BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027536
(222 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ET7|A Chain A, Structural And Spectroscopic Insights Into The Mechanism
Of Oxalate Oxidase
Length = 201
Score = 143 bits (360), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 116/202 (57%), Gaps = 6/202 (2%)
Query: 24 TDPPPLQDFCIADTASPSSFYNNGVPCLNPNSAVSSHFVTSALAKPGKTSGNIFGFNATL 83
+DP PLQDFC+AD + NG C + A +S L K G TS G T
Sbjct: 1 SDPDPLQDFCVADLDG-KAVSVNGHTCKPMSEAGDDFLFSSKLTKAGNTS-TPNGSAVTE 58
Query: 84 TNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVTICLKGALLVGFVDTL---GRL 140
+ PG NT+G++MAR+D A G PPH HPRA+E+ + +KG LLVG + +L +L
Sbjct: 59 LDVAEWPGTNTLGVSMARVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKL 118
Query: 141 FTQQLRPGDSFVFPKGLIHFLYNMDSSKPALALSGLSSQNPGLQMTSMATFASKPPIPDE 200
+++ +R G++FV P+GL+HF +N+ ++ + +S +SQNPG+ + F S PPIP
Sbjct: 119 YSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVS-FNSQNPGIVFVPLTLFGSDPPIPTP 177
Query: 201 VLKKAFQITRQDVSIIRKNLGG 222
VL KA ++ V +++ G
Sbjct: 178 VLTKALRVEAGVVELLKSKFAG 199
>pdb|1FI2|A Chain A, Crystal Structure Of Germin (Oxalate Oxidase)
pdb|2ET1|A Chain A, Oxalate Oxidase In Complex With Substrate Analogue
Glycolate
Length = 201
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 115/202 (56%), Gaps = 6/202 (2%)
Query: 24 TDPPPLQDFCIADTASPSSFYNNGVPCLNPNSAVSSHFVTSALAKPGKTSGNIFGFNATL 83
TDP PLQDFC+AD + NG C + A +S L K G TS G T
Sbjct: 1 TDPDPLQDFCVADLDG-KAVSVNGHTCKPMSEAGDDFLFSSKLTKAGNTS-TPNGSAVTE 58
Query: 84 TNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVTICLKGALLVGFVDTL---GRL 140
+ PG NT+G++M R+D A G PPH HPRA+E+ + +KG LLVG + +L +L
Sbjct: 59 LDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKL 118
Query: 141 FTQQLRPGDSFVFPKGLIHFLYNMDSSKPALALSGLSSQNPGLQMTSMATFASKPPIPDE 200
+++ +R G++FV P+GL+HF +N+ ++ + +S +SQNPG+ + F S PPIP
Sbjct: 119 YSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVS-FNSQNPGIVFVPLTLFGSDPPIPTP 177
Query: 201 VLKKAFQITRQDVSIIRKNLGG 222
VL KA ++ V +++ G
Sbjct: 178 VLTKALRVEAGVVELLKSKFAG 199
>pdb|2ETE|A Chain A, Recombinant Oxalate Oxidase In Complex With Glycolate
pdb|2ETE|B Chain B, Recombinant Oxalate Oxidase In Complex With Glycolate
Length = 201
Score = 140 bits (353), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 115/202 (56%), Gaps = 6/202 (2%)
Query: 24 TDPPPLQDFCIADTASPSSFYNNGVPCLNPNSAVSSHFVTSALAKPGKTSGNIFGFNATL 83
+DP PLQDFC+AD + NG C + A +S L K G TS G T
Sbjct: 1 SDPDPLQDFCVADLDG-KAVSVNGHTCKPMSEAGDDFLFSSKLTKAGNTS-TPNGSAVTE 58
Query: 84 TNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVTICLKGALLVGFVDTL---GRL 140
+ PG NT+G++M R+D A G PPH HPRA+E+ + +KG LLVG + +L +L
Sbjct: 59 LDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKL 118
Query: 141 FTQQLRPGDSFVFPKGLIHFLYNMDSSKPALALSGLSSQNPGLQMTSMATFASKPPIPDE 200
+++ +R G++FV P+GL+HF +N+ ++ + +S +SQNPG+ + F S PPIP
Sbjct: 119 YSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVS-FNSQNPGIVFVPLTLFGSDPPIPTP 177
Query: 201 VLKKAFQITRQDVSIIRKNLGG 222
VL KA ++ V +++ G
Sbjct: 178 VLTKALRVEAGVVELLKSKFAG 199
>pdb|3EHK|A Chain A, Crystal Structure Of Pru Du Amandin, An Allergenic Protein
From Prunus Dulcis
pdb|3EHK|B Chain B, Crystal Structure Of Pru Du Amandin, An Allergenic Protein
From Prunus Dulcis
pdb|3EHK|C Chain C, Crystal Structure Of Pru Du Amandin, An Allergenic Protein
From Prunus Dulcis
pdb|3EHK|D Chain D, Crystal Structure Of Pru Du Amandin, An Allergenic Protein
From Prunus Dulcis
pdb|3EHK|E Chain E, Crystal Structure Of Pru Du Amandin, An Allergenic Protein
From Prunus Dulcis
pdb|3EHK|F Chain F, Crystal Structure Of Pru Du Amandin, An Allergenic Protein
From Prunus Dulcis
pdb|3FZ3|A Chain A, Crystal Structure Of Almond Pru1 Protein
pdb|3FZ3|B Chain B, Crystal Structure Of Almond Pru1 Protein
pdb|3FZ3|C Chain C, Crystal Structure Of Almond Pru1 Protein
pdb|3FZ3|D Chain D, Crystal Structure Of Almond Pru1 Protein
pdb|3FZ3|E Chain E, Crystal Structure Of Almond Pru1 Protein
pdb|3FZ3|F Chain F, Crystal Structure Of Almond Pru1 Protein
Length = 531
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 26/147 (17%)
Query: 85 NTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVTICLKGALLVGFVDTLGR-LFTQ 143
N+ NLP + + L+ R NGI PH + A V ++G V V+ G + Q
Sbjct: 382 NSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQ 441
Query: 144 QLRPGDSFVFP-----------KGLIHFLYNMDSSKPALALSGLSSQNPGLQMTSMATFA 192
+++ G F+ P +G +F + + + L+G +S F
Sbjct: 442 EVQQGQLFIVPQNHGVIQQAGNQGFEYFAFKTEENAFINTLAGRTS------------FL 489
Query: 193 SKPPIPDEVLKKAFQITRQDVSIIRKN 219
+PDEVL A+QI+R+ ++ N
Sbjct: 490 R--ALPDEVLANAYQISREQARQLKYN 514
>pdb|2UY8|A Chain A, R92a Mutant Of Bacillus Subtilis Oxalate Decarboxylase
Oxdc
Length = 385
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 10/139 (7%)
Query: 78 GFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVTICLKGALLVGFVDTL 137
G A + LP + R+ A I H H A E + G+ V VD
Sbjct: 62 GGYAREVTVRELPISENLASVNMRLKPGA--IAELHWHKEA-EWAYMIYGSARVTIVDEK 118
Query: 138 GRLFTQQLRPGDSFVFPKGLIHFLYNMDSSKPALAL--SGLSSQNPGLQMTSMATFASKP 195
GR F + GD + FP GL H + ++ L + G S+N Q+T
Sbjct: 119 GRSFIDDVGEGDLWYFPSGLPHSIQALEEGAEFLLVFDDGSFSENSTFQLTDWLAHT--- 175
Query: 196 PIPDEVLKKAFQITRQDVS 214
P EV+ F +T++++S
Sbjct: 176 --PKEVIAANFGVTKEEIS 192
>pdb|1L3J|A Chain A, Crystal Structure Of Oxalate Decarboxylase Formate Complex
pdb|1UW8|A Chain A, Crystal Structure Of Oxalate Decarboxylase
Length = 385
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Query: 113 HTHPRASEVTICLKGALLVGFVDTLGRLFTQQLRPGDSFVFPKGLIHFLYNMDSSKPALA 172
H H A E + G+ V VD GR F + GD + FP GL H + ++ L
Sbjct: 95 HWHKEA-EWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEEGAEFLL 153
Query: 173 L--SGLSSQNPGLQMTSMATFASKPPIPDEVLKKAFQITRQDVS 214
+ G S+N Q+T P EV+ F +T++++S
Sbjct: 154 VFDDGSFSENSTFQLTDWLAHT-----PKEVIAANFGVTKEEIS 192
>pdb|1J58|A Chain A, Crystal Structure Of Oxalate Decarboxylase
Length = 385
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Query: 113 HTHPRASEVTICLKGALLVGFVDTLGRLFTQQLRPGDSFVFPKGLIHFLYNMDSSKPALA 172
H H A E + G+ V VD GR F + GD + FP GL H + ++ L
Sbjct: 95 HWHKEA-EWAYXIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEEGAEFLL 153
Query: 173 L--SGLSSQNPGLQMTSMATFASKPPIPDEVLKKAFQITRQDVS 214
+ G S+N Q+T P EV+ F +T++++S
Sbjct: 154 VFDDGSFSENSTFQLTDWLAHT-----PKEVIAANFGVTKEEIS 192
>pdb|3S0M|A Chain A, A Structural Element That Modulates Proton-Coupled
Electron Transfer In Oxalate Decarboxylase
Length = 377
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Query: 113 HTHPRASEVTICLKGALLVGFVDTLGRLFTQQLRPGDSFVFPKGLIHFLYNMDSSKPALA 172
H H A E + G+ V VD GR F + GD + FP GL H + ++ L
Sbjct: 90 HWHKEA-EWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEEGAEFLL 148
Query: 173 L--SGLSSQNPGLQMTSMATFASKPPIPDEVLKKAFQITRQDVS 214
+ G S+N Q+T P EV+ F +T++++S
Sbjct: 149 VFDDGSFSENSVFQLTDWLAHT-----PKEVIAANFGVTKEEIS 187
>pdb|2UYB|A Chain A, S161a Mutant Of Bacillus Subtilis Oxalate Decarboxylase
Oxdc
Length = 385
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Query: 113 HTHPRASEVTICLKGALLVGFVDTLGRLFTQQLRPGDSFVFPKGLIHFLYNMDSSKPALA 172
H H A E + G+ V VD GR F + GD + FP GL H + ++ L
Sbjct: 95 HWHKEA-EWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEEGAEFLL 153
Query: 173 L--SGLSSQNPGLQMTSMATFASKPPIPDEVLKKAFQITRQDVS 214
+ G ++N Q+T P EV+ F +T++++S
Sbjct: 154 VFDDGSFAENSTFQLTDWLAHT-----PKEVIAANFGVTKEEIS 192
>pdb|2UY9|A Chain A, E162a Mutant Of Bacillus Subtilis Oxalate Decarboxylase
Oxdc
Length = 385
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Query: 113 HTHPRASEVTICLKGALLVGFVDTLGRLFTQQLRPGDSFVFPKGLIHFLYNMDSSKPALA 172
H H A E + G+ V VD GR F + GD + FP GL H + ++ L
Sbjct: 95 HWHKEA-EWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEEGAEFLL 153
Query: 173 L--SGLSSQNPGLQMTSMATFASKPPIPDEVLKKAFQITRQDVS 214
+ G S N Q+T P EV+ F +T++++S
Sbjct: 154 VFDDGSFSANSTFQLTDWLAHT-----PKEVIAANFGVTKEEIS 192
>pdb|2UYA|A Chain A, Del162-163 Mutant Of Bacillus Subtilis Oxalate
Decarboxylase Oxdc
Length = 383
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Query: 113 HTHPRASEVTICLKGALLVGFVDTLGRLFTQQLRPGDSFVFPKGLIHFLYNMDSSKPALA 172
H H A E + G+ V VD GR F + GD + FP GL H + ++ L
Sbjct: 95 HWHKEA-EWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEEGAEFLL 153
Query: 173 LSGLSSQNPGLQMTSMATFASKPPIPDEVLKKAFQITRQDVS 214
+ S + Q+T P EV+ F +T++++S
Sbjct: 154 VFDDGSFSSTFQLTDWLAHT-----PKEVIAANFGVTKEEIS 190
>pdb|2V09|A Chain A, Sens161-164dssn Mutant Of Bacillus Subtilis Oxalate
Decarboxylase Oxdc
Length = 385
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 113 HTHPRASEVTICLKGALLVGFVDTLGRLFTQQLRPGDSFVFPKGLIHFLYNMDSSKPALA 172
H H A E + G+ V VD GR F + GD + FP GL H + ++ L
Sbjct: 95 HWHKEA-EWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEEGAEFLL 153
Query: 173 L--SGLSSQNPGLQMTSMATFASKPPIPDEVLKKAFQITRQDVS 214
+ G + Q+T P EV+ F +T++++S
Sbjct: 154 VFDDGSFDSSNTFQLTDWLAHT-----PKEVIAANFGVTKEEIS 192
>pdb|3QAC|A Chain A, Structure Of Amaranth 11s Proglobulin Seed Storage Protein
From Amaranthus Hypochondriacus L
Length = 465
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 82 TLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVTICLKGALLVGFVDTLGR-L 140
T N+ NLP + + L+ A+ + N ++ PH + A + C++G + V+ G+ +
Sbjct: 308 TTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSV 367
Query: 141 FTQQLRPGDSFVFPKGLIHFLYNMDSSKPALALSGLSSQNPGLQMTSMATFASKPPIPDE 200
F ++L G V P+ + ++ +S+N Q + T A + +P +
Sbjct: 368 FDEELSRGQLVVVPQNFAIVKQAFEDGFEWVSFK--TSENAMFQSLAGRTSAIR-SLPID 424
Query: 201 VLKKAFQITRQD 212
V+ +QI+R++
Sbjct: 425 VVSNIYQISREE 436
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 143 QQLRPGDSFVFPKGLIHFLYNMDSSKPALALSGLSSQNPGLQM 185
+ LR GD F P G+ H+ YN + +P +A+ + + N Q+
Sbjct: 132 RHLREGDIFAMPAGVSHWAYN-NGDQPLVAVILIDTANHANQL 173
>pdb|2VQA|A Chain A, Protein-Folding Location Can Regulate Mn Versus Cu- Or Zn-
Binding. Crystal Structure Of Mnca.
pdb|2VQA|B Chain B, Protein-Folding Location Can Regulate Mn Versus Cu- Or Zn-
Binding. Crystal Structure Of Mnca.
pdb|2VQA|C Chain C, Protein-Folding Location Can Regulate Mn Versus Cu- Or Zn-
Binding. Crystal Structure Of Mnca
Length = 361
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 9/128 (7%)
Query: 83 LTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVTICLKGALLVGFVDTLGRLFT 142
L + K PG + +T A I + + H HP A E L G + + + G+
Sbjct: 222 LASAKEFPG--SFNMTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVFASEGKASV 279
Query: 143 QQLRPGDSFVFPKGLIHFLYNMDSSKPALALSGLSSQNPG-LQMTSMATFASKPPIPDEV 201
+L+ GD PKG H + N S KP L + N G Q ++T+ + P V
Sbjct: 280 SRLQQGDVGYVPKGYGHAIRN-SSQKP---LDIVVVFNDGDYQSIDLSTWLASN--PSSV 333
Query: 202 LKKAFQIT 209
L FQI+
Sbjct: 334 LGNTFQIS 341
>pdb|1OD5|A Chain A, Crystal Structure Of Glycinin A3b4 Subunit Homohexamer
pdb|1OD5|B Chain B, Crystal Structure Of Glycinin A3b4 Subunit Homohexamer
Length = 492
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 7/134 (5%)
Query: 85 NTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVTICLKGALLVGFVDTLGR-LFTQ 143
N+ LP + GL+ + + NGI PH + A+ V +G V V+ G +F
Sbjct: 354 NSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNCQGNAVFDG 413
Query: 144 QLRPGDSFVFPKGLIHFLYNMDSSKPALALSGLSSQNPGLQMTSMATFASKPPIPDEVLK 203
+LR G V P+ +F+ + L + + + F + IP EVL
Sbjct: 414 ELRRGQLLVVPQ---NFVVAEQGGEQGLEYVVFKTHHNAVSSYIKDVFRA---IPSEVLS 467
Query: 204 KAFQITRQDVSIIR 217
++ + + V ++
Sbjct: 468 NSYNLGQSQVRQLK 481
>pdb|2D5F|A Chain A, Crystal Structure Of Recombinant Soybean Proglycinin A3b4
Subunit, Its Comparison With Mature Glycinin A3b4
Subunit, Responsible For Hexamer Assembly
pdb|2D5F|B Chain B, Crystal Structure Of Recombinant Soybean Proglycinin A3b4
Subunit, Its Comparison With Mature Glycinin A3b4
Subunit, Responsible For Hexamer Assembly
pdb|2D5H|A Chain A, Crystal Structure Of Recombinant Soybean Proglycinin A3b4
Subunit, Its Comparison With Mature Glycinin A3b4
Subunit, Responsible For Hexamer Assembly
pdb|2D5H|B Chain B, Crystal Structure Of Recombinant Soybean Proglycinin A3b4
Subunit, Its Comparison With Mature Glycinin A3b4
Subunit, Responsible For Hexamer Assembly
pdb|2D5H|C Chain C, Crystal Structure Of Recombinant Soybean Proglycinin A3b4
Subunit, Its Comparison With Mature Glycinin A3b4
Subunit, Responsible For Hexamer Assembly
pdb|2D5H|D Chain D, Crystal Structure Of Recombinant Soybean Proglycinin A3b4
Subunit, Its Comparison With Mature Glycinin A3b4
Subunit, Responsible For Hexamer Assembly
pdb|2D5H|E Chain E, Crystal Structure Of Recombinant Soybean Proglycinin A3b4
Subunit, Its Comparison With Mature Glycinin A3b4
Subunit, Responsible For Hexamer Assembly
pdb|2D5H|F Chain F, Crystal Structure Of Recombinant Soybean Proglycinin A3b4
Subunit, Its Comparison With Mature Glycinin A3b4
Subunit, Responsible For Hexamer Assembly
Length = 493
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 7/134 (5%)
Query: 85 NTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVTICLKGALLVGFVDTLGR-LFTQ 143
N+ LP + GL+ + + NGI PH + A+ V +G V V+ G +F
Sbjct: 355 NSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNXQGNAVFDG 414
Query: 144 QLRPGDSFVFPKGLIHFLYNMDSSKPALALSGLSSQNPGLQMTSMATFASKPPIPDEVLK 203
+LR G V P+ +F+ + L + + + F + IP EVL
Sbjct: 415 ELRRGQLLVVPQ---NFVVAEQGGEQGLEYVVFKTHHNAVSSYIKDVFRA---IPSEVLS 468
Query: 204 KAFQITRQDVSIIR 217
++ + + V ++
Sbjct: 469 NSYNLGQSQVRQLK 482
>pdb|3C3V|A Chain A, Crystal Structure Of Peanut Major Allergen Ara H 3
Length = 510
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 63/150 (42%), Gaps = 30/150 (20%)
Query: 84 TNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVTICLKGALLVGFVDTLG-RLFT 142
N NL + +GL+ ++ N + PH + A + L+G V VD+ G R++
Sbjct: 359 ANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYD 418
Query: 143 QQLRPGDSFVFPKGLIHFLYNMDSSKPALALSGLSSQNPGLQMTSMATFASKPPI----- 197
++L+ G V P+ A++G SQ+ + + T S+P I
Sbjct: 419 EELQEGHVLVVPQN--------------FAVAG-KSQSDNFEYVAFKT-DSRPSIANLAG 462
Query: 198 --------PDEVLKKAFQITRQDVSIIRKN 219
P+EV+ ++ + R+ ++ N
Sbjct: 463 ENSVIDNLPEEVVANSYGLPREQARQLKNN 492
>pdb|3HT1|A Chain A, 1.2a Structure Of The Polyketide Cyclase Remf From
Streptomyces Resistomycificus
Length = 145
Score = 33.9 bits (76), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 97 LTMARIDIAANGIVPPHTHPRASEVTICLKGALLVGFVDTLGRLFTQQLRPGDSFVFPKG 156
+ +++ NG PPH H E+ + L+G++ + D GR T+++ PG++ P+G
Sbjct: 39 FVLTEFEVSPNGSTPPHFHEWEHEIYV-LEGSMGLVLPDQ-GR--TEEVGPGEAIFIPRG 94
Query: 157 LIH 159
H
Sbjct: 95 EPH 97
>pdb|2EVX|A Chain A, Crystal Structure Of Pumpkin Seed Globulin
pdb|2E9Q|A Chain A, Recombinant Pro-11s Globulin Of Pumpkin
Length = 459
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 78 GFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVTICLKGALLVGFVDTL 137
G + N LP + + L+ R + +N +V PH + V +G V VD
Sbjct: 303 GGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNF 362
Query: 138 GR-LFTQQLRPGDSFVFPKGLI 158
G+ +F ++R G + P+ +
Sbjct: 363 GQSVFDGEVREGQVLMIPQNFV 384
>pdb|1FXZ|A Chain A, Crystal Structure Of Soybean Proglycinin A1ab1b Homotrimer
pdb|1FXZ|B Chain B, Crystal Structure Of Soybean Proglycinin A1ab1b Homotrimer
pdb|1FXZ|C Chain C, Crystal Structure Of Soybean Proglycinin A1ab1b Homotrimer
Length = 476
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/133 (19%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Query: 88 NLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVTICLKGALLVGFVDTLG-RLFTQQLR 146
+ P ++ + L+ + N + PH + A+ + L G L+ V+ G R+F +L+
Sbjct: 329 DFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQ 388
Query: 147 PGDSFVFPKGLIHFLYNMDSSKPALALSGLSSQNPGLQMTSMATFASKPPIPDEVLKKAF 206
G + P+ +F+ S + + + T + +P+EV++ F
Sbjct: 389 EGRVLIVPQ---NFVVAARSQSDNFEYVSFKTNDTPMIGTLAGANSLLNALPEEVIQHTF 445
Query: 207 QITRQDVSIIRKN 219
+ Q I+ N
Sbjct: 446 NLKSQQARQIKNN 458
>pdb|1UCX|A Chain A, Crystal Structure Of Proglycinin C12g Mutant
pdb|1UCX|B Chain B, Crystal Structure Of Proglycinin C12g Mutant
pdb|1UCX|C Chain C, Crystal Structure Of Proglycinin C12g Mutant
Length = 476
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/133 (19%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Query: 88 NLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVTICLKGALLVGFVDTLG-RLFTQQLR 146
+ P ++ + L+ + N + PH + A+ + L G L+ V+ G R+F +L+
Sbjct: 329 DFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQ 388
Query: 147 PGDSFVFPKGLIHFLYNMDSSKPALALSGLSSQNPGLQMTSMATFASKPPIPDEVLKKAF 206
G + P+ +F+ S + + + T + +P+EV++ F
Sbjct: 389 EGRVLIVPQ---NFVVAARSQSDNFEYVSFKTNDTPMIGTLAGANSLLNALPEEVIQHTF 445
Query: 207 QITRQDVSIIRKN 219
+ Q I+ N
Sbjct: 446 NLKSQQARQIKNN 458
>pdb|1UD1|A Chain A, Crystal Structure Of Proglycinin Mutant C88s
pdb|1UD1|B Chain B, Crystal Structure Of Proglycinin Mutant C88s
pdb|1UD1|C Chain C, Crystal Structure Of Proglycinin Mutant C88s
Length = 476
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/133 (19%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Query: 88 NLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVTICLKGALLVGFVDTLG-RLFTQQLR 146
+ P ++ + L+ + N + PH + A+ + L G L+ V+ G R+F +L+
Sbjct: 329 DFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQ 388
Query: 147 PGDSFVFPKGLIHFLYNMDSSKPALALSGLSSQNPGLQMTSMATFASKPPIPDEVLKKAF 206
G + P+ +F+ S + + + T + +P+EV++ F
Sbjct: 389 EGRVLIVPQ---NFVVAARSQSDNFEYVSFKTNDTPMIGTLAGANSLLNALPEEVIQHTF 445
Query: 207 QITRQDVSIIRKN 219
+ Q I+ N
Sbjct: 446 NLKSQQARQIKNN 458
>pdb|3HT2|A Chain A, Zink Containing Polyketide Cyclase Remf From Streptomyces
Resistomycificus
pdb|3HT2|C Chain C, Zink Containing Polyketide Cyclase Remf From Streptomyces
Resistomycificus
Length = 145
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 97 LTMARIDIAANGIVPPHTHPRASEVTICLKGALLVGFVDTLGRLFTQQLRPGDSFVFPKG 156
+ +++ NG PPH H E+ + L+G+ + D GR T+++ PG++ P+G
Sbjct: 39 FVLTEFEVSPNGSTPPHFHEWEHEIYV-LEGSXGLVLPDQ-GR--TEEVGPGEAIFIPRG 94
Query: 157 LIH 159
H
Sbjct: 95 EPH 97
>pdb|3D82|A Chain A, Crystal Structure Of A Cupin-2 Domain Containing Protein
(Sfri_3543) From Shewanella Frigidimarina Ncimb 400 At
2.05 A Resolution
pdb|3D82|B Chain B, Crystal Structure Of A Cupin-2 Domain Containing Protein
(Sfri_3543) From Shewanella Frigidimarina Ncimb 400 At
2.05 A Resolution
pdb|3D82|C Chain C, Crystal Structure Of A Cupin-2 Domain Containing Protein
(Sfri_3543) From Shewanella Frigidimarina Ncimb 400 At
2.05 A Resolution
pdb|3D82|D Chain D, Crystal Structure Of A Cupin-2 Domain Containing Protein
(Sfri_3543) From Shewanella Frigidimarina Ncimb 400 At
2.05 A Resolution
pdb|3D82|E Chain E, Crystal Structure Of A Cupin-2 Domain Containing Protein
(Sfri_3543) From Shewanella Frigidimarina Ncimb 400 At
2.05 A Resolution
Length = 102
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Query: 104 IAANGIVPPHTHPRASEVTICLKGALLVGFVDTLGRLFTQQLRPGDSFVFPKGLIH 159
+ G H H EV I +G L + F D L+ G+ +V PKG+ H
Sbjct: 36 VKVEGEFVWHEHADTDEVFIVXEGTLQIAFRDQ-----NITLQAGEXYVIPKGVEH 86
>pdb|4E2G|A Chain A, Crystal Structure Of Cupin Fold Protein Sthe2323 From
Sphaerobacter Thermophilus
pdb|4E2G|B Chain B, Crystal Structure Of Cupin Fold Protein Sthe2323 From
Sphaerobacter Thermophilus
pdb|4E2G|C Chain C, Crystal Structure Of Cupin Fold Protein Sthe2323 From
Sphaerobacter Thermophilus
pdb|4E2G|D Chain D, Crystal Structure Of Cupin Fold Protein Sthe2323 From
Sphaerobacter Thermophilus
pdb|4E2G|E Chain E, Crystal Structure Of Cupin Fold Protein Sthe2323 From
Sphaerobacter Thermophilus
pdb|4E2G|F Chain F, Crystal Structure Of Cupin Fold Protein Sthe2323 From
Sphaerobacter Thermophilus
pdb|4E2G|G Chain G, Crystal Structure Of Cupin Fold Protein Sthe2323 From
Sphaerobacter Thermophilus
pdb|4E2G|H Chain H, Crystal Structure Of Cupin Fold Protein Sthe2323 From
Sphaerobacter Thermophilus
Length = 126
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 89 LPG-----VNTMGLTMARIDIAANGIVPPHTHPRASEVTICLKGALLVGFVDTLGRLFTQ 143
LPG + L + + I N P H HP + + L+G L + T+G T+
Sbjct: 28 LPGFAXQAIQGKNLXLNWVRIEPNTEXPAHEHPH-EQAGVXLEGTLEL----TIGEE-TR 81
Query: 144 QLRPGDSFVFPKGLIH 159
LRPG ++ P G+ H
Sbjct: 82 VLRPGXAYTIPGGVRH 97
>pdb|3AZU|A Chain A, X-Ray Crystal Structure Of The Two Site-Specific Mutants
His35gln And His35leu Of Azurin From Pseudomonas
Aeruginosa
pdb|3AZU|B Chain B, X-Ray Crystal Structure Of The Two Site-Specific Mutants
His35gln And His35leu Of Azurin From Pseudomonas
Aeruginosa
pdb|3AZU|C Chain C, X-Ray Crystal Structure Of The Two Site-Specific Mutants
His35gln And His35leu Of Azurin From Pseudomonas
Aeruginosa
pdb|3AZU|D Chain D, X-Ray Crystal Structure Of The Two Site-Specific Mutants
His35gln And His35leu Of Azurin From Pseudomonas
Aeruginosa
Length = 128
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L++PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSQPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|2R9Z|A Chain A, Glutathione Amide Reductase From Chromatium Gracile
pdb|2R9Z|B Chain B, Glutathione Amide Reductase From Chromatium Gracile
pdb|2RAB|A Chain A, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
pdb|2RAB|B Chain B, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
Length = 463
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 78 GFNATLTNTKNLPGVNTMGLTMARIDIAANGIVP 111
GF++ + P +GL A I++ +NG+VP
Sbjct: 252 GFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVP 285
>pdb|2FT6|A Chain A, Structure Of Cu(Ii)azurin With The Metal-Binding Loop
Sequence "ctfpghsalm" Replaced With "ctphpm"
pdb|2FT7|A Chain A, Structure Of Cu(I)azurin At Ph 6, With The Metal-Binding
Loop Sequence "ctfpghsalm" Replaced With "ctphpm"
pdb|2FT8|A Chain A, Structure Of Cu(I)azurin, Ph8, With The Metal-Binding Loop
Sequence "ctfpghsalm" Replaced With "ctphpm"
Length = 124
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|3FS9|A Chain A, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caahaam)
pdb|3FSA|A Chain A, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caahaam); Chemically Reduced.
pdb|2XV0|A Chain A, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caahaam), Chemically Reduced, Ph4.8
pdb|2XV2|A Chain A, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caahaam), Chemically Reduced, Ph4.2
Length = 125
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|3NP3|A Chain A, C112dM121E PSEUDOMONAS AERUGINOSA AZURIN
pdb|3NP4|A Chain A, C112dM121E PSEUDOMONAS AERUGINOSA AZURIN
pdb|3OQR|A Chain A, C112dM121E AZURIN, PH 10.0
Length = 128
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|3FQY|A Chain A, Azurin C112d
Length = 128
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|2GHZ|A Chain A, Crystal Structure Of Azurin Phe114pro Mutant
pdb|2GHZ|B Chain B, Crystal Structure Of Azurin Phe114pro Mutant
pdb|2GI0|A Chain A, Crystal Structure Of Cu(I) Phe114pro Azurin Mutant
pdb|2GI0|B Chain B, Crystal Structure Of Cu(I) Phe114pro Azurin Mutant
Length = 128
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|2HX7|A Chain A, Crystal Structure Of Cu(ii) Azurin With The Metal-binding
Loop Sequence "ctfpghsalm" Replaced With "csphqgagm"
pdb|2HX7|B Chain B, Crystal Structure Of Cu(ii) Azurin With The Metal-binding
Loop Sequence "ctfpghsalm" Replaced With "csphqgagm"
pdb|2HX8|A Chain A, Crystal Structure Of Cu(I) Azurin With The Metal-Binding
Loop Sequence "ctfpghsalm" Replaced With "csphqgagm", At
Ph5
pdb|2HX8|B Chain B, Crystal Structure Of Cu(I) Azurin With The Metal-Binding
Loop Sequence "ctfpghsalm" Replaced With "csphqgagm", At
Ph5
pdb|2HX9|A Chain A, Crystal Structure Of Cu(i) Azurin With The Metal-binding
Loop Sequence "ctfpghsalm" Replaced With "csphqgagm", At
Ph4
pdb|2HX9|B Chain B, Crystal Structure Of Cu(i) Azurin With The Metal-binding
Loop Sequence "ctfpghsalm" Replaced With "csphqgagm", At
Ph4
pdb|2HXA|A Chain A, Crystal Structure Of Cu(I) Azurin With The Metal-Binding
Loop Sequence "ctfpghsalm" Replaced With "csphqgagm", At
Ph3.5
pdb|2HXA|B Chain B, Crystal Structure Of Cu(I) Azurin With The Metal-Binding
Loop Sequence "ctfpghsalm" Replaced With "csphqgagm", At
Ph3.5
Length = 127
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|1AG0|A Chain A, Structure Of Cys 112 Asp Azurin From Pseudomonas
Aeruginosa
pdb|1AG0|B Chain B, Structure Of Cys 112 Asp Azurin From Pseudomonas
Aeruginosa
Length = 129
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 31 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 82
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 83 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 111
>pdb|3FQ1|A Chain A, Azurin C112dM121I
Length = 128
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|3IN0|A Chain A, Crystal Structure Of The F114pM121Q VARIANT OF PSEUDOMONAS
Aeruginosa Azurin In The Cu(Ii) State
pdb|3IN0|B Chain B, Crystal Structure Of The F114pM121Q VARIANT OF PSEUDOMONAS
Aeruginosa Azurin In The Cu(Ii) State
pdb|3IN0|C Chain C, Crystal Structure Of The F114pM121Q VARIANT OF PSEUDOMONAS
Aeruginosa Azurin In The Cu(Ii) State
pdb|3IN0|D Chain D, Crystal Structure Of The F114pM121Q VARIANT OF PSEUDOMONAS
Aeruginosa Azurin In The Cu(Ii) State
Length = 128
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|1AZN|A Chain A, Crystal Structure Of The Azurin Mutant Phe114ala From
Pseudomonas Aeruginosa At 2.6 Angstroms Resolution
pdb|1AZN|B Chain B, Crystal Structure Of The Azurin Mutant Phe114ala From
Pseudomonas Aeruginosa At 2.6 Angstroms Resolution
pdb|1AZN|C Chain C, Crystal Structure Of The Azurin Mutant Phe114ala From
Pseudomonas Aeruginosa At 2.6 Angstroms Resolution
pdb|1AZN|D Chain D, Crystal Structure Of The Azurin Mutant Phe114ala From
Pseudomonas Aeruginosa At 2.6 Angstroms Resolution
Length = 128
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|1EZL|A Chain A, Crystal Structure Of The Disulphide Bond-Deficient Azurin
Mutant C3aC26A: HOW IMPORTANT IS THE S-S Bond For
Folding And Stability?
pdb|1EZL|B Chain B, Crystal Structure Of The Disulphide Bond-Deficient Azurin
Mutant C3aC26A: HOW IMPORTANT IS THE S-S Bond For
Folding And Stability?
pdb|1EZL|C Chain C, Crystal Structure Of The Disulphide Bond-Deficient Azurin
Mutant C3aC26A: HOW IMPORTANT IS THE S-S Bond For
Folding And Stability?
pdb|1EZL|D Chain D, Crystal Structure Of The Disulphide Bond-Deficient Azurin
Mutant C3aC26A: HOW IMPORTANT IS THE S-S Bond For
Folding And Stability?
Length = 128
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|3FPY|A Chain A, Azurin C112dM121L
Length = 128
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|3FSZ|A Chain A, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caaaahaaaam)
pdb|3FSZ|B Chain B, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caaaahaaaam)
pdb|3FT0|A Chain A, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caaaahaaaam), Chemically Reduced
pdb|3FT0|B Chain B, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caaaahaaaam), Chemically Reduced
pdb|2XV3|A Chain A, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caaaahaaaam), Chemically Reduced, Ph5.3
pdb|2XV3|B Chain B, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caaaahaaaam), Chemically Reduced, Ph5.3
Length = 129
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|3FSW|A Chain A, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caaaahaaam)
pdb|3FSW|B Chain B, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caaaahaaam)
pdb|3FSW|C Chain C, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caaaahaaam)
pdb|3FSW|D Chain D, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caaaahaaam)
Length = 128
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|3FSV|A Chain A, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caaahaaam)
Length = 127
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|1X8M|A Chain A, X-Ray Structure Of Pectin Degrading Enzyme 5-Keto 4-
Deoxyuronate Isomerase From Escherichia Coli
pdb|1X8M|B Chain B, X-Ray Structure Of Pectin Degrading Enzyme 5-Keto 4-
Deoxyuronate Isomerase From Escherichia Coli
pdb|1X8M|C Chain C, X-Ray Structure Of Pectin Degrading Enzyme 5-Keto 4-
Deoxyuronate Isomerase From Escherichia Coli
pdb|1X8M|D Chain D, X-Ray Structure Of Pectin Degrading Enzyme 5-Keto 4-
Deoxyuronate Isomerase From Escherichia Coli
pdb|1X8M|E Chain E, X-Ray Structure Of Pectin Degrading Enzyme 5-Keto 4-
Deoxyuronate Isomerase From Escherichia Coli
pdb|1X8M|F Chain F, X-Ray Structure Of Pectin Degrading Enzyme 5-Keto 4-
Deoxyuronate Isomerase From Escherichia Coli
Length = 288
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 32 FCIADTASPSSFYNNGVPCLNPNSAVSSHFVTSALAKPGKTSGNIFGFNATLTNTKNLPG 91
F DT +P+ FY N C ++ + VT P T G+ N N +P
Sbjct: 117 FASIDTGTPAKFYYN---CAPAHTTYPTKKVTPDEVSP-VTLGDNLTSNRRTINKYFVPD 172
Query: 92 V-NTMGLTMARIDIAANGI---VPPHTHPRASEV 121
V T L+M ++A + +P HTH R EV
Sbjct: 173 VLETCQLSMGLTELAPGNLWNTMPCHTHERRMEV 206
>pdb|2FTA|A Chain A, Structure Of Cu(ii)azurin With The Metal-binding Loop
Sequence "ctfpghsalm" Replaced With "ctphpfm"
pdb|2FTA|B Chain B, Structure Of Cu(ii)azurin With The Metal-binding Loop
Sequence "ctfpghsalm" Replaced With "ctphpfm"
pdb|2FTA|C Chain C, Structure Of Cu(ii)azurin With The Metal-binding Loop
Sequence "ctfpghsalm" Replaced With "ctphpfm"
pdb|2FTA|D Chain D, Structure Of Cu(ii)azurin With The Metal-binding Loop
Sequence "ctfpghsalm" Replaced With "ctphpfm"
Length = 125
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|1VLX|A Chain A, Structure Of Electron Transfer (cobalt-protein)
pdb|1VLX|B Chain B, Structure Of Electron Transfer (cobalt-protein)
pdb|1VLX|C Chain C, Structure Of Electron Transfer (cobalt-protein)
pdb|1VLX|D Chain D, Structure Of Electron Transfer (cobalt-protein)
pdb|1BEX|A Chain A, Structure Of Ruthenium-modified Pseudomonas Aeruginosa
Azurin
pdb|1BEX|B Chain B, Structure Of Ruthenium-modified Pseudomonas Aeruginosa
Azurin
pdb|1E5Y|A Chain A, Azurin From Pseudomonas Aeruginosa, Reduced Form, Ph 5.5
pdb|1E5Y|B Chain B, Azurin From Pseudomonas Aeruginosa, Reduced Form, Ph 5.5
pdb|1E5Y|C Chain C, Azurin From Pseudomonas Aeruginosa, Reduced Form, Ph 5.5
pdb|1E5Y|D Chain D, Azurin From Pseudomonas Aeruginosa, Reduced Form, Ph 5.5
pdb|1E5Z|A Chain A, Azurin From Pseudomonas Aeruginosa, Reduced Form, Ph 9.0
pdb|1E5Z|B Chain B, Azurin From Pseudomonas Aeruginosa, Reduced Form, Ph 9.0
pdb|1E5Z|C Chain C, Azurin From Pseudomonas Aeruginosa, Reduced Form, Ph 9.0
pdb|1E5Z|D Chain D, Azurin From Pseudomonas Aeruginosa, Reduced Form, Ph 9.0
pdb|1E65|A Chain A, Azurin From Pseudomonas Aeruginosa, Apo Form
pdb|1E65|B Chain B, Azurin From Pseudomonas Aeruginosa, Apo Form
pdb|1E65|C Chain C, Azurin From Pseudomonas Aeruginosa, Apo Form
pdb|1E65|D Chain D, Azurin From Pseudomonas Aeruginosa, Apo Form
pdb|1E67|A Chain A, Zn-Azurin From Pseudomonas Aeruginosa
pdb|1E67|B Chain B, Zn-Azurin From Pseudomonas Aeruginosa
pdb|1E67|C Chain C, Zn-Azurin From Pseudomonas Aeruginosa
pdb|1E67|D Chain D, Zn-Azurin From Pseudomonas Aeruginosa
pdb|1JZJ|A Chain A, Pseudomonas Aeruginosa Azurin Os(Bpy)2(Im)(His83)
pdb|1JZJ|B Chain B, Pseudomonas Aeruginosa Azurin Os(Bpy)2(Im)(His83)
pdb|1JZE|A Chain A, Pseudomonas Aeruginosa Azurin Ru(Bpy)2(Im)(His83)
pdb|1JZF|A Chain A, Pseudomonas Aeruginosa Oxidized Azurin(Cu2+) Ru(Tpy)(Phen)
(His83)
pdb|1JZG|A Chain A, Pseudomonas Aeruginosa Reduced Azurin (Cu1+) Ru(Tpy)(Phen)
(His83)
pdb|1JZH|A Chain A, Pseudomonas Aeruginosa Azurin Ru(tpy)(bpy)(his83)
pdb|1JZI|A Chain A, Pseudomonas Aeruginosa Azurin Re(Phen)(Co)3(His83)
pdb|1JZI|B Chain B, Pseudomonas Aeruginosa Azurin Re(Phen)(Co)3(His83)
pdb|1AZU|A Chain A, Structural Features Of Azurin At 2.7 Angstroms Resolution
pdb|4AZU|A Chain A, Crystal Structure Analysis Of Oxidized Pseudomonas
Aeruginosa Azurin At Ph 5.5 And Ph 9.0. A Ph-Induced
Conformational Transition Involves A Peptide Bond Flip
pdb|4AZU|B Chain B, Crystal Structure Analysis Of Oxidized Pseudomonas
Aeruginosa Azurin At Ph 5.5 And Ph 9.0. A Ph-Induced
Conformational Transition Involves A Peptide Bond Flip
pdb|4AZU|C Chain C, Crystal Structure Analysis Of Oxidized Pseudomonas
Aeruginosa Azurin At Ph 5.5 And Ph 9.0. A Ph-Induced
Conformational Transition Involves A Peptide Bond Flip
pdb|4AZU|D Chain D, Crystal Structure Analysis Of Oxidized Pseudomonas
Aeruginosa Azurin At Ph 5.5 And Ph 9.0. A Ph-Induced
Conformational Transition Involves A Peptide Bond Flip
pdb|5AZU|A Chain A, Crystal Structure Analysis Of Oxidized Pseudomonas
Aeruginosa Azurin At Ph 5.5 And Ph 9.0. A Ph-Induced
Conformational Transition Involves A Peptide Bond Flip
pdb|5AZU|B Chain B, Crystal Structure Analysis Of Oxidized Pseudomonas
Aeruginosa Azurin At Ph 5.5 And Ph 9.0. A Ph-Induced
Conformational Transition Involves A Peptide Bond Flip
pdb|5AZU|C Chain C, Crystal Structure Analysis Of Oxidized Pseudomonas
Aeruginosa Azurin At Ph 5.5 And Ph 9.0. A Ph-Induced
Conformational Transition Involves A Peptide Bond Flip
pdb|5AZU|D Chain D, Crystal Structure Analysis Of Oxidized Pseudomonas
Aeruginosa Azurin At Ph 5.5 And Ph 9.0. A Ph-Induced
Conformational Transition Involves A Peptide Bond Flip
pdb|3UGE|A Chain A, Silver Metallated Pseudomonas Aeruginosa Azurin At 1.70 A
pdb|3UGE|B Chain B, Silver Metallated Pseudomonas Aeruginosa Azurin At 1.70 A
pdb|3UGE|C Chain C, Silver Metallated Pseudomonas Aeruginosa Azurin At 1.70 A
pdb|3UGE|D Chain D, Silver Metallated Pseudomonas Aeruginosa Azurin At 1.70 A
pdb|4HZ1|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Azurin With
Iron(Ii) At The Copper-Binding Site.
pdb|4HZ1|B Chain B, Crystal Structure Of Pseudomonas Aeruginosa Azurin With
Iron(Ii) At The Copper-Binding Site.
pdb|4HZ1|C Chain C, Crystal Structure Of Pseudomonas Aeruginosa Azurin With
Iron(Ii) At The Copper-Binding Site.
pdb|4HZ1|D Chain D, Crystal Structure Of Pseudomonas Aeruginosa Azurin With
Iron(Ii) At The Copper-Binding Site
Length = 128
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|1ILS|A Chain A, X-Ray Crystal Structure The Two Site-Specific Mutants
Ile7ser And Phe110ser Of Azurin From Pseudomonas
Aeruginosa
pdb|1ILS|B Chain B, X-Ray Crystal Structure The Two Site-Specific Mutants
Ile7ser And Phe110ser Of Azurin From Pseudomonas
Aeruginosa
pdb|1ILS|C Chain C, X-Ray Crystal Structure The Two Site-Specific Mutants
Ile7ser And Phe110ser Of Azurin From Pseudomonas
Aeruginosa
pdb|1ILS|D Chain D, X-Ray Crystal Structure The Two Site-Specific Mutants
Ile7ser And Phe110ser Of Azurin From Pseudomonas
Aeruginosa
Length = 128
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|1ETJ|A Chain A, Azurin Mutant With Met 121 Replaced By Glu
pdb|1ETJ|B Chain B, Azurin Mutant With Met 121 Replaced By Glu
pdb|1ETJ|C Chain C, Azurin Mutant With Met 121 Replaced By Glu
pdb|1ETJ|D Chain D, Azurin Mutant With Met 121 Replaced By Glu
Length = 128
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|3IBO|A Chain A, Pseudomonas Aeruginosa E2qH83QT126H-Azurin Re(Phen)(Co)3
pdb|3IBO|B Chain B, Pseudomonas Aeruginosa E2qH83QT126H-Azurin Re(Phen)(Co)3
pdb|3IBO|C Chain C, Pseudomonas Aeruginosa E2qH83QT126H-Azurin Re(Phen)(Co)3
pdb|3IBO|D Chain D, Pseudomonas Aeruginosa E2qH83QT126H-Azurin Re(Phen)(Co)3
Length = 128
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AQTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|2I7S|A Chain A, Crystal Structure Of Re(Phen)(Co)3 (Thr124his)(His83gln)
Azurin Cu(Ii) From Pseudomonas Aeruginosa
pdb|2I7S|B Chain B, Crystal Structure Of Re(Phen)(Co)3 (Thr124his)(His83gln)
Azurin Cu(Ii) From Pseudomonas Aeruginosa
pdb|2I7S|C Chain C, Crystal Structure Of Re(Phen)(Co)3 (Thr124his)(His83gln)
Azurin Cu(Ii) From Pseudomonas Aeruginosa
pdb|2I7S|D Chain D, Crystal Structure Of Re(Phen)(Co)3 (Thr124his)(His83gln)
Azurin Cu(Ii) From Pseudomonas Aeruginosa
Length = 128
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AQTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|2TSA|A Chain A, Azurin Mutant M121a
pdb|2TSA|B Chain B, Azurin Mutant M121a
pdb|2TSA|C Chain C, Azurin Mutant M121a
pdb|2TSA|D Chain D, Azurin Mutant M121a
pdb|2TSB|A Chain A, Azurin Mutant M121a-Azide
pdb|2TSB|B Chain B, Azurin Mutant M121a-Azide
pdb|2TSB|C Chain C, Azurin Mutant M121a-Azide
pdb|2TSB|D Chain D, Azurin Mutant M121a-Azide
Length = 128
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|3FQ2|A Chain A, Azurin C112dM121F
Length = 128
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|2I7O|A Chain A, Structure Of Re(4,7-Dimethyl-Phen)(Thr124his)(Lys122trp)
(His83gln)azcu(Ii), A Rhenium Modified Azurin Mutant
Length = 128
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AQTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|1CC3|A Chain A, Purple Cua Center
pdb|1CC3|B Chain B, Purple Cua Center
Length = 130
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|1XB6|A Chain A, The K24r Mutant Of Pseudomonas Aeruginosa Azurin
pdb|1XB6|B Chain B, The K24r Mutant Of Pseudomonas Aeruginosa Azurin
Length = 128
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|1XB8|A Chain A, Zn Substituted Form Of D62cK74C DOUBLE MUTANT OF
PSEUDOMONAS Aeruginosa Azurin
pdb|1XB8|C Chain C, Zn Substituted Form Of D62cK74C DOUBLE MUTANT OF
PSEUDOMONAS Aeruginosa Azurin
Length = 128
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTCGM--------ASGLDKDYLCPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|1NZR|A Chain A, Crystal Structure Of The Azurin Mutant Nickel-Trp48met
From Pseudomonas Aeruginosa At 2.2 Angstroms Resolution
pdb|1NZR|B Chain B, Crystal Structure Of The Azurin Mutant Nickel-Trp48met
From Pseudomonas Aeruginosa At 2.2 Angstroms Resolution
pdb|1NZR|C Chain C, Crystal Structure Of The Azurin Mutant Nickel-Trp48met
From Pseudomonas Aeruginosa At 2.2 Angstroms Resolution
pdb|1NZR|D Chain D, Crystal Structure Of The Azurin Mutant Nickel-Trp48met
From Pseudomonas Aeruginosa At 2.2 Angstroms Resolution
Length = 128
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNMVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|2IWE|A Chain A, Structure Of A Cavity Mutant (H117g) Of Pseudomonas
Aeruginosa Azurin
pdb|2IWE|D Chain D, Structure Of A Cavity Mutant (H117g) Of Pseudomonas
Aeruginosa Azurin
pdb|2IWE|G Chain G, Structure Of A Cavity Mutant (H117g) Of Pseudomonas
Aeruginosa Azurin
pdb|2IWE|J Chain J, Structure Of A Cavity Mutant (H117g) Of Pseudomonas
Aeruginosa Azurin
pdb|3N2J|A Chain A, Azurin H117g, Oxidized Form
pdb|3N2J|B Chain B, Azurin H117g, Oxidized Form
pdb|3N2J|C Chain C, Azurin H117g, Oxidized Form
pdb|3N2J|D Chain D, Azurin H117g, Oxidized Form
pdb|3N2J|E Chain E, Azurin H117g, Oxidized Form
pdb|3N2J|F Chain F, Azurin H117g, Oxidized Form
pdb|3N2J|G Chain G, Azurin H117g, Oxidized Form
pdb|3N2J|H Chain H, Azurin H117g, Oxidized Form
pdb|3N2J|I Chain I, Azurin H117g, Oxidized Form
pdb|3N2J|J Chain J, Azurin H117g, Oxidized Form
pdb|3N2J|K Chain K, Azurin H117g, Oxidized Form
pdb|3N2J|L Chain L, Azurin H117g, Oxidized Form
Length = 128
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 63 TSALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVT 122
T L+ PG N+ G N L+ ++ GV T G+ A+G+ + P S V
Sbjct: 30 TVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGM--------ASGLDKDYLKPDDSRVI 81
Query: 123 ICLKGALLVGFVDTLGRLF-TQQLRPGDSFVF 153
K L+G + F +L+ G+ ++F
Sbjct: 82 AHTK---LIGSGEKDSVTFDVSKLKEGEQYMF 110
>pdb|3KSC|A Chain A, Crystal Structure Of Pea Prolegumin, An 11s Seed Globulin
From Pisum Sativum L.
pdb|3KSC|B Chain B, Crystal Structure Of Pea Prolegumin, An 11s Seed Globulin
From Pisum Sativum L.
pdb|3KSC|C Chain C, Crystal Structure Of Pea Prolegumin, An 11s Seed Globulin
From Pisum Sativum L.
pdb|3KSC|D Chain D, Crystal Structure Of Pea Prolegumin, An 11s Seed Globulin
From Pisum Sativum L.
pdb|3KSC|E Chain E, Crystal Structure Of Pea Prolegumin, An 11s Seed Globulin
From Pisum Sativum L.
pdb|3KSC|F Chain F, Crystal Structure Of Pea Prolegumin, An 11s Seed Globulin
From Pisum Sativum L
Length = 496
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 144 QLRPGDSFVFPKGLIHFLYNMDSSKPALALS 174
+ R GD P G++ ++YN D P +A+S
Sbjct: 113 RFREGDIIAVPTGIVFWMYN-DQDTPVIAVS 142
>pdb|1VHO|A Chain A, Crystal Structure Of A Putative PeptidaseENDOGLUCANASE
Length = 346
Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 158 IHFLYNMDSSKPAL-ALSGLSSQNPGLQMTSMATFASKPPIPDEV 201
++ ++++ L AL+G NP + TFAS+PP D +
Sbjct: 196 VYVVFSVQEETGCLGALTGAYEINPDAAIVXDVTFASEPPFSDHI 240
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,840,009
Number of Sequences: 62578
Number of extensions: 211014
Number of successful extensions: 568
Number of sequences better than 100.0: 64
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 529
Number of HSP's gapped (non-prelim): 76
length of query: 222
length of database: 14,973,337
effective HSP length: 95
effective length of query: 127
effective length of database: 9,028,427
effective search space: 1146610229
effective search space used: 1146610229
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.5 bits)