Citrus Sinensis ID: 027526
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 222 | ||||||
| 147779646 | 772 | hypothetical protein VITISV_042282 [Viti | 0.909 | 0.261 | 0.673 | 2e-76 | |
| 359483512 | 364 | PREDICTED: GDSL esterase/lipase At5g4591 | 0.909 | 0.554 | 0.673 | 5e-76 | |
| 297740481 | 1124 | unnamed protein product [Vitis vinifera] | 0.869 | 0.171 | 0.680 | 3e-73 | |
| 224079107 | 378 | predicted protein [Populus trichocarpa] | 0.878 | 0.515 | 0.679 | 1e-72 | |
| 224093236 | 378 | predicted protein [Populus trichocarpa] | 0.833 | 0.489 | 0.718 | 2e-72 | |
| 356555408 | 374 | PREDICTED: GDSL esterase/lipase At5g4591 | 0.819 | 0.486 | 0.661 | 5e-66 | |
| 363808334 | 375 | uncharacterized protein LOC100815771 pre | 0.819 | 0.485 | 0.655 | 2e-65 | |
| 357446933 | 374 | GDSL esterase/lipase [Medicago truncatul | 0.788 | 0.467 | 0.662 | 1e-61 | |
| 359485277 | 364 | PREDICTED: LOW QUALITY PROTEIN: GDSL est | 0.887 | 0.541 | 0.556 | 5e-58 | |
| 302143392 | 294 | unnamed protein product [Vitis vinifera] | 0.842 | 0.636 | 0.579 | 2e-56 |
| >gi|147779646|emb|CAN64953.1| hypothetical protein VITISV_042282 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/205 (67%), Positives = 169/205 (82%), Gaps = 3/205 (1%)
Query: 1 MKFFHLV---FALCLLRSVSTSHLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGE 57
M+F L+ F LC +VST +Y +IF+FGDSL+DTGNFL+SGALAFPVI +LPYGE
Sbjct: 1 MRFSFLIPFLFILCRFSTVSTCDKRYESIFSFGDSLADTGNFLLSGALAFPVIRELPYGE 60
Query: 58 TFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSVIF 117
TFFRHATGRCSDGRL++DF+AEAF +PYLPPYL+L +G++F+HGVNFAVAGATAL F
Sbjct: 61 TFFRHATGRCSDGRLIVDFIAEAFGIPYLPPYLSLGKGKSFRHGVNFAVAGATALDPEFF 120
Query: 118 YKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAF 177
Y QK+G LWTN+SLSVQ+ WFKKLK SIC+T+K C+ +F+KS+F VGEIGGNDYNY F
Sbjct: 121 YHQKLGRILWTNNSLSVQLGWFKKLKPSICTTKKGCDNFFRKSIFLVGEIGGNDYNYPFF 180
Query: 178 VGESINQLRASVPLVVKAITNATRV 202
VG SI Q++A VPLVV+AIT A +
Sbjct: 181 VGGSIKQVQALVPLVVEAITKAASM 205
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359483512|ref|XP_002267222.2| PREDICTED: GDSL esterase/lipase At5g45910-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297740481|emb|CBI30663.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224079107|ref|XP_002305752.1| predicted protein [Populus trichocarpa] gi|222848716|gb|EEE86263.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224093236|ref|XP_002334852.1| predicted protein [Populus trichocarpa] gi|222875217|gb|EEF12348.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356555408|ref|XP_003546024.1| PREDICTED: GDSL esterase/lipase At5g45910-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|363808334|ref|NP_001242505.1| uncharacterized protein LOC100815771 precursor [Glycine max] gi|255635329|gb|ACU18018.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357446933|ref|XP_003593742.1| GDSL esterase/lipase [Medicago truncatula] gi|355482790|gb|AES63993.1| GDSL esterase/lipase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|359485277|ref|XP_003633253.1| PREDICTED: LOW QUALITY PROTEIN: GDSL esterase/lipase At5g45910-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|302143392|emb|CBI21953.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 222 | ||||||
| TAIR|locus:2152385 | 372 | AT5G45910 "AT5G45910" [Arabido | 0.810 | 0.483 | 0.579 | 6.3e-53 | |
| TAIR|locus:2018718 | 385 | AT1G28650 "AT1G28650" [Arabido | 0.864 | 0.498 | 0.469 | 1.7e-41 | |
| TAIR|locus:2018693 | 384 | ARAB-1 "AT1G28670" [Arabidopsi | 0.878 | 0.507 | 0.455 | 1.2e-40 | |
| TAIR|locus:2018673 | 389 | AT1G28570 "AT1G28570" [Arabido | 0.873 | 0.498 | 0.450 | 6.8e-40 | |
| TAIR|locus:2018743 | 403 | AT1G28590 "AT1G28590" [Arabido | 0.945 | 0.521 | 0.412 | 4.9e-37 | |
| TAIR|locus:2018753 | 393 | AT1G28600 "AT1G28600" [Arabido | 0.779 | 0.440 | 0.463 | 8e-37 | |
| TAIR|locus:2018758 | 390 | AT1G28580 "AT1G28580" [Arabido | 0.878 | 0.5 | 0.439 | 1.7e-36 | |
| TAIR|locus:2018703 | 383 | AT1G28660 "AT1G28660" [Arabido | 0.873 | 0.506 | 0.425 | 4.4e-36 | |
| TAIR|locus:2028661 | 394 | AT1G31550 "AT1G31550" [Arabido | 0.882 | 0.497 | 0.440 | 7.2e-36 | |
| TAIR|locus:2018733 | 383 | AT1G28610 "AT1G28610" [Arabido | 0.869 | 0.503 | 0.421 | 2.4e-35 |
| TAIR|locus:2152385 AT5G45910 "AT5G45910" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 106/183 (57%), Positives = 130/183 (71%)
Query: 21 LKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEA 80
LKY +IFNFGDSLSDTGNFL+SG + P IG+LPYG+TFF +TGRCSDGRL+IDF+AEA
Sbjct: 26 LKYESIFNFGDSLSDTGNFLLSGDVDSPNIGRLPYGQTFFNRSTGRCSDGRLIIDFIAEA 85
Query: 81 FRLPYLPPYL-ALK--EGQNFKHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQID 137
LPY+PPYL +L+ + +FK G NFAVAGATA F + + L TN +L +Q+D
Sbjct: 86 SGLPYIPPYLQSLRTNDSVDFKRGANFAVAGATANEFSFFKNRGLSVTLLTNKTLDIQLD 145
Query: 138 WFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAIT 197
WFKKLK S+C T+ +CE YF+KSLF VGEIGGNDYNY S VP V+ I
Sbjct: 146 WFKKLKPSLCKTKPECEQYFRKSLFLVGEIGGNDYNYPLLAFRSFKHAMDLVPFVINKIM 205
Query: 198 NAT 200
+ T
Sbjct: 206 DVT 208
|
|
| TAIR|locus:2018718 AT1G28650 "AT1G28650" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2018693 ARAB-1 "AT1G28670" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2018673 AT1G28570 "AT1G28570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2018743 AT1G28590 "AT1G28590" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2018753 AT1G28600 "AT1G28600" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2018758 AT1G28580 "AT1G28580" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2018703 AT1G28660 "AT1G28660" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2028661 AT1G31550 "AT1G31550" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2018733 AT1G28610 "AT1G28610" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00035902001 | SubName- Full=Chromosome chr10 scaffold_81, whole genome shotgun sequence; (364 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 222 | |||
| cd01837 | 315 | cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase | 9e-59 | |
| cd01846 | 270 | cd01846, fatty_acyltransferase_like, Fatty acyltra | 5e-12 | |
| PLN03156 | 351 | PLN03156, PLN03156, GDSL esterase/lipase; Provisio | 1e-11 |
| >gnl|CDD|238875 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
Score = 187 bits (477), Expect = 9e-59
Identities = 70/184 (38%), Positives = 93/184 (50%), Gaps = 13/184 (7%)
Query: 25 AIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLP 84
A+F FGDSL DTGN LA PYG F TGR S+GRL+IDF+AEA LP
Sbjct: 2 ALFVFGDSLVDTGNNNYLPTLAK--ANFPPYGIDFPGRPTGRFSNGRLIIDFIAEALGLP 59
Query: 85 YL-PPYLALKEGQNFKHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLK 143
L PPYL+ +F GVNFA GA L S L + SLSVQ+++FK+ K
Sbjct: 60 LLPPPYLSPNGSSDFLTGVNFASGGAGILDS--------TGFLGSVISLSVQLEYFKEYK 111
Query: 144 SSICST-RKDCETYFKKSLFFVGEIGGNDYNYRAFVGES-INQLRASVPLVVKAITNATR 201
+ + ++ F+ IG NDY F + ++ A VP +V I++A +
Sbjct: 112 ERLRALVGEEAAADILSKSLFLISIGSNDYLNNYFANPTRQYEVEAYVPFLVSNISSAIK 171
Query: 202 VCYA 205
Y
Sbjct: 172 RLYD 175
|
The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Length = 315 |
| >gnl|CDD|238882 cd01846, fatty_acyltransferase_like, Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >gnl|CDD|178701 PLN03156, PLN03156, GDSL esterase/lipase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 222 | |||
| PLN03156 | 351 | GDSL esterase/lipase; Provisional | 100.0 | |
| cd01837 | 315 | SGNH_plant_lipase_like SGNH_plant_lipase_like, a p | 100.0 | |
| cd01847 | 281 | Triacylglycerol_lipase_like Triacylglycerol lipase | 100.0 | |
| PRK15381 | 408 | pathogenicity island 2 effector protein SseJ; Prov | 100.0 | |
| cd01846 | 270 | fatty_acyltransferase_like Fatty acyltransferase-l | 99.95 | |
| COG3240 | 370 | Phospholipase/lecithinase/hemolysin [Lipid metabol | 99.52 | |
| PF00657 | 234 | Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; Inter | 99.13 | |
| cd01839 | 208 | SGNH_arylesterase_like SGNH_hydrolase subfamily, s | 97.11 | |
| cd01832 | 185 | SGNH_hydrolase_like_1 Members of the SGNH-hydrolas | 96.93 | |
| cd01824 | 288 | Phospholipase_B_like Phospholipase-B_like. This su | 96.66 | |
| cd01823 | 259 | SEST_like SEST_like. A family of secreted SGNH-hyd | 96.65 | |
| cd01844 | 177 | SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SG | 96.25 | |
| cd01827 | 188 | sialate_O-acetylesterase_like1 sialate O-acetylest | 95.94 | |
| cd01830 | 204 | XynE_like SGNH_hydrolase subfamily, similar to the | 95.87 | |
| cd01822 | 177 | Lysophospholipase_L1_like Lysophospholipase L1-lik | 95.81 | |
| cd01836 | 191 | FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee | 95.54 | |
| cd01825 | 189 | SGNH_hydrolase_peri1 SGNH_peri1; putative periplas | 95.52 | |
| cd01821 | 198 | Rhamnogalacturan_acetylesterase_like Rhamnogalactu | 95.18 | |
| cd04501 | 183 | SGNH_hydrolase_like_4 Members of the SGNH-hydrolas | 95.14 | |
| PRK10528 | 191 | multifunctional acyl-CoA thioesterase I and protea | 95.02 | |
| KOG3670 | 397 | consensus Phospholipase [Lipid transport and metab | 94.74 | |
| cd01838 | 199 | Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd | 94.13 | |
| PF13472 | 179 | Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase fami | 94.11 | |
| cd01835 | 193 | SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SG | 93.25 | |
| cd01831 | 169 | Endoglucanase_E_like Endoglucanase E-like members | 92.43 | |
| PF14606 | 178 | Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase fami | 92.38 |
| >PLN03156 GDSL esterase/lipase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-47 Score=338.00 Aligned_cols=201 Identities=25% Similarity=0.392 Sum_probs=159.9
Q ss_pred HHHHHHhhhccCCCCCccEEEEeCCchhhcCCCCCCCCCcCCCCCCCCCCCCCCC-CCCccCCCCchHHHHHHHhcCC-C
Q 027526 7 VFALCLLRSVSTSHLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFR-HATGRCSDGRLVIDFMAEAFRL-P 84 (222)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~l~~FGDSlsDtGn~~~~~~~~~~~~~~~PyG~~~~~-~~~gRfSnG~~~~D~la~~lGl-~ 84 (222)
+++.|+...++.+. .+++||+||||++||||++.+.+. .+++.||||++|++ +|+|||||||+|+||||+.||+ |
T Consensus 12 ~~~~~~~~~~~~~~-~~~aifvFGDSl~D~GN~~~l~~~--~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl~p 88 (351)
T PLN03156 12 LLAQLLVLVAETCA-KVPAIIVFGDSSVDAGNNNQISTV--AKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGLKP 88 (351)
T ss_pred HHHHHHHHHhcccC-CCCEEEEecCcCccCCCccccccc--cccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCCCC
Confidence 34444444444444 599999999999999999876542 22578999999986 5999999999999999999999 8
Q ss_pred CCCcccccc-cCCCCCccccccccCccccccchhhhccccccccccCcHHHHHHHHHHHHhhhhc--ccccccccccCCe
Q 027526 85 YLPPYLALK-EGQNFKHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICS--TRKDCETYFKKSL 161 (222)
Q Consensus 85 ~~ppyl~~~-~g~~~~~G~NFA~gGA~~~~~~~~~~~~~~~~~~~~~~L~~Qv~~f~~~~~~~~~--g~~~~~~~~~~sL 161 (222)
++|||+.+. .+.++.+|+|||+|||++.+.+.. ....++|..||++|++++++++. +..++++++++||
T Consensus 89 ~~ppyl~~~~~~~~~~~GvNFA~agag~~~~~~~--------~~~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~~~~sL 160 (351)
T PLN03156 89 AIPAYLDPSYNISDFATGVCFASAGTGYDNATSD--------VLSVIPLWKELEYYKEYQTKLRAYLGEEKANEIISEAL 160 (351)
T ss_pred CCCCCcCcccCchhhcccceeecCCccccCCCcc--------ccCccCHHHHHHHHHHHHHHHHHhhChHHHHHHHhcCe
Confidence 999999764 456899999999999998765431 11246899999999998877664 4445567789999
Q ss_pred EEEeeeccchhhhhcc--cc-cchhhhhhhHHHHHHHHHHHHHHHHH-HHhhhhhhccCCCCCC
Q 027526 162 FFVGEIGGNDYNYRAF--VG-ESINQLRASVPLVVKAITNATRVCYA-NLQSLLEPFLNTQEIS 221 (222)
Q Consensus 162 ~~ig~iG~NDy~~~~~--~~-~s~~~~~~~v~~vv~~i~~~i~~Ly~-gar~~l~~~~~~~~~~ 221 (222)
|+| |||+|||+.+++ .. ....++++|++.|++.++++|++||+ |||||+ ..|.+++.
T Consensus 161 ~~i-~iG~NDy~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~--V~~lpplG 221 (351)
T PLN03156 161 YLI-SIGTNDFLENYYTFPGRRSQYTVSQYQDFLIGIAENFVKKLYRLGARKIS--LGGLPPMG 221 (351)
T ss_pred EEE-EecchhHHHHhhccccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEE--ecCCCccc
Confidence 999 999999985442 11 12234678999999999999999999 999999 88888874
|
|
| >cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >PRK15381 pathogenicity island 2 effector protein SseJ; Provisional | Back alignment and domain information |
|---|
| >cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] | Back alignment and domain information |
|---|
| >PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified [] | Back alignment and domain information |
|---|
| >cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A | Back alignment and domain information |
|---|
| >cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01824 Phospholipase_B_like Phospholipase-B_like | Back alignment and domain information |
|---|
| >cd01823 SEST_like SEST_like | Back alignment and domain information |
|---|
| >cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE | Back alignment and domain information |
|---|
| >cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases | Back alignment and domain information |
|---|
| >cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases | Back alignment and domain information |
|---|
| >cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases | Back alignment and domain information |
|---|
| >cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional | Back alignment and domain information |
|---|
| >KOG3670 consensus Phospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins | Back alignment and domain information |
|---|
| >PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A | Back alignment and domain information |
|---|
| >cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans | Back alignment and domain information |
|---|
| >PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 222 | |||
| 3kvn_X | 632 | Esterase ESTA; beta barrel, alpha-beta-alpha motif | 4e-20 |
| >3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Length = 632 | Back alignment and structure |
|---|
Score = 87.1 bits (215), Expect = 4e-20
Identities = 35/205 (17%), Positives = 59/205 (28%), Gaps = 17/205 (8%)
Query: 13 LRSVSTSHLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRH-ATGRCSDGR 71
+ Y + FGDSLSD G F A + G
Sbjct: 6 HHHLEAPS-PYSTLVVFGDSLSDAGQFPDPAGPAGS--TSRFTNRVGPTYQNGSGEIFGP 62
Query: 72 LVIDFMAEAFRLP--YLPPYLALK-EGQNFKHGVNFAVAGATALRSVIFYKQKIGSRLWT 128
+ + L + Q G N+AV G + GS +
Sbjct: 63 TAPMLLGNQLGIAPGDLAASTSPVNAQQGIADGNNWAVGGYRTDQIYDSITAANGSLIER 122
Query: 129 NDSLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDY-NYRAFVGESINQLRA 187
+++L D + ++ +L+++ GGND+ R Q
Sbjct: 123 DNTLLRSRDGYLVDRARQGL------GADPNALYYIT-GGGNDFLQGRILNDVQAQQAAG 175
Query: 188 SVPLVVKAITN--ATRVCYANLQSL 210
+ V+A+ A + L L
Sbjct: 176 RLVDSVQALQQAGARYIVVWLLPDL 200
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 222 | |||
| 3kvn_X | 632 | Esterase ESTA; beta barrel, alpha-beta-alpha motif | 100.0 | |
| 3mil_A | 240 | Isoamyl acetate-hydrolyzing esterase; SGNH-hydrola | 97.74 | |
| 2q0q_A | 216 | ARYL esterase; SGNH hydrolase, oligomeric enzyme, | 97.7 | |
| 3rjt_A | 216 | Lipolytic protein G-D-S-L family; PSI-biology, mid | 97.68 | |
| 3dci_A | 232 | Arylesterase; SGNH_hydrolase SUBF structural genom | 97.51 | |
| 1ivn_A | 190 | Thioesterase I; hydrolase, protease; 1.90A {Escher | 96.78 | |
| 3bzw_A | 274 | Putative lipase; protein structure initiative II, | 96.62 | |
| 3dc7_A | 232 | Putative uncharacterized protein LP_3323; NESG LPR | 96.38 | |
| 1yzf_A | 195 | Lipase/acylhydrolase; structural GENO PSI, protein | 96.08 | |
| 1esc_A | 306 | Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23. | 95.82 | |
| 3skv_A | 385 | SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydr | 95.78 | |
| 1vjg_A | 218 | Putative lipase from the G-D-S-L family; structura | 95.44 | |
| 3hp4_A | 185 | GDSL-esterase; psychrotrophic, monoethylphosphonat | 95.23 | |
| 2w9x_A | 366 | AXE2A, CJCE2B, putative acetyl xylan esterase; car | 94.75 | |
| 1k7c_A | 233 | Rhamnogalacturonan acetylesterase; N-linked glycos | 94.73 | |
| 2wao_A | 341 | Endoglucanase E; plant cell WALL degradation, carb | 94.56 | |
| 2vpt_A | 215 | Lipolytic enzyme; esterase, hydrolase; 1.40A {Clos | 93.02 | |
| 2o14_A | 375 | Hypothetical protein YXIM; NESG, X-RAY, SR595, str | 92.94 | |
| 2waa_A | 347 | Acetyl esterase, xylan esterase, putative, AXE2C; | 91.67 |
| >3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=274.68 Aligned_cols=180 Identities=16% Similarity=0.154 Sum_probs=132.9
Q ss_pred CCCccEEEEeCCchhhcCCCCCCCCCcCCC-CCCCCCCCCCCCCCCccCC-CCchHHHHHHHhcCCC--CCCcccccc-c
Q 027526 20 HLKYHAIFNFGDSLSDTGNFLVSGALAFPV-IGKLPYGETFFRHATGRCS-DGRLVIDFMAEAFRLP--YLPPYLALK-E 94 (222)
Q Consensus 20 ~~~~~~l~~FGDSlsDtGn~~~~~~~~~~~-~~~~PyG~~~~~~~~gRfS-nG~~~~D~la~~lGl~--~~ppyl~~~-~ 94 (222)
+.+|++||+||||+|||||.........+. ....|+|.+|+ +|||| |||+|+||||+.||+| +++||+... .
T Consensus 12 ~~~~~~i~~FGDS~sDtGn~~~~~~~~~~~~~~~~~~g~~~~---~Gr~s~~G~~~~D~ia~~lgl~~~~l~p~~~~~~~ 88 (632)
T 3kvn_X 12 PSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRVGPTYQ---NGSGEIFGPTAPMLLGNQLGIAPGDLAASTSPVNA 88 (632)
T ss_dssp CCCCSCEEEECSTTTCCSCSBCTTSSTTCBCCSSCBCSSSCC---TTSSCCBCCCHHHHHHHHTTCCGGGGSBSSCHHHH
T ss_pred CCCCccEEEEccccccCCCcccccCCcCCccccccCCCCccc---cCcccccCCchHHHHHHHcCCCccccCcccccccc
Confidence 457999999999999999987654311100 00112377776 89999 9999999999999998 377887642 3
Q ss_pred CCCCCccccccccCccc---cccchhhhccccccccccCcHHHHHHHHH-HHHhhhhcccccccccccCCeEEEeeeccc
Q 027526 95 GQNFKHGVNFAVAGATA---LRSVIFYKQKIGSRLWTNDSLSVQIDWFK-KLKSSICSTRKDCETYFKKSLFFVGEIGGN 170 (222)
Q Consensus 95 g~~~~~G~NFA~gGA~~---~~~~~~~~~~~~~~~~~~~~L~~Qv~~f~-~~~~~~~~g~~~~~~~~~~sL~~ig~iG~N 170 (222)
+.++.+|+|||+|||++ ++.+... ...+++|..||.+|. ++++++. ..+.+.++++||+| |||+|
T Consensus 89 ~~~~~~G~NfA~gGa~~~~~l~~~~~~-------~~~~~~l~~ql~~~~~~~l~~~~---~~~~~~~~~sL~~v-~iG~N 157 (632)
T 3kvn_X 89 QQGIADGNNWAVGGYRTDQIYDSITAA-------NGSLIERDNTLLRSRDGYLVDRA---RQGLGADPNALYYI-TGGGN 157 (632)
T ss_dssp HHTCCCCSBCCCTTCCHHHHHHHHHST-------TCEEEEETTEEEEEECCHHHHHH---TTTCCCCTTSEEEE-CCSHH
T ss_pred ccccccCceEeeccccccccccccccc-------cccccccchhHHHHHHHHHHHHh---hccCccCCCCEEEE-EEech
Confidence 67899999999999997 4332211 123455666766555 3333332 13456789999999 99999
Q ss_pred hhhhhcccccchhhhhhhHHHHHHHHHHHHHHHHH-HHhhhhhhccCCCCCC
Q 027526 171 DYNYRAFVGESINQLRASVPLVVKAITNATRVCYA-NLQSLLEPFLNTQEIS 221 (222)
Q Consensus 171 Dy~~~~~~~~s~~~~~~~v~~vv~~i~~~i~~Ly~-gar~~l~~~~~~~~~~ 221 (222)
||+..+... .++++.+|+.+.++|++||+ |||+|+ +.|++||.
T Consensus 158 D~~~~~~~~------~~~~~~~v~~~~~~v~~L~~~Gar~~~--v~~~pp~g 201 (632)
T 3kvn_X 158 DFLQGRILN------DVQAQQAAGRLVDSVQALQQAGARYIV--VWLLPDLG 201 (632)
T ss_dssp HHHTTCCCS------HHHHHHHHHHHHHHHHHHHHTTCCCEE--EECCCCGG
T ss_pred hhhcccccC------hHHHHHHHHHHHHHHHHHHHcCCcEEE--EeCCCCCC
Confidence 999876422 25789999999999999999 999999 88888763
|
| >3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A* | Back alignment and structure |
|---|
| >3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
| >3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
| >1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A* | Back alignment and structure |
|---|
| >3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9 | Back alignment and structure |
|---|
| >3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9 | Back alignment and structure |
|---|
| >1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5 | Back alignment and structure |
|---|
| >1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A | Back alignment and structure |
|---|
| >3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP} | Back alignment and structure |
|---|
| >1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A | Back alignment and structure |
|---|
| >3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 | Back alignment and structure |
|---|
| >2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus} | Back alignment and structure |
|---|
| >1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A* | Back alignment and structure |
|---|
| >2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A* | Back alignment and structure |
|---|
| >2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum} | Back alignment and structure |
|---|
| >2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 | Back alignment and structure |
|---|
| >2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 222 | |||
| d1esca_ | 302 | Esterase {Streptomyces scabies [TaxId: 1930]} | 97.99 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 97.46 | |
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 97.03 | |
| d1k7ca_ | 233 | Rhamnogalacturonan acetylesterase {Fungus (Aspergi | 96.68 | |
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 95.4 | |
| d1jrla_ | 179 | Thioesterase I, TAP {Escherichia coli [TaxId: 562] | 94.42 | |
| d1yzfa1 | 195 | Lipase/acylhydrolase {Enterococcus faecalis [TaxId | 94.31 |
| >d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: Esterase domain: Esterase species: Streptomyces scabies [TaxId: 1930]
Probab=97.99 E-value=2e-06 Score=70.65 Aligned_cols=35 Identities=6% Similarity=-0.078 Sum_probs=25.1
Q ss_pred CchHHHHHHHhcCCCCCCcccccccCCCCCccccccccCcccccc
Q 027526 70 GRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRS 114 (222)
Q Consensus 70 G~~~~D~la~~lGl~~~ppyl~~~~g~~~~~G~NFA~gGA~~~~~ 114 (222)
+..|++++++.|+.....+ ..-.|+|.+|+++.+.
T Consensus 35 ~~~y~~~la~~l~~~~~~~----------~~~~n~a~sGatt~~~ 69 (302)
T d1esca_ 35 KENYPAVATRSLADKGITL----------DVQADVSCGGALIHHF 69 (302)
T ss_dssp TTCHHHHHHHHHHTTTCEE----------EEEEECCCTTCCGGGG
T ss_pred CcCHHHHHHHHhccccCCc----------eeEEEeeecccchhhh
Confidence 6789999999998753211 1126999999997643
|
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
| >d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
|---|
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|