Your job contains 1 sequence.
>027552
MAEEAAKELTESNAAAEDMDLEGGENGGDANAKRARDDDDGGEGNGDVSKKQKIDEDEKS
VEEERLEKKEVVNGSGRVKLGPKEFGSSIEMFDYFYKFLHFWPPNLNVNKYEHMVLLDLL
KKGHPEPDKKIGGGIQAFQVRYHPTYKSRCFFLIREDETADDFSFRKCVDHMLPLPEDMK
VKSDANKALGGGGGGKGRGGGRGGHGHGKGGHGRGRGGKSRN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027552
(222 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2154089 - symbol:AT5G62440 "AT5G62440" species... 472 7.1e-45 1
TAIR|locus:504956149 - symbol:AT1G45230 "AT1G45230" speci... 135 3.9e-09 1
TAIR|locus:2075190 - symbol:AT3G46630 "AT3G46630" species... 106 8.2e-05 1
TAIR|locus:2061151 - symbol:NRPD1B "nuclear RNA polymeras... 110 0.00036 1
>TAIR|locus:2154089 [details] [associations]
symbol:AT5G62440 "AT5G62440" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0009790 "embryo development" evidence=IMP] [GO:0017126
"nucleologenesis" evidence=IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:0000741 "karyogamy" evidence=RCA]
[GO:0006606 "protein import into nucleus" evidence=RCA] [GO:0009560
"embryo sac egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0048825 "cotyledon development"
evidence=RCA] [GO:0051301 "cell division" evidence=RCA]
InterPro:IPR015801 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005507 GO:GO:0009790 GO:GO:0048038
GO:GO:0009308 Gene3D:3.10.450.40 GO:GO:0051302 InterPro:IPR021602
Pfam:PF11523 GO:GO:0017126 EMBL:AF371327 EMBL:AY087852
EMBL:BT008568 EMBL:BT008688 EMBL:AK175305 EMBL:AK229718
IPI:IPI00538360 RefSeq:NP_201050.2 UniGene:At.29048
UniGene:At.69486 ProteinModelPortal:Q8L557 SMR:Q8L557 IntAct:Q8L557
STRING:Q8L557 PaxDb:Q8L557 PRIDE:Q8L557 EnsemblPlants:AT5G62440.1
GeneID:836365 KEGG:ath:AT5G62440 KEGG:dosa:Os03t0187000-01
TAIR:At5g62440 eggNOG:NOG40610 HOGENOM:HOG000148618
InParanoid:Q8L557 OMA:KYEHMVL PhylomeDB:Q8L557
ProtClustDB:CLSN2918432 ArrayExpress:Q8L557 Genevestigator:Q8L557
Uniprot:Q8L557
Length = 202
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 84/106 (79%), Positives = 96/106 (90%)
Query: 75 SGRVKLGPKEFGSSIEMFDYFYKFLHFWPPNLNVNKYEHMVLLDLLKKGHPEPDKKIGGG 134
SG VKLGPKEF +S+ MFDYF KFLHFWP +L+VNKYEHMVLLDL+KKGH EP+KKIGGG
Sbjct: 64 SGPVKLGPKEFVTSVAMFDYFVKFLHFWPTDLDVNKYEHMVLLDLIKKGHSEPEKKIGGG 123
Query: 135 IQAFQVRYHPTYKSRCFFLIREDETADDFSFRKCVDHMLPLPEDMK 180
I+ FQVR HP +KSRCFFL+RED+TADDFSFRKCVD +LPLPE+MK
Sbjct: 124 IKTFQVRTHPMWKSRCFFLVREDDTADDFSFRKCVDQILPLPENMK 169
>TAIR|locus:504956149 [details] [associations]
symbol:AT1G45230 "AT1G45230" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] InterPro:IPR015801 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0005507 GO:GO:0048038
GO:GO:0009308 Gene3D:3.10.450.40 EMBL:AC083835 InterPro:IPR021602
Pfam:PF11523 EMBL:AY128277 EMBL:BT014877 EMBL:AK220622
IPI:IPI00534712 PIR:C96510 RefSeq:NP_683398.1 UniGene:At.38718
ProteinModelPortal:Q9C642 SMR:Q9C642 PaxDb:Q9C642 PRIDE:Q9C642
EnsemblPlants:AT1G45230.1 GeneID:841096 KEGG:ath:AT1G45230
TAIR:At1g45230 eggNOG:NOG257121 HOGENOM:HOG000005673
InParanoid:Q9C642 OMA:CIKGLIK PhylomeDB:Q9C642
ProtClustDB:CLSN2915113 Genevestigator:Q9C642 Uniprot:Q9C642
Length = 219
Score = 135 (52.6 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 112 EH-MVLLDLLKKGHPEPDKKIGGGIQAFQVRYHPTYKS-RCFFLIREDETADDFSFRKCV 169
EH ++++L HPE +KKIG GI V +HP ++S RC F++R+D DFS+ KC+
Sbjct: 133 EHERTIIEMLLPYHPECEKKIGCGIDYIMVGHHPDFESSRCMFIVRKDGEVVDFSYWKCI 192
Query: 170 DHML 173
++
Sbjct: 193 KGLI 196
>TAIR|locus:2075190 [details] [associations]
symbol:AT3G46630 "AT3G46630" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0042631 "cellular response to water
deprivation" evidence=RCA] InterPro:IPR015801 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005507 GO:GO:0048038
GO:GO:0009308 Gene3D:3.10.450.40 EMBL:AL133314 InterPro:IPR021602
Pfam:PF11523 HOGENOM:HOG000005673 EMBL:AY086108 EMBL:BT005493
EMBL:AK118966 IPI:IPI00517277 PIR:T45600 RefSeq:NP_190247.1
UniGene:At.35903 ProteinModelPortal:Q9SNB5 SMR:Q9SNB5 STRING:Q9SNB5
PaxDb:Q9SNB5 PRIDE:Q9SNB5 EnsemblPlants:AT3G46630.1 GeneID:823816
KEGG:ath:AT3G46630 TAIR:At3g46630 eggNOG:NOG311427
InParanoid:Q9SNB5 OMA:VDRHPQF PhylomeDB:Q9SNB5
ProtClustDB:CLSN2685120 ArrayExpress:Q9SNB5 Genevestigator:Q9SNB5
Uniprot:Q9SNB5
Length = 207
Score = 106 (42.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 112 EHMVLLDLLKKGHPEPDKKIGGGIQAFQVRYHPTYK-SRCFFLIREDETADDFSFRKCV 169
+ ++++ L HP KIG G+ V HP ++ SRC F++R D DFS++KC+
Sbjct: 124 DEKIVMEKLLPYHPYSKDKIGCGLDFIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCL 182
>TAIR|locus:2061151 [details] [associations]
symbol:NRPD1B "nuclear RNA polymerase D1B" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003899 "DNA-directed RNA polymerase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=ISS]
[GO:0000418 "DNA-directed RNA polymerase IV complex" evidence=IPI]
[GO:0006306 "DNA methylation" evidence=RCA;IMP] [GO:0000419
"DNA-directed RNA polymerase V complex" evidence=IDA;IPI]
[GO:0030880 "RNA polymerase complex" evidence=IPI] [GO:0035194
"posttranscriptional gene silencing by RNA" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0016604 "nuclear body" evidence=IDA] [GO:0030422
"production of siRNA involved in RNA interference"
evidence=IGI;IMP] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=RCA] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0006354 "DNA-dependent transcription, elongation"
evidence=RCA] [GO:0009555 "pollen development" evidence=RCA]
[GO:0016444 "somatic cell DNA recombination" evidence=RCA]
[GO:0016568 "chromatin modification" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0048451 "petal formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA] [GO:0051726
"regulation of cell cycle" evidence=RCA] InterPro:IPR000722
InterPro:IPR006592 InterPro:IPR007066 InterPro:IPR007080
InterPro:IPR007081 InterPro:IPR015801 Pfam:PF00623 Pfam:PF04983
Pfam:PF04997 Pfam:PF04998 SMART:SM00663 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0005507 GO:GO:0048038 GO:GO:0009308
Gene3D:3.10.450.40 GO:GO:0030422 GO:GO:0006306 Gene3D:2.40.40.20
InterPro:IPR009010 GO:GO:0016604 EMBL:AF002109 GO:GO:0003899
eggNOG:COG0086 GO:GO:0000418 InterPro:IPR021602 Pfam:PF11523
EMBL:AY826516 EMBL:AY927744 EMBL:DQ020656 IPI:IPI00537496
PIR:D84824 PIR:E84824 RefSeq:NP_181532.2 UniGene:At.37106
ProteinModelPortal:Q5D869 SMR:Q5D869 DIP:DIP-48678N IntAct:Q5D869
STRING:Q5D869 PaxDb:Q5D869 PRIDE:Q5D869 EnsemblPlants:AT2G40030.1
GeneID:818591 KEGG:ath:AT2G40030 TAIR:At2g40030
HOGENOM:HOG000082864 InParanoid:Q5D869 KO:K16251 OMA:QSDSWDG
PhylomeDB:Q5D869 ProtClustDB:CLSN2681712 Genevestigator:Q5D869
GO:GO:0000419 Uniprot:Q5D869
Length = 1976
Score = 110 (43.8 bits), Expect = 0.00036, P = 0.00036
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 97 KFLH--FWPPNLNVNKYEHMVLLDLLKKGHPEPDKKIGGGIQAFQVRYHPTYK-SRCFFL 153
K +H +P ++ + +L+ + HP+ + K+G G+ V H + SRCFF+
Sbjct: 1752 KIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDFITVDKHTIFSDSRCFFV 1811
Query: 154 IREDETADDFSFRKCVDHML 173
+ D DFS+RK +++ L
Sbjct: 1812 VSTDGAKQDFSYRKSLNNYL 1831
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.136 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 222 154 0.00088 105 3 11 22 0.38 32
30 0.41 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 571 (61 KB)
Total size of DFA: 143 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.33u 0.24s 12.57t Elapsed: 00:00:01
Total cpu time: 12.33u 0.24s 12.57t Elapsed: 00:00:01
Start: Fri May 10 22:21:09 2013 End: Fri May 10 22:21:10 2013