Query 027543
Match_columns 222
No_of_seqs 181 out of 1732
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 19:28:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027543.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027543hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3e7a_A PP-1A, serine/threonine 100.0 5.1E-57 1.7E-61 386.8 22.1 221 1-222 6-235 (299)
2 3ll8_A Serine/threonine-protei 100.0 2.2E-56 7.4E-61 389.7 21.8 220 2-222 29-256 (357)
3 3h63_A Serine/threonine-protei 100.0 1.4E-55 4.8E-60 380.3 21.8 219 3-222 16-240 (315)
4 2ie4_C PP2A-alpha;, serine/thr 100.0 1.4E-55 4.9E-60 380.6 20.1 221 2-222 9-229 (309)
5 3icf_A PPT, serine/threonine-p 100.0 1.8E-55 6.1E-60 382.3 20.5 220 2-222 16-244 (335)
6 1fjm_A Protein serine/threonin 100.0 5.8E-54 2E-58 373.1 22.2 221 1-222 7-236 (330)
7 1aui_A Calcineurin, serine/thr 100.0 1.2E-53 4.1E-58 385.8 22.2 220 2-222 42-269 (521)
8 1wao_1 Serine/threonine protei 100.0 6.2E-48 2.1E-52 350.7 21.9 220 2-222 168-393 (477)
9 2z72_A Protein-tyrosine-phosph 100.0 7.5E-33 2.6E-37 242.2 5.8 184 32-221 60-273 (342)
10 2dfj_A Diadenosinetetraphospha 100.0 1E-32 3.5E-37 235.3 5.8 168 43-217 1-179 (280)
11 2qjc_A Diadenosine tetraphosph 100.0 1.9E-29 6.4E-34 213.1 7.0 184 30-221 6-210 (262)
12 1g5b_A Serine/threonine protei 99.9 1.4E-24 4.8E-29 178.2 5.7 161 41-219 11-190 (221)
13 1nnw_A Hypothetical protein; s 99.7 4.9E-17 1.7E-21 135.0 8.8 119 43-163 2-141 (252)
14 3rqz_A Metallophosphoesterase; 99.7 1.9E-17 6.5E-22 137.7 6.3 116 42-165 3-122 (246)
15 3qfm_A SAPH, putative uncharac 99.7 2.7E-17 9.3E-22 139.1 7.0 117 43-164 12-140 (270)
16 1su1_A Hypothetical protein YF 99.2 6.3E-12 2.1E-16 102.0 4.6 69 43-115 26-102 (208)
17 1s3l_A Hypothetical protein MJ 99.2 5.4E-11 1.8E-15 95.2 8.2 65 43-116 26-90 (190)
18 2kkn_A Uncharacterized protein 99.1 2.1E-11 7.1E-16 96.7 2.2 62 43-114 23-86 (178)
19 1uf3_A Hypothetical protein TT 99.1 1E-10 3.5E-15 94.4 6.0 73 42-115 5-77 (228)
20 2a22_A Vacuolar protein sortin 98.9 2.3E-09 7.8E-14 87.2 7.7 94 42-164 25-124 (215)
21 2yvt_A Hypothetical protein AQ 98.9 5E-10 1.7E-14 92.5 2.9 74 42-116 5-104 (260)
22 1z2w_A Vacuolar protein sortin 98.9 3.6E-09 1.2E-13 84.3 7.4 64 43-115 11-77 (192)
23 3ck2_A Conserved uncharacteriz 98.8 1.2E-09 4E-14 85.9 3.5 58 43-114 7-64 (176)
24 1xm7_A Hypothetical protein AQ 98.8 5.6E-09 1.9E-13 83.3 4.8 70 42-115 1-85 (195)
25 3ib7_A ICC protein; metallopho 98.6 4.6E-08 1.6E-12 83.2 5.0 73 42-114 25-113 (330)
26 3d03_A Phosphohydrolase; glyce 98.5 1.2E-07 4E-12 78.4 6.8 69 43-115 1-85 (274)
27 2q8u_A Exonuclease, putative; 98.5 6.4E-08 2.2E-12 83.4 5.2 76 38-115 13-110 (336)
28 3rl5_A Metallophosphoesterase 98.5 8.3E-08 2.8E-12 81.8 5.4 88 18-115 24-124 (296)
29 3av0_A DNA double-strand break 98.4 2.8E-07 9.5E-12 81.1 6.6 73 42-115 20-109 (386)
30 2nxf_A Putative dimetal phosph 98.4 1.2E-07 3.9E-12 79.9 2.9 73 42-114 5-100 (322)
31 1ii7_A MRE11 nuclease; RAD50, 98.4 3.5E-07 1.2E-11 78.8 5.7 71 43-114 1-88 (333)
32 2xmo_A LMO2642 protein; phosph 98.2 1.3E-06 4.3E-11 77.8 5.3 73 42-115 39-139 (443)
33 3tho_B Exonuclease, putative; 98.1 1.4E-06 4.7E-11 76.6 4.1 70 43-114 1-91 (379)
34 3t1i_A Double-strand break rep 97.9 9.2E-06 3.1E-10 72.6 4.5 54 42-95 32-97 (431)
35 4fbk_A DNA repair and telomere 97.8 1.6E-05 5.5E-10 71.6 5.6 52 42-93 76-139 (472)
36 4fbw_A DNA repair protein RAD3 97.8 1.8E-05 6E-10 70.5 5.7 51 42-92 13-75 (417)
37 2qfp_A Purple acid phosphatase 97.6 3.7E-05 1.3E-09 68.1 4.1 70 42-114 119-197 (424)
38 1ute_A Protein (II purple acid 97.6 1.8E-05 6.1E-10 66.1 1.4 73 42-114 6-95 (313)
39 1xzw_A Purple acid phosphatase 97.3 0.00014 4.9E-09 64.3 4.6 71 42-115 126-205 (426)
40 3tgh_A Glideosome-associated p 96.6 0.00069 2.4E-08 58.6 1.8 72 43-114 4-86 (342)
41 1hp1_A 5'-nucleotidase; metall 96.4 0.0014 5E-08 59.4 3.2 67 42-113 8-94 (516)
42 3qfk_A Uncharacterized protein 96.3 0.0019 6.6E-08 58.8 3.2 67 42-113 19-112 (527)
43 2z1a_A 5'-nucleotidase; metal- 96.0 0.004 1.4E-07 57.1 3.6 68 42-114 29-119 (552)
44 4h2g_A 5'-nucleotidase; dimer, 95.7 0.0042 1.4E-07 56.9 2.7 67 42-113 25-117 (546)
45 1t71_A Phosphatase, conserved 95.5 0.0063 2.1E-07 51.2 2.6 69 41-114 3-75 (281)
46 3ztv_A NAD nucleotidase, NADN; 95.5 0.0091 3.1E-07 55.1 3.8 67 42-113 12-105 (579)
47 3ive_A Nucleotidase; structura 95.4 0.0033 1.1E-07 57.1 0.8 66 43-113 7-96 (509)
48 2z06_A Putative uncharacterize 94.5 0.037 1.3E-06 45.7 4.7 65 43-113 1-68 (252)
49 3gve_A YFKN protein; alpha-bet 94.3 0.013 4.5E-07 50.5 1.5 67 42-113 11-111 (341)
50 1t70_A Phosphatase; crystal, X 94.2 0.056 1.9E-06 44.7 5.0 66 43-114 1-69 (255)
51 3c9f_A 5'-nucleotidase; 2',3'- 94.0 0.015 5E-07 53.5 1.3 68 42-114 15-107 (557)
52 3jyf_A 2',3'-cyclic nucleotide 93.8 0.016 5.4E-07 50.0 1.1 43 42-84 8-67 (339)
53 4h1s_A 5'-nucleotidase; hydrol 91.9 0.099 3.4E-06 47.4 3.5 65 44-113 5-95 (530)
54 2yeq_A Apased, PHOD, alkaline 89.2 0.5 1.7E-05 42.9 5.6 35 43-81 117-154 (527)
55 2wdc_A SOXB, sulfur oxidation 83.2 0.47 1.6E-05 43.4 2.1 55 53-113 102-166 (562)
56 3flo_A DNA polymerase alpha su 63.5 20 0.00067 31.9 7.3 61 54-114 164-247 (460)
57 1zav_U 50S ribosomal protein L 57.5 5.4 0.00018 21.5 1.6 27 1-27 1-27 (30)
58 1dd4_C 50S ribosomal protein L 53.7 5.2 0.00018 23.1 1.2 27 1-27 1-27 (40)
59 3e0j_A DNA polymerase subunit 32.7 33 0.0011 30.6 3.6 73 41-115 199-310 (476)
60 2cyc_A Tyrosyl-tRNA synthetase 30.7 39 0.0013 29.0 3.7 69 2-79 2-75 (375)
61 1n3l_A Tyrosyl-tRNA synthetase 29.2 47 0.0016 28.4 3.9 67 2-78 6-75 (372)
62 2dlc_X Tyrosyl-tRNA synthetase 27.5 56 0.0019 28.2 4.1 55 15-78 23-79 (394)
63 2z06_A Putative uncharacterize 25.9 40 0.0014 27.4 2.7 35 72-109 2-36 (252)
64 1h3o_A Transcription initiatio 24.9 31 0.001 22.7 1.5 37 19-55 38-74 (75)
65 4h8e_A Undecaprenyl pyrophosph 23.9 36 0.0012 27.8 2.0 77 16-96 84-165 (256)
66 2yle_A Protein spire homolog 1 23.8 79 0.0027 25.3 4.0 32 2-35 34-65 (229)
67 1t71_A Phosphatase, conserved 23.4 21 0.0007 29.6 0.5 38 71-109 5-42 (281)
68 2j5b_A Tyrosyl-tRNA synthetase 23.2 33 0.0011 29.2 1.8 58 14-80 24-83 (348)
69 2lnb_A Z-DNA-binding protein 1 23.0 1.2E+02 0.0041 20.0 4.1 45 6-50 24-76 (80)
70 2o97_B NS1, HU-1, DNA-binding 22.7 1.4E+02 0.0047 19.6 4.6 33 1-33 1-33 (90)
71 1qxn_A SUD, sulfide dehydrogen 22.6 1.3E+02 0.0046 21.1 4.9 99 4-113 12-119 (137)
72 1mul_A NS2, HU-2, DNA binding 22.6 1.2E+02 0.0041 19.9 4.3 33 1-33 1-33 (90)
73 3ugs_B Undecaprenyl pyrophosph 22.4 44 0.0015 26.7 2.2 76 17-96 67-147 (225)
74 4h62_V Mediator of RNA polymer 20.7 1E+02 0.0035 15.9 3.2 24 14-37 7-30 (31)
75 2jtq_A Phage shock protein E; 20.4 1.2E+02 0.0041 19.1 3.8 53 49-107 20-72 (85)
No 1
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=100.00 E-value=5.1e-57 Score=386.80 Aligned_cols=221 Identities=45% Similarity=0.975 Sum_probs=212.2
Q ss_pred CCHHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCccccCCCcceeccCcCCHHHHHHHHHhcCCCCCCc
Q 027543 1 MDLDQWIAKVKEGQ--------HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETN 72 (222)
Q Consensus 1 ~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~ 72 (222)
+++|++|+++.+.. .++++++.+||++|+++|++||+++++++|++|||||||++++|.++|+..+.++.++
T Consensus 6 ~~~d~~i~~l~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~ll~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~~ 85 (299)
T 3e7a_A 6 LNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESN 85 (299)
T ss_dssp CCHHHHHHHHHTTTTSCTTCCCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSSC
T ss_pred cCHHHHHHHHHhccccCCCcccCCCHHHHHHHHHHHHHHHHhCCCeeecCCCEEEEecCCCCHHHHHHHHHHhCCCCCcc
Confidence 47999999997544 6999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecccccCCCCcHHHHHHHHHhhhhCCCeEEEeCCCCchhhhhhhhcchHHHHHHhCChhHHHHHHHHhcccceEEEE
Q 027543 73 YIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAII 152 (222)
Q Consensus 73 ~vflGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i 152 (222)
+||||||||||++|.||+.++++++..+|.++++||||||.+.++..++|..++..+| +..+|+.+.++|++||+++++
T Consensus 86 ~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~i~~~ygF~~e~~~ky-~~~l~~~~~~~f~~LPlaaii 164 (299)
T 3e7a_A 86 YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIV 164 (299)
T ss_dssp EEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHS-CHHHHHHHHHHHTTCCCEEEE
T ss_pred EEeCCcccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCchhhhhcccccchHHHHHHh-hHHHHHHHHHHHhhCCceEEE
Confidence 9999999999999999999999999999999999999999999999999999999999 578999999999999999999
Q ss_pred cCcEEEEecCCCCCCCCHHHHhhhhcccCCCCCCcccccccCCCC-CCCCCccCCCCCceecCHHHHHhcC
Q 027543 153 DGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPE-DIETWAVSPRGAGWLFGSRVTSEVM 222 (222)
Q Consensus 153 ~~~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWs~p~-~~~~~~~~~~g~~~~fG~~~~~~f~ 222 (222)
+++++|||||++|+..++++++.+.|+.++|.++.++|+|||||. ...+|.+|+||.+++||++++++||
T Consensus 165 ~~~il~vHGGlsp~~~~l~~i~~i~R~~~~p~~~~~~dllWsDP~~~~~~~~~~~RG~~~~fG~~~~~~fl 235 (299)
T 3e7a_A 165 DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFL 235 (299)
T ss_dssp TTTEEEESSCCCTTCCCTHHHHTCCSSCCCCSSSHHHHHHHCEECTTCSSEEECTTSSSEEECHHHHHHHH
T ss_pred CCeEEEEcCccCcccCCHHHHHhccCCCcCCcchhhhhhhcCCccccccCcccCCCCcceeeCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999 5789999999999999999999996
No 2
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=100.00 E-value=2.2e-56 Score=389.73 Aligned_cols=220 Identities=43% Similarity=0.791 Sum_probs=210.8
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCcceeccCcCCHHHHHHHHHhcCCCCCCcEEEeccccc
Q 027543 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVD 81 (222)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vd 81 (222)
+++.++++|++++.++++++.+||++|+++|++||+++++++|++|||||||++.+|.++|+..+.++.+++||||||||
T Consensus 29 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~ll~~~~pi~ViGDIHG~~~dL~~ll~~~g~~~~~~~vfLGD~VD 108 (357)
T 3ll8_A 29 RVDILKAHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVD 108 (357)
T ss_dssp CHHHHHHHHHTTCCBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSS
T ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhCCCeEEecccceeeccCCCCHHHHHHHHHhcCCCCCcEEEECCCccC
Confidence 68999999999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCeEEEeCCCCchhhhhhhhcchHHHHHHhCChhHHHHHHHHhcccceEEEEcCcEEEEec
Q 027543 82 RGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHG 161 (222)
Q Consensus 82 rG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHa 161 (222)
||++|.||+.++++++..+|+++++||||||.+.++..++|..++..+| ...+|+.+.++|++||++++++++++||||
T Consensus 109 RG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygF~~E~~~ky-~~~l~~~~~~~f~~LPlaaii~~~il~vHG 187 (357)
T 3ll8_A 109 RGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMDAFDCLPLAALMNQQFLCVHG 187 (357)
T ss_dssp SSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHSSHHHHHHHHS-CHHHHHHHHHHHHTSCSEEEETTTEEECSS
T ss_pred CCcChHHHHHHHHHhhhhcCCcEEEEeCchhhhhhhcccCchhhhhhcc-chhHHHHHHHHHHhCCcceEEcccEEEEec
Confidence 9999999999999999999999999999999999999999999999999 578999999999999999999999999999
Q ss_pred CCCCCCCCHHHHhhhhcccCCCCCCcccccccCCCCCCC-------CCc-cCCCCCceecCHHHHHhcC
Q 027543 162 GLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIE-------TWA-VSPRGAGWLFGSRVTSEVM 222 (222)
Q Consensus 162 Gi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWs~p~~~~-------~~~-~~~~g~~~~fG~~~~~~f~ 222 (222)
|++|+..++++|+.++|+.++|..+.++|+|||||.+.. +|. ++.||.|++||++++++||
T Consensus 188 Glsp~l~~ld~I~~i~R~~e~p~~g~~~DlLWSDP~~~~~~~~~~~~~~~~s~RG~g~~FG~~~~~~Fl 256 (357)
T 3ll8_A 188 GLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFL 256 (357)
T ss_dssp CCCTTCCSHHHHHTCCCSSCCCSSSHHHHHHHCEECTTTTSCSCCCSEEECTTTTSSEEECHHHHHHHH
T ss_pred CcCcccCCHHHHhhccccccCCccCchhHhhccCccccccccccccccccCCCCCCceEEChHHHHHHH
Confidence 999999999999999999999999999999999999543 454 5689999999999999996
No 3
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=100.00 E-value=1.4e-55 Score=380.33 Aligned_cols=219 Identities=42% Similarity=0.728 Sum_probs=209.2
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCC----cceeccCcCCHHHHHHHHHhcCCCCCC-cEEEec
Q 027543 3 LDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSP----VTVCGDIHGQFHDLMKLFQTGGHVPET-NYIFMG 77 (222)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~----i~viGDiHG~~~~l~~ll~~~~~~~~~-~~vflG 77 (222)
+++++++|++++.|+++++.+||.+|+++|++||++++++.+ ++||||||||+.+|.++|+..+.++.+ ++||+|
T Consensus 16 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~l~~l~~p~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflG 95 (315)
T 3h63_A 16 MKELMQWYKDQKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNG 95 (315)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHTSCSEEEECCCTTCEEEEECCCTTCHHHHHHHHHHHCCCBTTBCEEEES
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEEEecCCCceEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeC
Confidence 678999999999999999999999999999999999988755 999999999999999999999988765 599999
Q ss_pred ccccCCCCcHHHHHHHHHhhhhCCCeEEEeCCCCchhhhhhhhcchHHHHHHhCChhHHHHHHHHhcccceEEEEcCcEE
Q 027543 78 DFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 157 (222)
Q Consensus 78 D~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l 157 (222)
||||||++|.||+.+|++++..+|.++++||||||.+.++..++|..++..+| ....|+.+.++|++||++++++++++
T Consensus 96 D~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~ygf~~e~~~k~-~~~l~~~~~~~f~~LPla~ii~~~il 174 (315)
T 3h63_A 96 DFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKY-TAQMYELFSEVFEWLPLAQCINGKVL 174 (315)
T ss_dssp CCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHS-CHHHHHHHHHHHTTSCSEEEETTTEE
T ss_pred CccCCCcChHHHHHHHHHhhhhcCCcEEEEecCcccccccccccccHHHHHHh-hhHHHHHHHHHHhcCCcEEEEcCCEE
Confidence 99999999999999999999999999999999999999999999999999999 47889999999999999999999999
Q ss_pred EEecCC-CCCCCCHHHHhhhhcccCCCCCCcccccccCCCCCCCCCccCCCCCceecCHHHHHhcC
Q 027543 158 CVHGGL-SPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEVM 222 (222)
Q Consensus 158 ~vHaGi-~~~~~~~~~i~~i~r~~~~~~~~~~~dllWs~p~~~~~~~~~~~g~~~~fG~~~~~~f~ 222 (222)
|||||+ +|...++++++.++|+.++|.++.++|+|||||....+|.+++||.|+.||++++++||
T Consensus 175 ~vHGGl~sp~~~~l~~i~~i~R~~~~p~~g~~~dllWsDP~~~~g~~~s~RG~g~~fg~~~~~~fl 240 (315)
T 3h63_A 175 IMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFL 240 (315)
T ss_dssp ECSSCCCSSTTCCHHHHHHCCCSSCCCSSSHHHHHHHCEECSSSSEEECTTSSSEEECHHHHHHHH
T ss_pred EeCCCCCCcccCCHHHHHhCcccccccccchhhhheecCCCCCCCcCcCCCCceEEECHHHHHHHH
Confidence 999999 78888999999999999999999999999999999899999999999999999999996
No 4
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=100.00 E-value=1.4e-55 Score=380.61 Aligned_cols=221 Identities=62% Similarity=1.191 Sum_probs=214.2
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCcceeccCcCCHHHHHHHHHhcCCCCCCcEEEeccccc
Q 027543 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVD 81 (222)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vd 81 (222)
+++++++++++++.++++++.+||++|+++|++||+++++.+|++||||||||+++|.++|+..+..+.+.+||+|||||
T Consensus 9 ~~~~~i~~~~~~~~l~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~VD 88 (309)
T 2ie4_C 9 ELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVD 88 (309)
T ss_dssp HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHSCTTEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTSCEEECSCCSS
T ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCEEeccCCEEEEecCCCCHHHHHHHHHHcCCCCCCEEEEeCCccC
Confidence 57899999999999999999999999999999999999999999999999999999999999999988899999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCeEEEeCCCCchhhhhhhhcchHHHHHHhCChhHHHHHHHHhcccceEEEEcCcEEEEec
Q 027543 82 RGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHG 161 (222)
Q Consensus 82 rG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHa 161 (222)
||++|.||+.+|++++..+|.++++||||||.+.++..++|..++..+||...+|+.+.++|++||++++++++++||||
T Consensus 89 RG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~yg~~~l~~~~~~~~~~LPl~~~i~~~il~vHg 168 (309)
T 2ie4_C 89 RGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHG 168 (309)
T ss_dssp SSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSTTGGGTSSHHHHHHHHSSSTHHHHHHHHHTTSSCSCEEETTTEEECSS
T ss_pred CCCChHHHHHHHHHHHhhCCCcEEEEeCCCCHHHHhhhhhhhHHHHhhcccHHHHHHHHHHHHhCCceEEEcCcEEEECC
Confidence 99999999999999999999999999999999999999999999999999888999999999999999988999999999
Q ss_pred CCCCCCCCHHHHhhhhcccCCCCCCcccccccCCCCCCCCCccCCCCCceecCHHHHHhcC
Q 027543 162 GLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEVM 222 (222)
Q Consensus 162 Gi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWs~p~~~~~~~~~~~g~~~~fG~~~~~~f~ 222 (222)
|++|.+..+++++.+.|+.+.|..+.++|+|||||+...+|.+++||.++.||++++++||
T Consensus 169 Gl~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~s~RG~g~~fG~~~~~~fl 229 (309)
T 2ie4_C 169 GLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFN 229 (309)
T ss_dssp CCCTTCCSHHHHHTSCCSSCCCSSSHHHHHHHCEECSSSSEEECTTSSSEEECHHHHHHHH
T ss_pred CCCCcccCHHHHHhhcccccCChhHHHHHHhhCCCccccccccCCCCcccccCHHHHHHHH
Confidence 9999999999999999999999999999999999999899999999999999999999996
No 5
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-55 Score=382.28 Aligned_cols=220 Identities=34% Similarity=0.639 Sum_probs=209.1
Q ss_pred CHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCC------cceeccCcCCHHHHHHHHHhcCCCCC-CcE
Q 027543 2 DLDQWI-AKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSP------VTVCGDIHGQFHDLMKLFQTGGHVPE-TNY 73 (222)
Q Consensus 2 ~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~------i~viGDiHG~~~~l~~ll~~~~~~~~-~~~ 73 (222)
.+++++ ++|++++.|+++++.+||++|+++|++||+++++..| ++||||||||+++|.++|+.++.++. +++
T Consensus 16 ~~~~~i~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~~~~l~~p~~~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~ 95 (335)
T 3icf_A 16 FISKMVNDLFLKGKYLPKKYVAAIISHADTLFRQEPSMVELENNSTPDVKISVCGDTHGQFYDVLNLFRKFGKVGPKHTY 95 (335)
T ss_dssp HHHHHHHHTGGGTCCCCHHHHHHHHHHHHHHHHTSCSEEEECCSSSTTCEEEEECCCTTCHHHHHHHHHHHCCCBTTEEE
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEEecCCcccCceEEEEecCCCCHHHHHHHHHHcCCCCCCcEE
Confidence 378999 9999999999999999999999999999999999888 99999999999999999999998765 569
Q ss_pred EEecccccCCCCcHHHHHHHHHhhhhCCCeEEEeCCCCchhhhhhhhcchHHHHHHhCChhHHHHHHHHhcccceEEEEc
Q 027543 74 IFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIID 153 (222)
Q Consensus 74 vflGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~ 153 (222)
||||||||||++|.||+.+|++++..+|.++++||||||.+.++..++|..++..+| ...+|+.+.++|++||++++++
T Consensus 96 vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygf~~e~~~k~-~~~l~~~~~~~f~~LPlaaii~ 174 (335)
T 3icf_A 96 LFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYGFEDECKYKY-SQRIFNMFAQSFESLPLATLIN 174 (335)
T ss_dssp EECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHSHHHHHHHHS-CHHHHHHHHHHHTTSCSEEEET
T ss_pred EEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchhhhhhhhccccchHhHhhc-cHHHHHHHHHHHhhcceeEEEc
Confidence 999999999999999999999999999999999999999999999999999999999 5789999999999999999999
Q ss_pred CcEEEEecCC-CCCCCCHHHHhhhhcccCCCCCCcccccccCCCCCCCCCccCCCCCceecCHHHHHhcC
Q 027543 154 GTVLCVHGGL-SPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEVM 222 (222)
Q Consensus 154 ~~~l~vHaGi-~~~~~~~~~i~~i~r~~~~~~~~~~~dllWs~p~~~~~~~~~~~g~~~~fG~~~~~~f~ 222 (222)
++++|||||+ +|...++++++.+.|+.++|.++.++|+|||||....+|.+|+||.|++||++++++||
T Consensus 175 ~~il~vHGGl~sp~~~~ld~i~~i~R~~~~p~~g~~~dlLWSDP~~~~g~~~s~RG~g~~FG~~~~~~fl 244 (335)
T 3icf_A 175 NDYLVMHGGLPSDPSATLSDFKNIDRFAQPPRDGAFMELLWADPQEANGMGPSQRGLGHAFGPDITDRFL 244 (335)
T ss_dssp TTEEECSSCCCSCTTCCHHHHHTCCCSSCCCSSSHHHHHHHCEECSSSSEEECCCC--EEECHHHHHHHH
T ss_pred CcEEEecCCcCCCccCCHHHHHhCccccccccccchhhhhccCCCCcCCcccCCCCCceeeCHHHHHHHH
Confidence 9999999999 78889999999999999999999999999999998899999999999999999999996
No 6
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=100.00 E-value=5.8e-54 Score=373.07 Aligned_cols=221 Identities=44% Similarity=0.957 Sum_probs=209.8
Q ss_pred CCHHHHHHHHhcC--------CCCCHHHHHHHHHHHHHHHhhCCCccccCCCcceeccCcCCHHHHHHHHHhcCCCCCCc
Q 027543 1 MDLDQWIAKVKEG--------QHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETN 72 (222)
Q Consensus 1 ~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~ 72 (222)
+++|++|+++.+. ..++++++.+||++|+++|++||+++++.+|++||||||||+++|.++|+.++.++.++
T Consensus 7 ~~~d~~i~~l~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~e~~l~~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~~ 86 (330)
T 1fjm_A 7 LNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESN 86 (330)
T ss_dssp CCHHHHHHHHHHTTTTCTTCCCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSSC
T ss_pred ccHHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEeecCceEEecCCCCCHHHHHHHHHHhCCCCcce
Confidence 3789999999863 57999999999999999999999999999999999999999999999999999998999
Q ss_pred EEEecccccCCCCcHHHHHHHHHhhhhCCCeEEEeCCCCchhhhhhhhcchHHHHHHhCChhHHHHHHHHhcccceEEEE
Q 027543 73 YIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAII 152 (222)
Q Consensus 73 ~vflGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i 152 (222)
+||+|||||||++|.||+++|++++..+|.++++||||||.+.++..++|..++..+|+ ..+|+.+.+||++||+++++
T Consensus 87 ~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~y~-~~l~~~~~~~f~~LPl~~~i 165 (330)
T 1fjm_A 87 YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN-IKLWKTFTDCFNCLPIAAIV 165 (330)
T ss_dssp EEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC-HHHHHHHHHHHTTCCCEEEE
T ss_pred EEeCCCcCCCCCChHHHHHHHHHhhhhcCCceEEecCCchHhhhhhhhhhhhhhhhhcc-HHHHHHHHHHHHhCCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999994 57899999999999999999
Q ss_pred cCcEEEEecCCCCCCCCHHHHhhhhcccCCCCCCcccccccCCCCC-CCCCccCCCCCceecCHHHHHhcC
Q 027543 153 DGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPED-IETWAVSPRGAGWLFGSRVTSEVM 222 (222)
Q Consensus 153 ~~~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWs~p~~-~~~~~~~~~g~~~~fG~~~~~~f~ 222 (222)
+++++|||||++|.+.+++|++.+.|+.+.|..+.++|++||||.. ..+|..+.||.+++||++++++||
T Consensus 166 ~~~i~~vHgGl~p~~~~l~qi~~i~r~~e~~~~g~~~dlLWsdp~~~~~~w~~~~rG~~~~fG~~~~~~fl 236 (330)
T 1fjm_A 166 DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFL 236 (330)
T ss_dssp TTTEEEESSCCCTTCSCHHHHHHCCSSCCCCSSSHHHHHHHCEECTTCSSEEECTTSSSEEECHHHHHHHH
T ss_pred cCcEEEEccCCCcccCCHHHHhhhhcCccCcccchHHHHHhcCCccccCCcCcccCCCceeeChHHHHHHH
Confidence 9999999999999999999999999999999889999999999994 578999999999999999999996
No 7
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=100.00 E-value=1.2e-53 Score=385.76 Aligned_cols=220 Identities=44% Similarity=0.801 Sum_probs=209.6
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCcceeccCcCCHHHHHHHHHhcCCCCCCcEEEeccccc
Q 027543 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVD 81 (222)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vd 81 (222)
+++.++++|++++.++++++.+||++|+++|++||+++++.+|++||||||||+++|.++|+..+.++.+++||||||||
T Consensus 42 ~~d~l~~~~~~~~~l~~~~i~~L~~~a~~il~~Ep~ll~l~~pI~VIGDIHGq~~dL~~LL~~~g~p~~d~yVFLGDyVD 121 (521)
T 1aui_A 42 RVDILKAHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVD 121 (521)
T ss_dssp CHHHHHHHHHTTCCBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSS
T ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhCCCeEeeccceeeccCCCCCHHHHHHHHHhcCCCCcceEEEcCCcCC
Confidence 68999999999999999999999999999999999999999999999999999999999999888888899999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCeEEEeCCCCchhhhhhhhcchHHHHHHhCChhHHHHHHHHhcccceEEEEcCcEEEEec
Q 027543 82 RGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHG 161 (222)
Q Consensus 82 rG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHa 161 (222)
||++|.||+.+|++++..+|.++++||||||.+.++..++|..++..+|+ ..+|+.+.++|++||++++++++++||||
T Consensus 122 RGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~~l~~~ygF~~E~~~ky~-~~l~~~~~~~f~~LPlaaii~~~il~VHG 200 (521)
T 1aui_A 122 RGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS-ERVYDACMDAFDCLPLAALMNQQFLCVHG 200 (521)
T ss_dssp SSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHSSHHHHHHHHSC-HHHHHHHHHHHTTSCCEEEETTTEEEESS
T ss_pred CCCCHHHHHHHHHHHhhhCCCeEEEecCCccHHHHHHHhCccHHHHHhhh-hHHHHHHHHHHHhCCceEEecCCceEECC
Confidence 99999999999999999999999999999999999999999999999995 67899999999999999999999999999
Q ss_pred CCCCCCCCHHHHhhhhcccCCCCCCcccccccCCCCCC-------CCCccC-CCCCceecCHHHHHhcC
Q 027543 162 GLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDI-------ETWAVS-PRGAGWLFGSRVTSEVM 222 (222)
Q Consensus 162 Gi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWs~p~~~-------~~~~~~-~~g~~~~fG~~~~~~f~ 222 (222)
|++|.+.++++|+.+.|+.++|..+.++|+|||||... .+|..| .||.+++||++++++||
T Consensus 201 GlsP~~~sld~I~~I~R~~e~p~~g~~~DLLWSDP~~~~g~~~~~~~f~~ns~RG~g~~FG~d~v~~FL 269 (521)
T 1aui_A 201 GLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFL 269 (521)
T ss_dssp CCCTTCCSHHHHHHSCCSSSCCSSSHHHHHHHCEECTTTTSCSSCCCEEECTTTTSSEEECHHHHHHHH
T ss_pred CcCcccCCHHHhhhccCCcCCCccchhhhheecCccccccccccCcceecccCCCcccccCHHHHHHHH
Confidence 99999999999999999999999999999999999954 457665 79999999999999996
No 8
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=100.00 E-value=6.2e-48 Score=350.74 Aligned_cols=220 Identities=42% Similarity=0.712 Sum_probs=207.4
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCC----CcceeccCcCCHHHHHHHHHhcCCCCC-CcEEEe
Q 027543 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNS----PVTVCGDIHGQFHDLMKLFQTGGHVPE-TNYIFM 76 (222)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~----~i~viGDiHG~~~~l~~ll~~~~~~~~-~~~vfl 76 (222)
+++.+++.+++.+.++++++.+|++++.+++.++|++++++. +++|||||||++++|.++|+.++.++. +++||+
T Consensus 168 ~l~~lie~l~~~~~l~e~~v~~L~~~a~eil~~e~~~~~~~~~~~~~~~vigDiHG~~~~l~~~l~~~~~~~~~~~~v~l 247 (477)
T 1wao_1 168 FMKELMQWYKDQKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFN 247 (477)
T ss_dssp HHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHTSCSEEEECCCSSCEEEEECBCTTCHHHHHHHHHHHCCCBTTBCEEEE
T ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHccCCCeEEeecCCCcceEEEeCCCCCHHHHHHHHHHcCCCCCcCeEEEe
Confidence 367899999999999999999999999999999999988864 499999999999999999999998765 569999
Q ss_pred cccccCCCCcHHHHHHHHHhhhhCCCeEEEeCCCCchhhhhhhhcchHHHHHHhCChhHHHHHHHHhcccceEEEEcCcE
Q 027543 77 GDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTV 156 (222)
Q Consensus 77 GD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~ 156 (222)
|||||||++|.||+.+|++++..+|.++++||||||.+.++..++|..++..+|+ ..+|+.+.++|++||+++++++++
T Consensus 248 GD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~lp~~~~~~~~~ 326 (477)
T 1wao_1 248 GDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYT-AQMYELFSEVFEWLPLAQCINGKV 326 (477)
T ss_dssp SCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSC-TTHHHHHHHHHTTSCSEEEETTTE
T ss_pred ccccCCCcchHHHHHHHHHHHhhCCCceEeecCCccHHHHhhhcChHHHHHHHhh-HHHHHHHHHHhccCCcEEEEcCcE
Confidence 9999999999999999999999999999999999999999999999999999996 478999999999999999999999
Q ss_pred EEEecCC-CCCCCCHHHHhhhhcccCCCCCCcccccccCCCCCCCCCccCCCCCceecCHHHHHhcC
Q 027543 157 LCVHGGL-SPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEVM 222 (222)
Q Consensus 157 l~vHaGi-~~~~~~~~~i~~i~r~~~~~~~~~~~dllWs~p~~~~~~~~~~~g~~~~fG~~~~~~f~ 222 (222)
+|||||+ +|...++++++.+.|+.++|..+.++|++||||....+|.++.||.++.||++++++||
T Consensus 327 ~~vHgg~~~~~~~~l~~i~~~~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl 393 (477)
T 1wao_1 327 LIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFL 393 (477)
T ss_dssp EECSSCCCSSSCCCHHHHHTCCCSSCCCSSSHHHHHHHCEECSSSSCEECTTSSSEEECHHHHHHHH
T ss_pred EEECCCCCccccCCHHHHHhccCCCCCchhhhhhhhccCCCCccCCcCcCCCCCceeECHHHHHHHH
Confidence 9999999 67778999999999999999999999999999999889999999999999999999996
No 9
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=99.97 E-value=7.5e-33 Score=242.22 Aligned_cols=184 Identities=22% Similarity=0.278 Sum_probs=139.2
Q ss_pred HhhCCCccccCCCcceeccCcCCHHHHHHHHHhcCCC--------CCCcEEEecccccCCCCcHHHHHHHHHhhh---hC
Q 027543 32 LIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHV--------PETNYIFMGDFVDRGYNSLEVFTILLLLKA---RY 100 (222)
Q Consensus 32 ~~~e~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~--------~~~~~vflGD~vdrG~~s~evl~~l~~l~~---~~ 100 (222)
+++|+++++..+|++|||||||++++|.++|+.++.. +.+.+||+|||||||++|.+|++++++++. .+
T Consensus 60 ~~~~~~~~~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~ 139 (342)
T 2z72_A 60 KQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDA 139 (342)
T ss_dssp TSCCCSEECCCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCcceecCCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 7889999999999999999999999999999998764 357899999999999999999999999986 78
Q ss_pred CCeEEEeCCCCchhhhhhhhc----chHHHHHHhCC--hhHH---HHHHHHhcccceEEEEcCcEEEEecCCCCCCC---
Q 027543 101 PANITLLRGNHESRQLTQVYG----FYDECQRKYGN--ANAW---RYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIR--- 168 (222)
Q Consensus 101 p~~v~~lrGNHE~~~~~~~~~----~~~~~~~~~~~--~~~~---~~~~~~~~~lP~~~~i~~~~l~vHaGi~~~~~--- 168 (222)
|.++++|+||||.+.++.... .+......++. ..+| ....+||+.||+++.++ +++|||||++|...
T Consensus 140 ~~~v~~v~GNHE~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~L~~lP~~~~~~-~~~~vHgGl~p~~~~~~ 218 (342)
T 2z72_A 140 GGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRPYNKLYSADTEIGQWLRSKNTIIKIN-DVLYMHGGISSEWISRE 218 (342)
T ss_dssp TCEEEECCCHHHHHHHHTCCTTSCTTHHHHHHHTTSCGGGGGSTTBHHHHHHHTCCSEEEET-TEEEESSCCCHHHHHTT
T ss_pred CCeEEEEecCCcHHHhhCcccccccccchHHHHhcccHHHHHHHhHHHHHHHhhCCeEEEEC-CEEEEECCCChhhcccC
Confidence 999999999999998863211 11111112221 2333 35778999999999876 69999999998763
Q ss_pred -CHHHHhhhhcccC-----CCCCCcccccccCCCCCCCCCccCCCCC-ceecCHHHHHhc
Q 027543 169 -TIDQIRVIERNCE-----IPHEGPFCDLMWSDPEDIETWAVSPRGA-GWLFGSRVTSEV 221 (222)
Q Consensus 169 -~~~~i~~i~r~~~-----~~~~~~~~dllWs~p~~~~~~~~~~~g~-~~~fG~~~~~~f 221 (222)
++++++.+.|+.. .+..+.+.+++|++|.. .| .|+. +..||.+++++|
T Consensus 219 ~~l~~i~~~~r~~~~~~~~~~~~~~~~~~lwsd~~~--~w---~R~~~~~~fg~~~~~~f 273 (342)
T 2z72_A 219 LTLDKANALYRANVDASKKSLKADDLLNFLFFGNGP--TW---YRGYFSETFTEAELDTI 273 (342)
T ss_dssp CCHHHHHHHHHHHTTSCHHHHHHSHHHHHHHSTTST--TT---CCGGGSTTCCHHHHHHH
T ss_pred CCHHHHHHHhhhhccccccccccCHHHHhccCCCCC--CC---cCCcccccCChHHHHHH
Confidence 7788888887632 12234568999999753 24 2333 345666666555
No 10
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=99.97 E-value=1e-32 Score=235.26 Aligned_cols=168 Identities=23% Similarity=0.347 Sum_probs=134.9
Q ss_pred CCcceeccCcCCHHHHHHHHHhcCCC-CCCcEEEecccccCCCCcHHHHHHHHHhhhhCCCeEEEeCCCCchhhhhhhhc
Q 027543 43 SPVTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYG 121 (222)
Q Consensus 43 ~~i~viGDiHG~~~~l~~ll~~~~~~-~~~~~vflGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~ 121 (222)
|+++||||||||+++|.+++++++.. +.+.+||+|||||||++|.+|+++++++. .++++|+||||.+.++..++
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~~~l~~l~~l~----~~~~~v~GNHe~~~l~~~~g 76 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLG----DSVRLVLGNHDLHLLAVFAG 76 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHHHHHHHHHHTG----GGEEECCCHHHHHHHHHHTT
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccHHHHHHHHhCC----CceEEEECCCcHHHHhHhcC
Confidence 58999999999999999999999984 56899999999999999999999998874 46999999999999887666
Q ss_pred chHH----HHHHhCChhHHHHHHHHhcccceEEEEcC-cEEEEecCCCCCCCCHHHHhhhhcccC----CCCCCcccccc
Q 027543 122 FYDE----CQRKYGNANAWRYCTDVFDYLTLSAIIDG-TVLCVHGGLSPDIRTIDQIRVIERNCE----IPHEGPFCDLM 192 (222)
Q Consensus 122 ~~~~----~~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHaGi~~~~~~~~~i~~i~r~~~----~~~~~~~~dll 192 (222)
+... ...++-.........+|++.||+++.+++ +++|||||++|.+ .+++++.+.|+.+ .+....+.+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHaGi~p~~-~l~~~~~~~r~~e~~l~~~~~~~~~~~l 155 (280)
T 2dfj_A 77 ISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQW-DLQTAKECARDVEAVLSSDSYPFFLDAM 155 (280)
T ss_dssp SSCCCGGGCCHHHHTSTTHHHHHHHHHTSCSEEEETTTTEEEESSCCCTTC-CHHHHHHHHHHHHHHHHSTTHHHHHHHT
T ss_pred CcccchhhhHHHHhhhhHHHHHHHHHHhCCcEEEECCCeEEEEeCCCCcCc-CHHHHHHHHHHHHHhhcCCcHHHHHHHh
Confidence 5321 11111122345677899999999988787 8999999999998 5788887776653 34444578999
Q ss_pred cCCCCCCCCCccCCCCCc-eecCHHH
Q 027543 193 WSDPEDIETWAVSPRGAG-WLFGSRV 217 (222)
Q Consensus 193 Ws~p~~~~~~~~~~~g~~-~~fG~~~ 217 (222)
|++|. ..|.++.||.+ +.||.++
T Consensus 156 ~~d~~--~~w~~~~~G~~r~~~~~~~ 179 (280)
T 2dfj_A 156 YGDMP--NNWSPELRGLGRLRFITNA 179 (280)
T ss_dssp TCSCC--CSCCTTCCHHHHHHHHHHH
T ss_pred cCCCC--CCcCCCCCCceeEEEeccH
Confidence 99985 67888999887 6788777
No 11
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=99.95 E-value=1.9e-29 Score=213.08 Aligned_cols=184 Identities=21% Similarity=0.290 Sum_probs=130.3
Q ss_pred HHHhhCCCccccCCCcceeccCcCCHHHHHHHHHhcCCCCC-CcEEEecccccCCCCcHHHHHHHHHhhhhCCCeEEEeC
Q 027543 30 EILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPE-TNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLR 108 (222)
Q Consensus 30 ~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~-~~~vflGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lr 108 (222)
..+.+++++..+.+|+++||||||++++|.++++.++..+. +.+||+||++|||+++.++++++.++ .+++|+
T Consensus 6 ~~~~~~~~l~~~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~~~~~l~~l~~~------~~~~v~ 79 (262)
T 2qjc_A 6 QGYANVVTLPNVTGRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDSFGVVRLLKRL------GAYSVL 79 (262)
T ss_dssp --CCCEEECTTCCSCEEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSSSSSCHHHHHHHHHHH------TCEECC
T ss_pred cccCChhhhcCCCCeEEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCCCCCCHHHHHHHHHHC------CCEEEe
Confidence 35677888888889999999999999999999999987765 99999999999999999999998764 399999
Q ss_pred CCCchhhhhhhhcchHH-HHHHhCChh--------HHHHHHHHhcccceEEEEc-CcEEEEecCCCCCCCCHH----HHh
Q 027543 109 GNHESRQLTQVYGFYDE-CQRKYGNAN--------AWRYCTDVFDYLTLSAIID-GTVLCVHGGLSPDIRTID----QIR 174 (222)
Q Consensus 109 GNHE~~~~~~~~~~~~~-~~~~~~~~~--------~~~~~~~~~~~lP~~~~i~-~~~l~vHaGi~~~~~~~~----~i~ 174 (222)
||||.+.++...++..+ +...++... ......+|++.||+++.++ ++++|||||++|..+..+ .+.
T Consensus 80 GNHd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~i~~~~i~~vHgg~~p~~~~~~~~~~~l~ 159 (262)
T 2qjc_A 80 GNHDAKLLKLVKKLGKKECLKGRDAKSSLAPLAQSIPTDVETYLSQLPHIIRIPAHNVMVAHAGLHPQRPVDRQYEDEVT 159 (262)
T ss_dssp CHHHHHHHHHHHCC-------------CHHHHHHHCCHHHHHHHHTCCSEEEEGGGTEEEESSCCCTTSCGGGCCHHHHH
T ss_pred CcChHHHHhhhcCCCccccccccchHHHHHHHHhhhhHHHHHHHHcCCcEEEECCCcEEEEECCCCCCCCcccCCHHHHh
Confidence 99999988765555432 233443221 2356778999999998886 489999999998875322 221
Q ss_pred hhhccc---CCCCCCcccccccCCCC--CCCCCccCCCCCc-eecCHHHHHhc
Q 027543 175 VIERNC---EIPHEGPFCDLMWSDPE--DIETWAVSPRGAG-WLFGSRVTSEV 221 (222)
Q Consensus 175 ~i~r~~---~~~~~~~~~dllWs~p~--~~~~~~~~~~g~~-~~fG~~~~~~f 221 (222)
.+.... ..+..+. .++|++|. ....|..+.+|.. ++|||+++..|
T Consensus 160 ~ir~~~~~~~~~~~G~--~~~~~d~~~~~~~~w~~~~~g~~~vvfGHt~~~~~ 210 (262)
T 2qjc_A 160 TMRNLIEKEQEATGGV--TLTATEETNDGGKPWASMWRGPETVVFGHDARRGL 210 (262)
T ss_dssp HCCEEEEC-------C--CEEEESCSTTCCEEGGGGCCCSSEEEECCCGGGCC
T ss_pred hhhhcccccccCCCCc--cccccCCCCcCCCChhhccCCCCEEEECCCccccc
Confidence 111111 1111222 47899885 2456877777766 69999988654
No 12
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=99.90 E-value=1.4e-24 Score=178.22 Aligned_cols=161 Identities=21% Similarity=0.287 Sum_probs=113.4
Q ss_pred cCCCcceeccCcCCHHHHHHHHHhcCCC-CCCcEEEecccccCCCCcHHHHHHHHHhhhhCCCeEEEeCCCCchhhhhhh
Q 027543 41 VNSPVTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQV 119 (222)
Q Consensus 41 ~~~~i~viGDiHG~~~~l~~ll~~~~~~-~~~~~vflGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~ 119 (222)
..++++||||+||++++|.++++.++.. ..+.+|++||++|||+++.++++++.+ .++++|+||||.+.++..
T Consensus 11 ~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~~~~~~~~l~~------~~~~~v~GNhd~~~~~~~ 84 (221)
T 1g5b_A 11 KYRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECLELITF------PWFRAVRGNHEQMMIDGL 84 (221)
T ss_dssp GCSCEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHHHHHGGGGS------TTEEECCCHHHHHHHHHH
T ss_pred CCceEEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccCCCCChHHHHHHHhc------CCEEEEccCcHHHHHhhh
Confidence 3589999999999999999999998875 468899999999999999999987743 259999999999876543
Q ss_pred hcchH-HHHHHhCC----------hhHHHHHHHHhcccceEEEE---cCcEEEEecCCCCCCCCHHHHhhhhcccCCCCC
Q 027543 120 YGFYD-ECQRKYGN----------ANAWRYCTDVFDYLTLSAII---DGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHE 185 (222)
Q Consensus 120 ~~~~~-~~~~~~~~----------~~~~~~~~~~~~~lP~~~~i---~~~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~ 185 (222)
..... ......+. ..+.+...+|++.||.+..+ +++++|||||+++..... .++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~~~~~~~~i~~vHgg~~~~~~~~------~~~------ 152 (221)
T 1g5b_A 85 SERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYPFDEYEF------GKP------ 152 (221)
T ss_dssp STTCCCHHHHTTTGGGGGGSCHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSSBCCT------TCC------
T ss_pred ccCCcHHHHHHcCCCchhhcCHHHHHHHHHHHHHHHhCCcEEEEEecCCeEEEEecCCChhhccc------CCC------
Confidence 21110 00111111 22446788999999999876 458999999987653210 011
Q ss_pred CcccccccCCCCC---CCCCccCCCCCc-eecCHHHHH
Q 027543 186 GPFCDLMWSDPED---IETWAVSPRGAG-WLFGSRVTS 219 (222)
Q Consensus 186 ~~~~dllWs~p~~---~~~~~~~~~g~~-~~fG~~~~~ 219 (222)
....+++|+++.. ..+|..+.++.. ++|||+.+.
T Consensus 153 ~~~~~~lw~~~~~~~~~~~~~~~~~~~~~vv~GHth~~ 190 (221)
T 1g5b_A 153 VDHQQVIWNRERISNSQNGIVKEIKGADTFIFGHTPAV 190 (221)
T ss_dssp CCHHHHHHCCHHHHHHHTTCCCCCBTSSEEEECSSCCS
T ss_pred ccccccccCchhhhhhccccCCcccCCCEEEECCCCCc
Confidence 1135789998652 234444455554 789998654
No 13
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.69 E-value=4.9e-17 Score=135.00 Aligned_cols=119 Identities=17% Similarity=0.152 Sum_probs=87.3
Q ss_pred CCcceeccCcCCHHHHHHHHHhcC---CC--CCCcEEEecccccCCCCcHHHHHHHHHhhhhCCCeEEEeCCCCchhhhh
Q 027543 43 SPVTVCGDIHGQFHDLMKLFQTGG---HV--PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLT 117 (222)
Q Consensus 43 ~~i~viGDiHG~~~~l~~ll~~~~---~~--~~~~~vflGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~ 117 (222)
+++++|||+||++.+|.++++.+. .. +.+.+|++||++|+|+++.++++++.++.... .+++|+||||.+...
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~~~~~~l~~l~~~~--~~~~v~GNhD~~~~~ 79 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKKE--NVKIIRGKYDQIIAM 79 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHHHHHHHHHHHHHHS--CEEEECCHHHHHHHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHHHHHHHHHhhHhhc--CeeEEecchHHHhhc
Confidence 689999999999999999998876 44 56899999999999999999999999887543 499999999987654
Q ss_pred hhhc-----------chH--HHHHHhCChhHHHHHHHHhcccceEEEE--cC-cEEEEecCC
Q 027543 118 QVYG-----------FYD--ECQRKYGNANAWRYCTDVFDYLTLSAII--DG-TVLCVHGGL 163 (222)
Q Consensus 118 ~~~~-----------~~~--~~~~~~~~~~~~~~~~~~~~~lP~~~~i--~~-~~l~vHaGi 163 (222)
.... +.. .....+....+.....+|++.+|..... ++ +++++||++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p 141 (252)
T 1nnw_A 80 SDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSP 141 (252)
T ss_dssp SCTTCSSSGGGGGSSCCHHHHHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCS
T ss_pred cccccCCcccccchhhhHHHHHHHHHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCC
Confidence 2111 000 0001111122334566889999976654 33 799999998
No 14
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.69 E-value=1.9e-17 Score=137.73 Aligned_cols=116 Identities=17% Similarity=0.210 Sum_probs=88.2
Q ss_pred CCCcceeccCcCCHHHHHHHHHhcCCCCCCcEEEecccccCCCCcHHHHHHHHHhhhhCCCeEEEeCCCCchhhhhhhhc
Q 027543 42 NSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYG 121 (222)
Q Consensus 42 ~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~ 121 (222)
.+++++||||||++.+|.++++.+. +.+.++++||++++|+++.++++++.+++ .+++|+||||.........
T Consensus 3 ~mri~~isDiHg~~~~l~~~l~~~~--~~d~ii~~GDl~~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~~~~~~ 75 (246)
T 3rqz_A 3 AMRILIISDVHANLVALEAVLSDAG--RVDDIWSLGDIVGYGPRPRECVELVRVLA-----PNISVIGNHDWACIGRLSL 75 (246)
T ss_dssp CCCEEEECCCTTCHHHHHHHHHHHC--SCSEEEECSCCSSSSSCHHHHHHHHHHHC-----SSEECCCHHHHHHTCCCCC
T ss_pred CcEEEEEeecCCCHHHHHHHHHhcc--CCCEEEECCCcCCCCCCHHHHHHHHHhcC-----CCEEEeCchHHHHhccCCc
Confidence 4799999999999999999999887 67899999999999999999999998875 2799999999987542211
Q ss_pred --ch--HHHHHHhCChhHHHHHHHHhcccceEEEEcCcEEEEecCCCC
Q 027543 122 --FY--DECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSP 165 (222)
Q Consensus 122 --~~--~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHaGi~~ 165 (222)
+. ......+....+.....+|++.+|..... ++++++||++..
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~~~~~L~~lp~~~~~-~~i~~~Hg~p~~ 122 (246)
T 3rqz_A 76 DEFNPVARFASYWTTMQLQAEHLQYLESLPNRMID-GDWTVVHGSPRH 122 (246)
T ss_dssp C--CGGGGCHHHHHHHHCCHHHHHHHHHCCSEEEE-TTEEEESSCSSS
T ss_pred cccCHHHHHHHHHHHHHcCHHHHHHHHhCCcEEEE-CCEEEEECCcCC
Confidence 00 00001111122235567899999988774 579999999864
No 15
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.69 E-value=2.7e-17 Score=139.07 Aligned_cols=117 Identities=19% Similarity=0.168 Sum_probs=89.2
Q ss_pred CCcceeccCcCCHHHHHHHHHhcCCCCCCcEEEecccccCCCCcHHHHHHHHHhhhhCCCeEEEeCCCCchhhhhhhh--
Q 027543 43 SPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVY-- 120 (222)
Q Consensus 43 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~-- 120 (222)
.++++||||||++.+|.++++.+...+.+.+|++||++++|+++.++++++.+++ .+++|+||||.+.+....
T Consensus 12 ~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~~~~~~~ 86 (270)
T 3qfm_A 12 TKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMPGTGRRRILDLLDQLP-----ITARVLGNWEDSLWHGVRKE 86 (270)
T ss_dssp EEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSSSSCSHHHHHHHHTSC-----EEEECCCHHHHHHHHHHTTC
T ss_pred cEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHccC-----CEEEEcCChHHHHHHhhccc
Confidence 4899999999999999999998877678999999999999999999999998763 489999999998765322
Q ss_pred -cchHHH------HHHhCChhHHHHHHHHhcccceEEEE--cC-cEEEEecCCC
Q 027543 121 -GFYDEC------QRKYGNANAWRYCTDVFDYLTLSAII--DG-TVLCVHGGLS 164 (222)
Q Consensus 121 -~~~~~~------~~~~~~~~~~~~~~~~~~~lP~~~~i--~~-~~l~vHaGi~ 164 (222)
++.... ...|-...+.....+|++.||....+ ++ +++++||.+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p~ 140 (270)
T 3qfm_A 87 LDSTRPSQRYLLRQCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLPD 140 (270)
T ss_dssp SCTTSHHHHHHHHHHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBTT
T ss_pred cCCCcHHHHHHHHHHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCCC
Confidence 121110 01121122335678899999988755 34 7999997654
No 16
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=99.22 E-value=6.3e-12 Score=102.04 Aligned_cols=69 Identities=19% Similarity=0.311 Sum_probs=59.1
Q ss_pred CCcceeccCcCCHHHHHHHHHhcCCCCCCcEEEecccccCCC--------CcHHHHHHHHHhhhhCCCeEEEeCCCCchh
Q 027543 43 SPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGY--------NSLEVFTILLLLKARYPANITLLRGNHESR 114 (222)
Q Consensus 43 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~--------~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 114 (222)
++++++||+||++..+.++++.+...+.+.+|++||++++|+ ++.++++++.++. ..+++++||||..
T Consensus 26 mki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GNHD~~ 101 (208)
T 1su1_A 26 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA----HKVIAVRGNCDSE 101 (208)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTG----GGEEECCCTTCCH
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhcC----CceEEEECCCchH
Confidence 689999999999999999998875445689999999999998 3688999888765 2599999999986
Q ss_pred h
Q 027543 115 Q 115 (222)
Q Consensus 115 ~ 115 (222)
.
T Consensus 102 ~ 102 (208)
T 1su1_A 102 V 102 (208)
T ss_dssp H
T ss_pred H
Confidence 4
No 17
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=99.18 E-value=5.4e-11 Score=95.24 Aligned_cols=65 Identities=23% Similarity=0.274 Sum_probs=53.2
Q ss_pred CCcceeccCcCCHHHHHHHHHhcCCCCCCcEEEecccccCCCCcHHHHHHHHHhhhhCCCeEEEeCCCCchhhh
Q 027543 43 SPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQL 116 (222)
Q Consensus 43 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~ 116 (222)
++++++||+||++..+.++++.+...+.+.++++||+++. ++++.+.++ +..+++++||||....
T Consensus 26 m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~-----~~~~~l~~l----~~~~~~V~GNhD~~~~ 90 (190)
T 1s3l_A 26 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL-----FVIKEFENL----NANIIATYGNNDGERC 90 (190)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST-----HHHHHGGGC----SSEEEEECCTTCCCHH
T ss_pred eEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCH-----HHHHHHHhc----CCCEEEEeCCCcchHH
Confidence 7999999999999999999988765567899999999974 566666533 2369999999998654
No 18
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=99.10 E-value=2.1e-11 Score=96.74 Aligned_cols=62 Identities=18% Similarity=0.184 Sum_probs=50.6
Q ss_pred CCcceeccCcC--CHHHHHHHHHhcCCCCCCcEEEecccccCCCCcHHHHHHHHHhhhhCCCeEEEeCCCCchh
Q 027543 43 SPVTVCGDIHG--QFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESR 114 (222)
Q Consensus 43 ~~i~viGDiHG--~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 114 (222)
++++++||+|| +..++.++++.+. .+.|.+|++||++++ ++++++.++. ..+++++||||..
T Consensus 23 mri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~-----~~~~~l~~~~----~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 23 KRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL-----DTVILLEKFS----KEFYGVHGNMDYP 86 (178)
T ss_dssp EEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH-----HHHHHHHHHT----SSEEECCCSSSCG
T ss_pred eEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH-----HHHHHHHhcC----CCEEEEECCCCcH
Confidence 58999999997 7777888887754 456899999999983 7888887763 2499999999975
No 19
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.09 E-value=1e-10 Score=94.41 Aligned_cols=73 Identities=10% Similarity=0.176 Sum_probs=57.6
Q ss_pred CCCcceeccCcCCHHHHHHHHHhcCCCCCCcEEEecccccCCCCcHHHHHHHHHhhhhCCCeEEEeCCCCchhh
Q 027543 42 NSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQ 115 (222)
Q Consensus 42 ~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~ 115 (222)
.+|++++||+|++...+.++++.+...+.|.+|++||++++|+.+.+...++..++.. +..+++++||||...
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~-~~pv~~v~GNHD~~~ 77 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA-HLPTAYVPGPQDAPI 77 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG-CSCEEEECCTTSCSH
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc-CCcEEEECCCCCchh
Confidence 4789999999999999998888765445688999999999997666555556555543 234999999999864
No 20
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=98.92 E-value=2.3e-09 Score=87.15 Aligned_cols=94 Identities=14% Similarity=0.191 Sum_probs=63.3
Q ss_pred CCCcceeccCcCCHHH--HHHHHHh-cCCCCCCcEEEecccccCCCCcHHHHHHHHHhhhhCCCeEEEeCCCCchhhhhh
Q 027543 42 NSPVTVCGDIHGQFHD--LMKLFQT-GGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQ 118 (222)
Q Consensus 42 ~~~i~viGDiHG~~~~--l~~ll~~-~~~~~~~~~vflGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~ 118 (222)
.++++++||+|++... +.+.+.. +...+.|.+|++||+++ .++++++.++. ..+++++||||......
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~-----~~~l~~l~~~~----~~v~~V~GNHD~~~~~~ 95 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCS-----QEYVEMLKNIT----KNVYIVSGDLDSAIFNP 95 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCC-----HHHHHHHHHHC----SCEEECCCTTCCSCCBC
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCC-----HHHHHHHHHcC----CCEEEecCCCcCccccc
Confidence 5799999999998632 3222221 12345689999999997 57888887664 25999999999865331
Q ss_pred hhcchHHHHHHhCChhHHHHHHHHhcccceEEEE--cC-cEEEEecCCC
Q 027543 119 VYGFYDECQRKYGNANAWRYCTDVFDYLTLSAII--DG-TVLCVHGGLS 164 (222)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i--~~-~~l~vHaGi~ 164 (222)
. .+++..+|....+ ++ +++++||.+.
T Consensus 96 ~--------------------~~~~~~lp~~~~~~~~~~~i~l~Hg~~~ 124 (215)
T 2a22_A 96 D--------------------PESNGVFPEYVVVQIGEFKIGLMHGNQV 124 (215)
T ss_dssp C--------------------GGGTBCCCSEEEEEETTEEEEEECSTTS
T ss_pred C--------------------hhhHhhCCceEEEecCCeEEEEEcCCcc
Confidence 0 1245667755433 33 7999998763
No 21
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=98.89 E-value=5e-10 Score=92.52 Aligned_cols=74 Identities=9% Similarity=0.058 Sum_probs=56.3
Q ss_pred CCCcceeccCcCCHHHHHHHHHhcCCCCCCcEEEecccccCCCCc--------------------------HHHHHHHHH
Q 027543 42 NSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNS--------------------------LEVFTILLL 95 (222)
Q Consensus 42 ~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s--------------------------~evl~~l~~ 95 (222)
.+|++++||+|++...+.++++.+...+.|.+|++||++++|+.+ .....++..
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~ 84 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFRE 84 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHHHH
Confidence 478999999999999999888877545678999999999998652 224445555
Q ss_pred hhhhCCCeEEEeCCCCchhhh
Q 027543 96 LKARYPANITLLRGNHESRQL 116 (222)
Q Consensus 96 l~~~~p~~v~~lrGNHE~~~~ 116 (222)
++.. +..+++++||||....
T Consensus 85 l~~~-~~pv~~v~GNHD~~~~ 104 (260)
T 2yvt_A 85 IGEL-GVKTFVVPGKNDAPLK 104 (260)
T ss_dssp HHTT-CSEEEEECCTTSCCHH
T ss_pred HHhc-CCcEEEEcCCCCchhh
Confidence 5432 3359999999998653
No 22
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=98.88 E-value=3.6e-09 Score=84.32 Aligned_cols=64 Identities=19% Similarity=0.253 Sum_probs=46.8
Q ss_pred CCcceeccCcCCHH--HHHH-HHHhcCCCCCCcEEEecccccCCCCcHHHHHHHHHhhhhCCCeEEEeCCCCchhh
Q 027543 43 SPVTVCGDIHGQFH--DLMK-LFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQ 115 (222)
Q Consensus 43 ~~i~viGDiHG~~~--~l~~-ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~ 115 (222)
++++++||+|++.. ++.+ +.+.+...+.|.++++||+++ .++++++.++. ..+++++||||...
T Consensus 11 m~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~-----~~~~~~l~~~~----~~~~~v~GNhD~~~ 77 (192)
T 1z2w_A 11 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT-----KESYDYLKTLA----GDVHIVRGDFDENL 77 (192)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS-----HHHHHHHHHHC----SEEEECCCTTCCCT
T ss_pred eEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCC-----HHHHHHHHhcC----CCEEEEcCCcCccc
Confidence 78999999999753 2333 333333345688999999996 57888877654 25999999999853
No 23
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=98.85 E-value=1.2e-09 Score=85.94 Aligned_cols=58 Identities=17% Similarity=0.068 Sum_probs=45.5
Q ss_pred CCcceeccCcCCHHHHHHHHHhcCCCCCCcEEEecccccCCCCcHHHHHHHHHhhhhCCCeEEEeCCCCchh
Q 027543 43 SPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESR 114 (222)
Q Consensus 43 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 114 (222)
++++++||+||+..++.++++.+.. +.|.++++||+.. +++. .+. . .+++++||||..
T Consensus 7 m~i~~isD~H~~~~~~~~~~~~~~~-~~d~i~~~GD~~~------~~l~---~l~--~--~~~~v~GNhD~~ 64 (176)
T 3ck2_A 7 QTIIVMSDSHGDSLIVEEVRDRYVG-KVDAVFHNGDSEL------RPDS---PLW--E--GIRVVKGNMDFY 64 (176)
T ss_dssp EEEEEECCCTTCHHHHHHHHHHHTT-TSSEEEECSCCCS------CTTC---GGG--T--TEEECCCTTCCS
T ss_pred cEEEEEecCCCCHHHHHHHHHHhhc-CCCEEEECCCCch------HHHH---hhh--C--CeEEecCcccch
Confidence 6899999999999999999998765 6789999999721 2222 222 1 499999999975
No 24
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=98.76 E-value=5.6e-09 Score=83.28 Aligned_cols=70 Identities=21% Similarity=0.245 Sum_probs=51.5
Q ss_pred CCCcceeccCcCCHHH-------------HHHHHHhcCC--CCCCcEEEecccccCCCCcHHHHHHHHHhhhhCCCeEEE
Q 027543 42 NSPVTVCGDIHGQFHD-------------LMKLFQTGGH--VPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITL 106 (222)
Q Consensus 42 ~~~i~viGDiHG~~~~-------------l~~ll~~~~~--~~~~~~vflGD~vdrG~~s~evl~~l~~l~~~~p~~v~~ 106 (222)
.++++++||+|+.... +.++++.+.. .+.|.++++||++++|++..++++++.++. ..+++
T Consensus 1 ~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~l~~l~----~~~~~ 76 (195)
T 1xm7_A 1 NAMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNEYLRIWKALP----GRKIL 76 (195)
T ss_dssp CCCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTSHHHHHHHSS----SEEEE
T ss_pred CcEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHHHHCC----CCEEE
Confidence 3789999999964332 2233333332 356899999999999977778888887764 35999
Q ss_pred eCCCCchhh
Q 027543 107 LRGNHESRQ 115 (222)
Q Consensus 107 lrGNHE~~~ 115 (222)
++||||...
T Consensus 77 v~GNhD~~~ 85 (195)
T 1xm7_A 77 VMGNHDKDK 85 (195)
T ss_dssp ECCTTCCCH
T ss_pred EeCCCCCch
Confidence 999999854
No 25
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=98.56 E-value=4.6e-08 Score=83.17 Aligned_cols=73 Identities=21% Similarity=0.307 Sum_probs=52.5
Q ss_pred CCCcceeccCcCC------------HHHHHHHHHhcCC--CCCCcEEEecccccCCCCcH--HHHHHHHHhhhhCCCeEE
Q 027543 42 NSPVTVCGDIHGQ------------FHDLMKLFQTGGH--VPETNYIFMGDFVDRGYNSL--EVFTILLLLKARYPANIT 105 (222)
Q Consensus 42 ~~~i~viGDiHG~------------~~~l~~ll~~~~~--~~~~~~vflGD~vdrG~~s~--evl~~l~~l~~~~p~~v~ 105 (222)
.++++++||+|.. ...+.++++.+.. .+.+.+|++||+++.|.... .+..++..+.......++
T Consensus 25 ~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~~~pv~ 104 (330)
T 3ib7_A 25 DYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELV 104 (330)
T ss_dssp SEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHhhcCCCEE
Confidence 5789999999963 6788888887764 45688999999999986421 234444444222233599
Q ss_pred EeCCCCchh
Q 027543 106 LLRGNHESR 114 (222)
Q Consensus 106 ~lrGNHE~~ 114 (222)
+++||||..
T Consensus 105 ~v~GNHD~~ 113 (330)
T 3ib7_A 105 WVMGNHDDR 113 (330)
T ss_dssp ECCCTTSCH
T ss_pred EeCCCCCCH
Confidence 999999964
No 26
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=98.54 E-value=1.2e-07 Score=78.41 Aligned_cols=69 Identities=19% Similarity=0.175 Sum_probs=49.9
Q ss_pred CCcceeccCcCCH------------HHHHHHHHhcCCC--CCCcEEEecccccCCCCcH--HHHHHHHHhhhhCCCeEEE
Q 027543 43 SPVTVCGDIHGQF------------HDLMKLFQTGGHV--PETNYIFMGDFVDRGYNSL--EVFTILLLLKARYPANITL 106 (222)
Q Consensus 43 ~~i~viGDiHG~~------------~~l~~ll~~~~~~--~~~~~vflGD~vdrG~~s~--evl~~l~~l~~~~p~~v~~ 106 (222)
++++++||+|+.. ..|.++++.+... +.+.+|++||+++.|..+. .+.+.+.++ +..++.
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l----~~p~~~ 76 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQILGSL----NYPLYL 76 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHHTTC----SSCEEE
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhc----CCCEEE
Confidence 5789999999984 6788888876543 3588999999999887432 233333322 224999
Q ss_pred eCCCCchhh
Q 027543 107 LRGNHESRQ 115 (222)
Q Consensus 107 lrGNHE~~~ 115 (222)
++||||...
T Consensus 77 v~GNHD~~~ 85 (274)
T 3d03_A 77 IPGNHDDKA 85 (274)
T ss_dssp ECCTTSCHH
T ss_pred ECCCCCCHH
Confidence 999999753
No 27
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=98.54 E-value=6.4e-08 Score=83.41 Aligned_cols=76 Identities=21% Similarity=0.299 Sum_probs=52.1
Q ss_pred cccc-CCCcceeccCc-C----C-----------HHHHHHHHHhcCCCCCCcEEEecc-cccCCCCcHH----HHHHHHH
Q 027543 38 VQPV-NSPVTVCGDIH-G----Q-----------FHDLMKLFQTGGHVPETNYIFMGD-FVDRGYNSLE----VFTILLL 95 (222)
Q Consensus 38 ~~~~-~~~i~viGDiH-G----~-----------~~~l~~ll~~~~~~~~~~~vflGD-~vdrG~~s~e----vl~~l~~ 95 (222)
+++. .+|++.+||+| | . ...|.++++.+...+.|.+|+.|| ++|++..+.+ +.+++.+
T Consensus 13 ~~~~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~ 92 (336)
T 2q8u_A 13 VINLKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKR 92 (336)
T ss_dssp CTTCCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHH
T ss_pred heecCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHH
Confidence 4444 58999999999 7 3 456777777665556688999999 9999987765 4566666
Q ss_pred hhhhCCCeEEEeCCCCchhh
Q 027543 96 LKARYPANITLLRGNHESRQ 115 (222)
Q Consensus 96 l~~~~p~~v~~lrGNHE~~~ 115 (222)
+....| ++++.||||...
T Consensus 93 L~~~~p--v~~i~GNHD~~~ 110 (336)
T 2q8u_A 93 MMRTAP--VVVLPGNHDWKG 110 (336)
T ss_dssp HHHHSC--EEECCC------
T ss_pred HHhcCC--EEEECCCCCccc
Confidence 654334 999999999864
No 28
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=98.52 E-value=8.3e-08 Score=81.80 Aligned_cols=88 Identities=15% Similarity=0.130 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHH------hhCCCcccc-----CCCcceeccCcCCHHHHHHHHHhcCCCCCCcEEEecccccCCCCc
Q 027543 18 EDELQLLCEYVKEIL------IEESNVQPV-----NSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNS 86 (222)
Q Consensus 18 ~~~~~~l~~~~~~~~------~~e~~~~~~-----~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s 86 (222)
+.++.+.+..-...+ +..|...+. .+|+++|||+||+...+ ...+.|.+|++||++++|...
T Consensus 24 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~mri~~iSD~H~~~~~l-------~i~~~D~vi~aGDl~~~g~~~ 96 (296)
T 3rl5_A 24 PTQAFTHYNINQSRFQPPHVHMVDPIPYDTPKPAGHTRFVCISDTRSRTDGI-------QMPYGDILLHTGDFTELGLPS 96 (296)
T ss_dssp HHHHHHHHHHHHCTTCTTTSEECCCCCTTSCCCTTEEEEEEEBCCTTCCTTC-------CCCSCSEEEECSCCSSSCCHH
T ss_pred hHHHHHHHhhccccccCCceeecccCCCCCCCCCCCeEEEEEeeCCCCcchh-------ccCCCCEEEECCcccCCCCHH
Confidence 555666665554422 223333322 27899999999997643 234568899999999998742
Q ss_pred --HHHHHHHHHhhhhCCCeEEEeCCCCchhh
Q 027543 87 --LEVFTILLLLKARYPANITLLRGNHESRQ 115 (222)
Q Consensus 87 --~evl~~l~~l~~~~p~~v~~lrGNHE~~~ 115 (222)
.+++++|.++. . ..+++|.||||..+
T Consensus 97 e~~~~~~~L~~l~--~-~~v~~V~GNHD~~~ 124 (296)
T 3rl5_A 97 EVKKFNDWLGNLP--Y-EYKIVIAGNHELTF 124 (296)
T ss_dssp HHHHHHHHHHTSC--C-SEEEECCCTTCGGG
T ss_pred HHHHHHHHHHhCC--C-CeEEEEcCCccccc
Confidence 23455554442 1 25899999999854
No 29
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=98.43 E-value=2.8e-07 Score=81.13 Aligned_cols=73 Identities=12% Similarity=0.154 Sum_probs=53.9
Q ss_pred CCCcceeccCcCCH-------------HHHHHHHHhcCCCCCCcEEEecccccCCCCcHH----HHHHHHHhhhhCCCeE
Q 027543 42 NSPVTVCGDIHGQF-------------HDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLE----VFTILLLLKARYPANI 104 (222)
Q Consensus 42 ~~~i~viGDiHG~~-------------~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~e----vl~~l~~l~~~~p~~v 104 (222)
.++++.+||+|+.. ..|.++++.+...+.|.+|+.||++|++..+.+ +.+++..++.. +-.+
T Consensus 20 ~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~-~~pv 98 (386)
T 3av0_A 20 HMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHEN-NIKV 98 (386)
T ss_dssp CCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHT-TCEE
T ss_pred CeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhc-CCcE
Confidence 47999999999762 467788877766667899999999999854433 34555555432 2359
Q ss_pred EEeCCCCchhh
Q 027543 105 TLLRGNHESRQ 115 (222)
Q Consensus 105 ~~lrGNHE~~~ 115 (222)
++|.||||...
T Consensus 99 ~~v~GNHD~~~ 109 (386)
T 3av0_A 99 YIVAGNHEMPR 109 (386)
T ss_dssp EECCCGGGSCS
T ss_pred EEEcCCCCCCc
Confidence 99999999754
No 30
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=98.38 E-value=1.2e-07 Score=79.88 Aligned_cols=73 Identities=14% Similarity=0.077 Sum_probs=51.0
Q ss_pred CCCcceeccCcCCH-------------------HHHHHHHHhcCCCCCCcEEEecccccCCCC----cHHHHHHHHHhhh
Q 027543 42 NSPVTVCGDIHGQF-------------------HDLMKLFQTGGHVPETNYIFMGDFVDRGYN----SLEVFTILLLLKA 98 (222)
Q Consensus 42 ~~~i~viGDiHG~~-------------------~~l~~ll~~~~~~~~~~~vflGD~vdrG~~----s~evl~~l~~l~~ 98 (222)
.++++++||+|... ..+.++++.+...+.+.+|++||+++.+.. +.+.+..+.+.-.
T Consensus 5 ~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~l~ 84 (322)
T 2nxf_A 5 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELD 84 (322)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHH
T ss_pred ceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHHHH
Confidence 46899999999875 557777776654566889999999998751 2333333333322
Q ss_pred hCCCeEEEeCCCCchh
Q 027543 99 RYPANITLLRGNHESR 114 (222)
Q Consensus 99 ~~p~~v~~lrGNHE~~ 114 (222)
..+..+++++||||..
T Consensus 85 ~~~~p~~~v~GNHD~~ 100 (322)
T 2nxf_A 85 ACSVDVHHVWGNHEFY 100 (322)
T ss_dssp TTCSEEEECCCHHHHH
T ss_pred hcCCcEEEecCCCCcc
Confidence 2344699999999984
No 31
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=98.37 E-value=3.5e-07 Score=78.81 Aligned_cols=71 Identities=15% Similarity=0.228 Sum_probs=50.1
Q ss_pred CCcceeccCcCCH-------------HHHHHHHHhcCCCCCCcEEEecccccCCCCcHHH----HHHHHHhhhhCCCeEE
Q 027543 43 SPVTVCGDIHGQF-------------HDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEV----FTILLLLKARYPANIT 105 (222)
Q Consensus 43 ~~i~viGDiHG~~-------------~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~ev----l~~l~~l~~~~p~~v~ 105 (222)
|+++.+||+|... ..+.++++.+...+.|.+|+.||++|++..+.+. .+.+..++.. +-.++
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~-~~~v~ 79 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEH-SIPVF 79 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTT-TCCEE
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHC-CCcEE
Confidence 5789999999864 4566677666555668999999999987544433 3344444321 23499
Q ss_pred EeCCCCchh
Q 027543 106 LLRGNHESR 114 (222)
Q Consensus 106 ~lrGNHE~~ 114 (222)
++.||||..
T Consensus 80 ~v~GNHD~~ 88 (333)
T 1ii7_A 80 AIEGNHDRT 88 (333)
T ss_dssp EECCTTTCC
T ss_pred EeCCcCCCc
Confidence 999999985
No 32
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=98.19 E-value=1.3e-06 Score=77.80 Aligned_cols=73 Identities=18% Similarity=0.197 Sum_probs=51.3
Q ss_pred CCCcceeccCcCC--------------------------HHHHHHHHHhcCCCCCCcEEEecccccCCCCc--HHHHHHH
Q 027543 42 NSPVTVCGDIHGQ--------------------------FHDLMKLFQTGGHVPETNYIFMGDFVDRGYNS--LEVFTIL 93 (222)
Q Consensus 42 ~~~i~viGDiHG~--------------------------~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s--~evl~~l 93 (222)
..++++++|+|.. ...+.++++.+...+.+.+|++||+++.|... .++...+
T Consensus 39 ~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l 118 (443)
T 2xmo_A 39 NLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGEKTSHEELAKKL 118 (443)
T ss_dssp CEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCCHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHH
Confidence 4689999999974 45667777665444558899999999988643 3344555
Q ss_pred HHhhhhCCCeEEEeCCCCchhh
Q 027543 94 LLLKARYPANITLLRGNHESRQ 115 (222)
Q Consensus 94 ~~l~~~~p~~v~~lrGNHE~~~ 115 (222)
..+.. .+..++.++||||...
T Consensus 119 ~~l~~-~~~~~~~v~GNHD~~~ 139 (443)
T 2xmo_A 119 TQVEK-NGTQVFVVPGNHDINN 139 (443)
T ss_dssp HHHHH-TTCEEEEECCTTTSSC
T ss_pred HHHHh-CCCeEEEECCcCCCCC
Confidence 55532 1335999999999853
No 33
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=98.13 E-value=1.4e-06 Score=76.58 Aligned_cols=70 Identities=17% Similarity=0.219 Sum_probs=50.3
Q ss_pred CCcceeccCcCCHH----------------HHHHHHHhcCCCCCCcEEEecccc-cCCCCcHHH----HHHHHHhhhhCC
Q 027543 43 SPVTVCGDIHGQFH----------------DLMKLFQTGGHVPETNYIFMGDFV-DRGYNSLEV----FTILLLLKARYP 101 (222)
Q Consensus 43 ~~i~viGDiHG~~~----------------~l~~ll~~~~~~~~~~~vflGD~v-drG~~s~ev----l~~l~~l~~~~p 101 (222)
||++.++|+|.... .+.++++.+...+.|.+|+.||++ |++..+.+. ..++..+....
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~~- 79 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTA- 79 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHHS-
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhCC-
Confidence 57899999997544 556666655545668899999999 887666543 34444454333
Q ss_pred CeEEEeCCCCchh
Q 027543 102 ANITLLRGNHESR 114 (222)
Q Consensus 102 ~~v~~lrGNHE~~ 114 (222)
.++++.||||..
T Consensus 80 -~v~~i~GNHD~~ 91 (379)
T 3tho_B 80 -PVVVLPGNQDWK 91 (379)
T ss_dssp -CEEECCCTTSCT
T ss_pred -CEEEEcCCCccc
Confidence 499999999964
No 34
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=97.87 E-value=9.2e-06 Score=72.59 Aligned_cols=54 Identities=19% Similarity=0.185 Sum_probs=41.5
Q ss_pred CCCcceeccCcCCH------------HHHHHHHHhcCCCCCCcEEEecccccCCCCcHHHHHHHHH
Q 027543 42 NSPVTVCGDIHGQF------------HDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLL 95 (222)
Q Consensus 42 ~~~i~viGDiHG~~------------~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~ 95 (222)
.++++.++|+|-.. ..|.++++.+.....|.+|+.||++|++..+.+++..+.+
T Consensus 32 ~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~ 97 (431)
T 3t1i_A 32 TFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLE 97 (431)
T ss_dssp EEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHH
T ss_pred CEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHH
Confidence 47899999999642 3667777776666678999999999999887776554444
No 35
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=97.84 E-value=1.6e-05 Score=71.59 Aligned_cols=52 Identities=12% Similarity=0.139 Sum_probs=41.2
Q ss_pred CCCcceeccCcCC------------HHHHHHHHHhcCCCCCCcEEEecccccCCCCcHHHHHHH
Q 027543 42 NSPVTVCGDIHGQ------------FHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTIL 93 (222)
Q Consensus 42 ~~~i~viGDiHG~------------~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l 93 (222)
.++++.++|+|-. ...|.++++.+.....|.+|+.||++|++..+.+++..+
T Consensus 76 ~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~ 139 (472)
T 4fbk_A 76 TIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQA 139 (472)
T ss_dssp CEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHH
T ss_pred CeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHH
Confidence 3689999999974 346778887776667799999999999999887765443
No 36
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=97.84 E-value=1.8e-05 Score=70.46 Aligned_cols=51 Identities=12% Similarity=0.149 Sum_probs=40.9
Q ss_pred CCCcceeccCcCC------------HHHHHHHHHhcCCCCCCcEEEecccccCCCCcHHHHHH
Q 027543 42 NSPVTVCGDIHGQ------------FHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTI 92 (222)
Q Consensus 42 ~~~i~viGDiHG~------------~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~ 92 (222)
.++++.++|+|-. ...|.++++.+.....|.+|+.||++|++..+.+++..
T Consensus 13 ~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~ 75 (417)
T 4fbw_A 13 TIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQ 75 (417)
T ss_dssp CEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHH
T ss_pred CeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHH
Confidence 4689999999975 34677788777666778999999999999888775444
No 37
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=97.60 E-value=3.7e-05 Score=68.10 Aligned_cols=70 Identities=17% Similarity=0.100 Sum_probs=46.1
Q ss_pred CCCcceeccCcCCHHHHHHHHHhcCCC--CCCcEEEecccccCCCCc-------HHHHHHHHHhhhhCCCeEEEeCCCCc
Q 027543 42 NSPVTVCGDIHGQFHDLMKLFQTGGHV--PETNYIFMGDFVDRGYNS-------LEVFTILLLLKARYPANITLLRGNHE 112 (222)
Q Consensus 42 ~~~i~viGDiHG~~~~l~~ll~~~~~~--~~~~~vflGD~vdrG~~s-------~evl~~l~~l~~~~p~~v~~lrGNHE 112 (222)
..+++++||+|....... .++.+... ..+.+|++||+++.+... .+...++..+....| ++.+.||||
T Consensus 119 ~~~f~~igD~~~~~~~~~-~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~P--~~~v~GNHD 195 (424)
T 2qfp_A 119 PYTFGLIGDLGQSFDSNT-TLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQP--WIWTAGNHE 195 (424)
T ss_dssp CEEEEEECSCTTBHHHHH-HHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTSC--EEECCCHHH
T ss_pred CeEEEEEEeCCCCCChHH-HHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHhcCC--eEeecCCcc
Confidence 357999999998876543 34433322 558899999999764211 122344444444445 999999999
Q ss_pred hh
Q 027543 113 SR 114 (222)
Q Consensus 113 ~~ 114 (222)
..
T Consensus 196 ~~ 197 (424)
T 2qfp_A 196 IE 197 (424)
T ss_dssp HC
T ss_pred cc
Confidence 75
No 38
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=97.56 E-value=1.8e-05 Score=66.11 Aligned_cols=73 Identities=16% Similarity=0.072 Sum_probs=42.5
Q ss_pred CCCcceeccCcCCH---------HHHHHHHHh-cCCCCCCcEEEecccccC-CC---CcHHHHHHHHHhhh--hC-CCeE
Q 027543 42 NSPVTVCGDIHGQF---------HDLMKLFQT-GGHVPETNYIFMGDFVDR-GY---NSLEVFTILLLLKA--RY-PANI 104 (222)
Q Consensus 42 ~~~i~viGDiHG~~---------~~l~~ll~~-~~~~~~~~~vflGD~vdr-G~---~s~evl~~l~~l~~--~~-p~~v 104 (222)
..+++++||+|... ..+.+.+.. +...+.+.+|++||++.. |. ...+....+..+.. .. +..+
T Consensus 6 ~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~p~ 85 (313)
T 1ute_A 6 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPW 85 (313)
T ss_dssp CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCCE
T ss_pred ceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcCCCE
Confidence 46899999999862 234333332 223356889999999753 11 12233333322110 01 2349
Q ss_pred EEeCCCCchh
Q 027543 105 TLLRGNHESR 114 (222)
Q Consensus 105 ~~lrGNHE~~ 114 (222)
+.++||||..
T Consensus 86 ~~v~GNHD~~ 95 (313)
T 1ute_A 86 HVLAGNHDHL 95 (313)
T ss_dssp EECCCHHHHH
T ss_pred EEECCCCccC
Confidence 9999999974
No 39
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=97.35 E-value=0.00014 Score=64.32 Aligned_cols=71 Identities=18% Similarity=0.077 Sum_probs=44.5
Q ss_pred CCCcceeccCcCCHHHHHHHHHhcC-C-CCCCcEEEecccccCCCC----cH---HHHHHHHHhhhhCCCeEEEeCCCCc
Q 027543 42 NSPVTVCGDIHGQFHDLMKLFQTGG-H-VPETNYIFMGDFVDRGYN----SL---EVFTILLLLKARYPANITLLRGNHE 112 (222)
Q Consensus 42 ~~~i~viGDiHG~~~~l~~ll~~~~-~-~~~~~~vflGD~vdrG~~----s~---evl~~l~~l~~~~p~~v~~lrGNHE 112 (222)
..+++++||+|...... ..++.+. . ...+-+|++||+++.+.. .. +....+..+....| ++.+.||||
T Consensus 126 ~~~f~~~gD~~~~~~~~-~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~P--~~~v~GNHD 202 (426)
T 1xzw_A 126 PYVFGLIGDIGQTHDSN-TTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQP--WIWTAGNHE 202 (426)
T ss_dssp CEEEEEECSCTTBHHHH-HHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSC--EECCCCGGG
T ss_pred CeEEEEEEeCCCCCchH-HHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcCC--EEEeccccc
Confidence 35799999999875332 2233322 2 256889999999965321 11 12344444544445 999999999
Q ss_pred hhh
Q 027543 113 SRQ 115 (222)
Q Consensus 113 ~~~ 115 (222)
...
T Consensus 203 ~~~ 205 (426)
T 1xzw_A 203 IDY 205 (426)
T ss_dssp CCC
T ss_pred ccc
Confidence 753
No 40
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=96.57 E-value=0.00069 Score=58.62 Aligned_cols=72 Identities=11% Similarity=-0.020 Sum_probs=42.7
Q ss_pred CCcceeccCcCCHHHH----HHHHHhcCCCCCCcEEEecccccCCCCcH------HHHHHHHHhh-hhCCCeEEEeCCCC
Q 027543 43 SPVTVCGDIHGQFHDL----MKLFQTGGHVPETNYIFMGDFVDRGYNSL------EVFTILLLLK-ARYPANITLLRGNH 111 (222)
Q Consensus 43 ~~i~viGDiHG~~~~l----~~ll~~~~~~~~~~~vflGD~vdrG~~s~------evl~~l~~l~-~~~p~~v~~lrGNH 111 (222)
.+++++||.|.....- ..+.+.+...+.+-+|++||+++.|..+. +.++.+.... ....-.++.++|||
T Consensus 4 l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlGNH 83 (342)
T 3tgh_A 4 LRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLGTR 83 (342)
T ss_dssp EEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCCHH
T ss_pred EEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCCCC
Confidence 4789999999743222 22222333345688999999998887432 2222221110 11122489999999
Q ss_pred chh
Q 027543 112 ESR 114 (222)
Q Consensus 112 E~~ 114 (222)
|..
T Consensus 84 D~~ 86 (342)
T 3tgh_A 84 DWT 86 (342)
T ss_dssp HHT
T ss_pred ccC
Confidence 975
No 41
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=96.44 E-value=0.0014 Score=59.41 Aligned_cols=67 Identities=21% Similarity=0.110 Sum_probs=44.2
Q ss_pred CCCcceeccCcCCH----------HHHHHHHHhcCC-----CCCCcEEEecccccCCCC-----cHHHHHHHHHhhhhCC
Q 027543 42 NSPVTVCGDIHGQF----------HDLMKLFQTGGH-----VPETNYIFMGDFVDRGYN-----SLEVFTILLLLKARYP 101 (222)
Q Consensus 42 ~~~i~viGDiHG~~----------~~l~~ll~~~~~-----~~~~~~vflGD~vdrG~~-----s~evl~~l~~l~~~~p 101 (222)
..+|+.++|+||.+ ..+..+++++.. .+++.++..||+++..+. ...+++.+..+. +
T Consensus 8 ~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg---~ 84 (516)
T 1hp1_A 8 KITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG---Y 84 (516)
T ss_dssp EEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT---C
T ss_pred EEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhccC---C
Confidence 46799999999974 245566655432 134567779999876542 234566665554 2
Q ss_pred CeEEEeCCCCch
Q 027543 102 ANITLLRGNHES 113 (222)
Q Consensus 102 ~~v~~lrGNHE~ 113 (222)
.++..||||.
T Consensus 85 --d~~~~GNHEf 94 (516)
T 1hp1_A 85 --DAMAIGNHEF 94 (516)
T ss_dssp --CEEECCGGGG
T ss_pred --CEEeeccccc
Confidence 3678899997
No 42
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=96.31 E-value=0.0019 Score=58.83 Aligned_cols=67 Identities=19% Similarity=0.109 Sum_probs=44.9
Q ss_pred CCCcceeccCcCCH----------------HHHHHHHHhcCCCCCC-cEEEecccccCCCCc----------HHHHHHHH
Q 027543 42 NSPVTVCGDIHGQF----------------HDLMKLFQTGGHVPET-NYIFMGDFVDRGYNS----------LEVFTILL 94 (222)
Q Consensus 42 ~~~i~viGDiHG~~----------------~~l~~ll~~~~~~~~~-~~vflGD~vdrG~~s----------~evl~~l~ 94 (222)
..+|+.++|+||++ ..+..+++++.....+ .++..||.++.++.+ ..+++.+.
T Consensus 19 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~~ln 98 (527)
T 3qfk_A 19 NIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDFYN 98 (527)
T ss_dssp EEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHHHHHHHHTTCSSHHHHHHHH
T ss_pred cEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHHHHHHhhcccCcchHHHHHH
Confidence 46899999999985 3666777766544333 445589999977543 34566555
Q ss_pred HhhhhCCCeEEEeCCCCch
Q 027543 95 LLKARYPANITLLRGNHES 113 (222)
Q Consensus 95 ~l~~~~p~~v~~lrGNHE~ 113 (222)
.+. + -++..||||.
T Consensus 99 ~lg---~--D~~t~GNHef 112 (527)
T 3qfk_A 99 RMA---F--DFGTLGNHEF 112 (527)
T ss_dssp HTC---C--CEECCCGGGG
T ss_pred hcC---C--cEEecccccc
Confidence 553 2 3466899994
No 43
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=95.99 E-value=0.004 Score=57.10 Aligned_cols=68 Identities=18% Similarity=0.180 Sum_probs=45.0
Q ss_pred CCCcceeccCcCCH-----------------HHHHHHHHhcCCCCCC-cEEEecccccCCCC-----cHHHHHHHHHhhh
Q 027543 42 NSPVTVCGDIHGQF-----------------HDLMKLFQTGGHVPET-NYIFMGDFVDRGYN-----SLEVFTILLLLKA 98 (222)
Q Consensus 42 ~~~i~viGDiHG~~-----------------~~l~~ll~~~~~~~~~-~~vflGD~vdrG~~-----s~evl~~l~~l~~ 98 (222)
..+|+.++|+||++ ..+..+++++.....+ .++..||+++..+. ...+++.+..+.
T Consensus 29 ~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~lg- 107 (552)
T 2z1a_A 29 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHRLR- 107 (552)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHTT-
T ss_pred eEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHhcC-
Confidence 46799999999763 4666677665433334 56668999997653 234555555443
Q ss_pred hCCCeEEEeCCCCchh
Q 027543 99 RYPANITLLRGNHESR 114 (222)
Q Consensus 99 ~~p~~v~~lrGNHE~~ 114 (222)
+ -++..||||..
T Consensus 108 --~--d~~~lGNHEfd 119 (552)
T 2z1a_A 108 --Y--RAMALGNHEFD 119 (552)
T ss_dssp --C--CEEECCGGGGT
T ss_pred --C--Ccccccccccc
Confidence 2 36788999973
No 44
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=95.75 E-value=0.0042 Score=56.89 Aligned_cols=67 Identities=21% Similarity=0.187 Sum_probs=45.4
Q ss_pred CCCcceeccCcCC--------------------HHHHHHHHHhcCCC-CCCcEEEecccccCCCCc-----HHHHHHHHH
Q 027543 42 NSPVTVCGDIHGQ--------------------FHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNS-----LEVFTILLL 95 (222)
Q Consensus 42 ~~~i~viGDiHG~--------------------~~~l~~ll~~~~~~-~~~~~vflGD~vdrG~~s-----~evl~~l~~ 95 (222)
..+|+.++|+||+ +..+..+++++... +++.++..||.++..+.+ ..+++.+.+
T Consensus 25 ~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~ln~ 104 (546)
T 4h2g_A 25 ELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNA 104 (546)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHH
T ss_pred EEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHHHh
Confidence 4579999999986 35566666665432 345667789999977532 445666655
Q ss_pred hhhhCCCeEEEeCCCCch
Q 027543 96 LKARYPANITLLRGNHES 113 (222)
Q Consensus 96 l~~~~p~~v~~lrGNHE~ 113 (222)
+. + -++..||||.
T Consensus 105 lg---~--d~~~~GNHEf 117 (546)
T 4h2g_A 105 LR---Y--DAMALGNHEF 117 (546)
T ss_dssp HT---C--SEEECCGGGG
T ss_pred cC---C--cEEeccCccc
Confidence 54 2 3577899995
No 45
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=95.49 E-value=0.0063 Score=51.20 Aligned_cols=69 Identities=17% Similarity=0.110 Sum_probs=44.3
Q ss_pred cCCCcceeccCcCCH--HHHHHHHHhcCCC-CCCcEEEecccccCC-CCcHHHHHHHHHhhhhCCCeEEEeCCCCchh
Q 027543 41 VNSPVTVCGDIHGQF--HDLMKLFQTGGHV-PETNYIFMGDFVDRG-YNSLEVFTILLLLKARYPANITLLRGNHESR 114 (222)
Q Consensus 41 ~~~~i~viGDiHG~~--~~l~~ll~~~~~~-~~~~~vflGD~vdrG-~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 114 (222)
.++++.++|||||.. ..+...++++... +.+.++..||-.--| +.+..+.+.+..+.. .+ +-.||||.-
T Consensus 3 ~~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~~~~~~~~ln~~G~----Da-~TlGNHefD 75 (281)
T 1t71_A 3 NSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGV----NY-ITMGNHTWF 75 (281)
T ss_dssp CCCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHHHHHHHHHHTC----CE-EECCTTTTC
T ss_pred ceEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCcCHHHHHHHHhcCC----CE-EEEccCccc
Confidence 358999999999985 3344455544322 236677767665444 557778888777753 24 455999963
No 46
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=95.46 E-value=0.0091 Score=55.05 Aligned_cols=67 Identities=12% Similarity=0.046 Sum_probs=43.7
Q ss_pred CCCcceeccCcCCH---------------------HHHHHHHHhcCCC-CCCcEEEecccccCCC-----CcHHHHHHHH
Q 027543 42 NSPVTVCGDIHGQF---------------------HDLMKLFQTGGHV-PETNYIFMGDFVDRGY-----NSLEVFTILL 94 (222)
Q Consensus 42 ~~~i~viGDiHG~~---------------------~~l~~ll~~~~~~-~~~~~vflGD~vdrG~-----~s~evl~~l~ 94 (222)
..+|+.++|+||++ ..+..+++++... ++..++..||.++..+ ....+++.+.
T Consensus 12 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln 91 (579)
T 3ztv_A 12 ELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAVMN 91 (579)
T ss_dssp EEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHHHH
T ss_pred EEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHHHH
Confidence 45899999999883 4456666655432 3345666899998653 2344566665
Q ss_pred HhhhhCCCeEEEeCCCCch
Q 027543 95 LLKARYPANITLLRGNHES 113 (222)
Q Consensus 95 ~l~~~~p~~v~~lrGNHE~ 113 (222)
.+. + -++..||||.
T Consensus 92 ~lg---~--D~~tlGNHEf 105 (579)
T 3ztv_A 92 AGN---F--HYFTLGNHEF 105 (579)
T ss_dssp HHT---C--SEEECCSGGG
T ss_pred hcC---c--Ceeecccccc
Confidence 554 2 3467899995
No 47
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=95.44 E-value=0.0033 Score=57.07 Aligned_cols=66 Identities=18% Similarity=0.361 Sum_probs=41.0
Q ss_pred CCcceeccCcCC------------------HHHHHHHHHhcCCCCCCcEEE-ecccccCCCC-----cHHHHHHHHHhhh
Q 027543 43 SPVTVCGDIHGQ------------------FHDLMKLFQTGGHVPETNYIF-MGDFVDRGYN-----SLEVFTILLLLKA 98 (222)
Q Consensus 43 ~~i~viGDiHG~------------------~~~l~~ll~~~~~~~~~~~vf-lGD~vdrG~~-----s~evl~~l~~l~~ 98 (222)
.+|+.++|+||+ +..+..+++++.....+.+++ .||.++..+. ...+++.+..+.
T Consensus 7 l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~~~~~~g~~~~~~ln~lg- 85 (509)
T 3ive_A 7 VTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYISSLTKGKAIIDIMNTMP- 85 (509)
T ss_dssp EEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHTTTTHHHHHHHTTSC-
T ss_pred EEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchhhhhcCChHHHHHHHhcC-
Confidence 578999999986 445666666654434455666 8999984321 133444443332
Q ss_pred hCCCeEEEeCCCCch
Q 027543 99 RYPANITLLRGNHES 113 (222)
Q Consensus 99 ~~p~~v~~lrGNHE~ 113 (222)
+ -++..||||.
T Consensus 86 --~--D~~tlGNHEf 96 (509)
T 3ive_A 86 --F--DAVTIGNHEF 96 (509)
T ss_dssp --C--SEECCCGGGG
T ss_pred --C--cEEeeccccc
Confidence 2 3456799994
No 48
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=94.55 E-value=0.037 Score=45.69 Aligned_cols=65 Identities=12% Similarity=0.014 Sum_probs=45.6
Q ss_pred CCcceeccCcCC--HHHHHHHHHhcCCCCCCcEEE-ecccccCCCCcHHHHHHHHHhhhhCCCeEEEeCCCCch
Q 027543 43 SPVTVCGDIHGQ--FHDLMKLFQTGGHVPETNYIF-MGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHES 113 (222)
Q Consensus 43 ~~i~viGDiHG~--~~~l~~ll~~~~~~~~~~~vf-lGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~ 113 (222)
||+.++|||=|. ...+...++++.... +.+++ .||....-+.+.+....+..+.. .+. -.||||.
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~~~~~~~l~~~G~----D~~-T~GNHef 68 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAARGKGLDRRSYRLLREAGV----DLV-SLGNHAW 68 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCCHHHHHHHHHHTC----CEE-ECCTTTT
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcCHHHHHHHHhCCC----CEE-EeccEee
Confidence 588999999775 456777887776544 65666 46766544567788888877753 354 5699995
No 49
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=94.31 E-value=0.013 Score=50.49 Aligned_cols=67 Identities=22% Similarity=0.248 Sum_probs=40.4
Q ss_pred CCCcceeccCcCCH----------------HHHHHHHHhcCCC-CCCcEEEecccccCCCCcH-----------------
Q 027543 42 NSPVTVCGDIHGQF----------------HDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSL----------------- 87 (222)
Q Consensus 42 ~~~i~viGDiHG~~----------------~~l~~ll~~~~~~-~~~~~vflGD~vdrG~~s~----------------- 87 (222)
.-+|+.++|+||++ ..+..++++.... ++..++-.||.+...+.+-
T Consensus 11 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~qGs~~~~~~~~~~~~~g~~~g~~~ 90 (341)
T 3gve_A 11 HLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQGNPLGEYAVKYQKDDIISGTKTH 90 (341)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHHHHHHHHHHHTSSCC
T ss_pred EEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCCCcHHHHHhhhccccccccccccc
Confidence 45789999999985 4455565554332 3344455899996544221
Q ss_pred HHHHHHHHhhhhCCCeEEEeCCCCch
Q 027543 88 EVFTILLLLKARYPANITLLRGNHES 113 (222)
Q Consensus 88 evl~~l~~l~~~~p~~v~~lrGNHE~ 113 (222)
.+++.+..+. . -.+..||||.
T Consensus 91 ~~~~~ln~lg---~--Da~tlGNHEf 111 (341)
T 3gve_A 91 PIISVMNALK---Y--DAGTLGNHEF 111 (341)
T ss_dssp HHHHHHHHTT---C--CBEECCGGGG
T ss_pred HHHHHHHhhC---C--Ceeeccchhh
Confidence 2445554443 1 2356899995
No 50
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=94.16 E-value=0.056 Score=44.71 Aligned_cols=66 Identities=21% Similarity=0.024 Sum_probs=44.7
Q ss_pred CCcceeccCcCCH--HHHHHHHHhcCCCCCCcEEEecccccCC-CCcHHHHHHHHHhhhhCCCeEEEeCCCCchh
Q 027543 43 SPVTVCGDIHGQF--HDLMKLFQTGGHVPETNYIFMGDFVDRG-YNSLEVFTILLLLKARYPANITLLRGNHESR 114 (222)
Q Consensus 43 ~~i~viGDiHG~~--~~l~~ll~~~~~~~~~~~vflGD~vdrG-~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 114 (222)
||+.++|||=|.. ..+...++++.... +.+++.|+-.--| +.+......+..+.. .+. -.||||.-
T Consensus 1 m~ilf~GDv~g~~G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~~~~~~~l~~~G~----Da~-TlGNHefD 69 (255)
T 1t70_A 1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMHRDAARGALEAGA----GCL-TLGNHAWH 69 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCCHHHHHHHHHHTC----SEE-ECCTTTTS
T ss_pred CEEEEEeccCChHHHHHHHHHHHHHHhhC-CEEEECCCCccCCcCCCHHHHHHHHhCCC----CEE-Eecccccc
Confidence 5889999998765 56677777765444 6666655544434 567777777777653 344 45999964
No 51
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=94.03 E-value=0.015 Score=53.49 Aligned_cols=68 Identities=21% Similarity=0.130 Sum_probs=40.0
Q ss_pred CCCcceeccCcCCH----------------HHHHHHHHhcC--CCCCCcEEEecccccCCCC-------cHHHHHHHHHh
Q 027543 42 NSPVTVCGDIHGQF----------------HDLMKLFQTGG--HVPETNYIFMGDFVDRGYN-------SLEVFTILLLL 96 (222)
Q Consensus 42 ~~~i~viGDiHG~~----------------~~l~~ll~~~~--~~~~~~~vflGD~vdrG~~-------s~evl~~l~~l 96 (222)
..+|+.++|+||++ ..+...+++.. ..++..++..||.++..+. ...+++.+..+
T Consensus 15 ~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln~l 94 (557)
T 3c9f_A 15 DINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFIKQ 94 (557)
T ss_dssp SEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHTTS
T ss_pred EEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHHHhc
Confidence 46799999999973 23344444321 2233345668999975432 22345555444
Q ss_pred hhhCCCeEEEeCCCCchh
Q 027543 97 KARYPANITLLRGNHESR 114 (222)
Q Consensus 97 ~~~~p~~v~~lrGNHE~~ 114 (222)
. . -++..||||.-
T Consensus 95 g---~--Da~tlGNHEfD 107 (557)
T 3c9f_A 95 D---Y--DLLTIGNHELY 107 (557)
T ss_dssp C---C--SEECCCGGGSS
T ss_pred C---C--CEEeecchhcc
Confidence 3 2 34577999974
No 52
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=93.84 E-value=0.016 Score=49.95 Aligned_cols=43 Identities=12% Similarity=0.168 Sum_probs=27.8
Q ss_pred CCCcceeccCcCCH----------------HHHHHHHHhcCCC-CCCcEEEecccccCCC
Q 027543 42 NSPVTVCGDIHGQF----------------HDLMKLFQTGGHV-PETNYIFMGDFVDRGY 84 (222)
Q Consensus 42 ~~~i~viGDiHG~~----------------~~l~~ll~~~~~~-~~~~~vflGD~vdrG~ 84 (222)
.-+|+.++|+||++ ..+..+++++... ++..++-.||.+...+
T Consensus 8 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qGs~ 67 (339)
T 3jyf_A 8 DLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGSP 67 (339)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSSSH
T ss_pred eEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCCch
Confidence 35789999999975 3455566555432 3344555899996433
No 53
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=91.93 E-value=0.099 Score=47.40 Aligned_cols=65 Identities=22% Similarity=0.223 Sum_probs=41.1
Q ss_pred CcceeccCcCCH--------------------HHHHHHHHhcCC-CCCCcEEEecccccCCCC-----cHHHHHHHHHhh
Q 027543 44 PVTVCGDIHGQF--------------------HDLMKLFQTGGH-VPETNYIFMGDFVDRGYN-----SLEVFTILLLLK 97 (222)
Q Consensus 44 ~i~viGDiHG~~--------------------~~l~~ll~~~~~-~~~~~~vflGD~vdrG~~-----s~evl~~l~~l~ 97 (222)
+|+-+.|+||++ ..+..++++... .++..++-.||.+...+. ...+++.+-.+.
T Consensus 5 tILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~~~~~~g~~~i~~mN~lg 84 (530)
T 4h1s_A 5 TILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNALR 84 (530)
T ss_dssp EEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHTTHHHHHHHHHTT
T ss_pred EEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHHHHHhCChHHHHHHhccC
Confidence 467789999864 345555555432 234445558999986553 234566665554
Q ss_pred hhCCCeEEEeCCCCch
Q 027543 98 ARYPANITLLRGNHES 113 (222)
Q Consensus 98 ~~~p~~v~~lrGNHE~ 113 (222)
--.+..||||.
T Consensus 85 -----yDa~~lGNHEF 95 (530)
T 4h1s_A 85 -----YDAMALGNHEF 95 (530)
T ss_dssp -----CCEEECCGGGG
T ss_pred -----CCEEEEchhhh
Confidence 24578999996
No 54
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=89.18 E-value=0.5 Score=42.89 Aligned_cols=35 Identities=9% Similarity=0.174 Sum_probs=25.5
Q ss_pred CCcceeccCc---CCHHHHHHHHHhcCCCCCCcEEEeccccc
Q 027543 43 SPVTVCGDIH---GQFHDLMKLFQTGGHVPETNYIFMGDFVD 81 (222)
Q Consensus 43 ~~i~viGDiH---G~~~~l~~ll~~~~~~~~~~~vflGD~vd 81 (222)
.++.++||.+ |.+..+.++.+ .+.+-+|++||+|.
T Consensus 117 ~rfa~~sc~~~~~g~~~~~~~ia~----~~~D~vlhlGD~iY 154 (527)
T 2yeq_A 117 MTFAFASCQQYEHGYYTAYKHMAK----EKLDLVFHLGDYIY 154 (527)
T ss_dssp EEEEEECCCCGGGCCCHHHHHHTT----SCCSEEEECSCSSC
T ss_pred eEEEEEecCCCCCCccHHHHHHHh----cCCCEEEecCCccc
Confidence 4789999987 44555555433 45688999999993
No 55
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=83.15 E-value=0.47 Score=43.43 Aligned_cols=55 Identities=16% Similarity=0.044 Sum_probs=33.7
Q ss_pred CCHHHHHHHHHhcCCC-----CCCcEEEecccccCCCCc-----HHHHHHHHHhhhhCCCeEEEeCCCCch
Q 027543 53 GQFHDLMKLFQTGGHV-----PETNYIFMGDFVDRGYNS-----LEVFTILLLLKARYPANITLLRGNHES 113 (222)
Q Consensus 53 G~~~~l~~ll~~~~~~-----~~~~~vflGD~vdrG~~s-----~evl~~l~~l~~~~p~~v~~lrGNHE~ 113 (222)
|.+..+..+++++... ++..++..||+++..+.+ ..+++.+..+. + .+ +. ||||.
T Consensus 102 GG~arla~~v~~~r~~~~~~gpd~Lll~~GD~~~gs~~~~~~~g~~~~~~ln~lg--~--d~-~~-GNHEf 166 (562)
T 2wdc_A 102 GGMGALTALIRDQKARVEAEGGKALVLDGGDTWTNSGLSLLTRGEAVVRWQNLVG--V--DH-MV-SHWEW 166 (562)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCCEEEEECSCCSSSSHHHHHHTTHHHHHHHHHHT--C--CE-EC-CSGGG
T ss_pred CCHHHHHHHHHHHHhhhhcCCCCEEEEeCCCCCCcchhhhhhCCHHHHHHHHhhC--C--cE-Ee-cchhc
Confidence 3445566666655432 334666799999976532 34566666664 2 24 46 99996
No 56
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=63.50 E-value=20 Score=31.93 Aligned_cols=61 Identities=21% Similarity=0.336 Sum_probs=40.5
Q ss_pred CHHHHHHHHHhcCCC-CCCcEEEecccccCCC------------------CcH-HHHHHHHH--hhhhCC-CeEEEeCCC
Q 027543 54 QFHDLMKLFQTGGHV-PETNYIFMGDFVDRGY------------------NSL-EVFTILLL--LKARYP-ANITLLRGN 110 (222)
Q Consensus 54 ~~~~l~~ll~~~~~~-~~~~~vflGD~vdrG~------------------~s~-evl~~l~~--l~~~~p-~~v~~lrGN 110 (222)
.|+-|.++++.+... +.+.+|++|.+||.-. .+. ++.+.+.. +....+ -+++++.|+
T Consensus 164 ~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~~~lF~~~i~~il~~l~~~t~VVlVPS~ 243 (460)
T 3flo_A 164 SLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKLFTPILKTISPHIQTVLIPST 243 (460)
T ss_dssp CCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHHHHHHTHHHHTTSCTTSEEEEECCT
T ss_pred ChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccCHHHHHHHHHHHHHHhccCCCEEEEeCCc
Confidence 578899999998764 5788999999998752 122 23332211 111112 369999999
Q ss_pred Cchh
Q 027543 111 HESR 114 (222)
Q Consensus 111 HE~~ 114 (222)
||..
T Consensus 244 rD~~ 247 (460)
T 3flo_A 244 KDAI 247 (460)
T ss_dssp TBTT
T ss_pred cccc
Confidence 9985
No 57
>1zav_U 50S ribosomal protein L7/L12; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: a.108.1.1 PDB: 1zaw_U 1zax_U 1dd3_C
Probab=57.53 E-value=5.4 Score=21.50 Aligned_cols=27 Identities=22% Similarity=0.096 Sum_probs=21.6
Q ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHH
Q 027543 1 MDLDQWIAKVKEGQHLLEDELQLLCEY 27 (222)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ 27 (222)
++.+++++.+++-+.+...++.+.+++
T Consensus 1 ~~~~~iie~i~~lTvlEl~eLvk~lEe 27 (30)
T 1zav_U 1 MTIDEIIEAIEKLTVSELAELVKKLED 27 (30)
T ss_dssp CCHHHHHHHHHHSBHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 467899999998888877777776665
No 58
>1dd4_C 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix- bundle, five-helix- bundle, alpha-beta structure; HET: TBR; 2.40A {Thermotoga maritima} SCOP: a.108.1.1
Probab=53.70 E-value=5.2 Score=23.10 Aligned_cols=27 Identities=22% Similarity=0.096 Sum_probs=19.6
Q ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHH
Q 027543 1 MDLDQWIAKVKEGQHLLEDELQLLCEY 27 (222)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ 27 (222)
|+++++++.+++-+.+...|+.+.+++
T Consensus 1 ~~~~~iie~i~~lTvlE~~eLvk~lee 27 (40)
T 1dd4_C 1 MTIDEIIEAIEKLTVSELAELVKKLED 27 (40)
T ss_dssp CHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 457889999998777766666666554
No 59
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=32.66 E-value=33 Score=30.59 Aligned_cols=73 Identities=15% Similarity=0.254 Sum_probs=40.9
Q ss_pred cCCCcceeccCcC--C----HHHHHHHHHhc-CCC----------CCCcEEEecccccCCCC------------------
Q 027543 41 VNSPVTVCGDIHG--Q----FHDLMKLFQTG-GHV----------PETNYIFMGDFVDRGYN------------------ 85 (222)
Q Consensus 41 ~~~~i~viGDiHG--~----~~~l~~ll~~~-~~~----------~~~~~vflGD~vdrG~~------------------ 85 (222)
.+..+++|||||= . ...+..+.+-+ |.. .-.++|+.||.|+.-.+
T Consensus 199 ~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~~ 278 (476)
T 3e0j_A 199 TDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQAA 278 (476)
T ss_dssp SCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHHH
T ss_pred CCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccchh
Confidence 3467999999993 2 22233333322 221 13689999999986322
Q ss_pred ---cHHH-HHHHHHhhhhCCCeEEEeCCCCchhh
Q 027543 86 ---SLEV-FTILLLLKARYPANITLLRGNHESRQ 115 (222)
Q Consensus 86 ---s~ev-l~~l~~l~~~~p~~v~~lrGNHE~~~ 115 (222)
+.+. =.+|.++...- .|.+++||||...
T Consensus 279 ~~~~~~~ld~~L~~l~~~i--~V~lmPG~~DP~~ 310 (476)
T 3e0j_A 279 SVEAVKMLDEILLQLSASV--PVDVMPGEFDPTN 310 (476)
T ss_dssp HHHHHHHHHHHHHHHHTTS--CEEEECCTTSSSC
T ss_pred hHHHHHHHHHHHHhcccCc--eEEecCCCCCccc
Confidence 1122 22333333222 4999999999754
No 60
>2cyc_A Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacylation, structural genomics; HET: TYR; 2.20A {Pyrococcus horikoshii}
Probab=30.73 E-value=39 Score=29.01 Aligned_cols=69 Identities=20% Similarity=0.180 Sum_probs=39.8
Q ss_pred CHHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHhhCCCccccCCCcceeccCc-CC-HHHHHHHHHhcCCCCCCcEEEe
Q 027543 2 DLDQWIAKVKEG---QHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIH-GQ-FHDLMKLFQTGGHVPETNYIFM 76 (222)
Q Consensus 2 ~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDiH-G~-~~~l~~ll~~~~~~~~~~~vfl 76 (222)
+++.-++...++ +.++++++.++++. .+.+.++.--.|. |.+| |+ +-.+..+.+... ...+.++++
T Consensus 2 ~~~~~~~l~~r~~~~e~~~~~~l~~~l~~-----~~~~~vy~G~~PT---g~lHlG~yl~~l~~~~~lQ~-~G~~~~~~i 72 (375)
T 2cyc_A 2 DIEERINLVLKKPTEEVLTVENLRHLFEI-----GAPLQHYIGFEIS---GYIHLGTGLMAGAKIADFQK-AGIKTRVFL 72 (375)
T ss_dssp CHHHHHHHHHSTTEEEEETHHHHHHHHHH-----TCCCBEEEEECCC---SCCBHHHHHHHHHHHHHHHH-TTCBCEEEE
T ss_pred CHHHHHHHHhcCCceeecCHHHHHHHHhc-----CCCcEEEeCCCCC---CCcCchHHHHHHHHHHHHHH-CCCcEEEEe
Confidence 555555666666 67787777777743 1233444333444 5788 67 555544433221 235678899
Q ss_pred ccc
Q 027543 77 GDF 79 (222)
Q Consensus 77 GD~ 79 (222)
||+
T Consensus 73 aD~ 75 (375)
T 2cyc_A 73 ADW 75 (375)
T ss_dssp CHH
T ss_pred cCc
Confidence 993
No 61
>1n3l_A Tyrosyl-tRNA synthetase; rossmann fold AS catalytic domain, unique anticodon recognit domain, dimer, ligase; 1.18A {Homo sapiens} SCOP: c.26.1.1 PDB: 1q11_A*
Probab=29.16 E-value=47 Score=28.42 Aligned_cols=67 Identities=15% Similarity=0.114 Sum_probs=38.5
Q ss_pred CHHHHHHHHhcCC--CCCHHHHHHHHHHHHHHHhhCCCccccCCCcceeccCc-CCHHHHHHHHHhcCCCCCCcEEEecc
Q 027543 2 DLDQWIAKVKEGQ--HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIH-GQFHDLMKLFQTGGHVPETNYIFMGD 78 (222)
Q Consensus 2 ~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDiH-G~~~~l~~ll~~~~~~~~~~~vflGD 78 (222)
+++.-++-+.++- .++++++.++++. +.+.++.--.|. |++| |++-.+..+..... ...+.++++||
T Consensus 6 ~~~~~~~l~~Rg~~e~~~~~~L~~~L~~------~~~~vy~G~~PT---G~lHlG~~~~~l~~~~~~q-~g~~~i~~I~D 75 (372)
T 1n3l_A 6 SPEEKLHLITRNLQEVLGEEKLKEILKE------RELKIYWGTATT---GKPHVAYFVPMSKIADFLK-AGCEVTILFAD 75 (372)
T ss_dssp CHHHHHHHHHTTCSEEECHHHHHHHHTT------SCCEEEEEECCS---SCCBGGGHHHHHHHHHHHH-TTCEEEEEECH
T ss_pred CHHHHHHHHHcCCeeecCHHHHHHHHhc------CCCEEEeCcCCC---CcccHHHHHHHHHHHHHHH-CCCCEEEEEcC
Confidence 4455455555553 4677777777753 334444333443 7888 88766554333222 23457888999
No 62
>2dlc_X Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligase-tRNA complex; HET: 2MG OMG M2G PSU 6IA 5MC 5MU 1MA YMP; 2.40A {Saccharomyces cerevisiae}
Probab=27.53 E-value=56 Score=28.19 Aligned_cols=55 Identities=18% Similarity=0.149 Sum_probs=31.6
Q ss_pred CCCHHHHHHHHHHHHHHHhhCC-CccccCCCcceeccCc-CCHHHHHHHHHhcCCCCCCcEEEecc
Q 027543 15 HLLEDELQLLCEYVKEILIEES-NVQPVNSPVTVCGDIH-GQFHDLMKLFQTGGHVPETNYIFMGD 78 (222)
Q Consensus 15 ~~~~~~~~~l~~~~~~~~~~e~-~~~~~~~~i~viGDiH-G~~~~l~~ll~~~~~~~~~~~vflGD 78 (222)
.++++++.+++++ ..+| .++.--.| .|++| |++-.+........ .....++++||
T Consensus 23 ~~~~e~L~~~L~~-----~~~p~~vy~G~~P---TG~LHlG~~~~al~~~~~~q-~g~~~ii~I~D 79 (394)
T 2dlc_X 23 VLNPQIIKDVLEV-----QKRHLKLYWGTAP---TGRPHCGYFVPMTKLADFLK-AGCEVTVLLAD 79 (394)
T ss_dssp EECHHHHHHHHHT-----SCSCCEEEEEECC---CSCCBGGGHHHHHHHHHHHH-TTCEEEEEECH
T ss_pred ecCHHHHHHHHHc-----cCCCeEEEEEeCC---CCCccHHHHHHHHHHHHHHH-cCCcEEEEEcC
Confidence 3556666666543 3456 44444455 57999 78765544333222 23456888999
No 63
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=25.94 E-value=40 Score=27.36 Aligned_cols=35 Identities=23% Similarity=0.366 Sum_probs=24.4
Q ss_pred cEEEecccccCCCCcHHHHHHHHHhhhhCCCeEEEeCC
Q 027543 72 NYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRG 109 (222)
Q Consensus 72 ~~vflGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrG 109 (222)
+++|+||+|.|-. -..+-.+|.+++..+ +++++-|
T Consensus 2 ~ilfiGDi~g~~G-~~~v~~~l~~lr~~~--d~vi~ng 36 (252)
T 2z06_A 2 RVLFIGDVMAEPG-LRAVGLHLPDIRDRY--DLVIANG 36 (252)
T ss_dssp EEEEECCBCHHHH-HHHHHHHHHHHGGGC--SEEEEEC
T ss_pred EEEEEEecCCccc-HHHHHHHHHHHHhhC--CEEEEeC
Confidence 6899999998732 335677888888776 4544443
No 64
>1h3o_A Transcription initiation factor TFIID 135 kDa subunit; transcription/TBP-associated factors, TBP-associated factors; 2.3A {Homo sapiens} SCOP: a.22.1.3
Probab=24.93 E-value=31 Score=22.68 Aligned_cols=37 Identities=19% Similarity=0.197 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHHHhhCCCccccCCCcceeccCcCCH
Q 027543 19 DELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQF 55 (222)
Q Consensus 19 ~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDiHG~~ 55 (222)
+-+..|+++...+-.+....+..+.+..+.+|+.+++
T Consensus 38 eRLr~llekl~~~a~~R~~~~K~d~ry~~tsDvR~QL 74 (75)
T 1h3o_A 38 QRLQNLVEKISETAQQKNFSYKDDDRYEQASDVRAQL 74 (75)
T ss_dssp HHHHHHHHHHHC-------------------------
T ss_pred HHHHHHHHHHHHHHHhhhhhhcCCCCeEeeccHHhhc
Confidence 3444555555555555555666678899999998874
No 65
>4h8e_A Undecaprenyl pyrophosphate synthase; alpha-helix, prenyl transferase, cell WALL biosynthesis, FAR diphosphate binding; HET: FPP; 1.30A {Staphylococcus aureus subsp}
Probab=23.94 E-value=36 Score=27.78 Aligned_cols=77 Identities=13% Similarity=0.100 Sum_probs=47.7
Q ss_pred CCHHHHHHHHHHHHHHHhhC-CCccccCCCcceeccCcCCHHHHHHHHHhcC----CCCCCcEEEecccccCCCCcHHHH
Q 027543 16 LLEDELQLLCEYVKEILIEE-SNVQPVNSPVTVCGDIHGQFHDLMKLFQTGG----HVPETNYIFMGDFVDRGYNSLEVF 90 (222)
Q Consensus 16 ~~~~~~~~l~~~~~~~~~~e-~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~----~~~~~~~vflGD~vdrG~~s~evl 90 (222)
=|++|+..|..-..+.+.++ +.+.....++-+|||+..=-..+.+.++... ....-.+.+.=.|-.| -|++
T Consensus 84 Rp~~EV~~Lm~L~~~~l~~~~~~l~~~~vrvr~iGd~~~Lp~~~~~~i~~ae~~T~~n~~~~lnia~~YggR----~EI~ 159 (256)
T 4h8e_A 84 RPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTANNTGLKLIFAINYGGR----AELV 159 (256)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEESCGGGSCHHHHHHHHHHHHHTTTCCSCEEEEEEEECHH----HHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEecCcccCCHHHHHHHHHHHHHhcCCCCeEEEEEeCCCCH----HHHH
Confidence 46788888888887777766 3455567899999999876666655554432 2222344555555333 3455
Q ss_pred HHHHHh
Q 027543 91 TILLLL 96 (222)
Q Consensus 91 ~~l~~l 96 (222)
.-+.++
T Consensus 160 ~Avr~i 165 (256)
T 4h8e_A 160 HSIKNM 165 (256)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555444
No 66
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=23.85 E-value=79 Score=25.30 Aligned_cols=32 Identities=16% Similarity=0.168 Sum_probs=26.1
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhC
Q 027543 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEE 35 (222)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e 35 (222)
||+++++.+ +++|+++++..||.++.+-|++.
T Consensus 34 SL~eIL~~~--~~PlsEEqaWALc~Qc~~~L~~~ 65 (229)
T 2yle_A 34 SLEEILRLY--NQPINEEQAWAVCYQCCGSLRAA 65 (229)
T ss_dssp EHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHc--CCCcCHHHHHHHHHHHHHHHHhh
Confidence 566666554 69999999999999999888765
No 67
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=23.40 E-value=21 Score=29.57 Aligned_cols=38 Identities=24% Similarity=0.480 Sum_probs=25.0
Q ss_pred CcEEEecccccCCCCcHHHHHHHHHhhhhCCCeEEEeCC
Q 027543 71 TNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRG 109 (222)
Q Consensus 71 ~~~vflGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrG 109 (222)
-+++|+||++.+ +.-..+-..|.+++..++.+++++-|
T Consensus 5 m~ilf~GDv~G~-~G~~~l~~~l~~lr~~~~~d~vi~Ng 42 (281)
T 1t71_A 5 IKFIFLGDVYGK-AGRNIIKNNLAQLKSKYQADLVIVNA 42 (281)
T ss_dssp CEEEEECEEBHH-HHHHHHHTTHHHHHHHHTCSEEEEEC
T ss_pred EEEEEECCcCCh-HHHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 479999999977 32234566777777765435555554
No 68
>2j5b_A Tyrosyl-tRNA synthetase; ligase, protein biosynthesis, ATP-binding; HET: TYE; 2.20A {Acanthamoeba polyphaga mimivirus}
Probab=23.20 E-value=33 Score=29.17 Aligned_cols=58 Identities=19% Similarity=0.162 Sum_probs=33.0
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCccccCCCcceeccCc-CC-HHHHHHHHHhcCCCCCCcEEEecccc
Q 027543 14 QHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIH-GQ-FHDLMKLFQTGGHVPETNYIFMGDFV 80 (222)
Q Consensus 14 ~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDiH-G~-~~~l~~ll~~~~~~~~~~~vflGD~v 80 (222)
+.++++++.++++. .+.+.++.--.|. |++| |+ +-.+..+..... .....++++||+-
T Consensus 24 e~~~~~~L~~~L~~-----~~~~~vy~G~~PT---g~lHlGhyl~~l~~~~~lQ~-~G~~~~~~i~D~~ 83 (348)
T 2j5b_A 24 ECETLDRLKQLVDS-----GRIFTAYNGFEPS---GRIHIAQALITVMNTNNMIE-CGGQMIIYIADWF 83 (348)
T ss_dssp EESCHHHHHHHHHH-----TCCEEEEEEECCC---SSCBHHHHHHHHHHHHHHHH-TTEEEEEEECHHH
T ss_pred cccCHHHHHHHHhc-----CCCCEEEeccCCC---CCCchhHHHHHHHHHHHHHH-cCCcEEEEeccch
Confidence 35677888887765 2333444444555 7888 66 345544333221 1245688899943
No 69
>2lnb_A Z-DNA-binding protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, immune system; NMR {Homo sapiens}
Probab=22.98 E-value=1.2e+02 Score=20.00 Aligned_cols=45 Identities=13% Similarity=0.042 Sum_probs=33.3
Q ss_pred HHHHHh-cCCCCCHHHHHHH-------HHHHHHHHhhCCCccccCCCcceecc
Q 027543 6 WIAKVK-EGQHLLEDELQLL-------CEYVKEILIEESNVQPVNSPVTVCGD 50 (222)
Q Consensus 6 ~~~~~~-~~~~~~~~~~~~l-------~~~~~~~~~~e~~~~~~~~~i~viGD 50 (222)
+++.++ .++++..-++.+. +++|...|++|-.+.....-.+.+|+
T Consensus 24 VLe~LkeaG~PlkageIae~~GvdKKeVdKaik~LKkEgkI~SPkRCyw~~~~ 76 (80)
T 2lnb_A 24 ILQVLTEAGSPVKLAQLVKECQAPKRELNQVLYRMKKELKVSLTSPATWCLGG 76 (80)
T ss_dssp HHHHHHHHTSCEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEETTEEEESS
T ss_pred HHHHHHHcCCCCCHHHHHHHHCCCHHHHHHHHHHHHHcCCccCCCCceeeCCC
Confidence 444444 4788888888865 67788889999988777666777775
No 70
>2o97_B NS1, HU-1, DNA-binding protein HU-beta; heterodimer, DNA structure, DNA supercoiling, E DNA binding protein; 2.45A {Escherichia coli} SCOP: a.55.1.1
Probab=22.73 E-value=1.4e+02 Score=19.60 Aligned_cols=33 Identities=15% Similarity=0.191 Sum_probs=24.6
Q ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHh
Q 027543 1 MDLDQWIAKVKEGQHLLEDELQLLCEYVKEILI 33 (222)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 33 (222)
|+-.++++.+....-++..++..+++...+.+.
T Consensus 1 m~k~eli~~ia~~~~ls~~~~~~~l~~~~~~i~ 33 (90)
T 2o97_B 1 MNKSQLIDKIAAGADISKAAAGRALDAIIASVT 33 (90)
T ss_dssp CBHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 455788888888888898888888777666554
No 71
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=22.57 E-value=1.3e+02 Score=21.13 Aligned_cols=99 Identities=16% Similarity=0.079 Sum_probs=53.4
Q ss_pred HHHHHHHh-cCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCc------c--eeccCcCCHHHHHHHHHhcCCCCCCcEE
Q 027543 4 DQWIAKVK-EGQHLLEDELQLLCEYVKEILIEESNVQPVNSPV------T--VCGDIHGQFHDLMKLFQTGGHVPETNYI 74 (222)
Q Consensus 4 ~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i------~--viGDiHG~~~~l~~ll~~~~~~~~~~~v 74 (222)
.++++... ....++++++.++++. ..+..++++..+- - +=|-+|=-+..+.......+..++..+|
T Consensus 12 ~~l~~~~~~~~~~is~~el~~~l~~-----~~~~~liDVR~~~E~~~~gh~~IpgAinip~~~l~~~~~~~~l~~~~~iv 86 (137)
T 1qxn_A 12 KAQVKAAKADMVMLSPKDAYKLLQE-----NPDITLIDVRDPDELKAMGKPDVKNYKHMSRGKLEPLLAKSGLDPEKPVV 86 (137)
T ss_dssp HHHHHHHHHSSEEECHHHHHHHHHH-----CTTSEEEECCCHHHHHHTCEECCSSEEECCTTTSHHHHHHHCCCTTSCEE
T ss_pred HHHHHHhhccCcccCHHHHHHHHhc-----CCCeEEEECCCHHHHHhcCCcCCCCCEEcchHHhhhHHhhccCCCCCeEE
Confidence 34444443 3567889998888763 1234455554321 1 2333443444443311112334455566
Q ss_pred EecccccCCCCcHHHHHHHHHhhhhCCCeEEEeCCCCch
Q 027543 75 FMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHES 113 (222)
Q Consensus 75 flGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~ 113 (222)
+ |+..|..|..+...|.++-. .+++.+.|--..
T Consensus 87 v---yC~~G~rS~~aa~~L~~~G~---~~v~~l~GG~~~ 119 (137)
T 1qxn_A 87 V---FCKTAARAALAGKTLREYGF---KTIYNSEGGMDK 119 (137)
T ss_dssp E---ECCSSSCHHHHHHHHHHHTC---SCEEEESSCHHH
T ss_pred E---EcCCCcHHHHHHHHHHHcCC---cceEEEcCcHHH
Confidence 5 34567788887777766542 268888886444
No 72
>1mul_A NS2, HU-2, DNA binding protein HU-alpha; histone-like; HET: DNA; 2.30A {Escherichia coli} SCOP: a.55.1.1 PDB: 2o97_A
Probab=22.55 E-value=1.2e+02 Score=19.86 Aligned_cols=33 Identities=18% Similarity=0.164 Sum_probs=25.1
Q ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHh
Q 027543 1 MDLDQWIAKVKEGQHLLEDELQLLCEYVKEILI 33 (222)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 33 (222)
|+-.++++.+....-++..++..+++...+.+.
T Consensus 1 m~k~eli~~ia~~~~ls~~~~~~~l~~~~~~i~ 33 (90)
T 1mul_A 1 MNKTQLIDVIAEKAELSKTQAKAALESTLAAIT 33 (90)
T ss_dssp CCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 456788888887778898888887777666554
No 73
>3ugs_B Undecaprenyl pyrophosphate synthase; niaid, csgid, structural genomics, center for structural GEN infectious diseases; HET: FFT; 2.46A {Campylobacter jejuni} SCOP: c.101.1.0
Probab=22.37 E-value=44 Score=26.71 Aligned_cols=76 Identities=14% Similarity=0.125 Sum_probs=47.4
Q ss_pred CHHHHHHHHHHHHHHHhhCCC-ccccCCCcceeccCcCCHHHHHHHHHhcC----CCCCCcEEEecccccCCCCcHHHHH
Q 027543 17 LEDELQLLCEYVKEILIEESN-VQPVNSPVTVCGDIHGQFHDLMKLFQTGG----HVPETNYIFMGDFVDRGYNSLEVFT 91 (222)
Q Consensus 17 ~~~~~~~l~~~~~~~~~~e~~-~~~~~~~i~viGDiHG~~~~l~~ll~~~~----~~~~~~~vflGD~vdrG~~s~evl~ 91 (222)
|++|+..|.+-..+.+.++.. +..-..++-+|||+..=-..+.+.++... ....-.+.+.=.|-.| -|++.
T Consensus 67 p~~EV~~Lm~L~~~~l~~~~~~l~~~~vrvr~iGd~~~Lp~~~~~~i~~ae~~T~~n~~~~lnia~~YggR----~EI~~ 142 (225)
T 3ugs_B 67 PKDEIDFIFELLDRCLDEALEKFEKNNVRLRAIGDLSRLEDKVREKITLVEEKTKHCDALCVNLAISYGAR----DEIIR 142 (225)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSTTTTEEEEEESCGGGSCHHHHHHHHHHHHHHTTCCSEEEEEEEEECHH----HHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEEEeChHhCCHHHHHHHHHHHHHhcCCCCcEEEEeeCCCCH----HHHHH
Confidence 688998888888888876533 33445789999999876666666554432 1222344445555332 35666
Q ss_pred HHHHh
Q 027543 92 ILLLL 96 (222)
Q Consensus 92 ~l~~l 96 (222)
-+.++
T Consensus 143 A~~~i 147 (225)
T 3ugs_B 143 AAKRV 147 (225)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66555
No 74
>4h62_V Mediator of RNA polymerase II transcription subun; mediator complex, nucleus; HET: MES; 3.00A {Saccharomyces cerevisiae}
Probab=20.68 E-value=1e+02 Score=15.91 Aligned_cols=24 Identities=17% Similarity=0.281 Sum_probs=17.3
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCC
Q 027543 14 QHLLEDELQLLCEYVKEILIEESN 37 (222)
Q Consensus 14 ~~~~~~~~~~l~~~~~~~~~~e~~ 37 (222)
.++.++++.+|++...+-+-.|.+
T Consensus 7 trfdekqieelldncietfvaekt 30 (31)
T 4h62_V 7 TRFDEKQIEELLDNCIETFVAEKT 30 (31)
T ss_dssp ---CHHHHHHHHHHHHHHHHTCCC
T ss_pred ccccHHHHHHHHHHHHHHHHhhcc
Confidence 467889999999998888776653
No 75
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=20.39 E-value=1.2e+02 Score=19.12 Aligned_cols=53 Identities=15% Similarity=0.128 Sum_probs=29.4
Q ss_pred ccCcCCHHHHHHHHHhcCCCCCCcEEEecccccCCCCcHHHHHHHHHhhhhCCCeEEEe
Q 027543 49 GDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLL 107 (222)
Q Consensus 49 GDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~l~~~~p~~v~~l 107 (222)
|-+|=.++.+...+..++..++..+|+.. ..|..|..+...|.++- + .+++.+
T Consensus 20 gA~~ip~~~l~~~~~~l~~~~~~~ivv~C---~~g~rs~~aa~~L~~~G--~-~~v~~l 72 (85)
T 2jtq_A 20 GAINIPLKEVKERIATAVPDKNDTVKVYC---NAGRQSGQAKEILSEMG--Y-THVENA 72 (85)
T ss_dssp TCEECCHHHHHHHHHHHCCCTTSEEEEEE---SSSHHHHHHHHHHHHTT--C-SSEEEE
T ss_pred CCEEcCHHHHHHHHHHhCCCCCCcEEEEc---CCCchHHHHHHHHHHcC--C-CCEEec
Confidence 33444556666666666555555555543 34666666666665543 2 256666
Done!