Query 027527
Match_columns 222
No_of_seqs 144 out of 1273
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 19:03:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027527.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027527hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mng_A Peroxiredoxin-5, mitoch 99.9 1.5E-23 5.2E-28 172.1 11.3 108 67-174 13-125 (173)
2 4g2e_A Peroxiredoxin; redox pr 99.9 7.3E-24 2.5E-28 169.7 8.3 104 69-173 4-107 (157)
3 4gqc_A Thiol peroxidase, perox 99.9 1E-24 3.5E-29 176.5 2.8 104 69-172 5-109 (164)
4 2wfc_A Peroxiredoxin 5, PRDX5; 99.9 8.8E-23 3E-27 165.9 12.7 106 69-174 3-113 (167)
5 3uma_A Hypothetical peroxiredo 99.9 4.4E-23 1.5E-27 170.9 10.2 107 67-173 24-137 (184)
6 3gkn_A Bacterioferritin comigr 99.9 6.9E-22 2.3E-26 156.9 12.6 110 63-173 1-112 (163)
7 2pwj_A Mitochondrial peroxired 99.9 4.3E-22 1.5E-26 162.1 9.4 105 69-173 7-124 (171)
8 3ixr_A Bacterioferritin comigr 99.9 5.7E-22 2E-26 161.7 9.1 108 65-173 17-128 (179)
9 3drn_A Peroxiredoxin, bacterio 99.9 4.5E-21 1.5E-25 152.8 14.0 104 69-173 2-106 (161)
10 1tp9_A Peroxiredoxin, PRX D (t 99.9 1.6E-21 5.3E-26 156.5 11.1 105 69-173 4-116 (162)
11 2a4v_A Peroxiredoxin DOT5; yea 99.9 1.7E-21 5.8E-26 154.7 11.0 108 67-175 5-113 (159)
12 3p7x_A Probable thiol peroxida 99.8 3.5E-20 1.2E-24 148.5 11.7 101 69-173 20-122 (166)
13 1nm3_A Protein HI0572; hybrid, 99.8 2.8E-20 9.7E-25 157.9 10.5 105 69-173 3-113 (241)
14 1xvw_A Hypothetical protein RV 99.8 5E-20 1.7E-24 145.4 11.2 103 69-172 9-114 (160)
15 2c0d_A Thioredoxin peroxidase 99.8 4.5E-20 1.5E-24 156.6 10.9 108 65-172 21-139 (221)
16 1prx_A HORF6; peroxiredoxin, h 99.8 5.4E-20 1.9E-24 156.3 10.9 103 69-172 5-117 (224)
17 4f82_A Thioredoxin reductase; 99.8 5.2E-20 1.8E-24 152.4 10.5 105 69-173 10-128 (176)
18 1n8j_A AHPC, alkyl hydroperoxi 99.8 4.6E-20 1.6E-24 151.4 10.0 102 70-172 2-110 (186)
19 3u5r_E Uncharacterized protein 99.8 7.7E-20 2.6E-24 153.5 11.6 111 68-179 31-149 (218)
20 2yzh_A Probable thiol peroxida 99.8 8.7E-20 3E-24 146.6 11.4 101 69-173 21-123 (171)
21 1psq_A Probable thiol peroxida 99.8 9.1E-20 3.1E-24 145.7 11.2 102 69-173 16-119 (163)
22 3ewl_A Uncharacterized conserv 99.8 2.8E-19 9.6E-24 137.9 12.9 108 70-179 2-115 (142)
23 2xhf_A Peroxiredoxin 5; oxidor 99.8 6E-20 2E-24 151.2 9.5 105 69-173 14-122 (171)
24 1q98_A Thiol peroxidase, TPX; 99.8 3.9E-20 1.3E-24 148.3 8.0 102 69-173 17-120 (165)
25 2i81_A 2-Cys peroxiredoxin; st 99.8 1.2E-19 4.2E-24 152.5 11.4 106 67-172 19-135 (213)
26 2h01_A 2-Cys peroxiredoxin; th 99.8 1.4E-19 4.8E-24 148.2 10.0 103 70-172 1-114 (192)
27 2v2g_A Peroxiredoxin 6; oxidor 99.8 1.7E-19 5.8E-24 154.7 10.8 103 69-172 3-113 (233)
28 1xcc_A 1-Cys peroxiredoxin; un 99.8 1.5E-19 5E-24 153.3 10.1 103 69-172 3-114 (220)
29 2bmx_A Alkyl hydroperoxidase C 99.8 3.6E-19 1.2E-23 146.3 11.8 105 67-172 2-125 (195)
30 1we0_A Alkyl hydroperoxide red 99.8 3.7E-19 1.3E-23 144.9 11.8 102 70-172 2-111 (187)
31 3zrd_A Thiol peroxidase; oxido 99.8 8.4E-20 2.9E-24 152.1 8.0 102 69-173 52-155 (200)
32 1zof_A Alkyl hydroperoxide-red 99.8 2.8E-19 9.7E-24 147.0 10.9 103 70-172 2-116 (198)
33 1xiy_A Peroxiredoxin, pfaop; a 99.8 1.5E-19 5.2E-24 150.0 9.2 103 70-172 2-123 (182)
34 3tue_A Tryparedoxin peroxidase 99.8 1.7E-19 6E-24 154.0 9.2 105 68-173 25-140 (219)
35 4fo5_A Thioredoxin-like protei 99.8 4.7E-19 1.6E-23 137.5 10.0 110 67-179 5-119 (143)
36 1uul_A Tryparedoxin peroxidase 99.8 7.1E-19 2.4E-23 145.5 11.7 104 68-172 5-119 (202)
37 3eur_A Uncharacterized protein 99.8 1.2E-18 4.1E-23 135.1 12.0 110 68-179 4-119 (142)
38 3sbc_A Peroxiredoxin TSA1; alp 99.8 4.2E-19 1.4E-23 151.3 10.2 103 69-172 23-135 (216)
39 3fw2_A Thiol-disulfide oxidore 99.8 1.4E-18 4.7E-23 135.9 12.2 110 68-179 4-122 (150)
40 2lrn_A Thiol:disulfide interch 99.8 1.5E-18 5.2E-23 136.0 12.3 109 69-179 3-115 (152)
41 2f9s_A Thiol-disulfide oxidore 99.8 1.8E-18 6.2E-23 134.9 12.6 107 71-179 2-109 (151)
42 2ywi_A Hypothetical conserved 99.8 1.5E-18 5E-23 141.2 12.4 111 68-179 17-136 (196)
43 3gl3_A Putative thiol:disulfid 99.8 3E-18 1E-22 133.3 13.6 108 69-179 3-111 (152)
44 2pn8_A Peroxiredoxin-4; thiore 99.8 5.9E-19 2E-23 148.1 10.0 105 67-172 17-131 (211)
45 3qpm_A Peroxiredoxin; oxidored 99.8 7.7E-19 2.6E-23 150.7 11.0 105 67-172 46-160 (240)
46 3kcm_A Thioredoxin family prot 99.8 2.7E-18 9.1E-23 133.9 13.0 108 70-179 3-112 (154)
47 3tjj_A Peroxiredoxin-4; thiore 99.8 5.4E-19 1.8E-23 153.3 9.6 107 65-172 58-174 (254)
48 1qmv_A Human thioredoxin perox 99.8 2.2E-18 7.6E-23 141.8 11.5 104 68-172 4-117 (197)
49 3ztl_A Thioredoxin peroxidase; 99.8 1.8E-18 6.1E-23 145.9 11.2 103 68-172 39-152 (222)
50 3eyt_A Uncharacterized protein 99.8 1.7E-18 5.7E-23 135.9 10.1 107 71-179 2-123 (158)
51 2cvb_A Probable thiol-disulfid 99.8 3.1E-18 1.1E-22 138.9 11.5 109 68-179 6-122 (188)
52 3kij_A Probable glutathione pe 99.8 2.2E-18 7.7E-23 139.7 10.3 96 63-160 6-110 (180)
53 3lwa_A Secreted thiol-disulfid 99.8 8E-18 2.7E-22 135.9 13.4 101 68-170 30-140 (183)
54 3hdc_A Thioredoxin family prot 99.8 2.9E-18 1E-22 135.4 10.5 113 63-179 9-121 (158)
55 2l5o_A Putative thioredoxin; s 99.8 5.3E-18 1.8E-22 132.0 11.8 108 70-179 3-112 (153)
56 2obi_A PHGPX, GPX-4, phospholi 99.8 3.9E-18 1.3E-22 138.4 11.4 105 63-169 15-133 (183)
57 3hcz_A Possible thiol-disulfid 99.8 1.2E-18 4.3E-23 134.1 8.0 110 68-179 4-117 (148)
58 1zye_A Thioredoxin-dependent p 99.8 3E-18 1E-22 144.5 11.0 103 69-172 27-139 (220)
59 2lrt_A Uncharacterized protein 99.8 7.1E-18 2.4E-22 133.2 12.4 108 68-179 8-119 (152)
60 3fkf_A Thiol-disulfide oxidore 99.8 3.8E-18 1.3E-22 131.4 10.3 111 67-179 3-120 (148)
61 3lor_A Thiol-disulfide isomera 99.8 1.9E-18 6.6E-23 135.5 8.7 107 71-179 5-126 (160)
62 3a2v_A Probable peroxiredoxin; 99.8 3.9E-18 1.3E-22 147.9 11.0 103 69-172 5-115 (249)
63 3erw_A Sporulation thiol-disul 99.8 9.8E-18 3.4E-22 128.4 12.0 110 67-179 7-120 (145)
64 2p31_A CL683, glutathione pero 99.7 5.1E-18 1.8E-22 137.8 10.0 94 65-160 19-121 (181)
65 1xvq_A Thiol peroxidase; thior 99.7 3.7E-18 1.3E-22 138.2 8.6 101 69-174 18-120 (175)
66 1xzo_A BSSCO, hypothetical pro 99.7 5.4E-18 1.9E-22 134.9 9.3 102 68-171 6-117 (174)
67 2jsy_A Probable thiol peroxida 99.7 1.9E-18 6.4E-23 137.7 6.4 102 68-173 17-121 (167)
68 2gs3_A PHGPX, GPX-4, phospholi 99.7 1.2E-17 4E-22 136.2 11.2 102 66-169 20-135 (185)
69 3or5_A Thiol:disulfide interch 99.7 2.6E-17 9E-22 129.4 12.9 109 68-179 7-122 (165)
70 1jfu_A Thiol:disulfide interch 99.7 1.3E-17 4.5E-22 134.7 11.4 104 67-172 32-138 (186)
71 3keb_A Probable thiol peroxida 99.7 9.5E-18 3.2E-22 143.6 10.6 99 69-173 22-127 (224)
72 3kh7_A Thiol:disulfide interch 99.7 3.2E-17 1.1E-21 132.8 13.1 109 65-179 26-138 (176)
73 2v1m_A Glutathione peroxidase; 99.7 1.4E-17 4.9E-22 131.6 10.0 94 69-164 5-109 (169)
74 2p5q_A Glutathione peroxidase 99.7 1.7E-17 5.7E-22 131.3 9.9 94 69-164 6-110 (170)
75 2vup_A Glutathione peroxidase- 99.7 1.4E-17 4.9E-22 136.2 9.1 98 65-164 18-126 (190)
76 3ia1_A THIO-disulfide isomeras 99.7 2.5E-17 8.5E-22 128.6 9.2 106 68-179 4-115 (154)
77 4eo3_A Bacterioferritin comigr 99.7 3.1E-17 1.1E-21 146.7 11.0 95 73-172 2-96 (322)
78 2b5x_A YKUV protein, TRXY; thi 99.7 3E-17 1E-21 126.1 9.4 107 70-179 2-116 (148)
79 3ha9_A Uncharacterized thiored 99.7 2.2E-17 7.7E-22 130.7 8.8 106 69-179 11-136 (165)
80 1lu4_A Soluble secreted antige 99.7 9.6E-17 3.3E-21 121.8 11.7 103 73-179 2-105 (136)
81 2k6v_A Putative cytochrome C o 99.7 2.5E-17 8.4E-22 130.6 8.6 101 69-172 10-121 (172)
82 2f8a_A Glutathione peroxidase 99.7 3.2E-17 1.1E-21 137.4 9.6 91 70-162 21-126 (208)
83 2i3y_A Epididymal secretory gl 99.7 3.2E-17 1.1E-21 138.8 9.6 88 72-162 32-134 (215)
84 4evm_A Thioredoxin family prot 99.7 2E-16 6.8E-21 119.0 12.4 103 74-179 1-110 (138)
85 1zzo_A RV1677; thioredoxin fol 99.7 2.1E-16 7.1E-21 119.4 12.1 104 72-179 2-107 (136)
86 2lja_A Putative thiol-disulfid 99.7 1.2E-16 4E-21 124.2 10.7 109 69-179 3-114 (152)
87 2ggt_A SCO1 protein homolog, m 99.7 1.1E-16 3.9E-21 125.8 10.1 100 74-175 2-113 (164)
88 2r37_A Glutathione peroxidase 99.7 6.3E-17 2.2E-21 136.0 9.1 88 72-162 14-116 (207)
89 2ls5_A Uncharacterized protein 99.5 2.5E-18 8.6E-23 135.4 0.0 102 69-172 7-111 (159)
90 3raz_A Thioredoxin-related pro 99.7 1.6E-16 5.6E-21 124.1 10.3 103 74-179 4-111 (151)
91 1i5g_A Tryparedoxin II; electr 99.7 1.3E-16 4.5E-21 123.5 8.7 108 71-180 3-115 (144)
92 2hyx_A Protein DIPZ; thioredox 99.7 2.6E-16 8.8E-21 142.6 11.8 112 66-179 48-170 (352)
93 2rli_A SCO2 protein homolog, m 99.7 7.3E-16 2.5E-20 122.1 12.4 98 76-175 7-116 (171)
94 2b1k_A Thiol:disulfide interch 99.7 1.1E-15 3.8E-20 121.2 13.3 108 65-177 18-129 (168)
95 3dwv_A Glutathione peroxidase- 99.7 1.9E-17 6.4E-22 135.3 3.0 94 69-164 20-124 (187)
96 3me7_A Putative uncharacterize 99.7 3.5E-16 1.2E-20 126.2 10.2 102 69-172 1-116 (170)
97 3cmi_A Peroxiredoxin HYR1; thi 99.6 6.6E-17 2.2E-21 129.5 4.9 88 72-162 9-105 (171)
98 2b7k_A SCO1 protein; metalloch 99.6 5.9E-16 2E-20 128.0 9.7 102 69-172 13-127 (200)
99 1kng_A Thiol:disulfide interch 99.6 7.3E-16 2.5E-20 120.0 9.6 107 66-177 5-121 (156)
100 1o8x_A Tryparedoxin, TRYX, TXN 99.6 7E-16 2.4E-20 119.9 9.2 107 70-179 3-114 (146)
101 2h30_A Thioredoxin, peptide me 99.6 7.5E-16 2.6E-20 121.1 7.0 107 69-179 14-127 (164)
102 1o73_A Tryparedoxin; electron 99.6 1.6E-15 5.5E-20 116.9 7.7 107 70-179 3-114 (144)
103 3s9f_A Tryparedoxin; thioredox 99.6 9.7E-16 3.3E-20 122.9 4.9 108 69-179 22-134 (165)
104 2lus_A Thioredoxion; CR-Trp16, 99.3 2.1E-16 7.1E-21 121.4 0.0 107 73-179 2-114 (143)
105 4hde_A SCO1/SENC family lipopr 99.5 2.6E-14 9E-19 115.6 10.3 93 69-163 6-108 (170)
106 4h86_A Peroxiredoxin type-2; o 98.8 2.4E-08 8.4E-13 83.8 10.6 106 69-174 26-154 (199)
107 2fwh_A Thiol:disulfide interch 98.8 1.5E-09 5E-14 83.5 1.6 93 69-165 4-104 (134)
108 2l57_A Uncharacterized protein 98.7 6.3E-09 2.1E-13 78.4 3.8 87 73-165 4-95 (126)
109 3hxs_A Thioredoxin, TRXP; elec 98.7 1.3E-08 4.6E-13 77.9 4.5 84 79-165 35-118 (141)
110 3ul3_B Thioredoxin, thioredoxi 98.6 4.2E-08 1.4E-12 74.4 4.0 68 70-142 19-86 (128)
111 2ju5_A Thioredoxin disulfide i 98.5 2.4E-08 8.2E-13 78.7 2.4 92 70-167 25-131 (154)
112 2dml_A Protein disulfide-isome 98.4 3.9E-07 1.3E-11 68.5 6.5 68 96-164 34-101 (130)
113 3f9u_A Putative exported cytoc 98.4 1.4E-07 5E-12 74.8 4.0 45 96-141 46-93 (172)
114 2f51_A Thioredoxin; electron t 98.4 2.1E-08 7.2E-13 75.4 -1.1 77 80-161 5-85 (118)
115 3p2a_A Thioredoxin 2, putative 98.4 1.4E-07 4.6E-12 73.2 2.7 71 70-143 30-100 (148)
116 3fk8_A Disulphide isomerase; A 98.4 3.8E-07 1.3E-11 69.1 5.2 69 97-166 29-105 (133)
117 2dj1_A Protein disulfide-isome 98.4 3.6E-07 1.2E-11 69.6 5.0 60 80-141 19-80 (140)
118 1z6n_A Hypothetical protein PA 98.4 8.3E-08 2.9E-12 77.8 1.2 69 96-166 53-124 (167)
119 3gix_A Thioredoxin-like protei 98.3 5.2E-07 1.8E-11 71.0 5.3 99 96-198 22-126 (149)
120 2l5l_A Thioredoxin; structural 98.3 7.8E-07 2.7E-11 68.1 6.0 66 96-165 37-105 (136)
121 3f3q_A Thioredoxin-1; His TAG, 98.3 1.8E-07 6.1E-12 69.1 2.1 70 90-161 17-86 (109)
122 4euy_A Uncharacterized protein 98.3 5.5E-07 1.9E-11 65.6 3.9 68 90-160 11-79 (105)
123 1sen_A Thioredoxin-like protei 98.3 3E-08 1E-12 79.3 -3.2 88 75-166 27-117 (164)
124 2dj3_A Protein disulfide-isome 98.2 3.5E-07 1.2E-11 69.0 2.5 82 79-164 8-93 (133)
125 1x5e_A Thioredoxin domain cont 98.2 6.5E-07 2.2E-11 67.2 3.9 43 100-142 25-67 (126)
126 3aps_A DNAJ homolog subfamily 98.2 9.6E-07 3.3E-11 65.6 4.7 68 95-166 19-89 (122)
127 2pu9_C TRX-F, thioredoxin F-ty 98.2 2.3E-06 7.8E-11 62.6 6.3 64 97-164 24-89 (111)
128 1x5d_A Protein disulfide-isome 98.2 1.2E-06 4E-11 65.8 4.3 67 96-163 24-94 (133)
129 2j23_A Thioredoxin; immune pro 98.2 2.5E-07 8.7E-12 69.5 0.6 48 95-142 31-78 (121)
130 1xfl_A Thioredoxin H1; AT3G510 98.2 4.2E-06 1.5E-10 63.2 7.4 43 97-141 38-80 (124)
131 3die_A Thioredoxin, TRX; elect 98.2 1.4E-06 4.9E-11 62.5 4.2 47 96-143 18-64 (106)
132 3d6i_A Monothiol glutaredoxin- 98.2 1.3E-06 4.4E-11 64.0 3.9 46 97-142 21-66 (112)
133 3qfa_C Thioredoxin; protein-pr 98.2 1.1E-06 3.7E-11 65.6 3.4 45 96-142 30-74 (116)
134 1nsw_A Thioredoxin, TRX; therm 98.1 6E-07 2E-11 64.7 1.8 47 94-141 14-60 (105)
135 1ep7_A Thioredoxin CH1, H-type 98.1 3.5E-06 1.2E-10 61.3 6.0 45 97-142 24-68 (112)
136 2voc_A Thioredoxin; electron t 98.1 5.9E-06 2E-10 60.8 6.7 45 96-141 16-60 (112)
137 1faa_A Thioredoxin F; electron 98.1 4.4E-06 1.5E-10 62.2 6.0 41 97-139 37-77 (124)
138 1t00_A Thioredoxin, TRX; redox 98.1 2.6E-06 9E-11 62.1 4.5 45 96-141 22-66 (112)
139 2djj_A PDI, protein disulfide- 98.1 2.5E-06 8.5E-11 63.1 4.3 81 80-164 9-93 (121)
140 1dby_A Chloroplast thioredoxin 98.1 4E-06 1.4E-10 60.5 5.3 46 96-142 18-63 (107)
141 2e0q_A Thioredoxin; electron t 98.1 1.1E-05 3.9E-10 57.1 7.5 45 96-142 15-59 (104)
142 2vim_A Thioredoxin, TRX; thior 98.1 2.4E-06 8.2E-11 61.1 3.9 45 96-142 18-62 (104)
143 2vlu_A Thioredoxin, thioredoxi 98.1 4.3E-07 1.5E-11 67.5 -0.1 68 72-141 9-76 (122)
144 1qgv_A Spliceosomal protein U5 98.1 1.4E-06 4.9E-11 67.9 2.6 70 97-170 23-95 (142)
145 3emx_A Thioredoxin; structural 98.1 2.3E-06 8E-11 65.5 3.6 53 99-154 33-91 (135)
146 3h79_A Thioredoxin-like protei 98.1 1E-05 3.5E-10 60.8 7.1 65 96-163 32-103 (127)
147 3m9j_A Thioredoxin; oxidoreduc 98.1 2.4E-06 8.2E-11 61.3 3.4 46 96-143 19-64 (105)
148 3cxg_A Putative thioredoxin; m 98.1 9.5E-07 3.3E-11 67.8 1.3 43 97-142 40-82 (133)
149 3d22_A TRXH4, thioredoxin H-ty 98.0 1.1E-05 3.6E-10 61.4 7.2 53 97-154 46-98 (139)
150 1w4v_A Thioredoxin, mitochondr 98.0 7.4E-06 2.5E-10 61.0 6.1 46 96-142 30-75 (119)
151 3idv_A Protein disulfide-isome 98.0 3.8E-06 1.3E-10 69.3 4.6 59 93-154 28-88 (241)
152 1wou_A Thioredoxin -related pr 98.0 1.4E-05 4.6E-10 60.2 7.3 66 97-177 24-96 (123)
153 1ti3_A Thioredoxin H, PTTRXH1; 98.0 5.6E-06 1.9E-10 60.2 4.9 60 97-159 26-86 (113)
154 2i4a_A Thioredoxin; acidophIle 98.0 7.4E-06 2.5E-10 58.8 5.4 45 96-141 19-63 (107)
155 2yzu_A Thioredoxin; redox prot 98.0 2.3E-06 7.8E-11 61.5 2.7 46 96-142 17-62 (109)
156 2wz9_A Glutaredoxin-3; protein 98.0 8.2E-06 2.8E-10 63.7 6.0 65 97-164 32-96 (153)
157 1thx_A Thioredoxin, thioredoxi 98.0 8E-06 2.7E-10 59.4 5.5 46 96-142 24-69 (115)
158 2dj0_A Thioredoxin-related tra 98.0 2.1E-06 7E-11 65.7 2.0 53 98-153 27-79 (137)
159 1zma_A Bacterocin transport ac 98.0 1.8E-05 6.2E-10 58.5 7.1 56 96-154 28-86 (118)
160 3tco_A Thioredoxin (TRXA-1); d 98.0 6.7E-06 2.3E-10 59.1 4.6 47 96-143 20-66 (109)
161 2oe3_A Thioredoxin-3; electron 98.0 3.7E-06 1.3E-10 62.6 3.3 44 96-141 29-72 (114)
162 1gh2_A Thioredoxin-like protei 98.0 5.4E-06 1.8E-10 60.2 4.1 44 96-141 20-63 (107)
163 1syr_A Thioredoxin; SGPP, stru 98.0 6.3E-06 2.2E-10 60.5 4.4 45 96-142 25-69 (112)
164 2trx_A Thioredoxin; electron t 98.0 8.6E-06 2.9E-10 58.8 5.0 46 95-141 18-63 (108)
165 2o8v_B Thioredoxin 1; disulfid 98.0 1E-05 3.5E-10 61.5 5.6 46 95-141 38-83 (128)
166 3gnj_A Thioredoxin domain prot 98.0 6.7E-06 2.3E-10 59.5 4.3 46 96-142 21-66 (111)
167 3uvt_A Thioredoxin domain-cont 98.0 3.6E-06 1.2E-10 60.9 2.9 46 97-142 21-68 (111)
168 2yj7_A LPBCA thioredoxin; oxid 97.2 1.1E-06 3.7E-11 62.8 0.0 46 95-141 17-62 (106)
169 3gyk_A 27KDA outer membrane pr 98.0 1.3E-05 4.6E-10 63.4 6.5 48 85-136 12-59 (175)
170 2ppt_A Thioredoxin-2; thiredox 97.9 1.1E-06 3.6E-11 69.5 -0.2 49 92-141 59-107 (155)
171 1xwb_A Thioredoxin; dimerizati 97.9 7.2E-06 2.5E-10 58.8 4.2 46 96-142 19-64 (106)
172 1fb6_A Thioredoxin M; electron 97.9 7.4E-06 2.5E-10 58.6 4.1 45 96-141 17-61 (105)
173 2vm1_A Thioredoxin, thioredoxi 97.9 6.2E-06 2.1E-10 60.4 3.5 43 97-141 28-70 (118)
174 2kuc_A Putative disulphide-iso 97.9 9.7E-06 3.3E-10 60.7 4.7 67 97-165 27-99 (130)
175 3hz4_A Thioredoxin; NYSGXRC, P 97.9 9.3E-06 3.2E-10 62.4 4.4 46 96-142 23-68 (140)
176 3q6o_A Sulfhydryl oxidase 1; p 97.9 2E-05 6.9E-10 66.0 6.9 66 96-162 29-99 (244)
177 1r26_A Thioredoxin; redox-acti 97.9 1.3E-05 4.4E-10 60.9 5.0 46 95-142 35-80 (125)
178 2i1u_A Thioredoxin, TRX, MPT46 97.9 1.2E-05 4E-10 59.3 4.6 45 96-141 29-73 (121)
179 2xc2_A Thioredoxinn; oxidoredu 97.9 6.6E-06 2.2E-10 60.8 3.2 44 96-142 32-75 (117)
180 3zzx_A Thioredoxin; oxidoreduc 97.9 2.3E-05 7.8E-10 58.2 6.1 43 97-141 20-62 (105)
181 3qou_A Protein YBBN; thioredox 97.8 5.1E-06 1.7E-10 70.9 2.3 45 97-142 26-70 (287)
182 1v98_A Thioredoxin; oxidoreduc 97.8 1.5E-05 5.3E-10 60.8 4.5 45 96-142 50-94 (140)
183 2lst_A Thioredoxin; structural 97.0 3.1E-06 1.1E-10 63.6 0.0 77 85-165 9-92 (130)
184 1nho_A Probable thioredoxin; b 97.8 1.5E-05 5.1E-10 55.0 3.5 52 99-154 3-54 (85)
185 3ira_A Conserved protein; meth 97.8 3E-05 1E-09 63.3 5.5 70 97-167 39-119 (173)
186 3dxb_A Thioredoxin N-terminall 97.8 6.9E-06 2.4E-10 68.2 1.6 47 95-142 28-74 (222)
187 1fo5_A Thioredoxin; disulfide 97.7 1.6E-05 5.6E-10 54.8 3.0 43 98-141 3-45 (85)
188 2l6c_A Thioredoxin; oxidoreduc 97.7 1.3E-05 4.5E-10 58.9 2.3 44 96-141 18-61 (110)
189 3t58_A Sulfhydryl oxidase 1; o 97.7 8.3E-05 2.8E-09 70.2 8.1 66 95-161 28-98 (519)
190 3ed3_A Protein disulfide-isome 97.7 5.3E-05 1.8E-09 66.2 6.1 73 96-170 34-109 (298)
191 3apq_A DNAJ homolog subfamily 97.6 6.3E-05 2.1E-09 61.6 5.9 55 96-154 113-167 (210)
192 1a8l_A Protein disulfide oxido 97.6 7.3E-05 2.5E-09 61.2 5.6 46 96-141 133-181 (226)
193 1eej_A Thiol:disulfide interch 97.6 8.7E-05 3E-09 61.6 6.1 86 88-179 79-187 (216)
194 3ph9_A Anterior gradient prote 97.5 7.3E-05 2.5E-09 59.5 4.6 99 97-200 44-145 (151)
195 3hd5_A Thiol:disulfide interch 97.5 0.00018 6.3E-09 57.9 6.8 43 96-139 24-66 (195)
196 2av4_A Thioredoxin-like protei 97.5 5.1E-05 1.8E-09 61.5 3.4 100 96-200 40-146 (160)
197 2dbc_A PDCL2, unnamed protein 97.5 0.00018 6.1E-09 55.0 6.1 42 98-141 31-72 (135)
198 3qcp_A QSOX from trypanosoma b 97.5 0.00016 5.4E-09 67.7 6.7 62 98-162 43-114 (470)
199 1wmj_A Thioredoxin H-type; str 97.5 8.3E-06 2.8E-10 60.8 -1.8 43 97-141 36-78 (130)
200 1ilo_A Conserved hypothetical 97.5 0.00025 8.6E-09 48.0 6.0 36 101-137 3-38 (77)
201 1mek_A Protein disulfide isome 97.4 4.4E-05 1.5E-09 55.5 1.5 45 96-140 23-69 (120)
202 3kp8_A Vkorc1/thioredoxin doma 97.4 5.7E-05 2E-09 56.1 1.8 30 98-127 13-42 (106)
203 3h93_A Thiol:disulfide interch 97.3 0.00039 1.3E-08 55.8 6.5 40 96-136 24-63 (192)
204 2b5e_A Protein disulfide-isome 97.3 0.00017 5.8E-09 66.5 4.9 60 94-156 28-88 (504)
205 2hls_A Protein disulfide oxido 97.3 0.00035 1.2E-08 59.1 6.3 46 96-141 137-185 (243)
206 2r2j_A Thioredoxin domain-cont 97.3 0.00047 1.6E-08 61.6 7.5 57 95-154 20-81 (382)
207 3idv_A Protein disulfide-isome 97.3 0.00029 9.8E-09 57.8 5.1 57 95-154 145-203 (241)
208 2znm_A Thiol:disulfide interch 97.2 0.0002 6.9E-09 57.5 3.2 83 96-179 21-156 (195)
209 3f8u_A Protein disulfide-isome 97.2 0.00013 4.3E-09 66.8 2.1 45 97-141 370-415 (481)
210 1a0r_P Phosducin, MEKA, PP33; 97.1 0.00021 7.1E-09 61.3 3.2 42 97-140 133-174 (245)
211 2ywm_A Glutaredoxin-like prote 97.1 0.00045 1.6E-08 56.7 5.2 56 96-156 135-191 (229)
212 3uem_A Protein disulfide-isome 97.1 0.00041 1.4E-08 61.0 5.1 46 96-141 266-312 (361)
213 2es7_A Q8ZP25_salty, putative 97.1 0.00014 4.8E-09 56.9 1.6 69 90-164 27-102 (142)
214 1oaz_A Thioredoxin 1; immune s 97.1 0.00025 8.6E-09 53.4 2.8 46 95-141 19-78 (123)
215 1sji_A Calsequestrin 2, calseq 97.0 0.0002 7E-09 63.1 2.2 57 94-154 25-88 (350)
216 2rem_A Disulfide oxidoreductas 97.0 0.0012 4.2E-08 52.6 6.6 40 96-136 24-63 (193)
217 1z6m_A Conserved hypothetical 97.0 0.0036 1.2E-07 49.2 9.1 47 88-136 20-67 (175)
218 1h75_A Glutaredoxin-like prote 96.9 0.0028 9.6E-08 43.4 6.5 53 101-160 3-56 (81)
219 3f8u_A Protein disulfide-isome 96.9 0.00052 1.8E-08 62.7 3.4 53 98-154 22-74 (481)
220 1t3b_A Thiol:disulfide interch 96.8 0.0016 5.4E-08 53.8 5.7 80 96-179 85-187 (211)
221 1a8l_A Protein disulfide oxido 96.8 0.0031 1.1E-07 51.3 7.5 56 96-154 21-77 (226)
222 3iv4_A Putative oxidoreductase 96.8 0.00068 2.3E-08 51.7 3.1 58 94-154 21-79 (112)
223 3apo_A DNAJ homolog subfamily 96.8 0.00081 2.8E-08 65.3 4.3 47 96-143 674-720 (780)
224 3apo_A DNAJ homolog subfamily 96.7 0.0018 6.1E-08 62.9 6.4 47 97-144 455-501 (780)
225 3evi_A Phosducin-like protein 96.7 0.0021 7.2E-08 48.7 5.1 40 99-140 25-64 (118)
226 1r7h_A NRDH-redoxin; thioredox 96.7 0.0047 1.6E-07 41.3 6.3 53 101-160 3-56 (75)
227 3ga4_A Dolichyl-diphosphooligo 96.6 0.0059 2E-07 49.9 7.5 55 97-154 37-102 (178)
228 1ego_A Glutaredoxin; electron 96.5 0.0025 8.4E-08 43.9 4.3 56 101-158 3-62 (85)
229 2e7p_A Glutaredoxin; thioredox 96.5 0.0015 5.2E-08 47.7 3.3 57 95-158 18-77 (116)
230 2b5e_A Protein disulfide-isome 96.5 0.003 1E-07 58.2 5.6 44 96-139 375-420 (504)
231 2ywm_A Glutaredoxin-like prote 96.5 0.0069 2.4E-07 49.5 7.2 56 96-154 20-80 (229)
232 2k8s_A Thioredoxin; dimer, str 96.5 0.0023 8E-08 44.2 3.7 36 101-139 4-39 (80)
233 2trc_P Phosducin, MEKA, PP33; 96.4 0.0028 9.4E-08 52.9 4.5 40 98-139 121-160 (217)
234 1wjk_A C330018D20RIK protein; 96.4 0.0031 1.1E-07 46.0 4.2 67 85-158 4-70 (100)
235 2qgv_A Hydrogenase-1 operon pr 96.3 0.0013 4.6E-08 51.9 1.6 52 99-153 36-89 (140)
236 2qsi_A Putative hydrogenase ex 96.2 0.0092 3.1E-07 46.9 6.4 44 97-141 33-78 (137)
237 3us3_A Calsequestrin-1; calciu 96.2 0.0069 2.4E-07 53.9 6.4 56 96-154 29-90 (367)
238 2fgx_A Putative thioredoxin; N 96.2 0.0071 2.4E-07 45.4 5.4 53 99-158 30-83 (107)
239 1v58_A Thiol:disulfide interch 96.1 0.018 6.2E-07 48.3 7.9 46 86-136 88-133 (241)
240 3l78_A Regulatory protein SPX; 95.7 0.026 8.9E-07 42.7 6.6 66 101-173 2-71 (120)
241 2klx_A Glutaredoxin; thioredox 95.7 0.037 1.3E-06 38.6 6.9 52 101-160 8-61 (89)
242 1ttz_A Conserved hypothetical 95.5 0.016 5.5E-07 41.5 4.4 49 101-159 3-52 (87)
243 1fov_A Glutaredoxin 3, GRX3; a 95.3 0.049 1.7E-06 36.8 6.3 53 101-160 3-57 (82)
244 1kte_A Thioltransferase; redox 95.2 0.019 6.3E-07 41.2 4.2 56 101-158 14-72 (105)
245 3fz4_A Putative arsenate reduc 95.1 0.057 1.9E-06 41.0 6.7 68 100-174 4-75 (120)
246 2dlx_A UBX domain-containing p 95.1 0.067 2.3E-06 42.3 7.4 88 97-193 42-136 (153)
247 1wik_A Thioredoxin-like protei 95.1 0.084 2.9E-06 38.6 7.5 57 94-158 12-74 (109)
248 3hz8_A Thiol:disulfide interch 95.0 0.021 7E-07 46.2 4.3 41 96-137 23-63 (193)
249 3c1r_A Glutaredoxin-1; oxidize 95.0 0.042 1.4E-06 41.1 5.8 50 101-157 27-85 (118)
250 3gkx_A Putative ARSC family re 95.0 0.042 1.4E-06 41.7 5.8 66 101-173 6-75 (120)
251 2yan_A Glutaredoxin-3; oxidore 95.0 0.059 2E-06 39.1 6.3 56 95-158 15-76 (105)
252 1z3e_A Regulatory protein SPX; 95.0 0.081 2.8E-06 40.5 7.3 65 101-172 3-71 (132)
253 3rdw_A Putative arsenate reduc 95.0 0.068 2.3E-06 40.6 6.8 66 101-173 7-77 (121)
254 2khp_A Glutaredoxin; thioredox 94.9 0.08 2.7E-06 36.9 6.7 53 101-160 8-62 (92)
255 3f0i_A Arsenate reductase; str 94.9 0.07 2.4E-06 40.4 6.8 66 101-173 6-76 (119)
256 2hze_A Glutaredoxin-1; thiored 94.9 0.044 1.5E-06 40.4 5.5 51 101-158 21-79 (114)
257 1hyu_A AHPF, alkyl hydroperoxi 94.9 0.028 9.7E-07 52.2 5.4 43 97-141 117-159 (521)
258 1aba_A Glutaredoxin; electron 94.7 0.13 4.3E-06 35.9 7.3 52 101-159 2-69 (87)
259 3qmx_A Glutaredoxin A, glutare 94.7 0.079 2.7E-06 38.4 6.2 52 100-158 17-71 (99)
260 3rhb_A ATGRXC5, glutaredoxin-C 94.6 0.07 2.4E-06 39.0 5.9 51 101-158 21-77 (113)
261 3ic4_A Glutaredoxin (GRX-1); s 94.6 0.095 3.2E-06 36.5 6.3 56 101-161 14-74 (92)
262 3dml_A Putative uncharacterize 94.5 0.017 5.8E-07 44.0 2.4 43 98-140 19-62 (116)
263 1s3c_A Arsenate reductase; ARS 94.5 0.065 2.2E-06 41.8 5.8 67 101-174 4-74 (141)
264 3l9v_A Putative thiol-disulfid 94.2 0.031 1.1E-06 44.9 3.6 39 96-136 14-55 (189)
265 2cq9_A GLRX2 protein, glutared 94.2 0.11 3.6E-06 39.4 6.3 49 104-159 32-85 (130)
266 2lqo_A Putative glutaredoxin R 94.1 0.067 2.3E-06 38.7 4.8 51 101-158 6-59 (92)
267 3ctg_A Glutaredoxin-2; reduced 94.0 0.097 3.3E-06 39.8 5.8 51 101-158 39-98 (129)
268 3msz_A Glutaredoxin 1; alpha-b 93.9 0.17 5.9E-06 34.5 6.5 54 100-160 5-67 (89)
269 2wci_A Glutaredoxin-4; redox-a 93.8 0.12 4.2E-06 40.0 6.1 55 100-161 37-98 (135)
270 3uem_A Protein disulfide-isome 93.7 0.11 3.6E-06 45.3 6.3 56 97-154 135-190 (361)
271 2djk_A PDI, protein disulfide- 93.5 0.094 3.2E-06 39.4 4.9 44 96-141 22-65 (133)
272 3h8q_A Thioredoxin reductase 3 93.4 0.23 7.8E-06 36.6 6.7 51 103-160 21-77 (114)
273 3nzn_A Glutaredoxin; structura 93.3 0.29 9.9E-06 35.1 7.1 56 100-160 23-83 (103)
274 2ht9_A Glutaredoxin-2; thiored 93.1 0.18 6E-06 39.3 5.9 49 104-159 54-107 (146)
275 1un2_A DSBA, thiol-disulfide i 93.1 0.024 8.3E-07 46.4 0.9 40 98-138 114-156 (197)
276 3kp9_A Vkorc1/thioredoxin doma 92.9 0.024 8.1E-07 49.8 0.7 26 101-126 201-226 (291)
277 2qc7_A ERP31, ERP28, endoplasm 92.9 0.073 2.5E-06 45.1 3.7 56 95-154 20-80 (240)
278 3gx8_A Monothiol glutaredoxin- 92.8 0.26 8.8E-06 37.1 6.3 56 99-161 17-82 (121)
279 2wem_A Glutaredoxin-related pr 92.7 0.27 9.1E-06 37.0 6.3 56 99-161 21-84 (118)
280 3zyw_A Glutaredoxin-3; metal b 92.5 0.24 8.4E-06 36.6 5.8 60 94-161 13-79 (111)
281 3ipz_A Monothiol glutaredoxin- 92.3 0.34 1.2E-05 35.5 6.3 56 99-161 19-81 (109)
282 2c0g_A ERP29 homolog, windbeut 92.3 0.26 8.9E-06 41.9 6.4 56 95-154 31-92 (248)
283 2kok_A Arsenate reductase; bru 92.0 0.47 1.6E-05 35.5 6.9 64 101-173 7-74 (120)
284 1rw1_A Conserved hypothetical 91.9 0.16 5.4E-06 37.8 4.1 64 101-173 2-69 (114)
285 3feu_A Putative lipoprotein; a 91.3 0.1 3.5E-06 41.8 2.6 28 99-126 24-51 (185)
286 1t1v_A SH3BGRL3, SH3 domain-bi 91.1 0.66 2.3E-05 32.6 6.5 59 101-160 4-67 (93)
287 2ct6_A SH3 domain-binding glut 91.0 0.81 2.8E-05 33.5 7.2 49 101-150 10-59 (111)
288 3gv1_A Disulfide interchange p 90.6 0.28 9.6E-06 38.2 4.5 28 95-122 12-39 (147)
289 3gn3_A Putative protein-disulf 89.0 0.33 1.1E-05 38.9 3.9 42 95-136 12-53 (182)
290 4dvc_A Thiol:disulfide interch 88.9 0.73 2.5E-05 35.5 5.7 38 96-135 21-58 (184)
291 1pn0_A Phenol 2-monooxygenase; 88.2 1.5 5.1E-05 42.0 8.4 115 68-182 478-622 (665)
292 3c7m_A Thiol:disulfide interch 87.9 0.83 2.8E-05 35.7 5.5 39 98-137 18-57 (195)
293 2wul_A Glutaredoxin related pr 87.7 2.2 7.4E-05 32.2 7.5 57 99-162 21-85 (118)
294 3l9s_A Thiol:disulfide interch 86.4 0.51 1.8E-05 37.9 3.5 38 98-136 22-62 (191)
295 3bci_A Disulfide bond protein 86.0 1.1 3.8E-05 35.0 5.3 41 96-136 10-52 (186)
296 2dkh_A 3-hydroxybenzoate hydro 85.5 0.89 3E-05 43.2 5.2 113 69-182 467-614 (639)
297 3tdg_A DSBG, putative uncharac 84.9 0.95 3.3E-05 39.2 4.6 39 97-138 147-185 (273)
298 3l4n_A Monothiol glutaredoxin- 83.8 3.4 0.00012 31.2 6.9 59 101-161 16-78 (127)
299 2hls_A Protein disulfide oxido 83.8 1.3 4.4E-05 36.8 4.9 55 96-154 25-85 (243)
300 3gha_A Disulfide bond formatio 82.3 1.8 6E-05 35.0 5.0 41 96-136 28-70 (202)
301 3f4s_A Alpha-DSBA1, putative u 81.6 2.1 7.2E-05 35.4 5.4 47 88-136 32-80 (226)
302 3gmf_A Protein-disulfide isome 81.0 2.1 7.3E-05 34.8 5.1 48 87-136 7-56 (205)
303 2ec4_A FAS-associated factor 1 79.1 4.5 0.00016 32.4 6.4 100 95-197 53-172 (178)
304 1u6t_A SH3 domain-binding glut 79.0 6.1 0.00021 29.9 6.7 51 100-151 1-52 (121)
305 1nm3_A Protein HI0572; hybrid, 77.7 3 0.0001 34.0 5.0 54 100-160 171-225 (241)
306 2in3_A Hypothetical protein; D 74.9 11 0.00037 29.7 7.6 38 98-136 7-44 (216)
307 4f9z_D Endoplasmic reticulum r 70.8 8.7 0.0003 31.0 6.2 43 97-140 131-173 (227)
308 2axo_A Hypothetical protein AT 69.5 21 0.00072 30.6 8.5 37 98-137 43-79 (270)
309 3j21_Z 50S ribosomal protein L 64.7 11 0.00039 26.9 5.1 54 122-175 23-80 (99)
310 1w41_A 50S ribosomal protein L 61.4 16 0.00054 26.2 5.3 52 123-174 25-80 (101)
311 3kzq_A Putative uncharacterize 59.4 13 0.00043 29.5 4.9 36 100-136 4-39 (208)
312 3iz5_H 60S ribosomal protein L 59.4 29 0.00099 29.7 7.3 97 119-216 132-235 (258)
313 2x8g_A Thioredoxin glutathione 58.3 13 0.00043 34.6 5.4 21 101-121 20-40 (598)
314 4a17_F RPL7A, 60S ribosomal pr 57.6 38 0.0013 28.9 7.7 81 119-200 129-216 (255)
315 2jad_A Yellow fluorescent prot 56.3 3.4 0.00012 37.1 1.1 59 100-161 263-326 (362)
316 2p9j_A Hypothetical protein AQ 55.5 22 0.00075 26.4 5.5 67 77-154 10-76 (162)
317 3izc_H 60S ribosomal protein R 55.5 45 0.0015 28.5 7.9 96 120-216 137-239 (256)
318 3ihg_A RDME; flavoenzyme, anth 54.7 34 0.0012 31.0 7.6 88 67-182 418-507 (535)
319 4gxt_A A conserved functionall 51.1 13 0.00045 33.1 4.1 40 116-155 223-262 (385)
320 3v7q_A Probable ribosomal prot 50.5 55 0.0019 23.3 6.8 51 123-174 28-82 (101)
321 3ghf_A Septum site-determining 50.4 17 0.00058 27.2 4.0 39 117-155 61-99 (120)
322 3mmz_A Putative HAD family hyd 49.3 21 0.00073 27.4 4.6 65 77-154 13-79 (176)
323 1k1e_A Deoxy-D-mannose-octulos 49.2 27 0.00092 26.7 5.2 34 121-154 42-75 (180)
324 3umv_A Deoxyribodipyrimidine p 49.0 56 0.0019 30.3 8.1 62 97-160 68-136 (506)
325 2xry_A Deoxyribodipyrimidine p 49.0 67 0.0023 29.2 8.6 75 97-172 67-155 (482)
326 1s2w_A Phosphoenolpyruvate pho 49.0 70 0.0024 27.5 8.3 60 116-175 169-236 (295)
327 3u5e_c L32, RP73, YL38, 60S ri 48.7 24 0.00082 25.5 4.5 53 123-175 31-87 (105)
328 3cpq_A 50S ribosomal protein L 48.2 34 0.0012 24.8 5.4 53 123-175 30-86 (110)
329 4as2_A Phosphorylcholine phosp 48.1 14 0.00049 32.2 3.8 35 117-151 146-180 (327)
330 1xbi_A 50S ribosomal protein L 47.4 63 0.0022 23.8 6.8 52 122-174 37-93 (120)
331 4a18_G RPL30; ribosome, eukary 46.1 32 0.0011 24.8 4.8 53 123-175 31-87 (104)
332 3iz5_f 60S ribosomal protein L 44.6 42 0.0014 24.7 5.4 52 123-174 35-90 (112)
333 1l6r_A Hypothetical protein TA 44.1 50 0.0017 26.3 6.3 40 119-158 27-66 (227)
334 3v7e_A Ribosome-associated pro 43.9 43 0.0015 23.0 5.1 53 122-175 19-75 (82)
335 3on1_A BH2414 protein; structu 42.4 88 0.003 22.1 7.5 50 123-173 27-80 (101)
336 2zkr_f 60S ribosomal protein L 42.1 46 0.0016 28.5 5.9 52 123-175 144-200 (266)
337 2obb_A Hypothetical protein; s 41.4 36 0.0012 26.1 4.7 42 119-160 29-73 (142)
338 3fvv_A Uncharacterized protein 40.9 53 0.0018 25.3 5.8 36 119-154 97-132 (232)
339 1dnp_A DNA photolyase; DNA rep 40.9 60 0.0021 29.6 6.9 63 97-160 28-102 (471)
340 1sji_A Calsequestrin 2, calseq 39.9 82 0.0028 26.7 7.3 64 98-161 246-315 (350)
341 2wq7_A RE11660P; lyase-DNA com 39.5 52 0.0018 30.6 6.3 45 115-160 87-131 (543)
342 3hug_B Probable conserved memb 37.5 18 0.00062 26.9 2.3 23 107-129 52-74 (108)
343 2fc3_A 50S ribosomal protein L 37.1 1.2E+02 0.0042 22.2 7.4 50 124-174 38-92 (124)
344 3lye_A Oxaloacetate acetyl hyd 36.0 1.8E+02 0.0063 25.1 8.9 75 99-175 162-245 (307)
345 2j07_A Deoxyribodipyrimidine p 35.2 61 0.0021 29.0 5.9 56 115-171 50-114 (420)
346 2ze3_A DFA0005; organic waste 34.9 1.7E+02 0.0057 24.8 8.4 61 115-175 166-230 (275)
347 2gjf_A Designed protein; proca 34.7 33 0.0011 23.0 3.2 28 133-160 50-77 (78)
348 3mpo_A Predicted hydrolase of 33.8 84 0.0029 25.2 6.1 58 77-155 6-63 (279)
349 2aif_A Ribosomal protein L7A; 33.4 87 0.003 23.6 5.7 51 124-175 51-106 (135)
350 1rlg_A 50S ribosomal protein L 32.4 1.4E+02 0.0049 21.6 7.8 50 124-174 37-91 (119)
351 3ibs_A Conserved hypothetical 31.8 91 0.0031 24.0 5.9 23 119-141 128-150 (218)
352 2imf_A HCCA isomerase, 2-hydro 31.2 67 0.0023 25.0 4.9 32 101-135 3-34 (203)
353 3eoo_A Methylisocitrate lyase; 31.0 1.8E+02 0.0062 25.0 8.0 75 100-176 156-238 (298)
354 3pe6_A Monoglyceride lipase; a 30.6 97 0.0033 23.8 5.8 58 76-138 17-77 (303)
355 2fpr_A Histidine biosynthesis 30.5 44 0.0015 25.5 3.7 40 117-156 45-99 (176)
356 2pib_A Phosphorylated carbohyd 30.3 80 0.0027 23.3 5.1 59 121-179 91-163 (216)
357 3ih1_A Methylisocitrate lyase; 30.3 2.1E+02 0.0073 24.6 8.4 60 116-175 174-241 (305)
358 2hjp_A Phosphonopyruvate hydro 30.1 1.4E+02 0.0048 25.5 7.1 59 116-174 165-232 (290)
359 2xzm_U Ribosomal protein L7AE 30.0 1.2E+02 0.0041 22.6 5.9 48 123-171 33-85 (126)
360 1owl_A Photolyase, deoxyribodi 29.6 73 0.0025 29.1 5.5 46 115-161 55-100 (484)
361 3hju_A Monoglyceride lipase; a 29.4 1.2E+02 0.0041 24.3 6.5 60 74-138 33-95 (342)
362 2lbw_A H/ACA ribonucleoprotein 29.3 1.4E+02 0.0048 21.9 6.2 52 123-175 29-85 (121)
363 1u3d_A Cryptochrome 1 apoprote 29.2 95 0.0032 28.4 6.3 45 115-160 63-108 (509)
364 1vq8_F 50S ribosomal protein L 29.2 1.7E+02 0.0056 21.3 7.0 51 123-174 38-93 (120)
365 2q1z_B Anti-sigma factor CHRR, 28.4 34 0.0012 27.3 2.7 21 107-127 33-53 (195)
366 1zlp_A PSR132, petal death pro 28.2 1.9E+02 0.0065 25.1 7.7 58 116-175 188-255 (318)
367 1np7_A DNA photolyase; protein 27.9 67 0.0023 29.3 5.0 45 115-160 63-107 (489)
368 2gmw_A D,D-heptose 1,7-bisphos 27.7 87 0.003 24.4 5.1 40 117-156 53-107 (211)
369 1wr8_A Phosphoglycolate phosph 27.0 1.2E+02 0.0041 23.8 5.9 62 77-159 4-65 (231)
370 1xg4_A Probable methylisocitra 26.6 2.6E+02 0.0088 23.9 8.2 60 116-175 166-233 (295)
371 3e58_A Putative beta-phosphogl 26.1 87 0.003 23.1 4.6 36 119-154 94-129 (214)
372 2j4d_A Cryptochrome 3, cryptoc 26.0 80 0.0027 29.2 5.1 45 115-160 98-142 (525)
373 3vi6_A 60S ribosomal protein L 25.9 97 0.0033 23.1 4.8 53 123-175 36-92 (125)
374 2ale_A SNU13, NHP2/L7AE family 25.7 94 0.0032 23.5 4.7 51 123-174 41-96 (134)
375 3nuq_A Protein SSM1, putative 25.3 2.3E+02 0.0077 22.5 7.4 63 118-180 146-229 (282)
376 2qiw_A PEP phosphonomutase; st 25.3 2.3E+02 0.0077 23.7 7.5 60 116-175 167-234 (255)
377 2e0i_A 432AA long hypothetical 24.9 1.3E+02 0.0043 27.2 6.2 64 96-162 26-98 (440)
378 2wm8_A MDP-1, magnesium-depend 24.9 68 0.0023 24.3 3.9 63 117-179 71-143 (187)
379 1nnl_A L-3-phosphoserine phosp 24.6 58 0.002 25.0 3.4 35 121-155 93-127 (225)
380 1vjq_A Designed protein; struc 24.1 51 0.0017 22.0 2.6 29 133-161 42-70 (79)
381 4fb5_A Probable oxidoreductase 23.8 67 0.0023 27.3 3.9 47 108-154 32-80 (393)
382 4hyl_A Stage II sporulation pr 23.7 1.3E+02 0.0044 20.9 5.0 46 116-163 60-107 (117)
383 2kg4_A Growth arrest and DNA-d 23.6 62 0.0021 25.8 3.3 44 127-171 50-104 (165)
384 1pq4_A Periplasmic binding pro 23.6 1.9E+02 0.0065 24.3 6.8 17 183-199 272-288 (291)
385 4dkx_A RAS-related protein RAB 23.4 79 0.0027 25.2 4.1 76 78-155 64-152 (216)
386 3a1c_A Probable copper-exporti 23.3 1.2E+02 0.0041 24.8 5.3 53 120-172 169-224 (287)
387 1nrw_A Hypothetical protein, h 22.8 1.8E+02 0.006 23.6 6.3 61 77-158 5-65 (288)
388 3bzc_A TEX; helix-turn-helix, 22.6 1.5E+02 0.0051 29.2 6.5 81 78-171 344-432 (785)
389 1r4w_A Glutathione S-transfera 22.6 64 0.0022 25.7 3.4 34 99-135 6-39 (226)
390 2r47_A Uncharacterized protein 22.1 49 0.0017 26.2 2.4 83 75-162 65-147 (157)
391 4hoj_A REGF protein; GST, glut 22.1 44 0.0015 25.9 2.2 65 100-171 3-68 (210)
392 2l69_A Rossmann 2X3 fold prote 22.0 2.3E+02 0.008 20.6 6.7 53 118-170 37-94 (134)
393 3s6j_A Hydrolase, haloacid deh 21.9 95 0.0032 23.4 4.2 34 121-154 98-131 (233)
394 2pr7_A Haloacid dehalogenase/e 21.9 52 0.0018 22.9 2.5 38 116-153 20-57 (137)
395 3us3_A Calsequestrin-1; calciu 21.9 1.2E+02 0.0042 26.0 5.3 64 98-162 249-318 (367)
396 3hp4_A GDSL-esterase; psychrot 21.9 1.4E+02 0.0048 21.9 5.1 43 113-155 86-140 (185)
397 3t5g_A GTP-binding protein RHE 21.8 2.3E+02 0.008 20.5 6.3 76 77-154 55-144 (181)
398 3mil_A Isoamyl acetate-hydroly 21.8 2.7E+02 0.0091 21.2 9.8 26 113-138 96-121 (240)
399 3m9l_A Hydrolase, haloacid deh 21.7 1.2E+02 0.004 22.8 4.7 59 121-179 77-150 (205)
400 3epr_A Hydrolase, haloacid deh 21.5 1.3E+02 0.0045 23.9 5.1 56 77-154 6-64 (264)
401 2ka5_A Putative anti-sigma fac 21.3 1.5E+02 0.0052 21.2 5.0 62 98-162 53-116 (125)
402 4gqa_A NAD binding oxidoreduct 21.1 1.1E+02 0.0038 26.6 4.9 47 108-154 33-82 (412)
403 1sbo_A Putative anti-sigma fac 21.1 2E+02 0.0067 19.4 5.4 42 116-159 62-105 (110)
404 3ib6_A Uncharacterized protein 21.0 1E+02 0.0035 23.4 4.2 38 117-154 37-77 (189)
405 3mc1_A Predicted phosphatase, 20.9 1.2E+02 0.0042 22.8 4.6 60 120-179 92-165 (226)
406 1ivn_A Thioesterase I; hydrola 20.6 1.4E+02 0.0047 22.3 4.9 43 113-155 82-136 (190)
407 3qgm_A P-nitrophenyl phosphata 20.4 1.9E+02 0.0064 22.8 5.8 56 77-154 9-67 (268)
408 1m0f_B GPB, scaffolding protei 20.1 27 0.00093 23.5 0.5 28 103-133 22-49 (68)
No 1
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.90 E-value=1.5e-23 Score=172.10 Aligned_cols=108 Identities=16% Similarity=0.224 Sum_probs=101.6
Q ss_pred CCccccCcCCCcEEe-cCCCCeEeCCCccCCCeEEEEEEcCCCChhHH-HHHHHHHHhHHHHHhCCCEEEE-EcCCCHHH
Q 027527 67 VSEDTKNLLDTVKVY-DVNGNAIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVMDASGVALVL-IGPGSVEQ 143 (222)
Q Consensus 67 ~~~~~g~~apdf~L~-D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~-~el~~L~~~~~~l~~~gv~lva-Is~~s~~~ 143 (222)
++..+|+++|+|+|. |.+|+.++|+++++++++||+|||+.|||+|+ +|++.|++.+++|++.|+++|+ |+.|+++.
T Consensus 13 ~~~~vG~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~ 92 (173)
T 3mng_A 13 APIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFV 92 (173)
T ss_dssp CCCCTTCBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHH
T ss_pred CCCCCCCCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHH
Confidence 447889999999999 99999999999777888999999999999999 5999999999999999999997 99999999
Q ss_pred HHHHHHHcCCC--CceeecCChHHHHHcCCccc
Q 027527 144 ARTFSEQTKFK--GEVYADPNHSSYEALSFVSG 174 (222)
Q Consensus 144 i~~f~~~~~~p--fpil~Dpd~~lyk~lGl~~~ 174 (222)
.++|+++.+++ |++++|+++++.++||+...
T Consensus 93 ~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~ 125 (173)
T 3mng_A 93 TGEWGRAHKAEGKVRLLADPTGAFGKETDLLLD 125 (173)
T ss_dssp HHHHHHHTTCTTTCEEEECTTCHHHHHHTCBCC
T ss_pred HHHHHHHhCCCCceEEEECCChHHHHHhCCCcc
Confidence 99999999998 99999999999999999743
No 2
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.89 E-value=7.3e-24 Score=169.74 Aligned_cols=104 Identities=15% Similarity=0.169 Sum_probs=92.2
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHH
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~ 148 (222)
.++|+++|+|+|.|.+|+.++|+++ +++++||.|++++|||+|+.|++.|+++++++++.|+.+++|+.|+++.+++|+
T Consensus 4 l~vG~~aPdF~l~~~~G~~~~l~d~-~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~ 82 (157)
T 4g2e_A 4 VEIGELAPDFELPDTELKKVKLSAL-KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFK 82 (157)
T ss_dssp CCTTSBCCCCEEEBTTSCEEEGGGG-TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHH
T ss_pred CCCCCCCcCeEeECCCCCEEeHHHH-CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHH
Confidence 5789999999999999999999997 577778888789999999999999999999999999999999999999999999
Q ss_pred HHcCCCCceeecCChHHHHHcCCcc
Q 027527 149 EQTKFKGEVYADPNHSSYEALSFVS 173 (222)
Q Consensus 149 ~~~~~pfpil~Dpd~~lyk~lGl~~ 173 (222)
++++++||+++|+++++.++||+..
T Consensus 83 ~~~~~~~p~l~D~~~~v~~~ygv~~ 107 (157)
T 4g2e_A 83 EHNKLNFTILSDYNREVVKKYNVAW 107 (157)
T ss_dssp HHTTCCSEEEECTTSHHHHHTTCEE
T ss_pred HHcCCcEEEEEcCCcHHHHHcCCcc
Confidence 9999999999999999999999853
No 3
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.89 E-value=1e-24 Score=176.53 Aligned_cols=104 Identities=12% Similarity=0.148 Sum_probs=99.1
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCcc-CCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHH
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPISDLW-KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~-~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f 147 (222)
.++|+++|+|+|.|.+|+.++|+|+. +++++||+|||+.|||+|+.|++.|++.++++++.|+++++|+.|+++.+++|
T Consensus 5 l~vG~~aPdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~ 84 (164)
T 4gqc_A 5 VELGEKAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKF 84 (164)
T ss_dssp CCTTSBCCCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHH
T ss_pred ccCCCCCcCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHH
Confidence 47899999999999999999999986 56788899999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCceeecCChHHHHHcCCc
Q 027527 148 SEQTKFKGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 148 ~~~~~~pfpil~Dpd~~lyk~lGl~ 172 (222)
+++++++||+++|+++++.++||+.
T Consensus 85 ~~~~~~~fp~l~D~~~~v~~~ygv~ 109 (164)
T 4gqc_A 85 KDENRLAFNLLSDYNREVIKLYNVY 109 (164)
T ss_dssp HHHTTCCSEEEECTTSHHHHHTTCE
T ss_pred HHhcCcccceeecCchHHHHHcCCc
Confidence 9999999999999999999999984
No 4
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.89 E-value=8.8e-23 Score=165.91 Aligned_cols=106 Identities=12% Similarity=0.140 Sum_probs=100.6
Q ss_pred ccccCcCCCcEEe-cCCCCeEeCCCccCCCeEEEEEEcCCCChhHHH-HHHHHHHhHHHHHhCCC-EEEEEcCCCHHHHH
Q 027527 69 EDTKNLLDTVKVY-DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRK-RADYLAAKKDVMDASGV-ALVLIGPGSVEQAR 145 (222)
Q Consensus 69 ~~~g~~apdf~L~-D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~-el~~L~~~~~~l~~~gv-~lvaIs~~s~~~i~ 145 (222)
.++|+.+|+|++. |.+|+.++|+++++++++||+|||+.|||+|+. |++.|+++++++++.|+ +||+|+.++++.++
T Consensus 3 l~~G~~aP~f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~ 82 (167)
T 2wfc_A 3 IKEGDKLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMD 82 (167)
T ss_dssp CCTTCBCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHH
T ss_pred CCCCCcCCCcEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHH
Confidence 5689999999999 999999999998678889999999999999999 99999999999999999 99999999999999
Q ss_pred HHHHHcCCC--CceeecCChHHHHHcCCccc
Q 027527 146 TFSEQTKFK--GEVYADPNHSSYEALSFVSG 174 (222)
Q Consensus 146 ~f~~~~~~p--fpil~Dpd~~lyk~lGl~~~ 174 (222)
+|+++++++ ||+++|+++++.++||+...
T Consensus 83 ~~~~~~~~~~~fp~l~D~~~~~~~~~gv~~~ 113 (167)
T 2wfc_A 83 AWGKAHGADDKVQMLADPGGAFTKAVDMELD 113 (167)
T ss_dssp HHHHHTTCTTTSEEEECTTSHHHHHTTCEEC
T ss_pred HHHHhcCCCcceEEEECCCCcHHHHcCCccc
Confidence 999999999 99999999999999999653
No 5
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.89 E-value=4.4e-23 Score=170.90 Aligned_cols=107 Identities=12% Similarity=0.127 Sum_probs=101.5
Q ss_pred CCccccCcCCCcEEecC--CC-CeEeCCCccCCCeEEEEEEcCCCChhHHH-HHHHHHHhHHHHHhCCCE-EEEEcCCCH
Q 027527 67 VSEDTKNLLDTVKVYDV--NG-NAIPISDLWKDRKAVVAFARHFGCVLCRK-RADYLAAKKDVMDASGVA-LVLIGPGSV 141 (222)
Q Consensus 67 ~~~~~g~~apdf~L~D~--~G-~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~-el~~L~~~~~~l~~~gv~-lvaIs~~s~ 141 (222)
...++|+++|+|+|.|. +| +.++|+++++++++||+|||+.|||+|+. |++.|++++++|++.|++ |++|+.+++
T Consensus 24 ~~l~vG~~aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~ 103 (184)
T 3uma_A 24 MTIAVGDKLPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDL 103 (184)
T ss_dssp SCCCTTCBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCH
T ss_pred CcCCCCCCCCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCH
Confidence 34789999999999998 99 99999996678889999999999999999 899999999999999999 999999999
Q ss_pred HHHHHHHHHcCCC--CceeecCChHHHHHcCCcc
Q 027527 142 EQARTFSEQTKFK--GEVYADPNHSSYEALSFVS 173 (222)
Q Consensus 142 ~~i~~f~~~~~~p--fpil~Dpd~~lyk~lGl~~ 173 (222)
+..++|+++++++ ||+++|+++++.++||+..
T Consensus 104 ~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~ 137 (184)
T 3uma_A 104 HVMGAWATHSGGMGKIHFLSDWNAAFTKAIGMEI 137 (184)
T ss_dssp HHHHHHHHHHTCTTTSEEEECTTCHHHHHTTCEE
T ss_pred HHHHHHHHHhCCCCceEEEEcCchHHHHHcCCce
Confidence 9999999999999 9999999999999999964
No 6
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.87 E-value=6.9e-22 Score=156.86 Aligned_cols=110 Identities=13% Similarity=0.084 Sum_probs=98.4
Q ss_pred CCCCCCccccCcCCCcE--EecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCC
Q 027527 63 SPPSVSEDTKNLLDTVK--VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (222)
Q Consensus 63 ~~~~~~~~~g~~apdf~--L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s 140 (222)
|+.++...+|+++|+|+ +.|.+|++++|+++ +++++||.|++.+|||.|+.+++.|+++++++++.|+++|+|+.|+
T Consensus 1 s~~m~~l~~G~~~P~f~~~l~~~~G~~~~l~~~-~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~ 79 (163)
T 3gkn_A 1 SNAMTDAVLELPAATFDLPLSLSGGTQTTLRAH-AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDS 79 (163)
T ss_dssp ---CCCCCCCCCGGGGGCCEECSTTCEECSGGG-TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcccccccCCcCCCccccccCCCCCEEEHHHh-CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 34566688999999999 99999999999997 4565555555569999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCceeecCChHHHHHcCCcc
Q 027527 141 VEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (222)
Q Consensus 141 ~~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~ 173 (222)
++.+++|+++++++|+++.|++.++.+.||+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 112 (163)
T 3gkn_A 80 VKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIK 112 (163)
T ss_dssp HHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEE
T ss_pred HHHHHHHHHHhCCCceEEECCcHHHHHHhCCcc
Confidence 999999999999999999999999999999965
No 7
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.86 E-value=4.3e-22 Score=162.09 Aligned_cols=105 Identities=19% Similarity=0.285 Sum_probs=96.0
Q ss_pred ccccCcCCCcEEecC----CC-----CeEeCCCccCCCeEEEEEEcCCCChhHHHH-HHHHHHhHHHHHhCCCE-EEEEc
Q 027527 69 EDTKNLLDTVKVYDV----NG-----NAIPISDLWKDRKAVVAFARHFGCVLCRKR-ADYLAAKKDVMDASGVA-LVLIG 137 (222)
Q Consensus 69 ~~~g~~apdf~L~D~----~G-----~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~e-l~~L~~~~~~l~~~gv~-lvaIs 137 (222)
..+|+.+|+|++.|. +| +.++|+++++++++||+|||+.|||+|++| ++.|+++++++++.|++ |++|+
T Consensus 7 ~~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is 86 (171)
T 2pwj_A 7 TDILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVA 86 (171)
T ss_dssp ---CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEE
T ss_pred ccccCcCCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 456779999999998 57 999999976788899999999999999999 99999999999999999 99999
Q ss_pred CCCHHHHHHHHHHcCC--CCceeecCChHHHHHcCCcc
Q 027527 138 PGSVEQARTFSEQTKF--KGEVYADPNHSSYEALSFVS 173 (222)
Q Consensus 138 ~~s~~~i~~f~~~~~~--pfpil~Dpd~~lyk~lGl~~ 173 (222)
.++++.+++|++++++ +||+++|+++++.++||+..
T Consensus 87 ~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~ 124 (171)
T 2pwj_A 87 INDPYTVNAWAEKIQAKDAIEFYGDFDGSFHKSLELTT 124 (171)
T ss_dssp SSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEE
T ss_pred CCCHHHHHHHHHHhCCCCceEEEECCccHHHHHhCCcc
Confidence 9999999999999996 79999999999999999863
No 8
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.86 E-value=5.7e-22 Score=161.69 Aligned_cols=108 Identities=10% Similarity=0.066 Sum_probs=98.4
Q ss_pred CCCCccccCc----CCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCC
Q 027527 65 PSVSEDTKNL----LDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (222)
Q Consensus 65 ~~~~~~~g~~----apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s 140 (222)
.....++|+. +|+|+|.|.+|+.++|+++ +++++||+|+++.|||+|+.+++.|+++++++++.|++||+|+.|+
T Consensus 17 ~~~~l~~Gd~ig~~aP~f~l~~~~G~~v~l~d~-~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~ 95 (179)
T 3ixr_A 17 RGSHMNIGDTLNHSLLNHPLMLSGSTCKTLSDY-TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDS 95 (179)
T ss_dssp -CCSSCTTCBCCHHHHHCCEEEGGGEEECGGGG-TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCC
T ss_pred CCcccCcCcccCCcCCCeeEECCCCCEEeHHHH-CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 3444566666 9999999999999999997 5667888888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCceeecCChHHHHHcCCcc
Q 027527 141 VEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (222)
Q Consensus 141 ~~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~ 173 (222)
++.+++|+++++++|++++|++.++.++||+..
T Consensus 96 ~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~ 128 (179)
T 3ixr_A 96 VKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIK 128 (179)
T ss_dssp HHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEE
T ss_pred HHHHHHHHHHcCCceEEEECCchHHHHHcCCcc
Confidence 999999999999999999999999999999964
No 9
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.86 E-value=4.5e-21 Score=152.81 Aligned_cols=104 Identities=15% Similarity=0.176 Sum_probs=96.0
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCe-EEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHH
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRK-AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~-vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f 147 (222)
..+|+++|+|++.|.+|+.++|+++ ++++ +||.|++++|||+|+.+++.|+++++++++.|+++|+|+.|+++.+++|
T Consensus 2 l~~G~~~P~f~l~~~~G~~~~l~~~-~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~ 80 (161)
T 3drn_A 2 VKVGDKAPLFEGIADNGEKISLSDY-IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRF 80 (161)
T ss_dssp CCTTSBCCCCEEEETTSCEEEGGGT-TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHH
T ss_pred CCCCCcCCCeEeecCCCCEEEHHHh-cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHH
Confidence 3689999999999999999999997 4555 5555555999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCceeecCChHHHHHcCCcc
Q 027527 148 SEQTKFKGEVYADPNHSSYEALSFVS 173 (222)
Q Consensus 148 ~~~~~~pfpil~Dpd~~lyk~lGl~~ 173 (222)
+++++++|+++.|++..+.+.||+..
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (161)
T 3drn_A 81 KEKYKLPFILVSDPDKKIRELYGAKG 106 (161)
T ss_dssp HHHTTCCSEEEECTTSHHHHHTTCCC
T ss_pred HHHhCCCceEEECCcHHHHHHcCCCC
Confidence 99999999999999999999999975
No 10
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.86 E-value=1.6e-21 Score=156.52 Aligned_cols=105 Identities=14% Similarity=0.134 Sum_probs=97.4
Q ss_pred ccccCcCCCcEEe--cCCC--CeEeCCCccCCCeEEEEEEcCCCChhHH-HHHHHHHHhHHHHHhCCCE-EEEEcCCCHH
Q 027527 69 EDTKNLLDTVKVY--DVNG--NAIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVMDASGVA-LVLIGPGSVE 142 (222)
Q Consensus 69 ~~~g~~apdf~L~--D~~G--~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~-~el~~L~~~~~~l~~~gv~-lvaIs~~s~~ 142 (222)
.++|+.+|+|++. |.+| +.++|+++++++++||.|+++.|||+|+ .|++.|+++++++++.|++ |++|+.++++
T Consensus 4 ~~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~ 83 (162)
T 1tp9_A 4 IAVGDVLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPF 83 (162)
T ss_dssp CCTTCBCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHH
T ss_pred CCCCCCCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHH
Confidence 5789999999986 9999 9999999556777777777799999999 8999999999999999999 9999999999
Q ss_pred HHHHHHHHcCC--CCceeecCChHHHHHcCCcc
Q 027527 143 QARTFSEQTKF--KGEVYADPNHSSYEALSFVS 173 (222)
Q Consensus 143 ~i~~f~~~~~~--pfpil~Dpd~~lyk~lGl~~ 173 (222)
.+++|++++++ +|++++|+++++.++||+..
T Consensus 84 ~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~ 116 (162)
T 1tp9_A 84 VMKAWAKSYPENKHVKFLADGSATYTHALGLEL 116 (162)
T ss_dssp HHHHHHHTCTTCSSEEEEECTTSHHHHHTTCEE
T ss_pred HHHHHHHhcCCCCCeEEEECCCchHHHHcCccc
Confidence 99999999999 89999999999999999973
No 11
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.86 E-value=1.7e-21 Score=154.74 Aligned_cols=108 Identities=10% Similarity=0.147 Sum_probs=96.6
Q ss_pred CCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEE-EEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHH
Q 027527 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVA-FARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQAR 145 (222)
Q Consensus 67 ~~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVv-F~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~ 145 (222)
....+|+.+|+|++.|.+|+.++|+++.++++++|+ |++++|||+|+.+++.|+++++++++.| +||+|+.|+++.++
T Consensus 5 ~~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~~ 83 (159)
T 2a4v_A 5 NELEIGDPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQK 83 (159)
T ss_dssp TCCCTTCBCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHHH
T ss_pred CcCCCCCCCCCeEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHHH
Confidence 347889999999999999999999998543344444 4569999999999999999999999999 99999999999999
Q ss_pred HHHHHcCCCCceeecCChHHHHHcCCcccc
Q 027527 146 TFSEQTKFKGEVYADPNHSSYEALSFVSGV 175 (222)
Q Consensus 146 ~f~~~~~~pfpil~Dpd~~lyk~lGl~~~~ 175 (222)
+|+++++++|+++.|++.++++.||+....
T Consensus 84 ~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p 113 (159)
T 2a4v_A 84 KFQSKQNLPYHLLSDPKREFIGLLGAKKTP 113 (159)
T ss_dssp HHHHHHTCSSEEEECTTCHHHHHHTCBSSS
T ss_pred HHHHHhCCCceEEECCccHHHHHhCCcccc
Confidence 999999999999999999999999997653
No 12
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.83 E-value=3.5e-20 Score=148.51 Aligned_cols=101 Identities=11% Similarity=0.156 Sum_probs=94.2
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHH
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~ 148 (222)
..+|+++|+|+|.|.+|+.++|+++ +++++||.|++..|||+|+.+++.|++++++ .|+++|+|+.|+++.+++|+
T Consensus 20 l~~G~~aP~f~l~~~~G~~~~l~~~-~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d~~~~~~~~~ 95 (166)
T 3p7x_A 20 INEGDFAPDFTVLDNDLNQVTLADY-AGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISADLPFAQKRWC 95 (166)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGG-TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESSCHHHHHHHH
T ss_pred CCCCCCCCCeEEEcCCCCEEeHHHh-CCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECCCHHHHHHHH
Confidence 6789999999999999999999997 5777777777799999999999999999887 89999999999999999999
Q ss_pred HHcCC-CCceeecC-ChHHHHHcCCcc
Q 027527 149 EQTKF-KGEVYADP-NHSSYEALSFVS 173 (222)
Q Consensus 149 ~~~~~-pfpil~Dp-d~~lyk~lGl~~ 173 (222)
+++++ +|++++|+ +.++.++||+..
T Consensus 96 ~~~~~~~~~~l~D~~~~~~~~~~gv~~ 122 (166)
T 3p7x_A 96 ASAGLDNVITLSDHRDLSFGENYGVVM 122 (166)
T ss_dssp HHHTCSSCEEEECTTTCHHHHHHTCEE
T ss_pred HHcCCCceEEccCCchhHHHHHhCCcc
Confidence 99999 89999999 999999999974
No 13
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.82 E-value=2.8e-20 Score=157.85 Aligned_cols=105 Identities=12% Similarity=0.134 Sum_probs=97.0
Q ss_pred ccccCcCCCcEEecC-CCC--eEeCCCccCCCeEEEEEEcCCCChhHH-HHHHHHHHhHHHHHhCCC-EEEEEcCCCHHH
Q 027527 69 EDTKNLLDTVKVYDV-NGN--AIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVMDASGV-ALVLIGPGSVEQ 143 (222)
Q Consensus 69 ~~~g~~apdf~L~D~-~G~--~v~Lsdl~~~~~vvVvF~R~~~Cp~C~-~el~~L~~~~~~l~~~gv-~lvaIs~~s~~~ 143 (222)
..+|+.+|+|++.|. +|+ .++|+++++++++||.|+|++|||+|+ .|++.|+++++++++.|+ +|++|+.++++.
T Consensus 3 ~~~G~~aP~f~l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~ 82 (241)
T 1nm3_A 3 SMEGKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFV 82 (241)
T ss_dssp CCTTSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHH
T ss_pred ccCCCCCCCeEEEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHH
Confidence 468999999999996 787 999999556778888888899999999 999999999999999999 999999999999
Q ss_pred HHHHHHHcCCC-CceeecCChHHHHHcCCcc
Q 027527 144 ARTFSEQTKFK-GEVYADPNHSSYEALSFVS 173 (222)
Q Consensus 144 i~~f~~~~~~p-fpil~Dpd~~lyk~lGl~~ 173 (222)
+++|+++++++ |++++|+++++.++||+..
T Consensus 83 ~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~ 113 (241)
T 1nm3_A 83 MNAWKEDEKSENISFIPDGNGEFTEGMGMLV 113 (241)
T ss_dssp HHHHHHHTTCTTSEEEECTTSHHHHHTTCEE
T ss_pred HHHHHHhcCCCceEEEECCCcHHHHHhCcee
Confidence 99999999998 9999999999999999863
No 14
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.82 E-value=5e-20 Score=145.41 Aligned_cols=103 Identities=13% Similarity=0.148 Sum_probs=95.1
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCC-eEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHH
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDR-KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~-~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f 147 (222)
..+|+.+|+|++.|.+|+.++|+++. ++ ++||.|+|++||++|+.+++.|+++++++.+.|+++++|+.|+++.+++|
T Consensus 9 ~~~G~~~p~f~l~~~~G~~~~l~~~~-gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~ 87 (160)
T 1xvw_A 9 LNVGATAPDFTLRDQNQQLVTLRGYR-GAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIW 87 (160)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGGT-TTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHH
T ss_pred CCCCCCCCCeEeEcCCCCEEeHHHhc-CCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHH
Confidence 67899999999999999999999974 55 56666666999999999999999999999888999999999999999999
Q ss_pred HHHcCCCCceeecC--ChHHHHHcCCc
Q 027527 148 SEQTKFKGEVYADP--NHSSYEALSFV 172 (222)
Q Consensus 148 ~~~~~~pfpil~Dp--d~~lyk~lGl~ 172 (222)
+++++++|+++.|. +..+.+.||+.
T Consensus 88 ~~~~~~~~~~~~d~~~~~~~~~~~~v~ 114 (160)
T 1xvw_A 88 ATQSGFTFPLLSDFWPHGAVSQAYGVF 114 (160)
T ss_dssp HHHHTCCSCEEECTTTTTHHHHHTTCE
T ss_pred HHhcCCCceEEecCCcChHHHHHcCCc
Confidence 99999999999995 99999999997
No 15
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.82 E-value=4.5e-20 Score=156.56 Aligned_cols=108 Identities=10% Similarity=0.051 Sum_probs=94.6
Q ss_pred CCCCccccCcCCCcEEecC--CC--CeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCC
Q 027527 65 PSVSEDTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (222)
Q Consensus 65 ~~~~~~~g~~apdf~L~D~--~G--~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s 140 (222)
.++...+|+.+|+|++.|. +| +.++|+++++++++||.|++++|||+|+.+++.|+++++++++.|++||+|+.|+
T Consensus 21 ~M~~l~~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~ 100 (221)
T 2c0d_A 21 HMKLSLVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDS 100 (221)
T ss_dssp -----CTTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSC
T ss_pred ccccCCCCCCCCCeEEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3445689999999999998 99 9999999756766555555599999999999999999999999999999999999
Q ss_pred HHHHHHHHHHc-------CCCCceeecCChHHHHHcCCc
Q 027527 141 VEQARTFSEQT-------KFKGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 141 ~~~i~~f~~~~-------~~pfpil~Dpd~~lyk~lGl~ 172 (222)
++.+++|+++. +++|+++.|++.++.++||+.
T Consensus 101 ~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~ 139 (221)
T 2c0d_A 101 VYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVL 139 (221)
T ss_dssp HHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHHHTTCE
T ss_pred HHHHHHHHHHhhhhcCccCCceEEEECCchHHHHHcCCc
Confidence 99999999998 789999999999999999994
No 16
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.81 E-value=5.4e-20 Score=156.35 Aligned_cols=103 Identities=16% Similarity=0.118 Sum_probs=96.6
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHH
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~ 148 (222)
..+|+.+|+|++.|.+| .++|+++.+++++||+|||+.|||+|+.|++.|++++++|++.|++||+|+.|+.+..++|.
T Consensus 5 l~~G~~aP~F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~ 83 (224)
T 1prx_A 5 LLLGDVAPNFEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWS 83 (224)
T ss_dssp CCTTCBCCCCEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHH
T ss_pred CCCcCCCCCcEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 57899999999999999 99999986555899999999999999999999999999999999999999999998888999
Q ss_pred HH----------cCCCCceeecCChHHHHHcCCc
Q 027527 149 EQ----------TKFKGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 149 ~~----------~~~pfpil~Dpd~~lyk~lGl~ 172 (222)
++ .+++||+++|+++++.++||+.
T Consensus 84 ~~i~~~~~~~~~~~~~fpil~D~~~~va~~ygv~ 117 (224)
T 1prx_A 84 KDINAYNSEEPTEKLPFPIIDDRNRELAILLGML 117 (224)
T ss_dssp HHHHHHTTSCCCSCCSSCEEECTTCHHHHHTTSS
T ss_pred HHHHHhhCcccccCcCcceeecCchHHHHHhCCC
Confidence 87 8999999999999999999985
No 17
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.81 E-value=5.2e-20 Score=152.38 Aligned_cols=105 Identities=11% Similarity=0.127 Sum_probs=96.9
Q ss_pred ccccCcCCCcEEecCCC----------CeEeCCCccCCCeEEEEEEcCCCChhHHH-HHHHHHHhHHHHHhCCC-EEEEE
Q 027527 69 EDTKNLLDTVKVYDVNG----------NAIPISDLWKDRKAVVAFARHFGCVLCRK-RADYLAAKKDVMDASGV-ALVLI 136 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G----------~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~-el~~L~~~~~~l~~~gv-~lvaI 136 (222)
.++||++|++++.-..+ +.++|+|+++++++||+|||+.|||.|.. |++.+++.+++|+++|+ +|++|
T Consensus 10 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigI 89 (176)
T 4f82_A 10 IQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCV 89 (176)
T ss_dssp CCTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred hhcCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 47899999987764322 78999998788899999999999999999 99999999999999999 99999
Q ss_pred cCCCHHHHHHHHHHcCCC--CceeecCChHHHHHcCCcc
Q 027527 137 GPGSVEQARTFSEQTKFK--GEVYADPNHSSYEALSFVS 173 (222)
Q Consensus 137 s~~s~~~i~~f~~~~~~p--fpil~Dpd~~lyk~lGl~~ 173 (222)
+.|++...++|+++.+++ |++++|+++++.++||+..
T Consensus 90 S~D~~~~~~~f~~~~~l~~~f~lLsD~~~~va~ayGv~~ 128 (176)
T 4f82_A 90 SVNDAFVMGAWGRDLHTAGKVRMMADGSAAFTHALGLTQ 128 (176)
T ss_dssp ESSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEE
T ss_pred eCCCHHHHHHHHHHhCCCCCceEEEcCchHHHHHhCCCc
Confidence 999999999999999999 9999999999999999963
No 18
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.81 E-value=4.6e-20 Score=151.39 Aligned_cols=102 Identities=14% Similarity=0.128 Sum_probs=92.6
Q ss_pred cccCcCCCcEEecC-CC--CeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHH
Q 027527 70 DTKNLLDTVKVYDV-NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (222)
Q Consensus 70 ~~g~~apdf~L~D~-~G--~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~ 146 (222)
.+|+.+|+|++.|. +| +.++|+++ +++++||.|++++|||+|+.+++.|+++++++++.|++||+|+.++++.+++
T Consensus 2 ~~G~~aP~f~l~~~~~G~~~~v~l~~~-~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~ 80 (186)
T 1n8j_A 2 LINTKIKPFKNQAFKNGEFIEVTEKDT-EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKA 80 (186)
T ss_dssp CTTCBCCCCEEEEEETTEEEEEEHHHH-TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHH
T ss_pred CCCCcCCCcEeecccCCcceEEEHHHH-CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH
Confidence 57999999999999 59 89999997 4555555554479999999999999999999999999999999999999999
Q ss_pred HHHHc----CCCCceeecCChHHHHHcCCc
Q 027527 147 FSEQT----KFKGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 147 f~~~~----~~pfpil~Dpd~~lyk~lGl~ 172 (222)
|++++ +++|++++|+++++.++||+.
T Consensus 81 ~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~ 110 (186)
T 1n8j_A 81 WHSSSETIAKIKYAMIGDPTGALTRNFDNM 110 (186)
T ss_dssp HHHHCTTGGGCCSEEEECTTSHHHHHTTCE
T ss_pred HHHHcCcccCCceeEEECCchHHHHHhCCc
Confidence 99999 899999999999999999986
No 19
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.81 E-value=7.7e-20 Score=153.55 Aligned_cols=111 Identities=16% Similarity=0.121 Sum_probs=102.0
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcC--------C
Q 027527 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------G 139 (222)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~--------~ 139 (222)
..++|+++|+|+|.|.+|+.++|+++ ++++++|++||++|||+|+.+++.|+++++++.+.|+++|+|+. +
T Consensus 31 ~l~~G~~aP~f~l~~~~G~~v~l~~~-~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d 109 (218)
T 3u5r_E 31 SITLGTRAADFVLPDAGGNLFTLAEF-KDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEE 109 (218)
T ss_dssp CCCTTCBCCCCCEECTTCCEECGGGG-TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGG
T ss_pred cCCCCCcCCCcEeECCCCCEEeHHHh-CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccC
Confidence 46789999999999999999999997 46667899999999999999999999999999999999999999 6
Q ss_pred CHHHHHHHHHHcCCCCceeecCChHHHHHcCCccccceee
Q 027527 140 SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 140 s~~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~~~~~~ 179 (222)
+++.+++|+++++++|+++.|++..+.+.||+...+...+
T Consensus 110 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~~P~~~l 149 (218)
T 3u5r_E 110 TLERVGAEVKAYGYGFPYLKDASQSVAKAYGAACTPDFFL 149 (218)
T ss_dssp SHHHHHHHHHHHTCCSCEEECTTCHHHHHHTCCEESEEEE
T ss_pred CHHHHHHHHHHhCCCccEEECCccHHHHHcCCCCCCeEEE
Confidence 7899999999999999999999999999999987665544
No 20
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.81 E-value=8.7e-20 Score=146.65 Aligned_cols=101 Identities=13% Similarity=0.112 Sum_probs=92.2
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHH
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~ 148 (222)
..+|+.+|+|++.|.+|+.++|+++ +++++||.|+++.|||+|+++++.|+++++++ .|+++|+|+.|+++.+++|+
T Consensus 21 l~~g~~~P~f~l~~~~G~~~~l~~~-~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d~~~~~~~~~ 97 (171)
T 2yzh_A 21 LKVGDRAPEAVVVTKDLQEKIVGGA-KDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMDLPFAQKRFC 97 (171)
T ss_dssp CCTTSBCCCEEEEETTSCEEEESSC-CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHHHHH
T ss_pred CCCCCcCCceEEECCCCCEeeHHHh-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCCCHHHHHHHH
Confidence 5789999999999999999999997 46666655556999999999999999999999 79999999999999999999
Q ss_pred HHcCC-CCceeec-CChHHHHHcCCcc
Q 027527 149 EQTKF-KGEVYAD-PNHSSYEALSFVS 173 (222)
Q Consensus 149 ~~~~~-pfpil~D-pd~~lyk~lGl~~ 173 (222)
+++++ +|+++.| ++.++ ++||+..
T Consensus 98 ~~~~~~~~~~l~D~~~~~~-~~~gv~~ 123 (171)
T 2yzh_A 98 ESFNIQNVTVASDFRYRDM-EKYGVLI 123 (171)
T ss_dssp HHTTCCSSEEEECTTTCGG-GGGTCBB
T ss_pred HHcCCCCeEEeecCccCcH-HHhCCEe
Confidence 99999 8999999 89999 9999864
No 21
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.81 E-value=9.1e-20 Score=145.68 Aligned_cols=102 Identities=7% Similarity=0.112 Sum_probs=91.9
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHH
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~ 148 (222)
..+|+.+|+|++.|.+|+.++|+++ +++++||.|+++.||++|+.+++.|+++++++ .|+++|+|+.|+++.+++|+
T Consensus 16 ~~~G~~~P~f~l~~~~G~~v~l~~~-~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d~~~~~~~~~ 92 (163)
T 1psq_A 16 LQVGDKALDFSLTTTDLSKKSLADF-DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMDLPFAQKRWC 92 (163)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGG-TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHHHHH
T ss_pred CCCCCCCCCEEEEcCCCcEeeHHHh-CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECCCHHHHHHHH
Confidence 5789999999999999999999997 45554444444699999999999999999999 79999999999999999999
Q ss_pred HHcCC-CCceeec-CChHHHHHcCCcc
Q 027527 149 EQTKF-KGEVYAD-PNHSSYEALSFVS 173 (222)
Q Consensus 149 ~~~~~-pfpil~D-pd~~lyk~lGl~~ 173 (222)
+++++ +|+++.| ++.++.++||+..
T Consensus 93 ~~~~~~~~~~l~D~~~~~~~~~~gv~~ 119 (163)
T 1psq_A 93 GAEGLDNAIMLSDYFDHSFGRDYALLI 119 (163)
T ss_dssp HHHTCTTSEEEECTTTCHHHHHHTCBC
T ss_pred HhcCCCCcEEecCCchhHHHHHhCCcc
Confidence 99999 9999999 8999999999974
No 22
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.81 E-value=2.8e-19 Score=137.93 Aligned_cols=108 Identities=14% Similarity=0.096 Sum_probs=97.5
Q ss_pred cccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHH---hHHHHHhCCCEEEEEcCC-CHHHHH
Q 027527 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAA---KKDVMDASGVALVLIGPG-SVEQAR 145 (222)
Q Consensus 70 ~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~---~~~~l~~~gv~lvaIs~~-s~~~i~ 145 (222)
++|+++|+|++.|.+|+.++|+++ .++++|++||+.||++|+++++.|.+ +++++.+.|+.+++|+.+ +.+..+
T Consensus 2 ~~G~~~p~f~l~~~~g~~~~l~~~--~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~ 79 (142)
T 3ewl_A 2 NAGMKAADFTYVTVHGDNSRMSRL--KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWA 79 (142)
T ss_dssp CTTSBCCCCEEECTTCCEEEGGGC--CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHH
T ss_pred CCCCcCCCCEEECCCCCEEEhhhc--CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHH
Confidence 579999999999999999999997 34578888899999999999999999 899999999999999998 668899
Q ss_pred HHHHHcCCCCceeecCChHHHH--HcCCccccceee
Q 027527 146 TFSEQTKFKGEVYADPNHSSYE--ALSFVSGVLVTF 179 (222)
Q Consensus 146 ~f~~~~~~pfpil~Dpd~~lyk--~lGl~~~~~~~~ 179 (222)
+|.++++++|+++.|++..+.. .||+...+...+
T Consensus 80 ~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~l 115 (142)
T 3ewl_A 80 TKAVYMPQGWIVGWNKAGDIRTRQLYDIRATPTIYL 115 (142)
T ss_dssp HHHTTSCTTCEEEECTTCHHHHTTCSCCCSSSEEEE
T ss_pred HHHHHcCCCcceeeCCccchhhHHHcCCCCCCeEEE
Confidence 9999999999999999999987 899987776544
No 23
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.81 E-value=6e-20 Score=151.22 Aligned_cols=105 Identities=15% Similarity=0.112 Sum_probs=98.6
Q ss_pred ccccCcCCCcEEecCCC-CeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCE-EEEEcCCCHHHHHH
Q 027527 69 EDTKNLLDTVKVYDVNG-NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVA-LVLIGPGSVEQART 146 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G-~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~-lvaIs~~s~~~i~~ 146 (222)
.++|+++|+|+|.+.++ +.++|+++++++++||+|++..|||.|..|++.+++.+++|+++|++ |++|+.|++...++
T Consensus 14 ~~vGd~aPdf~l~~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~~ 93 (171)
T 2xhf_A 14 IKVGDIIPDVLVYEDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMAA 93 (171)
T ss_dssp CCTTCBCCCCEEECSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHH
T ss_pred ccCcCCCCCeEEecCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHH
Confidence 78999999999995442 89999998788899999999999999999999999999999999996 99999999999999
Q ss_pred HHHHcCC--CCceeecCChHHHHHcCCcc
Q 027527 147 FSEQTKF--KGEVYADPNHSSYEALSFVS 173 (222)
Q Consensus 147 f~~~~~~--pfpil~Dpd~~lyk~lGl~~ 173 (222)
|+++.++ +|++++|+++++.++||+..
T Consensus 94 w~~~~~~~~~f~lLSD~~~~~a~ayGv~~ 122 (171)
T 2xhf_A 94 WGKTVDPEHKIRMLADMHGEFTRALGTEL 122 (171)
T ss_dssp HHHHHCTTCCSEEEECTTSHHHHHHTCBC
T ss_pred HHHhcCCCCCeEEEEeCCchHHHHhCCce
Confidence 9999999 89999999999999999964
No 24
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.81 E-value=3.9e-20 Score=148.31 Aligned_cols=102 Identities=9% Similarity=0.149 Sum_probs=92.8
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHH
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~ 148 (222)
..+|+.+|+|++.|.+|+.++|+++ +++++||.|+++.|||+|+.+++.|+++++++ .|+++|+|+.|+++.+++|+
T Consensus 17 ~~~G~~~P~f~l~~~~G~~v~l~~~-~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d~~~~~~~~~ 93 (165)
T 1q98_A 17 PQVGEIVENFILVGNDLADVALNDF-ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISADLPFAQARFC 93 (165)
T ss_dssp CCTTCBCCCCEEECTTSCEEEGGGG-TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESSCHHHHTTCT
T ss_pred CCCCCCCCCeEEECCCCCEEehHHh-CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCCCHHHHHHHH
Confidence 5789999999999999999999997 56665555556899999999999999999999 79999999999999999999
Q ss_pred HHcCC-CCceeecC-ChHHHHHcCCcc
Q 027527 149 EQTKF-KGEVYADP-NHSSYEALSFVS 173 (222)
Q Consensus 149 ~~~~~-pfpil~Dp-d~~lyk~lGl~~ 173 (222)
+++++ +|++++|+ +.++.++||+..
T Consensus 94 ~~~~~~~~~~l~D~~~~~~~~~~gv~~ 120 (165)
T 1q98_A 94 GAEGIENAKTVSTFRNHALHSQLGVDI 120 (165)
T ss_dssp TTTTCTTEEEEECTTCTHHHHHTTCEE
T ss_pred HHcCCCceEEeeccccchHHHHhCcee
Confidence 99999 79999998 899999999864
No 25
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.81 E-value=1.2e-19 Score=152.49 Aligned_cols=106 Identities=11% Similarity=0.083 Sum_probs=96.5
Q ss_pred CCccccCcCCCcEEecC--CC--CeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 67 VSEDTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 67 ~~~~~g~~apdf~L~D~--~G--~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
....+|+++|+|++.|. +| +.++|+++++++++||.|+++.|||+|+.+++.|+++++++++.|+++|+|+.|+++
T Consensus 19 ~~l~~G~~aP~f~l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~ 98 (213)
T 2i81_A 19 SPTYVGKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKY 98 (213)
T ss_dssp -CCCBTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHH
T ss_pred ccccCCCcCCCeEeeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHH
Confidence 34688999999999998 89 999999975677666555559999999999999999999999999999999999999
Q ss_pred HHHHHHHHc-------CCCCceeecCChHHHHHcCCc
Q 027527 143 QARTFSEQT-------KFKGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 143 ~i~~f~~~~-------~~pfpil~Dpd~~lyk~lGl~ 172 (222)
.+++|+++. +++||++.|++.++.++||+.
T Consensus 99 ~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~ 135 (213)
T 2i81_A 99 THLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVL 135 (213)
T ss_dssp HHHHHHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCE
T ss_pred HHHHHHHHHHhhCCccCCCceEEECCchHHHHHhCCc
Confidence 999999988 899999999999999999998
No 26
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.80 E-value=1.4e-19 Score=148.20 Aligned_cols=103 Identities=14% Similarity=0.122 Sum_probs=94.4
Q ss_pred cccCcCCCcEEecC--CC--CeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHH
Q 027527 70 DTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQAR 145 (222)
Q Consensus 70 ~~g~~apdf~L~D~--~G--~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~ 145 (222)
++|+++|+|++.|. +| +.++|+++++++++||.|+++.|||+|+.+++.|+++++++++.|+++|+|+.|+.+.++
T Consensus 1 ~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~ 80 (192)
T 2h01_A 1 AFQGQAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHL 80 (192)
T ss_dssp CCSSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHH
T ss_pred CCCCcCCCcEeEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHH
Confidence 46899999999998 99 999999985676655555559999999999999999999999999999999999999999
Q ss_pred HHHHHc-------CCCCceeecCChHHHHHcCCc
Q 027527 146 TFSEQT-------KFKGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 146 ~f~~~~-------~~pfpil~Dpd~~lyk~lGl~ 172 (222)
+|.+++ +++|+++.|++.++.+.||+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 114 (192)
T 2h01_A 81 AWKKTPLSQGGIGNIKHTLISDISKSIARSYDVL 114 (192)
T ss_dssp HHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCE
T ss_pred HHHHhHHhhCCccCCCcCeEECCcHHHHHHhCCc
Confidence 999988 899999999999999999997
No 27
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.80 E-value=1.7e-19 Score=154.71 Aligned_cols=103 Identities=13% Similarity=0.106 Sum_probs=94.2
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHH
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~ 148 (222)
..+|+.+|+|++.|.+| .++|+++.+++++||+|+++.|||+|+.|++.|++++++|++.|++||+|+.|+.+..++|+
T Consensus 3 l~iG~~aPdF~l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~ 81 (233)
T 2v2g_A 3 ITLGEVFPNFEADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWS 81 (233)
T ss_dssp CCTTCBCCCCEEEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHH
T ss_pred CCCCCCCCCcEEecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH
Confidence 56899999999999999 99999975444677777779999999999999999999999999999999999999999999
Q ss_pred H------Hc--CCCCceeecCChHHHHHcCCc
Q 027527 149 E------QT--KFKGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 149 ~------~~--~~pfpil~Dpd~~lyk~lGl~ 172 (222)
+ +. +++||+++|+++++.++||+.
T Consensus 82 ~~i~~~~~~~~~~~fpil~D~~~~va~~ygv~ 113 (233)
T 2v2g_A 82 EDVKCLSGVKGDMPYPIIADETRELAVKLGMV 113 (233)
T ss_dssp HHHHHHHTCCSSCSSCEEECTTCHHHHHTTCE
T ss_pred HHHHHhhCcccCCceEEEECChHHHHHHhCCc
Confidence 8 57 899999999999999999985
No 28
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.80 E-value=1.5e-19 Score=153.29 Aligned_cols=103 Identities=11% Similarity=0.071 Sum_probs=94.8
Q ss_pred ccccCcCCCcEEecC--CCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHH
Q 027527 69 EDTKNLLDTVKVYDV--NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (222)
Q Consensus 69 ~~~g~~apdf~L~D~--~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~ 146 (222)
..+|+.+|+|++.|. +| .++|+++.+++++||+|||+.|||+|..|++.|++++++|++.|++||+|+.|+.+..++
T Consensus 3 l~iG~~aP~F~l~~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~ 81 (220)
T 1xcc_A 3 YHLGATFPNFTAKASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDK 81 (220)
T ss_dssp CCTTCBCCCCEECBTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHH
T ss_pred CCCCCCCCCcEeecccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHH
Confidence 568999999999999 99 999999754447899999999999999999999999999999999999999999988888
Q ss_pred HHH-------HcCCCCceeecCChHHHHHcCCc
Q 027527 147 FSE-------QTKFKGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 147 f~~-------~~~~pfpil~Dpd~~lyk~lGl~ 172 (222)
|.+ +.+++||+++|+++++.++||+.
T Consensus 82 ~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv~ 114 (220)
T 1xcc_A 82 WIEDIKYYGKLNKWEIPIVCDESRELANKLKIM 114 (220)
T ss_dssp HHHHHHHHHTCSCCCCCEEECTTSHHHHHHTCE
T ss_pred HHHHHHHHhcCCCCcceeEECchhHHHHHhCCC
Confidence 887 57899999999999999999995
No 29
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.80 E-value=3.6e-19 Score=146.29 Aligned_cols=105 Identities=10% Similarity=0.046 Sum_probs=95.1
Q ss_pred CCccccCcCCCcEEecCC-------------C--CeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCC
Q 027527 67 VSEDTKNLLDTVKVYDVN-------------G--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGV 131 (222)
Q Consensus 67 ~~~~~g~~apdf~L~D~~-------------G--~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv 131 (222)
+...+|+.+|+|++.|.+ | +.++|+++ +++++||.|++++|||+|+.+++.|+++++++.+.|+
T Consensus 2 ~~l~~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v 80 (195)
T 2bmx_A 2 PLLTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEH-PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDA 80 (195)
T ss_dssp CBCCTTCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSS-TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTE
T ss_pred CcCCCCCcCCCcCcccccccccccccccccCCCccEeeHHHh-CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 446789999999999988 7 89999997 4555555555599999999999999999999998999
Q ss_pred EEEEEcCCCHHHHHHHHHHc----CCCCceeecCChHHHHHcCCc
Q 027527 132 ALVLIGPGSVEQARTFSEQT----KFKGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 132 ~lvaIs~~s~~~i~~f~~~~----~~pfpil~Dpd~~lyk~lGl~ 172 (222)
++|+|+.++.+.+++|++++ +++|+++.|++..+++.||+.
T Consensus 81 ~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 125 (195)
T 2bmx_A 81 QILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGVL 125 (195)
T ss_dssp EEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTCB
T ss_pred EEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCCc
Confidence 99999999999999999998 899999999999999999998
No 30
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.80 E-value=3.7e-19 Score=144.88 Aligned_cols=102 Identities=11% Similarity=0.178 Sum_probs=93.5
Q ss_pred cccCcCCCcEEecCCCC----eEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHH
Q 027527 70 DTKNLLDTVKVYDVNGN----AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQAR 145 (222)
Q Consensus 70 ~~g~~apdf~L~D~~G~----~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~ 145 (222)
.+|+.+|+|++.|.+|+ .++|+++ +++++||.|+|++|||+|+.+++.|+++++++.+.|+++++|+.|+++.++
T Consensus 2 ~~G~~~P~f~l~~~~g~~~~~~~~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~ 80 (187)
T 1we0_A 2 LIGTEVQPFRAQAFQSGKDFFEVTEADL-KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHK 80 (187)
T ss_dssp CTTCBCCCCEEEEECSSSCCEEEETTTT-SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHH
T ss_pred CCCCcCCCeEEeccCCCccceEecHHHH-CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHH
Confidence 57899999999999999 9999997 455555555559999999999999999999999999999999999999999
Q ss_pred HHHHHc----CCCCceeecCChHHHHHcCCc
Q 027527 146 TFSEQT----KFKGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 146 ~f~~~~----~~pfpil~Dpd~~lyk~lGl~ 172 (222)
+|++++ +++|+++.|++.++.+.||+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 111 (187)
T 1we0_A 81 AWHENSPAVGSIEYIMIGDPSQTISRQFDVL 111 (187)
T ss_dssp HHHHSCHHHHTCCSEEEECTTCHHHHHTTCE
T ss_pred HHHHHhccccCCCceEEECCchHHHHHhCCC
Confidence 999998 899999999999999999997
No 31
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.80 E-value=8.4e-20 Score=152.11 Aligned_cols=102 Identities=6% Similarity=0.062 Sum_probs=94.7
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHH
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~ 148 (222)
.++|+.+|+|+|.|.+|+.++|+++ +++++||.|++..||++|+.+++.|+++++++ .|++||+|+.|+++.+++|+
T Consensus 52 l~~G~~aPdf~l~d~~G~~v~L~d~-~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D~~~~~~~~~ 128 (200)
T 3zrd_A 52 PQIGDKAKDFTLVAKDLSDVALSSF-AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSDLPFAQSRFC 128 (200)
T ss_dssp CCTTCBCCCCEEECTTSCEEEGGGG-TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESSCHHHHTTCT
T ss_pred CCCCCCCCCeEEECCCCCEEcHHHh-CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECCCHHHHHHHH
Confidence 6789999999999999999999997 56666676667899999999999999999999 78999999999999999999
Q ss_pred HHcCC-CCceeecC-ChHHHHHcCCcc
Q 027527 149 EQTKF-KGEVYADP-NHSSYEALSFVS 173 (222)
Q Consensus 149 ~~~~~-pfpil~Dp-d~~lyk~lGl~~ 173 (222)
+++++ +|++++|+ +.++.++||+..
T Consensus 129 ~~~~~~~f~~l~D~~~~~~~~~ygv~~ 155 (200)
T 3zrd_A 129 GAEGLSNVITLSTLRGADFKQAYGVAI 155 (200)
T ss_dssp TTTTCTTEEEEETTSCTHHHHHTTCEE
T ss_pred HHcCCCCceEEecCchHHHHHHhCcee
Confidence 99999 99999999 999999999963
No 32
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.79 E-value=2.8e-19 Score=147.04 Aligned_cols=103 Identities=12% Similarity=0.080 Sum_probs=94.6
Q ss_pred cccCcCCCcEEecC--CCC---eEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHH
Q 027527 70 DTKNLLDTVKVYDV--NGN---AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (222)
Q Consensus 70 ~~g~~apdf~L~D~--~G~---~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i 144 (222)
.+|+.+|+|++.|. +|+ .++|+++++++++||.|++++|||+|+.+++.|+++++++.+.|+++|+|+.|+++.+
T Consensus 2 ~~G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~ 81 (198)
T 1zof_A 2 VVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVH 81 (198)
T ss_dssp CTTSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHH
T ss_pred CCCCcCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHH
Confidence 57999999999998 999 9999997567665555555999999999999999999999999999999999999999
Q ss_pred HHHHHH-------cCCCCceeecCChHHHHHcCCc
Q 027527 145 RTFSEQ-------TKFKGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 145 ~~f~~~-------~~~pfpil~Dpd~~lyk~lGl~ 172 (222)
++|+++ ++++|+++.|++.++.+.||+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 116 (198)
T 1zof_A 82 FAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVL 116 (198)
T ss_dssp HHHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCE
T ss_pred HHHHHhhhhcccccCceeEEEECCchHHHHHhCCc
Confidence 999998 8999999999999999999997
No 33
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.79 E-value=1.5e-19 Score=149.98 Aligned_cols=103 Identities=15% Similarity=0.191 Sum_probs=95.8
Q ss_pred cccCcCCCcEEec--C---------CC----CeEeCCCccCCCeEEEEEEcCCCChhHH-HHHHHHHHhHHHH-HhCCCE
Q 027527 70 DTKNLLDTVKVYD--V---------NG----NAIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVM-DASGVA 132 (222)
Q Consensus 70 ~~g~~apdf~L~D--~---------~G----~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~-~el~~L~~~~~~l-~~~gv~ 132 (222)
++|+++|+|+|.+ . +| +.++|+++++++++||+||++.|||.|. .|++.+++.+++| ++.|++
T Consensus 2 ~vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~ 81 (182)
T 1xiy_A 2 KENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFD 81 (182)
T ss_dssp CTTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCS
T ss_pred CCCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCc
Confidence 5799999999998 4 77 7999999778889999999999999999 9999999999999 999995
Q ss_pred -EEEEcCCCHHHHHHHHHHcCC-CCceeecCChHHHHHcCCc
Q 027527 133 -LVLIGPGSVEQARTFSEQTKF-KGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 133 -lvaIs~~s~~~i~~f~~~~~~-pfpil~Dpd~~lyk~lGl~ 172 (222)
|++|+.+++...++|+++.++ +|++++|+++++.++||+.
T Consensus 82 ~V~gvS~D~~~~~~~~~~~~~~~~f~lLsD~~~~~a~~yGv~ 123 (182)
T 1xiy_A 82 DIYCITNNDIYVLKSWFKSMDIKKIKYISDGNSSFTDSMNML 123 (182)
T ss_dssp EEEEEESSCHHHHHHHHHHTTCCSSEEEECTTSHHHHHTTCE
T ss_pred EEEEEeCCCHHHHHHHHHHcCCCCceEEEeCchHHHHHhCCc
Confidence 999999999999999999999 6999999999999999985
No 34
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.79 E-value=1.7e-19 Score=153.97 Aligned_cols=105 Identities=10% Similarity=0.057 Sum_probs=97.1
Q ss_pred CccccCcCCCcE----EecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHH
Q 027527 68 SEDTKNLLDTVK----VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (222)
Q Consensus 68 ~~~~g~~apdf~----L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~ 143 (222)
..++|++||||+ +.|.+|+.++|+|+ +++++||+|++..|||.|..|+.++++.+++|++.|++|++|+.|+...
T Consensus 25 ~~~vG~~APdF~~~a~l~d~~g~~vsLsd~-~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~s 103 (219)
T 3tue_A 25 NAKINSPAPSFEEVALMPNGSFKKISLSSY-KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYA 103 (219)
T ss_dssp CCCTTSBCCCCEEEEECTTSCEEEEEGGGG-TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHH
T ss_pred ccccCCcCCCCcccccccCCCCcEEehHHh-CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhh
Confidence 358999999998 55889999999997 5789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHc-------CCCCceeecCChHHHHHcCCcc
Q 027527 144 ARTFSEQT-------KFKGEVYADPNHSSYEALSFVS 173 (222)
Q Consensus 144 i~~f~~~~-------~~pfpil~Dpd~~lyk~lGl~~ 173 (222)
.++|+++. +++||+++|+++++.++||+..
T Consensus 104 h~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~ 140 (219)
T 3tue_A 104 HLQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLE 140 (219)
T ss_dssp HHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEE
T ss_pred HHHHhhhhHHhcCccccccccccCcccHHHHHcCCcc
Confidence 99998764 6899999999999999999953
No 35
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.78 E-value=4.7e-19 Score=137.54 Aligned_cols=110 Identities=10% Similarity=0.014 Sum_probs=92.8
Q ss_pred CCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC-CHHHHH
Q 027527 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQAR 145 (222)
Q Consensus 67 ~~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~-s~~~i~ 145 (222)
....+|+.+|+|++ |.+|+.++|+++ ++ +++|++||++||++|+++++.|+++++++.+.|+.+|+|+.+ +.+..+
T Consensus 5 ~~l~~G~~~P~f~l-~~~g~~~~l~~~-~g-k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~ 81 (143)
T 4fo5_A 5 EGVNPGDLAPRIEF-LGNDAKASFHNQ-LG-RYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFT 81 (143)
T ss_dssp BSSSTTSBCCCCCC------CCCSCCS-SC-CEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHH
T ss_pred cccCCcccCCceEE-cCCCCEEEHHHh-CC-CEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHH
Confidence 34789999999999 999999999997 34 578889999999999999999999999999889999999998 557999
Q ss_pred HHHHHcCCCC-ceeecCC---hHHHHHcCCccccceee
Q 027527 146 TFSEQTKFKG-EVYADPN---HSSYEALSFVSGVLVTF 179 (222)
Q Consensus 146 ~f~~~~~~pf-pil~Dpd---~~lyk~lGl~~~~~~~~ 179 (222)
+|.++++++| +++.|.+ ..+.+.||+...+...+
T Consensus 82 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~l 119 (143)
T 4fo5_A 82 ETVKIDKLDLSTQFHEGLGKESELYKKYDLRKGFKNFL 119 (143)
T ss_dssp HHHHHHTCCGGGEEECTTGGGSHHHHHTTGGGCCCEEE
T ss_pred HHHHHhCCCCceeeecccccchHHHHHcCCCCCCcEEE
Confidence 9999999999 7899984 68999999987765444
No 36
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.78 E-value=7.1e-19 Score=145.49 Aligned_cols=104 Identities=10% Similarity=0.126 Sum_probs=94.1
Q ss_pred CccccCcCCCcEEecC--CC--CeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHH
Q 027527 68 SEDTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (222)
Q Consensus 68 ~~~~g~~apdf~L~D~--~G--~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~ 143 (222)
...+|+++|+|++.|. +| +.++|+++ +++++||.|+++.|||+|+.+++.|+++++++++.|+++|+|+.|+.+.
T Consensus 5 ~~~~G~~aP~f~l~~~~~~g~~~~v~l~~~-~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~ 83 (202)
T 1uul_A 5 EAEDLHPAPDFNETALMPNGTFKKVALTSY-KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYS 83 (202)
T ss_dssp CCCTTSBCCCCEEEEECTTSCEEEEEGGGG-TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred cccCCCcCCCcEeeeeecCCCccEEEHHHh-CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 3578999999999997 78 89999997 4555555554599999999999999999999999999999999999999
Q ss_pred HHHHHHHc-------CCCCceeecCChHHHHHcCCc
Q 027527 144 ARTFSEQT-------KFKGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 144 i~~f~~~~-------~~pfpil~Dpd~~lyk~lGl~ 172 (222)
+++|++++ +++|+++.|++.++.+.||+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~ 119 (202)
T 1uul_A 84 HLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVL 119 (202)
T ss_dssp HHHHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCE
T ss_pred HHHHHHHHHhhCCCCCCceeEEECCchHHHHHcCCc
Confidence 99999988 899999999999999999997
No 37
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.78 E-value=1.2e-18 Score=135.07 Aligned_cols=110 Identities=10% Similarity=0.036 Sum_probs=98.0
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHH---hHHHHHhCCCEEEEEcCCCH-HH
Q 027527 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAA---KKDVMDASGVALVLIGPGSV-EQ 143 (222)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~---~~~~l~~~gv~lvaIs~~s~-~~ 143 (222)
...+|+++|+|++.|.+|+.++|+++ ++ +.+|++||++||++|+++++.|++ +++++++.++.+|+|+.++. +.
T Consensus 4 ~~~~G~~ap~f~l~~~~g~~~~l~~~-~g-k~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~ 81 (142)
T 3eur_A 4 KNRLGTKALNFTYTLDSGVKGTLYQF-PA-EYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDE 81 (142)
T ss_dssp TTCTTSBCCCCEEEETTSCEEETTTC-CC-SEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHH
T ss_pred hhcCCCccCCcEEEcCCCCEeeHHHc-CC-CEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHH
Confidence 35789999999999999999999997 34 678888899999999999999999 99999999999999999866 78
Q ss_pred HHHHHHHcCCCCceeecCChH--HHHHcCCccccceee
Q 027527 144 ARTFSEQTKFKGEVYADPNHS--SYEALSFVSGVLVTF 179 (222)
Q Consensus 144 i~~f~~~~~~pfpil~Dpd~~--lyk~lGl~~~~~~~~ 179 (222)
.++|.++++++++.+.|++.. +.+.|++...+...+
T Consensus 82 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~l 119 (142)
T 3eur_A 82 WKKHRNDFAKEWTNGYDKELVIKNKNLYDLRAIPTLYL 119 (142)
T ss_dssp HHHHGGGSCTTSEEEECTTCHHHHTTCSCCTTCSEEEE
T ss_pred HHHHHHhcccccccccCccchhhhhhhcCCCcCCeEEE
Confidence 899999999999999999976 788899877766544
No 38
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.78 E-value=4.2e-19 Score=151.30 Aligned_cols=103 Identities=14% Similarity=0.130 Sum_probs=95.7
Q ss_pred ccccCcCCCcEEe---cCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHH
Q 027527 69 EDTKNLLDTVKVY---DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQAR 145 (222)
Q Consensus 69 ~~~g~~apdf~L~---D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~ 145 (222)
.++|++||||++. |.+|+.++|+|+ +++++||.|++..|||.|..|+..+++.+++|++.|++|++|+.|+....+
T Consensus 23 ~~VG~~APdF~l~a~~d~~~~~vsLsd~-~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh~ 101 (216)
T 3sbc_A 23 AQVQKQAPTFKKTAVVDGVFDEVSLDKY-KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLL 101 (216)
T ss_dssp CCTTSBCCCCCEEEEETTEEEEECGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHH
T ss_pred hhcCCcCCCCCCcceECCCCcEEehHHh-CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhHH
Confidence 5899999999865 788899999997 578889989999999999999999999999999999999999999999999
Q ss_pred HHHHHc-------CCCCceeecCChHHHHHcCCc
Q 027527 146 TFSEQT-------KFKGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 146 ~f~~~~-------~~pfpil~Dpd~~lyk~lGl~ 172 (222)
+|++.. +++||+++|+++++.++||+.
T Consensus 102 aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~ 135 (216)
T 3sbc_A 102 AWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVL 135 (216)
T ss_dssp HHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCE
T ss_pred HHHHHHHHhCCccCcccceEeCCCCHHHHHcCCe
Confidence 999765 589999999999999999995
No 39
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.78 E-value=1.4e-18 Score=135.91 Aligned_cols=110 Identities=10% Similarity=-0.015 Sum_probs=99.5
Q ss_pred CccccCcCCCcEEecCCCCeEeCC--CccCCCeEEEEEEcCCCChh--HHHHHHHHHHhHHHH-HhCCCEEEEEcCCCH-
Q 027527 68 SEDTKNLLDTVKVYDVNGNAIPIS--DLWKDRKAVVAFARHFGCVL--CRKRADYLAAKKDVM-DASGVALVLIGPGSV- 141 (222)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Ls--dl~~~~~vvVvF~R~~~Cp~--C~~el~~L~~~~~~l-~~~gv~lvaIs~~s~- 141 (222)
...+|+++|+|++.|.+|+.++|+ ++ .++++|++||++||++ |+.+++.|+++++++ ++.|+.+++|+.++.
T Consensus 4 ~l~~G~~~p~f~l~~~~g~~~~l~~~~~--~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~ 81 (150)
T 3fw2_A 4 KSEIGKYAPFFSLPNAKGEKITRSSDAF--KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDK 81 (150)
T ss_dssp TTSTTSBCCCCCEEBTTCCEECTTSTTT--TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCH
T ss_pred cccCCCcCCccEeECCCCCEEecchhhh--CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCH
Confidence 468899999999999999999999 87 3457888889999999 999999999999999 888999999999865
Q ss_pred HHHHHHHHHcCCCCceeecC---ChHHHHHcCCccccceee
Q 027527 142 EQARTFSEQTKFKGEVYADP---NHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 142 ~~i~~f~~~~~~pfpil~Dp---d~~lyk~lGl~~~~~~~~ 179 (222)
+.+++|.++++++|+++.|+ +..+.+.||+...+...+
T Consensus 82 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~l 122 (150)
T 3fw2_A 82 QQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIYKIPANIL 122 (150)
T ss_dssp HHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHHHhCCCceEEEcCcccchHHHHHcCCCccCeEEE
Confidence 79999999999999999999 779999999987766555
No 40
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.78 E-value=1.5e-18 Score=135.97 Aligned_cols=109 Identities=19% Similarity=0.247 Sum_probs=97.7
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCC-HHHHHHH
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTF 147 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s-~~~i~~f 147 (222)
..+|+.+|+|++.|.+|+.++|+++ ++ +.+|++|++.||++|+++++.|+++++++.+.|+++++|+.++ .+..++|
T Consensus 3 l~~g~~~p~f~l~~~~G~~~~l~~~-~g-k~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~ 80 (152)
T 2lrn_A 3 LATGSVAPAITGIDLKGNSVSLNDF-KG-KYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKA 80 (152)
T ss_dssp SCTTEECCCCEEECSSSCEEESGGG-TT-SEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHH
T ss_pred ccCCCcCCCceeEcCCCCEEeHHHc-CC-CEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHH
Confidence 5689999999999999999999997 34 5677777899999999999999999999998999999999984 5889999
Q ss_pred HHHcCCCCceeecC---ChHHHHHcCCccccceee
Q 027527 148 SEQTKFKGEVYADP---NHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 148 ~~~~~~pfpil~Dp---d~~lyk~lGl~~~~~~~~ 179 (222)
.++++++|+++.|+ +..+.+.||+...+...+
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~l 115 (152)
T 2lrn_A 81 IEEDKSYWNQVLLQKDDVKDVLESYCIVGFPHIIL 115 (152)
T ss_dssp HHHHTCCSEEEEECHHHHHHHHHHTTCCSSCEEEE
T ss_pred HHHhCCCCeEEecccchhHHHHHHhCCCcCCeEEE
Confidence 99999999999999 799999999987766544
No 41
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.78 E-value=1.8e-18 Score=134.90 Aligned_cols=107 Identities=22% Similarity=0.256 Sum_probs=96.4
Q ss_pred ccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC-CHHHHHHHHH
Q 027527 71 TKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSE 149 (222)
Q Consensus 71 ~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~-s~~~i~~f~~ 149 (222)
+|+.+|+|++.|.+|+.++|+++ ++ +.+|++|++.||++|+++++.|.++++++.+.++.+++|+.+ +.+.+++|.+
T Consensus 2 ~G~~~p~~~l~~~~g~~~~l~~~-~g-k~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~ 79 (151)
T 2f9s_A 2 EGSDAPNFVLEDTNGKRIELSDL-KG-KGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMK 79 (151)
T ss_dssp CCEECCCCEEECTTCCEEEGGGG-TT-SEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHH
T ss_pred CCCcCCcceeEcCCCCEEEHHHc-CC-CEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHH
Confidence 68899999999999999999997 44 456777779999999999999999999999889999999986 5689999999
Q ss_pred HcCCCCceeecCChHHHHHcCCccccceee
Q 027527 150 QTKFKGEVYADPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 150 ~~~~pfpil~Dpd~~lyk~lGl~~~~~~~~ 179 (222)
+++++|+++.|++..+.+.||+...+...+
T Consensus 80 ~~~~~~~~~~d~~~~~~~~~~v~~~P~~~l 109 (151)
T 2f9s_A 80 SYGVNFPVVLDTDRQVLDAYDVSPLPTTFL 109 (151)
T ss_dssp HHTCCSCEEEETTSHHHHHTTCCSSCEEEE
T ss_pred HcCCCceEEECCchHHHHhcCCCCCCeEEE
Confidence 999999999999999999999987776444
No 42
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.78 E-value=1.5e-18 Score=141.20 Aligned_cols=111 Identities=15% Similarity=0.135 Sum_probs=100.0
Q ss_pred CccccCcCCCcEEe-cCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcC--------
Q 027527 68 SEDTKNLLDTVKVY-DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP-------- 138 (222)
Q Consensus 68 ~~~~g~~apdf~L~-D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~-------- 138 (222)
...+|+.+|+|++. |.+|+.++|+++ ++++.+|++||+.||++|+++++.|+++++++.+.|+++++|+.
T Consensus 17 ~~~~g~~~p~f~l~~~~~G~~~~l~~~-~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~ 95 (196)
T 2ywi_A 17 MFPLGKQAPPFALTNVIDGNVVRLEDV-KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPE 95 (196)
T ss_dssp CCCTTCBCCCCEEEETTTCCEEEHHHH-CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGG
T ss_pred CCCcCCcCCceeeeecCCCCEEeHHHh-CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccc
Confidence 36789999999999 999999999997 45556888889999999999999999999999989999999998
Q ss_pred CCHHHHHHHHHHcCCCCceeecCChHHHHHcCCccccceee
Q 027527 139 GSVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 139 ~s~~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~~~~~~ 179 (222)
++.+.+++|.++++++|+++.|++..+.+.||+...+...+
T Consensus 96 d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~l 136 (196)
T 2ywi_A 96 DSPENMKKVAEELGYPFPYLYDETQEVAKAYDAACTPDFYI 136 (196)
T ss_dssp GSHHHHHHHHHHHTCCSCEEECSSCHHHHHHTCCEESEEEE
T ss_pred cCHHHHHHHHHHcCCCceEEECCchHHHHHhCCCCCCeEEE
Confidence 67899999999999999999999999999999976654433
No 43
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.78 E-value=3e-18 Score=133.32 Aligned_cols=108 Identities=15% Similarity=0.108 Sum_probs=97.7
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC-CHHHHHHH
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTF 147 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~-s~~~i~~f 147 (222)
.++|+++|+|++.| +|+.++|+++ ++ +.+|++|++.|||.|+.+++.|.++++++.+.|+++++|+.+ +.+.+++|
T Consensus 3 l~~G~~~P~f~l~~-~g~~~~l~~~-~g-k~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~ 79 (152)
T 3gl3_A 3 LDKGDKAPDFALPG-KTGVVKLSDK-TG-SVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKF 79 (152)
T ss_dssp CCTTSBCCCCEEEB-SSSEEEGGGG-TT-SEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHH
T ss_pred CCCCCcCCceEeeC-CCCeEeHHHh-CC-CEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHH
Confidence 57899999999999 9999999997 34 467777779999999999999999999999999999999988 56899999
Q ss_pred HHHcCCCCceeecCChHHHHHcCCccccceee
Q 027527 148 SEQTKFKGEVYADPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 148 ~~~~~~pfpil~Dpd~~lyk~lGl~~~~~~~~ 179 (222)
.++++++|+++.|++..+.+.||+...+...+
T Consensus 80 ~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~l 111 (152)
T 3gl3_A 80 LAQVPAEFTVAFDPKGQTPRLYGVKGMPTSFL 111 (152)
T ss_dssp HHHSCCCSEEEECTTCHHHHHTTCCSSSEEEE
T ss_pred HHHcCCCCceeECCcchhHHHcCCCCCCeEEE
Confidence 99999999999999999999999987776444
No 44
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.78 E-value=5.9e-19 Score=148.13 Aligned_cols=105 Identities=9% Similarity=-0.010 Sum_probs=92.2
Q ss_pred CCccccCcCCCcEEecC---CCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHH
Q 027527 67 VSEDTKNLLDTVKVYDV---NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (222)
Q Consensus 67 ~~~~~g~~apdf~L~D~---~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~ 143 (222)
....+|+.+|+|++.|. +|+.++|+++ +++++||.|++++|||+|+.+++.|+++++++++.|++||+|+.|+++.
T Consensus 17 ~~~~~G~~aP~f~l~~~~~~~g~~v~l~d~-~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~ 95 (211)
T 2pn8_A 17 NLYFQSMPAPYWEGTAVIDGEFKELKLTDY-RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFT 95 (211)
T ss_dssp --CCSSCBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred ccCCCCCcCCCeEeecccCCCCcEEEHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
Confidence 34678999999999974 5689999997 4665554444499999999999999999999999999999999999999
Q ss_pred HHHHHHHc-------CCCCceeecCChHHHHHcCCc
Q 027527 144 ARTFSEQT-------KFKGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 144 i~~f~~~~-------~~pfpil~Dpd~~lyk~lGl~ 172 (222)
+++|+++. +++|+++.|+++++.++||+.
T Consensus 96 ~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~ 131 (211)
T 2pn8_A 96 HLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVY 131 (211)
T ss_dssp HHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHTTCE
T ss_pred HHHHHHHhhhccCccCCceEEEECCchHHHHHcCCc
Confidence 99999988 789999999999999999994
No 45
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.78 E-value=7.7e-19 Score=150.66 Aligned_cols=105 Identities=10% Similarity=0.020 Sum_probs=93.4
Q ss_pred CCccccCcCCCcEEe---cCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHH
Q 027527 67 VSEDTKNLLDTVKVY---DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (222)
Q Consensus 67 ~~~~~g~~apdf~L~---D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~ 143 (222)
....+|+++|+|++. |.+|+.++|+++ +++++||.|++..|||+|+.+++.|++++++|++.|++||+|+.|+.+.
T Consensus 46 ~~l~vG~~aPdF~l~~~~d~~G~~vsLsd~-~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~ 124 (240)
T 3qpm_A 46 SKAKISKPAPQWEGTAVINGEFKELKLSDY-RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFT 124 (240)
T ss_dssp CSCCTTSBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHH
T ss_pred CcCCCCCCCCCcEeeeeeCCCCcEEEHHHh-CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
Confidence 446889999999977 455779999997 5666655555559999999999999999999999999999999999999
Q ss_pred HHHHHHHc-------CCCCceeecCChHHHHHcCCc
Q 027527 144 ARTFSEQT-------KFKGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 144 i~~f~~~~-------~~pfpil~Dpd~~lyk~lGl~ 172 (222)
.++|+++. +++|++++|++.++.++||+.
T Consensus 125 ~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~ 160 (240)
T 3qpm_A 125 HLAWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVY 160 (240)
T ss_dssp HHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCE
T ss_pred HHHHHHHHHhhcCCCCCceeEEeCchHHHHHHhCCc
Confidence 99999987 899999999999999999996
No 46
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.78 E-value=2.7e-18 Score=133.87 Aligned_cols=108 Identities=16% Similarity=0.164 Sum_probs=97.6
Q ss_pred cccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCC--HHHHHHH
Q 027527 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS--VEQARTF 147 (222)
Q Consensus 70 ~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s--~~~i~~f 147 (222)
.+|+++|+|++.|.+|+.++++++ ++ +.+|++|++.||+.|+++++.|+++++++.+.++.+++|+.+. .+.+++|
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~-~g-k~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~ 80 (154)
T 3kcm_A 3 LEENPAPDFTLNTLNGEVVKLSDL-KG-QVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEF 80 (154)
T ss_dssp CTTSBCCCCEEECTTSCEEEGGGG-TT-SEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHH
T ss_pred CCCCCCCCeEEEcCCCCEEehhhc-CC-CEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHH
Confidence 679999999999999999999997 44 5667777799999999999999999999998999999999987 6889999
Q ss_pred HHHcCCCCceeecCChHHHHHcCCccccceee
Q 027527 148 SEQTKFKGEVYADPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 148 ~~~~~~pfpil~Dpd~~lyk~lGl~~~~~~~~ 179 (222)
.++++++|+++.|++..+.+.||+...+...+
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~l 112 (154)
T 3kcm_A 81 FRKTGFTLPVLLDADKRVGKLYGTTGVPETFV 112 (154)
T ss_dssp HHHHCCCCCEEECTTCHHHHHHTCCSBCEEEE
T ss_pred HHHcCCCeeEEecCchHHHHHhCCCCCCeEEE
Confidence 99999999999999999999999987774433
No 47
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.77 E-value=5.4e-19 Score=153.27 Aligned_cols=107 Identities=8% Similarity=0.017 Sum_probs=96.0
Q ss_pred CCCCccccCcCCCcEEe---cCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 65 PSVSEDTKNLLDTVKVY---DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 65 ~~~~~~~g~~apdf~L~---D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
......+|+++|+|++. |.+|+.++|+++ +++++||+|+++.|||+|..+++.|++++++|++.|++||+|+.|+.
T Consensus 58 ~~~~l~vG~~aPdF~l~~l~d~~G~~vsLsd~-kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~ 136 (254)
T 3tjj_A 58 HLSKAKISKPAPYWEGTAVIDGEFKELKLTDY-RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQ 136 (254)
T ss_dssp -CCCCCTTSBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCH
T ss_pred cccccCCCCCCCCcEeeeecCCCCcEEeHHHH-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCH
Confidence 44557899999999976 557899999997 56677777777999999999999999999999999999999999999
Q ss_pred HHHHHHHHHc-------CCCCceeecCChHHHHHcCCc
Q 027527 142 EQARTFSEQT-------KFKGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 142 ~~i~~f~~~~-------~~pfpil~Dpd~~lyk~lGl~ 172 (222)
+..++|+++. +++|++++|++.++.+.||+.
T Consensus 137 ~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ygv~ 174 (254)
T 3tjj_A 137 FTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVY 174 (254)
T ss_dssp HHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHHHHTCE
T ss_pred HHHHHHHHHHHHhcCCcccccceeeCcHHHHHHHcCCc
Confidence 9999999887 799999999999999999995
No 48
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.77 E-value=2.2e-18 Score=141.79 Aligned_cols=104 Identities=13% Similarity=0.102 Sum_probs=93.9
Q ss_pred CccccCcCCCcEEecC-CC--CeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHH
Q 027527 68 SEDTKNLLDTVKVYDV-NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (222)
Q Consensus 68 ~~~~g~~apdf~L~D~-~G--~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i 144 (222)
...+|+++|+|++.|. +| +.++|+++ +++++||.|+++.||++|+.+++.|+++++++++.|+++|+|+.++.+..
T Consensus 4 ~l~~G~~aP~f~l~~~~~g~~~~v~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~ 82 (197)
T 1qmv_A 4 NARIGKPAPDFKATAVVDGAFKEVKLSDY-KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTH 82 (197)
T ss_dssp TBCTTSBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHH
T ss_pred cccCCCCCCCeEeEeecCCCccEEEHHHH-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 3678999999999998 88 99999997 46655555544999999999999999999999999999999999999999
Q ss_pred HHHHHHc-------CCCCceeecCChHHHHHcCCc
Q 027527 145 RTFSEQT-------KFKGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 145 ~~f~~~~-------~~pfpil~Dpd~~lyk~lGl~ 172 (222)
++|++++ +++|+++.|++.++.+.||+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~ 117 (197)
T 1qmv_A 83 LAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVL 117 (197)
T ss_dssp HHHHTSCGGGTCCCSCSSCEEECTTCHHHHHTTCE
T ss_pred HHHHHHHHhhCCCCCCceEEEECCcHHHHHHcCCc
Confidence 9999987 899999999999999999997
No 49
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.77 E-value=1.8e-18 Score=145.90 Aligned_cols=103 Identities=12% Similarity=0.059 Sum_probs=92.3
Q ss_pred CccccCcCCCcEEec---CCCCeEeCCCccCCCeEEEEEEc-CCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHH
Q 027527 68 SEDTKNLLDTVKVYD---VNGNAIPISDLWKDRKAVVAFAR-HFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (222)
Q Consensus 68 ~~~~g~~apdf~L~D---~~G~~v~Lsdl~~~~~vvVvF~R-~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~ 143 (222)
...+|+++|+|+|.| .+|+.++|+++ +++ .+|++|| .+||++|+.+++.|+++++++++.|++||+|+.|+.+.
T Consensus 39 ~l~~G~~aP~f~l~~~~d~~G~~v~l~~~-~Gk-~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~ 116 (222)
T 3ztl_A 39 VLLPNRPAPEFKGQAVINGEFKEICLKDY-RGK-YVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYS 116 (222)
T ss_dssp -CCSSEECCCCEEEEEETTEEEEEEGGGG-TTS-EEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred cccCCCCCCCeEEecccCCCCcEEeHHHh-CCC-eEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
Confidence 468899999999995 45699999997 455 5566666 59999999999999999999999999999999999999
Q ss_pred HHHHHHHc-------CCCCceeecCChHHHHHcCCc
Q 027527 144 ARTFSEQT-------KFKGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 144 i~~f~~~~-------~~pfpil~Dpd~~lyk~lGl~ 172 (222)
.++|+++. +++|+++.|++..+.+.||+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~ 152 (222)
T 3ztl_A 117 HLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVF 152 (222)
T ss_dssp HHHHHHSCGGGTSCCSCSSCEEECSSSHHHHHTTCB
T ss_pred HHHHHHHhhhhccccccceeEEeCCchHHHHHcCCe
Confidence 99999887 899999999999999999997
No 50
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.77 E-value=1.7e-18 Score=135.85 Aligned_cols=107 Identities=13% Similarity=0.124 Sum_probs=95.5
Q ss_pred ccCcCCCcEEec--CCCCeEeCCCccCCCeEEEEEEcCCCChhHHHH-HHHHHHhHHHHHhCCCEEEEEcC-------CC
Q 027527 71 TKNLLDTVKVYD--VNGNAIPISDLWKDRKAVVAFARHFGCVLCRKR-ADYLAAKKDVMDASGVALVLIGP-------GS 140 (222)
Q Consensus 71 ~g~~apdf~L~D--~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~e-l~~L~~~~~~l~~~gv~lvaIs~-------~s 140 (222)
.|+.+|+|++.| .+|+.++|+++ .++++|++||++||++|+++ ++.|+++++++.+.++.+|+|+. ++
T Consensus 2 ~g~~aP~f~l~~~~~~g~~~~l~~~--~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~ 79 (158)
T 3eyt_A 2 NAMKAPELQIQQWFNSATDLTLADL--RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMT 79 (158)
T ss_dssp CCEECCCCCEEEEESCSSCCCTGGG--TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSC
T ss_pred CCCcCCCceehhhhcCCCccCHHHh--CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCC
Confidence 588999999999 48999999997 34577888889999999997 99999999999888999999995 58
Q ss_pred HHHHHHHHHHcCCCCceeecCCh-----HHHHHcCCccccceee
Q 027527 141 VEQARTFSEQTKFKGEVYADPNH-----SSYEALSFVSGVLVTF 179 (222)
Q Consensus 141 ~~~i~~f~~~~~~pfpil~Dpd~-----~lyk~lGl~~~~~~~~ 179 (222)
.+.+++|+++++++|+++.|++. .+.+.||+...+...+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~~P~~~l 123 (158)
T 3eyt_A 80 PISLKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQMRGTPSLLL 123 (158)
T ss_dssp HHHHHHHHHHTTCCSCEEEECCCSSSSCHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHHHHcCCCceEEEcCccchhhHHHHHHcCCCCCCEEEE
Confidence 89999999999999999999998 7999999987765544
No 51
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.76 E-value=3.1e-18 Score=138.86 Aligned_cols=109 Identities=16% Similarity=0.117 Sum_probs=97.6
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcC--------C
Q 027527 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------G 139 (222)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~--------~ 139 (222)
...+|+.+|+|++.|.+|+.++|+++ ++ +++|++|+++||++|+++++.|+++++++.+. +++++|+. +
T Consensus 6 ~~~~g~~~p~f~l~~~~G~~~~l~~~-~g-k~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d 82 (188)
T 2cvb_A 6 ELPLESPLIDAELPDPRGGRYRLSQF-HE-PLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPED 82 (188)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGGC-CS-SEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGG
T ss_pred cCCCCCCCCCceeecCCCCEEeHHHh-CC-CEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCcccccccc
Confidence 46789999999999999999999997 34 56777788999999999999999999999887 99999998 6
Q ss_pred CHHHHHHHHHHcCCCCceeecCChHHHHHcCCccccceee
Q 027527 140 SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 140 s~~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~~~~~~ 179 (222)
+.+.+++|.++++++|+++.|++..+.+.||+...+...+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~l 122 (188)
T 2cvb_A 83 APEKMAAFAEEHGIFFPYLLDETQEVAKAYRALRTPEVFL 122 (188)
T ss_dssp SHHHHHHHHHHHTCCSCEEECSSSHHHHHTTCCEESEEEE
T ss_pred CHHHHHHHHHHhCCCceEEECCcchHHHHcCCCCCCeEEE
Confidence 7799999999999999999999999999999976664433
No 52
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.76 E-value=2.2e-18 Score=139.66 Aligned_cols=96 Identities=10% Similarity=0.131 Sum_probs=83.9
Q ss_pred CCCCCCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcC----
Q 027527 63 SPPSVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP---- 138 (222)
Q Consensus 63 ~~~~~~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~---- 138 (222)
+........++.+|+|+|.|.+|+.++|+++ .++++|++||++|||+|+.+++.|+++++++.+.|++||+|+.
T Consensus 6 ~~~~~~~~~~~~~p~f~l~d~~G~~v~l~~~--~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~ 83 (180)
T 3kij_A 6 HHMKFLKPKINSFYAFEVKDAKGRTVSLEKY--KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFG 83 (180)
T ss_dssp ----CCCCCCCCGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCST
T ss_pred hhhhhhcCCcCcccceEEecCCCCEecHHHc--CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccc
Confidence 3445557789999999999999999999997 3458899999999999999999999999999999999999985
Q ss_pred ----CCHHHHHHHHHH-cCCCCceeec
Q 027527 139 ----GSVEQARTFSEQ-TKFKGEVYAD 160 (222)
Q Consensus 139 ----~s~~~i~~f~~~-~~~pfpil~D 160 (222)
++++.+++|+++ ++++|+++.|
T Consensus 84 ~~~~d~~~~~~~~~~~~~~~~~~~~~~ 110 (180)
T 3kij_A 84 ESEPRPSKEVESFARKNYGVTFPIFHK 110 (180)
T ss_dssp TCCCSCHHHHHHHHHHHHCCCSCBBCC
T ss_pred cCCCCCHHHHHHHHHHhcCCCCceeee
Confidence 478999999999 9999999764
No 53
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.76 E-value=8e-18 Score=135.89 Aligned_cols=101 Identities=21% Similarity=0.306 Sum_probs=92.4
Q ss_pred CccccCcCCCcEEecC--CCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCC------EEEEEcCC
Q 027527 68 SEDTKNLLDTVKVYDV--NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGV------ALVLIGPG 139 (222)
Q Consensus 68 ~~~~g~~apdf~L~D~--~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv------~lvaIs~~ 139 (222)
....|+++|+|++.|. +|+.++|+++ ++ +++|++|++.||++|+++++.|+++++++.+.|+ ++++|+.+
T Consensus 30 ~~~~g~~~p~f~l~~~~~~g~~~~l~~~-~g-k~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d 107 (183)
T 3lwa_A 30 DEADRQQLPDIGGDSLMEEGTQINLSDF-EN-QVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVR 107 (183)
T ss_dssp CGGGCCCCCCCEEEBSSSTTCEEEGGGG-TT-SEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECS
T ss_pred ccccCCCCCceeccccccCCcEecHHHh-CC-CEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECC
Confidence 3578999999999999 9999999997 34 5677788899999999999999999999999999 99999998
Q ss_pred C--HHHHHHHHHHcCCCCceeecCChHHHHHcC
Q 027527 140 S--VEQARTFSEQTKFKGEVYADPNHSSYEALS 170 (222)
Q Consensus 140 s--~~~i~~f~~~~~~pfpil~Dpd~~lyk~lG 170 (222)
+ .+.+++|+++++++|+++.|++..+.+.||
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 140 (183)
T 3lwa_A 108 DYSRDIAQDFVTDNGLDYPSIYDPPFMTAASLG 140 (183)
T ss_dssp CCCHHHHHHHHHHTTCCSCEEECTTCGGGGGTT
T ss_pred CCCHHHHHHHHHHcCCCccEEECCcchHHHHhc
Confidence 7 789999999999999999999999999997
No 54
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.76 E-value=2.9e-18 Score=135.36 Aligned_cols=113 Identities=9% Similarity=0.049 Sum_probs=99.8
Q ss_pred CCCCCCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 63 SPPSVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 63 ~~~~~~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
........+|+.+|+|++.|.+|+.++++++ ++ +.+|++|++.||+.|+.+++.|.++++++.+.++.+++|+.++
T Consensus 9 ~~~~~~~~~G~~~p~f~l~~~~g~~~~l~~~-~g-k~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~-- 84 (158)
T 3hdc_A 9 ESDAPLVRTGALAPNFKLPTLSGENKSLAQY-RG-KIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK-- 84 (158)
T ss_dssp CCCSCCCCTTSBCCCCEEECTTSCEEESGGG-TT-SEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS--
T ss_pred ccCCcccCCCCcCCCceeEcCCCCEEehHHh-CC-CEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH--
Confidence 3345557899999999999999999999997 44 4667777799999999999999999999988899999999987
Q ss_pred HHHHHHHHcCCCCceeecCChHHHHHcCCccccceee
Q 027527 143 QARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 143 ~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~~~~~~ 179 (222)
.+++|.++++++|+++.|++..+.+.||+...+...+
T Consensus 85 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~l 121 (158)
T 3hdc_A 85 RFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDTFI 121 (158)
T ss_dssp SCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHHcCCCceEEECchHHHHHHhCCCCcceEEE
Confidence 6788999999999999999999999999987776444
No 55
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.76 E-value=5.3e-18 Score=132.04 Aligned_cols=108 Identities=11% Similarity=0.135 Sum_probs=96.6
Q ss_pred cccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEc--CCCHHHHHHH
Q 027527 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG--PGSVEQARTF 147 (222)
Q Consensus 70 ~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs--~~s~~~i~~f 147 (222)
.+|+.+|+|++.|.+|+.++++++ ++ +.+|++|++.||+.|+++++.|+++++++.+.++.+++|+ .++.+.+++|
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~-~g-k~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~ 80 (153)
T 2l5o_A 3 LDSKTAPAFSLPDLHGKTVSNADL-QG-KVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQY 80 (153)
T ss_dssp -CCTTCCSCEEECTTSCEEEHHHH-TT-CEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHH
T ss_pred CCCCCCCCcEeecCCCCCccHHHh-CC-CEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHH
Confidence 468999999999999999999997 44 5667777799999999999999999999999999999998 5677999999
Q ss_pred HHHcCCCCceeecCChHHHHHcCCccccceee
Q 027527 148 SEQTKFKGEVYADPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 148 ~~~~~~pfpil~Dpd~~lyk~lGl~~~~~~~~ 179 (222)
.++++++|+++.|++..+.+.||+...+...+
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~l 112 (153)
T 2l5o_A 81 VKDYGLPFTVMYDADKAVGQAFGTQVYPTSVL 112 (153)
T ss_dssp HHHTTCCSEEEECSSCHHHHHHTCCSSSEEEE
T ss_pred HHHcCCCceEEcCchHHHHHHcCCCccCeEEE
Confidence 99999999999999999999999987766544
No 56
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.76 E-value=3.9e-18 Score=138.40 Aligned_cols=105 Identities=10% Similarity=0.127 Sum_probs=89.4
Q ss_pred CCCCCCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC---
Q 027527 63 SPPSVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--- 139 (222)
Q Consensus 63 ~~~~~~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~--- 139 (222)
+++....++|+.+|+|++.|.+|+.++|+++ ++ +++|++||++|||+|+++++.|+++++++.+.|+++|+|+.+
T Consensus 15 ~~~~~~~~~g~~~p~f~l~~~~G~~~~l~~~-~g-k~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~ 92 (183)
T 2obi_A 15 CASRDDWRCARSMHEFSAKDIDGHMVNLDKY-RG-FVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFG 92 (183)
T ss_dssp ----CCGGGCCSGGGCEEEBTTSCEEEGGGG-TT-SEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCST
T ss_pred hhcccCCcccCcccceEEEcCCCCEeeHHHc-CC-CEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCC
Confidence 3455567899999999999999999999997 34 578888899999999999999999999999999999999864
Q ss_pred -----CHHHHHHHHHHcCCCCceee--cCChH----HHHHc
Q 027527 140 -----SVEQARTFSEQTKFKGEVYA--DPNHS----SYEAL 169 (222)
Q Consensus 140 -----s~~~i~~f~~~~~~pfpil~--Dpd~~----lyk~l 169 (222)
+++.+++|+++++++|+++. |.+.. +|+.+
T Consensus 93 ~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l 133 (183)
T 2obi_A 93 KQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWM 133 (183)
T ss_dssp TCCCSCHHHHHHHHHTTTCCSEEBCCCCCSSTTSCHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCceEEeeeccCCcchhHHHHHh
Confidence 67899999999999999997 76654 56555
No 57
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.76 E-value=1.2e-18 Score=134.13 Aligned_cols=110 Identities=13% Similarity=0.039 Sum_probs=99.6
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC-CHHHHHH
Q 027527 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQART 146 (222)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~-s~~~i~~ 146 (222)
...+|+++|+|++.|.+|+.++++++ ++ +.+|++|++.||++|+.+++.|.++++++.+.|+.+++|+.+ +.+.+++
T Consensus 4 ~~~~G~~~p~~~l~~~~g~~~~l~~~-~g-k~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~ 81 (148)
T 3hcz_A 4 PLLLGKKAPNLYMTDTTGTYRYLYDV-QA-KYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLK 81 (148)
T ss_dssp CCCTTSBCCCCCCBCTTSCBCCGGGC-CC-SEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHH
T ss_pred ccCCCCcCCceEEecCCCCEEEhHHc-CC-CEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHH
Confidence 36789999999999999999999997 34 567788889999999999999999999999999999999998 5589999
Q ss_pred HHHHcCCC-CceeecCChH--HHHHcCCccccceee
Q 027527 147 FSEQTKFK-GEVYADPNHS--SYEALSFVSGVLVTF 179 (222)
Q Consensus 147 f~~~~~~p-fpil~Dpd~~--lyk~lGl~~~~~~~~ 179 (222)
|.++++++ |+++.|++.. +.+.||+...+...+
T Consensus 82 ~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~P~~~l 117 (148)
T 3hcz_A 82 FIRSKKIGGWLNVRDSKNHTDFKITYDIYATPVLYV 117 (148)
T ss_dssp HHHHHTCTTSEEEECTTCCCCHHHHHCCCSSCEEEE
T ss_pred HHHHcCCCCceEEeccccchhHHHhcCcCCCCEEEE
Confidence 99999999 9999999998 999999987776554
No 58
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.76 E-value=3e-18 Score=144.53 Aligned_cols=103 Identities=11% Similarity=0.051 Sum_probs=93.1
Q ss_pred ccccCcCCCcEEec---CCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHH
Q 027527 69 EDTKNLLDTVKVYD---VNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQAR 145 (222)
Q Consensus 69 ~~~g~~apdf~L~D---~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~ 145 (222)
..+|+++|+|++.+ .+|+.++|+++ +++++||.|+++.|||+|+.+++.|+++++++++.|++||+|+.|+.+..+
T Consensus 27 l~~G~~aP~f~l~~~~~~~g~~v~l~d~-~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~ 105 (220)
T 1zye_A 27 PAVTQHAPYFKGTAVVSGEFKEISLDDF-KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHL 105 (220)
T ss_dssp CCTTSBCCCCEEEEECSSSEEEEEGGGG-TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHH
T ss_pred ccCCCCCCCcEEEeeeCCCCcEEEHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHH
Confidence 67899999999974 67899999997 456655555559999999999999999999999999999999999999999
Q ss_pred HHHHHc-------CCCCceeecCChHHHHHcCCc
Q 027527 146 TFSEQT-------KFKGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 146 ~f~~~~-------~~pfpil~Dpd~~lyk~lGl~ 172 (222)
+|++++ +++|+++.|++.++.+.||+.
T Consensus 106 ~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~ 139 (220)
T 1zye_A 106 AWINTPRKNGGLGHMNIALLSDLTKQISRDYGVL 139 (220)
T ss_dssp HHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCE
T ss_pred HHHHHHHHhCCCcCCceEEEECCcHHHHHHhCCe
Confidence 999987 889999999999999999997
No 59
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.76 E-value=7.1e-18 Score=133.18 Aligned_cols=108 Identities=14% Similarity=0.110 Sum_probs=93.3
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH-HHHHH
Q 027527 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQART 146 (222)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~-~~i~~ 146 (222)
....|+.+|+|++.|.+|+.++|+++ ++ +++|++||++|||+|+++++.|+++++++.+.|+++++|+.++. +..++
T Consensus 8 ~~~~g~~~p~f~l~~~~G~~~~l~~~-~g-k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~ 85 (152)
T 2lrt_A 8 DKIKEASIIDIQLKDLKGNTRSLTDL-KG-KVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKT 85 (152)
T ss_dssp SSSCTTCSCCCCEEBTTSCEECTTTG-GG-SEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHH
T ss_pred hhccCCCCCCeEEEcCCCCEEeHHHh-CC-CEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHH
Confidence 35678999999999999999999997 34 46777778899999999999999999999999999999999866 56777
Q ss_pred HHHHcCCCCceeecCChH---HHHHcCCccccceee
Q 027527 147 FSEQTKFKGEVYADPNHS---SYEALSFVSGVLVTF 179 (222)
Q Consensus 147 f~~~~~~pfpil~Dpd~~---lyk~lGl~~~~~~~~ 179 (222)
|.+ +++|+++.|++.. +.+.||+...+...+
T Consensus 86 ~~~--~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~l 119 (152)
T 2lrt_A 86 SAD--NLPWVCVRDANGAYSSYISLYNVTNLPSVFL 119 (152)
T ss_dssp HHT--TCSSEEEECSSGGGCHHHHHHTCCSCSEEEE
T ss_pred HHh--CCCceEEECCCCcchHHHHHcCcccCceEEE
Confidence 765 4899999999997 999999987765544
No 60
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.75 E-value=3.8e-18 Score=131.40 Aligned_cols=111 Identities=8% Similarity=-0.002 Sum_probs=98.2
Q ss_pred CCccccCcCCCcEEecCCCCeEeCC--CccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHH-HhCCCEEEEEcCCC-HH
Q 027527 67 VSEDTKNLLDTVKVYDVNGNAIPIS--DLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVM-DASGVALVLIGPGS-VE 142 (222)
Q Consensus 67 ~~~~~g~~apdf~L~D~~G~~v~Ls--dl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l-~~~gv~lvaIs~~s-~~ 142 (222)
....+|+.+|+|++.|.+|+.++++ ++ ++ +.+|++|++.||++|+++++.|.++++++ .+.|+.+++|+.++ .+
T Consensus 3 ~~~~~g~~~p~~~l~~~~g~~~~l~~~~~-~g-k~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~ 80 (148)
T 3fkf_A 3 AKVTVGKSAPYFSLPNEKGEKLSRSAERF-RN-RYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDRE 80 (148)
T ss_dssp --CCTTSBCCCCCEEBTTSCEECTTSTTT-TT-SEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHH
T ss_pred ccccCCCcCCCeEeeCCCCCEEecccccc-CC-cEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHH
Confidence 3468899999999999999999999 87 34 56777778999999999999999999999 88899999999885 47
Q ss_pred HHHHHHHHcCCCCceeecC---ChHHHHHcCCccccceee
Q 027527 143 QARTFSEQTKFKGEVYADP---NHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 143 ~i~~f~~~~~~pfpil~Dp---d~~lyk~lGl~~~~~~~~ 179 (222)
..++|.++++++|+++.|+ +..+.+.||+...+...+
T Consensus 81 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~l 120 (148)
T 3fkf_A 81 AWETAIKKDTLSWDQVCDFTGLSSETAKQYAILTLPTNIL 120 (148)
T ss_dssp HHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHHcCCCceEEEccCCcchHHHHhcCCCCcCEEEE
Confidence 9999999999999999999 789999999987776554
No 61
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.75 E-value=1.9e-18 Score=135.48 Aligned_cols=107 Identities=18% Similarity=0.185 Sum_probs=97.1
Q ss_pred ccCcCCCcEEec-CCCCeEeCCCccCCCeEEEEEEcCCCChhHHHH-HHHHHHhHHHHHhCCCEEEEEcC-------CCH
Q 027527 71 TKNLLDTVKVYD-VNGNAIPISDLWKDRKAVVAFARHFGCVLCRKR-ADYLAAKKDVMDASGVALVLIGP-------GSV 141 (222)
Q Consensus 71 ~g~~apdf~L~D-~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~e-l~~L~~~~~~l~~~gv~lvaIs~-------~s~ 141 (222)
.|+++|+|++.| .+|+.++|+++ .++++|++||++||++|+.+ ++.|+++++++.+.|+.+++|+. ++.
T Consensus 5 ~g~~~p~~~~~~~~~g~~~~l~~~--~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~ 82 (160)
T 3lor_A 5 DNAPLLELDVQEWVNHEGLSNEDL--RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTP 82 (160)
T ss_dssp TTCCBCCCCEEEESSSCCCCHHHH--TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCH
T ss_pred CCCcCCCcccccccCCCccCHHHh--CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCH
Confidence 688999999999 89999999997 34678888899999999996 99999999999989999999997 688
Q ss_pred HHHHHHHHHcCCCCceeecCChH------HHHHcCCccccceee
Q 027527 142 EQARTFSEQTKFKGEVYADPNHS------SYEALSFVSGVLVTF 179 (222)
Q Consensus 142 ~~i~~f~~~~~~pfpil~Dpd~~------lyk~lGl~~~~~~~~ 179 (222)
+.+++|+++++++|+++.|++.. +.+.||+...+...+
T Consensus 83 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~l 126 (160)
T 3lor_A 83 EALKVFIDEFGIKFPVAVDMPREGQRIPSTMKKYRLEGTPSIIL 126 (160)
T ss_dssp HHHHHHHHHTTCCSCEEEECCCTTCSSCHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHHHcCCCCcEEECCccccchhhhHHHhcccCccceEEE
Confidence 99999999999999999999998 999999987765544
No 62
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.75 E-value=3.9e-18 Score=147.88 Aligned_cols=103 Identities=16% Similarity=0.130 Sum_probs=95.0
Q ss_pred ccccCcCCCcEEecCCCCeEeC-CCcc-CCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHH
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPI-SDLW-KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~L-sdl~-~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~ 146 (222)
..+|+.+|+|++.+.+| .++| +++. +++++||+|||+.|||+|..+++.|++++++|++.|++||+|+.|+.+..++
T Consensus 5 ~~iG~~aPdF~l~~~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~ 83 (249)
T 3a2v_A 5 PLIGERFPEMEVTTDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIK 83 (249)
T ss_dssp CCTTSBCCCEEEEETTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHH
T ss_pred CCCCCCCCCeEEEcCCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHH
Confidence 46899999999999999 7999 9975 6778899999999999999999999999999999999999999999988888
Q ss_pred HHHH------cCCCCceeecCChHHHHHcCCc
Q 027527 147 FSEQ------TKFKGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 147 f~~~------~~~pfpil~Dpd~~lyk~lGl~ 172 (222)
|.+. .+++||+++|+++++.+.||+.
T Consensus 84 w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~ 115 (249)
T 3a2v_A 84 WKEWIERHIGVRIPFPIIADPQGTVARRLGLL 115 (249)
T ss_dssp HHHHHHHHTCCCCCSCEEECTTSHHHHHHTCC
T ss_pred HHHHHHHhcCCCCceeEEECCchHHHHHhCCc
Confidence 8774 5899999999999999999996
No 63
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.75 E-value=9.8e-18 Score=128.38 Aligned_cols=110 Identities=15% Similarity=0.182 Sum_probs=94.7
Q ss_pred CCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC----CHH
Q 027527 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVE 142 (222)
Q Consensus 67 ~~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~----s~~ 142 (222)
....+|+.+|+|++.|.+|+.+++++ ++++ +|++|++.||++|+++++.|.++++++.+.++.++.|+.+ +.+
T Consensus 7 ~~~~~g~~~p~~~l~~~~g~~~~l~~--~gk~-~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~ 83 (145)
T 3erw_A 7 AEEKQPAVPAVFLMKTIEGEDISIPN--KGQK-TILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQ 83 (145)
T ss_dssp -----CCSCCEEEEECTTSCEEEESC--TTSE-EEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHH
T ss_pred ccccCCCcCCCceeecCCCCEEeHHH--CCCE-EEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHH
Confidence 34678999999999999999999999 4554 5556669999999999999999999998789999999885 778
Q ss_pred HHHHHHHHcCCCCceeecCChHHHHHcCCccccceee
Q 027527 143 QARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 143 ~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~~~~~~ 179 (222)
.+++|.++++++|+++.|++..+.+.||+...+...+
T Consensus 84 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~l 120 (145)
T 3erw_A 84 VVEDFIKANKLTFPIVLDSKGELMKEYHIITIPTSFL 120 (145)
T ss_dssp HHHHHHHHTTCCSCEEECSSSHHHHHTTCCEESEEEE
T ss_pred HHHHHHHHcCCceeEEEcCchhHHHhcCcCccCeEEE
Confidence 9999999999999999999999999999987776544
No 64
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.74 E-value=5.1e-18 Score=137.83 Aligned_cols=94 Identities=7% Similarity=0.099 Sum_probs=79.3
Q ss_pred CCCCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC-----
Q 027527 65 PSVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----- 139 (222)
Q Consensus 65 ~~~~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~----- 139 (222)
.-...++|+.+|+|++.|.+|+.++|+++ .++++|++||++|||+|+++++.|+++++++.+.|+++++|+.+
T Consensus 19 ~~~~~~~g~~~p~f~l~~~~G~~~~l~~~--~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~ 96 (181)
T 2p31_A 19 YFQSMQQEQDFYDFKAVNIRGKLVSLEKY--RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQ 96 (181)
T ss_dssp --------CCGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTC
T ss_pred ccCcCCcCCccCceEeecCCCCEecHHHc--CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCC
Confidence 44457899999999999999999999997 34578888899999999999999999999999999999999875
Q ss_pred ---CHHHHHHHHHH-cCCCCceeec
Q 027527 140 ---SVEQARTFSEQ-TKFKGEVYAD 160 (222)
Q Consensus 140 ---s~~~i~~f~~~-~~~pfpil~D 160 (222)
+.+.+++|+++ ++++||++.|
T Consensus 97 e~~~~~~~~~~~~~~~~~~~p~~~~ 121 (181)
T 2p31_A 97 EPDSNKEIESFARRTYSVSFPMFSK 121 (181)
T ss_dssp CCSCHHHHHHHHHHHHCCCSCBBCC
T ss_pred CCCCHHHHHHHHHhhcCCCceeEee
Confidence 57899999999 9999999964
No 65
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.74 E-value=3.7e-18 Score=138.18 Aligned_cols=101 Identities=8% Similarity=0.014 Sum_probs=86.7
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCC-ChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHH
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFG-CVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~-Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f 147 (222)
..+|+++|+|++.|.+|+.++|+++ +++ .+|++||++| |++|+.+++.|++++++ .++++|+|+.|+++.+++|
T Consensus 18 l~~G~~~P~f~l~~~~G~~v~l~~~-~gk-~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D~~~~~~~~ 92 (175)
T 1xvq_A 18 PAVGSPAPAFTLTGGDLGVISSDQF-RGK-SVLLNIFPSVDTPVCATSVRTFDERAAA---SGATVLCVSKDLPFAQKRF 92 (175)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGG-TTS-CEEEEECSCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESSCHHHHTTC
T ss_pred CCcCCcCCCeEEECCCCCEEeHHHc-CCC-EEEEEEEeCCCCchHHHHHHHHHHHHhh---cCCEEEEEECCCHHHHHHH
Confidence 5789999999999999999999997 454 5666777777 99999999999999988 7899999999999999999
Q ss_pred HHHcCC-CCceeecCChHHHHHcCCccc
Q 027527 148 SEQTKF-KGEVYADPNHSSYEALSFVSG 174 (222)
Q Consensus 148 ~~~~~~-pfpil~Dpd~~lyk~lGl~~~ 174 (222)
++++++ +|+++.|++..+++.||+...
T Consensus 93 ~~~~~~~~~~~l~D~~~~~~~~~gv~~~ 120 (175)
T 1xvq_A 93 CGAEGTENVMPASAFRDSFGEDYGVTIA 120 (175)
T ss_dssp C------CEEEEECTTSSHHHHTTCBBC
T ss_pred HHHcCCCCceEeeCCHHHHHHHhCCccc
Confidence 999999 899999999999999999654
No 66
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.74 E-value=5.4e-18 Score=134.89 Aligned_cols=102 Identities=12% Similarity=0.228 Sum_probs=91.6
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCh-hHHHHHHHHHHhHHHHHhCC--CEEEEEcCC----C
Q 027527 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCV-LCRKRADYLAAKKDVMDASG--VALVLIGPG----S 140 (222)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp-~C~~el~~L~~~~~~l~~~g--v~lvaIs~~----s 140 (222)
...+|+.+|+|+|.|.+|+.++|+++ ++ +++|++||++||+ +|+.+++.|+++++++.+.| +++|+|+.+ +
T Consensus 6 ~l~~g~~~p~f~l~~~~G~~~~l~~~-~g-k~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~ 83 (174)
T 1xzo_A 6 KDPLNYEVEPFTFQNQDGKNVSLESL-KG-EVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDK 83 (174)
T ss_dssp CSCCCEECCCCEEECTTSCEEETGGG-TT-CCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCC
T ss_pred cCccccccCCcEEEcCCCCEEehhhc-CC-CEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCC
Confidence 36789999999999999999999997 44 5678888899999 99999999999999999887 999999986 6
Q ss_pred HHHHHHHHHHcCCCC---ceeecCChHHHHHcCC
Q 027527 141 VEQARTFSEQTKFKG---EVYADPNHSSYEALSF 171 (222)
Q Consensus 141 ~~~i~~f~~~~~~pf---pil~Dpd~~lyk~lGl 171 (222)
++.+++|+++++++| +++.|++.++.+.|++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~ 117 (174)
T 1xzo_A 84 PKQLKKFAANYPLSFDNWDFLTGYSQSEIEEFAL 117 (174)
T ss_dssp HHHHHHHHTTSCCCGGGEEEEBCSCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCcceEEEeCCCHHHHHHHHH
Confidence 789999999999999 8999999988877753
No 67
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.74 E-value=1.9e-18 Score=137.68 Aligned_cols=102 Identities=12% Similarity=0.081 Sum_probs=93.2
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCC-ChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHH
Q 027527 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFG-CVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (222)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~-Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~ 146 (222)
...+|+++|+|++.|.+|+.++|+++ +++ .+|++||++| |++|+++++.|+++++++ .++++|+|+.|+++.+++
T Consensus 17 ~~~~G~~~p~f~l~~~~G~~~~l~~~-~gk-~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d~~~~~~~ 92 (167)
T 2jsy_A 17 EVKVGDQAPDFTVLTNSLEEKSLADM-KGK-VTIISVIPSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISADLPFAQAR 92 (167)
T ss_dssp CCCTTSCCCCCEEEBTTCCEEEHHHH-TTS-CEEEEECSCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECSSGGGTSC
T ss_pred ccCCCCcCCceEEECCCCCEeeHHHh-CCC-eEEEEEecCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECCCHHHHHH
Confidence 36789999999999999999999997 454 5677777887 999999999999999999 799999999999999999
Q ss_pred HHHHcCC-CCceeec-CChHHHHHcCCcc
Q 027527 147 FSEQTKF-KGEVYAD-PNHSSYEALSFVS 173 (222)
Q Consensus 147 f~~~~~~-pfpil~D-pd~~lyk~lGl~~ 173 (222)
|++++++ +|+++.| ++..+.+.||+..
T Consensus 93 ~~~~~~~~~~~~~~d~~~~~~~~~~~v~~ 121 (167)
T 2jsy_A 93 WCGANGIDKVETLSDHRDMSFGEAFGVYI 121 (167)
T ss_dssp CGGGSSCTTEEEEEGGGTCHHHHHTTCBB
T ss_pred HHHhcCCCCceEeeCCchhHHHHHhCCcc
Confidence 9999999 8999999 9999999999975
No 68
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.74 E-value=1.2e-17 Score=136.17 Aligned_cols=102 Identities=10% Similarity=0.092 Sum_probs=88.5
Q ss_pred CCCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC------
Q 027527 66 SVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG------ 139 (222)
Q Consensus 66 ~~~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~------ 139 (222)
....++|+.+|+|++.|.+|+.++|+++ ++ +++|++||++|||+|+++++.|+++++++++.|+++|+|+.+
T Consensus 20 ~~~~~~g~~~p~f~l~~~~G~~v~l~~~-~G-k~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~ 97 (185)
T 2gs3_A 20 FQSMRCARSMHEFSAKDIDGHMVNLDKY-RG-FVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQE 97 (185)
T ss_dssp SGGGGGCCCGGGCEEEBTTSCEEEGGGG-TT-SEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCC
T ss_pred hhhccCCCCcCCceeEcCCCCEeeHHHc-CC-CEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCC
Confidence 3446789999999999999999999997 34 578889999999999999999999999999999999999864
Q ss_pred --CHHHHHHHHHHcCCCCceee--cCCh----HHHHHc
Q 027527 140 --SVEQARTFSEQTKFKGEVYA--DPNH----SSYEAL 169 (222)
Q Consensus 140 --s~~~i~~f~~~~~~pfpil~--Dpd~----~lyk~l 169 (222)
+++.+++|+++++++||++. |.+. .+|+.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l 135 (185)
T 2gs3_A 98 PGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWM 135 (185)
T ss_dssp CSCHHHHHHHHHHTTCCSEEBCCCBSSSTTBCHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCCeeeeeeccCChhhhHHHHHH
Confidence 46889999999999999997 5554 366655
No 69
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.74 E-value=2.6e-17 Score=129.35 Aligned_cols=109 Identities=13% Similarity=0.132 Sum_probs=94.7
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCC-HHHHHH
Q 027527 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQART 146 (222)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s-~~~i~~ 146 (222)
...+|+++|+|++.|.+|+.++++++ ++ +.+|++|++.|||.|+++++.|+++++++.+.|+.+++|..++ .+.+++
T Consensus 7 ~~~~g~~~p~~~l~~~~g~~~~l~~~-~g-k~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~ 84 (165)
T 3or5_A 7 ADARPTPAPSFSGVTVDGKPFSSASL-KG-KAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKN 84 (165)
T ss_dssp CCCCCCBCCCCEEECTTSCEEEGGGG-TT-CEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHH
T ss_pred hhcCCCCCCCceeeCCCCCEechhHc-CC-CEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHH
Confidence 35789999999999999999999997 44 4667777799999999999999999999999999999999876 688999
Q ss_pred HHHHcCCCCceeecCChHHHHHc------CCccccceee
Q 027527 147 FSEQTKFKGEVYADPNHSSYEAL------SFVSGVLVTF 179 (222)
Q Consensus 147 f~~~~~~pfpil~Dpd~~lyk~l------Gl~~~~~~~~ 179 (222)
|.++++++|+++.|.+ .+.+.| |+...+...+
T Consensus 85 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~P~~~l 122 (165)
T 3or5_A 85 YMKTQGIIYPVMMATP-ELIRAFNGYIDGGITGIPTSFV 122 (165)
T ss_dssp HHHHHTCCSCEEECCH-HHHHHHHTTSTTCSCSSSEEEE
T ss_pred HHHHcCCCCceEecCH-HHHHHHhhhhccCCCCCCeEEE
Confidence 9999999999999987 888888 6655555433
No 70
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.74 E-value=1.3e-17 Score=134.71 Aligned_cols=104 Identities=18% Similarity=0.300 Sum_probs=93.7
Q ss_pred CCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH--HHH
Q 027527 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV--EQA 144 (222)
Q Consensus 67 ~~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~--~~i 144 (222)
....+|+.+|+|++.|.+|+.++|+++ ++ +.+|++||+.||++|+++++.|+++++++.+.++++++|+.+.. +.+
T Consensus 32 ~~~~~g~~~p~f~l~~~~G~~~~l~~~-~g-k~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~ 109 (186)
T 1jfu_A 32 TMASAPLKLPDLAFEDADGKPKKLSDF-RG-KTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKP 109 (186)
T ss_dssp EECCSCCBCCCCEEECTTSCEEEGGGG-TT-SEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHH
T ss_pred ccccCCCcCCCcEeEcCCCCEeeHHHc-CC-CEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHH
Confidence 345779999999999999999999997 34 56777888999999999999999999999888999999999854 788
Q ss_pred HHHHHHcCCC-CceeecCChHHHHHcCCc
Q 027527 145 RTFSEQTKFK-GEVYADPNHSSYEALSFV 172 (222)
Q Consensus 145 ~~f~~~~~~p-fpil~Dpd~~lyk~lGl~ 172 (222)
++|+++++++ |+++.|++..+++.||+.
T Consensus 110 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 110 KTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp HHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred HHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 9999999995 999999999999999985
No 71
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.73 E-value=9.5e-18 Score=143.64 Aligned_cols=99 Identities=5% Similarity=0.020 Sum_probs=90.3
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHH-----HHHHHHHHhHHHHHhCCCEEEEEcCCCHHH
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCR-----KRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~-----~el~~L~~~~~~l~~~gv~lvaIs~~s~~~ 143 (222)
..+|+++|+|+|.|.+|+.++|+++ +++++||+||+..|||+|. .|++.|++. + .|+.||+|+.|+++.
T Consensus 22 l~vG~~APdFtL~d~~G~~vsLsd~-~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~VvgIS~Ds~~~ 95 (224)
T 3keb_A 22 PRKGDYLPSFMLVDDQKHDAALESF-SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIVITVDSPSS 95 (224)
T ss_dssp CCTTCBCCCCEEEETTSCEEEGGGG-TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEEEESSCHHH
T ss_pred CCCCCCCCCeEEECCCCCEEeHHHh-CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEEEECCCHHH
Confidence 5789999999999999999999995 5777777777777799999 999999988 4 799999999999999
Q ss_pred HHHHHHHcCC-CCceeecC-ChHHHHHcCCcc
Q 027527 144 ARTFSEQTKF-KGEVYADP-NHSSYEALSFVS 173 (222)
Q Consensus 144 i~~f~~~~~~-pfpil~Dp-d~~lyk~lGl~~ 173 (222)
.++|++++++ +|++++|+ ++++.++||+..
T Consensus 96 ~~~f~~~~gl~~fplLsD~~~~~vak~yGv~~ 127 (224)
T 3keb_A 96 LARARHEHGLPNIALLSTLRGRDFHKRYGVLI 127 (224)
T ss_dssp HHHHHHHHCCTTCEEEESTTCTTHHHHTTCBC
T ss_pred HHHHHHHcCCCCceEEEcCCchHHHHHhCCcc
Confidence 9999999999 69999999 799999999964
No 72
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.73 E-value=3.2e-17 Score=132.77 Aligned_cols=109 Identities=15% Similarity=0.074 Sum_probs=94.5
Q ss_pred CCCCccccCcCCCcEEecCCC--CeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEc-CCCH
Q 027527 65 PSVSEDTKNLLDTVKVYDVNG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG-PGSV 141 (222)
Q Consensus 65 ~~~~~~~g~~apdf~L~D~~G--~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs-~~s~ 141 (222)
+.+...+|+++|+|++.|.+| +.++++++ ++ +.+|++||+.|||+|+++++.|++++++ |+.+|+|+ .++.
T Consensus 26 ~~~~~~~G~~~P~f~l~~~~g~~~~~~l~~~-~g-k~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d~~ 99 (176)
T 3kh7_A 26 ELPSALIGKPFPAFDLPSVQDPARRLTEADL-KG-KPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGINYKDDN 99 (176)
T ss_dssp GSTTTTTTSBCCCCEEEBSSCTTSEEEGGGG-CS-SCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEEESCCH
T ss_pred cccccccCCcCCCcEecccCCCCceecHHHh-CC-CEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCCCH
Confidence 344578899999999999999 89999997 34 4577777899999999999999998876 89999999 4677
Q ss_pred HHHHHHHHHcCCCCc-eeecCChHHHHHcCCccccceee
Q 027527 142 EQARTFSEQTKFKGE-VYADPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 142 ~~i~~f~~~~~~pfp-il~Dpd~~lyk~lGl~~~~~~~~ 179 (222)
+..++|.++++++|+ ++.|++..+.+.||+...+...+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~l 138 (176)
T 3kh7_A 100 AAAIKWLNELHNPYLLSISDADGTLGLDLGVYGAPETYL 138 (176)
T ss_dssp HHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSSCEEEE
T ss_pred HHHHHHHHHcCCCCceEEECCcchHHHHcCCCCCCeEEE
Confidence 899999999999998 69999999999999987764443
No 73
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.73 E-value=1.4e-17 Score=131.60 Aligned_cols=94 Identities=14% Similarity=0.225 Sum_probs=82.5
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC--------C
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------S 140 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~--------s 140 (222)
.++|+.+|+|++.|.+|+.++|+++ ++ +++|++||++|||+|+.+++.|+++++++.+.|+++|+|+.+ +
T Consensus 5 ~~~g~~~p~f~l~~~~G~~~~l~~~-~g-k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~ 82 (169)
T 2v1m_A 5 HKSWNSIYEFTVKDINGVDVSLEKY-RG-HVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWA 82 (169)
T ss_dssp --CCCSGGGCEEEBTTSCEEEGGGG-TT-SEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSC
T ss_pred ccCCcccccceeecCCCCCccHHHc-CC-CEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCC
Confidence 5789999999999999999999997 34 577888889999999999999999999999999999999874 4
Q ss_pred HHHHHHH-HHHcCCCCceee--cCChH
Q 027527 141 VEQARTF-SEQTKFKGEVYA--DPNHS 164 (222)
Q Consensus 141 ~~~i~~f-~~~~~~pfpil~--Dpd~~ 164 (222)
.+.+++| .++++++||++. |.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (169)
T 2v1m_A 83 EAEIKKFVTEKYGVQFDMFSKIKVNGS 109 (169)
T ss_dssp HHHHHHHHHHHHCCCSEEBCCCCCSST
T ss_pred HHHHHHHHHHhcCCCCceEEEEeecCc
Confidence 6899999 599999999996 77654
No 74
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.72 E-value=1.7e-17 Score=131.35 Aligned_cols=94 Identities=14% Similarity=0.173 Sum_probs=81.2
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC--------C
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------S 140 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~--------s 140 (222)
.++|+.+|+|++.|.+|+.++|+++ ++ +++|++||++||++|+.+++.|+++++++.+.|+++|+|+.+ +
T Consensus 6 ~~~g~~~p~f~l~~~~g~~~~l~~~-~g-k~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~ 83 (170)
T 2p5q_A 6 SKNPESVHDFTVKDAKENDVDLSIF-KG-KVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGT 83 (170)
T ss_dssp ----CCGGGCEEEBTTSCEEEGGGG-TT-SEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSC
T ss_pred CCCCccccceEEEcCCCCEecHHHh-CC-CEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCC
Confidence 4679999999999999999999997 34 567888889999999999999999999999999999999974 6
Q ss_pred HHHHHHHHH-HcCCCCcee--ecCChH
Q 027527 141 VEQARTFSE-QTKFKGEVY--ADPNHS 164 (222)
Q Consensus 141 ~~~i~~f~~-~~~~pfpil--~Dpd~~ 164 (222)
.+.+++|++ +++++|+++ .|++..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 84 NDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp HHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred HHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 789999999 789999999 687754
No 75
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.72 E-value=1.4e-17 Score=136.15 Aligned_cols=98 Identities=10% Similarity=0.124 Sum_probs=83.3
Q ss_pred CCCCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC-----
Q 027527 65 PSVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----- 139 (222)
Q Consensus 65 ~~~~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~----- 139 (222)
..+....++.+|+|++.|.+|+.++|+++ ++ +++|++||++|||+|+++++.|+++++++.+.|+++|+|+.+
T Consensus 18 ~~s~~~~~~~~p~f~l~~~~G~~~~l~~~-~G-k~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~ 95 (190)
T 2vup_A 18 GGSHMSAASSIFDFEVLDADHKPYNLVQH-KG-SPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQ 95 (190)
T ss_dssp ------CCCSGGGSCCBBTTSSBCCGGGG-TT-SCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTC
T ss_pred ccccCCCCCcccCeEEEcCCCCEEEHHHc-CC-CEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCC
Confidence 44567889999999999999999999997 44 567778899999999999999999999999999999999987
Q ss_pred ---CHHHHHHHH-HHcCCCCceee--cCChH
Q 027527 140 ---SVEQARTFS-EQTKFKGEVYA--DPNHS 164 (222)
Q Consensus 140 ---s~~~i~~f~-~~~~~pfpil~--Dpd~~ 164 (222)
+++.+++|+ ++++++|+++. |++..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 96 EPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp CCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 678999999 89999999997 66654
No 76
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.71 E-value=2.5e-17 Score=128.57 Aligned_cols=106 Identities=13% Similarity=0.135 Sum_probs=95.5
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcC---CCHHHH
Q 027527 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP---GSVEQA 144 (222)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~---~s~~~i 144 (222)
...+|+.+|+|++.|.+|+.++++++ + +.+|++|++.||+.|+++++.|.++++++ ++++++|+. ++.+.+
T Consensus 4 ~l~~g~~~p~f~l~~~~g~~~~l~~~-~--k~vll~f~~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~~~~~~~~ 77 (154)
T 3ia1_A 4 AVKPGEPLPDFLLLDPKGQPVTPATV-S--KPAVIVFWASWCTVCKAEFPGLHRVAEET---GVPFYVISREPRDTREVV 77 (154)
T ss_dssp CCCSBEECCCCCEECTTSCEECTTTS-C--SSEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCEEEEECCTTCCHHHH
T ss_pred cCCCCCcCCceEEECCCCCEechHHc-C--CeEEEEEEcccChhHHHHHHHHHHHHHHc---CCeEEEEeCCCcccHHHH
Confidence 46789999999999999999999997 3 55677777999999999999999999998 899999999 788999
Q ss_pred HHHHHHcCCCCceeec---CChHHHHHcCCccccceee
Q 027527 145 RTFSEQTKFKGEVYAD---PNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 145 ~~f~~~~~~pfpil~D---pd~~lyk~lGl~~~~~~~~ 179 (222)
++|.++++++|+++.| .+..+.+.||+...+...+
T Consensus 78 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~l 115 (154)
T 3ia1_A 78 LEYMKTYPRFIPLLASDRDRPHEVAARFKVLGQPWTFV 115 (154)
T ss_dssp HHHHTTCTTEEECBCCSSCCHHHHHTTSSBCSSCEEEE
T ss_pred HHHHHHcCCCcccccccccchHHHHHHhCCCcccEEEE
Confidence 9999999999999998 8899999999987776444
No 77
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.71 E-value=3.1e-17 Score=146.69 Aligned_cols=95 Identities=18% Similarity=0.235 Sum_probs=86.6
Q ss_pred CcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC
Q 027527 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK 152 (222)
Q Consensus 73 ~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~ 152 (222)
.++|+|+|.|.+|++++|+|+ +++++||.|++..|||.|..|+++|++. ...|++|++|+.|+++..++|+++++
T Consensus 2 ak~p~F~l~~~~G~~~~Lsd~-~Gk~vvl~F~p~~~tp~C~~e~~~~~~~----~~~~~~v~gis~D~~~~~~~f~~~~~ 76 (322)
T 4eo3_A 2 ARVKHFELLTDEGKTFTHVDL-YGKYTILFFFPKAGTSGSTREAVEFSRE----NFEKAQVVGISRDSVEALKRFKEKND 76 (322)
T ss_dssp CBCCCCEEEETTSCEEEGGGT-TTSEEEEEECSSTTSHHHHHHHHHHHHS----CCTTEEEEEEESCCHHHHHHHHHHHT
T ss_pred CCCCCcEEECCCcCEEeHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHH----hhCCCEEEEEeCCCHHHHHHHHHhhC
Confidence 589999999999999999997 5778888888899999999999988753 23589999999999999999999999
Q ss_pred CCCceeecCChHHHHHcCCc
Q 027527 153 FKGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 153 ~pfpil~Dpd~~lyk~lGl~ 172 (222)
++||+++|+++++.++||+.
T Consensus 77 l~fp~l~D~~~~v~~~ygv~ 96 (322)
T 4eo3_A 77 LKVTLLSDPEGILHEFFNVL 96 (322)
T ss_dssp CCSEEEECTTCHHHHHTTCE
T ss_pred CceEEEEcCchHHHHhcCCC
Confidence 99999999999999999984
No 78
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.71 E-value=3e-17 Score=126.09 Aligned_cols=107 Identities=10% Similarity=0.155 Sum_probs=95.0
Q ss_pred cccCcCCCcEE--ecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC------CH
Q 027527 70 DTKNLLDTVKV--YDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG------SV 141 (222)
Q Consensus 70 ~~g~~apdf~L--~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~------s~ 141 (222)
.+|+.+|+|++ .|.+|+.++++++ ++ +.+|++|++.||+.|+++++.|.++++++.+. +.+++|..+ +.
T Consensus 2 ~~g~~~P~f~~~~~~~~g~~~~~~~~-~g-k~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~~~ 78 (148)
T 2b5x_A 2 KLRQPMPELTGEKAWLNGEVTREQLI-GE-KPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDDLDP 78 (148)
T ss_dssp CTTCBCCCCCCCSEEESCCCCHHHHT-TT-SCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTTSSH
T ss_pred CCCCCCCCCccccccccCcccchhhc-CC-CEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCccccCH
Confidence 57999999999 7899999999986 44 45666777999999999999999999999776 999999976 67
Q ss_pred HHHHHHHHHcCCCCceeecCChHHHHHcCCccccceee
Q 027527 142 EQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 142 ~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~~~~~~ 179 (222)
+.+++|.++++++|+++.|++..+.+.||+...+...+
T Consensus 79 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~l 116 (148)
T 2b5x_A 79 GKIKETAAEHDITQPIFVDSDHALTDAFENEYVPAYYV 116 (148)
T ss_dssp HHHHHHHHHTTCCSCEEECSSCHHHHHTCCCCSSEEEE
T ss_pred HHHHHHHHHcCCCcceEECCchhHHHHhCCCCCCEEEE
Confidence 89999999999999999999999999999987776555
No 79
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.71 E-value=2.2e-17 Score=130.69 Aligned_cols=106 Identities=16% Similarity=0.169 Sum_probs=95.8
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC---------
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------- 139 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~--------- 139 (222)
.++|+.+|+|++.|.+|+.++++++ ++ +++|++|++.||++|+++++.|.++++++. ++.+++|+.+
T Consensus 11 ~~~g~~~p~~~l~~~~g~~~~l~~~-~g-k~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~ 86 (165)
T 3ha9_A 11 EEVLEREASFSLTTIDGEVISLNNV-GG-DVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALG 86 (165)
T ss_dssp HHHHHHHHCCCEEBTTSCEECGGGC-CS-SEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHT
T ss_pred ccccCcCCCCEeecCCCCEeeHHHh-CC-CEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccc
Confidence 5789999999999999999999997 34 567777779999999999999999999987 9999999986
Q ss_pred ----------CHHHHHHHHHHcCC-CCceeecCChHHHHHcCCccccceee
Q 027527 140 ----------SVEQARTFSEQTKF-KGEVYADPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 140 ----------s~~~i~~f~~~~~~-pfpil~Dpd~~lyk~lGl~~~~~~~~ 179 (222)
+.+.+++|.+++++ +|+++.| +..+.+.||+...+...+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~v~~~P~~~l 136 (165)
T 3ha9_A 87 LNKPGYPPPDTPEMFRKFIANYGDPSWIMVMD-DGSLVEKFNVRSIDYIVI 136 (165)
T ss_dssp CCSTTSCCCCCHHHHHHHHHHHSCTTSEEEEC-CSHHHHHTTCCSSSEEEE
T ss_pred cccccCCCCCCHHHHHHHHHHcCCCCeeEEeC-hHHHHHHhCCCCceEEEE
Confidence 77899999999999 8999999 999999999987776555
No 80
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.71 E-value=9.6e-17 Score=121.80 Aligned_cols=103 Identities=14% Similarity=0.150 Sum_probs=91.3
Q ss_pred CcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCC-HHHHHHHHHHc
Q 027527 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQT 151 (222)
Q Consensus 73 ~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s-~~~i~~f~~~~ 151 (222)
..+|+|++.|.+|+.+++.++ +++ .+|++|++.||++|+++++.|+++++++. ++.+++|+.++ .+.+++|.+++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~-~~k-~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~ 77 (136)
T 1lu4_A 2 DERLQFTATTLSGAPFDGASL-QGK-PAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVSKY 77 (136)
T ss_dssp GGGGCCEEEBTTSCEEEGGGG-TTS-CEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHH
T ss_pred CCCCCeEeecCCCCeecHHHh-CCC-EEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHHHc
Confidence 468999999999999999997 454 45666669999999999999999999986 99999999976 78999999999
Q ss_pred CCCCceeecCChHHHHHcCCccccceee
Q 027527 152 KFKGEVYADPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 152 ~~pfpil~Dpd~~lyk~lGl~~~~~~~~ 179 (222)
+++|+++.|++..+.+.||+...+...+
T Consensus 78 ~~~~~~~~d~~~~~~~~~~i~~~P~~~l 105 (136)
T 1lu4_A 78 NLNFTNLNDADGVIWARYNVPWQPAFVF 105 (136)
T ss_dssp TCCSEEEECTTSHHHHHTTCCSSSEEEE
T ss_pred CCCceEEECCchhHHHhcCCCCCCEEEE
Confidence 9999999999999999999977766544
No 81
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.70 E-value=2.5e-17 Score=130.60 Aligned_cols=101 Identities=11% Similarity=0.111 Sum_probs=90.6
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChh-HHHHHHHHHHhHHHHHhC---CCEEEEEcCC----C
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDAS---GVALVLIGPG----S 140 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~-C~~el~~L~~~~~~l~~~---gv~lvaIs~~----s 140 (222)
..+|+.+|+|++.|.+| .++|+++ .++++|++||++||++ |+++++.|+++++++.+. ++++|+|+.+ +
T Consensus 10 ~~~G~~~p~f~l~~~~g-~~~l~~~--~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~ 86 (172)
T 2k6v_A 10 RLLNPKPVDFALEGPQG-PVRLSQF--QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDP 86 (172)
T ss_dssp EEEEEEECCCEEECSSS-EEEGGGS--TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCC
T ss_pred cccCCCCCCeEEEcCCC-CCcHHHh--CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCC
Confidence 45788999999999999 9999997 3457888999999996 999999999999999775 7999999965 6
Q ss_pred HHHHHHHHHHcCCCCceeecCC---hHHHHHcCCc
Q 027527 141 VEQARTFSEQTKFKGEVYADPN---HSSYEALSFV 172 (222)
Q Consensus 141 ~~~i~~f~~~~~~pfpil~Dpd---~~lyk~lGl~ 172 (222)
++.+++|+++++.+|+++.|++ .++.+.||+.
T Consensus 87 ~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~gv~ 121 (172)
T 2k6v_A 87 PEVADRYAKAFHPSFLGLSGSPEAVREAAQTFGVF 121 (172)
T ss_dssp HHHHHHHHHHHCTTEEEECCCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhCCCcEEEeCCHHHHHHHHHhcCeE
Confidence 7899999999999999999998 6889999974
No 82
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.70 E-value=3.2e-17 Score=137.36 Aligned_cols=91 Identities=5% Similarity=-0.018 Sum_probs=80.5
Q ss_pred cccCcCCCcEEecCC-CCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC--------C
Q 027527 70 DTKNLLDTVKVYDVN-GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------S 140 (222)
Q Consensus 70 ~~g~~apdf~L~D~~-G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~--------s 140 (222)
..++.+|+|++.|.+ |+.++|+++ .+++||++||++|||+|+++++.|+++++++.+.|++||+|+.+ +
T Consensus 21 ~~~~~~p~f~l~~~~~G~~v~l~~~--~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~ 98 (208)
T 2f8a_A 21 QSMQSVYAFSARPLAGGEPVSLGSL--RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAK 98 (208)
T ss_dssp -CCCCGGGCEECBTTCSSCEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSC
T ss_pred hhcCccCceEeeeCCCCCCccHHHc--CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCC
Confidence 446789999999999 999999997 34578999999999999999999999999999999999999875 5
Q ss_pred HHHHHHHHH------HcCCCCceeecCC
Q 027527 141 VEQARTFSE------QTKFKGEVYADPN 162 (222)
Q Consensus 141 ~~~i~~f~~------~~~~pfpil~Dpd 162 (222)
.+.+++|++ +++++||++.|.+
T Consensus 99 ~~~i~~f~~~~~~~~~~~~~fp~l~d~d 126 (208)
T 2f8a_A 99 NEEILNSLKYVRPGGGFEPNFMLFEKCE 126 (208)
T ss_dssp HHHHHHHHHHTSSCTTCCCSSEEBCCCC
T ss_pred HHHHHHHHHhcccccccccceEEEEEee
Confidence 689999998 8999999997643
No 83
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.70 E-value=3.2e-17 Score=138.85 Aligned_cols=88 Identities=10% Similarity=0.068 Sum_probs=79.0
Q ss_pred cCcCCCcEEecCC-CCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcC--------CCHH
Q 027527 72 KNLLDTVKVYDVN-GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------GSVE 142 (222)
Q Consensus 72 g~~apdf~L~D~~-G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~--------~s~~ 142 (222)
...+|+|++.|.+ |+.++|+++ .+++||++||++|||+|+ |++.|+++++++.+.|++||+|++ ++.+
T Consensus 32 ~~~~pdF~l~d~~~G~~v~Lsd~--~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~~ 108 (215)
T 2i3y_A 32 KGTIYDYEAIALNKNEYVSFKQY--VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNK 108 (215)
T ss_dssp CCCGGGCEEEBSSSSCEEEGGGG--TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHH
T ss_pred cCCcCCcEeeeCCCCCEEcHHHh--CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCCHH
Confidence 5679999999999 999999997 345788889999999999 999999999999999999999985 3568
Q ss_pred HHHHHHH------HcCCCCceeecCC
Q 027527 143 QARTFSE------QTKFKGEVYADPN 162 (222)
Q Consensus 143 ~i~~f~~------~~~~pfpil~Dpd 162 (222)
.+++|++ +++++||++.|.+
T Consensus 109 ~i~~f~~~~~~~~~~~~~fpll~d~d 134 (215)
T 2i3y_A 109 EILPGLKYVRPGGGFVPSFQLFEKGD 134 (215)
T ss_dssp HHHHHHHHTSSCTTCCCSSEEBCCCC
T ss_pred HHHHHHHhccchhccCccceeEeeec
Confidence 9999999 8999999998754
No 84
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.70 E-value=2e-16 Score=119.03 Aligned_cols=103 Identities=17% Similarity=0.194 Sum_probs=91.0
Q ss_pred cCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEE------cCCCHHHHHHH
Q 027527 74 LLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI------GPGSVEQARTF 147 (222)
Q Consensus 74 ~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaI------s~~s~~~i~~f 147 (222)
++|+|++.|.+|+.++++++ ++ +.+|++|++.||+.|+++++.|++++++ ...++.++.| ..++.+.+++|
T Consensus 1 ~~p~f~l~~~~g~~~~l~~~-~g-k~~lv~f~~~~C~~C~~~~~~l~~~~~~-~~~~~~~v~i~~~~~~~~~~~~~~~~~ 77 (138)
T 4evm_A 1 EVADFELMGVDGKTYRLSDY-KG-KKVYLKFWASWCSICLASLPDTDEIAKE-AGDDYVVLTVVSPGHKGEQSEADFKNW 77 (138)
T ss_dssp CCCCCEEEBTTSCEEEGGGG-TT-SEEEEEECCTTCHHHHHHHHHHHHHHHT-CTTTEEEEEEECTTSTTCCCHHHHHHH
T ss_pred CCCcceeECCCCCEEEHHHh-CC-CEEEEEEEcCcCHHHHHHHHHHHHHHHH-hCCCcEEEEEEcCCCCchhhHHHHHHH
Confidence 58999999999999999997 34 4677788899999999999999999998 4568999999 56677999999
Q ss_pred HHHcCC-CCceeecCChHHHHHcCCccccceee
Q 027527 148 SEQTKF-KGEVYADPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 148 ~~~~~~-pfpil~Dpd~~lyk~lGl~~~~~~~~ 179 (222)
.+++++ +|+++.|++..+.+.||+...+...+
T Consensus 78 ~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~l 110 (138)
T 4evm_A 78 YKGLDYKNLPVLVDPSGKLLETYGVRSYPTQAF 110 (138)
T ss_dssp HTTCCCTTCCEEECTTCHHHHHTTCCSSSEEEE
T ss_pred HhhcCCCCeeEEECcchHHHHHcCcccCCeEEE
Confidence 999999 89999999999999999987776555
No 85
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.69 E-value=2.1e-16 Score=119.44 Aligned_cols=104 Identities=13% Similarity=0.115 Sum_probs=91.8
Q ss_pred cCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCC-HHHHHHHHHH
Q 027527 72 KNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQ 150 (222)
Q Consensus 72 g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s-~~~i~~f~~~ 150 (222)
+..+|+|++.|.+|+.+++.++ ++++ +|++|++.||+.|+++++.|.++++++. ++.++.|..++ .+.+++|.++
T Consensus 2 ~~~~p~~~~~~~~g~~~~l~~~-~~k~-~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~ 77 (136)
T 1zzo_A 2 VPAQLQFSAKTLDGHDFHGESL-LGKP-AVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFVNK 77 (136)
T ss_dssp CCGGGCCEEEBTTSCEEEGGGG-TTSC-EEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHH
T ss_pred CCCCCCcccccCCCCEeeHHHh-CCCe-EEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHH
Confidence 5679999999999999999997 4554 5666669999999999999999999886 89999999875 6899999999
Q ss_pred cCC-CCceeecCChHHHHHcCCccccceee
Q 027527 151 TKF-KGEVYADPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 151 ~~~-pfpil~Dpd~~lyk~lGl~~~~~~~~ 179 (222)
+++ +|+++.|++..+.+.||+...+...+
T Consensus 78 ~~~~~~~~~~d~~~~~~~~~~i~~~P~~~~ 107 (136)
T 1zzo_A 78 YPVKTFTQLADTDGSVWANFGVTQQPAYAF 107 (136)
T ss_dssp TTCTTSEEEECTTCHHHHHTTCCSSSEEEE
T ss_pred cCCCceEEEEcCCcHHHHHcCCCCCceEEE
Confidence 999 89999999999999999987765544
No 86
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.69 E-value=1.2e-16 Score=124.22 Aligned_cols=109 Identities=15% Similarity=0.179 Sum_probs=96.5
Q ss_pred ccccCcCC-CcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH-HHHHH
Q 027527 69 EDTKNLLD-TVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQART 146 (222)
Q Consensus 69 ~~~g~~ap-df~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~-~~i~~ 146 (222)
..+|+.+| +|++.|.+|+.++++++ ++ +.+|++|++.||+.|+++++.|+++++++.+.++.+++|+.++. +.+++
T Consensus 3 l~~G~~~p~~f~l~~~~g~~~~l~~~-~g-k~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~ 80 (152)
T 2lja_A 3 LRSGNPSAASFSYPDINGKTVSLADL-KG-KYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWEN 80 (152)
T ss_dssp TTTTCCCSSSCEEEETTTEEEESTTT-TT-SEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHH
T ss_pred cccCCCCCcccEeecCCCCEeeHHHc-CC-CEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHH
Confidence 56899999 99999999999999997 34 56677788999999999999999999999888999999998864 68999
Q ss_pred HHHHcCCCC-ceeecCChHHHHHcCCccccceee
Q 027527 147 FSEQTKFKG-EVYADPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 147 f~~~~~~pf-pil~Dpd~~lyk~lGl~~~~~~~~ 179 (222)
|.++.++++ +++.|++..+.+.||+...+...+
T Consensus 81 ~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~l 114 (152)
T 2lja_A 81 MVTKDQLKGIQLHMGTDRTFMDAYLINGIPRFIL 114 (152)
T ss_dssp HHHHHTCCSEEEECSSCTHHHHHTTCCSSCCEEE
T ss_pred HHHhcCCCCceeecCcchhHHHHcCcCCCCEEEE
Confidence 999999996 688999999999999987766544
No 87
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.69 E-value=1.1e-16 Score=125.81 Aligned_cols=100 Identities=11% Similarity=0.083 Sum_probs=88.3
Q ss_pred cCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChh-HHHHHHHHHHhHHHHHh----CCCEEEEEcCCC----HHHH
Q 027527 74 LLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDA----SGVALVLIGPGS----VEQA 144 (222)
Q Consensus 74 ~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~-C~~el~~L~~~~~~l~~----~gv~lvaIs~~s----~~~i 144 (222)
.+|+|++.|.+|+.++|+++ + ++++|++||++|||+ |+.+++.|+++++++++ .++++|+|+.|. ++.+
T Consensus 2 ~ap~f~l~~~~G~~~~l~~~-~-gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~ 79 (164)
T 2ggt_A 2 LGGPFSLTTHTGERKTDKDY-L-GQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAI 79 (164)
T ss_dssp CCCCCEEEETTSCEEEGGGG-T-TCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHH
T ss_pred CCCCeEEEeCCCCEEeHHHc-C-CCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHH
Confidence 57999999999999999997 3 457788889999997 99999999999999987 499999999874 7899
Q ss_pred HHHHHHcCCCCcee---ecCChHHHHHcCCcccc
Q 027527 145 RTFSEQTKFKGEVY---ADPNHSSYEALSFVSGV 175 (222)
Q Consensus 145 ~~f~~~~~~pfpil---~Dpd~~lyk~lGl~~~~ 175 (222)
++|+++++++|+++ .|+...+.+.||+...+
T Consensus 80 ~~~~~~~~~~~~~l~~~~d~~~~~~~~~~v~~~p 113 (164)
T 2ggt_A 80 ANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSP 113 (164)
T ss_dssp HHHHHTTCSSCEEEECCHHHHHHHHHTTTCCEEE
T ss_pred HHHHHHcCCCeEEEeCCHHHHHHHHHhcCeEEEe
Confidence 99999999999988 46677899999996554
No 88
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.68 E-value=6.3e-17 Score=135.97 Aligned_cols=88 Identities=10% Similarity=0.021 Sum_probs=78.1
Q ss_pred cCcCCCcEEecCC-CCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcC--------CCHH
Q 027527 72 KNLLDTVKVYDVN-GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------GSVE 142 (222)
Q Consensus 72 g~~apdf~L~D~~-G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~--------~s~~ 142 (222)
.+.+|+|++.|.+ |+.++|+++ .+++||++||++|||+| .|++.|+++++++.+.|++||+|+. ++.+
T Consensus 14 ~~~~pdF~l~d~~~G~~v~Ls~~--kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~ 90 (207)
T 2r37_A 14 SGTIYEYGALTIDGEEYIPFKQY--AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENS 90 (207)
T ss_dssp -CCGGGCEEEBTTSSCEEEGGGG--TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHH
T ss_pred cCccCCeEeeeCCCCCEEcHHHh--CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHH
Confidence 4568999999999 999999997 34578889999999999 7999999999999999999999984 3568
Q ss_pred HHHHHHH------HcCCCCceeecCC
Q 027527 143 QARTFSE------QTKFKGEVYADPN 162 (222)
Q Consensus 143 ~i~~f~~------~~~~pfpil~Dpd 162 (222)
.+++|++ +++++||++.|.+
T Consensus 91 ~i~~f~~~~~~~~~~~~~fp~l~d~d 116 (207)
T 2r37_A 91 EILPTLKYVRPGGGFVPNFQLFEKGD 116 (207)
T ss_dssp HHHHHHHHTSSCTTCCCSSEEBCCCC
T ss_pred HHHHHHHhcchhhccCccceeeeEec
Confidence 9999999 9999999998754
No 89
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.51 E-value=2.5e-18 Score=135.43 Aligned_cols=102 Identities=17% Similarity=0.229 Sum_probs=92.4
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHH-hHHHHH-hCCCEEEEEcCCCH-HHHH
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAA-KKDVMD-ASGVALVLIGPGSV-EQAR 145 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~-~~~~l~-~~gv~lvaIs~~s~-~~i~ 145 (222)
.++|+.+|+|++.|.+|+.++++++ ++ +.+|++|++.|||+|+++++.|.+ +++++. +.++.+++|+.++. +.++
T Consensus 7 l~~g~~~p~f~l~~~~g~~~~l~~~-~g-k~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~ 84 (159)
T 2ls5_A 7 VRIGEMAPDFTITLTDGKQVTLSSL-RG-KVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVL 84 (159)
Confidence 5789999999999999999999997 34 567778889999999999999998 888887 78999999999865 6789
Q ss_pred HHHHHcCCCCceeecCChHHHHHcCCc
Q 027527 146 TFSEQTKFKGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 146 ~f~~~~~~pfpil~Dpd~~lyk~lGl~ 172 (222)
+|.++++++|+++.|++..+.+.||+.
T Consensus 85 ~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 85 AFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 999999999999999999999999964
No 90
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.68 E-value=1.6e-16 Score=124.14 Aligned_cols=103 Identities=12% Similarity=0.107 Sum_probs=85.7
Q ss_pred cCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCC
Q 027527 74 LLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (222)
Q Consensus 74 ~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~ 153 (222)
++|+|.+. .+|+.++|+++ .++++|++|++.|||+|+++++.|+++++++++.++.+++|+.++.+.+++|++++++
T Consensus 4 pa~~~~~~-~~G~~~~l~~~--~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~ 80 (151)
T 3raz_A 4 SADELAGW-KDNTPQSLQSL--KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPV 80 (151)
T ss_dssp ---CEEET-TTCCEECGGGC--CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCC
T ss_pred Ccchhhcc-cCCCEecHHHh--CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCC
Confidence 34455543 79999999997 3457788888999999999999999999999889999999999999999999999999
Q ss_pred CCceeecCC---hHHHHHcC--Cccccceee
Q 027527 154 KGEVYADPN---HSSYEALS--FVSGVLVTF 179 (222)
Q Consensus 154 pfpil~Dpd---~~lyk~lG--l~~~~~~~~ 179 (222)
+|+++.|.+ ..+++.|| +...+...+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l 111 (151)
T 3raz_A 81 SYPIWRYTGANSRNFMKTYGNTVGVLPFTVV 111 (151)
T ss_dssp SSCEEEECCSCHHHHHHTTTCCSCCSSEEEE
T ss_pred CCceEecCccchHHHHHHhCCccCCCCEEEE
Confidence 999998864 66889999 655554433
No 91
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.67 E-value=1.3e-16 Score=123.53 Aligned_cols=108 Identities=13% Similarity=0.053 Sum_probs=92.8
Q ss_pred ccCcCCC-cEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHh-CCCEEEEEcCC-CHHHHHHH
Q 027527 71 TKNLLDT-VKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPG-SVEQARTF 147 (222)
Q Consensus 71 ~g~~apd-f~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~-~gv~lvaIs~~-s~~~i~~f 147 (222)
.++.+|+ |++.|.+|+.++++++ ++ +.+|++|++.||++|+++++.|+++++++.+ .++.+++|+.+ +.+.+++|
T Consensus 3 ~~~~~P~~f~l~~~~g~~~~l~~~-~g-k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~ 80 (144)
T 1i5g_A 3 LKKFFPYSTNVLKGAAADIALPSL-AG-KTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDY 80 (144)
T ss_dssp TTTSCSSCSEEEETTEEEEEGGGG-TT-SEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHH
T ss_pred hhhhCCCceEEEcCCCCEecHHHc-CC-CEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHH
Confidence 5788999 9999999999999997 34 5678888899999999999999999999975 79999999998 56899999
Q ss_pred HHHcCC-CCceee-cCChHHHHHcCCccccceeec
Q 027527 148 SEQTKF-KGEVYA-DPNHSSYEALSFVSGVLVTFT 180 (222)
Q Consensus 148 ~~~~~~-pfpil~-Dpd~~lyk~lGl~~~~~~~~~ 180 (222)
.+++++ .++++. |++..+.+.||+...+...+-
T Consensus 81 ~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~li 115 (144)
T 1i5g_A 81 YAKMPWLALPFEDRKGMEFLTTGFDVKSIPTLVGV 115 (144)
T ss_dssp HTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEE
T ss_pred HHhCCccccccCchHHHHHHHHHcCCCCCCEEEEE
Confidence 999886 467665 788999999999877665553
No 92
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.67 E-value=2.6e-16 Score=142.60 Aligned_cols=112 Identities=11% Similarity=0.116 Sum_probs=99.7
Q ss_pred CCCccccCcCCCcE-----EecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcC--
Q 027527 66 SVSEDTKNLLDTVK-----VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP-- 138 (222)
Q Consensus 66 ~~~~~~g~~apdf~-----L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~-- 138 (222)
.....+|+.+|+|+ |.|.+|+.++|+++ ++ +++|++||+.||++|+++++.|+++++++.+.++++|+|+.
T Consensus 48 ~~~l~vG~~aPdF~~~~~wL~d~dG~~vsLsdl-~G-K~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~ 125 (352)
T 2hyx_A 48 AAQLESCGTAPDLKGITGWLNTPGNKPIDLKSL-RG-KVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPE 125 (352)
T ss_dssp CSSCCCCCBCCCCCSCCEEESSGGGCCCCGGGG-TT-SEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCS
T ss_pred ccccCCCCcCCCccccccccCCCCCCEEcHHHh-CC-CEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCc
Confidence 34578899999999 99999999999997 34 56788888999999999999999999999989999999986
Q ss_pred ----CCHHHHHHHHHHcCCCCceeecCChHHHHHcCCccccceee
Q 027527 139 ----GSVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 139 ----~s~~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~~~~~~ 179 (222)
++++.+++|+++++++|+++.|++..+.+.|++...+...+
T Consensus 126 ~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ygV~~~Pt~~l 170 (352)
T 2hyx_A 126 YAFEKVPGNVAKGAANLGISYPIALDNNYATWTNYRNRYWPAEYL 170 (352)
T ss_dssp SGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTTCCEESEEEE
T ss_pred ccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcCCCccCEEEE
Confidence 46789999999999999999999999999999976665443
No 93
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.66 E-value=7.3e-16 Score=122.14 Aligned_cols=98 Identities=14% Similarity=0.146 Sum_probs=86.8
Q ss_pred CCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChh-HHHHHHHHHHhHHHHHh----CCCEEEEEcCC----CHHHHHH
Q 027527 76 DTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDA----SGVALVLIGPG----SVEQART 146 (222)
Q Consensus 76 pdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~-C~~el~~L~~~~~~l~~----~gv~lvaIs~~----s~~~i~~ 146 (222)
|+|+|.|.+|+.++|+++ .++++|++||++||++ |+.+++.|+++++++++ .++++|+|+.| +++.+++
T Consensus 7 p~f~l~~~~G~~~~l~~~--~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~ 84 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADF--RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMAR 84 (171)
T ss_dssp SCCEEEETTSCEEETTTT--TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHH
T ss_pred CCeEEEeCCCCEEeHHHh--CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHH
Confidence 899999999999999997 3457888999999997 99999999999999976 58999999986 5789999
Q ss_pred HHHHcCCCCceeecCC---hHHHHHcCCcccc
Q 027527 147 FSEQTKFKGEVYADPN---HSSYEALSFVSGV 175 (222)
Q Consensus 147 f~~~~~~pfpil~Dpd---~~lyk~lGl~~~~ 175 (222)
|+++++++|+++.|.. ..+.+.||+...+
T Consensus 85 ~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~p 116 (171)
T 2rli_A 85 YVQDFHPRLLGLTGSTKQVAQASHSYRVYYNA 116 (171)
T ss_dssp HHHTTCTTCCEEECCHHHHHHHHHHSCCCCEE
T ss_pred HHHHcCCCeEEEeCCHHHHHHHHHHhCeEEEe
Confidence 9999999999998754 5789999986543
No 94
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.66 E-value=1.1e-15 Score=121.21 Aligned_cols=108 Identities=13% Similarity=0.067 Sum_probs=91.8
Q ss_pred CCCCccccCcCCCcEEecC--CCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC-CH
Q 027527 65 PSVSEDTKNLLDTVKVYDV--NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SV 141 (222)
Q Consensus 65 ~~~~~~~g~~apdf~L~D~--~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~-s~ 141 (222)
......+|+.+|+|++.|. +|+.+.+.++.+++ .+|++|++.|||+|+++++.|++++++ ++.+++|+.+ +.
T Consensus 18 ~~~~~~~G~~~P~f~l~~~~~~g~~~~~~~~~~gk-~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~~~ 92 (168)
T 2b1k_A 18 NLESALIGKPVPKFRLESLDNPGQFYQADVLTQGK-PVLLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKDDR 92 (168)
T ss_dssp -CCCTTTTSBCCCCEEEESSSTTCEEEGGGGCCSS-CEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEESCCH
T ss_pred cccccccCCcCCCeEeecccCCCcEeehhHhcCCC-EEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCCh
Confidence 4445678999999999999 99999998875555 566677799999999999999888765 8999999864 56
Q ss_pred HHHHHHHHHcCCCCc-eeecCChHHHHHcCCccccce
Q 027527 142 EQARTFSEQTKFKGE-VYADPNHSSYEALSFVSGVLV 177 (222)
Q Consensus 142 ~~i~~f~~~~~~pfp-il~Dpd~~lyk~lGl~~~~~~ 177 (222)
+.+++|.++++++|+ ++.|++..+.+.||+...+..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~ 129 (168)
T 2b1k_A 93 QKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAPET 129 (168)
T ss_dssp HHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCSSSEE
T ss_pred HHHHHHHHHcCCCCceeeECcchHHHHHcCccccCEE
Confidence 889999999999998 789999999999999877643
No 95
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.66 E-value=1.9e-17 Score=135.33 Aligned_cols=94 Identities=11% Similarity=0.134 Sum_probs=82.6
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC--------C
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------S 140 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~--------s 140 (222)
+..++.+|+|+|.|.+|+.++|+++ ++ +++|++||++|||+|+.+++.|+++++++++.|+++|+|+.+ +
T Consensus 20 ~~~~~~~p~f~l~d~~G~~~~l~~~-~G-k~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~ 97 (187)
T 3dwv_A 20 MSAASSIFDFEVLDADHKPYNLVQH-KG-SPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGN 97 (187)
T ss_dssp CTTCCSGGGSCCBBTTSCBCCGGGG-TT-SCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSB
T ss_pred hcCCCccCCeEEEcCCCCEeeHHHh-CC-CEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCC
Confidence 5667899999999999999999997 34 578888899999999999999999999999999999999975 5
Q ss_pred HHHHHHHHHH-cCCCCceee--cCChH
Q 027527 141 VEQARTFSEQ-TKFKGEVYA--DPNHS 164 (222)
Q Consensus 141 ~~~i~~f~~~-~~~pfpil~--Dpd~~ 164 (222)
.+.+++|+++ ++++|+++. |.+..
T Consensus 98 ~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 98 EEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp TTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred HHHHHHHHHhccCCCCceeeccccCCc
Confidence 6899999994 599999996 55543
No 96
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.66 E-value=3.5e-16 Score=126.24 Aligned_cols=102 Identities=13% Similarity=0.182 Sum_probs=86.7
Q ss_pred ccccCcCC-CcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCh-hHHHHHHHHHHhHHHHHh--CCCEEEEEcCC---CH
Q 027527 69 EDTKNLLD-TVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCV-LCRKRADYLAAKKDVMDA--SGVALVLIGPG---SV 141 (222)
Q Consensus 69 ~~~g~~ap-df~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp-~C~~el~~L~~~~~~l~~--~gv~lvaIs~~---s~ 141 (222)
+.+|+++| +|+|.|.+|+.++|+++. ++++|++||++||| .|..+++.|+++++++.+ .++++|+|+.| ++
T Consensus 1 m~~G~~~P~~f~l~d~~G~~v~l~~~~--Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~ 78 (170)
T 3me7_A 1 MSLGTYVPGDITLVDSYGNEFQLKNLK--GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTL 78 (170)
T ss_dssp -CTTCBCCTTCEEEETTCCEEEGGGGT--TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCH
T ss_pred CCCCCcCCCCeEEEcCCcCEEchHHhC--CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCH
Confidence 35799999 999999999999999973 45788899999998 799999999999999975 56999999975 77
Q ss_pred HHHHHHHHHcCCCCce----e-ec--CChHHHHHcCCc
Q 027527 142 EQARTFSEQTKFKGEV----Y-AD--PNHSSYEALSFV 172 (222)
Q Consensus 142 ~~i~~f~~~~~~pfpi----l-~D--pd~~lyk~lGl~ 172 (222)
+.+++|+++++.+++. + .| ...++.++||+.
T Consensus 79 ~~~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~ 116 (170)
T 3me7_A 79 EDIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFR 116 (170)
T ss_dssp HHHHHHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeE
Confidence 9999999999998863 2 23 447889998864
No 97
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.65 E-value=6.6e-17 Score=129.55 Aligned_cols=88 Identities=17% Similarity=0.175 Sum_probs=67.2
Q ss_pred cCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcC--------CCHHH
Q 027527 72 KNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------GSVEQ 143 (222)
Q Consensus 72 g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~--------~s~~~ 143 (222)
+..+|+|++.|.+|+.++|+++ ++ +++|++||++||++|+ +++.|+++++++.+.|+++|+|+. ++.+.
T Consensus 9 ~~~~~~f~l~d~~G~~~~l~~~-~G-k~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~ 85 (171)
T 3cmi_A 9 MSEFYKLAPVDKKGQPFPFDQL-KG-KVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEE 85 (171)
T ss_dssp -CGGGGCCCBBTTSCBCCGGGG-TT-CEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC---------
T ss_pred hhheeeeEEEcCCCCEecHHHc-CC-CEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHH
Confidence 5678999999999999999997 34 5677778899999999 999999999999999999999987 46678
Q ss_pred HHHHH-HHcCCCCceeecCC
Q 027527 144 ARTFS-EQTKFKGEVYADPN 162 (222)
Q Consensus 144 i~~f~-~~~~~pfpil~Dpd 162 (222)
+++|+ ++++++|+++.|++
T Consensus 86 ~~~~~~~~~~~~~p~~~d~d 105 (171)
T 3cmi_A 86 IAQFCQLNYGVTFPIMKKID 105 (171)
T ss_dssp ---------CCCSCBBCCCB
T ss_pred HHHHHHhccCCCceEEeecc
Confidence 99999 99999999999754
No 98
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.64 E-value=5.9e-16 Score=128.01 Aligned_cols=102 Identities=12% Similarity=0.104 Sum_probs=86.4
Q ss_pred ccccCcC--CCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChh-HHHHHHHHHHhHHHHHhC---CCEEEEEcCC---
Q 027527 69 EDTKNLL--DTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDAS---GVALVLIGPG--- 139 (222)
Q Consensus 69 ~~~g~~a--pdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~-C~~el~~L~~~~~~l~~~---gv~lvaIs~~--- 139 (222)
..+|+.+ |+|+|.|.+|+.++|+++ ++ +++|++||++|||+ |+.+++.|+++++++.+. ++++|+|+.|
T Consensus 13 ~~~g~~~~~p~f~l~d~~G~~v~l~~~-~G-k~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~ 90 (200)
T 2b7k_A 13 RGYGKPSLGGPFHLEDMYGNEFTEKNL-LG-KFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPAR 90 (200)
T ss_dssp ---CCCCCCCCCEEEETTSCEEEGGGG-TT-SCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTT
T ss_pred hccCCCCcCCCEEEEcCCCCEEeHHHc-CC-CEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCC
Confidence 4567775 999999999999999997 34 57888889999996 999999999999999754 8999999988
Q ss_pred -CHHHHHHHHHHcCCCCceee---cCChHHHHHcCCc
Q 027527 140 -SVEQARTFSEQTKFKGEVYA---DPNHSSYEALSFV 172 (222)
Q Consensus 140 -s~~~i~~f~~~~~~pfpil~---Dpd~~lyk~lGl~ 172 (222)
+++.+++|+++++.+|+.+. |....+.+.||+.
T Consensus 91 d~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~gv~ 127 (200)
T 2b7k_A 91 DSPAVLKEYLSDFHPSILGLTGTFDEVKNACKKYRVY 127 (200)
T ss_dssp CCHHHHHHHHTTSCTTCEEEECCHHHHHHHHHHTTC-
T ss_pred CCHHHHHHHHHHcCCCceEEeCCHHHHHHHHHHcCcE
Confidence 67899999999999998776 4467889999986
No 99
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.64 E-value=7.3e-16 Score=119.97 Aligned_cols=107 Identities=17% Similarity=0.066 Sum_probs=88.1
Q ss_pred CCCccccCcCCCcEEecCCC--------CeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEc
Q 027527 66 SVSEDTKNLLDTVKVYDVNG--------NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (222)
Q Consensus 66 ~~~~~~g~~apdf~L~D~~G--------~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs 137 (222)
.+...+|+.+|+|++.|.+| +.++++++ ++ +.+|++|++.||++|+++++.|++++++ .++.+++|+
T Consensus 5 ~~~~~~g~~~p~f~l~~~~g~~~~~~~~~~~~l~~~-~g-k~~ll~f~~~~C~~C~~~~~~l~~l~~~---~~v~~v~v~ 79 (156)
T 1kng_A 5 IPSALIGRPAPQTALPPLEGLQADNVQVPGLDPAAF-KG-KVSLVNVWASWCVPCHDEAPLLTELGKD---KRFQLVGIN 79 (156)
T ss_dssp -------CBCCCCCBCCCTTCEETTEECCCBCGGGG-TT-SCEEEEEECTTCHHHHHHHHHHHHHTTC---TTSEEEEEE
T ss_pred hhhHHhCCCCCCceeeeccCcccccccCceechHHh-CC-CEEEEEEEcccCHhHHHHHHHHHHHHhc---CCeEEEEEE
Confidence 44568899999999999999 99999997 34 4567777899999999999999998776 459999998
Q ss_pred CC-CHHHHHHHHHHcCCCCc-eeecCChHHHHHcCCccccce
Q 027527 138 PG-SVEQARTFSEQTKFKGE-VYADPNHSSYEALSFVSGVLV 177 (222)
Q Consensus 138 ~~-s~~~i~~f~~~~~~pfp-il~Dpd~~lyk~lGl~~~~~~ 177 (222)
.+ +.+.+++|.++++++|+ ++.|++..+.+.||+...+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~ 121 (156)
T 1kng_A 80 YKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVPET 121 (156)
T ss_dssp ESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSSCEE
T ss_pred CCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCccCeE
Confidence 65 66899999999999999 999999999999999877743
No 100
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.64 E-value=7e-16 Score=119.90 Aligned_cols=107 Identities=11% Similarity=0.039 Sum_probs=91.4
Q ss_pred cccCcCCC-cEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHh-CCCEEEEEcCC-CHHHHHH
Q 027527 70 DTKNLLDT-VKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPG-SVEQART 146 (222)
Q Consensus 70 ~~g~~apd-f~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~-~gv~lvaIs~~-s~~~i~~ 146 (222)
..++.+|+ |++.|.+| .++++++ .++.+|++|++.||++|+++++.|+++++++.+ .++.+++|+.+ +.+.+++
T Consensus 3 ~~~~~~P~~f~l~~~~g-~~~l~~~--~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~ 79 (146)
T 1o8x_A 3 GLDKYLPGIEKLRRGDG-EVEVKSL--AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAG 79 (146)
T ss_dssp CGGGTSTTCCEEEETTE-EEEGGGG--TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHH
T ss_pred chHhhCCCceEEEcCCC-CCcHHHh--CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHH
Confidence 46889999 99999999 9999997 345678888899999999999999999999973 78999999998 4678999
Q ss_pred HHHHcCC-CCceee-cCChHHHHHcCCccccceee
Q 027527 147 FSEQTKF-KGEVYA-DPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 147 f~~~~~~-pfpil~-Dpd~~lyk~lGl~~~~~~~~ 179 (222)
|.+++++ .++++. |.+..+.+.||+...+...+
T Consensus 80 ~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~Pt~~l 114 (146)
T 1o8x_A 80 YFAKMPWLAVPFAQSEAVQKLSKHFNVESIPTLIG 114 (146)
T ss_dssp HHTTCSSEECCGGGHHHHHHHHHHTTCCSSSEEEE
T ss_pred HHHHCCceeeccchhhHHHHHHHHhCCCCCCEEEE
Confidence 9999885 466665 78899999999987765554
No 101
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.61 E-value=7.5e-16 Score=121.06 Aligned_cols=107 Identities=10% Similarity=0.055 Sum_probs=91.9
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC------CHH
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG------SVE 142 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~------s~~ 142 (222)
..+++.+| +|.|.+|+.+++.++ ++ +.+|++|++.||++|+++++.|+++++++...|+++|+|+.+ +.+
T Consensus 14 ~~~~~~~p--~l~~~~g~~~~~~~~-~g-k~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~ 89 (164)
T 2h30_A 14 ATVPHTMS--TMKTADNRPASVYLK-KD-KPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDG 89 (164)
T ss_dssp CCHHHHHT--TCEETTSSBGGGGCC-TT-SCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTT
T ss_pred cccCCcCC--ccCCCCCCEeeHHHh-CC-CEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHH
Confidence 34566666 788999999999996 34 457777789999999999999999999999999999999863 457
Q ss_pred HHHHHHHHcCCC-CceeecCChHHHHHcCCccccceee
Q 027527 143 QARTFSEQTKFK-GEVYADPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 143 ~i~~f~~~~~~p-fpil~Dpd~~lyk~lGl~~~~~~~~ 179 (222)
.+++|.++.+++ ++++.|++..+.+.||+...+...+
T Consensus 90 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~l 127 (164)
T 2h30_A 90 EFQKWYAGLNYPKLPVVTDNGGTIAQNLNISVYPSWAL 127 (164)
T ss_dssp HHHHHHTTSCCTTSCEEECTTCHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHhCCCCcceEEEcCchHHHHHcCCCccceEEE
Confidence 899999998999 8999999999999999987776554
No 102
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.60 E-value=1.6e-15 Score=116.94 Aligned_cols=107 Identities=14% Similarity=0.109 Sum_probs=90.2
Q ss_pred cccCcCCCc-EEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHH-hCCCEEEEEcCCC-HHHHHH
Q 027527 70 DTKNLLDTV-KVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMD-ASGVALVLIGPGS-VEQART 146 (222)
Q Consensus 70 ~~g~~apdf-~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~-~~gv~lvaIs~~s-~~~i~~ 146 (222)
..|+.+|+| ++.|.+| .++++++ ++ +.+|++|++.||++|+++++.|+++++++. +.++.+++|+.++ .+.+++
T Consensus 3 ~~g~~~p~~~~l~~~~g-~~~l~~~-~g-k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~ 79 (144)
T 1o73_A 3 GLAKYLPGATNLLSKSG-EVSLGSL-VG-KTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHD 79 (144)
T ss_dssp GGGGTSCTTCCBBCTTS-CBCSGGG-TT-CEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHH
T ss_pred chhhhCccceEeecCCC-cCcHHHh-CC-CEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHH
Confidence 568999997 9999999 9999997 34 567788889999999999999999999997 4789999999985 478899
Q ss_pred HHHHcCCC-Cceee-cCChHHHHHcCCccccceee
Q 027527 147 FSEQTKFK-GEVYA-DPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 147 f~~~~~~p-fpil~-Dpd~~lyk~lGl~~~~~~~~ 179 (222)
|.+++++. +++.. |.+..+.+.||+...+...+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~l 114 (144)
T 1o73_A 80 YYGKMPWLALPFDQRSTVSELGKTFGVESIPTLIT 114 (144)
T ss_dssp HHTTCSSEECCTTCHHHHHHHHHHHTCCSSSEEEE
T ss_pred HHHhCCceEeeccchhHHHHHHHHcCCCCCCEEEE
Confidence 99987753 55544 77889999999987766554
No 103
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.58 E-value=9.7e-16 Score=122.90 Aligned_cols=108 Identities=11% Similarity=0.053 Sum_probs=91.7
Q ss_pred ccccCcCCCc-EEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHh-CCCEEEEEcCCCH-HHHH
Q 027527 69 EDTKNLLDTV-KVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGSV-EQAR 145 (222)
Q Consensus 69 ~~~g~~apdf-~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~-~gv~lvaIs~~s~-~~i~ 145 (222)
..+|+.+|+| ++.|.+| .++|+++ ++ +++|++||+.||++|+++++.|+++++++.+ .++++|+|+.++. +.++
T Consensus 22 ~~vG~~~P~f~~l~~~~g-~v~l~~~-~g-k~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~ 98 (165)
T 3s9f_A 22 SGVAKHLGEALKLRKQAD-TADMDSL-SG-KTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFN 98 (165)
T ss_dssp CHHHHHHHHTSCEEETTE-EECSGGG-TT-SEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHH
T ss_pred hhhcccCCcceeeecCCC-cccHHHc-CC-CEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHH
Confidence 3689999999 9999999 9999997 34 5678888899999999999999999999976 7999999998865 7899
Q ss_pred HHHHHcCCC-CceeecCC-hHHHHHcCCccccceee
Q 027527 146 TFSEQTKFK-GEVYADPN-HSSYEALSFVSGVLVTF 179 (222)
Q Consensus 146 ~f~~~~~~p-fpil~Dpd-~~lyk~lGl~~~~~~~~ 179 (222)
+|.++.++. ++++.|.+ ..+.+.||+...+...+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~l 134 (165)
T 3s9f_A 99 AYYAKMPWLSIPFANRNIVEALTKKYSVESIPTLIG 134 (165)
T ss_dssp HHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEE
T ss_pred HHHHhCCCcccccCchhHHHHHHHHcCCCCCCEEEE
Confidence 999988754 56555444 89999999987776555
No 104
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.34 E-value=2.1e-16 Score=121.37 Aligned_cols=107 Identities=9% Similarity=0.142 Sum_probs=89.5
Q ss_pred CcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHH--hCCCEEEEEcCCC-HHHHHHHHH
Q 027527 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMD--ASGVALVLIGPGS-VEQARTFSE 149 (222)
Q Consensus 73 ~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~--~~gv~lvaIs~~s-~~~i~~f~~ 149 (222)
+.+|+|+|.|.+|+.+++++++++++.+|++|++.|||+|+++++.|+++++++. ..++.+++|+.++ .+.+++|++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~ 81 (143)
T 2lus_A 2 EFIQGIKLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMM 81 (143)
Confidence 5689999999999999999944555478888899999999999999999999985 3589999999884 478999999
Q ss_pred HcCCCCc---eeecCChHHHHHcCCccccceee
Q 027527 150 QTKFKGE---VYADPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 150 ~~~~pfp---il~Dpd~~lyk~lGl~~~~~~~~ 179 (222)
+++++++ +..|++..+.+.||+...+...+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l 114 (143)
T 2lus_A 82 ESHGDWLAIPYRSGPASNVTAKYGITGIPALVI 114 (143)
Confidence 9988864 55677789999999876654433
No 105
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.54 E-value=2.6e-14 Score=115.63 Aligned_cols=93 Identities=16% Similarity=0.184 Sum_probs=77.8
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCh-hHHHHHHHHHHhHHHHHhCC--CEEEEEcC----CCH
Q 027527 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCV-LCRKRADYLAAKKDVMDASG--VALVLIGP----GSV 141 (222)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp-~C~~el~~L~~~~~~l~~~g--v~lvaIs~----~s~ 141 (222)
..++.++|+|+|.|.+|++++|+++ .++++|++||++||| .|..++..|.++++++++.| +++|+|+. |++
T Consensus 6 ~P~~~~~PdF~L~d~~G~~v~l~d~--~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp 83 (170)
T 4hde_A 6 KPLNWDLETFQFTNQDGKPFGTKDL--KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKP 83 (170)
T ss_dssp SCCCBCCCCCEEECTTSCEEEHHHH--TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCH
T ss_pred cCCCCcCCCcEEECCCCCEEeHHHh--CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccH
Confidence 4578899999999999999999997 446788899999998 79999999999999887654 78888885 578
Q ss_pred HHHHHHHHHcCCCCc---eeecCCh
Q 027527 142 EQARTFSEQTKFKGE---VYADPNH 163 (222)
Q Consensus 142 ~~i~~f~~~~~~pfp---il~Dpd~ 163 (222)
+.+++|+++++..++ ++.+++.
T Consensus 84 ~~l~~y~~~~~~~~~~~~~ltg~~~ 108 (170)
T 4hde_A 84 ENLKAFIQKFTEDTSNWNLLTGYSL 108 (170)
T ss_dssp HHHHHHHTTTCSCCTTEEEEBCSCH
T ss_pred HHHHHHHHHcCCCCCCceecCcccH
Confidence 999999999887654 4565543
No 106
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=98.81 E-value=2.4e-08 Score=83.75 Aligned_cols=106 Identities=12% Similarity=0.147 Sum_probs=85.8
Q ss_pred ccccCcCCC--cEEe-------cCC----C--CeEeCCCcc-CCCeEEEEEEcCCCChhHHH-HHHHHHHhHHHH-HhCC
Q 027527 69 EDTKNLLDT--VKVY-------DVN----G--NAIPISDLW-KDRKAVVAFARHFGCVLCRK-RADYLAAKKDVM-DASG 130 (222)
Q Consensus 69 ~~~g~~apd--f~L~-------D~~----G--~~v~Lsdl~-~~~~vvVvF~R~~~Cp~C~~-el~~L~~~~~~l-~~~g 130 (222)
..+++++|. +++. +.+ | +++++++++ +++++||+++++.+.|.|.. +++.+.+.++++ +++|
T Consensus 26 ~~v~~~~P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~kG 105 (199)
T 4h86_A 26 DLVNKKFPAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKEKE 105 (199)
T ss_dssp TTTTSBCCCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHHSC
T ss_pred HHhCCCCCCCCceEEEecCCccccccccCCCCeeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHhcC
Confidence 568888985 3322 111 2 467787877 57889999999999999976 799999998875 7889
Q ss_pred C-EEEEEcCCCHHHHHHHHHHcCCC----CceeecCChHHHHHcCCccc
Q 027527 131 V-ALVLIGPGSVEQARTFSEQTKFK----GEVYADPNHSSYEALSFVSG 174 (222)
Q Consensus 131 v-~lvaIs~~s~~~i~~f~~~~~~p----fpil~Dpd~~lyk~lGl~~~ 174 (222)
+ +|+.|+.+++-..++|.+..+.. +++++|++.++.++||+...
T Consensus 106 vd~I~ciSVND~FVm~AW~k~~~~~~~~~i~~laD~~~eftkalGl~~~ 154 (199)
T 4h86_A 106 VDQVIVVTVDNPFANQAWAKSLGVKDTTHIKFASDPGCAFTKSIGFELA 154 (199)
T ss_dssp CCEEEEEESSCHHHHHHHHHHTTCCCCSSEEEEECGGGHHHHHTTCEEE
T ss_pred CcEEEEEEcCCHHHHHHHHHHhcccccccccccCCcchHHHHhcCceee
Confidence 8 58899999999999999988764 67899999999999998543
No 107
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=98.77 E-value=1.5e-09 Score=83.52 Aligned_cols=93 Identities=12% Similarity=0.110 Sum_probs=65.2
Q ss_pred ccccCcCCCcE-EecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHH---HHhHHHHHhCCCEEEEEcCCCH-HH
Q 027527 69 EDTKNLLDTVK-VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSV-EQ 143 (222)
Q Consensus 69 ~~~g~~apdf~-L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L---~~~~~~l~~~gv~lvaIs~~s~-~~ 143 (222)
...++.+|+|. +.+.++....+++. + ++.+|++|++.||++|++..+.+ .++.+++. ++.++.|..++. +.
T Consensus 4 ~~~~~~~~~f~~~~~~~~~~~~l~~~-~-~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~~~~~ 79 (134)
T 2fwh_A 4 TAQTQTHLNFTQIKTVDELNQALVEA-K-GKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTANDAQ 79 (134)
T ss_dssp ------CCCCEECCSHHHHHHHHHHH-T-TSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTTCCHH
T ss_pred ccccccCCCcEEecCHHHHHHHHHHh-c-CCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCCCcch
Confidence 45677888897 66667766777765 2 45677778899999999988887 77777664 599999988654 56
Q ss_pred HHHHHHHcCCC-Cc--eeecCChHH
Q 027527 144 ARTFSEQTKFK-GE--VYADPNHSS 165 (222)
Q Consensus 144 i~~f~~~~~~p-fp--il~Dpd~~l 165 (222)
..++++++++. +| ++.|+++++
T Consensus 80 ~~~l~~~~~v~~~Pt~~~~d~~G~~ 104 (134)
T 2fwh_A 80 DVALLKHLNVLGLPTILFFDGQGQE 104 (134)
T ss_dssp HHHHHHHTTCCSSSEEEEECTTSCB
T ss_pred HHHHHHHcCCCCCCEEEEECCCCCE
Confidence 66777777754 34 788888876
No 108
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.72 E-value=6.3e-09 Score=78.43 Aligned_cols=87 Identities=8% Similarity=0.070 Sum_probs=59.2
Q ss_pred CcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEc--CCCHHHHHHHHHH
Q 027527 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG--PGSVEQARTFSEQ 150 (222)
Q Consensus 73 ~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs--~~s~~~i~~f~~~ 150 (222)
+.+++++..|.+|+.... . ...++.+|++|++.||++|++..+.|.++.+++. .++.++.|. .+... +++++
T Consensus 4 ~~~~~l~~~~~~~~~~~~-~-~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~~d~~~---~~~~~ 77 (126)
T 2l57_A 4 EGIKQINFQSINVVENLE-E-AKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-GKFNIYYARLEEEKNI---DLAYK 77 (126)
T ss_dssp CCSSCTTTTCCSEESSTT-T-CCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETTSSHHH---HHHHH
T ss_pred cccCCCCccccchhHHHH-H-HhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCCCCchH---HHHHH
Confidence 345556655666554332 2 2345567888899999999999999999988886 679999999 66433 33344
Q ss_pred cC---CCCceeecCChHH
Q 027527 151 TK---FKGEVYADPNHSS 165 (222)
Q Consensus 151 ~~---~pfpil~Dpd~~l 165 (222)
++ +|.-++.|+++++
T Consensus 78 ~~v~~~Pt~~~~~~~G~~ 95 (126)
T 2l57_A 78 YDANIVPTTVFLDKEGNK 95 (126)
T ss_dssp TTCCSSSEEEEECTTCCE
T ss_pred cCCcceeEEEEECCCCCE
Confidence 44 4444777877654
No 109
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.68 E-value=1.3e-08 Score=77.90 Aligned_cols=84 Identities=10% Similarity=0.002 Sum_probs=61.5
Q ss_pred EEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCCcee
Q 027527 79 KVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVY 158 (222)
Q Consensus 79 ~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~pfpil 158 (222)
.|.+.+|+...|+++ .++.+|+.|++.||++|++..+.|.++.+++.+ .+.++.|..+....+.+-..-.++|.-++
T Consensus 35 ~l~~~~~~~~~l~~~--~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 111 (141)
T 3hxs_A 35 KIADYENHSKEWKYL--GDKPAIVDFYADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDKEPELARDFGIQSIPTIWF 111 (141)
T ss_dssp HTCCCSSCCCCCCCC--CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred HhhccccchhHHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCCCHHHHHHcCCCCcCEEEE
Confidence 466788899999886 455677888899999999999999999988864 58999998876543322112223444477
Q ss_pred ecCChHH
Q 027527 159 ADPNHSS 165 (222)
Q Consensus 159 ~Dpd~~l 165 (222)
.|+++++
T Consensus 112 ~~~~g~~ 118 (141)
T 3hxs_A 112 VPMKGEP 118 (141)
T ss_dssp ECSSSCC
T ss_pred EeCCCCE
Confidence 7887764
No 110
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.55 E-value=4.2e-08 Score=74.40 Aligned_cols=68 Identities=10% Similarity=0.135 Sum_probs=46.9
Q ss_pred cccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 70 ~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
.....+|+++ +.+++.++.... .++.+|+.|++.||++|++..+.|.++.+++. .++.++.|..+...
T Consensus 19 ~~~~~~~~~~--~~~~~~~~~~~~--~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~-~~v~~~~vd~d~~~ 86 (128)
T 3ul3_B 19 RMFKKVPRLQ--QNGSNIINGVNM--KNTVIVLYFFAKWCQACTMQSTEMDKLQKYYG-KRIYLLKVDLDKNE 86 (128)
T ss_dssp -------CCC--CCCCSSSSBTTS--CCSEEEEEEECTTCHHHHHHHHHHHHHHHHHG-GGEEEEEEEGGGCH
T ss_pred HHhccCCccc--cCCccHHHHHHc--cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhc-CCeEEEEEECCCCH
Confidence 4455667666 455555555443 55678888899999999999999999999886 36888888876543
No 111
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=98.54 E-value=2.4e-08 Score=78.75 Aligned_cols=92 Identities=14% Similarity=0.142 Sum_probs=60.2
Q ss_pred cccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEc-CCCChhHHHHHHHH---HHhHHHHHhCCCEEEEEcCCCH----
Q 027527 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFAR-HFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSV---- 141 (222)
Q Consensus 70 ~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R-~~~Cp~C~~el~~L---~~~~~~l~~~gv~lvaIs~~s~---- 141 (222)
..+...+++ +..|+.+.+++. +++ .+|+.|+ +.||++|+++.+.| .++.+.+ ..++.++.|..++.
T Consensus 25 ~~~~~~~~~---~~~~~~~~~a~~-~gk-~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~-~~~~~~v~vd~~~~~~~~ 98 (154)
T 2ju5_A 25 PIAAANLQW---ESYAEALEHSKQ-DHK-PIGLFFTGSDWCMWCIKMQDQILQSSEFKHFA-GVHLHMVEVDFPQKNHQP 98 (154)
T ss_dssp SSCCCCCCE---ECHHHHHHHHHH-HCC-CEEEEEECTTTCHHHHHHHHHTTTSHHHHHHH-HHHCEEEEEECCSSCCCC
T ss_pred hcccCCCCC---CCHHHHHHHHHh-CCC-eEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHh-cCcEEEEEecCccccCCC
Confidence 444445555 445777777764 344 5666666 99999999999999 5554433 34688888887653
Q ss_pred ----HHHHHHHHHcCCC---CceeecCChHHHH
Q 027527 142 ----EQARTFSEQTKFK---GEVYADPNHSSYE 167 (222)
Q Consensus 142 ----~~i~~f~~~~~~p---fpil~Dpd~~lyk 167 (222)
+...++++++++. .-++.|+++++..
T Consensus 99 ~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~~~ 131 (154)
T 2ju5_A 99 EEQRQKNQELKAQYKVTGFPELVFIDAEGKQLA 131 (154)
T ss_dssp HHHHHHHHHHHHHTTCCSSSEEEEECTTCCEEE
T ss_pred hhhHhhHHHHHHHcCCCCCCEEEEEcCCCCEEE
Confidence 3444556666644 3477888876544
No 112
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.42 E-value=3.9e-07 Score=68.50 Aligned_cols=68 Identities=7% Similarity=-0.038 Sum_probs=48.9
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCCceeecCChH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNHS 164 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~pfpil~Dpd~~ 164 (222)
.++.+|++|++.||++|++..+.|.++.+++.. .+.++.|..+....+.+-..-.++|.-++.|.++.
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~~ 101 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD-VVKVGAVNADKHQSLGGQYGVQGFPTIKIFGANKN 101 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHHTCCSSSEEEEESSCTT
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC-ceEEEEEeCCCCHHHHHHcCCCccCEEEEEeCCCC
Confidence 456788888999999999999999999888754 38899998876543322222234454467777665
No 113
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=98.41 E-value=1.4e-07 Score=74.80 Aligned_cols=45 Identities=20% Similarity=0.327 Sum_probs=32.3
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHH---HHhHHHHHhCCCEEEEEcCCCH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L---~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
.+++|||.||++||++|++....+ .++.+.+++ ++.++.|..++.
T Consensus 46 ~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~ 93 (172)
T 3f9u_A 46 HNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNK 93 (172)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCC
T ss_pred cCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcc
Confidence 357899999999999999864333 334444433 789999988754
No 114
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=98.40 E-value=2.1e-08 Score=75.42 Aligned_cols=77 Identities=9% Similarity=0.122 Sum_probs=54.1
Q ss_pred EecCCCCeEeCC-CccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC---CCC
Q 027527 80 VYDVNGNAIPIS-DLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK---FKG 155 (222)
Q Consensus 80 L~D~~G~~v~Ls-dl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~---~pf 155 (222)
+.+.+|....|. .+.+.++.+|++|++.||+.|++..+.|.++.+++ .++.++.|..+.... ++++++ +|.
T Consensus 5 v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~~~~---~~~~~~i~~~Pt 79 (118)
T 2f51_A 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDKNGN---AADAYGVSSIPA 79 (118)
T ss_dssp SEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTCHH---HHHHTTCCSSSE
T ss_pred ceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCCCHH---HHHhcCCCCCCE
Confidence 445566666666 33334567888889999999999999999988887 689999999875533 333334 443
Q ss_pred ceeecC
Q 027527 156 EVYADP 161 (222)
Q Consensus 156 pil~Dp 161 (222)
-++.|.
T Consensus 80 ~~~~~~ 85 (118)
T 2f51_A 80 LFFVKK 85 (118)
T ss_dssp EEEEEE
T ss_pred EEEEeC
Confidence 355555
No 115
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.37 E-value=1.4e-07 Score=73.18 Aligned_cols=71 Identities=17% Similarity=0.124 Sum_probs=55.0
Q ss_pred cccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHH
Q 027527 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (222)
Q Consensus 70 ~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~ 143 (222)
..+..+++..+.+.+++.+. ++...++.+|+.|++.||++|++..+.|.++.+++.. .+.++.|..+....
T Consensus 30 ~~~~~~~~~~v~~l~~~~~~--~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~ 100 (148)
T 3p2a_A 30 RCGHSLFDGEVINATAETLD--KLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG-KVRFVKVNTEAEPA 100 (148)
T ss_dssp TTCCBTTCCCCEECCTTTHH--HHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHH
T ss_pred hcCCccccCCceecCHHHHH--HHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECcCCHH
Confidence 44666778888888877654 3334567788888999999999999999999988754 48999998876543
No 116
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=98.37 E-value=3.8e-07 Score=69.09 Aligned_cols=69 Identities=14% Similarity=0.160 Sum_probs=50.5
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHH--HhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCC------CCceeecCChHHH
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLA--AKKDVMDASGVALVLIGPGSVEQARTFSEQTKF------KGEVYADPNHSSY 166 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~--~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~------pfpil~Dpd~~ly 166 (222)
++.+|++|++.||++|+...+.|. ++.+++.+ ++.++.|..++.+...++++++++ |.-++.|+++++.
T Consensus 29 ~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~ 105 (133)
T 3fk8_A 29 HKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVR 105 (133)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEE
T ss_pred CCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEE
Confidence 567888889999999999999999 88887754 699999998433333344444444 5457888887653
No 117
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.36 E-value=3.6e-07 Score=69.57 Aligned_cols=60 Identities=17% Similarity=0.213 Sum_probs=45.8
Q ss_pred EecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCC--CEEEEEcCCCH
Q 027527 80 VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASG--VALVLIGPGSV 141 (222)
Q Consensus 80 L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~g--v~lvaIs~~s~ 141 (222)
+.+.+++.+. ++.+.++.+|++|++.||+.|++..+.|.++.+++.+.+ +.++.|..+..
T Consensus 19 v~~l~~~~~~--~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~ 80 (140)
T 2dj1_A 19 VWVLNDGNFD--NFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSA 80 (140)
T ss_dssp EEECCTTTHH--HHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTC
T ss_pred CEEcChHhHH--HHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCccc
Confidence 4444555433 334456788999999999999999999999999997764 88888877654
No 118
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.35 E-value=8.3e-08 Score=77.81 Aligned_cols=69 Identities=14% Similarity=0.189 Sum_probs=49.7
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH-HHHHHHHHH--cCCCCceeecCChHHH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQARTFSEQ--TKFKGEVYADPNHSSY 166 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~-~~i~~f~~~--~~~pfpil~Dpd~~ly 166 (222)
+++++|+.||++|||+|+.+++.|.++.++.. ++.++.|..|.. +.+++|.++ .++|--++.|.++++.
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~G~~~ 124 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKGRAEDDLRQRLALERIAIPLVLVLDEEFNLL 124 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTTCCEE
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCCCCEE
Confidence 34678888999999999999999999987653 688888877643 334455422 2455448888875543
No 119
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.33 E-value=5.2e-07 Score=70.96 Aligned_cols=99 Identities=11% Similarity=0.017 Sum_probs=59.7
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC-Cc-eeecCChH-HHHHcCCc
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GE-VYADPNHS-SYEALSFV 172 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p-fp-il~Dpd~~-lyk~lGl~ 172 (222)
.++.+|+.|++.||++|+.+.+.|.++.+++.+. +.++.|..+.... +++++++. +| ++.+.+++ ++-.+|..
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~~~~---l~~~~~v~~~Pt~~~~~~G~~v~~~~g~~ 97 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQTAV---YTQYFDISYIPSTVFFFNGQHMKVDYGSP 97 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTTCCH---HHHHTTCCSSSEEEEEETTEEEEEECSSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCcCHH---HHHHcCCCccCeEEEEECCeEEEeecCCC
Confidence 4577899999999999999999999998887543 8888888875433 34444543 33 22444443 32223322
Q ss_pred cc--cce-eeccchhHHHHHHHHHHHHhh
Q 027527 173 SG--VLV-TFTPKAGLKIIQSYMEGYRQD 198 (222)
Q Consensus 173 ~~--~~~-~~~P~a~~~~l~~~~~g~r~~ 198 (222)
.. ..+ ...+..+...+..+.++.+++
T Consensus 98 ~~~~~~G~~~~~~~l~~~l~~~~~~~~~g 126 (149)
T 3gix_A 98 DHTKFVGSFKTKQDFIDLIEVIYRGAMRG 126 (149)
T ss_dssp CCSCEESCCSSHHHHHHHHHHHHHHHHTT
T ss_pred CCCeEeeecCCHHHHHHHHHHHHHHhhcC
Confidence 21 111 112234555666666665544
No 120
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.32 E-value=7.8e-07 Score=68.09 Aligned_cols=66 Identities=9% Similarity=0.088 Sum_probs=49.3
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC---CCCceeecCChHH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK---FKGEVYADPNHSS 165 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~---~pfpil~Dpd~~l 165 (222)
+++.+|+.|++.||++|++..+.|.++.+++.+ ++.++.|..+.... ++++++ +|.-++.|++++.
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~---l~~~~~v~~~Pt~~~~~~~G~~ 105 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEKEQE---LAGAFGIRSIPSILFIPMEGKP 105 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHH---HHHHTTCCSSCEEEEECSSSCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCCCHH---HHHHcCCCCCCEEEEECCCCcE
Confidence 446778888899999999999999999888754 49999998876543 333344 4444677887764
No 121
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.31 E-value=1.8e-07 Score=69.07 Aligned_cols=70 Identities=10% Similarity=0.037 Sum_probs=48.1
Q ss_pred CCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCCceeecC
Q 027527 90 ISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADP 161 (222)
Q Consensus 90 Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~pfpil~Dp 161 (222)
|.+..++++.+|++|++.||+.|++..+.|.++.+++. ++.++.|..+....+.+-..-.++|.-++.+.
T Consensus 17 f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~ 86 (109)
T 3f3q_A 17 FDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP--QADFYKLDVDELGDVAQKNEVSAMPTLLLFKN 86 (109)
T ss_dssp HHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred HHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCCCHHHHHHcCCCccCEEEEEEC
Confidence 33444556788899999999999999999999988874 48899998875543322222223443355553
No 122
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.27 E-value=5.5e-07 Score=65.57 Aligned_cols=68 Identities=9% Similarity=0.080 Sum_probs=45.6
Q ss_pred CCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHH-HHHHHHcCCCCceeec
Q 027527 90 ISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA-RTFSEQTKFKGEVYAD 160 (222)
Q Consensus 90 Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i-~~f~~~~~~pfpil~D 160 (222)
|.++.+.++.+|+.|++.||++|+...+.+.++.+++. ++.++.|..+....+ ++| .-.++|--++.+
T Consensus 11 ~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~~~~l~~~~-~v~~~Pt~~~~~ 79 (105)
T 4euy_A 11 LATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQDMQEIAGRY-AVFTGPTVLLFY 79 (105)
T ss_dssp CSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECCC----------CCCCEEEEEE
T ss_pred HHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCCCHHHHHhc-CCCCCCEEEEEe
Confidence 44545556788999999999999999999999988873 688998988755433 333 223455334444
No 123
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.27 E-value=3e-08 Score=79.28 Aligned_cols=88 Identities=11% Similarity=0.173 Sum_probs=55.5
Q ss_pred CCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHH--HHHHHHH-c
Q 027527 75 LDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ--ARTFSEQ-T 151 (222)
Q Consensus 75 apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~--i~~f~~~-~ 151 (222)
.+++...|.+ +.+..... .++.+||.|++.||++|+.+.+.|.++.+.. +.++.++.|..+.... .+.|.-. .
T Consensus 27 ~~~i~w~~~~-~~~~~~~~--~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~-~~~~~~~~v~~d~~~~~~~~~~~~~~~ 102 (164)
T 1sen_A 27 GDHIHWRTLE-DGKKEAAA--SGLPLMVIIHKSWCGACKALKPKFAESTEIS-ELSHNFVMVNLEDEEEPKDEDFSPDGG 102 (164)
T ss_dssp CTTSCBCCHH-HHHHHHHH--HTCCEEEEEECTTCHHHHHHHHHHHTCHHHH-HHHTTSEEEEEEGGGSCSCGGGCTTCS
T ss_pred cccccccCHH-HHHHHHHh--cCCeEEEEEECCCCHHHHHHHHHHHHHHHHh-hcCCeEEEEEecCCchHHHHHhcccCC
Confidence 3445444444 34444332 3456778888999999999999999976554 3356777777765432 2333211 3
Q ss_pred CCCCceeecCChHHH
Q 027527 152 KFKGEVYADPNHSSY 166 (222)
Q Consensus 152 ~~pfpil~Dpd~~ly 166 (222)
++|.-++.|+++++.
T Consensus 103 ~~Pt~~~~d~~G~~~ 117 (164)
T 1sen_A 103 YIPRILFLDPSGKVH 117 (164)
T ss_dssp CSSEEEEECTTSCBC
T ss_pred cCCeEEEECCCCCEE
Confidence 466668889887754
No 124
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.25 E-value=3.5e-07 Score=69.01 Aligned_cols=82 Identities=12% Similarity=0.107 Sum_probs=52.9
Q ss_pred EEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHh-CCCEEEEEcCCCHHHHHHHHHHcCC---C
Q 027527 79 KVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGSVEQARTFSEQTKF---K 154 (222)
Q Consensus 79 ~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~-~gv~lvaIs~~s~~~i~~f~~~~~~---p 154 (222)
.+.+.+++.+.-.- .+.++.+|++|++.||++|++..+.|.++.+++.. .++.++.|..+....+ ++++++ |
T Consensus 8 ~v~~l~~~~~~~~~-~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~---~~~~~v~~~P 83 (133)
T 2dj3_A 8 PVKVVVGKTFDAIV-MDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDIT---NDQYKVEGFP 83 (133)
T ss_dssp SSEECCTTTCCCCC-TCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCC---CSSCCCSSSS
T ss_pred ceEEEcCCCHHHHh-ccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHH---HhhcCCCcCC
Confidence 34445554433222 12356788899999999999999999999998865 4588888877654222 223343 3
Q ss_pred CceeecCChH
Q 027527 155 GEVYADPNHS 164 (222)
Q Consensus 155 fpil~Dpd~~ 164 (222)
.-++.|.+..
T Consensus 84 t~~~~~~g~~ 93 (133)
T 2dj3_A 84 TIYFAPSGDK 93 (133)
T ss_dssp EEEEECTTCT
T ss_pred EEEEEeCCCc
Confidence 3356666543
No 125
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.24 E-value=6.5e-07 Score=67.16 Aligned_cols=43 Identities=7% Similarity=-0.049 Sum_probs=38.3
Q ss_pred EEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 100 vVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
+|+.|++.||++|++..+.|.++.+++.+.++.++.|..+...
T Consensus 25 vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~ 67 (126)
T 1x5e_A 25 WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQP 67 (126)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCH
T ss_pred EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCH
Confidence 7888899999999999999999999887778999999887553
No 126
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.24 E-value=9.6e-07 Score=65.61 Aligned_cols=68 Identities=9% Similarity=-0.016 Sum_probs=50.0
Q ss_pred CCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCC---CCceeecCChHHH
Q 027527 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF---KGEVYADPNHSSY 166 (222)
Q Consensus 95 ~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~---pfpil~Dpd~~ly 166 (222)
+.++.+|+.|++.||+.|++..+.+.++.+++.. ++.++.|..+.... +++++++ |.-++.|.++.+.
T Consensus 19 ~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~---~~~~~~v~~~Pt~~~~~~~~~~~ 89 (122)
T 3aps_A 19 QGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAYPQ---TCQKAGIKAYPSVKLYQYERAKK 89 (122)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHH---HHHHTTCCSSSEEEEEEEEGGGT
T ss_pred cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCCHH---HHHHcCCCccceEEEEeCCCccc
Confidence 3456788888999999999999999999888854 69999998876543 3334454 4336667666543
No 127
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.21 E-value=2.3e-06 Score=62.59 Aligned_cols=64 Identities=13% Similarity=-0.036 Sum_probs=45.0
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCC--HHHHHHHHHHcCCCCceeecCChH
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS--VEQARTFSEQTKFKGEVYADPNHS 164 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s--~~~i~~f~~~~~~pfpil~Dpd~~ 164 (222)
++.+|+.|++.||++|++..+.|.++.+++. ++.++.|..++ .+..++| .-.++|- ++.+++++
T Consensus 24 ~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~~~~~~~~~~-~v~~~Pt-~~~~~~G~ 89 (111)
T 2pu9_C 24 DKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL--DVIFLKLDCNQENKTLAKEL-GIRVVPT-FKILKENS 89 (111)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSTTHHHHHHH-CCSBSSE-EEEESSSS
T ss_pred CCEEEEEEECCcCHhHHHHCHHHHHHHHHCC--CeEEEEEecCcchHHHHHHc-CCCeeeE-EEEEeCCc
Confidence 4567888889999999999999999988875 59999998872 2333333 1223443 55666655
No 128
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.19 E-value=1.2e-06 Score=65.82 Aligned_cols=67 Identities=12% Similarity=0.054 Sum_probs=48.0
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHh---CCCEEEEEcCCCHH-HHHHHHHHcCCCCceeecCCh
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA---SGVALVLIGPGSVE-QARTFSEQTKFKGEVYADPNH 163 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~---~gv~lvaIs~~s~~-~i~~f~~~~~~pfpil~Dpd~ 163 (222)
.++.+|+.|++.||++|++..+.+.++.+++.+ .++.++.|..+... ..++| .-.++|--++.|+..
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~-~v~~~Pt~~~~~~g~ 94 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRY-GIRGFPTIKIFQKGE 94 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHH-TCCSSSEEEEEETTE
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhC-CCCeeCeEEEEeCCC
Confidence 456788889999999999999999999988863 56889999887543 23333 222445445666644
No 129
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.19 E-value=2.5e-07 Score=69.45 Aligned_cols=48 Identities=15% Similarity=0.087 Sum_probs=41.1
Q ss_pred CCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 95 ~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
+.++.+|++|++.||+.|++..+.|.++.+++...++.++.|..+...
T Consensus 31 ~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~ 78 (121)
T 2j23_A 31 GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQS 78 (121)
T ss_dssp SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCH
T ss_pred cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCH
Confidence 445678888889999999999999999988887778999999988653
No 130
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.18 E-value=4.2e-06 Score=63.22 Aligned_cols=43 Identities=19% Similarity=0.229 Sum_probs=37.0
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
++.+|++|++.||+.|++..+.|.++.+++. ++.++.|..+..
T Consensus 38 ~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~~ 80 (124)
T 1xfl_A 38 KTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDEL 80 (124)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTS
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECccC
Confidence 5678888899999999999999999988874 789999988754
No 131
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.17 E-value=1.4e-06 Score=62.54 Aligned_cols=47 Identities=9% Similarity=0.077 Sum_probs=38.5
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~ 143 (222)
.++.+|+.|++.||+.|++..+.+.++.+++.+. +.++.|..+....
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~ 64 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADILKLDVDENPS 64 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHH
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCcCHH
Confidence 3456777788999999999999999999988654 8999998876543
No 132
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.16 E-value=1.3e-06 Score=63.95 Aligned_cols=46 Identities=15% Similarity=0.166 Sum_probs=38.0
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
++.+|+.|++.||++|++..+.|.++.++++..++.++.|..+...
T Consensus 21 ~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~ 66 (112)
T 3d6i_A 21 DKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENS 66 (112)
T ss_dssp TCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCH
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCH
Confidence 5678888899999999999999999999876678999999987643
No 133
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.15 E-value=1.1e-06 Score=65.58 Aligned_cols=45 Identities=11% Similarity=0.093 Sum_probs=38.1
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
.++.+|+.|++.||++|++..+.|.++.+++.+ +.++.|..+...
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~~~ 74 (116)
T 3qfa_C 30 GDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDDCQ 74 (116)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTTTH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCH
Confidence 446788888999999999999999999888754 999999887653
No 134
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.15 E-value=6e-07 Score=64.74 Aligned_cols=47 Identities=15% Similarity=0.084 Sum_probs=38.2
Q ss_pred cCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 94 WKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 94 ~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
.+.++.+|++|++.||+.|++..+.+.++.+++.+ .+.++.|..+..
T Consensus 14 ~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~ 60 (105)
T 1nsw_A 14 IQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD-KVTVAKLNVDEN 60 (105)
T ss_dssp HSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-TCEEEEEETTTC
T ss_pred HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CcEEEEEECcCC
Confidence 34456778888899999999999999998888754 389999988754
No 135
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.14 E-value=3.5e-06 Score=61.29 Aligned_cols=45 Identities=16% Similarity=0.178 Sum_probs=38.1
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
++.+|++|++.||+.|++..+.|.++.+++.+ ++.++.|..+...
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~ 68 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDAVA 68 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTTH
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCchH
Confidence 45677888899999999999999999888754 7999999887643
No 136
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.11 E-value=5.9e-06 Score=60.77 Aligned_cols=45 Identities=18% Similarity=0.049 Sum_probs=37.8
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
.++.+|++|++.||+.|++..+.|.++.+++.+ ++.++.|..+..
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~~ 60 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDEN 60 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCCC
Confidence 345678888899999999999999999988864 699999988753
No 137
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.11 E-value=4.4e-06 Score=62.21 Aligned_cols=41 Identities=17% Similarity=0.079 Sum_probs=34.9
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~ 139 (222)
++.+|+.|++.||++|++..+.+.++.+++. ++.++.|..+
T Consensus 37 ~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~ 77 (124)
T 1faa_A 37 DKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCN 77 (124)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECS
T ss_pred CCEEEEEEECCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecC
Confidence 4566777789999999999999999888775 6899999887
No 138
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.10 E-value=2.6e-06 Score=62.11 Aligned_cols=45 Identities=20% Similarity=0.167 Sum_probs=37.8
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
.++.+|++|++.||++|++..+.|.++.+++.. .+.++.|..+..
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~ 66 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDEN 66 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCCC
Confidence 456678888899999999999999999888754 499999988754
No 139
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.09 E-value=2.5e-06 Score=63.10 Aligned_cols=81 Identities=14% Similarity=0.032 Sum_probs=53.6
Q ss_pred EecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHh----CCCEEEEEcCCCHHHHHHHHHHcCCCC
Q 027527 80 VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA----SGVALVLIGPGSVEQARTFSEQTKFKG 155 (222)
Q Consensus 80 L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~----~gv~lvaIs~~s~~~i~~f~~~~~~pf 155 (222)
+.+.+++.+...- ...++.+|+.|++.||++|++..+.|.++.+++.. .++.++.|..+..+ +.+ .-.++|-
T Consensus 9 v~~l~~~~f~~~v-~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~~Pt 84 (121)
T 2djj_A 9 VTVVVAKNYNEIV-LDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQGFPT 84 (121)
T ss_dssp SEECCTTTTTTSS-SCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSSSSE
T ss_pred eEEecccCHHHHh-hcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCcCCe
Confidence 4445555433221 23456788888999999999999999999999875 37889999887543 111 2223443
Q ss_pred ceeecCChH
Q 027527 156 EVYADPNHS 164 (222)
Q Consensus 156 pil~Dpd~~ 164 (222)
-++.|.+++
T Consensus 85 ~~~~~~~~~ 93 (121)
T 2djj_A 85 IKLYPAGAK 93 (121)
T ss_dssp EEEECSSCT
T ss_pred EEEEeCcCC
Confidence 366677654
No 140
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.09 E-value=4e-06 Score=60.46 Aligned_cols=46 Identities=13% Similarity=0.037 Sum_probs=37.9
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
.++.+|++|++.||+.|++..+.|.++.+++.+ .+.++.|..+...
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~ 63 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDESP 63 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCH
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCCCH
Confidence 356678888899999999999999998888754 4899999887543
No 141
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.08 E-value=1.1e-05 Score=57.10 Aligned_cols=45 Identities=11% Similarity=0.032 Sum_probs=37.6
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
.++.+|++|+..||+.|++..+.+.++.+++.+ +.++.|..+...
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~~~ 59 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDENP 59 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCH
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCCCH
Confidence 356778888899999999999999998888754 999999887543
No 142
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.08 E-value=2.4e-06 Score=61.13 Aligned_cols=45 Identities=18% Similarity=0.136 Sum_probs=37.6
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
.++.+|++|++.|||.|++..+.|.++.+++. ++.++.|..+...
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~ 62 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQNE 62 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCH
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccCCH
Confidence 34567777789999999999999999888774 7999999988653
No 143
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.08 E-value=4.3e-07 Score=67.52 Aligned_cols=68 Identities=15% Similarity=0.134 Sum_probs=43.6
Q ss_pred cCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 72 KNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 72 g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
++..+.+.+.+.+.-.-.+.+....++.+|++|++.||+.|++..+.|.++.+++.+ +.++.|..+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~ 76 (122)
T 2vlu_A 9 AVAAEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDEL 76 (122)
T ss_dssp ---CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTC
T ss_pred CCCCcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCCC
Confidence 444555665544321111211101345677778899999999999999998887754 99999988754
No 144
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.07 E-value=1.4e-06 Score=67.90 Aligned_cols=70 Identities=16% Similarity=0.086 Sum_probs=49.0
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC-Cc--eeecCChHHHHHcC
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GE--VYADPNHSSYEALS 170 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p-fp--il~Dpd~~lyk~lG 170 (222)
++.+|+.|++.||++|+...+.|.++.+++.. .+.++.|..+... ++++++++. +| ++.+....+...+|
T Consensus 23 ~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~~---~~~~~~~i~~~Pt~~~~~~G~~v~~~~g 95 (142)
T 1qgv_A 23 DRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITEVP---DFNKMYELYDPCTVMFFFRNKHIMIDLG 95 (142)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTCC---TTTTSSCSCSSCEEEEEETTEEEEEECC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccccCH---HHHHHcCCCCCCEEEEEECCcEEEEecC
Confidence 56788899999999999999999999988843 4889999887542 234444544 33 44454444443344
No 145
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=98.05 E-value=2.3e-06 Score=65.50 Aligned_cols=53 Identities=19% Similarity=0.225 Sum_probs=41.1
Q ss_pred EEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH------HHHHHHHHHcCCC
Q 027527 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV------EQARTFSEQTKFK 154 (222)
Q Consensus 99 vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~------~~i~~f~~~~~~p 154 (222)
.+|+.|++.||++|++..+.|.++.+++. +.++.|..++. +...+.++++++.
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~ 91 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIGERELSAARLEMNKAGVE 91 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCCHHHHHHHHHHHHHHTCC
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchhhhhhhhhHHHHHHcCCc
Confidence 68888899999999999999999888764 88888888543 3445555555654
No 146
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.05 E-value=1e-05 Score=60.80 Aligned_cols=65 Identities=8% Similarity=-0.131 Sum_probs=46.4
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHh----CCCEEEEEcCCCHHHHHHHHHHcCCC-Cc--eeecCCh
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA----SGVALVLIGPGSVEQARTFSEQTKFK-GE--VYADPNH 163 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~----~gv~lvaIs~~s~~~i~~f~~~~~~p-fp--il~Dpd~ 163 (222)
.++.+||.|++.||++|++..+.+.++.+++.. .++.++.|.++.... +++++++. +| ++.+...
T Consensus 32 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~---l~~~~~v~~~Pt~~~~~~g~ 103 (127)
T 3h79_A 32 PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPD---VIERMRVSGFPTMRYYTRID 103 (127)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHH---HHHHTTCCSSSEEEEECSSC
T ss_pred CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHh---HHHhcCCccCCEEEEEeCCC
Confidence 356788899999999999999999999888752 458888888875433 33444444 33 4555443
No 147
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.05 E-value=2.4e-06 Score=61.34 Aligned_cols=46 Identities=13% Similarity=0.184 Sum_probs=38.0
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~ 143 (222)
+++.+|+.|++.||+.|++..+.+.++.+++. ++.++.|..+....
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~ 64 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS--NVIFLEVDVDDCQD 64 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHST--TSEEEEEETTTCHH
T ss_pred CCCeEEEEEECCCChhhHHHHHHHHHHHHHcc--CeEEEEEEhhhhHH
Confidence 34667888889999999999999999988874 49999998876543
No 148
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=98.05 E-value=9.5e-07 Score=67.77 Aligned_cols=43 Identities=21% Similarity=0.228 Sum_probs=35.3
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
++.+|+.|++.||++|++..+.|.++.+++ ++.++.|..+...
T Consensus 40 ~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~~~ 82 (133)
T 3cxg_A 40 NSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDIHP 82 (133)
T ss_dssp CSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTTCH
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccchH
Confidence 457888899999999999999998877665 6888888877543
No 149
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.05 E-value=1.1e-05 Score=61.42 Aligned_cols=53 Identities=21% Similarity=0.226 Sum_probs=41.1
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p 154 (222)
++.+|++|++.||++|++..+.|.++.+++ .++.++.|..+... ++++++++.
T Consensus 46 ~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~v~~~~~~---~~~~~~~v~ 98 (139)
T 3d22_A 46 GKIVLANFSARWCGPSRQIAPYYIELSENY--PSLMFLVIDVDELS---DFSASWEIK 98 (139)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTSH---HHHHHTTCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCCEEEEEeCcccH---HHHHHcCCC
Confidence 456778888999999999999999998887 36999999887543 344444554
No 150
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.04 E-value=7.4e-06 Score=61.01 Aligned_cols=46 Identities=13% Similarity=0.068 Sum_probs=37.8
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
.++.+|++|++.||+.|++..+.|.++.+++.. ++.++.|..+...
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~~~ 75 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDDHT 75 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTTTH
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCCCH
Confidence 345677788899999999999999999888754 5999999887543
No 151
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.02 E-value=3.8e-06 Score=69.25 Aligned_cols=59 Identities=12% Similarity=0.166 Sum_probs=46.0
Q ss_pred ccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCC--CEEEEEcCCCHHHHHHHHHHcCCC
Q 027527 93 LWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASG--VALVLIGPGSVEQARTFSEQTKFK 154 (222)
Q Consensus 93 l~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~g--v~lvaIs~~s~~~i~~f~~~~~~p 154 (222)
+...++.++|.|++.||++|++..+.|.++.+++...+ +.++.|..+.... +++++++.
T Consensus 28 ~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~---l~~~~~v~ 88 (241)
T 3idv_A 28 FVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASV---LASRFDVS 88 (241)
T ss_dssp HHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHH---HHHHTTCC
T ss_pred HHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHH---HHHhcCCC
Confidence 34456788999999999999999999999999998766 8888888875433 34444543
No 152
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=98.02 E-value=1.4e-05 Score=60.19 Aligned_cols=66 Identities=15% Similarity=0.234 Sum_probs=47.9
Q ss_pred CeEEEEEEcCC-------CChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCCceeecCChHHHHHc
Q 027527 97 RKAVVAFARHF-------GCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNHSSYEAL 169 (222)
Q Consensus 97 ~~vvVvF~R~~-------~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~pfpil~Dpd~~lyk~l 169 (222)
++.+|+.|++. ||++|++..+.|.++.+++.+ ++.++.|..++... +.|++..+.+.|
T Consensus 24 ~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~--------------~~d~~~~~~~~~ 88 (123)
T 1wou_A 24 GKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGEKPY--------------WKDPNNDFRKNL 88 (123)
T ss_dssp TSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCCHHH--------------HHCTTCHHHHHH
T ss_pred CCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCCchh--------------hhchhHHHHHHC
Confidence 46788888999 999999999999998887743 78999998875321 125555566666
Q ss_pred CCccccce
Q 027527 170 SFVSGVLV 177 (222)
Q Consensus 170 Gl~~~~~~ 177 (222)
++...+..
T Consensus 89 ~i~~~Pt~ 96 (123)
T 1wou_A 89 KVTAVPTL 96 (123)
T ss_dssp CCCSSSEE
T ss_pred CCCeeCEE
Confidence 66555443
No 153
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.01 E-value=5.6e-06 Score=60.17 Aligned_cols=60 Identities=12% Similarity=0.182 Sum_probs=44.2
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHH-HHHHHHcCCCCceee
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA-RTFSEQTKFKGEVYA 159 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i-~~f~~~~~~pfpil~ 159 (222)
++.+|++|++.||+.|++..+.|.++.+++. ++.++.|..+....+ ++| .-.++|.-++.
T Consensus 26 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~~~~~~~-~v~~~Pt~~~~ 86 (113)
T 1ti3_A 26 QKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDELKAVAEEW-NVEAMPTFIFL 86 (113)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTCHHHHHHH-HCSSTTEEEEE
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEccccHHHHHhC-CCCcccEEEEE
Confidence 5678888899999999999999999888774 799999988765433 334 33355533333
No 154
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.01 E-value=7.4e-06 Score=58.80 Aligned_cols=45 Identities=11% Similarity=0.025 Sum_probs=37.7
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
.++.+|++|++.||+.|++..+.|.++.+++.. ++.++.|..+..
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~ 63 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDDN 63 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTTC
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCCC
Confidence 456677888899999999999999999888864 689999988754
No 155
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.01 E-value=2.3e-06 Score=61.48 Aligned_cols=46 Identities=13% Similarity=0.087 Sum_probs=37.8
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
.++.+|++|+..||+.|++..+.|.++.+++.+ ++.++.|..+...
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~ 62 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDENP 62 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCH
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCCCH
Confidence 345677788899999999999999999888754 5899999887543
No 156
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.01 E-value=8.2e-06 Score=63.73 Aligned_cols=65 Identities=12% Similarity=0.118 Sum_probs=45.8
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCCceeecCChH
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNHS 164 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~pfpil~Dpd~~ 164 (222)
++.+|++|++.||++|++..+.|.++.+++ .++.++.|..+....+.+-..-.++|.-++.| +++
T Consensus 32 ~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~-~G~ 96 (153)
T 2wz9_A 32 KSLLVVHFWAPWAPQCAQMNEVMAELAKEL--PQVSFVKLEAEGVPEVSEKYEISSVPTFLFFK-NSQ 96 (153)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTSHHHHHHTTCCSSSEEEEEE-TTE
T ss_pred CCeEEEEEECCCCHhHHHHHHHHHHHHHHc--CCeEEEEEECCCCHHHHHHcCCCCCCEEEEEE-CCE
Confidence 567788889999999999999999988876 47999999988654332211222344445666 443
No 157
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.00 E-value=8e-06 Score=59.36 Aligned_cols=46 Identities=9% Similarity=0.151 Sum_probs=38.3
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
.++.+|++|+..||+.|++..+.|.++.+++.+. +.++.|..+...
T Consensus 24 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~~~ 69 (115)
T 1thx_A 24 AEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR-LKVVKLEIDPNP 69 (115)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEESTTCH
T ss_pred CCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc-EEEEEEEcCCCH
Confidence 4567788888999999999999999998887643 999999887543
No 158
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.98 E-value=2.1e-06 Score=65.66 Aligned_cols=53 Identities=13% Similarity=0.019 Sum_probs=42.6
Q ss_pred eEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCC
Q 027527 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (222)
Q Consensus 98 ~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~ 153 (222)
+.+|+.|++.||++|++..+.|.++.+++...++.++.|..+.... +++++++
T Consensus 27 ~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~---~~~~~~v 79 (137)
T 2dj0_A 27 VTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTD---VSTRYKV 79 (137)
T ss_dssp SCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHH---HHHHTTC
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHH---HHHHccC
Confidence 4788899999999999999999999999876689999998875433 3344454
No 159
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=97.97 E-value=1.8e-05 Score=58.51 Aligned_cols=56 Identities=16% Similarity=0.267 Sum_probs=41.2
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH---HHHHHHHHHcCCC
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV---EQARTFSEQTKFK 154 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~---~~i~~f~~~~~~p 154 (222)
.++.+|++|++.|||+|++..+.|.++.+++. ..++.|..+.. +...++++++++.
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~i~ 86 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAETK---AHIYFINSEEPSQLNDLQAFRSRYGIP 86 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHC---CCCEEEETTCGGGHHHHHHHHHHHTCC
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhcC---CeEEEEECCCcCcHHHHHHHHHHcCCC
Confidence 34568888999999999999999999887653 45556655432 4556677777765
No 160
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.97 E-value=6.7e-06 Score=59.09 Aligned_cols=47 Identities=9% Similarity=0.065 Sum_probs=38.9
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~ 143 (222)
.++.+|+.|++.||+.|+...+.+.++.+++.+ .+.++.|..+....
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~ 66 (109)
T 3tco_A 20 NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVDENQK 66 (109)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCHH
T ss_pred cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccccCHH
Confidence 456788888999999999999999999988854 58888888875543
No 161
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.97 E-value=3.7e-06 Score=62.63 Aligned_cols=44 Identities=14% Similarity=0.051 Sum_probs=37.2
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
.++.+|++|++.||+.|++..+.|.++.+++.+ +.++.|..+..
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~~ 72 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDES 72 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCC
Confidence 356788888899999999999999998888754 99999988754
No 162
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=97.97 E-value=5.4e-06 Score=60.16 Aligned_cols=44 Identities=11% Similarity=0.156 Sum_probs=37.5
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
.++.+|+.|++.||++|++..+.+.++.+++ .++.++.|..+..
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~~vd~~~~ 63 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY--PQAVFLEVDVHQC 63 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTS
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHC--CCcEEEEEECccC
Confidence 4566788889999999999999999998887 4699999988754
No 163
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=97.97 E-value=6.3e-06 Score=60.51 Aligned_cols=45 Identities=11% Similarity=0.171 Sum_probs=38.1
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
.++.+|++|++.||+.|++..+.|.++.+++. ++.++.|..+...
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~~~ 69 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDEVS 69 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTTH
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCCCH
Confidence 45678888889999999999999999988774 6999999888654
No 164
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=97.96 E-value=8.6e-06 Score=58.80 Aligned_cols=46 Identities=15% Similarity=0.104 Sum_probs=37.8
Q ss_pred CCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 95 ~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
+.++.+|++|++.||+.|++..+.|.++.+++.. .+.++.|..+..
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~ 63 (108)
T 2trx_A 18 KADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN 63 (108)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTC
T ss_pred hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCCC
Confidence 3456788888999999999999999998888754 488888887754
No 165
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=97.96 E-value=1e-05 Score=61.51 Aligned_cols=46 Identities=13% Similarity=0.025 Sum_probs=38.3
Q ss_pred CCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 95 ~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
+.++.+|++|++.||+.|++..+.|.++.+++.+ ++.++.|..+..
T Consensus 38 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~~ 83 (128)
T 2o8v_B 38 KADGAILVDFWAEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQN 83 (128)
T ss_dssp TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTTC
T ss_pred hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCC
Confidence 3456788899999999999999999999888754 488898887753
No 166
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=97.96 E-value=6.7e-06 Score=59.55 Aligned_cols=46 Identities=13% Similarity=0.242 Sum_probs=38.4
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
.++.+|+.|++.||+.|+...+.+.++.+++.+ .+.++.|..+...
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~~ 66 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEEEK 66 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCH
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCcCh
Confidence 456778888899999999999999999888754 5999999887654
No 167
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.96 E-value=3.6e-06 Score=60.85 Aligned_cols=46 Identities=11% Similarity=-0.003 Sum_probs=37.4
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHHHhHHHHHh--CCCEEEEEcCCCHH
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGSVE 142 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~--~gv~lvaIs~~s~~ 142 (222)
++.+|+.|++.||++|++..+.+.++.+++.+ .++.++.|..+...
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~ 68 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAER 68 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCH
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccH
Confidence 35678888999999999999999999887654 37888888887553
No 168
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=97.20 E-value=1.1e-06 Score=62.78 Aligned_cols=46 Identities=20% Similarity=0.156 Sum_probs=36.4
Q ss_pred CCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 95 ~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
+.++.+|++|+..|||.|++..+.+.++.+++.. ++.++.|..+..
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~ 62 (106)
T 2yj7_A 17 KSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDEN 62 (106)
Confidence 3456678888899999999999999998888754 577777777644
No 169
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=97.95 E-value=1.3e-05 Score=63.43 Aligned_cols=48 Identities=21% Similarity=0.257 Sum_probs=36.0
Q ss_pred CCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEE
Q 027527 85 GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (222)
Q Consensus 85 G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaI 136 (222)
+..+.+++. +.+++|+.|+.+|||+|++..+.|.++.++..+ ++++.+
T Consensus 12 ~~~~~~G~~--~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~ 59 (175)
T 3gyk_A 12 PNAPVLGNP--EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN--VRLVYR 59 (175)
T ss_dssp TTSCEEECT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEE
T ss_pred CCCCCcCCC--CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC--EEEEEE
Confidence 444556663 568899999999999999999999988876543 454444
No 170
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=97.94 E-value=1.1e-06 Score=69.52 Aligned_cols=49 Identities=18% Similarity=0.140 Sum_probs=39.9
Q ss_pred CccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 92 DLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 92 dl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
++.+.++.+|+.|++.||++|+...+.|.++.+++.. .+.++.|..+..
T Consensus 59 ~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~~~~ 107 (155)
T 2ppt_A 59 RAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG-QVRLAKIDTQAH 107 (155)
T ss_dssp HHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTS
T ss_pred HHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC-CEEEEEEeCCcc
Confidence 3334456778888899999999999999999998864 499999988754
No 171
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.94 E-value=7.2e-06 Score=58.76 Aligned_cols=46 Identities=17% Similarity=0.131 Sum_probs=38.1
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
.++.+|+.|++.||+.|++..+.|.++.+++. .++.++.|..+...
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~v~~~~~~ 64 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFA-DNVVVLKVDVDECE 64 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-TTEEEEEEETTTCH
T ss_pred CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhC-CCeEEEEEeccchH
Confidence 34677888889999999999999999888875 57899999887543
No 172
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=97.93 E-value=7.4e-06 Score=58.60 Aligned_cols=45 Identities=11% Similarity=0.076 Sum_probs=36.9
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
.++.+|++|++.||+.|++..+.+.++.+++.+ .+.++.|..++.
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~ 61 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDEA 61 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcch
Confidence 345677788899999999999999998888754 488888888754
No 173
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=97.91 E-value=6.2e-06 Score=60.40 Aligned_cols=43 Identities=19% Similarity=0.183 Sum_probs=36.8
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
++.+|++|+..||+.|++..+.|.++.+++. ++.++.|..+..
T Consensus 28 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~ 70 (118)
T 2vm1_A 28 GKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDEL 70 (118)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTS
T ss_pred CCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEcccC
Confidence 4567888889999999999999999988875 799999988754
No 174
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=97.91 E-value=9.7e-06 Score=60.70 Aligned_cols=67 Identities=6% Similarity=0.060 Sum_probs=44.3
Q ss_pred CeEEEEEEcCCCChhHHHHHHHH---HHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCC---CCceeecCChHH
Q 027527 97 RKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF---KGEVYADPNHSS 165 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L---~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~---pfpil~Dpd~~l 165 (222)
++.+|+.|++.||+.|++..+.+ .++.+.+ ..++.++.|..+.. ....+++++++ |.-++.|+++++
T Consensus 27 ~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~~~~vd~~~~-~~~~~~~~~~v~~~Pt~~~~d~~G~~ 99 (130)
T 2kuc_A 27 DKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYF-NRHFVNLKMDMEKG-EGVELRKKYGVHAYPTLLFINSSGEV 99 (130)
T ss_dssp SSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHH-HHHSEEEEECSSST-THHHHHHHTTCCSSCEEEEECTTSCE
T ss_pred CCeEEEEEECCCCccHHHHHHHhcCcHHHHHHH-hcCeEEEEEecCCc-chHHHHHHcCCCCCCEEEEECCCCcE
Confidence 45678888899999999999988 4444443 34577888887741 12334444454 444677877654
No 175
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=97.90 E-value=9.3e-06 Score=62.37 Aligned_cols=46 Identities=15% Similarity=0.247 Sum_probs=38.9
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
.++.+|+.|++.||+.|++..+.|.++.+++.+ .+.++.|..+...
T Consensus 23 ~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~ 68 (140)
T 3hz4_A 23 SKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS-SAVFGRINIATNP 68 (140)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTCH
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC-ceEEEEEECCcCH
Confidence 456778888999999999999999999988865 4999999887654
No 176
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=97.90 E-value=2e-05 Score=65.98 Aligned_cols=66 Identities=12% Similarity=-0.007 Sum_probs=48.9
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHh--CCCEEEEEcCCCHHHHHHHHHHcCCC-Cc--eeecCC
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGSVEQARTFSEQTKFK-GE--VYADPN 162 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~--~gv~lvaIs~~s~~~i~~f~~~~~~p-fp--il~Dpd 162 (222)
.++.+|+.|++.||++|++..+.+.++.+++.+ .++.++.|.++.. ...+.++++++. +| ++.++.
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~-~~~~l~~~~~v~~~Pt~~~~~~g 99 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEE-TNSAVCRDFNIPGFPTVRFFXAF 99 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTST-TTHHHHHHTTCCSSSEEEEECTT
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCch-hhHHHHHHcCCCccCEEEEEeCC
Confidence 347888999999999999999999999999876 5799999998431 223445555544 33 566654
No 177
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=97.89 E-value=1.3e-05 Score=60.87 Aligned_cols=46 Identities=11% Similarity=0.128 Sum_probs=38.5
Q ss_pred CCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 95 ~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
+.++.+|++|++.||+.|++..+.|.++.+++ .++.++.|..+...
T Consensus 35 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~~v~~~~vd~d~~~ 80 (125)
T 1r26_A 35 SEDILTVAWFTAVWCGPCKTIERPMEKIAYEF--PTVKFAKVDADNNS 80 (125)
T ss_dssp HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHC--TTSEEEEEETTTCH
T ss_pred ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHC--CCCEEEEEECCCCH
Confidence 34567788888999999999999999988887 36999999987543
No 178
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=97.88 E-value=1.2e-05 Score=59.25 Aligned_cols=45 Identities=13% Similarity=0.095 Sum_probs=37.4
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
.++.+|++|++.||+.|++..+.|.++.+++.. ++.++.|..+..
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~ 73 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDTN 73 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCCC
Confidence 345678888899999999999999998888754 589999988754
No 179
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=97.88 E-value=6.6e-06 Score=60.77 Aligned_cols=44 Identities=18% Similarity=0.171 Sum_probs=36.9
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
.++.+|++|++.||++|++..+.+.++.+++ ++.++.|..+...
T Consensus 32 ~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~~~ 75 (117)
T 2xc2_A 32 KNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDKLE 75 (117)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTTSH
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCccH
Confidence 3566788888999999999999999888776 7999999887543
No 180
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=97.87 E-value=2.3e-05 Score=58.18 Aligned_cols=43 Identities=21% Similarity=0.175 Sum_probs=35.4
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
++.+|+.|++.||++|+...+.+.++.+++. ++.++.|..+..
T Consensus 20 ~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~d~~ 62 (105)
T 3zzx_A 20 NKLVVIDFYATWCGPCKMIAPKLEELSQSMS--DVVFLKVDVDEC 62 (105)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TEEEEEEETTTC
T ss_pred CCEEEEEEECCCCCCccCCCcchhhhhhccC--CeEEEEEecccC
Confidence 4688999999999999999999998887663 577787877644
No 181
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.85 E-value=5.1e-06 Score=70.90 Aligned_cols=45 Identities=9% Similarity=0.062 Sum_probs=38.9
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
++.|||.||+.||++|+...+.+.++.+++.+ .+.++.|..+...
T Consensus 26 ~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~~ 70 (287)
T 3qou_A 26 TTPVLFYFWSERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAEQ 70 (287)
T ss_dssp TSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTTCH
T ss_pred CCeEEEEEECCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCccCH
Confidence 57788999999999999999999999988863 4999999988643
No 182
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=97.82 E-value=1.5e-05 Score=60.80 Aligned_cols=45 Identities=11% Similarity=-0.013 Sum_probs=37.8
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
.++ +|++|++.||+.|++..+.|.++.+++.. ++.++.|..+...
T Consensus 50 ~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~ 94 (140)
T 1v98_A 50 APL-TLVDFFAPWCGPCRLVSPILEELARDHAG-RLKVVKVNVDEHP 94 (140)
T ss_dssp CCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCH
T ss_pred CCC-EEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCCCH
Confidence 445 88888999999999999999999888854 5899999887543
No 183
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=96.99 E-value=3.1e-06 Score=63.62 Aligned_cols=77 Identities=9% Similarity=0.253 Sum_probs=49.4
Q ss_pred CCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHH---HHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHc---CCCCcee
Q 027527 85 GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSVEQARTFSEQT---KFKGEVY 158 (222)
Q Consensus 85 G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L---~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~---~~pfpil 158 (222)
.+.+.+... .++.+|++|++.||++|++..+.+ .++.+.+.. ++.++.|..++. ...++++++ ++|.-++
T Consensus 9 ~~~~~~~~~--~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-~~~~~~~~~~v~~~Pt~~~ 84 (130)
T 2lst_A 9 PEALALAQA--HGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTP-EGQELARRYRVPGTPTFVF 84 (130)
Confidence 455556553 456788888999999999999888 666665543 577777777432 222233333 4555577
Q ss_pred ecCC-hHH
Q 027527 159 ADPN-HSS 165 (222)
Q Consensus 159 ~Dpd-~~l 165 (222)
.|++ +++
T Consensus 85 ~d~~~G~~ 92 (130)
T 2lst_A 85 LVPKAGAW 92 (130)
Confidence 7764 543
No 184
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.78 E-value=1.5e-05 Score=55.00 Aligned_cols=52 Identities=8% Similarity=0.041 Sum_probs=39.1
Q ss_pred EEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 027527 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (222)
Q Consensus 99 vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p 154 (222)
+.|+.|++.|||+|++..+.|.++.+++. .++.++.|..+... +.++++++.
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~vd~~~~~---~~~~~~~v~ 54 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFG-DKIDVEKIDIMVDR---EKAIEYGLM 54 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHC-SSCCEEEECTTTCG---GGGGGTCSS
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhc-CCeEEEEEECCCCH---HHHHhCCce
Confidence 35788899999999999999999888875 36888888886432 233444544
No 185
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=97.76 E-value=3e-05 Score=63.30 Aligned_cols=70 Identities=10% Similarity=0.148 Sum_probs=47.5
Q ss_pred CeEEEEEEcCCCChhHHHHHHHH---HHhHHHHHhCCCEEEEEcCCCH-HHHHHHH-------HHcCCCCceeecCChHH
Q 027527 97 RKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSV-EQARTFS-------EQTKFKGEVYADPNHSS 165 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L---~~~~~~l~~~gv~lvaIs~~s~-~~i~~f~-------~~~~~pfpil~Dpd~~l 165 (222)
++.|++.|++.||+.|+...+.. .+..+.+.+ ++.++-|..+.. +..+.|. ...++|.-++.|++++.
T Consensus 39 ~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~Pt~v~l~~dG~~ 117 (173)
T 3ira_A 39 NKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNIIMTPGKKP 117 (173)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETTTCHHHHHHHHHHHHHHHSCCCSSEEEEECTTSCE
T ss_pred CCCEEEecccchhHhhccccccccCCHHHHHHHHh-cCceeeeCCcccCcHHHHHHHHHHHHcCCCCCcceeeECCCCCc
Confidence 46678888999999999966632 233334433 577888887744 4445553 34578888999999876
Q ss_pred HH
Q 027527 166 YE 167 (222)
Q Consensus 166 yk 167 (222)
..
T Consensus 118 v~ 119 (173)
T 3ira_A 118 FF 119 (173)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 186
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=97.75 E-value=6.9e-06 Score=68.22 Aligned_cols=47 Identities=15% Similarity=0.107 Sum_probs=39.2
Q ss_pred CCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHH
Q 027527 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (222)
Q Consensus 95 ~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~ 142 (222)
+.++.+|+.|++.||++|+...+.|.++.+++.+. +.++.|..+...
T Consensus 28 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~~~ 74 (222)
T 3dxb_A 28 KADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQNP 74 (222)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCT
T ss_pred hcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCCCH
Confidence 34567888889999999999999999999988643 899999887543
No 187
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.73 E-value=1.6e-05 Score=54.78 Aligned_cols=43 Identities=14% Similarity=0.136 Sum_probs=35.8
Q ss_pred eEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 98 ~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
.+.|++|++.|||+|++..+.|.++.+++. .++.++.|..++.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~vd~~~~ 45 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMP-DAVEVEYINVMEN 45 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCS-SSEEEEEEESSSS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcC-CceEEEEEECCCC
Confidence 367888899999999999999999888774 4688888888653
No 188
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.71 E-value=1.3e-05 Score=58.91 Aligned_cols=44 Identities=14% Similarity=0.165 Sum_probs=35.1
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
.++.+|++|++.||++|++..+.|.++.+++. ++.++.|..+..
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~~ 61 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEAR 61 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGGC
T ss_pred cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcCC
Confidence 34567788899999999999999988877764 688888877643
No 189
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=97.69 E-value=8.3e-05 Score=70.17 Aligned_cols=66 Identities=6% Similarity=-0.072 Sum_probs=49.9
Q ss_pred CCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHh--CCCEEEEEcCCCHHHHHHHHHHcCCC-Cc--eeecC
Q 027527 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGSVEQARTFSEQTKFK-GE--VYADP 161 (222)
Q Consensus 95 ~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~--~gv~lvaIs~~s~~~i~~f~~~~~~p-fp--il~Dp 161 (222)
+.++.+||.|++.||++|+++++.+.++++++.+ .++.++.|.++.. ...+.++++++. +| ++.|+
T Consensus 28 ~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d-~~~~l~~~~~V~~~PTl~~f~~ 98 (519)
T 3t58_A 28 GSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEE-TNSAVCREFNIAGFPTVRFFQA 98 (519)
T ss_dssp SCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSG-GGHHHHHHTTCCSBSEEEEECT
T ss_pred hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCcc-ccHHHHHHcCCcccCEEEEEcC
Confidence 3457899999999999999999999999999975 4789999988642 233455555654 34 56665
No 190
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=97.67 E-value=5.3e-05 Score=66.21 Aligned_cols=73 Identities=8% Similarity=0.054 Sum_probs=49.0
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC-Cc--eeecCChHHHHHcC
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GE--VYADPNHSSYEALS 170 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p-fp--il~Dpd~~lyk~lG 170 (222)
.++.+||.|++.||++|+..++.+.++.+++.+. +.++.|.++..+ -.++++++++. +| ++.+....++..-|
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d~~~-~~~l~~~~~I~~~Pt~~~~~~g~~v~~~~g 109 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCDLNK-NKALCAKYDVNGFPTLMVFRPPKIDLSKPI 109 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTSTT-THHHHHHTTCCBSSEEEEEECCCC------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEccCcc-CHHHHHhCCCCccceEEEEECCceeecccc
Confidence 3567888899999999999999999999988653 889999887321 23455555654 34 55566554444333
No 191
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.65 E-value=6.3e-05 Score=61.63 Aligned_cols=55 Identities=11% Similarity=0.076 Sum_probs=42.4
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p 154 (222)
.++.+||.|++.||++|++..+.+.++.+++.. .+.++.|..+.... +++++++.
T Consensus 113 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~~~~---l~~~~~v~ 167 (210)
T 3apq_A 113 SGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGDDRM---LCRMKGVN 167 (210)
T ss_dssp HSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCHH---HHHHTTCC
T ss_pred cCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCccHH---HHHHcCCC
Confidence 456788889999999999999999999888854 48999998876533 33444443
No 192
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=97.60 E-value=7.3e-05 Score=61.20 Aligned_cols=46 Identities=7% Similarity=-0.041 Sum_probs=38.4
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHh---CCCEEEEEcCCCH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA---SGVALVLIGPGSV 141 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~---~gv~lvaIs~~s~ 141 (222)
+++++|+.|++.||++|++..+.+.++..++.+ .++.++.|..+..
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~ 181 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEY 181 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGC
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccC
Confidence 456768899999999999999999999988874 4788888877643
No 193
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.60 E-value=8.7e-05 Score=61.56 Aligned_cols=86 Identities=14% Similarity=0.128 Sum_probs=55.9
Q ss_pred EeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcC-----CCH---------------HHHHHH
Q 027527 88 IPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP-----GSV---------------EQARTF 147 (222)
Q Consensus 88 v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~-----~s~---------------~~i~~f 147 (222)
+.++.. +.+++|+.|+.+|||+|++..+.|.++.+ .+++++.+.. ++. ....++
T Consensus 79 ~~~g~~--~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~----~~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~ 152 (216)
T 1eej_A 79 IVYKAP--QEKHVITVFTDITCGYCHKLHEQMADYNA----LGITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDV 152 (216)
T ss_dssp EEECCT--TCCEEEEEEECTTCHHHHHHHTTHHHHHH----TTEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHH
T ss_pred eeecCC--CCCEEEEEEECCCCHHHHHHHHHHHHHHh----CCcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHH
Confidence 444442 45788889999999999999999887654 3778776532 111 112222
Q ss_pred HHHcCCCC---ceeecCChHHHHHcCCccccceee
Q 027527 148 SEQTKFKG---EVYADPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 148 ~~~~~~pf---pil~Dpd~~lyk~lGl~~~~~~~~ 179 (222)
....++++ ....|.+.++.+.+|+..++...+
T Consensus 153 ~~~~~~~~~~~~~~v~~~~~l~~~~gV~gtPt~v~ 187 (216)
T 1eej_A 153 MAGKSVAPASCDVDIADHYALGVQLGVSGTPAVVL 187 (216)
T ss_dssp HTTCCCCCCCCSCCHHHHHHHHHHHTCCSSSEEEC
T ss_pred HhCCCCChhHHHHHHHHHHHHHHHcCCCccCEEEE
Confidence 23333432 345577788999999988877655
No 194
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=97.54 E-value=7.3e-05 Score=59.50 Aligned_cols=99 Identities=11% Similarity=0.189 Sum_probs=55.5
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHHHhHH--HHHhCCCEEEEEcCCCHHHHHHHHHHcCCCCceeecCChHH-HHHcCCcc
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLAAKKD--VMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNHSS-YEALSFVS 173 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~~~~~--~l~~~gv~lvaIs~~s~~~i~~f~~~~~~pfpil~Dpd~~l-yk~lGl~~ 173 (222)
++.|+|.|++.||++|+...+.+.+..+ ++.+.++..|-|..++.+....| .-.++|--++.|++++. ++..|...
T Consensus 44 ~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~-~v~~~PT~~f~~~~G~~v~~~~G~~~ 122 (151)
T 3ph9_A 44 KKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSP-DGQYVPRIMFVDPSLTVRADIAGRYS 122 (151)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCT-TCCCSSEEEEECTTSCBCTTCCCSCT
T ss_pred CCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhc-CCCCCCEEEEECCCCCEEEEEeCCcC
Confidence 4567888899999999999998887522 22233555555543332222222 12345555888976654 55556544
Q ss_pred ccceeeccchhHHHHHHHHHHHHhhhc
Q 027527 174 GVLVTFTPKAGLKIIQSYMEGYRQDWK 200 (222)
Q Consensus 174 ~~~~~~~P~a~~~~l~~~~~g~r~~~k 200 (222)
.....+.+.... .++..++++++
T Consensus 123 ~~~~~~~~~~~~----~ll~~~~~al~ 145 (151)
T 3ph9_A 123 NRLYTYEPRDLP----LLIENMKKALR 145 (151)
T ss_dssp TSTTCCCGGGHH----HHHHHHHHHHS
T ss_pred CcccccchhhHH----HHHHHHHHHHH
Confidence 433333333333 33355555554
No 195
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.52 E-value=0.00018 Score=57.92 Aligned_cols=43 Identities=14% Similarity=0.080 Sum_probs=34.3
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~ 139 (222)
+.+++|+.|+.+|||+|++..+.|.++.+++.+ ++.++-+...
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 467888888999999999999999888887754 5666666553
No 196
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=97.51 E-value=5.1e-05 Score=61.48 Aligned_cols=100 Identities=15% Similarity=0.079 Sum_probs=59.9
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC-Cc---eeecCChHHHHHcCC
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GE---VYADPNHSSYEALSF 171 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p-fp---il~Dpd~~lyk~lGl 171 (222)
..++|||.||+.||++|+...+-|.++.+++.. .+.++-|..|.. .++++++++. .| ++-|-+ .+.-.+|-
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~-~v~f~kVDVDe~---~e~a~~y~V~siPT~~fFk~G~-~v~vd~Gt 114 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKN-FCVIYLVDITEV---PDFNTMYELYDPVSVMFFYRNK-HMMIDLGT 114 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC---CTTTTTTTCCSSEEEEEEETTE-EEEEECSS
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccC-CcEEEEEECCCC---HHHHHHcCCCCCCEEEEEECCE-EEEEecCC
Confidence 456799999999999999999999999998743 377888877744 3344555544 23 233322 21112332
Q ss_pred ccc-cceeecc-c-hhHHHHHHHHHHHHhhhc
Q 027527 172 VSG-VLVTFTP-K-AGLKIIQSYMEGYRQDWK 200 (222)
Q Consensus 172 ~~~-~~~~~~P-~-a~~~~l~~~~~g~r~~~k 200 (222)
... -.....| + .+...+..+.+|.|+++.
T Consensus 115 gd~~k~vGa~~~k~~l~~~ie~~~r~a~~g~~ 146 (160)
T 2av4_A 115 GNNNKINWPMNNKQEFIDIVETIFRGARKGRG 146 (160)
T ss_dssp SCCSCBCSCCCCHHHHHHHHHHHHHHHHTTCS
T ss_pred CCcCeEEeecCCHHHHHHHHHHHHHHhhcCCe
Confidence 111 1112223 3 355667777777666554
No 197
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.48 E-value=0.00018 Score=55.05 Aligned_cols=42 Identities=14% Similarity=0.008 Sum_probs=36.0
Q ss_pred eEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 98 ~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
+.+|+.|++.||++|+...+.|.++.+++ .++.++.|..+..
T Consensus 31 ~~vvv~f~a~wC~~C~~~~p~l~~la~~~--~~v~~~~vd~~~~ 72 (135)
T 2dbc_A 31 LWVVIHLYRSSVPMCLVVNQHLSVLARKF--PETKFVKAIVNSC 72 (135)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHC--SSEEEEEECCSSS
T ss_pred CEEEEEEECCCChHHHHHHHHHHHHHHHC--CCcEEEEEEhhcC
Confidence 57889999999999999999999988876 3688888887754
No 198
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=97.48 E-value=0.00016 Score=67.75 Aligned_cols=62 Identities=13% Similarity=0.192 Sum_probs=46.1
Q ss_pred eEEEEEEcCCCChhHHHHHHHHHHhHHHHHhC-C------CEEEEEcCCCHHHHHHHHHHcCC---CCceeecCC
Q 027527 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-G------VALVLIGPGSVEQARTFSEQTKF---KGEVYADPN 162 (222)
Q Consensus 98 ~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~-g------v~lvaIs~~s~~~i~~f~~~~~~---pfpil~Dpd 162 (222)
+++||.|++.||++|++..+.+.++.+++.+. | +.++.|..+... +.++++++ |--++.++.
T Consensus 43 k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~---~la~~y~V~~~PTlilf~~g 114 (470)
T 3qcp_A 43 CPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEV---DLCRKYDINFVPRLFFFYPR 114 (470)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCH---HHHHHTTCCSSCEEEEEEES
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCH---HHHHHcCCCccCeEEEEECC
Confidence 57889999999999999999999999988643 3 899999988653 34444454 433555543
No 199
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=97.46 E-value=8.3e-06 Score=60.83 Aligned_cols=43 Identities=19% Similarity=0.188 Sum_probs=36.4
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
++.+|++|+..||+.|++..+.|.++.+++. ++.++.|..+..
T Consensus 36 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~ 78 (130)
T 1wmj_A 36 GKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDEL 78 (130)
T ss_dssp TCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTTS
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccch
Confidence 4567888889999999999999999888875 688888888754
No 200
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=97.46 E-value=0.00025 Score=48.00 Aligned_cols=36 Identities=11% Similarity=0.088 Sum_probs=28.2
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEc
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs 137 (222)
.+.|++.||++|++..+.|.++.+++. ..+.++.|.
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~-~~~~~~~v~ 38 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELG-IDAEFEKIK 38 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTT-CCEEEEEEC
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcC-CceEEEEec
Confidence 466778899999999999999887764 346666665
No 201
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.39 E-value=4.4e-05 Score=55.52 Aligned_cols=45 Identities=16% Similarity=0.129 Sum_probs=37.0
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhC--CCEEEEEcCCC
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS--GVALVLIGPGS 140 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~--gv~lvaIs~~s 140 (222)
.++.+|++|++.||+.|++..+.+.++.+++.+. ++.++.|..+.
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~ 69 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE 69 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC
Confidence 4567888889999999999999999999888753 57777777664
No 202
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=97.36 E-value=5.7e-05 Score=56.12 Aligned_cols=30 Identities=13% Similarity=0.266 Sum_probs=25.0
Q ss_pred eEEEEEEcCCCChhHHHHHHHHHHhHHHHH
Q 027527 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMD 127 (222)
Q Consensus 98 ~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~ 127 (222)
+.+||.|++.|||+|++..+.|.++.+++.
T Consensus 13 k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~ 42 (106)
T 3kp8_A 13 QIGGTMYGAYWCPHCQDQKELFGAAFDQVP 42 (106)
T ss_dssp HHTCEEEECTTCHHHHHHHHHHGGGGGGSC
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHhCC
Confidence 456778899999999999999998876653
No 203
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.32 E-value=0.00039 Score=55.83 Aligned_cols=40 Identities=20% Similarity=0.253 Sum_probs=32.1
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEE
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaI 136 (222)
+.+++|+.|+.+|||+|++..+.|.++.+++.+ ++.+.-+
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~ 63 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFVRL 63 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEE
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEEEE
Confidence 567889999999999999999999888777654 5555544
No 204
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=97.32 E-value=0.00017 Score=66.55 Aligned_cols=60 Identities=12% Similarity=0.074 Sum_probs=48.2
Q ss_pred cCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC-Cc
Q 027527 94 WKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GE 156 (222)
Q Consensus 94 ~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p-fp 156 (222)
.+.++.+||.|++.||++|++..+.+.++..++...++.++.|.++.. ...++++++. +|
T Consensus 28 ~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~---~~l~~~~~v~~~P 88 (504)
T 2b5e_A 28 IQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTEN---QDLCMEHNIPGFP 88 (504)
T ss_dssp HTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTC---HHHHHHTTCCSSS
T ss_pred HhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCC---HHHHHhcCCCcCC
Confidence 345678889999999999999999999999998777899999998865 3355555655 44
No 205
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.31 E-value=0.00035 Score=59.07 Aligned_cols=46 Identities=4% Similarity=-0.135 Sum_probs=38.5
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHh---CCCEEEEEcCCCH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA---SGVALVLIGPGSV 141 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~---~gv~lvaIs~~s~ 141 (222)
+++++|+.|++.|||+|++.++.+.++..++.+ .++.+..|..+..
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~ 185 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYEN 185 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTC
T ss_pred CCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccC
Confidence 457888889999999999999999999888742 5788888877644
No 206
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=97.30 E-value=0.00047 Score=61.63 Aligned_cols=57 Identities=7% Similarity=0.103 Sum_probs=44.2
Q ss_pred CCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHh-----CCCEEEEEcCCCHHHHHHHHHHcCCC
Q 027527 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-----SGVALVLIGPGSVEQARTFSEQTKFK 154 (222)
Q Consensus 95 ~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~-----~gv~lvaIs~~s~~~i~~f~~~~~~p 154 (222)
++++.+||.|++.||++|++.++.+.++.+++++ .++.++.|.++.. ...++++++.
T Consensus 20 ~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~---~~l~~~~~v~ 81 (382)
T 2r2j_A 20 NNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQH---SDIAQRYRIS 81 (382)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTC---HHHHHHTTCC
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCcc---HHHHHhcCCC
Confidence 3456788889999999999999999999998853 3488888888754 3345555655
No 207
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=97.26 E-value=0.00029 Score=57.82 Aligned_cols=57 Identities=11% Similarity=0.155 Sum_probs=43.7
Q ss_pred CCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCC--CEEEEEcCCCHHHHHHHHHHcCCC
Q 027527 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASG--VALVLIGPGSVEQARTFSEQTKFK 154 (222)
Q Consensus 95 ~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~g--v~lvaIs~~s~~~i~~f~~~~~~p 154 (222)
..++.+++.|++.||++|+...+.+.++.+++.+.+ +.++.|..+.... +++++++.
T Consensus 145 ~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~---l~~~~~v~ 203 (241)
T 3idv_A 145 NDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETD---LAKRFDVS 203 (241)
T ss_dssp HHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHH---HHHHTTCC
T ss_pred ccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHH---HHHHcCCc
Confidence 345678889999999999999999999999987654 8888888775433 34444544
No 208
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.17 E-value=0.0002 Score=57.48 Aligned_cols=83 Identities=17% Similarity=0.067 Sum_probs=56.3
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcC-------------------------------------
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP------------------------------------- 138 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~------------------------------------- 138 (222)
+.++.|+.|+.++||+|....+.|.++.+++.. .+.+..+..
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~~~~~~s~~aa~a~~aa~~~~~~~~~~~~lf~~~~~~~ 99 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHVVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQK 99 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEECCCSGGGHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCS
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC-ceEEEEeccccCcccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHhC
Confidence 357788889999999999999999888777643 466655543
Q ss_pred ---CCHHHHHHHHHHc-CCCCc------------eeecCChHHHHHcCCccccceee
Q 027527 139 ---GSVEQARTFSEQT-KFKGE------------VYADPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 139 ---~s~~~i~~f~~~~-~~pfp------------il~Dpd~~lyk~lGl~~~~~~~~ 179 (222)
.+.+.+.+++++. |++.+ -..+.+.++.+.+|+.-++...+
T Consensus 100 ~~~~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~vi 156 (195)
T 2znm_A 100 IRLENRSVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQKLTEQYRIDSTPTVIV 156 (195)
T ss_dssp SCTTSHHHHHHHHHTCSSSCHHHHHHHHTSHHHHHHHHHHHHHHHHTTCCSSSEEEE
T ss_pred CCCCCHHHHHHHHHHcCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCCCCeEEE
Confidence 1345566677776 77653 13344566677788776665433
No 209
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=97.16 E-value=0.00013 Score=66.84 Aligned_cols=45 Identities=9% Similarity=0.100 Sum_probs=38.7
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhC-CCEEEEEcCCCH
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-GVALVLIGPGSV 141 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~-gv~lvaIs~~s~ 141 (222)
++.+||.|++.||++|++.++.+.++.+++.+. ++.++.|..+..
T Consensus 370 ~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~ 415 (481)
T 3f8u_A 370 NKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN 415 (481)
T ss_dssp TCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS
T ss_pred CCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch
Confidence 577899999999999999999999999998765 688888877654
No 210
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=97.14 E-value=0.00021 Score=61.32 Aligned_cols=42 Identities=14% Similarity=0.053 Sum_probs=36.2
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCC
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s 140 (222)
++.|||.|++.||++|+...+.|.++..++. ++.++.|..+.
T Consensus 133 ~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~--~v~f~kVd~d~ 174 (245)
T 1a0r_P 133 ITTIVVHIYEDGIKGCDALNSSLICLAAEYP--MVKFCKIKASN 174 (245)
T ss_dssp TCEEEEEEECTTSTTHHHHHHHHHHHHHHCT--TSEEEEEEHHH
T ss_pred CCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CCEEEEEeCCc
Confidence 5688999999999999999999999988874 48888887654
No 211
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.14 E-value=0.00045 Score=56.69 Aligned_cols=56 Identities=13% Similarity=0.008 Sum_probs=42.2
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC-Cc
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GE 156 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p-fp 156 (222)
+++++|+.|++.||++|++..+.+.++..++ .++.++.|..+... +.++++++. +|
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~--~~v~~~~vd~~~~~---~l~~~~~v~~~P 191 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAN--DYITSKVIDASENQ---DLAEQFQVVGVP 191 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHC--TTEEEEEEEGGGCH---HHHHHTTCCSSS
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHC--CCeEEEEEECCCCH---HHHHHcCCcccC
Confidence 4577788899999999999999999988877 37888888776432 234455654 45
No 212
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=97.14 E-value=0.00041 Score=60.95 Aligned_cols=46 Identities=11% Similarity=0.141 Sum_probs=38.1
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhC-CCEEEEEcCCCH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-GVALVLIGPGSV 141 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~-gv~lvaIs~~s~ 141 (222)
.++.++|.|++.||++|++.++.+.++.+++++. ++.++.|..+..
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~ 312 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTAN 312 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTC
T ss_pred CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCcc
Confidence 4567888999999999999999999999998764 577777776643
No 213
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.10 E-value=0.00014 Score=56.88 Aligned_cols=69 Identities=6% Similarity=-0.036 Sum_probs=36.9
Q ss_pred CCCccCCCeEEEEEEcCCC--ChhHHHHHHHHHHhHHHHHhCCCE--EEEEcCCCHHHHHHHHHHcCCC-Cc--eeecCC
Q 027527 90 ISDLWKDRKAVVAFARHFG--CVLCRKRADYLAAKKDVMDASGVA--LVLIGPGSVEQARTFSEQTKFK-GE--VYADPN 162 (222)
Q Consensus 90 Lsdl~~~~~vvVvF~R~~~--Cp~C~~el~~L~~~~~~l~~~gv~--lvaIs~~s~~~i~~f~~~~~~p-fp--il~Dpd 162 (222)
|.++.+..+.+|++|.+.| |++|+..++.|.++.+++ .++. ++.|..+.. .+.++++++. +| ++. .+
T Consensus 27 f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~--~~v~~~~~~Vd~d~~---~~la~~~~V~~iPT~~~f-k~ 100 (142)
T 2es7_A 27 VDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF--PQFDWQVAVADLEQS---EAIGDRFNVRRFPATLVF-TD 100 (142)
T ss_dssp -------CCSEEEEECCCSCC----CCHHHHHHHHHHTC--TTSCCEEEEECHHHH---HHHHHTTTCCSSSEEEEE-SC
T ss_pred HHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh--cccceeEEEEECCCC---HHHHHhcCCCcCCeEEEE-eC
Confidence 3333333334566677766 999999999999999888 3577 888876543 3444455543 33 444 44
Q ss_pred hH
Q 027527 163 HS 164 (222)
Q Consensus 163 ~~ 164 (222)
++
T Consensus 101 G~ 102 (142)
T 2es7_A 101 GK 102 (142)
T ss_dssp C-
T ss_pred CE
Confidence 44
No 214
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=97.08 E-value=0.00025 Score=53.35 Aligned_cols=46 Identities=15% Similarity=0.104 Sum_probs=33.0
Q ss_pred CCCeEEEEEEcCCCCh--------------hHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 95 KDRKAVVAFARHFGCV--------------LCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 95 ~~~~vvVvF~R~~~Cp--------------~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
+.++.+|+.|++.||+ +|+...+.+.++.+++.. ++.++.|..+..
T Consensus 19 ~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d~~ 78 (123)
T 1oaz_A 19 KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN 78 (123)
T ss_dssp SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTSC
T ss_pred hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECCCC
Confidence 3456788888999999 999999999998888754 488888887753
No 215
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=97.04 E-value=0.0002 Score=63.12 Aligned_cols=57 Identities=9% Similarity=0.176 Sum_probs=42.3
Q ss_pred cCCCeEEEEEEcCCCChhHHHHHHH-------HHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 027527 94 WKDRKAVVAFARHFGCVLCRKRADY-------LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (222)
Q Consensus 94 ~~~~~vvVvF~R~~~Cp~C~~el~~-------L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p 154 (222)
.+..+.++|.|++.||+ |+..++. +.++.++++..++.++.|.++.... .++++++.
T Consensus 25 i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~---l~~~~~v~ 88 (350)
T 1sji_A 25 LKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAK---LAKKLGFD 88 (350)
T ss_dssp HTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHH---HHHHHTCC
T ss_pred HhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHH---HHHhcCCC
Confidence 34457889999999999 9888888 7777777777789999998876533 33444543
No 216
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.02 E-value=0.0012 Score=52.59 Aligned_cols=40 Identities=20% Similarity=0.179 Sum_probs=30.8
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEE
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaI 136 (222)
+.++.|+.|..++||+|....+.|.++.+++.. .+.+..+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~ 63 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK-DVRFTLV 63 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TEEEEEE
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC-ceEEEEe
Confidence 356788888999999999999999888776632 4665544
No 217
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.01 E-value=0.0036 Score=49.21 Aligned_cols=47 Identities=15% Similarity=0.123 Sum_probs=36.6
Q ss_pred EeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhC-CCEEEEE
Q 027527 88 IPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-GVALVLI 136 (222)
Q Consensus 88 v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~-gv~lvaI 136 (222)
+.+++. +.++.|+.|..++||+|++..+.+.+..+++.+. .++++..
T Consensus 20 ~~~G~~--~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~ 67 (175)
T 1z6m_A 20 LHIGES--NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIK 67 (175)
T ss_dssp EEESCT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEE
T ss_pred cccCCC--CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEE
Confidence 556654 5688889999999999999999999888777443 4676654
No 218
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=96.87 E-value=0.0028 Score=43.42 Aligned_cols=53 Identities=17% Similarity=0.271 Sum_probs=34.8
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC-Cceeec
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GEVYAD 160 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p-fpil~D 160 (222)
|++|...|||+|++..+.|. +.|+.+..|..+......++.++++.. .|.+.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~-------~~~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~~~ 56 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAME-------NRGFDFEMINVDRVPEAAEALRAQGFRQLPVVIA 56 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------HTTCCCEEEETTTCHHHHHHHHHTTCCSSCEEEE
T ss_pred EEEEcCCCChhHHHHHHHHH-------HCCCCeEEEECCCCHHHHHHHHHhCCCccCEEEE
Confidence 56688999999998666554 457777778777543444444445654 675554
No 219
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=96.86 E-value=0.00052 Score=62.73 Aligned_cols=53 Identities=9% Similarity=-0.027 Sum_probs=42.8
Q ss_pred eEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 027527 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (222)
Q Consensus 98 ~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p 154 (222)
+.+||.|++.||++|+...+.+.++.+++... +.++.|.++... ..++++++.
T Consensus 22 ~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~~~---~l~~~~~v~ 74 (481)
T 3f8u_A 22 GLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTANT---NTCNKYGVS 74 (481)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTTCH---HHHHHTTCC
T ss_pred CeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCCCH---HHHHhcCCC
Confidence 78899999999999999999999999988665 888888887643 344555554
No 220
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=96.83 E-value=0.0016 Score=53.81 Aligned_cols=80 Identities=13% Similarity=0.112 Sum_probs=48.0
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcC-----CCH--HHH-HHHH------------HHcCCC-
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP-----GSV--EQA-RTFS------------EQTKFK- 154 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~-----~s~--~~i-~~f~------------~~~~~p- 154 (222)
+.+++|+.|..+|||+|++..+.|.++.+ .|++++.+.. ++. ..+ ..++ +..+++
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~----~~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~ 160 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYND----LGITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKE 160 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHH----TTEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSS
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHh----CCcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCCh
Confidence 45778888899999999999988877433 3677765421 111 111 1111 111111
Q ss_pred --CceeecCChHHHHHcCCccccceee
Q 027527 155 --GEVYADPNHSSYEALSFVSGVLVTF 179 (222)
Q Consensus 155 --fpil~Dpd~~lyk~lGl~~~~~~~~ 179 (222)
.....|.+.++.+.+|+..++...+
T Consensus 161 ~~~~~~v~~~~~l~~~~gV~gTPt~vi 187 (211)
T 1t3b_A 161 VKTPNIVKKHYELGIQFGVRGTPSIVT 187 (211)
T ss_dssp CCCSSHHHHHHHHHHHHTCCSSCEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCcCCEEEE
Confidence 1233456677788888887776655
No 221
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=96.83 E-value=0.0031 Score=51.26 Aligned_cols=56 Identities=5% Similarity=0.176 Sum_probs=41.3
Q ss_pred CCeEEEEEEcCC-CChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 027527 96 DRKAVVAFARHF-GCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (222)
Q Consensus 96 ~~~vvVvF~R~~-~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p 154 (222)
.++++|++|+.. ||++|++..+.+.++.+. ...+.++.|..++++. .+.++++++.
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~--~~~v~~~~vd~~~~~~-~~~~~~~~v~ 77 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSEL--TDKLSYEIVDFDTPEG-KELAKRYRID 77 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTT--CTTEEEEEEETTSHHH-HHHHHHTTCC
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhh--CCceEEEEEeCCCccc-HHHHHHcCCC
Confidence 457888889999 999999999988887643 3458888998886322 3455555654
No 222
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=96.82 E-value=0.00068 Score=51.73 Aligned_cols=58 Identities=10% Similarity=0.043 Sum_probs=39.3
Q ss_pred cCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHH-HHHHHHcCCC
Q 027527 94 WKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA-RTFSEQTKFK 154 (222)
Q Consensus 94 ~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i-~~f~~~~~~p 154 (222)
.+..+.+|+||.++||++|+.-.+.+.++.++ .++.++-|..+....+ .+.++++++.
T Consensus 21 i~~~~~vvi~khatwCgpc~~~~~~~e~~~~~---~~v~~~~vdVde~r~~Sn~IA~~~~V~ 79 (112)
T 3iv4_A 21 IEENKYVFVLKHSETCPISANAYDQFNKFLYE---RDMDGYYLIVQQERDLSDYIAKKTNVK 79 (112)
T ss_dssp HHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH---HTCCEEEEEGGGGHHHHHHHHHHHTCC
T ss_pred HhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc---CCceEEEEEeecCchhhHHHHHHhCCc
Confidence 33356789999999999999999999998773 4566666655543222 3344444444
No 223
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=96.80 E-value=0.00081 Score=65.32 Aligned_cols=47 Identities=9% Similarity=-0.153 Sum_probs=38.8
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~ 143 (222)
.++.+|+.|++.||++|++.++.+.++..+++. ++.++.|..+....
T Consensus 674 ~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~-~~~~~~vd~~~~~~ 720 (780)
T 3apo_A 674 GKTHWVVDFYAPWSGPSQNFAPEFELLARMIKG-KVRAGKVDCQAYPQ 720 (780)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CceEEEEECCCCHH
Confidence 456678888899999999999999999988854 68899998875443
No 224
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=96.75 E-value=0.0018 Score=62.87 Aligned_cols=47 Identities=6% Similarity=-0.157 Sum_probs=39.2
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHH
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i 144 (222)
++.+++.|++.||++|+++++.|.++.++++. .+.++.|.++....+
T Consensus 455 ~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~-~v~~~~vd~~~~~~~ 501 (780)
T 3apo_A 455 KEPWLVDFFAPWSPPSRALLPELRKASTLLYG-QLKVGTLDCTIHEGL 501 (780)
T ss_dssp CSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHH
T ss_pred CCeEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEeCCCCHHH
Confidence 45678888999999999999999999998864 589999988765443
No 225
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=96.70 E-value=0.0021 Score=48.69 Aligned_cols=40 Identities=13% Similarity=-0.009 Sum_probs=35.1
Q ss_pred EEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCC
Q 027527 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (222)
Q Consensus 99 vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s 140 (222)
.||+.|++.||++|+...+.|.++.+++. +++++-|..+.
T Consensus 25 ~vvv~F~a~wc~~C~~~~p~l~~la~~~~--~v~f~kvd~d~ 64 (118)
T 3evi_A 25 WVIIHLYRSSIPMCLLVNQHLSLLARKFP--ETKFVKAIVNS 64 (118)
T ss_dssp EEEEEEECTTSHHHHHHHHHHHHHHHHCT--TSEEEEEEGGG
T ss_pred eEEEEEeCCCChHHHHHHHHHHHHHHHCC--CCEEEEEEhHH
Confidence 78889999999999999999999988874 58888888775
No 226
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=96.66 E-value=0.0047 Score=41.33 Aligned_cols=53 Identities=17% Similarity=0.277 Sum_probs=35.7
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC-Cceeec
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GEVYAD 160 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p-fpil~D 160 (222)
|++|...|||+|++....|.+ .|+.+..|..+......++.+++++. .|.+.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~-------~~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~ 56 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDR-------AGLAYNTVDISLDDEARDYVMALGYVQAPVVEV 56 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE
T ss_pred EEEEeCCCChHHHHHHHHHHH-------cCCCcEEEECCCCHHHHHHHHHcCCCccCEEEE
Confidence 566789999999987666654 46777777776544444444566654 676665
No 227
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=96.59 E-value=0.0059 Score=49.90 Aligned_cols=55 Identities=16% Similarity=0.248 Sum_probs=39.1
Q ss_pred CeEEEEEEcC-------CCChhHHHHHHHHHHhHHHHHh----CCCEEEEEcCCCHHHHHHHHHHcCCC
Q 027527 97 RKAVVAFARH-------FGCVLCRKRADYLAAKKDVMDA----SGVALVLIGPGSVEQARTFSEQTKFK 154 (222)
Q Consensus 97 ~~vvVvF~R~-------~~Cp~C~~el~~L~~~~~~l~~----~gv~lvaIs~~s~~~i~~f~~~~~~p 154 (222)
...|||+|++ .||++|+...+.+.++.+++.. ..+.+.-|..+... +.++++++.
T Consensus 37 ~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~---~la~~~~I~ 102 (178)
T 3ga4_A 37 GYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVP---QLVKDLKLQ 102 (178)
T ss_dssp TCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCH---HHHHHTTCC
T ss_pred CCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCH---HHHHHcCCC
Confidence 3467888888 5999999999999999998852 34667777776533 333444543
No 228
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=96.54 E-value=0.0025 Score=43.93 Aligned_cols=56 Identities=7% Similarity=0.080 Sum_probs=38.3
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH-HHHHHHHHHcC---CCCcee
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQARTFSEQTK---FKGEVY 158 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~-~~i~~f~~~~~---~pfpil 158 (222)
|+.|...|||+|++..+.|.++..+. .++.+..|..+.. +..+++.+.++ ..+|.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~--~~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i 62 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNER--DDFQYQYVDIRAEGITKEDLQQKAGKPVETVPQI 62 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHH--SSCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcC--CCceEEEEecccChHHHHHHHHHhCCCCceeCeE
Confidence 56688999999999988888876653 5788888866432 12235566666 346644
No 229
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=96.54 E-value=0.0015 Score=47.74 Aligned_cols=57 Identities=14% Similarity=0.046 Sum_probs=34.5
Q ss_pred CCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH-H-HHHHHHHHcCCC-Ccee
Q 027527 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-E-QARTFSEQTKFK-GEVY 158 (222)
Q Consensus 95 ~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~-~-~i~~f~~~~~~p-fpil 158 (222)
++++ |++ |++.|||+|++..+.|.++..+ +.++-|..+.. + ....+.+.+++. +|.+
T Consensus 18 ~~~~-vv~-f~a~~C~~C~~~~~~l~~~~~~-----~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~ 77 (116)
T 2e7p_A 18 SSAP-VVV-FSKTYCGYCNRVKQLLTQVGAS-----YKVVELDELSDGSQLQSALAHWTGRGTVPNV 77 (116)
T ss_dssp TSSS-EEE-EECTTCHHHHHHHHHHHHHTCC-----CEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE
T ss_pred cCCC-EEE-EECCCChhHHHHHHHHHHcCCC-----eEEEEccCCCChHHHHHHHHHHhCCCCcCEE
Confidence 3444 444 8999999999998888776432 35566655432 2 223455555653 5533
No 230
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=96.48 E-value=0.003 Score=58.16 Aligned_cols=44 Identities=18% Similarity=0.211 Sum_probs=35.8
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHh--CCCEEEEEcCC
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPG 139 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~--~gv~lvaIs~~ 139 (222)
.++.+||.|++.||++|+..++.+.++.+++.. .++.++.|..+
T Consensus 375 ~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~ 420 (504)
T 2b5e_A 375 PKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHT 420 (504)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGG
T ss_pred CCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCC
Confidence 346688888999999999999999999998863 36777777654
No 231
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=96.46 E-value=0.0069 Score=49.47 Aligned_cols=56 Identities=7% Similarity=0.013 Sum_probs=41.8
Q ss_pred CCeEEEEEE----cCCCChhHHHHHHHHHHhHHHHHh-CCCEEEEEcCCCHHHHHHHHHHcCCC
Q 027527 96 DRKAVVAFA----RHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGSVEQARTFSEQTKFK 154 (222)
Q Consensus 96 ~~~vvVvF~----R~~~Cp~C~~el~~L~~~~~~l~~-~gv~lvaIs~~s~~~i~~f~~~~~~p 154 (222)
.++++|+|| |..||+.|+..++.+.++..++.+ ..+.+..|.++.. .+.++++++.
T Consensus 20 ~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~---~~l~~~~~v~ 80 (229)
T 2ywm_A 20 KEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTH---KEETEKYGVD 80 (229)
T ss_dssp CSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTC---HHHHHHTTCC
T ss_pred cCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCccc---HHHHHHcCCC
Confidence 468888888 688999999999999999877753 4588888877643 3445555655
No 232
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=96.45 E-value=0.0023 Score=44.15 Aligned_cols=36 Identities=25% Similarity=0.397 Sum_probs=25.2
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~ 139 (222)
+++|+..|||+|++..+.|.++.+ +.|+.+..+..+
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~---~~~~~~~~~~v~ 39 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAID---PSKYTVEIVHLG 39 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSC---TTTEEEEEEETT
T ss_pred eEEEeCCCCCchHHHHHHHHHHHH---hcCCeEEEEEec
Confidence 566778999999998888876543 345555555444
No 233
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=96.41 E-value=0.0028 Score=52.91 Aligned_cols=40 Identities=15% Similarity=0.057 Sum_probs=34.9
Q ss_pred eEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC
Q 027527 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (222)
Q Consensus 98 ~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~ 139 (222)
+.|||.|++.||++|+...+.|.++..++. ++.++.|..+
T Consensus 121 k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~ 160 (217)
T 2trc_P 121 TTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS 160 (217)
T ss_dssp CEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH
T ss_pred cEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC
Confidence 678888899999999999999999888873 6888888776
No 234
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.40 E-value=0.0031 Score=45.98 Aligned_cols=67 Identities=22% Similarity=0.283 Sum_probs=39.8
Q ss_pred CCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCCcee
Q 027527 85 GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVY 158 (222)
Q Consensus 85 G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~pfpil 158 (222)
|..-.|...... ..+|++|...|||+|+.-.+.|.++. .++.+.-|..++++. .++.++++...|.+
T Consensus 4 ~~~~~l~~~~~~-~~~v~~f~~~~C~~C~~~~~~L~~l~-----~~i~~~~vdi~~~~~-~el~~~~g~~vP~l 70 (100)
T 1wjk_A 4 GSSGNLSASNRA-LPVLTLFTKAPCPLCDEAKEVLQPYK-----DRFILQEVDITLPEN-STWYERYKFDIPVF 70 (100)
T ss_dssp CCCCCCCCSCCC-CCEEEEEECSSCHHHHHHHHHTSTTS-----SSSEEEEEETTSSTT-HHHHHHSSSSCSEE
T ss_pred CcchhhhhccCC-CCEEEEEeCCCCcchHHHHHHHHHhh-----hCCeEEEEECCCcch-HHHHHHHCCCCCEE
Confidence 333444443333 34566678999999998777766542 347888888773221 44555555345644
No 235
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=96.26 E-value=0.0013 Score=51.89 Aligned_cols=52 Identities=4% Similarity=-0.093 Sum_probs=37.4
Q ss_pred EEEEEEcCCC--ChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCC
Q 027527 99 AVVAFARHFG--CVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (222)
Q Consensus 99 vvVvF~R~~~--Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~ 153 (222)
.||||||+.| |++|+...+-|.++.+++....++++-|..| +-.+.+.++++
T Consensus 36 ~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvD---e~~~lA~~ygV 89 (140)
T 2qgv_A 36 DGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLE---QSEAIGDRFGA 89 (140)
T ss_dssp SEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHH---HHHHHHHHHTC
T ss_pred CEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECC---CCHHHHHHcCC
Confidence 3556999999 9999999999999998885433777766655 33444444454
No 236
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=96.24 E-value=0.0092 Score=46.85 Aligned_cols=44 Identities=16% Similarity=0.049 Sum_probs=35.7
Q ss_pred CeEEEEEEcCCCC--hhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 97 RKAVVAFARHFGC--VLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 97 ~~vvVvF~R~~~C--p~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
+..+||+||+.|| ++|+...+-|.++.+++.. .++++-|..|..
T Consensus 33 ~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~-~v~~~KVdvDe~ 78 (137)
T 2qsi_A 33 GKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG-RLVAAEVAAEAE 78 (137)
T ss_dssp SSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT-TEEEEEECGGGH
T ss_pred CCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC-CcEEEEEECCCC
Confidence 3379999999999 9999999999999988843 477777776643
No 237
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=96.23 E-value=0.0069 Score=53.89 Aligned_cols=56 Identities=9% Similarity=0.046 Sum_probs=38.7
Q ss_pred CCeEEEEEEcCCCChhHHHHH------HHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 027527 96 DRKAVVAFARHFGCVLCRKRA------DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el------~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p 154 (222)
..+.+||.|++.||++|+..- +.+.+...+++..++.+..|.++.... .++++++.
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~---l~~~~~V~ 90 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAA---VAKKLGLT 90 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHH---HHHHHTCC
T ss_pred hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHH---HHHHcCCC
Confidence 457788899999999984322 356677777766689999998886533 34444544
No 238
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=96.22 E-value=0.0071 Score=45.39 Aligned_cols=53 Identities=19% Similarity=0.164 Sum_probs=37.8
Q ss_pred EEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC-CHHHHHHHHHHcCCCCcee
Q 027527 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQTKFKGEVY 158 (222)
Q Consensus 99 vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~-s~~~i~~f~~~~~~pfpil 158 (222)
..|+.|+..||++|+.-.+.|.++.++ .|+.+.-|..+ +++..+ ++++..|.+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e---~~i~~~~vDId~d~~l~~----~ygv~VP~l 83 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKK---SWFELEVINIDGNEHLTR----LYNDRVPVL 83 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHH---SCCCCEEEETTTCHHHHH----HSTTSCSEE
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHh---cCCeEEEEECCCCHHHHH----HhCCCCceE
Confidence 457778899999999988888877665 45777778776 444444 445556654
No 239
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=96.08 E-value=0.018 Score=48.34 Aligned_cols=46 Identities=15% Similarity=0.078 Sum_probs=33.3
Q ss_pred CeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEE
Q 027527 86 NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (222)
Q Consensus 86 ~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaI 136 (222)
..+.++.- +.+++|+.|..+|||+|++..+.|.++.++ .+++++.+
T Consensus 88 ~~i~~G~~--~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~---g~v~v~~~ 133 (241)
T 1v58_A 88 HWLLDGKK--DAPVIVYVFADPFCPYCKQFWQQARPWVDS---GKVQLRTL 133 (241)
T ss_dssp CCEEESCT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHT---TSEEEEEE
T ss_pred CCceECCC--CCCeEEEEEECCCChhHHHHHHHHHHHHhC---CcEEEEEE
Confidence 34555553 567888999999999999999988876553 34665543
No 240
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=95.69 E-value=0.026 Score=42.75 Aligned_cols=66 Identities=17% Similarity=0.160 Sum_probs=52.3
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcC----CCHHHHHHHHHHcCCCCceeecCChHHHHHcCCcc
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~----~s~~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~ 173 (222)
|.+|-..+|+.|++-...| ++.|+....+.. .+.++++++.+..+.+..-+.+.....|+.+++..
T Consensus 2 i~iY~~~~C~~c~ka~~~L-------~~~gi~~~~~di~~~~~~~~el~~~l~~~~~~~~~l~n~~~~~~k~l~~~~ 71 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWL-------NRHDVVFQEHNIMTSPLSRDELLKILSYTENGTEDIISTRSKVFQKLDIDV 71 (120)
T ss_dssp EEEEECSSCHHHHHHHHHH-------HHTTCCEEEEETTTSCCCHHHHHHHHHHCSSTHHHHBCTTCHHHHHTTCCG
T ss_pred EEEEeCCCCHHHHHHHHHH-------HHcCCCeEEEecccCCCcHHHHHHHHhhcCCCHHHhhcCCcHHHHHcCCCc
Confidence 6678899999999766555 456766655543 25589999999999998888899999999999864
No 241
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=95.66 E-value=0.037 Score=38.58 Aligned_cols=52 Identities=13% Similarity=0.190 Sum_probs=35.2
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHc-CCC-Cceeec
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQT-KFK-GEVYAD 160 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~-~~p-fpil~D 160 (222)
|++|...|||+|++-...|.+ .|+....|..+ .+..+++.+.+ +.. +|.+..
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~-------~~i~~~~vdv~-~~~~~~l~~~~~~~~~vP~l~~ 61 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDK-------KGVKYTDIDAS-TSLRQEMVQRANGRNTFPQIFI 61 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHH-------HTCCEEEECSC-HHHHHHHHHHHHSSCCSCEEEE
T ss_pred EEEEECCCChhHHHHHHHHHH-------cCCCcEEEECC-HHHHHHHHHHhCCCCCcCEEEE
Confidence 566789999999976555543 46677777777 55566677766 543 675543
No 242
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=95.48 E-value=0.016 Score=41.49 Aligned_cols=49 Identities=12% Similarity=0.225 Sum_probs=30.3
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC-CHHHHHHHHHHcCCCCceee
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQTKFKGEVYA 159 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~-s~~~i~~f~~~~~~pfpil~ 159 (222)
|+.|++.||++|+.-.+.|.+...++ ..-|..+ +++..++| ++..|.+.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~------~~~vdid~~~~l~~~~----g~~vPtl~ 52 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA------FFSVFIDDDAALESAY----GLRVPVLR 52 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC------EEEEECTTCHHHHHHH----TTTCSEEE
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh------eEEEECCCCHHHHHHh----CCCcCeEE
Confidence 67788999999997776666543321 3445555 34444444 55566544
No 243
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=95.27 E-value=0.049 Score=36.84 Aligned_cols=53 Identities=11% Similarity=0.153 Sum_probs=32.9
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCC-HHHHHHHHHHcCCC-Cceeec
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKFK-GEVYAD 160 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s-~~~i~~f~~~~~~p-fpil~D 160 (222)
|++|...|||.|++-...|.+ .|+.+..|..+. ++...++.+.++.. .|.+.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~-------~~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~~ 57 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSS-------KGVSFQELPIDGNAAKREEMIKRSGRTTVPQIFI 57 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------HTCCCEEEECTTCSHHHHHHHHHHSSCCSCEEEE
T ss_pred EEEEECCCChhHHHHHHHHHH-------CCCCcEEEECCCCHHHHHHHHHHhCCCCcCEEEE
Confidence 445678999999976666554 355555555543 34555677666654 675544
No 244
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=95.25 E-value=0.019 Score=41.22 Aligned_cols=56 Identities=20% Similarity=0.118 Sum_probs=30.6
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCC--HHHHHHHHHHcCCC-Ccee
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS--VEQARTFSEQTKFK-GEVY 158 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s--~~~i~~f~~~~~~p-fpil 158 (222)
|++|...|||+|++-.+.|.+...+.. ++..+-|..+. ++..+.+.+.++.. +|.+
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~~--~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i 72 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKEG--LLEFVDITATSDTNEIQDYLQQLTGARTVPRV 72 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCTT--SEEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCCC--ccEEEEccCCCCHHHHHHHHHHHhCCCCcCeE
Confidence 445678999999987776665432211 13444444332 23333455566654 5644
No 245
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=95.10 E-value=0.057 Score=40.96 Aligned_cols=68 Identities=18% Similarity=0.263 Sum_probs=53.4
Q ss_pred EEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcC--C--CHHHHHHHHHHcCCCCceeecCChHHHHHcCCccc
Q 027527 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--G--SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (222)
Q Consensus 100 vVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~--~--s~~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~ 174 (222)
+|.+|-..+|+.|++-...|. ++|+..-.|.. + +.++++++.++.+.+..-+.+.....|+.+++...
T Consensus 4 Mi~iY~~~~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~l~n~~~~~~k~l~l~~~ 75 (120)
T 3fz4_A 4 MLTFYEYPKCSTCRRAKAELD-------DLAWDYDAIDIKKNPPAASLIRNWLENSGLELKKFFNTSGQSYRALGLKDK 75 (120)
T ss_dssp SEEEEECSSCHHHHHHHHHHH-------HHTCCEEEEETTTSCCCHHHHHHHHHHSCCCGGGGBCTTSHHHHHTTHHHH
T ss_pred eEEEEeCCCChHHHHHHHHHH-------HcCCceEEEEeccCchhHHHHHHHHHHcCCCHHHHhCCCCcchhhcCcccc
Confidence 467888999999998666654 55666555433 3 55899999999999988888999999999998643
No 246
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=95.09 E-value=0.067 Score=42.27 Aligned_cols=88 Identities=11% Similarity=0.119 Sum_probs=52.8
Q ss_pred CeEEEEEEcCCCChhHHHHHHHH---HHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC---CCCceeecCC-hHHHHHc
Q 027527 97 RKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSVEQARTFSEQTK---FKGEVYADPN-HSSYEAL 169 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L---~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~---~pfpil~Dpd-~~lyk~l 169 (222)
++.|+|.|.+.||+.|++.-.+. .+..+.+ ..+..++-+..+++ +.+++.+.++ +|+-++.|++ ++..+.+
T Consensus 42 ~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l-~~~fv~v~~d~~~~-~~~~l~~~y~v~~~P~~~fld~~~G~~l~~~ 119 (153)
T 2dlx_A 42 NKWLMINIQNVQDFACQCLNRDVWSNEAVKNII-REHFIFWQVYHDSE-EGQRYIQFYKLGDFPYVSILDPRTGQKLVEW 119 (153)
T ss_dssp TCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHH-HHTEEEEEEESSSH-HHHHHHHHHTCCSSSEEEEECTTTCCCCEEE
T ss_pred CCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHH-HcCeEEEEEecCCH-hHHHHHHHcCCCCCCEEEEEeCCCCcEeeec
Confidence 56788888899999999865544 2223333 33677777777765 3445666665 4555788998 5432222
Q ss_pred CCccccceeeccchhHHHHHHHHH
Q 027527 170 SFVSGVLVTFTPKAGLKIIQSYME 193 (222)
Q Consensus 170 Gl~~~~~~~~~P~a~~~~l~~~~~ 193 (222)
+ .+.|......+..++.
T Consensus 120 ~-------g~~~~~fl~~L~~~l~ 136 (153)
T 2dlx_A 120 H-------QLDVSSFLDQVTGFLG 136 (153)
T ss_dssp S-------SCCHHHHHHHHHHHHH
T ss_pred C-------CCCHHHHHHHHHHHHH
Confidence 1 1445555555554433
No 247
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=95.08 E-value=0.084 Score=38.62 Aligned_cols=57 Identities=12% Similarity=0.144 Sum_probs=36.1
Q ss_pred cCCCeEEEEEEcC----CCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCC-HHHHHHHHHHcCCC-Ccee
Q 027527 94 WKDRKAVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKFK-GEVY 158 (222)
Q Consensus 94 ~~~~~vvVvF~R~----~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s-~~~i~~f~~~~~~p-fpil 158 (222)
.+..+ |++|..+ .|||+|++-...|. +.|+....|..+. ++..+++.+.++.+ +|.+
T Consensus 12 i~~~~-vvvy~~g~~~~~~Cp~C~~ak~~L~-------~~~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~i 74 (109)
T 1wik_A 12 TNKAS-VMLFMKGNKQEAKCGFSKQILEILN-------STGVEYETFDILEDEEVRQGLKTFSNWPTYPQL 74 (109)
T ss_dssp HTTSS-EEEEESSTTTCCCSSTHHHHHHHHH-------HTCSCEEEEESSSCHHHHHHHHHHHSCCSSCEE
T ss_pred hccCC-EEEEEecCCCCCCCchHHHHHHHHH-------HcCCCeEEEECCCCHHHHHHHHHHhCCCCCCEE
Confidence 33444 5566665 89999997655554 4577777777764 44445566666654 6643
No 248
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=95.04 E-value=0.021 Score=46.17 Aligned_cols=41 Identities=15% Similarity=0.075 Sum_probs=31.8
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEc
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs 137 (222)
..+++|+.|..+|||+|+...+.|.++.+++.+ .+.+.-+-
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p 63 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEH 63 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEE
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-CeEEEEec
Confidence 357888889999999999999999888776654 45555443
No 249
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=95.04 E-value=0.042 Score=41.08 Aligned_cols=50 Identities=8% Similarity=0.129 Sum_probs=29.1
Q ss_pred EEEEcCCCChhHHHH-HHHHHHhHHHHHhCC---CEEEEEcCCC----HHHHHHHHHHcCCC-Cce
Q 027527 101 VAFARHFGCVLCRKR-ADYLAAKKDVMDASG---VALVLIGPGS----VEQARTFSEQTKFK-GEV 157 (222)
Q Consensus 101 VvF~R~~~Cp~C~~e-l~~L~~~~~~l~~~g---v~lvaIs~~s----~~~i~~f~~~~~~p-fpi 157 (222)
|++|...|||+|++- .+. |++.| +.+..|..+. .+..++..+.++.. .|.
T Consensus 27 Vvvf~~~~Cp~C~~alk~~-------L~~~~~~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~ 85 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTL-------FEKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQRTVPN 85 (118)
T ss_dssp EEEEECSSCHHHHHHHHHH-------HTTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCE
T ss_pred EEEEEcCCCcCHHHHHHHH-------HHHcCCCCCCeEEEECccCCChHHHHHHHHHHhCCCCcCE
Confidence 445788999999976 333 34444 6655555542 12334455566653 563
No 250
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=95.03 E-value=0.042 Score=41.70 Aligned_cols=66 Identities=15% Similarity=0.288 Sum_probs=52.1
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEE--cCC--CHHHHHHHHHHcCCCCceeecCChHHHHHcCCcc
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI--GPG--SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaI--s~~--s~~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~ 173 (222)
|.+|-..+|+.|++-...|. ++|+..-.| ..+ +.++++++.+..+++..-+.+.....|+.+|+..
T Consensus 6 i~iY~~p~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~l~n~~~~~~k~l~l~~ 75 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLI-------ENNIEYTNRLIVDDNPTVEELKAWIPLSGLPVKKFFNTSGVVYKELKLSS 75 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHH-------HTTCCCEEEETTTTCCCHHHHHHHHHHHTSCGGGGBCTTSHHHHHTTHHH
T ss_pred EEEEECCCChHHHHHHHHHH-------HcCCceEEEecccCcCCHHHHHHHHHHcCCCHHHeEeCCCchhhhcCcch
Confidence 66788999999998666654 456554444 333 5589999999999998888899999999999864
No 251
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=94.99 E-value=0.059 Score=39.07 Aligned_cols=56 Identities=13% Similarity=0.186 Sum_probs=32.4
Q ss_pred CCCeEEEEEEc----CCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC-CHHHHHHHHHHcCCC-Ccee
Q 027527 95 KDRKAVVAFAR----HFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQTKFK-GEVY 158 (222)
Q Consensus 95 ~~~~vvVvF~R----~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~-s~~~i~~f~~~~~~p-fpil 158 (222)
+..+ |++|.. +.|||+|++-.+.|.+ .|+....|..+ +++..+.+.+.++.+ +|.+
T Consensus 15 ~~~~-vvvf~~g~~~~~~C~~C~~~~~~L~~-------~~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v 76 (105)
T 2yan_A 15 NKAS-VMLFMKGNKQEAKCGFSKQILEILNS-------TGVEYETFDILEDEEVRQGLKAYSNWPTYPQL 76 (105)
T ss_dssp TSSS-EEEEESBCSSSBCTTHHHHHHHHHHH-------HTCCCEEEEGGGCHHHHHHHHHHHTCCSSCEE
T ss_pred ccCC-EEEEEecCCCCCCCccHHHHHHHHHH-------CCCCeEEEECCCCHHHHHHHHHHHCCCCCCeE
Confidence 3444 455655 3899999976665544 35555555554 344444556666654 5643
No 252
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=94.95 E-value=0.081 Score=40.47 Aligned_cols=65 Identities=15% Similarity=0.237 Sum_probs=50.6
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC----CHHHHHHHHHHcCCCCceeecCChHHHHHcCCc
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVEQARTFSEQTKFKGEVYADPNHSSYEALSFV 172 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~----s~~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~ 172 (222)
|.+|...+||.|++-...|. +.|+....+... +.++++++.+..+.+..-+.+.....|+.+|+.
T Consensus 3 i~lY~~~~C~~C~ka~~~L~-------~~gi~y~~~di~~~~~~~~el~~~l~~~~~~~~~l~n~~~~~~k~l~~~ 71 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLE-------EHEIPFVERNIFSEPLSIDEIKQILRMTEDGTDEIISTRSKVFQKLNVN 71 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------HTTCCEEEEETTTSCCCHHHHHHHHHTCSSCGGGTBCTTSHHHHHHCCC
T ss_pred EEEEeCCCChHHHHHHHHHH-------HcCCceEEEEccCCCccHHHHHHHHHHcCCCHHHhhcCCchHHHhcCcc
Confidence 56788999999997666554 457665555442 347889999988999888889999999999975
No 253
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=94.95 E-value=0.068 Score=40.55 Aligned_cols=66 Identities=15% Similarity=0.254 Sum_probs=51.6
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcC--C--CHHHHHHHHHHcCC-CCceeecCChHHHHHcCCcc
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--G--SVEQARTFSEQTKF-KGEVYADPNHSSYEALSFVS 173 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~--~--s~~~i~~f~~~~~~-pfpil~Dpd~~lyk~lGl~~ 173 (222)
|.+|-..+|+.|++-...|. ++|+..-.|.. + +.++++++.+..++ +..=+.+.....|+.+++..
T Consensus 7 i~iY~~p~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~~ 77 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVE-------QQGITPQVVLYLETPPSVDKLKELLQQLGFSDARQLMRTKEDLYKTLNLDD 77 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHH-------TTTCCCEEECTTTSCCCHHHHHHHHHHTTCSSGGGGBCTTSHHHHHTTTTC
T ss_pred EEEEECCCCHHHHHHHHHHH-------HcCCCcEEEeeccCCCcHHHHHHHHHhcCCcCHHHHhcCCChhhhhcCccc
Confidence 67888999999998666654 56665555533 2 45899999999999 77667789999999999874
No 254
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=94.93 E-value=0.08 Score=36.91 Aligned_cols=53 Identities=19% Similarity=0.202 Sum_probs=33.4
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCC-HHHHHHHHHHcCCC-Cceeec
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKFK-GEVYAD 160 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s-~~~i~~f~~~~~~p-fpil~D 160 (222)
|++|...|||.|++-...|. +.|+.+..|..+. ++..+++.+.++.. .|.+.+
T Consensus 8 v~ly~~~~C~~C~~~~~~L~-------~~~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l~~ 62 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLA-------RKGAEFNEIDASATPELRAEMQERSGRNTFPQIFI 62 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------HTTCCCEEEESTTSHHHHHHHHHHHTSSCCCEEEE
T ss_pred EEEEECCCChhHHHHHHHHH-------HcCCCcEEEECCCCHHHHHHHHHHhCCCCcCEEEE
Confidence 55677899999997655554 4466666666653 44555676666543 565443
No 255
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=94.91 E-value=0.07 Score=40.37 Aligned_cols=66 Identities=20% Similarity=0.254 Sum_probs=52.6
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEE----cCCCHHHHHHHHHHcCCC-CceeecCChHHHHHcCCcc
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI----GPGSVEQARTFSEQTKFK-GEVYADPNHSSYEALSFVS 173 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaI----s~~s~~~i~~f~~~~~~p-fpil~Dpd~~lyk~lGl~~ 173 (222)
|.+|-..+|+.|++-...|. ++|+..-.| .+-+.++++++.++.+++ ..-+.+.....|+.+|+..
T Consensus 6 i~iY~~p~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~t~~eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~~ 76 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLE-------NQGIAPQVIKYLETSPSVEELKRLYQQLGLNEVRAMMRCKEELYKELNLGD 76 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHH-------HTTCCCEEECHHHHCCCHHHHHHHHHHHTCSSGGGGBCTTSHHHHHTTTTC
T ss_pred EEEEECCCChHHHHHHHHHH-------HcCCceEEEEeccCcCcHHHHHHHHHHcCCccHHHHhcCCCchhhhcCccc
Confidence 56888999999998766665 456654444 234668999999999998 7778899999999999876
No 256
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=94.88 E-value=0.044 Score=40.36 Aligned_cols=51 Identities=20% Similarity=0.241 Sum_probs=30.0
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCE---EEEEcCCCH----HHHHHHHHHcCCC-Ccee
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVA---LVLIGPGSV----EQARTFSEQTKFK-GEVY 158 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~---lvaIs~~s~----~~i~~f~~~~~~p-fpil 158 (222)
|++|...|||+|++-.+.|.+ .|+. +..|..+.. +..+++.+.++.. .|.+
T Consensus 21 vv~f~~~~Cp~C~~~~~~L~~-------~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v 79 (114)
T 2hze_A 21 VTIFVKYTCPFCRNALDILNK-------FSFKRGAYEIVDIKEFKPENELRDYFEQITGGKTVPRI 79 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHTT-------SCBCTTSEEEEEGGGSSSHHHHHHHHHHHHSCCSSCEE
T ss_pred EEEEEeCCChhHHHHHHHHHH-------cCCCcCceEEEEccCCCChHHHHHHHHHHhCCCCcCEE
Confidence 455678999999976665544 4444 555544321 3334556666654 5643
No 257
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=94.87 E-value=0.028 Score=52.22 Aligned_cols=43 Identities=12% Similarity=0.094 Sum_probs=35.2
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
.+..|.+|+..|||+|+...+.|.++..+.. ++.+..|..+..
T Consensus 117 ~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~~ 159 (521)
T 1hyu_A 117 GDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGTF 159 (521)
T ss_dssp SCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTTC
T ss_pred CCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechhh
Confidence 5678999999999999999999988876653 688888877643
No 258
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=94.69 E-value=0.13 Score=35.86 Aligned_cols=52 Identities=10% Similarity=-0.022 Sum_probs=33.4
Q ss_pred EEEEcCC----CChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC------CHHHHHHHHHHcCCC------Cceee
Q 027527 101 VAFARHF----GCVLCRKRADYLAAKKDVMDASGVALVLIGPG------SVEQARTFSEQTKFK------GEVYA 159 (222)
Q Consensus 101 VvF~R~~----~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~------s~~~i~~f~~~~~~p------fpil~ 159 (222)
|++|... +||+|++-...| ++.|+..-.|..+ +++..+++.+.++.. +|.+.
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L-------~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~ 69 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLL-------TVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVF 69 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHH-------HHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEE
T ss_pred EEEEEeCCCCCcCccHHHHHHHH-------HHcCCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEE
Confidence 4456678 999999654444 4456666666555 455556677777765 77544
No 259
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=94.65 E-value=0.079 Score=38.44 Aligned_cols=52 Identities=12% Similarity=0.132 Sum_probs=31.8
Q ss_pred EEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH-HHHHHHHHHc-CCC-Ccee
Q 027527 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQARTFSEQT-KFK-GEVY 158 (222)
Q Consensus 100 vVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~-~~i~~f~~~~-~~p-fpil 158 (222)
-|+.|...|||+|++-...|.+ .|+....|..+.. +..+++.+.+ +.. +|.+
T Consensus 17 ~v~vy~~~~Cp~C~~ak~~L~~-------~~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~i 71 (99)
T 3qmx_A 17 KIEIYTWSTCPFCMRALALLKR-------KGVEFQEYCIDGDNEAREAMAARANGKRSLPQI 71 (99)
T ss_dssp CEEEEECTTCHHHHHHHHHHHH-------HTCCCEEEECTTCHHHHHHHHHHTTTCCCSCEE
T ss_pred CEEEEEcCCChhHHHHHHHHHH-------CCCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEE
Confidence 4556789999999987666654 3555555555543 4444555554 543 5633
No 260
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=94.59 E-value=0.07 Score=38.99 Aligned_cols=51 Identities=16% Similarity=0.128 Sum_probs=28.6
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCE--EEEEcCC--CHHHHHH-HHHHcCCC-Ccee
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVA--LVLIGPG--SVEQART-FSEQTKFK-GEVY 158 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~--lvaIs~~--s~~~i~~-f~~~~~~p-fpil 158 (222)
|++|...|||+|++-...|.+ .|+. .+-|..+ +...+++ +.+.++.. +|.+
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~-------~~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~i 77 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKR-------LGVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNV 77 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEE
T ss_pred EEEEECCCChhHHHHHHHHHH-------cCCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEE
Confidence 455778999999976655554 3444 4444433 1234444 43444654 5633
No 261
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=94.57 E-value=0.095 Score=36.50 Aligned_cols=56 Identities=13% Similarity=0.162 Sum_probs=34.2
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHH----HHHHHHHcCC-CCceeecC
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ----ARTFSEQTKF-KGEVYADP 161 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~----i~~f~~~~~~-pfpil~Dp 161 (222)
|++|...|||+|++-...|.+.- .....+-|...+.+. ..++.+.++. ..|.+.+.
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~g-----i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~~ 74 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREG-----VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVKG 74 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHT-----CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEET
T ss_pred EEEEECCCChHHHHHHHHHHHcC-----CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEEC
Confidence 55678899999998666555431 223455555434322 3677777774 47876663
No 262
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=94.51 E-value=0.017 Score=43.96 Aligned_cols=43 Identities=12% Similarity=0.254 Sum_probs=29.0
Q ss_pred eEEEEEEcCCCChhHHHHHHHHHHhHHHHH-hCCCEEEEEcCCC
Q 027527 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMD-ASGVALVLIGPGS 140 (222)
Q Consensus 98 ~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~-~~gv~lvaIs~~s 140 (222)
..+||.|++.||++|++.-+.+...++.-. ...+.++-|..+.
T Consensus 19 ~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~ 62 (116)
T 3dml_A 19 ELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRD 62 (116)
T ss_dssp CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTS
T ss_pred CCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCC
Confidence 568888999999999998777666544321 1235566665553
No 263
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=94.51 E-value=0.065 Score=41.84 Aligned_cols=67 Identities=13% Similarity=0.122 Sum_probs=52.4
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC----CHHHHHHHHHHcCCCCceeecCChHHHHHcCCccc
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~----s~~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~ 174 (222)
|.+|...+|+.|++-...|. ++|+..-.|... +.++++++..+.++|..-+.+.....|+.+|+...
T Consensus 4 itiY~~p~C~~crkak~~L~-------~~gi~~~~idi~~~~~~~~eL~~~~~~~g~p~~~l~n~~~~~yk~l~l~~~ 74 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMIR-------NSGTEPTIILYLENPPSRDELVKLIADMGISVRALLRKNVEPYEQLGLAED 74 (141)
T ss_dssp CEEECCTTCHHHHHHHHHHH-------HTTCCCEEECTTTSCCCHHHHHHHHHHHTSCHHHHBCSSSHHHHHTTTTSS
T ss_pred EEEEECCCChHHHHHHHHHH-------HcCCCEEEEECCCCCccHHHHHHHhcccCCCHHHhccCCchhHHhcCCccc
Confidence 56788999999997665554 566665555443 45899999999999987777999999999998764
No 264
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=94.23 E-value=0.031 Score=44.91 Aligned_cols=39 Identities=31% Similarity=0.458 Sum_probs=25.8
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHH---HHhHHHHHhCCCEEEEE
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLI 136 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L---~~~~~~l~~~gv~lvaI 136 (222)
.+++||.|+ .+|||+|++..+.+ .++.+++.+ +++++-+
T Consensus 14 ~~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~ 55 (189)
T 3l9v_A 14 DAPAVVEFF-SFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKY 55 (189)
T ss_dssp TCCSEEEEE-CTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEE
T ss_pred CCCEEEEEE-CCCChhHHHHhHhccchHHHHHhCCC-CCEEEEE
Confidence 455666555 99999999988876 344444432 4666555
No 265
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.20 E-value=0.11 Score=39.41 Aligned_cols=49 Identities=8% Similarity=0.043 Sum_probs=30.1
Q ss_pred EcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCC----HHHHHHHHHHcCCC-Cceee
Q 027527 104 ARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS----VEQARTFSEQTKFK-GEVYA 159 (222)
Q Consensus 104 ~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s----~~~i~~f~~~~~~p-fpil~ 159 (222)
|...|||+|++-.+.|.+. ++....|..+. ++..+++.+.+++. +|.+.
T Consensus 32 f~~~~Cp~C~~~~~~L~~~-------~i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~ 85 (130)
T 2cq9_A 32 FSKTSCSYCTMAKKLFHDM-------NVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF 85 (130)
T ss_dssp EECSSCSHHHHHHHHHHHH-------TCCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE
T ss_pred EEcCCChHHHHHHHHHHHc-------CCCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE
Confidence 7889999999876666553 44444454442 33334566666755 67443
No 266
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=94.10 E-value=0.067 Score=38.72 Aligned_cols=51 Identities=10% Similarity=0.036 Sum_probs=32.4
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCC-HHHHHHHHHHc-CC-CCcee
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQT-KF-KGEVY 158 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s-~~~i~~f~~~~-~~-pfpil 158 (222)
|+.|...|||+|.+-- .-|++.|+...-|..+. ++..+.+.+.. |. ..|.+
T Consensus 6 I~vYs~~~Cp~C~~aK-------~~L~~~gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I 59 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLK-------TALTANRIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTV 59 (92)
T ss_dssp EEEEECTTCSSHHHHH-------HHHHHTTCCCEEEETTTCHHHHHHHHHHSSSSSCSCEE
T ss_pred EEEEcCCCCHhHHHHH-------HHHHhcCCceEEEEcCCCHHHHHHHHHHcCCCCEeCEE
Confidence 5567789999999643 33456788877777764 44445555543 33 46744
No 267
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=94.03 E-value=0.097 Score=39.85 Aligned_cols=51 Identities=16% Similarity=0.150 Sum_probs=28.5
Q ss_pred EEEEcCCCChhHHHH-HHHHHHhHHHHHhCC---CEEEEE--cCCC--HHHHHHHHHHcCCC-Ccee
Q 027527 101 VAFARHFGCVLCRKR-ADYLAAKKDVMDASG---VALVLI--GPGS--VEQARTFSEQTKFK-GEVY 158 (222)
Q Consensus 101 VvF~R~~~Cp~C~~e-l~~L~~~~~~l~~~g---v~lvaI--s~~s--~~~i~~f~~~~~~p-fpil 158 (222)
|++|...|||+|++- ...|. +.| +....| ..++ .+..++..+.++.+ .|.+
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~-------~~~~~~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~v 98 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQ-------ELNVPKSKALVLELDEMSNGSEIQDALEEISGQKTVPNV 98 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHT-------TSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE
T ss_pred EEEEECCCCCchHHHHHHHHH-------hcCccCCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEE
Confidence 455678999999976 44443 334 444444 4333 22334566666753 6643
No 268
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=93.93 E-value=0.17 Score=34.49 Aligned_cols=54 Identities=13% Similarity=0.096 Sum_probs=32.5
Q ss_pred EEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCE--EEEEcCCCH-HHHHHHHHHcCC------CCceeec
Q 027527 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVA--LVLIGPGSV-EQARTFSEQTKF------KGEVYAD 160 (222)
Q Consensus 100 vVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~--lvaIs~~s~-~~i~~f~~~~~~------pfpil~D 160 (222)
.|++|...|||+|++-...| ++.|+. ++-|..+.. ....++.+.++. ..|.+..
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L-------~~~~i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i 67 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWF-------EENNIAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI 67 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHH-------HHTTCCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE
T ss_pred EEEEEEcCCChhHHHHHHHH-------HHcCCCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE
Confidence 36778889999999755444 344544 444433322 244667777776 4675544
No 269
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=93.85 E-value=0.12 Score=39.96 Aligned_cols=55 Identities=11% Similarity=0.214 Sum_probs=34.6
Q ss_pred EEEEEcC----CCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC-CHHHHHHHHHHcCCC-Cc-eeecC
Q 027527 100 VVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQTKFK-GE-VYADP 161 (222)
Q Consensus 100 vVvF~R~----~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~-s~~~i~~f~~~~~~p-fp-il~Dp 161 (222)
|++|... .|||+|++-...|. +.|+....|..+ +++..+++.+.++.+ +| |+.|-
T Consensus 37 Vvvy~ks~~~~~~Cp~C~~ak~~L~-------~~gv~y~~vdI~~d~~~~~~L~~~~G~~tvP~VfI~G 98 (135)
T 2wci_A 37 ILLYMKGSPKLPSCGFSAQAVQALA-------ACGERFAYVDILQNPDIRAELPKYANWPTFPQLWVDG 98 (135)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHHH-------TTCSCCEEEEGGGCHHHHHHHHHHHTCCSSCEEEETT
T ss_pred EEEEEEecCCCCCCccHHHHHHHHH-------HcCCceEEEECCCCHHHHHHHHHHHCCCCcCEEEECC
Confidence 5667665 79999997655554 446665555554 455555666666765 66 45553
No 270
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=93.75 E-value=0.11 Score=45.33 Aligned_cols=56 Identities=7% Similarity=0.070 Sum_probs=40.9
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p 154 (222)
.+.++++|...||+.|++.++.+.++..+++.. +.++.|.++.. .-...++++++.
T Consensus 135 ~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~~~-~~~~~~~~fgi~ 190 (361)
T 3uem_A 135 IKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSDHT-DNQRILEFFGLK 190 (361)
T ss_dssp CCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTTSG-GGHHHHHHTTCC
T ss_pred CCcEEEEEEeCCchhHHHHHHHHHHHHHHccCc-eEEEEecCChH-HHHHHHHHcCCC
Confidence 356677888999999999999999999998654 88888887732 123334444543
No 271
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=93.51 E-value=0.094 Score=39.41 Aligned_cols=44 Identities=7% Similarity=-0.005 Sum_probs=34.1
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
....|++.||+. |.+|+...+.|.++..+++.. +.++-|..+..
T Consensus 22 ~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~~ 65 (133)
T 2djk_A 22 AGIPLAYIFAET-AEERKELSDKLKPIAEAQRGV-INFGTIDAKAF 65 (133)
T ss_dssp TTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTTT
T ss_pred CCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHHh
Confidence 344577888888 899999999999998887543 78888877654
No 272
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=93.37 E-value=0.23 Score=36.58 Aligned_cols=51 Identities=14% Similarity=0.196 Sum_probs=28.8
Q ss_pred EEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC---CHHHHHH-HHHHcCCC-Cc-eeec
Q 027527 103 FARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG---SVEQART-FSEQTKFK-GE-VYAD 160 (222)
Q Consensus 103 F~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~---s~~~i~~-f~~~~~~p-fp-il~D 160 (222)
.|...|||+|.+-...|.+ .|+..-.|..+ +...+++ +.+.++.+ +| ++.|
T Consensus 21 vy~~~~Cp~C~~ak~~L~~-------~~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi~ 77 (114)
T 3h8q_A 21 IFSKSYCPHSTRVKELFSS-------LGVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFVN 77 (114)
T ss_dssp EEECTTCHHHHHHHHHHHH-------TTCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEET
T ss_pred EEEcCCCCcHHHHHHHHHH-------cCCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEEC
Confidence 3677999999865555544 45544444443 3344444 44555654 66 4443
No 273
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=93.34 E-value=0.29 Score=35.13 Aligned_cols=56 Identities=13% Similarity=0.057 Sum_probs=31.1
Q ss_pred EEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHH----HHHHcCC-CCceeec
Q 027527 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART----FSEQTKF-KGEVYAD 160 (222)
Q Consensus 100 vVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~----f~~~~~~-pfpil~D 160 (222)
-|++|...|||+|++-...|.+.. .....+-|..++.+...+ +.+.++. ..|.+..
T Consensus 23 ~v~ly~~~~Cp~C~~ak~~L~~~~-----i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i 83 (103)
T 3nzn_A 23 KVIMYGLSTCVWCKKTKKLLTDLG-----VDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII 83 (103)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHT-----BCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE
T ss_pred eEEEEcCCCCchHHHHHHHHHHcC-----CCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE
Confidence 355678999999998776665532 123344444434433333 3333454 3675544
No 274
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=93.08 E-value=0.18 Score=39.31 Aligned_cols=49 Identities=8% Similarity=0.043 Sum_probs=29.3
Q ss_pred EcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCC----HHHHHHHHHHcCCC-Cceee
Q 027527 104 ARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS----VEQARTFSEQTKFK-GEVYA 159 (222)
Q Consensus 104 ~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s----~~~i~~f~~~~~~p-fpil~ 159 (222)
|...|||+|++-.+.|.+. |+....|..+. ++..+++.+.+++. +|.+.
T Consensus 54 f~~~~Cp~C~~~k~~L~~~-------~i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if 107 (146)
T 2ht9_A 54 FSKTSCSYCTMAKKLFHDM-------NVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF 107 (146)
T ss_dssp EECTTCHHHHHHHHHHHHH-------TCCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE
T ss_pred EECCCChhHHHHHHHHHHc-------CCCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE
Confidence 7889999999876666543 34433343331 33334566666755 66443
No 275
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=93.07 E-value=0.024 Score=46.38 Aligned_cols=40 Identities=20% Similarity=0.190 Sum_probs=28.3
Q ss_pred eEEEEEEcCCCChhHHHHHHHH---HHhHHHHHhCCCEEEEEcC
Q 027527 98 KAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGP 138 (222)
Q Consensus 98 ~vvVvF~R~~~Cp~C~~el~~L---~~~~~~l~~~gv~lvaIs~ 138 (222)
+++|+-|+.+|||+|+...+.| .++.+++. .++++.-+-.
T Consensus 114 ~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~-~~v~~~~~~v 156 (197)
T 1un2_A 114 APQVLEFFSFFCPHCYQFEEVLHISDNVKKKLP-EGVKMTKYHV 156 (197)
T ss_dssp CCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSC-TTCCEEEEEC
T ss_pred CCEEEEEECCCChhHHHhCcccccHHHHHHHCC-CCCEEEEecc
Confidence 3566677779999999998887 76666664 3566655544
No 276
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=92.95 E-value=0.024 Score=49.76 Aligned_cols=26 Identities=15% Similarity=0.349 Sum_probs=21.8
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHH
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVM 126 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l 126 (222)
++.|.+.|||+|++..+.+.+..+++
T Consensus 201 vV~F~A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 201 GTMYGAYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp CEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 56778999999999999988876554
No 277
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=92.86 E-value=0.073 Score=45.12 Aligned_cols=56 Identities=13% Similarity=0.043 Sum_probs=37.9
Q ss_pred CCCeEEEEEEcC--CCChhHHHHHHHHHHhHHHHHh-CCCEEEEEcCCC--HHHHHHHHHHcCCC
Q 027527 95 KDRKAVVAFARH--FGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGS--VEQARTFSEQTKFK 154 (222)
Q Consensus 95 ~~~~vvVvF~R~--~~Cp~C~~el~~L~~~~~~l~~-~gv~lvaIs~~s--~~~i~~f~~~~~~p 154 (222)
+..+.+||.|++ .||+ ..+.+.++..++.. .++.+..|.+++ -..-...++++++.
T Consensus 20 ~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~ 80 (240)
T 2qc7_A 20 PKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLD 80 (240)
T ss_dssp GGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCC
T ss_pred cCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCC
Confidence 344567788888 9999 66777777777754 468888888654 22234456666766
No 278
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=92.79 E-value=0.26 Score=37.11 Aligned_cols=56 Identities=20% Similarity=0.265 Sum_probs=32.9
Q ss_pred EEEEEEcC----CCChhHHHHHHHHHHhHHHHHhCCCE---EEEEcCC-CHHHHHHHHHHcCCC-Cc-eeecC
Q 027527 99 AVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVA---LVLIGPG-SVEQARTFSEQTKFK-GE-VYADP 161 (222)
Q Consensus 99 vvVvF~R~----~~Cp~C~~el~~L~~~~~~l~~~gv~---lvaIs~~-s~~~i~~f~~~~~~p-fp-il~Dp 161 (222)
.|++|-.. .|||+|++-...|.+ .|+. +..+..+ +++..+.+.+..+.+ +| |+.|-
T Consensus 17 ~Vvvfsk~t~~~p~Cp~C~~ak~lL~~-------~gv~~~~~~~~dv~~~~~~~~~l~~~sg~~tvP~vfI~g 82 (121)
T 3gx8_A 17 PVVLFMKGTPEFPKCGFSRATIGLLGN-------QGVDPAKFAAYNVLEDPELREGIKEFSEWPTIPQLYVNK 82 (121)
T ss_dssp SEEEEESBCSSSBCTTHHHHHHHHHHH-------HTBCGGGEEEEECTTCHHHHHHHHHHHTCCSSCEEEETT
T ss_pred CEEEEEeccCCCCCCccHHHHHHHHHH-------cCCCcceEEEEEecCCHHHHHHHHHHhCCCCCCeEEECC
Confidence 36777776 499999976555544 3554 4444444 334444455555655 66 55554
No 279
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=92.68 E-value=0.27 Score=37.03 Aligned_cols=56 Identities=18% Similarity=0.208 Sum_probs=31.8
Q ss_pred EEEEEEcC----CCChhHHHHHHHHHHhHHHHHhCCCE-EEEEcCCC-HHHHHHHHHHcCCC-Cc-eeecC
Q 027527 99 AVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVA-LVLIGPGS-VEQARTFSEQTKFK-GE-VYADP 161 (222)
Q Consensus 99 vvVvF~R~----~~Cp~C~~el~~L~~~~~~l~~~gv~-lvaIs~~s-~~~i~~f~~~~~~p-fp-il~Dp 161 (222)
.|++|-.. .|||+|.+-...|. +.|+. ...|..+. ++..+.+.+..+.+ +| |+.|-
T Consensus 21 ~Vvvfsk~t~~~p~Cp~C~~ak~lL~-------~~gv~~~~~vdV~~d~~~~~~l~~~tg~~tvP~vfI~g 84 (118)
T 2wem_A 21 KVVVFLKGTPEQPQCGFSNAVVQILR-------LHGVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYLNG 84 (118)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHH-------HTTCCCCEEEESSSCHHHHHHHHHHHTCCSSCEEEETT
T ss_pred CEEEEEecCCCCCccHHHHHHHHHHH-------HcCCCCCEEEEcCCCHHHHHHHHHHhCCCCcCeEEECC
Confidence 36677776 49999997555444 44553 44444443 33334444544544 66 55554
No 280
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=92.52 E-value=0.24 Score=36.61 Aligned_cols=60 Identities=8% Similarity=0.121 Sum_probs=33.9
Q ss_pred cCCCeEEEEEEcC----CCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC-CHHHHHHHHHHcCCC-Cc-eeecC
Q 027527 94 WKDRKAVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQTKFK-GE-VYADP 161 (222)
Q Consensus 94 ~~~~~vvVvF~R~----~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~-s~~~i~~f~~~~~~p-fp-il~Dp 161 (222)
.+..+ |++|..+ .|||+|++-...|. +.|+....+..+ +++..+++.+..+.+ +| |+.|-
T Consensus 13 i~~~~-Vvlf~kg~~~~~~Cp~C~~ak~~L~-------~~gi~y~~~di~~d~~~~~~l~~~~g~~tvP~ifi~g 79 (111)
T 3zyw_A 13 THAAP-CMLFMKGTPQEPRCGFSKQMVEILH-------KHNIQFSSFDIFSDEEVRQGLKAYSSWPTYPQLYVSG 79 (111)
T ss_dssp HTSSS-EEEEESBCSSSBSSHHHHHHHHHHH-------HTTCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEEETT
T ss_pred HhcCC-EEEEEecCCCCCcchhHHHHHHHHH-------HcCCCeEEEECcCCHHHHHHHHHHHCCCCCCEEEECC
Confidence 33444 5566552 89999997665554 445555555443 344444455555654 66 55553
No 281
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=92.31 E-value=0.34 Score=35.48 Aligned_cols=56 Identities=14% Similarity=0.112 Sum_probs=32.2
Q ss_pred EEEEEEcC----CCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC-CHHHHHHHHHHcCCC-Cc-eeecC
Q 027527 99 AVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQTKFK-GE-VYADP 161 (222)
Q Consensus 99 vvVvF~R~----~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~-s~~~i~~f~~~~~~p-fp-il~Dp 161 (222)
.|++|-.. .|||+|++-...|.+ .|+....|..+ +++..+++.+..+.. +| |+.|-
T Consensus 19 ~Vvvy~k~t~~~p~Cp~C~~ak~~L~~-------~gi~~~~~dI~~~~~~~~~l~~~~g~~tvP~ifi~g 81 (109)
T 3ipz_A 19 KVVLFMKGTRDFPMCGFSNTVVQILKN-------LNVPFEDVNILENEMLRQGLKEYSNWPTFPQLYIGG 81 (109)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHH-------TTCCCEEEEGGGCHHHHHHHHHHHTCSSSCEEEETT
T ss_pred CEEEEEecCCCCCCChhHHHHHHHHHH-------cCCCcEEEECCCCHHHHHHHHHHHCCCCCCeEEECC
Confidence 35667666 499999976555554 45555555443 344444454544544 55 55553
No 282
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=92.28 E-value=0.26 Score=41.93 Aligned_cols=56 Identities=7% Similarity=0.007 Sum_probs=38.0
Q ss_pred CCCeEEEEEEc--CCCChhHHHHHHHHHHhHHHHHh--CCCEEEEEcCCC--HHHHHHHHHHcCCC
Q 027527 95 KDRKAVVAFAR--HFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGS--VEQARTFSEQTKFK 154 (222)
Q Consensus 95 ~~~~vvVvF~R--~~~Cp~C~~el~~L~~~~~~l~~--~gv~lvaIs~~s--~~~i~~f~~~~~~p 154 (222)
...+.+||.|+ +.||+ ..+.+.++..++.. ..+.+.-|.+++ .+.....++++++.
T Consensus 31 ~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~ 92 (248)
T 2c0g_A 31 ERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVD 92 (248)
T ss_dssp TTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCC
T ss_pred hcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCC
Confidence 34456777777 99998 67777777777754 468888898776 11134456666666
No 283
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=92.01 E-value=0.47 Score=35.47 Aligned_cols=64 Identities=14% Similarity=0.159 Sum_probs=47.4
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcC----CCHHHHHHHHHHcCCCCceeecCChHHHHHcCCcc
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~----~s~~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~ 173 (222)
|.+|-..+|+.|++-...|.+ +|+..-.+.. .+.++++++.++.++ .-+.+.....|+.+|...
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~~~~~~~~l~~~~~~~g~--~~l~n~~~~~~k~l~~~~ 74 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLED-------HGIDYTFHDYKKEGLDAETLDRFLKTVPW--EQLLNRAGTTFRKLPEDV 74 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------HTCCEEEEEHHHHCCCHHHHHHHHHHSCG--GGTBCSSSHHHHHSCHHH
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCcEEEEeeeCCCCCHHHHHHHHHHcCh--HhhccCCchhhHhcCchh
Confidence 667788999999976666554 4666544433 345888999988875 556789999999999754
No 284
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=91.87 E-value=0.16 Score=37.80 Aligned_cols=64 Identities=13% Similarity=0.164 Sum_probs=47.5
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC----CHHHHHHHHHHcCCCCceeecCChHHHHHcCCcc
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~----s~~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~ 173 (222)
|.+|-..+|+.|++-...|. ++|+..-.|... +.++++++.++.|+ .-+.+.....|+.+|...
T Consensus 2 i~iY~~~~C~~C~kak~~L~-------~~gi~~~~~di~~~~~~~~~l~~~~~~~g~--~~l~n~~~~~~k~l~~~~ 69 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLD-------EHKVAYDFHDYKAVGIDREHLRRWCAEHGW--QTVLNRAGTTFRKLDEAQ 69 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHH-------HTTCCEEEEEHHHHCCCHHHHHHHHHHHCH--HHHBCTTSHHHHTSCHHH
T ss_pred EEEEECCCChHHHHHHHHHH-------HCCCceEEEeecCCCCCHHHHHHHHHhCCh--HHhccCCcHhHHhcCccc
Confidence 45678899999997665554 467775555432 34889999988874 666788999999999754
No 285
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=91.26 E-value=0.1 Score=41.77 Aligned_cols=28 Identities=21% Similarity=0.344 Sum_probs=22.8
Q ss_pred EEEEEEcCCCChhHHHHHHHHHHhHHHH
Q 027527 99 AVVAFARHFGCVLCRKRADYLAAKKDVM 126 (222)
Q Consensus 99 vvVvF~R~~~Cp~C~~el~~L~~~~~~l 126 (222)
+.|+-|..+|||+|++..+.|.++.+++
T Consensus 24 ~~vvef~d~~Cp~C~~~~~~~~~~~~~~ 51 (185)
T 3feu_A 24 APVTEVFALSCGHCRNMENFLPVISQEA 51 (185)
T ss_dssp CSEEEEECTTCHHHHHHGGGHHHHHHHH
T ss_pred CEEEEEECCCChhHHHhhHHHHHHHHHh
Confidence 4455556899999999999888888877
No 286
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=91.06 E-value=0.66 Score=32.59 Aligned_cols=59 Identities=3% Similarity=-0.073 Sum_probs=31.4
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCC-HHHHHHHHHHcCC---CCc-eeec
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKF---KGE-VYAD 160 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s-~~~i~~f~~~~~~---pfp-il~D 160 (222)
|+.|...+||+|.- -.+-.+...-|++.|+....|..+. ++..+++.+..+. .+| |+.|
T Consensus 4 v~ly~~~~C~~c~~-~~~~~~ak~~L~~~~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~ifi~ 67 (93)
T 1t1v_A 4 LRVYSTSVTGSREI-KSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGNPKATPPQIVNG 67 (93)
T ss_dssp EEEEECSSCSCHHH-HHHHHHHHHHHHHTTCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEEET
T ss_pred EEEEEcCCCCCchh-hHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEEEC
Confidence 44556899999930 0000011223456777766666653 3444556666664 366 4444
No 287
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.97 E-value=0.81 Score=33.55 Aligned_cols=49 Identities=6% Similarity=-0.041 Sum_probs=28.5
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH-HHHHHHHHH
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQARTFSEQ 150 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~-~~i~~f~~~ 150 (222)
|++|...+||+|.. -..-++...-|++.|+....|..+.. +..+++.+.
T Consensus 10 V~vy~~~~C~~C~~-~~~~~~ak~~L~~~gi~y~~vdI~~~~~~~~~l~~~ 59 (111)
T 2ct6_A 10 IRVFIASSSGFVAI-KKKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKN 59 (111)
T ss_dssp EEEEECSSCSCHHH-HHHHHHHHHHHHHTTCCEEEEETTTCHHHHHHHHHS
T ss_pred EEEEEcCCCCCccc-chhHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHH
Confidence 45566899999983 01111223345567888777777644 444445555
No 288
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=90.63 E-value=0.28 Score=38.21 Aligned_cols=28 Identities=18% Similarity=0.297 Sum_probs=23.2
Q ss_pred CCCeEEEEEEcCCCChhHHHHHHHHHHh
Q 027527 95 KDRKAVVAFARHFGCVLCRKRADYLAAK 122 (222)
Q Consensus 95 ~~~~vvVvF~R~~~Cp~C~~el~~L~~~ 122 (222)
++.++.|+.|-.++||+|++..+.|.++
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l 39 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKM 39 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTC
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhc
Confidence 3567888888999999999988887654
No 289
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=88.99 E-value=0.33 Score=38.93 Aligned_cols=42 Identities=10% Similarity=-0.033 Sum_probs=31.1
Q ss_pred CCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEE
Q 027527 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (222)
Q Consensus 95 ~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaI 136 (222)
++.|+.|+.|-.+.||+|.+..+.+.+..++.....++++.-
T Consensus 12 g~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r 53 (182)
T 3gn3_A 12 GHGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIR 53 (182)
T ss_dssp ECCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEE
T ss_pred CCCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEE
Confidence 356899999999999999998888877666542234665543
No 290
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=88.90 E-value=0.73 Score=35.48 Aligned_cols=38 Identities=21% Similarity=0.327 Sum_probs=26.5
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEE
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVL 135 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lva 135 (222)
++++||.|+ .+.||+|.+.-+.+.++.+++.+ ++.++-
T Consensus 21 ~~~~vvEf~-dy~Cp~C~~~~~~~~~l~~~~~~-~~~~~~ 58 (184)
T 4dvc_A 21 SSPVVSEFF-SFYCPHCNTFEPIIAQLKQQLPE-GAKFQK 58 (184)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHTSCT-TCEEEE
T ss_pred CCCEEEEEE-CCCCHhHHHHhHHHHHHHhhcCC-ceEEEE
Confidence 455666555 79999999988888777776644 344443
No 291
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=88.16 E-value=1.5 Score=42.03 Aligned_cols=115 Identities=21% Similarity=0.252 Sum_probs=68.9
Q ss_pred CccccCcCCCcEEec-CCCCeEeCCCccC--CCeEEEEEEcCCCChhHHHHHHHHHHhHH-------HHH------hCCC
Q 027527 68 SEDTKNLLDTVKVYD-VNGNAIPISDLWK--DRKAVVAFARHFGCVLCRKRADYLAAKKD-------VMD------ASGV 131 (222)
Q Consensus 68 ~~~~g~~apdf~L~D-~~G~~v~Lsdl~~--~~~vvVvF~R~~~Cp~C~~el~~L~~~~~-------~l~------~~gv 131 (222)
...+|..+|++.|.. .+|+++.|.+++. ++..+|+|--..-.+.+.+.+..+.+... ++. +.-+
T Consensus 478 ~~~~G~r~p~~~~~~~~~g~~~~l~~~l~~~g~~~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 557 (665)
T 1pn0_A 478 NCVVGTRFKSQPVVRHSEGLWMHFGDRLVTDGRFRIIVFAGKATDATQMSRIKKFAAYLDSENSVISRYTPKGADRNSRI 557 (665)
T ss_dssp TSCTTSBCCCCEEEETTTTEEEEGGGGCCCSSCEEEEEEEECTTSHHHHHHHHHHHHHHHSTTSHHHHHSBTTSCTTSSE
T ss_pred CCCCcCCCCCCeEEecCCCcEEEHhHhhccCCCEEEEEecCCcccchhHHHHHHHHHHhhccccHHhhcCCcccCcccee
Confidence 346899999999976 5899999999885 45666666544333445555555554432 221 1127
Q ss_pred EEEEEcCCCHHHH--HHHHH---HcCCCC-ceeec------CChHHHHHcCCcc--ccceeeccc
Q 027527 132 ALVLIGPGSVEQA--RTFSE---QTKFKG-EVYAD------PNHSSYEALSFVS--GVLVTFTPK 182 (222)
Q Consensus 132 ~lvaIs~~s~~~i--~~f~~---~~~~pf-pil~D------pd~~lyk~lGl~~--~~~~~~~P~ 182 (222)
.++.|.......+ ..+-+ ..++++ .+|.| ++..+|+.||+.. +....+.|.
T Consensus 558 ~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~g~~vlvRPD 622 (665)
T 1pn0_A 558 DVITIHSCHRDDIEMHDFPAPALHPKWQYDFIYADCDSWHHPHPKSYQAWGVDETKGAVVVVRPD 622 (665)
T ss_dssp EEEEEESSCTTSCCGGGSCTTTTSCTTCCSSEEECSCCSSSCCCCHHHHHTBCTTTCEEEEECTT
T ss_pred EEEEEecCCCCccchhhCCHHHcCcccchheEeecCcccccccccHHHHcCCCCCCceEEEECCC
Confidence 7888865543221 11110 002233 57888 4677999999976 444455675
No 292
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=87.93 E-value=0.83 Score=35.66 Aligned_cols=39 Identities=13% Similarity=0.225 Sum_probs=26.3
Q ss_pred eEEEEEEcCCCChhHHHHHHHH-HHhHHHHHhCCCEEEEEc
Q 027527 98 KAVVAFARHFGCVLCRKRADYL-AAKKDVMDASGVALVLIG 137 (222)
Q Consensus 98 ~vvVvF~R~~~Cp~C~~el~~L-~~~~~~l~~~gv~lvaIs 137 (222)
+++++.|..+.||+|....+.| .++.+++. ..+++..+.
T Consensus 18 ~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~-~~v~~~~~~ 57 (195)
T 3c7m_A 18 DKTLIKVFSYACPFCYKYDKAVTGPVSEKVK-DIVAFTPFH 57 (195)
T ss_dssp TTEEEEEECTTCHHHHHHHHHTHHHHHHHTT-TTCEEEEEE
T ss_pred CcEEEEEEeCcCcchhhCcHHHHHHHHHhCC-CceEEEEEe
Confidence 3334445569999999988888 77766553 236666654
No 293
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=87.68 E-value=2.2 Score=32.24 Aligned_cols=57 Identities=18% Similarity=0.211 Sum_probs=33.1
Q ss_pred EEEEEEcC----CCChhHHHHHHHHHHhHHHHHhCCCE-EEEEcCC-CHHHHHHHHHHcCCC-Cc-eeecCC
Q 027527 99 AVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVA-LVLIGPG-SVEQARTFSEQTKFK-GE-VYADPN 162 (222)
Q Consensus 99 vvVvF~R~----~~Cp~C~~el~~L~~~~~~l~~~gv~-lvaIs~~-s~~~i~~f~~~~~~p-fp-il~Dpd 162 (222)
.||+|--. +.||+|.+-..-| ++.|+. ...|..+ +++.-+...+..+++ +| ||.|-+
T Consensus 21 ~VvvF~Kgt~~~P~C~fc~~ak~lL-------~~~gv~~~~~~~v~~~~~~r~~l~~~sg~~TvPqIFI~g~ 85 (118)
T 2wul_A 21 KVVVFLKGTPEQPQCGFSNAVVQIL-------RLHGVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYLNGE 85 (118)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHH-------HHTTCCSCEEEETTSCHHHHHHHHHHHTCCSSCEEEETTE
T ss_pred CEEEEEcCCCCCCCCHHHHHHHHHH-------HHhCCcCeEeecccCCHHHHHHHHHhccCCCCCeEeECCE
Confidence 36777765 4899999755544 344542 3334333 444444555666776 66 676644
No 294
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=86.43 E-value=0.51 Score=37.91 Aligned_cols=38 Identities=18% Similarity=0.221 Sum_probs=26.2
Q ss_pred eEEEEEEcCCCChhHHHHHHHH---HHhHHHHHhCCCEEEEE
Q 027527 98 KAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLI 136 (222)
Q Consensus 98 ~vvVvF~R~~~Cp~C~~el~~L---~~~~~~l~~~gv~lvaI 136 (222)
++.|+-|..++||+|.+.-+.| .++.+++.+ +++++-+
T Consensus 22 ~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~-~v~~~~~ 62 (191)
T 3l9s_A 22 EPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPE-GTKMTKY 62 (191)
T ss_dssp SSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCT-TCCEEEE
T ss_pred CCeEEEEECCCChhHHHhChhccchHHHHHhCCC-CcEEEEE
Confidence 3456677799999999988876 466666543 4555544
No 295
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=85.99 E-value=1.1 Score=35.04 Aligned_cols=41 Identities=12% Similarity=0.290 Sum_probs=29.6
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHH-HhHHHHHh-CCCEEEEE
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYLA-AKKDVMDA-SGVALVLI 136 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L~-~~~~~l~~-~gv~lvaI 136 (222)
+.++.|+.|..+.||+|....+.+. ++.+++.+ ..++++..
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~ 52 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFV 52 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEE
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEE
Confidence 4577888889999999999988884 45556543 34676654
No 296
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=85.50 E-value=0.89 Score=43.19 Aligned_cols=113 Identities=15% Similarity=0.067 Sum_probs=66.0
Q ss_pred ccccCcCCCcEEec-CCCCeEeCCCccC--CCeEEEEEEcCCCChhHH-HHHHHHHHhH--------HHHHh------CC
Q 027527 69 EDTKNLLDTVKVYD-VNGNAIPISDLWK--DRKAVVAFARHFGCVLCR-KRADYLAAKK--------DVMDA------SG 130 (222)
Q Consensus 69 ~~~g~~apdf~L~D-~~G~~v~Lsdl~~--~~~vvVvF~R~~~Cp~C~-~el~~L~~~~--------~~l~~------~g 130 (222)
..+|..+|++.|.. .+|+++.|.+++. ++.++++|- ....+.+. ..+..+.+.. .++.. .=
T Consensus 467 ~~~G~r~p~~~~~~~~~g~~~~l~~~~~~~g~~~ll~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 545 (639)
T 2dkh_A 467 FTVGMRFHSAPVVRVCDAKPVQLGHCGKADGRWRLYAFA-AQNDLAQPESGLLALCRFLEGDAASPLRRFTPAGQDIDSI 545 (639)
T ss_dssp SCTTSBCCCCEEEETTTCCEEEGGGGCCSSSCEEEEEEC-CTTTTTCTTSHHHHHHHHHHHCTTCHHHHHSCTTSCTTSS
T ss_pred CCCcCCCCCCeEEecCCCCEEEHHHhhccCCCEEEEEec-CCCCchhhHHHHHHHHHHHhhCCccHHHhcCCCCCCcCce
Confidence 46799999999976 5899999999885 355666553 32233333 2333333322 12311 12
Q ss_pred CEEEEEcCCCH---------HHHHHHHHHcCC-CC-ceeecCC----hHHHHHcCCcc--ccceeeccc
Q 027527 131 VALVLIGPGSV---------EQARTFSEQTKF-KG-EVYADPN----HSSYEALSFVS--GVLVTFTPK 182 (222)
Q Consensus 131 v~lvaIs~~s~---------~~i~~f~~~~~~-pf-pil~Dpd----~~lyk~lGl~~--~~~~~~~P~ 182 (222)
++++.|..... +..+.+..++++ ++ .+|.|.. ..+|+.||+.+ +....+.|.
T Consensus 546 ~~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~~~g~~v~vRPD 614 (639)
T 2dkh_A 546 FDLRAVFPQAYTEVALETLPALLLPPKGQLGMIDYEKVFSPDLKNAGQDIFELRGIDRQQGALVVVRPD 614 (639)
T ss_dssp EEEEEECSSCGGGCCGGGSCGGGSCEETTTTEECCCSEEECCCSSTTCCHHHHTTBCTTTCEEEEECTT
T ss_pred EEEEEEecCCCCccchhhCcHhhCCcccccccccceeEEeCCCcccccchHHHhCCCCCceEEEEECCC
Confidence 67787866532 122222233343 33 5788842 67999999976 444455675
No 297
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=84.90 E-value=0.95 Score=39.24 Aligned_cols=39 Identities=18% Similarity=0.326 Sum_probs=29.0
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcC
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~ 138 (222)
.+.+|+.|..+.||+|++...+|.+..+ +..+.++.+..
T Consensus 147 gk~~I~vFtDp~CPYCkkl~~~l~~~l~---~~~Vr~i~~Pi 185 (273)
T 3tdg_A 147 KDKILYIVSDPMCPHCQKELTKLRDHLK---ENTVRMVVVGW 185 (273)
T ss_dssp TTCEEEEEECTTCHHHHHHHHTHHHHHH---HCEEEEEECCC
T ss_pred CCeEEEEEECcCChhHHHHHHHHHHHhh---CCcEEEEEeec
Confidence 4566777789999999999999886554 45566666654
No 298
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=83.82 E-value=3.4 Score=31.22 Aligned_cols=59 Identities=7% Similarity=0.076 Sum_probs=32.8
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC-CHHHHHHHH-HHcCCC-Cc-eeecC
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFS-EQTKFK-GE-VYADP 161 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~-s~~~i~~f~-~~~~~p-fp-il~Dp 161 (222)
|+.|...|||+|.+-...|.+... + .....++-|..+ +.+.++++. +.++.+ +| |+.|-
T Consensus 16 Vvvysk~~Cp~C~~ak~lL~~~~~-~-~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~IfI~G 78 (127)
T 3l4n_A 16 IIIFSKSTCSYSKGMKELLENEYQ-F-IPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLLVNG 78 (127)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHEE-E-ESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEETT
T ss_pred EEEEEcCCCccHHHHHHHHHHhcc-c-CCCcEEEEecCCCCHHHHHHHHHHHcCCCCcceEEECC
Confidence 334456999999976666655210 0 122455566554 445666655 444654 66 56554
No 299
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=83.78 E-value=1.3 Score=36.79 Aligned_cols=55 Identities=13% Similarity=0.073 Sum_probs=33.4
Q ss_pred CCeEEEEEEcCCC--ChhHHHHHHHHHHhHHHHHh-CC---CEEEEEcCCCHHHHHHHHHHcCCC
Q 027527 96 DRKAVVAFARHFG--CVLCRKRADYLAAKKDVMDA-SG---VALVLIGPGSVEQARTFSEQTKFK 154 (222)
Q Consensus 96 ~~~vvVvF~R~~~--Cp~C~~el~~L~~~~~~l~~-~g---v~lvaIs~~s~~~i~~f~~~~~~p 154 (222)
+++++|.|| ..| |+.|++..+.+.++.+.... +| +.++.|..++... .++++++.
T Consensus 25 ~~pv~v~~~-~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~---~~~~~gv~ 85 (243)
T 2hls_A 25 VNPVEVHVF-LSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSD---KFSEFKVE 85 (243)
T ss_dssp CSCEEEEEE-ECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHH---HHHHTTCC
T ss_pred CCCEEEEEE-eCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHH---HHHhcCCC
Confidence 356666665 667 99999987777777665321 22 6666666654332 34444544
No 300
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=82.33 E-value=1.8 Score=34.99 Aligned_cols=41 Identities=12% Similarity=0.208 Sum_probs=28.9
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHH-HHhHHHHHh-CCCEEEEE
Q 027527 96 DRKAVVAFARHFGCVLCRKRADYL-AAKKDVMDA-SGVALVLI 136 (222)
Q Consensus 96 ~~~vvVvF~R~~~Cp~C~~el~~L-~~~~~~l~~-~gv~lvaI 136 (222)
+.++.|+.|-.+.||+|.+.-+.+ ..+.+++-+ ..++++..
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~ 70 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFV 70 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEE
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEE
Confidence 568888888999999999877766 344455533 34666654
No 301
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=81.57 E-value=2.1 Score=35.37 Aligned_cols=47 Identities=9% Similarity=0.075 Sum_probs=32.2
Q ss_pred EeCCCccCCCeEEEEEEcCCCChhHHHHHHHH-HHhHHHHHh-CCCEEEEE
Q 027527 88 IPISDLWKDRKAVVAFARHFGCVLCRKRADYL-AAKKDVMDA-SGVALVLI 136 (222)
Q Consensus 88 v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L-~~~~~~l~~-~gv~lvaI 136 (222)
..+++- +.++.|+.|-.+.||+|++.-+.+ .++.+++-+ ..++++..
T Consensus 32 ~~~G~~--~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~ 80 (226)
T 3f4s_A 32 KLLGDP--KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFR 80 (226)
T ss_dssp CEESCT--TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEE
T ss_pred CccCCC--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEE
Confidence 345542 568888888899999999987764 556666633 34565543
No 302
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=80.96 E-value=2.1 Score=34.82 Aligned_cols=48 Identities=10% Similarity=0.001 Sum_probs=32.9
Q ss_pred eEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHH-HHH-hCCCEEEEE
Q 027527 87 AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKD-VMD-ASGVALVLI 136 (222)
Q Consensus 87 ~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~-~l~-~~gv~lvaI 136 (222)
...+++- +.++.|+.|-.+-||+|++..+.+..... ++- ...++++..
T Consensus 7 ~~~~G~~--~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r 56 (205)
T 3gmf_A 7 HHLLGNP--AAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVR 56 (205)
T ss_dssp EEEESCT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEE
T ss_pred CceecCC--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEE
Confidence 3445553 67888999999999999998877765544 553 334555543
No 303
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.06 E-value=4.5 Score=32.36 Aligned_cols=100 Identities=12% Similarity=-0.006 Sum_probs=57.4
Q ss_pred CCCeEEEEEEcCCCChhHHHHHHHHHHh--HHHHHhCCCEEEEEcCCCHHHHH---------------HHH---HHcCCC
Q 027527 95 KDRKAVVAFARHFGCVLCRKRADYLAAK--KDVMDASGVALVLIGPGSVEQAR---------------TFS---EQTKFK 154 (222)
Q Consensus 95 ~~~~vvVvF~R~~~Cp~C~~el~~L~~~--~~~l~~~gv~lvaIs~~s~~~i~---------------~f~---~~~~~p 154 (222)
+++|.++|.+-+.+|+.|.....++=.. ..++-..+..+++....+.+..+ ... +-.++|
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~P 132 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFP 132 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTCS
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCCC
Confidence 3568899999999999999877554221 22333447778888888776322 111 223466
Q ss_pred CceeecCChHHHHHcCCccccceeeccchhHHHHHHHHHHHHh
Q 027527 155 GEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQ 197 (222)
Q Consensus 155 fpil~Dpd~~lyk~lGl~~~~~~~~~P~a~~~~l~~~~~g~r~ 197 (222)
+-++.++++.- +.+-....+...|......+.....-+..
T Consensus 133 ~l~ii~~~~~~---~~vl~~~~G~~~~~~ll~~L~~~~e~~~~ 172 (178)
T 2ec4_A 133 LFLIIMGKRSS---NEVLNVIQGNTTVDELMMRLMAAMEIFTA 172 (178)
T ss_dssp EEEEECCCSSC---CCEEEEECSCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCCCc---eEEEEEEeCCCCHHHHHHHHHHHHHHhhH
Confidence 66777877421 11212222233455555666555554443
No 304
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=79.05 E-value=6.1 Score=29.94 Aligned_cols=51 Identities=8% Similarity=-0.016 Sum_probs=31.5
Q ss_pred EEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC-CHHHHHHHHHHc
Q 027527 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQT 151 (222)
Q Consensus 100 vVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~-s~~~i~~f~~~~ 151 (222)
||+.|-...||.|.-. ..=.+.+.-|+.+||..--|..+ +++.-+++.+..
T Consensus 1 ~V~vYtt~~c~~c~~k-k~c~~aK~lL~~kgV~feEidI~~d~~~r~eM~~~~ 52 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIK-KKQQDVLGFLEANKIGFEEKDIAANEENRKWMRENV 52 (121)
T ss_dssp CEEEEECTTCSCHHHH-HHHHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHS
T ss_pred CEEEEecCCCCCccch-HHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHhc
Confidence 4566779999999410 00112233367888888888776 455555666666
No 305
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=77.65 E-value=3 Score=33.97 Aligned_cols=54 Identities=15% Similarity=0.145 Sum_probs=30.2
Q ss_pred EEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC-Cceeec
Q 027527 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GEVYAD 160 (222)
Q Consensus 100 vVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p-fpil~D 160 (222)
.|++|...|||+|++-...|.+ .|+....|..+.....+++.+.++.. .|.+..
T Consensus 171 ~i~ly~~~~Cp~C~~a~~~L~~-------~~i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~~ 225 (241)
T 1nm3_A 171 SISIFTKPGCPFCAKAKQLLHD-------KGLSFEEIILGHDATIVSVRAVSGRTTVPQVFI 225 (241)
T ss_dssp CEEEEECSSCHHHHHHHHHHHH-------HTCCCEEEETTTTCCHHHHHHHTCCSSSCEEEE
T ss_pred eEEEEECCCChHHHHHHHHHHH-------cCCceEEEECCCchHHHHHHHHhCCCCcCEEEE
Confidence 3556677999999976555553 34444344333222235555566654 665443
No 306
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=74.90 E-value=11 Score=29.71 Aligned_cols=38 Identities=13% Similarity=0.194 Sum_probs=25.9
Q ss_pred eEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEE
Q 027527 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (222)
Q Consensus 98 ~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaI 136 (222)
++.|.+|-.+.||.|....+.+.++.+ +.+.++++.-.
T Consensus 7 ~~~I~~f~D~~CP~C~~~~~~~~~l~~-~~~~~v~v~~~ 44 (216)
T 2in3_A 7 KPVLWYIADPMCSWCWGFAPVIENIRQ-EYSAFLTVKIM 44 (216)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHH-HHTTTCEEEEE
T ss_pred ceeEEEEECCCCchhhcchHHHHHHHh-cCCCCeEEEEe
Confidence 456777889999999966666666554 43445776654
No 307
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=70.81 E-value=8.7 Score=31.00 Aligned_cols=43 Identities=5% Similarity=0.106 Sum_probs=34.3
Q ss_pred CeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCC
Q 027527 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (222)
Q Consensus 97 ~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s 140 (222)
.+.++++|-..||..|.+.+..+.+...+++.. +.++.|..++
T Consensus 131 ~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~~ 173 (227)
T 4f9z_D 131 IQIHLLLIMNKASPEYEENMHRYQKAAKLFQGK-ILFILVDSGM 173 (227)
T ss_dssp CCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETTS
T ss_pred CceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCcc
Confidence 366777777889999999999999988888654 7777777764
No 308
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=69.53 E-value=21 Score=30.63 Aligned_cols=37 Identities=22% Similarity=0.261 Sum_probs=26.6
Q ss_pred eEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEc
Q 027527 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (222)
Q Consensus 98 ~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs 137 (222)
++.|..|...+||+|.+--..|.+...+ .|+..+.+-
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~~---~~vi~l~~~ 79 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQK---GDVVGLSYH 79 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHHH---TSSEEEEEE
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhcc---CCeeeEEEE
Confidence 3788999999999999877777766543 455434443
No 309
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=64.74 E-value=11 Score=26.89 Aligned_cols=54 Identities=7% Similarity=0.068 Sum_probs=41.0
Q ss_pred hHHHHHhCCCEEEEEcCCCHH----HHHHHHHHcCCCCceeecCChHHHHHcCCcccc
Q 027527 122 KKDVMDASGVALVLIGPGSVE----QARTFSEQTKFKGEVYADPNHSSYEALSFVSGV 175 (222)
Q Consensus 122 ~~~~l~~~gv~lvaIs~~s~~----~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~~ 175 (222)
....++..-+++|.+..|.++ .+..+|+++++|+-.|.+...++-++.|.....
T Consensus 23 v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~a~Gk~~~~ 80 (99)
T 3j21_Z 23 TIRLAKTGGAKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEFEGTSVELGTLLGKPFVV 80 (99)
T ss_dssp HHHHHHHTCCSEEEEECCCCHHHHHHHHHHHHHTTCCEEEECCCSCGGGGTTCSTTCS
T ss_pred HHHHHHcCCccEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCCHHHHHHHHCCCCCE
Confidence 344566667889999888663 445678899999877778889999999987653
No 310
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=61.40 E-value=16 Score=26.17 Aligned_cols=52 Identities=6% Similarity=0.045 Sum_probs=39.6
Q ss_pred HHHHHhCCCEEEEEcCCCHH----HHHHHHHHcCCCCceeecCChHHHHHcCCccc
Q 027527 123 KDVMDASGVALVLIGPGSVE----QARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (222)
Q Consensus 123 ~~~l~~~gv~lvaIs~~s~~----~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~ 174 (222)
...++..-+++|.+..|.++ .+..+|+++++|+-.|.+...++-++.|....
T Consensus 25 ~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~vp~~~~~~s~~eLG~a~G~~~~ 80 (101)
T 1w41_A 25 IQYAKMGGAKLIIVARNARPDIKEDIEYYARLSGIPVYEFEGTSVELGTLLGRPHT 80 (101)
T ss_dssp HHHHHHTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESSCHHHHHHHTTCSSC
T ss_pred HHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHhcCCCEEEecCCHHHHHHHhCCCCc
Confidence 44556666889999888663 44567888899876666888999999998754
No 311
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=59.40 E-value=13 Score=29.50 Aligned_cols=36 Identities=8% Similarity=0.176 Sum_probs=27.9
Q ss_pred EEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEE
Q 027527 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (222)
Q Consensus 100 vVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaI 136 (222)
-|.+|..+.||.|..-.+.|.++.+++. .+++|.-.
T Consensus 4 ~I~~~~D~~CP~cy~~~~~l~~l~~~~~-~~v~v~~~ 39 (208)
T 3kzq_A 4 KLYYVHDPMCSWCWGYKPTIEKLKQQLP-GVIQFEYV 39 (208)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSC-TTSEEEEE
T ss_pred EEEEEECCCCchhhhhhHHHHHHHHhCC-CCceEEEE
Confidence 4678889999999998888988888773 35665544
No 312
>3iz5_H 60S ribosomal protein L7A (L7AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_H
Probab=59.38 E-value=29 Score=29.69 Aligned_cols=97 Identities=11% Similarity=0.090 Sum_probs=57.9
Q ss_pred HHHhHHHHHhCCCEEEEEcCC-CHHH----HHHHHHHcCCCCceeecCChHHHHHcCCccccceeec-cch-hHHHHHHH
Q 027527 119 LAAKKDVMDASGVALVLIGPG-SVEQ----ARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFT-PKA-GLKIIQSY 191 (222)
Q Consensus 119 L~~~~~~l~~~gv~lvaIs~~-s~~~----i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~~~~~~~-P~a-~~~~l~~~ 191 (222)
+++.-..++..-.++|+|..| ++.+ +-..|++.++||-++ .....+....|.+.-....+. ... -...+..+
T Consensus 132 vneVTklVE~kKAqLVVIA~DVdPiElV~fLPaLC~k~gVPY~iV-k~KarLG~~vgrKtct~Va~t~v~~eDk~aLakL 210 (258)
T 3iz5_H 132 LNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIV-KGKARLGSIVHKKTASVLCLTTVKNEDKLEFSKI 210 (258)
T ss_dssp HHHHHHHHHTTCEEEEEEESCCSSTHHHHHHHHHHTTTTCCEEEE-SCHHHHHHHTTCSSCCSEEEEESCCSCCHHHHHH
T ss_pred cHHHHHHHHcCcceEEEEeCCCChHHHHhHHHHHHHhcCCCeEEE-CCHHHHHHHhCCccceEEEEEecCHHHHHHHHHH
Confidence 455555566677888888876 3433 345689999999664 566688888898764333332 111 22345566
Q ss_pred HHHHHhhhccccccCCccCCceeeC
Q 027527 192 MEGYRQDWKLSFERDTVSRGGWYDT 216 (222)
Q Consensus 192 ~~g~r~~~k~~~~g~~~~g~~~Q~G 216 (222)
...++..++-.+.-.-..+||.++|
T Consensus 211 veairtnynd~y~ei~~~wGG~vlg 235 (258)
T 3iz5_H 211 LEAIKANFNDKFDEVRKKWGGGVMG 235 (258)
T ss_dssp HHHHTTTSCCCCCCCCSSCCCCCCH
T ss_pred HHHHHhHhhhhhHHHhhccCCCccC
Confidence 6777766653332222345555555
No 313
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=58.29 E-value=13 Score=34.57 Aligned_cols=21 Identities=33% Similarity=0.542 Sum_probs=14.1
Q ss_pred EEEEcCCCChhHHHHHHHHHH
Q 027527 101 VAFARHFGCVLCRKRADYLAA 121 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~ 121 (222)
|+.|-..|||+|.+--..|.+
T Consensus 20 v~vy~~~~Cp~C~~~k~~L~~ 40 (598)
T 2x8g_A 20 VILFSKTTCPYCKKVKDVLAE 40 (598)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHH
Confidence 334556799999975555554
No 314
>4a17_F RPL7A, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_F 4a1c_F 4a1e_F
Probab=57.59 E-value=38 Score=28.93 Aligned_cols=81 Identities=10% Similarity=0.133 Sum_probs=49.7
Q ss_pred HHHhHHHHHhCCCEEEEEcCCC-H-H---HHHHHHHHcCCCCceeecCChHHHHHcCCccccceee-ccchh-HHHHHHH
Q 027527 119 LAAKKDVMDASGVALVLIGPGS-V-E---QARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTF-TPKAG-LKIIQSY 191 (222)
Q Consensus 119 L~~~~~~l~~~gv~lvaIs~~s-~-~---~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~~~~~~-~P~a~-~~~l~~~ 191 (222)
+.+....++..-.++|+|..|- + + .+...|+++++|+-+ ++....+.+..|.++-....+ .+... ...+..+
T Consensus 129 vneVtKaIekgKAqLVVIA~DvdPielv~~LPaLCee~~VPY~~-V~sK~~LG~avGrKt~s~Vaitdv~~EDk~al~kL 207 (255)
T 4a17_F 129 LNHITTLIENKQAKLVVIAHDVDPIELVIFLPQLCRKNDVPFAF-VKGKAALGKLVNKKTATAVALTEVRNEDKAKLQQF 207 (255)
T ss_dssp HHHHHHHHHTSCCSEEEEESCCSSTHHHHHHHHHHHHTTCCEEE-ESCHHHHHHHHTSSCCSEEEECCCCHHHHHHHHHH
T ss_pred hHHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHcCCCEEE-ECCHHHHHHHhCCCcceEEEeeccCHHHHHHHHHH
Confidence 3344445555667777777662 3 3 335678999999954 567888999999876332223 23322 3455666
Q ss_pred HHHHHhhhc
Q 027527 192 MEGYRQDWK 200 (222)
Q Consensus 192 ~~g~r~~~k 200 (222)
...++..++
T Consensus 208 ve~iktnyn 216 (255)
T 4a17_F 208 SELFKTNYN 216 (255)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHhhcc
Confidence 666665554
No 315
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=56.34 E-value=3.4 Score=37.13 Aligned_cols=59 Identities=8% Similarity=0.083 Sum_probs=28.0
Q ss_pred EEEEEcCCCChhHHHHHHH-HHHhHHHHHhCCCEEEEEcC-C-CHHHHHHHHHHcCCC-Cc-eeecC
Q 027527 100 VVAFARHFGCVLCRKRADY-LAAKKDVMDASGVALVLIGP-G-SVEQARTFSEQTKFK-GE-VYADP 161 (222)
Q Consensus 100 vVvF~R~~~Cp~C~~el~~-L~~~~~~l~~~gv~lvaIs~-~-s~~~i~~f~~~~~~p-fp-il~Dp 161 (222)
|++| -..|||+|++-... |.+.--++. .+.|+-+.. + +++..++..+.++.+ +| |+.|-
T Consensus 263 VvVY-sk~~CPyC~~Ak~~LL~~~gV~y~--eidVlEld~~~~~~e~~~~L~~~tG~~TVPqVFI~G 326 (362)
T 2jad_A 263 IFVA-SKTYCPYSHAALNTLFEKLKVPRS--KVLVLQLNDMKEGADIQAALYEINGQRTVPNIYING 326 (362)
T ss_dssp EEEE-ECTTCHHHHHHHHHHHTTTCCCTT--TEEEEEGGGSTTHHHHHHHHHHHHCCCSSCEEEETT
T ss_pred EEEE-EcCCCcchHHHHHHHHHHcCCCcc--eEEEEEeccccCCHHHHHHHHHHHCCCCcCEEEECC
Confidence 4444 45899999975442 333211111 122333321 2 223334555556764 66 55554
No 316
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=55.55 E-value=22 Score=26.36 Aligned_cols=67 Identities=9% Similarity=0.091 Sum_probs=42.1
Q ss_pred CcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 027527 77 TVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (222)
Q Consensus 77 df~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p 154 (222)
..-+.|.||..+.-...+......+--+ . +...+..+++++.|+.++.++..+...++.+.++.++.
T Consensus 10 k~v~~DlDGTL~~~~~~~~~~~~~~~~~----~-------~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 76 (162)
T 2p9j_A 10 KLLIMDIDGVLTDGKLYYTEHGETIKVF----N-------VLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVE 76 (162)
T ss_dssp CEEEECCTTTTSCSEEEEETTEEEEEEE----E-------HHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCC
T ss_pred eEEEEecCcceECCceeecCCCceeeee----c-------ccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCH
Confidence 4567899987654322221111111111 1 22245566677889999999988888899999988876
No 317
>3izc_H 60S ribosomal protein RPL8 (L7AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_H 3o58_H 3o5h_H 3u5e_G 3u5i_G 4b6a_G
Probab=55.49 E-value=45 Score=28.47 Aligned_cols=96 Identities=6% Similarity=0.006 Sum_probs=59.0
Q ss_pred HHhHHHHHhCCCEEEEEcCCC-H----HHHHHHHHHcCCCCceeecCChHHHHHcCCccccce-eeccc-hhHHHHHHHH
Q 027527 120 AAKKDVMDASGVALVLIGPGS-V----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLV-TFTPK-AGLKIIQSYM 192 (222)
Q Consensus 120 ~~~~~~l~~~gv~lvaIs~~s-~----~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~~~~-~~~P~-a~~~~l~~~~ 192 (222)
.+....++..-+.+|+|..|- + ..+...|+++++|+- +++...+|.++.|.+.-... ...+. .....+..+.
T Consensus 137 keV~KaIekgKAkLVVIA~DadP~eivk~LpaLC~k~gVPy~-~V~sK~eLG~A~Gkk~~s~VAItD~g~eDk~al~kLv 215 (256)
T 3izc_H 137 NHVVALIENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYA-IVKGKARLGTLVNQKTSAVAALTEVRAEDEAALAKLV 215 (256)
T ss_dssp HHHHHHHHHTCCSEEEEESCCSSGGGTTHHHHHHHHHTCCEE-EESCHHHHHHHTTCSSCCSEEEESSCCSCCHHHHHHH
T ss_pred HHHHHHHHhCcceEEEEeCCCChHHHHHHHHHHHHhcCCCEE-EECCHHHHHHHhCCCCcEEEEeecCChhhHHHHHHHH
Confidence 344455666667888887763 2 234678999999975 77888999999999743322 22333 2234556666
Q ss_pred HHHHhhhccccccCCccCCceeeC
Q 027527 193 EGYRQDWKLSFERDTVSRGGWYDT 216 (222)
Q Consensus 193 ~g~r~~~k~~~~g~~~~g~~~Q~G 216 (222)
..++..++-.+.-.-..+||.++|
T Consensus 216 e~iktnynd~y~e~~~~wgg~~lg 239 (256)
T 3izc_H 216 STIDANFADKYDEVKKHWGGGILG 239 (256)
T ss_dssp HHHHHHCCCCCCCCCSSCCCCCCH
T ss_pred HHHHhhhhhhhhhHhhhcCCCccC
Confidence 777777663333222345555554
No 318
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=54.74 E-value=34 Score=31.03 Aligned_cols=88 Identities=20% Similarity=0.135 Sum_probs=53.9
Q ss_pred CCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCC--CEEEEEcCCCHHHH
Q 027527 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASG--VALVLIGPGSVEQA 144 (222)
Q Consensus 67 ~~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~g--v~lvaIs~~s~~~i 144 (222)
++...|..+|+.-|.+ +|+.+++-|+++.+-+||.+ - ...... ....+ ..++.| ++++.|+.+
T Consensus 418 ~~~~pG~r~p~~~l~~-~~~~~~~~dl~g~~f~ll~~-~---~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~----- 482 (535)
T 3ihg_A 418 PSGRPGFRGPHVLVSR-HGERLSTVDLFGDGWTLLAG-E---LGADWV--AAAEA---VSAELGVPVRAYRVGAG----- 482 (535)
T ss_dssp CCCCTTSBCCCCEEEE-TTEEEEGGGGCSSSEEEEEC-T---TCHHHH--HHHHH---HHHHHTCCEEEEEBTTT-----
T ss_pred CCCCCCCcCCCceeec-CCceeeHHHhcCCceEEEec-C---CccHHH--HHHHH---HHHhcCCceEEEEeCCc-----
Confidence 4467799999999853 58889999999666555442 1 111111 11111 223446 445555431
Q ss_pred HHHHHHcCCCCceeecCChHHHHHcCCccccceeeccc
Q 027527 145 RTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPK 182 (222)
Q Consensus 145 ~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~~~~~~~P~ 182 (222)
+.|++....+.+|+..+-..-+.|.
T Consensus 483 -------------~~d~~~~~~~~~~~~~~~~~lvRPD 507 (535)
T 3ihg_A 483 -------------LTDPESAVSERYGIGKAGASLVRPD 507 (535)
T ss_dssp -------------BBCSSCCHHHHHTCTTTCEEEECTT
T ss_pred -------------cccCcchHHHHhCCCCCceEeeCCC
Confidence 6799999999999987765555553
No 319
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=51.09 E-value=13 Score=33.12 Aligned_cols=40 Identities=13% Similarity=0.256 Sum_probs=34.9
Q ss_pred HHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCC
Q 027527 116 ADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (222)
Q Consensus 116 l~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~pf 155 (222)
.+...++...+++.|++++.|+.+..+.++.++++.++.+
T Consensus 223 ~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y 262 (385)
T 4gxt_A 223 LDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNY 262 (385)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSC
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCccc
Confidence 3677788889999999999999999999999999987543
No 320
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=50.53 E-value=55 Score=23.30 Aligned_cols=51 Identities=8% Similarity=0.002 Sum_probs=37.6
Q ss_pred HHHHHhCCCEEEEEcCCCH----HHHHHHHHHcCCCCceeecCChHHHHHcCCccc
Q 027527 123 KDVMDASGVALVLIGPGSV----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (222)
Q Consensus 123 ~~~l~~~gv~lvaIs~~s~----~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~ 174 (222)
...++..-+++|.|..|-. ..+..+|+++++|+-.+ ....++-.++|....
T Consensus 28 ~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~-~s~~eLG~A~Gk~~~ 82 (101)
T 3v7q_A 28 IKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKV-ESRAVLGRSIGKEAR 82 (101)
T ss_dssp HHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEE-SCHHHHHHHTTSSCC
T ss_pred HHHHhcCceeEEEEeccccccchhhhcccccccCCCeeee-chHHHHHhhhCccce
Confidence 3455666688888888743 35556789999998655 677889999999743
No 321
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=50.45 E-value=17 Score=27.18 Aligned_cols=39 Identities=3% Similarity=0.032 Sum_probs=31.5
Q ss_pred HHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCC
Q 027527 117 DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (222)
Q Consensus 117 ~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~pf 155 (222)
.++.++.+.+.+.|+.+|+|..++.+..++.+...+++.
T Consensus 61 ~dl~~L~~~l~~~gl~~vGV~g~~~~~~~~~a~~~GLp~ 99 (120)
T 3ghf_A 61 VNWPELHKIVTSTGLRIIGVSGCKDASLKVEIDRMGLPL 99 (120)
T ss_dssp CCHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCCcHHHHHHHHHCCCCc
Confidence 357778888899999999999887777778887777763
No 322
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=49.30 E-value=21 Score=27.36 Aligned_cols=65 Identities=12% Similarity=0.219 Sum_probs=43.0
Q ss_pred CcEEecCCCCeEeCCCcc-CC-CeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 027527 77 TVKVYDVNGNAIPISDLW-KD-RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (222)
Q Consensus 77 df~L~D~~G~~v~Lsdl~-~~-~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p 154 (222)
..-++|.||..+. ...+ .. ...+-.|.. ...+ ..+++++.|+++..++.++...++.++++.+++
T Consensus 13 k~vifD~DGTL~d-~~~~~~~~~~~~~~~~~-------~~~~-----~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~ 79 (176)
T 3mmz_A 13 DAVVLDFDGTQTD-DRVLIDSDGREFVSVHR-------GDGL-----GIAALRKSGLTMLILSTEQNPVVAARARKLKIP 79 (176)
T ss_dssp SEEEECCTTTTSC-SCCEECTTCCEEEEEEH-------HHHH-----HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC
T ss_pred CEEEEeCCCCcCc-CCEeecCCccHhHhccc-------ccHH-----HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe
Confidence 3678899999877 4332 11 122222211 0111 566778899999999988888889999988887
No 323
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=49.20 E-value=27 Score=26.69 Aligned_cols=34 Identities=6% Similarity=0.039 Sum_probs=27.9
Q ss_pred HhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 027527 121 AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (222)
Q Consensus 121 ~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p 154 (222)
+..+++++.|+.++.++..+...++.+.++.++.
T Consensus 42 ~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~ 75 (180)
T 1k1e_A 42 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK 75 (180)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC
T ss_pred HHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCc
Confidence 4566677889999999988888888888888876
No 324
>3umv_A Deoxyribodipyrimidine photo-lyase; CPD cyclobutane pyrimidine dimers, UV damaged DNA, DNA repai flavoprotein; HET: FAD; 1.71A {Oryza sativa japonica group}
Probab=49.01 E-value=56 Score=30.27 Aligned_cols=62 Identities=18% Similarity=0.051 Sum_probs=42.1
Q ss_pred CeEEEEEEcCCC--Ch---h--HHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCCceeec
Q 027527 97 RKAVVAFARHFG--CV---L--CRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (222)
Q Consensus 97 ~~vvVvF~R~~~--Cp---~--C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~pfpil~D 160 (222)
.+++.+|+.... -+ . .+--+..|+++.++|++.|+.++++.-+..+. .++++++++.- |+.|
T Consensus 68 ~pVl~vfildp~~~~~~~~~~r~~FL~~sL~dL~~~L~~lG~~L~v~~G~p~~v-~~L~~~~~a~~-V~~d 136 (506)
T 3umv_A 68 SPLAVAFALFPRPFLLSARRRQLGFLLRGLRRLAADAAARHLPFFLFTGGPAEI-PALVQRLGAST-LVAD 136 (506)
T ss_dssp CCEEEEEECCCTTCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCTTHH-HHHHHHTTCSE-EEEC
T ss_pred CCEEEEEeccchhhccCCCHHHHHHHHHHHHHHHHHHHHcCCceEEEecChHHH-HHHHHhcCCCE-EEec
Confidence 477778775543 11 1 12334578888899999999998876555566 99999988763 4445
No 325
>2xry_A Deoxyribodipyrimidine photolyase; DNA damage, DNA repair; HET: FAD; 1.50A {Methanosarcina mazei} PDB: 2xrz_A*
Probab=48.97 E-value=67 Score=29.18 Aligned_cols=75 Identities=11% Similarity=0.017 Sum_probs=49.1
Q ss_pred CeEEEEEEcCCCC---h--hHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCCceeecCC---------
Q 027527 97 RKAVVAFARHFGC---V--LCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPN--------- 162 (222)
Q Consensus 97 ~~vvVvF~R~~~C---p--~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~pfpil~Dpd--------- 162 (222)
.+++.+|+.-..- . --+-....|+++.++|++.|+.++.+..+..+.+.++++++++.- |+++.+
T Consensus 67 ~~v~~vfi~dp~~~~~~~~r~~Fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~-V~~~~~~~~~~~~~~ 145 (482)
T 2xry_A 67 VPVVVVFCLTDEFLEAGIRQYEFMLKGLQELEVSLSRKKIPSFFLRGDPGEKISRFVKDYNAGT-LVTDFSPLRIKNQWI 145 (482)
T ss_dssp SCEEEEEEECTTGGGSCHHHHHHHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTCSE-EEEECCCSHHHHHHH
T ss_pred CcEEEEEEeChhhhccCHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHHHcCCCE-EEEecccchhHHHHH
Confidence 4666666644321 1 112235678888999999999998876555578899999988753 444432
Q ss_pred hHHHHHcCCc
Q 027527 163 HSSYEALSFV 172 (222)
Q Consensus 163 ~~lyk~lGl~ 172 (222)
.++.+.+|+.
T Consensus 146 ~~v~~~lgi~ 155 (482)
T 2xry_A 146 EKVISGISIP 155 (482)
T ss_dssp HHHHHHCCSC
T ss_pred HHHHHHcCCE
Confidence 4455667763
No 326
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=48.96 E-value=70 Score=27.54 Aligned_cols=60 Identities=12% Similarity=0.217 Sum_probs=42.7
Q ss_pred HHHHHHhHHHHHhCCCEEEEEcC--CCHHHHHHHHHHcCCCCceeecCC------hHHHHHcCCcccc
Q 027527 116 ADYLAAKKDVMDASGVALVLIGP--GSVEQARTFSEQTKFKGEVYADPN------HSSYEALSFVSGV 175 (222)
Q Consensus 116 l~~L~~~~~~l~~~gv~lvaIs~--~s~~~i~~f~~~~~~pfpil~Dpd------~~lyk~lGl~~~~ 175 (222)
+.+.-+....+.+.|...|.+-. -+.+++++|++...-+.|+++-+. .+-.+.+|+.+-.
T Consensus 169 ~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~~P~i~~~~~~~~~~~~eL~~lGv~~v~ 236 (295)
T 1s2w_A 169 LDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNNQGPVVIVPTKYYKTPTDHFRDMGVSMVI 236 (295)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTTCSCEEECCSTTTTSCHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCCCCCEEEeCCCCCCCCHHHHHHcCCcEEE
Confidence 34555556677899999999943 467999999999885567665443 4456678877654
No 327
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=48.69 E-value=24 Score=25.52 Aligned_cols=53 Identities=13% Similarity=0.117 Sum_probs=40.4
Q ss_pred HHHHHhCCCEEEEEcCCCH----HHHHHHHHHcCCCCceeecCChHHHHHcCCcccc
Q 027527 123 KDVMDASGVALVLIGPGSV----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSGV 175 (222)
Q Consensus 123 ~~~l~~~gv~lvaIs~~s~----~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~~ 175 (222)
...++...+++|.+..|-+ ..+..+++++++|+-.|.+...++-++.|.....
T Consensus 31 ~kai~~gkaklVilA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~A~Gk~~~~ 87 (105)
T 3u5e_c 31 VKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRV 87 (105)
T ss_dssp HHHHHTTCCSEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHHHHHHTTCSSCC
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCCHHHHHHHhCCcccE
Confidence 4456566688888888754 3566788888888866788999999999987654
No 328
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=48.22 E-value=34 Score=24.83 Aligned_cols=53 Identities=8% Similarity=-0.063 Sum_probs=39.6
Q ss_pred HHHHHhCCCEEEEEcCCCH----HHHHHHHHHcCCCCceeecCChHHHHHcCCcccc
Q 027527 123 KDVMDASGVALVLIGPGSV----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSGV 175 (222)
Q Consensus 123 ~~~l~~~gv~lvaIs~~s~----~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~~ 175 (222)
...++..-+++|.|..|-+ ..+..+|+++++|+-.+.+...++-++.|.....
T Consensus 30 ~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~Vp~~~~~~sk~eLG~a~G~~~~~ 86 (110)
T 3cpq_A 30 IKFVKHGEGKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQHKITSLELGAVCGKPFPV 86 (110)
T ss_dssp HHHHHTTCCSEEEECTTCBHHHHHHHHHHHHHTTCCEEECCSCHHHHHHHTTCSSCC
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEcCCHHHHHHHhCCccce
Confidence 3445556688898888855 3455688888998767768889999999987553
No 329
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=48.12 E-value=14 Score=32.20 Aligned_cols=35 Identities=11% Similarity=0.145 Sum_probs=30.8
Q ss_pred HHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHc
Q 027527 117 DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQT 151 (222)
Q Consensus 117 ~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~ 151 (222)
+...++.+.+++.|+++++|+.+..+.++.|+++.
T Consensus 146 ~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 146 SGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 45677888899999999999999999999999873
No 330
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=47.39 E-value=63 Score=23.80 Aligned_cols=52 Identities=12% Similarity=0.109 Sum_probs=39.2
Q ss_pred hHHHHHhCCCEEEEEcCCC-H----HHHHHHHHHcCCCCceeecCChHHHHHcCCccc
Q 027527 122 KKDVMDASGVALVLIGPGS-V----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (222)
Q Consensus 122 ~~~~l~~~gv~lvaIs~~s-~----~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~ 174 (222)
....++..-+++|.|..|- + ..+..+|+++++|+ ++.+...++-++.|....
T Consensus 37 v~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~-~~v~sk~eLG~a~G~~~~ 93 (120)
T 1xbi_A 37 VTKAVERGIAKLVIIAEDVKPEEVVAHLPYLCEEKGIPY-AYVASKQDLGKAAGLEVA 93 (120)
T ss_dssp HHHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHHHTCCE-EEESCHHHHHHHTTCSSC
T ss_pred HHHHHHcCCceEEEEcCCCChHHHHHHHHHHHHhcCCCE-EEeCCHHHHHHHhCCCCC
Confidence 3445556667788887763 2 35778999999996 777888999999999844
No 331
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=46.11 E-value=32 Score=24.77 Aligned_cols=53 Identities=9% Similarity=0.063 Sum_probs=40.1
Q ss_pred HHHHHhCCCEEEEEcCCCH----HHHHHHHHHcCCCCceeecCChHHHHHcCCcccc
Q 027527 123 KDVMDASGVALVLIGPGSV----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSGV 175 (222)
Q Consensus 123 ~~~l~~~gv~lvaIs~~s~----~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~~ 175 (222)
...++..-+.+|.+..|-. ..+..+++++++|+-.|.+...++-++.|.....
T Consensus 31 ~kai~~gkaklViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~a~Gk~~~~ 87 (104)
T 4a18_G 31 IKAIRNGTAKLVFISNNCPTVRKSEIEYYASLAQISIHHFVGSNVELGTACGKYHRC 87 (104)
T ss_dssp HHHHHHTCCCEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHHHHHHTTCSSCC
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHhCCccCE
Confidence 4456666788888888743 4566778888888765788899999999987653
No 332
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=44.59 E-value=42 Score=24.68 Aligned_cols=52 Identities=12% Similarity=0.049 Sum_probs=40.3
Q ss_pred HHHHHhCCCEEEEEcCCCH----HHHHHHHHHcCCCCceeecCChHHHHHcCCccc
Q 027527 123 KDVMDASGVALVLIGPGSV----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (222)
Q Consensus 123 ~~~l~~~gv~lvaIs~~s~----~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~ 174 (222)
...++..-+++|.|..|-+ ..+..+|+++++|+-.+.+...++-++.|....
T Consensus 35 ~kai~~gkakLVilA~D~~~~~~~~i~~~c~~~~ipv~~~~~s~~eLG~A~Gk~~~ 90 (112)
T 3iz5_f 35 LKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFHGNNVDLGTACGKYYR 90 (112)
T ss_dssp HHHHHTTCCSEEEECSCCCHHHHHHHHHHHHHTTCCEECCCCTTCTHHHHHCTTCS
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEeCCCHHHHHHHhCCccc
Confidence 4455566688888888754 356678999999987776888999999999755
No 333
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=44.12 E-value=50 Score=26.35 Aligned_cols=40 Identities=10% Similarity=0.185 Sum_probs=31.3
Q ss_pred HHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCCcee
Q 027527 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVY 158 (222)
Q Consensus 119 L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~pfpil 158 (222)
..+...++++.|+.++.++-.+...++.+.++.+++.+++
T Consensus 27 ~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I 66 (227)
T 1l6r_A 27 AIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVF 66 (227)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEE
T ss_pred HHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEE
Confidence 4445566778899998888888889999999988876543
No 334
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=43.95 E-value=43 Score=23.00 Aligned_cols=53 Identities=9% Similarity=0.092 Sum_probs=38.7
Q ss_pred hHHHHHhCCCEEEEEcCCCH----HHHHHHHHHcCCCCceeecCChHHHHHcCCcccc
Q 027527 122 KKDVMDASGVALVLIGPGSV----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSGV 175 (222)
Q Consensus 122 ~~~~l~~~gv~lvaIs~~s~----~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~~ 175 (222)
....++..-+++|.|..|-. ..+..+|+++++|+-.+. ...++-++.|..+..
T Consensus 19 v~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~-sk~eLG~a~Gk~~~~ 75 (82)
T 3v7e_A 19 TVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVE-SMKKLGKACGIEVGA 75 (82)
T ss_dssp HHHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEES-CHHHHHHHHTCSSCC
T ss_pred HHHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEC-CHHHHHHHhCCCCCE
Confidence 34456666688898888743 355667899999986554 778899999987664
No 335
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=42.40 E-value=88 Score=22.10 Aligned_cols=50 Identities=8% Similarity=0.021 Sum_probs=37.1
Q ss_pred HHHHHhCCCEEEEEcCCCH----HHHHHHHHHcCCCCceeecCChHHHHHcCCcc
Q 027527 123 KDVMDASGVALVLIGPGSV----EQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (222)
Q Consensus 123 ~~~l~~~gv~lvaIs~~s~----~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~ 173 (222)
...++...+.+|.+..|-. ..+..+|+++++|+- +.+...++-+++|...
T Consensus 27 ~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~-~~~s~~eLG~a~Gk~~ 80 (101)
T 3on1_A 27 VKAVQNGQVTLVILSSDAGIHTKKKLLDKCGSYQIPVK-VVGNRQMLGRAIGKHE 80 (101)
T ss_dssp HHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEE-EESCHHHHHHHTTSSC
T ss_pred HHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHHcCCCEE-EeCCHHHHHHHhCCcC
Confidence 4455566688888888743 355567899999975 4678889999999963
No 336
>2zkr_f 60S ribosomal protein L7A; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=42.15 E-value=46 Score=28.54 Aligned_cols=52 Identities=6% Similarity=-0.036 Sum_probs=37.5
Q ss_pred HHHHHhCCCEEEEEcCCC-H----HHHHHHHHHcCCCCceeecCChHHHHHcCCcccc
Q 027527 123 KDVMDASGVALVLIGPGS-V----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSGV 175 (222)
Q Consensus 123 ~~~l~~~gv~lvaIs~~s-~----~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~~ 175 (222)
...++..-+.+|+|..|- + ..+..+|+++++|+-.+ +...+|..+.|..+-.
T Consensus 144 ~KaIekgkAkLVIIA~DasP~ei~~~Lp~LC~~~~VPyi~v-~sk~eLG~A~Gkk~~s 200 (266)
T 2zkr_f 144 TTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCII-KGKARLGHLVHRKTCT 200 (266)
T ss_dssp HHHHHTTCCSEEEEESCCSSSTTTTHHHHHHHHHTCCEEEE-SCHHHHHHHHTSSCCS
T ss_pred HHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCEEEE-CCHHHHHHHhCCCCce
Confidence 344555567788887763 2 25678899999998544 7789999999998443
No 337
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=41.41 E-value=36 Score=26.08 Aligned_cols=42 Identities=7% Similarity=0.069 Sum_probs=31.6
Q ss_pred HHHhHHHHHhCCCEEEEEcCCC---HHHHHHHHHHcCCCCceeec
Q 027527 119 LAAKKDVMDASGVALVLIGPGS---VEQARTFSEQTKFKGEVYAD 160 (222)
Q Consensus 119 L~~~~~~l~~~gv~lvaIs~~s---~~~i~~f~~~~~~pfpil~D 160 (222)
..+...++++.|+.++.++.-+ ...+..|+++++++++.+.+
T Consensus 29 ~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~~ 73 (142)
T 2obb_A 29 AVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAANK 73 (142)
T ss_dssp HHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESS
T ss_pred HHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEEEc
Confidence 3455566778899888776644 57888999999999986654
No 338
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=40.92 E-value=53 Score=25.33 Aligned_cols=36 Identities=8% Similarity=-0.078 Sum_probs=29.5
Q ss_pred HHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 027527 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (222)
Q Consensus 119 L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p 154 (222)
..+..+.+++.|+.+..|+.+....++.+.+..+++
T Consensus 97 ~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 97 AVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 334455677899999999999888999999999886
No 339
>1dnp_A DNA photolyase; DNA repair, electron transfer, excitation energy transfer, carbon-carbon, lyase (carbon-carbon); HET: DNA FAD MHF; 2.30A {Escherichia coli} SCOP: a.99.1.1 c.28.1.1
Probab=40.86 E-value=60 Score=29.57 Aligned_cols=63 Identities=10% Similarity=0.146 Sum_probs=42.2
Q ss_pred CeEEEEEEcCCC------Chh--HHHHHHHHHHhHHHHHhCCCEEEEEcC----CCHHHHHHHHHHcCCCCceeec
Q 027527 97 RKAVVAFARHFG------CVL--CRKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKFKGEVYAD 160 (222)
Q Consensus 97 ~~vvVvF~R~~~------Cp~--C~~el~~L~~~~~~l~~~gv~lvaIs~----~s~~~i~~f~~~~~~pfpil~D 160 (222)
++++.+|+.... ... -+-....|+++.++|++.|+.++.+.. +..+.+.++++++++. .|++|
T Consensus 28 ~~v~~vfi~dp~~~~~~~~~~~r~~fl~~sL~~L~~~L~~~G~~L~v~~~~~~g~~~~~l~~l~~~~~~~-~v~~~ 102 (471)
T 1dnp_A 28 ARVLALYIATPRQWATHNMSPRQAELINAQLNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVT-HLFYN 102 (471)
T ss_dssp SEEEEEEEECHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCEEEEECSSHHHHHHHHHHHHHHHTCC-EEEEE
T ss_pred CCEEEEEEECchhhccCCCCHHHHHHHHHHHHHHHHHHHHCCCeEEEEEccCCCCHHHHHHHHHHHcCCC-EEEEe
Confidence 477777775421 111 122355788888999999999998833 3347788999998876 35554
No 340
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=39.91 E-value=82 Score=26.73 Aligned_cols=64 Identities=8% Similarity=-0.039 Sum_probs=41.8
Q ss_pred eEEEEEEcCCCChhHHHHHHHHHHhHHHHHh-CCCEEEEEcCCCHHHHHH-HHHHcCCC--Cc--eeecC
Q 027527 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGSVEQART-FSEQTKFK--GE--VYADP 161 (222)
Q Consensus 98 ~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~-~gv~lvaIs~~s~~~i~~-f~~~~~~p--fp--il~Dp 161 (222)
+..+++|-..+|+.|.+....|.+...+++. ..+.++.|..+......+ |.+..++. +| ++.|.
T Consensus 246 ~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~~~~~~~~~~~~gi~~~~P~~~i~~~ 315 (350)
T 1sji_A 246 GIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDFPLLVAYWEKTFKIDLFKPQIGVVNV 315 (350)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGCHHHHHHHHHHCCSCTTSCEEEEEES
T ss_pred CcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchhhHHHHHHHHhhcCCCccCCcEEEEec
Confidence 4444556778999999999999999998873 457777777664333222 22455554 45 34555
No 341
>2wq7_A RE11660P; lyase-DNA complex, DNA repair, DNA lesion, lyase; HET: TDY Z FAD; 2.00A {Drosophila melanogaster} PDB: 2wb2_A* 2wq6_A* 3cvu_A* 3cvv_A* 3cvy_A* 3cvw_A* 3cvx_A*
Probab=39.50 E-value=52 Score=30.60 Aligned_cols=45 Identities=7% Similarity=0.011 Sum_probs=35.0
Q ss_pred HHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCCceeec
Q 027527 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (222)
Q Consensus 115 el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~pfpil~D 160 (222)
....|+++.++|++.|+.++.+..+..+.+.++++++++. .|+++
T Consensus 87 l~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~-~v~~~ 131 (543)
T 2wq7_A 87 LQQTLEDLDNQLRKLNSRLFVVRGKPAEVFPRIFKSWRVE-MLTFE 131 (543)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEESCHHHHHHHHHHHTTEE-EEEEE
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCC-EEEEe
Confidence 4567888899999999998887655557889999998875 34444
No 342
>3hug_B Probable conserved membrane protein; ECF sigma factor, zinc binding anti-sigma factor, oxidative transcription regulation; 2.35A {Mycobacterium tuberculosis}
Probab=37.48 E-value=18 Score=26.89 Aligned_cols=23 Identities=22% Similarity=0.411 Sum_probs=19.7
Q ss_pred CCChhHHHHHHHHHHhHHHHHhC
Q 027527 107 FGCVLCRKRADYLAAKKDVMDAS 129 (222)
Q Consensus 107 ~~Cp~C~~el~~L~~~~~~l~~~ 129 (222)
..|+-|+.++.+|++....+...
T Consensus 52 a~Cp~CR~ev~eL~~~~a~L~~l 74 (108)
T 3hug_B 52 AGCPECRGAVTELCGVPALLSQL 74 (108)
T ss_dssp HTCHHHHHHHHHHTTHHHHHTTS
T ss_pred HhCHHHHHHHHHHHHHHHHHhcC
Confidence 47999999999999988877653
No 343
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=37.13 E-value=1.2e+02 Score=22.24 Aligned_cols=50 Identities=16% Similarity=0.151 Sum_probs=37.7
Q ss_pred HHHHhCCCEEEEEcCCC-H----HHHHHHHHHcCCCCceeecCChHHHHHcCCccc
Q 027527 124 DVMDASGVALVLIGPGS-V----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (222)
Q Consensus 124 ~~l~~~gv~lvaIs~~s-~----~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~ 174 (222)
..++..-+++|.|..|- + ..+..+|+++++|+ ++.+...++-++.|....
T Consensus 38 kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~-~~v~sk~eLG~a~G~~~~ 92 (124)
T 2fc3_A 38 KAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKKIPY-VYVPSKKRLGEAAGIEVA 92 (124)
T ss_dssp HHHHTTCCSEEEEETTCSSGGGTTTHHHHHHHTTCCE-EEESCHHHHHHHTTCSSC
T ss_pred HHHHcCCceEEEEcCCCChHHHHHHHHHHHHHcCCCE-EEECCHHHHHHHhCCCCC
Confidence 34555557788887763 2 45778999999997 777888999999999843
No 344
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=36.01 E-value=1.8e+02 Score=25.09 Aligned_cols=75 Identities=16% Similarity=0.049 Sum_probs=45.0
Q ss_pred EEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEE-cCCCHHHHHHHHHHcC-CCCce--ee-----cCChHHHHHc
Q 027527 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI-GPGSVEQARTFSEQTK-FKGEV--YA-----DPNHSSYEAL 169 (222)
Q Consensus 99 vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaI-s~~s~~~i~~f~~~~~-~pfpi--l~-----Dpd~~lyk~l 169 (222)
-++|.-|-.- . ...-+.+--+....+.+.|...|.| +..+.+++++|++... +|..+ +. ..+.+-.+.+
T Consensus 162 d~~I~ARTDa-~-~~~gldeAi~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~~~Pv~~n~~~~g~~p~~t~~eL~~l 239 (307)
T 3lye_A 162 DFVLIARTDA-L-QSLGYEECIERLRAARDEGADVGLLEGFRSKEQAAAAVAALAPWPLLLNSVENGHSPLITVEEAKAM 239 (307)
T ss_dssp CCEEEEEECC-H-HHHCHHHHHHHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHTTSCBEEEEETTSSSCCCCHHHHHHH
T ss_pred CeEEEEechh-h-hccCHHHHHHHHHHHHHCCCCEEEecCCCCHHHHHHHHHHccCCceeEEeecCCCCCCCCHHHHHHc
Confidence 3556666442 1 1222333334445567899998877 5567899999999875 55422 11 1234567788
Q ss_pred CCcccc
Q 027527 170 SFVSGV 175 (222)
Q Consensus 170 Gl~~~~ 175 (222)
|+.+-.
T Consensus 240 Gv~~v~ 245 (307)
T 3lye_A 240 GFRIMI 245 (307)
T ss_dssp TCSEEE
T ss_pred CCeEEE
Confidence 986653
No 345
>2j07_A Deoxyribodipyrimidine photo-lyase; flavoprotein, nucleotide-binding, DNA repair; HET: FAD HDF; 1.95A {Thermus thermophilus} SCOP: a.99.1.1 c.28.1.1 PDB: 1iqu_A* 1iqr_A* 2j08_A* 2j09_A*
Probab=35.17 E-value=61 Score=29.00 Aligned_cols=56 Identities=25% Similarity=0.197 Sum_probs=40.9
Q ss_pred HHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCCceeecCC---------hHHHHHcCC
Q 027527 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPN---------HSSYEALSF 171 (222)
Q Consensus 115 el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~pfpil~Dpd---------~~lyk~lGl 171 (222)
....|+++.++|++.|+.++.+..+..+.+.++++++++. .|++|.+ ..+.+.+|+
T Consensus 50 l~~sL~~l~~~L~~~g~~l~~~~g~~~~~l~~l~~~~~~~-~v~~~~~~~~~~~~rd~~v~~~l~i 114 (420)
T 2j07_A 50 FLENVRALREAYRARGGALWVLEGLPWEKVPEAARRLKAK-AVYALTSHTPYGRYRDGRVREALPV 114 (420)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTCS-EEEEECCCSHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCC-EEEEecccChhHHHHHHHHHHHcCC
Confidence 3557888889999999999887655557889999998875 3555433 455555555
No 346
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=34.90 E-value=1.7e+02 Score=24.84 Aligned_cols=61 Identities=10% Similarity=0.049 Sum_probs=42.8
Q ss_pred HHHHHHHhHHHHHhCCCEEEEEcC-CCHHHHHHHHHHcCCCCceeec---CChHHHHHcCCcccc
Q 027527 115 RADYLAAKKDVMDASGVALVLIGP-GSVEQARTFSEQTKFKGEVYAD---PNHSSYEALSFVSGV 175 (222)
Q Consensus 115 el~~L~~~~~~l~~~gv~lvaIs~-~s~~~i~~f~~~~~~pfpil~D---pd~~lyk~lGl~~~~ 175 (222)
.+.+.-+....+.+.|...|.+-. -+.+.+++|++...+|..+..- .+.+-.+.+|+++-.
T Consensus 166 ~~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~~P~n~~~~~~~~~~~eL~~lGv~~v~ 230 (275)
T 2ze3_A 166 RLAETVRRGQAYADAGADGIFVPLALQSQDIRALADALRVPLNVMAFPGSPVPRALLDAGAARVS 230 (275)
T ss_dssp HHHHHHHHHHHHHHTTCSEEECTTCCCHHHHHHHHHHCSSCEEEECCTTSCCHHHHHHTTCSEEE
T ss_pred hHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhcCCCEEEecCCCCCCHHHHHHcCCcEEE
Confidence 355566666778899999888744 4579999999998877544432 344557778877653
No 347
>2gjf_A Designed protein; procarboxypeptidase, de novo protein; NMR {}
Probab=34.71 E-value=33 Score=23.01 Aligned_cols=28 Identities=21% Similarity=0.224 Sum_probs=24.8
Q ss_pred EEEEcCCCHHHHHHHHHHcCCCCceeec
Q 027527 133 LVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (222)
Q Consensus 133 lvaIs~~s~~~i~~f~~~~~~pfpil~D 160 (222)
=|.|.++..+..+++.++.+++|.|+.+
T Consensus 50 dI~V~p~~~~~f~~~L~~~~I~y~Vlie 77 (78)
T 2gjf_A 50 VILIPSDMVEWFLEMLKAKGIPFTVYVE 77 (78)
T ss_dssp EEEECTTSHHHHHHHHHHHTCCEEEEEE
T ss_pred EEEECHHHHHHHHHHHHHCCCcEEEEeC
Confidence 4678999999999999999999998765
No 348
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=33.77 E-value=84 Score=25.17 Aligned_cols=58 Identities=14% Similarity=0.241 Sum_probs=34.6
Q ss_pred CcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCC
Q 027527 77 TVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (222)
Q Consensus 77 df~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~pf 155 (222)
..-+.|.||..+.-... ..+...+...++.+.|+.++.++--+...++++.++.+++.
T Consensus 6 kli~~DlDGTLl~~~~~---------------------i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 63 (279)
T 3mpo_A 6 KLIAIDIDGTLLNEKNE---------------------LAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDG 63 (279)
T ss_dssp CEEEECC--------------------------------CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCS
T ss_pred EEEEEcCcCCCCCCCCc---------------------CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Confidence 35678999987653321 12344455566778899988877777888899999888764
No 349
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=33.41 E-value=87 Score=23.58 Aligned_cols=51 Identities=12% Similarity=0.086 Sum_probs=37.5
Q ss_pred HHHHhCCCEEEEEcCCCH-----HHHHHHHHHcCCCCceeecCChHHHHHcCCcccc
Q 027527 124 DVMDASGVALVLIGPGSV-----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSGV 175 (222)
Q Consensus 124 ~~l~~~gv~lvaIs~~s~-----~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~~ 175 (222)
..++..-+++|.|..|-. ..+..+|+++++|+ ++.+...++-++.|..+..
T Consensus 51 kal~~gkaklViiA~D~~~~~~~~~l~~lc~~~~IP~-~~v~sk~eLG~a~G~~~~v 106 (135)
T 2aif_A 51 KALNRGIAEIVLLAADAEPLEILLHLPLVCEDKNTPY-VFVRSKVALGRACGVSRPV 106 (135)
T ss_dssp HHHHTTCEEEEEEETTCSCHHHHHHHHHHHHHTTCCE-EEESCHHHHHHHTTCSSCC
T ss_pred HHHHcCCCeEEEEecCCChHHHHhHHHHHHHhcCCcE-EEECCHHHHHHHhCCCCcE
Confidence 345555577888877622 34567899999998 4567889999999998765
No 350
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=32.44 E-value=1.4e+02 Score=21.64 Aligned_cols=50 Identities=14% Similarity=0.171 Sum_probs=37.5
Q ss_pred HHHHhCCCEEEEEcCCC-----HHHHHHHHHHcCCCCceeecCChHHHHHcCCccc
Q 027527 124 DVMDASGVALVLIGPGS-----VEQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (222)
Q Consensus 124 ~~l~~~gv~lvaIs~~s-----~~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~ 174 (222)
..++..-+++|.|..|- ...+..+|+++++|+ ++.+...++-++.|....
T Consensus 37 kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~-~~~~sk~eLG~a~G~~~~ 91 (119)
T 1rlg_A 37 KAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPY-IYVKSKNDLGRAVGIEVP 91 (119)
T ss_dssp HHHTTTCCSEEEEESCCSCSTTTTHHHHHHHHHTCCE-EEESCHHHHHHHTTCSSC
T ss_pred HHHHcCCCcEEEEeCCCChHHHHHHHHHHHHHcCCCE-EEeCCHHHHHHHhCCCCC
Confidence 34445557778777662 256788999999996 777888999999999844
No 351
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=31.78 E-value=91 Score=24.05 Aligned_cols=23 Identities=13% Similarity=0.305 Sum_probs=16.8
Q ss_pred HHHhHHHHHhCCCEEEEEcCCCH
Q 027527 119 LAAKKDVMDASGVALVLIGPGSV 141 (222)
Q Consensus 119 L~~~~~~l~~~gv~lvaIs~~s~ 141 (222)
+.+....+++.|+.|.+|+.++.
T Consensus 128 ~~~~~~~~~~~~i~v~~igig~~ 150 (218)
T 3ibs_A 128 AVEAAKAAAEKGIQVSVLGVGMP 150 (218)
T ss_dssp HHHHHHHHHTTTEEEEEEEESCT
T ss_pred HHHHHHHHHhcCCEEEEEEecCC
Confidence 34455666788999999988763
No 352
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=31.18 E-value=67 Score=25.00 Aligned_cols=32 Identities=16% Similarity=0.129 Sum_probs=25.3
Q ss_pred EEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEE
Q 027527 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVL 135 (222)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lva 135 (222)
|.+|..+-||.|..-.+.|.++.+++ +++|.-
T Consensus 3 I~~~~D~~CP~cy~~~~~l~~~~~~~---~~~v~~ 34 (203)
T 2imf_A 3 VDFYFDFLSPFSYLANQRLSKLAQDY---GLTIRY 34 (203)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHH---CCEEEE
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHc---CCeEEE
Confidence 67788999999999999998887776 355443
No 353
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=30.96 E-value=1.8e+02 Score=24.99 Aligned_cols=75 Identities=12% Similarity=0.084 Sum_probs=45.9
Q ss_pred EEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEE-cCCCHHHHHHHHHHcCCCCc--eee-----cCChHHHHHcCC
Q 027527 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI-GPGSVEQARTFSEQTKFKGE--VYA-----DPNHSSYEALSF 171 (222)
Q Consensus 100 vVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaI-s~~s~~~i~~f~~~~~~pfp--il~-----Dpd~~lyk~lGl 171 (222)
++|.-|-.-- ..+-+.+--+....+.+.|..+|.| +..+.+++++|++....|.. +.. ..+.+-.+.+|+
T Consensus 156 ~~I~ARTDa~--~~~gldeai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~~~~Pl~~n~~~~g~tp~~~~~eL~~lGv 233 (298)
T 3eoo_A 156 FVIMARTDAA--AAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEAVKVPILANLTEFGSTPLFTLDELKGANV 233 (298)
T ss_dssp SEEEEEECTH--HHHHHHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHHCSCBEEECCTTSSSCCCCHHHHHHTTC
T ss_pred eEEEEeehhh--hhcCHHHHHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHHcCCCeEEEeccCCCCCCCCHHHHHHcCC
Confidence 4555554332 1222333334445577899998888 45678999999999876542 111 123456778898
Q ss_pred ccccc
Q 027527 172 VSGVL 176 (222)
Q Consensus 172 ~~~~~ 176 (222)
++-..
T Consensus 234 ~~v~~ 238 (298)
T 3eoo_A 234 DIALY 238 (298)
T ss_dssp CEEEE
T ss_pred eEEEE
Confidence 77643
No 354
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=30.62 E-value=97 Score=23.80 Aligned_cols=58 Identities=7% Similarity=0.002 Sum_probs=35.0
Q ss_pred CCc-EEecCCCCeEeCCCccC--CCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcC
Q 027527 76 DTV-KVYDVNGNAIPISDLWK--DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (222)
Q Consensus 76 pdf-~L~D~~G~~v~Lsdl~~--~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~ 138 (222)
.++ .+.+.+|..+....+-. +.+.+|+|+.+.++..- .+..+.+.+.+.|..++++..
T Consensus 17 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~-----~~~~~~~~l~~~g~~v~~~d~ 77 (303)
T 3pe6_A 17 QDLPHLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEHSG-----RYEELARMLMGLDLLVFAHDH 77 (303)
T ss_dssp GGSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGG-----GGHHHHHHHHHTTEEEEEECC
T ss_pred CCCCeEecCCCeEEEEEEeccCCCCCeEEEEECCCCchhh-----HHHHHHHHHHhCCCcEEEeCC
Confidence 344 67778888777654321 23456777766654322 223445566677999998854
No 355
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=30.50 E-value=44 Score=25.46 Aligned_cols=40 Identities=10% Similarity=0.024 Sum_probs=30.7
Q ss_pred HHHHHhHHHHHhCCCEEEEEcCC---------------CHHHHHHHHHHcCCCCc
Q 027527 117 DYLAAKKDVMDASGVALVLIGPG---------------SVEQARTFSEQTKFKGE 156 (222)
Q Consensus 117 ~~L~~~~~~l~~~gv~lvaIs~~---------------s~~~i~~f~~~~~~pfp 156 (222)
+...+..+++++.|+++.+++.. ..+.++...+..++.|+
T Consensus 45 pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd 99 (176)
T 2fpr_A 45 PGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFD 99 (176)
T ss_dssp TTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred ccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCee
Confidence 34555666777889999999887 34677888889898876
No 356
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=30.27 E-value=80 Score=23.33 Aligned_cols=59 Identities=19% Similarity=0.245 Sum_probs=40.0
Q ss_pred HhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC--Ccee--ec------CC----hHHHHHcCCccccceee
Q 027527 121 AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK--GEVY--AD------PN----HSSYEALSFVSGVLVTF 179 (222)
Q Consensus 121 ~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p--fpil--~D------pd----~~lyk~lGl~~~~~~~~ 179 (222)
+..+++++.|+.+..++.++.+.++...+..++. |+.+ .| |+ ..+.+.+|+...-...+
T Consensus 91 ~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~i 163 (216)
T 2pib_A 91 EALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVF 163 (216)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEEEE
T ss_pred HHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChHHhcCEEeecccCCCCCcCcHHHHHHHHHcCCCCceEEEE
Confidence 3455677889999999999888889998888876 5432 22 22 23566677665544444
No 357
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=30.25 E-value=2.1e+02 Score=24.64 Aligned_cols=60 Identities=12% Similarity=0.113 Sum_probs=40.7
Q ss_pred HHHHHHhHHHHHhCCCEEEEE-cCCCHHHHHHHHHHcCCCCce-ee------cCChHHHHHcCCcccc
Q 027527 116 ADYLAAKKDVMDASGVALVLI-GPGSVEQARTFSEQTKFKGEV-YA------DPNHSSYEALSFVSGV 175 (222)
Q Consensus 116 l~~L~~~~~~l~~~gv~lvaI-s~~s~~~i~~f~~~~~~pfpi-l~------Dpd~~lyk~lGl~~~~ 175 (222)
+.+.-+....+.+.|...|.+ +.-+.+++++|++....|..+ .. ..+.+-.+.+|+++-.
T Consensus 174 ~~~ai~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~ 241 (305)
T 3ih1_A 174 LDEAIERANAYVKAGADAIFPEALQSEEEFRLFNSKVNAPLLANMTEFGKTPYYSAEEFANMGFQMVI 241 (305)
T ss_dssp HHHHHHHHHHHHHHTCSEEEETTCCSHHHHHHHHHHSCSCBEEECCTTSSSCCCCHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHcCCCEEEeecCCCCCCCCCHHHHHHcCCCEEE
Confidence 444555556677899998888 455679999999998776521 11 1234567788887764
No 358
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=30.06 E-value=1.4e+02 Score=25.52 Aligned_cols=59 Identities=15% Similarity=0.128 Sum_probs=39.8
Q ss_pred HHHHHHhHHHHHhCCCEEEEEcC--CCHHHHHHHHHHcCCCCceeecC------ChHHHHHcC-Cccc
Q 027527 116 ADYLAAKKDVMDASGVALVLIGP--GSVEQARTFSEQTKFKGEVYADP------NHSSYEALS-FVSG 174 (222)
Q Consensus 116 l~~L~~~~~~l~~~gv~lvaIs~--~s~~~i~~f~~~~~~pfpil~Dp------d~~lyk~lG-l~~~ 174 (222)
+.+.-+....+.+.|...|.+-. -+.+++++|++...-|.|++..+ +.+-.+.+| +++-
T Consensus 165 ~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~~eL~~lG~v~~v 232 (290)
T 2hjp_A 165 QQEAVRRGQAYEEAGADAILIHSRQKTPDEILAFVKSWPGKVPLVLVPTAYPQLTEADIAALSKVGIV 232 (290)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCCCSSCEEECGGGCTTSCHHHHHTCTTEEEE
T ss_pred HHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcCCCCCEEEeccCCCCCCHHHHHhcCCeeEE
Confidence 44555555677889999888854 45689999999988556766432 344455666 5544
No 359
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=30.01 E-value=1.2e+02 Score=22.63 Aligned_cols=48 Identities=13% Similarity=0.097 Sum_probs=37.1
Q ss_pred HHHHHhCCCEEEEEcCCC-H----HHHHHHHHHcCCCCceeecCChHHHHHcCC
Q 027527 123 KDVMDASGVALVLIGPGS-V----EQARTFSEQTKFKGEVYADPNHSSYEALSF 171 (222)
Q Consensus 123 ~~~l~~~gv~lvaIs~~s-~----~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl 171 (222)
...++...+++|.|..|- + ..+..+|+++++|+- +.+...++-++.|.
T Consensus 33 ~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~-~v~sk~~LG~a~G~ 85 (126)
T 2xzm_U 33 LRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYV-SVPKRASLGEYLGH 85 (126)
T ss_dssp HHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEE-EESCSHHHHHHHTC
T ss_pred HHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEE-EECCHHHHHHHHCC
Confidence 344566667888887763 3 467889999999985 56788999999997
No 360
>1owl_A Photolyase, deoxyribodipyrimidine photolyase; DNA repair, flavin enzyme, photoreactivating enzyme; HET: FAD; 1.80A {Synechococcus elongatus} SCOP: a.99.1.1 c.28.1.1 PDB: 1owm_A* 1own_A* 1owo_A* 1owp_A* 1qnf_A* 1tez_A*
Probab=29.58 E-value=73 Score=29.06 Aligned_cols=46 Identities=15% Similarity=0.206 Sum_probs=35.8
Q ss_pred HHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCCceeecC
Q 027527 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADP 161 (222)
Q Consensus 115 el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~pfpil~Dp 161 (222)
....|+++.++|++.|+.++.+..+..+.+.++++++++. .|+++.
T Consensus 55 l~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~-~v~~~~ 100 (484)
T 1owl_A 55 LQGCLQELQQRYQQAGSRLLLLQGDPQHLIPQLAQQLQAE-AVYWNQ 100 (484)
T ss_dssp HHHHHHHHHHHHHHHTSCEEEEESCHHHHHHHHHHHTTCS-EEEEEC
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCC-EEEEec
Confidence 4557888899999999999888655557889999998876 355543
No 361
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=29.44 E-value=1.2e+02 Score=24.34 Aligned_cols=60 Identities=7% Similarity=-0.013 Sum_probs=36.3
Q ss_pred cCCCc-EEecCCCCeEeCCCcc--CCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcC
Q 027527 74 LLDTV-KVYDVNGNAIPISDLW--KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (222)
Q Consensus 74 ~apdf-~L~D~~G~~v~Lsdl~--~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~ 138 (222)
...++ .+...+|..+....+. ++.+.+|+++.+.++..- .+..+.+.|.+.|..|+++..
T Consensus 33 ~~~~~~~~~~~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~~-----~~~~~~~~l~~~g~~vi~~D~ 95 (342)
T 3hju_A 33 PYQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHSG-----RYEELARMLMGLDLLVFAHDH 95 (342)
T ss_dssp BTTSSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGG-----GGHHHHHHHHTTTEEEEEECC
T ss_pred ccccCceEEccCCeEEEEEEeCCCCCCCcEEEEECCCCcccc-----hHHHHHHHHHhCCCeEEEEcC
Confidence 34456 6778888877754432 123456666666554322 233445567777999999843
No 362
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=29.33 E-value=1.4e+02 Score=21.88 Aligned_cols=52 Identities=10% Similarity=0.002 Sum_probs=37.6
Q ss_pred HHHHHhCCCEEEEEcCCCH-----HHHHHHHHHcCCCCceeecCChHHHHHcCCcccc
Q 027527 123 KDVMDASGVALVLIGPGSV-----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSGV 175 (222)
Q Consensus 123 ~~~l~~~gv~lvaIs~~s~-----~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~~ 175 (222)
...++..-+++|.|..|-. ..+..+|+++++|+- +.+...++-++.|.+...
T Consensus 29 ~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~-~v~sk~eLG~a~g~k~~~ 85 (121)
T 2lbw_A 29 VKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYI-FIPSKQDLGAAGATKRPT 85 (121)
T ss_dssp HHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEE-ECCCHHHHHHHHTCSSCC
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEE-EECCHHHHHHHhCCCCCE
Confidence 3455666788888877622 356788999999974 445778899999976643
No 363
>1u3d_A Cryptochrome 1 apoprotein; photolyase, AMPPNP, signaling protein; HET: FAD ANP NDS; 2.45A {Arabidopsis thaliana} SCOP: a.99.1.1 c.28.1.1 PDB: 1u3c_A*
Probab=29.24 E-value=95 Score=28.44 Aligned_cols=45 Identities=11% Similarity=0.117 Sum_probs=35.7
Q ss_pred HHHHHHHhHHHHHhCCCEEEEEcCCCH-HHHHHHHHHcCCCCceeec
Q 027527 115 RADYLAAKKDVMDASGVALVLIGPGSV-EQARTFSEQTKFKGEVYAD 160 (222)
Q Consensus 115 el~~L~~~~~~l~~~gv~lvaIs~~s~-~~i~~f~~~~~~pfpil~D 160 (222)
....|+++.++|++.|+.++.+-.+++ +.+.++++++++.- |+.|
T Consensus 63 l~~sL~~L~~~L~~~G~~L~v~~~g~~~~~l~~l~~~~~~~~-V~~~ 108 (509)
T 1u3d_A 63 LKNSLAQLDSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQ-IFFN 108 (509)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHHHTCCE-EEEE
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHcCCCE-EEEe
Confidence 356888899999999999988865555 78899999988863 5544
No 364
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=29.24 E-value=1.7e+02 Score=21.33 Aligned_cols=51 Identities=8% Similarity=0.179 Sum_probs=38.2
Q ss_pred HHHHHhCCCEEEEEcCCC-H----HHHHHHHHHcCCCCceeecCChHHHHHcCCccc
Q 027527 123 KDVMDASGVALVLIGPGS-V----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (222)
Q Consensus 123 ~~~l~~~gv~lvaIs~~s-~----~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~ 174 (222)
...++..-+.+|.|..|- + ..+..+|+++++|+ ++.+...++-++.|....
T Consensus 38 ~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~-~~~~sk~eLG~a~G~~~~ 93 (120)
T 1vq8_F 38 TKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPF-IFVEQQDDLGHAAGLEVG 93 (120)
T ss_dssp HHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHTTCCCE-EEESCHHHHHHHTTCSSC
T ss_pred HHHHHcCCceEEEEeCCCChHHHHHHHHHHHHhcCCCE-EEECCHHHHHHHhCCCCC
Confidence 344555567788887763 2 35778999999996 777888999999999844
No 365
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=28.39 E-value=34 Score=27.35 Aligned_cols=21 Identities=33% Similarity=0.344 Sum_probs=17.9
Q ss_pred CCChhHHHHHHHHHHhHHHHH
Q 027527 107 FGCVLCRKRADYLAAKKDVMD 127 (222)
Q Consensus 107 ~~Cp~C~~el~~L~~~~~~l~ 127 (222)
..||.||.++.+|.+....+.
T Consensus 33 ~~C~~Cr~~v~~l~~~~~~l~ 53 (195)
T 2q1z_B 33 SLCDECRARAGALDAVGGSLM 53 (195)
T ss_dssp HHCHHHHHHHHHHHHHHHHHH
T ss_pred hHCHHHHHHHHHHHHHHHHHh
Confidence 469999999999999886654
No 366
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=28.22 E-value=1.9e+02 Score=25.14 Aligned_cols=58 Identities=14% Similarity=0.199 Sum_probs=39.7
Q ss_pred HHHHHHhHHHHHhCCCEEEEE-cCCCHHHHHHHHHHcCCCCceee---------cCChHHHHHcCCcccc
Q 027527 116 ADYLAAKKDVMDASGVALVLI-GPGSVEQARTFSEQTKFKGEVYA---------DPNHSSYEALSFVSGV 175 (222)
Q Consensus 116 l~~L~~~~~~l~~~gv~lvaI-s~~s~~~i~~f~~~~~~pfpil~---------Dpd~~lyk~lGl~~~~ 175 (222)
+.+.-+....+.+.|...|.+ +.-+.+.+++|++...+| ++. ..+.+-.+.+|+++-.
T Consensus 188 l~~ai~Ra~Ay~eAGAd~i~~e~~~~~e~~~~i~~~l~~P--~lan~~~~g~~~~~~~~eL~~lGv~~v~ 255 (318)
T 1zlp_A 188 LEEGIRRANLYKEAGADATFVEAPANVDELKEVSAKTKGL--RIANMIEGGKTPLHTPEEFKEMGFHLIA 255 (318)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHSCSE--EEEEECTTSSSCCCCHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhcCCC--EEEEeccCCCCCCCCHHHHHHcCCeEEE
Confidence 344555556778999998877 445679999999987655 432 2345567788887664
No 367
>1np7_A DNA photolyase; protein with FAD cofactor; HET: DNA FAD; 1.90A {Synechocystis SP} SCOP: a.99.1.1 c.28.1.1
Probab=27.85 E-value=67 Score=29.25 Aligned_cols=45 Identities=11% Similarity=0.124 Sum_probs=35.4
Q ss_pred HHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCCceeec
Q 027527 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (222)
Q Consensus 115 el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~pfpil~D 160 (222)
....|+++.++|++.|+.++.+..+..+.+.++++++++. .|+++
T Consensus 63 l~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~-~V~~~ 107 (489)
T 1np7_A 63 LQQSVQNLAESLQKVGNKLLVTTGLPEQVIPQIAKQINAK-TIYYH 107 (489)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTEE-EEEEE
T ss_pred HHHHHHHHHHHHHHCCCcEEEEECCHHHHHHHHHHHcCCC-EEEEe
Confidence 4567888899999999999887655557889999998875 35555
No 368
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=27.73 E-value=87 Score=24.36 Aligned_cols=40 Identities=18% Similarity=0.095 Sum_probs=31.3
Q ss_pred HHHHHhHHHHHhCCCEEEEEcCCC---------------HHHHHHHHHHcCCCCc
Q 027527 117 DYLAAKKDVMDASGVALVLIGPGS---------------VEQARTFSEQTKFKGE 156 (222)
Q Consensus 117 ~~L~~~~~~l~~~gv~lvaIs~~s---------------~~~i~~f~~~~~~pfp 156 (222)
+...+..+++++.|+.++.++..+ .+.++...++.++.|.
T Consensus 53 pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f~ 107 (211)
T 2gmw_A 53 DGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD 107 (211)
T ss_dssp TTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred cCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCceE
Confidence 445566677888999999999888 4677888888888864
No 369
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=26.98 E-value=1.2e+02 Score=23.77 Aligned_cols=62 Identities=16% Similarity=0.150 Sum_probs=41.6
Q ss_pred CcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCCc
Q 027527 77 TVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGE 156 (222)
Q Consensus 77 df~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~pfp 156 (222)
.+-+.|.||.-+.-.. .+ .+...+...++++.|+.++.++--+...++++.+..+++.+
T Consensus 4 kli~~DlDGTLl~~~~-----~i----------------~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~ 62 (231)
T 1wr8_A 4 KAISIDIDGTITYPNR-----MI----------------HEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGP 62 (231)
T ss_dssp CEEEEESTTTTBCTTS-----CB----------------CHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSC
T ss_pred eEEEEECCCCCCCCCC-----cC----------------CHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCe
Confidence 3567899998765321 10 12344555667788999887777777888888888888765
Q ss_pred eee
Q 027527 157 VYA 159 (222)
Q Consensus 157 il~ 159 (222)
+++
T Consensus 63 ~i~ 65 (231)
T 1wr8_A 63 VVA 65 (231)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 370
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=26.55 E-value=2.6e+02 Score=23.92 Aligned_cols=60 Identities=7% Similarity=0.088 Sum_probs=40.9
Q ss_pred HHHHHHhHHHHHhCCCEEEEE-cCCCHHHHHHHHHHcCCCC--cee-----ecCChHHHHHcCCcccc
Q 027527 116 ADYLAAKKDVMDASGVALVLI-GPGSVEQARTFSEQTKFKG--EVY-----ADPNHSSYEALSFVSGV 175 (222)
Q Consensus 116 l~~L~~~~~~l~~~gv~lvaI-s~~s~~~i~~f~~~~~~pf--pil-----~Dpd~~lyk~lGl~~~~ 175 (222)
+.+.-+....+++.|...|.+ +.-+.+.+++|++...+|. .+. ...+.+-.+.+|+..-.
T Consensus 166 l~~ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~ 233 (295)
T 1xg4_A 166 LDAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAMAL 233 (295)
T ss_dssp HHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHCSCBEEECCSSSSSCCCCHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHcCCCEEEEecccCCCCCCCHHHHHHcCCCEEE
Confidence 344555556778999998888 4445799999999988764 122 12345667788887653
No 371
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=26.12 E-value=87 Score=23.07 Aligned_cols=36 Identities=8% Similarity=0.132 Sum_probs=29.5
Q ss_pred HHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 027527 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (222)
Q Consensus 119 L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p 154 (222)
+.+..+++++.|+++..++.++.+.++...+..++.
T Consensus 94 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 129 (214)
T 3e58_A 94 VLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQ 129 (214)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcH
Confidence 444556777889999999999988999999988875
No 372
>2j4d_A Cryptochrome 3, cryptochrome DASH; DNA-binding protein, flavoprotein, FAD, mitochondrion, plastid, chromophore, chloroplast; HET: FAD MHF; 1.9A {Arabidopsis thaliana} PDB: 2vtb_A* 2ijg_X* 2vtb_B*
Probab=25.96 E-value=80 Score=29.17 Aligned_cols=45 Identities=13% Similarity=0.197 Sum_probs=35.6
Q ss_pred HHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCCceeec
Q 027527 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (222)
Q Consensus 115 el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~pfpil~D 160 (222)
....|+++.++|++.|+.++.+..+..+.+.++++++++. .|+++
T Consensus 98 l~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~-~V~~~ 142 (525)
T 2j4d_A 98 LMECLVDLRKNLMKRGLNLLIRSGKPEEILPSLAKDFGAR-TVFAH 142 (525)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEESCHHHHHHHHHHHHTCS-EEEEE
T ss_pred HHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHcCCC-EEEEe
Confidence 4567888899999999998887655557889999998885 35554
No 373
>3vi6_A 60S ribosomal protein L30; three-layer alpha/beta/ALPA; 1.59A {Homo sapiens} PDB: 2zkr_6 1ysh_C
Probab=25.88 E-value=97 Score=23.08 Aligned_cols=53 Identities=13% Similarity=0.071 Sum_probs=38.3
Q ss_pred HHHHHhCCCEEEEEcCCCHH----HHHHHHHHcCCCCceeecCChHHHHHcCCcccc
Q 027527 123 KDVMDASGVALVLIGPGSVE----QARTFSEQTKFKGEVYADPNHSSYEALSFVSGV 175 (222)
Q Consensus 123 ~~~l~~~gv~lvaIs~~s~~----~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~~ 175 (222)
...++..-+.+|.|..|-.+ .+..|+...+.+.++|.....+|-+++|.....
T Consensus 36 ~kaIr~gkakLVIiA~Das~~~~~ki~~~~~~~~~~V~~~~~sk~eLG~A~Gk~~~v 92 (125)
T 3vi6_A 36 LKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRV 92 (125)
T ss_dssp HHHHHTTCCSEEEECTTSCHHHHHHHHHHHHHTTCEEEECSSCHHHHHHHTTCSSCC
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhCCCcEEEcCCHHHHHHHhCCcccE
Confidence 44566666888988888553 334456666777777788889999999997654
No 374
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=25.69 E-value=94 Score=23.49 Aligned_cols=51 Identities=4% Similarity=-0.012 Sum_probs=38.4
Q ss_pred HHHHHhCCCEEEEEcCCCH-----HHHHHHHHHcCCCCceeecCChHHHHHcCCccc
Q 027527 123 KDVMDASGVALVLIGPGSV-----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (222)
Q Consensus 123 ~~~l~~~gv~lvaIs~~s~-----~~i~~f~~~~~~pfpil~Dpd~~lyk~lGl~~~ 174 (222)
...++..-+++|.|..|-. ..+..+|+++++|+-. .+...++.++.|.++.
T Consensus 41 ~kai~~gkakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~-v~sk~eLG~a~G~~~~ 96 (134)
T 2ale_A 41 TKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVF-VPSRVALGRACGVSRP 96 (134)
T ss_dssp HHHHHHTCEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEE-ESCHHHHHHHTTCSSC
T ss_pred HHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEE-ECCHHHHHHHhCCCCC
Confidence 3445566688888877632 3577899999999754 4788899999999876
No 375
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=25.35 E-value=2.3e+02 Score=22.47 Aligned_cols=63 Identities=11% Similarity=-0.013 Sum_probs=41.7
Q ss_pred HHHHhHHHHHhCCC--EEEEEcCCCHHHHHHHHHHcCCC--Ccee--e----------cCC----hHHHHHcCCcc-ccc
Q 027527 118 YLAAKKDVMDASGV--ALVLIGPGSVEQARTFSEQTKFK--GEVY--A----------DPN----HSSYEALSFVS-GVL 176 (222)
Q Consensus 118 ~L~~~~~~l~~~gv--~lvaIs~~s~~~i~~f~~~~~~p--fpil--~----------Dpd----~~lyk~lGl~~-~~~ 176 (222)
.+.+..+.+++.|+ ++..++.+....++...+..++. |+.+ + -|+ ..+.+.+|+.. .-.
T Consensus 146 ~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~ 225 (282)
T 3nuq_A 146 PLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYENA 225 (282)
T ss_dssp HHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHTCCCGGGE
T ss_pred hHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHcCCCCcccE
Confidence 34455667778899 99999988888888888888874 4432 2 223 24566788875 444
Q ss_pred eeec
Q 027527 177 VTFT 180 (222)
Q Consensus 177 ~~~~ 180 (222)
..+.
T Consensus 226 i~vG 229 (282)
T 3nuq_A 226 YFID 229 (282)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 4443
No 376
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=25.31 E-value=2.3e+02 Score=23.66 Aligned_cols=60 Identities=13% Similarity=0.143 Sum_probs=42.4
Q ss_pred HHHHHHhHHHHHhCCCEEEEEcC-CCHHHHHHHHHHcCCCCceeecC-------ChHHHHHcCCcccc
Q 027527 116 ADYLAAKKDVMDASGVALVLIGP-GSVEQARTFSEQTKFKGEVYADP-------NHSSYEALSFVSGV 175 (222)
Q Consensus 116 l~~L~~~~~~l~~~gv~lvaIs~-~s~~~i~~f~~~~~~pfpil~Dp-------d~~lyk~lGl~~~~ 175 (222)
+.++-+....+++.|...|.+-. -+.+.+++++++..+|-.+..-| +.+-.+.+|+.+-.
T Consensus 167 ~~~ai~ra~a~~eAGAd~i~~e~~~~~~~~~~i~~~~~~P~n~~~~~~~~~p~~~~~eL~~lGv~~v~ 234 (255)
T 2qiw_A 167 MVEAIKRIKLMEQAGARSVYPVGLSTAEQVERLVDAVSVPVNITAHPVDGHGAGDLATLAGLGVRRVT 234 (255)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCSHHHHHHHHTTCSSCBEEECBTTTBBTTBCHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHcCCcEEEEcCCCCHHHHHHHHHhCCCCEEEEecCCCCCCCCCHHHHHHcCCCEEE
Confidence 45555556678889999887743 45689999999988887655333 34557778887664
No 377
>2e0i_A 432AA long hypothetical deoxyribodipyrimidine PHO; photolyase, FAD, DNA repair, lyase; HET: FAD; 2.80A {Sulfolobus tokodaii}
Probab=24.93 E-value=1.3e+02 Score=27.22 Aligned_cols=64 Identities=13% Similarity=0.103 Sum_probs=41.0
Q ss_pred CCeEEEEEEcCCC-------ChhH--HHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCCceeecCC
Q 027527 96 DRKAVVAFARHFG-------CVLC--RKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPN 162 (222)
Q Consensus 96 ~~~vvVvF~R~~~-------Cp~C--~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~pfpil~Dpd 162 (222)
+.+++.+|+.... .... +-....|+++.++|++.|+.++.+..+..+.+.++++ ++. .|++|.+
T Consensus 26 ~~~v~~vfi~dp~~~~~~~~~~~~r~~Fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~--~~~-~v~~~~~ 98 (440)
T 2e0i_A 26 CDRVIPVFIADPRQLINNPYKSEFAVSFMINSLLELDDELRKKGSRLNVFFGEAEKVVSRFFN--KVD-AIYVNED 98 (440)
T ss_dssp SSEEEEEEEECHHHHSSCTTCCHHHHHHHHHHHHHHHHHHHTTTCCCEEEESCHHHHHHHHCT--TCS-EEEEECC
T ss_pred CCCEEEEEEeChhhhccCCcCCHHHHHHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHHc--CCC-EEEEecc
Confidence 3567777775321 1222 2245678888999999999988876554467778877 543 3666443
No 378
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=24.91 E-value=68 Score=24.29 Aligned_cols=63 Identities=13% Similarity=0.061 Sum_probs=42.0
Q ss_pred HHHHHhHHHHHhCCCEEEEEcCCC-HHHHHHHHHHcCCC--Cce---eecCC----hHHHHHcCCccccceee
Q 027527 117 DYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKFK--GEV---YADPN----HSSYEALSFVSGVLVTF 179 (222)
Q Consensus 117 ~~L~~~~~~l~~~gv~lvaIs~~s-~~~i~~f~~~~~~p--fpi---l~Dpd----~~lyk~lGl~~~~~~~~ 179 (222)
+...+..+++++.|++++.++..+ ...++.+.+..++. |.. +..++ ..+.+.+|+...-...+
T Consensus 71 ~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i 143 (187)
T 2wm8_A 71 PEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMIFF 143 (187)
T ss_dssp TTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEEESSSCHHHHHHHHHHHHCCCGGGEEEE
T ss_pred hhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcceeEEEeCchHHHHHHHHHHcCCChHHEEEE
Confidence 345556667778899999999887 68888889988886 442 33444 23446677765443344
No 379
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=24.57 E-value=58 Score=25.01 Aligned_cols=35 Identities=11% Similarity=0.136 Sum_probs=27.5
Q ss_pred HhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCC
Q 027527 121 AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (222)
Q Consensus 121 ~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~pf 155 (222)
+..+.+++.|+++.+++.++...++...+..++..
T Consensus 93 ~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~ 127 (225)
T 1nnl_A 93 ELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPA 127 (225)
T ss_dssp HHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCG
T ss_pred HHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCc
Confidence 34556677899999898888888888888888863
No 380
>1vjq_A Designed protein; structural genomics, engineered protein, PSI, protein struct initiative, structural genomics of pathogenic protozoa CONS SGPP; 2.10A {} SCOP: k.43.1.1
Probab=24.06 E-value=51 Score=22.02 Aligned_cols=29 Identities=21% Similarity=0.211 Sum_probs=24.8
Q ss_pred EEEEcCCCHHHHHHHHHHcCCCCceeecC
Q 027527 133 LVLIGPGSVEQARTFSEQTKFKGEVYADP 161 (222)
Q Consensus 133 lvaIs~~s~~~i~~f~~~~~~pfpil~Dp 161 (222)
=|.|.++.....+++.+.++++|.++.+.
T Consensus 42 di~V~p~~~~~f~~~L~~~~i~~~v~i~d 70 (79)
T 1vjq_A 42 VILIPSDMVEWFLEMLKAKGIPFTVYVEE 70 (79)
T ss_dssp EEEECGGGHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEEECHHHHHHHHHHHHHCCCcEEEEehh
Confidence 36788888899999999999999987653
No 381
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=23.77 E-value=67 Score=27.27 Aligned_cols=47 Identities=19% Similarity=0.139 Sum_probs=34.6
Q ss_pred CCh-hHHHHHHHHHHhHHHHHh-CCCEEEEEcCCCHHHHHHHHHHcCCC
Q 027527 108 GCV-LCRKRADYLAAKKDVMDA-SGVALVLIGPGSVEQARTFSEQTKFK 154 (222)
Q Consensus 108 ~Cp-~C~~el~~L~~~~~~l~~-~gv~lvaIs~~s~~~i~~f~~~~~~p 154 (222)
||. .-+.+++.++++...+.+ .+++|++|.--+++..++++++++++
T Consensus 32 G~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~ 80 (393)
T 4fb5_A 32 GTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFE 80 (393)
T ss_dssp CCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCS
T ss_pred cCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCC
Confidence 454 356777788777766643 57899999988888999999998876
No 382
>4hyl_A Stage II sporulation protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 1.75A {Haliangium ochraceum}
Probab=23.73 E-value=1.3e+02 Score=20.93 Aligned_cols=46 Identities=26% Similarity=0.161 Sum_probs=29.7
Q ss_pred HHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC--CceeecCCh
Q 027527 116 ADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK--GEVYADPNH 163 (222)
Q Consensus 116 l~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p--fpil~Dpd~ 163 (222)
+..|.+.+.++++.|.+++.++.. ..+++..+..++. |+++.|.+.
T Consensus 60 l~~L~~~~~~~~~~g~~l~l~~~~--~~v~~~l~~~gl~~~~~i~~~~~~ 107 (117)
T 4hyl_A 60 LRVLLSLYRHTSNQQGALVLVGVS--EEIRDTMEITGFWNFFTACASMDE 107 (117)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCC--HHHHHHHHHHTCGGGCEEESCHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHHhCccceeeecCCHHH
Confidence 556677777777888888777764 3555555666665 566644433
No 383
>2kg4_A Growth arrest and DNA-damage-inducible protein GA alpha; GADD45, flexible regions, monomer cycle; NMR {Homo sapiens}
Probab=23.62 E-value=62 Score=25.77 Aligned_cols=44 Identities=16% Similarity=0.167 Sum_probs=32.7
Q ss_pred HhCCCEEEEEcCCC--HH---------HHHHHHHHcCCCCceeecCChHHHHHcCC
Q 027527 127 DASGVALVLIGPGS--VE---------QARTFSEQTKFKGEVYADPNHSSYEALSF 171 (222)
Q Consensus 127 ~~~gv~lvaIs~~s--~~---------~i~~f~~~~~~pfpil~Dpd~~lyk~lGl 171 (222)
+...+.++.+..|- +. .+..||+++++|+ +++|...++.++.|+
T Consensus 50 ~k~~a~lcvLA~D~d~~~~i~~hi~~~li~alC~E~~Ip~-i~V~s~k~LG~a~Gi 104 (165)
T 2kg4_A 50 DPDNVVLCLLAADEDDDRDVALQIHFTLIQAFCCENDINI-LRVSNPGRLAELLLL 104 (165)
T ss_dssp CTTTEEEEEEECCTGGGGCHHHHHHHHHHHHHHHHTTCCE-EEESCHHHHHHHHHH
T ss_pred CCCcEEEEEEeCCCCccchhhhhccHHHHHHHHHHcCCCE-EEECCHHHHHHHHCC
Confidence 33445666666553 22 3569999999998 788999999999997
No 384
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=23.57 E-value=1.9e+02 Score=24.25 Aligned_cols=17 Identities=0% Similarity=-0.181 Sum_probs=9.5
Q ss_pred hhHHHHHHHHHHHHhhh
Q 027527 183 AGLKIIQSYMEGYRQDW 199 (222)
Q Consensus 183 a~~~~l~~~~~g~r~~~ 199 (222)
.|..++....+.+.++.
T Consensus 272 ~Y~~~m~~n~~~l~~aL 288 (291)
T 1pq4_A 272 DWSSNLKAVAQKIANAN 288 (291)
T ss_dssp SHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 45556665556555544
No 385
>4dkx_A RAS-related protein RAB-6A; GTP binding fold, membrane trafficking, GTP, cytosol, protei transport; HET: GDP; 1.90A {Homo sapiens} PDB: 3bbp_A*
Probab=23.41 E-value=79 Score=25.24 Aligned_cols=76 Identities=17% Similarity=0.209 Sum_probs=38.1
Q ss_pred cEEecCCCCeEeCCCc----cCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCC---------CHHHH
Q 027527 78 VKVYDVNGNAIPISDL----WKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG---------SVEQA 144 (222)
Q Consensus 78 f~L~D~~G~~v~Lsdl----~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~---------s~~~i 144 (222)
+.+.|..|+.. +..+ +.+.-++|+.| ..-.+-.-+.+...-+...+....++.++.|+.- +.+++
T Consensus 64 l~iwDtaGqe~-~~~l~~~~~~~a~~~ilv~-di~~~~Sf~~i~~~~~~i~~~~~~~~piilVgNK~Dl~~~r~V~~~e~ 141 (216)
T 4dkx_A 64 LQLWDTAGLER-FRSLIPSYIRDSAAAVVVY-DITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEG 141 (216)
T ss_dssp EEEECCSCTTT-CGGGHHHHHTTCSEEEEEE-ETTCHHHHHTHHHHHHHHHHHHTTSSEEEEEEECTTCGGGCCSCHHHH
T ss_pred EEEEECCCchh-hhhHHHHHhccccEEEEEe-ecchhHHHHHHHHHHHHHHHhcCCCCeEEEEeeccchHhcCcccHHHH
Confidence 56677777641 2222 12333333333 3334444433332222222233457888888653 34677
Q ss_pred HHHHHHcCCCC
Q 027527 145 RTFSEQTKFKG 155 (222)
Q Consensus 145 ~~f~~~~~~pf 155 (222)
++|+++.+++|
T Consensus 142 ~~~a~~~~~~~ 152 (216)
T 4dkx_A 142 ERKAKELNVMF 152 (216)
T ss_dssp HHHHHHHTCEE
T ss_pred hhHHHHhCCee
Confidence 78888877764
No 386
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=23.29 E-value=1.2e+02 Score=24.79 Aligned_cols=53 Identities=11% Similarity=0.128 Sum_probs=38.7
Q ss_pred HHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC--Cc-eeecCChHHHHHcCCc
Q 027527 120 AAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK--GE-VYADPNHSSYEALSFV 172 (222)
Q Consensus 120 ~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p--fp-il~Dpd~~lyk~lGl~ 172 (222)
.+..+.+++.|+++..++.++...++...+..++. |. ++.++.....+.++..
T Consensus 169 ~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~K~~~~~~l~~~ 224 (287)
T 3a1c_A 169 KPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQAK 224 (287)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCTTCHHHHHHHHTTT
T ss_pred HHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeeeecChHHHHHHHHHHhcC
Confidence 34455677889999999888888888888888876 32 4444455667788877
No 387
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=22.82 E-value=1.8e+02 Score=23.58 Aligned_cols=61 Identities=11% Similarity=0.030 Sum_probs=40.1
Q ss_pred CcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCCc
Q 027527 77 TVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGE 156 (222)
Q Consensus 77 df~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~pfp 156 (222)
.+-+.|.||.-+.-...+ -+...+...++++.|+.++.++--+...+..+.++.+++.+
T Consensus 5 kli~~DlDGTLl~~~~~i---------------------~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~ 63 (288)
T 1nrw_A 5 KLIAIDLDGTLLNSKHQV---------------------SLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTW 63 (288)
T ss_dssp CEEEEECCCCCSCTTSCC---------------------CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCCE
T ss_pred EEEEEeCCCCCCCCCCcc---------------------CHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCc
Confidence 356789999876532211 12233445566788999876666677888888888888766
Q ss_pred ee
Q 027527 157 VY 158 (222)
Q Consensus 157 il 158 (222)
++
T Consensus 64 ~I 65 (288)
T 1nrw_A 64 VI 65 (288)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 388
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=22.62 E-value=1.5e+02 Score=29.16 Aligned_cols=81 Identities=20% Similarity=0.272 Sum_probs=45.0
Q ss_pred cEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCH-HHHHHHHHH----cC
Q 027527 78 VKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQARTFSEQ----TK 152 (222)
Q Consensus 78 f~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~-~~i~~f~~~----~~ 152 (222)
+.+.|.+|+.+...-+ +.+ ++=++.-.+...+.+-+++.++.+|+||.++. .+.++|..+ ..
T Consensus 344 ~a~vd~~G~~l~~~~i----------y~~---~~~~~~~~~~~~l~~li~~~~~~~IaIGngtasret~~~v~~l~~~~~ 410 (785)
T 3bzc_A 344 VAVVDATGKLLDTATV----------YPH---APKNQWDQTLAVLAALCAKHQVELIAIGNGTASRETDKLAGELIKKYP 410 (785)
T ss_dssp EEEECTTSCEEEEEEE----------CCS---GGGCCHHHHHHHHHHHHHHHTCCEEEEESSTTHHHHHHHHHHHHHHCG
T ss_pred EEEECCCCCEEEEEEE----------ecC---CchhHHHHHHHHHHHHHHHcCCCEEEECCCccCHHHHHHHHHHHHhcc
Confidence 5677888887654332 222 11111223445555556778899999999865 344555544 22
Q ss_pred -CCCc-eeecCC-hHHHHHcCC
Q 027527 153 -FKGE-VYADPN-HSSYEALSF 171 (222)
Q Consensus 153 -~pfp-il~Dpd-~~lyk~lGl 171 (222)
.+.+ ++.+++ ..+|.+-..
T Consensus 411 ~~~i~~v~v~e~gArvy~as~~ 432 (785)
T 3bzc_A 411 GMKLTKIMVSEAGASVYSASEL 432 (785)
T ss_dssp GGCCEEEEECCHHHHHHHHSHH
T ss_pred cCCCCEEEEcCCcCCHHHHHHH
Confidence 2333 444444 467776554
No 389
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=22.60 E-value=64 Score=25.67 Aligned_cols=34 Identities=12% Similarity=0.034 Sum_probs=24.9
Q ss_pred EEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEE
Q 027527 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVL 135 (222)
Q Consensus 99 vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lva 135 (222)
+.|.+|-.+-||.|..-.+.|.++.++ .+++|.-
T Consensus 6 ~~I~~~~D~~CP~Cy~~~~~l~~l~~~---~~~~v~~ 39 (226)
T 1r4w_A 6 RVLELFYDVLSPYSWLGFEVLCRYQHL---WNIKLKL 39 (226)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHTTT---SSEEEEE
T ss_pred ceEEEEEeCCChHHHHHHHHHHHHHHH---cCCeEEE
Confidence 457788899999999888888776543 3555544
No 390
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=22.15 E-value=49 Score=26.20 Aligned_cols=83 Identities=6% Similarity=0.003 Sum_probs=57.2
Q ss_pred CCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 027527 75 LDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (222)
Q Consensus 75 apdf~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p 154 (222)
+-.+.+.|. -..+.++-..++-+||.+-+--=|.+.-...+++++.+++.+.+-++|+|.--+.-+-+.|.++ ++
T Consensus 65 a~~l~~~~~---G~~~~~~~~~~~D~vVllGGLAMPk~~v~~e~v~~li~ki~~~~~kiiGvCFms~F~kagW~~~--Id 139 (157)
T 2r47_A 65 ARKLEVTEY---GVELGEISPGNVDVLVLLGGLSMPGIGSDIEDVKKLVEDALEEGGELMGLCYMDMFARAGWYEL--LD 139 (157)
T ss_dssp CEEEEEETT---EEEEEEECCCCEEEEEEEGGGGSTTTSCCHHHHHHHHHHHEEEEEEEEEEEETTHHHHTTHHHH--SC
T ss_pred ceEEEEecC---ceEeccccCCCCCEEEEeccccCCCCCCCHHHHHHHHHHhhcCCCCEEEEEhHHHHHHcCCCcc--CC
Confidence 334455552 3445554334677888887776676666677788888877556778999999998777778664 77
Q ss_pred CceeecCC
Q 027527 155 GEVYADPN 162 (222)
Q Consensus 155 fpil~Dpd 162 (222)
|+.+.|.+
T Consensus 140 FD~iID~~ 147 (157)
T 2r47_A 140 FDCVINAD 147 (157)
T ss_dssp CSEEEEEE
T ss_pred ccEEEEcc
Confidence 77777754
No 391
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=22.06 E-value=44 Score=25.87 Aligned_cols=65 Identities=9% Similarity=0.058 Sum_probs=35.5
Q ss_pred EEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC-CceeecCChHHHHHcCC
Q 027527 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GEVYADPNHSSYEALSF 171 (222)
Q Consensus 100 vVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p-fpil~Dpd~~lyk~lGl 171 (222)
++..|-+..||+|++-.-.|.+. ....+++-|...+. -..|.+.+... .|++.|.+..+++..-+
T Consensus 3 Mm~LY~~~~sP~~~rvr~~L~e~-----gi~~e~~~v~~~~~--~~~~~~~nP~g~vPvL~~~~~~l~ES~aI 68 (210)
T 4hoj_A 3 MMTLYSGITCPFSHRCRFVLYEK-----GMDFEIKDIDIYNK--PEDLAVMNPYNQVPVLVERDLVLHESNII 68 (210)
T ss_dssp -CEEEECTTCHHHHHHHHHHHHH-----TCCCEEEECCTTSC--CHHHHHHCTTCCSCEEEETTEEEESHHHH
T ss_pred eEEEecCCCChHHHHHHHHHHHc-----CCCCEEEEeCCCCC--CHHHHHHCCCCCCcEEEECCEEEeccHHH
Confidence 34566778999999855444432 22345555554432 12455544433 57788877655444333
No 392
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=22.01 E-value=2.3e+02 Score=20.60 Aligned_cols=53 Identities=15% Similarity=0.165 Sum_probs=35.4
Q ss_pred HHHHhHHHH-HhCCCEEEEEcCCCH---HHHHHHHHHcCCCCc-eeecCChHHHHHcC
Q 027527 118 YLAAKKDVM-DASGVALVLIGPGSV---EQARTFSEQTKFKGE-VYADPNHSSYEALS 170 (222)
Q Consensus 118 ~L~~~~~~l-~~~gv~lvaIs~~s~---~~i~~f~~~~~~pfp-il~Dpd~~lyk~lG 170 (222)
+|.+..+++ ++-+..+++|..|+. +.+-.|.+..|...- |++|.|..-.+.|.
T Consensus 37 elkdsieelvkkynativvvvvddkewaekairfvkslgaqvliiiydqdqnrleefs 94 (134)
T 2l69_A 37 ELKDSIEELVKKYNATIVVVVVDDKEWAEKAIRFVKSLGAQVLIIIYDQDQNRLEEFS 94 (134)
T ss_dssp HHHHHHHHHTTCCCCEEEEEECSSHHHHHHHHHHHHHHCCCCEEEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCeEEEEEEccHHHHHHHHHHHHhcCCeEEEEEEeCchhHHHHHH
Confidence 344444444 345777888888876 455578888888754 67888877655554
No 393
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=21.94 E-value=95 Score=23.44 Aligned_cols=34 Identities=12% Similarity=0.225 Sum_probs=27.3
Q ss_pred HhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 027527 121 AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (222)
Q Consensus 121 ~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p 154 (222)
+..+++++.|+.+..++.++.+.++...+..++.
T Consensus 98 ~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 131 (233)
T 3s6j_A 98 ELLETLDKENLKWCIATSGGIDTATINLKALKLD 131 (233)
T ss_dssp HHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCC
T ss_pred HHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchh
Confidence 3455667889999999988888888888888875
No 394
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=21.91 E-value=52 Score=22.88 Aligned_cols=38 Identities=8% Similarity=-0.004 Sum_probs=28.2
Q ss_pred HHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCC
Q 027527 116 ADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (222)
Q Consensus 116 l~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~ 153 (222)
.+...+...++++.|+++..++..+...++...+..++
T Consensus 20 ~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l 57 (137)
T 2pr7_A 20 QRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELET 57 (137)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHH
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCCh
Confidence 45667777888889999999988876666666666554
No 395
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=21.88 E-value=1.2e+02 Score=25.99 Aligned_cols=64 Identities=8% Similarity=0.020 Sum_probs=41.8
Q ss_pred eEEEEEEcCCCChhHHHHHHHHHHhHHHHHhC-CCEEEEEcCCCHHHHHHH-HHHcCCC--Cc--eeecCC
Q 027527 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-GVALVLIGPGSVEQARTF-SEQTKFK--GE--VYADPN 162 (222)
Q Consensus 98 ~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~-gv~lvaIs~~s~~~i~~f-~~~~~~p--fp--il~Dpd 162 (222)
+.+|+ |-..+|+.|.+++..|.+...+++.. .+.++.|..+......+| .+..++. +| ++.+.+
T Consensus 249 ~~~~~-f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl~~~~P~~~i~~~~ 318 (367)
T 3us3_A 249 IHIVA-FAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEKTFDIDLSAPQIGVVNVT 318 (367)
T ss_dssp EEEEE-ECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHHHHHHHTCCTTSCEEEEEETT
T ss_pred cEEEE-EEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccchhHHHHHHHhcCCCCCCCeEEEEecc
Confidence 44544 45678999999999999999999876 488888877654332222 3444443 44 444543
No 396
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=21.87 E-value=1.4e+02 Score=21.95 Aligned_cols=43 Identities=19% Similarity=0.087 Sum_probs=32.4
Q ss_pred HHHHHHHHHhHHHHHhCCCEEEEEcC---C--C-------HHHHHHHHHHcCCCC
Q 027527 113 RKRADYLAAKKDVMDASGVALVLIGP---G--S-------VEQARTFSEQTKFKG 155 (222)
Q Consensus 113 ~~el~~L~~~~~~l~~~gv~lvaIs~---~--s-------~~~i~~f~~~~~~pf 155 (222)
.++...+.++.+++++.+.+++.++. . . .+.+++++++++++|
T Consensus 86 ~~~~~~~~~~i~~~~~~~~~vvl~~~~~p~~~~~~~~~~~~~~~~~~a~~~~~~~ 140 (185)
T 3hp4_A 86 KKMQTNLTALVKKSQAANAMTALMEIYIPPNYGPRYSKMFTSSFTQISEDTNAHL 140 (185)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECCCCCSTTCHHHHHHHHHHHHHHHHHHCCEE
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEEeCCCCCcccHHHHHHHHHHHHHHHHHcCCEE
Confidence 56677888889999999999998873 1 1 145677888888774
No 397
>3t5g_A GTP-binding protein RHEB; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 1xtq_A* 1xtr_A* 1xts_A* 2l0x_A* 3sea_A*
Probab=21.79 E-value=2.3e+02 Score=20.49 Aligned_cols=76 Identities=13% Similarity=0.176 Sum_probs=31.9
Q ss_pred CcEEecCCCCeEeCC----CccCCCeEEEEEEcCCCChhHHHHHHHHH-HhHHHHHhCCCEEEEEcCC---------CHH
Q 027527 77 TVKVYDVNGNAIPIS----DLWKDRKAVVAFARHFGCVLCRKRADYLA-AKKDVMDASGVALVLIGPG---------SVE 142 (222)
Q Consensus 77 df~L~D~~G~~v~Ls----dl~~~~~vvVvF~R~~~Cp~C~~el~~L~-~~~~~l~~~gv~lvaIs~~---------s~~ 142 (222)
.+.+.|..|..- +. .++.+..++|+.| ..-.+...+.+..+. ++...+...++.++.|+.- +.+
T Consensus 55 ~~~l~Dt~G~~~-~~~~~~~~~~~~~~~i~v~-d~~~~~s~~~~~~~~~~~~~~~~~~~~p~ilv~nK~Dl~~~~~~~~~ 132 (181)
T 3t5g_A 55 HLQLVDTAGQDE-YSIFPQTYSIDINGYILVY-SVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHMERVISYE 132 (181)
T ss_dssp EEEEEECCCCCT-TCCCCGGGTTTCSEEEEEE-ETTCHHHHHHHHHHHHHHHHHC----CCEEEEEECTTCTTTCCSCHH
T ss_pred EEEEEeCCCchh-hhHHHHHHHhcCCEEEEEE-ECCCHHHHHHHHHHHHHHHHhcCCCCCCEEEEEECccchhcceecHH
Confidence 356778777531 12 1222333444433 223343333333222 2223333446666666442 235
Q ss_pred HHHHHHHHcCCC
Q 027527 143 QARTFSEQTKFK 154 (222)
Q Consensus 143 ~i~~f~~~~~~p 154 (222)
++++++++.+++
T Consensus 133 ~~~~~~~~~~~~ 144 (181)
T 3t5g_A 133 EGKALAESWNAA 144 (181)
T ss_dssp HHHHHHHHTTCE
T ss_pred HHHHHHHHhCCc
Confidence 566666665553
No 398
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=21.75 E-value=2.7e+02 Score=21.15 Aligned_cols=26 Identities=19% Similarity=0.356 Sum_probs=21.5
Q ss_pred HHHHHHHHHhHHHHHhCCCEEEEEcC
Q 027527 113 RKRADYLAAKKDVMDASGVALVLIGP 138 (222)
Q Consensus 113 ~~el~~L~~~~~~l~~~gv~lvaIs~ 138 (222)
.++...|.++.+++++.|.+++.+++
T Consensus 96 ~~~~~~l~~~i~~~~~~~~~vil~~~ 121 (240)
T 3mil_A 96 PEFIDNIRQMVSLMKSYHIRPIIIGP 121 (240)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 45666888888899899999999986
No 399
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=21.69 E-value=1.2e+02 Score=22.76 Aligned_cols=59 Identities=15% Similarity=0.067 Sum_probs=39.0
Q ss_pred HhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC--C--c-eeecCC----------hHHHHHcCCccccceee
Q 027527 121 AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK--G--E-VYADPN----------HSSYEALSFVSGVLVTF 179 (222)
Q Consensus 121 ~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p--f--p-il~Dpd----------~~lyk~lGl~~~~~~~~ 179 (222)
++.+.+++.|+.+..++.+..+.++...+..++. | . ++.... ..+.+.+|+...-...+
T Consensus 77 ~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~~~~i~i 150 (205)
T 3m9l_A 77 ELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRMVMV 150 (205)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCGGGEEEE
T ss_pred HHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCHHHEEEE
Confidence 3456677889999999998888888888888874 4 3 333221 34556677765444444
No 400
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=21.54 E-value=1.3e+02 Score=23.93 Aligned_cols=56 Identities=9% Similarity=0.087 Sum_probs=35.8
Q ss_pred CcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEc---CCCHHHHHHHHHHcCC
Q 027527 77 TVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG---PGSVEQARTFSEQTKF 153 (222)
Q Consensus 77 df~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs---~~s~~~i~~f~~~~~~ 153 (222)
..-+.|.||..+.-... ++.-.+...+++++|+.++.++ .-+...+.++.++.++
T Consensus 6 kli~~DlDGTLl~~~~~----------------------i~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~ 63 (264)
T 3epr_A 6 KGYLIDLDGTIYKGKSR----------------------IPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNV 63 (264)
T ss_dssp CEEEECCBTTTEETTEE----------------------CHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTC
T ss_pred CEEEEeCCCceEeCCEE----------------------CcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 45678999987654321 1223344455667788888887 4456777777777776
Q ss_pred C
Q 027527 154 K 154 (222)
Q Consensus 154 p 154 (222)
+
T Consensus 64 ~ 64 (264)
T 3epr_A 64 E 64 (264)
T ss_dssp C
T ss_pred C
Confidence 5
No 401
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural GENO PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A*
Probab=21.31 E-value=1.5e+02 Score=21.15 Aligned_cols=62 Identities=11% Similarity=0.173 Sum_probs=38.6
Q ss_pred eEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC--CceeecCC
Q 027527 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK--GEVYADPN 162 (222)
Q Consensus 98 ~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p--fpil~Dpd 162 (222)
+.||+.+.+-.-.... =+..|.+.+.++++.|+.++.++.. +.+++..+..++. |+++.+.+
T Consensus 53 ~~vvlDls~V~~iDSs-Gl~~L~~~~~~~~~~g~~l~l~~~~--~~v~~~l~~~gl~~~~~i~~s~~ 116 (125)
T 2ka5_A 53 NKIFLVLSDVESIDSF-SLGVIVNILKSISSSGGFFALVSPN--EKVERVLSLTNLDRIVKIYDTIS 116 (125)
T ss_dssp CEEEEECTTCSCCCHH-HHHHHHHHHHHHHHHTCEEEEECCC--HHHHHHHHHTTSTTTSEEESSHH
T ss_pred CEEEEECCCCCEEcHH-HHHHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHHcCCCceEEecCCHH
Confidence 4566666543222222 2567777777888888888887765 3566666777765 56665443
No 402
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=21.12 E-value=1.1e+02 Score=26.59 Aligned_cols=47 Identities=11% Similarity=0.030 Sum_probs=34.0
Q ss_pred CChh-HHHHHHHHHHhHHHHH--hCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 027527 108 GCVL-CRKRADYLAAKKDVMD--ASGVALVLIGPGSVEQARTFSEQTKFK 154 (222)
Q Consensus 108 ~Cp~-C~~el~~L~~~~~~l~--~~gv~lvaIs~~s~~~i~~f~~~~~~p 154 (222)
||.. -+.+++.|++.-..+. ..+++|++|.--+++.+++++++++.+
T Consensus 33 G~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~ 82 (412)
T 4gqa_A 33 GSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAE 82 (412)
T ss_dssp CCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCS
T ss_pred cCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCC
Confidence 4542 4566777766544332 247899999988999999999998875
No 403
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A
Probab=21.09 E-value=2e+02 Score=19.35 Aligned_cols=42 Identities=12% Similarity=0.060 Sum_probs=26.0
Q ss_pred HHHHHHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC--Cceee
Q 027527 116 ADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK--GEVYA 159 (222)
Q Consensus 116 l~~L~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p--fpil~ 159 (222)
+..|.+...++++.|.++..++.. +.+++..+..++. |+++.
T Consensus 62 l~~L~~~~~~~~~~g~~l~l~~~~--~~v~~~l~~~gl~~~~~i~~ 105 (110)
T 1sbo_A 62 LGTLVVILKDAKINGKEFILSSLK--ESISRILKLTHLDKIFKITD 105 (110)
T ss_dssp HHHHHHHHHHHHHTTCEEEEESCC--HHHHHHHHHTTCGGGSCBCS
T ss_pred HHHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHHhCccceeeccC
Confidence 456666667777778777766654 3556666666654 44443
No 404
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=20.96 E-value=1e+02 Score=23.36 Aligned_cols=38 Identities=5% Similarity=0.039 Sum_probs=30.4
Q ss_pred HHHHHhHHHHHhCCCEEEEEcCCCH---HHHHHHHHHcCCC
Q 027527 117 DYLAAKKDVMDASGVALVLIGPGSV---EQARTFSEQTKFK 154 (222)
Q Consensus 117 ~~L~~~~~~l~~~gv~lvaIs~~s~---~~i~~f~~~~~~p 154 (222)
+.+.+..+++++.|+++.+++..+. +.++...+..++.
T Consensus 37 ~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 37 KNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp TTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred cCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 4556667778889999999987665 7888889998875
No 405
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=20.88 E-value=1.2e+02 Score=22.78 Aligned_cols=60 Identities=15% Similarity=0.120 Sum_probs=38.5
Q ss_pred HHhHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC--Cce--eecC------C----hHHHHHcCCccccceee
Q 027527 120 AAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK--GEV--YADP------N----HSSYEALSFVSGVLVTF 179 (222)
Q Consensus 120 ~~~~~~l~~~gv~lvaIs~~s~~~i~~f~~~~~~p--fpi--l~Dp------d----~~lyk~lGl~~~~~~~~ 179 (222)
.+..+.+++.|+.+..++.+..+.++...+..++. |+. ..|. + ..+.+.+|+...-...+
T Consensus 92 ~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~i 165 (226)
T 3mc1_A 92 EALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMI 165 (226)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEE
T ss_pred HHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEEE
Confidence 34455667788999888888888888888888876 442 2232 1 33566777765533333
No 406
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=20.62 E-value=1.4e+02 Score=22.25 Aligned_cols=43 Identities=7% Similarity=0.004 Sum_probs=31.4
Q ss_pred HHHHHHHHHhHHHHHhCCCEEEEEcCC-C-----------HHHHHHHHHHcCCCC
Q 027527 113 RKRADYLAAKKDVMDASGVALVLIGPG-S-----------VEQARTFSEQTKFKG 155 (222)
Q Consensus 113 ~~el~~L~~~~~~l~~~gv~lvaIs~~-s-----------~~~i~~f~~~~~~pf 155 (222)
.++...+.++.+.+++.|.+++.|+.- . .+.+++++++++++|
T Consensus 82 ~~~~~~l~~li~~~~~~~~~vil~~~~~p~~~~~~~~~~~n~~~~~~a~~~~v~~ 136 (190)
T 1ivn_A 82 QQTEQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDVPL 136 (190)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECCCCCGGGCHHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeccCCcchhHHHHHHHHHHHHHHHHHcCCeE
Confidence 556778888889998889999988741 1 134677888887764
No 407
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=20.40 E-value=1.9e+02 Score=22.82 Aligned_cols=56 Identities=7% Similarity=-0.035 Sum_probs=36.8
Q ss_pred CcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhHHHHHHHHHHhHHHHHhCCCEEEEEcC---CCHHHHHHHHHHcCC
Q 027527 77 TVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP---GSVEQARTFSEQTKF 153 (222)
Q Consensus 77 df~L~D~~G~~v~Lsdl~~~~~vvVvF~R~~~Cp~C~~el~~L~~~~~~l~~~gv~lvaIs~---~s~~~i~~f~~~~~~ 153 (222)
..-+.|.||..+.-... .+.-.+...+++++|+.++.++- -+...+.++.++.++
T Consensus 9 kli~~DlDGTLl~~~~~----------------------~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~ 66 (268)
T 3qgm_A 9 KGYIIDIDGVIGKSVTP----------------------IPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGL 66 (268)
T ss_dssp SEEEEECBTTTEETTEE----------------------CHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTC
T ss_pred CEEEEcCcCcEECCCEe----------------------CcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCC
Confidence 45678999997653221 22334455666788999887765 355677777777777
Q ss_pred C
Q 027527 154 K 154 (222)
Q Consensus 154 p 154 (222)
+
T Consensus 67 ~ 67 (268)
T 3qgm_A 67 E 67 (268)
T ss_dssp C
T ss_pred C
Confidence 5
No 408
>1m0f_B GPB, scaffolding protein B; bacteriophage, cryo electron microscopy, procapsid, morphogenesis, microviridae, assembly; 16.00A {Enterobacteria phage ALPHA3} SCOP: i.6.1.1
Probab=20.12 E-value=27 Score=23.51 Aligned_cols=28 Identities=21% Similarity=0.364 Sum_probs=19.7
Q ss_pred EEcCCCChhHHHHHHHHHHhHHHHHhCCCEE
Q 027527 103 FARHFGCVLCRKRADYLAAKKDVMDASGVAL 133 (222)
Q Consensus 103 F~R~~~Cp~C~~el~~L~~~~~~l~~~gv~l 133 (222)
|-|+++|..|-+. -++.+..|++.+..|
T Consensus 22 ~~R~fG~A~~ddk---~a~~ya~FD~nd~rv 49 (68)
T 1m0f_B 22 CSRRFGGATCDDK---SAQIYARFDKNDWRI 49 (68)
T ss_pred HHHHcCCCCcchh---hHHHHhccCcCccee
Confidence 4589999999864 445677777666554
Done!