCEEEEEe--------C-------CCCEEEEEEec-CCCCcEEEEEEEe
Confidence 999999999999999 3 35677778875 4455665554433
No 26
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.19 E-value=6.3e-11 Score=115.35 Aligned_cols=145 Identities=17% Similarity=0.094 Sum_probs=94.4
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCC-----CCCeeEEEEE-EecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCC
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQ-----DGSWNHEVAI-SVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWL 78 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~-----~g~~~~~q~i-s~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRg 78 (222)
+.++|||+++||.++++++|+++..+. +|++.....+ ..+ +....+-.+.++||| ++|++|..
T Consensus 282 v~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v----------~vG~gP~h~aF~~dG-~aY~t~~l 350 (595)
T 1fwx_A 282 CNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP----------ELGLGPLHTAFDGRG-NAYTSLFL 350 (595)
T ss_dssp EEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC----------BCCSCEEEEEECTTS-EEEEEETT
T ss_pred EEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc----------CCCCCcceEEECCCC-eEEEEEec
Confidence 579999999999999999999998752 2333222111 111 122557999999999 99999999
Q ss_pred CCcEEEEEecCC-------CCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEE
Q 027522 79 HGDIRQYNIEDP-------KNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYV 151 (222)
Q Consensus 79 h~sI~vf~i~d~-------~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~Lyv 151 (222)
.++|++|+++.. ...+.+.++.++ .||-. ... .--.+++|||||||+
T Consensus 351 dsqV~kwdi~~a~~~~~g~~~~~vi~kidV~------------------yqpGh----~~~----~~g~t~~~DGk~l~~ 404 (595)
T 1fwx_A 351 DSQVVKWNIEDAIRAYAGEKVDPIKDKLDVH------------------YQPGH----LKT----VMGETLDATNDWLVC 404 (595)
T ss_dssp TTEEEEEEHHHHHHHHHTCSCCCEEEEEECS------------------SCEEE----EEE----TTTTSTTCCSSEEEE
T ss_pred CCcEEEEEhhHhhhhhcccccceeEEEeecc------------------ccccc----cee----ccceEeCCCCCEEEE
Confidence 999999999541 124567777774 11100 000 223467999999999
Q ss_pred EeCCCCccccccc-ccccc--CCcEEEEEEeeCCCCCeeeccceeE
Q 027522 152 TNSLFSAWDCQFY-PELKE--KGSHMLQIDVNSEKGGMAINPNFFV 194 (222)
Q Consensus 152 aNsl~~~wd~Q~y-p~~~s--~~~~i~~~dvd~~~G~l~~~~~f~v 194 (222)
+| ++.|..| |-+-. +|.++ ||| .+|+|++-.+..+
T Consensus 405 ~N----k~skdr~~~~gp~~~~~~ql--~di--s~~~m~lv~d~p~ 442 (595)
T 1fwx_A 405 LS----KFSKDRFLNVGPLKPENDQL--IDI--SGDKMVLVHDGPT 442 (595)
T ss_dssp EE----SCCTTSSCCCCSSCCEEEEE--EEC--SSSSCEEEEEEEE
T ss_pred cC----CCCccccccCCCCCCCcceE--EEc--CCCcEEEEEEEcC
Confidence 99 2221111 11101 12244 566 6789998888877
No 27
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.18 E-value=5e-10 Score=106.90 Aligned_cols=130 Identities=11% Similarity=0.040 Sum_probs=94.2
Q ss_pred eEEEc----CCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCC
Q 027522 4 RFLHD----PSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH 79 (222)
Q Consensus 4 r~afh----P~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh 79 (222)
-++|+ |+|+++||.||++++|.++. ..+++..+++++....+.+....+ ....+.|..|+++..+|+++...
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD---~~t~~~~~~i~~~~~~~~~~~~~p-~~rva~i~~s~~~~~~vv~~~~~ 319 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYWPPQYVIMD---GETLEPKKIQSTRGMTYDEQEYHP-EPRVAAILASHYRPEFIVNVKET 319 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEETTEEEEEE---TTTCCEEEEEECCEECTTTCCEES-CCCEEEEEECSSSSEEEEEETTT
T ss_pred eeEEccccCCCCCEEEEEEccCCeEEEEE---CCCCcEEEEEeccccccccccccC-CCceEEEEEcCCCCEEEEEecCC
Confidence 36889 79999999999999999995 246788888887643332210000 02568899999999999999999
Q ss_pred CcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCcc
Q 027522 80 GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAW 159 (222)
Q Consensus 80 ~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~w 159 (222)
+.|++++..+....+ +..+.. |+. |+++.+|||||+|||||
T Consensus 320 g~v~~vd~~~~~~~~-v~~i~~----------------------------~~~----~~d~~~~pdgr~~~va~------ 360 (567)
T 1qks_A 320 GKILLVDYTDLNNLK-TTEISA----------------------------ERF----LHDGGLDGSHRYFITAA------ 360 (567)
T ss_dssp TEEEEEETTCSSEEE-EEEEEC----------------------------CSS----EEEEEECTTSCEEEEEE------
T ss_pred CeEEEEecCCCccce-eeeeec----------------------------ccc----ccCceECCCCCEEEEEe------
Confidence 999999886533222 222222 455 99999999999999999
Q ss_pred ccccccccccCCcEEEEEEeeCCCCCee
Q 027522 160 DCQFYPELKEKGSHMLQIDVNSEKGGMA 187 (222)
Q Consensus 160 d~Q~yp~~~s~~~~i~~~dvd~~~G~l~ 187 (222)
+. +..|..+ |+.+|++.
T Consensus 361 --~~-------sn~V~Vi--D~~t~kl~ 377 (567)
T 1qks_A 361 --NA-------RNKLVVI--DTKEGKLV 377 (567)
T ss_dssp --GG-------GTEEEEE--ETTTTEEE
T ss_pred --CC-------CCeEEEE--ECCCCcEE
Confidence 53 4445555 66788763
No 28
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.13 E-value=2.9e-09 Score=90.38 Aligned_cols=106 Identities=12% Similarity=0.109 Sum_probs=83.0
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeC-CCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKT-QDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d-~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
++|+|+++.+|+.+..+.+|++|.++ ++|.+...+++...+.. . ..+..|.+++|| .|||++++.+.|.
T Consensus 154 i~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~---~------~~p~g~~~d~~G-~lwva~~~~~~v~ 223 (297)
T 3g4e_A 154 LDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKE---E------QIPDGMCIDAEG-KLWVACYNGGRVI 223 (297)
T ss_dssp EEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGG---G------CEEEEEEEBTTS-CEEEEEETTTEEE
T ss_pred eEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCC---C------CCCCeeEECCCC-CEEEEEcCCCEEE
Confidence 68999999999999999999999986 67877655554332211 1 456889999999 5999999888888
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEEC-CCCCEEEEEeC
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLS-LDGKRLYVTNS 154 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~ls-pdGk~LyvaNs 154 (222)
+| ++.+++++..+.+. ... |..++++ ||+++||||++
T Consensus 224 ~~---d~~tG~~~~~i~~p---------------------------~~~----~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 224 RL---DPVTGKRLQTVKLP---------------------------VDK----TTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EE---CTTTCCEEEEEECS---------------------------SSB----EEEEEEESGGGCEEEEEEB
T ss_pred EE---cCCCceEEEEEECC---------------------------CCC----ceEEEEeCCCCCEEEEEcC
Confidence 88 44557787777652 123 8899998 99999999995
No 29
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.08 E-value=6e-10 Score=103.76 Aligned_cols=87 Identities=8% Similarity=-0.013 Sum_probs=66.6
Q ss_pred EEEcCCCCeEEEEec---------cCceEEEEEeCCCCCeeEEEEEEec-CcccccccCCCCCCceeEEEEcCCCCEEEE
Q 027522 5 FLHDPSKDIGFVGCA---------LASTMVRFSKTQDGSWNHEVAISVK-SLKVQNWILPEMPGLITDFLISLDDRFLYF 74 (222)
Q Consensus 5 ~afhP~g~~aYvv~E---------LsstV~~~~~d~~g~~~~~q~is~~-p~~~~g~~~~~~~~~~adI~iSpDgrfLYv 74 (222)
++++|+|+++||.|. -+++|+++.- .+++..+.|.++ +..+... ..+..+.+|||||+|||
T Consensus 123 ia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~---~t~~vv~~I~v~g~~r~~~g------~~P~~~~~spDGk~lyV 193 (426)
T 3c75_H 123 PVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP---VTFLPIADIELPDAPRFLVG------TYQWMNALTPDNKNLLF 193 (426)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT---TTCCEEEEEEETTCCCCCBS------CCGGGSEECTTSSEEEE
T ss_pred eEECCCCCEEEEEeccccccccCCCCCEEEEEEC---CCCcEEEEEECCCccccccC------CCcceEEEcCCCCEEEE
Confidence 689999999999995 4678998843 245667778775 3222111 34578999999999999
Q ss_pred EeCC-CCcEEEEEecCCCCCeEEEEEEecc
Q 027522 75 SNWL-HGDIRQYNIEDPKNPVLTGQIWVGG 103 (222)
Q Consensus 75 SnRg-h~sI~vf~i~d~~~~~L~~~v~~gG 103 (222)
+|+. .++|.++|+. +.+++.+|.++|
T Consensus 194 ~n~~~~~~VsVID~~---t~kvv~~I~v~g 220 (426)
T 3c75_H 194 YQFSPAPAVGVVDLE---GKTFDRMLDVPD 220 (426)
T ss_dssp EECSSSCEEEEEETT---TTEEEEEEECCS
T ss_pred EecCCCCeEEEEECC---CCeEEEEEEcCC
Confidence 9996 7899999763 578899999865
No 30
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.07 E-value=1.5e-10 Score=112.69 Aligned_cols=102 Identities=11% Similarity=0.027 Sum_probs=77.1
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCC-------CCeeEEEEEEecCcccc-cccCCCCCCceeEEEEcCCCCEEEEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQD-------GSWNHEVAISVKSLKVQ-NWILPEMPGLITDFLISLDDRFLYFS 75 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~-------g~~~~~q~is~~p~~~~-g~~~~~~~~~~adI~iSpDgrfLYvS 75 (222)
-++|+|+| +||+.+||+|+|.+|.+++. ..+...+.+.+ .+. |.. ..+..+.+||||||||++
T Consensus 335 h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV---~yqpGh~-----~~~~g~t~~~DGk~l~~~ 405 (595)
T 1fwx_A 335 HTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDV---HYQPGHL-----KTVMGETLDATNDWLVCL 405 (595)
T ss_dssp EEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEEC---SSCEEEE-----EETTTTSTTCCSSEEEEE
T ss_pred eEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeec---ccccccc-----eeccceEeCCCCCEEEEc
Confidence 36899999 99999999999999988531 12344444443 333 210 223678899999999999
Q ss_pred eCCC-CcE-----------EEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEEC
Q 027522 76 NWLH-GDI-----------RQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLS 143 (222)
Q Consensus 76 nRgh-~sI-----------~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~ls 143 (222)
|+++ |.+ .+|+|+ .++.+|+...+++ .. ||++++.
T Consensus 406 Nk~skdr~~~~gp~~~~~~ql~dis-~~~m~lv~d~p~~----------------------------~e----Ph~~~i~ 452 (595)
T 1fwx_A 406 SKFSKDRFLNVGPLKPENDQLIDIS-GDKMVLVHDGPTF----------------------------AE----PHDAIAV 452 (595)
T ss_dssp ESCCTTSSCCCCSSCCEEEEEEECS-SSSCEEEEEEEES----------------------------SC----CCCEEEE
T ss_pred CCCCccccccCCCCCCCcceEEEcC-CCcEEEEEEEcCC----------------------------CC----CCceEEc
Confidence 9998 888 999995 4678898888873 23 9999999
Q ss_pred CCCC
Q 027522 144 LDGK 147 (222)
Q Consensus 144 pdGk 147 (222)
|..+
T Consensus 453 ~~~~ 456 (595)
T 1fwx_A 453 HPSI 456 (595)
T ss_dssp CTTT
T ss_pred cHHH
Confidence 9886
No 31
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.01 E-value=3.3e-09 Score=97.09 Aligned_cols=146 Identities=13% Similarity=0.101 Sum_probs=94.5
Q ss_pred EEEcCCCCeEEEEecc----CceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCC
Q 027522 5 FLHDPSKDIGFVGCAL----ASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHG 80 (222)
Q Consensus 5 ~afhP~g~~aYvv~EL----sstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~ 80 (222)
++|+|+|+++||.+-- ...|.++.. +|.+...+.+.. + ..+..|.++|++.+||++.++.+
T Consensus 184 ia~d~~G~~lyvad~~~~~~~~~v~~~~~--~g~~~~~~~l~~----~---------~~p~giavdp~~g~lyv~d~~~~ 248 (430)
T 3tc9_A 184 ICWTHEADSMIITNDQNNNDRPNNYILTR--ESGFKVITELTK----G---------QNCNGAETHPINGELYFNSWNAG 248 (430)
T ss_dssp EEECTTSSEEEEEECCSCTTSEEEEEEEG--GGTSCSEEEEEE----C---------SSCCCEEECTTTCCEEEEETTTT
T ss_pred EEEeCCCCEEEEEeCCCCcccceEEEEeC--CCceeeeeeecc----C---------CCceEEEEeCCCCEEEEEECCCC
Confidence 6899999999999863 334555543 455543332221 1 34578999998888999999999
Q ss_pred cEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCccc
Q 027522 81 DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWD 160 (222)
Q Consensus 81 sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd 160 (222)
.|.+|+.+. ..+......+ .+. +|+.++++|+|++|||++
T Consensus 249 ~V~~~~~~~---~~~~~~~~~~--------------------------~~~----~P~gia~~pdG~~lyv~d------- 288 (430)
T 3tc9_A 249 QVFRYDFTT---QETTPLFTIQ--------------------------DSG----WEFHIQFHPSGNYAYIVV------- 288 (430)
T ss_dssp EEEEEETTT---TEEEEEEECS--------------------------SSS----CCEEEEECTTSSEEEEEE-------
T ss_pred EEEEEECCC---CcEEEEEEcC--------------------------CCC----cceeEEEcCCCCEEEEEE-------
Confidence 999887632 3331111111 122 499999999999999999
Q ss_pred cccccccccCCcEEEEEEeeCCCCCeeeccceeEecCC--CCCCCcceeeeecCC
Q 027522 161 CQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEA--EPDGPALAHEMRYPG 213 (222)
Q Consensus 161 ~Q~yp~~~s~~~~i~~~dvd~~~G~l~~~~~f~vdf~~--~~~g~~~~h~~r~~~ 213 (222)
+.+..|.+++.|..+|.+..-..+.=.++. -.+|+...-++..|.
T Consensus 289 --------~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~ 335 (430)
T 3tc9_A 289 --------VNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPR 335 (430)
T ss_dssp --------TTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEE
T ss_pred --------CCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCc
Confidence 468899999998877766322122112221 225555555666666
No 32
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.01 E-value=5e-09 Score=90.74 Aligned_cols=95 Identities=12% Similarity=0.148 Sum_probs=68.7
Q ss_pred CCCeEEEEec-cCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCC---------
Q 027522 10 SKDIGFVGCA-LASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH--------- 79 (222)
Q Consensus 10 ~g~~aYvv~E-LsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh--------- 79 (222)
+++.+||.+. .+++|.++... ++ +..+.+.+. ..+..|.++|||| ||+++++.
T Consensus 139 ~~~~lyv~~~~~~~~v~viD~~-t~--~~~~~i~~g-------------~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~ 201 (328)
T 3dsm_A 139 YGKYVYVNCWSYQNRILKIDTE-TD--KVVDELTIG-------------IQPTSLVMDKYNK-MWTITDGGYEGSPYGYE 201 (328)
T ss_dssp ETTEEEEEECTTCCEEEEEETT-TT--EEEEEEECS-------------SCBCCCEECTTSE-EEEEBCCBCTTCSSCBC
T ss_pred ECCEEEEEcCCCCCEEEEEECC-CC--eEEEEEEcC-------------CCccceEEcCCCC-EEEEECCCccCCccccC
Confidence 5789999997 78999999763 34 334444432 2347899999999 77777765
Q ss_pred -CcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeC
Q 027522 80 -GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNS 154 (222)
Q Consensus 80 -~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNs 154 (222)
+.|.+|+. .+.+++..+.+. .|.. |+.|++||||++|||+|+
T Consensus 202 ~~~v~~id~---~t~~v~~~~~~~--------------------------~g~~----p~~la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 202 APSLYRIDA---ETFTVEKQFKFK--------------------------LGDW----PSEVQLNGTRDTLYWINN 244 (328)
T ss_dssp CCEEEEEET---TTTEEEEEEECC--------------------------TTCC----CEEEEECTTSCEEEEESS
T ss_pred CceEEEEEC---CCCeEEEEEecC--------------------------CCCC----ceeEEEecCCCEEEEEcc
Confidence 66777754 457776665541 1444 999999999999999993
No 33
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.01 E-value=2.4e-08 Score=85.25 Aligned_cols=99 Identities=20% Similarity=0.259 Sum_probs=75.7
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|+|+++++|+.+.-+++|.++... +++ ....+... ..+..+.+||||++||+++...+.|.
T Consensus 78 ~~~~spdg~~l~~~~~~~~~v~v~d~~-~~~--~~~~~~~~-------------~~~~~~~~s~dg~~l~~~~~~~~~v~ 141 (391)
T 1l0q_A 78 GVAVSPDGKQVYVTNMASSTLSVIDTT-SNT--VAGTVKTG-------------KSPLGLALSPDGKKLYVTNNGDKTVS 141 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETT-TTE--EEEEEECS-------------SSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred ceEECCCCCEEEEEECCCCEEEEEECC-CCe--EEEEEeCC-------------CCcceEEECCCCCEEEEEeCCCCEEE
Confidence 578999999999999988999999764 332 22222211 33588999999999999999999999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++.. ++++..+.. +.. |+.++++|||++||+++
T Consensus 142 ~~d~~~---~~~~~~~~~----------------------------~~~----~~~~~~~~dg~~l~~~~ 176 (391)
T 1l0q_A 142 VINTVT---KAVINTVSV----------------------------GRS----PKGIAVTPDGTKVYVAN 176 (391)
T ss_dssp EEETTT---TEEEEEEEC----------------------------CSS----EEEEEECTTSSEEEEEE
T ss_pred EEECCC---CcEEEEEec----------------------------CCC----cceEEECCCCCEEEEEe
Confidence 998743 555444433 233 88999999999999998
No 34
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.00 E-value=1.4e-08 Score=86.11 Aligned_cols=128 Identities=12% Similarity=0.056 Sum_probs=81.5
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCC-----
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH----- 79 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh----- 79 (222)
++++|+|+ .|+.. .+.|.++..+ +|+++.. ....+. ... +.+.+|.++|||| ||+++.+.
T Consensus 59 i~~~~dG~-l~v~~--~~~l~~~d~~-~g~~~~~--~~~~~~--~~~------~~~~di~~d~dG~-l~~~~~~~~~~~~ 123 (297)
T 3g4e_A 59 VALRQSGG-YVATI--GTKFCALNWK-EQSAVVL--ATVDND--KKN------NRFNDGKVDPAGR-YFAGTMAEETAPA 123 (297)
T ss_dssp EEEBTTSS-EEEEE--TTEEEEEETT-TTEEEEE--EECCTT--CSS------EEEEEEEECTTSC-EEEEEEECCSBTT
T ss_pred EEECCCCC-EEEEE--CCeEEEEECC-CCcEEEE--EecCCC--CCC------CCCCCEEECCCCC-EEEecCCcccccc
Confidence 68899999 45543 5788888763 4554322 222111 011 4578999999999 66666442
Q ss_pred ----CcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCC
Q 027522 80 ----GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSL 155 (222)
Q Consensus 80 ----~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl 155 (222)
....+|.++. . +++.. +..+ ... |+.+++||||++|||++
T Consensus 124 ~~~~~~~~l~~~d~-~-g~~~~-~~~~---------------------------~~~----pngi~~spdg~~lyv~~-- 167 (297)
T 3g4e_A 124 VLERHQGALYSLFP-D-HHVKK-YFDQ---------------------------VDI----SNGLDWSLDHKIFYYID-- 167 (297)
T ss_dssp BCCTTCEEEEEECT-T-SCEEE-EEEE---------------------------ESB----EEEEEECTTSCEEEEEE--
T ss_pred cccCCCcEEEEEEC-C-CCEEE-Eeec---------------------------ccc----ccceEEcCCCCEEEEec--
Confidence 4467888843 2 33321 1110 122 89999999999999999
Q ss_pred CCccccccccccccCCcEEEEEEeeCCCCCeeeccceeEecC
Q 027522 156 FSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFE 197 (222)
Q Consensus 156 ~~~wd~Q~yp~~~s~~~~i~~~dvd~~~G~l~~~~~f~vdf~ 197 (222)
+.+..|.++|+|+.+|.++ +.+.+.++.
T Consensus 168 -------------~~~~~i~~~~~d~~~G~~~-~~~~~~~~~ 195 (297)
T 3g4e_A 168 -------------SLSYSVDAFDYDLQTGQIS-NRRSVYKLE 195 (297)
T ss_dssp -------------GGGTEEEEEEECTTTCCEE-EEEEEEECC
T ss_pred -------------CCCCcEEEEeccCCCCccc-CcEEEEECC
Confidence 3467788888888888864 234445554
No 35
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.00 E-value=2.1e-08 Score=85.57 Aligned_cols=99 Identities=20% Similarity=0.300 Sum_probs=75.6
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
-++|+|+++++|+.+.-+++|.++... +++ ..+.+... ..+..+.+||||++||+++...+.|.
T Consensus 36 ~~~~s~dg~~l~~~~~~d~~i~v~d~~-~~~--~~~~~~~~-------------~~v~~~~~spdg~~l~~~~~~~~~v~ 99 (391)
T 1l0q_A 36 GAVISPDGTKVYVANAHSNDVSIIDTA-TNN--VIATVPAG-------------SSPQGVAVSPDGKQVYVTNMASSTLS 99 (391)
T ss_dssp EEEECTTSSEEEEEEGGGTEEEEEETT-TTE--EEEEEECS-------------SSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred eEEECCCCCEEEEECCCCCeEEEEECC-CCe--EEEEEECC-------------CCccceEECCCCCEEEEEECCCCEEE
Confidence 468999999999999889999998763 343 23333321 23589999999999999998889999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++.. ++.+..+.. +.. |..++++|||++||+++
T Consensus 100 v~d~~~---~~~~~~~~~----------------------------~~~----~~~~~~s~dg~~l~~~~ 134 (391)
T 1l0q_A 100 VIDTTS---NTVAGTVKT----------------------------GKS----PLGLALSPDGKKLYVTN 134 (391)
T ss_dssp EEETTT---TEEEEEEEC----------------------------SSS----EEEEEECTTSSEEEEEE
T ss_pred EEECCC---CeEEEEEeC----------------------------CCC----cceEEECCCCCEEEEEe
Confidence 998843 455433332 222 88999999999999987
No 36
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.98 E-value=5.4e-09 Score=86.22 Aligned_cols=114 Identities=14% Similarity=0.142 Sum_probs=80.5
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeC------
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW------ 77 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnR------ 77 (222)
.++|+|+|+++|+.+.-+.+|.++... +++ ....+........+ ..+..+.+||||++||+++.
T Consensus 38 ~~~~s~dg~~l~v~~~~~~~v~~~d~~-~~~--~~~~~~~~~~~~~~-------~~~~~~~~s~dg~~l~~~~~~~~~~~ 107 (337)
T 1pby_B 38 VPMVAPGGRIAYATVNKSESLVKIDLV-TGE--TLGRIDLSTPEERV-------KSLFGAALSPDGKTLAIYESPVRLEL 107 (337)
T ss_dssp CEEECTTSSEEEEEETTTTEEEEEETT-TCC--EEEEEECCBTTEEE-------ECTTCEEECTTSSEEEEEEEEEEECS
T ss_pred ceEEcCCCCEEEEEeCCCCeEEEEECC-CCC--eEeeEEcCCccccc-------ccccceEECCCCCEEEEEeccccccc
Confidence 368999999999999999999999763 343 33444443211001 12467999999999999973
Q ss_pred -----CCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEE
Q 027522 78 -----LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVT 152 (222)
Q Consensus 78 -----gh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~Lyva 152 (222)
..+.|.+|++. +++.+..+.. |.. |+.+++||||++||++
T Consensus 108 ~~~~~~~~~i~v~d~~---~~~~~~~~~~----------------------------~~~----~~~~~~s~dg~~l~~~ 152 (337)
T 1pby_B 108 THFEVQPTRVALYDAE---TLSRRKAFEA----------------------------PRQ----ITMLAWARDGSKLYGL 152 (337)
T ss_dssp SCEEECCCEEEEEETT---TTEEEEEEEC----------------------------CSS----CCCEEECTTSSCEEEE
T ss_pred ccccccCceEEEEECC---CCcEEEEEeC----------------------------CCC----cceeEECCCCCEEEEe
Confidence 35889999874 3555544443 233 8899999999999999
Q ss_pred eCCCCccccc
Q 027522 153 NSLFSAWDCQ 162 (222)
Q Consensus 153 Nsl~~~wd~Q 162 (222)
+.-...||.+
T Consensus 153 ~~~i~~~d~~ 162 (337)
T 1pby_B 153 GRDLHVMDPE 162 (337)
T ss_dssp SSSEEEEETT
T ss_pred CCeEEEEECC
Confidence 7666666644
No 37
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.97 E-value=1.2e-08 Score=84.89 Aligned_cols=101 Identities=10% Similarity=0.045 Sum_probs=72.3
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCC--CCc
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWL--HGD 81 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRg--h~s 81 (222)
-++++|+++.+|+.++.+++|.++..+ |+.. +++ .+. +. ..+.+|.++|++++||+++++ .+.
T Consensus 83 ~ia~d~~~~~lyv~d~~~~~I~~~~~~--g~~~--~~~--~~~---~~------~~P~~i~vd~~~g~lyv~~~~~~~~~ 147 (267)
T 1npe_A 83 GIALDHLGRTIFWTDSQLDRIEVAKMD--GTQR--RVL--FDT---GL------VNPRGIVTDPVRGNLYWTDWNRDNPK 147 (267)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETT--SCSC--EEE--ECS---SC------SSEEEEEEETTTTEEEEEECCSSSCE
T ss_pred EEEEEecCCeEEEEECCCCEEEEEEcC--CCCE--EEE--EEC---CC------CCccEEEEeeCCCEEEEEECCCCCcE
Confidence 368999999999999999999999875 3321 111 111 11 346899999999999999987 578
Q ss_pred EEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 82 IRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 82 I~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
|.+++++. ...+. +... +.. .|+.++++++|++||||+
T Consensus 148 I~~~~~dg-~~~~~---~~~~--------------------------~~~----~P~gia~d~~~~~lyv~d 185 (267)
T 1npe_A 148 IETSHMDG-TNRRI---LAQD--------------------------NLG----LPNGLTFDAFSSQLCWVD 185 (267)
T ss_dssp EEEEETTS-CCCEE---EECT--------------------------TCS----CEEEEEEETTTTEEEEEE
T ss_pred EEEEecCC-CCcEE---EEEC--------------------------CCC----CCcEEEEcCCCCEEEEEE
Confidence 88887732 22221 1110 112 399999999999999999
No 38
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.97 E-value=1.6e-08 Score=89.06 Aligned_cols=136 Identities=17% Similarity=0.139 Sum_probs=91.6
Q ss_pred eEEEcCCCCeEEEEecc--CceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCc
Q 027522 4 RFLHDPSKDIGFVGCAL--ASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGD 81 (222)
Q Consensus 4 r~afhP~g~~aYvv~EL--sstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~s 81 (222)
-++|+|++ ++|+.+.+ +++|.++... +|+ ..+.+.+++..+ +..|. ++|+.||+++|..+.
T Consensus 25 Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~-tg~--v~~~i~l~~~~f-----------geGi~--~~g~~lyv~t~~~~~ 87 (266)
T 2iwa_A 25 GLVYAEND-TLFESTGLYGRSSVRQVALQ-TGK--VENIHKMDDSYF-----------GEGLT--LLNEKLYQVVWLKNI 87 (266)
T ss_dssp EEEECSTT-EEEEEECSTTTCEEEEEETT-TCC--EEEEEECCTTCC-----------EEEEE--EETTEEEEEETTCSE
T ss_pred cEEEeCCC-eEEEECCCCCCCEEEEEECC-CCC--EEEEEecCCCcc-----------eEEEE--EeCCEEEEEEecCCE
Confidence 47899984 99999976 7899999863 453 455666543222 23344 458899999999999
Q ss_pred EEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCcccc
Q 027522 82 IRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDC 161 (222)
Q Consensus 82 I~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~ 161 (222)
|.+||. .+.++++++..+ . |.-+.|++||++|||+|
T Consensus 88 v~viD~---~t~~v~~~i~~g-----------------------------~----~~g~glt~Dg~~l~vs~-------- 123 (266)
T 2iwa_A 88 GFIYDR---RTLSNIKNFTHQ-----------------------------M----KDGWGLATDGKILYGSD-------- 123 (266)
T ss_dssp EEEEET---TTTEEEEEEECC-----------------------------S----SSCCEEEECSSSEEEEC--------
T ss_pred EEEEEC---CCCcEEEEEECC-----------------------------C----CCeEEEEECCCEEEEEC--------
Confidence 999966 358888888763 1 44467999999999999
Q ss_pred ccccccccCCcEEEEEEeeCCCCCeeeccceeEecCCCCCCCcceeeeecCCC
Q 027522 162 QFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGG 214 (222)
Q Consensus 162 Q~yp~~~s~~~~i~~~dvd~~~G~l~~~~~f~vdf~~~~~g~~~~h~~r~~~g 214 (222)
. +..+..+ |++|.+. .....|.-++.|.. .+.||-|-+|
T Consensus 124 g--------s~~l~vi--D~~t~~v--~~~I~Vg~~~~p~~--~~nele~~dg 162 (266)
T 2iwa_A 124 G--------TSILYEI--DPHTFKL--IKKHNVKYNGHRVI--RLNELEYING 162 (266)
T ss_dssp S--------SSEEEEE--CTTTCCE--EEEEECEETTEECC--CEEEEEEETT
T ss_pred C--------CCeEEEE--ECCCCcE--EEEEEECCCCcccc--cceeEEEECC
Confidence 2 4577777 6677654 33444443322221 4556666544
No 39
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.94 E-value=4.4e-08 Score=84.77 Aligned_cols=99 Identities=15% Similarity=0.224 Sum_probs=75.3
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCC----
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH---- 79 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh---- 79 (222)
.++|+|+++++|+.+..+++|.+|..+ +++ ..+.+.. . ..+..|.+||||++||+++...
T Consensus 307 ~~~~~~~g~~l~~~~~~~~~v~v~d~~-~~~--~~~~~~~-----~--------~~~~~~~~s~dg~~l~~~~~~~~~~~ 370 (433)
T 3bws_A 307 HIVSGNTENKIYVSDMCCSKIEVYDLK-EKK--VQKSIPV-----F--------DKPNTIALSPDGKYLYVSCRGPNHPT 370 (433)
T ss_dssp EEEECSSTTEEEEEETTTTEEEEEETT-TTE--EEEEEEC-----S--------SSEEEEEECTTSSEEEEEECCCCCTT
T ss_pred eEEECCCCCEEEEEecCCCEEEEEECC-CCc--EEEEecC-----C--------CCCCeEEEcCCCCEEEEEecCCCccc
Confidence 478999999999999999999999874 332 2333321 1 3357999999999999999875
Q ss_pred ----------CcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEE
Q 027522 80 ----------GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRL 149 (222)
Q Consensus 80 ----------~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~L 149 (222)
+.|.+|++. +++++..+.. +.. |+.++++|||++|
T Consensus 371 ~~~~~~g~~dg~v~~~d~~---~~~~~~~~~~----------------------------~~~----~~~~~~s~dg~~l 415 (433)
T 3bws_A 371 EGYLKKGLVLGKVYVIDTT---TDTVKEFWEA----------------------------GNQ----PTGLDVSPDNRYL 415 (433)
T ss_dssp TCTTSCCSSCCEEEEEETT---TTEEEEEEEC----------------------------SSS----EEEEEECTTSCEE
T ss_pred cccccccccceEEEEEECC---CCcEEEEecC----------------------------CCC----CceEEEcCCCCEE
Confidence 488888773 3666554443 223 8899999999999
Q ss_pred EEEe
Q 027522 150 YVTN 153 (222)
Q Consensus 150 yvaN 153 (222)
++++
T Consensus 416 ~~~~ 419 (433)
T 3bws_A 416 VISD 419 (433)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9998
No 40
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.93 E-value=2e-08 Score=86.86 Aligned_cols=100 Identities=10% Similarity=0.198 Sum_probs=71.2
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCC-CCcEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWL-HGDIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRg-h~sI~ 83 (222)
++++|++ .+||.++.+++|.++... ++ +..+.+.+.... ... ..+..|.+ +++.|||++++ .+.|.
T Consensus 89 i~~~~~g-~lyv~~~~~~~v~~iD~~-t~--~~~~~i~~g~~~-~~~------~~p~~i~~--~~~~lyv~~~~~~~~v~ 155 (328)
T 3dsm_A 89 IHFLSDE-KAYVTQIWDYRIFIINPK-TY--EITGYIECPDMD-MES------GSTEQMVQ--YGKYVYVNCWSYQNRIL 155 (328)
T ss_dssp EEEEETT-EEEEEEBSCSEEEEEETT-TT--EEEEEEECTTCC-TTT------CBCCCEEE--ETTEEEEEECTTCCEEE
T ss_pred EEEeCCC-eEEEEECCCCeEEEEECC-CC--eEEEEEEcCCcc-ccC------CCcceEEE--ECCEEEEEcCCCCCEEE
Confidence 6788998 899999889999999753 33 445556554310 000 23466777 79999999996 88999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|+.. +.+++.++.+ |.. |+.++++|||+ |||++
T Consensus 156 viD~~---t~~~~~~i~~----------------------------g~~----p~~i~~~~dG~-l~v~~ 189 (328)
T 3dsm_A 156 KIDTE---TDKVVDELTI----------------------------GIQ----PTSLVMDKYNK-MWTIT 189 (328)
T ss_dssp EEETT---TTEEEEEEEC----------------------------SSC----BCCCEECTTSE-EEEEB
T ss_pred EEECC---CCeEEEEEEc----------------------------CCC----ccceEEcCCCC-EEEEE
Confidence 99763 4677666665 333 99999999998 56665
No 41
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.92 E-value=1.6e-08 Score=89.03 Aligned_cols=113 Identities=13% Similarity=0.150 Sum_probs=81.7
Q ss_pred cCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEe
Q 027522 8 DPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNI 87 (222)
Q Consensus 8 hP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~vf~i 87 (222)
.++++.+|++++.+++|+++..+ +++....+... .+ .| +.|++||+.||+|| +.+.|.++
T Consensus 72 ~~~g~~lyv~t~~~~~v~viD~~---t~~v~~~i~~g-~~-~g------------~glt~Dg~~l~vs~-gs~~l~vi-- 131 (266)
T 2iwa_A 72 TLLNEKLYQVVWLKNIGFIYDRR---TLSNIKNFTHQ-MK-DG------------WGLATDGKILYGSD-GTSILYEI-- 131 (266)
T ss_dssp EEETTEEEEEETTCSEEEEEETT---TTEEEEEEECC-SS-SC------------CEEEECSSSEEEEC-SSSEEEEE--
T ss_pred EEeCCEEEEEEecCCEEEEEECC---CCcEEEEEECC-CC-Ce------------EEEEECCCEEEEEC-CCCeEEEE--
Confidence 33478999999999999998753 45666666654 11 22 34889999999999 88888888
Q ss_pred cCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCcccccccccc
Q 027522 88 EDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPEL 167 (222)
Q Consensus 88 ~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q~yp~~ 167 (222)
|+.+.+.+.+|.++.. |+ ....|+.|.+. || +|||+| .
T Consensus 132 -D~~t~~v~~~I~Vg~~-------------------------~~-p~~~~nele~~-dg-~lyvn~--------~----- 169 (266)
T 2iwa_A 132 -DPHTFKLIKKHNVKYN-------------------------GH-RVIRLNELEYI-NG-EVWANI--------W----- 169 (266)
T ss_dssp -CTTTCCEEEEEECEET-------------------------TE-ECCCEEEEEEE-TT-EEEEEE--------T-----
T ss_pred -ECCCCcEEEEEEECCC-------------------------Cc-ccccceeEEEE-CC-EEEEec--------C-----
Confidence 5566888888888521 11 12237788888 66 899998 3
Q ss_pred ccCCcEEEEEEeeCCCCCe
Q 027522 168 KEKGSHMLQIDVNSEKGGM 186 (222)
Q Consensus 168 ~s~~~~i~~~dvd~~~G~l 186 (222)
.+..|.+| |+.||+.
T Consensus 170 --~~~~V~vI--D~~tg~V 184 (266)
T 2iwa_A 170 --QTDCIARI--SAKDGTL 184 (266)
T ss_dssp --TSSEEEEE--ETTTCCE
T ss_pred --CCCeEEEE--ECCCCcE
Confidence 46688888 6688875
No 42
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.92 E-value=1.2e-08 Score=87.36 Aligned_cols=119 Identities=12% Similarity=0.101 Sum_probs=81.5
Q ss_pred cCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEe
Q 027522 8 DPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNI 87 (222)
Q Consensus 8 hP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~vf~i 87 (222)
+|+++++||.+...++|.+|..+.+|++...+++... ..+..|.+++||+ |||++++.+.|.+|+
T Consensus 175 s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-------------~~P~gi~vd~dG~-l~va~~~~~~V~~~~- 239 (306)
T 2p4o_A 175 KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-------------TNIDDFAFDVEGN-LYGATHIYNSVVRIA- 239 (306)
T ss_dssp EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES-------------CCCSSEEEBTTCC-EEEECBTTCCEEEEC-
T ss_pred CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc-------------CCCCCeEECCCCC-EEEEeCCCCeEEEEC-
Confidence 7889999999999999999998655655433433211 2347899999996 699999999999984
Q ss_pred cCCCCCeEE--EEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEEC---CCCCEEEEEeCCCCccccc
Q 027522 88 EDPKNPVLT--GQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLS---LDGKRLYVTNSLFSAWDCQ 162 (222)
Q Consensus 88 ~d~~~~~L~--~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~ls---pdGk~LyvaNsl~~~wd~Q 162 (222)
+. +++. ..+.. .... |..++++ |||++|||+|+ .....+
T Consensus 240 --~~-G~~~~~~~~~~---------------------------~~~~----p~~~a~~g~~~d~~~LyVt~~--~~~~~~ 283 (306)
T 2p4o_A 240 --PD-RSTTIIAQAEQ---------------------------GVIG----STAVAFGQTEGDCTAIYVVTN--GGMFLP 283 (306)
T ss_dssp --TT-CCEEEEECGGG---------------------------TCTT----EEEEEECCSTTTTTEEEEEEC--TTSSSC
T ss_pred --CC-CCEEEEeeccc---------------------------ccCC----ceEEEEecccCCCCEEEEECC--CCcccC
Confidence 32 4441 11111 1233 9999999 99999999996 233333
Q ss_pred cccccccCCcEEEEEEe
Q 027522 163 FYPELKEKGSHMLQIDV 179 (222)
Q Consensus 163 ~yp~~~s~~~~i~~~dv 179 (222)
.. .......++++++
T Consensus 284 ~~--~~~~~g~v~~i~~ 298 (306)
T 2p4o_A 284 PP--TGVVPANVVRLEV 298 (306)
T ss_dssp CT--TCCCCEEEEEEEC
T ss_pred CC--cccccceEEEEec
Confidence 20 1123456888866
No 43
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.89 E-value=1.1e-09 Score=99.67 Aligned_cols=85 Identities=6% Similarity=-0.062 Sum_probs=60.8
Q ss_pred EEEcCCCCeEEEEe---------ccCceEEEEEeCCCCCeeEEEEEEec-Cccc-ccccCCCCCCceeEEEEcCCCCEEE
Q 027522 5 FLHDPSKDIGFVGC---------ALASTMVRFSKTQDGSWNHEVAISVK-SLKV-QNWILPEMPGLITDFLISLDDRFLY 73 (222)
Q Consensus 5 ~afhP~g~~aYvv~---------ELsstV~~~~~d~~g~~~~~q~is~~-p~~~-~g~~~~~~~~~~adI~iSpDgrfLY 73 (222)
++|+|+|+++||.| |-+++|.++.-. +++....|.++ +..+ .+ ..+..|.+|||||+||
T Consensus 70 i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~---T~~vv~~I~v~~~~~~~~g-------~~P~~ia~SpDGk~ly 139 (368)
T 1mda_H 70 AVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPV---TFLPIADIELPDAPRFSVG-------PRVHIIGNCASSACLL 139 (368)
T ss_dssp EEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTT---TCCEEEEEEETTSCSCCBS-------CCTTSEEECTTSSCEE
T ss_pred eEECCCCCEEEEEcccccccccCCCCCEEEEEECC---CCCEEEEEECCCccccccC-------CCcceEEEcCCCCEEE
Confidence 68999999999999 789999999642 45667777775 1111 11 2357899999999999
Q ss_pred EEeCC-CCcEEEEEecCCCCCeEEEEEEecc
Q 027522 74 FSNWL-HGDIRQYNIEDPKNPVLTGQIWVGG 103 (222)
Q Consensus 74 vSnRg-h~sI~vf~i~d~~~~~L~~~v~~gG 103 (222)
|+|.+ +++|.+ ++-|..+ +.+|.++|
T Consensus 140 Van~~~~~~v~V-~~iD~~t---v~~i~v~~ 166 (368)
T 1mda_H 140 FFLFGSSAAAGL-SVPGASD---DQLTKSAS 166 (368)
T ss_dssp EEECSSSCEEEE-EETTTEE---EEEEECSS
T ss_pred EEccCCCCeEEE-EEEchhh---ceEEECCC
Confidence 99997 577887 2224322 56666643
No 44
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.88 E-value=3.3e-08 Score=81.52 Aligned_cols=96 Identities=9% Similarity=0.132 Sum_probs=66.6
Q ss_pred EEcCCCCeEEEEeccCceE-----------------------EEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeE
Q 027522 6 LHDPSKDIGFVGCALASTM-----------------------VRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITD 62 (222)
Q Consensus 6 afhP~g~~aYvv~ELsstV-----------------------~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~ad 62 (222)
+|+|+++++|+.++.+..+ .++.. .+++.. .+.+.+. +..+..
T Consensus 180 ~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~~~~~~---~~~~~~~----------~~~~~~ 245 (337)
T 1pby_B 180 YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDL-ETGEMA---MREVRIM----------DVFYFS 245 (337)
T ss_dssp BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEET-TTCCEE---EEEEEEC----------SSCEEE
T ss_pred eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeC-CCCCce---EeecCCC----------CCceee
Confidence 6788999888888877664 33332 233332 2222211 134578
Q ss_pred EEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEE
Q 027522 63 FLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQL 142 (222)
Q Consensus 63 I~iSpDgrfLYvSnRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~l 142 (222)
|.+||||++||++ .+.|.+|++. +++++..+.. +.. |..+++
T Consensus 246 ~~~s~dg~~l~~~---~~~v~~~d~~---~~~~~~~~~~----------------------------~~~----~~~~~~ 287 (337)
T 1pby_B 246 TAVNPAKTRAFGA---YNVLESFDLE---KNASIKRVPL----------------------------PHS----YYSVNV 287 (337)
T ss_dssp EEECTTSSEEEEE---ESEEEEEETT---TTEEEEEEEC----------------------------SSC----CCEEEE
T ss_pred EEECCCCCEEEEe---CCeEEEEECC---CCcCcceecC----------------------------CCc----eeeEEE
Confidence 9999999999999 4889999874 3666555544 223 889999
Q ss_pred CCCCCEEEEEe
Q 027522 143 SLDGKRLYVTN 153 (222)
Q Consensus 143 spdGk~LyvaN 153 (222)
+|||++||+++
T Consensus 288 s~dg~~l~~~~ 298 (337)
T 1pby_B 288 STDGSTVWLGG 298 (337)
T ss_dssp CTTSCEEEEES
T ss_pred CCCCCEEEEEc
Confidence 99999999986
No 45
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.86 E-value=9.1e-08 Score=79.48 Aligned_cols=113 Identities=14% Similarity=0.088 Sum_probs=78.9
Q ss_pred EEEcCCCCeEEEEecc--CceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcE
Q 027522 5 FLHDPSKDIGFVGCAL--ASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDI 82 (222)
Q Consensus 5 ~afhP~g~~aYvv~EL--sstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI 82 (222)
++++|++.++|+.++. +++|.++..+ |+.. +++.. . +. ..+..|.+++|+++||+++++.+.|
T Consensus 127 i~vd~~~g~lyv~~~~~~~~~I~~~~~d--g~~~--~~~~~--~---~~------~~P~gia~d~~~~~lyv~d~~~~~I 191 (267)
T 1npe_A 127 IVTDPVRGNLYWTDWNRDNPKIETSHMD--GTNR--RILAQ--D---NL------GLPNGLTFDAFSSQLCWVDAGTHRA 191 (267)
T ss_dssp EEEETTTTEEEEEECCSSSCEEEEEETT--SCCC--EEEEC--T---TC------SCEEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEeeCCCEEEEEECCCCCcEEEEEecC--CCCc--EEEEE--C---CC------CCCcEEEEcCCCCEEEEEECCCCEE
Confidence 6899999999999987 5789888764 3321 22211 1 11 4579999999999999999999999
Q ss_pred EEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCccccc
Q 027522 83 RQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQ 162 (222)
Q Consensus 83 ~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q 162 (222)
.+|+.+. ..+. .+.. .+.. |..+++ |+++||||| +
T Consensus 192 ~~~~~~g---~~~~-~~~~---------------------------~~~~----P~gi~~--d~~~lyva~--------~ 226 (267)
T 1npe_A 192 ECLNPAQ---PGRR-KVLE---------------------------GLQY----PFAVTS--YGKNLYYTD--------W 226 (267)
T ss_dssp EEEETTE---EEEE-EEEE---------------------------CCCS----EEEEEE--ETTEEEEEE--------T
T ss_pred EEEecCC---CceE-EEec---------------------------CCCC----ceEEEE--eCCEEEEEE--------C
Confidence 9998732 1121 1111 1233 877665 689999999 3
Q ss_pred cccccccCCcEEEEEEeeCCCCCe
Q 027522 163 FYPELKEKGSHMLQIDVNSEKGGM 186 (222)
Q Consensus 163 ~yp~~~s~~~~i~~~dvd~~~G~l 186 (222)
.+..|.++ |+.+|++
T Consensus 227 -------~~~~v~~~--d~~~g~~ 241 (267)
T 1npe_A 227 -------KTNSVIAM--DLAISKE 241 (267)
T ss_dssp -------TTTEEEEE--ETTTTEE
T ss_pred -------CCCeEEEE--eCCCCCc
Confidence 46778888 5577865
No 46
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.84 E-value=8.9e-08 Score=79.26 Aligned_cols=118 Identities=10% Similarity=0.096 Sum_probs=83.0
Q ss_pred EEEc----CCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCC
Q 027522 5 FLHD----PSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHG 80 (222)
Q Consensus 5 ~afh----P~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~ 80 (222)
++++ |+++.+|+.+..+..|.+|..+.+|++...+.....+... ...+..|.+++||+ ||+++++.+
T Consensus 177 i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~--------~~~p~~i~~d~~G~-l~v~~~~~~ 247 (314)
T 1pjx_A 177 IAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTH--------EGGADGMDFDEDNN-LLVANWGSS 247 (314)
T ss_dssp EEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCS--------SCEEEEEEEBTTCC-EEEEEETTT
T ss_pred EEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCC--------CCCCCceEECCCCC-EEEEEcCCC
Confidence 5788 9999999999888999999865446665544443322110 03457899999995 889998888
Q ss_pred cEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCccc
Q 027522 81 DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWD 160 (222)
Q Consensus 81 sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd 160 (222)
.|.+|+. .+++++..+... ... |..+++++||++|||++
T Consensus 248 ~i~~~d~---~~g~~~~~~~~~---------------------------~~~----~~~i~~~~dg~~l~v~~------- 286 (314)
T 1pjx_A 248 HIEVFGP---DGGQPKMRIRCP---------------------------FEK----PSNLHFKPQTKTIFVTE------- 286 (314)
T ss_dssp EEEEECT---TCBSCSEEEECS---------------------------SSC----EEEEEECTTSSEEEEEE-------
T ss_pred EEEEEcC---CCCcEeEEEeCC---------------------------CCC----ceeEEECCCCCEEEEEe-------
Confidence 8999854 223333333321 123 89999999999999998
Q ss_pred cccccccccCCcEEEEEEee
Q 027522 161 CQFYPELKEKGSHMLQIDVN 180 (222)
Q Consensus 161 ~Q~yp~~~s~~~~i~~~dvd 180 (222)
.++..|++++++
T Consensus 287 --------~~~~~l~~~~~~ 298 (314)
T 1pjx_A 287 --------HENNAVWKFEWQ 298 (314)
T ss_dssp --------TTTTEEEEEECS
T ss_pred --------CCCCeEEEEeCC
Confidence 345678888775
No 47
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.83 E-value=5e-08 Score=81.02 Aligned_cols=76 Identities=12% Similarity=0.124 Sum_probs=54.4
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcc-cccccCCCCCCceeEEEEcCCCCEEEEEeCC----
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK-VQNWILPEMPGLITDFLISLDDRFLYFSNWL---- 78 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~-~~g~~~~~~~~~~adI~iSpDgrfLYvSnRg---- 78 (222)
-++|+|+|+++|+.+.-+.+|.++..+ ++ +....+.+...+ ..+ ..+..|.+||||++||+++..
T Consensus 47 ~~~~s~dg~~~~v~~~~~~~i~~~d~~-t~--~~~~~~~~~~~~~~~~-------~~~~~~~~spdg~~l~~~~~~~~~~ 116 (349)
T 1jmx_B 47 TAMMAPDNRTAYVLNNHYGDIYGIDLD-TC--KNTFHANLSSVPGEVG-------RSMYSFAISPDGKEVYATVNPTQRL 116 (349)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETT-TT--EEEEEEESCCSTTEEE-------ECSSCEEECTTSSEEEEEEEEEEEC
T ss_pred eeEECCCCCEEEEEeCCCCcEEEEeCC-CC--cEEEEEEccccccccc-------ccccceEECCCCCEEEEEccccccc
Confidence 468999999999999989999998753 34 333444432110 001 224789999999999999965
Q ss_pred -------CCcEEEEEecC
Q 027522 79 -------HGDIRQYNIED 89 (222)
Q Consensus 79 -------h~sI~vf~i~d 89 (222)
.+.|.+|++..
T Consensus 117 ~~~~~~~~~~i~~~d~~~ 134 (349)
T 1jmx_B 117 NDHYVVKPPRLEVFSTAD 134 (349)
T ss_dssp SSCEEECCCEEEEEEGGG
T ss_pred ccccccCCCeEEEEECCC
Confidence 57899998853
No 48
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.79 E-value=1.7e-07 Score=77.77 Aligned_cols=106 Identities=14% Similarity=0.056 Sum_probs=73.5
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
.+++++ +.+|+.+..+++|.++..+ ++ +..+.+..+.. ..+..+.+||||++||+++...+.|.+
T Consensus 5 ~~~~~~-~~~~v~~~~~~~v~~~d~~-~~--~~~~~~~~~~~-----------~~~~~~~~s~dg~~~~v~~~~~~~i~~ 69 (349)
T 1jmx_B 5 PALKAG-HEYMIVTNYPNNLHVVDVA-SD--TVYKSCVMPDK-----------FGPGTAMMAPDNRTAYVLNNHYGDIYG 69 (349)
T ss_dssp CCCCTT-CEEEEEEETTTEEEEEETT-TT--EEEEEEECSSC-----------CSSCEEEECTTSSEEEEEETTTTEEEE
T ss_pred ccccCC-CEEEEEeCCCCeEEEEECC-CC--cEEEEEecCCC-----------CCCceeEECCCCCEEEEEeCCCCcEEE
Confidence 355654 5568888889999999763 34 33444444310 124789999999999999998999999
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
|++. +++.+..+..++. | ...|.. |+.+++||||++||+++
T Consensus 70 ~d~~---t~~~~~~~~~~~~------------------~---~~~~~~----~~~~~~spdg~~l~~~~ 110 (349)
T 1jmx_B 70 IDLD---TCKNTFHANLSSV------------------P---GEVGRS----MYSFAISPDGKEVYATV 110 (349)
T ss_dssp EETT---TTEEEEEEESCCS------------------T---TEEEEC----SSCEEECTTSSEEEEEE
T ss_pred EeCC---CCcEEEEEEcccc------------------c---cccccc----ccceEECCCCCEEEEEc
Confidence 9874 3566555554210 0 011333 89999999999999998
No 49
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.78 E-value=7.7e-08 Score=91.63 Aligned_cols=148 Identities=17% Similarity=0.172 Sum_probs=97.8
Q ss_pred cCCCCeEEEEeccC------ceEEEEEeCCCCCeeE---EEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCC
Q 027522 8 DPSKDIGFVGCALA------STMVRFSKTQDGSWNH---EVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWL 78 (222)
Q Consensus 8 hP~g~~aYvv~ELs------stV~~~~~d~~g~~~~---~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRg 78 (222)
+++|+++|+.+-.+ ..|.++..+.+|.|.. .+.+.. + ..+..|+++|++++||++++.
T Consensus 201 d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~----~---------~~p~giavdp~~g~LYvtd~~ 267 (496)
T 3kya_A 201 ADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA----Y---------KQCNGATIHPINGELYFNSYE 267 (496)
T ss_dssp BCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE----E---------SCCCCEEECTTTCCEEEEETT
T ss_pred CCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeecc----C---------CCceEEEEcCCCCeEEEEECC
Confidence 99999999998775 2477776655677742 122221 1 234788999999999999999
Q ss_pred CCcEEEEEecCC----CCCeE-----------EEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEEC
Q 027522 79 HGDIRQYNIEDP----KNPVL-----------TGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLS 143 (222)
Q Consensus 79 h~sI~vf~i~d~----~~~~L-----------~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~ls 143 (222)
++.|.+|+++.. .++++ ..++..-+ .+. +|+.++++
T Consensus 268 ~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~-------------------------~~~----~p~~ia~~ 318 (496)
T 3kya_A 268 KGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIA-------------------------DPS----WEFQIFIH 318 (496)
T ss_dssp TTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECS-------------------------SSS----CCEEEEEC
T ss_pred CCEEEEEecccccccccCceeecccccccccccceeEecC-------------------------CCC----CceEEEEc
Confidence 999999988510 01221 11221100 122 39999999
Q ss_pred CCCCEEEEEeCCCCccccccccccccCCcEEEEEEeeCCCCCeeeccceeEec-C--CCCCCCcceeeeecCC
Q 027522 144 LDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDF-E--AEPDGPALAHEMRYPG 213 (222)
Q Consensus 144 pdGk~LyvaNsl~~~wd~Q~yp~~~s~~~~i~~~dvd~~~G~l~~~~~f~vdf-~--~~~~g~~~~h~~r~~~ 213 (222)
|+|++||||. +.+..|.+++.|..+|.+. +....+-. + +-.+||...-++.+|-
T Consensus 319 p~G~~lYvaD---------------~~~h~I~kid~dg~~~~~~-~~~~~aG~~g~~G~~DG~~~~a~f~~P~ 375 (496)
T 3kya_A 319 PTGKYAYFGV---------------INNHYFMRSDYDEIKKEFI-TPYNFVGGYKQSGYRDDVGTEARMNNPC 375 (496)
T ss_dssp TTSSEEEEEE---------------TTTTEEEEEEEETTTTEEC-CCEEEEEBTTBCCCBCCBGGGCBCSSEE
T ss_pred CCCCEEEEEe---------------CCCCEEEEEecCCCcceec-ccEEecCCCCCCcccCCcccccccCCCe
Confidence 9999999998 5789999999998887542 11122221 1 1226877766777777
No 50
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.75 E-value=6.2e-07 Score=74.76 Aligned_cols=112 Identities=13% Similarity=0.184 Sum_probs=80.7
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCe-eEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSW-NHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~-~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
++|+|+|+.. +.+-.+.+|.+|..+++|++ ...+++ .. .. ..+..|.+++||+ |||++ .+.|.
T Consensus 177 i~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~-----~~------~~p~~i~~d~~G~-l~v~~--~~~v~ 240 (296)
T 3e5z_A 177 LAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TV-----EP------GKTDGLRVDAGGL-IWASA--GDGVH 240 (296)
T ss_dssp EEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CC-----SS------SCCCSEEEBTTSC-EEEEE--TTEEE
T ss_pred EEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eC-----CC------CCCCeEEECCCCC-EEEEc--CCeEE
Confidence 6899999998 88778889999988656777 444444 11 11 3457899999997 88888 67788
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEE-CCCCCEEEEEeCCCCccccc
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQL-SLDGKRLYVTNSLFSAWDCQ 162 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~l-spdGk~LyvaNsl~~~wd~Q 162 (222)
+|+. . ++++..+... . + |..+++ +|||++|||++
T Consensus 241 ~~~~---~-g~~~~~~~~~----------------------------~---~-~~~~~f~~~d~~~L~v~t--------- 275 (296)
T 3e5z_A 241 VLTP---D-GDELGRVLTP----------------------------Q---T-TSNLCFGGPEGRTLYMTV--------- 275 (296)
T ss_dssp EECT---T-SCEEEEEECS----------------------------S---C-CCEEEEESTTSCEEEEEE---------
T ss_pred EECC---C-CCEEEEEECC----------------------------C---C-ceeEEEECCCCCEEEEEc---------
Confidence 8854 2 5565555431 1 1 778899 69999999998
Q ss_pred cccccccCCcEEEEEEeeCCCCCee
Q 027522 163 FYPELKEKGSHMLQIDVNSEKGGMA 187 (222)
Q Consensus 163 ~yp~~~s~~~~i~~~dvd~~~G~l~ 187 (222)
...++++ ++.+++|+
T Consensus 276 --------~~~l~~~--~~~~~~~~ 290 (296)
T 3e5z_A 276 --------STEFWSI--ETNVRGLE 290 (296)
T ss_dssp --------TTEEEEE--ECSCCBCC
T ss_pred --------CCeEEEE--Eccccccc
Confidence 2357777 55777765
No 51
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.73 E-value=3.2e-07 Score=79.29 Aligned_cols=99 Identities=18% Similarity=0.275 Sum_probs=72.6
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCC-----
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWL----- 78 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRg----- 78 (222)
-++|+|+++++|+.+.-+.+|.+|... +++. .+. .+. . ..+..+.+||||++||+++++
T Consensus 216 ~~~~~~~~~~l~~~~~~~~~i~~~d~~-~~~~--~~~---~~~----~------~~~~~~~~~~~g~~l~~~~~~~~~~~ 279 (433)
T 3bws_A 216 ILLYDPIRDLVYCSNWISEDISVIDRK-TKLE--IRK---TDK----I------GLPRGLLLSKDGKELYIAQFSASNQE 279 (433)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETT-TTEE--EEE---CCC----C------SEEEEEEECTTSSEEEEEEEESCTTC
T ss_pred EEEEcCCCCEEEEEecCCCcEEEEECC-CCcE--EEE---ecC----C------CCceEEEEcCCCCEEEEEECCCCccc
Confidence 368999999999999888999998764 3422 222 111 1 336899999999999999984
Q ss_pred --CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 79 --HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 79 --h~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
.+.|.+|++.. ++++..+... .. |+.++++|||++||+++
T Consensus 280 ~~dg~i~~~d~~~---~~~~~~~~~~----------------------------~~----~~~~~~~~~g~~l~~~~ 321 (433)
T 3bws_A 280 SGGGRLGIYSMDK---EKLIDTIGPP----------------------------GN----KRHIVSGNTENKIYVSD 321 (433)
T ss_dssp SCCEEEEEEETTT---TEEEEEEEEE----------------------------EC----EEEEEECSSTTEEEEEE
T ss_pred cCCCeEEEEECCC---CcEEeeccCC----------------------------CC----cceEEECCCCCEEEEEe
Confidence 46788998843 5554443321 12 88999999999999997
No 52
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.67 E-value=2e-06 Score=72.23 Aligned_cols=127 Identities=18% Similarity=0.188 Sum_probs=82.2
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCC-eeEEE-EEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGS-WNHEV-AISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDI 82 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~-~~~~q-~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI 82 (222)
++|+|+|+++|+.+..+..|.+|..+.+|. +.... .+.. .+.+. ..+..|.+++||+ ||+++++.+.|
T Consensus 187 i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~---~~~~~------~~~~~i~~d~~G~-l~v~~~~~~~v 256 (333)
T 2dg1_A 187 IALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPY---YFTGH------EGPDSCCIDSDDN-LYVAMYGQGRV 256 (333)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEE---ECCSS------SEEEEEEEBTTCC-EEEEEETTTEE
T ss_pred eEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEE---ecCCC------CCCCceEECCCCC-EEEEEcCCCEE
Confidence 678999999999988888999998854443 32211 1111 01111 3467899999997 89999888889
Q ss_pred EEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCccccc
Q 027522 83 RQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQ 162 (222)
Q Consensus 83 ~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q 162 (222)
.+|+. +++++..+...+. ..|. ...|..++++|||++||++++ .
T Consensus 257 ~~~d~----~g~~~~~~~~~~~-----------------------~~g~--~~~~~~~~~~~dg~~L~v~~~-------~ 300 (333)
T 2dg1_A 257 LVFNK----RGYPIGQILIPGR-----------------------DEGH--MLRSTHPQFIPGTNQLIICSN-------D 300 (333)
T ss_dssp EEECT----TSCEEEEEECTTG-----------------------GGTC--SCBCCEEEECTTSCEEEEEEE-------C
T ss_pred EEECC----CCCEEEEEEcCCC-----------------------cccc--ccCcceEEECCCCCEEEEEeC-------c
Confidence 99854 2445444443110 0010 002899999999999999983 1
Q ss_pred cccccccCCcEEEEEEee
Q 027522 163 FYPELKEKGSHMLQIDVN 180 (222)
Q Consensus 163 ~yp~~~s~~~~i~~~dvd 180 (222)
. . ...+..+++++.+
T Consensus 301 g-~--~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 301 I-E--MGGGSMLYTVNGF 315 (333)
T ss_dssp G-G--GTCCEEEEEEECS
T ss_pred c-C--CCCCceEEEEecc
Confidence 0 0 1236788988764
No 53
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.66 E-value=8.6e-07 Score=75.12 Aligned_cols=98 Identities=14% Similarity=0.194 Sum_probs=70.4
Q ss_pred EEEcCCCCeEEEEeccC-----ceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCC
Q 027522 5 FLHDPSKDIGFVGCALA-----STMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH 79 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELs-----stV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh 79 (222)
++|+|+++.+|+.+... +.|.+|..+.++ +...++....+ . ..+..|.+++||+ ||+++.
T Consensus 193 l~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~-----~------~~pdgi~~d~~G~-lwv~~~-- 257 (305)
T 3dr2_A 193 LAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVP-----D------GLPDGFCVDRGGW-LWSSSG-- 257 (305)
T ss_dssp EEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCS-----S------SCCCSEEECTTSC-EEECCS--
T ss_pred eEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECC-----C------CCCCeEEECCCCC-EEEecC--
Confidence 68999999999998863 789999876443 44333332211 1 3356799999999 999983
Q ss_pred CcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 80 GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 80 ~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+.|.+|+. .++++.++.+. .. |.++++++||++||+++
T Consensus 258 ~gv~~~~~----~g~~~~~~~~~----------------------------~~----~~~~~f~~d~~~L~it~ 295 (305)
T 3dr2_A 258 TGVCVFDS----DGQLLGHIPTP----------------------------GT----ASNCTFDQAQQRLFITG 295 (305)
T ss_dssp SEEEEECT----TSCEEEEEECS----------------------------SC----CCEEEECTTSCEEEEEE
T ss_pred CcEEEECC----CCCEEEEEECC----------------------------Cc----eeEEEEeCCCCEEEEEc
Confidence 45777743 35666666541 12 88999999999999998
No 54
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.66 E-value=5.7e-07 Score=77.23 Aligned_cols=134 Identities=10% Similarity=0.025 Sum_probs=83.1
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeC-CCCcEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW-LHGDIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnR-gh~sI~ 83 (222)
++++|+|+ +||....+.+|.+|.. +|+......+... ...|.. ...-+.+..|.++|++..|||++. +.+.|.
T Consensus 96 ia~d~~g~-l~v~d~~~~~v~~~~~--~g~~~~~~~~~~~--~~~g~~-~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~ 169 (329)
T 3fvz_A 96 LSIDTDGN-YWVTDVALHQVFKLDP--HSKEGPLLILGRS--MQPGSD-QNHFCQPTDVAVEPSTGAVFVSDGYCNSRIV 169 (329)
T ss_dssp EEECTTSC-EEEEETTTTEEEEECT--TCSSCCSEEESBT--TBCCCS-TTCCSSEEEEEECTTTCCEEEEECSSCCEEE
T ss_pred EEECCCCC-EEEEECCCCEEEEEeC--CCCeEEEEEeccc--CCCCCC-ccccCCCcEEEEeCCCCeEEEEeCCCCCeEE
Confidence 68999999 8999888889988864 4543222222111 001100 001145799999998888999995 889999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCcccccc
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQF 163 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q~ 163 (222)
+|+. .++++..+...|.- ..+.. +. -..|+.++++|++.+||||+
T Consensus 170 ~~~~----~g~~~~~~~~~g~~---------------~~~~~----~~--~~~p~gia~d~~~g~l~v~d---------- 214 (329)
T 3fvz_A 170 QFSP----SGKFVTQWGEESSG---------------SSPRP----GQ--FSVPHSLALVPHLDQLCVAD---------- 214 (329)
T ss_dssp EECT----TSCEEEEECEECCS---------------SSCCT----TE--ESCEEEEEEETTTTEEEEEE----------
T ss_pred EEcC----CCCEEEEeccCCCC---------------CCCCC----cc--cCCCcEEEEECCCCEEEEEE----------
Confidence 9963 25554443322210 00000 00 01399999999988999999
Q ss_pred ccccccCCcEEEEEEeeCCCCCe
Q 027522 164 YPELKEKGSHMLQIDVNSEKGGM 186 (222)
Q Consensus 164 yp~~~s~~~~i~~~dvd~~~G~l 186 (222)
+.+..|.++|. ++|.+
T Consensus 215 -----~~~~~I~~~~~--~~G~~ 230 (329)
T 3fvz_A 215 -----RENGRIQCFKT--DTKEF 230 (329)
T ss_dssp -----TTTTEEEEEET--TTCCE
T ss_pred -----CCCCEEEEEEC--CCCcE
Confidence 35677777755 46655
No 55
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.61 E-value=5.9e-07 Score=82.45 Aligned_cols=120 Identities=15% Similarity=0.231 Sum_probs=79.2
Q ss_pred EEEcCCCCeEEEEeccC----ceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCC
Q 027522 5 FLHDPSKDIGFVGCALA----STMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHG 80 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELs----stV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~ 80 (222)
++++|+|+ +||.+..+ ..+..+.. ++.+.....+. .+ +.+.+|.++|++..||++.+..+
T Consensus 187 iavd~dG~-lyVad~~~~~~~~gv~~~~~--~~~~~~~~~~~----~~---------~~P~giavd~~~G~lyv~d~~~~ 250 (433)
T 4hw6_A 187 VNFTLNGD-MVVVDDQSSDTNTGIYLFTR--ASGFTERLSLC----NA---------RGAKTCAVHPQNGKIYYTRYHHA 250 (433)
T ss_dssp EEECTTCC-EEEEECCSCTTSEEEEEECG--GGTTCCEEEEE----EC---------SSBCCCEECTTTCCEEECBTTCS
T ss_pred EEECCCCC-EEEEcCCCCcccceEEEEEC--CCCeecccccc----cc---------CCCCEEEEeCCCCeEEEEECCCC
Confidence 67899999 99988643 22444432 33333222211 11 44588999998888999999988
Q ss_pred cEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCccc
Q 027522 81 DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWD 160 (222)
Q Consensus 81 sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd 160 (222)
.|.+|+. ..++++..+...| .. +.|..++++|+|++||||+
T Consensus 251 ~V~~~d~---~~g~~~~~~~~~~---------------------------~~--~~~~~ia~dpdG~~LYvad------- 291 (433)
T 4hw6_A 251 MISSYDP---ATGTLTEEEVMMD---------------------------TK--GSNFHIVWHPTGDWAYIIY------- 291 (433)
T ss_dssp EEEEECT---TTCCEEEEEEECS---------------------------CC--SSCEEEEECTTSSEEEEEE-------
T ss_pred EEEEEEC---CCCeEEEEEeccC---------------------------CC--CCcccEEEeCCCCEEEEEe-------
Confidence 8887754 3344422332211 10 1256799999999999999
Q ss_pred cccccccccCCcEEEEEEeeCCCCCee
Q 027522 161 CQFYPELKEKGSHMLQIDVNSEKGGMA 187 (222)
Q Consensus 161 ~Q~yp~~~s~~~~i~~~dvd~~~G~l~ 187 (222)
+.+..|.+++.|..+|.+.
T Consensus 292 --------~~~~~I~~~~~d~~~~~~~ 310 (433)
T 4hw6_A 292 --------NGKHCIYRVDYNRETGKLA 310 (433)
T ss_dssp --------TTTTEEEEEEBCTTTCCBC
T ss_pred --------CCCCEEEEEeCCCCCcccC
Confidence 4688999999988888663
No 56
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.60 E-value=2.4e-06 Score=73.33 Aligned_cols=86 Identities=17% Similarity=0.195 Sum_probs=57.1
Q ss_pred EEEcCCCCeEEEEec-cCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 5 FLHDPSKDIGFVGCA-LASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~E-LsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
++++|+...+||.+- .++.|.+|. .+|++. ..+...... +...+..-..+..|.++||+..|||++++.+.|.
T Consensus 148 ia~~~~~g~lyv~d~~~~~~I~~~~--~~g~~~--~~~~~~g~~--~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~ 221 (329)
T 3fvz_A 148 VAVEPSTGAVFVSDGYCNSRIVQFS--PSGKFV--TQWGEESSG--SSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQ 221 (329)
T ss_dssp EEECTTTCCEEEEECSSCCEEEEEC--TTSCEE--EEECEECCS--SSCCTTEESCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEeCCCCeEEEEeCCCCCeEEEEc--CCCCEE--EEeccCCCC--CCCCCcccCCCcEEEEECCCCEEEEEECCCCEEE
Confidence 789997778899985 788899886 356542 222211100 0000000134799999999999999999999999
Q ss_pred EEEecCCCCCeEEEEE
Q 027522 84 QYNIEDPKNPVLTGQI 99 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v 99 (222)
+|+.+ +++++..+
T Consensus 222 ~~~~~---~G~~~~~~ 234 (329)
T 3fvz_A 222 CFKTD---TKEFVREI 234 (329)
T ss_dssp EEETT---TCCEEEEE
T ss_pred EEECC---CCcEEEEE
Confidence 99874 35555554
No 57
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.60 E-value=1.7e-06 Score=75.00 Aligned_cols=123 Identities=12% Similarity=0.130 Sum_probs=75.1
Q ss_pred eEEEcCCCCeEEEEecc-----CceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeC-
Q 027522 4 RFLHDPSKDIGFVGCAL-----ASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW- 77 (222)
Q Consensus 4 r~afhP~g~~aYvv~EL-----sstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnR- 77 (222)
.++++|+|+ +||+..- +.+|.+|..+ +|+ ..+++.++...... ...+.+|++++++.++|+++.
T Consensus 71 gv~~d~~g~-L~v~D~g~~~~~~~~i~~~d~~-tg~--~~~~~~~~~~~~~~------~~~~~~v~vd~~~g~~yvtd~~ 140 (343)
T 2qe8_A 71 GIKSDGNGI-VWMLDNGNQSKSVPKLVAWDTL-NNQ--LSRVIYLPPPITLS------NSFVNDLAVDLIHNFVYISDPA 140 (343)
T ss_dssp EEEECSSSE-EEEEECHHHHTSCCEEEEEETT-TTE--EEEEEECCTTTSCT------TCCCCEEEEETTTTEEEEEECC
T ss_pred EEEEcCCCc-EEEEcCCCCcCCCCeEEEEECC-CCe--EEEEEECChhhccc------ccccceEEEecCCCEEEEEcCc
Confidence 578999975 8888754 4788888753 454 34555554221111 134589999999999999998
Q ss_pred --CCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCccc------------CCCCeeEEEC
Q 027522 78 --LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRL------------RGGPQMIQLS 143 (222)
Q Consensus 78 --gh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~------------~ggPr~~~ls 143 (222)
+.+.|.+|+... +++...+ .+.... ...|-...+.|+.+ ..+|.-+++|
T Consensus 141 ~~~~~~i~v~d~~~---g~~~r~~--~~~~~~------------~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s 203 (343)
T 2qe8_A 141 PDDKAALIRVDLQT---GLAARVL--QGYPGI------------APEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLD 203 (343)
T ss_dssp SGGGCEEEEEETTT---CCEEEEC--TTCTTT------------SCCSCCCEETTEECBEECTTSCEECCCCCEEEEEEC
T ss_pred cCCCCeEEEEECCC---CCEEEEe--cCCCcc------------cccccceeECCEEEEeccCCCceeceecccceeEec
Confidence 888999998742 3332211 110000 00000011122221 2358899999
Q ss_pred CCCCEEEEEe
Q 027522 144 LDGKRLYVTN 153 (222)
Q Consensus 144 pdGk~LyvaN 153 (222)
|||++||+++
T Consensus 204 ~dg~~ly~~~ 213 (343)
T 2qe8_A 204 AENEWLYLSP 213 (343)
T ss_dssp TTSCEEEEEE
T ss_pred cCCCEEEEEe
Confidence 9999999998
No 58
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.58 E-value=1.1e-06 Score=79.40 Aligned_cols=135 Identities=12% Similarity=0.034 Sum_probs=81.3
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEec-Ccccc-cccCCCCCCceeEEEEcCCCCEEEEEeC-CCC
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVK-SLKVQ-NWILPEMPGLITDFLISLDDRFLYFSNW-LHG 80 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~-p~~~~-g~~~~~~~~~~adI~iSpDgrfLYvSnR-gh~ 80 (222)
.++|+|++..+|+.....++|.++.. +|... ..+-.. ...+. |......-+.+..|.+++||+ ||++++ +.+
T Consensus 271 ~ia~~p~~g~lyv~d~~~~~I~~~~~--~g~~~--~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~ 345 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQNLSSVYKITP--DGECE--WFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGY 345 (409)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECT--TCCEE--EEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTC
T ss_pred cEEEeCCCCEEEEEeCCCCEEEEEec--CCCEE--EEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCC
Confidence 58999999999999999999999965 34422 122111 11110 000000014579999999999 999999 999
Q ss_pred cEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCccc
Q 027522 81 DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWD 160 (222)
Q Consensus 81 sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd 160 (222)
.|++|++.+ +++....-.++.. +..+ ..+. ..+=. .|+.++++++| .||||+
T Consensus 346 ~I~~~~~~~---G~v~~~~g~~~~~---------g~~~--g~~~--~~~~~----~P~giavd~~g-~lyVad------- 397 (409)
T 3hrp_A 346 CLRKLDILD---GYVSTVAGQVDVA---------SQID--GTPL--EATFN----YPYDICYDGEG-GYWIAE------- 397 (409)
T ss_dssp EEEEEETTT---TEEEEEEECTTCB---------SCCC--BSTT--TCCBS----SEEEEEECSSS-EEEEEE-------
T ss_pred EEEEEECCC---CEEEEEeCCCCCC---------CcCC--CChh--ceEeC----CceEEEEcCCC-CEEEEE-------
Confidence 999997633 4442111111100 0000 0000 00012 39999999995 899999
Q ss_pred cccccccccCCcEEEEEEe
Q 027522 161 CQFYPELKEKGSHMLQIDV 179 (222)
Q Consensus 161 ~Q~yp~~~s~~~~i~~~dv 179 (222)
..+..|.++++
T Consensus 398 --------~~n~~Ir~i~~ 408 (409)
T 3hrp_A 398 --------AWGKAIRKYAV 408 (409)
T ss_dssp --------STTCEEEEEEE
T ss_pred --------CCCCeEEEEEe
Confidence 45778888765
No 59
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.57 E-value=1.3e-06 Score=75.47 Aligned_cols=105 Identities=14% Similarity=0.234 Sum_probs=75.4
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeC-CCC-CeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKT-QDG-SWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDI 82 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d-~~g-~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI 82 (222)
++|+|+|+.+|+.+..++.|+++..+ ++| .+...+++...+. . ...+..|.+++||+ ||+++++.+.|
T Consensus 184 i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~---~------~~~p~gi~~d~~G~-lwva~~~~~~v 253 (326)
T 2ghs_A 184 ICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTG---I------KGGMDGSVCDAEGH-IWNARWGEGAV 253 (326)
T ss_dssp EEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTT---S------SSEEEEEEECTTSC-EEEEEETTTEE
T ss_pred eEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCC---C------CCCCCeeEECCCCC-EEEEEeCCCEE
Confidence 67899999999999888999999875 456 5433333322111 0 13467899999996 89999988888
Q ss_pred EEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEEC-CCCCEEEEEeC
Q 027522 83 RQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLS-LDGKRLYVTNS 154 (222)
Q Consensus 83 ~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~ls-pdGk~LyvaNs 154 (222)
.+|+. +++++..+... +.. |..++++ +||++|||+++
T Consensus 254 ~~~d~----~g~~~~~i~~~---------------------------~~~----~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 254 DRYDT----DGNHIARYEVP---------------------------GKQ----TTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEECT----TCCEEEEEECS---------------------------CSB----EEEEEEESTTSCEEEEEEB
T ss_pred EEECC----CCCEEEEEECC---------------------------CCC----cEEEEEecCCCCEEEEEec
Confidence 88844 35555555431 223 8899998 99999999973
No 60
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.56 E-value=5.5e-07 Score=79.79 Aligned_cols=72 Identities=7% Similarity=0.014 Sum_probs=55.9
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|+|+++++++.+..+++|.+|.....+.. ...+... . ..+..|.+||+++++++|+..++.|.
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~--~~~~~~h----~--------~~v~~i~~sp~~~~~l~s~~~d~~i~ 347 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLK--LHSFESH----K--------DEIFQVQWSPHNETILASSGTDRRLH 347 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSC--SEEEECC----S--------SCEEEEEECSSCTTEEEEEETTSCCE
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCC--eEEeecC----C--------CCEEEEEECCCCCCEEEEEeCCCcEE
Confidence 47899999999999999999999987532221 1111110 1 45689999999999999999999999
Q ss_pred EEEecC
Q 027522 84 QYNIED 89 (222)
Q Consensus 84 vf~i~d 89 (222)
+|++..
T Consensus 348 iwd~~~ 353 (430)
T 2xyi_A 348 VWDLSK 353 (430)
T ss_dssp EEEGGG
T ss_pred EEeCCC
Confidence 999965
No 61
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.56 E-value=1.2e-06 Score=77.76 Aligned_cols=112 Identities=14% Similarity=0.126 Sum_probs=80.1
Q ss_pred cCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEe
Q 027522 8 DPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNI 87 (222)
Q Consensus 8 hP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~vf~i 87 (222)
.+.++.+|+++.-++.+++|..+ +++.+..+..++ +|| -|++||+.||+|+ +.+.|.++
T Consensus 102 t~~g~~Ly~ltw~~~~v~V~D~~---Tl~~~~ti~~~~---eGw------------GLt~Dg~~L~vSd-Gs~~l~~i-- 160 (268)
T 3nok_A 102 ASDGERLYQLTWTEGLLFTWSGM---PPQRERTTRYSG---EGW------------GLCYWNGKLVRSD-GGTMLTFH-- 160 (268)
T ss_dssp EECSSCEEEEESSSCEEEEEETT---TTEEEEEEECSS---CCC------------CEEEETTEEEEEC-SSSEEEEE--
T ss_pred EEeCCEEEEEEccCCEEEEEECC---cCcEEEEEeCCC---cee------------EEecCCCEEEEEC-CCCEEEEE--
Confidence 45688999999999999999753 567777777643 344 2447899999999 68888877
Q ss_pred cCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCcccccccccc
Q 027522 88 EDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPEL 167 (222)
Q Consensus 88 ~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q~yp~~ 167 (222)
|+.+.+.+++|.++.. |+. ...++.+... +| +|||++
T Consensus 161 -Dp~T~~v~~~I~V~~~-------------------------g~~-v~~lNeLe~~-dG-~lyanv-------------- 197 (268)
T 3nok_A 161 -EPDGFALVGAVQVKLR-------------------------GQP-VELINELECA-NG-VIYANI-------------- 197 (268)
T ss_dssp -CTTTCCEEEEEECEET-------------------------TEE-CCCEEEEEEE-TT-EEEEEE--------------
T ss_pred -cCCCCeEEEEEEeCCC-------------------------Ccc-cccccccEEe-CC-EEEEEE--------------
Confidence 5677888888887321 111 1124555555 66 799777
Q ss_pred ccCCcEEEEEEeeCCCCCe
Q 027522 168 KEKGSHMLQIDVNSEKGGM 186 (222)
Q Consensus 168 ~s~~~~i~~~dvd~~~G~l 186 (222)
..+..|.+| |+.||+.
T Consensus 198 -w~s~~I~vI--Dp~TG~V 213 (268)
T 3nok_A 198 -WHSSDVLEI--DPATGTV 213 (268)
T ss_dssp -TTCSEEEEE--CTTTCBE
T ss_pred -CCCCeEEEE--eCCCCcE
Confidence 245688888 7899986
No 62
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.55 E-value=8.9e-07 Score=78.30 Aligned_cols=113 Identities=15% Similarity=0.202 Sum_probs=81.0
Q ss_pred cCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEe
Q 027522 8 DPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNI 87 (222)
Q Consensus 8 hP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~vf~i 87 (222)
.+.++.+|+++.-++.++++..+ +++.+..+..++ +|| .+++||+.||+|+ +.+.|.++
T Consensus 93 t~~g~~ly~ltw~~~~v~v~D~~---t~~~~~ti~~~~---eG~------------glt~dg~~L~~Sd-Gs~~i~~i-- 151 (262)
T 3nol_A 93 SDWKDKIVGLTWKNGLGFVWNIR---NLRQVRSFNYDG---EGW------------GLTHNDQYLIMSD-GTPVLRFL-- 151 (262)
T ss_dssp EEETTEEEEEESSSSEEEEEETT---TCCEEEEEECSS---CCC------------CEEECSSCEEECC-SSSEEEEE--
T ss_pred EEeCCEEEEEEeeCCEEEEEECc---cCcEEEEEECCC---Cce------------EEecCCCEEEEEC-CCCeEEEE--
Confidence 44688999999999999999763 466677777653 444 3557999999999 57888877
Q ss_pred cCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCcccccccccc
Q 027522 88 EDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPEL 167 (222)
Q Consensus 88 ~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q~yp~~ 167 (222)
|+.+.+.+++|.++. .|+. ...++.+... +| +|||++
T Consensus 152 -Dp~T~~v~~~I~V~~-------------------------~g~~-~~~lNELe~~-~G-~lyan~-------------- 188 (262)
T 3nol_A 152 -DPESLTPVRTITVTA-------------------------HGEE-LPELNELEWV-DG-EIFANV-------------- 188 (262)
T ss_dssp -CTTTCSEEEEEECEE-------------------------TTEE-CCCEEEEEEE-TT-EEEEEE--------------
T ss_pred -cCCCCeEEEEEEecc-------------------------CCcc-ccccceeEEE-CC-EEEEEE--------------
Confidence 667788888888741 1222 2235556665 66 799887
Q ss_pred ccCCcEEEEEEeeCCCCCee
Q 027522 168 KEKGSHMLQIDVNSEKGGMA 187 (222)
Q Consensus 168 ~s~~~~i~~~dvd~~~G~l~ 187 (222)
..+..|.+| |+.||+..
T Consensus 189 -w~~~~I~vI--Dp~tG~V~ 205 (262)
T 3nol_A 189 -WQTNKIVRI--DPETGKVT 205 (262)
T ss_dssp -TTSSEEEEE--CTTTCBEE
T ss_pred -ccCCeEEEE--ECCCCcEE
Confidence 245678888 78999863
No 63
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.55 E-value=1.2e-06 Score=80.02 Aligned_cols=139 Identities=12% Similarity=0.076 Sum_probs=83.1
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCC-CCCeeEEEEEEec--Ccccc-cccCCCCCCcee-EEEEcC-------CCCEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQ-DGSWNHEVAISVK--SLKVQ-NWILPEMPGLIT-DFLISL-------DDRFL 72 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~-~g~~~~~q~is~~--p~~~~-g~~~~~~~~~~a-dI~iSp-------DgrfL 72 (222)
++|+|+|+++||..+.++.|.++.++. .+.+...+++.-. ...+. |......-+.+. .|.+.. +...|
T Consensus 275 ia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~l 354 (430)
T 3tc9_A 275 IQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDF 354 (430)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEE
T ss_pred EEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeE
Confidence 799999999999999999999998863 3555444444321 11111 100000013355 566654 24589
Q ss_pred EEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCc-c---cCCCCeeEEECCCCCE
Q 027522 73 YFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGH-R---LRGGPQMIQLSLDGKR 148 (222)
Q Consensus 73 YvSnRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~-~---~~ggPr~~~lspdGk~ 148 (222)
||++++++.|++|+ + .+++....-. |.. .......|. . --..|+.++++|++.+
T Consensus 355 yvaD~~n~~I~~i~---~-~G~v~~~~g~-g~~-----------------~~~G~~dG~~~~~~~~~~P~giavd~~~g~ 412 (430)
T 3tc9_A 355 YFCDRENHCIRILT---P-QGRVTTFAGR-GSN-----------------GTSGYNDGDLRQEARFNHPEGIVYDEEREC 412 (430)
T ss_dssp EEEEGGGTEEEEEC---T-TSEEEEEEEC-CTT-----------------SSSSCBCEETTTTCBCSSEEEEEEETTTTE
T ss_pred EEEECCCcEEEEEC---C-CCcEEEEEeC-CCC-----------------CCCcccCCCchhhcEeCCCcEEEEECCCCE
Confidence 99999999998875 2 2444211111 000 000000010 0 0013999999998889
Q ss_pred EEEEeCCCCccccccccccccCCcEEEEEEee
Q 027522 149 LYVTNSLFSAWDCQFYPELKEKGSHMLQIDVN 180 (222)
Q Consensus 149 LyvaNsl~~~wd~Q~yp~~~s~~~~i~~~dvd 180 (222)
||||+ +.+..|.+++.+
T Consensus 413 lyVaD---------------~~n~rIr~i~~e 429 (430)
T 3tc9_A 413 FFIGD---------------RENRRIRKIGYE 429 (430)
T ss_dssp EEEEE---------------GGGTEEEEEEEC
T ss_pred EEEEE---------------CCCCeEEEEccC
Confidence 99999 468888888764
No 64
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.53 E-value=2.2e-06 Score=74.42 Aligned_cols=101 Identities=15% Similarity=0.175 Sum_probs=70.8
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCC-CcEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH-GDIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh-~sI~ 83 (222)
+++++.++.+|+......+|.++..+ |+.. ...+. .. - ..+.+|+++|++++||+++++. +.|.
T Consensus 82 lavd~~~~~ly~~d~~~~~I~~~~~~--g~~~-~~~~~---~~---~------~~P~~iavdp~~g~ly~~d~~~~~~I~ 146 (316)
T 1ijq_A 82 LAVDWIHSNIYWTDSVLGTVSVADTK--GVKR-KTLFR---EN---G------SKPRAIVVDPVHGFMYWTDWGTPAKIK 146 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETT--SSSE-EEEEE---CT---T------CCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred EEEeecCCeEEEEECCCCEEEEEeCC--CCce-EEEEE---CC---C------CCcceEEeCCCCCEEEEEccCCCCeEE
Confidence 57788889999999999999998764 4321 11111 11 1 3568999999999999999986 7888
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeC
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNS 154 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNs 154 (222)
+++.+ ++... .+-.. +... |+-+++++++++||+|++
T Consensus 147 ~~~~d--G~~~~--~~~~~--------------------------~~~~----P~gla~d~~~~~lY~~D~ 183 (316)
T 1ijq_A 147 KGGLN--GVDIY--SLVTE--------------------------NIQW----PNGITLDLLSGRLYWVDS 183 (316)
T ss_dssp EEETT--SCCEE--EEECS--------------------------SCSC----EEEEEEETTTTEEEEEET
T ss_pred EEcCC--CCCeE--EEEEC--------------------------CCCC----ceEEEEeccCCEEEEEEC
Confidence 88763 22211 11110 1223 999999999999999994
No 65
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.53 E-value=9.7e-07 Score=79.77 Aligned_cols=130 Identities=15% Similarity=0.178 Sum_probs=79.6
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCcee-EEEEcCCCCEEEEEeCCCCcEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLIT-DFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~a-dI~iSpDgrfLYvSnRgh~sI~ 83 (222)
++++|+..++|+ +..+.+|.++..+ .+.....+ .+......++ .+. +|+++|++.+||++++..+.|.
T Consensus 224 iav~p~~g~lyv-~d~~~~I~~~d~~-~~~~~~~~--~~~~~g~~~~-------~P~~~ia~~p~~g~lyv~d~~~~~I~ 292 (409)
T 3hrp_A 224 VALDETEEWLYF-VDSNKNFGRFNVK-TQEVTLIK--QLELSGSLGT-------NPGPYLIYYFVDSNFYMSDQNLSSVY 292 (409)
T ss_dssp CEECTTSSEEEE-ECTTCEEEEEETT-TCCEEEEE--ECCCCSCCCC-------SSCCEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEeCCCCeEEE-EECCCcEEEEECC-CCCEEEEe--cccccCCCCC-------CccccEEEeCCCCEEEEEeCCCCEEE
Confidence 578998888999 6668889998764 33332221 1111111111 124 9999999999999999999999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCc---ccCCCCeeEEECCCCCEEEEEeCCCCccc
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGH---RLRGGPQMIQLSLDGKRLYVTNSLFSAWD 160 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~---~~~ggPr~~~lspdGk~LyvaNsl~~~wd 160 (222)
+|+.+ +++. +..|.. . .+.. ..|. .--..|+.++++++|+ ||||+
T Consensus 293 ~~~~~----g~~~--~~~g~~-~---------------~~g~--~dg~~~~~~~~~P~gia~d~dG~-lyvad------- 340 (409)
T 3hrp_A 293 KITPD----GECE--WFCGSA-T---------------QKTV--QDGLREEALFAQPNGMTVDEDGN-FYIVD------- 340 (409)
T ss_dssp EECTT----CCEE--EEEECT-T---------------CCSC--BCEEGGGCBCSSEEEEEECTTCC-EEEEE-------
T ss_pred EEecC----CCEE--EEEeCC-C---------------CCCc--CCCcccccEeCCCeEEEEeCCCC-EEEEe-------
Confidence 88652 2221 111100 0 0000 0000 0012499999999998 99999
Q ss_pred ccccccccc-CCcEEEEEEeeCCCCCee
Q 027522 161 CQFYPELKE-KGSHMLQIDVNSEKGGMA 187 (222)
Q Consensus 161 ~Q~yp~~~s-~~~~i~~~dvd~~~G~l~ 187 (222)
+ .+..|.++|. .+|.++
T Consensus 341 --------~~~~~~I~~~~~--~~G~v~ 358 (409)
T 3hrp_A 341 --------GFKGYCLRKLDI--LDGYVS 358 (409)
T ss_dssp --------TTTTCEEEEEET--TTTEEE
T ss_pred --------CCCCCEEEEEEC--CCCEEE
Confidence 5 5788888854 567764
No 66
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.51 E-value=4.5e-06 Score=73.99 Aligned_cols=139 Identities=10% Similarity=0.015 Sum_probs=83.3
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecC-------------cccccccCCCCCCceeEEEEcCCCC
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKS-------------LKVQNWILPEMPGLITDFLISLDDR 70 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p-------------~~~~g~~~~~~~~~~adI~iSpDgr 70 (222)
.++|+ +++++++.+ .+++|.+|... +|+. .+.+.... ..+............+.|..+||++
T Consensus 246 ~~~~s-d~~~l~s~~-~d~~v~vwd~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~ 320 (450)
T 2vdu_B 246 SICCG-KDYLLLSAG-GDDKIFAWDWK-TGKN--LSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLP 320 (450)
T ss_dssp EEEEC-STTEEEEEE-SSSEEEEEETT-TCCE--EEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSS
T ss_pred EEEEC-CCCEEEEEe-CCCeEEEEECC-CCcE--eeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCC
Confidence 46788 999998887 58899999874 3433 33333210 0000000001124578999999999
Q ss_pred EEEEEeCCCCcEEEEEecCC--CCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCE
Q 027522 71 FLYFSNWLHGDIRQYNIEDP--KNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKR 148 (222)
Q Consensus 71 fLYvSnRgh~sI~vf~i~d~--~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~ 148 (222)
+||++++.++.|.+|++.+. ...+++..+... +.++.|+++|++.+
T Consensus 321 ~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~--------------------------------~~v~~~~~~~~~~~ 368 (450)
T 2vdu_B 321 FVAFFVEATKCIIILEMSEKQKGDLALKQIITFP--------------------------------YNVISLSAHNDEFQ 368 (450)
T ss_dssp EEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS--------------------------------SCEEEEEEETTEEE
T ss_pred EEEEEECCCCeEEEEEeccCCCCceeeccEeccC--------------------------------CceEEEEecCCcEE
Confidence 99999999999999999322 222444444321 23889999996433
Q ss_pred EEEEeCCCCccccccccccccCCcEEEEEEeeCCCCCeeec
Q 027522 149 LYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAIN 189 (222)
Q Consensus 149 LyvaNsl~~~wd~Q~yp~~~s~~~~i~~~dvd~~~G~l~~~ 189 (222)
+.++| +.-|..-++...++.+ +.++|.++++
T Consensus 369 v~~~~--------~~~~~~~~~~i~v~~~--~~~~~~~~~~ 399 (450)
T 2vdu_B 369 VTLDN--------KESSGVQKNFAKFIEY--NLNENSFVVN 399 (450)
T ss_dssp EEECC--------TTCCSSCCCSEEEEEE--ETTTTEEEEC
T ss_pred EEEec--------ccCCCCCCcceEEEEE--EcCCCeEEEc
Confidence 33333 4322222334577766 5578877654
No 67
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.50 E-value=1.2e-06 Score=77.89 Aligned_cols=132 Identities=13% Similarity=0.129 Sum_probs=77.8
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCC---CCEEEEEeCCC--
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLD---DRFLYFSNWLH-- 79 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpD---grfLYvSnRgh-- 79 (222)
++|+|+|+ +|| +|..+.|.++. +|+.+. +..++ ....+. ..+..|+++|| +++|||++...
T Consensus 36 ia~~pdG~-l~V-~e~~g~I~~i~---~g~~~~--~~~~~-v~~~g~------~~p~gia~~pdf~~~g~lYv~~~~~~~ 101 (352)
T 2ism_A 36 LAFLPDGG-MLI-AERPGRIRLFR---EGRLST--YAELS-VYHRGE------SGLLGLALHPRFPQEPYVYAYRTVAEG 101 (352)
T ss_dssp EEECTTSC-EEE-EETTTEEEEEE---TTEEEE--EEECC-CCCSTT------CSEEEEEECTTTTTSCEEEEEEEECTT
T ss_pred EEEcCCCe-EEE-EeCCCeEEEEE---CCCccE--eecce-EeecCC------CCceeEEECCCCCCCCEEEEEEecCCC
Confidence 68999998 555 46789999997 354332 22332 112222 45799999999 99999999864
Q ss_pred ---CcEEEEEecCCCCCeEEE-EEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCC
Q 027522 80 ---GDIRQYNIEDPKNPVLTG-QIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSL 155 (222)
Q Consensus 80 ---~sI~vf~i~d~~~~~L~~-~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl 155 (222)
+.|..|+.++ .++.. ++-..+ + |.. .-... .|+.++++||| +|||++.-
T Consensus 102 ~~~~~v~r~~~~~---~~~~~~~~l~~~-~-----------------p~~-~~~~h----~~~~l~~~pdG-~Lyv~~G~ 154 (352)
T 2ism_A 102 GLRNQVVRLRHLG---ERGVLDRVVLDG-I-----------------PAR-PHGLH----SGGRIAFGPDG-MLYVTTGE 154 (352)
T ss_dssp SSEEEEEEEEECS---SCEEEEEEEEEE-E-----------------CCC-TTCCC----CCCCEEECTTS-CEEEECCC
T ss_pred CCccEEEEEEeCC---CCcCceEEEEEe-C-----------------CCC-CCCCc----CCceEEECCCC-CEEEEECC
Confidence 6788888753 22321 111100 0 100 00122 38899999999 69999731
Q ss_pred CCc-cccccccccccCCcEEEEEEee
Q 027522 156 FSA-WDCQFYPELKEKGSHMLQIDVN 180 (222)
Q Consensus 156 ~~~-wd~Q~yp~~~s~~~~i~~~dvd 180 (222)
... -..|+ ..+....|+|+|.|
T Consensus 155 ~~~~~~~~d---~~~~~g~I~ri~~d 177 (352)
T 2ism_A 155 VYERELAQD---LASLGGKILRLTPE 177 (352)
T ss_dssp TTCGGGGGC---TTCSSSEEEEECTT
T ss_pred CCCCccccC---CCCCceEEEEEcCC
Confidence 111 01121 11235789998665
No 68
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.48 E-value=2.4e-06 Score=72.88 Aligned_cols=115 Identities=10% Similarity=0.078 Sum_probs=67.9
Q ss_pred CeEEEEeccCceEEEEEeCCCCCeeEEEEEEecC--cccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 027522 12 DIGFVGCALASTMVRFSKTQDGSWNHEVAISVKS--LKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 89 (222)
Q Consensus 12 ~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p--~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~vf~i~d 89 (222)
..+|+..+-...|+++..+ .++.+......... ....+. ..+..| |+||++|||+++..+.|.+|+++.
T Consensus 128 ~~~~v~d~~~g~i~~~d~~-~~~~~v~~~~~~~~~~~~~~~~------~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 128 TQYLTADSYRGAIWLIDVV-QPSGSIWLEHPMLARSNSESVF------PAANGL--KRFGNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp SEEEEEETTTTEEEEEETT-TTEEEEEEECGGGSCSSTTCCS------CSEEEE--EEETTEEEEEETTTTEEEEEEBCT
T ss_pred CcEEEEECCCCeEEEEeCC-CCcEeEEEECCccccccccCCC------CcCCCc--CcCCCEEEEEeCCCCEEEEEEeCC
Confidence 3578877767778887643 22211111000000 000111 234555 999999999999999999999953
Q ss_pred CCCCeEE-EEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCccccccccccc
Q 027522 90 PKNPVLT-GQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELK 168 (222)
Q Consensus 90 ~~~~~L~-~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q~yp~~~ 168 (222)
. +++. .++.. .+. .|+.|+++++|+ ||||| .
T Consensus 199 ~--g~~~~~~~~~---------------------------~~~----~P~gi~vd~dG~-l~va~--------~------ 230 (306)
T 2p4o_A 199 T--DKPGEPEIFV---------------------------EQT----NIDDFAFDVEGN-LYGAT--------H------ 230 (306)
T ss_dssp T--SCBCCCEEEE---------------------------ESC----CCSSEEEBTTCC-EEEEC--------B------
T ss_pred C--CCCCccEEEe---------------------------ccC----CCCCeEECCCCC-EEEEe--------C------
Confidence 2 3220 01111 122 399999999995 89999 3
Q ss_pred cCCcEEEEEEeeCCCCCee
Q 027522 169 EKGSHMLQIDVNSEKGGMA 187 (222)
Q Consensus 169 s~~~~i~~~dvd~~~G~l~ 187 (222)
.+..|.++ |++ |.+.
T Consensus 231 -~~~~V~~~--~~~-G~~~ 245 (306)
T 2p4o_A 231 -IYNSVVRI--APD-RSTT 245 (306)
T ss_dssp -TTCCEEEE--CTT-CCEE
T ss_pred -CCCeEEEE--CCC-CCEE
Confidence 45667777 443 7653
No 69
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.46 E-value=4.3e-06 Score=68.87 Aligned_cols=99 Identities=10% Similarity=0.106 Sum_probs=68.6
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCC-cEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHG-DIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~-sI~ 83 (222)
++++|+|+ +||.+..++.|.+|.. +|+. ...+ .. .+. ...+..|.+++||+ |||++++.+ .|.
T Consensus 169 i~~~~~g~-l~v~~~~~~~i~~~~~--~g~~--~~~~--~~---~g~-----~~~p~~i~~d~~G~-l~v~~~~~~~~i~ 232 (286)
T 1q7f_A 169 VVVNDKQE-IFISDNRAHCVKVFNY--EGQY--LRQI--GG---EGI-----TNYPIGVGINSNGE-ILIADNHNNFNLT 232 (286)
T ss_dssp EEECSSSE-EEEEEGGGTEEEEEET--TCCE--EEEE--SC---TTT-----SCSEEEEEECTTCC-EEEEECSSSCEEE
T ss_pred EEECCCCC-EEEEECCCCEEEEEcC--CCCE--EEEE--cc---CCc-----cCCCcEEEECCCCC-EEEEeCCCCEEEE
Confidence 68899987 8999988999999975 3432 1222 11 110 04568999999995 899998886 999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|+. .++++..+..+.. .. .|+.++++|||+ |||++
T Consensus 233 ~~~~----~g~~~~~~~~~~~-------------------------~~----~~~~i~~~~~g~-l~vs~ 268 (286)
T 1q7f_A 233 IFTQ----DGQLISALESKVK-------------------------HA----QCFDVALMDDGS-VVLAS 268 (286)
T ss_dssp EECT----TSCEEEEEEESSC-------------------------CS----CEEEEEEETTTE-EEEEE
T ss_pred EECC----CCCEEEEEcccCC-------------------------CC----cceeEEECCCCc-EEEEC
Confidence 9963 2445544444211 12 288999999995 99998
No 70
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.45 E-value=2.8e-06 Score=75.18 Aligned_cols=112 Identities=11% Similarity=0.156 Sum_probs=78.7
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCC-CcEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH-GDIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh-~sI~ 83 (222)
+++++.+..+|+.......|.++..+ |+.. .++ .... - ..+.+|+++|++++||++.|+. +.|.
T Consensus 121 lavd~~~g~ly~~d~~~~~I~~~~~d--G~~~--~~l--~~~~---l------~~P~~iavdp~~g~ly~td~~~~~~I~ 185 (349)
T 3v64_C 121 LAVDWVHDKLYWTDSGTSRIEVANLD--GAHR--KVL--LWQS---L------EKPRAIALHPMEGTIYWTDWGNTPRIE 185 (349)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETT--SCSC--EEE--ECTT---C------SCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred EEEecCCCeEEEEcCCCCeEEEEcCC--CCce--EEE--EeCC---C------CCcceEEEecCcCeEEEeccCCCCEEE
Confidence 68889999999999999999999764 4331 111 1111 1 4569999999999999999998 8888
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCcccccc
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQF 163 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q~ 163 (222)
+++.+. ...+. .+. .+... |+-++++|++++||+|++
T Consensus 186 r~~~dG-~~~~~----~~~-------------------------~~~~~----PnGla~d~~~~~lY~aD~--------- 222 (349)
T 3v64_C 186 ASSMDG-SGRRI----IAD-------------------------THLFW----PNGLTIDYAGRRMYWVDA--------- 222 (349)
T ss_dssp EEETTS-CSCEE----SCC-------------------------SSCSC----EEEEEEETTTTEEEEEET---------
T ss_pred EEeCCC-CCcEE----EEE-------------------------CCCCC----cceEEEeCCCCEEEEEEC---------
Confidence 887732 11111 110 01223 999999999999999993
Q ss_pred ccccccCCcEEEEEEee
Q 027522 164 YPELKEKGSHMLQIDVN 180 (222)
Q Consensus 164 yp~~~s~~~~i~~~dvd 180 (222)
.+..|.++|.|
T Consensus 223 ------~~~~I~~~~~d 233 (349)
T 3v64_C 223 ------KHHVIERANLD 233 (349)
T ss_dssp ------TTTEEEEEETT
T ss_pred ------CCCEEEEEeCC
Confidence 45566666654
No 71
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.45 E-value=1.1e-06 Score=78.86 Aligned_cols=101 Identities=12% Similarity=0.146 Sum_probs=71.2
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCC-CcEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH-GDIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh-~sI~ 83 (222)
+++++.+..+|+.......|.++..+ |+.. .++ .... - ..+.+|+++|++++||++.|+. +.|.
T Consensus 164 lavd~~~g~lY~~d~~~~~I~~~~~d--g~~~--~~l--~~~~---l------~~P~giavdp~~g~ly~td~~~~~~I~ 228 (386)
T 3v65_B 164 LAVDWVHDKLYWTDSGTSRIEVANLD--GAHR--KVL--LWQS---L------EKPRAIALHPMEGTIYWTDWGNTPRIE 228 (386)
T ss_dssp EEEETTTTEEEEEETTTTEEEECBTT--SCSC--EEE--ECSS---C------SCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred EEEEeCCCeEEEEcCCCCeEEEEeCC--CCce--EEe--ecCC---C------CCCcEEEEEcCCCeEEEeccCCCCEEE
Confidence 67888899999999988889888654 4331 111 1111 1 4569999999999999999988 8888
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeC
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNS 154 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNs 154 (222)
+++.+. ...+. +-.. +... |+-++++|++++||+|++
T Consensus 229 r~~~dG-~~~~~---~~~~--------------------------~~~~----PnGlavd~~~~~lY~aD~ 265 (386)
T 3v65_B 229 ASSMDG-SGRRI---IADT--------------------------HLFW----PNGLTIDYAGRRMYWVDA 265 (386)
T ss_dssp EEETTS-CSCEE---EECS--------------------------SCSC----EEEEEEEGGGTEEEEEET
T ss_pred EEeCCC-CCcEE---EEEC--------------------------CCCC----eeeEEEeCCCCEEEEEEC
Confidence 887632 11111 1110 1123 999999999999999993
No 72
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.42 E-value=3.7e-06 Score=69.27 Aligned_cols=99 Identities=12% Similarity=0.145 Sum_probs=67.3
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++++|+|+ +||.+.-+..|.+|.. +|+. ...+... . .. ..+..|.+++||+ |||++...+.|.+
T Consensus 126 i~~~~~g~-l~v~~~~~~~i~~~~~--~g~~--~~~~~~~-~---~~------~~p~~i~~~~~g~-l~v~~~~~~~i~~ 189 (286)
T 1q7f_A 126 VTVDNKGR-IIVVECKVMRVIIFDQ--NGNV--LHKFGCS-K---HL------EFPNGVVVNDKQE-IFISDNRAHCVKV 189 (286)
T ss_dssp EEECTTSC-EEEEETTTTEEEEECT--TSCE--EEEEECT-T---TC------SSEEEEEECSSSE-EEEEEGGGTEEEE
T ss_pred EEEeCCCC-EEEEECCCCEEEEEcC--CCCE--EEEeCCC-C---cc------CCcEEEEECCCCC-EEEEECCCCEEEE
Confidence 67899986 8888887888988864 4433 2222211 1 11 3468999999998 9999999999999
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
|+.+ ++.+..+... |. ...|+.++++++|+ |||++
T Consensus 190 ~~~~----g~~~~~~~~~---------------------------g~--~~~p~~i~~d~~G~-l~v~~ 224 (286)
T 1q7f_A 190 FNYE----GQYLRQIGGE---------------------------GI--TNYPIGVGINSNGE-ILIAD 224 (286)
T ss_dssp EETT----CCEEEEESCT---------------------------TT--SCSEEEEEECTTCC-EEEEE
T ss_pred EcCC----CCEEEEEccC---------------------------Cc--cCCCcEEEECCCCC-EEEEe
Confidence 9752 3333222211 10 01399999999995 88888
No 73
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.41 E-value=1.6e-05 Score=70.49 Aligned_cols=66 Identities=9% Similarity=0.108 Sum_probs=47.3
Q ss_pred ceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCe
Q 027522 59 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 138 (222)
Q Consensus 59 ~~adI~iSpDgrfLYvSnRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr 138 (222)
....|.+||||++|++++-..+.|.+|++.. ..++.+..+...+ .+. .+.
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~-~~~~~~~~~~~~~-------------------------~~~----~v~ 153 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDK-TSKNVLKLRKRFC-------------------------FSK----RPN 153 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECS-SSSSCEEEEEEEE-------------------------CSS----CEE
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcC-CCCceeeeeeccc-------------------------CCC----Cce
Confidence 4789999999999988887789999999952 1233332332100 012 278
Q ss_pred eEEECCCCCEEEEEeC
Q 027522 139 MIQLSLDGKRLYVTNS 154 (222)
Q Consensus 139 ~~~lspdGk~LyvaNs 154 (222)
.++++|||++|++++.
T Consensus 154 ~~~~sp~~~~l~~~~~ 169 (450)
T 2vdu_B 154 AISIAEDDTTVIIADK 169 (450)
T ss_dssp EEEECTTSSEEEEEET
T ss_pred EEEEcCCCCEEEEEeC
Confidence 9999999999999963
No 74
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.40 E-value=1.1e-05 Score=73.51 Aligned_cols=126 Identities=16% Similarity=0.110 Sum_probs=79.3
Q ss_pred CeEEEEecc--CceEEEEEeCCCC-CeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCC----------
Q 027522 12 DIGFVGCAL--ASTMVRFSKTQDG-SWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWL---------- 78 (222)
Q Consensus 12 ~~aYvv~EL--sstV~~~~~d~~g-~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRg---------- 78 (222)
.++||+|-- .++|-+|..+.++ .......+ ....+ +.+-|+.+.+||+ +|++|..
T Consensus 127 ~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~--~g~~~---------~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~ 194 (355)
T 3sre_A 127 VYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI--RHKLL---------PSVNDIVAVGPEH-FYATNDHYFIDPYLKSW 194 (355)
T ss_dssp EEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE--CCTTC---------SSEEEEEEEETTE-EEEEESCSCSSHHHHHH
T ss_pred EEEEEEECCCCCCeEEEEEEECCCCEEEEEecc--ccCCC---------CCCceEEEeCCCC-EEecCCcEeCCcccccc
Confidence 379999887 6778888776443 33332222 11111 5678999999998 4677652
Q ss_pred -----CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 79 -----HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 79 -----h~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
...=++|.+ ++++.+. +.. +. . .|+-+++||||++||||+
T Consensus 195 e~~~~~~~g~vyr~-d~~~~~~---~~~-~l--------------------------~----~pNGia~spDg~~lYvad 239 (355)
T 3sre_A 195 EMHLGLAWSFVTYY-SPNDVRV---VAE-GF--------------------------D----FANGINISPDGKYVYIAE 239 (355)
T ss_dssp HHHTTCCCEEEEEE-CTTCCEE---EEE-EE--------------------------S----SEEEEEECTTSSEEEEEE
T ss_pred hhhccCCccEEEEE-ECCeEEE---eec-CC--------------------------c----ccCcceECCCCCEEEEEe
Confidence 123456666 3433322 111 11 1 299999999999999999
Q ss_pred CCCCccccccccccccCCcEEEEEEeeCCCCCeeeccceeEecCCCCCC
Q 027522 154 SLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDG 202 (222)
Q Consensus 154 sl~~~wd~Q~yp~~~s~~~~i~~~dvd~~~G~l~~~~~f~vdf~~~~~g 202 (222)
+....|.+++++. +|.++....| ++...|+|
T Consensus 240 ---------------t~~~~I~~~~~~~-~g~l~~~~~~--~~~g~PDG 270 (355)
T 3sre_A 240 ---------------LLAHKIHVYEKHA-NWTLTPLRVL--SFDTLVDN 270 (355)
T ss_dssp ---------------GGGTEEEEEEECT-TSCEEEEEEE--ECSSEEEE
T ss_pred ---------------CCCCeEEEEEECC-CCcEecCEEE--eCCCCCce
Confidence 4567788888874 6777644444 66555555
No 75
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.40 E-value=5.2e-06 Score=72.47 Aligned_cols=133 Identities=12% Similarity=0.088 Sum_probs=90.1
Q ss_pred EEEcCCCCeEEEEeccC--ceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcE
Q 027522 5 FLHDPSKDIGFVGCALA--STMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDI 82 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELs--stV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI 82 (222)
|.|++ ..+|+.+-+. |+|.++..+ +| +..+.+.+++..| +.. |.++++.||+.+|..+.+
T Consensus 26 L~~~~--~~LyestG~~g~S~v~~vD~~-tg--kv~~~~~l~~~~f-----------geG--i~~~~~~ly~ltw~~~~v 87 (243)
T 3mbr_X 26 LFYLR--GHLYESTGETGRSSVRKVDLE-TG--RILQRAEVPPPYF-----------GAG--IVAWRDRLIQLTWRNHEG 87 (243)
T ss_dssp EEEET--TEEEEEECCTTSCEEEEEETT-TC--CEEEEEECCTTCC-----------EEE--EEEETTEEEEEESSSSEE
T ss_pred EEEEC--CEEEEECCCCCCceEEEEECC-CC--CEEEEEeCCCCcc-----------eeE--EEEeCCEEEEEEeeCCEE
Confidence 56776 6899999884 789998764 45 4456666665433 233 344589999999999999
Q ss_pred EEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCccccc
Q 027522 83 RQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQ 162 (222)
Q Consensus 83 ~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q 162 (222)
.+||. .+.+++++++.++. + ..|++||++||++| .
T Consensus 88 ~v~D~---~tl~~~~ti~~~~~--------------------------------G--wglt~dg~~L~vSd--------g 122 (243)
T 3mbr_X 88 FVYDL---ATLTPRARFRYPGE--------------------------------G--WALTSDDSHLYMSD--------G 122 (243)
T ss_dssp EEEET---TTTEEEEEEECSSC--------------------------------C--CEEEECSSCEEEEC--------S
T ss_pred EEEEC---CcCcEEEEEeCCCC--------------------------------c--eEEeeCCCEEEEEC--------C
Confidence 99965 45889988887431 2 47788999999999 2
Q ss_pred cccccccCCcEEEEEEeeCCCCCeeeccceeEecCCCCCCCcceeeeecCCC
Q 027522 163 FYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGG 214 (222)
Q Consensus 163 ~yp~~~s~~~~i~~~dvd~~~G~l~~~~~f~vdf~~~~~g~~~~h~~r~~~g 214 (222)
+..+..+ |++|.++ ...+.|.-++.|-. ..-||-|-+|
T Consensus 123 --------s~~l~~i--Dp~t~~~--~~~I~V~~~g~~~~--~lNeLe~~~G 160 (243)
T 3mbr_X 123 --------TAVIRKL--DPDTLQQ--VGSIKVTAGGRPLD--NLNELEWVNG 160 (243)
T ss_dssp --------SSEEEEE--CTTTCCE--EEEEECEETTEECC--CEEEEEEETT
T ss_pred --------CCeEEEE--eCCCCeE--EEEEEEccCCcccc--cceeeEEeCC
Confidence 5567767 7787654 34445543433333 3345655555
No 76
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.40 E-value=4.5e-06 Score=73.78 Aligned_cols=117 Identities=18% Similarity=0.244 Sum_probs=79.5
Q ss_pred EEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecC--cccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 6 LHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKS--LKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 6 afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p--~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.+.++++++|+.++ +++|.++.- .+++....|.+.. .++ ...-++... || .|||++|..++|+
T Consensus 131 glt~dg~~L~~SdG-s~~i~~iDp---~T~~v~~~I~V~~~g~~~---------~~lNELe~~-~G-~lyan~w~~~~I~ 195 (262)
T 3nol_A 131 GLTHNDQYLIMSDG-TPVLRFLDP---ESLTPVRTITVTAHGEEL---------PELNELEWV-DG-EIFANVWQTNKIV 195 (262)
T ss_dssp CEEECSSCEEECCS-SSEEEEECT---TTCSEEEEEECEETTEEC---------CCEEEEEEE-TT-EEEEEETTSSEEE
T ss_pred EEecCCCEEEEECC-CCeEEEEcC---CCCeEEEEEEeccCCccc---------cccceeEEE-CC-EEEEEEccCCeEE
Confidence 45578999999998 888888753 2466677776642 111 112234433 66 6999999999888
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCccccc
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQ 162 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q 162 (222)
+. |+.+++.++.|.+.|..+.. + ...| .+. .|+-++++|++++||||. +.|++=
T Consensus 196 vI---Dp~tG~V~~~Id~~~L~~~~---------~-~~~~-----~~~----vlNGIA~dp~~~~lfVTG---K~Wp~~ 249 (262)
T 3nol_A 196 RI---DPETGKVTGIIDLNGILAEA---------G-PLPS-----PID----VLNGIAWDKEHHRLFVTG---KLWPKV 249 (262)
T ss_dssp EE---CTTTCBEEEEEECTTGGGGS---------C-SCCS-----SCC----CEEEEEEETTTTEEEEEE---TTCSEE
T ss_pred EE---ECCCCcEEEEEECCcCcccc---------c-cccC-----cCC----ceEEEEEcCCCCEEEEEC---CCCCce
Confidence 77 67789999999987653210 0 0000 122 389999999999999999 455443
No 77
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.37 E-value=4.2e-06 Score=74.45 Aligned_cols=139 Identities=12% Similarity=0.100 Sum_probs=78.6
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEE-ecCcccccccCCCCCCceeEEEEcCC---CCEEEEEeCC-
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAIS-VKSLKVQNWILPEMPGLITDFLISLD---DRFLYFSNWL- 78 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is-~~p~~~~g~~~~~~~~~~adI~iSpD---grfLYvSnRg- 78 (222)
-++|.|+|+++|| +|....|.++.. +|... +.+. ++.....+. ....+|.++|| +++||++...
T Consensus 22 ~i~~~pdG~~l~V-~e~~G~i~~~~~--~g~~~--~~~~~~~~v~~~g~------~g~~gia~~pdf~~~g~lYv~~~~~ 90 (353)
T 2g8s_A 22 ALAFLPDNHGMLI-TLRGGELRHWQA--GKGLS--APLSGVPDVWAHGQ------GGLLDVVLAPDFAQSRRIWLSYSEV 90 (353)
T ss_dssp EEEECSTTCCEEE-EETTTEEEEEET--TTEEC--CCCBSCCCCCCSTT------CSEEEEEECTTHHHHCEEEEEEEEE
T ss_pred EEEEcCCCCEEEE-EeCCceEEEEeC--CCcee--eEecCCcccccCCC------CCceeEEECCCCCCCCEEEEEEeCC
Confidence 4789999998774 567899999863 44332 1111 211111222 34589999998 9999999754
Q ss_pred ------CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEE
Q 027522 79 ------HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVT 152 (222)
Q Consensus 79 ------h~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~Lyva 152 (222)
.+.|..|+.+. ...++.....+ +. ..|.. ..+.| .|+.|+++||| +|||+
T Consensus 91 ~~~g~~~~~v~r~~~~~-~~~~~~~~~~i------------~~-----~~p~~--~~~~h---~~~~l~~~pdG-~Lyv~ 146 (353)
T 2g8s_A 91 GDDGKAGTAVGYGRLSD-DLSKVTDFRTV------------FR-----QMPKL--STGNH---FGGRLVFDGKG-YLFIA 146 (353)
T ss_dssp CSSSCEEEEEEEEEECT-TSSBEEEEEEE------------EE-----CSSCC--BSSSC---CCCCEEECSSS-EEEEE
T ss_pred CCCCCceeEEEEEEECC-CCCCCCceEEE------------EE-----ECCCC--CCCcc---cCccEEECCCC-cEEEE
Confidence 45688888853 33444221100 00 01110 01122 37889999999 89999
Q ss_pred eCCCCc-cccccccccccCCcEEEEEEee
Q 027522 153 NSLFSA-WDCQFYPELKEKGSHMLQIDVN 180 (222)
Q Consensus 153 Nsl~~~-wd~Q~yp~~~s~~~~i~~~dvd 180 (222)
+.--.+ =..|+ ..+....|+|+|.|
T Consensus 147 ~Gd~~~~~~~q~---~~~~~g~I~ri~~d 172 (353)
T 2g8s_A 147 LGENNQRPTAQD---LDKLQGKLVRLTDQ 172 (353)
T ss_dssp ECCTTCGGGGGC---TTSCTTEEEEEETT
T ss_pred ECCCCCCCccCC---CCCCCeEEEEECCC
Confidence 631111 00111 11234678888765
No 78
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.36 E-value=8.8e-06 Score=73.53 Aligned_cols=100 Identities=15% Similarity=0.163 Sum_probs=69.7
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCC-CcEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH-GDIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh-~sI~ 83 (222)
+++++.++.+|+.......|.++..+ |+.. ...+. . +- ..+.+|+++|.+++||++.|+. +.|.
T Consensus 164 lavD~~~~~lY~~d~~~~~I~~~~~~--g~~~-~~l~~---~---~~------~~P~~iavdp~~g~ly~td~~~~~~I~ 228 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDSVLGTVSVADTK--GVKR-KTLFR---E---NG------SKPRAIVVDPVHGFMYWTDWGTPAKIK 228 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTT--TCSE-EEEEE---C---SS------CCEEEEEEETTTTEEEEEECSSSCCEE
T ss_pred EEEEecCCceEEEECCCCeEEEEeCC--CCce-EEEEe---C---CC------CCcceEEEecccCeEEEEeCCCCCEEE
Confidence 67888888999999888889888653 4432 11111 1 11 4569999999999999999984 7888
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+++.+. ...+. +-..+ -.+ |+-+++++++++||+|+
T Consensus 229 ~~~~dG-~~~~~---~~~~~--------------------------l~~----P~glavd~~~~~lY~aD 264 (400)
T 3p5b_L 229 KGGLNG-VDIYS---LVTEN--------------------------IQW----PNGITLDLLSGRLYWVD 264 (400)
T ss_dssp EEETTS-CSCEE---EECSS--------------------------CSC----EEEEEEETTTTEEEEEE
T ss_pred EEeCCC-CccEE---EEECC--------------------------CCc----eEEEEEEeCCCEEEEEE
Confidence 887732 11111 11100 123 99999999999999998
No 79
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.36 E-value=9.7e-06 Score=67.46 Aligned_cols=118 Identities=14% Similarity=0.127 Sum_probs=70.5
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeC--C----
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW--L---- 78 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnR--g---- 78 (222)
++++|+|+ .|+...-...|.+|... +|++... ...... . .. +.+.+|.++|||+ ||+|+. +
T Consensus 74 l~~~~dg~-l~v~~~~~~~i~~~d~~-~g~~~~~--~~~~~~-~-~~------~~~~~i~~d~~G~-l~vtd~~~g~~~~ 140 (296)
T 3e5z_A 74 HCLNKQGH-LIACSHGLRRLERQREP-GGEWESI--ADSFEG-K-KL------NSPNDVCLAPDGS-LWFSDPTYGIDKP 140 (296)
T ss_dssp EEECTTCC-EEEEETTTTEEEEECST-TCCEEEE--ECEETT-E-EC------CCCCCEEECTTSC-EEEEECSHHHHCG
T ss_pred eeECCCCc-EEEEecCCCeEEEEcCC-CCcEEEE--eeccCC-C-CC------CCCCCEEECCCCC-EEEECCccccccc
Confidence 68899998 57777666788888652 5655322 111111 0 01 3457999999998 666532 1
Q ss_pred ---------CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEE
Q 027522 79 ---------HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRL 149 (222)
Q Consensus 79 ---------h~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~L 149 (222)
.+.-.+|.++ +. +++. .+.. + .. .|+.+++||||+.|
T Consensus 141 ~~~~~~~~~~~~~~l~~~~-~~-g~~~-~~~~-~--------------------------~~----~~~gi~~s~dg~~l 186 (296)
T 3e5z_A 141 EEGYGGEMELPGRWVFRLA-PD-GTLS-APIR-D--------------------------RV----KPNGLAFLPSGNLL 186 (296)
T ss_dssp GGSSCCCCCSSSCEEEEEC-TT-SCEE-EEEC-C--------------------------CS----SEEEEEECTTSCEE
T ss_pred cccccccccCCCcEEEEEC-CC-CCEE-Eeec-C--------------------------CC----CCccEEECCCCCEE
Confidence 1123556663 33 3331 1111 0 12 28999999999999
Q ss_pred EEEeCCCCccccccccccccCCcEEEEEEeeCCCCCe
Q 027522 150 YVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM 186 (222)
Q Consensus 150 yvaNsl~~~wd~Q~yp~~~s~~~~i~~~dvd~~~G~l 186 (222)
+++ +.+..|.++|++ .+|.+
T Consensus 187 -v~~---------------~~~~~i~~~~~~-~~g~~ 206 (296)
T 3e5z_A 187 -VSD---------------TGDNATHRYCLN-ARGET 206 (296)
T ss_dssp -EEE---------------TTTTEEEEEEEC-SSSCE
T ss_pred -EEe---------------CCCCeEEEEEEC-CCCcC
Confidence 888 345677777775 35665
No 80
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.36 E-value=8.8e-06 Score=65.89 Aligned_cols=109 Identities=8% Similarity=0.087 Sum_probs=73.3
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++++|+|+ +|+.+.-++.|.++..+ +... ..... .+. ..+..|.+++|| .||+++++.+.|.+
T Consensus 155 i~~~~~g~-l~v~~~~~~~i~~~~~~--~~~~----~~~~~---~~~------~~p~~i~~d~~g-~l~v~~~~~~~v~~ 217 (270)
T 1rwi_B 155 VAVDNSGN-VYVTDTDNNRVVKLEAE--SNNQ----VVLPF---TDI------TAPWGIAVDEAG-TVYVTEHNTNQVVK 217 (270)
T ss_dssp EEECTTCC-EEEEEGGGTEEEEECTT--TCCE----EECCC---SSC------CSEEEEEECTTC-CEEEEETTTSCEEE
T ss_pred EEEeCCCC-EEEEECCCCEEEEEecC--CCce----Eeecc---cCC------CCceEEEECCCC-CEEEEECCCCcEEE
Confidence 68899997 99998888899888653 2211 11111 111 346899999999 89999999999999
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCccccccc
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFY 164 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q~y 164 (222)
|+.+. ... ..+... +.. .|..+++++||+ |||++
T Consensus 218 ~~~~~---~~~-~~~~~~--------------------------~~~----~p~~i~~~~~g~-l~v~~----------- 251 (270)
T 1rwi_B 218 LLAGS---TTS-TVLPFT--------------------------GLN----TPLAVAVDSDRT-VYVAD----------- 251 (270)
T ss_dssp ECTTC---SCC-EECCCC--------------------------SCS----CEEEEEECTTCC-EEEEE-----------
T ss_pred EcCCC---Ccc-eeeccC--------------------------CCC----CceeEEECCCCC-EEEEE-----------
Confidence 96632 111 011110 012 399999999996 99999
Q ss_pred cccccCCcEEEEEEee
Q 027522 165 PELKEKGSHMLQIDVN 180 (222)
Q Consensus 165 p~~~s~~~~i~~~dvd 180 (222)
..+..|..++.+
T Consensus 252 ----~~~~~v~~~~~~ 263 (270)
T 1rwi_B 252 ----RGNDRVVKLTSL 263 (270)
T ss_dssp ----GGGTEEEEECCC
T ss_pred ----CCCCEEEEEcCC
Confidence 346677777553
No 81
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.35 E-value=1.4e-05 Score=67.54 Aligned_cols=102 Identities=17% Similarity=0.187 Sum_probs=61.2
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeC--C----
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW--L---- 78 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnR--g---- 78 (222)
++++|+|+ +|+.......|.++.. +|+++.. .... .+.. -+.+.+|.+++||+ ||++.- |
T Consensus 91 l~~d~dG~-l~v~~~~~~~v~~~~~--~g~~~~~--~~~~----~~~~----~~~~~~i~~d~dG~-l~~td~~~g~~~~ 156 (305)
T 3dr2_A 91 NAVDAQQR-LVHCEHGRRAITRSDA--DGQAHLL--VGRY----AGKR----LNSPNDLIVARDGA-IWFTDPPFGLRKP 156 (305)
T ss_dssp EEECTTSC-EEEEETTTTEEEEECT--TSCEEEE--ECEE----TTEE----CSCCCCEEECTTSC-EEEECCSGGGSCG
T ss_pred eeECCCCC-EEEEECCCCEEEEECC--CCCEEEE--Eecc----CCCc----cCCCCCEEECCCCC-EEEeCcCCCcccc
Confidence 57888887 6776666678888865 3654322 1111 1110 04467999999998 667531 1
Q ss_pred ---------CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEE
Q 027522 79 ---------HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRL 149 (222)
Q Consensus 79 ---------h~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~L 149 (222)
.+.-.+|.+ ++.++++.. +. +. .. |+.+++||||++|
T Consensus 157 ~~~~~~~~~~~~~~v~~~-d~~~g~~~~-~~--~~--------------------------~~----p~gl~~spdg~~l 202 (305)
T 3dr2_A 157 SQGCPADPELAHHSVYRL-PPDGSPLQR-MA--DL--------------------------DH----PNGLAFSPDEQTL 202 (305)
T ss_dssp GGSCCCCCSSSCEEEEEE-CSSSCCCEE-EE--EE--------------------------SS----EEEEEECTTSSEE
T ss_pred ccccccccccCCCeEEEE-cCCCCcEEE-Ee--cC--------------------------CC----CcceEEcCCCCEE
Confidence 123456666 333343321 11 11 12 8899999999999
Q ss_pred EEEeC
Q 027522 150 YVTNS 154 (222)
Q Consensus 150 yvaNs 154 (222)
||+++
T Consensus 203 yv~~~ 207 (305)
T 3dr2_A 203 YVSQT 207 (305)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 99983
No 82
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.34 E-value=4.4e-06 Score=74.22 Aligned_cols=132 Identities=14% Similarity=0.126 Sum_probs=88.1
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
|.|+ ++.+|+.+-+..+|.++.. ++|+. ++.+ +++..| +.. |+++|+.||+++|..+.+.+
T Consensus 60 L~~~--~~~Ly~stG~~g~v~~iD~-~Tgkv--~~~~-l~~~~F-----------geG--it~~g~~Ly~ltw~~~~v~V 120 (268)
T 3nok_A 60 LVFH--QGHFFESTGHQGTLRQLSL-ESAQP--VWME-RLGNIF-----------AEG--LASDGERLYQLTWTEGLLFT 120 (268)
T ss_dssp EEEE--TTEEEEEETTTTEEEECCS-SCSSC--SEEE-ECTTCC-----------EEE--EEECSSCEEEEESSSCEEEE
T ss_pred EEEE--CCEEEEEcCCCCEEEEEEC-CCCcE--EeEE-CCCCcc-----------eeE--EEEeCCEEEEEEccCCEEEE
Confidence 3455 5799999999989777755 34544 3444 554333 223 45578999999999999999
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCccccccc
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFY 164 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q~y 164 (222)
||. .+.++++++..++ .-..|++||++||++|
T Consensus 121 ~D~---~Tl~~~~ti~~~~----------------------------------eGwGLt~Dg~~L~vSd----------- 152 (268)
T 3nok_A 121 WSG---MPPQRERTTRYSG----------------------------------EGWGLCYWNGKLVRSD----------- 152 (268)
T ss_dssp EET---TTTEEEEEEECSS----------------------------------CCCCEEEETTEEEEEC-----------
T ss_pred EEC---CcCcEEEEEeCCC----------------------------------ceeEEecCCCEEEEEC-----------
Confidence 965 4588988888732 1247778999999999
Q ss_pred cccccCCcEEEEEEeeCCCCCeeeccceeEecCCCCCCCcceeeeecCCC
Q 027522 165 PELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGG 214 (222)
Q Consensus 165 p~~~s~~~~i~~~dvd~~~G~l~~~~~f~vdf~~~~~g~~~~h~~r~~~g 214 (222)
.+..+..+ |++|++. ...+.|.-+..+-. ..-||-|-+|
T Consensus 153 -----Gs~~l~~i--Dp~T~~v--~~~I~V~~~g~~v~--~lNeLe~~dG 191 (268)
T 3nok_A 153 -----GGTMLTFH--EPDGFAL--VGAVQVKLRGQPVE--LINELECANG 191 (268)
T ss_dssp -----SSSEEEEE--CTTTCCE--EEEEECEETTEECC--CEEEEEEETT
T ss_pred -----CCCEEEEE--cCCCCeE--EEEEEeCCCCcccc--cccccEEeCC
Confidence 25567767 6787754 44455544433322 3345555554
No 83
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.33 E-value=7e-06 Score=71.66 Aligned_cols=111 Identities=17% Similarity=0.195 Sum_probs=77.8
Q ss_pred CCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEec
Q 027522 9 PSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIE 88 (222)
Q Consensus 9 P~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~vf~i~ 88 (222)
+.++.+|+++--+++++++..+ +++.+.+++.+. +|| .|++|++.||+|| +.+.|.++
T Consensus 72 ~~~~~ly~ltw~~~~v~v~D~~---tl~~~~ti~~~~---~Gw------------glt~dg~~L~vSd-gs~~l~~i--- 129 (243)
T 3mbr_X 72 AWRDRLIQLTWRNHEGFVYDLA---TLTPRARFRYPG---EGW------------ALTSDDSHLYMSD-GTAVIRKL--- 129 (243)
T ss_dssp EETTEEEEEESSSSEEEEEETT---TTEEEEEEECSS---CCC------------EEEECSSCEEEEC-SSSEEEEE---
T ss_pred EeCCEEEEEEeeCCEEEEEECC---cCcEEEEEeCCC---Cce------------EEeeCCCEEEEEC-CCCeEEEE---
Confidence 3478999999999999999753 567777777643 344 3558999999999 58888887
Q ss_pred CCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCccccccccccc
Q 027522 89 DPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELK 168 (222)
Q Consensus 89 d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q~yp~~~ 168 (222)
|+.+.+.+++|.++. .|+. ...++.+.. .+.+|||++
T Consensus 130 Dp~t~~~~~~I~V~~-------------------------~g~~-~~~lNeLe~--~~G~lyanv--------------- 166 (243)
T 3mbr_X 130 DPDTLQQVGSIKVTA-------------------------GGRP-LDNLNELEW--VNGELLANV--------------- 166 (243)
T ss_dssp CTTTCCEEEEEECEE-------------------------TTEE-CCCEEEEEE--ETTEEEEEE---------------
T ss_pred eCCCCeEEEEEEEcc-------------------------CCcc-cccceeeEE--eCCEEEEEE---------------
Confidence 567788888888742 1221 111344443 355699777
Q ss_pred cCCcEEEEEEeeCCCCCe
Q 027522 169 EKGSHMLQIDVNSEKGGM 186 (222)
Q Consensus 169 s~~~~i~~~dvd~~~G~l 186 (222)
-++..|.+| |+.||+.
T Consensus 167 w~s~~I~vI--Dp~tG~V 182 (243)
T 3mbr_X 167 WLTSRIARI--DPASGKV 182 (243)
T ss_dssp TTTTEEEEE--CTTTCBE
T ss_pred CCCCeEEEE--ECCCCCE
Confidence 235578877 7899986
No 84
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.32 E-value=1.3e-05 Score=69.58 Aligned_cols=104 Identities=9% Similarity=0.061 Sum_probs=70.4
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++|++.+..+|+......+|.++..+....-...++ +.+..+ ..+..|++++.++.||+++.+.+.|.+
T Consensus 35 ~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~--~~~~~~---------~~p~glavd~~~~~ly~~d~~~~~I~~ 103 (316)
T 1ijq_A 35 LDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDT--VISRDI---------QAPDGLAVDWIHSNIYWTDSVLGTVSV 103 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEC--------CEE--EECSSC---------SCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEE--EEeCCC---------CCcCEEEEeecCCeEEEEECCCCEEEE
Confidence 689999999999999999999998642100011111 111111 235789999999999999999999999
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
++.+. ...+. .+.. .... |+.++++|++++||+++
T Consensus 104 ~~~~g-~~~~~--~~~~---------------------------~~~~----P~~iavdp~~g~ly~~d 138 (316)
T 1ijq_A 104 ADTKG-VKRKT--LFRE---------------------------NGSK----PRAIVVDPVHGFMYWTD 138 (316)
T ss_dssp EETTS-SSEEE--EEEC---------------------------TTCC----EEEEEEETTTTEEEEEE
T ss_pred EeCCC-CceEE--EEEC---------------------------CCCC----cceEEeCCCCCEEEEEc
Confidence 87732 11111 0111 1233 99999999999999998
No 85
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.31 E-value=5.5e-06 Score=72.92 Aligned_cols=101 Identities=12% Similarity=0.160 Sum_probs=69.8
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCC-CCcEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWL-HGDIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRg-h~sI~ 83 (222)
+++++.+..+|+.......|.++..+ |+.. +++ ... +- ..+.+|.++|++++||++.|+ ...|.
T Consensus 84 lavd~~~g~ly~~d~~~~~I~~~~~d--G~~~--~~l--~~~---~~------~~P~giavdp~~g~ly~td~~~~~~I~ 148 (318)
T 3sov_A 84 LACDWLGEKLYWTDSETNRIEVSNLD--GSLR--KVL--FWQ---EL------DQPRAIALDPSSGFMYWTDWGEVPKIE 148 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETT--SCSC--EEE--ECS---SC------SSEEEEEEEGGGTEEEEEECSSSCEEE
T ss_pred EEEEcCCCeEEEEECCCCEEEEEECC--CCcE--EEE--EeC---CC------CCccEEEEeCCCCEEEEEecCCCCEEE
Confidence 67888888999998888889888764 4322 111 111 11 456999999999999999997 57787
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeC
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNS 154 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNs 154 (222)
+++.+. +.+. .+-.. +-.. |+-+++++++++||+|++
T Consensus 149 r~~~dG--~~~~--~~~~~--------------------------~l~~----Pnglavd~~~~~lY~aD~ 185 (318)
T 3sov_A 149 RAGMDG--SSRF--IIINS--------------------------EIYW----PNGLTLDYEEQKLYWADA 185 (318)
T ss_dssp EEETTS--CSCE--EEECS--------------------------SCSC----EEEEEEETTTTEEEEEET
T ss_pred EEEcCC--CCeE--EEEEC--------------------------CCCC----ccEEEEeccCCEEEEEEC
Confidence 776632 2211 11110 1123 999999999999999994
No 86
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.30 E-value=1.8e-05 Score=70.54 Aligned_cols=132 Identities=14% Similarity=0.145 Sum_probs=76.6
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCC---CCEEEEEeCC---
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLD---DRFLYFSNWL--- 78 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpD---grfLYvSnRg--- 78 (222)
++|+|+|+ +|| +|....|.++. .+|+ + .+..++ -...+. ..+.+|.++|| +++|||++..
T Consensus 34 ia~~pdG~-l~V-~e~~g~I~~~d--~~G~-~--~~~~~~-v~~~g~------~g~~gia~~pdf~~~g~lyv~~~~~~~ 99 (354)
T 3a9g_A 34 IAPLGGGR-YLV-TERPGRLVLIS--PSGK-K--LVASFD-VANVGE------AGLLGLALHPEFPKKSWVYLYASYFAE 99 (354)
T ss_dssp EEEEETTE-EEE-EETTTEEEEEC--SSCE-E--EEEECC-CCCSTT------CSEEEEEECTTTTTSCEEEEEEEEECG
T ss_pred EEEcCCCe-EEE-EeCCCEEEEEe--CCCc-e--Eeeccc-eeecCC------CceeeEEeCCCCCcCCEEEEEEeccCC
Confidence 68999997 555 47779999984 4565 2 222332 111222 45689999999 9999999863
Q ss_pred C----CcEEEEEecCCCCCeEEE-EEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 79 H----GDIRQYNIEDPKNPVLTG-QIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 79 h----~sI~vf~i~d~~~~~L~~-~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
. +.|..|+.+. ...++.. ++-..+ ++. .+.| .|+.|+++|||+ ||++.
T Consensus 100 ~~~~~~~v~r~~~~~-~~~~~~~~~~l~~~-~~~---------------------~~~h---~~~~l~~~pDG~-Lyvt~ 152 (354)
T 3a9g_A 100 GGHIRNRVIRGRLDG-STFKLKEVKTLIDG-IPG---------------------AYIH---NGGRIRFGPDGM-LYITT 152 (354)
T ss_dssp GGCEEEEEEEEEECS-SSCCEEEEEEEEEE-EEC---------------------CSSC---CCCCEEECTTSC-EEEEC
T ss_pred CCCcceEEEEEEECC-CCcCcCccEEEEEc-CCC---------------------CCCc---CCceEEECCCCc-EEEEE
Confidence 3 5788888743 2223321 111100 000 1112 388999999995 99996
Q ss_pred CCCC-ccccccccccccCCcEEEEEEee
Q 027522 154 SLFS-AWDCQFYPELKEKGSHMLQIDVN 180 (222)
Q Consensus 154 sl~~-~wd~Q~yp~~~s~~~~i~~~dvd 180 (222)
.-.. ....|+ ..+....|+|++.|
T Consensus 153 G~~~~~~~~~d---~~~~~G~I~ri~~d 177 (354)
T 3a9g_A 153 GDAADPRLAQD---LSSLAGKILRVDEE 177 (354)
T ss_dssp CCTTCGGGGTC---TTCCSSEEEEECTT
T ss_pred CCCCCCccccC---CCCCCeEEEEEcCC
Confidence 3111 111121 11235678888665
No 87
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.28 E-value=1.1e-05 Score=65.33 Aligned_cols=96 Identities=10% Similarity=0.144 Sum_probs=63.2
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++++|+|+ +||.+. ++.|.++.. ++... . .+.. .+. ..+.+|.+++||+ ||+++.+.+.|.+
T Consensus 72 i~~~~~g~-l~v~~~-~~~i~~~d~--~~~~~--~--~~~~---~~~------~~p~~i~~~~~g~-l~v~~~~~~~i~~ 133 (270)
T 1rwi_B 72 LAVDGAGT-VYVTDF-NNRVVTLAA--GSNNQ--T--VLPF---DGL------NYPEGLAVDTQGA-VYVADRGNNRVVK 133 (270)
T ss_dssp EEECTTCC-EEEEET-TTEEEEECT--TCSCC--E--ECCC---CSC------SSEEEEEECTTCC-EEEEEGGGTEEEE
T ss_pred eEECCCCC-EEEEcC-CCEEEEEeC--CCceE--e--eeec---CCc------CCCcceEECCCCC-EEEEECCCCEEEE
Confidence 67899988 888887 788888754 33321 1 1111 111 3468999999998 9999998888888
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
|+ .++.... .... ..... |+.++++++|+ |||++
T Consensus 134 ~~---~~~~~~~--~~~~-------------------------~~~~~----p~~i~~~~~g~-l~v~~ 167 (270)
T 1rwi_B 134 LA---AGSKTQT--VLPF-------------------------TGLND----PDGVAVDNSGN-VYVTD 167 (270)
T ss_dssp EC---TTCCSCE--ECCC-------------------------CSCCS----CCCEEECTTCC-EEEEE
T ss_pred EE---CCCceeE--eecc-------------------------ccCCC----ceeEEEeCCCC-EEEEE
Confidence 83 2222221 0000 00123 99999999997 99998
No 88
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.27 E-value=2.7e-05 Score=61.94 Aligned_cols=101 Identities=13% Similarity=0.074 Sum_probs=65.8
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCC-CCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQ-DGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~-~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
++|+|+++++++.+.-+.++.++..+. .+.. + .+... +.....+.+||||++|+++....+.+.
T Consensus 134 ~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~---~--~~~~~----------~~~~~~~~~s~dg~~l~~~~~~~~~~~ 198 (297)
T 2ojh_A 134 HGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE---T--RLTHG----------EGRNDGPDYSPDGRWIYFNSSRTGQMQ 198 (297)
T ss_dssp EEECTTSSEEEEEEEETTEEEEEEEETTTCCE---E--ECCCS----------SSCEEEEEECTTSSEEEEEECTTSSCE
T ss_pred eEECCCCCEEEEEECCCCceEEEEEECCCCcc---e--EcccC----------CCccccceECCCCCEEEEEecCCCCcc
Confidence 579999998887776677776666542 2322 1 11111 134588999999999998886677888
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|.++.. ...+ ..+... ... ...+++||||++|+++.
T Consensus 199 i~~~~~~-~~~~-~~~~~~---------------------------~~~----~~~~~~s~dg~~l~~~~ 235 (297)
T 2ojh_A 199 IWRVRVD-GSSV-ERITDS---------------------------AYG----DWFPHPSPSGDKVVFVS 235 (297)
T ss_dssp EEEEETT-SSCE-EECCCC---------------------------SEE----EEEEEECTTSSEEEEEE
T ss_pred EEEECCC-CCCc-EEEecC---------------------------Ccc----cCCeEECCCCCEEEEEE
Confidence 8988522 2222 111110 111 56789999999998886
No 89
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.27 E-value=7.9e-05 Score=62.19 Aligned_cols=103 Identities=7% Similarity=0.084 Sum_probs=71.3
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|+|+++++++.++ +.+|.+|..+ ++++...+.+... . .....|.+|||+++|+++.. .+.|.
T Consensus 13 ~~~~s~~~~~l~~~~~-d~~v~i~~~~-~~~~~~~~~~~~h----~--------~~v~~~~~~~~~~~l~~~~~-dg~i~ 77 (372)
T 1k8k_C 13 CHAWNKDRTQIAICPN-NHEVHIYEKS-GNKWVQVHELKEH----N--------GQVTGVDWAPDSNRIVTCGT-DRNAY 77 (372)
T ss_dssp EEEECTTSSEEEEECS-SSEEEEEEEE-TTEEEEEEEEECC----S--------SCEEEEEEETTTTEEEEEET-TSCEE
T ss_pred EEEECCCCCEEEEEeC-CCEEEEEeCC-CCcEEeeeeecCC----C--------CcccEEEEeCCCCEEEEEcC-CCeEE
Confidence 4689999999888766 7889999774 3444444443311 1 34689999999999988774 67899
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++.. .++.......+ ... ....++++|+|++|+++.
T Consensus 78 vwd~~~---~~~~~~~~~~~-------------------------~~~----~v~~~~~~~~~~~l~~~~ 115 (372)
T 1k8k_C 78 VWTLKG---RTWKPTLVILR-------------------------INR----AARCVRWAPNEKKFAVGS 115 (372)
T ss_dssp EEEEET---TEEEEEEECCC-------------------------CSS----CEEEEEECTTSSEEEEEE
T ss_pred EEECCC---CeeeeeEEeec-------------------------CCC----ceeEEEECCCCCEEEEEe
Confidence 999954 33322222211 011 278899999999999886
No 90
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.26 E-value=1.6e-05 Score=68.84 Aligned_cols=80 Identities=8% Similarity=0.140 Sum_probs=50.1
Q ss_pred EEEcCCCCeEEEEec---cCceEEEEEeCCCCCeeEEEEEE----ecCcc----cccccCC---------CCCCceeEEE
Q 027522 5 FLHDPSKDIGFVGCA---LASTMVRFSKTQDGSWNHEVAIS----VKSLK----VQNWILP---------EMPGLITDFL 64 (222)
Q Consensus 5 ~afhP~g~~aYvv~E---LsstV~~~~~d~~g~~~~~q~is----~~p~~----~~g~~~~---------~~~~~~adI~ 64 (222)
++++|++.++|+..+ .+.+|.++..+ +|+. ..++. +.+.. +.|..+. .....+-.|.
T Consensus 125 v~vd~~~g~~yvtd~~~~~~~~i~v~d~~-~g~~--~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia 201 (343)
T 2qe8_A 125 LAVDLIHNFVYISDPAPDDKAALIRVDLQ-TGLA--ARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIV 201 (343)
T ss_dssp EEEETTTTEEEEEECCSGGGCEEEEEETT-TCCE--EEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEE
T ss_pred EEEecCCCEEEEEcCccCCCCeEEEEECC-CCCE--EEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeE
Confidence 578888889999999 88999999874 3432 22221 00100 0110000 0112356799
Q ss_pred EcCCCCEEEEEeCCCCcEEEEEe
Q 027522 65 ISLDDRFLYFSNWLHGDIRQYNI 87 (222)
Q Consensus 65 iSpDgrfLYvSnRgh~sI~vf~i 87 (222)
+||||++||+++.....|..++.
T Consensus 202 ~s~dg~~ly~~~~~~~~l~~~~~ 224 (343)
T 2qe8_A 202 LDAENEWLYLSPMHSTSMYRIKS 224 (343)
T ss_dssp ECTTSCEEEEEESSCSEEEEEEH
T ss_pred eccCCCEEEEEeCCCCeEEEEEH
Confidence 99999999999987766665554
No 91
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.25 E-value=5.3e-05 Score=65.26 Aligned_cols=115 Identities=11% Similarity=0.167 Sum_probs=66.1
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCC----C
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH----G 80 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh----~ 80 (222)
++++|+|++ |+.++ ..|+++.. .+|+++. ... .+.... .+.+.+|.++|||++ |+++.+. .
T Consensus 95 i~~~~dg~l-~v~~~--~gl~~~d~-~~g~~~~--~~~-~~~~~~-------~~~~~~i~~d~~G~l-~v~~~~~~~~~~ 159 (326)
T 2ghs_A 95 LAKISDSKQ-LIASD--DGLFLRDT-ATGVLTL--HAE-LESDLP-------GNRSNDGRMHPSGAL-WIGTMGRKAETG 159 (326)
T ss_dssp EEEEETTEE-EEEET--TEEEEEET-TTCCEEE--EEC-SSTTCT-------TEEEEEEEECTTSCE-EEEEEETTCCTT
T ss_pred EEEeCCCeE-EEEEC--CCEEEEEC-CCCcEEE--Eee-CCCCCC-------CCCCCCEEECCCCCE-EEEeCCCcCCCC
Confidence 567788764 44443 44776654 2455432 111 111100 135689999999995 6665432 2
Q ss_pred cEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCccc
Q 027522 81 DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWD 160 (222)
Q Consensus 81 sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd 160 (222)
...+|.++ . +++.. +.. + ... |+.+++||||++||+++
T Consensus 160 ~~~l~~~~-~--g~~~~-~~~-~--------------------------~~~----~~~i~~s~dg~~lyv~~------- 197 (326)
T 2ghs_A 160 AGSIYHVA-K--GKVTK-LFA-D--------------------------ISI----PNSICFSPDGTTGYFVD------- 197 (326)
T ss_dssp CEEEEEEE-T--TEEEE-EEE-E--------------------------ESS----EEEEEECTTSCEEEEEE-------
T ss_pred ceEEEEEe-C--CcEEE-eeC-C--------------------------Ccc----cCCeEEcCCCCEEEEEE-------
Confidence 34556664 2 44321 111 0 112 88999999999999998
Q ss_pred cccccccccCCcEEEEEEeeCCCC
Q 027522 161 CQFYPELKEKGSHMLQIDVNSEKG 184 (222)
Q Consensus 161 ~Q~yp~~~s~~~~i~~~dvd~~~G 184 (222)
+.+..|.++|++..+|
T Consensus 198 --------~~~~~I~~~d~~~~~G 213 (326)
T 2ghs_A 198 --------TKVNRLMRVPLDARTG 213 (326)
T ss_dssp --------TTTCEEEEEEBCTTTC
T ss_pred --------CCCCEEEEEEcccccC
Confidence 2356777777765566
No 92
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.24 E-value=3e-05 Score=72.13 Aligned_cols=104 Identities=14% Similarity=0.214 Sum_probs=62.0
Q ss_pred eEEEcCCCCeEEEEec--cCc--eEEEEEeCCCC-CeeEEEEEEecCcccccccCCCCCCceeEEEEcC--CCCEEEEEe
Q 027522 4 RFLHDPSKDIGFVGCA--LAS--TMVRFSKTQDG-SWNHEVAISVKSLKVQNWILPEMPGLITDFLISL--DDRFLYFSN 76 (222)
Q Consensus 4 r~afhP~g~~aYvv~E--Lss--tV~~~~~d~~g-~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSp--DgrfLYvSn 76 (222)
.++|+|+|+++++... ... +|.++.. .+| ... ....-. ...+. .....+.+|| ||++||+++
T Consensus 262 ~~~~spdg~~l~~~~~~~~~~~~~v~~~d~-~~g~~~~--~~~~~~---~~~~~-----~~~~~~~~sp~~dg~~l~~~~ 330 (706)
T 2z3z_A 262 NLSWSPDENILYVAEVNRAQNECKVNAYDA-ETGRFVR--TLFVET---DKHYV-----EPLHPLTFLPGSNNQFIWQSR 330 (706)
T ss_dssp EEEECTTSSEEEEEEECTTSCEEEEEEEET-TTCCEEE--EEEEEE---CSSCC-----CCCSCCEECTTCSSEEEEEEC
T ss_pred eEEEECCCCEEEEEEeCCCCCeeEEEEEEC-CCCceee--EEEEcc---CCCeE-----CccCCceeecCCCCEEEEEEc
Confidence 5789999998888543 333 4555543 234 222 111111 11110 1235789999 999999998
Q ss_pred CCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCe-e-EEECCCCCEEEEEe
Q 027522 77 WLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ-M-IQLSLDGKRLYVTN 153 (222)
Q Consensus 77 Rgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr-~-~~lspdGk~LyvaN 153 (222)
+. +.+.+|.++. . ++.+.++.. |.. +. . +++||||++||+++
T Consensus 331 ~~-g~~~l~~~~~-~-~~~~~~l~~----------------------------~~~----~v~~~~~~spdg~~l~~~~ 374 (706)
T 2z3z_A 331 RD-GWNHLYLYDT-T-GRLIRQVTK----------------------------GEW----EVTNFAGFDPKGTRLYFES 374 (706)
T ss_dssp TT-SSCEEEEEET-T-SCEEEECCC----------------------------SSS----CEEEEEEECTTSSEEEEEE
T ss_pred cC-CccEEEEEEC-C-CCEEEecCC----------------------------CCe----EEEeeeEEcCCCCEEEEEe
Confidence 74 5788888852 2 223222221 222 33 2 79999999999988
No 93
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.23 E-value=1.4e-05 Score=76.05 Aligned_cols=118 Identities=11% Similarity=0.143 Sum_probs=79.9
Q ss_pred eEEEcC-CCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEE-------cCCCCEEEEE
Q 027522 4 RFLHDP-SKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLI-------SLDDRFLYFS 75 (222)
Q Consensus 4 r~afhP-~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~i-------SpDgrfLYvS 75 (222)
.++|+| +...+|+..+-...|.++... ++.++ ..+.... .+. +.+..|.+ ++||++|||+
T Consensus 143 ~la~dp~~~~~Lyv~~~~~~~i~~ID~~-~~~v~--~l~~~~~---~~~------~~p~~ia~~~~~~~~d~~G~~lyva 210 (496)
T 3kya_A 143 RLAFDPLNKDHLYICYDGHKAIQLIDLK-NRMLS--SPLNINT---IPT------NRIRSIAFNKKIEGYADEAEYMIVA 210 (496)
T ss_dssp EEEEETTEEEEEEEEEETEEEEEEEETT-TTEEE--EEECCTT---SSC------SBEEEEEECCCBTTTBCTTCEEEEE
T ss_pred EEEEccCCCCEEEEEECCCCeEEEEECC-CCEEE--EEEccCc---ccc------CCCcEEEEeecccccCCCCCEEEEE
Confidence 689999 699999999987888888753 33332 1222211 111 45799999 9999999999
Q ss_pred eCCCC----cEEEEEecCCCCCeEE-----EEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCC
Q 027522 76 NWLHG----DIRQYNIEDPKNPVLT-----GQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDG 146 (222)
Q Consensus 76 nRgh~----sI~vf~i~d~~~~~L~-----~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdG 146 (222)
++..+ ..+++-++....+++. ..+. .+++ |..++++|++
T Consensus 211 d~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~----------------------------~~~~----p~giavdp~~ 258 (496)
T 3kya_A 211 IDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA----------------------------AYKQ----CNGATIHPIN 258 (496)
T ss_dssp ECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE----------------------------EESC----CCCEEECTTT
T ss_pred eCCCCCcccCceEEEEecCCCCceeecccceeec----------------------------cCCC----ceEEEEcCCC
Confidence 99763 3445555322212221 1111 1345 9999999999
Q ss_pred CEEEEEeCCCCccccccccccccCCcEEEEEEee
Q 027522 147 KRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVN 180 (222)
Q Consensus 147 k~LyvaNsl~~~wd~Q~yp~~~s~~~~i~~~dvd 180 (222)
++||+++ . .+..|+++|.+
T Consensus 259 g~LYvtd--------~-------~~g~V~r~d~~ 277 (496)
T 3kya_A 259 GELYFNS--------Y-------EKGQVFRLDLV 277 (496)
T ss_dssp CCEEEEE--------T-------TTTEEEEECHH
T ss_pred CeEEEEE--------C-------CCCEEEEEecc
Confidence 9999999 3 56789999776
No 94
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.23 E-value=1.7e-05 Score=78.96 Aligned_cols=101 Identities=15% Similarity=0.179 Sum_probs=72.0
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCC-CcEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH-GDIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh-~sI~ 83 (222)
+|+++.++.+|+...-..+|.++..+ |+.. ...+. .. - ..+.+|+|+|.+++||++.|+. ..|.
T Consensus 476 LAvD~~~~~LY~tD~~~~~I~v~~ld--G~~~-~~l~~---~~---l------~~P~gIaVDp~~g~LYwtD~g~~~~I~ 540 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDSVLGTVSVADTK--GVKR-KTLFR---EN---G------SKPRAIVVDPVHGFMYWTDWGTPAKIK 540 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETT--SSSE-EEEEE---CT---T------CCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred eeeeecCCcEEEEecCCCeEEEEeCC--CCeE-EEEEe---CC---C------CCcceEEEecCCCCEEEecCCCCCeEE
Confidence 68888999999999989999999764 4432 11111 11 1 3469999999999999999986 7888
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeC
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNS 154 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNs 154 (222)
+++++. ..+. .+-.. +..+ |+-++|++++++||+|++
T Consensus 541 ~~~~dG--~~~~--~lv~~--------------------------~l~~----P~GLavD~~~~~LYwaD~ 577 (791)
T 3m0c_C 541 KGGLNG--VDIY--SLVTE--------------------------NIQW----PNGITLDLLSGRLYWVDS 577 (791)
T ss_dssp EEETTS--CCEE--EEECS--------------------------SCSC----EEEEEEETTTTEEEEEET
T ss_pred EEecCC--CceE--EEEeC--------------------------CCCC----ceEEEEecCCCeEEEEeC
Confidence 887732 2211 11110 1133 999999999999999983
No 95
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.23 E-value=1.8e-05 Score=63.00 Aligned_cols=99 Identities=13% Similarity=0.038 Sum_probs=62.9
Q ss_pred EEEcCCCCeEEEEecc---CceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCc
Q 027522 5 FLHDPSKDIGFVGCAL---ASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGD 81 (222)
Q Consensus 5 ~afhP~g~~aYvv~EL---sstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~s 81 (222)
++|+|+|+++++...- ...|+.+..+ .+.. +. +... .....+.+||||++|+++....+.
T Consensus 90 ~~~spdg~~l~~~~~~~~~~~~l~~~~~~-~~~~---~~--~~~~-----------~~~~~~~~spdg~~l~~~~~~~~~ 152 (297)
T 2ojh_A 90 HGISPDGALYAISDKVEFGKSAIYLLPST-GGTP---RL--MTKN-----------LPSYWHGWSPDGKSFTYCGIRDQV 152 (297)
T ss_dssp CEECTTSSEEEEEECTTTSSCEEEEEETT-CCCC---EE--CCSS-----------SSEEEEEECTTSSEEEEEEEETTE
T ss_pred eEECCCCCEEEEEEeCCCCcceEEEEECC-CCce---EE--eecC-----------CCccceEECCCCCEEEEEECCCCc
Confidence 6899999998888743 3445555432 2321 11 1110 124778999999999977767788
Q ss_pred EEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 82 IRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 82 I~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+.+|.++. ...+.. .+.. ... .++.++++|||++|+++.
T Consensus 153 ~~l~~~~~-~~~~~~-~~~~---------------------------~~~----~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 153 FDIYSMDI-DSGVET-RLTH---------------------------GEG----RNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp EEEEEEET-TTCCEE-ECCC---------------------------SSS----CEEEEEECTTSSEEEEEE
T ss_pred eEEEEEEC-CCCcce-Eccc---------------------------CCC----ccccceECCCCCEEEEEe
Confidence 89998843 223331 1110 011 278899999999999876
No 96
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.21 E-value=2.8e-05 Score=64.16 Aligned_cols=29 Identities=10% Similarity=0.074 Sum_probs=26.2
Q ss_pred eeEEEEc----CCCCEEEEEeCCCCcEEEEEec
Q 027522 60 ITDFLIS----LDDRFLYFSNWLHGDIRQYNIE 88 (222)
Q Consensus 60 ~adI~iS----pDgrfLYvSnRgh~sI~vf~i~ 88 (222)
+..|.++ +||++||+++...+.|.+|+++
T Consensus 174 ~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~ 206 (314)
T 1pjx_A 174 PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK 206 (314)
T ss_dssp EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE
T ss_pred cceEEEecccCCCCCEEEEEECCCCeEEEEECC
Confidence 4788999 9999999999988999999985
No 97
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.18 E-value=3.8e-06 Score=81.74 Aligned_cols=101 Identities=15% Similarity=0.150 Sum_probs=69.4
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCC-CcEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH-GDIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh-~sI~ 83 (222)
+++++.+..+|+......+|.++..+ |+.. .+ +.... . ..+.+|+++|++++||++.++. +.|.
T Consensus 458 lavD~~~g~LY~tD~~~~~I~v~d~d--g~~~--~~--l~~~~---~------~~P~giavDp~~g~ly~td~~~~~~I~ 522 (699)
T 1n7d_A 458 LAVDWIHSNIYWTDSVLGTVSVADTK--GVKR--KT--LFREQ---G------SKPRAIVVDPVHGFMYWTDWGTPAKIK 522 (699)
T ss_dssp EECCCSSSBCEECCTTTSCEEEEBSS--SCCE--EE--ECCCS---S------CCCCCEECCSSSSCCEECCCSSSCCEE
T ss_pred EEEEeeCCcEEEEeccCCeEEEEecC--CCce--EE--EEeCC---C------CCcceEEEccCCCcEEEcccCCCCeEE
Confidence 57777888999999989999888754 4321 11 11111 1 3358899999999999999986 7888
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeC
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNS 154 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNs 154 (222)
+++++.. ..+. +... +... |+-++++|++++||+|++
T Consensus 523 ~~~~dG~-~~~~---l~~~--------------------------~l~~----PnGlavd~~~~~LY~aD~ 559 (699)
T 1n7d_A 523 KGGLNGV-DIYS---LVTE--------------------------NIQW----PNGITLDLLSGRLYWVDS 559 (699)
T ss_dssp BCCSSSC-CCCE---ESCS--------------------------SCSS----CCCEEECTTTCCEEEEET
T ss_pred EEeCCCC-CeeE---EEeC--------------------------CCCC----ccEEEEeccCCEEEEEec
Confidence 8776321 1111 1100 1223 999999999999999994
No 98
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.18 E-value=2.7e-05 Score=69.42 Aligned_cols=118 Identities=18% Similarity=0.155 Sum_probs=69.1
Q ss_pred eEEEcCCCCeEEEEeccCc--eEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCC-
Q 027522 4 RFLHDPSKDIGFVGCALAS--TMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHG- 80 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELss--tV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~- 80 (222)
-++|+|+|+++++....+. .|+++..+ .++. + .+... . .....+.+||||++|+++....+
T Consensus 227 ~~~~spdg~~la~~~~~~g~~~i~~~d~~-~~~~---~--~l~~~--~--------~~~~~~~~spdg~~l~~~s~~~g~ 290 (415)
T 2hqs_A 227 APAFSPDGSKLAFALSKTGSLNLYVMDLA-SGQI---R--QVTDG--R--------SNNTEPTWFPDSQNLAFTSDQAGR 290 (415)
T ss_dssp EEEECTTSSEEEEEECTTSSCEEEEEETT-TCCE---E--ECCCC--S--------SCEEEEEECTTSSEEEEEECTTSS
T ss_pred CEEEcCCCCEEEEEEecCCCceEEEEECC-CCCE---E--eCcCC--C--------CcccceEECCCCCEEEEEECCCCC
Confidence 4689999997775554443 46666543 3432 1 12110 1 34578999999998887664344
Q ss_pred -cEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCcc
Q 027522 81 -DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAW 159 (222)
Q Consensus 81 -sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~w 159 (222)
.|.+|++.. +++ .++.. .+.. ...+++||||++|+++.
T Consensus 291 ~~i~~~d~~~---~~~-~~l~~---------------------------~~~~----~~~~~~spdG~~l~~~~------ 329 (415)
T 2hqs_A 291 PQVYKVNING---GAP-QRITW---------------------------EGSQ----NQDADVSSDGKFMVMVS------ 329 (415)
T ss_dssp CEEEEEETTS---SCC-EECCC---------------------------SSSE----EEEEEECTTSSEEEEEE------
T ss_pred cEEEEEECCC---CCE-EEEec---------------------------CCCc----ccCeEECCCCCEEEEEE------
Confidence 455555532 222 11111 1222 56789999999999887
Q ss_pred ccccccccccCCcEEEEEEeeCCCCCee
Q 027522 160 DCQFYPELKEKGSHMLQIDVNSEKGGMA 187 (222)
Q Consensus 160 d~Q~yp~~~s~~~~i~~~dvd~~~G~l~ 187 (222)
+. .....|..+|. ++|.+.
T Consensus 330 --~~-----~g~~~i~~~d~--~~~~~~ 348 (415)
T 2hqs_A 330 --SN-----GGQQHIAKQDL--ATGGVQ 348 (415)
T ss_dssp --EC-----SSCEEEEEEET--TTCCEE
T ss_pred --Cc-----CCceEEEEEEC--CCCCEE
Confidence 32 12356666754 566663
No 99
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.18 E-value=8.5e-05 Score=60.74 Aligned_cols=105 Identities=9% Similarity=0.086 Sum_probs=69.0
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
-++|+|+++++++.. +.+|.+|..+............... . ......+.+|||+++|+++.. .+.|.
T Consensus 56 ~~~~~~~~~~l~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~--~--------~~~v~~~~~~~~~~~l~~~~~-d~~i~ 122 (337)
T 1gxr_A 56 AVTISNPTRHVYTGG--KGCVKVWDISHPGNKSPVSQLDCLN--R--------DNYIRSCKLLPDGCTLIVGGE-ASTLS 122 (337)
T ss_dssp EEEECSSSSEEEEEC--BSEEEEEETTSTTCCSCSEEEECSC--T--------TSBEEEEEECTTSSEEEEEES-SSEEE
T ss_pred EEEEecCCcEEEEcC--CCeEEEEECCCCCceeeeecccccC--C--------CCcEEEEEEcCCCCEEEEEcC-CCcEE
Confidence 368999999999887 8999999875332222222222111 1 145789999999999988764 57899
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++.. ...+....... ... ....++++|+|++|+++.
T Consensus 123 ~~d~~~-~~~~~~~~~~~---------------------------~~~----~i~~~~~~~~~~~l~~~~ 160 (337)
T 1gxr_A 123 IWDLAA-PTPRIKAELTS---------------------------SAP----ACYALAISPDSKVCFSCC 160 (337)
T ss_dssp EEECCC-C--EEEEEEEC---------------------------SSS----CEEEEEECTTSSEEEEEE
T ss_pred EEECCC-CCcceeeeccc---------------------------CCC----ceEEEEECCCCCEEEEEe
Confidence 999954 33323222211 011 157899999999999886
No 100
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.18 E-value=9.2e-05 Score=62.04 Aligned_cols=102 Identities=19% Similarity=0.091 Sum_probs=55.9
Q ss_pred EEEcCCCCeEEEEeccC----ceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCC--
Q 027522 5 FLHDPSKDIGFVGCALA----STMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWL-- 78 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELs----stV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRg-- 78 (222)
++++|+|+ .|+.+.-+ ..|.++..+ .+.+. ..+.... . ...+.+|.++|||++++.+..+
T Consensus 92 i~~~~dg~-l~v~~~~~~~~~~~i~~~d~~-~~~~~--~~~~~~~---~-------~~~~~~i~~d~~g~l~v~~~~~~~ 157 (333)
T 2dg1_A 92 IKIHKDGR-LFVCYLGDFKSTGGIFAATEN-GDNLQ--DIIEDLS---T-------AYCIDDMVFDSKGGFYFTDFRGYS 157 (333)
T ss_dssp EEECTTSC-EEEEECTTSSSCCEEEEECTT-SCSCE--EEECSSS---S-------CCCEEEEEECTTSCEEEEECCCBT
T ss_pred EEECCCCc-EEEEeCCCCCCCceEEEEeCC-CCEEE--EEEccCc---c-------CCcccceEECCCCCEEEEeccccc
Confidence 56778875 45554433 467666442 23332 1111110 1 1456899999999754444322
Q ss_pred -CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 79 -HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 79 -h~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
.....+|.++ +...++.. +.. + ... |+.++++|||++||+++
T Consensus 158 ~~~~~~l~~~~-~~~~~~~~-~~~-~--------------------------~~~----~~~i~~~~dg~~l~v~~ 200 (333)
T 2dg1_A 158 TNPLGGVYYVS-PDFRTVTP-IIQ-N--------------------------ISV----ANGIALSTDEKVLWVTE 200 (333)
T ss_dssp TBCCEEEEEEC-TTSCCEEE-EEE-E--------------------------ESS----EEEEEECTTSSEEEEEE
T ss_pred cCCCceEEEEe-CCCCEEEE-eec-C--------------------------CCc----ccceEECCCCCEEEEEe
Confidence 1235566663 33333321 111 0 112 88999999999999998
No 101
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.16 E-value=5.2e-05 Score=64.59 Aligned_cols=60 Identities=25% Similarity=0.473 Sum_probs=44.8
Q ss_pred eeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCee
Q 027522 60 ITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQM 139 (222)
Q Consensus 60 ~adI~iSpDgrfLYvSnRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~ 139 (222)
+..|.+|+||++|||++.+.+.|.+|+++....+.. ++.. .+.| |+.
T Consensus 187 p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~--~~~~------------------------------~~~g-P~g 233 (322)
T 2fp8_A 187 PGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTA--EVLV------------------------------KIPN-PGN 233 (322)
T ss_dssp CCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCE--EEEE------------------------------ECSS-EEE
T ss_pred CcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCcc--ceEE------------------------------eCCC-CCC
Confidence 478999999999999999999999999854221221 0010 1234 999
Q ss_pred EEECCCCCEEEEEe
Q 027522 140 IQLSLDGKRLYVTN 153 (222)
Q Consensus 140 ~~lspdGk~LyvaN 153 (222)
++++++|+ ||||+
T Consensus 234 i~~d~~G~-l~va~ 246 (322)
T 2fp8_A 234 IKRNADGH-FWVSS 246 (322)
T ss_dssp EEECTTSC-EEEEE
T ss_pred eEECCCCC-EEEEe
Confidence 99999997 89997
No 102
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.16 E-value=0.00011 Score=64.15 Aligned_cols=105 Identities=10% Similarity=0.061 Sum_probs=65.8
Q ss_pred eEEEcCCCCeEEEEeccCc---eEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCC
Q 027522 4 RFLHDPSKDIGFVGCALAS---TMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHG 80 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELss---tV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~ 80 (222)
.++|+|+++++.+.+.-.. +|..+.. ..+.....+...+.. . ......|.+||||++|.++. .++
T Consensus 224 ~v~fspdg~~l~~~s~d~~~~~~i~~~~~-~~~~~~~~~~~~~~~-----~-----~~~V~~~~~Spdg~~lasgs-~D~ 291 (365)
T 4h5i_A 224 KINFIADDTVLIAASLKKGKGIVLTKISI-KSGNTSVLRSKQVTN-----R-----FKGITSMDVDMKGELAVLAS-NDN 291 (365)
T ss_dssp EEEEEETTEEEEEEEESSSCCEEEEEEEE-ETTEEEEEEEEEEES-----S-----CSCEEEEEECTTSCEEEEEE-TTS
T ss_pred EEEEcCCCCEEEEEecCCcceeEEeeccc-ccceecceeeeeecC-----C-----CCCeEeEEECCCCCceEEEc-CCC
Confidence 3679999998888776443 3444433 223333333333321 1 03468899999999997766 478
Q ss_pred cEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 81 DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 81 sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|.+|++.. ++++.++.. |.. +....+++||||++|..+.
T Consensus 292 ~V~iwd~~~---~~~~~~~~~----------------------------gH~--~~V~~v~fSpdg~~laS~S 331 (365)
T 4h5i_A 292 SIALVKLKD---LSMSKIFKQ----------------------------AHS--FAITEVTISPDSTYVASVS 331 (365)
T ss_dssp CEEEEETTT---TEEEEEETT----------------------------SSS--SCEEEEEECTTSCEEEEEE
T ss_pred EEEEEECCC---CcEEEEecC----------------------------ccc--CCEEEEEECCCCCEEEEEe
Confidence 999999843 555433321 111 1257899999999887665
No 103
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.14 E-value=0.00012 Score=59.31 Aligned_cols=114 Identities=10% Similarity=0.132 Sum_probs=76.4
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++++|+|+ +|+.+..++.|.++.. +|++.. +..+ .. . ..+..|.+++|| .||++++..+.|.
T Consensus 150 ~i~~d~~g~-l~v~~~~~~~i~~~~~--~g~~~~---~~~~-~~---~------~~~~~i~~d~~g-~l~v~~~~~~~i~ 212 (300)
T 2qc5_A 150 FITLGSDNA-LWFTENQNNSIGRITN--TGKLEE---YPLP-TN---A------AAPVGITSGNDG-ALWFVEIMGNKIG 212 (300)
T ss_dssp EEEECTTSS-EEEEETTTTEEEEECT--TCCEEE---EECS-ST---T------CCEEEEEECTTS-SEEEEETTTTEEE
T ss_pred eEEECCCCC-EEEEecCCCeEEEECC--CCcEEE---eeCC-CC---C------CCcceEEECCCC-CEEEEccCCCEEE
Confidence 467889988 8998888888888864 455542 2222 11 1 456899999998 5899999888888
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCcccccc
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQF 163 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q~ 163 (222)
+|+. .+++.. +.. |. .... |+.++++++|+ |||++ .
T Consensus 213 ~~~~----~g~~~~-~~~---------------------~~----~~~~----~~~i~~d~~g~-l~v~~--------~- 248 (300)
T 2qc5_A 213 RITT----TGEISE-YDI---------------------PT----PNAR----PHAITAGKNSE-IWFTE--------W- 248 (300)
T ss_dssp EECT----TCCEEE-EEC---------------------SS----TTCC----EEEEEECSTTC-EEEEE--------T-
T ss_pred EEcC----CCcEEE-EEC---------------------CC----CCCC----ceEEEECCCCC-EEEec--------c-
Confidence 8854 233321 111 00 1233 99999999997 99998 2
Q ss_pred ccccccCCcEEEEEEeeCCCCCee
Q 027522 164 YPELKEKGSHMLQIDVNSEKGGMA 187 (222)
Q Consensus 164 yp~~~s~~~~i~~~dvd~~~G~l~ 187 (222)
.+..|.++|. +|.+.
T Consensus 249 ------~~~~i~~~~~---~g~~~ 263 (300)
T 2qc5_A 249 ------GANQIGRITN---DNTIQ 263 (300)
T ss_dssp ------TTTEEEEECT---TSCEE
T ss_pred ------CCCeEEEECC---CCcEE
Confidence 4567788744 46543
No 104
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.14 E-value=0.00022 Score=58.23 Aligned_cols=101 Identities=19% Similarity=0.219 Sum_probs=68.7
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|+|+++++++.++ +++|.+|..+ +++.......... . .....+.++||+++|++++. .+.|.
T Consensus 102 ~~~~~~~~~~l~~~~~-d~~i~~~d~~-~~~~~~~~~~~~~----~--------~~i~~~~~~~~~~~l~~~~~-dg~v~ 166 (337)
T 1gxr_A 102 SCKLLPDGCTLIVGGE-ASTLSIWDLA-APTPRIKAELTSS----A--------PACYALAISPDSKVCFSCCS-DGNIA 166 (337)
T ss_dssp EEEECTTSSEEEEEES-SSEEEEEECC-CC--EEEEEEECS----S--------SCEEEEEECTTSSEEEEEET-TSCEE
T ss_pred EEEEcCCCCEEEEEcC-CCcEEEEECC-CCCcceeeecccC----C--------CceEEEEECCCCCEEEEEeC-CCcEE
Confidence 4789999999888875 6788888764 3333222222211 1 34689999999999998875 57899
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++.. ++.+..+.. ... ..+.++++|+|++|+++.
T Consensus 167 ~~d~~~---~~~~~~~~~---------------------------~~~----~i~~~~~~~~~~~l~~~~ 202 (337)
T 1gxr_A 167 VWDLHN---QTLVRQFQG---------------------------HTD----GASCIDISNDGTKLWTGG 202 (337)
T ss_dssp EEETTT---TEEEEEECC---------------------------CSS----CEEEEEECTTSSEEEEEE
T ss_pred EEeCCC---Cceeeeeec---------------------------ccC----ceEEEEECCCCCEEEEEe
Confidence 999843 444333221 011 278899999999999886
No 105
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.13 E-value=2e-05 Score=76.01 Aligned_cols=99 Identities=11% Similarity=0.146 Sum_probs=70.8
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCC-CCcEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWL-HGDIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRg-h~sI~ 83 (222)
+|+++.++.+|+...-...|.++..+ |+.. +++ ..... ..+.+|+++|...+||++.|+ .+.|.
T Consensus 85 lAvD~~~~~LY~tD~~~~~I~v~~~d--G~~~--~~l--~~~~l---------~~P~~iavdp~~G~lY~tD~g~~~~I~ 149 (628)
T 4a0p_A 85 MAVDWLGKNLYWADTGTNRIEVSKLD--GQHR--QVL--VWKDL---------DSPRALALDPAEGFMYWTEWGGKPKID 149 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETT--STTC--EEE--ECSSC---------CCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred EEEEeCCCEEEEEECCCCEEEEEecC--CCcE--EEE--EeCCC---------CCcccEEEccCCCeEEEeCCCCCCEEE
Confidence 67788889999999988999999864 4432 121 11111 457999999999999999998 67788
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+++.+. ...+. +-. ...+ |+-+++++++++||+|+
T Consensus 150 r~~~dG-~~~~~---l~~---------------------------~~~~----P~GlalD~~~~~LY~aD 184 (628)
T 4a0p_A 150 RAAMDG-SERTT---LVP---------------------------NVGR----ANGLTIDYAKRRLYWTD 184 (628)
T ss_dssp EEETTS-CSCEE---EEC---------------------------SCSS----EEEEEEETTTTEEEEEE
T ss_pred EEeCCC-CceEE---EEC---------------------------CCCC----cceEEEccccCEEEEEE
Confidence 777632 22222 111 1234 99999999999999999
No 106
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.11 E-value=2.7e-05 Score=71.86 Aligned_cols=71 Identities=10% Similarity=0.094 Sum_probs=45.1
Q ss_pred eEEEcCCCCeEEEEeccC---------ceEEEEEeCCC-----CCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCC
Q 027522 4 RFLHDPSKDIGFVGCALA---------STMVRFSKTQD-----GSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDD 69 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELs---------stV~~~~~d~~-----g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDg 69 (222)
-++|+|||++++..++-. .+|+++..+.. |... . +... + +.....+.+||||
T Consensus 134 ~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~--l~~~---~------~~~~~~~~~SpDG 199 (662)
T 3azo_A 134 DPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR---E--LSDD---A------HRFVTGPRLSPDG 199 (662)
T ss_dssp EEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE---E--SSCS---C------SSEECCCEECTTS
T ss_pred CcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee---E--EEec---C------CCcccCceECCCC
Confidence 368999999988887641 45666654321 3221 1 1100 1 1345678999999
Q ss_pred CEEEEEeCCC-------CcEEEEEec
Q 027522 70 RFLYFSNWLH-------GDIRQYNIE 88 (222)
Q Consensus 70 rfLYvSnRgh-------~sI~vf~i~ 88 (222)
|+|+.+.+.+ ..|.+++++
T Consensus 200 ~~la~~~~~~~~~~~~~~~i~~~d~~ 225 (662)
T 3azo_A 200 RQAVWLAWDHPRMPWEGTELKTARVT 225 (662)
T ss_dssp SEEEEEEECTTCCTTTCEEEEEEEEC
T ss_pred CEEEEEECCCCCCCCCCcEEEEEEEC
Confidence 9998766544 479999885
No 107
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.10 E-value=3.3e-05 Score=72.08 Aligned_cols=113 Identities=14% Similarity=0.074 Sum_probs=66.2
Q ss_pred eEEEcCCCCeEEEEeccCc-----eEEEEEeCCCCCeeEEEEEEecCcccc-------cccC---CCC--CCceeEEEEc
Q 027522 4 RFLHDPSKDIGFVGCALAS-----TMVRFSKTQDGSWNHEVAISVKSLKVQ-------NWIL---PEM--PGLITDFLIS 66 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELss-----tV~~~~~d~~g~~~~~q~is~~p~~~~-------g~~~---~~~--~~~~adI~iS 66 (222)
.++|+|||++++.++.-+. +|+++..+ +|+. .+.......... +... ..+ ......+.+|
T Consensus 41 ~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~-~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S 117 (741)
T 2ecf_A 41 KPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIG-SGQT--RLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS 117 (741)
T ss_dssp EEEECTTSSEEEEEECCSSCTTEEEEEEEETT-TCCE--EEEECGGGTC--------------------CCEESCCCEEC
T ss_pred CceEecCCCEEEEEeccCCCCcccEEEEEECC-CCce--eEccchhhcccccccccchhhhhhhhhhhccccCcceeEEC
Confidence 4789999999888887444 78777653 3433 233322100000 0000 000 0124688999
Q ss_pred CCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCC
Q 027522 67 LDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDG 146 (222)
Q Consensus 67 pDgrfLYvSnRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdG 146 (222)
|||++|+++.. +.|.+|++.....+++. ++.. .+. .++.+++||||
T Consensus 118 pDg~~l~~~~~--~~i~~~d~~~~~~~~~~-~l~~---------------------------~~~----~~~~~~~SPDG 163 (741)
T 2ecf_A 118 PDAQRLLFPLG--GELYLYDLKQEGKAAVR-QLTH---------------------------GEG----FATDAKLSPKG 163 (741)
T ss_dssp TTSSEEEEEET--TEEEEEESSSCSTTSCC-BCCC---------------------------SSS----CEEEEEECTTS
T ss_pred CCCCEEEEEeC--CcEEEEECCCCCcceEE-Eccc---------------------------CCc----ccccccCCCCC
Confidence 99999998886 88999998542101220 0010 012 27889999999
Q ss_pred CEEEEEe
Q 027522 147 KRLYVTN 153 (222)
Q Consensus 147 k~LyvaN 153 (222)
++|+.+.
T Consensus 164 ~~la~~~ 170 (741)
T 2ecf_A 164 GFVSFIR 170 (741)
T ss_dssp SEEEEEE
T ss_pred CEEEEEe
Confidence 9988775
No 108
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.09 E-value=0.00019 Score=59.18 Aligned_cols=98 Identities=9% Similarity=0.040 Sum_probs=69.2
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|+|+++++++..+ +.+|.+|... +++. .+.+.. .. .....|.+|||+++|+++.. .+.|.
T Consensus 37 ~~~~s~~~~~l~~~~~-dg~i~vwd~~-~~~~--~~~~~~----h~--------~~v~~~~~~~~~~~l~s~~~-dg~i~ 99 (369)
T 3zwl_B 37 QVKYNKEGDLLFSCSK-DSSASVWYSL-NGER--LGTLDG----HT--------GTIWSIDVDCFTKYCVTGSA-DYSIK 99 (369)
T ss_dssp EEEECTTSCEEEEEES-SSCEEEEETT-TCCE--EEEECC----CS--------SCEEEEEECTTSSEEEEEET-TTEEE
T ss_pred EEEEcCCCCEEEEEeC-CCEEEEEeCC-Cchh--hhhhhh----cC--------CcEEEEEEcCCCCEEEEEeC-CCeEE
Confidence 4789999999888875 6788888764 3322 222211 11 44689999999999987764 67899
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++.. ++.+..+.. ... ...++++|+|++|+++.
T Consensus 100 iwd~~~---~~~~~~~~~----------------------------~~~----v~~~~~~~~~~~l~~~~ 134 (369)
T 3zwl_B 100 LWDVSN---GQCVATWKS----------------------------PVP----VKRVEFSPCGNYFLAIL 134 (369)
T ss_dssp EEETTT---CCEEEEEEC----------------------------SSC----EEEEEECTTSSEEEEEE
T ss_pred EEECCC---CcEEEEeec----------------------------CCC----eEEEEEccCCCEEEEec
Confidence 999853 444433332 122 77899999999999987
No 109
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.07 E-value=7.5e-05 Score=66.86 Aligned_cols=100 Identities=15% Similarity=0.160 Sum_probs=70.8
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++|++....+|+.......|.++..+ |+. .+.++. . +. ..+..|++++.++.||++..+.+.|.+
T Consensus 121 l~~d~~~~~ly~~D~~~~~I~r~~~~--g~~-~~~~~~---~---~~------~~p~glavd~~~g~lY~~d~~~~~I~~ 185 (386)
T 3v65_B 121 LDFHHRRELVFWSDVTLDRILRANLN--GSN-VEEVVS---T---GL------ESPGGLAVDWVHDKLYWTDSGTSRIEV 185 (386)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETT--SCC-EEEEEC---S---SC------SCCCCEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEecCCCeEEEEeCCCCcEEEEecC--CCC-cEEEEe---C---CC------CCccEEEEEeCCCeEEEEcCCCCeEEE
Confidence 78999999999999999999999764 322 112221 1 11 234789999999999999999998988
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
++.+. ...+. +...+ -.. |+.++++|++.+||+++
T Consensus 186 ~~~dg-~~~~~---l~~~~--------------------------l~~----P~giavdp~~g~ly~td 220 (386)
T 3v65_B 186 ANLDG-AHRKV---LLWQS--------------------------LEK----PRAIALHPMEGTIYWTD 220 (386)
T ss_dssp CBTTS-CSCEE---EECSS--------------------------CSC----EEEEEEETTTTEEEEEE
T ss_pred EeCCC-CceEE---eecCC--------------------------CCC----CcEEEEEcCCCeEEEec
Confidence 87632 11111 11110 123 99999999999999998
No 110
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.07 E-value=0.00017 Score=58.44 Aligned_cols=109 Identities=12% Similarity=0.127 Sum_probs=72.2
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++++|+| .+|+.+..++.|.++.. +|++.. +.++ . +. ..+..|.+++||+ ||++++..+.|.
T Consensus 145 ~i~~~~~g-~l~v~~~~~~~i~~~~~--~g~~~~---~~~~-~---~~------~~~~~i~~~~~g~-l~v~~~~~~~i~ 207 (299)
T 2z2n_A 145 FITLGSDN-ALWFTENQNNAIGRITE--SGDITE---FKIP-T---PA------SGPVGITKGNDDA-LWFVEIIGNKIG 207 (299)
T ss_dssp EEEECTTS-CEEEEETTTTEEEEECT--TCCEEE---EECS-S---TT------CCEEEEEECTTSS-EEEEETTTTEEE
T ss_pred eEEEcCCC-CEEEEeCCCCEEEEEcC--CCcEEE---eeCC-C---CC------CcceeEEECCCCC-EEEEccCCceEE
Confidence 36778887 57887776788888754 455432 2222 1 11 4468999999998 899999888898
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCcccccc
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQF 163 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q~ 163 (222)
+|+. ++++. .+.... .... |+.++++++|+ |||++
T Consensus 208 ~~~~----~g~~~-~~~~~~-------------------------~~~~----~~~i~~~~~g~-l~v~~---------- 242 (299)
T 2z2n_A 208 RITT----SGEIT-EFKIPT-------------------------PNAR----PHAITAGAGID-LWFTE---------- 242 (299)
T ss_dssp EECT----TCCEE-EEECSS-------------------------TTCC----EEEEEECSTTC-EEEEE----------
T ss_pred EECC----CCcEE-EEECCC-------------------------CCCC----ceeEEECCCCC-EEEec----------
Confidence 8865 23332 122100 1223 99999999997 99998
Q ss_pred ccccccCCcEEEEEEe
Q 027522 164 YPELKEKGSHMLQIDV 179 (222)
Q Consensus 164 yp~~~s~~~~i~~~dv 179 (222)
..+..|.++|.
T Consensus 243 -----~~~~~i~~~d~ 253 (299)
T 2z2n_A 243 -----WGANKIGRLTS 253 (299)
T ss_dssp -----TTTTEEEEEET
T ss_pred -----cCCceEEEECC
Confidence 24567777854
No 111
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.07 E-value=0.00018 Score=64.14 Aligned_cols=99 Identities=13% Similarity=-0.019 Sum_probs=62.5
Q ss_pred eEEEcCCCCeEEEEeccC--ceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCC--
Q 027522 4 RFLHDPSKDIGFVGCALA--STMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH-- 79 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELs--stV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh-- 79 (222)
-++|+|+|++++.+..-+ .+|.++... +|+.. + +.-. . .....+.+||||++|+++....
T Consensus 183 ~~~~Spdg~~la~~s~~~~~~~i~~~d~~-tg~~~--~-l~~~----~--------~~~~~~~~spdg~~la~~~~~~g~ 246 (415)
T 2hqs_A 183 SPAWSPDGSKLAYVTFESGRSALVIQTLA-NGAVR--Q-VASF----P--------RHNGAPAFSPDGSKLAFALSKTGS 246 (415)
T ss_dssp EEEECTTSSEEEEEECTTSSCEEEEEETT-TCCEE--E-EECC----S--------SCEEEEEECTTSSEEEEEECTTSS
T ss_pred eeEEcCCCCEEEEEEecCCCcEEEEEECC-CCcEE--E-eecC----C--------CcccCEEEcCCCCEEEEEEecCCC
Confidence 468999999887777543 478877653 44432 2 2111 1 3357899999999998665433
Q ss_pred CcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 80 GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 80 ~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
..|.+|++.. +++. ++... .. ....+++||||++|+++.
T Consensus 247 ~~i~~~d~~~---~~~~-~l~~~---------------------------~~----~~~~~~~spdg~~l~~~s 285 (415)
T 2hqs_A 247 LNLYVMDLAS---GQIR-QVTDG---------------------------RS----NNTEPTWFPDSQNLAFTS 285 (415)
T ss_dssp CEEEEEETTT---CCEE-ECCCC---------------------------SS----CEEEEEECTTSSEEEEEE
T ss_pred ceEEEEECCC---CCEE-eCcCC---------------------------CC----cccceEECCCCCEEEEEE
Confidence 4488887732 3331 11110 11 256789999999999886
No 112
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.07 E-value=0.00019 Score=63.37 Aligned_cols=135 Identities=16% Similarity=0.069 Sum_probs=87.8
Q ss_pred EEEcCCCCeEEEEeccC-ceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 5 FLHDPSKDIGFVGCALA-STMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELs-stV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
++++|.+.++|+...-. ..|.++..+ |+.. + .+.... - ..+..|.++|+++.||++.++.+.|.
T Consensus 164 iavdp~~g~ly~td~~~~~~I~r~~~d--G~~~--~--~~~~~~---~------~~PnGla~d~~~~~lY~aD~~~~~I~ 228 (349)
T 3v64_C 164 IALHPMEGTIYWTDWGNTPRIEASSMD--GSGR--R--IIADTH---L------FWPNGLTIDYAGRRMYWVDAKHHVIE 228 (349)
T ss_dssp EEEETTTTEEEEEECSSSCEEEEEETT--SCSC--E--ESCCSS---C------SCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEecCcCeEEEeccCCCCEEEEEeCC--CCCc--E--EEEECC---C------CCcceEEEeCCCCEEEEEECCCCEEE
Confidence 57899999999998777 889988765 3321 1 111111 1 45689999999999999999999999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCcccccc
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQF 163 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q~ 163 (222)
+|+.+. ...+. +... ...+ |.-+++ ++.+||+|+
T Consensus 229 ~~~~dG-~~~~~---~~~~--------------------------~~~~----P~giav--~~~~ly~td---------- 262 (349)
T 3v64_C 229 RANLDG-SHRKA---VISQ--------------------------GLPH----PFAITV--FEDSLYWTD---------- 262 (349)
T ss_dssp EEETTS-CSCEE---EECS--------------------------SCSS----EEEEEE--ETTEEEEEE----------
T ss_pred EEeCCC-CceEE---EEeC--------------------------CCCC----ceEEEE--ECCEEEEec----------
Confidence 998843 22221 1110 0123 888898 567999999
Q ss_pred ccccccCCcEEEEEEeeCCCCCee--eccceeEecCCCCCCCcceeeeecC
Q 027522 164 YPELKEKGSHMLQIDVNSEKGGMA--INPNFFVDFEAEPDGPALAHEMRYP 212 (222)
Q Consensus 164 yp~~~s~~~~i~~~dvd~~~G~l~--~~~~f~vdf~~~~~g~~~~h~~r~~ 212 (222)
..+..|.++| ..+|+.. +.. -...|.|-..-|.-|-|
T Consensus 263 -----~~~~~V~~~~--~~~G~~~~~i~~-----~~~~p~gi~v~~~~~qp 301 (349)
T 3v64_C 263 -----WHTKSINSAN--KFTGKNQEIIRN-----KLHFPMDIHTLHPQRQP 301 (349)
T ss_dssp -----TTTTEEEEEE--TTTCCSCEEEEC-----SCSCCCCEEEECGGGSC
T ss_pred -----CCCCeEEEEE--ccCCCccEEecc-----CCCCCceEEEEccccCc
Confidence 3577888884 4566531 211 12345565555655554
No 113
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.02 E-value=8.2e-05 Score=68.04 Aligned_cols=114 Identities=10% Similarity=0.044 Sum_probs=67.0
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEE-eCCC--Cc
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFS-NWLH--GD 81 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvS-nRgh--~s 81 (222)
++|+|+|+..+++......+.+|..+ +|+. ++....+ . .++.+|||||+|+.+ ++.. .+
T Consensus 115 ~~~s~dg~~~~~~s~~~~~~~l~d~~-~g~~--~~l~~~~-------------~--~~~~~spDG~~la~~~~~~~~~~~ 176 (582)
T 3o4h_A 115 LSGVDTGEAVVFTGATEDRVALYALD-GGGL--RELARLP-------------G--FGFVSDIRGDLIAGLGFFGGGRVS 176 (582)
T ss_dssp EEEEECSSCEEEEEECSSCEEEEEEE-TTEE--EEEEEES-------------S--CEEEEEEETTEEEEEEEEETTEEE
T ss_pred eeeCCCCCeEEEEecCCCCceEEEcc-CCcE--EEeecCC-------------C--ceEEECCCCCEEEEEEEcCCCCeE
Confidence 47899998766666666666666553 3432 2221110 1 678999999999954 4433 34
Q ss_pred EEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCcccc
Q 027522 82 IRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDC 161 (222)
Q Consensus 82 I~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~ 161 (222)
|.+++++. +++. ++.. . ... .+.+++||||++|+.+.
T Consensus 177 i~~~d~~~---g~~~-~l~~-~--------------------------~~~----~~~~~~SpDG~~l~~~~-------- 213 (582)
T 3o4h_A 177 LFTSNLSS---GGLR-VFDS-G--------------------------EGS----FSSASISPGMKVTAGLE-------- 213 (582)
T ss_dssp EEEEETTT---CCCE-EECC-S--------------------------SCE----EEEEEECTTSCEEEEEE--------
T ss_pred EEEEcCCC---CCce-Eeec-C--------------------------CCc----cccceECCCCCEEEEcc--------
Confidence 55565532 3221 1111 0 011 57889999999999444
Q ss_pred ccccccccCCcEEEEEEeeCCCCCee
Q 027522 162 QFYPELKEKGSHMLQIDVNSEKGGMA 187 (222)
Q Consensus 162 Q~yp~~~s~~~~i~~~dvd~~~G~l~ 187 (222)
. ....+|+.+|+ ++|.++
T Consensus 214 ~------~~~~~i~~~d~--~~~~~~ 231 (582)
T 3o4h_A 214 T------AREARLVTVDP--RDGSVE 231 (582)
T ss_dssp C------SSCEEEEEECT--TTCCEE
T ss_pred C------CCeeEEEEEcC--CCCcEE
Confidence 2 12347777754 677765
No 114
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.01 E-value=0.00019 Score=65.80 Aligned_cols=139 Identities=14% Similarity=0.122 Sum_probs=82.3
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCC-CCCeeEEEEE-Ee-cCcccc-cccCCCCCCceeEEEEc--------CCCCEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQ-DGSWNHEVAI-SV-KSLKVQ-NWILPEMPGLITDFLIS--------LDDRFL 72 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~-~g~~~~~q~i-s~-~p~~~~-g~~~~~~~~~~adI~iS--------pDgrfL 72 (222)
++|+|+|+++|+....++.|.++.++. .+.+....++ -. ....+. |......-+.+..|.+. .++..|
T Consensus 278 ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~l 357 (433)
T 4hw6_A 278 IVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDF 357 (433)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEE
T ss_pred EEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcE
Confidence 899999999999999999999999873 3554322222 11 111111 10000011457889993 455579
Q ss_pred EEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccC----cccCCCCeeEEECCCCCE
Q 027522 73 YFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQG----HRLRGGPQMIQLSLDGKR 148 (222)
Q Consensus 73 YvSnRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G----~~~~ggPr~~~lspdGk~ 148 (222)
||+.++.+.|++|+ + .+++. .+.-.|. +.......| ...-..|+-++++|+...
T Consensus 358 yvaD~~n~~I~~~~---~-~G~v~-t~~G~g~-----------------~~~~G~~dG~~~~~~~~~~P~giavd~~~g~ 415 (433)
T 4hw6_A 358 YFCDRDSHTVRVLT---P-EGRVT-TYAGRGN-----------------SREWGYVDGELRSQALFNHPTSIAYDMKRKC 415 (433)
T ss_dssp EEEETTTTEEEEEC---T-TSEEE-EEECCCT-----------------TCSSCCBCEETTTTCBCSSEEEEEEETTTTE
T ss_pred EEEECCCCEEEEEC---C-CCCEE-EEEeCCC-----------------CCccccCCCccccccEeCCCcEEEEECCCCE
Confidence 99999999999884 3 34442 1111010 000000011 000013999999977778
Q ss_pred EEEEeCCCCccccccccccccCCcEEEEEEee
Q 027522 149 LYVTNSLFSAWDCQFYPELKEKGSHMLQIDVN 180 (222)
Q Consensus 149 LyvaNsl~~~wd~Q~yp~~~s~~~~i~~~dvd 180 (222)
||||+ +.|..|.+++.+
T Consensus 416 lyVaD---------------~~n~rIr~i~~e 432 (433)
T 4hw6_A 416 FYIGD---------------CDNHRVRKIAPE 432 (433)
T ss_dssp EEEEE---------------GGGTEEEEEEEC
T ss_pred EEEEe---------------CCCCEEEEEecC
Confidence 99999 457888888653
No 115
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.99 E-value=0.00027 Score=57.31 Aligned_cols=107 Identities=8% Similarity=0.193 Sum_probs=72.9
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++++|+| .+|+.+.-++.|.++.. +|++.. ..++ . +. ..+..|.++++|+ ||+++++.+.|.
T Consensus 192 ~i~~d~~g-~l~v~~~~~~~i~~~~~--~g~~~~---~~~~-~---~~------~~~~~i~~d~~g~-l~v~~~~~~~i~ 254 (300)
T 2qc5_A 192 GITSGNDG-ALWFVEIMGNKIGRITT--TGEISE---YDIP-T---PN------ARPHAITAGKNSE-IWFTEWGANQIG 254 (300)
T ss_dssp EEEECTTS-SEEEEETTTTEEEEECT--TCCEEE---EECS-S---TT------CCEEEEEECSTTC-EEEEETTTTEEE
T ss_pred eEEECCCC-CEEEEccCCCEEEEEcC--CCcEEE---EECC-C---CC------CCceEEEECCCCC-EEEeccCCCeEE
Confidence 46788887 57888877788888854 455432 2222 1 11 4568999999998 999999989999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCcccccc
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQF 163 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q~ 163 (222)
+|+. ++++. .+... ..... |+.++++++|+ ||+++
T Consensus 255 ~~~~----~g~~~-~~~~~-------------------------~~~~~----~~~i~~~~~g~-l~v~~---------- 289 (300)
T 2qc5_A 255 RITN----DNTIQ-EYQLQ-------------------------TENAE----PHGITFGKDGS-VWFAL---------- 289 (300)
T ss_dssp EECT----TSCEE-EEECC-------------------------STTCC----CCCEEECTTSC-EEEEC----------
T ss_pred EECC----CCcEE-EEECC-------------------------ccCCc----cceeEeCCCCC-EEEEc----------
Confidence 9865 23332 11110 01223 99999999997 99998
Q ss_pred ccccccCCcEEEEEEe
Q 027522 164 YPELKEKGSHMLQIDV 179 (222)
Q Consensus 164 yp~~~s~~~~i~~~dv 179 (222)
. + .|+++|.
T Consensus 290 -----~-~-~i~~~~p 298 (300)
T 2qc5_A 290 -----K-C-KIGKLNL 298 (300)
T ss_dssp -----S-S-EEEEEEE
T ss_pred -----c-C-ceEEeCC
Confidence 4 5 7888865
No 116
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.98 E-value=0.0003 Score=56.98 Aligned_cols=67 Identities=9% Similarity=0.131 Sum_probs=49.7
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++++|+|+ +|+.+..++.|.++.. +|++. .+.++ . +. ..+..|.+++||+ ||++++..+.|.
T Consensus 187 ~i~~~~~g~-l~v~~~~~~~i~~~~~--~g~~~---~~~~~-~---~~------~~~~~i~~~~~g~-l~v~~~~~~~i~ 249 (299)
T 2z2n_A 187 GITKGNDDA-LWFVEIIGNKIGRITT--SGEIT---EFKIP-T---PN------ARPHAITAGAGID-LWFTEWGANKIG 249 (299)
T ss_dssp EEEECTTSS-EEEEETTTTEEEEECT--TCCEE---EEECS-S---TT------CCEEEEEECSTTC-EEEEETTTTEEE
T ss_pred eEEECCCCC-EEEEccCCceEEEECC--CCcEE---EEECC-C---CC------CCceeEEECCCCC-EEEeccCCceEE
Confidence 467889887 7888887888888865 45543 22222 1 11 4568999999998 999999989999
Q ss_pred EEEe
Q 027522 84 QYNI 87 (222)
Q Consensus 84 vf~i 87 (222)
+|+.
T Consensus 250 ~~d~ 253 (299)
T 2z2n_A 250 RLTS 253 (299)
T ss_dssp EEET
T ss_pred EECC
Confidence 9976
No 117
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.97 E-value=1.5e-05 Score=67.71 Aligned_cols=130 Identities=9% Similarity=0.006 Sum_probs=65.2
Q ss_pred eEEEcCCCCeE-EEEeccCce---EEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEe---
Q 027522 4 RFLHDPSKDIG-FVGCALAST---MVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSN--- 76 (222)
Q Consensus 4 r~afhP~g~~a-Yvv~ELsst---V~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSn--- 76 (222)
.++|+|+|+.+ |+..+-+.. |+++.. +.|+.. +....+ . ..... .....+.+||||++|+++.
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~-~~g~~~--~l~~~~-~-~~~~~-----~~~~~~~~spdg~~l~~~~~~~ 311 (388)
T 3pe7_A 242 HEFWVPDGSALVYVSYLKGSPDRFIYSADP-ETLENR--QLTSMP-A-CSHLM-----SNYDGSLMVGDGSDAPVDVQDD 311 (388)
T ss_dssp EEEECTTSSCEEEEEEETTCCCEEEEEECT-TTCCEE--EEEEEC-C-EEEEE-----ECTTSSEEEEEECCC-------
T ss_pred cceECCCCCEEEEEecCCCCCcceEEEEec-CCCceE--EEEcCC-C-ceeee-----ecCCCCeEccCCCcceeEeeec
Confidence 46899999855 776665543 555543 345432 222222 1 00000 0012347999999999764
Q ss_pred -----CCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEE
Q 027522 77 -----WLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYV 151 (222)
Q Consensus 77 -----Rgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~Lyv 151 (222)
.+...|.+|+++. +++ .++..... ...++ .+.+ ......+++||||++|+.
T Consensus 312 ~~~~~~~~~~i~~~d~~~---~~~-~~l~~~~~-----~~~~~--------------~~~~-~~~~~~~~~spDg~~l~~ 367 (388)
T 3pe7_A 312 SGYKIENDPFLYVFNMKN---GTQ-HRVARHDT-----SWKVF--------------EGDR-QVTHPHPSFTPDDKQILF 367 (388)
T ss_dssp -----CCCCEEEEEETTT---TEE-EEEEECCC-----CCCCB--------------TTBS-STTCCCCEECTTSSEEEE
T ss_pred cccccCCCCEEEEEeccC---Cce-EEeccccC-----ccccc--------------cccc-ccCCCCccCCCCCCEEEE
Confidence 4566788887632 333 22222100 00000 0000 001456799999999998
Q ss_pred EeCCCCccccccccccccCCcEEEEEEee
Q 027522 152 TNSLFSAWDCQFYPELKEKGSHMLQIDVN 180 (222)
Q Consensus 152 aNsl~~~wd~Q~yp~~~s~~~~i~~~dvd 180 (222)
+. .. .....++.++++
T Consensus 368 ~s--------~~-----~g~~~l~~~~l~ 383 (388)
T 3pe7_A 368 TS--------DV-----HGKPALYLATLP 383 (388)
T ss_dssp EE--------CT-----TSSCEEEEEECC
T ss_pred Ee--------cC-----CCceeEEEEECC
Confidence 76 22 345678888664
No 118
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.95 E-value=0.0005 Score=58.83 Aligned_cols=104 Identities=5% Similarity=0.044 Sum_probs=67.6
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|+|+++++..... +.+|.++..+ .+.+.....+. +. ......|.+||||++|..+.+ .+.|.
T Consensus 66 ~~~~sp~g~~l~s~s~-D~~v~iw~~~-~~~~~~~~~~~-------~h-----~~~v~~v~~sp~~~~l~s~s~-D~~v~ 130 (345)
T 3fm0_A 66 KVAWSPCGNYLASASF-DATTCIWKKN-QDDFECVTTLE-------GH-----ENEVKSVAWAPSGNLLATCSR-DKSVW 130 (345)
T ss_dssp EEEECTTSSEEEEEET-TSCEEEEEEC-CC-EEEEEEEC-------CC-----SSCEEEEEECTTSSEEEEEET-TSCEE
T ss_pred EEEECCCCCEEEEEEC-CCcEEEEEcc-CCCeEEEEEcc-------CC-----CCCceEEEEeCCCCEEEEEEC-CCeEE
Confidence 3789999998877765 7888888764 33443332221 11 034689999999999987764 67999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++......+.+..+.. . .. .-+.++++|+|++|+.+.
T Consensus 131 iwd~~~~~~~~~~~~~~~--h-------------------------~~----~v~~~~~~p~~~~l~s~s 169 (345)
T 3fm0_A 131 VWEVDEEDEYECVSVLNS--H-------------------------TQ----DVKHVVWHPSQELLASAS 169 (345)
T ss_dssp EEEECTTSCEEEEEEECC--C-------------------------CS----CEEEEEECSSSSCEEEEE
T ss_pred EEECCCCCCeEEEEEecC--c-------------------------CC----CeEEEEECCCCCEEEEEe
Confidence 999964332222211111 0 11 156789999999888875
No 119
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.95 E-value=0.00056 Score=56.39 Aligned_cols=99 Identities=7% Similarity=0.005 Sum_probs=69.5
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|+|+++++++.++ +.+|.+|.....+ .....+... . .....|.+|||+++|+++.. .+.|.
T Consensus 180 ~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~--~~~~~~~~~----~--------~~v~~~~~~~~~~~l~~~~~-d~~i~ 243 (369)
T 3zwl_B 180 VAGWSTKGKYIIAGHK-DGKISKYDVSNNY--EYVDSIDLH----E--------KSISDMQFSPDLTYFITSSR-DTNSF 243 (369)
T ss_dssp EEEECGGGCEEEEEET-TSEEEEEETTTTT--EEEEEEECC----S--------SCEEEEEECTTSSEEEEEET-TSEEE
T ss_pred EEEEcCCCCEEEEEcC-CCEEEEEECCCCc--EeEEEEecC----C--------CceeEEEECCCCCEEEEecC-CceEE
Confidence 4679999999888776 6788888764322 223333221 1 34689999999999988764 67899
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++.. ++++..+.. ... ...++++|+|++|+++.
T Consensus 244 v~d~~~---~~~~~~~~~----------------------------~~~----~~~~~~~~~~~~l~~~~ 278 (369)
T 3zwl_B 244 LVDVST---LQVLKKYET----------------------------DCP----LNTAVITPLKEFIILGG 278 (369)
T ss_dssp EEETTT---CCEEEEEEC----------------------------SSC----EEEEEECSSSSEEEEEE
T ss_pred EEECCC---CceeeeecC----------------------------CCC----ceeEEecCCCceEEEee
Confidence 999843 444433332 112 67899999999999987
No 120
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.95 E-value=6.7e-05 Score=72.18 Aligned_cols=101 Identities=12% Similarity=0.184 Sum_probs=70.7
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCC-CcEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH-GDIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh-~sI~ 83 (222)
+|+++.++.+|+.......|.++..+ |+.. +++ ..... ..+.+|++.|.+.+||+++|+. ..|.
T Consensus 89 lAvD~~~~~ly~~d~~~~~I~v~~~d--G~~~--~~l--~~~~l---------~~P~~Iavdp~~g~ly~tD~g~~~~I~ 153 (619)
T 3s94_A 89 LACDWLGEKLYWTDSETNRIEVSNLD--GSLR--KVL--FWQEL---------DQPRAIALDPSSGFMYWTDWGEVPKIE 153 (619)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETT--SCSC--EEE--ECSSC---------SCCCCEEEETTTTEEEEEECSSSCEEE
T ss_pred EEEEecCCEEEEEeCCCCEEEEEECC--CCCE--EEE--EeCCC---------CCCceEEEecCCCeEEEeccCCCCEEE
Confidence 68899999999999999999999864 4432 121 11111 3468999999999999999984 5676
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeC
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNS 154 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNs 154 (222)
+++.+. ...+.+ +.. ...+ |.-+++++++++||+|++
T Consensus 154 r~~~dG-~~~~~l--~~~---------------------------~~~~----P~Glald~~~~~LY~aD~ 190 (619)
T 3s94_A 154 RAGMDG-SSRFII--INS---------------------------EIYW----PNGLTLDYEEQKLYWADA 190 (619)
T ss_dssp EEETTS-CSCEEE--ECS---------------------------SCSS----EEEEEEETTTTEEEEEET
T ss_pred EEECCC-CceEEE--EeC---------------------------CCCC----CcEEEEEccCCEEEEEeC
Confidence 666532 112110 100 1234 999999999999999983
No 121
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.94 E-value=0.00021 Score=61.75 Aligned_cols=104 Identities=7% Similarity=0.064 Sum_probs=68.2
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEe--CCCCc
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSN--WLHGD 81 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSn--Rgh~s 81 (222)
-++|+|+++++++.++ +.+|.+|... +++ ..+.+.... .+ .....+.+||||++|+++. ...+.
T Consensus 181 ~~~~~~~~~~l~~~~~-d~~i~iwd~~-~~~--~~~~~~~~~---~~-------~~~~~~~~~~~~~~l~~g~~~~~d~~ 246 (402)
T 2aq5_A 181 SVDWSRDGALICTSCR-DKRVRVIEPR-KGT--VVAEKDRPH---EG-------TRPVHAVFVSEGKILTTGFSRMSERQ 246 (402)
T ss_dssp EEEECTTSSCEEEEET-TSEEEEEETT-TTE--EEEEEECSS---CS-------SSCCEEEECSTTEEEEEEECTTCCEE
T ss_pred EEEECCCCCEEEEEec-CCcEEEEeCC-CCc--eeeeeccCC---CC-------CcceEEEEcCCCcEEEEeccCCCCce
Confidence 4689999999988875 7888888764 232 222221111 11 2357899999999998874 35789
Q ss_pred EEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 82 IRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 82 I~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
|.+|++.....+... ..... . ++...++++|||++|+++.
T Consensus 247 i~iwd~~~~~~~~~~--~~~~~--------------------------~----~~v~~~~~s~~~~~l~~~g 286 (402)
T 2aq5_A 247 VALWDTKHLEEPLSL--QELDT--------------------------S----SGVLLPFFDPDTNIVYLCG 286 (402)
T ss_dssp EEEEETTBCSSCSEE--EECCC--------------------------C----SSCEEEEEETTTTEEEEEE
T ss_pred EEEEcCccccCCceE--EeccC--------------------------C----CceeEEEEcCCCCEEEEEE
Confidence 999999543322211 11100 1 1377899999999999887
No 122
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.93 E-value=0.00055 Score=58.61 Aligned_cols=104 Identities=10% Similarity=0.100 Sum_probs=67.7
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
-++|+|+|+++....+ +.+|.+|..+ .+.+...... . .... .....|.+||||++|..+.. .+.|.
T Consensus 21 ~l~~sp~g~~las~~~-D~~i~iw~~~-~~~~~~~~~~--~-~~h~--------~~v~~~~~sp~g~~l~s~s~-D~~v~ 86 (345)
T 3fm0_A 21 FLAWNPAGTLLASCGG-DRRIRIWGTE-GDSWICKSVL--S-EGHQ--------RTVRKVAWSPCGNYLASASF-DATTC 86 (345)
T ss_dssp EEEECTTSSCEEEEET-TSCEEEEEEE-TTEEEEEEEE--C-SSCS--------SCEEEEEECTTSSEEEEEET-TSCEE
T ss_pred EEEECCCCCEEEEEcC-CCeEEEEEcC-CCcceeeeee--c-cccC--------CcEEEEEECCCCCEEEEEEC-CCcEE
Confidence 4789999998877765 7889988764 3443322221 1 1111 44689999999999977764 67899
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++.. ...+.+..+. |.. +..+.++++|||++|+.+.
T Consensus 87 iw~~~~-~~~~~~~~~~-----------------------------~h~--~~v~~v~~sp~~~~l~s~s 124 (345)
T 3fm0_A 87 IWKKNQ-DDFECVTTLE-----------------------------GHE--NEVKSVAWAPSGNLLATCS 124 (345)
T ss_dssp EEEECC-C-EEEEEEEC-----------------------------CCS--SCEEEEEECTTSSEEEEEE
T ss_pred EEEccC-CCeEEEEEcc-----------------------------CCC--CCceEEEEeCCCCEEEEEE
Confidence 999853 2222221111 110 1257899999999988875
No 123
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.93 E-value=0.00032 Score=57.94 Aligned_cols=76 Identities=12% Similarity=0.075 Sum_probs=48.9
Q ss_pred eEEEcC---CCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCC
Q 027522 4 RFLHDP---SKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHG 80 (222)
Q Consensus 4 r~afhP---~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~ 80 (222)
.++|+| +++++++.++ +++|.+|................ .+. ......+.+|||++.+.++.-..+
T Consensus 214 ~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~-----~~~-----~~~v~~~~~~~~~~~~l~~~~~dg 282 (357)
T 3i2n_A 214 SLEFDRKDISMNKLVATSL-EGKFHVFDMRTQHPTKGFASVSE-----KAH-----KSTVWQVRHLPQNRELFLTAGGAG 282 (357)
T ss_dssp EEEESCSSSSCCEEEEEES-TTEEEEEEEEEEETTTEEEEEEE-----ECC-----SSCEEEEEEETTEEEEEEEEETTS
T ss_pred EEEcCCCCCCCCEEEEECC-CCeEEEEeCcCCCcccceeeecc-----CCC-----cCCEEEEEECCCCCcEEEEEeCCC
Confidence 468999 8888888765 77888886531111111111111 111 145789999999996666666788
Q ss_pred cEEEEEecCC
Q 027522 81 DIRQYNIEDP 90 (222)
Q Consensus 81 sI~vf~i~d~ 90 (222)
.|.+|++...
T Consensus 283 ~i~iwd~~~~ 292 (357)
T 3i2n_A 283 GLHLWKYEYP 292 (357)
T ss_dssp EEEEEEEECC
T ss_pred cEEEeecCCC
Confidence 9999999653
No 124
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.93 E-value=0.00018 Score=71.55 Aligned_cols=137 Identities=11% Similarity=0.095 Sum_probs=88.3
Q ss_pred EEEcCCCCeEEEEeccC-ceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 5 FLHDPSKDIGFVGCALA-STMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELs-stV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
+|++|.+.++|+...-. ..|.++..+ |+.. +++ ....+ ..+..|.|+++++.||++.++.+.|.
T Consensus 519 IaVDp~~g~LYwtD~g~~~~I~~~~~d--G~~~--~~l--v~~~l---------~~P~GLavD~~~~~LYwaD~~~~~I~ 583 (791)
T 3m0c_C 519 IVVDPVHGFMYWTDWGTPAKIKKGGLN--GVDI--YSL--VTENI---------QWPNGITLDLLSGRLYWVDSKLHSIS 583 (791)
T ss_dssp EEEETTTTEEEEEECSSSCEEEEEETT--SCCE--EEE--ECSSC---------SCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEecCCCCEEEecCCCCCeEEEEecC--CCce--EEE--EeCCC---------CCceEEEEecCCCeEEEEeCCCCcEE
Confidence 68899999999988544 678888764 4322 111 11111 45799999999999999999999999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCcccccc
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQF 163 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q~ 163 (222)
+++++. ...+.+ +..+ +.. |+-+.|+.++.+||+|+
T Consensus 584 ~~d~dG-~~~~~v--~~~~---------------------------~~l----~~P~glav~~~~lYwtD---------- 619 (791)
T 3m0c_C 584 SIDVNG-GNRKTI--LEDE---------------------------KRL----AHPFSLAVFEDKVFWTD---------- 619 (791)
T ss_dssp EEETTS-CSCEEE--EECT---------------------------TTT----SSEEEEEEETTEEEEEE----------
T ss_pred EEecCC-CceEEE--ecCC---------------------------Ccc----CCCCEEEEeCCEEEEEE----------
Confidence 998843 222221 1110 122 44556666888999999
Q ss_pred ccccccCCcEEEEEEeeCCCCCe--eeccceeEecCCCCCCCcceeeeecC
Q 027522 164 YPELKEKGSHMLQIDVNSEKGGM--AINPNFFVDFEAEPDGPALAHEMRYP 212 (222)
Q Consensus 164 yp~~~s~~~~i~~~dvd~~~G~l--~~~~~f~vdf~~~~~g~~~~h~~r~~ 212 (222)
..+..|.++|. .+|.- .+.. -...|.|=.+.|..|-|
T Consensus 620 -----~~~~~I~~~dk--~tG~~~~~l~~-----~l~~P~~i~v~h~~~Qp 658 (791)
T 3m0c_C 620 -----IINEAIFSANR--LTGSDVNLLAE-----NLLSPEDMVLFHNLTQP 658 (791)
T ss_dssp -----TTTTEEEEEET--TTCCCCEEEEC-----SCSCCCCEEEESGGGSC
T ss_pred -----CCCCEEEEEeC--CCCcceEEeec-----CCCCceeEeeeccccCC
Confidence 46788888854 56643 2221 12345564466766666
No 125
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.92 E-value=0.00037 Score=59.24 Aligned_cols=111 Identities=11% Similarity=0.009 Sum_probs=71.4
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCC--CCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCC----
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQD--GSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWL---- 78 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~--g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRg---- 78 (222)
++++|+|+++||.+-....|.+|..+.. +..+. ... .+ . +..|.+++||+ |||+++.
T Consensus 190 ia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~--~~~-~~------------g-P~gi~~d~~G~-l~va~~~~~~~ 252 (322)
T 2fp8_A 190 AEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEV--LVK-IP------------N-PGNIKRNADGH-FWVSSSEELDG 252 (322)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEE--EEE-CS------------S-EEEEEECTTSC-EEEEEEEETTS
T ss_pred eEECCCCCEEEEEeCCCCeEEEEECCCCcCCccce--EEe-CC------------C-CCCeEECCCCC-EEEEecCcccc
Confidence 6899999999999888899999987521 22221 111 11 3 57899999997 9999987
Q ss_pred ------CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEE
Q 027522 79 ------HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVT 152 (222)
Q Consensus 79 ------h~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~Lyva 152 (222)
++.|.+| ++ .++++..+... .|.. ...|..++. ++.+|||+
T Consensus 253 ~~~~~~~~~v~~~---d~-~G~~~~~~~~~--------------------------~g~~-~~~~~~~~~--~~g~L~v~ 299 (322)
T 2fp8_A 253 NMHGRVDPKGIKF---DE-FGNILEVIPLP--------------------------PPFA-GEHFEQIQE--HDGLLYIG 299 (322)
T ss_dssp STTSCEEEEEEEE---CT-TSCEEEEEECC--------------------------TTTT-TSCCCEEEE--ETTEEEEE
T ss_pred cccCCCccEEEEE---CC-CCCEEEEEECC--------------------------CCCc-cccceEEEE--eCCEEEEe
Confidence 3445555 33 36665555431 0111 113666666 46689999
Q ss_pred eCCCCccccccccccccCCcEEEEEEee
Q 027522 153 NSLFSAWDCQFYPELKEKGSHMLQIDVN 180 (222)
Q Consensus 153 Nsl~~~wd~Q~yp~~~s~~~~i~~~dvd 180 (222)
+ ..+..|.+++.+
T Consensus 300 ~---------------~~~~~i~~~~~~ 312 (322)
T 2fp8_A 300 T---------------LFHGSVGILVYD 312 (322)
T ss_dssp C---------------SSCSEEEEEEC-
T ss_pred e---------------cCCCceEEEecc
Confidence 8 346677777653
No 126
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.92 E-value=0.00059 Score=59.21 Aligned_cols=102 Identities=12% Similarity=0.128 Sum_probs=70.2
Q ss_pred eEEEcCCCCeEEEEec--cCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEe-CCCC
Q 027522 4 RFLHDPSKDIGFVGCA--LASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSN-WLHG 80 (222)
Q Consensus 4 r~afhP~g~~aYvv~E--LsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSn-Rgh~ 80 (222)
.++|+|+++..++.+- .+.+|.+|... +++ ..+.+.. . .....+.+|||+++|+++. ...+
T Consensus 264 ~~~~~p~~~~ll~~~~gs~d~~i~i~d~~-~~~--~~~~~~~-----~--------~~v~~~~~s~~~~~l~~~~g~~dg 327 (401)
T 4aez_A 264 AVAWCPWQSNLLATGGGTMDKQIHFWNAA-TGA--RVNTVDA-----G--------SQVTSLIWSPHSKEIMSTHGFPDN 327 (401)
T ss_dssp EEEECTTSTTEEEEECCTTTCEEEEEETT-TCC--EEEEEEC-----S--------SCEEEEEECSSSSEEEEEECTTTC
T ss_pred EEEECCCCCCEEEEecCCCCCEEEEEECC-CCC--EEEEEeC-----C--------CcEEEEEECCCCCeEEEEeecCCC
Confidence 4789999988888765 78889998764 332 2233321 1 3468999999999999875 3578
Q ss_pred cEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 81 DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 81 sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
.|.+|++.. +++.......+. . +....++++|||++|+++.
T Consensus 328 ~i~v~~~~~---~~~~~~~~~~~h-------------------------~----~~v~~~~~s~dg~~l~s~~ 368 (401)
T 4aez_A 328 NLSIWSYSS---SGLTKQVDIPAH-------------------------D----TRVLYSALSPDGRILSTAA 368 (401)
T ss_dssp EEEEEEEET---TEEEEEEEEECC-------------------------S----SCCCEEEECTTSSEEEEEC
T ss_pred cEEEEecCC---ccceeEEEecCC-------------------------C----CCEEEEEECCCCCEEEEEe
Confidence 999999954 333222222110 1 1267899999999998887
No 127
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.91 E-value=0.00048 Score=62.12 Aligned_cols=104 Identities=9% Similarity=0.082 Sum_probs=70.6
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCe-eEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSW-NHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDI 82 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~-~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI 82 (222)
=++|++....+|+..-....|.++..+..... ....++. ... ..+..|++.+.++.||++..+.+.|
T Consensus 116 ~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~---~~~---------~~p~glavD~~~~~lY~~d~~~~~I 183 (400)
T 3p5b_L 116 ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS---RDI---------QAPDGLAVDWIHSNIYWTDSVLGTV 183 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC---SSC---------SCEEEEEEETTTTEEEEEETTTTEE
T ss_pred EEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe---CCC---------CCcccEEEEecCCceEEEECCCCeE
Confidence 36899999999999998899999876421111 1112221 111 3468999999999999999999999
Q ss_pred EEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 83 RQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 83 ~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
.+++.+. .. ....+.. .... ||.++++|.+.+||+|+
T Consensus 184 ~~~~~~g--~~-~~~l~~~---------------------------~~~~----P~~iavdp~~g~ly~td 220 (400)
T 3p5b_L 184 SVADTKG--VK-RKTLFRE---------------------------NGSK----PRAIVVDPVHGFMYWTD 220 (400)
T ss_dssp EEECTTT--CS-EEEEEEC---------------------------SSCC----EEEEEEETTTTEEEEEE
T ss_pred EEEeCCC--Cc-eEEEEeC---------------------------CCCC----cceEEEecccCeEEEEe
Confidence 8886632 11 1111111 1234 99999999999999998
No 128
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.90 E-value=0.00056 Score=63.08 Aligned_cols=71 Identities=10% Similarity=0.002 Sum_probs=45.9
Q ss_pred EEEcCCCCeEEEEeccC-------ceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeC
Q 027522 5 FLHDPSKDIGFVGCALA-------STMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW 77 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELs-------stV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnR 77 (222)
++|+|||++++....-. ++|+++..+.+|++...+.+.... . .....+..||||+++|++++
T Consensus 193 ~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~---~--------~~~~~~~~spdg~l~~~~~~ 261 (662)
T 3azo_A 193 PRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP---E--------EAIAQAEWAPDGSLIVATDR 261 (662)
T ss_dssp CEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET---T--------BCEEEEEECTTSCEEEEECT
T ss_pred ceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC---C--------ceEcceEECCCCeEEEEECC
Confidence 57999999887776543 578888875456543333332210 1 23478899999997767766
Q ss_pred CCCcEEEEEe
Q 027522 78 LHGDIRQYNI 87 (222)
Q Consensus 78 gh~sI~vf~i 87 (222)
.+.+.+|.+
T Consensus 262 -~~~~~l~~~ 270 (662)
T 3azo_A 262 -TGWWNLHRV 270 (662)
T ss_dssp -TSSCEEEEE
T ss_pred -CCCeEEEEE
Confidence 455556666
No 129
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.89 E-value=0.0008 Score=56.95 Aligned_cols=105 Identities=10% Similarity=0.170 Sum_probs=67.0
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|+|+|+++....+ +.+|.+|... .+ +....+... .....+.+|||+++|.++. .+.|.
T Consensus 201 ~~~~sp~g~~l~s~~~-dg~i~iwd~~-~~--~~~~~~~~~-------------~~v~~~~~sp~~~~la~~~--~~~i~ 261 (319)
T 3frx_A 201 TLTASPDGTLIASAGK-DGEIMLWNLA-AK--KAMYTLSAQ-------------DEVFSLAFSPNRYWLAAAT--ATGIK 261 (319)
T ss_dssp EEEECTTSSEEEEEET-TCEEEEEETT-TT--EEEEEEECC-------------SCEEEEEECSSSSEEEEEE--TTEEE
T ss_pred EEEEcCCCCEEEEEeC-CCeEEEEECC-CC--cEEEEecCC-------------CcEEEEEEcCCCCEEEEEc--CCCcE
Confidence 4789999998887776 7889888764 22 222222211 3357899999999998886 46699
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|+++. ..++..+... + ... .+...+....+++||||++|+++.
T Consensus 262 v~~~~~---~~~~~~~~~~--~-----------------~~~----~~~~~~~v~~~~~spdg~~l~sg~ 305 (319)
T 3frx_A 262 VFSLDP---QYLVDDLRPE--F-----------------AGY----SKAAEPHAVSLAWSADGQTLFAGY 305 (319)
T ss_dssp EEEETT---EEEEEEECCC--C-----------------TTC----CGGGCCCEEEEEECTTSSEEEEEE
T ss_pred EEEeCc---CeeeeccCcc--c-----------------ccc----ccCcCcceeEEEECCCCCEEEEee
Confidence 999943 3343322210 0 000 000111256799999999999887
No 130
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.88 E-value=0.00075 Score=57.57 Aligned_cols=99 Identities=16% Similarity=0.186 Sum_probs=66.9
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|+|+++++.+... +.+|.+|... .++. ...+... + .....+.+||||++|.++.. .+.|.
T Consensus 127 ~~~~spdg~~l~~g~~-dg~v~i~~~~-~~~~--~~~~~~~-----~-------~~v~~~~~spdg~~lasg~~-dg~i~ 189 (321)
T 3ow8_A 127 TLAFSPDSQYLATGTH-VGKVNIFGVE-SGKK--EYSLDTR-----G-------KFILSIAYSPDGKYLASGAI-DGIIN 189 (321)
T ss_dssp CEEECTTSSEEEEECT-TSEEEEEETT-TCSE--EEEEECS-----S-------SCEEEEEECTTSSEEEEEET-TSCEE
T ss_pred EEEECCCCCEEEEEcC-CCcEEEEEcC-CCce--eEEecCC-----C-------ceEEEEEECCCCCEEEEEcC-CCeEE
Confidence 3789999998877665 6788888764 3322 1222111 1 34688999999999987764 67999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++.. ++++..+.. . .. ..+.++++|||++|+.+.
T Consensus 190 iwd~~~---~~~~~~~~~--h-------------------------~~----~v~~l~~spd~~~l~s~s 225 (321)
T 3ow8_A 190 IFDIAT---GKLLHTLEG--H-------------------------AM----PIRSLTFSPDSQLLVTAS 225 (321)
T ss_dssp EEETTT---TEEEEEECC--C-------------------------SS----CCCEEEECTTSCEEEEEC
T ss_pred EEECCC---CcEEEEEcc--c-------------------------CC----ceeEEEEcCCCCEEEEEc
Confidence 999843 555433221 0 11 157899999999998876
No 131
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.86 E-value=0.001 Score=55.30 Aligned_cols=72 Identities=11% Similarity=0.062 Sum_probs=51.0
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|+|+++++++.++ +++|.+|..+....+...+.+.. ... .....|.++||+++|+++.. .+.|.
T Consensus 101 ~~~~~~~~~~l~~~~~-d~~v~i~d~~~~~~~~~~~~~~~---~~~--------~~i~~~~~~~~~~~l~~~~~-dg~i~ 167 (372)
T 1k8k_C 101 CVRWAPNEKKFAVGSG-SRVISICYFEQENDWWVCKHIKK---PIR--------STVLSLDWHPNSVLLAAGSC-DFKCR 167 (372)
T ss_dssp EEEECTTSSEEEEEET-TSSEEEEEEETTTTEEEEEEECT---TCC--------SCEEEEEECTTSSEEEEEET-TSCEE
T ss_pred EEEECCCCCEEEEEeC-CCEEEEEEecCCCcceeeeeeec---ccC--------CCeeEEEEcCCCCEEEEEcC-CCCEE
Confidence 4789999999888876 67888887753333433332211 111 45689999999999988774 67899
Q ss_pred EEEec
Q 027522 84 QYNIE 88 (222)
Q Consensus 84 vf~i~ 88 (222)
+|++.
T Consensus 168 ~~d~~ 172 (372)
T 1k8k_C 168 IFSAY 172 (372)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 99974
No 132
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.86 E-value=0.0014 Score=55.03 Aligned_cols=111 Identities=14% Similarity=0.121 Sum_probs=67.3
Q ss_pred eEEEcCCCC-eEEEEeccCceEEEEEe----CCCCC--eeEEEEEEecCcccccc-cCCCCCCceeEEEEcCCCCEEEEE
Q 027522 4 RFLHDPSKD-IGFVGCALASTMVRFSK----TQDGS--WNHEVAISVKSLKVQNW-ILPEMPGLITDFLISLDDRFLYFS 75 (222)
Q Consensus 4 r~afhP~g~-~aYvv~ELsstV~~~~~----d~~g~--~~~~q~is~~p~~~~g~-~~~~~~~~~adI~iSpDgrfLYvS 75 (222)
.++|+|+++ ++++.+. +.+|.+|.. . +++ |.......+.. .+.+. ...........|.+||||++|+++
T Consensus 50 ~~~~s~~~~~~l~~~~~-dg~i~iw~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 126 (425)
T 1r5m_A 50 SSTWNPLDESILAYGEK-NSVARLARIVETDQ-EGKKYWKLTIIAELRH-PFALSASSGKTTNQVTCLAWSHDGNSIVTG 126 (425)
T ss_dssp EEEECSSCTTEEEEEET-BTEEEEEEEEEC-------CEEEEEEEEEEC-CCCCC------CBCEEEEEECTTSSEEEEE
T ss_pred EEEECCCCCcEEEEecC-CceEEEEEEecccC-Cccccccccccccccc-cccccccccCCCCceEEEEEcCCCCEEEEE
Confidence 478999999 7777664 788888877 4 333 33333322221 11110 000011357899999999999888
Q ss_pred eCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 76 NWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 76 nRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
.. .+.|.+|+. +++.+..+... .. ....++++|+|++|+++.
T Consensus 127 ~~-dg~i~i~~~----~~~~~~~~~~~---------------------------~~----~v~~~~~~~~~~~l~~~~ 168 (425)
T 1r5m_A 127 VE-NGELRLWNK----TGALLNVLNFH---------------------------RA----PIVSVKWNKDGTHIISMD 168 (425)
T ss_dssp ET-TSCEEEEET----TSCEEEEECCC---------------------------CS----CEEEEEECTTSSEEEEEE
T ss_pred eC-CCeEEEEeC----CCCeeeeccCC---------------------------Cc----cEEEEEECCCCCEEEEEe
Confidence 75 578999983 23343322210 11 267899999999999886
No 133
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.86 E-value=0.00028 Score=62.59 Aligned_cols=67 Identities=3% Similarity=-0.072 Sum_probs=45.7
Q ss_pred eEEEcCC---CCeEEEEecc-------CceEEEEEeCC-CCCeeEEEEE-EecCcccccccCCCCCCceeEEEEcCCCCE
Q 027522 4 RFLHDPS---KDIGFVGCAL-------ASTMVRFSKTQ-DGSWNHEVAI-SVKSLKVQNWILPEMPGLITDFLISLDDRF 71 (222)
Q Consensus 4 r~afhP~---g~~aYvv~EL-------sstV~~~~~d~-~g~~~~~q~i-s~~p~~~~g~~~~~~~~~~adI~iSpDgrf 71 (222)
-++|||+ ..++||...- .+.|.++..+. ++++...+++ +..|....+. ..+..|.++||| +
T Consensus 70 gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~------h~~~~l~~~pdG-~ 142 (353)
T 2g8s_A 70 DVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGN------HFGGRLVFDGKG-Y 142 (353)
T ss_dssp EEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSS------CCCCCEEECSSS-E
T ss_pred eEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCc------ccCccEEECCCC-c
Confidence 5799998 8999999764 46799998863 3566655554 3333211111 234789999999 8
Q ss_pred EEEEeC
Q 027522 72 LYFSNW 77 (222)
Q Consensus 72 LYvSnR 77 (222)
||++.-
T Consensus 143 Lyv~~G 148 (353)
T 2g8s_A 143 LFIALG 148 (353)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 999973
No 134
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.83 E-value=0.0028 Score=51.14 Aligned_cols=72 Identities=7% Similarity=0.080 Sum_probs=51.6
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCC-CCCeeEEEEEEecCcccccccCCCCCCceeEEEEcC--CCCEEEEEeCCCC
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQ-DGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISL--DDRFLYFSNWLHG 80 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~-~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSp--DgrfLYvSnRgh~ 80 (222)
.++|+|+++++.+.++ +.+|.+|..+. ...+.....+.-. . .....|.++| |+++|+++.. .+
T Consensus 16 ~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~----~--------~~v~~~~~~~~~d~~~l~s~~~-dg 81 (351)
T 3f3f_A 16 DVVYDFYGRHVATCSS-DQHIKVFKLDKDTSNWELSDSWRAH----D--------SSIVAIDWASPEYGRIIASASY-DK 81 (351)
T ss_dssp EEEECSSSSEEEEEET-TSEEEEEEECSSSCCEEEEEEEECC----S--------SCEEEEEECCGGGCSEEEEEET-TS
T ss_pred EEEEcCCCCEEEEeeC-CCeEEEEECCCCCCcceecceeccC----C--------CcEEEEEEcCCCCCCEEEEEcC-CC
Confidence 4789999999888775 78899998752 3333333332211 1 4468999999 7999987775 67
Q ss_pred cEEEEEecC
Q 027522 81 DIRQYNIED 89 (222)
Q Consensus 81 sI~vf~i~d 89 (222)
.|.+|++..
T Consensus 82 ~v~vwd~~~ 90 (351)
T 3f3f_A 82 TVKLWEEDP 90 (351)
T ss_dssp CEEEEEECT
T ss_pred eEEEEecCC
Confidence 899999954
No 135
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.83 E-value=0.00051 Score=64.20 Aligned_cols=99 Identities=7% Similarity=-0.045 Sum_probs=70.3
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
-++|||+++++.+..+ +++|.+|... +|+ ..+.+.... .....+.+||||++|.++.. .+.|.
T Consensus 18 ~i~~sp~~~~la~~~~-~g~v~iwd~~-~~~--~~~~~~~~~------------~~v~~~~~s~~~~~l~~~~~-dg~i~ 80 (814)
T 3mkq_A 18 GIDFHPTEPWVLTTLY-SGRVEIWNYE-TQV--EVRSIQVTE------------TPVRAGKFIARKNWIIVGSD-DFRIR 80 (814)
T ss_dssp EEEECSSSSEEEEEET-TSEEEEEETT-TTE--EEEEEECCS------------SCEEEEEEEGGGTEEEEEET-TSEEE
T ss_pred EEEECCCCCEEEEEeC-CCEEEEEECC-CCc--eEEEEecCC------------CcEEEEEEeCCCCEEEEEeC-CCeEE
Confidence 4789999999999886 7789998764 342 233333211 34689999999999988875 78999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++.. ++.+...... .. ..+.++++|||++|+++.
T Consensus 81 vw~~~~---~~~~~~~~~~---------------------------~~----~v~~~~~s~~~~~l~~~~ 116 (814)
T 3mkq_A 81 VFNYNT---GEKVVDFEAH---------------------------PD----YIRSIAVHPTKPYVLSGS 116 (814)
T ss_dssp EEETTT---CCEEEEEECC---------------------------SS----CEEEEEECSSSSEEEEEE
T ss_pred EEECCC---CcEEEEEecC---------------------------CC----CEEEEEEeCCCCEEEEEc
Confidence 999843 4443333210 11 268899999999998876
No 136
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.82 E-value=0.00041 Score=60.42 Aligned_cols=99 Identities=10% Similarity=0.113 Sum_probs=63.9
Q ss_pred EEEcCCCCeEEEEec-cCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 5 FLHDPSKDIGFVGCA-LASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~E-LsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.+|+|||+++.+..- .+++|.+|... +++ .+..+.. . ....+|.+||||++|..+. .+.+.
T Consensus 139 v~fSpDg~~la~as~~~d~~i~iwd~~-~~~--~~~~~~~-----~--------~~V~~v~fspdg~~l~s~s--~~~~~ 200 (365)
T 4h5i_A 139 VYISREGTVAAIASSKVPAIMRIIDPS-DLT--EKFEIET-----R--------GEVKDLHFSTDGKVVAYIT--GSSLE 200 (365)
T ss_dssp EEECTTSSCEEEEESCSSCEEEEEETT-TTE--EEEEEEC-----S--------SCCCEEEECTTSSEEEEEC--SSCEE
T ss_pred EEEcCCCCEEEEEECCCCCEEEEeECC-CCc--EEEEeCC-----C--------CceEEEEEccCCceEEecc--ceeEE
Confidence 579999999887654 57888888763 332 2222211 1 2357899999999998775 56788
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|.... ++.+......+ .+.. .+.++++|||++|+++.
T Consensus 201 ~~~~~~---~~~~~~~~~~~-------------------------~~~~----v~~v~fspdg~~l~~~s 238 (365)
T 4h5i_A 201 VISTVT---GSCIARKTDFD-------------------------KNWS----LSKINFIADDTVLIAAS 238 (365)
T ss_dssp EEETTT---CCEEEEECCCC-------------------------TTEE----EEEEEEEETTEEEEEEE
T ss_pred EEEecc---CcceeeeecCC-------------------------CCCC----EEEEEEcCCCCEEEEEe
Confidence 887643 22211111100 1122 57899999999999886
No 137
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.80 E-value=0.00014 Score=64.17 Aligned_cols=104 Identities=6% Similarity=0.042 Sum_probs=68.9
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++|+|++...++.+--+.+|.+|.............+... . ..+..|.+||+++++++++-..+.|.+
T Consensus 237 v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~----~--------~~v~~i~~~p~~~~~l~tg~~dg~v~v 304 (430)
T 2xyi_A 237 VAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH----T--------AEVNCLSFNPYSEFILATGSADKTVAL 304 (430)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC----S--------SCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred eEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC----C--------CCeEEEEeCCCCCCEEEEEeCCCeEEE
Confidence 6789976666666666889999977532212222222211 1 346899999999999988888999999
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
|++.....+.. .+... . +....++++|+|++|++++
T Consensus 305 wd~~~~~~~~~--~~~~h---------------------------~----~~v~~i~~sp~~~~~l~s~ 340 (430)
T 2xyi_A 305 WDLRNLKLKLH--SFESH---------------------------K----DEIFQVQWSPHNETILASS 340 (430)
T ss_dssp EETTCTTSCSE--EEECC---------------------------S----SCEEEEEECSSCTTEEEEE
T ss_pred EeCCCCCCCeE--EeecC---------------------------C----CCEEEEEECCCCCCEEEEE
Confidence 99954332211 11110 1 1267899999999888887
No 138
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.80 E-value=2.2e-05 Score=76.34 Aligned_cols=104 Identities=10% Similarity=0.083 Sum_probs=69.5
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++|++.+..+|+.......|.++..+.. ........+....+ ..+..|++++.++.||+++.+.+.|.+
T Consensus 411 la~d~~~~~Ly~sD~~~~~I~~~~~~g~--~~~~~~~~~i~~~~---------~~P~glavD~~~g~LY~tD~~~~~I~v 479 (699)
T 1n7d_A 411 LDTEVASNRIYWSDLSQRMICSTQLDRA--HGVSSYDTVISRDI---------QAPDGLAVDWIHSNIYWTDSVLGTVSV 479 (699)
T ss_dssp CEEETTTTEEEECCTTTTSBEEEESCCC--CC-CCCCCBCCSCC-----------CCCEECCCSSSBCEECCTTTSCEEE
T ss_pred EccccccCeEEEEecCCCeEEEEecCCC--CCCcceEEEEeCCC---------CCcceEEEEeeCCcEEEEeccCCeEEE
Confidence 5789999999999999999999976421 00000111111111 235789999999999999999999988
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
++.+. ... ..+.. .+... |+.++++|++++||+|+
T Consensus 480 ~d~dg---~~~-~~l~~--------------------------~~~~~----P~giavDp~~g~ly~td 514 (699)
T 1n7d_A 480 ADTKG---VKR-KTLFR--------------------------EQGSK----PRAIVVDPVHGFMYWTD 514 (699)
T ss_dssp EBSSS---CCE-EEECC--------------------------CSSCC----CCCEECCSSSSCCEECC
T ss_pred EecCC---Cce-EEEEe--------------------------CCCCC----cceEEEccCCCcEEEcc
Confidence 87632 111 11111 01233 99999999999999998
No 139
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.78 E-value=0.0007 Score=62.71 Aligned_cols=112 Identities=18% Similarity=0.278 Sum_probs=66.6
Q ss_pred eEEEcCCCCeEEEEeccCc-eEEEEEeCCCCCeeEEEEEEecCccc---ccccCCCCCCceeEEEEcCC---CCEEEEEe
Q 027522 4 RFLHDPSKDIGFVGCALAS-TMVRFSKTQDGSWNHEVAISVKSLKV---QNWILPEMPGLITDFLISLD---DRFLYFSN 76 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELss-tV~~~~~d~~g~~~~~q~is~~p~~~---~g~~~~~~~~~~adI~iSpD---grfLYvSn 76 (222)
=++|.|+|+ +|| +|... .|.++.. .+|+.+ .+..++ ..+ .+. ...-+|+++|| +++|||+.
T Consensus 31 ~~a~~pdG~-l~V-~e~~gg~I~~~~~-~~g~~~--~~~~~~-~~~~~~~g~------~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 31 ALLWGPDNQ-IWL-TERATGKILRVNP-ESGSVK--TVFQVP-EIVNDADGQ------NGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp EEEECTTSC-EEE-EETTTCEEEEECT-TTCCEE--EEEECT-TCCCCTTSS------CSEEEEEECTTTTTSCEEEEEE
T ss_pred EEEEcCCCc-EEE-EEcCCCEEEEEEC-CCCcEe--EEecCC-ccccccCCC------CceeEEEECCCcCcCCEEEEEE
Confidence 378999997 555 46664 6888854 245543 222333 211 112 34579999999 99999998
Q ss_pred CC------------CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECC
Q 027522 77 WL------------HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSL 144 (222)
Q Consensus 77 Rg------------h~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lsp 144 (222)
.. ...|..|+.++ ...++.....+ +. ..|. .+.| .+..|+++|
T Consensus 99 s~~~~~~~~~~~~~~~~v~r~~~~~-~~~~~~~~~~i------------~~-----~~p~----~~~H---~~~~l~f~p 153 (454)
T 1cru_A 99 TFKNPKSTDKELPNQTIIRRYTYNK-STDTLEKPVDL------------LA-----GLPS----SKDH---QSGRLVIGP 153 (454)
T ss_dssp EEECTTC--CCSCEEEEEEEEEEET-TTTEEEEEEEE------------EE-----EECC----CSSC---CEEEEEECT
T ss_pred eccccCCCccccccccEEEEEEECC-CCCCcCCcEEE------------EE-----cCCC----CCCC---CCCeEeECC
Confidence 53 34688887753 34455221111 00 0111 1222 488999999
Q ss_pred CCCEEEEEe
Q 027522 145 DGKRLYVTN 153 (222)
Q Consensus 145 dGk~LyvaN 153 (222)
||+ |||+.
T Consensus 154 DG~-Lyv~~ 161 (454)
T 1cru_A 154 DQK-IYYTI 161 (454)
T ss_dssp TSC-EEEEE
T ss_pred CCe-EEEEE
Confidence 996 99985
No 140
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.78 E-value=0.00084 Score=57.26 Aligned_cols=99 Identities=15% Similarity=0.180 Sum_probs=66.0
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|+|+++++.+.++ +.+|.+|... +++ ..+.+. +.. .....|.+|||+++|..+. ..+.|.
T Consensus 169 ~~~~spdg~~lasg~~-dg~i~iwd~~-~~~--~~~~~~-------~h~-----~~v~~l~~spd~~~l~s~s-~dg~i~ 231 (321)
T 3ow8_A 169 SIAYSPDGKYLASGAI-DGIINIFDIA-TGK--LLHTLE-------GHA-----MPIRSLTFSPDSQLLVTAS-DDGYIK 231 (321)
T ss_dssp EEEECTTSSEEEEEET-TSCEEEEETT-TTE--EEEEEC-------CCS-----SCCCEEEECTTSCEEEEEC-TTSCEE
T ss_pred EEEECCCCCEEEEEcC-CCeEEEEECC-CCc--EEEEEc-------ccC-----CceeEEEEcCCCCEEEEEc-CCCeEE
Confidence 4789999999887765 7788888763 342 222221 110 3357899999999997665 467899
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++.. ++++..+.. .. +....++++|||++|+.+.
T Consensus 232 iwd~~~---~~~~~~~~~-----------------------------h~--~~v~~~~~sp~~~~l~s~s 267 (321)
T 3ow8_A 232 IYDVQH---ANLAGTLSG-----------------------------HA--SWVLNVAFCPDDTHFVSSS 267 (321)
T ss_dssp EEETTT---CCEEEEECC-----------------------------CS--SCEEEEEECTTSSEEEEEE
T ss_pred EEECCC---cceeEEEcC-----------------------------CC--CceEEEEECCCCCEEEEEe
Confidence 999853 334322211 10 1257899999999988876
No 141
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.77 E-value=0.0004 Score=58.52 Aligned_cols=36 Identities=14% Similarity=0.121 Sum_probs=24.6
Q ss_pred CeeEEECCCCCEEEEEeCCCCccccccccccccCCcEEEEEEeeCCCCCee
Q 027522 137 PQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 187 (222)
Q Consensus 137 Pr~~~lspdGk~LyvaNsl~~~wd~Q~yp~~~s~~~~i~~~dvd~~~G~l~ 187 (222)
...+++||||++|+.+. .. .....++.+|+ .+|..+
T Consensus 353 ~~~~~~s~dg~~l~~~s--------~~-----~~~~~l~~~~~--~~~~~~ 388 (396)
T 3c5m_A 353 HPHPSFTPNDDGVLFTS--------DF-----EGVPAIYIADV--PESYKH 388 (396)
T ss_dssp CCCCEECTTSSEEEEEE--------CT-----TSSCEEEEEEC--CTTCC-
T ss_pred CCCceEccCCCeEEEEe--------cC-----CCCceEEEEEE--cccccc
Confidence 45678999999999887 32 23556787765 556554
No 142
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.75 E-value=0.00068 Score=57.53 Aligned_cols=70 Identities=1% Similarity=-0.001 Sum_probs=48.9
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|||+++++.+.++ +++|.+|... +++... . .+. .... .....|.+||||++|.++. .+.|.
T Consensus 175 ~~~~~pdg~~lasg~~-dg~i~iwd~~-~~~~~~-~--~~~-~~h~--------~~v~~l~fs~~g~~l~s~~--~~~v~ 238 (343)
T 3lrv_A 175 SGVLHKDSLLLALYSP-DGILDVYNLS-SPDQAS-S--RFP-VDEE--------AKIKEVKFADNGYWMVVEC--DQTVV 238 (343)
T ss_dssp EEEECTTSCEEEEECT-TSCEEEEESS-CTTSCC-E--ECC-CCTT--------SCEEEEEECTTSSEEEEEE--SSBEE
T ss_pred EEEECCCCCEEEEEcC-CCEEEEEECC-CCCCCc-c--EEe-ccCC--------CCEEEEEEeCCCCEEEEEe--CCeEE
Confidence 4689999998887765 7889988764 332210 1 111 1011 4578999999999999988 45999
Q ss_pred EEEecC
Q 027522 84 QYNIED 89 (222)
Q Consensus 84 vf~i~d 89 (222)
+|++..
T Consensus 239 iwd~~~ 244 (343)
T 3lrv_A 239 CFDLRK 244 (343)
T ss_dssp EEETTS
T ss_pred EEEcCC
Confidence 999954
No 143
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.75 E-value=0.00053 Score=66.09 Aligned_cols=100 Identities=10% Similarity=0.155 Sum_probs=71.0
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCC--cE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHG--DI 82 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~--sI 82 (222)
+|+++.++.+|+.+....+|.++..+ |+.. .++-. .. - ..+.+|++.|...+||++.|+.. .|
T Consensus 394 lAvD~~~~nLY~td~~~~~I~v~~~~--G~~~--~~l~~--~~---l------~~Pr~iavdp~~g~ly~tD~g~~~~~I 458 (628)
T 4a0p_A 394 LSIDIYSRYIYWTCEATNVINVTRLD--GRSV--GVVLK--GE---Q------DRPRAVVVNPEKGYMYFTNLQERSPKI 458 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETT--SCEE--EEEEE--CT---T------CCEEEEEEETTTTEEEEEEEETTEEEE
T ss_pred EEeeccCCeEEEEcCCCCEEEEEECC--CCeE--EEEEe--CC---C------CceeeEEEecCCCeEEEeecCCCCCeE
Confidence 67888899999999999999999864 5532 22211 11 1 45799999999999999999876 57
Q ss_pred EEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 83 RQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 83 ~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
.+++.+. ...+. +-.. .-.+ |+-+++++++++||+|+
T Consensus 459 ~r~~~dG-~~~~~---l~~~--------------------------~l~~----P~gla~D~~~~~LYw~D 495 (628)
T 4a0p_A 459 ERAALDG-TEREV---LFFS--------------------------GLSK----PIALALDSRLGKLFWAD 495 (628)
T ss_dssp EEEETTS-CSCEE---EECS--------------------------SCSC----EEEEEEETTTTEEEEEE
T ss_pred EEEeCCC-CCcEE---EEec--------------------------cCCC----ccEEEEeCCCCEEEEEe
Confidence 7666632 11221 1110 0123 99999999999999999
No 144
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.74 E-value=0.00038 Score=61.62 Aligned_cols=65 Identities=11% Similarity=0.082 Sum_probs=43.8
Q ss_pred EEEcCC---CCeEEEEeccC-----ceEEEEEeCCCCCeeEEEEE-EecCcccccccCCCCCCceeEEEEcCCCCEEEEE
Q 027522 5 FLHDPS---KDIGFVGCALA-----STMVRFSKTQDGSWNHEVAI-SVKSLKVQNWILPEMPGLITDFLISLDDRFLYFS 75 (222)
Q Consensus 5 ~afhP~---g~~aYvv~ELs-----stV~~~~~d~~g~~~~~q~i-s~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvS 75 (222)
++|||+ ++++||.+.-. +.|.++..+ ++++...+++ +-.|....+. ..+..|.++||| +||++
T Consensus 80 ia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~-~~~~~~~~~l~~~~p~~~~~~------h~~~~l~~~pdG-~Lyv~ 151 (352)
T 2ism_A 80 LALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHL-GERGVLDRVVLDGIPARPHGL------HSGGRIAFGPDG-MLYVT 151 (352)
T ss_dssp EEECTTTTTSCEEEEEEEECTTSSEEEEEEEEEC-SSCEEEEEEEEEEECCCTTCC------CCCCCEEECTTS-CEEEE
T ss_pred EEECCCCCCCCEEEEEEecCCCCCccEEEEEEeC-CCCcCceEEEEEeCCCCCCCC------cCCceEEECCCC-CEEEE
Confidence 689999 89999998754 779999875 3455544443 3222100111 234799999999 79999
Q ss_pred eC
Q 027522 76 NW 77 (222)
Q Consensus 76 nR 77 (222)
.-
T Consensus 152 ~G 153 (352)
T 2ism_A 152 TG 153 (352)
T ss_dssp CC
T ss_pred EC
Confidence 74
No 145
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.73 E-value=0.0029 Score=52.01 Aligned_cols=100 Identities=10% Similarity=0.088 Sum_probs=66.4
Q ss_pred eEEEcCC---CCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCC
Q 027522 4 RFLHDPS---KDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHG 80 (222)
Q Consensus 4 r~afhP~---g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~ 80 (222)
.++|+|+ |+++++.++ +.+|.+|..+..+. .....+... . .....|.+|||+++|+++.. .+
T Consensus 44 ~~~~~~~~~~g~~l~~~~~-dg~i~iw~~~~~~~-~~~~~~~~h----~--------~~v~~~~~~~~~~~l~s~~~-dg 108 (368)
T 3mmy_A 44 CLSFSPPTLPGNFLIAGSW-ANDVRCWEVQDSGQ-TIPKAQQMH----T--------GPVLDVCWSDDGSKVFTASC-DK 108 (368)
T ss_dssp EEEECCTTSSSEEEEEEET-TSEEEEEEECTTSC-EEEEEEEEC----S--------SCEEEEEECTTSSEEEEEET-TS
T ss_pred EEEEcCCCCCceEEEEECC-CCcEEEEEcCCCCc-eeEEEeccc----c--------CCEEEEEECcCCCEEEEEcC-CC
Confidence 4789999 577777765 78899998753232 222222211 1 44689999999999987764 67
Q ss_pred cEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEE--CCCCCEEEEEe
Q 027522 81 DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQL--SLDGKRLYVTN 153 (222)
Q Consensus 81 sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~l--spdGk~LyvaN 153 (222)
.|.+|++.. .+++..... .. ..+.+++ +|+|++|+++.
T Consensus 109 ~v~iwd~~~---~~~~~~~~~----------------------------~~----~v~~~~~~~~~~~~~l~~~~ 148 (368)
T 3mmy_A 109 TAKMWDLSS---NQAIQIAQH----------------------------DA----PVKTIHWIKAPNYSCVMTGS 148 (368)
T ss_dssp EEEEEETTT---TEEEEEEEC----------------------------SS----CEEEEEEEECSSCEEEEEEE
T ss_pred cEEEEEcCC---CCceeeccc----------------------------cC----ceEEEEEEeCCCCCEEEEcc
Confidence 899999853 334221111 11 1567888 99999988886
No 146
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.73 E-value=0.0012 Score=55.28 Aligned_cols=107 Identities=7% Similarity=-0.008 Sum_probs=70.9
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|||+++++....+ +.+|.+|... ++. ..+.+.... .....+.++||+++|.++.. .+.|+
T Consensus 18 ~~~fsp~~~~l~s~~~-dg~v~lWd~~-~~~--~~~~~~~~~------------~~v~~~~~~~~~~~l~s~s~-d~~i~ 80 (304)
T 2ynn_A 18 GIDFHPTEPWVLTTLY-SGRVELWNYE-TQV--EVRSIQVTE------------TPVRAGKFIARKNWIIVGSD-DFRIR 80 (304)
T ss_dssp EEEECSSSSEEEEEET-TSEEEEEETT-TTE--EEEEEECCS------------SCEEEEEEEGGGTEEEEEET-TSEEE
T ss_pred EEEECCCCCEEEEEcC-CCcEEEEECC-CCc--eeEEeeccC------------CcEEEEEEeCCCCEEEEECC-CCEEE
Confidence 4789999999988775 7899999774 332 223322211 33578999999999987774 67999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe--CCCCcccc
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN--SLFSAWDC 161 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN--sl~~~wd~ 161 (222)
+|++.. ++.+..+.. . .. .-+.++++|+|++|+.+. .-..-||-
T Consensus 81 vwd~~~---~~~~~~~~~--h-------------------------~~----~v~~~~~~~~~~~l~sgs~D~~v~lWd~ 126 (304)
T 2ynn_A 81 VFNYNT---GEKVVDFEA--H-------------------------PD----YIRSIAVHPTKPYVLSGSDDLTVKLWNW 126 (304)
T ss_dssp EEETTT---CCEEEEEEC--C-------------------------SS----CEEEEEECSSSSEEEEEETTSCEEEEEG
T ss_pred EEECCC---CcEEEEEeC--C-------------------------CC----cEEEEEEcCCCCEEEEECCCCeEEEEEC
Confidence 999843 334322221 0 01 157899999999988774 22334653
No 147
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.73 E-value=0.00045 Score=64.18 Aligned_cols=102 Identities=17% Similarity=0.105 Sum_probs=64.9
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++|+|+|+++.+.++ +++|.+|..+ .+.+...+. . ... .....|.+||||++|..+. ..+.|.+
T Consensus 454 va~spdg~~lasgs~-D~~v~lwd~~-~~~~~~~~~--~---~h~--------~~v~~v~fspdg~~las~s-~d~~v~~ 517 (611)
T 1nr0_A 454 VALSNDKQFVAVGGQ-DSKVHVYKLS-GASVSEVKT--I---VHP--------AEITSVAFSNNGAFLVATD-QSRKVIP 517 (611)
T ss_dssp EEECTTSCEEEEEET-TSEEEEEEEE-TTEEEEEEE--E---ECS--------SCEEEEEECTTSSEEEEEE-TTSCEEE
T ss_pred EEEeCCCCEEEEeCC-CCeEEEEEcc-CCceeeeec--c---CCC--------CceEEEEECCCCCEEEEEc-CCCCEEE
Confidence 578888888877776 6778777663 233322221 1 111 4468999999999997666 4678999
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
|++... +++......+ +. .+....+++||||++|..+.
T Consensus 518 w~~~~~--~~~~~~~~~~---------------------------~H--~~~V~~v~fspdg~~lasgs 555 (611)
T 1nr0_A 518 YSVANN--FELAHTNSWT---------------------------FH--TAKVACVSWSPDNVRLATGS 555 (611)
T ss_dssp EEGGGT--TEESCCCCCC---------------------------CC--SSCEEEEEECTTSSEEEEEE
T ss_pred EEcCCC--Cceeeeeeee---------------------------ec--ccceeEEEECCCCCEEEEEE
Confidence 998542 3331100000 00 11267899999999998876
No 148
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.73 E-value=0.00034 Score=61.36 Aligned_cols=101 Identities=11% Similarity=0.049 Sum_probs=70.4
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
+.|++....+|+..-.+..|.++..+ |......++.. +- ..+..|++.+.++.||++..+.+.|.+
T Consensus 40 ld~d~~~~~lyw~D~~~~~I~r~~~~--g~~~~~~~~~~------~l------~~p~glavd~~~g~ly~~d~~~~~I~~ 105 (318)
T 3sov_A 40 VDFVFSHGLIYWSDVSEEAIKRTEFN--KTESVQNVVVS------GL------LSPDGLACDWLGEKLYWTDSETNRIEV 105 (318)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEETT--SSSCCCEEEEE------CC------SCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEeCCCEEEEEECCCCcEEEEEcc--CCCceEEEEcC------CC------CCccEEEEEcCCCeEEEEECCCCEEEE
Confidence 57888888999999888889988764 22111111111 11 235789999999999999999999999
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
++.+. ...+. +... .... |+.++++|.+.+||+++
T Consensus 106 ~~~dG-~~~~~---l~~~--------------------------~~~~----P~giavdp~~g~ly~td 140 (318)
T 3sov_A 106 SNLDG-SLRKV---LFWQ--------------------------ELDQ----PRAIALDPSSGFMYWTD 140 (318)
T ss_dssp EETTS-CSCEE---EECS--------------------------SCSS----EEEEEEEGGGTEEEEEE
T ss_pred EECCC-CcEEE---EEeC--------------------------CCCC----ccEEEEeCCCCEEEEEe
Confidence 98742 22222 1110 1233 99999999999999998
No 149
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.73 E-value=0.0019 Score=53.01 Aligned_cols=105 Identities=12% Similarity=0.224 Sum_probs=65.1
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++|+|+++++++.++ +.+|.+|.... + .....+. +. .....+.+||++++|-++. .+.|.+
T Consensus 221 ~~~s~~~~~l~s~s~-Dg~i~iwd~~~-~--~~~~~~~-------~~------~~v~~~~~~~~~~~~~~~~--d~~i~i 281 (340)
T 4aow_A 221 VTVSPDGSLCASGGK-DGQAMLWDLNE-G--KHLYTLD-------GG------DIINALCFSPNRYWLCAAT--GPSIKI 281 (340)
T ss_dssp EEECTTSSEEEEEET-TCEEEEEETTT-T--EEEEEEE-------CS------SCEEEEEECSSSSEEEEEE--TTEEEE
T ss_pred EEECCCCCEEEEEeC-CCeEEEEEecc-C--ceeeeec-------CC------ceEEeeecCCCCceeeccC--CCEEEE
Confidence 679999998887765 78888887642 2 2222221 11 3457899999999887764 689999
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
|++.. ..++......-. . ....+.. +.-..++++|||++|+++.
T Consensus 282 wd~~~---~~~~~~~~~~~~--------~------------~~~~~h~--~~v~~l~~s~dg~~l~sgs 325 (340)
T 4aow_A 282 WDLEG---KIIVDELKQEVI--------S------------TSSKAEP--PQCTSLAWSADGQTLFAGY 325 (340)
T ss_dssp EETTT---TEEEEEECCC---------------------------CCC--CCEEEEEECTTSSEEEEEE
T ss_pred EECCC---CeEEEeccccce--------e------------eeccCCC--CCEEEEEECCCCCEEEEEe
Confidence 98843 444333321000 0 0001111 1246789999999998887
No 150
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.72 E-value=0.0008 Score=60.18 Aligned_cols=96 Identities=11% Similarity=0.129 Sum_probs=65.3
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++|+|+|+++.+..+ +.+|.+|.. +|+. .+++. |.. .....+.+||||++|..+. ..+.|.+
T Consensus 22 ~a~spdg~~las~~~-d~~v~iWd~--~~~~--~~~l~-------gh~-----~~V~~l~fspdg~~las~~-~d~~i~v 83 (577)
T 2ymu_A 22 VAFSPDGQTIASASD-DKTVKLWNR--NGQL--LQTLT-------GHS-----SSVWGVAFSPDGQTIASAS-DDKTVKL 83 (577)
T ss_dssp EEECTTSSCEEEEET-TSEEEEECT--TSCE--EEEEE-------CCS-----SCEEEEEECTTSSEEEEEE-TTSCEEE
T ss_pred EEECCCCCEEEEEeC-CCEEEEEEC--CCCE--EEEEe-------CCC-----CCEEEEEECCCCCEEEEEe-CCCEEEE
Confidence 789999999888765 778888863 4432 23322 110 3468999999999997665 4678999
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
|+++ ++++..+.. . .+..+.++++|||++|..+.
T Consensus 84 Wd~~----~~~~~~~~~-----------------------------~--~~~v~~~~~s~d~~~l~~~~ 117 (577)
T 2ymu_A 84 WNRN----GQLLQTLTG-----------------------------H--SSSVRGVAFSPDGQTIASAS 117 (577)
T ss_dssp EETT----SCEEEEECC-----------------------------C--SSCEEEEEECTTSSEEEEEE
T ss_pred EECC----CCEEEEEEC-----------------------------C--CCCEEEEEECCCCCEEEEEc
Confidence 9863 333322211 0 11267899999999998775
No 151
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.70 E-value=0.0027 Score=55.14 Aligned_cols=108 Identities=9% Similarity=0.043 Sum_probs=71.2
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++++|+++..|++..-..+|+.+..+ |+ ..+.+.+. |. .-.-.|.+.++|+ +|+++.+.+.+.+
T Consensus 32 la~~~~~~~L~aV~d~~~~I~~ld~~--g~--v~~~i~l~-----g~------~D~EGIa~~~~g~-~~vs~E~~~~l~~ 95 (255)
T 3qqz_A 32 LTWSAQSNTLFSTINKPAAIVEMTTN--GD--LIRTIPLD-----FV------KDLETIEYIGDNQ-FVISDERDYAIYV 95 (255)
T ss_dssp EEEETTTTEEEEEEETTEEEEEEETT--CC--EEEEEECS-----SC------SSEEEEEECSTTE-EEEEETTTTEEEE
T ss_pred eEEeCCCCEEEEEECCCCeEEEEeCC--CC--EEEEEecC-----CC------CChHHeEEeCCCE-EEEEECCCCcEEE
Confidence 68999999999876668899998764 54 34554432 11 2246788999887 5577777789999
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
|+++.....+.+.++... +...| -+.+..-++++|++++||+++
T Consensus 96 ~~v~~~~~i~~~~~~~~~----------------~~~~~---------~N~g~EGLA~d~~~~~L~va~ 139 (255)
T 3qqz_A 96 ISLTPNSEVKILKKIKIP----------------LQESP---------TNCGFEGLAYSRQDHTFWFFK 139 (255)
T ss_dssp EEECTTCCEEEEEEEECC----------------CSSCC---------CSSCCEEEEEETTTTEEEEEE
T ss_pred EEcCCCCeeeeeeeeccc----------------ccccc---------ccCCcceEEEeCCCCEEEEEE
Confidence 999653322223333321 00011 122467899999999999999
No 152
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.70 E-value=0.00041 Score=66.71 Aligned_cols=102 Identities=12% Similarity=0.037 Sum_probs=70.8
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
=++|++.++.+|+..--...|.++..+ |.-. .++ +...+. ..+..|++++.++.||+++...+.|.
T Consensus 44 ~ld~~~~~~~ly~sD~~~~~I~r~~~~--g~~~-~~~--v~~~~~---------~~P~GlAvD~~~~~ly~~d~~~~~I~ 109 (619)
T 3s94_A 44 AVDFVFSHGLIYWSDVSEEAIKRTEFN--KTES-VQN--VVVSGL---------LSPDGLACDWLGEKLYWTDSETNRIE 109 (619)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEC--------CEE--EECSSC---------SCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEEeCCCEEEEEECCCCeEEEEEcc--CCCc-eEE--EEeCCC---------CCcCeEEEEecCCEEEEEeCCCCEEE
Confidence 468999999999998777889988764 3311 111 111111 34689999999999999999999999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+++.+. ...+. +-. + .... ||.++++|.+.+||+|+
T Consensus 110 v~~~dG-~~~~~---l~~-~-------------------------~l~~----P~~Iavdp~~g~ly~tD 145 (619)
T 3s94_A 110 VSNLDG-SLRKV---LFW-Q-------------------------ELDQ----PRAIALDPSSGFMYWTD 145 (619)
T ss_dssp EEETTS-CSCEE---EEC-S-------------------------SCSC----CCCEEEETTTTEEEEEE
T ss_pred EEECCC-CCEEE---EEe-C-------------------------CCCC----CceEEEecCCCeEEEec
Confidence 998742 11111 111 0 1233 99999999999999998
No 153
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.69 E-value=0.00037 Score=60.78 Aligned_cols=100 Identities=13% Similarity=-0.036 Sum_probs=64.4
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
-++|+|++...++..-.+.+|.+|... +++. .+.+. +. ......|.+||||+.+.+|.-.+++|+
T Consensus 219 ~~~~~p~~~~~l~sg~~dg~v~~wd~~-~~~~--~~~~~-------~h-----~~~v~~v~fsp~g~~~lasgs~D~~i~ 283 (344)
T 4gqb_B 219 SLAWHPQQSEVFVFGDENGTVSLVDTK-STSC--VLSSA-------VH-----SQCVTGLVFSPHSVPFLASLSEDCSLA 283 (344)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEESC-C--C--CEEEE-------CC-----SSCEEEEEECSSSSCCEEEEETTSCEE
T ss_pred eeeecCCCCcceEEeccCCcEEEEECC-CCcE--EEEEc-------CC-----CCCEEEEEEccCCCeEEEEEeCCCeEE
Confidence 478999877666666668889888763 2322 12211 11 034689999999965555555678999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++. .++++ ...|. .+.-+.+++||+|++|+++.
T Consensus 284 vwd~~---~~~~~---~~~~H-----------------------------~~~V~~v~~sp~~~~llas~ 318 (344)
T 4gqb_B 284 VLDSS---LSELF---RSQAH-----------------------------RDFVRDATWSPLNHSLLTTV 318 (344)
T ss_dssp EECTT---CCEEE---EECCC-----------------------------SSCEEEEEECSSSTTEEEEE
T ss_pred EEECC---CCcEE---EEcCC-----------------------------CCCEEEEEEeCCCCeEEEEE
Confidence 99874 34442 22111 11267899999999998877
No 154
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.69 E-value=0.0015 Score=55.46 Aligned_cols=101 Identities=9% Similarity=0.104 Sum_probs=67.2
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
-++|+|+++++++..+ +++|.+|..+ ++ ....+... . .....|.+||+++++.+++-..+.|.
T Consensus 168 ~~~~~~~~~~l~~~~~-d~~i~i~d~~--~~--~~~~~~~h----~--------~~v~~~~~~~~~~~~l~s~~~d~~i~ 230 (383)
T 3ei3_B 168 CVDVSVSRQMLATGDS-TGRLLLLGLD--GH--EIFKEKLH----K--------AKVTHAEFNPRCDWLMATSSVDATVK 230 (383)
T ss_dssp EEEEETTTTEEEEEET-TSEEEEEETT--SC--EEEEEECS----S--------SCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred EEEECCCCCEEEEECC-CCCEEEEECC--CC--EEEEeccC----C--------CcEEEEEECCCCCCEEEEEeCCCEEE
Confidence 4689999998887765 6888888763 32 12222211 1 44689999999995555555678999
Q ss_pred EEEecCCC-CCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECC-CCCEEEEEe
Q 027522 84 QYNIEDPK-NPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSL-DGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~-~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lsp-dGk~LyvaN 153 (222)
+|++.... ..+++..... .. ....++++| ||++|+++.
T Consensus 231 iwd~~~~~~~~~~~~~~~~----------------------------~~----~v~~~~~s~~~~~~l~~~~ 270 (383)
T 3ei3_B 231 LWDLRNIKDKNSYIAEMPH----------------------------EK----PVNAAYFNPTDSTKLLTTD 270 (383)
T ss_dssp EEEGGGCCSTTCEEEEEEC----------------------------SS----CEEEEEECTTTSCEEEEEE
T ss_pred EEeCCCCCcccceEEEecC----------------------------CC----ceEEEEEcCCCCCEEEEEc
Confidence 99996422 2334322211 11 267899999 999998887
No 155
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.68 E-value=0.00014 Score=63.15 Aligned_cols=106 Identities=17% Similarity=0.185 Sum_probs=57.9
Q ss_pred EEEcCCCCeEEEEecc-----CceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCC
Q 027522 5 FLHDPSKDIGFVGCAL-----ASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH 79 (222)
Q Consensus 5 ~afhP~g~~aYvv~EL-----sstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh 79 (222)
++|+|||+++....+. +.+|.+|.. .++... ..+....... .....+|..|||+++|-+|. .
T Consensus 48 v~fSpDG~~las~s~d~~~~wd~~v~~~~~-~~~~~~----~~~~~~~~~~------~~~V~~~~~s~d~~~l~~s~--d 114 (357)
T 4g56_B 48 VRYRRDGALLLAASSLSSRTWGGSIWVFKD-PEGAPN----ESLCTAGVQT------EAGVTDVAWVSEKGILVASD--S 114 (357)
T ss_dssp EEECSSSCEEEEEECSSSSSCCEEEEEESS-CC---C----GGGCSEEEEC------SSCEEEEEEETTTEEEEEET--T
T ss_pred EEECCCCCEEEEEcCCCCccccCeEEEEEC-CCCCcc----eeEecccCCC------CCCEEEEEEcCCCCEEEEEC--C
Confidence 5799999999888764 345655533 222110 0000000011 14468999999999886664 6
Q ss_pred CcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 80 GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 80 ~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
++|++|++.. ++...+.+.... |. .+.-+.++++|||++|+.+.
T Consensus 115 g~v~lWd~~~-~~~~~~~~~~~~---------------------------~h--~~~V~~v~~spdg~~l~sgs 158 (357)
T 4g56_B 115 GAVELWEILE-KESLLVNKFAKY---------------------------EH--DDIVKTLSVFSDGTQAVSGG 158 (357)
T ss_dssp SCEEEC---------CCCCEEEC---------------------------CC--SSCEEEEEECSSSSEEEEEE
T ss_pred CEEEEeeccc-cceeEEEeeccC---------------------------CC--CCCEEEEEECCCCCEEEEEe
Confidence 7899999954 222111111110 11 01257899999999998875
No 156
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.68 E-value=0.0025 Score=52.65 Aligned_cols=99 Identities=12% Similarity=0.067 Sum_probs=66.4
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|+|+++++....+ +.+|.+|... +++. .+.+. +. ......|.+|||+++|+++.. .+.|.
T Consensus 28 ~~~~s~~~~~l~s~~~-dg~i~iw~~~-~~~~--~~~~~-------~h-----~~~v~~~~~~~~~~~l~s~~~-d~~i~ 90 (312)
T 4ery_A 28 SVKFSPNGEWLASSSA-DKLIKIWGAY-DGKF--EKTIS-------GH-----KLGISDVAWSSDSNLLVSASD-DKTLK 90 (312)
T ss_dssp EEEECTTSSEEEEEET-TSCEEEEETT-TCCE--EEEEC-------CC-----SSCEEEEEECTTSSEEEEEET-TSEEE
T ss_pred EEEECCCCCEEEEeeC-CCeEEEEeCC-Cccc--chhhc-------cC-----CCceEEEEEcCCCCEEEEECC-CCEEE
Confidence 4689999998877664 7788888753 3433 22221 11 034689999999999987774 67899
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++.. ++.+..+... .. .-..++++|+|++|+.+.
T Consensus 91 vwd~~~---~~~~~~~~~~---------------------------~~----~v~~~~~~~~~~~l~s~~ 126 (312)
T 4ery_A 91 IWDVSS---GKCLKTLKGH---------------------------SN----YVFCCNFNPQSNLIVSGS 126 (312)
T ss_dssp EEETTT---CCEEEEEECC---------------------------SS----CEEEEEECSSSSEEEEEE
T ss_pred EEECCC---CcEEEEEcCC---------------------------CC----CEEEEEEcCCCCEEEEEe
Confidence 999853 3443333210 11 146789999999998875
No 157
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.67 E-value=0.00094 Score=61.94 Aligned_cols=30 Identities=10% Similarity=-0.012 Sum_probs=21.5
Q ss_pred CceeEEEEcCCCCEEE-EEeCCCC--cEEEEEe
Q 027522 58 GLITDFLISLDDRFLY-FSNWLHG--DIRQYNI 87 (222)
Q Consensus 58 ~~~adI~iSpDgrfLY-vSnRgh~--sI~vf~i 87 (222)
.....+.+||||++|+ .++|+.+ .|.+|++
T Consensus 255 ~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~ 287 (723)
T 1xfd_A 255 YYITMVKWATSTKVAVTWLNRAQNVSILTLCDA 287 (723)
T ss_dssp EEEEEEEESSSSEEEEEEEETTSCEEEEEEEET
T ss_pred ceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeC
Confidence 3457899999999994 5677654 4555555
No 158
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.67 E-value=0.00081 Score=61.03 Aligned_cols=135 Identities=16% Similarity=0.113 Sum_probs=76.6
Q ss_pred EEEcCCCCeEEEEecc-CceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCC---CCEEEEEe--CC
Q 027522 5 FLHDPSKDIGFVGCAL-ASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLD---DRFLYFSN--WL 78 (222)
Q Consensus 5 ~afhP~g~~aYvv~EL-sstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpD---grfLYvSn--Rg 78 (222)
++|.|+|+ +| +.|. ..+|.++.. .+|+.+ .+..++.-...+. ...-+|+++|| +++||++- ..
T Consensus 37 ia~~pdG~-ll-Vter~~G~I~~v~~-~~g~~~--~v~~~~~v~~~g~------~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 37 LAPLPGGD-LL-VSSRDEATITRVDA-KTGRKT--ELGEVPGVSPSGE------GGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp EEECTTSC-EE-EEETTTCEEEEECT-TTCCEE--EEEECTTCCCBTT------BSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred EEEcCCCc-EE-EEEecCCEEEEEEC-CCCcEe--eecccCceeecCC------CCceeeEeccccccCCEEEEEEecCC
Confidence 68999997 44 5566 889998853 235432 2223332222333 45689999997 89999963 34
Q ss_pred CCcEEEEEecCCC--CCeEE--EEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeC
Q 027522 79 HGDIRQYNIEDPK--NPVLT--GQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNS 154 (222)
Q Consensus 79 h~sI~vf~i~d~~--~~~L~--~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNs 154 (222)
.+.|..|..+... ..++. ..|.. + .|. .+.| .++.|+++||| +|||+..
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~-------------~------~p~----~~~H---~g~~l~fgpDG-~Lyvt~G 158 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFR-------------G------IPK----GVIH---NGGRIAFGPDK-MLYAGTG 158 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEE-------------E------ECC----CSSC---CCCCEEECTTS-CEEEECB
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEE-------------c------CCC----CCCc---cCccccCCCCC-CEEEEEC
Confidence 5678888775311 01221 11111 0 011 1222 37889999999 5999841
Q ss_pred -CCCccccccccccccCCcEEEEEEee
Q 027522 155 -LFSAWDCQFYPELKEKGSHMLQIDVN 180 (222)
Q Consensus 155 -l~~~wd~Q~yp~~~s~~~~i~~~dvd 180 (222)
--.....|+ ..+....|+|++.|
T Consensus 159 d~~~~~~~qd---~~~~~G~IlRi~~d 182 (347)
T 3das_A 159 ESGDTGLSQD---RKSLGGKILRMTPD 182 (347)
T ss_dssp CTTCGGGTTC---TTCSTTCEEEECTT
T ss_pred CCCCCccccC---CCCCCCEEEEEeCC
Confidence 111222232 12346889999765
No 159
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.67 E-value=0.0016 Score=56.42 Aligned_cols=99 Identities=8% Similarity=-0.014 Sum_probs=69.2
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeC--CCCc
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW--LHGD 81 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnR--gh~s 81 (222)
-++|+|+++++++.++ +++|.+|... +++. .... .. .. .....|.+||+++.|+++.- ..+.
T Consensus 222 ~~~~~~~~~~l~s~~~-d~~v~iwd~~-~~~~--~~~~--~~--~~--------~~v~~~~~~p~~~~ll~~~~gs~d~~ 285 (401)
T 4aez_A 222 GLAWRSDGLQLASGGN-DNVVQIWDAR-SSIP--KFTK--TN--HN--------AAVKAVAWCPWQSNLLATGGGTMDKQ 285 (401)
T ss_dssp EEEECTTSSEEEEEET-TSCEEEEETT-CSSE--EEEE--CC--CS--------SCCCEEEECTTSTTEEEEECCTTTCE
T ss_pred EEEEcCCCCEEEEEeC-CCeEEEccCC-CCCc--cEEe--cC--Cc--------ceEEEEEECCCCCCEEEEecCCCCCE
Confidence 3789999998888776 6788888764 2222 2211 11 01 34589999999999999875 4789
Q ss_pred EEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 82 IRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 82 I~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
|.+|++.. ++.+..+.. +.. .+.++++|+|++|+++.
T Consensus 286 i~i~d~~~---~~~~~~~~~----------------------------~~~----v~~~~~s~~~~~l~~~~ 322 (401)
T 4aez_A 286 IHFWNAAT---GARVNTVDA----------------------------GSQ----VTSLIWSPHSKEIMSTH 322 (401)
T ss_dssp EEEEETTT---CCEEEEEEC----------------------------SSC----EEEEEECSSSSEEEEEE
T ss_pred EEEEECCC---CCEEEEEeC----------------------------CCc----EEEEEECCCCCeEEEEe
Confidence 99999843 445444433 122 67899999999999975
No 160
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.67 E-value=0.00038 Score=63.95 Aligned_cols=125 Identities=13% Similarity=0.227 Sum_probs=82.5
Q ss_pred EeEEEcCCCC---eEEEEecc--CceEEEEEeC-CCCCeeEEEEEEecCcccccccCCCCCCceeEEEE--cCC-CC-EE
Q 027522 3 IRFLHDPSKD---IGFVGCAL--ASTMVRFSKT-QDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLI--SLD-DR-FL 72 (222)
Q Consensus 3 vr~afhP~g~---~aYvv~EL--sstV~~~~~d-~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~i--SpD-gr-fL 72 (222)
+|--|+-+|+ .+|+.|.- .++|.+|..+ +++.++....+.. |-. ++- ..+..|.+ ||+ ++ |+
T Consensus 75 ~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~-pv~-t~~------~~pyGlcly~~~~~g~~ya 146 (355)
T 3amr_A 75 IRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDH-PIA-TAI------NEVYGFTLYHSQKTGKYYA 146 (355)
T ss_dssp EEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTS-CEE-CCC------SSCCCEEEEECTTTCCEEE
T ss_pred EecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeecccccc-CcC-CCC------CCeeEEEEEecCCCCcEEE
Confidence 4555554454 68999987 8999999886 3454432211100 100 000 33577888 885 55 79
Q ss_pred EEEeCCCCcEEEEEecCCCCC----eEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCE
Q 027522 73 YFSNWLHGDIRQYNIEDPKNP----VLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKR 148 (222)
Q Consensus 73 YvSnRgh~sI~vf~i~d~~~~----~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~ 148 (222)
||++.. +.+.||++.+..++ +++.++.+++ . |..++.++...+
T Consensus 147 fV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~lgs----------------------------q----~EgcvvDd~~g~ 193 (355)
T 3amr_A 147 MVTGKE-GEFEQYELKADKNGYISGKKVRAFKMNS----------------------------Q----TEGMAADDEYGR 193 (355)
T ss_dssp EEECSS-SEEEEEEEEECTTSCEEEEEEEEEECSS----------------------------C----EEEEEEETTTTE
T ss_pred EEECCC-CeEEEEEEEeCCCCcccceEEEEecCCC----------------------------C----cceEEEcCCCCe
Confidence 999875 89999999765444 5555555532 2 889999999999
Q ss_pred EEEEeCCCCccccccccccccCCcEEEEEEeeCCCC
Q 027522 149 LYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKG 184 (222)
Q Consensus 149 LyvaNsl~~~wd~Q~yp~~~s~~~~i~~~dvd~~~G 184 (222)
|||+. | + ..|.++|.+++++
T Consensus 194 Lyv~e--------E-------d-~GIw~~da~p~~~ 213 (355)
T 3amr_A 194 LYIAE--------E-------D-EAIWKFSAEPDGG 213 (355)
T ss_dssp EEEEE--------T-------T-TEEEEEECSTTSC
T ss_pred EEEec--------c-------c-ceEEEEeCCcCCC
Confidence 99998 4 3 4488898877764
No 161
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.67 E-value=8.4e-05 Score=64.29 Aligned_cols=74 Identities=9% Similarity=0.042 Sum_probs=51.8
Q ss_pred EeEEEcCCCCeEEEEe--ccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCC
Q 027522 3 IRFLHDPSKDIGFVGC--ALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHG 80 (222)
Q Consensus 3 vr~afhP~g~~aYvv~--ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~ 80 (222)
.+++|+|+++++++.. .-+.+|.+|.... +... .....+. .. .....+.+|||+++||+++...+
T Consensus 224 ~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~-~~~~-~~~~~~~-----~~------~~v~~~~~s~~~~~l~~~g~~dg 290 (402)
T 2aq5_A 224 VHAVFVSEGKILTTGFSRMSERQVALWDTKH-LEEP-LSLQELD-----TS------SGVLLPFFDPDTNIVYLCGKGDS 290 (402)
T ss_dssp CEEEECSTTEEEEEEECTTCCEEEEEEETTB-CSSC-SEEEECC-----CC------SSCEEEEEETTTTEEEEEETTCS
T ss_pred eEEEEcCCCcEEEEeccCCCCceEEEEcCcc-ccCC-ceEEecc-----CC------CceeEEEEcCCCCEEEEEEcCCC
Confidence 4688999999887774 3567888887642 2210 1111111 11 33578999999999999998899
Q ss_pred cEEEEEecC
Q 027522 81 DIRQYNIED 89 (222)
Q Consensus 81 sI~vf~i~d 89 (222)
.|.+|++..
T Consensus 291 ~i~i~d~~~ 299 (402)
T 2aq5_A 291 SIRYFEITS 299 (402)
T ss_dssp CEEEEEECS
T ss_pred eEEEEEecC
Confidence 999999954
No 162
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.65 E-value=0.0019 Score=56.25 Aligned_cols=110 Identities=19% Similarity=0.195 Sum_probs=64.3
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEec------CcccccccCCCCCCceeEEEEcCCCCEEEEEeC
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVK------SLKVQNWILPEMPGLITDFLISLDDRFLYFSNW 77 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~------p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnR 77 (222)
.++|+|+|+++.+.+ +.+|.+|... +|+... .+.-. +........+........+.+||||++|..+.
T Consensus 69 ~v~fspdg~~la~g~--~~~v~i~~~~-~g~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~- 142 (393)
T 1erj_A 69 CVKFSNDGEYLATGC--NKTTQVYRVS-DGSLVA--RLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGA- 142 (393)
T ss_dssp EEEECTTSSEEEEEC--BSCEEEEETT-TCCEEE--EECC-----------------CCCCBEEEEEECTTSSEEEEEE-
T ss_pred EEEECCCCCEEEEEc--CCcEEEEEec-CCCEEE--EecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEc-
Confidence 367999999887765 5677777653 444321 11110 00000000000112367999999999998766
Q ss_pred CCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 78 LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 78 gh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
..+.|.+|++.. ++++..+. |.. +....++++|+|++|+.+.
T Consensus 143 ~d~~i~iwd~~~---~~~~~~~~-----------------------------~h~--~~v~~~~~~p~~~~l~s~s 184 (393)
T 1erj_A 143 EDRLIRIWDIEN---RKIVMILQ-----------------------------GHE--QDIYSLDYFPSGDKLVSGS 184 (393)
T ss_dssp TTSCEEEEETTT---TEEEEEEC-----------------------------CCS--SCEEEEEECTTSSEEEEEE
T ss_pred CCCeEEEEECCC---CcEEEEEc-----------------------------cCC--CCEEEEEEcCCCCEEEEec
Confidence 478999999843 44432221 110 1156899999999998775
No 163
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.64 E-value=0.0005 Score=61.37 Aligned_cols=103 Identities=18% Similarity=0.223 Sum_probs=68.1
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCC--CeeEEEEEEecCcccccccCCCCCCc-eeEEEEcC--CCCEEEEEeCC
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDG--SWNHEVAISVKSLKVQNWILPEMPGL-ITDFLISL--DDRFLYFSNWL 78 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g--~~~~~q~is~~p~~~~g~~~~~~~~~-~adI~iSp--DgrfLYvSnRg 78 (222)
.++|+|+|+++.+.+ +.+|.+|..+ ++ ..+..+.+ . +. ... ...+.+|| |+++|+++..
T Consensus 23 ~~~~spdg~~l~~~~--~~~v~v~~~~-~~~~~~~~~~~~--~-----~h-----~~~~v~~~~~sp~~~~~~l~s~~~- 86 (615)
T 1pgu_A 23 HLSYDPTTNAIAYPC--GKSAFVRCLD-DGDSKVPPVVQF--T-----GH-----GSSVVTTVKFSPIKGSQYLCSGDE- 86 (615)
T ss_dssp CCEEETTTTEEEEEE--TTEEEEEECC-SSCCSSCSEEEE--C-----TT-----TTSCEEEEEECSSTTCCEEEEEET-
T ss_pred EEEECCCCCEEEEec--CCeEEEEECC-CCCCccccceEE--e-----cC-----CCceEEEEEECcCCCCCEEEEecC-
Confidence 478999999988887 6788888764 33 11112221 1 11 134 68999999 9999988775
Q ss_pred CCcEEEEEecCCC-----CCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 79 HGDIRQYNIEDPK-----NPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 79 h~sI~vf~i~d~~-----~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
.+.|.+|++.... ..++...+.. ..+..+.++++|||++|+++.
T Consensus 87 dg~v~vw~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~v~~~~~s~~~~~l~~~~ 135 (615)
T 1pgu_A 87 SGKVIVWGWTFDKESNSVEVNVKSEFQV-------------------------------LAGPISDISWDFEGRRLCVVG 135 (615)
T ss_dssp TSEEEEEEEEEEGGGTEEEEEEEEEEEC-------------------------------CSSCEEEEEECTTSSEEEEEE
T ss_pred CCEEEEEeCCCCcccccccccccchhhc-------------------------------ccccEEEEEEeCCCCEEEEec
Confidence 7899999995310 1223222221 011268999999999999886
No 164
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.63 E-value=0.00071 Score=58.94 Aligned_cols=69 Identities=9% Similarity=-0.039 Sum_probs=50.3
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++|+|+|+++....+ +.+|.+|... +++ ..++ .. +. ......+.+|||++.+++|+-.++.|++
T Consensus 133 v~~spdg~~l~sgs~-d~~i~iwd~~-~~~--~~~~---~~----~h-----~~~V~~~~~~~~~~~~l~s~s~D~~v~i 196 (344)
T 4gqb_B 133 VSVLSSGTQAVSGSK-DICIKVWDLA-QQV--VLSS---YR----AH-----AAQVTCVAASPHKDSVFLSCSEDNRILL 196 (344)
T ss_dssp EEECTTSSEEEEEET-TSCEEEEETT-TTE--EEEE---EC----CC-----SSCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred EEECCCCCEEEEEeC-CCeEEEEECC-CCc--EEEE---Ec----Cc-----CCceEEEEecCCCCCceeeecccccccc
Confidence 679999999888776 7788888764 332 2222 21 11 0446889999999988888878899999
Q ss_pred EEecC
Q 027522 85 YNIED 89 (222)
Q Consensus 85 f~i~d 89 (222)
|++..
T Consensus 197 wd~~~ 201 (344)
T 4gqb_B 197 WDTRC 201 (344)
T ss_dssp EETTS
T ss_pred ccccc
Confidence 99853
No 165
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.62 E-value=0.0065 Score=50.28 Aligned_cols=102 Identities=12% Similarity=0.026 Sum_probs=67.3
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCC--CCEEEEEeCCCCcE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLD--DRFLYFSNWLHGDI 82 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpD--grfLYvSnRgh~sI 82 (222)
++|+|+++++.+.++ +.+|.+|..+. +.....+.+. .. . .....|.+|++ +++|+++.. .+.|
T Consensus 17 ~~~s~~~~~l~~~~~-dg~i~iw~~~~-~~~~~~~~~~---~h-~--------~~v~~~~~~~~~~~~~l~s~~~-dg~v 81 (379)
T 3jrp_A 17 AVLDYYGKRLATCSS-DKTIKIFEVEG-ETHKLIDTLT---GH-E--------GPVWRVDWAHPKFGTILASCSY-DGKV 81 (379)
T ss_dssp EEECSSSSEEEEEET-TSCEEEEEEET-TEEEEEEEEC---CC-S--------SCEEEEEECCGGGCSEEEEEET-TSCE
T ss_pred EEEcCCCCEEEEEEC-CCcEEEEecCC-CcceeeeEec---CC-C--------CcEEEEEeCCCCCCCEEEEecc-CCEE
Confidence 689999999887776 78888887742 2333333221 11 1 34689999988 999988875 6789
Q ss_pred EEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCC--CCEEEEEe
Q 027522 83 RQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLD--GKRLYVTN 153 (222)
Q Consensus 83 ~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspd--Gk~LyvaN 153 (222)
.+|++.. .....+..... ... ..+.++++|+ |++|+++.
T Consensus 82 ~iwd~~~-~~~~~~~~~~~---------------------------~~~----~v~~~~~~~~~~~~~l~~~~ 122 (379)
T 3jrp_A 82 LIWKEEN-GRWSQIAVHAV---------------------------HSA----SVNSVQWAPHEYGPLLLVAS 122 (379)
T ss_dssp EEEEEET-TEEEEEEEECC---------------------------CSS----CEEEEEECCGGGCSEEEEEE
T ss_pred EEEEcCC-CceeEeeeecC---------------------------CCc----ceEEEEeCCCCCCCEEEEec
Confidence 9999964 21112111110 011 2678999999 99998886
No 166
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.62 E-value=0.0029 Score=53.39 Aligned_cols=87 Identities=8% Similarity=0.118 Sum_probs=54.4
Q ss_pred eEEEcCCCCeEEEEeccC--ceEEEEEeCCCCCeeEEEEEEecCccc----ccccCCCCCCceeEEEEcCCCCEEEEEeC
Q 027522 4 RFLHDPSKDIGFVGCALA--STMVRFSKTQDGSWNHEVAISVKSLKV----QNWILPEMPGLITDFLISLDDRFLYFSNW 77 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELs--stV~~~~~d~~g~~~~~q~is~~p~~~----~g~~~~~~~~~~adI~iSpDgrfLYvSnR 77 (222)
.++|+|+++++++.++-+ .+|.+|... ++ +....+..++.+. .... -......|.+|||+++|+++.
T Consensus 238 ~i~~~~~~~~l~~~~~d~~~g~i~i~d~~-~~--~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~- 310 (397)
T 1sq9_A 238 SVKFSPQGSLLAIAHDSNSFGCITLYETE-FG--ERIGSLSVPTHSSQASLGEFA---HSSWVMSLSFNDSGETLCSAG- 310 (397)
T ss_dssp EEEECSSTTEEEEEEEETTEEEEEEEETT-TC--CEEEEECBC--------CCBS---BSSCEEEEEECSSSSEEEEEE-
T ss_pred eEEECCCCCEEEEEecCCCCceEEEEECC-CC--cccceeccCcccccccccccc---cCCcEEEEEECCCCCEEEEEe-
Confidence 478999999988887622 678888764 33 2233332211000 0000 014568999999999998877
Q ss_pred CCCcEEEEEecCCCCCeEEEEEE
Q 027522 78 LHGDIRQYNIEDPKNPVLTGQIW 100 (222)
Q Consensus 78 gh~sI~vf~i~d~~~~~L~~~v~ 100 (222)
..+.|.+|++.. ++++..+.
T Consensus 311 ~dg~i~iwd~~~---~~~~~~~~ 330 (397)
T 1sq9_A 311 WDGKLRFWDVKT---KERITTLN 330 (397)
T ss_dssp TTSEEEEEETTT---TEEEEEEE
T ss_pred CCCeEEEEEcCC---CceeEEEe
Confidence 477899999843 55655554
No 167
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.61 E-value=0.00099 Score=56.00 Aligned_cols=68 Identities=13% Similarity=0.080 Sum_probs=46.9
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|+|++ +++ .+-.+.+|.+|... ++ +....+... . .....|.+||||++|++++. .+.|.
T Consensus 294 ~~~~~~~~-~l~-~~~~d~~i~i~d~~-~~--~~~~~~~~~----~--------~~i~~~~~s~~~~~l~~~~~-dg~i~ 355 (425)
T 1r5m_A 294 SASWVGDD-KVI-SCSMDGSVRLWSLK-QN--TLLALSIVD----G--------VPIFAGRISQDGQKYAVAFM-DGQVN 355 (425)
T ss_dssp EEEEETTT-EEE-EEETTSEEEEEETT-TT--EEEEEEECT----T--------CCEEEEEECTTSSEEEEEET-TSCEE
T ss_pred EEEECCCC-EEE-EEeCCCcEEEEECC-CC--cEeEecccC----C--------ccEEEEEEcCCCCEEEEEEC-CCeEE
Confidence 57899999 444 44457889888764 33 223332221 1 34689999999999988874 67999
Q ss_pred EEEecC
Q 027522 84 QYNIED 89 (222)
Q Consensus 84 vf~i~d 89 (222)
+|++..
T Consensus 356 i~~~~~ 361 (425)
T 1r5m_A 356 VYDLKK 361 (425)
T ss_dssp EEECHH
T ss_pred EEECCC
Confidence 999964
No 168
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.60 E-value=0.0028 Score=52.36 Aligned_cols=99 Identities=10% Similarity=0.177 Sum_probs=65.2
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++|+|++++++..++ +.+|.+|... +++. .+.+.. . . .....+.+|||+++|+++.. .+.|.+
T Consensus 113 ~~~~~~~~~l~s~~~-d~~i~iwd~~-~~~~--~~~~~~---~-~--------~~v~~~~~~~~~~~l~~~~~-d~~i~~ 175 (312)
T 4ery_A 113 CNFNPQSNLIVSGSF-DESVRIWDVK-TGKC--LKTLPA---H-S--------DPVSAVHFNRDGSLIVSSSY-DGLCRI 175 (312)
T ss_dssp EEECSSSSEEEEEET-TSCEEEEETT-TCCE--EEEECC---C-S--------SCEEEEEECTTSSEEEEEET-TSCEEE
T ss_pred EEEcCCCCEEEEEeC-CCcEEEEECC-CCEE--EEEecC---C-C--------CcEEEEEEcCCCCEEEEEeC-CCcEEE
Confidence 579999998887765 7788888763 3322 222211 1 1 34688999999999987764 678999
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
|++.. ++.+..+... .... -..++++|+|++|+++.
T Consensus 176 wd~~~---~~~~~~~~~~--------------------------~~~~----~~~~~~~~~~~~l~~~~ 211 (312)
T 4ery_A 176 WDTAS---GQCLKTLIDD--------------------------DNPP----VSFVKFSPNGKYILAAT 211 (312)
T ss_dssp EETTT---CCEEEEECCS--------------------------SCCC----EEEEEECTTSSEEEEEE
T ss_pred EECCC---CceeeEEecc--------------------------CCCc----eEEEEECCCCCEEEEEc
Confidence 99843 3332222110 0111 45789999999999886
No 169
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.59 E-value=0.003 Score=54.98 Aligned_cols=98 Identities=11% Similarity=0.071 Sum_probs=66.3
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
-++|+|+|++++...+ +.+|.+|... +++. ..+ . .+. ......+.+||||++|+.+. ..+.|.
T Consensus 128 ~v~~s~dg~~l~s~~~-d~~i~iwd~~-~~~~--~~~---~----~~h-----~~~v~~~~~~p~~~~l~s~s-~d~~v~ 190 (393)
T 1erj_A 128 SVCFSPDGKFLATGAE-DRLIRIWDIE-NRKI--VMI---L----QGH-----EQDIYSLDYFPSGDKLVSGS-GDRTVR 190 (393)
T ss_dssp EEEECTTSSEEEEEET-TSCEEEEETT-TTEE--EEE---E----CCC-----SSCEEEEEECTTSSEEEEEE-TTSEEE
T ss_pred EEEECCCCCEEEEEcC-CCeEEEEECC-CCcE--EEE---E----ccC-----CCCEEEEEEcCCCCEEEEec-CCCcEE
Confidence 3789999999888776 7889998764 3321 222 1 111 03468999999999997665 578999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECC-CCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSL-DGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lsp-dGk~LyvaN 153 (222)
+|++.. ++....+.. .++.+.++++| ||++|+++.
T Consensus 191 iwd~~~---~~~~~~~~~--------------------------------~~~v~~~~~~~~~~~~l~~~s 226 (393)
T 1erj_A 191 IWDLRT---GQCSLTLSI--------------------------------EDGVTTVAVSPGDGKYIAAGS 226 (393)
T ss_dssp EEETTT---TEEEEEEEC--------------------------------SSCEEEEEECSTTCCEEEEEE
T ss_pred EEECCC---CeeEEEEEc--------------------------------CCCcEEEEEECCCCCEEEEEc
Confidence 999843 444322221 11267889999 898888775
No 170
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.58 E-value=0.0003 Score=59.40 Aligned_cols=72 Identities=13% Similarity=0.047 Sum_probs=48.5
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|+|+++++++.++ +.+|.+|..+....+...+.+..+ .. .....|.+|||+++|.++.. .+.|.
T Consensus 105 ~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~---h~--------~~v~~~~~~~~~~~l~~~~~-d~~i~ 171 (377)
T 3dwl_C 105 FVRWSPNEDKFAVGSG-ARVISVCYFEQENDWWVSKHLKRP---LR--------STILSLDWHPNNVLLAAGCA-DRKAY 171 (377)
T ss_dssp EEECCTTSSCCEEEES-SSCEEECCC-----CCCCEEECSS---CC--------SCEEEEEECTTSSEEEEEES-SSCEE
T ss_pred EEEECCCCCEEEEEec-CCeEEEEEECCcccceeeeEeecc---cC--------CCeEEEEEcCCCCEEEEEeC-CCEEE
Confidence 4689999998888877 778888766432223223332210 11 45689999999999987765 57899
Q ss_pred EEEec
Q 027522 84 QYNIE 88 (222)
Q Consensus 84 vf~i~ 88 (222)
+|++.
T Consensus 172 iwd~~ 176 (377)
T 3dwl_C 172 VLSAY 176 (377)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 99995
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.57 E-value=0.00035 Score=59.26 Aligned_cols=71 Identities=17% Similarity=0.057 Sum_probs=40.7
Q ss_pred eEEEcC-CCCeEEEEecc-----CceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEE-EEEe
Q 027522 4 RFLHDP-SKDIGFVGCAL-----ASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFL-YFSN 76 (222)
Q Consensus 4 r~afhP-~g~~aYvv~EL-----sstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfL-YvSn 76 (222)
.++|+| +|+.+..+.+- ...|+++..+ .+.. + .+.... .+ .....+.+||||+.| |+++
T Consensus 192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~-~~~~---~--~l~~~~-~~-------~~~~~~~~spdg~~l~~~~~ 257 (388)
T 3pe7_A 192 HPIYRPYDDSTVAFCHEGPHDLVDARMWLINED-GTNM---R--KVKTHA-EG-------ESCTHEFWVPDGSALVYVSY 257 (388)
T ss_dssp EEEEETTEEEEEEEEECSCTTTSSCSEEEEETT-SCCC---E--ESCCCC-TT-------EEEEEEEECTTSSCEEEEEE
T ss_pred ccEECCCCCCEEEEEEecCCCCCcceEEEEeCC-CCce---E--EeeeCC-CC-------cccccceECCCCCEEEEEec
Confidence 467999 88866555543 3367777643 2221 1 111110 00 124577899999976 7787
Q ss_pred CCCC-c--EEEEEec
Q 027522 77 WLHG-D--IRQYNIE 88 (222)
Q Consensus 77 Rgh~-s--I~vf~i~ 88 (222)
+... . |.+|++.
T Consensus 258 ~~~~~~~~l~~~d~~ 272 (388)
T 3pe7_A 258 LKGSPDRFIYSADPE 272 (388)
T ss_dssp ETTCCCEEEEEECTT
T ss_pred CCCCCcceEEEEecC
Confidence 7443 3 7777663
No 172
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.57 E-value=0.0032 Score=58.47 Aligned_cols=30 Identities=23% Similarity=0.485 Sum_probs=21.2
Q ss_pred CceeEEEEcCCCCEEEEE--eCCCC--cEEEEEe
Q 027522 58 GLITDFLISLDDRFLYFS--NWLHG--DIRQYNI 87 (222)
Q Consensus 58 ~~~adI~iSpDgrfLYvS--nRgh~--sI~vf~i 87 (222)
.....+.+||||++|+++ ++..+ .|.+|++
T Consensus 258 ~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~ 291 (706)
T 2z3z_A 258 KFLTNLSWSPDENILYVAEVNRAQNECKVNAYDA 291 (706)
T ss_dssp CEEEEEEECTTSSEEEEEEECTTSCEEEEEEEET
T ss_pred eeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEEC
Confidence 346899999999999984 44443 5555555
No 173
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.57 E-value=0.0035 Score=53.27 Aligned_cols=101 Identities=9% Similarity=0.076 Sum_probs=65.6
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
-++|+|++++++...+ +.+|.+|... ++.. .+.+. +. ......|.+||||++|.++. ..+.|+
T Consensus 189 ~~~~~~~~~~l~sg~~-d~~v~~wd~~-~~~~--~~~~~-------~h-----~~~v~~v~~~p~~~~l~s~s-~d~~v~ 251 (340)
T 1got_B 189 SLSLAPDTRLFVSGAC-DASAKLWDVR-EGMC--RQTFT-------GH-----ESDINAICFFPNGNAFATGS-DDATCR 251 (340)
T ss_dssp EEEECTTSSEEEEEET-TSCEEEEETT-TCSE--EEEEC-------CC-----SSCEEEEEECTTSSEEEEEE-TTSCEE
T ss_pred EEEECCCCCEEEEEeC-CCcEEEEECC-CCee--EEEEc-------CC-----cCCEEEEEEcCCCCEEEEEc-CCCcEE
Confidence 4689999987776665 7888888763 3322 22221 11 13468999999999987766 477999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++.. .+.+..... .....+...++++|+|++|+++.
T Consensus 252 iwd~~~---~~~~~~~~~-----------------------------~~~~~~v~~~~~s~~g~~l~~g~ 289 (340)
T 1got_B 252 LFDLRA---DQELMTYSH-----------------------------DNIICGITSVSFSKSGRLLLAGY 289 (340)
T ss_dssp EEETTT---TEEEEEECC-----------------------------TTCCSCEEEEEECTTSSEEEEEE
T ss_pred EEECCC---CcEEEEEcc-----------------------------CCcccceEEEEECCCCCEEEEEC
Confidence 999843 333221111 00011256799999999998887
No 174
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.56 E-value=0.0031 Score=52.66 Aligned_cols=56 Identities=16% Similarity=-0.040 Sum_probs=34.2
Q ss_pred eEEEcCCCCeEEEEeccC----ceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEe
Q 027522 4 RFLHDPSKDIGFVGCALA----STMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSN 76 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELs----stV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSn 76 (222)
.++|+|+|++++.+..-. ..|+++..+ .|+ ..+..... . ...+..||||+.|+++.
T Consensus 63 ~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~-~g~--~~~l~~~~-------------~-~~~~~wspdg~~l~~~~ 122 (347)
T 2gop_A 63 MPRISPDGKKIAFMRANEEKKVSEIWVADLE-TLS--SKKILEAK-------------N-IRSLEWNEDSRKLLIVG 122 (347)
T ss_dssp EEEECTTSSEEEEEEEETTTTEEEEEEEETT-TTE--EEEEEEES-------------E-EEEEEECTTSSEEEEEE
T ss_pred CeEECCCCCEEEEEEeccCCCcceEEEEECC-CCc--eEEEEcCC-------------C-ccceeECCCCCEEEEEE
Confidence 368999998766655432 346666543 332 22222211 2 47889999999887765
No 175
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.55 E-value=0.00028 Score=69.96 Aligned_cols=44 Identities=11% Similarity=0.061 Sum_probs=30.6
Q ss_pred CeeEEECCCCCEEEEEeCCCCccccccccccccCCcEEEEEEeeCCC---CCeee-ccceeEecC
Q 027522 137 PQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEK---GGMAI-NPNFFVDFE 197 (222)
Q Consensus 137 Pr~~~lspdGk~LyvaNsl~~~wd~Q~yp~~~s~~~~i~~~dvd~~~---G~l~~-~~~f~vdf~ 197 (222)
++.+++||||++|++++ + + .|..+|+++.+ +.+.+ +-++.+|..
T Consensus 610 v~~~~~S~DG~~l~~~~--------~-------~--~i~~~d~~~~~~~~~~~~~~~~~~~i~~~ 657 (1045)
T 1k32_A 610 LTDLRLSADRKTVMVRK--------D-------D--GKIYTFPLEKPEDERTVETDKRPLVSSIH 657 (1045)
T ss_dssp EEEEEECTTSCEEEEEE--------T-------T--SCEEEEESSCTTSCEECCCCSSCEEEEHH
T ss_pred cceEEECCCCCEEEEEc--------C-------C--cEEEEeCccCcccCCccccceeEEEEChh
Confidence 56789999999999998 3 3 46667665433 33566 567777653
No 176
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.55 E-value=0.0046 Score=51.18 Aligned_cols=107 Identities=11% Similarity=0.082 Sum_probs=66.2
Q ss_pred eEEEcC-------------CCCeEEEEeccCceEEEEEeCC-CCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCC-
Q 027522 4 RFLHDP-------------SKDIGFVGCALASTMVRFSKTQ-DGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLD- 68 (222)
Q Consensus 4 r~afhP-------------~g~~aYvv~ELsstV~~~~~d~-~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpD- 68 (222)
.++|+| +++++++.++ +.+|.+|.... ...+.....+... . .....|.+|||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~h----~--------~~v~~~~~sp~~ 218 (379)
T 3jrp_A 152 SASWAPATIEEDGEHNGTKESRKFVTGGA-DNLVKIWKYNSDAQTYVLESTLEGH----S--------DWVRDVAWSPTV 218 (379)
T ss_dssp EEEECCCC----------CTTCEEEEEET-TSCEEEEEEETTTTEEEEEEEECCC----S--------SCEEEEEECCCC
T ss_pred EEEEcCccccccccccCCCCCCEEEEEeC-CCeEEEEEecCCCcceeeEEEEecc----c--------CcEeEEEECCCC
Confidence 467888 6888777765 77888887642 2223222222110 1 34689999999
Q ss_pred --CCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCC
Q 027522 69 --DRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDG 146 (222)
Q Consensus 69 --grfLYvSnRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdG 146 (222)
+++|+++. ..+.|.+|++........ ..+.. .....+....++++|||
T Consensus 219 ~~~~~l~s~~-~dg~i~iwd~~~~~~~~~-~~~~~----------------------------~~~~~~~v~~~~~s~~g 268 (379)
T 3jrp_A 219 LLRSYLASVS-QDRTCIIWTQDNEQGPWK-KTLLK----------------------------EEKFPDVLWRASWSLSG 268 (379)
T ss_dssp SSSEEEEEEE-TTSCEEEEEESSTTSCCE-EEESS----------------------------SSCCSSCEEEEEECSSS
T ss_pred CCCCeEEEEe-CCCEEEEEeCCCCCccce-eeeec----------------------------cccCCCcEEEEEEcCCC
Confidence 78877665 578899999964322211 11111 00111225788999999
Q ss_pred CEEEEEe
Q 027522 147 KRLYVTN 153 (222)
Q Consensus 147 k~LyvaN 153 (222)
++|+++.
T Consensus 269 ~~l~~~~ 275 (379)
T 3jrp_A 269 NVLALSG 275 (379)
T ss_dssp CCEEEEE
T ss_pred CEEEEec
Confidence 9999887
No 177
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.55 E-value=0.001 Score=61.71 Aligned_cols=110 Identities=9% Similarity=-0.053 Sum_probs=61.3
Q ss_pred eEEEcCCCCeEEEE-eccCc----eEEEEEeC--CCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEe
Q 027522 4 RFLHDPSKDIGFVG-CALAS----TMVRFSKT--QDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSN 76 (222)
Q Consensus 4 r~afhP~g~~aYvv-~ELss----tV~~~~~d--~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSn 76 (222)
.++|+|+|++++++ ++-+. +..++.++ ..+.-...+ .+.+. .+ .....+.+||||++||++.
T Consensus 310 ~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~--~l~~~---~~------~~~~~~~~spdg~~l~~~~ 378 (723)
T 1xfd_A 310 EPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQ--SITSG---DW------DVTKILAYDEKGNKIYFLS 378 (723)
T ss_dssp CCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCC--BSCCS---SS------CEEEEEEEETTTTEEEEEE
T ss_pred CceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCcccee--EeecC---Ce------EEEeeeEEcCCCCEEEEEE
Confidence 46899999987776 77666 44444444 223200001 11111 11 1123368999999998665
Q ss_pred CCC--CcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 77 WLH--GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 77 Rgh--~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
... +.+.+|+++..+..+. ..+.+ +..-.++.+.+++||||++|+++.
T Consensus 379 ~~~~~~~~~l~~~~~~~~~~~---~~l~~--------------------------~~~~~~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 379 TEDLPRRRQLYSANTVGNFNR---QCLSC--------------------------DLVENCTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp SSSCTTCCEEEEECSSTTCCC---BCSST--------------------------TSSSSCCCCEEEECTTSSEEEEEC
T ss_pred cCCCCcceEEEEEeCCCCCCc---ceecc--------------------------cccCCCCeEEEEECCCCCEEEEEc
Confidence 444 7889999953221111 00100 000011267899999999999886
No 178
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.53 E-value=0.00052 Score=61.42 Aligned_cols=96 Identities=10% Similarity=0.108 Sum_probs=64.6
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++|+|+++++.+.++ +.+|.+|.. +|+. .+.+. +. ......|.+||||++|..+. .++.|++
T Consensus 473 ~~~spd~~~las~~~-d~~i~iw~~--~~~~--~~~~~-------~h-----~~~v~~l~~s~dg~~l~s~~-~dg~v~l 534 (577)
T 2ymu_A 473 VAFSPDGQTIASASD-DKTVKLWNR--NGQL--LQTLT-------GH-----SSSVRGVAFSPDGQTIASAS-DDKTVKL 534 (577)
T ss_dssp EEECTTSCEEEEEET-TSEEEEEET--TSCE--EEEEE-------CC-----SSCEEEEEECTTSSCEEEEE-TTSEEEE
T ss_pred EEEcCCCCEEEEEeC-CCEEEEEcC--CCCE--EEEEe-------CC-----CCCEEEEEEcCCCCEEEEEE-CcCEEEE
Confidence 689999998887776 778888864 3432 22222 11 03468999999999998766 4678999
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
|+.+ ++++..... . . +....+++||||++|+.+.
T Consensus 535 wd~~----~~~~~~~~~--h-------------------------~----~~v~~~~fs~dg~~l~s~~ 568 (577)
T 2ymu_A 535 WNRN----GQLLQTLTG--H-------------------------S----SSVWGVAFSPDGQTIASAS 568 (577)
T ss_dssp ECTT----SCEEEEEEC--C-------------------------S----SCEEEEEECTTSSCEEEEE
T ss_pred EeCC----CCEEEEEcC--C-------------------------C----CCEEEEEEcCCCCEEEEEe
Confidence 9752 334333221 0 1 1256899999999998775
No 179
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.53 E-value=0.0032 Score=58.78 Aligned_cols=100 Identities=12% Similarity=0.050 Sum_probs=67.9
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
-++|+|+++++.+..+ +++|.+|... +|+. .+.+... . .....+.+||||++|+++. ..+.|.
T Consensus 60 ~~~~s~~~~~l~~~~~-dg~i~vw~~~-~~~~--~~~~~~~----~--------~~v~~~~~s~~~~~l~~~~-~dg~i~ 122 (814)
T 3mkq_A 60 AGKFIARKNWIIVGSD-DFRIRVFNYN-TGEK--VVDFEAH----P--------DYIRSIAVHPTKPYVLSGS-DDLTVK 122 (814)
T ss_dssp EEEEEGGGTEEEEEET-TSEEEEEETT-TCCE--EEEEECC----S--------SCEEEEEECSSSSEEEEEE-TTSEEE
T ss_pred EEEEeCCCCEEEEEeC-CCeEEEEECC-CCcE--EEEEecC----C--------CCEEEEEEeCCCCEEEEEc-CCCEEE
Confidence 3689999999999988 8899999874 3432 2222211 1 4468999999999998776 467899
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECC-CCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSL-DGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lsp-dGk~LyvaN 153 (222)
+|++... ..+...+.. ... ....++++| +|+.|+++.
T Consensus 123 vw~~~~~--~~~~~~~~~---------------------------~~~----~v~~~~~~p~~~~~l~~~~ 160 (814)
T 3mkq_A 123 LWNWENN--WALEQTFEG---------------------------HEH----FVMCVAFNPKDPSTFASGC 160 (814)
T ss_dssp EEEGGGT--SEEEEEEEC---------------------------CSS----CEEEEEEETTEEEEEEEEE
T ss_pred EEECCCC--ceEEEEEcC---------------------------CCC----cEEEEEEEcCCCCEEEEEe
Confidence 9999541 233222221 011 157889999 888887776
No 180
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.51 E-value=0.006 Score=51.76 Aligned_cols=105 Identities=10% Similarity=0.062 Sum_probs=64.4
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCC--C--CeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCC
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQD--G--SWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH 79 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~--g--~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh 79 (222)
.++|+|+++++.+..+ +.+|.+|..... . .....++ . .+. ......+.+||||++|..+.. .
T Consensus 63 ~v~~sp~~~~las~s~-D~~v~iw~~~~~~~~~~~~~~~~~---~----~~h-----~~~V~~v~~sp~g~~las~s~-D 128 (330)
T 2hes_X 63 SVAWRPHTSLLAAGSF-DSTVSIWAKEESADRTFEMDLLAI---I----EGH-----ENEVKGVAWSNDGYYLATCSR-D 128 (330)
T ss_dssp EEEECTTSSEEEEEET-TSCEEEEEC-------CCCEEEEE---E----C---------CEEEEEECTTSCEEEEEET-T
T ss_pred EEEECCCCCEEEEEeC-CCcEEEEEcccCcCccccceeEEE---E----cCC-----CCcEEEEEECCCCCEEEEEeC-C
Confidence 3789999998877765 788888876321 1 1222221 1 111 034689999999999976664 7
Q ss_pred CcEEEEEecCCC-CCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 80 GDIRQYNIEDPK-NPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 80 ~sI~vf~i~d~~-~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+.|.+|++.... ..+.+..+. |.. +..+.++++|+|++|+.+.
T Consensus 129 ~~v~iwd~~~~~~~~~~~~~~~-----------------------------~h~--~~v~~v~~~p~~~~l~s~s 172 (330)
T 2hes_X 129 KSVWIWETDESGEEYECISVLQ-----------------------------EHS--QDVKHVIWHPSEALLASSS 172 (330)
T ss_dssp SCEEEEECCTTCCCCEEEEEEC-----------------------------CCS--SCEEEEEECSSSSEEEEEE
T ss_pred CEEEEEeccCCCCCeEEEEEec-----------------------------cCC--CceEEEEECCCCCEEEEEc
Confidence 899999994322 223322111 110 1257889999999888774
No 181
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.51 E-value=0.0017 Score=60.33 Aligned_cols=100 Identities=14% Similarity=0.103 Sum_probs=64.4
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|+|+|+++.... +.+|.++... +++.. . ++ .+.. .....+.+||||++|-... .++.|+
T Consensus 23 ~~~~spdg~~l~~~~--~~~v~l~~~~-~~~~~--~---~~----~~h~-----~~v~~~~~spdg~~lasg~-~d~~v~ 84 (611)
T 1nr0_A 23 VLGNTPAGDKIQYCN--GTSVYTVPVG-SLTDT--E---IY----TEHS-----HQTTVAKTSPSGYYCASGD-VHGNVR 84 (611)
T ss_dssp CCEECTTSSEEEEEE--TTEEEEEETT-CSSCC--E---EE----CCCS-----SCEEEEEECTTSSEEEEEE-TTSEEE
T ss_pred EEeeCCCCCEEEeCC--CCEEEEecCC-CcccC--e---Ee----cCCC-----CceEEEEECCCCcEEEEEe-CCCCEE
Confidence 468999998776665 5688887653 33221 1 11 1210 3468999999999996555 478999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++.. ....+...... . .+.-+.+++||||++|.++.
T Consensus 85 lWd~~~-~~~~~~~~~~~-----------------------------~--~~~v~~v~fs~dg~~l~~~~ 122 (611)
T 1nr0_A 85 IWDTTQ-TTHILKTTIPV-----------------------------F--SGPVKDISWDSESKRIAAVG 122 (611)
T ss_dssp EEESSS-TTCCEEEEEEC-----------------------------S--SSCEEEEEECTTSCEEEEEE
T ss_pred EeECCC-CcceeeEeecc-----------------------------c--CCceEEEEECCCCCEEEEEE
Confidence 999853 23333222211 0 11257899999999998875
No 182
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.46 E-value=0.0014 Score=55.59 Aligned_cols=102 Identities=14% Similarity=0.069 Sum_probs=64.7
Q ss_pred eEEEcC--CCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCc
Q 027522 4 RFLHDP--SKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGD 81 (222)
Q Consensus 4 r~afhP--~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~s 81 (222)
-++||| +++++...+ .+.+|.+|... .++. .+..... .. .....+.+||||++|.+.. ..+.
T Consensus 130 ~~~~~~~~~~~~l~s~s-~dg~i~~wd~~-~~~~--~~~~~~~---~~--------~~i~~~~~~pdg~~lasg~-~dg~ 193 (343)
T 3lrv_A 130 YMYGHNEVNTEYFIWAD-NRGTIGFQSYE-DDSQ--YIVHSAK---SD--------VEYSSGVLHKDSLLLALYS-PDGI 193 (343)
T ss_dssp EEECCC---CCEEEEEE-TTCCEEEEESS-SSCE--EEEECCC---SS--------CCCCEEEECTTSCEEEEEC-TTSC
T ss_pred EEEcCCCCCCCEEEEEe-CCCcEEEEECC-CCcE--EEEEecC---CC--------CceEEEEECCCCCEEEEEc-CCCE
Confidence 368899 888877666 48889988774 3333 2221111 01 2357899999999998765 4689
Q ss_pred EEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 82 IRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 82 I~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
|.+|++...... . ..+. +.+ .+..+.++++|+|++|+++.
T Consensus 194 i~iwd~~~~~~~-~-~~~~-----------------------------~~h-~~~v~~l~fs~~g~~l~s~~ 233 (343)
T 3lrv_A 194 LDVYNLSSPDQA-S-SRFP-----------------------------VDE-EAKIKEVKFADNGYWMVVEC 233 (343)
T ss_dssp EEEEESSCTTSC-C-EECC-----------------------------CCT-TSCEEEEEECTTSSEEEEEE
T ss_pred EEEEECCCCCCC-c-cEEe-----------------------------ccC-CCCEEEEEEeCCCCEEEEEe
Confidence 999999542211 0 1111 100 11267899999999998886
No 183
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.46 E-value=0.00057 Score=62.17 Aligned_cols=86 Identities=23% Similarity=0.286 Sum_probs=54.8
Q ss_pred ceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCe
Q 027522 59 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 138 (222)
Q Consensus 59 ~~adI~iSpDgrfLYvSnRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr 138 (222)
.+-.|.+|||||+|||+....+.|.+|+++. .+++... .+ + . +.|.|.
T Consensus 222 ~pNGia~spDg~~lYvadt~~~~I~~~~~~~--~g~l~~~-~~---~---------~-----------------~~g~PD 269 (355)
T 3sre_A 222 FANGINISPDGKYVYIAELLAHKIHVYEKHA--NWTLTPL-RV---L---------S-----------------FDTLVD 269 (355)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECT--TSCEEEE-EE---E---------E-----------------CSSEEE
T ss_pred ccCcceECCCCCEEEEEeCCCCeEEEEEECC--CCcEecC-EE---E---------e-----------------CCCCCc
Confidence 4578999999999999999999999999954 2444211 11 0 0 113399
Q ss_pred eEEECC-CCCEEEEEeCCCCcccc-ccccccccCCcEEEEEEe
Q 027522 139 MIQLSL-DGKRLYVTNSLFSAWDC-QFYPELKEKGSHMLQIDV 179 (222)
Q Consensus 139 ~~~lsp-dGk~LyvaNsl~~~wd~-Q~yp~~~s~~~~i~~~dv 179 (222)
.|++++ +|+ ||||+. +..+.- .+-|+. ..+..++|+..
T Consensus 270 Gi~vD~e~G~-lwva~~-~~g~~v~~~~P~~-~~~s~v~rI~~ 309 (355)
T 3sre_A 270 NISVDPVTGD-LWVGCH-PNGMRIFFYDAEN-PPGSEVLRIQD 309 (355)
T ss_dssp EEEECTTTCC-EEEEEE-SCHHHHHSCCTTS-CCCEEEEEEEC
T ss_pred eEEEeCCCCc-EEEEec-CCceEEEEECCCC-CCCCEEEEEEc
Confidence 999999 597 777541 111110 111221 34778888854
No 184
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.45 E-value=0.00064 Score=57.38 Aligned_cols=105 Identities=10% Similarity=0.017 Sum_probs=63.2
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCC-eeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGS-WNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDI 82 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~-~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI 82 (222)
-++|+|++++++...+ +.+|.+|.... +. +.... .+.. .. .....+.+|||+++|+++.. .+.|
T Consensus 60 ~~~~s~~~~~l~s~s~-d~~v~vwd~~~-~~~~~~~~--~~~~--~~--------~~v~~~~~~~~~~~l~~~~~-d~~i 124 (377)
T 3dwl_C 60 CVDWAPKSNRIVTCSQ-DRNAYVYEKRP-DGTWKQTL--VLLR--LN--------RAATFVRWSPNEDKFAVGSG-ARVI 124 (377)
T ss_dssp EEEECTTTCCEEEEET-TSSEEEC-------CCCCEE--ECCC--CS--------SCEEEEECCTTSSCCEEEES-SSCE
T ss_pred EEEEeCCCCEEEEEeC-CCeEEEEEcCC-CCceeeee--Eecc--cC--------CceEEEEECCCCCEEEEEec-CCeE
Confidence 4689999998887775 78888887642 22 22221 1111 11 44689999999999988775 6789
Q ss_pred EEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 83 RQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 83 ~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
.+|++.......+...+. +. -.+....++++|||++|+++.
T Consensus 125 ~iwd~~~~~~~~~~~~~~-----------------------------~~-h~~~v~~~~~~~~~~~l~~~~ 165 (377)
T 3dwl_C 125 SVCYFEQENDWWVSKHLK-----------------------------RP-LRSTILSLDWHPNNVLLAAGC 165 (377)
T ss_dssp EECCC-----CCCCEEEC-----------------------------SS-CCSCEEEEEECTTSSEEEEEE
T ss_pred EEEEECCcccceeeeEee-----------------------------cc-cCCCeEEEEEcCCCCEEEEEe
Confidence 999885422111111111 10 012267899999999998886
No 185
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.43 E-value=0.0063 Score=50.10 Aligned_cols=104 Identities=11% Similarity=0.027 Sum_probs=64.7
Q ss_pred eEEEcCC---C-CeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCC----CCEEEEE
Q 027522 4 RFLHDPS---K-DIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLD----DRFLYFS 75 (222)
Q Consensus 4 r~afhP~---g-~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpD----grfLYvS 75 (222)
.++|+|+ + ..+++.+. +.+|.+|...........+....+. .. .....+.+||| |++|+++
T Consensus 23 ~i~~~p~~~~~~~~~~~~~~-~~~v~vw~~~~~~~~~~~~~~~~~~--~~--------~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 23 GVQFNWHSKEGDPLVFATVG-SNRVTLYECHSQGEIRLLQSYVDAD--AD--------ENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEEECTTCCTTSCEEEEEEE-TTEEEEEEECGGGCEEEEEEEECSC--TT--------CCEEEEEEEECTTTCCEEEEEE
T ss_pred EEEEecccCCCCceEEEECC-CCEEEEEEcCCCcEEEeeeeccccC--CC--------CcEEEEEeccCCCCCCCEEEEe
Confidence 4789984 4 44555554 5589999875333333333222111 11 44689999999 6677766
Q ss_pred eCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECC-CCCEEEEEe
Q 027522 76 NWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSL-DGKRLYVTN 153 (222)
Q Consensus 76 nRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lsp-dGk~LyvaN 153 (222)
. ..+.|.+|++.. ++++..+.. . .. ..+.++++| +|++|+++.
T Consensus 92 ~-~dg~i~v~d~~~---~~~~~~~~~--~-------------------------~~----~i~~~~~~~~~~~~l~s~~ 135 (366)
T 3k26_A 92 G-SRGIIRIINPIT---MQCIKHYVG--H-------------------------GN----AINELKFHPRDPNLLLSVS 135 (366)
T ss_dssp E-TTCEEEEECTTT---CCEEEEEES--C-------------------------CS----CEEEEEECSSCTTEEEEEE
T ss_pred c-CCCEEEEEEchh---ceEeeeecC--C-------------------------CC----cEEEEEECCCCCCEEEEEe
Confidence 6 467999998743 445433331 0 11 267899999 899888876
No 186
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.43 E-value=0.00086 Score=65.73 Aligned_cols=146 Identities=14% Similarity=0.104 Sum_probs=91.2
Q ss_pred EEcCCCCeEEEEeccCceEEEEEeCC-----CCCe-eEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCC
Q 027522 6 LHDPSKDIGFVGCALASTMVRFSKTQ-----DGSW-NHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH 79 (222)
Q Consensus 6 afhP~g~~aYvv~ELsstV~~~~~d~-----~g~~-~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh 79 (222)
-.+|+|+|+|+..=|+.+|+++..++ ++++ ....++..- ++..-.+-...+.++| +.|.|....
T Consensus 329 ~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae---------~e~GlGPlHt~Fd~~G-~aYTtlfid 398 (638)
T 3sbq_A 329 NTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGE---------PELGLGPLHTTFDGRG-NAYTTLFID 398 (638)
T ss_dssp EECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEEC---------CBCCSCEEEEEECSSS-EEEEEETTT
T ss_pred eeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEee---------ccCCCcccEEEECCCC-ceEeeeeec
Confidence 36899999999999999999998752 1221 111111111 1222456889999999 999999999
Q ss_pred CcEEEEEecCC------CC-CeEEEEEEecceeecCCceeeeeCCCCCCCCCC-ccccCcccCCCCeeEEECCCCCEEEE
Q 027522 80 GDIRQYNIEDP------KN-PVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDV-PEVQGHRLRGGPQMIQLSLDGKRLYV 151 (222)
Q Consensus 80 ~sI~vf~i~d~------~~-~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~-~~v~G~~~~ggPr~~~lspdGk~Lyv 151 (222)
..|+.|+|+.. ++ -..++++.+. +||-. ....|. +..||||||++
T Consensus 399 SqvvkWni~~a~~~~~g~~~~~v~~k~dv~------------------YqpGH~~~~~ge---------t~~~dGk~lv~ 451 (638)
T 3sbq_A 399 SQVVKWNMEEAVRAYKGEKVNYIKQKLDVH------------------YQPGHLHASLCE---------TNEADGKWLVA 451 (638)
T ss_dssp TEEEEEEHHHHHHHHTTCCCCCEEEEEECS------------------SCEEEEEETTTT---------STTCCSCEEEE
T ss_pred ceEEEEeccHHHHHhcCccCCeeeeccccc------------------cCCcccccCCCc---------cCCCCccEEEE
Confidence 99999999642 11 1355666662 33311 111222 34899999999
Q ss_pred EeCCCCccccccc-cccccCCcEEEEEEeeCCCCCeeeccceeE
Q 027522 152 TNSLFSAWDCQFY-PELKEKGSHMLQIDVNSEKGGMAINPNFFV 194 (222)
Q Consensus 152 aNsl~~~wd~Q~y-p~~~s~~~~i~~~dvd~~~G~l~~~~~f~v 194 (222)
.| +|-|..| |-+-..-..--.|||. ..+|+|-.++.+
T Consensus 452 ln----K~skdrfl~vGpl~pen~QlidIs--GdkM~lv~D~P~ 489 (638)
T 3sbq_A 452 LS----KFSKDRFLPVGPLHPENDQLIDIS--GDEMKLVHDGPT 489 (638)
T ss_dssp EE----SCCTTSSCCCSSSCCEEEEEEECS--SSSCEEEEEEEE
T ss_pred ec----ccccccCcCCCCCCCCcceeEecC--CCceEEEecCCC
Confidence 99 3333322 2222222333346663 337888877776
No 187
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.42 E-value=0.0064 Score=52.62 Aligned_cols=110 Identities=18% Similarity=0.172 Sum_probs=68.6
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|+|+++++....+ +.+|.+|... .| ...++....+...... ......+.+||||++|++.. ..+.|.
T Consensus 254 ~v~~~p~~~~l~s~s~-D~~i~lwd~~-~~--~~~~~~~~~~~~~~~~-----~~~v~~~~~s~~g~~l~~g~-~dg~i~ 323 (380)
T 3iz6_a 254 SVKFFPDGQRFGTGSD-DGTCRLFDMR-TG--HQLQVYNREPDRNDNE-----LPIVTSVAFSISGRLLFAGY-SNGDCY 323 (380)
T ss_dssp EEEECTTSSEEEEECS-SSCEEEEETT-TT--EEEEEECCCCSSSCCS-----SCSCSEEEECSSSSEEEEEC-TTSCEE
T ss_pred EEEEecCCCeEEEEcC-CCeEEEEECC-CC--cEEEEecccccccccc-----cCceEEEEECCCCCEEEEEE-CCCCEE
Confidence 3689999998777665 8889998764 33 2233333222111110 12357899999999998765 478999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++.. ++.+..+.. . ..|. .+.-..+++||||++|+.+.
T Consensus 324 vwd~~~---~~~~~~~~~--~-----------------------~~~h--~~~v~~l~~s~dg~~l~sgs 363 (380)
T 3iz6_a 324 VWDTLL---AEMVLNLGT--L-----------------------QNSH--EGRISCLGLSSDGSALCTGS 363 (380)
T ss_dssp EEETTT---CCEEEEECC--S-----------------------CSSC--CCCCCEEEECSSSSEEEEEC
T ss_pred EEECCC---CceEEEEec--c-----------------------cCCC--CCceEEEEECCCCCEEEEee
Confidence 998743 333222211 0 0011 12267899999999987775
No 188
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.40 E-value=0.0064 Score=50.06 Aligned_cols=102 Identities=12% Similarity=0.048 Sum_probs=65.6
Q ss_pred eEEEcCC----CCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcC-CCCEEEEEeCC
Q 027522 4 RFLHDPS----KDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISL-DDRFLYFSNWL 78 (222)
Q Consensus 4 r~afhP~----g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSp-DgrfLYvSnRg 78 (222)
.++|+|+ ++++++.++ +++|.+|... +++. .+.+... . .....|.+|| |+++|+++..
T Consensus 74 ~~~~~~~~~~~~~~l~~~~~-dg~i~v~d~~-~~~~--~~~~~~~----~--------~~i~~~~~~~~~~~~l~s~~~- 136 (366)
T 3k26_A 74 TCAWTYDSNTSHPLLAVAGS-RGIIRIINPI-TMQC--IKHYVGH----G--------NAINELKFHPRDPNLLLSVSK- 136 (366)
T ss_dssp EEEEEECTTTCCEEEEEEET-TCEEEEECTT-TCCE--EEEEESC----C--------SCEEEEEECSSCTTEEEEEET-
T ss_pred EEEeccCCCCCCCEEEEecC-CCEEEEEEch-hceE--eeeecCC----C--------CcEEEEEECCCCCCEEEEEeC-
Confidence 4678888 556666665 7788888653 3322 2222211 1 4568999999 8898877765
Q ss_pred CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 79 HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 79 h~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
.+.|.+|++.. ++.+..+..- .+ -.+..+.++++|+|++|+++.
T Consensus 137 dg~i~iwd~~~---~~~~~~~~~~--------------------------~~--~~~~v~~~~~~~~~~~l~~~~ 180 (366)
T 3k26_A 137 DHALRLWNIQT---DTLVAIFGGV--------------------------EG--HRDEVLSADYDLLGEKIMSCG 180 (366)
T ss_dssp TSCEEEEETTT---TEEEEEECST--------------------------TS--CSSCEEEEEECTTSSEEEEEE
T ss_pred CCeEEEEEeec---CeEEEEeccc--------------------------cc--ccCceeEEEECCCCCEEEEec
Confidence 77899999843 4443222110 00 012278999999999999887
No 189
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.39 E-value=0.0013 Score=61.23 Aligned_cols=70 Identities=9% Similarity=0.105 Sum_probs=44.6
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEE-EEcCCCCEEEEEeCCCC--
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDF-LISLDDRFLYFSNWLHG-- 80 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI-~iSpDgrfLYvSnRgh~-- 80 (222)
-++|+|+|+++|+.++ +.++.++.++.+|+ .+ .+... . .....+ .+||||++||++...++
T Consensus 341 ~~~~spdg~~~~~~~~-~g~~~l~~~~~~~~---~~--~l~~~---~-------~~v~~~~~~s~dg~~l~~~~~~~~~~ 404 (741)
T 2ecf_A 341 SLRFLDDGSILWSSER-TGFQHLYRIDSKGK---AA--ALTHG---N-------WSVDELLAVDEKAGLAYFRAGIESAR 404 (741)
T ss_dssp CCEECTTSCEEEEECT-TSSCEEEEECSSSC---EE--ESCCS---S-------SCEEEEEEEETTTTEEEEEECSSCTT
T ss_pred ceEECCCCeEEEEecC-CCccEEEEEcCCCC---ee--eeeec---c-------eEEEeEeEEeCCCCEEEEEEeCCCCc
Confidence 3689999996665544 66666666654444 12 22211 1 223455 59999999988776555
Q ss_pred cEEEEEecC
Q 027522 81 DIRQYNIED 89 (222)
Q Consensus 81 sI~vf~i~d 89 (222)
.+.+|+++.
T Consensus 405 ~~~l~~~~~ 413 (741)
T 2ecf_A 405 ESQIYAVPL 413 (741)
T ss_dssp CBEEEEEET
T ss_pred eEEEEEEEc
Confidence 888999853
No 190
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.38 E-value=0.0011 Score=59.83 Aligned_cols=107 Identities=11% Similarity=-0.010 Sum_probs=67.3
Q ss_pred eEEEcCCCCeEEE---EeccCceEEEEEeCC--CCCe---eEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEE
Q 027522 4 RFLHDPSKDIGFV---GCALASTMVRFSKTQ--DGSW---NHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFS 75 (222)
Q Consensus 4 r~afhP~g~~aYv---v~ELsstV~~~~~d~--~g~~---~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvS 75 (222)
-++|+|+|++++| .+.-+.+|.+|.... .+.. .....+.+.... . ....+|..||++..+++|
T Consensus 97 ~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h-~--------~~V~~v~~~p~~~~~las 167 (434)
T 2oit_A 97 HLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDA-G--------GMVIDMKWNPTVPSMVAV 167 (434)
T ss_dssp EEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSG-G--------GSEEEEEECSSCTTEEEE
T ss_pred EEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCC-C--------CceEEEEECCCCCCEEEE
Confidence 4689999999998 556688888886531 1111 111122222111 1 346899999996555566
Q ss_pred eCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 76 NWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 76 nRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+-..+.|.+|++.. ++.+ +...+ .... .+.+++||||++|++++
T Consensus 168 ~s~Dg~v~iwD~~~---~~~~--~~~~~-------------------------~~~~----v~~v~wspdg~~lasgs 211 (434)
T 2oit_A 168 CLADGSIAVLQVTE---TVKV--CATLP-------------------------STVA----VTSVCWSPKGKQLAVGK 211 (434)
T ss_dssp EETTSCEEEEEESS---SEEE--EEEEC-------------------------GGGC----EEEEEECTTSSCEEEEE
T ss_pred EECCCeEEEEEcCC---Ccce--eeccC-------------------------CCCc----eeEEEEcCCCCEEEEEc
Confidence 66789999999954 2221 11100 0122 78899999999999986
No 191
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.38 E-value=0.0077 Score=51.14 Aligned_cols=101 Identities=13% Similarity=0.043 Sum_probs=66.2
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
-++|+|+++++.+..+ +.+|.+|.... +. ..... .... .......+.+||||++|.++. ..+.|.
T Consensus 231 ~v~~~p~~~~l~s~s~-d~~v~iwd~~~-~~--~~~~~--~~~~--------~~~~v~~~~~s~~g~~l~~g~-~d~~i~ 295 (340)
T 1got_B 231 AICFFPNGNAFATGSD-DATCRLFDLRA-DQ--ELMTY--SHDN--------IICGITSVSFSKSGRLLLAGY-DDFNCN 295 (340)
T ss_dssp EEEECTTSSEEEEEET-TSCEEEEETTT-TE--EEEEE--CCTT--------CCSCEEEEEECTTSSEEEEEE-TTSEEE
T ss_pred EEEEcCCCCEEEEEcC-CCcEEEEECCC-Cc--EEEEE--ccCC--------cccceEEEEECCCCCEEEEEC-CCCeEE
Confidence 3689999998887765 78898887642 21 11221 1111 013468899999999998776 467899
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++.. ++.+..+.. .. +.-..++++|||++|+.+.
T Consensus 296 vwd~~~---~~~~~~~~~-----------------------------h~--~~v~~~~~s~dg~~l~s~s 331 (340)
T 1got_B 296 VWDALK---ADRAGVLAG-----------------------------HD--NRVSCLGVTDDGMAVATGS 331 (340)
T ss_dssp EEETTT---CCEEEEEEC-----------------------------CS--SCEEEEEECTTSSCEEEEE
T ss_pred EEEccc---CcEeeEeec-----------------------------CC--CcEEEEEEcCCCCEEEEEc
Confidence 999843 333332221 10 1156799999999988776
No 192
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.37 E-value=0.0052 Score=54.57 Aligned_cols=63 Identities=10% Similarity=0.005 Sum_probs=41.9
Q ss_pred EEEcCC---CCeEEEEecc---C----ceEEEEEeCC-CCCeeEEEEE-EecCcccccccCCCCCCceeEEEEcCCCCEE
Q 027522 5 FLHDPS---KDIGFVGCAL---A----STMVRFSKTQ-DGSWNHEVAI-SVKSLKVQNWILPEMPGLITDFLISLDDRFL 72 (222)
Q Consensus 5 ~afhP~---g~~aYvv~EL---s----stV~~~~~d~-~g~~~~~q~i-s~~p~~~~g~~~~~~~~~~adI~iSpDgrfL 72 (222)
++|||+ +.++||.+.- + +.|.++..+. ++.+...+++ +-.|.. +. ..+..|.++|||+ |
T Consensus 78 ia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~--~~------h~~~~l~~~pDG~-L 148 (354)
T 3a9g_A 78 LALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGA--YI------HNGGRIRFGPDGM-L 148 (354)
T ss_dssp EEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECC--SS------CCCCCEEECTTSC-E
T ss_pred EEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCC--CC------cCCceEEECCCCc-E
Confidence 689998 8899998763 3 6799998753 2355544443 312211 11 2357899999995 9
Q ss_pred EEEe
Q 027522 73 YFSN 76 (222)
Q Consensus 73 YvSn 76 (222)
|++.
T Consensus 149 yvt~ 152 (354)
T 3a9g_A 149 YITT 152 (354)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 9996
No 193
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.36 E-value=0.0068 Score=52.18 Aligned_cols=100 Identities=16% Similarity=0.137 Sum_probs=65.0
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++|+|+++++.+.+. +.+|.+|.... +. ...... .... ......+.+||||++|+++. ..+.|.+
T Consensus 246 v~~~p~~~~l~s~s~-D~~v~lwd~~~-~~--~~~~~~--~~~~--------~~~~~~~~~s~~g~~l~~g~-~d~~i~v 310 (354)
T 2pbi_B 246 VRYYPSGDAFASGSD-DATCRLYDLRA-DR--EVAIYS--KESI--------IFGASSVDFSLSGRLLFAGY-NDYTINV 310 (354)
T ss_dssp EEECTTSSEEEEEET-TSCEEEEETTT-TE--EEEEEC--CTTC--------CSCEEEEEECTTSSEEEEEE-TTSCEEE
T ss_pred EEEeCCCCEEEEEeC-CCeEEEEECCC-Cc--EEEEEc--CCCc--------ccceeEEEEeCCCCEEEEEE-CCCcEEE
Confidence 689999998777664 88898887642 21 111111 1110 12357899999999998876 4679999
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
|++.. ++.+..+. | . .+....+++||||++|..+.
T Consensus 311 wd~~~---~~~~~~l~--~---------------------------h--~~~v~~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 311 WDVLK---GSRVSILF--G---------------------------H--ENRVSTLRVSPDGTAFCSGS 345 (354)
T ss_dssp EETTT---CSEEEEEC--C---------------------------C--SSCEEEEEECTTSSCEEEEE
T ss_pred EECCC---CceEEEEE--C---------------------------C--CCcEEEEEECCCCCEEEEEc
Confidence 99843 33332221 1 1 01257899999999988876
No 194
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.34 E-value=0.0045 Score=51.78 Aligned_cols=82 Identities=12% Similarity=0.117 Sum_probs=50.0
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCC-CCeeEEEEEEecCcccc---cccCCCCCCceeEEEEcCCCCEEEEEeCCC
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQD-GSWNHEVAISVKSLKVQ---NWILPEMPGLITDFLISLDDRFLYFSNWLH 79 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~-g~~~~~q~is~~p~~~~---g~~~~~~~~~~adI~iSpDgrfLYvSnRgh 79 (222)
-++|+|++++.++.+-.+++|.+|..... .... .+........ -.....-......|.+||||++|+++. ..
T Consensus 191 ~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d 266 (408)
T 4a11_B 191 AVSWSPRYDYILATASADSRVKLWDVRRASGCLI---TLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG-TD 266 (408)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTCSSCCSE---ECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEE-TT
T ss_pred EEEECCCCCcEEEEEcCCCcEEEEECCCCCcccc---cccccccccceeeccccccccCceeEEEEcCCCCEEEEec-CC
Confidence 47899999986666666888999876421 1111 1100000000 000011124578999999999998776 46
Q ss_pred CcEEEEEecC
Q 027522 80 GDIRQYNIED 89 (222)
Q Consensus 80 ~sI~vf~i~d 89 (222)
+.|.+|++..
T Consensus 267 g~i~vwd~~~ 276 (408)
T 4a11_B 267 NRMRLWNSSN 276 (408)
T ss_dssp SCEEEEETTT
T ss_pred CeEEEEECCC
Confidence 7899999854
No 195
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.33 E-value=0.0048 Score=52.94 Aligned_cols=75 Identities=9% Similarity=0.092 Sum_probs=51.5
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCC-CEEEEEeCCCCcEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDD-RFLYFSNWLHGDIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDg-rfLYvSnRgh~sI~ 83 (222)
++|+|+++++... . +.+|.+|..... -...+.+.+.+..+.+. ......+.+|||+ ++|+++. ..+.|.
T Consensus 183 ~~~~~~~~~l~s~-~-d~~i~iwd~~~~--~~~~~~~~~~~~~~~~~-----~~~v~~~~~~p~~~~~l~s~~-~dg~i~ 252 (447)
T 3dw8_B 183 ISINSDYETYLSA-D-DLRINLWHLEIT--DRSFNIVDIKPANMEEL-----TEVITAAEFHPNSCNTFVYSS-SKGTIR 252 (447)
T ss_dssp EEECTTSSEEEEE-C-SSEEEEEETTEE--EEEEEEEECCCSSGGGC-----CCCEEEEEECSSCTTEEEEEE-TTSCEE
T ss_pred EEEcCCCCEEEEe-C-CCeEEEEECCCC--Cceeeeeeccccccccc-----CcceEEEEECCCCCcEEEEEe-CCCeEE
Confidence 6799999988876 4 899999976421 22334444444333332 2557899999999 7776665 478999
Q ss_pred EEEecC
Q 027522 84 QYNIED 89 (222)
Q Consensus 84 vf~i~d 89 (222)
+|++..
T Consensus 253 iwd~~~ 258 (447)
T 3dw8_B 253 LCDMRA 258 (447)
T ss_dssp EEETTT
T ss_pred EEECcC
Confidence 999854
No 196
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.33 E-value=0.002 Score=55.29 Aligned_cols=82 Identities=9% Similarity=0.106 Sum_probs=48.3
Q ss_pred eEEEcCCC-CeEEEEeccCceEEEEEeCCCCCeeE--EEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCC
Q 027522 4 RFLHDPSK-DIGFVGCALASTMVRFSKTQDGSWNH--EVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHG 80 (222)
Q Consensus 4 r~afhP~g-~~aYvv~ELsstV~~~~~d~~g~~~~--~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~ 80 (222)
-++|+|++ +++++.++ +++|.+|... +++... .+.+...........+.........|.+||||++|.++.. +
T Consensus 231 ~~~~~p~~~~~l~s~~~-dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~ 306 (447)
T 3dw8_B 231 AAEFHPNSCNTFVYSSS-KGTIRLCDMR-ASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY--L 306 (447)
T ss_dssp EEEECSSCTTEEEEEET-TSCEEEEETT-TCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES--S
T ss_pred EEEECCCCCcEEEEEeC-CCeEEEEECc-CCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC--C
Confidence 47899999 66666655 7889988764 232200 1122111000000000000025689999999999998876 8
Q ss_pred cEEEEEecC
Q 027522 81 DIRQYNIED 89 (222)
Q Consensus 81 sI~vf~i~d 89 (222)
.|.+|++..
T Consensus 307 ~v~iwd~~~ 315 (447)
T 3dw8_B 307 SVKVWDLNM 315 (447)
T ss_dssp EEEEEETTC
T ss_pred eEEEEeCCC
Confidence 999999953
No 197
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.31 E-value=0.014 Score=53.58 Aligned_cols=115 Identities=16% Similarity=0.164 Sum_probs=76.4
Q ss_pred cCC-CC-eEEEEeccCceEEEEEe--CCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 8 DPS-KD-IGFVGCALASTMVRFSK--TQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 8 hP~-g~-~aYvv~ELsstV~~~~~--d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
+|. ++ ++||.++- ..+..|.. +.+|+.+.+.+-++.- ++.+-.|.+.+...+||++....+ |+
T Consensus 138 ~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~l-----------gsq~EgcvvDd~~g~Lyv~eEd~G-Iw 204 (355)
T 3amr_A 138 SQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFKM-----------NSQTEGMAADDEYGRLYIAEEDEA-IW 204 (355)
T ss_dssp CTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEEC-----------SSCEEEEEEETTTTEEEEEETTTE-EE
T ss_pred cCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEecC-----------CCCcceEEEcCCCCeEEEecccce-EE
Confidence 664 44 79999985 67777654 3466666655444321 134578999999999999999866 88
Q ss_pred EEEecCCC---CCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEE--CCCCC-EEEEEeCCCC
Q 027522 84 QYNIEDPK---NPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQL--SLDGK-RLYVTNSLFS 157 (222)
Q Consensus 84 vf~i~d~~---~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~l--spdGk-~LyvaNsl~~ 157 (222)
.|+.+ |. +++++..+. +.++...|--|+| .++|+ ||+|+|
T Consensus 205 ~~da~-p~~~~~~~~v~~~~-----------------------------~g~l~aDvEGLai~~~~~g~gyLivSs---- 250 (355)
T 3amr_A 205 KFSAE-PDGGSNGTVIDRAD-----------------------------GRHLTRDIEGLTIYYAADGKGYLMASS---- 250 (355)
T ss_dssp EEECS-TTSCSCCEEEEEBS-----------------------------SSSBCSCEEEEEEEECGGGCEEEEEEE----
T ss_pred EEeCC-cCCCCCceEEEEec-----------------------------CCccccCcceEEEEecCCCCEEEEEEc----
Confidence 88763 33 355654332 2233334778888 67888 899999
Q ss_pred ccccccccccccCCcEEEEEEee
Q 027522 158 AWDCQFYPELKEKGSHMLQIDVN 180 (222)
Q Consensus 158 ~wd~Q~yp~~~s~~~~i~~~dvd 180 (222)
|. +.++..+|..
T Consensus 251 ----QG-------~~s~~Vydr~ 262 (355)
T 3amr_A 251 ----QG-------NSSYAIYDRQ 262 (355)
T ss_dssp ----GG-------GTEEEEEESS
T ss_pred ----CC-------CCEEEEEECC
Confidence 74 4566666653
No 198
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.31 E-value=0.0035 Score=55.11 Aligned_cols=99 Identities=10% Similarity=0.219 Sum_probs=66.5
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|||+++++....+ +.+|.+|... +|+.. +++ .+. .....+|.+||||++|..+. .++.|.
T Consensus 113 ~~~~~p~~~~l~s~s~-Dg~i~vwd~~-~~~~~--~~l-------~~h-----~~~V~~v~~~~~~~~l~sgs-~D~~i~ 175 (410)
T 1vyh_C 113 RVIFHPVFSVMVSASE-DATIKVWDYE-TGDFE--RTL-------KGH-----TDSVQDISFDHSGKLLASCS-ADMTIK 175 (410)
T ss_dssp EEEECSSSSEEEEEES-SSCEEEEETT-TCCCC--EEE-------CCC-----SSCEEEEEECTTSSEEEEEE-TTSCCC
T ss_pred EEEEcCCCCEEEEEeC-CCeEEEEECC-CCcEE--EEE-------ecc-----CCcEEEEEEcCCCCEEEEEe-CCCeEE
Confidence 5789999998887776 8899999874 34332 221 111 03468999999999887665 578999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++.. .+.+..+. |.. +.-..++++|+|++|+.+.
T Consensus 176 iwd~~~---~~~~~~~~-----------------------------~h~--~~V~~v~~~p~~~~l~s~s 211 (410)
T 1vyh_C 176 LWDFQG---FECIRTMH-----------------------------GHD--HNVSSVSIMPNGDHIVSAS 211 (410)
T ss_dssp EEETTS---SCEEECCC-----------------------------CCS--SCEEEEEECSSSSEEEEEE
T ss_pred EEeCCC---CceeEEEc-----------------------------CCC--CCEEEEEEeCCCCEEEEEe
Confidence 999843 33321111 110 1256789999999998775
No 199
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.29 E-value=0.0094 Score=50.77 Aligned_cols=76 Identities=17% Similarity=0.160 Sum_probs=52.0
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|+|+++++++..+ +.+|.+|... +++. .+.+. +. ......+.+|||+++|+.+.. .+.|.
T Consensus 144 ~~~~~~~~~~l~s~s~-d~~i~iwd~~-~~~~--~~~~~-------~h-----~~~v~~~~~~~~~~~l~s~~~-d~~v~ 206 (420)
T 3vl1_A 144 KLKFFPSGEALISSSQ-DMQLKIWSVK-DGSN--PRTLI-------GH-----RATVTDIAIIDRGRNVLSASL-DGTIR 206 (420)
T ss_dssp EEEECTTSSEEEEEET-TSEEEEEETT-TCCC--CEEEE-------CC-----SSCEEEEEEETTTTEEEEEET-TSCEE
T ss_pred EEEECCCCCEEEEEeC-CCeEEEEeCC-CCcC--ceEEc-------CC-----CCcEEEEEEcCCCCEEEEEcC-CCcEE
Confidence 4789999998887775 7889888764 3322 12221 11 144689999999999987664 67899
Q ss_pred EEEecCCCCCeEEEEE
Q 027522 84 QYNIEDPKNPVLTGQI 99 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v 99 (222)
+|++.. ++.+..+
T Consensus 207 iwd~~~---~~~~~~~ 219 (420)
T 3vl1_A 207 LWECGT---GTTIHTF 219 (420)
T ss_dssp EEETTT---TEEEEEE
T ss_pred EeECCC---CceeEEe
Confidence 999843 4454443
No 200
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.27 E-value=0.023 Score=47.43 Aligned_cols=68 Identities=15% Similarity=0.151 Sum_probs=48.6
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++|+|+++++.+..+ +.+|.+|... +|+. ...+. +. ......|.+|||+++|..+. ..+.|.+
T Consensus 61 ~~~~~~~~~l~s~s~-d~~i~vwd~~-~~~~--~~~~~-------~h-----~~~v~~~~~~~~~~~l~sgs-~D~~v~l 123 (304)
T 2ynn_A 61 GKFIARKNWIIVGSD-DFRIRVFNYN-TGEK--VVDFE-------AH-----PDYIRSIAVHPTKPYVLSGS-DDLTVKL 123 (304)
T ss_dssp EEEEGGGTEEEEEET-TSEEEEEETT-TCCE--EEEEE-------CC-----SSCEEEEEECSSSSEEEEEE-TTSCEEE
T ss_pred EEEeCCCCEEEEECC-CCEEEEEECC-CCcE--EEEEe-------CC-----CCcEEEEEEcCCCCEEEEEC-CCCeEEE
Confidence 578999999888776 7889888764 3432 22221 11 14468999999999997665 5789999
Q ss_pred EEecC
Q 027522 85 YNIED 89 (222)
Q Consensus 85 f~i~d 89 (222)
|++..
T Consensus 124 Wd~~~ 128 (304)
T 2ynn_A 124 WNWEN 128 (304)
T ss_dssp EEGGG
T ss_pred EECCC
Confidence 99954
No 201
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.27 E-value=0.0019 Score=55.89 Aligned_cols=100 Identities=12% Similarity=0.022 Sum_probs=62.2
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|+|++...++..-.+.+|.+|... +++. .+..... . .....|.+|||++.+.+|.-..+.|+
T Consensus 231 ~v~~sp~~~~~la~g~~d~~i~~wd~~-~~~~--~~~~~~~----~--------~~v~~l~~sp~~~~~lasgs~D~~i~ 295 (357)
T 4g56_B 231 SVTWHPEKDDTFACGDETGNVSLVNIK-NPDS--AQTSAVH----S--------QNITGLAYSYHSSPFLASISEDCTVA 295 (357)
T ss_dssp EEEECTTSTTEEEEEESSSCEEEEESS-CGGG--CEEECCC----S--------SCEEEEEECSSSSCCEEEEETTSCEE
T ss_pred chhhhhcccceEEEeecccceeEEECC-CCcE--eEEEecc----c--------eeEEEEEEcCCCCCEEEEEeCCCEEE
Confidence 478999877666655557888888763 3322 1222111 1 34688999999864445554578999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECC-CCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSL-DGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lsp-dGk~LyvaN 153 (222)
+|++. .++++... |. .+.-+.+++|| ||++|+.+.
T Consensus 296 iwd~~---~~~~~~~~---~H-----------------------------~~~V~~vafsP~d~~~l~s~s 331 (357)
T 4g56_B 296 VLDAD---FSEVFRDL---SH-----------------------------RDFVTGVAWSPLDHSKFTTVG 331 (357)
T ss_dssp EECTT---SCEEEEEC---CC-----------------------------SSCEEEEEECSSSTTEEEEEE
T ss_pred EEECC---CCcEeEEC---CC-----------------------------CCCEEEEEEeCCCCCEEEEEc
Confidence 99874 34553211 11 01257899998 788876665
No 202
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.27 E-value=0.00023 Score=70.38 Aligned_cols=105 Identities=15% Similarity=0.170 Sum_probs=65.6
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCccc-ccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV-QNWILPEMPGLITDFLISLDDRFLYFSNWLHGDI 82 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~-~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI 82 (222)
-++|+|+|+++.+.++ +++|.+|... +|+.. .. +.+... .+. ..-....+.+.+||||++|.+++ +.|
T Consensus 1132 ~~~~s~dg~~lat~~~-dg~i~vwd~~-~~~~~--~~--~~~~~~~~~~--~~~~~~v~~l~fs~dg~~l~s~~---g~v 1200 (1249)
T 3sfz_A 1132 CSAFSLDGILLATGDD-NGEIRIWNVS-DGQLL--HS--CAPISVEEGT--ATHGGWVTDVCFSPDSKTLVSAG---GYL 1200 (1249)
T ss_dssp EEEECSSSSEEEEEET-TSCCCEEESS-SSCCC--CC--CCCCC---------CCSCCCEEEECTTSSCEEEES---SSE
T ss_pred EEEECCCCCEEEEEeC-CCEEEEEECC-CCceE--EE--eccccccccc--cccCceEEEEEECCCCCEEEECC---CeE
Confidence 4789999999988876 6778888764 33221 11 100000 000 00114468999999999998775 799
Q ss_pred EEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 83 RQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 83 ~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
.+|++.. ++.+..+.. .+.. ...+++||||++|+++.
T Consensus 1201 ~vwd~~~---g~~~~~~~~---------------------------~~~~----i~~~~~s~dg~~l~~~~ 1237 (1249)
T 3sfz_A 1201 KWWNVAT---GDSSQTFYT---------------------------NGTN----LKKIHVSPDFRTYVTVD 1237 (1249)
T ss_dssp EEBCSSS---CBCCCCCCC---------------------------SSCC----CCCCEECSSSCCEEEEC
T ss_pred EEEECCC---Cceeeeeec---------------------------cCCc----ccEEEECCCCCEEEEec
Confidence 9998843 322111111 0122 57899999999999887
No 203
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.27 E-value=0.003 Score=56.30 Aligned_cols=69 Identities=16% Similarity=0.150 Sum_probs=46.7
Q ss_pred eEEEcC--CCCeEEEEeccCceEEEEEeCCCC------CeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEE
Q 027522 4 RFLHDP--SKDIGFVGCALASTMVRFSKTQDG------SWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFS 75 (222)
Q Consensus 4 r~afhP--~g~~aYvv~ELsstV~~~~~d~~g------~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvS 75 (222)
-++|+| +++++++.++ +.+|.+|... ++ .......+... . .....+.+||||++|+++
T Consensus 69 ~~~~sp~~~~~~l~s~~~-dg~v~vw~~~-~~~~~~~~~~~~~~~~~~~----~--------~~v~~~~~s~~~~~l~~~ 134 (615)
T 1pgu_A 69 TVKFSPIKGSQYLCSGDE-SGKVIVWGWT-FDKESNSVEVNVKSEFQVL----A--------GPISDISWDFEGRRLCVV 134 (615)
T ss_dssp EEEECSSTTCCEEEEEET-TSEEEEEEEE-EEGGGTEEEEEEEEEEECC----S--------SCEEEEEECTTSSEEEEE
T ss_pred EEEECcCCCCCEEEEecC-CCEEEEEeCC-CCcccccccccccchhhcc----c--------ccEEEEEEeCCCCEEEEe
Confidence 478999 9999988877 7888888763 12 12222222211 1 346899999999999998
Q ss_pred eCCC---CcEEEEE
Q 027522 76 NWLH---GDIRQYN 86 (222)
Q Consensus 76 nRgh---~sI~vf~ 86 (222)
.... +.|.+|+
T Consensus 135 ~~~~~~~~~v~~~d 148 (615)
T 1pgu_A 135 GEGRDNFGVFISWD 148 (615)
T ss_dssp ECCSSCSEEEEETT
T ss_pred ccCCCCccEEEEEE
Confidence 8653 4566664
No 204
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.26 E-value=0.014 Score=49.17 Aligned_cols=105 Identities=9% Similarity=0.155 Sum_probs=64.7
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|+|++....+.+-.+.+|.+|..............++ .+.. ....++.+||||++|..+.+ ++.|+
T Consensus 22 ~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~-----~~h~-----~~v~~~~~s~dg~~l~s~s~-D~~v~ 90 (319)
T 3frx_A 22 SLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSF-----KGHS-----HIVQDCTLTADGAYALSASW-DKTLR 90 (319)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEE-----ECCS-----SCEEEEEECTTSSEEEEEET-TSEEE
T ss_pred EEEccCCCccEEEEecCCccEEEecCCCCCccccccceEE-----eCCc-----ccEEEEEECCCCCEEEEEeC-CCEEE
Confidence 3679997744444444588998887642211111111111 2221 34689999999999987764 68999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++.. ++.+..+.. .. +.-..++++|+|++|+.+.
T Consensus 91 ~wd~~~---~~~~~~~~~-----------------------------h~--~~v~~~~~~~~~~~l~s~s 126 (319)
T 3frx_A 91 LWDVAT---GETYQRFVG-----------------------------HK--SDVMSVDIDKKASMIISGS 126 (319)
T ss_dssp EEETTT---TEEEEEEEC-----------------------------CS--SCEEEEEECTTSCEEEEEE
T ss_pred EEECCC---CCeeEEEcc-----------------------------CC--CcEEEEEEcCCCCEEEEEe
Confidence 999843 444333221 10 1156789999999888775
No 205
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.26 E-value=0.0041 Score=51.21 Aligned_cols=81 Identities=14% Similarity=0.158 Sum_probs=51.6
Q ss_pred eEEEcC-CCCeEEEEeccCceEEEEEeCCCC-C--eeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCC
Q 027522 4 RFLHDP-SKDIGFVGCALASTMVRFSKTQDG-S--WNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH 79 (222)
Q Consensus 4 r~afhP-~g~~aYvv~ELsstV~~~~~d~~g-~--~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh 79 (222)
.++|+| +++++++.++ +.+|.++.++..+ . .+....+........+. ........|.+|||+++|+++. ..
T Consensus 198 ~i~~~~~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~-~d 272 (342)
T 1yfq_A 198 DVALLPKEQEGYACSSI-DGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDT---NLAYPVNSIEFSPRHKFLYTAG-SD 272 (342)
T ss_dssp EEEECSGGGCEEEEEET-TSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCC---SSCCCEEEEEECTTTCCEEEEE-TT
T ss_pred EEEECCCCCCEEEEEec-CCcEEEEEEcCCCcccccccceeeeccccccccc---ccceeEEEEEEcCCCCEEEEec-CC
Confidence 468999 9999888887 8889998876431 0 11122222211100110 0013578999999999998776 57
Q ss_pred CcEEEEEecC
Q 027522 80 GDIRQYNIED 89 (222)
Q Consensus 80 ~sI~vf~i~d 89 (222)
+.|.+|++..
T Consensus 273 g~i~vwd~~~ 282 (342)
T 1yfq_A 273 GIISCWNLQT 282 (342)
T ss_dssp SCEEEEETTT
T ss_pred ceEEEEcCcc
Confidence 8999999843
No 206
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.25 E-value=0.0018 Score=64.18 Aligned_cols=100 Identities=20% Similarity=0.225 Sum_probs=64.3
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCC-----
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWL----- 78 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRg----- 78 (222)
.++|+|+|+++++.+. ..+|.++..+ +|+.. +...-. . .....+.+||||++|.++...
T Consensus 383 ~~~~SpDG~~la~~~~-~~~v~~~d~~-tg~~~--~~~~~~----~--------~~v~~~~~SpDG~~la~~~~~~~~~~ 446 (1045)
T 1k32_A 383 AMGVDRNGKFAVVAND-RFEIMTVDLE-TGKPT--VIERSR----E--------AMITDFTISDNSRFIAYGFPLKHGET 446 (1045)
T ss_dssp EEEECTTSSEEEEEET-TSEEEEEETT-TCCEE--EEEECS----S--------SCCCCEEECTTSCEEEEEEEECSSTT
T ss_pred eeEECCCCCEEEEECC-CCeEEEEECC-CCceE--EeccCC----C--------CCccceEECCCCCeEEEEecCccccc
Confidence 4789999999887765 5688888763 45432 222111 1 224678999999998665542
Q ss_pred ----CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeC
Q 027522 79 ----HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNS 154 (222)
Q Consensus 79 ----h~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNs 154 (222)
...|.+|+++. +++ ..+.. .+.. +..+++||||++||++..
T Consensus 447 ~~~~~~~i~l~d~~~---g~~-~~l~~---------------------------~~~~----~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 447 DGYVMQAIHVYDMEG---RKI-FAATT---------------------------ENSH----DYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp CSCCEEEEEEEETTT---TEE-EECSC---------------------------SSSB----EEEEEECTTSCEEEEEES
T ss_pred cCCCCCeEEEEECCC---CcE-EEeeC---------------------------CCcc----cCCceEcCCCCEEEEEec
Confidence 35899998743 332 11111 0122 567899999999998864
No 207
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.25 E-value=0.005 Score=52.15 Aligned_cols=77 Identities=6% Similarity=-0.031 Sum_probs=47.8
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCC---
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHG--- 80 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~--- 80 (222)
-++|+|++...++.+--+.+|.+|... .+ +....+..... ..+. ......|.+|||++.++++.-..+
T Consensus 170 ~~~~~~~~~~~l~~~~~dg~v~iwd~~-~~--~~~~~~~~~~~-~~~~-----~~~v~~~~~~~~~~~~l~~~~~d~~~~ 240 (416)
T 2pm9_A 170 SLAWNQSLAHVFASAGSSNFASIWDLK-AK--KEVIHLSYTSP-NSGI-----KQQLSVVEWHPKNSTRVATATGSDNDP 240 (416)
T ss_dssp EEEECSSCTTEEEEESSSSCEEEEETT-TT--EEEEEECCCCC-SSCC-----CCCEEEEEECSSCTTEEEEEECCSSSC
T ss_pred EEEeCCCCCcEEEEEcCCCCEEEEECC-CC--CcceEEecccc-cccc-----CCceEEEEECCCCCCEEEEEECCCCCc
Confidence 368999965555555568889999764 23 22333322210 0010 145789999999965555554555
Q ss_pred cEEEEEecC
Q 027522 81 DIRQYNIED 89 (222)
Q Consensus 81 sI~vf~i~d 89 (222)
.|.+|++..
T Consensus 241 ~i~~~d~~~ 249 (416)
T 2pm9_A 241 SILIWDLRN 249 (416)
T ss_dssp CCCEEETTS
T ss_pred eEEEEeCCC
Confidence 999999954
No 208
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.24 E-value=0.0091 Score=50.88 Aligned_cols=97 Identities=8% Similarity=0.011 Sum_probs=64.1
Q ss_pred EEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEE
Q 027522 6 LHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQY 85 (222)
Q Consensus 6 afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~vf 85 (222)
+|+|+++++.+... +++|.+|... .+. ...+.... . .....|.+|||+++|+++.. .+.|.+|
T Consensus 104 ~~~~~~~~l~~~~~-dg~i~iwd~~-~~~-----~~~~~~~h-~--------~~v~~~~~~~~~~~l~s~s~-d~~i~iw 166 (420)
T 3vl1_A 104 TAKLQMRRFILGTT-EGDIKVLDSN-FNL-----QREIDQAH-V--------SEITKLKFFPSGEALISSSQ-DMQLKIW 166 (420)
T ss_dssp EECSSSCEEEEEET-TSCEEEECTT-SCE-----EEEETTSS-S--------SCEEEEEECTTSSEEEEEET-TSEEEEE
T ss_pred EEecCCCEEEEEEC-CCCEEEEeCC-Ccc-----eeeecccc-c--------CccEEEEECCCCCEEEEEeC-CCeEEEE
Confidence 68999998777765 7788888653 221 12222111 1 45789999999999987764 6789999
Q ss_pred EecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 86 NIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 86 ~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
++.. ++.+..+.. . . +....++++|||++|+.+.
T Consensus 167 d~~~---~~~~~~~~~--h-------------------------~----~~v~~~~~~~~~~~l~s~~ 200 (420)
T 3vl1_A 167 SVKD---GSNPRTLIG--H-------------------------R----ATVTDIAIIDRGRNVLSAS 200 (420)
T ss_dssp ETTT---CCCCEEEEC--C-------------------------S----SCEEEEEEETTTTEEEEEE
T ss_pred eCCC---CcCceEEcC--C-------------------------C----CcEEEEEEcCCCCEEEEEc
Confidence 9954 222222221 0 1 1257899999999998876
No 209
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.23 E-value=0.012 Score=49.54 Aligned_cols=111 Identities=8% Similarity=-0.009 Sum_probs=61.9
Q ss_pred eEEEc----CCCCe-EEEEeccCceEEEEEeCC------CCCee--EEEEEEe--c-CcccccccCCCCCCceeEEEEcC
Q 027522 4 RFLHD----PSKDI-GFVGCALASTMVRFSKTQ------DGSWN--HEVAISV--K-SLKVQNWILPEMPGLITDFLISL 67 (222)
Q Consensus 4 r~afh----P~g~~-aYvv~ELsstV~~~~~d~------~g~~~--~~q~is~--~-p~~~~g~~~~~~~~~~adI~iSp 67 (222)
-++|+ |++++ +++.++ +.+|.+|.... ..... ....+.. . +... ...+..|.+||
T Consensus 126 ~~~~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~i~~~~~~~ 196 (397)
T 1sq9_A 126 ALKWGASNDRLLSHRLVATDV-KGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTP--------SQFATSVDISE 196 (397)
T ss_dssp EEEEECCC----CEEEEEEET-TSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSS--------CCCCCEEEECT
T ss_pred EEEEeeccCCCCceEEEEEeC-CCcEEEEeCCccccccccceeeccCcceeeeeeccccCC--------CCCceEEEECC
Confidence 36788 99999 666554 78888887643 11111 1111110 0 0000 14468999999
Q ss_pred CCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCC
Q 027522 68 DDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGK 147 (222)
Q Consensus 68 DgrfLYvSnRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk 147 (222)
|+ +|+++ -..+.|.+|++.. ++.+..+.... .++ .... ..+.++++|+|+
T Consensus 197 ~~-~l~~~-~~dg~i~i~d~~~---~~~~~~~~~~~-----------------~h~----~~~~----~i~~i~~~~~~~ 246 (397)
T 1sq9_A 197 RG-LIATG-FNNGTVQISELST---LRPLYNFESQH-----------------SMI----NNSN----SIRSVKFSPQGS 246 (397)
T ss_dssp TS-EEEEE-CTTSEEEEEETTT---TEEEEEEECCC------------------------CCCC----CEEEEEECSSTT
T ss_pred Cc-eEEEE-eCCCcEEEEECCC---CceeEEEeccc-----------------ccc----ccCC----ccceEEECCCCC
Confidence 99 55554 4578999999853 44443333200 000 0011 267899999999
Q ss_pred EEEEEe
Q 027522 148 RLYVTN 153 (222)
Q Consensus 148 ~LyvaN 153 (222)
+|+++.
T Consensus 247 ~l~~~~ 252 (397)
T 1sq9_A 247 LLAIAH 252 (397)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999886
No 210
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.23 E-value=0.0057 Score=51.76 Aligned_cols=102 Identities=10% Similarity=0.063 Sum_probs=61.1
Q ss_pred eEEEcCCCCeEEEEeccCc---eEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcC-CCCEEEEEeCCC
Q 027522 4 RFLHDPSKDIGFVGCALAS---TMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISL-DDRFLYFSNWLH 79 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELss---tV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSp-DgrfLYvSnRgh 79 (222)
.++|+|+++..++.+--+. +|.+|........ +..... +. ......|.+|| |+++|+++.. .
T Consensus 219 ~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~-----~~~~~~---~~-----~~~v~~~~~s~~~~~~l~s~~~-d 284 (416)
T 2pm9_A 219 VVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP-----LQTLNQ---GH-----QKGILSLDWCHQDEHLLLSSGR-D 284 (416)
T ss_dssp EEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC-----SBCCCS---CC-----SSCEEEEEECSSCSSCEEEEES-S
T ss_pred EEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC-----cEEeec---Cc-----cCceeEEEeCCCCCCeEEEEeC-C
Confidence 4789999864444444455 7888876421111 011110 11 14568999999 8888877764 7
Q ss_pred CcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 80 GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 80 ~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+.|.+|++.. ++.+..+... .. ....++++|||+.++++.
T Consensus 285 g~v~~wd~~~---~~~~~~~~~~---------------------------~~----~v~~~~~s~~~~~~l~s~ 324 (416)
T 2pm9_A 285 NTVLLWNPES---AEQLSQFPAR---------------------------GN----WCFKTKFAPEAPDLFACA 324 (416)
T ss_dssp SEEEEECSSS---CCEEEEEECS---------------------------SS----CCCCEEECTTCTTEEEEC
T ss_pred CCEEEeeCCC---CccceeecCC---------------------------CC----ceEEEEECCCCCCEEEEE
Confidence 7899998843 4444333320 11 267899999994444554
No 211
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.23 E-value=0.01 Score=50.35 Aligned_cols=68 Identities=6% Similarity=0.073 Sum_probs=45.9
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|+|+|+++...++ +.+|.+|.....+... +... .+ .....|.+|||+++|.++. .+.|.
T Consensus 218 ~~~~s~~g~~l~sgs~-dg~v~iwd~~~~~~~~--~~~~------~~-------~~v~~v~~sp~~~~la~~~--d~~v~ 279 (343)
T 2xzm_R 218 HLSISPNGKYIATGGK-DKKLLIWDILNLTYPQ--REFD------AG-------STINQIAFNPKLQWVAVGT--DQGVK 279 (343)
T ss_dssp EEEECTTSSEEEEEET-TCEEEEEESSCCSSCS--EEEE------CS-------SCEEEEEECSSSCEEEEEE--SSCEE
T ss_pred EEEECCCCCEEEEEcC-CCeEEEEECCCCcccc--eeec------CC-------CcEEEEEECCCCCEEEEEC--CCCEE
Confidence 3678999998877765 7888888763222111 1111 01 3368999999999997764 66799
Q ss_pred EEEecC
Q 027522 84 QYNIED 89 (222)
Q Consensus 84 vf~i~d 89 (222)
+|++..
T Consensus 280 iw~~~~ 285 (343)
T 2xzm_R 280 IFNLMT 285 (343)
T ss_dssp EEESSS
T ss_pred EEEeCC
Confidence 999854
No 212
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.20 E-value=0.00095 Score=62.30 Aligned_cols=100 Identities=13% Similarity=0.117 Sum_probs=59.6
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeC-C-----
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW-L----- 78 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnR-g----- 78 (222)
..|+|+|+++|.. -+++|.++..+ +|+. ++...-. .... .....+.+||||++|+.+.. .
T Consensus 21 ~~~s~dg~~~~~~--~d~~i~~~~~~-~g~~--~~~~~~~--~~~~-------~~~~~~~~SpDg~~la~~~~~~~~~~~ 86 (719)
T 1z68_A 21 PNWISGQEYLHQS--ADNNIVLYNIE-TGQS--YTILSNR--TMKS-------VNASNYGLSPDRQFVYLESDYSKLWRY 86 (719)
T ss_dssp CEESSSSEEEEEC--TTSCEEEEESS-SCCE--EEEECHH--HHHT-------TTCSEEEECTTSSEEEEEEEEEECSSS
T ss_pred cEECCCCeEEEEc--CCCCEEEEEcC-CCcE--EEEEccc--cccc-------cceeeEEECCCCCeEEEEecCceeEEe
Confidence 5789999655543 47889988764 3432 2222111 0000 11478999999998875543 2
Q ss_pred --CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 79 --HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 79 --h~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
.+.|.+|+++. ++++ .. +.+.+..+.+++||||++|..+.
T Consensus 87 s~~~~i~~~d~~~---g~~~---~~-----------------------------~~l~~~~~~~~~SPDG~~la~~~ 128 (719)
T 1z68_A 87 SYTATYYIYDLSN---GEFV---RG-----------------------------NELPRPIQYLCWSPVGSKLAYVY 128 (719)
T ss_dssp CEEEEEEEEETTT---TEEC---CS-----------------------------SCCCSSBCCEEECSSTTCEEEEE
T ss_pred ecceEEEEEECCC---Cccc---cc-----------------------------eecCcccccceECCCCCEEEEEE
Confidence 46788888743 3331 00 00111267899999999988764
No 213
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.19 E-value=0.021 Score=46.88 Aligned_cols=66 Identities=8% Similarity=0.139 Sum_probs=46.2
Q ss_pred EEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcC---CCCEEEEEeCCCCcE
Q 027522 6 LHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISL---DDRFLYFSNWLHGDI 82 (222)
Q Consensus 6 afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSp---DgrfLYvSnRgh~sI 82 (222)
+|+|+++++++.++ +.+|.+|... .++. ...... . .....|.+|| ++++|+++. ..+.|
T Consensus 175 ~~~~~~~~l~~~~~-d~~i~i~d~~-~~~~--~~~~~~-----~--------~~v~~~~~~~~~~~~~~l~~~~-~dg~i 236 (357)
T 3i2n_A 175 AYNQEERVVCAGYD-NGDIKLFDLR-NMAL--RWETNI-----K--------NGVCSLEFDRKDISMNKLVATS-LEGKF 236 (357)
T ss_dssp CCC-CCCEEEEEET-TSEEEEEETT-TTEE--EEEEEC-----S--------SCEEEEEESCSSSSCCEEEEEE-STTEE
T ss_pred ccCCCCCEEEEEcc-CCeEEEEECc-cCce--eeecCC-----C--------CceEEEEcCCCCCCCCEEEEEC-CCCeE
Confidence 38899999888876 6788888764 3332 111111 1 3468999999 999998876 46789
Q ss_pred EEEEecC
Q 027522 83 RQYNIED 89 (222)
Q Consensus 83 ~vf~i~d 89 (222)
.+|++..
T Consensus 237 ~i~d~~~ 243 (357)
T 3i2n_A 237 HVFDMRT 243 (357)
T ss_dssp EEEEEEE
T ss_pred EEEeCcC
Confidence 9999954
No 214
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.17 E-value=0.0069 Score=57.26 Aligned_cols=59 Identities=10% Similarity=0.153 Sum_probs=39.2
Q ss_pred eeEEEEcCCCCEEE-EEeCC-CC--cEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCC
Q 027522 60 ITDFLISLDDRFLY-FSNWL-HG--DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRG 135 (222)
Q Consensus 60 ~adI~iSpDgrfLY-vSnRg-h~--sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~g 135 (222)
...+.+||||++|. .++++ .+ .|.+++++. ++.+..... +..
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t---g~~~~~~~~----------------------------~~~--- 172 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG---AKELPDVLE----------------------------RVK--- 172 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT---TEEEEEEEE----------------------------EEC---
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC---CCCCccccc----------------------------Ccc---
Confidence 57899999999885 55543 33 788888743 444322111 111
Q ss_pred CCeeEEECCCCCEEEEEe
Q 027522 136 GPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 136 gPr~~~lspdGk~LyvaN 153 (222)
...+++||||++||.+.
T Consensus 173 -~~~~~wspDg~~l~~~~ 189 (710)
T 2xdw_A 173 -FSCMAWTHDGKGMFYNA 189 (710)
T ss_dssp -SCCEEECTTSSEEEEEE
T ss_pred -cceEEEEeCCCEEEEEE
Confidence 35689999999999886
No 215
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.16 E-value=0.0088 Score=59.27 Aligned_cols=83 Identities=11% Similarity=0.081 Sum_probs=51.6
Q ss_pred CceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCC
Q 027522 58 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 137 (222)
Q Consensus 58 ~~~adI~iSpDgrfLYvSnRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggP 137 (222)
+....+.+|||| +|-++. .+++|++|++.. +.++.+..+.+ +. .|. .+..
T Consensus 576 ~~V~svafSpdG-~lAsgs-~D~tv~lwd~~~---~~~~~~~~~~~---------------~~--------~gh--~~~V 625 (902)
T 2oaj_A 576 GKTSAINNSNIG-FVGIAY-AAGSLMLIDRRG---PAIIYMENIRE---------------IS--------GAQ--SACV 625 (902)
T ss_dssp CSEEEEEECBTS-EEEEEE-TTSEEEEEETTT---TEEEEEEEGGG---------------TC--------SSC--CCCE
T ss_pred CcEEEEEecCCc-EEEEEe-CCCcEEEEECCC---CeEEEEeehhH---------------hc--------ccc--ccce
Confidence 457899999999 775554 578999999843 44432211100 00 011 1237
Q ss_pred eeEEEC-----CCC---CEEEEEeCCCCccccccccccccCCcEEEEEEeeCC-CCCe
Q 027522 138 QMIQLS-----LDG---KRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSE-KGGM 186 (222)
Q Consensus 138 r~~~ls-----pdG---k~LyvaNsl~~~wd~Q~yp~~~s~~~~i~~~dvd~~-~G~l 186 (222)
..+++| ||| ++|+++. +..+|..+|+++. +|+.
T Consensus 626 ~sv~Fs~~~~~~Dg~~~~~l~sgs----------------~D~tv~~wd~~p~~~g~~ 667 (902)
T 2oaj_A 626 TCIEFVIMEYGDDGYSSILMVCGT----------------DMGEVITYKILPASGGKF 667 (902)
T ss_dssp EEEEEEEEECTTSSSEEEEEEEEE----------------TTSEEEEEEEEECGGGCE
T ss_pred EEEEEEEEecCCCCCcceEEEEEe----------------cCCcEEEEEEecCCCCcE
Confidence 889999 886 7887775 3466666777554 5654
No 216
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.15 E-value=0.0094 Score=51.50 Aligned_cols=80 Identities=16% Similarity=0.123 Sum_probs=53.5
Q ss_pred EeEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcE
Q 027522 3 IRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDI 82 (222)
Q Consensus 3 vr~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI 82 (222)
+.+.++|+++++++..+ +++|.+|... ++ +..+.+..++ .. .....+.+|||+++|+++.. .+.|
T Consensus 174 ~~~~~~~~~~~l~~~~~-d~~i~iwd~~-~~--~~~~~~~~~~--h~--------~~v~~~~~s~~~~~l~s~~~-dg~i 238 (437)
T 3gre_A 174 MRAFVNEEKSLLVALTN-LSRVIIFDIR-TL--ERLQIIENSP--RH--------GAVSSICIDEECCVLILGTT-RGII 238 (437)
T ss_dssp EEEEECSSCEEEEEEET-TSEEEEEETT-TC--CEEEEEECCG--GG--------CCEEEEEECTTSCEEEEEET-TSCE
T ss_pred EEEEEcCCCCEEEEEeC-CCeEEEEeCC-CC--eeeEEEccCC--CC--------CceEEEEECCCCCEEEEEcC-CCeE
Confidence 34457788888888776 7888888764 23 2233333221 11 34689999999999987775 6789
Q ss_pred EEEEecCCCCCeEEEEEE
Q 027522 83 RQYNIEDPKNPVLTGQIW 100 (222)
Q Consensus 83 ~vf~i~d~~~~~L~~~v~ 100 (222)
.+|++.. ++++..+.
T Consensus 239 ~iwd~~~---~~~~~~~~ 253 (437)
T 3gre_A 239 DIWDIRF---NVLIRSWS 253 (437)
T ss_dssp EEEETTT---TEEEEEEB
T ss_pred EEEEcCC---ccEEEEEe
Confidence 9999843 55544443
No 217
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.13 E-value=0.0061 Score=50.09 Aligned_cols=61 Identities=7% Similarity=-0.038 Sum_probs=44.8
Q ss_pred ceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCe
Q 027522 59 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 138 (222)
Q Consensus 59 ~~adI~iSpDgrfLYvSnRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr 138 (222)
....|.+|||+++|+++. ..+.|.+|++.. ++++..+.. ... ..+
T Consensus 275 ~v~~~~~sp~~~~l~s~~-~dg~i~iwd~~~---~~~~~~~~~---------------------------~~~----~v~ 319 (368)
T 3mmy_A 275 AVNGIAFHPVHGTLATVG-SDGRFSFWDKDA---RTKLKTSEQ---------------------------LDQ----PIS 319 (368)
T ss_dssp CEEEEEECTTTCCEEEEE-TTSCEEEEETTT---TEEEEECCC---------------------------CSS----CEE
T ss_pred ceEEEEEecCCCEEEEEc-cCCeEEEEECCC---CcEEEEecC---------------------------CCC----Cce
Confidence 468999999999997776 468899999843 555332221 011 268
Q ss_pred eEEECCCCCEEEEEeC
Q 027522 139 MIQLSLDGKRLYVTNS 154 (222)
Q Consensus 139 ~~~lspdGk~LyvaNs 154 (222)
.++++|||++|+++.+
T Consensus 320 ~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 320 ACCFNHNGNIFAYASS 335 (368)
T ss_dssp EEEECTTSSCEEEEEC
T ss_pred EEEECCCCCeEEEEec
Confidence 8999999999999864
No 218
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.09 E-value=0.011 Score=47.72 Aligned_cols=96 Identities=10% Similarity=0.093 Sum_probs=60.4
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|+|+++ ++..-.+++|.+|... +++ ....+... . .....|.+||||+++ +.-..+.|.
T Consensus 189 ~~~~~~~~~--~~~~~~dg~i~i~d~~-~~~--~~~~~~~~----~--------~~i~~~~~~~~~~l~--~~~~dg~v~ 249 (313)
T 3odt_A 189 HLAVVDDGH--FISCSNDGLIKLVDMH-TGD--VLRTYEGH----E--------SFVYCIKLLPNGDIV--SCGEDRTVR 249 (313)
T ss_dssp EEEEEETTE--EEEEETTSEEEEEETT-TCC--EEEEEECC----S--------SCEEEEEECTTSCEE--EEETTSEEE
T ss_pred EEEEcCCCe--EEEccCCCeEEEEECC-chh--hhhhhhcC----C--------ceEEEEEEecCCCEE--EEecCCEEE
Confidence 467899988 4455557889888764 232 22322211 1 446899999999633 333578999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++.. ++++..+... ... ...++++|+|+ |+++.
T Consensus 250 iwd~~~---~~~~~~~~~~---------------------------~~~----i~~~~~~~~~~-~~~~~ 284 (313)
T 3odt_A 250 IWSKEN---GSLKQVITLP---------------------------AIS----IWSVDCMSNGD-IIVGS 284 (313)
T ss_dssp EECTTT---CCEEEEEECS---------------------------SSC----EEEEEECTTSC-EEEEE
T ss_pred EEECCC---CceeEEEecc---------------------------Cce----EEEEEEccCCC-EEEEe
Confidence 998843 4454443321 111 57899999999 44555
No 219
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.07 E-value=0.022 Score=48.94 Aligned_cols=100 Identities=11% Similarity=0.106 Sum_probs=62.3
Q ss_pred EEEcC--CCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcE
Q 027522 5 FLHDP--SKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDI 82 (222)
Q Consensus 5 ~afhP--~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI 82 (222)
+.|+| ++++++..++ +.+|.+|... +++. .+..... . .....|.+|||+++|..+. ..+.|
T Consensus 202 ~~~~~~~~g~~l~sgs~-Dg~v~~wd~~-~~~~--~~~~~~h----~--------~~v~~v~~~p~~~~l~s~s-~D~~v 264 (354)
T 2pbi_B 202 LDLAPSETGNTFVSGGC-DKKAMVWDMR-SGQC--VQAFETH----E--------SDVNSVRYYPSGDAFASGS-DDATC 264 (354)
T ss_dssp EEECCCSSCCEEEEEET-TSCEEEEETT-TCCE--EEEECCC----S--------SCEEEEEECTTSSEEEEEE-TTSCE
T ss_pred EEEEeCCCCCEEEEEeC-CCeEEEEECC-CCcE--EEEecCC----C--------CCeEEEEEeCCCCEEEEEe-CCCeE
Confidence 34555 5667766654 7888888764 3332 2222111 1 3468899999999987766 47899
Q ss_pred EEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 83 RQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 83 ~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
++|++.. .+.+..... .....+...++++|+|++|+++.
T Consensus 265 ~lwd~~~---~~~~~~~~~-----------------------------~~~~~~~~~~~~s~~g~~l~~g~ 303 (354)
T 2pbi_B 265 RLYDLRA---DREVAIYSK-----------------------------ESIIFGASSVDFSLSGRLLFAGY 303 (354)
T ss_dssp EEEETTT---TEEEEEECC-----------------------------TTCCSCEEEEEECTTSSEEEEEE
T ss_pred EEEECCC---CcEEEEEcC-----------------------------CCcccceeEEEEeCCCCEEEEEE
Confidence 9999853 222211111 00111256899999999998886
No 220
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.07 E-value=0.02 Score=47.62 Aligned_cols=27 Identities=11% Similarity=-0.139 Sum_probs=20.0
Q ss_pred eEEEEcCCCCEEEEEeCCCC------cEEEEEec
Q 027522 61 TDFLISLDDRFLYFSNWLHG------DIRQYNIE 88 (222)
Q Consensus 61 adI~iSpDgrfLYvSnRgh~------sI~vf~i~ 88 (222)
..+.+|||| .+|++++..+ ...+|.++
T Consensus 174 ~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d 206 (347)
T 2gop_A 174 SSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE 206 (347)
T ss_dssp CEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE
T ss_pred ccccCCCCe-EEEEEecccccccccccccEEEeC
Confidence 678899999 9998887532 45666664
No 221
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.04 E-value=0.032 Score=47.21 Aligned_cols=72 Identities=7% Similarity=0.043 Sum_probs=49.8
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCC-CeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDG-SWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDI 82 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g-~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI 82 (222)
-++|+|+++++..... +.+|.+|..+..+ .++..+++. .. . .....|..|||+++|..+. ..+.|
T Consensus 112 ~v~~sp~g~~las~s~-D~~v~iwd~~~~~~~~~~~~~~~---~h-~--------~~v~~v~~~p~~~~l~s~s-~D~~i 177 (330)
T 2hes_X 112 GVAWSNDGYYLATCSR-DKSVWIWETDESGEEYECISVLQ---EH-S--------QDVKHVIWHPSEALLASSS-YDDTV 177 (330)
T ss_dssp EEEECTTSCEEEEEET-TSCEEEEECCTTCCCCEEEEEEC---CC-S--------SCEEEEEECSSSSEEEEEE-TTSCE
T ss_pred EEEECCCCCEEEEEeC-CCEEEEEeccCCCCCeEEEEEec---cC-C--------CceEEEEECCCCCEEEEEc-CCCeE
Confidence 3689999998877765 8889999874222 333333221 11 1 3468999999999987666 47899
Q ss_pred EEEEecC
Q 027522 83 RQYNIED 89 (222)
Q Consensus 83 ~vf~i~d 89 (222)
++|++..
T Consensus 178 ~iW~~~~ 184 (330)
T 2hes_X 178 RIWKDYD 184 (330)
T ss_dssp EEEEEET
T ss_pred EEEECCC
Confidence 9999853
No 222
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.04 E-value=0.018 Score=49.50 Aligned_cols=72 Identities=14% Similarity=0.035 Sum_probs=49.9
Q ss_pred eEEEcCCCCeEEEEeccCce-EEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcE
Q 027522 4 RFLHDPSKDIGFVGCALAST-MVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDI 82 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsst-V~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI 82 (222)
.++|+|+|+++...++ +.+ |.+|... +++. ...+.. .... .....+.+||||++|..+.. ++.|
T Consensus 200 ~~~~s~~g~~l~s~s~-d~~~v~iwd~~-~~~~--~~~~~~--g~h~--------~~v~~~~~s~~~~~l~s~s~-d~~v 264 (355)
T 3vu4_A 200 MVRLNRKSDMVATCSQ-DGTIIRVFKTE-DGVL--VREFRR--GLDR--------ADVVDMKWSTDGSKLAVVSD-KWTL 264 (355)
T ss_dssp EEEECTTSSEEEEEET-TCSEEEEEETT-TCCE--EEEEEC--TTCC--------SCEEEEEECTTSCEEEEEET-TCEE
T ss_pred EEEECCCCCEEEEEeC-CCCEEEEEECC-CCcE--EEEEEc--CCCC--------CcEEEEEECCCCCEEEEEEC-CCEE
Confidence 4689999998888776 677 8888763 3432 222221 0011 44689999999999987764 6899
Q ss_pred EEEEecCC
Q 027522 83 RQYNIEDP 90 (222)
Q Consensus 83 ~vf~i~d~ 90 (222)
.+|++..+
T Consensus 265 ~iw~~~~~ 272 (355)
T 3vu4_A 265 HVFEIFND 272 (355)
T ss_dssp EEEESSCC
T ss_pred EEEEccCC
Confidence 99999653
No 223
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.03 E-value=0.041 Score=46.56 Aligned_cols=100 Identities=10% Similarity=0.158 Sum_probs=61.9
Q ss_pred cC-CCCeEEEEeccCceEEEEEeCCCCC--eeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 8 DP-SKDIGFVGCALASTMVRFSKTQDGS--WNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 8 hP-~g~~aYvv~ELsstV~~~~~d~~g~--~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
+| +++++..... +.+|.+|....... ..... ...+ .+.. ....+|.+|||+++|..+. ..+.|++
T Consensus 35 ~~~d~~~l~sgs~-D~~v~iWd~~~~~~~~~~~~~-~~~l----~~h~-----~~V~~~~~~~~~~~l~s~s-~D~~v~l 102 (343)
T 2xzm_R 35 ENEDSPVLISGSR-DKTVMIWKLYEEEQNGYFGIP-HKAL----TGHN-----HFVSDLALSQENCFAISSS-WDKTLRL 102 (343)
T ss_dssp TTCCCCEEEEEET-TSCEEEEEECSSCCSSBSEEE-EEEE----CCCS-----SCEEEEEECSSTTEEEEEE-TTSEEEE
T ss_pred cCCCCCEEEEEcC-CCEEEEEECCcCCcccccccc-cchh----ccCC-----CceEEEEECCCCCEEEEEc-CCCcEEE
Confidence 55 7777776665 78888887642110 11111 1111 1211 3468999999999997665 4789999
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
|++.. ++.+..+.. .. +..+.++++|||++|+.+.
T Consensus 103 wd~~~---~~~~~~~~~-----------------------------h~--~~v~~v~~sp~~~~l~s~~ 137 (343)
T 2xzm_R 103 WDLRT---GTTYKRFVG-----------------------------HQ--SEVYSVAFSPDNRQILSAG 137 (343)
T ss_dssp EETTS---SCEEEEEEC-----------------------------CC--SCEEEEEECSSTTEEEEEE
T ss_pred EECCC---CcEEEEEcC-----------------------------CC--CcEEEEEECCCCCEEEEEc
Confidence 99853 334332221 00 1157899999999998875
No 224
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.02 E-value=0.013 Score=48.12 Aligned_cols=112 Identities=13% Similarity=0.020 Sum_probs=64.1
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcC-CCCEEEEEeCCCCcE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISL-DDRFLYFSNWLHGDI 82 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSp-DgrfLYvSnRgh~sI 82 (222)
-++|+|++ .+++-.+.+|.+|.....+...... .... . ......|.++| |+++|+++.. .+.|
T Consensus 155 ~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~---~--------~~~i~~i~~~~~~~~~l~~~~~-dg~i 218 (342)
T 1yfq_A 155 TMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNGTI-EESG---L--------KYQIRDVALLPKEQEGYACSSI-DGRV 218 (342)
T ss_dssp EEEECSSE---EEEEESTTEEEEEESSCCTTCCCEE-EECS---C--------SSCEEEEEECSGGGCEEEEEET-TSEE
T ss_pred EEEecCCc---EEEEeCCCeEEEEECCcccccccee-eecC---C--------CCceeEEEECCCCCCEEEEEec-CCcE
Confidence 36788887 4444457788888764313221111 1111 0 13468999999 9999988775 7899
Q ss_pred EEEEecCCC-C--CeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 83 RQYNIEDPK-N--PVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 83 ~vf~i~d~~-~--~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
.+|+++... + .+....+.... .. ..|..-.+....++++|+|++|+++.
T Consensus 219 ~i~~~~~~~~~~~~~~~~~~~~~~--------------------~~--~~~~~~~~~i~~~~~s~~~~~l~~~~ 270 (342)
T 1yfq_A 219 AVEFFDDQGDDYNSSKRFAFRCHR--------------------LN--LKDTNLAYPVNSIEFSPRHKFLYTAG 270 (342)
T ss_dssp EEEECCTTCCSTTCTTCEEEECCC--------------------CC--TTCCSSCCCEEEEEECTTTCCEEEEE
T ss_pred EEEEEcCCCcccccccceeeeccc--------------------cc--ccccccceeEEEEEEcCCCCEEEEec
Confidence 999995430 0 12211122100 00 00111122367899999999998887
No 225
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.01 E-value=0.0027 Score=59.25 Aligned_cols=67 Identities=12% Similarity=0.172 Sum_probs=43.0
Q ss_pred eEEEcCCCCeEEEEecc--------CceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEE
Q 027522 4 RFLHDPSKDIGFVGCAL--------ASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFS 75 (222)
Q Consensus 4 r~afhP~g~~aYvv~EL--------sstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvS 75 (222)
.++|+|||+++.....- ..+|.++..+ +|+. +.+.... .....+.+||||++|..+
T Consensus 64 ~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~-~g~~-------~~~~~l~--------~~~~~~~~SPDG~~la~~ 127 (719)
T 1z68_A 64 NYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS-NGEF-------VRGNELP--------RPIQYLCWSPVGSKLAYV 127 (719)
T ss_dssp EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT-TTEE-------CCSSCCC--------SSBCCEEECSSTTCEEEE
T ss_pred eEEECCCCCeEEEEecCceeEEeecceEEEEEECC-CCcc-------ccceecC--------cccccceECCCCCEEEEE
Confidence 47899999987766552 3567777653 3422 0001111 224779999999988776
Q ss_pred eCCCCcEEEEEec
Q 027522 76 NWLHGDIRQYNIE 88 (222)
Q Consensus 76 nRgh~sI~vf~i~ 88 (222)
. .+.|.+|++.
T Consensus 128 ~--~~~i~~~~~~ 138 (719)
T 1z68_A 128 Y--QNNIYLKQRP 138 (719)
T ss_dssp E--TTEEEEESST
T ss_pred E--CCeEEEEeCC
Confidence 4 4689999774
No 226
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.96 E-value=0.026 Score=47.76 Aligned_cols=69 Identities=9% Similarity=0.023 Sum_probs=45.8
Q ss_pred eEEEcC-CCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcE
Q 027522 4 RFLHDP-SKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDI 82 (222)
Q Consensus 4 r~afhP-~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI 82 (222)
-++|+| +++++++.++ +.+|.+|... + ...+.+.... .. ......+.+|||+++|+++.. .+.|
T Consensus 123 ~~~~~~~~~~~l~s~~~-d~~i~iwd~~--~--~~~~~~~~~~-~~--------~~~v~~~~~~~~~~~l~~~~~-d~~i 187 (383)
T 3ei3_B 123 GMKFNQFNTNQLFVSSI-RGATTLRDFS--G--SVIQVFAKTD-SW--------DYWYCCVDVSVSRQMLATGDS-TGRL 187 (383)
T ss_dssp EEEEETTEEEEEEEEET-TTEEEEEETT--S--CEEEEEECCC-CS--------SCCEEEEEEETTTTEEEEEET-TSEE
T ss_pred EEEeCCCCCCEEEEEeC-CCEEEEEECC--C--CceEEEeccC-CC--------CCCeEEEEECCCCCEEEEECC-CCCE
Confidence 367899 5666666654 7888888764 2 1122222111 11 144689999999999987775 5799
Q ss_pred EEEEe
Q 027522 83 RQYNI 87 (222)
Q Consensus 83 ~vf~i 87 (222)
.+|++
T Consensus 188 ~i~d~ 192 (383)
T 3ei3_B 188 LLLGL 192 (383)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99998
No 227
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.96 E-value=0.0068 Score=56.62 Aligned_cols=141 Identities=13% Similarity=0.081 Sum_probs=77.0
Q ss_pred eEEEcCCCC-eEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCC---CCEEEEEeCC-
Q 027522 4 RFLHDPSKD-IGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLD---DRFLYFSNWL- 78 (222)
Q Consensus 4 r~afhP~g~-~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpD---grfLYvSnRg- 78 (222)
=++|.|+|. .+|| .|....|.++.. +|......+..++..-..+. ........-+|+++|| .++|||+..-
T Consensus 18 ~~a~~pdG~~rl~V-~er~G~i~~~~~--~g~~~~~~~~~~~~~~~~g~-~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 18 GALHSGDGSQRLFI-LEKEGYVKILTP--EGEIFKEPYLDIHKLVQSGI-KGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp EEECCSSSSCCEEE-EETTTEEEEECT--TSCBCSSCSEECTTTBCCCC-SSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred EEEECCCCCeEEEE-EeCCceEEEEeC--CCCeeeeeecCCcceeccCc-cccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 478999997 6776 477889988843 34321112223332111110 0000134578999998 7899998642
Q ss_pred -----------CCcEEEEEecCCC-------CCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeE
Q 027522 79 -----------HGDIRQYNIEDPK-------NPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMI 140 (222)
Q Consensus 79 -----------h~sI~vf~i~d~~-------~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~ 140 (222)
.+.|+.|.+++.. +.+.+-++.. . .+.| .-..|
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~----------------------~----~~~H---~g~~l 144 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAE----------------------L----HRKH---LGGQL 144 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEE----------------------S----SSSS---CEEEE
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCC----------------------C----CCcc---cCCcE
Confidence 1367788885421 1122111111 0 1222 25679
Q ss_pred EECCCCCEEEEEeCCCCc-----cccccccccccCCcEEEEEEeeC
Q 027522 141 QLSLDGKRLYVTNSLFSA-----WDCQFYPELKEKGSHMLQIDVNS 181 (222)
Q Consensus 141 ~lspdGk~LyvaNsl~~~-----wd~Q~yp~~~s~~~~i~~~dvd~ 181 (222)
+++||| +|||+.-=-.. -+.| ++.+....|+|+|.|.
T Consensus 145 ~fgpDG-~LYv~~Gd~~~~~~~~~~~q---~~~~~~GkIlRi~~dg 186 (463)
T 2wg3_C 145 LFGPDG-FLYIILGDGMITLDDMEEMD---GLSDFTGSVLRLDVDT 186 (463)
T ss_dssp EECTTS-CEEEEECCTTCCHHHHHHCT---TCCSCTTEEEEEBCCC
T ss_pred eECCCC-cEEEEeCCCCCCCCcccccc---CcCCCCeeEEEEECCC
Confidence 999999 59998531111 1122 1224468899998875
No 228
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.95 E-value=0.035 Score=52.45 Aligned_cols=57 Identities=7% Similarity=0.091 Sum_probs=35.4
Q ss_pred EEEcCCCCe-EEEEeccCc---eEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeC
Q 027522 5 FLHDPSKDI-GFVGCALAS---TMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW 77 (222)
Q Consensus 5 ~afhP~g~~-aYvv~ELss---tV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnR 77 (222)
++|+|||++ ||...+-++ +|.++..+ +|+.... .+.. .....+..||||+.||.+..
T Consensus 130 ~~~SPDg~~la~~~~~~G~~~~~i~v~d~~-tg~~~~~---~~~~------------~~~~~~~wspDg~~l~~~~~ 190 (710)
T 2xdw_A 130 YAFSEDGEYFAYGLSASGSDWVTIKFMKVD-GAKELPD---VLER------------VKFSCMAWTHDGKGMFYNAY 190 (710)
T ss_dssp EEECTTSSEEEEEEEETTCSCEEEEEEETT-TTEEEEE---EEEE------------ECSCCEEECTTSSEEEEEEC
T ss_pred EEECCCCCEEEEEEcCCCCceEEEEEEECC-CCCCCcc---cccC------------cccceEEEEeCCCEEEEEEE
Confidence 689999985 466666555 67777653 4543221 1111 11257899999998877654
No 229
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.94 E-value=0.014 Score=51.16 Aligned_cols=98 Identities=10% Similarity=0.029 Sum_probs=64.3
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++|+|+++++.+.+. +.+|.+|... .+. . +... .+. ......+.++|||++|+.+. .++.|.+
T Consensus 156 v~~~~~~~~l~sgs~-D~~i~iwd~~-~~~--~---~~~~----~~h-----~~~V~~v~~~p~~~~l~s~s-~D~~i~~ 218 (410)
T 1vyh_C 156 ISFDHSGKLLASCSA-DMTIKLWDFQ-GFE--C---IRTM----HGH-----DHNVSSVSIMPNGDHIVSAS-RDKTIKM 218 (410)
T ss_dssp EEECTTSSEEEEEET-TSCCCEEETT-SSC--E---EECC----CCC-----SSCEEEEEECSSSSEEEEEE-TTSEEEE
T ss_pred EEEcCCCCEEEEEeC-CCeEEEEeCC-CCc--e---eEEE----cCC-----CCCEEEEEEeCCCCEEEEEe-CCCeEEE
Confidence 678999997766654 7888888663 222 1 1122 111 13468999999999997666 4789999
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
|++.. ++.+..+.. . .. .-+.++++|||++|+.+.
T Consensus 219 wd~~~---~~~~~~~~~--h-------------------------~~----~v~~~~~~~~g~~l~s~s 253 (410)
T 1vyh_C 219 WEVQT---GYCVKTFTG--H-------------------------RE----WVRMVRPNQDGTLIASCS 253 (410)
T ss_dssp EETTT---CCEEEEEEC--C-------------------------SS----CEEEEEECTTSSEEEEEE
T ss_pred EECCC---CcEEEEEeC--C-------------------------Cc----cEEEEEECCCCCEEEEEc
Confidence 99853 333322221 0 11 257899999999888775
No 230
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=96.91 E-value=0.0074 Score=55.05 Aligned_cols=70 Identities=7% Similarity=-0.025 Sum_probs=45.4
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeC--CCCc
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW--LHGD 81 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnR--gh~s 81 (222)
-++|+|||+++..+..-+.++-+|..+ .|.. .+ +.... . .....+..||| |.||++.+ +.+.
T Consensus 26 ~~~~~~DG~~la~~s~~~g~~~lw~~~-~g~~--~~---lt~~~-~--------~~~~~~~~spd-~~l~~~~~~~g~~~ 89 (582)
T 3o4h_A 26 SLQGVVDGDKLLVVGFSEGSVNAYLYD-GGET--VK---LNREP-I--------NSVLDPHYGVG-RVILVRDVSKGAEQ 89 (582)
T ss_dssp EEEEEETTTEEEEEEEETTEEEEEEEE-TTEE--EE---CCSSC-C--------SEECEECTTCS-EEEEEEECSTTSCC
T ss_pred eeecCCCCCeEEEEEccCCceeEEEEc-CCCc--Ee---eeccc-c--------cccccccCCCC-eEEEEeccCCCCcc
Confidence 357999998877776656776666553 2321 11 22111 0 23467889999 99999987 5666
Q ss_pred EEEEEecC
Q 027522 82 IRQYNIED 89 (222)
Q Consensus 82 I~vf~i~d 89 (222)
+.+|.++.
T Consensus 90 ~~l~~~~~ 97 (582)
T 3o4h_A 90 HALFKVNT 97 (582)
T ss_dssp EEEEEEET
T ss_pred eEEEEEec
Confidence 78888753
No 231
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.86 E-value=0.048 Score=47.02 Aligned_cols=108 Identities=12% Similarity=0.029 Sum_probs=66.8
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeC--CCCCeeEE------EEEEecCcccccccCCCCCCceeEEE--EcCCCCEEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKT--QDGSWNHE------VAISVKSLKVQNWILPEMPGLITDFL--ISLDDRFLY 73 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d--~~g~~~~~------q~is~~p~~~~g~~~~~~~~~~adI~--iSpDgrfLY 73 (222)
-++|+|+++++++..+ +.+|.+|..+ ..|+.... ..+.+.|.... .....+. .++|+++|+
T Consensus 116 ~~~~~~~~~~l~s~s~-dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~ 186 (437)
T 3gre_A 116 QITMIPNFDAFAVSSK-DGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKN--------EYAVRMRAFVNEEKSLLV 186 (437)
T ss_dssp EEEECTTSSEEEEEET-TSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSC--------CCEEEEEEEECSSCEEEE
T ss_pred EEEEeCCCCEEEEEeC-CCEEEEEEeccccCCceeeccccceeEEEEccCcccc--------cCceEEEEEEcCCCCEEE
Confidence 3789999998887776 7888888653 23332221 11222221111 2334444 889999998
Q ss_pred EEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 74 FSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 74 vSnRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
++.. .+.|.+|++.. ++.+..+..- .-.+..+.++++|+|++|+++.
T Consensus 187 ~~~~-d~~i~iwd~~~---~~~~~~~~~~-----------------------------~h~~~v~~~~~s~~~~~l~s~~ 233 (437)
T 3gre_A 187 ALTN-LSRVIIFDIRT---LERLQIIENS-----------------------------PRHGAVSSICIDEECCVLILGT 233 (437)
T ss_dssp EEET-TSEEEEEETTT---CCEEEEEECC-----------------------------GGGCCEEEEEECTTSCEEEEEE
T ss_pred EEeC-CCeEEEEeCCC---CeeeEEEccC-----------------------------CCCCceEEEEECCCCCEEEEEc
Confidence 7775 67999999843 4443333320 0011268899999999999886
No 232
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.82 E-value=0.026 Score=53.65 Aligned_cols=31 Identities=10% Similarity=0.173 Sum_probs=23.0
Q ss_pred CceeEEEEcCCCC-EEEEEeCCCC--cEEEEEec
Q 027522 58 GLITDFLISLDDR-FLYFSNWLHG--DIRQYNIE 88 (222)
Q Consensus 58 ~~~adI~iSpDgr-fLYvSnRgh~--sI~vf~i~ 88 (222)
.....+..||||+ .++.+||..+ .|.+++++
T Consensus 260 ~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~ 293 (740)
T 4a5s_A 260 HYLCDVTWATQERISLQWLRRIQNYSVMDICDYD 293 (740)
T ss_dssp EEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEE
T ss_pred eEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECC
Confidence 3467889999999 5567888765 46677764
No 233
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.82 E-value=0.046 Score=46.93 Aligned_cols=63 Identities=22% Similarity=0.236 Sum_probs=44.7
Q ss_pred CceeEEEEcCCCCEEEEEeCCCCc-EEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCC
Q 027522 58 GLITDFLISLDDRFLYFSNWLHGD-IRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG 136 (222)
Q Consensus 58 ~~~adI~iSpDgrfLYvSnRgh~s-I~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~gg 136 (222)
.....|.+||||++|..+.. +++ |.+|++.. ++.+..+..|.. . +.
T Consensus 196 ~~v~~~~~s~~g~~l~s~s~-d~~~v~iwd~~~---~~~~~~~~~g~h-------------------------~----~~ 242 (355)
T 3vu4_A 196 NPIKMVRLNRKSDMVATCSQ-DGTIIRVFKTED---GVLVREFRRGLD-------------------------R----AD 242 (355)
T ss_dssp SCEEEEEECTTSSEEEEEET-TCSEEEEEETTT---CCEEEEEECTTC-------------------------C----SC
T ss_pred CceEEEEECCCCCEEEEEeC-CCCEEEEEECCC---CcEEEEEEcCCC-------------------------C----Cc
Confidence 45789999999999976664 677 99999853 445444332100 0 12
Q ss_pred CeeEEECCCCCEEEEEe
Q 027522 137 PQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 137 Pr~~~lspdGk~LyvaN 153 (222)
-+.+++||||++|+.+.
T Consensus 243 v~~~~~s~~~~~l~s~s 259 (355)
T 3vu4_A 243 VVDMKWSTDGSKLAVVS 259 (355)
T ss_dssp EEEEEECTTSCEEEEEE
T ss_pred EEEEEECCCCCEEEEEE
Confidence 57899999999998886
No 234
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.80 E-value=0.021 Score=56.43 Aligned_cols=76 Identities=12% Similarity=0.076 Sum_probs=52.7
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
-++|+|+|+++.+.++ +++|.+|... +++ ....+. . .. .....|.+||||++|.++. .++.|.
T Consensus 620 ~~~~s~~~~~l~s~~~-d~~i~vw~~~-~~~--~~~~~~---~-h~--------~~v~~~~~s~~~~~l~s~~-~d~~v~ 682 (1249)
T 3sfz_A 620 HACFSQDGQRIASCGA-DKTLQVFKAE-TGE--KLLDIK---A-HE--------DEVLCCAFSSDDSYIATCS-ADKKVK 682 (1249)
T ss_dssp EEEECTTSSEEEEEET-TSCEEEEETT-TCC--EEEEEC---C-CS--------SCEEEEEECTTSSEEEEEE-TTSEEE
T ss_pred EEEECCCCCEEEEEeC-CCeEEEEECC-CCC--EEEEec---c-CC--------CCEEEEEEecCCCEEEEEe-CCCeEE
Confidence 3689999999988775 7789988764 332 222221 1 11 4468999999999998776 477899
Q ss_pred EEEecCCCCCeEEEEE
Q 027522 84 QYNIEDPKNPVLTGQI 99 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v 99 (222)
+|++.. ++++...
T Consensus 683 vwd~~~---~~~~~~~ 695 (1249)
T 3sfz_A 683 IWDSAT---GKLVHTY 695 (1249)
T ss_dssp EEETTT---CCEEEEE
T ss_pred EEECCC---CceEEEE
Confidence 999853 4554433
No 235
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.80 E-value=0.081 Score=44.06 Aligned_cols=79 Identities=8% Similarity=0.089 Sum_probs=50.4
Q ss_pred eEEEcC-CCCeEEEEeccCceEEEEEeCCCC---CeeEEEEEEecCcccccccCCCCCCceeEEEEcC-CCCEEEEEeCC
Q 027522 4 RFLHDP-SKDIGFVGCALASTMVRFSKTQDG---SWNHEVAISVKSLKVQNWILPEMPGLITDFLISL-DDRFLYFSNWL 78 (222)
Q Consensus 4 r~afhP-~g~~aYvv~ELsstV~~~~~d~~g---~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSp-DgrfLYvSnRg 78 (222)
-++|+| +++++++.++ +++|.+|..+... .+..............+. ......|.++| ++++|+++. .
T Consensus 48 ~~~~s~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~l~s~~-~ 120 (408)
T 4a11_B 48 TLDIEPVEGRYMLSGGS-DGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVH-----RYSVETVQWYPHDTGMFTSSS-F 120 (408)
T ss_dssp EEEECTTTCCEEEEEET-TSCEEEEECCCCSSSSCEEECEEEEECTTCTTCC-----SSCEEEEEECTTCTTCEEEEE-T
T ss_pred EEEEecCCCCEEEEEcC-CCeEEEEECCCCcccceEeccccccccccccccC-----CCcEEEEEEccCCCcEEEEEe-C
Confidence 478999 9999988876 7889999875221 222222223222111111 25578999999 666665554 5
Q ss_pred CCcEEEEEecC
Q 027522 79 HGDIRQYNIED 89 (222)
Q Consensus 79 h~sI~vf~i~d 89 (222)
.+.|.+|++..
T Consensus 121 d~~i~iwd~~~ 131 (408)
T 4a11_B 121 DKTLKVWDTNT 131 (408)
T ss_dssp TSEEEEEETTT
T ss_pred CCeEEEeeCCC
Confidence 78999999853
No 236
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.78 E-value=0.032 Score=51.54 Aligned_cols=121 Identities=9% Similarity=0.201 Sum_probs=63.6
Q ss_pred CceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCc-cccCcccCCC
Q 027522 58 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVP-EVQGHRLRGG 136 (222)
Q Consensus 58 ~~~adI~iSpDgrfLYvSnRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~-~v~G~~~~gg 136 (222)
..+..|.+.|||| |||+.|..+.|.+++ + ..++.. .+.. + |+.. ...| .+|
T Consensus 27 ~~P~~~a~~pdG~-l~V~e~~gg~I~~~~--~-~~g~~~-~~~~---~-----------------~~~~~~~~g---~~G 78 (454)
T 1cru_A 27 NKPHALLWGPDNQ-IWLTERATGKILRVN--P-ESGSVK-TVFQ---V-----------------PEIVNDADG---QNG 78 (454)
T ss_dssp SSEEEEEECTTSC-EEEEETTTCEEEEEC--T-TTCCEE-EEEE---C-----------------TTCCCCTTS---SCS
T ss_pred CCceEEEEcCCCc-EEEEEcCCCEEEEEE--C-CCCcEe-EEec---C-----------------CccccccCC---CCc
Confidence 3468999999999 778888666666553 2 223321 1111 0 0000 0012 236
Q ss_pred CeeEEECCC---CCEEEEEeCCCCccccccccccccCCcEEEEEEeeCCCCCeeeccceeEecCCCCCCCcceeeeec
Q 027522 137 PQMIQLSLD---GKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRY 211 (222)
Q Consensus 137 Pr~~~lspd---Gk~LyvaNsl~~~wd~Q~yp~~~s~~~~i~~~dvd~~~G~l~~~~~f~vdf~~~~~g~~~~h~~r~ 211 (222)
+-.|+++|| +.+|||+++-... .... ........|.|++.+..++.+.-.+.++-++..... --+|.|.|
T Consensus 79 llgia~~Pdf~~~g~lYv~~s~~~~-~~~~--~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~--H~~~~l~f 151 (454)
T 1cru_A 79 LLGFAFHPDFKNNPYIYISGTFKNP-KSTD--KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKD--HQSGRLVI 151 (454)
T ss_dssp EEEEEECTTTTTSCEEEEEEEEECT-TC----CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSS--CCEEEEEE
T ss_pred eeEEEECCCcCcCCEEEEEEecccc-CCCc--cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCC--CCCCeEeE
Confidence 778999998 9999999841000 0000 000013578888887666666422222223433211 24677777
No 237
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.78 E-value=0.0019 Score=63.34 Aligned_cols=114 Identities=15% Similarity=0.141 Sum_probs=73.4
Q ss_pred EcCCCCeEEEEecc----------Cce----EEEEEeC------CCCCeeEEE-----EEEecCcccccc---cCCCCCC
Q 027522 7 HDPSKDIGFVGCAL----------AST----MVRFSKT------QDGSWNHEV-----AISVKSLKVQNW---ILPEMPG 58 (222)
Q Consensus 7 fhP~g~~aYvv~EL----------sst----V~~~~~d------~~g~~~~~q-----~is~~p~~~~g~---~~~~~~~ 58 (222)
-.++|+|+|..|.= +++ |.+|.+. ++|+++... ++..-.....+. -+-+.|+
T Consensus 244 ~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~~~~~~~~~~iP~pk 323 (638)
T 3sbq_A 244 ADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKDGKDSKFTRYVPVPK 323 (638)
T ss_dssp ECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBTTBCCSSEEEEEESS
T ss_pred CCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEccccccccCCceEEEEeCCC
Confidence 47889999998862 111 6667652 146655433 333221000010 0113568
Q ss_pred ceeEEEEcCCCCEEEEEeCCCCcEEEEEecCC-----C-----CCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccc
Q 027522 59 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDP-----K-----NPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEV 128 (222)
Q Consensus 59 ~~adI~iSpDgrfLYvSnRgh~sI~vf~i~d~-----~-----~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v 128 (222)
.+-.|.+||||||+|+++-+...+.||+++.- + +-.+++++.+
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~--------------------------- 376 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL--------------------------- 376 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC---------------------------
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC---------------------------
Confidence 88999999999999999999999999999620 0 0122333333
Q ss_pred cCcccCCCCeeEEECCCCCEEEEEe
Q 027522 129 QGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 129 ~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
|.- |++.+++++| ..|.+-
T Consensus 377 -GlG----PlHt~Fd~~G-~aYTtl 395 (638)
T 3sbq_A 377 -GLG----PLHTTFDGRG-NAYTTL 395 (638)
T ss_dssp -CSC----EEEEEECSSS-EEEEEE
T ss_pred -CCc----ccEEEECCCC-ceEeee
Confidence 554 9999999999 788875
No 238
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.77 E-value=0.071 Score=45.12 Aligned_cols=116 Identities=13% Similarity=0.164 Sum_probs=65.3
Q ss_pred EEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEE
Q 027522 6 LHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQY 85 (222)
Q Consensus 6 afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~vf 85 (222)
.+.|+|+.+++.+.-...|..+ +.+|++... +.+.. ...+. +..+..+.+++||++|++ ....+.|..|
T Consensus 83 ~~~~dG~~lv~~~~~~~~v~~v--d~~Gk~l~~--~~~~~-~~~~~-----~~~~~~v~~~~~G~~lv~-~~~~~~v~~~ 151 (276)
T 3no2_A 83 RILPDGNALVAWCGHPSTILEV--NMKGEVLSK--TEFET-GIERP-----HAQFRQINKNKKGNYLVP-LFATSEVREI 151 (276)
T ss_dssp EECTTSCEEEEEESTTEEEEEE--CTTSCEEEE--EEECC-SCSSG-----GGSCSCCEECTTSCEEEE-ETTTTEEEEE
T ss_pred EECCCCCEEEEecCCCCEEEEE--eCCCCEEEE--EeccC-CCCcc-----cccccCceECCCCCEEEE-ecCCCEEEEE
Confidence 4667888777765544556555 445654322 22221 11110 012345678999998865 4466777777
Q ss_pred EecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEeCCCCcccccccc
Q 027522 86 NIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYP 165 (222)
Q Consensus 86 ~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaNsl~~~wd~Q~yp 165 (222)
+ +. ++++-+...+ . .|......++|+.|+++.
T Consensus 152 d---~~-G~~~w~~~~~----------------------------~----~~~~~~~~~~g~~~v~~~------------ 183 (276)
T 3no2_A 152 A---PN-GQLLNSVKLS----------------------------G----TPFSSAFLDNGDCLVACG------------ 183 (276)
T ss_dssp C---TT-SCEEEEEECS----------------------------S----CCCEEEECTTSCEEEECB------------
T ss_pred C---CC-CCEEEEEECC----------------------------C----CccceeEcCCCCEEEEeC------------
Confidence 4 33 6664333321 1 277778888888664443
Q ss_pred ccccCCcEEEEEEeeCCCCCe
Q 027522 166 ELKEKGSHMLQIDVNSEKGGM 186 (222)
Q Consensus 166 ~~~s~~~~i~~~dvd~~~G~l 186 (222)
++..++.+ |++||++
T Consensus 184 ----~~~~v~~~--d~~tG~~ 198 (276)
T 3no2_A 184 ----DAHCFVQL--NLESNRI 198 (276)
T ss_dssp ----TTSEEEEE--CTTTCCE
T ss_pred ----CCCeEEEE--eCcCCcE
Confidence 34566666 5677776
No 239
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.77 E-value=0.072 Score=42.72 Aligned_cols=71 Identities=15% Similarity=0.206 Sum_probs=43.3
Q ss_pred eEEEcCC---CCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCC----CEEEEEe
Q 027522 4 RFLHDPS---KDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDD----RFLYFSN 76 (222)
Q Consensus 4 r~afhP~---g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDg----rfLYvSn 76 (222)
.++|+|+ ++.+.+... +..+ ++.....+.+..... +. .. . .....|.+|||+ ++|+++.
T Consensus 172 ~~~~~p~~~~~~~l~~~~~-~~~~-~~~~~~~~~~~~~~~--~~-~h-~--------~~i~~~~~~p~~~~~~~~l~s~~ 237 (351)
T 3f3f_A 172 CLSWCPSRFSPEKLAVSAL-EQAI-IYQRGKDGKLHVAAK--LP-GH-K--------SLIRSISWAPSIGRWYQLIATGC 237 (351)
T ss_dssp EEEECCCSSSCCEEEEEET-TEEE-EEEECTTSCEEEEEE--CC-CC-C--------SCEEEEEECCCSSCSSEEEEEEE
T ss_pred EEEeccCCCCCcEEEEecC-CCcE-EEEccCCCceeeeee--cC-CC-C--------cceeEEEECCCCCCcceEEEEEc
Confidence 4678887 666655554 5555 333333454433222 11 11 1 446899999998 5665554
Q ss_pred CCCCcEEEEEecC
Q 027522 77 WLHGDIRQYNIED 89 (222)
Q Consensus 77 Rgh~sI~vf~i~d 89 (222)
..+.|.+|++..
T Consensus 238 -~dg~i~iwd~~~ 249 (351)
T 3f3f_A 238 -KDGRIRIFKITE 249 (351)
T ss_dssp -TTSCEEEEEEEE
T ss_pred -CCCeEEEEeCCC
Confidence 678999999964
No 240
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.76 E-value=0.033 Score=52.08 Aligned_cols=104 Identities=15% Similarity=0.291 Sum_probs=66.1
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCC-eeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGS-WNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDI 82 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~-~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI 82 (222)
.++|+|++....+.+--+.+|.+|..+.... +...+. .+ .+.. .....+.+||||++|..+.+ ++.|
T Consensus 387 ~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~-~~-----~~h~-----~~v~~v~~s~~g~~l~sgs~-Dg~v 454 (694)
T 3dm0_A 387 AIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQR-RL-----TGHS-----HFVEDVVLSSDGQFALSGSW-DGEL 454 (694)
T ss_dssp EEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEE-EE-----ECCS-----SCEEEEEECTTSSEEEEEET-TSEE
T ss_pred EEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccc-ee-----cCCC-----CcEEEEEECCCCCEEEEEeC-CCcE
Confidence 3578888766666666689999998753222 111111 11 1110 34689999999999976664 7899
Q ss_pred EEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 83 RQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 83 ~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
++|++.. ++.+..... .. +.-+.++++|||++|+.+.
T Consensus 455 ~vwd~~~---~~~~~~~~~-----------------------------h~--~~v~~~~~s~~~~~l~s~s 491 (694)
T 3dm0_A 455 RLWDLAA---GVSTRRFVG-----------------------------HT--KDVLSVAFSLDNRQIVSAS 491 (694)
T ss_dssp EEEETTT---TEEEEEEEC-----------------------------CS--SCEEEEEECTTSSCEEEEE
T ss_pred EEEECCC---CcceeEEeC-----------------------------CC--CCEEEEEEeCCCCEEEEEe
Confidence 9999843 444322221 10 1156889999999988774
No 241
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.74 E-value=0.043 Score=45.57 Aligned_cols=71 Identities=10% Similarity=-0.003 Sum_probs=47.4
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCC--CCEEEEEeCCCCc
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLD--DRFLYFSNWLHGD 81 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpD--grfLYvSnRgh~s 81 (222)
-++|+|+|+++...++ +.+|.+|..+. +......++ .+.. .....|.+|++ |++|..+. ..++
T Consensus 14 ~~~~s~~g~~las~s~-D~~v~iw~~~~-~~~~~~~~l-------~gH~-----~~V~~v~~s~~~~g~~l~s~s-~D~~ 78 (297)
T 2pm7_B 14 DAVMDYYGKRMATCSS-DKTIKIFEVEG-ETHKLIDTL-------TGHE-----GPVWRVDWAHPKFGTILASCS-YDGK 78 (297)
T ss_dssp EEEECTTSSEEEEEET-TSCEEEEEBCS-SCBCCCEEE-------CCCS-----SCEEEEEECCGGGCSEEEEEE-TTTE
T ss_pred EEEECCCCCEEEEEeC-CCEEEEEecCC-CCcEEEEEE-------cccc-----CCeEEEEecCCCcCCEEEEEc-CCCE
Confidence 3689999999887765 88899997742 222212221 1110 34678999874 88886655 5789
Q ss_pred EEEEEecC
Q 027522 82 IRQYNIED 89 (222)
Q Consensus 82 I~vf~i~d 89 (222)
|++|++..
T Consensus 79 v~iWd~~~ 86 (297)
T 2pm7_B 79 VMIWKEEN 86 (297)
T ss_dssp EEEEEBSS
T ss_pred EEEEEcCC
Confidence 99999953
No 242
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.73 E-value=0.058 Score=51.68 Aligned_cols=103 Identities=12% Similarity=0.028 Sum_probs=67.8
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCC--CCEEEEEeCCCCc
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLD--DRFLYFSNWLHGD 81 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpD--grfLYvSnRgh~s 81 (222)
-++|+|+++++++.++ +++|.+|... .++........ .. . .....|.+||+ +++|.++.. .+.
T Consensus 14 ~l~~s~dg~~latg~~-dg~I~vwd~~-~~~~~~~~~l~---~h-~--------~~V~~l~~s~~~~~~~l~s~s~-Dg~ 78 (753)
T 3jro_A 14 DAVLDYYGKRLATCSS-DKTIKIFEVE-GETHKLIDTLT---GH-E--------GPVWRVDWAHPKFGTILASCSY-DGK 78 (753)
T ss_dssp EECCCSSSCCEEEEET-TTEEEEEEEE-TTEEEEEEEEC---CC-S--------SCEEEEEECCTTSCSEEEEEET-TSC
T ss_pred EEEECCCCCeEEEEEC-CCcEEEEecC-CCCCccceecc---CC-c--------CceEEEEecCCCCCCEEEEEeC-CCe
Confidence 3679999999888876 7889999764 23343333221 11 1 34689999998 999877764 789
Q ss_pred EEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCC--CCEEEEEe
Q 027522 82 IRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLD--GKRLYVTN 153 (222)
Q Consensus 82 I~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspd--Gk~LyvaN 153 (222)
|.+|++.. +....+..... ... ....++++|+ |+.|+++.
T Consensus 79 I~vwd~~~-~~~~~~~~~~~---------------------------h~~----~V~~v~~sp~~~~~~l~sgs 120 (753)
T 3jro_A 79 VLIWKEEN-GRWSQIAVHAV---------------------------HSA----SVNSVQWAPHEYGPLLLVAS 120 (753)
T ss_dssp EEEEEEET-TEEEEEEEECC---------------------------CSS----CEEEEEECCGGGCSEEEEEE
T ss_pred EEEEECCC-CcccccccccC---------------------------CCC----CeEEEEECCCCCCCEEEEEe
Confidence 99999954 21112111110 011 2678999999 99998886
No 243
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.72 E-value=0.1 Score=42.50 Aligned_cols=73 Identities=18% Similarity=0.372 Sum_probs=47.3
Q ss_pred EEEcCC-CCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 5 FLHDPS-KDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 5 ~afhP~-g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
++|+|+ ++++....+ +.+|.+|...............+ .+. ......+.+||||++|+.+.. .+.|.
T Consensus 44 v~~sp~~~~~l~S~s~-D~~i~vWd~~~~~~~~~~~~~~l-----~~h-----~~~V~~~~~s~dg~~l~s~~~-d~~i~ 111 (340)
T 4aow_A 44 IATTPQFPDMILSASR-DKTIIMWKLTRDETNYGIPQRAL-----RGH-----SHFVSDVVISSDGQFALSGSW-DGTLR 111 (340)
T ss_dssp EEECTTCTTEEEEEET-TSCEEEEEECCSSSCSEEEEEEE-----CCC-----SSCEEEEEECTTSSEEEEEET-TSEEE
T ss_pred EEEeCCCCCEEEEEcC-CCeEEEEECCCCCcccceeeEEE-----eCC-----CCCEEEEEECCCCCEEEEEcc-cccce
Confidence 689998 466666654 89999998753221111111111 111 145689999999999987764 67899
Q ss_pred EEEecC
Q 027522 84 QYNIED 89 (222)
Q Consensus 84 vf~i~d 89 (222)
+|+...
T Consensus 112 ~~~~~~ 117 (340)
T 4aow_A 112 LWDLTT 117 (340)
T ss_dssp EEETTT
T ss_pred EEeecc
Confidence 998743
No 244
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.70 E-value=0.08 Score=42.74 Aligned_cols=74 Identities=8% Similarity=0.166 Sum_probs=48.7
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
+.|+|++ . +...++++|.+|..+ +|+. .+++... +. ......+.+||||++|.++. ..+.|.+
T Consensus 31 l~WS~~~-~--lAvg~D~tV~iWd~~-tg~~--~~~~~~~-----~~-----~~~V~~v~~~~~~~~l~sgs-~Dg~v~i 93 (318)
T 4ggc_A 31 VDWSSGN-V--LAVALDNSVYLWSAS-SGDI--LQLLQME-----QP-----GEYISSVAWIKEGNYLAVGT-SSAEVQL 93 (318)
T ss_dssp EEECTTS-E--EEEEETTEEEEEETT-TCCE--EEEEECC-----ST-----TCCEEEEEECTTSSEEEEEE-TTSEEEE
T ss_pred EEECCCC-E--EEEEeCCEEEEEECC-CCCE--EEEEEec-----CC-----CCeEEEEEECCCCCEEEEEE-CCCcEEE
Confidence 5688886 3 334579999999763 4543 3443322 11 13468999999999997665 5789999
Q ss_pred EEecCCCCCeEEEE
Q 027522 85 YNIEDPKNPVLTGQ 98 (222)
Q Consensus 85 f~i~d~~~~~L~~~ 98 (222)
|++.. ++++..
T Consensus 94 w~~~~---~~~~~~ 104 (318)
T 4ggc_A 94 WDVQQ---QKRLRN 104 (318)
T ss_dssp EETTT---TEEEEE
T ss_pred eecCC---ceeEEE
Confidence 98853 555433
No 245
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.70 E-value=0.015 Score=48.90 Aligned_cols=70 Identities=13% Similarity=0.014 Sum_probs=38.2
Q ss_pred eEEEcC-CCCeEEEEeccC-----ceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEE-EEe
Q 027522 4 RFLHDP-SKDIGFVGCALA-----STMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLY-FSN 76 (222)
Q Consensus 4 r~afhP-~g~~aYvv~ELs-----stV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLY-vSn 76 (222)
.++|+| +++.++.+.+-. ..|+++..+ .+.+. .+.. ...+ .....+.+||||++|+ +++
T Consensus 192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~-~~~~~-----~l~~-~~~~-------~~~~~~~~spdg~~l~~~~~ 257 (396)
T 3c5m_A 192 HPIYRPFDDSTVGFCHEGPHDLVDARMWLVNED-GSNVR-----KIKE-HAEG-------ESCTHEFWIPDGSAMAYVSY 257 (396)
T ss_dssp EEEEETTEEEEEEEEECSCSSSCSCCCEEEETT-SCCCE-----ESSC-CCTT-------EEEEEEEECTTSSCEEEEEE
T ss_pred cceECCCCCCEEEEEecCCCCCCCceEEEEECC-CCcee-----Eeec-cCCC-------ccccceEECCCCCEEEEEec
Confidence 357899 777555555422 357776553 22221 1111 1001 2356789999999754 555
Q ss_pred C-CCCc--EEEEEe
Q 027522 77 W-LHGD--IRQYNI 87 (222)
Q Consensus 77 R-gh~s--I~vf~i 87 (222)
+ +... |.+|++
T Consensus 258 ~~~~~~~~l~~~d~ 271 (396)
T 3c5m_A 258 FKGQTDRVIYKANP 271 (396)
T ss_dssp ETTTCCEEEEEECT
T ss_pred CCCCccceEEEEEC
Confidence 4 3334 777766
No 246
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.65 E-value=0.058 Score=46.93 Aligned_cols=96 Identities=10% Similarity=0.157 Sum_probs=61.3
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
+.+++++ . +...|+++|.+|... +|+. .+...+.. . ......|.+||||++|.+.. ..+.|.+
T Consensus 111 l~wS~~n-~--lAvgld~tV~lWd~~-tg~~--~~~~~~~~-----~-----~~~V~sv~fspdg~~lasgs-~Dg~v~i 173 (420)
T 4gga_A 111 VDWSSGN-V--LAVALDNSVYLWSAS-SGDI--LQLLQMEQ-----P-----GEYISSVAWIKEGNYLAVGT-SSAEVQL 173 (420)
T ss_dssp EEECTTS-E--EEEEETTEEEEEETT-TCCE--EEEEECCS-----T-----TCCEEEEEECTTSSEEEEEE-TTSCEEE
T ss_pred EEECCCC-E--EEEEeCCEEEEEECC-CCCE--EEEEEecC-----C-----CCcEEEEEECCCCCEEEEEE-CCCeEEE
Confidence 4566654 3 334579999999763 4543 33333321 0 03468999999999997665 5789999
Q ss_pred EEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 85 YNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
|++.. ++.+.... |.. -+..+++++++.|..+.
T Consensus 174 Wd~~~---~~~~~~~~-----------------------------~h~----~~v~~~s~~~~~l~sgs 206 (420)
T 4gga_A 174 WDVQQ---QKRLRNMT-----------------------------SHS----ARVGSLSWNSYILSSGS 206 (420)
T ss_dssp EETTT---TEEEEEEC-----------------------------CCS----SCEEEEEEETTEEEEEE
T ss_pred EEcCC---CcEEEEEe-----------------------------CCC----CceEEEeeCCCEEEEEe
Confidence 99853 44432221 222 45677888888877664
No 247
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.64 E-value=0.017 Score=56.22 Aligned_cols=72 Identities=11% Similarity=0.066 Sum_probs=48.4
Q ss_pred EeEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcE
Q 027522 3 IRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDI 82 (222)
Q Consensus 3 vr~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI 82 (222)
.-.+|+|+|+.+-+... +++|.+|.. ++ .+.... . .. +-.......+.+||||++|++++. .+.|
T Consensus 89 ~~vawSPdG~~LAs~s~-dg~V~iwd~--~~------~l~~l~-~-~~---~~~~~sv~svafSPDG~~LAsgs~-DGtV 153 (588)
T 2j04_A 89 RVCKPSPIDDWMAVLSN-NGNVSVFKD--NK------MLTNLD-S-KG---NLSSRTYHCFEWNPIESSIVVGNE-DGEL 153 (588)
T ss_dssp EEEEECSSSSCEEEEET-TSCEEEEET--TE------EEEECC-C-SS---CSTTTCEEEEEECSSSSCEEEEET-TSEE
T ss_pred EEEEECCCCCEEEEEeC-CCcEEEEeC--Cc------eeeecc-C-CC---ccccccEEEEEEcCCCCEEEEEcC-CCEE
Confidence 34789999998877765 777888863 22 112111 1 00 000023679999999999999986 6789
Q ss_pred EEEEecC
Q 027522 83 RQYNIED 89 (222)
Q Consensus 83 ~vf~i~d 89 (222)
.+|++..
T Consensus 154 kIWd~~~ 160 (588)
T 2j04_A 154 QFFSIRK 160 (588)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999954
No 248
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.63 E-value=0.073 Score=42.74 Aligned_cols=72 Identities=13% Similarity=0.065 Sum_probs=49.8
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++| |+++++++.++ +++|.+|..+ ++ ...+.+... . .....|.+|||+++|+++.. .+.|.+
T Consensus 24 ~~~-~~~~~l~s~~~-dg~v~vw~~~-~~--~~~~~~~~~----~--------~~v~~~~~~~~~~~l~~~~~-dg~i~~ 85 (313)
T 3odt_A 24 VVA-VDDSKVASVSR-DGTVRLWSKD-DQ--WLGTVVYTG----Q--------GFLNSVCYDSEKELLLFGGK-DTMING 85 (313)
T ss_dssp EEE-EETTEEEEEET-TSEEEEEEES-SS--EEEEEEEEC----S--------SCEEEEEEETTTTEEEEEET-TSCEEE
T ss_pred EEe-cCCCEEEEEEc-CCcEEEEECC-CC--EEEEEeecC----C--------ccEEEEEECCCCCEEEEecC-CCeEEE
Confidence 466 88888777765 7889988874 22 222222221 1 44689999999999988875 678999
Q ss_pred EEecCCCCCe
Q 027522 85 YNIEDPKNPV 94 (222)
Q Consensus 85 f~i~d~~~~~ 94 (222)
|++.+....+
T Consensus 86 ~~~~~~~~~~ 95 (313)
T 3odt_A 86 VPLFATSGED 95 (313)
T ss_dssp EETTCCTTSC
T ss_pred EEeeecCCCC
Confidence 9996644343
No 249
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.61 E-value=0.095 Score=45.17 Aligned_cols=106 Identities=9% Similarity=0.024 Sum_probs=59.4
Q ss_pred EEEcC-CCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 5 FLHDP-SKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 5 ~afhP-~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
+.|+| +++++.. +-.+.+|.+|.....+.. .+.+ .+. ......|.+||||++|..+. .++.|+
T Consensus 211 ~~~~~~~~~~l~s-gs~D~~v~~wd~~~~~~~--~~~~-------~~h-----~~~v~~v~~~p~~~~l~s~s-~D~~i~ 274 (380)
T 3iz6_a 211 LSINSLNANMFIS-GSCDTTVRLWDLRITSRA--VRTY-------HGH-----EGDINSVKFFPDGQRFGTGS-DDGTCR 274 (380)
T ss_dssp EEECSSSCCEEEE-EETTSCEEEEETTTTCCC--CEEE-------CCC-----SSCCCEEEECTTSSEEEEEC-SSSCEE
T ss_pred EEeecCCCCEEEE-EECCCeEEEEECCCCCcc--eEEE-------CCc-----CCCeEEEEEecCCCeEEEEc-CCCeEE
Confidence 45666 4444443 444777777765322211 1111 111 03457899999999986555 578999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++.. ++.+...... +.. ..........++++|+|++|+++.
T Consensus 275 lwd~~~---~~~~~~~~~~--------------------~~~----~~~~~~~v~~~~~s~~g~~l~~g~ 317 (380)
T 3iz6_a 275 LFDMRT---GHQLQVYNRE--------------------PDR----NDNELPIVTSVAFSISGRLLFAGY 317 (380)
T ss_dssp EEETTT---TEEEEEECCC--------------------CSS----SCCSSCSCSEEEECSSSSEEEEEC
T ss_pred EEECCC---CcEEEEeccc--------------------ccc----cccccCceEEEEECCCCCEEEEEE
Confidence 999843 4332222110 000 000011246799999999999886
No 250
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=96.52 E-value=0.047 Score=54.06 Aligned_cols=96 Identities=8% Similarity=0.088 Sum_probs=64.6
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
-++|+|+++++.+... +.+|.+|... .+ +. ... .+ .. .....|.+|| |++|..+. ..++|.
T Consensus 22 ~lafspdg~~lAsgs~-Dg~I~lw~~~-~~--~~--~~~-~~----~~------~~V~~l~fsp-g~~L~S~s-~D~~v~ 82 (902)
T 2oaj_A 22 AAAFDFTQNLLAIATV-TGEVHIYGQQ-QV--EV--VIK-LE----DR------SAIKEMRFVK-GIYLVVIN-AKDTVY 82 (902)
T ss_dssp EEEEETTTTEEEEEET-TSEEEEECST-TC--EE--EEE-CS----SC------CCEEEEEEET-TTEEEEEE-TTCEEE
T ss_pred EEEECCCCCEEEEEeC-CCEEEEEeCC-Cc--EE--EEE-cC----CC------CCEEEEEEcC-CCEEEEEE-CcCeEE
Confidence 4789999998887775 6788888542 22 11 111 11 11 3468999999 89776555 578999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++.. ++++..+... +....++++|+|++|+++.
T Consensus 83 lWd~~~---~~~~~~~~~~--------------------------------~~V~~v~~sp~g~~l~sgs 117 (902)
T 2oaj_A 83 VLSLYS---QKVLTTVFVP--------------------------------GKITSIDTDASLDWMLIGL 117 (902)
T ss_dssp EEETTT---CSEEEEEECS--------------------------------SCEEEEECCTTCSEEEEEE
T ss_pred EEECCC---CcEEEEEcCC--------------------------------CCEEEEEECCCCCEEEEEc
Confidence 999853 4443333210 1156899999999999986
No 251
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.51 E-value=0.013 Score=53.12 Aligned_cols=63 Identities=11% Similarity=0.055 Sum_probs=39.8
Q ss_pred EEEcCC---CCeEEEEe--ccCceEEEEEeCCC----CCeeEEEEE-EecCcccccccCCCCCCceeEEEEcCCCCEEEE
Q 027522 5 FLHDPS---KDIGFVGC--ALASTMVRFSKTQD----GSWNHEVAI-SVKSLKVQNWILPEMPGLITDFLISLDDRFLYF 74 (222)
Q Consensus 5 ~afhP~---g~~aYvv~--ELsstV~~~~~d~~----g~~~~~q~i-s~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYv 74 (222)
++|||+ ..++||.- .-.+.|.+|.++.. +.+...+++ +-.|.. +. -....|+++||| +||+
T Consensus 85 ia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~--~~------H~g~~l~fgpDG-~Lyv 155 (347)
T 3das_A 85 IALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKG--VI------HNGGRIAFGPDK-MLYA 155 (347)
T ss_dssp EEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCC--SS------CCCCCEEECTTS-CEEE
T ss_pred eEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCC--CC------ccCccccCCCCC-CEEE
Confidence 789996 68889852 23567999988531 244333433 323321 11 234789999999 6999
Q ss_pred Ee
Q 027522 75 SN 76 (222)
Q Consensus 75 Sn 76 (222)
+.
T Consensus 156 t~ 157 (347)
T 3das_A 156 GT 157 (347)
T ss_dssp EC
T ss_pred EE
Confidence 94
No 252
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.47 E-value=0.045 Score=48.02 Aligned_cols=69 Identities=16% Similarity=0.177 Sum_probs=44.0
Q ss_pred EEEcCCC-CeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcC-CCCEEEEEeCCCCcE
Q 027522 5 FLHDPSK-DIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISL-DDRFLYFSNWLHGDI 82 (222)
Q Consensus 5 ~afhP~g-~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSp-DgrfLYvSnRgh~sI 82 (222)
++|||.. +.+.+.. .+.+|.+|..+. +... ..+.. .|. ......|.+|| |+++|+.+. .+++|
T Consensus 125 l~~~P~~~~~lasGs-~dg~i~lWd~~~-~~~~--~~~~~-----~gH-----~~~V~~l~f~p~~~~~l~s~s-~D~~v 189 (435)
T 4e54_B 125 LAWHPTHPSTVAVGS-KGGDIMLWNFGI-KDKP--TFIKG-----IGA-----GGSITGLKFNPLNTNQFYASS-MEGTT 189 (435)
T ss_dssp EEECSSCTTCEEEEE-TTSCEEEECSSC-CSCC--EEECC-----CSS-----SCCCCEEEECSSCTTEEEEEC-SSSCE
T ss_pred EEEeCCCCCEEEEEe-CCCEEEEEECCC-CCce--eEEEc-----cCC-----CCCEEEEEEeCCCCCEEEEEe-CCCEE
Confidence 7899965 4555554 488999997642 2211 11111 111 03468999998 678886655 57899
Q ss_pred EEEEec
Q 027522 83 RQYNIE 88 (222)
Q Consensus 83 ~vf~i~ 88 (222)
++|++.
T Consensus 190 ~iwd~~ 195 (435)
T 4e54_B 190 RLQDFK 195 (435)
T ss_dssp EEEETT
T ss_pred EEeecc
Confidence 999984
No 253
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.39 E-value=0.037 Score=52.66 Aligned_cols=71 Identities=15% Similarity=0.245 Sum_probs=42.5
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeC-----CC
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW-----LH 79 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnR-----gh 79 (222)
..|+|+|+++|.. +.+|..+..+ +|+- .+.++. ....... ....++.+||||++|+.+.. .|
T Consensus 22 ~~w~~dg~~~~~~---~~~i~~~~~~-~~~~--~~~~~~--~~~~~~~-----~~~~~~~~Spdg~~l~~~~~~~~~~r~ 88 (740)
T 4a5s_A 22 LRWISDHEYLYKQ---ENNILVFNAE-YGNS--SVFLEN--STFDEFG-----HSINDYSISPDGQFILLEYNYVKQWRH 88 (740)
T ss_dssp EEECSSSEEEEEE---TTEEEEEETT-TCCE--EEEECT--TTTTTCC-----SCCCEEEECTTSSEEEEEEEEEECSSS
T ss_pred cEECCCCcEEEEc---CCcEEEEECC-CCce--EEEEec--hhhhhhc-----ccccceEECCCCCEEEEEECCeeeEEE
Confidence 5789999877764 7899988764 3432 222221 1111110 11245899999999876653 12
Q ss_pred ---CcEEEEEec
Q 027522 80 ---GDIRQYNIE 88 (222)
Q Consensus 80 ---~sI~vf~i~ 88 (222)
+++.+|++.
T Consensus 89 ~~~~~~~~~d~~ 100 (740)
T 4a5s_A 89 SYTASYDIYDLN 100 (740)
T ss_dssp CEEEEEEEEETT
T ss_pred ccceEEEEEECC
Confidence 567778774
No 254
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.33 E-value=0.06 Score=50.32 Aligned_cols=99 Identities=9% Similarity=0.085 Sum_probs=62.1
Q ss_pred eEEEcCCCC-eEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcE
Q 027522 4 RFLHDPSKD-IGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDI 82 (222)
Q Consensus 4 r~afhP~g~-~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI 82 (222)
.++|+|++. ...+.+-.+.+|.+|... +++. ...+ . +. ......|.+||||++|..+. ..+.|
T Consensus 522 ~~~~~~~~~~~~l~s~s~d~~v~vwd~~-~~~~--~~~~---~----~h-----~~~v~~v~~spdg~~l~sg~-~Dg~i 585 (694)
T 3dm0_A 522 CVRFSPNTLQPTIVSASWDKTVKVWNLS-NCKL--RSTL---A----GH-----TGYVSTVAVSPDGSLCASGG-KDGVV 585 (694)
T ss_dssp EEEECSCSSSCEEEEEETTSCEEEEETT-TCCE--EEEE---C----CC-----SSCEEEEEECTTSSEEEEEE-TTSBC
T ss_pred EEEEeCCCCcceEEEEeCCCeEEEEECC-CCcE--EEEE---c----CC-----CCCEEEEEEeCCCCEEEEEe-CCCeE
Confidence 367888873 233444457888888764 2322 2221 1 11 04468999999999987665 47899
Q ss_pred EEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 83 RQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 83 ~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
.+|++.. ++.+..+.. .. ..+.+++||+|++|.++.
T Consensus 586 ~iwd~~~---~~~~~~~~~----------------------------~~----~v~~~~~sp~~~~l~~~~ 621 (694)
T 3dm0_A 586 LLWDLAE---GKKLYSLEA----------------------------NS----VIHALCFSPNRYWLCAAT 621 (694)
T ss_dssp EEEETTT---TEEEECCBC----------------------------SS----CEEEEEECSSSSEEEEEE
T ss_pred EEEECCC---CceEEEecC----------------------------CC----cEEEEEEcCCCcEEEEEc
Confidence 9999843 443211111 11 257899999999888776
No 255
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.30 E-value=0.32 Score=40.20 Aligned_cols=63 Identities=13% Similarity=0.081 Sum_probs=38.2
Q ss_pred EEEeccCceEEEEEeCCC-CCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCC--CEEEEEeCCCCcEEEEEecC
Q 027522 15 FVGCALASTMVRFSKTQD-GSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDD--RFLYFSNWLHGDIRQYNIED 89 (222)
Q Consensus 15 Yvv~ELsstV~~~~~d~~-g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDg--rfLYvSnRgh~sI~vf~i~d 89 (222)
++.+-.+.+|.+|..... ..+..... + .+. ......|..|||+ ..+.+|.-..++|.+|++..
T Consensus 173 l~sgs~D~~v~lwd~~~~~~~~~~~~~--l-----~~H-----~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 173 FVTGGADNLVKIWKYNSDAQTYVLEST--L-----EGH-----SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp EEEEETTSCEEEEEEETTTTEEEEEEE--E-----CCC-----SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred EEEEcCCCcEEEEEEcCCCceEEEEEE--e-----cCC-----CCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 344445788888876421 12222222 1 111 1446899999996 34446666688999999954
No 256
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.25 E-value=0.15 Score=49.65 Aligned_cols=72 Identities=17% Similarity=0.176 Sum_probs=50.8
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCe-----eEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCC
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSW-----NHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH 79 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~-----~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh 79 (222)
++|||+|+++++.++ +++|-.|.... +.+ ...+++..-..+.. +....|..|||| | ++.-..
T Consensus 135 vafSPDG~~LAsgs~-DGtVkIWd~~~-~~l~~~~~i~l~ti~~~~~gh~--------~~V~sVawSPdg--L-aass~D 201 (588)
T 2j04_A 135 FEWNPIESSIVVGNE-DGELQFFSIRK-NSENTPEFYFESSIRLSDAGSK--------DWVTHIVWYEDV--L-VAALSN 201 (588)
T ss_dssp EEECSSSSCEEEEET-TSEEEEEECCC-CTTTCCCCEEEEEEECSCTTCC--------CCEEEEEEETTE--E-EEEETT
T ss_pred EEEcCCCCEEEEEcC-CCEEEEEECCC-Cccccccceeeeeeeccccccc--------ccEEEEEEcCCc--E-EEEeCC
Confidence 799999999999998 89999998743 432 23344432222212 457899999999 3 344458
Q ss_pred CcEEEEEecC
Q 027522 80 GDIRQYNIED 89 (222)
Q Consensus 80 ~sI~vf~i~d 89 (222)
++|.+|+++.
T Consensus 202 ~tVrlWd~~~ 211 (588)
T 2j04_A 202 NSVFSMTVSA 211 (588)
T ss_dssp CCEEEECCCS
T ss_pred CeEEEEECCC
Confidence 9999999854
No 257
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=96.24 E-value=0.11 Score=47.48 Aligned_cols=63 Identities=13% Similarity=0.044 Sum_probs=39.3
Q ss_pred ceeEEEEcC---CCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCC
Q 027522 59 LITDFLISL---DDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRG 135 (222)
Q Consensus 59 ~~adI~iSp---DgrfLYvSnRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~g 135 (222)
..+.+.+|+ |+..| +|.-.+++|++|++. +++++..+..++. + ..
T Consensus 180 ~v~~l~fs~~~g~~~~L-aSgS~D~TIkIWDl~---TGk~l~tL~g~~~---------------------------~-v~ 227 (356)
T 2w18_A 180 EETILTFAEVQGMQEAL-LGTTIMNNIVIWNLK---TGQLLKKMHIDDS---------------------------Y-QA 227 (356)
T ss_dssp SSCEEEEEEEETSTTEE-EEEETTSEEEEEETT---TCCEEEEEECCC-------------------------------C
T ss_pred ceeeEEeeccCCCCceE-EEecCCCcEEEEECC---CCcEEEEEcCCCc---------------------------c-ee
Confidence 345667777 44544 666678999999884 3666555542110 0 01
Q ss_pred CCeeEEECCCCCEEEEEe
Q 027522 136 GPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 136 gPr~~~lspdGk~LyvaN 153 (222)
.-..+++||||++|++.+
T Consensus 228 ~v~~vafSpdG~~lvs~s 245 (356)
T 2w18_A 228 SVCHKAYSEMGLLFIVLS 245 (356)
T ss_dssp CCEEEEEEETTEEEEEEC
T ss_pred eeEEEEECCCCCEEEEec
Confidence 245678999999887755
No 258
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.19 E-value=0.22 Score=43.17 Aligned_cols=96 Identities=14% Similarity=0.158 Sum_probs=60.6
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
.++|+|+++++++.++ +++|.+|... +|+ ..+.+... . .....+.++ +++|.++. ..+.|.
T Consensus 315 ~~~~~~~~~~l~sg~~-dg~i~vwd~~-~~~--~~~~~~~h----~--------~~v~~~~~~--~~~l~s~s-~dg~v~ 375 (464)
T 3v7d_B 315 STIYDHERKRCISASM-DTTIRIWDLE-NGE--LMYTLQGH----T--------ALVGLLRLS--DKFLVSAA-ADGSIR 375 (464)
T ss_dssp EEEEETTTTEEEEEET-TSCEEEEETT-TTE--EEEEECCC----S--------SCEEEEEEC--SSEEEEEE-TTSEEE
T ss_pred EEEEcCCCCEEEEEeC-CCcEEEEECC-CCc--EEEEEeCC----C--------CcEEEEEEc--CCEEEEEe-CCCcEE
Confidence 4789999999888775 7889888764 342 22222111 1 335666666 67776665 477899
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 84 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 84 vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
+|++.. ++..-.... +.. ...++++++|++|.++.
T Consensus 376 vwd~~~---~~~~~~~~~----------------------------~~~----~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 376 GWDAND---YSRKFSYHH----------------------------TNL----SAITTFYVSDNILVSGS 410 (464)
T ss_dssp EEETTT---CCEEEEEEC----------------------------TTC----CCEEEEEECSSEEEEEE
T ss_pred EEECCC---CceeeeecC----------------------------CCC----ccEEEEEeCCCEEEEec
Confidence 999854 222111111 112 56789999999887775
No 259
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.18 E-value=0.18 Score=42.29 Aligned_cols=69 Identities=9% Similarity=-0.039 Sum_probs=46.1
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcC--CCCEEEEEeCCCCcE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISL--DDRFLYFSNWLHGDI 82 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSp--DgrfLYvSnRgh~sI 82 (222)
++|+|+|+++..... +.+|.+|... ++........ .+.. .....|.+|+ ++++|..+. ..+.|
T Consensus 19 v~~s~~g~~lasgs~-D~~v~lwd~~-~~~~~~~~~l-------~gH~-----~~V~~v~~~~~~~~~~l~s~s-~D~~v 83 (316)
T 3bg1_A 19 AQMDYYGTRLATCSS-DRSVKIFDVR-NGGQILIADL-------RGHE-----GPVWQVAWAHPMYGNILASCS-YDRKV 83 (316)
T ss_dssp EEECGGGCEEEEEET-TTEEEEEEEE-TTEEEEEEEE-------ECCS-----SCEEEEEECCGGGSSCEEEEE-TTSCE
T ss_pred eeEcCCCCEEEEEeC-CCeEEEEEec-CCCcEEEEEE-------cCCC-----ccEEEEEeCCCCCCCEEEEEE-CCCEE
Confidence 689999998877664 8889988764 2332222221 1110 3468899986 488876655 47899
Q ss_pred EEEEec
Q 027522 83 RQYNIE 88 (222)
Q Consensus 83 ~vf~i~ 88 (222)
.+|++.
T Consensus 84 ~iWd~~ 89 (316)
T 3bg1_A 84 IIWREE 89 (316)
T ss_dssp EEECCS
T ss_pred EEEECC
Confidence 999884
No 260
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.10 E-value=0.044 Score=49.90 Aligned_cols=123 Identities=10% Similarity=0.072 Sum_probs=70.1
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEE---cCCCCEEEEEeC----
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLI---SLDDRFLYFSNW---- 77 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~i---SpDgrfLYvSnR---- 77 (222)
..||+....+|+.+=..++|.++..+ ++..+ .+ .++.....|.. ...++.|.+ .|+||.|.|++.
T Consensus 18 ~~wd~~~g~~~vs~l~~g~V~~~~~~-~~~~~--~~-~~~~~s~~g~~----~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 18 TIYDRTRQVFYQSNLYKGRIEVYNPK-TQSHF--NV-VIDGASSNGDG----EQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTT-TCCEE--EE-CCTTTCCSSCC----SEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred ccCcCCCCEEEEEeccCCEEEEEcCC-CCeEE--EE-ecCCccccCCC----cceeeEEEEeccCCCCcEEEEEcccccc
Confidence 46889999999999999999999653 23332 22 22211100210 024589999 699777776773
Q ss_pred --------CCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEE
Q 027522 78 --------LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRL 149 (222)
Q Consensus 78 --------gh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~L 149 (222)
+...|..|+..-..+++++-.+.+.+... ..+...|+. .++|++|+++++|. .
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~-----------------~~~~~~g~~-~~~~nDvavD~~Gn-a 150 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQD-----------------EFEKKAGKR-PFGVVQSAQDRDGN-S 150 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHH-----------------HHHHHHSSC-CEEEEEEEECTTSC-E
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccc-----------------ccccccccc-ccCCceeEECCCCC-E
Confidence 45668888874112344433333311000 000000111 24588999999986 8
Q ss_pred EEEeC
Q 027522 150 YVTNS 154 (222)
Q Consensus 150 yvaNs 154 (222)
||+++
T Consensus 151 YVt~s 155 (334)
T 2p9w_A 151 YVAFA 155 (334)
T ss_dssp EEEEE
T ss_pred EEeCC
Confidence 88875
No 261
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.09 E-value=0.019 Score=50.46 Aligned_cols=69 Identities=9% Similarity=0.100 Sum_probs=44.3
Q ss_pred EEEcC-CCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 5 FLHDP-SKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 5 ~afhP-~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
++|+| ++++++..+ .+.+|.+|... .+.. +.+... ... ......+.+|||+++|.+.+. .+.|.
T Consensus 170 l~f~p~~~~~l~s~s-~D~~v~iwd~~-~~~~---~~~~~~-~~~--------~~~~~~~~~~~~~~~l~~g~~-dg~i~ 234 (435)
T 4e54_B 170 LKFNPLNTNQFYASS-MEGTTRLQDFK-GNIL---RVFASS-DTI--------NIWFCSLDVSASSRMVVTGDN-VGNVI 234 (435)
T ss_dssp EEECSSCTTEEEEEC-SSSCEEEEETT-SCEE---EEEECC-SSC--------SCCCCCEEEETTTTEEEEECS-SSBEE
T ss_pred EEEeCCCCCEEEEEe-CCCEEEEeecc-CCce---eEEecc-CCC--------CccEEEEEECCCCCEEEEEeC-CCcEe
Confidence 67998 466665554 58899888763 2222 222111 110 123467899999999987764 67899
Q ss_pred EEEec
Q 027522 84 QYNIE 88 (222)
Q Consensus 84 vf~i~ 88 (222)
+|++.
T Consensus 235 ~wd~~ 239 (435)
T 4e54_B 235 LLNMD 239 (435)
T ss_dssp EEESS
T ss_pred eeccC
Confidence 99984
No 262
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.97 E-value=0.17 Score=48.46 Aligned_cols=70 Identities=9% Similarity=0.159 Sum_probs=49.7
Q ss_pred EEEcCC--CCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCC--CCEEEEEeCCCC
Q 027522 5 FLHDPS--KDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLD--DRFLYFSNWLHG 80 (222)
Q Consensus 5 ~afhP~--g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpD--grfLYvSnRgh~ 80 (222)
++|+|+ ++++++..+ +++|.+|..+ ++++......... . .....+.+||+ +++|+++.+ .+
T Consensus 59 l~~s~~~~~~~l~s~s~-Dg~I~vwd~~-~~~~~~~~~~~~h----~--------~~V~~v~~sp~~~~~~l~sgs~-dg 123 (753)
T 3jro_A 59 VDWAHPKFGTILASCSY-DGKVLIWKEE-NGRWSQIAVHAVH----S--------ASVNSVQWAPHEYGPLLLVASS-DG 123 (753)
T ss_dssp EEECCTTSCSEEEEEET-TSCEEEEEEE-TTEEEEEEEECCC----S--------SCEEEEEECCGGGCSEEEEEET-TS
T ss_pred EEecCCCCCCEEEEEeC-CCeEEEEECC-CCcccccccccCC----C--------CCeEEEEECCCCCCCEEEEEeC-CC
Confidence 567777 888877776 8889998774 3444333332211 1 44689999999 999887774 67
Q ss_pred cEEEEEecC
Q 027522 81 DIRQYNIED 89 (222)
Q Consensus 81 sI~vf~i~d 89 (222)
.|.+|++..
T Consensus 124 ~I~vwdl~~ 132 (753)
T 3jro_A 124 KVSVVEFKE 132 (753)
T ss_dssp EEEEEECCS
T ss_pred cEEEEEeec
Confidence 999999965
No 263
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.97 E-value=0.1 Score=47.51 Aligned_cols=73 Identities=14% Similarity=0.113 Sum_probs=49.5
Q ss_pred EEEcCCCCeEEEEeccC-ceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 5 FLHDPSKDIGFVGCALA-STMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELs-stV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
++..++| .+||.+.+. ++|+++.. +|+ .+ ...-+.+...... ...+.|+++|||+.|+|..- .+.|.
T Consensus 142 vavD~~G-naYVt~s~~~~~I~rV~p--dG~-~~-~~~~~~~~~~~~~------~G~nGIv~~pdg~~Liv~~~-~g~L~ 209 (334)
T 2p9w_A 142 SAQDRDG-NSYVAFALGMPAIARVSA--DGK-TV-STFAWESGNGGQR------PGYSGITFDPHSNKLIAFGG-PRALT 209 (334)
T ss_dssp EEECTTS-CEEEEEEESSCEEEEECT--TSC-CE-EEEEECCCCSSSC------CSCSEEEEETTTTEEEEESS-SSSEE
T ss_pred eEECCCC-CEEEeCCCCCCeEEEEeC--CCC-EE-eeeeecCCCcccc------cCcceEEEeCCCCEEEEEcC-CCeEE
Confidence 5667765 489999999 99998865 454 21 1111111100000 23589999999999999987 88999
Q ss_pred EEEecC
Q 027522 84 QYNIED 89 (222)
Q Consensus 84 vf~i~d 89 (222)
.|++..
T Consensus 210 ~fD~~~ 215 (334)
T 2p9w_A 210 AFDVSK 215 (334)
T ss_dssp EEECSS
T ss_pred EEcCCC
Confidence 999863
No 264
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=95.93 E-value=0.23 Score=44.65 Aligned_cols=69 Identities=13% Similarity=0.106 Sum_probs=48.3
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 83 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~ 83 (222)
-++|||+....++.+-.+.+|.+|.... + . ....... .. .....+..||||++|++++ ..+.|.
T Consensus 154 ~v~~~p~~~~~las~s~Dg~v~iwD~~~-~--~--~~~~~~~--~~--------~~v~~v~wspdg~~lasgs-~dg~v~ 217 (434)
T 2oit_A 154 DMKWNPTVPSMVAVCLADGSIAVLQVTE-T--V--KVCATLP--ST--------VAVTSVCWSPKGKQLAVGK-QNGTVV 217 (434)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEEESS-S--E--EEEEEEC--GG--------GCEEEEEECTTSSCEEEEE-TTSCEE
T ss_pred EEEECCCCCCEEEEEECCCeEEEEEcCC-C--c--ceeeccC--CC--------CceeEEEEcCCCCEEEEEc-CCCcEE
Confidence 3689999666666666799999998742 3 1 1112211 11 3468899999999999888 567899
Q ss_pred EEEec
Q 027522 84 QYNIE 88 (222)
Q Consensus 84 vf~i~ 88 (222)
+|++.
T Consensus 218 iwd~~ 222 (434)
T 2oit_A 218 QYLPT 222 (434)
T ss_dssp EECTT
T ss_pred EEccC
Confidence 99874
No 265
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=95.88 E-value=0.12 Score=44.97 Aligned_cols=59 Identities=10% Similarity=0.063 Sum_probs=36.6
Q ss_pred cCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcC--------CCCEEEEEeCCCCcEEEEEecC
Q 027522 20 LASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISL--------DDRFLYFSNWLHGDIRQYNIED 89 (222)
Q Consensus 20 LsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSp--------DgrfLYvSnRgh~sI~vf~i~d 89 (222)
-+.+|-.+..+ .+.....+.+..+ .|.. +...+|.+|| ||++| +|.-.+++|++|++..
T Consensus 109 ~d~~v~lw~~~-~~~~~~~~~~~~~----~gH~-----~~v~~v~~~p~~~~~~~~d~~~l-as~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 109 QDNTVRLIITK-NETIITQHVLGGK----SGHH-----NFVNDIDIADVYSADNRLAEQVI-ASVGDDCTLIIWRLTD 175 (393)
T ss_dssp TTSCEEEEEEE-TTEEEEEEEECTT----TSCS-----SCEEEEEEEEEECTTCSEEEEEE-EEEETTSEEEEEEEET
T ss_pred CCCcEEEEECC-CCccceeeeeccc----CCCC-----CceEEEEEccccccccCCCCCEE-EEEECCCeEEEEECCC
Confidence 46677777653 2333333333332 2221 4578999998 88888 5555688999999954
No 266
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=95.85 E-value=0.13 Score=44.75 Aligned_cols=108 Identities=13% Similarity=0.044 Sum_probs=55.9
Q ss_pred cCCCCeEEEEeccCceEEEEEeCC--CC-CeeEE----EEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCC
Q 027522 8 DPSKDIGFVGCALASTMVRFSKTQ--DG-SWNHE----VAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHG 80 (222)
Q Consensus 8 hP~g~~aYvv~ELsstV~~~~~d~--~g-~~~~~----q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~ 80 (222)
.|+++.++..+. +.+|.++.... .+ .+... ..+...|..... .......+.+...+.++.+.++.-.++
T Consensus 264 ~~dg~~l~s~s~-d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~sgs~Dg 339 (393)
T 4gq1_A 264 GSDGSGILAMCK-SGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGI---SLFPSLLGACPHPRYMDYFATAHSQHG 339 (393)
T ss_dssp TTTTCEEEEECT-TSEEEEEEC-------------------CCSCSEEEE---CSSCCSSCCEECSSCTTEEEEEETTTT
T ss_pred cCCCCEEEEEeC-CCCEEEEECccCCCCceEeeecCccccEEEccccccc---cccCcceeEEEccCCCCEEEEEECCCC
Confidence 488998877665 77888876421 11 11000 001111111000 001112233334455666667776788
Q ss_pred cEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 81 DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 81 sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
.|.+|++.. +.... . ..++ +.. -+.+++||||++|.+|.
T Consensus 340 ~V~lwd~~~-~~~~~--~-~~~~--------------------------~~~----V~svafspdG~~LA~as 378 (393)
T 4gq1_A 340 LIQLINTYE-KDSNS--I-PIQL--------------------------GMP----IVDFCWHQDGSHLAIAT 378 (393)
T ss_dssp EEEEEETTC-TTCCE--E-EEEC--------------------------SSC----EEEEEECTTSSEEEEEE
T ss_pred EEEEEECCC-CcEEE--E-ecCC--------------------------CCc----EEEEEEcCCCCEEEEEe
Confidence 999999854 22222 1 1110 122 58899999999999887
No 267
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.80 E-value=0.16 Score=44.00 Aligned_cols=79 Identities=11% Similarity=0.115 Sum_probs=53.3
Q ss_pred CCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCccc
Q 027522 54 PEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRL 133 (222)
Q Consensus 54 ~~~~~~~adI~iSpDgrfLYvSnRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~ 133 (222)
+.|....+.|..+||+..||+.+...+.|..++. . +++..++..+|. ..
T Consensus 23 ~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~---~-g~v~~~i~l~g~--------------------------~D- 71 (255)
T 3qqz_A 23 AGITNNISSLTWSAQSNTLFSTINKPAAIVEMTT---N-GDLIRTIPLDFV--------------------------KD- 71 (255)
T ss_dssp TTCCSCEEEEEEETTTTEEEEEEETTEEEEEEET---T-CCEEEEEECSSC--------------------------SS-
T ss_pred CCcccCcceeEEeCCCCEEEEEECCCCeEEEEeC---C-CCEEEEEecCCC--------------------------CC-
Confidence 3344568999999999999975444666555543 2 677788877542 12
Q ss_pred CCCCeeEEECCCCCEEEEEeCCCCccccccccccccCCcEEEEEEeeCC
Q 027522 134 RGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSE 182 (222)
Q Consensus 134 ~ggPr~~~lspdGk~LyvaNsl~~~wd~Q~yp~~~s~~~~i~~~dvd~~ 182 (222)
+--+++.++|+ ++|+. + ....++.++++..
T Consensus 72 ---~EGIa~~~~g~-~~vs~--------E-------~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 72 ---LETIEYIGDNQ-FVISD--------E-------RDYAIYVISLTPN 101 (255)
T ss_dssp ---EEEEEECSTTE-EEEEE--------T-------TTTEEEEEEECTT
T ss_pred ---hHHeEEeCCCE-EEEEE--------C-------CCCcEEEEEcCCC
Confidence 77788888885 66777 3 3466667776643
No 268
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.79 E-value=0.034 Score=48.68 Aligned_cols=64 Identities=17% Similarity=0.293 Sum_probs=41.5
Q ss_pred EEEcCCCCeEEEEe---ccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCc
Q 027522 5 FLHDPSKDIGFVGC---ALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGD 81 (222)
Q Consensus 5 ~afhP~g~~aYvv~---ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~s 81 (222)
.+++|+++++|... .-...|.+...+ |+- .+.++-- . . +.+++||+.||.+..+...
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d--Gs~--~~~lt~~------~------~----~~~~~~g~~iy~t~~g~~~ 168 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRID--GEE--KKKIKNH------Y------L----FTCNTSDRYFYYNNPKNGQ 168 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETT--SCC--CEEEESS------C------C----CCSEEETTEEEEECTTTCC
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECC--CCC--eEEEeCC------C------c----eEeeEECCEEEEEeCCCce
Confidence 46888999999887 445567777664 321 2222211 0 1 2358899999988887777
Q ss_pred EEEEEec
Q 027522 82 IRQYNIE 88 (222)
Q Consensus 82 I~vf~i~ 88 (222)
|.+.+++
T Consensus 169 Iy~~~l~ 175 (302)
T 3s25_A 169 LYRYDTA 175 (302)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 7777663
No 269
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.74 E-value=0.26 Score=41.53 Aligned_cols=75 Identities=11% Similarity=-0.037 Sum_probs=42.6
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
.++.|+|+.++ . -+..|..+.. +|+. +-.+..+ .. .....+..++||+.|++.+.. .-++
T Consensus 42 ~~~~pdG~ilv-s--~~~~V~~~d~--~G~~--~W~~~~~-~~----------~~~~~~~~~~dG~~lv~~~~~--~~~v 101 (276)
T 3no2_A 42 VAATKAGEILF-S--YSKGAKMITR--DGRE--LWNIAAP-AG----------CEMQTARILPDGNALVAWCGH--PSTI 101 (276)
T ss_dssp EEECTTSCEEE-E--CBSEEEEECT--TSCE--EEEEECC-TT----------CEEEEEEECTTSCEEEEEEST--TEEE
T ss_pred eEECCCCCEEE-e--CCCCEEEECC--CCCE--EEEEcCC-CC----------ccccccEECCCCCEEEEecCC--CCEE
Confidence 35678887655 2 2455666543 4542 2223322 10 123567889999999887642 3455
Q ss_pred EEecCCCCCeEEEEEEe
Q 027522 85 YNIEDPKNPVLTGQIWV 101 (222)
Q Consensus 85 f~i~d~~~~~L~~~v~~ 101 (222)
+.+ ++ .++++-++..
T Consensus 102 ~~v-d~-~Gk~l~~~~~ 116 (276)
T 3no2_A 102 LEV-NM-KGEVLSKTEF 116 (276)
T ss_dssp EEE-CT-TSCEEEEEEE
T ss_pred EEE-eC-CCCEEEEEec
Confidence 666 33 4777665554
No 270
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=95.67 E-value=0.43 Score=45.28 Aligned_cols=55 Identities=5% Similarity=0.063 Sum_probs=33.0
Q ss_pred EEEcCCCC-eEEEEeccCc---eEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEe
Q 027522 5 FLHDPSKD-IGFVGCALAS---TMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSN 76 (222)
Q Consensus 5 ~afhP~g~-~aYvv~ELss---tV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSn 76 (222)
+.|+|||+ .||...+-++ +|.++.. ++|+.... .+... ....+..| ||+.||.+.
T Consensus 134 ~~~SpDg~~lAy~~~~~G~~~~~i~v~dl-~tg~~~~~---~~~~~------------k~~~~~Ws-Dg~~l~y~~ 192 (693)
T 3iuj_A 134 LSFSRDGRILAYSLSLAGSDWREIHLMDV-ESKQPLET---PLKDV------------KFSGISWL-GNEGFFYSS 192 (693)
T ss_dssp EEECTTSSEEEEEEECSSCCEEEEEEEET-TTCSEEEE---EEEEE------------ESCCCEEE-TTTEEEEEE
T ss_pred EEECCCCCEEEEEEecCCCceEEEEEEEC-CCCCCCcc---ccCCc------------eeccEEEe-CCCEEEEEE
Confidence 57999998 6788888775 3444444 35654221 22110 01456799 999776554
No 271
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.67 E-value=0.31 Score=42.28 Aligned_cols=102 Identities=12% Similarity=0.057 Sum_probs=64.2
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCC-CCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeC--CCC
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQ-DGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW--LHG 80 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~-~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnR--gh~ 80 (222)
.+.++|+++++..... +++|.++.... .......+... + ..+....+..+|++..+.++.- .++
T Consensus 235 ~~~~~~~g~~l~s~~~-D~~v~i~~~~~~~~~~~~~~~~~-------~-----~~~~V~~~~~~p~~~~~la~~~gs~D~ 301 (420)
T 4gga_A 235 GLRWAPDGRHLASGGN-DNLVNVWPSAPGEGGWVPLQTFT-------Q-----HQGAVKAVAWCPWQSNVLATGGGTSDR 301 (420)
T ss_dssp EEEECTTSSEEEEEET-TSCEEEEESSCCSSCSCCSEEEC-------C-----CSSCEEEEEECTTCTTEEEEEECTTTC
T ss_pred eeeecCCCCeeeeeec-cccceEEeeccccccceeeeeec-------c-----cCCceeeeeeCCCcccEEEEEeecCCC
Confidence 3567888887776655 67777776531 11111111111 0 1144678999998887776643 357
Q ss_pred cEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 81 DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 81 sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
.|.+|++.. +++...+... .. ...+.++|+++.|+++.
T Consensus 302 ~I~iwd~~t---~~~~~~~~~~----------------------------~~----v~~~~~~~~~~~lv~~s 339 (420)
T 4gga_A 302 HIRIWNVCS---GACLSAVDAH----------------------------SQ----VCSILWSPHYKELISGH 339 (420)
T ss_dssp EEEEEETTT---TEEEEEEECS----------------------------SC----EEEEEEETTTTEEEEEE
T ss_pred EEEEEeCCc---cccceeeccc----------------------------cc----eeeeeecCCCCeEEEEE
Confidence 899998843 5565444431 22 66789999999999886
No 272
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=95.65 E-value=0.21 Score=47.47 Aligned_cols=31 Identities=10% Similarity=0.059 Sum_probs=23.1
Q ss_pred ceeEEEEcCCCCEEEEEeC-C---CCcEEEEEecC
Q 027522 59 LITDFLISLDDRFLYFSNW-L---HGDIRQYNIED 89 (222)
Q Consensus 59 ~~adI~iSpDgrfLYvSnR-g---h~sI~vf~i~d 89 (222)
....+.+|||||+|+++.+ . ...|.+++++.
T Consensus 269 ~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~ 303 (741)
T 1yr2_A 269 RGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTN 303 (741)
T ss_dssp CEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEET
T ss_pred EEEEEEECCCCCEEEEEEEccCCCcceEEEEECCC
Confidence 3578899999999886654 2 45788888854
No 273
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.64 E-value=0.11 Score=43.46 Aligned_cols=62 Identities=15% Similarity=0.245 Sum_probs=38.8
Q ss_pred EEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCC----CEEEEEeCCCCcEEEEEecC
Q 027522 15 FVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDD----RFLYFSNWLHGDIRQYNIED 89 (222)
Q Consensus 15 Yvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDg----rfLYvSnRgh~sI~vf~i~d 89 (222)
++..-.+.+|.+|.....+.+...+. + .+. .....++.+|||+ ++| +|.-..+.|.+|++.+
T Consensus 182 l~sgs~D~~v~lWd~~~~~~~~~~~~---l----~~h-----~~~V~~v~~sp~~~~~~~~l-as~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 182 FASGGCDNLIKLWKEEEDGQWKEEQK---L----EAH-----SDWVRDVAWAPSIGLPTSTI-ASCSQDGRVFIWTCDD 247 (316)
T ss_dssp EECCBTTSBCCEEEECTTSCEEEEEC---C----BCC-----SSCEEEEECCCCSSCSCCEE-EEEETTCEEEEEECSS
T ss_pred EEEecCCCeEEEEEeCCCCccceeee---c----ccC-----CCceEEEEecCCCCCCCceE-EEEcCCCeEEEEEccC
Confidence 44444577888887643344443322 1 111 1346899999997 555 5555688999999964
No 274
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=95.64 E-value=0.39 Score=41.61 Aligned_cols=57 Identities=7% Similarity=-0.025 Sum_probs=39.7
Q ss_pred EEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEE
Q 027522 62 DFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQ 141 (222)
Q Consensus 62 dI~iSpDgrfLYvSnRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~ 141 (222)
-..+++++++|+++.. .+.|.+|++.. ++.+..... . .+....++
T Consensus 273 v~~~~~~~~~l~~~~~-d~~i~vwd~~~---~~~~~~~~~-----------------------------~--~~~v~~~~ 317 (464)
T 3v7d_B 273 VRTVSGHGNIVVSGSY-DNTLIVWDVAQ---MKCLYILSG-----------------------------H--TDRIYSTI 317 (464)
T ss_dssp EEEEEEETTEEEEEET-TSCEEEEETTT---TEEEEEECC-----------------------------C--SSCEEEEE
T ss_pred EEEEcCCCCEEEEEeC-CCeEEEEECCC---CcEEEEecC-----------------------------C--CCCEEEEE
Confidence 3456999999988774 67899999843 444332221 0 01257899
Q ss_pred ECCCCCEEEEEe
Q 027522 142 LSLDGKRLYVTN 153 (222)
Q Consensus 142 lspdGk~LyvaN 153 (222)
++|+|++|+++.
T Consensus 318 ~~~~~~~l~sg~ 329 (464)
T 3v7d_B 318 YDHERKRCISAS 329 (464)
T ss_dssp EETTTTEEEEEE
T ss_pred EcCCCCEEEEEe
Confidence 999999999886
No 275
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.62 E-value=0.14 Score=48.24 Aligned_cols=30 Identities=7% Similarity=0.081 Sum_probs=21.5
Q ss_pred ceeEEEEcCCCCEEE-EEeCCC---CcEEEEEec
Q 027522 59 LITDFLISLDDRFLY-FSNWLH---GDIRQYNIE 88 (222)
Q Consensus 59 ~~adI~iSpDgrfLY-vSnRgh---~sI~vf~i~ 88 (222)
....+.+||||++|. .+.+.. ..|.+++++
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 357899999999875 444432 468888874
No 276
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.34 E-value=0.5 Score=40.97 Aligned_cols=62 Identities=13% Similarity=0.087 Sum_probs=40.2
Q ss_pred eeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCee
Q 027522 60 ITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQM 139 (222)
Q Consensus 60 ~adI~iSpDgrfLYvSnRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~ 139 (222)
...+.. ++++|+++. ..+.|.+|++.. ++++..+.... .....+....
T Consensus 365 v~~~~~--~~~~l~s~~-~dg~v~iwd~~~---~~~~~~~~~~~--------------------------~~~~~~~v~~ 412 (445)
T 2ovr_B 365 VTCLQF--NKNFVITSS-DDGTVKLWDLKT---GEFIRNLVTLE--------------------------SGGSGGVVWR 412 (445)
T ss_dssp EEEEEE--CSSEEEEEE-TTSEEEEEETTT---CCEEEEEEECT--------------------------TGGGTCEEEE
T ss_pred EEEEEE--CCCEEEEEe-CCCeEEEEECCC---Cceeeeeeccc--------------------------cCCCCceEEE
Confidence 455555 578887766 578999999853 55655543210 0011122688
Q ss_pred EEECCCCCEEEEEe
Q 027522 140 IQLSLDGKRLYVTN 153 (222)
Q Consensus 140 ~~lspdGk~LyvaN 153 (222)
++++|+|..|.++.
T Consensus 413 ~~~s~~~~~la~~~ 426 (445)
T 2ovr_B 413 IRASNTKLVCAVGS 426 (445)
T ss_dssp EEECSSEEEEEEEC
T ss_pred EEecCCEEEEEEcc
Confidence 99999999998887
No 277
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=95.25 E-value=0.27 Score=47.55 Aligned_cols=55 Identities=18% Similarity=0.170 Sum_probs=32.5
Q ss_pred EEEc-CCCC-eEEEEeccCc---eEEEEEeCCCC-CeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEe
Q 027522 5 FLHD-PSKD-IGFVGCALAS---TMVRFSKTQDG-SWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSN 76 (222)
Q Consensus 5 ~afh-P~g~-~aYvv~ELss---tV~~~~~d~~g-~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSn 76 (222)
+.|+ |||+ .||+..+-++ +|+++..+ +| +. ++.... ...+.+..||||+.||.+.
T Consensus 179 ~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~-~g~~~--------l~~~~~--------~~~~~~~WspDg~~l~y~~ 239 (751)
T 2xe4_A 179 VKPAPPEHDLVAFSVDMSGNEVYTIEFKRIS-DPSQT--------IADKVS--------GTNGEIVWGPDHTSLFYVT 239 (751)
T ss_dssp EEECTTTTCEEEEEEESSSSSCEEEEEEETT-CTTCC--------CCCCEE--------EECSCCEECSSTTEEEEEE
T ss_pred eEecCCCCCEEEEEEeCCCCceEEEEEEECC-CCCEe--------CCcccc--------CceeeEEEecCCCEEEEEE
Confidence 5789 9997 6777776554 36666543 34 31 111111 1125788999997666554
No 278
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.06 E-value=0.31 Score=45.85 Aligned_cols=73 Identities=11% Similarity=0.003 Sum_probs=41.5
Q ss_pred EEEcCCCCeEEEEecc------------CceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEE
Q 027522 5 FLHDPSKDIGFVGCAL------------ASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFL 72 (222)
Q Consensus 5 ~afhP~g~~aYvv~EL------------sstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfL 72 (222)
++|+|||+.+|....- ...|+++... ++.-+...+...+ . . +.....+.+|||||+|
T Consensus 173 ~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~-t~~~~~~lv~~~~-~---~------~~~~~~~~~SpDG~~l 241 (695)
T 2bkl_A 173 PKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLG-TEPSKDTVVHERT-G---D------PTTFLQSDLSRDGKYL 241 (695)
T ss_dssp CEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETT-SCGGGCEEEECCC-C---C------TTCEEEEEECTTSCCE
T ss_pred eEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECC-CCchhceEEEecC-C---C------CEEEEEEEECCCCCEE
Confidence 6899999877666541 2337777653 2322212221111 1 0 1235788999999999
Q ss_pred EEEeCCC-CcEEEEEec
Q 027522 73 YFSNWLH-GDIRQYNIE 88 (222)
Q Consensus 73 YvSnRgh-~sI~vf~i~ 88 (222)
.++.... +...+|-++
T Consensus 242 ~~~~~~~~~~~~l~~~~ 258 (695)
T 2bkl_A 242 FVYILRGWSENDVYWKR 258 (695)
T ss_dssp EEEEEETTTEEEEEEEC
T ss_pred EEEEeCCCCceEEEEEc
Confidence 8766544 455555553
No 279
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.01 E-value=0.062 Score=47.05 Aligned_cols=63 Identities=16% Similarity=0.149 Sum_probs=40.0
Q ss_pred EEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCC-cEEE
Q 027522 6 LHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHG-DIRQ 84 (222)
Q Consensus 6 afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~-sI~v 84 (222)
+++|+++.+|-...-..+|.+...+ |.- .+++. .+. ..+.++|+|++||-+.|..+ .|.+
T Consensus 151 ~~~~~g~~iy~t~~g~~~Iy~~~l~--g~~--~~~l~------~~~---------~~~~~~P~g~~iy~t~~~~~~~I~~ 211 (302)
T 3s25_A 151 TCNTSDRYFYYNNPKNGQLYRYDTA--SQS--EALFY------DCN---------CYKPVVLDDTNVYYMDVNRDNAIVH 211 (302)
T ss_dssp CSEEETTEEEEECTTTCCEEEEETT--TTE--EEEEE------CSC---------EEEEEEEETTEEEEEEGGGTTEEEE
T ss_pred EeeEECCEEEEEeCCCceEEEEECC--CCC--EEEEe------CCC---------ccceeeecCCEEEEEEcCCCcEEEE
Confidence 4678899999888756778888753 332 22331 111 12346799999999999754 3444
Q ss_pred EEe
Q 027522 85 YNI 87 (222)
Q Consensus 85 f~i 87 (222)
-++
T Consensus 212 ~~l 214 (302)
T 3s25_A 212 VNI 214 (302)
T ss_dssp ECS
T ss_pred EEC
Confidence 433
No 280
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=94.88 E-value=1 Score=42.80 Aligned_cols=30 Identities=17% Similarity=0.183 Sum_probs=21.2
Q ss_pred ceeEEEEcCCCCEE-EEEeCCCC---cEEEEEec
Q 027522 59 LITDFLISLDDRFL-YFSNWLHG---DIRQYNIE 88 (222)
Q Consensus 59 ~~adI~iSpDgrfL-YvSnRgh~---sI~vf~i~ 88 (222)
....+.+||||++| |++.++.. .|.+++++
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~ 197 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVA 197 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETT
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECC
Confidence 35789999999987 45555322 48888774
No 281
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=94.63 E-value=0.24 Score=39.87 Aligned_cols=70 Identities=10% Similarity=0.113 Sum_probs=49.3
Q ss_pred eEEEcCCCCeEEEEec-cCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcE
Q 027522 4 RFLHDPSKDIGFVGCA-LASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDI 82 (222)
Q Consensus 4 r~afhP~g~~aYvv~E-LsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI 82 (222)
...|+|+++..++..- -+++|.+|... +++ ..+++ .|.. +....|.+||||++|..+. .+++|
T Consensus 245 ~~~~~~~~~~~~~~sg~~d~~i~iwd~~-~~~--~~~~l-------~gH~-----~~V~~l~~spdg~~l~S~s-~D~~v 308 (318)
T 4ggc_A 245 SILWSPHYKELISGHGFAQNQLVIWKYP-TMA--KVAEL-------KGHT-----SRVLSLTMSPDGATVASAA-ADETL 308 (318)
T ss_dssp EEEEETTTTEEEEEECTTTCCEEEEETT-TCC--EEEEE-------CCCS-----SCEEEEEECTTSSCEEEEE-TTTEE
T ss_pred eeeecccccceEEEEEcCCCEEEEEECC-CCc--EEEEE-------cCCC-----CCEEEEEEcCCCCEEEEEe-cCCeE
Confidence 5688999999888764 46788888764 332 22222 1110 4468999999999997655 57899
Q ss_pred EEEEecC
Q 027522 83 RQYNIED 89 (222)
Q Consensus 83 ~vf~i~d 89 (222)
++|++.+
T Consensus 309 ~iWd~~~ 315 (318)
T 4ggc_A 309 RLWRCFE 315 (318)
T ss_dssp EEECCSC
T ss_pred EEEECCC
Confidence 9999954
No 282
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=93.81 E-value=0.77 Score=44.32 Aligned_cols=72 Identities=8% Similarity=0.024 Sum_probs=39.6
Q ss_pred EEEcCCCCeEEEEeccC----ceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCC
Q 027522 5 FLHDPSKDIGFVGCALA----STMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHG 80 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELs----stV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~ 80 (222)
++|+|||+.+|.+..-. ..|++.... ++.-+...+..-+. +.....+.+|||||+|+++.+.++
T Consensus 226 ~~WspDg~~l~y~~~d~~~~~~~v~~~~lg-t~~~~~~lv~~~~~-----------~~~~~~~~~SpDg~~l~~~~~~~~ 293 (751)
T 2xe4_A 226 IVWGPDHTSLFYVTKDETLRENKVWRHVMG-KLQSEDVCLYEEHN-----------PLFSAFMYKAADTNTLCIGSQSPE 293 (751)
T ss_dssp CEECSSTTEEEEEEECTTCCEEEEEEEETT-SCGGGCEEEEECCC-----------TTCEEEEEECTTSSEEEEEEECSS
T ss_pred EEEecCCCEEEEEEECCCCCCCEEEEEECC-CCchhcEEEEecCC-----------CceEEEEEECCCCCEEEEEecCCC
Confidence 67899997666655421 346655542 22111111211111 023468899999999998776543
Q ss_pred --cEEEEEec
Q 027522 81 --DIRQYNIE 88 (222)
Q Consensus 81 --sI~vf~i~ 88 (222)
.|.+++++
T Consensus 294 ~~~l~~~d~~ 303 (751)
T 2xe4_A 294 TAEVHLLDLR 303 (751)
T ss_dssp CEEEEEEESS
T ss_pred CceEEEEECC
Confidence 45555553
No 283
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=93.44 E-value=0.84 Score=42.48 Aligned_cols=69 Identities=16% Similarity=0.013 Sum_probs=38.9
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEE--EEcCCCCEEEEEeCCCCcE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDF--LISLDDRFLYFSNWLHGDI 82 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI--~iSpDgrfLYvSnRgh~sI 82 (222)
++|+|++ .+.+.+ .+++|.+|... ++.. ..+.. .+.. .....| ..|+||+.+.+|+-.+++|
T Consensus 272 v~~s~~~-~lasgs-~DgtV~lWD~~-~~~~-~~~~~-------~~H~-----~~V~sv~~~~s~~g~~~laS~S~D~tv 335 (524)
T 2j04_B 272 FDFLSPT-TVVCGF-KNGFVAEFDLT-DPEV-PSFYD-------QVHD-----SYILSVSTAYSDFEDTVVSTVAVDGYF 335 (524)
T ss_dssp EEESSSS-EEEEEE-TTSEEEEEETT-BCSS-CSEEE-------ECSS-----SCEEEEEEECCTTSCCEEEEEETTSEE
T ss_pred EEecCCC-eEEEEe-CCCEEEEEECC-CCCC-ceEEe-------eccc-----ccEEEEEEEcCCCCCeEEEEeccCCeE
Confidence 5677754 444443 47778777653 2211 01111 1110 335666 5688884555666678999
Q ss_pred EEEEecC
Q 027522 83 RQYNIED 89 (222)
Q Consensus 83 ~vf~i~d 89 (222)
++|++.+
T Consensus 336 klWD~~~ 342 (524)
T 2j04_B 336 YIFNPKD 342 (524)
T ss_dssp EEECGGG
T ss_pred EEEECCC
Confidence 9999854
No 284
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=93.06 E-value=1.7 Score=39.92 Aligned_cols=104 Identities=15% Similarity=0.252 Sum_probs=65.4
Q ss_pred ceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEc---CC----CCEEEEEeCCCCcEEEEEecCCCCCe
Q 027522 22 STMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLIS---LD----DRFLYFSNWLHGDIRQYNIEDPKNPV 94 (222)
Q Consensus 22 stV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iS---pD----grfLYvSnRgh~sI~vf~i~d~~~~~ 94 (222)
.+|.+|... ++..+..+++.+|+.-+... +...+|+|. |+ +.|+|++.-+...|.||++.....-+
T Consensus 123 pkLv~~DL~-t~~~~li~~y~~p~~~~~~~------S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swR 195 (381)
T 3q6k_A 123 PAIVAYDLK-QPNYPEVVRYYFPTRLVEKP------TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWN 195 (381)
T ss_dssp CEEEEEESS-STTCCEEEEEECCGGGCCCG------GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ceEEEEECC-CCCceeEEEEECCHHhcccC------CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEE
Confidence 457777764 34235678888876544332 567899998 33 78999999999999999995421111
Q ss_pred EEEEEEecceeecCCceeeeeCCCCCCCCC---CccccCccc--CCCCeeEEECCC----CCEEEEEe
Q 027522 95 LTGQIWVGGLFRKGSPVVAVTDDGQPYQSD---VPEVQGHRL--RGGPQMIQLSLD----GKRLYVTN 153 (222)
Q Consensus 95 L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~---~~~v~G~~~--~ggPr~~~lspd----Gk~LyvaN 153 (222)
+.- ..+ +|+ ...+.|+.+ ..|---|+|||+ +++||..-
T Consensus 196 ----v~~-~~~----------------~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~p 242 (381)
T 3q6k_A 196 ----VTH-PTF----------------KAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLA 242 (381)
T ss_dssp ----EEC-GGG----------------SCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEE
T ss_pred ----Ecc-CCC----------------ccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEE
Confidence 111 111 121 012345433 345667899999 89999773
No 285
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=92.75 E-value=0.27 Score=45.85 Aligned_cols=71 Identities=7% Similarity=-0.074 Sum_probs=41.4
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++|+|+++..++.+-.+.+|-+|... +++.. +++.- ...+ .....|..|||++.| ++.-..++|.+
T Consensus 316 ~~~s~~g~~~laS~S~D~tvklWD~~-~~~~~--~~~~~---~~~~-------~~v~~v~fsp~~~~l-~s~~~d~tv~l 381 (524)
T 2j04_B 316 TAYSDFEDTVVSTVAVDGYFYIFNPK-DIATT--KTTVS---RFRG-------SNLVPVVYCPQIYSY-IYSDGASSLRA 381 (524)
T ss_dssp EECCTTSCCEEEEEETTSEEEEECGG-GHHHH--CEEEE---ECSC-------CSCCCEEEETTTTEE-EEECSSSEEEE
T ss_pred EEcCCCCCeEEEEeccCCeEEEEECC-CCCcc--ccccc---cccc-------CcccceEeCCCcCeE-EEeCCCCcEEE
Confidence 35777774555555568888888653 22211 11110 0000 113568899999985 55546778999
Q ss_pred EEecC
Q 027522 85 YNIED 89 (222)
Q Consensus 85 f~i~d 89 (222)
|++..
T Consensus 382 wd~~~ 386 (524)
T 2j04_B 382 VPSRA 386 (524)
T ss_dssp EETTC
T ss_pred EECcc
Confidence 99854
No 286
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=92.11 E-value=2.2 Score=39.65 Aligned_cols=63 Identities=19% Similarity=0.275 Sum_probs=38.2
Q ss_pred EEEcCC---CCeEEEEec--c----------CceEEEEEeCCC--CC--ee-EEEEEEecCcccccccCCCCCCceeEEE
Q 027522 5 FLHDPS---KDIGFVGCA--L----------ASTMVRFSKTQD--GS--WN-HEVAISVKSLKVQNWILPEMPGLITDFL 64 (222)
Q Consensus 5 ~afhP~---g~~aYvv~E--L----------sstV~~~~~d~~--g~--~~-~~q~is~~p~~~~g~~~~~~~~~~adI~ 64 (222)
++|||+ ..++||..- - .+.|.+|.++.+ +. +. .+.++.+++.. +. -....|+
T Consensus 74 ia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~--~~------H~g~~l~ 145 (463)
T 2wg3_C 74 LAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELH--RK------HLGGQLL 145 (463)
T ss_dssp EEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESS--SS------SCEEEEE
T ss_pred eEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCC--Cc------ccCCcEe
Confidence 799997 578888742 1 146888887532 22 21 22333443221 11 2358999
Q ss_pred EcCCCCEEEEEe
Q 027522 65 ISLDDRFLYFSN 76 (222)
Q Consensus 65 iSpDgrfLYvSn 76 (222)
++||| +||++.
T Consensus 146 fgpDG-~LYv~~ 156 (463)
T 2wg3_C 146 FGPDG-FLYIIL 156 (463)
T ss_dssp ECTTS-CEEEEE
T ss_pred ECCCC-cEEEEe
Confidence 99999 799985
No 287
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=92.10 E-value=4.3 Score=38.34 Aligned_cols=30 Identities=23% Similarity=0.355 Sum_probs=20.6
Q ss_pred ceeEEEEcCCCCEE-EEEeCCC---CcEEEEEec
Q 027522 59 LITDFLISLDDRFL-YFSNWLH---GDIRQYNIE 88 (222)
Q Consensus 59 ~~adI~iSpDgrfL-YvSnRgh---~sI~vf~i~ 88 (222)
....+.+||||++| |++.++. -.|.+++++
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~ 163 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVE 163 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETT
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECC
Confidence 45788999999965 5555533 357777763
No 288
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=89.63 E-value=11 Score=34.38 Aligned_cols=79 Identities=13% Similarity=0.059 Sum_probs=41.4
Q ss_pred CCCCeEEEEeccCceEEEEEeCCCCCeeEEEEE--------EecCcc-c-------ccccCCCCCCceeEEEEcCC----
Q 027522 9 PSKDIGFVGCALASTMVRFSKTQDGSWNHEVAI--------SVKSLK-V-------QNWILPEMPGLITDFLISLD---- 68 (222)
Q Consensus 9 P~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~i--------s~~p~~-~-------~g~~~~~~~~~~adI~iSpD---- 68 (222)
+.++..-++.+-..+|..+.....-+|+...+. .+.+-+ . -|. +. -+....|.+|||
T Consensus 50 ~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~--~~~v~sla~spd~~~~ 126 (356)
T 2w18_A 50 AGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGN-LE--IREIRALFCSSDDESE 126 (356)
T ss_dssp ---CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECS-SS--EEEEEEECC------C
T ss_pred CCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeecc-cc--ccceEEEEECCCcccc
Confidence 456666677666688888877432245544333 333222 0 010 00 023578999999
Q ss_pred CCEEEEEeCCCCcEEEEEecCCCCCeEE
Q 027522 69 DRFLYFSNWLHGDIRQYNIEDPKNPVLT 96 (222)
Q Consensus 69 grfLYvSnRgh~sI~vf~i~d~~~~~L~ 96 (222)
+++|..+. ..++++.+. +++|+
T Consensus 127 ~~~l~s~g---~~~~v~~l~---~g~lv 148 (356)
T 2w18_A 127 KQVLLKSG---NIKAVLGLT---KRRLV 148 (356)
T ss_dssp CEEEEEEE---EEEEEEEET---TTEEE
T ss_pred ccEEEeCC---CeEEEEecC---CCcEE
Confidence 98887754 458899883 36663
No 289
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=88.85 E-value=6.7 Score=40.54 Aligned_cols=105 Identities=11% Similarity=0.085 Sum_probs=66.5
Q ss_pred cCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCC------CCEEEEEeCCCCcEEEEEecCCCCC
Q 027522 20 LASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLD------DRFLYFSNWLHGDIRQYNIEDPKNP 93 (222)
Q Consensus 20 LsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpD------grfLYvSnRgh~sI~vf~i~d~~~~ 93 (222)
.+++|..|..+ +|.+...+...+ +...+.+.+++. .+|+-|.+|..++|++|.+.+ .
T Consensus 530 ~g~~l~~fel~-~~~L~~~~~~~l-------------~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~---l 592 (1158)
T 3ei3_A 530 VGRALYYLQIH-PQELRQISHTEM-------------EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPS---F 592 (1158)
T ss_dssp ETTEEEEEEEE-TTEEEEEEEEEC-------------SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTT---C
T ss_pred ECCEEEEEEee-CCceeeecccCC-------------CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCC---C
Confidence 46677777665 355544333222 234577777753 489999999899999999943 4
Q ss_pred eEEEEEEecceeecCCceeeeeCCCCCCCCCCccccCcccCCCCeeEEECCCC--CEEEEEeCCCCccccccccccccCC
Q 027522 94 VLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDG--KRLYVTNSLFSAWDCQFYPELKEKG 171 (222)
Q Consensus 94 ~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~v~G~~~~ggPr~~~lspdG--k~LyvaNsl~~~wd~Q~yp~~~s~~ 171 (222)
..+....+++. . -||.+.+..-+ -+|+++- .+
T Consensus 593 ~~~~~~~L~~~--------------------------~----~p~si~l~~~~~~~~L~igl----------------~d 626 (1158)
T 3ei3_A 593 ELLHKEMLGGE--------------------------I----IPRSILMTTFESSHYLLCAL----------------GD 626 (1158)
T ss_dssp CEEEEEECCSS--------------------------C----CEEEEEEEEETTEEEEEEEE----------------TT
T ss_pred CeEEEEECCCC--------------------------C----CCcEEEEEEeCCCcEEEEEe----------------CC
Confidence 44433333211 1 27766654322 3666775 36
Q ss_pred cEEEEEEeeCCCCCee
Q 027522 172 SHMLQIDVNSEKGGMA 187 (222)
Q Consensus 172 ~~i~~~dvd~~~G~l~ 187 (222)
+.++++.+|+.+|.|.
T Consensus 627 G~l~~~~~d~~tg~l~ 642 (1158)
T 3ei3_A 627 GALFYFGLNIETGLLS 642 (1158)
T ss_dssp SEEEEEEECTTTCCEE
T ss_pred CeEEEEEEcCCCCccc
Confidence 7788888999999985
No 290
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=88.76 E-value=12 Score=35.85 Aligned_cols=88 Identities=11% Similarity=0.139 Sum_probs=47.1
Q ss_pred eEEEcCCCCeEEEEeccC------------------ceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEE
Q 027522 4 RFLHDPSKDIGFVGCALA------------------STMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLI 65 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELs------------------stV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~i 65 (222)
.++|+|++..+|+...-. ++|..+.. .+|+.... ..+.+.+ .|... .++.+.-+-+
T Consensus 247 ~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~-~TG~~~W~--~~~~~~d--~wd~~-~~~~p~l~~~ 320 (677)
T 1kb0_A 247 SMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDP-DTGKYKWH--YQETPGD--NWDYT-STQPMILADI 320 (677)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECT-TTCCEEEE--EESSTTC--CSCCC-CCSCCEEEEE
T ss_pred ceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEEC-CCCCEEEE--EecCCCc--ccccc-cCCCcEEEec
Confidence 368999999999987532 24666654 35653322 2333321 11111 0122222233
Q ss_pred cCCC---CEEEEEeCCCCcEEEEEecCCCCCeEEEEEEe
Q 027522 66 SLDD---RFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWV 101 (222)
Q Consensus 66 SpDg---rfLYvSnRgh~sI~vf~i~d~~~~~L~~~v~~ 101 (222)
..|| +.||+..+ .+.|.++|. .+++++.++..
T Consensus 321 ~~dG~~~~~l~~~~~-~G~l~~lD~---~tG~~l~~~~~ 355 (677)
T 1kb0_A 321 KIAGKPRKVILHAPK-NGFFFVLDR---TNGKFISAKNF 355 (677)
T ss_dssp EETTEEEEEEEECCT-TSEEEEEET---TTCCEEEEEES
T ss_pred ccCCcEeeEEEEECC-CCEEEEEEC---CCCCEeccccc
Confidence 3488 56776664 566777754 45777666554
No 291
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=87.49 E-value=7 Score=36.64 Aligned_cols=16 Identities=19% Similarity=-0.060 Sum_probs=13.4
Q ss_pred EEEEcCCCCEEEEEeC
Q 027522 62 DFLISLDDRFLYFSNW 77 (222)
Q Consensus 62 dI~iSpDgrfLYvSnR 77 (222)
.+.++|+.+.||+.+.
T Consensus 390 ~~a~dp~~g~~yv~~~ 405 (571)
T 2ad6_A 390 VDSYDPESRTLYAGLN 405 (571)
T ss_dssp BCEEETTTTEEEEEEE
T ss_pred CceECCCCCEEEEEch
Confidence 4678999999999863
No 292
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=86.93 E-value=17 Score=33.97 Aligned_cols=89 Identities=13% Similarity=0.093 Sum_probs=45.4
Q ss_pred EEEcCCCCeEEEEecc---------------CceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCC
Q 027522 5 FLHDPSKDIGFVGCAL---------------ASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDD 69 (222)
Q Consensus 5 ~afhP~g~~aYvv~EL---------------sstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDg 69 (222)
++++|+...+|+.+.- +++|..+..+ +|+..-. ..+.+.+ .|... ..+.+.-+-...||
T Consensus 240 ~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~-tG~~~W~--~~~~~~d--~~d~~-~~~~p~l~~~~~~G 313 (571)
T 2ad6_A 240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLD-TGMAKWG--YQKTPHD--EWDFA-GVNQMVLTDQPVNG 313 (571)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETT-TCCEEEE--EESSTTC--SSCCC-CCCCCEEEEEEETT
T ss_pred EEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecC-CCcEEEE--ecCCCCc--ccccc-cCCCCEEEecccCC
Confidence 4678888899998752 2467777653 5653322 2222211 11110 00122222333688
Q ss_pred C---EEEEEeCCCCcEEEEEecCCCCCeEEEEEEecc
Q 027522 70 R---FLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGG 103 (222)
Q Consensus 70 r---fLYvSnRgh~sI~vf~i~d~~~~~L~~~v~~gG 103 (222)
+ .||+.++ .+.+.+++. .+++++-++..++
T Consensus 314 ~~~~~v~~~~~-~G~l~~lD~---~tG~~~w~~~~~~ 346 (571)
T 2ad6_A 314 KMTPLLSHIDR-NGILYTLNR---ENGNLIVAEKVDP 346 (571)
T ss_dssp EEEEEEEEECT-TSEEEEEET---TTCCEEEEEESST
T ss_pred cEEEEEEEeCC-CcEEEEEEC---CCCCEEeeecccC
Confidence 5 4556554 455555543 4577776666543
No 293
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=83.71 E-value=20 Score=30.74 Aligned_cols=27 Identities=15% Similarity=0.298 Sum_probs=19.8
Q ss_pred eeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 027522 60 ITDFLISLDDRFLYFSNWLHGDIRQYNIED 89 (222)
Q Consensus 60 ~adI~iSpDgrfLYvSnRgh~sI~vf~i~d 89 (222)
...|.. |+++|+++.. .+.|.+|++..
T Consensus 259 v~~~~~--~~~~l~s~~~-dg~i~vwd~~~ 285 (435)
T 1p22_A 259 VNVVDF--DDKYIVSASG-DRTIKVWNTST 285 (435)
T ss_dssp EEEEEE--ETTEEEEEET-TSEEEEEETTT
T ss_pred EEEEEe--CCCEEEEEeC-CCeEEEEECCc
Confidence 344444 8999987774 78899999843
No 294
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=82.58 E-value=19 Score=34.30 Aligned_cols=15 Identities=7% Similarity=0.268 Sum_probs=12.8
Q ss_pred EEEEcCCCCEEEEEe
Q 027522 62 DFLISLDDRFLYFSN 76 (222)
Q Consensus 62 dI~iSpDgrfLYvSn 76 (222)
.+.+||+++.||+..
T Consensus 397 ~~a~dp~~~~~yv~~ 411 (677)
T 1kb0_A 397 PMSFNPQTGLVYLPA 411 (677)
T ss_dssp CCEEETTTTEEEEEE
T ss_pred CceEcCCCCEEEEeC
Confidence 578899999999964
No 295
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=82.35 E-value=27 Score=31.79 Aligned_cols=30 Identities=7% Similarity=0.221 Sum_probs=23.8
Q ss_pred eeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 027522 60 ITDFLISLDDRFLYFSNWLHGDIRQYNIED 89 (222)
Q Consensus 60 ~adI~iSpDgrfLYvSnRgh~sI~vf~i~d 89 (222)
+..+.+.+..-.||++.-.++.|.+|+...
T Consensus 277 ~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 277 AIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred cceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 456777655568999999999999998753
No 296
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=82.17 E-value=6.6 Score=38.30 Aligned_cols=64 Identities=22% Similarity=0.236 Sum_probs=40.9
Q ss_pred CceeEEEEcCCCCEEEE-EeC---------CCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCCCcc
Q 027522 58 GLITDFLISLDDRFLYF-SNW---------LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPE 127 (222)
Q Consensus 58 ~~~adI~iSpDgrfLYv-SnR---------gh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~~~~ 127 (222)
+.+=+|.++++|+ ||+ +-- +++.=.+|.+ ++.++++..-+ .+ |
T Consensus 476 nsPDnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~-dp~tGel~~fl-~~--------------------P---- 528 (592)
T 4a9v_A 476 NSPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCA-DPATGEIRRFM-VG--------------------P---- 528 (592)
T ss_dssp CCEEEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEE-CTTTCCEEEEE-EC--------------------C----
T ss_pred CCCCceEECCCCC-EEEEeCCCcCccccccccCCceEEEE-eCCCCeEEEEE-eC--------------------C----
Confidence 5677999999996 566 432 1222256666 45556552222 11 0
Q ss_pred ccCcccCCCCeeEEECCCCCEEEEEe
Q 027522 128 VQGHRLRGGPQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 128 v~G~~~~ggPr~~~lspdGk~LyvaN 153 (222)
.|.. |.-+++|||+|+|||+.
T Consensus 529 -~~aE----pnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 529 -IGCE----VTGISFSPDQKTLFVGI 549 (592)
T ss_dssp -TTCE----EEEEEECTTSSEEEEEE
T ss_pred -CCcc----ccCCEECCCCCEEEEEE
Confidence 1233 78899999999999998
No 297
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=81.85 E-value=24 Score=30.23 Aligned_cols=66 Identities=12% Similarity=0.085 Sum_probs=41.0
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
.+++++++++++..+ +.+|.+|... +++. ... +. .. . .....+.++ +++|+++. ..+.|.+
T Consensus 123 ~~~~~~g~~l~sg~~-dg~i~vwd~~-~~~~--~~~--~~-~h-~--------~~v~~~~~~--~~~l~s~~-~dg~i~v 183 (445)
T 2ovr_B 123 TCLQFCGNRIVSGSD-DNTLKVWSAV-TGKC--LRT--LV-GH-T--------GGVWSSQMR--DNIIISGS-TDRTLKV 183 (445)
T ss_dssp EEEEEETTEEEEEET-TSCEEEEETT-TCCE--EEE--CC-CC-S--------SCEEEEEEE--TTEEEEEE-TTSCEEE
T ss_pred EEEEEcCCEEEEEEC-CCcEEEEECC-CCcE--EEE--Ec-CC-C--------CCEEEEEec--CCEEEEEe-CCCeEEE
Confidence 456777888887776 7888888764 3332 222 11 11 1 334666666 56666555 5789999
Q ss_pred EEecC
Q 027522 85 YNIED 89 (222)
Q Consensus 85 f~i~d 89 (222)
|++..
T Consensus 184 wd~~~ 188 (445)
T 2ovr_B 184 WNAET 188 (445)
T ss_dssp EETTT
T ss_pred EECCc
Confidence 99843
No 298
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=78.66 E-value=18 Score=29.13 Aligned_cols=23 Identities=22% Similarity=0.390 Sum_probs=16.4
Q ss_pred eeEEEEcCCCCEEEEEeCCCCcEEEEE
Q 027522 60 ITDFLISLDDRFLYFSNWLHGDIRQYN 86 (222)
Q Consensus 60 ~adI~iSpDgrfLYvSnRgh~sI~vf~ 86 (222)
...+.+.++|+ ||+++ +.|..|+
T Consensus 179 ~~~~~~d~~g~-l~v~t---~~l~~~d 201 (330)
T 3hxj_A 179 TSAASIGKDGT-IYFGS---DKVYAIN 201 (330)
T ss_dssp CSCCEECTTCC-EEEES---SSEEEEC
T ss_pred eeeeEEcCCCE-EEEEe---CEEEEEC
Confidence 35677778887 77777 6677775
No 299
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=77.56 E-value=37 Score=30.63 Aligned_cols=63 Identities=5% Similarity=-0.041 Sum_probs=36.7
Q ss_pred EEEcCCCCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 5 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
++| +++++||. -++.|.+|.-..-. ....+.... ....+|+..+.. ++.....|+|.+
T Consensus 93 l~f--d~~~L~v~--~~~~l~v~dv~sl~---~~~~~~~~~------------~~v~~i~~~~p~---~av~~~dG~L~v 150 (388)
T 1xip_A 93 VCF--HGDQVLVS--TRNALYSLDLEELS---EFRTVTSFE------------KPVFQLKNVNNT---LVILNSVNDLSA 150 (388)
T ss_dssp EEE--ETTEEEEE--ESSEEEEEESSSTT---CEEEEEECS------------SCEEEEEECSSE---EEEEETTSEEEE
T ss_pred EEE--CCCEEEEE--cCCcEEEEEchhhh---ccCccceee------------cceeeEEecCCC---EEEEECCCCEEE
Confidence 567 99999998 45788888754211 112222111 112456555543 333346799999
Q ss_pred EEecC
Q 027522 85 YNIED 89 (222)
Q Consensus 85 f~i~d 89 (222)
|++.+
T Consensus 151 ~dl~~ 155 (388)
T 1xip_A 151 LDLRT 155 (388)
T ss_dssp EETTT
T ss_pred EEccC
Confidence 99954
No 300
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=77.20 E-value=34 Score=29.29 Aligned_cols=27 Identities=4% Similarity=0.202 Sum_probs=18.4
Q ss_pred eeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 027522 60 ITDFLISLDDRFLYFSNWLHGDIRQYNIED 89 (222)
Q Consensus 60 ~adI~iSpDgrfLYvSnRgh~sI~vf~i~d 89 (222)
...+.++ +.+|+++. ..+.|.+|++..
T Consensus 216 v~~l~~~--~~~l~s~s-~dg~i~vwd~~~ 242 (435)
T 1p22_A 216 VLHLRFN--NGMMVTCS-KDRSIAVWDMAS 242 (435)
T ss_dssp EEEEECC--TTEEEEEE-TTSCEEEEECSS
T ss_pred EEEEEEc--CCEEEEee-CCCcEEEEeCCC
Confidence 4566665 45665555 578999999965
No 301
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=74.11 E-value=47 Score=29.95 Aligned_cols=66 Identities=11% Similarity=0.087 Sum_probs=43.3
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeC--------CCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEE
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKT--------QDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFS 75 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d--------~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvS 75 (222)
.|+.++.....|+.+. ..+.++..+ ..+.++....+. +|. ++.+.+ |+++|||+
T Consensus 42 lLais~~~gll~a~~~--~~l~v~~~~~l~~~~~~~~~~~~~~~~~~-------------lp~-V~~l~f--d~~~L~v~ 103 (388)
T 1xip_A 42 NLDISNSKSLFVAASG--SKAVVGELQLLRDHITSDSTPLTFKWEKE-------------IPD-VIFVCF--HGDQVLVS 103 (388)
T ss_dssp CEEEETTTTEEEEEET--TEEEEEEHHHHHHHHHSSSCCCCCSEEEE-------------CTT-EEEEEE--ETTEEEEE
T ss_pred EEEEcCCCCEEEEeCC--CEEEEEEhhHhhhhhccccccccceEEee-------------CCC-eeEEEE--CCCEEEEE
Confidence 4788899999888876 456565431 111122111112 335 789999 99999999
Q ss_pred eCCCCcEEEEEecC
Q 027522 76 NWLHGDIRQYNIED 89 (222)
Q Consensus 76 nRgh~sI~vf~i~d 89 (222)
+ .+.|.+|++..
T Consensus 104 ~--~~~l~v~dv~s 115 (388)
T 1xip_A 104 T--RNALYSLDLEE 115 (388)
T ss_dssp E--SSEEEEEESSS
T ss_pred c--CCcEEEEEchh
Confidence 4 36899999854
No 302
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=69.92 E-value=9.5 Score=36.88 Aligned_cols=19 Identities=11% Similarity=-0.088 Sum_probs=14.9
Q ss_pred ceeEEEEcCCCCEEEEEeCC
Q 027522 59 LITDFLISLDDRFLYFSNWL 78 (222)
Q Consensus 59 ~~adI~iSpDgrfLYvSnRg 78 (222)
.+=-|.++|+|+ ||++-=+
T Consensus 477 ~PDNL~fd~~G~-LwI~eDg 495 (592)
T 3zwu_A 477 SPDGLGFDKAGR-LWILTDG 495 (592)
T ss_dssp CEEEEEECTTCC-EEEEECC
T ss_pred CCcceEECCCCC-EEEEecC
Confidence 456799999999 8887643
No 303
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=69.39 E-value=13 Score=36.30 Aligned_cols=23 Identities=22% Similarity=0.212 Sum_probs=18.5
Q ss_pred CceeEEEEcCCCCEEEEEeCCCC
Q 027522 58 GLITDFLISLDDRFLYFSNWLHG 80 (222)
Q Consensus 58 ~~~adI~iSpDgrfLYvSnRgh~ 80 (222)
..++.|.+|||+|.|||+.---+
T Consensus 531 aEpnGiafSPD~ktLfV~vQHPG 553 (592)
T 4a9v_A 531 CEVTGISFSPDQKTLFVGIQHPG 553 (592)
T ss_dssp CEEEEEEECTTSSEEEEEEESTT
T ss_pred ccccCCEECCCCCEEEEEEeCCC
Confidence 34689999999999999965333
No 304
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=69.15 E-value=43 Score=26.87 Aligned_cols=24 Identities=25% Similarity=0.393 Sum_probs=15.3
Q ss_pred eeEEEEcCCCCEEEEEeCCCCcEEEE
Q 027522 60 ITDFLISLDDRFLYFSNWLHGDIRQY 85 (222)
Q Consensus 60 ~adI~iSpDgrfLYvSnRgh~sI~vf 85 (222)
...+.+++||+ ||++.. .+.|..|
T Consensus 217 ~~~~~~~~~g~-l~v~t~-~~gl~~~ 240 (330)
T 3hxj_A 217 VTRPAISEDGT-IYVTSL-DGHLYAI 240 (330)
T ss_dssp CSCCEECTTSC-EEEEET-TTEEEEE
T ss_pred eeceEECCCCe-EEEEcC-CCeEEEE
Confidence 46677888874 677665 3456655
No 305
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=58.90 E-value=33 Score=33.13 Aligned_cols=19 Identities=21% Similarity=0.240 Sum_probs=16.6
Q ss_pred CceeEEEEcCCCCEEEEEe
Q 027522 58 GLITDFLISLDDRFLYFSN 76 (222)
Q Consensus 58 ~~~adI~iSpDgrfLYvSn 76 (222)
+..+.+.+|||+|.|||+-
T Consensus 531 aE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 531 CEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEEECTTSSEEEEEE
T ss_pred ccCcCeeECCCCCEEEEEE
Confidence 4568999999999999984
No 306
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=58.75 E-value=1.2e+02 Score=28.57 Aligned_cols=86 Identities=17% Similarity=0.223 Sum_probs=43.6
Q ss_pred EEEcCCCCeEEEEeccC------------------ceEEEEEeCCCCCeeEEEEEEecCcccccccCC-CCCCceeEEEE
Q 027522 5 FLHDPSKDIGFVGCALA------------------STMVRFSKTQDGSWNHEVAISVKSLKVQNWILP-EMPGLITDFLI 65 (222)
Q Consensus 5 ~afhP~g~~aYvv~ELs------------------stV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~-~~~~~~adI~i 65 (222)
.+++|+...+|+...-. ++|..+.. .+|+..-.. .+.+.+ .|... ..|...+++.+
T Consensus 235 ~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~-~tG~~~W~~--~~~~~~--~wd~~~~~~~~~~d~~~ 309 (668)
T 1kv9_A 235 MAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRP-DTGKLAWHY--QVTPGD--SWDFTATQQITLAELNI 309 (668)
T ss_dssp EEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECT-TTCCEEEEE--ESSTTC--CSCCCCCSCEEEEEEEE
T ss_pred eEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcC-CCCceeeEe--ecCCCc--cccccCCCCcEEEEecc
Confidence 57889999999987532 24666654 356543332 222221 12111 01122344443
Q ss_pred cCCCC---EEEEEeCCCCcEEEEEecCCCCCeEEEEEEe
Q 027522 66 SLDDR---FLYFSNWLHGDIRQYNIEDPKNPVLTGQIWV 101 (222)
Q Consensus 66 SpDgr---fLYvSnRgh~sI~vf~i~d~~~~~L~~~v~~ 101 (222)
||+ .||+..+ .+.+.+++. .+++++.++..
T Consensus 310 --~G~~~~~v~~~~~-~G~l~~lD~---~tG~~l~~~~~ 342 (668)
T 1kv9_A 310 --DGKPRKVLMQAPK-NGFFYVLDR---TNGKLISAEKF 342 (668)
T ss_dssp --TTEEEEEEEECCT-TSEEEEEET---TTCCEEEEEES
T ss_pred --CCcEEEEEEEECC-CCEEEEEEC---CCCCEeccccc
Confidence 675 5666554 455555543 44666655443
No 307
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=58.13 E-value=86 Score=29.82 Aligned_cols=34 Identities=9% Similarity=0.088 Sum_probs=23.9
Q ss_pred EEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEe
Q 027522 64 LISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWV 101 (222)
Q Consensus 64 ~iSpDgrfLYvSnRgh~sI~vf~i~d~~~~~L~~~v~~ 101 (222)
.++..|..||+.+ ..+.|+.||.. +++++-+..+
T Consensus 481 ~~~tagglvf~gt-~dg~l~a~D~~---tG~~lw~~~~ 514 (689)
T 1yiq_A 481 TLSTAGNLVFEGS-ADGRVIAYAAD---TGEKLWEQPA 514 (689)
T ss_dssp EEEETTTEEEEEC-TTSEEEEEETT---TCCEEEEEEC
T ss_pred cceECCCEEEEEC-CCCcEEEEECC---CCccceeeeC
Confidence 4566788888875 57889999763 4777655555
No 308
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=55.91 E-value=1.3e+02 Score=28.03 Aligned_cols=16 Identities=25% Similarity=0.303 Sum_probs=13.4
Q ss_pred eeEEECCCCCEEEEEe
Q 027522 138 QMIQLSLDGKRLYVTN 153 (222)
Q Consensus 138 r~~~lspdGk~LyvaN 153 (222)
..++++|+.+.+||..
T Consensus 415 ~~~a~dp~~g~~yv~~ 430 (582)
T 1flg_A 415 NPMAYSQDTGLFYVPA 430 (582)
T ss_dssp SCCEECTTTCCEEEEE
T ss_pred CCceECCCCCEEEEec
Confidence 4689999999999874
No 309
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=50.57 E-value=1.1e+02 Score=25.46 Aligned_cols=19 Identities=5% Similarity=0.389 Sum_probs=12.8
Q ss_pred CCCEEEEEeCCCCcEEEEEe
Q 027522 68 DDRFLYFSNWLHGDIRQYNI 87 (222)
Q Consensus 68 DgrfLYvSnRgh~sI~vf~i 87 (222)
++..||+... .+.|..++.
T Consensus 238 ~~~~v~~~~~-~g~l~~~d~ 256 (376)
T 3q7m_A 238 VNGVVFALAY-NGNLTALDL 256 (376)
T ss_dssp ETTEEEEECT-TSCEEEEET
T ss_pred ECCEEEEEec-CcEEEEEEC
Confidence 3677888764 456777765
No 310
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=49.75 E-value=38 Score=29.35 Aligned_cols=70 Identities=13% Similarity=0.282 Sum_probs=40.0
Q ss_pred eEEEcCCCCeEEEEeccCceEEEEEeCC--CCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCc
Q 027522 4 RFLHDPSKDIGFVGCALASTMVRFSKTQ--DGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGD 81 (222)
Q Consensus 4 r~afhP~g~~aYvv~ELsstV~~~~~d~--~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~s 81 (222)
.|+|||+|. +|++ -+..++...... ...|... ...+-. .||. .=-++.+.|+|. ||++ ..+
T Consensus 45 ~laf~P~G~-LYaV--~~G~Ly~~~~~t~~~~~W~~s-~t~IG~---~Gw~------~F~a~~fD~~G~-LYav--~dG- 107 (236)
T 1tl2_A 45 FLFLSPGGE-LYGV--LNDKIYKGTPPTHDNDNWMGR-AKKIGN---GGWN------QFQFLFFDPNGY-LYAV--SKD- 107 (236)
T ss_dssp EEEECTTSC-EEEE--ETTEEEEESCCCSTTCCHHHH-CEEEEC---SCGG------GCSEEEECTTSC-EEEE--ETT-
T ss_pred eEEECCCcc-EEEE--eCCeEEEECCCCCCccccccc-ccEecc---cccc------cceEEEECCCCC-EEEe--CCC-
Confidence 589999887 9999 556777665421 1233222 112211 1342 226788888886 5666 235
Q ss_pred EEEEEecCCC
Q 027522 82 IRQYNIEDPK 91 (222)
Q Consensus 82 I~vf~i~d~~ 91 (222)
.+|+++.|.
T Consensus 108 -~iyr~~pP~ 116 (236)
T 1tl2_A 108 -KLYKASPPQ 116 (236)
T ss_dssp -EEEEESCCC
T ss_pred -EEEEeCCCc
Confidence 457776543
No 311
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=47.84 E-value=28 Score=30.17 Aligned_cols=61 Identities=11% Similarity=0.192 Sum_probs=34.3
Q ss_pred CCCCeEEEEeccCceEEEEEeC--CCCCe--eEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 027522 9 PSKDIGFVGCALASTMVRFSKT--QDGSW--NHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQ 84 (222)
Q Consensus 9 P~g~~aYvv~ELsstV~~~~~d--~~g~~--~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~v 84 (222)
|....+|++.| + +|.+=... .+..| .+.+ +-. .|| ....+|.++|||+ ||+- ..+. .
T Consensus 2 ~~~~~l~~v~~-d-~~y~G~~P~~~~~~~~~~a~~---iG~---~gw------~~~~~laf~P~G~-LYaV--~~G~--L 62 (236)
T 1tl2_A 2 GGESMLRGVYQ-D-KFYQGTYPQNKNDNWLARATL---IGK---GGW------SNFKFLFLSPGGE-LYGV--LNDK--I 62 (236)
T ss_dssp CCCCCEEEEET-T-EEEEESCCCSTTCCHHHHSEE---EES---SSC------TTCSEEEECTTSC-EEEE--ETTE--E
T ss_pred CcceEEEEEeC-C-cEEecCCCCCcccchhhhccc---cCc---ccc------ccceeEEECCCcc-EEEE--eCCe--E
Confidence 44567888888 4 65444331 12234 2222 111 234 3447999999888 9987 3455 5
Q ss_pred EEec
Q 027522 85 YNIE 88 (222)
Q Consensus 85 f~i~ 88 (222)
|.++
T Consensus 63 y~~~ 66 (236)
T 1tl2_A 63 YKGT 66 (236)
T ss_dssp EEES
T ss_pred EEEC
Confidence 6664
No 312
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=42.37 E-value=86 Score=29.85 Aligned_cols=13 Identities=15% Similarity=0.363 Sum_probs=11.9
Q ss_pred EEEcCCCCEEEEE
Q 027522 63 FLISLDDRFLYFS 75 (222)
Q Consensus 63 I~iSpDgrfLYvS 75 (222)
+.+||+.+.||+.
T Consensus 394 ~a~dp~~~~~yv~ 406 (689)
T 1yiq_A 394 MSYNPDTGLVYIP 406 (689)
T ss_dssp CEEETTTTEEEEE
T ss_pred ceECCCCCEEEEe
Confidence 7899999999986
No 313
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=35.83 E-value=2.8e+02 Score=26.05 Aligned_cols=15 Identities=7% Similarity=0.231 Sum_probs=12.4
Q ss_pred EEEEcCCCCEEEEEe
Q 027522 62 DFLISLDDRFLYFSN 76 (222)
Q Consensus 62 dI~iSpDgrfLYvSn 76 (222)
.+.++|+.+.+||..
T Consensus 385 ~~a~dp~~g~~yv~~ 399 (668)
T 1kv9_A 385 SMSFNPGTGLVYIPY 399 (668)
T ss_dssp CCEEETTTTEEEEEE
T ss_pred cceECCCCCEEEEec
Confidence 378999999999853
No 314
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=34.23 E-value=2e+02 Score=24.03 Aligned_cols=24 Identities=25% Similarity=0.535 Sum_probs=14.5
Q ss_pred CeeEEECCCCCEEEEE--eCCCCccc
Q 027522 137 PQMIQLSLDGKRLYVT--NSLFSAWD 160 (222)
Q Consensus 137 Pr~~~lspdGk~Lyva--Nsl~~~wd 160 (222)
...++++++|+.++++ ..+|..+|
T Consensus 165 ~~~~~~~~~~~~~~~g~~G~~~~S~d 190 (327)
T 2xbg_A 165 MRNLNRSPSGEYVAVSSRGSFYSTWE 190 (327)
T ss_dssp EEEEEECTTSCEEEEETTSSEEEEEC
T ss_pred eEEEEEcCCCcEEEEECCCcEEEEeC
Confidence 3456778888776665 23555444
No 315
>2jzk_A Cyanovirin-N homolog; CVNH, antiviral protein, carbohydrate binding protein; NMR {Tuber borchii}
Probab=32.13 E-value=1.5e+02 Score=21.90 Aligned_cols=56 Identities=14% Similarity=0.296 Sum_probs=33.7
Q ss_pred CeeEEECCCCCEEEEEeCCCCccccccccccccCCcEEEE-EEeeC----CCCCeeeccceeEecCCCCCCCcceeeeec
Q 027522 137 PQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQ-IDVNS----EKGGMAINPNFFVDFEAEPDGPALAHEMRY 211 (222)
Q Consensus 137 Pr~~~lspdGk~LyvaNsl~~~wd~Q~yp~~~s~~~~i~~-~dvd~----~~G~l~~~~~f~vdf~~~~~g~~~~h~~r~ 211 (222)
-|++.|..+|.+|.+-. +. .++..+.. +|.|. .+|.|+-.. -+|.. -|+++++
T Consensus 10 c~~i~l~~~g~~L~A~C--------~~-----~~G~~~~s~idLn~~igN~nG~l~~~~---~nFs~------Sc~~i~l 67 (106)
T 2jzk_A 10 SRNAVLTNGGRTLRAEC--------RN-----ADGNWVTSELDLDTCIGNPNGFLGWGM---QNFSH------SSEDIKL 67 (106)
T ss_dssp EEEEEEETTTTEEEEEE--------EC-----TTSCEEEEEEEGGGTEECTTSCCEESS---CCGGG------GEEEEEE
T ss_pred cCCeEEECCCcEEEEEE--------EC-----CCCCEEEeEEEhHHhccccCCEEEECC---CCccc------cccceEE
Confidence 57888877899998887 54 45655544 66653 456665311 12322 5666666
Q ss_pred CCC
Q 027522 212 PGG 214 (222)
Q Consensus 212 ~~g 214 (222)
.|+
T Consensus 68 eg~ 70 (106)
T 2jzk_A 68 EEG 70 (106)
T ss_dssp SST
T ss_pred eCC
Confidence 654
No 316
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=31.44 E-value=2.1e+02 Score=26.68 Aligned_cols=16 Identities=19% Similarity=0.246 Sum_probs=12.3
Q ss_pred EEEEcCCCCEEEEEeC
Q 027522 62 DFLISLDDRFLYFSNW 77 (222)
Q Consensus 62 dI~iSpDgrfLYvSnR 77 (222)
.+.++|+...+|+...
T Consensus 416 ~~a~dp~~g~~yv~~~ 431 (582)
T 1flg_A 416 PMAYSQDTGLFYVPAN 431 (582)
T ss_dssp CCEECTTTCCEEEEEE
T ss_pred CceECCCCCEEEEech
Confidence 4578899999998753
No 317
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=31.34 E-value=2.2e+02 Score=23.48 Aligned_cols=79 Identities=14% Similarity=0.113 Sum_probs=37.2
Q ss_pred CCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCC
Q 027522 11 KDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDP 90 (222)
Q Consensus 11 g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSpDgrfLYvSnRgh~sI~vf~i~d~ 90 (222)
+..+|+.+. +..|..+.. ++|+..... .+........... ....+. +..++..||+... .+.|..|+.
T Consensus 53 ~~~v~~~~~-~g~v~a~d~-~tG~~~W~~--~~~~~~~~~~~~~--~~~~~~--~~~~~~~v~v~~~-~g~l~a~d~--- 120 (376)
T 3q7m_A 53 DNVVYAADR-AGLVKALNA-DDGKEIWSV--SLAEKDGWFSKEP--ALLSGG--VTVSGGHVYIGSE-KAQVYALNT--- 120 (376)
T ss_dssp TTEEEEECT-TSEEEEEET-TTCCEEEEE--ECCC---CCSCCC--CCEEEE--EEEETTEEEEEET-TSEEEEEET---
T ss_pred CCEEEEEcC-CCeEEEEEc-cCCceeeee--cCccccccccccC--cccccC--ceEeCCEEEEEcC-CCEEEEEEC---
Confidence 567888765 457777765 356543222 2221100000000 011122 2335678888874 456777755
Q ss_pred CCCeEEEEEEe
Q 027522 91 KNPVLTGQIWV 101 (222)
Q Consensus 91 ~~~~L~~~v~~ 101 (222)
.++++.=+...
T Consensus 121 ~tG~~~W~~~~ 131 (376)
T 3q7m_A 121 SDGTVAWQTKV 131 (376)
T ss_dssp TTCCEEEEEEC
T ss_pred CCCCEEEEEeC
Confidence 34655433443
No 318
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=31.29 E-value=36 Score=29.29 Aligned_cols=13 Identities=23% Similarity=0.549 Sum_probs=7.9
Q ss_pred cEEEEEEeeCCCCCe
Q 027522 172 SHMLQIDVNSEKGGM 186 (222)
Q Consensus 172 ~~i~~~dvd~~~G~l 186 (222)
..++.+ |..+|++
T Consensus 183 g~v~a~--d~~tG~~ 195 (369)
T 2hz6_A 183 GLVVTV--DSESGDV 195 (369)
T ss_dssp CEEEEE--CTTTCCE
T ss_pred CEEEEE--ECCCCcE
Confidence 456656 4467765
No 319
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=30.50 E-value=3.5e+02 Score=25.48 Aligned_cols=17 Identities=0% Similarity=-0.087 Sum_probs=14.7
Q ss_pred CeeEEECCCCCEEEEEe
Q 027522 137 PQMIQLSLDGKRLYVTN 153 (222)
Q Consensus 137 Pr~~~lspdGk~LyvaN 153 (222)
...+++||+.+.|||..
T Consensus 395 w~~~a~dp~~~~~yv~~ 411 (599)
T 1w6s_A 395 QGHDSYDPKRELFFMGI 411 (599)
T ss_dssp SCBCEEETTTTEEEEEE
T ss_pred CCCccCCCCCCEEEEec
Confidence 66789999999999864
No 320
>2jzj_A Cyanovirin-N homolog; CVNH, antiviral protein, carbohydrate binding protein; NMR {Ceratopteris richardii}
Probab=29.12 E-value=2e+02 Score=22.14 Aligned_cols=19 Identities=11% Similarity=-0.204 Sum_probs=15.3
Q ss_pred CceeEEEEcCCCCEEEEEeCC
Q 027522 58 GLITDFLISLDDRFLYFSNWL 78 (222)
Q Consensus 58 ~~~adI~iSpDgrfLYvSnRg 78 (222)
..+.+|.|. |.+|.+.|+.
T Consensus 7 ~Sc~dI~l~--g~~L~A~C~~ 25 (124)
T 2jzj_A 7 NSCTGVELY--GYILRGDCIN 25 (124)
T ss_dssp GSEEEEEEE--TTEEEEEEEC
T ss_pred hhcCCcEEE--CCEEEEEEEC
Confidence 457899985 6999999984
No 321
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=28.47 E-value=3.8e+02 Score=25.23 Aligned_cols=47 Identities=9% Similarity=0.162 Sum_probs=28.3
Q ss_pred eEEECCCCCEEEEEeCCCCccccccccccccCCcEEEEEEeeCCCCCee
Q 027522 139 MIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 187 (222)
Q Consensus 139 ~~~lspdGk~LyvaNsl~~~wd~Q~yp~~~s~~~~i~~~dvd~~~G~l~ 187 (222)
.++++++...||+...=-++|....-|..-.-...|+.+ |++||++.
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Al--d~~TG~~~ 291 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGR--DADTGEAK 291 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEE--ETTTCCEE
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEE--eCCCCcee
Confidence 468889999999986433445544322211113567777 55788874
No 322
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=26.07 E-value=3.1e+02 Score=25.75 Aligned_cols=83 Identities=12% Similarity=0.107 Sum_probs=50.1
Q ss_pred eeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCCC----CccccCcccCC
Q 027522 60 ITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSD----VPEVQGHRLRG 135 (222)
Q Consensus 60 ~adI~iSpDgrfLYvSnRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p~----~~~v~G~~~~g 135 (222)
...++++++...|||..| | ++|.++ + +.++...+.+|=.- +...+.|. .+..+|+.-.-
T Consensus 20 ~~~l~~d~~~g~lyvGA~--n--~ly~Ls-~-~L~~~~~~~tgP~~-----------ds~~C~p~~~~~~C~~~~~~~dN 82 (539)
T 3al9_A 20 FNHLTVHRRTGAVYVGAI--N--RVYKLT-G-NLTIQVAHKTGPEE-----------DNKACYPPLIVQPCSEVLTLTNN 82 (539)
T ss_dssp EEEEEECTTTCCEEEEET--T--EEEEEC-T-TCCEEEEEECCCEE-----------ECTTCSSCTTTSCCCSCCEEECC
T ss_pred EEEEEEeCCCCEEEEEEe--e--eEEECC-C-CcccccccccCCcc-----------CcccccCccchhhccccCCCCCc
Confidence 478999999999999987 4 456664 2 46666666664211 11222331 22223332111
Q ss_pred CCeeEEECCCCCEEEEEeCCCCcc
Q 027522 136 GPQMIQLSLDGKRLYVTNSLFSAW 159 (222)
Q Consensus 136 gPr~~~lspdGk~LyvaNsl~~~w 159 (222)
.-+.+.+++.+.+||++-|.|..-
T Consensus 83 ~nkvLl~~~~~~~L~~CGS~~qg~ 106 (539)
T 3al9_A 83 VNKLLIIDYSENRLLACGSLYQGV 106 (539)
T ss_dssp CEEEEEEEGGGTEEEEEESSTTTC
T ss_pred eEEEEEEecCCCeEEEeecCCCCC
Confidence 234577888899999998876543
No 323
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=25.95 E-value=1.4e+02 Score=26.50 Aligned_cols=21 Identities=14% Similarity=0.224 Sum_probs=14.4
Q ss_pred CeEEEEeccCceEEEEEeCCCCC
Q 027522 12 DIGFVGCALASTMVRFSKTQDGS 34 (222)
Q Consensus 12 ~~aYvv~ELsstV~~~~~d~~g~ 34 (222)
..+||.++ ++.|+.+..+ +|+
T Consensus 11 ~~V~v~t~-dG~l~Ald~~-tG~ 31 (339)
T 2be1_A 11 DILIAADV-EGGLHAVDRR-NGH 31 (339)
T ss_dssp EEEEEEET-TSCEEEEETT-TTE
T ss_pred CEEEEEeC-CCeEEEEECC-CCc
Confidence 35677665 8888888763 564
No 324
>2vlg_A Sporulation kinase A; histidine kinase, two-component regulatory system, two-component signal transduction, transferase, phosphorylation, SCOD; 1.7A {Bacillus subtilis}
Probab=25.73 E-value=28 Score=25.01 Aligned_cols=16 Identities=19% Similarity=0.410 Sum_probs=13.2
Q ss_pred EEEEcCCCCEEEEEeC
Q 027522 62 DFLISLDDRFLYFSNW 77 (222)
Q Consensus 62 dI~iSpDgrfLYvSnR 77 (222)
=+.+++||+++|||-.
T Consensus 12 i~v~d~~G~i~yvn~~ 27 (111)
T 2vlg_A 12 HAVLASNGRIIYISAN 27 (111)
T ss_dssp EEEECTTSBEEEECTT
T ss_pred EEEEcCCCeEEEEChH
Confidence 3567899999999865
No 325
>2l2f_A Cyanovirin-N homolog; lectin, carbohydrate binding protein, binding protein; NMR {Gibberella zeae}
Probab=22.57 E-value=2.3e+02 Score=20.81 Aligned_cols=20 Identities=10% Similarity=-0.021 Sum_probs=16.9
Q ss_pred CceeEEEEcCCCCEEEEEeCC
Q 027522 58 GLITDFLISLDDRFLYFSNWL 78 (222)
Q Consensus 58 ~~~adI~iSpDgrfLYvSnRg 78 (222)
..+.+|.|. |+.+|.+.|+.
T Consensus 6 ~Sc~di~l~-~g~~L~A~C~~ 25 (108)
T 2l2f_A 6 ESSNNIWLE-DGHILHAECGN 25 (108)
T ss_dssp TSEEEEEEE-TTTEEEEEEEC
T ss_pred ccccCEEEC-CCCEEEEEEEC
Confidence 457899997 89999999983
No 326
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=22.30 E-value=1.9e+02 Score=26.70 Aligned_cols=79 Identities=8% Similarity=-0.048 Sum_probs=44.0
Q ss_pred eEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeeeCCCCCCCC-CCccccCccc--CCCC
Q 027522 61 TDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQS-DVPEVQGHRL--RGGP 137 (222)
Q Consensus 61 adI~iSpDgrfLYvSnRgh~sI~vf~i~d~~~~~L~~~v~~gG~~~~~~~~~~~~~~~~~~~p-~~~~v~G~~~--~ggP 137 (222)
+.+.++++...|||..|.+ +|.++ .+.++..++.+|=.. +-.++| ..+...|+.. .-.-
T Consensus 18 ~~l~ld~~~~~lYVGA~n~----ly~L~--~~L~~~~~~~tgP~~------------d~~c~~~~~c~~~~~~~~tdn~N 79 (527)
T 4fww_A 18 VTYEGDRNESAVFVAIRNR----LHVLG--PDLKSVQSLATGPAG------------DPGCQTCAACGPGPHGPPGDTDT 79 (527)
T ss_dssp EEEECTTSCEEEEEEETTE----EEEEC--TTSCEEEEEECCCBT------------CTTCHHHHTTSSSCCSSCBCCCE
T ss_pred EEEEEcCCCCEEEEEEece----EEEeC--CCcceeeEEEeCCcC------------CCCCcCchhcccCCCCCccccce
Confidence 4566799999999998743 57774 247777777664110 001111 0111112210 0001
Q ss_pred eeEEECCCCCEEEEEeCCCC
Q 027522 138 QMIQLSLDGKRLYVTNSLFS 157 (222)
Q Consensus 138 r~~~lspdGk~LyvaNsl~~ 157 (222)
..+.|++.+.+||++-++|.
T Consensus 80 kiLll~~~~~~Li~CGSafq 99 (527)
T 4fww_A 80 KVLVLDPALPALVSCGSSLQ 99 (527)
T ss_dssp EEEEEETTTTEEEEEESSGG
T ss_pred EEEEEecCCCEEEEEeCCCC
Confidence 23567899999999987554
No 327
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=21.84 E-value=5.1e+02 Score=24.96 Aligned_cols=73 Identities=15% Similarity=0.159 Sum_probs=40.6
Q ss_pred eEEEcCC-CCeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcC-CCCEEEEEeCCCCc
Q 027522 4 RFLHDPS-KDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISL-DDRFLYFSNWLHGD 81 (222)
Q Consensus 4 r~afhP~-g~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSp-DgrfLYvSnRgh~s 81 (222)
+++++|. .+.+|+..+- ..|++ ..|...+|+... .+|...... .....|.++| |+..||+..+...
T Consensus 125 ~iav~p~~~~~v~~g~~~-~gl~~-S~DgG~TW~~~~---~~~~~~~~~------~~~~~i~~~p~~~~~~~~~~~~~~- 192 (789)
T 1sqj_A 125 RLAVNPFNSNEVWMGTRT-EGIWK-SSDRAKTWTNVT---SIPDAFTNG------IGYTSVIFDPERNGTIYASATAPQ- 192 (789)
T ss_dssp CEEEETTEEEEEEEECSS-SCEEE-ESSTTSSCEEET---TSCCCCSTT------TCEEEEEECTTSTTCEEEEESSTT-
T ss_pred EEEEcCCCCCEEEEEecc-CCEEE-ECCCCcccCCCc---cCccccCCC------CCeEEEEECCCCCCEEEEEEcCCC-
Confidence 5788885 5789998753 33332 223223686432 222111100 2347888988 5679999887532
Q ss_pred EEEEEecC
Q 027522 82 IRQYNIED 89 (222)
Q Consensus 82 I~vf~i~d 89 (222)
.+|.-.|
T Consensus 193 -~v~~S~D 199 (789)
T 1sqj_A 193 -GMYVTHD 199 (789)
T ss_dssp -CEEEESS
T ss_pred -eEEEEcC
Confidence 3455544
No 328
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=21.40 E-value=2.3e+02 Score=27.03 Aligned_cols=76 Identities=12% Similarity=0.232 Sum_probs=44.4
Q ss_pred eEEEcCCC-CeEEEEeccCceEEEEEeCCCCCeeEEEEEEecCcccccccCCCCCCceeEEEEcC-CCCEEEEEe-----
Q 027522 4 RFLHDPSK-DIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISL-DDRFLYFSN----- 76 (222)
Q Consensus 4 r~afhP~g-~~aYvv~ELsstV~~~~~d~~g~~~~~q~is~~p~~~~g~~~~~~~~~~adI~iSp-DgrfLYvSn----- 76 (222)
.+++||.. ..+|+..+-+ .|++.. |...+|+.+ ...+.. ..+.. .....|.++| |...|||+.
T Consensus 27 ~i~~~p~~~~~~~~~~~~g-gv~rS~-D~G~tW~~i--~~~~~~--~~~~~----~~i~~i~~dp~~~~~v~v~~~~~~~ 96 (737)
T 2cn3_A 27 GIVFNETEKDLIYARAAIG-GAYRWD-PSTETWIPL--LDHFQM--DEYSY----YGVESIATDPVDPNRVYIVAGMYTN 96 (737)
T ss_dssp EEEECSSSTTCEEEECSSS-CEEEEE-TTTTEEEEC--CTTCCG--GGGGG----GCEEEEEECSSSTTCEEEEECSCSS
T ss_pred EEEECCCCCCEEEEEecCC-cEEEeC-CCCCCEEEC--cCccCc--ccccC----CCcceEEeCCCCCCEEEEEeccccc
Confidence 57899974 7899988754 455543 333467641 111111 11100 2357999999 567888875
Q ss_pred -CCCCcEEEEEecC
Q 027522 77 -WLHGDIRQYNIED 89 (222)
Q Consensus 77 -Rgh~sI~vf~i~d 89 (222)
|+.+...+|.-+|
T Consensus 97 ~~~~~~~~l~~S~D 110 (737)
T 2cn3_A 97 DWLPNMGAILRSTD 110 (737)
T ss_dssp SSSCCCCEEEEESS
T ss_pred ccccCCccEEEeCC
Confidence 3333466777765
No 329
>3f1p_A Endothelial PAS domain-containing protein 1; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.7 PDB: 3f1o_A* 3f1n_A 3h7w_A* 3h82_A* 1p97_A 2a24_A 4h6j_A
Probab=20.11 E-value=60 Score=21.64 Aligned_cols=18 Identities=22% Similarity=0.161 Sum_probs=14.3
Q ss_pred eeEEEEcCCCCEEEEEeC
Q 027522 60 ITDFLISLDDRFLYFSNW 77 (222)
Q Consensus 60 ~adI~iSpDgrfLYvSnR 77 (222)
..=+.+++||+++|+|..
T Consensus 10 ~~i~~~d~~g~i~~~n~~ 27 (117)
T 3f1p_A 10 TFLSEHSMDMKFTYCDDR 27 (117)
T ss_dssp EEEEEECTTCBEEEECTH
T ss_pred cEEEEECCCceEEEECcC
Confidence 355678999999999865
Done!