BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027550
(222 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 180 bits (456), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/196 (48%), Positives = 126/196 (64%), Gaps = 35/196 (17%)
Query: 62 VGDLARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDR 121
+GD LA ++ FSV+E+EAL EL+K +S ++I DGLI+KEE Q+ALF+ E+LF DR
Sbjct: 30 LGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADR 89
Query: 122 VV-----------------------------------AFRLYDLRQTGYIEREEVKQMVA 146
V +F+LYDL+Q G+IER+EVKQMV
Sbjct: 90 VFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVV 149
Query: 147 AILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSLLKNMTLPYLTD 206
A L ES + L D ++E IIDKTF +AD DG+I+KEEW+ +R+PSLLKNMTL YL D
Sbjct: 150 ATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTLQYLKD 209
Query: 207 ITTIFPSFVFNTEVED 222
ITT FPSFVF+++VED
Sbjct: 210 ITTTFPSFVFHSQVED 225
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 171 bits (432), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 118/185 (63%), Gaps = 35/185 (18%)
Query: 68 LAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVV---- 123
LA ++ FSV+E+EAL EL+K +S ++I DGLI+KEE Q+ALF+ E+LF DRV
Sbjct: 5 LARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFD 64
Query: 124 -------------------------------AFRLYDLRQTGYIEREEVKQMVAAILMES 152
+F+LYDL+Q G+IER+EVKQMV A L ES
Sbjct: 65 TKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAES 124
Query: 153 EIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSLLKNMTLPYLTDITTIFP 212
+ L D ++E IIDKTF +AD DG+I+KEEW+ +R+PSLLKNMTL YL DITT FP
Sbjct: 125 GMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTLQYLKDITTTFP 184
Query: 213 SFVFN 217
SFVF+
Sbjct: 185 SFVFH 189
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 169 bits (427), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 118/190 (62%), Gaps = 35/190 (18%)
Query: 68 LAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVV---- 123
LA+ + F+V E+EAL EL+K LS SII DGLIHKEE Q+ALF+ NLF DR+
Sbjct: 25 LASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRIFDVFD 84
Query: 124 -------------------------------AFRLYDLRQTGYIEREEVKQMVAAILMES 152
AF+LYDLRQTG+IEREE+K+MV A+L ES
Sbjct: 85 VKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHES 144
Query: 153 EIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSLLKNMTLPYLTDITTIFP 212
E+ L +D++E ++DK F AD DG+I+ +EWK+F NPSL+KNMTLPYL DI FP
Sbjct: 145 ELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIKNMTLPYLKDINRTFP 204
Query: 213 SFVFNTEVED 222
SFV + E E+
Sbjct: 205 SFVSSCEEEE 214
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 167 bits (423), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 114/183 (62%), Gaps = 35/183 (19%)
Query: 68 LAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVV---- 123
LA+ + F+V E+EAL EL+K LS SII DGLIHKEE Q+ALF+ NLF DR+
Sbjct: 25 LASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRIFDVFD 84
Query: 124 -------------------------------AFRLYDLRQTGYIEREEVKQMVAAILMES 152
AF+LYDLRQTG+IEREE+K+MV A+L ES
Sbjct: 85 VKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHES 144
Query: 153 EIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSLLKNMTLPYLTDITTIFP 212
E+ L +D++E ++DK F AD DG+I+ +EWK+F NPSL+KNMTLPYL DI FP
Sbjct: 145 ELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIKNMTLPYLKDINRTFP 204
Query: 213 SFV 215
SFV
Sbjct: 205 SFV 207
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 66/112 (58%), Gaps = 7/112 (6%)
Query: 95 KDGLIHKEELQVALFQAPYGENLFLDRVV-AFRLYDLRQTGYIEREEVKQMVAAI--LME 151
K+G I +E AL GE D+++ AF+LYDL G I +E+ ++V AI ++
Sbjct: 76 KNGYIDFKEFICALSVTSRGE--LNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVG 133
Query: 152 SEIKLPDD--LLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSLLKNMTL 201
S +KLP+D E ++K F D +KDG++ EE+ E + R+P+++ ++L
Sbjct: 134 SMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDPTIVSALSL 185
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 9/113 (7%)
Query: 95 KDGLIHKEELQVALFQAPYGENLFLDRVV--AFRLYDLRQTGYIEREEVKQMVAAI--LM 150
KDG I E AL G LD + AF+LYDL GYI R E+ +V AI ++
Sbjct: 76 KDGRIEFSEFIQALSVTSRGT---LDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMV 132
Query: 151 ESEIKLP--DDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSLLKNMTL 201
+ ++LP ++ E +D+ FA D + DG++ +E++E + +PS+++ ++L
Sbjct: 133 GNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIVQALSL 185
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR+YD+ + GYI E+ Q++ ++ + L D L+ I+DKT +AD D DGRI+ E
Sbjct: 95 AFRIYDMDKDGYISNGELFQVLKMMVGNN---LKDTQLQQIVDKTIINADKDGDGRISFE 151
Query: 184 EW 185
E+
Sbjct: 152 EF 153
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR+YD+ + GYI E+ Q++ ++ + L D L+ I+DKT +AD D DGRI+ E
Sbjct: 94 AFRIYDMDKDGYISNGELFQVLKMMVGNN---LKDTQLQQIVDKTIINADKDGDGRISFE 150
Query: 184 EW 185
E+
Sbjct: 151 EF 152
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR+YD+ + GYI E+ Q++ ++ + L D L+ I+DKT +AD D DGRI+ E
Sbjct: 81 AFRIYDMDKDGYISNGELFQVLKMMVGNN---LKDTQLQQIVDKTIINADKDGDGRISFE 137
Query: 184 EW 185
E+
Sbjct: 138 EF 139
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR+YD+ + GYI E+ Q++ ++ + L D L+ I+DKT +AD D DGRI+ E
Sbjct: 80 AFRIYDMDKDGYISNGELFQVLKMMVGNN---LKDTQLQQIVDKTIINADKDGDGRISFE 136
Query: 184 EW 185
E+
Sbjct: 137 EF 138
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 96 DGLIHKEELQVALFQAPYGENLFLDRVVAFRLYDLRQTGYIEREEVKQMVAAI--LMESE 153
DG I E +AL G+ L AF +YDL GYI + E+ ++V AI ++ S
Sbjct: 77 DGTIDFREFIIALSVTSRGK-LEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSV 135
Query: 154 IKLPDD--LLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSLLK 197
+K+P+D E +K F D ++DG+++ EE+ A +PS+++
Sbjct: 136 MKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVR 181
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESE-IKLPDDLLEAIIDKTFADADIDKDGRINK 182
AFR++D G + RE++ ++V + E E +L ++ +ID ++DID+DG IN
Sbjct: 134 AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINL 193
Query: 183 EEWKEFAVRNP 193
E++ R+P
Sbjct: 194 SEFQHVISRSP 204
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESE-IKLPDDLLEAIIDKTFADADIDKDGRINK 182
AFR++D G + RE++ ++V + E E +L ++ +ID ++DID+DG IN
Sbjct: 103 AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINL 162
Query: 183 EEWKEFAVRNP 193
E++ R+P
Sbjct: 163 SEFQHVISRSP 173
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 96 DGLIHKEELQVALFQAPYGENLFLDRVVAFRLYDLRQTGYIEREEVKQMVAAI--LMESE 153
+G IH EE L G L AF LYDL GYI +E+ +VA++ +M S
Sbjct: 77 NGFIHFEEFITVLSTTSRG-TLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSM 135
Query: 154 IKLPDD--LLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSLLKNMTL 201
+ L +D E + K F D ++DG I +E++E + +PS++ + L
Sbjct: 136 VTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSIIGALNL 185
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 65 LARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQA-PYGENLFLDRVV 123
L +L A++ F+ EL+ L +KN S G++++E + Q P+G+ +
Sbjct: 39 LEQLEAQTNFTKRELQVLYRGFKNECPS----GVVNEETFKQIYAQFFPHGDASTYAHYL 94
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
F +D QTG ++ E+ ++ +L + + + TF DI+KDG INKE
Sbjct: 95 -FNAFDTTQTGSVKFEDFVTALSILLRGT--------VHEKLRWTFNLYDINKDGYINKE 145
Query: 184 EWKEFAVRNPSLLKNMTLPYLTDIT 208
E + ++ T P L + T
Sbjct: 146 EMMDIVKAIYDMMGKYTYPVLKEDT 170
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAIL-MESEIKLP---DDLLEAIIDKTFADADIDKDGR 179
F LYD+ + GYI +EE+ +V AI M + P +D +D F D +KDG
Sbjct: 130 TFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGI 189
Query: 180 INKEEWKEFAVRNPSLLKNMTL 201
+ +E+ E + ++++++ L
Sbjct: 190 VTLDEFLESCQEDDNIMRSLQL 211
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 65 LARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQA-PYGENLFLDRVV 123
L +L A++ F+ EL+ L +KN S G++++E + Q P+G+ +
Sbjct: 6 LEQLEAQTNFTKRELQVLYRGFKNEXPS----GVVNEETFKQIYAQFFPHGDASTYAHYL 61
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
F +D QTG ++ E+ ++ +L + + + TF DI+KDG INKE
Sbjct: 62 -FNAFDTTQTGSVKFEDFVTALSILLRGT--------VHEKLRWTFNLYDINKDGYINKE 112
Query: 184 EWKEFAVRNPSLLKNMTLPYLTDIT 208
E + ++ T P L + T
Sbjct: 113 EMMDIVKAIYDMMGKYTYPVLKEDT 137
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAIL-MESEIKLP---DDLLEAIIDKTFADADIDKDGR 179
F LYD+ + GYI +EE+ +V AI M + P +D +D F D +KDG
Sbjct: 97 TFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGI 156
Query: 180 INKEEWKEFAVRNPSLLKNMTL 201
+ +E+ E + ++++++ L
Sbjct: 157 VTLDEFLESXQEDDNIMRSLQL 178
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEE 184
FR++D GYI+ +E+K M+ A E DD I++ D D + DGRI+ +E
Sbjct: 101 FRMFDKNADGYIDLDELKIMLQAT---GETITEDD-----IEELMKDGDKNNDGRIDYDE 152
Query: 185 WKEF 188
W EF
Sbjct: 153 WLEF 156
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRIN 181
AF+LYDL + G I R E+ Q++ ++ +++ ++ LE I D+T +AD D DG ++
Sbjct: 119 AFQLYDLDRDGKISRHEMLQVLRLMV---GVQVTEEQLENIADRTVQEADEDGDGAVS 173
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAIL-MESEIKLP---DDLLEAIIDKTFADADIDKDGR 179
AF LYD+ + GYI +EE+ ++ AI M + P +D ++ F D +KDG
Sbjct: 143 AFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGV 202
Query: 180 INKEEWKEFAVRNPSLLKNMTL 201
+ +E+ E ++ +++++M L
Sbjct: 203 VTIDEFIESCQKDENIMRSMQL 224
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 69/161 (42%), Gaps = 23/161 (14%)
Query: 47 SCFRYRPPVQKCRFDVGDLARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQV 106
+ R+RP L L A+S+F+ EL+ L +KN S G++++E +
Sbjct: 43 ATVRHRPEA---------LELLEAQSKFTKKELQILYRGFKNECPS----GVVNEETFKE 89
Query: 107 ALFQA-PYGENLFLDRVVAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAII 165
Q P G++ + F +D G + E+ + ++ +L + ++ +
Sbjct: 90 IYSQFFPQGDSTTYAHFL-FNAFDTDHNGAVSFEDFIKGLSILLRGT--------VQEKL 140
Query: 166 DKTFADADIDKDGRINKEEWKEFAVRNPSLLKNMTLPYLTD 206
+ F DI+KDG I KEE + ++ T P L +
Sbjct: 141 NWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKE 181
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAIL-MESEIKLP---DDLLEAIIDKTFADADIDKDGR 179
F LYD+ + GYI +EE+ +V AI M + P +D +D F D +KDG
Sbjct: 94 TFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGI 153
Query: 180 INKEEWKEFAVRNPSLLKNMTL 201
+ +E+ E + ++++++ L
Sbjct: 154 VTLDEFLESCQEDDNIMRSLQL 175
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 65 LARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQA-PYGENLFLDRVV 123
L +L A++ F+ EL+ L +KN S G+++++ + Q P+G+ +
Sbjct: 3 LEQLEAQTNFTKRELQVLYRGFKNECPS----GVVNEDTFKQIYAQFFPHGDASTYAHYL 58
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
F +D QTG ++ E+ ++ +L + + + TF DI+KDG INKE
Sbjct: 59 -FNAFDTTQTGSVKFEDFVTALSILLRGT--------VHEKLRWTFNLYDINKDGYINKE 109
Query: 184 EWKEFAVRNPSLLKNMTLPYLTDIT 208
E + ++ T P L + T
Sbjct: 110 EMMDIVKAIYDMMGKYTYPVLKEDT 134
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 37.7 bits (86), Expect = 0.005, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 8/66 (12%)
Query: 120 DRVVAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGR 179
D VAFR +D G+I +E+++ +A + LP + L+A+I +AD+D+DGR
Sbjct: 7 DLQVAFRAFDQDGDGHITVDELRRAMAGLGQ----PLPQEELDAMI----READVDQDGR 58
Query: 180 INKEEW 185
+N EE+
Sbjct: 59 VNYEEF 64
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 65 LARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQA-PYGENLFLDRVV 123
L +L A++ F+ EL+ L +KN S G+++++ + Q P+G+ +
Sbjct: 3 LEQLEAQTNFTKRELQVLYRGFKNECPS----GVVNEDTFKQIYAQFFPHGDASTYAHYL 58
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
F +D QTG ++ E+ ++ +L + + + TF DI+KDG INKE
Sbjct: 59 -FNAFDTTQTGSVKFEDFVTALSILLRGT--------VHEKLRWTFNLYDINKDGYINKE 109
Query: 184 EWKEFAVRNPSLLKNMTLPYLTDIT 208
E + ++ T P L + T
Sbjct: 110 EMMDIVKAIYDMMGAYTYPVLAEDT 134
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAIL-MESEIKLP---DDLLEAIIDKTFADADIDKDGR 179
F LYD+ + GYI +EE+ +V AI M P +D +D F D +KDG
Sbjct: 94 TFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGI 153
Query: 180 INKEEWKEFAVRNPSLLKNMTL 201
+ +E+ E + ++++++ L
Sbjct: 154 VTLDEFLESCQEDDNIMRSLQL 175
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AF+++D Q GYI E++ ++ I L + L + +++ +AD+D DG++N E
Sbjct: 9 AFKVFDKDQNGYISASELRHVM--------INLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 184 EW 185
E+
Sbjct: 61 EF 62
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 380 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 431
Query: 184 EW 185
E+
Sbjct: 432 EF 433
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D Q G+I E++ ++ L + L + +D+ +AD+D DG+IN E
Sbjct: 89 AFRVFDKDQNGFISAAELRHVMT--------NLGEKLTDEEVDEMIREADVDGDGQINYE 140
Query: 184 EW 185
E+
Sbjct: 141 EF 142
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 389 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 184 EW 185
E+
Sbjct: 441 EF 442
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 8/61 (13%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AF+++D Q GYI E++ ++ I L + L + +++ +AD+D DG++N E
Sbjct: 14 AFKVFDKDQNGYISASELRHVM--------INLGEKLTDEEVEQMIKEADLDGDGQVNYE 65
Query: 184 E 184
E
Sbjct: 66 E 66
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AF+++D Q GYI E++ ++ I L + L + +++ +AD+D DG++N E
Sbjct: 88 AFKVFDKDQNGYISASELRHVM--------INLGEKLTDEEVEQMIKEADLDGDGQVNYE 139
Query: 184 EW 185
E+
Sbjct: 140 EF 141
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D Q G+I E++ ++ L + L + +D+ +AD+D DG+IN E
Sbjct: 9 AFRVFDKDQNGFISAAELRHVMT--------NLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 184 EW 185
E+
Sbjct: 61 EF 62
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 388 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Query: 184 EW 185
E+
Sbjct: 440 EF 441
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 389 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 184 EW 185
E+
Sbjct: 441 EF 442
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 390 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 441
Query: 184 EW 185
E+
Sbjct: 442 EF 443
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 388 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Query: 184 EW 185
E+
Sbjct: 440 EF 441
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 388 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Query: 184 EW 185
E+
Sbjct: 440 EF 441
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 389 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 184 EW 185
E+
Sbjct: 441 EF 442
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 389 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 184 EW 185
E+
Sbjct: 441 EF 442
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 352 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 403
Query: 184 EW 185
E+
Sbjct: 404 EF 405
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 389 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 184 EW 185
E+
Sbjct: 441 EF 442
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFRLYDL + I R+E+ Q++ ++ + + D+ L +I D+T +AD D D I+
Sbjct: 118 AFRLYDLDKDDKISRDELLQVLRMMVG---VNISDEQLGSIADRTIQEADQDGDSAISFT 174
Query: 184 EW 185
E+
Sbjct: 175 EF 176
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 355 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 406
Query: 184 EW 185
E+
Sbjct: 407 EF 408
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 355 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 406
Query: 184 EW 185
E+
Sbjct: 407 EF 408
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 79 LEALSELYKNLSCSIIKDG--LIHKEELQVALFQAPYGENLFLDRVV-AFRLYDLRQTGY 135
E E K + I KDG I EE + + A GE + ++ AFRL+D +TG
Sbjct: 39 FEPKKEEIKKMIADIDKDGSGTIDFEEF-LQMMTAKMGERDSREEIMKAFRLFDDDETGK 97
Query: 136 IEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEW 185
I + +K+ VA L E+ + D+ L+ +ID +AD D DG +N+EE+
Sbjct: 98 ISFKNLKR-VAKELGEN---MTDEELQEMID----EADRDGDGEVNEEEF 139
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFRLYDL + I R+E+ Q++ ++ + + D+ L +I D+T +AD D D I+
Sbjct: 118 AFRLYDLDKDEKISRDELLQVLRMMVG---VNISDEQLGSIADRTIQEADQDGDSAISFT 174
Query: 184 EW 185
E+
Sbjct: 175 EF 176
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 89 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDQMIREADIDGDGQVNYE 140
Query: 184 EW 185
E+
Sbjct: 141 EF 142
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 92 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 143
Query: 184 EW 185
E+
Sbjct: 144 EF 145
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 85 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 136
Query: 184 EW 185
E+
Sbjct: 137 EF 138
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 84 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 135
Query: 184 EW 185
E+
Sbjct: 136 EF 137
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 10 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 184 EW 185
E+
Sbjct: 62 EF 63
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 86 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 184 EW 185
E+
Sbjct: 138 EF 139
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 86 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 184 EW 185
E+
Sbjct: 138 EF 139
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 90 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 141
Query: 184 EW 185
E+
Sbjct: 142 EF 143
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 86 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 184 EW 185
E+
Sbjct: 138 EF 139
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 89 AFRVFDKDGNGYISAAELRHVMT--------NLGEXLTDEEVDEMIREADIDGDGQVNYE 140
Query: 184 EW 185
E+
Sbjct: 141 EF 142
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 88 AFRVFDKDGNGYISAAELRHVMT--------NLGEXLTDEEVDEMIREADIDGDGQVNYE 139
Query: 184 EW 185
E+
Sbjct: 140 EF 141
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 89 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 184 EW 185
E+
Sbjct: 141 EF 142
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 89 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 184 EW 185
E+
Sbjct: 141 EF 142
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 89 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 184 EW 185
E+
Sbjct: 141 EF 142
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 88 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 184 EW 185
E+
Sbjct: 140 EF 141
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI AA L L + L + +D+ +ADID DG++N E
Sbjct: 89 AFRVFDKDGNGYI--------SAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYE 140
Query: 184 EW 185
E+
Sbjct: 141 EF 142
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 89 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 184 EW 185
E+
Sbjct: 141 EF 142
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 87 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 138
Query: 184 EW 185
E+
Sbjct: 139 EF 140
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 94 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 145
Query: 184 EW 185
E+
Sbjct: 146 EF 147
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 88 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 184 EW 185
E+
Sbjct: 140 EF 141
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI AA L L + L + +D+ +ADID DG++N E
Sbjct: 88 AFRVFDKDGNGYI--------SAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYE 139
Query: 184 EW 185
E+
Sbjct: 140 EF 141
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 10 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 184 EW 185
E+
Sbjct: 62 EF 63
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 7 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 58
Query: 184 EW 185
E+
Sbjct: 59 EF 60
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 14/98 (14%)
Query: 96 DGLIHKEELQVALFQAPYGENLFL--------DRVVAF----RLYDLRQTGYIEREEVKQ 143
DG + EEL + P EN L D V F R YD +GYI E+K
Sbjct: 71 DGRLQIEELANXIL--PQEENFLLIFRREAPLDNSVEFXKIWRKYDADSSGYISAAELKN 128
Query: 144 MVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRIN 181
+ + ++ + K+P + L+ D D +KDGR++
Sbjct: 129 FLKDLFLQHKKKIPPNKLDEYTDAXXKIFDKNKDGRLD 166
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEE 184
FR++D GYI+ EE+K M+ A E DD I++ D D + DGRI+ +E
Sbjct: 101 FRMFDKNADGYIDLEELKIMLQAT---GETITEDD-----IEELMKDGDKNNDGRIDYDE 152
Query: 185 WKEF 188
+ EF
Sbjct: 153 FLEF 156
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 11 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 62
Query: 184 EW 185
E+
Sbjct: 63 EF 64
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 88 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 184 EW 185
E+
Sbjct: 140 EF 141
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEE 184
FR++D GYI+ EE+K M+ A E DD I++ D D + DGRI+ +E
Sbjct: 101 FRMFDKNADGYIDLEELKIMLQAT---GETITEDD-----IEELMKDGDKNNDGRIDYDE 152
Query: 185 WKEF 188
+ EF
Sbjct: 153 FLEF 156
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEE 184
FR++D GYI+ EE+K M+ A E DD I++ D D + DGRI+ +E
Sbjct: 101 FRMFDKNADGYIDLEELKIMLQAT---GETITEDD-----IEELMKDGDKNNDGRIDYDE 152
Query: 185 WKEF 188
+ EF
Sbjct: 153 FLEF 156
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D Q G+I E++ ++ L + L + +D+ +AD+D DG+IN +
Sbjct: 89 AFRVFDKDQNGFISAAELRHVMT--------NLGEKLTDEEVDEMIREADVDGDGQINYD 140
Query: 184 EW 185
E+
Sbjct: 141 EF 142
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 13 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 64
Query: 184 EW 185
E+
Sbjct: 65 EF 66
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI AA L L + L + +D+ +ADID DG++N E
Sbjct: 88 AFRVFDKDGNGYI--------SAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYE 139
Query: 184 EW 185
E+
Sbjct: 140 EF 141
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEE 184
FR++D GYI+ EE+K M+ A E DD I++ D D + DGRI+ +E
Sbjct: 13 FRMFDKNADGYIDLEELKIMLQAT---GETITEDD-----IEELMKDGDKNNDGRIDYDE 64
Query: 185 WKEF 188
+ EF
Sbjct: 65 FLEF 68
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEE 184
FR++D GYI+ EE+K M+ A E DD I++ D D + DGRI+ +E
Sbjct: 11 FRMFDKNADGYIDLEELKIMLQAT---GETITEDD-----IEELMKDGDKNNDGRIDYDE 62
Query: 185 WKEF 188
+ EF
Sbjct: 63 FLEF 66
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEE 184
FR++D GYI+ EE+K M+ A E DD I++ D D + DGRI+ +E
Sbjct: 21 FRMFDKNADGYIDLEELKIMLQAT---GETITEDD-----IEELMKDGDKNNDGRIDYDE 72
Query: 185 WKEF 188
+ EF
Sbjct: 73 FLEF 76
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 14 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 65
Query: 184 EW 185
E+
Sbjct: 66 EF 67
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTF-ADADIDKDGRINKE 183
FR+ D Q+G+IE +E+K + ES + +L A KTF A AD D DG+I E
Sbjct: 47 FRILDNDQSGFIEEDELKYFLQR--FESGAR----VLTASETKTFLAAADHDGDGKIGAE 100
Query: 184 EWKE 187
E++E
Sbjct: 101 EFQE 104
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAIL-MESEIKLP---DDLLEAIIDKTFADADIDKDGR 179
AF LYD+ + GYI +EE+ ++ +I M P +D +++ F D ++DG
Sbjct: 14 AFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDRNQDGV 73
Query: 180 INKEEWKEFAVRNPSLLKNMTL 201
+ EE+ E ++ +++ +M L
Sbjct: 74 VTIEEFLEACQKDENIMSSMQL 95
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEE 184
FR++D GYI+ EE+K M+ A E DD I++ D D + DGRI+ +E
Sbjct: 16 FRMFDKNADGYIDLEELKIMLQAT---GETITEDD-----IEELMKDGDKNNDGRIDYDE 67
Query: 185 WKEF 188
+ EF
Sbjct: 68 FLEF 71
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D G+I E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 86 AFRVFDKDGNGFISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 184 EW 185
E+
Sbjct: 138 EF 139
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D G+I E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 89 AFRVFDKDGNGFISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 184 EW 185
E+
Sbjct: 141 EF 142
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +A+ID DG++N E
Sbjct: 83 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREANIDGDGQVNYE 134
Query: 184 EW 185
E+
Sbjct: 135 EF 136
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D G+I E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 88 AFRVFDKDGNGFISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 184 EW 185
E+
Sbjct: 140 EF 141
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D G+I E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 88 AFRVFDKDGNGFISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 184 EW 185
E+
Sbjct: 140 EF 141
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D G+I E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 89 AFRVFDKDGNGFISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 184 EW 185
E+
Sbjct: 141 EF 142
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 34.7 bits (78), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEE 184
FR++D GYI+ +E+K M+ A E DD I++ D D + DGRI+ +E
Sbjct: 12 FRMFDKNADGYIDLDELKIMLQAT---GETITEDD-----IEELMKDGDKNNDGRIDYDE 63
Query: 185 WKEF 188
+ EF
Sbjct: 64 FLEF 67
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI E++ ++ L + L + +D+ +A+ID DG++N E
Sbjct: 88 AFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREANIDGDGQVNYE 139
Query: 184 EW 185
E+
Sbjct: 140 EF 141
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR+ D GYI E++ ++ L + L + +D+ +ADID DG++N E
Sbjct: 34 AFRVEDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYE 85
Query: 184 EW 185
E+
Sbjct: 86 EF 87
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 34.3 bits (77), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEE 184
FR++D GYI+ +E+K M+ A E DD I++ D D + DGRI+ +E
Sbjct: 101 FRMWDKNADGYIDLDELKIMLQAT---GETITEDD-----IEELMKDGDKNNDGRIDYDE 152
Query: 185 WKEF 188
+ EF
Sbjct: 153 FLEF 156
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 34.3 bits (77), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D G+I E++ ++ L + L + +D+ +AD+D DG++N E
Sbjct: 85 AFRVFDKDGNGFISAAELRHVMT--------NLGEKLTDEEVDEMIREADVDGDGQVNYE 136
Query: 184 EW 185
E+
Sbjct: 137 EF 138
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 34.3 bits (77), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D G+I E++ ++ L + L + +D+ +AD+D DG++N E
Sbjct: 88 AFRVFDKDGNGFISAAELRHVMT--------NLGEKLTDEEVDEMIREADVDGDGQVNYE 139
Query: 184 EW 185
E+
Sbjct: 140 EF 141
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D G+I E++ ++ L + L + +D+ +AD+D DG++N E
Sbjct: 88 AFRVFDKDGNGFISAAELRHVMT--------NLGEKLTDEEVDEMIREADVDGDGQVNYE 139
Query: 184 EW 185
E+
Sbjct: 140 EF 141
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 33.9 bits (76), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D G+I E++ ++ L + L + +D+ ++DID DG++N E
Sbjct: 89 AFRVFDKDGNGFISAAELRHVMT--------NLGEKLTDEEVDEMIRESDIDGDGQVNYE 140
Query: 184 EW 185
E+
Sbjct: 141 EF 142
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 33.9 bits (76), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 17/69 (24%)
Query: 125 FRLYDLRQTGYIEREEVK------QMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDG 178
FR D Q+GY++ EE+K + A L ESE K A AD D DG
Sbjct: 48 FRFIDNDQSGYLDEEELKFFLQKFESGARELTESETK-----------SLMAAADNDGDG 96
Query: 179 RINKEEWKE 187
+I EE++E
Sbjct: 97 KIGAEEFQE 105
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 33.5 bits (75), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 8/64 (12%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEE 184
FR++D GYI+ +E+K M+ A E DD I++ D D + DGRI+ +E
Sbjct: 101 FRMFDKNADGYIDLDELKIMLQAT---GETITEDD-----IEELMKDGDKNNDGRIDYDE 152
Query: 185 WKEF 188
EF
Sbjct: 153 XLEF 156
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAIL-------MESEIKLPDDLL--EAIIDKTFADADI 174
F++YD + G I+R+E+ +V +I +E E + LL E ++D+ F D
Sbjct: 100 TFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDE 159
Query: 175 DKDGRINKEEWKEFAVRNPSLLKNMTL 201
+ DG+++ E+ E A R+ ++K + +
Sbjct: 160 NGDGQLSLNEFVEGARRDKWVMKMLQM 186
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D GYI AA L L + L + +D+ +ADID DG++N E
Sbjct: 12 AFRVFDKDGNGYIS--------AADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 63
Query: 184 EW 185
++
Sbjct: 64 DF 65
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 8/64 (12%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEE 184
FR+ D GYI+ +E+K M+ A E DD I++ D D + DGRI+ +E
Sbjct: 101 FRMXDKNADGYIDLDELKIMLQAT---GETITEDD-----IEELMKDGDKNNDGRIDYDE 152
Query: 185 WKEF 188
+ EF
Sbjct: 153 FLEF 156
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 17/69 (24%)
Query: 125 FRLYDLRQTGYIEREEVK------QMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDG 178
FR D Q+GY++ +E+K Q A L ESE K L++A AD D DG
Sbjct: 47 FRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETK---SLMDA--------ADNDGDG 95
Query: 179 RINKEEWKE 187
+I +E++E
Sbjct: 96 KIGADEFQE 104
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 122 VVAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRIN 181
+ AF+++D G I E++ ++ L + L + +D+ +ADID DG IN
Sbjct: 86 IEAFKVFDRDGNGLISAAELRHVMT--------NLGEKLTDDEVDEMIREADIDGDGHIN 137
Query: 182 KEEW 185
EE+
Sbjct: 138 YEEF 141
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 122 VVAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRIN 181
+ AF+++D G I E++ ++ L + L + +D+ +ADID DG IN
Sbjct: 86 IEAFKVFDRDGNGLISAAELRHVMT--------NLGEKLTDDEVDEMIREADIDGDGHIN 137
Query: 182 KEEW 185
EE+
Sbjct: 138 YEEF 141
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 13/114 (11%)
Query: 96 DGLIHKEELQVAL---FQAPYGENLFLDRVVAFRLYDLRQTGYIEREEVKQMVAAIL-ME 151
+G IH E+ V L + E L AF LYD+ + G I +EE+ ++ +I M
Sbjct: 143 NGAIHFEDFVVGLSILLRGTVHEKL----KWAFNLYDINKDGCITKEEMLAIMKSIYDMM 198
Query: 152 SEIKLP----DDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSLLKNMTL 201
P D LE +++ F D ++DG + +E+ E ++ +++ +M L
Sbjct: 199 GRHTYPILREDAPLEH-VERFFQKMDRNQDGVVTIDEFLETCQKDENIMNSMQL 251
Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Query: 65 LARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQA-PYGENLFLDRVV 123
L +L A+++F+ EL++L +KN C GL+ ++ ++ Q P G+ +
Sbjct: 79 LDQLQAQTKFTKKELQSLYRGFKN-ECPT---GLVDEDTFKLIYSQFFPQGDATTYAHFL 134
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
F +D G I E+ ++ +L + + + F DI+KDG I KE
Sbjct: 135 -FNAFDADGNGAIHFEDFVVGLSILLRGT--------VHEKLKWAFNLYDINKDGCITKE 185
Query: 184 E 184
E
Sbjct: 186 E 186
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 14/64 (21%)
Query: 125 FRLYDLRQTGYIEREEVK---QMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRIN 181
F++ D +G I +E+K + V + LMESEIK DL++A ADIDK G I+
Sbjct: 29 FKMIDTDNSGTITFDELKDGLKRVGSELMESEIK---DLMDA--------ADIDKSGTID 77
Query: 182 KEEW 185
E+
Sbjct: 78 YGEF 81
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 122 VVAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRIN 181
+ AF+++D G I E++ ++ L + L + +D+ +ADID DG IN
Sbjct: 11 IEAFKVFDRDGNGLISAAELRHVMT--------NLGEKLTDDEVDEMIREADIDGDGHIN 62
Query: 182 KEEW 185
EE+
Sbjct: 63 YEEF 66
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 14/64 (21%)
Query: 125 FRLYDLRQTGYIEREEVK---QMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRIN 181
F++ D +G I +E+K + V + LMESEIK DL++A ADIDK G I+
Sbjct: 16 FKMIDTDNSGTITFDELKDGLKRVGSELMESEIK---DLMDA--------ADIDKSGTID 64
Query: 182 KEEW 185
E+
Sbjct: 65 YGEF 68
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLL--EAIIDKTFADADIDKDGRINK 182
F+LYD+ G I+R E+ ++ AI I ++ + E + F DI+ DG ++
Sbjct: 94 FKLYDVDGNGCIDRGELLNIIKAI---RAINRCNEAMTAEEFTNMVFDKIDINGDGELSL 150
Query: 183 EEWKEFAVRNPSLLKNMT 200
EE+ E ++ LL +T
Sbjct: 151 EEFMEGVQKDEVLLDILT 168
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR++D G++ E++ ++ +L + L + +D+ AD D DG++N E
Sbjct: 88 AFRVFDKDGNGFVSAAELRHVMT--------RLGEKLSDEEVDEMIRAADTDGDGQVNYE 139
Query: 184 EW 185
E+
Sbjct: 140 EF 141
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFRLYD GYI + +++ IL E + L + L+A+ID+ D D G ++ E
Sbjct: 96 AFRLYDKEGNGYISTDVMRE----ILAELDETLSSEDLDAMIDEI----DADGSGTVDFE 147
Query: 184 EW 185
E+
Sbjct: 148 EF 149
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AF+L+D +TG I + +K+ VA L E+ L D+ L+ +ID +AD D DG ++++
Sbjct: 26 AFKLFDDDETGKISFKNLKR-VAKELGEN---LTDEELQEMID----EADRDGDGEVSEQ 77
Query: 184 EW 185
E+
Sbjct: 78 EF 79
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAI--LMESEIKLPDDLLEAIIDKTFADADIDKDGRINK 182
F+LYD G I++ E+ M A+ L + P E I+ F DI+ DG +
Sbjct: 99 FKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSP----EEFINLVFHKIDINNDGELTL 154
Query: 183 EEWKEFAVRNPSLLK 197
EE+ ++ LL+
Sbjct: 155 EEFINGMAKDQDLLE 169
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFRLYD GYI + +++ IL E + L + L+A+ID+ D D G ++ E
Sbjct: 8 AFRLYDKEGNGYISTDVMRE----ILAELDETLSSEDLDAMIDEI----DADGSGTVDFE 59
Query: 184 EW 185
E+
Sbjct: 60 EF 61
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEE 184
F + D Q+G+IE EE+K ++ DL + A D D DG+I +E
Sbjct: 47 FEILDKDQSGFIEEEELKGVLKGFSAHGR-----DLNDTETKALLAAGDSDHDGKIGADE 101
Query: 185 W 185
+
Sbjct: 102 F 102
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AF+L+D +TG I + +K+ VA L E+ L D+ L+ +ID +AD D DG ++++
Sbjct: 84 AFKLFDDDETGKISFKNLKR-VAKELGEN---LTDEELQEMID----EADRDGDGEVSEQ 135
Query: 184 EW 185
E+
Sbjct: 136 EF 137
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 8/61 (13%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEE 184
FR++D GYI+ EE +A I S + D+ +E+++ D D + DGRI+ +E
Sbjct: 99 FRIFDRNADGYIDAEE----LAEIFRASGEHVTDEEIESLM----KDGDKNNDGRIDFDE 150
Query: 185 W 185
+
Sbjct: 151 F 151
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AF+L+D +TG I + +K+ VA L E+ L D+ L+ ID +AD D DG ++++
Sbjct: 109 AFKLFDDDETGKISFKNLKR-VAKELGEN---LTDEELQEXID----EADRDGDGEVSEQ 160
Query: 184 EW 185
E+
Sbjct: 161 EF 162
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AF+L+D +TG I + +K+ VA L E+ L D+ L+ +ID +AD D DG ++++
Sbjct: 16 AFKLFDDDETGKISFKNLKR-VAKELGEN---LTDEELQEMID----EADRDGDGEVSEQ 67
Query: 184 EW 185
E+
Sbjct: 68 EF 69
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AF+++D G+I E++ ++ I L + + + ID+ +AD D DG IN E
Sbjct: 88 AFKIFDRDGDGFISPAELRFVM--------INLGEKVTDEEIDEMIREADFDGDGMINYE 139
Query: 184 EW 185
E+
Sbjct: 140 EF 141
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 8/61 (13%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEE 184
FR++D GYI+ EE +A I S + D+ +E+++ D D + DGRI+ +E
Sbjct: 99 FRIFDRNADGYIDAEE----LAEIFRASGEHVTDEEIESLM----KDGDKNNDGRIDFDE 150
Query: 185 W 185
+
Sbjct: 151 F 151
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 122 VVAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRIN 181
++ F+ +D+ G I EE+K+ I +I+ P L++ ID + D++ DG I+
Sbjct: 132 LIPFKFFDIDGNGKISVEELKR----IFGRDDIENP--LIDKAIDSLLQEVDLNGDGEID 185
Query: 182 KEEW 185
E+
Sbjct: 186 FHEF 189
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRI 180
+R YD +G+IE EE+K + +L ++ + D L D D + DG++
Sbjct: 108 TWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKL 164
>pdb|3GJX|A Chain A, Crystal Structure Of The Nuclear Export Complex Crm1-
Snurportin1-Rangtp
pdb|3GJX|D Chain D, Crystal Structure Of The Nuclear Export Complex Crm1-
Snurportin1-Rangtp
pdb|3NBY|A Chain A, Crystal Structure Of The Pki Nes-Crm1-Rangtp Nuclear
Export Complex
pdb|3NBY|D Chain D, Crystal Structure Of The Pki Nes-Crm1-Rangtp Nuclear
Export Complex
pdb|3NBZ|A Chain A, Crystal Structure Of The Hiv-1 Rev Nes-Crm1-Rangtp Nuclear
Export Complex (Crystal I)
pdb|3NBZ|D Chain D, Crystal Structure Of The Hiv-1 Rev Nes-Crm1-Rangtp Nuclear
Export Complex (Crystal I)
pdb|3NC0|A Chain A, Crystal Structure Of The Hiv-1 Rev Nes-Crm1-Rangtp Nuclear
Export Complex (Crystal Ii)
pdb|3NC0|D Chain D, Crystal Structure Of The Hiv-1 Rev Nes-Crm1-Rangtp Nuclear
Export Complex (Crystal Ii)
pdb|3NC1|A Chain A, Crystal Structure Of The Crm1-Rangtp Complex
Length = 1073
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 133 TGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
GY+ + Q V L+E + LP+ + ++II + + DI KD K+
Sbjct: 639 VGYMIGAQTDQTVQEHLIEKYMLLPNQVWDSIIQQATKNVDILKDPETVKQ 689
>pdb|3GB8|A Chain A, Crystal Structure Of Crm1SNURPORTIN-1 Complex
Length = 1071
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 133 TGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
GY+ + Q V L+E + LP+ + ++II + + DI KD K+
Sbjct: 637 VGYMIGAQTDQTVQEHLIEKYMLLPNQVWDSIIQQATKNVDILKDPETVKQ 687
>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From
Arabidopsis Thaliana Gene At1g07440
pdb|2Q45|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Putative Tropinone Reductase From Arabidopsis Thaliana
Gene At1g07440
Length = 266
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 81 ALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLD---RVVAFRLYDLRQTGYIE 137
AL++L +NL+C DG I + A+ P E ++ D +VV R R + E
Sbjct: 170 ALNQLARNLACEWASDG-IRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGR---FGE 225
Query: 138 REEVKQMVAAILM 150
EEV +VA + M
Sbjct: 226 PEEVSSLVAFLCM 238
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 8/61 (13%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEE 184
FR++D G+I+ EE+ +++ A + ++E I+ D+D + DGRI+ +E
Sbjct: 102 FRIFDKNADGFIDIEELGEILRAT--------GEHVIEEDIEDLMKDSDKNNDGRIDFDE 153
Query: 185 W 185
+
Sbjct: 154 F 154
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 8/61 (13%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEE 184
FR++D G+I+ EE+ +++ A + ++E I+ D+D + DGRI+ +E
Sbjct: 16 FRIFDKNADGFIDIEELGEILRAT--------GEHVIEEDIEDLMKDSDKNNDGRIDFDE 67
Query: 185 W 185
+
Sbjct: 68 F 68
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 17/68 (25%)
Query: 124 AFRLYDLRQTGYIEREEVKQMV------AAILMESEIKLPDDLLEAIIDKTFADADIDKD 177
AF + D ++G+IE +E+K + A L + E K L+A D D D
Sbjct: 46 AFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKT---FLKA--------GDSDGD 94
Query: 178 GRINKEEW 185
G+I +EW
Sbjct: 95 GKIGVDEW 102
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AF+L+D TG I + +++ VA L E+ L D+ L A+I++ D+D DG IN+
Sbjct: 101 AFQLFDDDHTGKISIKNLRR-VAKELGET---LTDEELRAMIEEF----DLDGDGEINEN 152
Query: 184 EW 185
E+
Sbjct: 153 EF 154
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AF D ++G+IE +E+K + + L D +A + D D DG I E
Sbjct: 47 AFVFIDQDKSGFIEEDELKLFLQ-VFKAGARALTDAETKAFLKA----GDSDGDGAIGVE 101
Query: 184 EW 185
EW
Sbjct: 102 EW 103
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AF D ++G+IE +E+K + + L D +A + D D DG I E
Sbjct: 46 AFVFIDQDKSGFIEEDELKLFLQ-VFKAGARALTDAETKAFLKA----GDSDGDGAIGVE 100
Query: 184 EW 185
EW
Sbjct: 101 EW 102
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AFR +D G I E+++ + A+L ++ D I++ D D++ DGR++ E
Sbjct: 93 AFREFDTNGDGEISTSELREAMRALL-GHQVGHRD------IEEIIRDVDLNGDGRVDFE 145
Query: 184 EWKEFAVR 191
E+ R
Sbjct: 146 EFVRMMSR 153
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEE 184
FR++D G+I+ EE+ +++ A + + E I+ D+D + DGRI+ +E
Sbjct: 102 FRIFDKNADGFIDIEELGEILRAT--------GEHVTEEDIEDLMKDSDKNNDGRIDFDE 153
Query: 185 W 185
+
Sbjct: 154 F 154
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEE 184
FR++D G+I+ EE+ +++ A + + E I+ D+D + DGRI+ +E
Sbjct: 99 FRIFDKNADGFIDIEELGEILRAT--------GEHVTEEDIEDLMKDSDKNNDGRIDFDE 150
Query: 185 W 185
+
Sbjct: 151 F 151
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 27.3 bits (59), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 120 DRVVAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGR 179
DR F+ +D G I E+ + + + PD+ + + A+ D D DG
Sbjct: 12 DRERIFKRFDTNGDGKISSSELGDALKTLGSVT----PDE-----VRRMMAEIDTDGDGF 62
Query: 180 INKEEWKEFAVRNPSLLKNMT 200
I+ +E+ +FA N L+K+++
Sbjct: 63 ISFDEFTDFARANRGLVKDVS 83
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 27.3 bits (59), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEE 184
FR++D G+I+ EE+ +++ A + + E I+ D+D + DGRI+ +E
Sbjct: 102 FRIFDKNADGFIDIEELGEILRAT--------GEHVTEEDIEDLMKDSDKNNDGRIDFDE 153
Query: 185 W 185
+
Sbjct: 154 F 154
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 125 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEE 184
FR++D G+I+ EE+ +++ A + + E I+ D+D + DGRI+ +E
Sbjct: 102 FRIFDKNADGFIDIEELGEILRAT--------GEHVTEEDIEDLMKDSDKNNDGRIDFDE 153
Query: 185 W 185
+
Sbjct: 154 F 154
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 26.9 bits (58), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 8/62 (12%)
Query: 124 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 183
AF+L+D TG I + +++ VA L E+ L D+ L A I++ D+D DG IN+
Sbjct: 101 AFQLFDDDHTGKISIKNLRR-VAKELGET---LTDEELRAXIEEF----DLDGDGEINEN 152
Query: 184 EW 185
E+
Sbjct: 153 EF 154
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 26.9 bits (58), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 115 ENLFLDRVVAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADI 174
+ F D + AF+ +D G+I E++ +++ + +L D+ ++ II+ T D
Sbjct: 80 QGTFADYMEAFKTFDREGQGFISGAELRHVLSGLGE----RLSDEEVDEIINLT--DLQE 133
Query: 175 DKDGRINKEEWKEFAVRNP 193
D +G + EE+ + + P
Sbjct: 134 DLEGNVKYEEFVKKVMAGP 152
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 165 IDKTFADADIDKDGRINKEEWKEFAVRNPSLLKNM 199
+ + A+ D D DG I+ E+ F NP L+K++
Sbjct: 40 VQRMMAEIDTDGDGFIDFNEFISFCNANPGLMKDV 74
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,584,073
Number of Sequences: 62578
Number of extensions: 201304
Number of successful extensions: 920
Number of sequences better than 100.0: 166
Number of HSP's better than 100.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 700
Number of HSP's gapped (non-prelim): 194
length of query: 222
length of database: 14,973,337
effective HSP length: 95
effective length of query: 127
effective length of database: 9,028,427
effective search space: 1146610229
effective search space used: 1146610229
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)