BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>027531
MNPSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDA
VPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIW
KFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSPGSLTISFSKDGSIPKDGVAVIE
SNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTSDKMK

High Scoring Gene Products

Symbol, full name Information P value
TT5
TRANSPARENT TESTA 5
protein from Arabidopsis thaliana 1.1e-76
CHIL
chalcone isomerase like
protein from Arabidopsis thaliana 7.5e-18
FAP3
fatty-acid-binding protein 3
protein from Arabidopsis thaliana 4.6e-12
FAP1
fatty-acid-binding protein 1
protein from Arabidopsis thaliana 3.0e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  027531
        (222 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2097228 - symbol:TT5 "TRANSPARENT TESTA 5" spe...   772  1.1e-76   1
TAIR|locus:2153539 - symbol:CHIL "chalcone isomerase like...   217  7.5e-18   1
TAIR|locus:2024877 - symbol:FAP3 "fatty-acid-binding prot...   165  4.6e-12   1
TAIR|locus:2077229 - symbol:FAP1 "fatty-acid-binding prot...   128  3.0e-06   1


>TAIR|locus:2097228 [details] [associations]
            symbol:TT5 "TRANSPARENT TESTA 5" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
            [GO:0009813 "flavonoid biosynthetic process" evidence=IEA;RCA;IMP]
            [GO:0016872 "intramolecular lyase activity" evidence=IEA]
            [GO:0042398 "cellular modified amino acid biosynthetic process"
            evidence=IEA] [GO:0045430 "chalcone isomerase activity"
            evidence=IEA;IMP] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0009705
            "plant-type vacuole membrane" evidence=IDA] [GO:0042406 "extrinsic
            to endoplasmic reticulum membrane" evidence=IDA] [GO:0010224
            "response to UV-B" evidence=RCA;IMP] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0080167 "response to karrikin" evidence=IEP]
            [GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0009718
            "anthocyanin-containing compound biosynthetic process"
            evidence=RCA] [GO:0009744 "response to sucrose stimulus"
            evidence=RCA] [GO:0009411 "response to UV" evidence=IMP]
            InterPro:IPR016087 InterPro:IPR016088 Pfam:PF02431
            UniPathway:UPA00154 GO:GO:0005634 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0080167 EMBL:AL132970
            GO:GO:0009705 SUPFAM:SSF54626 GO:GO:0042406 GO:GO:0010224
            GO:GO:0009813 EMBL:M86358 EMBL:AJ287299 EMBL:AJ287300 EMBL:AJ287301
            EMBL:AJ287302 EMBL:AJ287303 EMBL:AJ287304 EMBL:AJ287305
            EMBL:AJ287306 EMBL:AJ287307 EMBL:AJ287308 EMBL:AJ287309
            EMBL:AJ287310 EMBL:AJ287311 EMBL:AJ287312 EMBL:AJ287313
            EMBL:AJ287314 EMBL:AJ287315 EMBL:AJ287316 EMBL:AJ287317
            EMBL:AJ287318 EMBL:AJ287319 EMBL:AJ287320 EMBL:AJ287321
            EMBL:AJ492461 EMBL:AJ492462 EMBL:AJ492463 EMBL:AJ492464
            EMBL:AJ492465 EMBL:AJ492466 EMBL:AJ492467 EMBL:AJ492468
            EMBL:AJ492469 EMBL:AJ492470 EMBL:AJ492471 EMBL:AJ492472
            EMBL:AJ492473 EMBL:AJ492474 EMBL:AJ492475 EMBL:AJ492476
            EMBL:AJ492477 EMBL:AJ492478 EMBL:AJ492479 EMBL:AJ492480
            EMBL:AJ492481 EMBL:AJ492482 EMBL:AJ492483 EMBL:AJ492484
            EMBL:AJ492485 EMBL:AJ492486 EMBL:AJ492487 EMBL:AJ492488
            EMBL:AJ492489 EMBL:AJ492490 EMBL:AJ492491 EMBL:AJ492492
            EMBL:AJ492493 EMBL:AJ492494 EMBL:AJ492495 EMBL:AJ492496
            EMBL:AJ492497 EMBL:AJ492498 EMBL:AJ492499 EMBL:AJ492500
            EMBL:AJ492501 EMBL:AJ492502 EMBL:AJ492503 EMBL:AJ418046
            EMBL:AF439537 EMBL:BT004265 EMBL:BT005528 EMBL:AY086088
            IPI:IPI00534732 PIR:JQ1687 PIR:T47651 RefSeq:NP_191072.1
            UniGene:At.27425 PDB:4DOI PDBsum:4DOI ProteinModelPortal:P41088
            SMR:P41088 IntAct:P41088 STRING:P41088 PaxDb:P41088 PRIDE:P41088
            EnsemblPlants:AT3G55120.1 GeneID:824678 KEGG:ath:AT3G55120
            TAIR:At3g55120 eggNOG:NOG286273 HOGENOM:HOG000006208
            InParanoid:P41088 KO:K01859 OMA:ENCVAFW PhylomeDB:P41088
            ProtClustDB:PLN02559 Genevestigator:P41088 GermOnline:AT3G55120
            GO:GO:0045430 Gene3D:3.50.70.10 Uniprot:P41088
        Length = 246

 Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
 Identities = 149/220 (67%), Positives = 181/220 (82%)

Query:     2 NPSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAV 61
             +P P+VT+L V++VTF PSV+ P S+   FLGGAG RGL+I+GKFV FT IGVYLE +AV
Sbjct:    11 SPFPAVTKLHVDSVTFVPSVKSPASSNPLFLGGAGVRGLDIQGKFVIFTVIGVYLEGNAV 70

Query:    62 PLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWK 121
             P L+ KWKGKT EELTES+ FFR++VTG FEKF+KVTM LPLTG QYSEKV ENC+AIWK
Sbjct:    71 PSLSVKWKGKTTEELTESIPFFREIVTGAFEKFIKVTMKLPLTGQQYSEKVTENCVAIWK 130

Query:   122 FFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIE 180
               G+YTD EAKA+EKF E+FK+E FPPGSSILF  SP GSLT++FSKD SIP+ G+AVIE
Sbjct:   131 QLGLYTDCEAKAVEKFLEIFKEETFPPGSSILFALSPTGSLTVAFSKDDSIPETGIAVIE 190

Query:   181 SNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTSDK 220
             + LL+EAVLES+IGKNGVSP  + S+AER+S L+    D+
Sbjct:   191 NKLLAEAVLESIIGKNGVSPGTRLSVAERLSQLMMKNKDE 230


>TAIR|locus:2153539 [details] [associations]
            symbol:CHIL "chalcone isomerase like" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
            [GO:0009813 "flavonoid biosynthetic process" evidence=IEA;RCA]
            [GO:0016872 "intramolecular lyase activity" evidence=IEA]
            [GO:0042398 "cellular modified amino acid biosynthetic process"
            evidence=IEA] [GO:0045430 "chalcone isomerase activity"
            evidence=IEA] [GO:0080167 "response to karrikin" evidence=IEP]
            [GO:0009718 "anthocyanin-containing compound biosynthetic process"
            evidence=RCA] [GO:0009744 "response to sucrose stimulus"
            evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
            InterPro:IPR016087 InterPro:IPR016088 Pfam:PF02431 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0080167 SUPFAM:SSF54626
            GO:GO:0009813 GO:GO:0045430 Gene3D:3.50.70.10 EMBL:AY063786
            EMBL:AY096448 EMBL:AY088019 IPI:IPI00533938 RefSeq:NP_568154.1
            RefSeq:NP_850770.1 UniGene:At.27434 PDB:4DOK PDBsum:4DOK
            HSSP:P28012 ProteinModelPortal:Q8VZW3 SMR:Q8VZW3 STRING:Q8VZW3
            PRIDE:Q8VZW3 EnsemblPlants:AT5G05270.1 EnsemblPlants:AT5G05270.2
            GeneID:830409 KEGG:ath:AT5G05270 TAIR:At5g05270 eggNOG:NOG261120
            HOGENOM:HOG000243947 InParanoid:Q8VZW3 OMA:VEFFQSK PhylomeDB:Q8VZW3
            ProtClustDB:PLN02804 ArrayExpress:Q8VZW3 Genevestigator:Q8VZW3
            Gene3D:1.10.890.20 InterPro:IPR016089 Uniprot:Q8VZW3
        Length = 209

 Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
 Identities = 68/211 (32%), Positives = 102/211 (48%)

Query:     8 TEL-QVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAG 66
             TE+  V  V F P +    ++K   L G G   +EI    VKFTAIGVYL+   V     
Sbjct:     3 TEMVMVHEVPFPPQII---TSKPLSLLGQGITDIEIHFLQVKFTAIGVYLDPSDVKTHLD 59

Query:    67 KWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAI-WKFFGI 125
              WKGKT +EL    +FF  + +   EK ++V +I  + GAQY  ++ EN +         
Sbjct:    60 NWKGKTGKELAGDDDFFDALASAEMEKVIRVVVIKEIKGAQYGVQL-ENTVRDRLAEEDK 118

Query:   126 YTDAEAKAIEKFTEVFKDEIFPPGSSIL--FTQSPGSLTISFSKDGSIPKDGVAVIESNL 183
             Y + E   +EK    F+ + F   S I   F+   G   I F  +G   ++ + V  +N+
Sbjct:   119 YEEEEETELEKVVGFFQSKYFKANSVITYHFSAKDGICEIGFETEGK-EEEKLKVENANV 177

Query:   184 LSEAVLESMIGKNGVSPAAKKSLAERISALL 214
             +       + G  GVSP+   S+A+ ISA+L
Sbjct:   178 VGMMQRWYLSGSRGVSPSTIVSIADSISAVL 208


>TAIR|locus:2024877 [details] [associations]
            symbol:FAP3 "fatty-acid-binding protein 3" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=IDA]
            [GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0005504 "fatty
            acid binding" evidence=IPI] [GO:0006631 "fatty acid metabolic
            process" evidence=IMP] InterPro:IPR016087 InterPro:IPR016088
            Pfam:PF02431 EMBL:CP002684 GO:GO:0009570 GO:GO:0006631
            GO:GO:0005504 SUPFAM:SSF54626 GO:GO:0009813 EMBL:AC024260
            GO:GO:0045430 Gene3D:3.50.70.10 EMBL:BT025725 IPI:IPI00531223
            PIR:D96575 RefSeq:NP_175757.1 UniGene:At.37393 PDB:4DOL PDBsum:4DOL
            ProteinModelPortal:Q9C8L2 SMR:Q9C8L2 STRING:Q9C8L2 PRIDE:Q9C8L2
            EnsemblPlants:AT1G53520.1 GeneID:841787 KEGG:ath:AT1G53520
            TAIR:At1g53520 InParanoid:Q9C8L2 OMA:IIGVKVY PhylomeDB:Q9C8L2
            ProtClustDB:PLN02311 Genevestigator:Q9C8L2 Uniprot:Q9C8L2
        Length = 287

 Score = 165 (63.1 bits), Expect = 4.6e-12, P = 4.6e-12
 Identities = 54/204 (26%), Positives = 96/204 (47%)

Query:    14 NVTFTPSVQPPGSTKSHFLGGAG--ERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGK 71
             +V F  SV  PG +    L G G  E+   I G  VK  A G Y+ +  +  L+  W G+
Sbjct:    90 SVKFKRSVTLPGCSSPLSLLGTGFREKKFAIIG--VKVYAAGYYVNESILSGLSA-WTGR 146

Query:    72 TAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEA 131
             +A+E+      F  +     EK +++ ++  + G  + + + E   AI       +  + 
Sbjct:   147 SADEIQRDSSLFVSIFQAQAEKSLQIVLVRDVDGKTFWDALDE---AISPRIKSPSSEDT 203

Query:   132 KAIEKFTEVFKDEIFPPGSSILFTQ-SPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLE 190
              A+  F  +F++     GS IL T  +  ++ +S S  G +P +  A IES  ++ A+ +
Sbjct:   204 TALSTFRGIFQNRPLNKGSVILLTWINTSNMLVSVSS-GGLPTNVDATIESGNVTSALFD 262

Query:   191 SMIGKNGVSPAAKKSLAERISALL 214
                G + VSP  K S+A +++  L
Sbjct:   263 VFFGDSPVSPTLKSSVANQLAMTL 286


>TAIR|locus:2077229 [details] [associations]
            symbol:FAP1 "fatty-acid-binding protein 1" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
            [GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0009536 "plastid" evidence=IDA]
            [GO:0005504 "fatty acid binding" evidence=IPI] [GO:0006631 "fatty
            acid metabolic process" evidence=IMP] [GO:0009570 "chloroplast
            stroma" evidence=IDA] InterPro:IPR016087 InterPro:IPR016088
            Pfam:PF02431 GO:GO:0005739 GO:GO:0009570 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006631 GO:GO:0009941 GO:GO:0005504
            SUPFAM:SSF54626 GO:GO:0009813 GO:GO:0045430 Gene3D:3.50.70.10
            EMBL:AL138648 eggNOG:NOG131481 UniGene:At.28579 UniGene:At.48805
            EMBL:AY065149 EMBL:AY081626 EMBL:AY088229 IPI:IPI00523813
            PIR:T48106 RefSeq:NP_567140.1 PDB:4DOO PDBsum:4DOO
            ProteinModelPortal:Q9M1X2 SMR:Q9M1X2 PRIDE:Q9M1X2
            EnsemblPlants:AT3G63170.1 GeneID:825492 KEGG:ath:AT3G63170
            TAIR:At3g63170 HOGENOM:HOG000242388 InParanoid:Q9M1X2 OMA:MTVRLQI
            PhylomeDB:Q9M1X2 ProtClustDB:PLN03174 ArrayExpress:Q9M1X2
            Genevestigator:Q9M1X2 Uniprot:Q9M1X2
        Length = 279

 Score = 128 (50.1 bits), Expect = 3.0e-06, P = 3.0e-06
 Identities = 47/196 (23%), Positives = 89/196 (45%)

Query:    23 PPGSTKSHFLGGAGERGLEIEG-KFVKFTAIGVYLE-DDAVPLLAGKWKGKTAEELTESV 80
             P     S  L G G R   + G K +   A GVY + DD   L+  K+    A E+  + 
Sbjct:    88 PASIGDSRRLLGVGLRKKSLLGLKNIDVYAFGVYADCDDVKKLVGDKYANLPASEIRGNK 147

Query:    81 EFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIA--IWKFFGIYTDAEAKAIEKFT 138
              F  D++    +  +++ ++      +      +  +   + KF G   D   + ++ FT
Sbjct:   148 SFMDDLMEADIKMTIRLQIVYGKLNIRSVRNAFQESVGNRLKKFGGSDND---ELLQSFT 204

Query:   139 EVFKDEI-FPPGSSILFTQSPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNG 197
              +FKDE   P  S+I  T+ PG + +S + +G+     V  ++S+LL  ++L+  IG+  
Sbjct:   205 SLFKDEYKIPRNSTIDLTKDPGHV-LSVAIEGN----HVGSVKSHLLCRSILDLYIGEEP 259

Query:   198 VSPAAKKSLAERISAL 213
                 A++   +  ++L
Sbjct:   260 FDKNAREDFLDNAASL 275


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.132   0.372    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      222       222   0.00096  112 3  11 23  0.44    33
                                                     32  0.40    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  579 (62 KB)
  Total size of DFA:  150 KB (2091 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.18u 0.19s 20.37t   Elapsed:  00:00:01
  Total cpu time:  20.18u 0.19s 20.37t   Elapsed:  00:00:01
  Start:  Fri May 10 21:20:39 2013   End:  Fri May 10 21:20:40 2013

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