Query 027556
Match_columns 222
No_of_seqs 315 out of 1677
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 11:41:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027556.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027556hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK13463 phosphatase PhoE; Pro 100.0 4.9E-35 1.1E-39 243.0 15.2 140 81-221 2-141 (203)
2 PRK15004 alpha-ribazole phosph 100.0 2.7E-34 5.9E-39 237.5 15.6 138 82-220 1-138 (199)
3 PRK14116 gpmA phosphoglyceromu 100.0 6.3E-34 1.4E-38 240.4 15.9 138 81-219 1-168 (228)
4 PRK14119 gpmA phosphoglyceromu 100.0 1E-33 2.2E-38 239.1 16.1 139 81-220 1-169 (228)
5 PRK01112 phosphoglyceromutase; 100.0 5.1E-33 1.1E-37 235.0 16.0 137 81-218 1-166 (228)
6 PRK01295 phosphoglyceromutase; 100.0 6.8E-33 1.5E-37 230.8 16.3 138 81-219 2-145 (206)
7 TIGR03848 MSMEG_4193 probable 100.0 8.2E-33 1.8E-37 229.4 14.9 136 83-220 1-136 (204)
8 TIGR03162 ribazole_cobC alpha- 100.0 9E-33 1.9E-37 223.5 14.8 134 84-220 1-134 (177)
9 PRK14117 gpmA phosphoglyceromu 100.0 1.2E-32 2.7E-37 232.9 16.1 137 81-218 1-167 (230)
10 PRK03482 phosphoglycerate muta 100.0 1.6E-32 3.4E-37 229.4 15.4 139 81-220 1-139 (215)
11 PRK14118 gpmA phosphoglyceromu 100.0 1.6E-32 3.4E-37 231.8 15.3 137 82-219 1-167 (227)
12 COG0406 phoE Broad specificity 100.0 2.7E-32 5.9E-37 226.4 15.7 141 80-221 1-143 (208)
13 PRK14120 gpmA phosphoglyceromu 100.0 1.3E-31 2.7E-36 229.2 16.4 139 78-217 1-167 (249)
14 TIGR01258 pgm_1 phosphoglycera 100.0 1.7E-31 3.7E-36 227.9 15.7 137 82-219 1-167 (245)
15 PRK14115 gpmA phosphoglyceromu 100.0 4.1E-31 8.8E-36 225.8 15.9 137 82-219 1-167 (247)
16 PRK13462 acid phosphatase; Pro 100.0 4.2E-31 9.1E-36 219.6 15.2 130 80-220 4-136 (203)
17 PRK07238 bifunctional RNase H/ 100.0 1.7E-30 3.7E-35 233.8 18.3 141 78-220 168-309 (372)
18 PF00300 His_Phos_1: Histidine 100.0 9.9E-31 2.1E-35 205.9 9.2 136 83-219 1-138 (158)
19 smart00855 PGAM Phosphoglycera 100.0 1.4E-29 3E-34 200.9 14.1 132 83-220 1-135 (155)
20 PTZ00322 6-phosphofructo-2-kin 100.0 7.9E-29 1.7E-33 237.6 14.8 138 80-220 418-576 (664)
21 KOG0235 Phosphoglycerate mutas 100.0 4.5E-28 9.8E-33 201.0 12.3 142 79-221 3-152 (214)
22 PTZ00123 phosphoglycerate muta 99.9 1.2E-24 2.7E-29 184.7 13.8 124 94-218 1-154 (236)
23 COG0588 GpmA Phosphoglycerate 99.9 3E-24 6.5E-29 176.1 9.2 138 81-220 1-169 (230)
24 PTZ00122 phosphoglycerate muta 99.8 1.2E-19 2.5E-24 159.1 11.7 116 80-221 101-227 (299)
25 cd07067 HP_PGM_like Histidine 99.8 3.1E-19 6.8E-24 140.6 10.4 80 83-163 1-83 (153)
26 cd07040 HP Histidine phosphata 99.7 1.2E-16 2.6E-21 124.9 9.9 77 83-160 1-81 (153)
27 KOG0234 Fructose-6-phosphate 2 99.7 1.1E-16 2.4E-21 144.1 10.5 136 80-220 238-375 (438)
28 PRK06193 hypothetical protein; 99.7 4E-16 8.7E-21 129.7 12.9 82 69-150 30-117 (206)
29 KOG4754 Predicted phosphoglyce 99.7 2.8E-16 6E-21 129.0 10.0 142 78-221 11-179 (248)
30 TIGR00249 sixA phosphohistidin 99.7 2.4E-16 5.2E-21 125.4 9.0 68 82-154 1-70 (152)
31 PRK10848 phosphohistidine phos 99.7 3E-16 6.5E-21 125.8 9.4 68 82-154 1-70 (159)
32 PRK15416 lipopolysaccharide co 99.6 1.1E-15 2.4E-20 126.3 10.3 88 78-169 51-139 (201)
33 COG2062 SixA Phosphohistidine 99.6 9.9E-16 2.2E-20 122.6 8.4 69 81-152 1-71 (163)
34 KOG3734 Predicted phosphoglyce 99.5 1.1E-13 2.4E-18 118.5 10.9 142 79-221 10-192 (272)
35 KOG4609 Predicted phosphoglyce 99.2 1.3E-11 2.7E-16 102.0 5.0 77 79-163 92-172 (284)
36 cd07061 HP_HAP_like Histidine 98.0 1.6E-05 3.5E-10 67.2 6.4 58 82-151 4-73 (242)
37 PF00328 His_Phos_2: Histidine 97.0 0.00092 2E-08 58.3 4.9 44 108-151 62-116 (347)
38 KOG3720 Lysosomal & prostatic 96.4 0.0094 2E-07 54.8 7.0 70 82-151 36-127 (411)
39 PRK10172 phosphoanhydride phos 96.3 0.016 3.5E-07 53.6 7.9 70 82-151 36-130 (436)
40 PRK10173 glucose-1-phosphatase 96.0 0.031 6.8E-07 51.4 8.2 71 81-151 32-128 (413)
41 KOG1057 Arp2/3 complex-interac 91.9 0.18 4E-06 49.3 4.0 44 108-151 511-571 (1018)
42 PF13422 DUF4110: Domain of un 41.5 49 0.0011 24.2 3.9 23 198-220 13-35 (96)
43 KOG3672 Histidine acid phospha 35.2 63 0.0014 29.8 4.4 41 108-148 168-223 (487)
44 COG0161 BioA Adenosylmethionin 26.5 2.6E+02 0.0056 26.3 7.0 104 117-221 89-210 (449)
45 cd06257 DnaJ DnaJ domain or J- 24.5 1.7E+02 0.0038 17.7 4.7 47 167-217 7-53 (55)
46 KOG1382 Multiple inositol poly 24.0 1.2E+02 0.0026 28.5 4.3 44 108-151 132-182 (467)
No 1
>PRK13463 phosphatase PhoE; Provisional
Probab=100.00 E-value=4.9e-35 Score=242.98 Aligned_cols=140 Identities=26% Similarity=0.399 Sum_probs=132.7
Q ss_pred CcEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHhcCCCCEEEeCccHHHHHHHHHHHhcCCCCcccccc
Q 027556 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKSTAEILWQGRDEPLAFIDS 160 (222)
Q Consensus 81 ~~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~i~~~~~ 160 (222)
+++||||||||+.+|..++++|+.| .|||+.|++||+.+++.|+..+++.|||||+.||+|||+++++.+++++.++++
T Consensus 2 ~~~i~lvRHG~t~~n~~~~~~G~~d-~~Lt~~G~~Qa~~~~~~l~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~ 80 (203)
T PRK13463 2 KTTVYVTRHGETEWNVAKRMQGRKN-SALTENGILQAKQLGERMKDLSIHAIYSSPSERTLHTAELIKGERDIPIIADEH 80 (203)
T ss_pred ceEEEEEeCCCCccchhCcccCCCC-CCcCHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHHhcCCCCceECcC
Confidence 4889999999999999999999998 579999999999999999988999999999999999999999888899999999
Q ss_pred ccccccCccCCCCHHHHHhhChhHHhhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcC
Q 027556 161 LKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLTP 221 (222)
Q Consensus 161 L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~~~~~Rv~~~l~~l~~~~ 221 (222)
|+|+++|.|+|++.+++.+.||+.+..|+.++..+.+|+|||+.++.+|+..+|+++.+++
T Consensus 81 l~E~~~G~~eG~~~~e~~~~~p~~~~~~~~~~~~~~~~~gEs~~~~~~R~~~~l~~i~~~~ 141 (203)
T PRK13463 81 FYEINMGIWEGQTIDDIERQYPDDIQLFWNEPHLFQSTSGENFEAVHKRVIEGMQLLLEKH 141 (203)
T ss_pred ceeCCCCccCCCcHHHHhhhCHHHHHHHHhChhccCCCCCeEHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999998888899999999999999999999987653
No 2
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=100.00 E-value=2.7e-34 Score=237.54 Aligned_cols=138 Identities=24% Similarity=0.277 Sum_probs=130.4
Q ss_pred cEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHhcCCCCEEEeCccHHHHHHHHHHHhcCCCCccccccc
Q 027556 82 KKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKSTAEILWQGRDEPLAFIDSL 161 (222)
Q Consensus 82 ~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~i~~~~~L 161 (222)
|+||||||||+.+|..++++|+.|. |||+.|++||+.+++.|++.+++.|||||+.||+|||+++++.+++++.++++|
T Consensus 1 ~~i~lvRHG~t~~n~~~~~~G~~d~-pLt~~G~~Qa~~~~~~l~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~L 79 (199)
T PRK15004 1 MRLWLVRHGETQANVDGLYSGHAPT-PLTARGIEQAQNLHTLLRDVPFDLVLCSELERAQHTARLVLSDRQLPVHIIPEL 79 (199)
T ss_pred CeEEEEeCCCCccccCCcEeCCCCC-CcCHHHHHHHHHHHHHHhCCCCCEEEECchHHHHHHHHHHHhcCCCCceeChhh
Confidence 5799999999999999999999985 799999999999999999989999999999999999999999888899999999
Q ss_pred cccccCccCCCCHHHHHhhChhHHhhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHhc
Q 027556 162 KEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLT 220 (222)
Q Consensus 162 ~E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~~~~~Rv~~~l~~l~~~ 220 (222)
+|+++|.|+|++..++.+.+|+.+..|..++....+|+|||+.++..|+..+++++.+.
T Consensus 80 ~E~~~G~~eg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gEs~~~~~~Rv~~~l~~l~~~ 138 (199)
T PRK15004 80 NEMFFGDWEMRHHRDLMQEDAENYAAWCNDWQHAIPTNGEGFQAFSQRVERFIARLSAF 138 (199)
T ss_pred eeCCCcccCCCCHHHHHHHCHHHHHHHHhChhhcCCCCCcCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998999988877778899999999999999999999864
No 3
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=6.3e-34 Score=240.44 Aligned_cols=138 Identities=25% Similarity=0.414 Sum_probs=122.4
Q ss_pred CcEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHhc--CCCCEEEeCccHHHHHHHHHHHhcCC---CCc
Q 027556 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGRD---EPL 155 (222)
Q Consensus 81 ~~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~---~~i 155 (222)
|++|||||||||.+|..++++|+.|. |||+.|++||+.+++.|++ .++|.|||||+.||+|||++|++..+ +++
T Consensus 1 m~~l~LVRHGeT~~N~~~~~~G~~D~-pLt~~G~~QA~~l~~~L~~~~~~~d~i~sSpL~Ra~qTA~~i~~~~~~~~~~~ 79 (228)
T PRK14116 1 MAKLVLIRHGQSEWNLSNQFTGWVDV-DLSEKGVEEAKKAGRLIKEAGLEFDQAYTSVLTRAIKTLHYALEESDQLWIPE 79 (228)
T ss_pred CCEEEEEeCCCCCCccccCcCCCCCC-CcCHHHHHHHHHHHHHHHhcCCCCCEEEECChHHHHHHHHHHHHhcCcCCCCc
Confidence 47899999999999999999999995 7999999999999999984 67999999999999999999987643 678
Q ss_pred cccccccccccCccCCCCHHHHHhhChhH-HhhhhcCC------------------------CCCCCCCCCCHHHHHHHH
Q 027556 156 AFIDSLKEAHLFFLEGMKNVDARQKYPNE-YTTWREDP------------------------ANFNVNGVYPVRNLWGTA 210 (222)
Q Consensus 156 ~~~~~L~E~~~G~~eg~~~~ei~~~~p~~-~~~~~~~~------------------------~~~~~p~gES~~~~~~Rv 210 (222)
.++++|+|++||+|||++++++.+.+|+. +..|..+. ..+.+|+|||+.++.+|+
T Consensus 80 ~~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgGEs~~~~~~Rv 159 (228)
T PRK14116 80 TKTWRLNERHYGALQGLNKKETAEKYGDEQVHIWRRSYDVLPPLLDADDEGSAAKDRRYANLDPRIIPGGENLKVTLERV 159 (228)
T ss_pred ccCcccccccchhhcCCCHHHHHHHhhhhHHHHHhhcccccCcccccccccccccchhhhccCccCCCCCCCHHHHHHHH
Confidence 89999999999999999999999999976 56665431 134679999999999999
Q ss_pred HHHHHHHHh
Q 027556 211 REAWKEILL 219 (222)
Q Consensus 211 ~~~l~~l~~ 219 (222)
..+|++++.
T Consensus 160 ~~~l~~~i~ 168 (228)
T PRK14116 160 IPFWEDHIA 168 (228)
T ss_pred HHHHHHHHH
Confidence 999999763
No 4
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1e-33 Score=239.09 Aligned_cols=139 Identities=25% Similarity=0.357 Sum_probs=122.5
Q ss_pred CcEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHhc--CCCCEEEeCccHHHHHHHHHHHhcC---CCCc
Q 027556 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGR---DEPL 155 (222)
Q Consensus 81 ~~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~~--~~~~~i~sSpl~Ra~qTA~~i~~~~---~~~i 155 (222)
|++|||||||||.+|..++++|+.|. |||+.|++||+.+++.|+. ..+|.|||||++||+|||+++++.. ++++
T Consensus 1 m~~l~LvRHGeT~~N~~~~~~G~~D~-pLt~~G~~QA~~l~~~L~~~~~~~d~i~sSpL~Ra~~TA~~i~~~~~~~~~~~ 79 (228)
T PRK14119 1 MPKLILCRHGQSEWNAKNLFTGWEDV-NLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESKQQWIPV 79 (228)
T ss_pred CCEEEEEeCCCCCcccCCCccCCCCC-CcCHHHHHHHHHHHHHHHhcCCCCCEEEeCccHHHHHHHHHHHHhcccCCCCe
Confidence 47899999999999999999999995 7999999999999999984 5799999999999999999998754 3678
Q ss_pred cccccccccccCccCCCCHHHHHhhChhH-HhhhhcCCCC------------------------CCCCCCCCHHHHHHHH
Q 027556 156 AFIDSLKEAHLFFLEGMKNVDARQKYPNE-YTTWREDPAN------------------------FNVNGVYPVRNLWGTA 210 (222)
Q Consensus 156 ~~~~~L~E~~~G~~eg~~~~ei~~~~p~~-~~~~~~~~~~------------------------~~~p~gES~~~~~~Rv 210 (222)
.++++|+|++||+|+|++++++.+.||+. +..|..+... ..+|+|||+.++.+|+
T Consensus 80 ~~~~~LrE~~fG~weG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv 159 (228)
T PRK14119 80 YKSWRLNERHYGGLQGLNKDDARKEFGEEQVHIWRRSYDVKPPAETEEQREAYLADRRYNHLDKRMMPYSESLKDTLVRV 159 (228)
T ss_pred eECCCccccccccccCCcHHHHHHHccHHHHHHHHcccccCCCcccccccccccccccccccccccCCCCCCHHHHHHHH
Confidence 89999999999999999999999999976 5667644221 2368999999999999
Q ss_pred HHHHHHHHhc
Q 027556 211 REAWKEILLT 220 (222)
Q Consensus 211 ~~~l~~l~~~ 220 (222)
..+|++++..
T Consensus 160 ~~~l~~~~~~ 169 (228)
T PRK14119 160 IPFWTDHISQ 169 (228)
T ss_pred HHHHHHHHHh
Confidence 9999998754
No 5
>PRK01112 phosphoglyceromutase; Provisional
Probab=100.00 E-value=5.1e-33 Score=234.97 Aligned_cols=137 Identities=18% Similarity=0.242 Sum_probs=123.7
Q ss_pred CcEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHhcCCCCEEEeCccHHHHHHHHHHHhc----------
Q 027556 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKSTAEILWQG---------- 150 (222)
Q Consensus 81 ~~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~~~~~~~i~sSpl~Ra~qTA~~i~~~---------- 150 (222)
|++||||||||+.+|..++++|+.|. +||+.|++||+.++++|++.+++.|||||+.||+|||+++++.
T Consensus 1 M~~L~LvRHGqt~~n~~~~~~G~~D~-~Lte~G~~Qa~~l~~~L~~~~~d~iysSpl~Ra~qTA~~i~~~~~~~~~~~~~ 79 (228)
T PRK01112 1 MALLILLRHGQSVWNAKNLFTGWVDI-PLSQQGIAEAIAAGEKIKDLPIDCIFTSTLVRSLMTALLAMTNHSSGKIPYIV 79 (228)
T ss_pred CcEEEEEeCCCCccccccccCCCCCC-CcCHHHHHHHHHHHHHhhcCCCCEEEEcCcHHHHHHHHHHHHhhccccccccc
Confidence 58999999999999999999999995 7999999999999999999999999999999999999999742
Q ss_pred -------------------CCCCccccccccccccCccCCCCHHHHHhhChhHHhhhhcCCCCCCCCCCCCHHHHHHHHH
Q 027556 151 -------------------RDEPLAFIDSLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAR 211 (222)
Q Consensus 151 -------------------~~~~i~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~~~~~Rv~ 211 (222)
..+++..+++|+|++||+|+|++++++.+.+|..+..|+.++..+.+|+|||+.++.+|+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~E~~~G~~eG~~~~ei~~~~~~~~~~~w~~~~~~~~p~GES~~d~~~Rv~ 159 (228)
T PRK01112 80 HEEDDKKWMSRIYSDEEPEQMIPLFQSSALNERMYGELQGKNKAETAEKFGEEQVKLWRRSYKTAPPQGESLEDTGQRTL 159 (228)
T ss_pred ccccccccccccccccccccCCCeeecCccccccccccCCCCHHHHHHHCcHHHHHHHhCcCCCCCCCCCCHHHHHHHHH
Confidence 2356788999999999999999999999999877666556666788999999999999999
Q ss_pred HHHHHHH
Q 027556 212 EAWKEIL 218 (222)
Q Consensus 212 ~~l~~l~ 218 (222)
.+|++++
T Consensus 160 ~~l~~~~ 166 (228)
T PRK01112 160 PYFQNRI 166 (228)
T ss_pred HHHHHHH
Confidence 9999764
No 6
>PRK01295 phosphoglyceromutase; Provisional
Probab=100.00 E-value=6.8e-33 Score=230.82 Aligned_cols=138 Identities=26% Similarity=0.352 Sum_probs=122.9
Q ss_pred CcEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHh--cCCCCEEEeCccHHHHHHHHHHHhcCC---CCc
Q 027556 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKSTAEILWQGRD---EPL 155 (222)
Q Consensus 81 ~~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~--~~~~~~i~sSpl~Ra~qTA~~i~~~~~---~~i 155 (222)
.++||||||||+.+|..++++|+.|. |||+.|++||+.+++.|+ ..++|.|||||+.||+|||++|++.++ +++
T Consensus 2 ~~~i~LVRHGet~~n~~~~~~G~~d~-~Lt~~G~~qA~~~~~~L~~~~~~~d~i~sSpl~Ra~qTA~~i~~~~~~~~~~~ 80 (206)
T PRK01295 2 SRTLVLVRHGQSEWNLKNLFTGWRDP-DLTEQGVAEAKAAGRKLKAAGLKFDIAFTSALSRAQHTCQLILEELGQPGLET 80 (206)
T ss_pred CceEEEEeCCCCcccccCCcCCCCCC-CcCHHHHHHHHHHHHHHHhCCCCCCEEEeCCcHHHHHHHHHHHHHcCCCCCCe
Confidence 57899999999999999999999984 799999999999999998 467999999999999999999998875 788
Q ss_pred cccccccccccCccCCCCHHHHHhhChhHHhhhhcCCCCCCCCCCCCHHHHHHHHHHHH-HHHHh
Q 027556 156 AFIDSLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAW-KEILL 219 (222)
Q Consensus 156 ~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~~~~~Rv~~~l-~~l~~ 219 (222)
.++++|+|++||+|+|++.+++.+.+|+....|+.++..+.+|+|||+.++.+|+..++ +.++.
T Consensus 81 ~~~~~L~E~~~G~~eg~~~~e~~~~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv~~~~~~~i~~ 145 (206)
T PRK01295 81 IRDQALNERDYGDLSGLNKDDARAKWGEEQVHIWRRSYDVPPPGGESLKDTGARVLPYYLQEILP 145 (206)
T ss_pred EECCcccccccccccCCcHHHHHHHchHHHHHHhhcccCCCCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999876555445555688999999999999999974 55643
No 7
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=100.00 E-value=8.2e-33 Score=229.38 Aligned_cols=136 Identities=24% Similarity=0.233 Sum_probs=124.5
Q ss_pred EEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHhcCCCCEEEeCccHHHHHHHHHHHhcCCCCcccccccc
Q 027556 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKSTAEILWQGRDEPLAFIDSLK 162 (222)
Q Consensus 83 ~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~i~~~~~L~ 162 (222)
+||||||||+.+|..++++|+.|+.|||+.|++||+.+++.|++.+++.|||||+.||+|||+++++.+++++.++++|+
T Consensus 1 ~i~lvRHG~t~~n~~~~~~g~~~d~~Lt~~G~~qa~~l~~~l~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~L~ 80 (204)
T TIGR03848 1 TVILVRHGRSTANTAGTLAGRTPGVDLDERGREQAAALAERLADLPIAAIVSSPLERCRETAEPIAEARGLPPRVDERLG 80 (204)
T ss_pred CEEEEeCCCCCccccccccCCCCCCCcCHHHHHHHHHHHHHHhcCCCCEEEeCcHHHHHHHHHHHHHhcCCCceECcccc
Confidence 48999999999999999999996568999999999999999998899999999999999999999998889999999999
Q ss_pred ccccCccCCCCHHHHHhhChhHHhhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHhc
Q 027556 163 EAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLT 220 (222)
Q Consensus 163 E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~~~~~Rv~~~l~~l~~~ 220 (222)
|++||+|+|++++++.+. ..+..|..++..+.+|+|||+.++..|+..+++++.++
T Consensus 81 E~~~G~~eG~~~~e~~~~--~~~~~~~~~~~~~~~p~gEs~~~~~~R~~~~l~~~~~~ 136 (204)
T TIGR03848 81 ECDYGDWTGRELKELAKE--PLWPVVQAHPSAAVFPGGESLAQVQARAVAAVREHDAR 136 (204)
T ss_pred cCCCCeeCCcCHHHHhCc--HHHHHHhcCcccCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999998754 35667777777778999999999999999999998753
No 8
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=100.00 E-value=9e-33 Score=223.55 Aligned_cols=134 Identities=28% Similarity=0.397 Sum_probs=125.7
Q ss_pred EEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHhcCCCCEEEeCccHHHHHHHHHHHhcCCCCccccccccc
Q 027556 84 VTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKSTAEILWQGRDEPLAFIDSLKE 163 (222)
Q Consensus 84 i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~i~~~~~L~E 163 (222)
||||||||+.+|..+++ |+.| .|||+.|++||+.+++.|++..++.|||||+.||+|||++++..+++++.++++|+|
T Consensus 1 i~lvRHg~t~~n~~~~~-g~~d-~~Lt~~G~~qa~~l~~~l~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~L~E 78 (177)
T TIGR03162 1 LYLIRHGETDVNAGLCY-GQTD-VPLAEKGAEQAAALREKLADVPFDAVYSSPLSRCRELAEILAERRGLPIIKDPRLRE 78 (177)
T ss_pred CEEEeCCCCccCCCcee-CCCC-CCcChhHHHHHHHHHHHhcCCCCCEEEECchHHHHHHHHHHHhhcCCCceECCcccc
Confidence 69999999999999888 8888 579999999999999999988999999999999999999999988899999999999
Q ss_pred cccCccCCCCHHHHHhhChhHHhhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHhc
Q 027556 164 AHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLT 220 (222)
Q Consensus 164 ~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~~~~~Rv~~~l~~l~~~ 220 (222)
+++|.|+|++.+++.+.+| .+..|..++..+.+|+|||+.++.+|+..++++|.++
T Consensus 79 ~~~G~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~gEs~~~~~~R~~~~~~~l~~~ 134 (177)
T TIGR03162 79 MDFGDWEGRSWDEIPEAYP-ELDAWAADWQHARPPGGESFADFYQRVSEFLEELLKA 134 (177)
T ss_pred ccCCccCCCCHHHHHHhCH-HHHHHHhCcccCCCcCCCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998 6788888877788999999999999999999999865
No 9
>PRK14117 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.2e-32 Score=232.85 Aligned_cols=137 Identities=25% Similarity=0.364 Sum_probs=121.2
Q ss_pred CcEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHh--cCCCCEEEeCccHHHHHHHHHHHhc---CCCCc
Q 027556 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKSTAEILWQG---RDEPL 155 (222)
Q Consensus 81 ~~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~--~~~~~~i~sSpl~Ra~qTA~~i~~~---~~~~i 155 (222)
|++|||||||||.+|..++++|+.|. |||+.|++||+.+++.|+ ..+++.|||||+.||+|||++++.. .++++
T Consensus 1 m~~l~LvRHG~t~~n~~~~~qG~~D~-~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~~TA~~i~~~~~~~~~~~ 79 (230)
T PRK14117 1 MVKLVFARHGESEWNKANLFTGWADV-DLSEKGTQQAIDAGKLIKEAGIEFDLAFTSVLKRAIKTTNLALEASDQLWVPV 79 (230)
T ss_pred CCEEEEEeCccccCcccCCcCCCCCC-CcCHHHHHHHHHHHHHHHHcCCCCCEEEECCcHHHHHHHHHHHHhcccCCCCc
Confidence 58999999999999999999999995 799999999999999997 3689999999999999999998642 45788
Q ss_pred cccccccccccCccCCCCHHHHHhhChhH-HhhhhcC------------------------CCCCCCCCCCCHHHHHHHH
Q 027556 156 AFIDSLKEAHLFFLEGMKNVDARQKYPNE-YTTWRED------------------------PANFNVNGVYPVRNLWGTA 210 (222)
Q Consensus 156 ~~~~~L~E~~~G~~eg~~~~ei~~~~p~~-~~~~~~~------------------------~~~~~~p~gES~~~~~~Rv 210 (222)
.++++|+|++||.|||++++++.+.||+. +..|..+ ...+.+|+|||+.++.+|+
T Consensus 80 ~~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~GEs~~~~~~Rv 159 (230)
T PRK14117 80 EKSWRLNERHYGGLTGKNKAEAAEQFGDEQVHIWRRSYDVLPPAMAKDDEYSAHTDRRYASLDDSVIPDAENLKVTLERA 159 (230)
T ss_pred eeCCccccccchhhcCCCHHHHHHHccHHHHHHHhcccccCCCcccccccccccccccccccccCCCCCCCCHHHHHHHH
Confidence 89999999999999999999999999976 4556532 1234678999999999999
Q ss_pred HHHHHHHH
Q 027556 211 REAWKEIL 218 (222)
Q Consensus 211 ~~~l~~l~ 218 (222)
..+|++++
T Consensus 160 ~~~l~~~~ 167 (230)
T PRK14117 160 LPFWEDKI 167 (230)
T ss_pred HHHHHHHH
Confidence 99999976
No 10
>PRK03482 phosphoglycerate mutase; Provisional
Probab=100.00 E-value=1.6e-32 Score=229.40 Aligned_cols=139 Identities=25% Similarity=0.263 Sum_probs=122.3
Q ss_pred CcEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHhcCCCCEEEeCccHHHHHHHHHHHhcCCCCcccccc
Q 027556 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKSTAEILWQGRDEPLAFIDS 160 (222)
Q Consensus 81 ~~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~i~~~~~ 160 (222)
|++||||||||+.+|..++++|+.| .|||+.|++||+.+++.|+..+++.|||||+.||+|||+++++.+++++.++++
T Consensus 1 m~~i~lvRHG~t~~n~~~~~~g~~d-~~Lt~~G~~qA~~~~~~l~~~~~~~I~sSpl~Ra~qTA~~i~~~~~~~~~~~~~ 79 (215)
T PRK03482 1 MLQVYLVRHGETQWNAERRIQGQSD-SPLTAKGEQQAMQVAERAKELGITHIISSDLGRTRRTAEIIAQACGCDIIFDPR 79 (215)
T ss_pred CcEEEEEeCCCcccccccccCCCCC-CCcCHHHHHHHHHHHHHHhcCCCCEEEECCcHHHHHHHHHHHHhcCCCeeEChh
Confidence 5899999999999999999999988 579999999999999999988999999999999999999999999999999999
Q ss_pred ccccccCccCCCCHHHHHhhChhHHhhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHhc
Q 027556 161 LKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLT 220 (222)
Q Consensus 161 L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~~~~~Rv~~~l~~l~~~ 220 (222)
|+|+++|.|+|++++++...++.....+...+..+.+|+|||+.++..|+..+|+++++.
T Consensus 80 L~E~~~G~~eg~~~~~~~~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~Rv~~~l~~~~~~ 139 (215)
T PRK03482 80 LRELNMGVLEKRHIDSLTEEEEGWRRQLVNGTVDGRIPEGESMQELSDRMHAALESCLEL 139 (215)
T ss_pred ccccCCccccCCcHHHHHhhHHHHHHhhhcCCCccCCCCCccHHHHHHHHHHHHHHHHHh
Confidence 999999999999999887554322222333444567899999999999999999998754
No 11
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.6e-32 Score=231.79 Aligned_cols=137 Identities=26% Similarity=0.389 Sum_probs=120.4
Q ss_pred cEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHhc--CCCCEEEeCccHHHHHHHHHHHhcC---CCCcc
Q 027556 82 KKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGR---DEPLA 156 (222)
Q Consensus 82 ~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~~--~~~~~i~sSpl~Ra~qTA~~i~~~~---~~~i~ 156 (222)
|+|||||||||.+|..++++|+.|. |||+.|++||+.+++.|++ .+++.|||||+.||+|||++|++.. ++++.
T Consensus 1 m~l~LvRHG~t~~n~~~~~~G~~d~-~Lt~~G~~qa~~~~~~l~~~~~~~d~i~sSpl~Ra~~TA~~i~~~~~~~~~~~~ 79 (227)
T PRK14118 1 MELVFIRHGFSEWNAKNLFTGWRDV-NLTERGVEEAKAAGKKLKEAGYEFDIAFTSVLTRAIKTCNIVLEESNQLWIPQV 79 (227)
T ss_pred CEEEEEecCCCccccccCcCCCCCC-CCCHHHHHHHHHHHHHHHhcCCCCCEEEEeChHHHHHHHHHHHHhcCCCCCCee
Confidence 5799999999999999999999995 7999999999999999984 5799999999999999999998754 35788
Q ss_pred ccccccccccCccCCCCHHHHHhhChhH-HhhhhcCCC------------------------CCCCCCCCCHHHHHHHHH
Q 027556 157 FIDSLKEAHLFFLEGMKNVDARQKYPNE-YTTWREDPA------------------------NFNVNGVYPVRNLWGTAR 211 (222)
Q Consensus 157 ~~~~L~E~~~G~~eg~~~~ei~~~~p~~-~~~~~~~~~------------------------~~~~p~gES~~~~~~Rv~ 211 (222)
++++|+|++||+|||++++++.+.+|+. +..|..++. ...+|+|||+.++.+|+.
T Consensus 80 ~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~GEs~~~~~~Rv~ 159 (227)
T PRK14118 80 KNWRLNERHYGALQGLDKKATAEQYGDEQVHIWRRSYDTLPPDLDPQDPNSAHNDRRYAHLPADVVPDAENLKVTLERVL 159 (227)
T ss_pred cCCccccccCccccCCcHHHHHHHhhHHHHHHHHhccccCCCccccccccccccchhhccCcCCCCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999875 455654321 135789999999999999
Q ss_pred HHHHHHHh
Q 027556 212 EAWKEILL 219 (222)
Q Consensus 212 ~~l~~l~~ 219 (222)
.+|++++.
T Consensus 160 ~~l~~~~~ 167 (227)
T PRK14118 160 PFWEDQIA 167 (227)
T ss_pred HHHHHHHh
Confidence 99999764
No 12
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
Probab=100.00 E-value=2.7e-32 Score=226.39 Aligned_cols=141 Identities=35% Similarity=0.464 Sum_probs=133.9
Q ss_pred CCcEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHh--cCCCCEEEeCccHHHHHHHHHHHhcCCCCccc
Q 027556 80 YPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKSTAEILWQGRDEPLAF 157 (222)
Q Consensus 80 ~~~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~--~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~i~~ 157 (222)
++++|||||||||.+|..++++|+.| .|||+.|++||+.+++.|+ +..++.|||||+.||+|||+++++.++.++.+
T Consensus 1 ~~~~i~lvRHGqt~~n~~~~~~G~~d-~pLt~~G~~QA~~l~~~l~~~~~~~~~i~sS~l~Ra~~TA~~~a~~~~~~~~~ 79 (208)
T COG0406 1 MMMRLYLVRHGETEWNVEGRLQGWTD-SPLTEEGRAQAEALAERLAARDIGFDAIYSSPLKRAQQTAEPLAEELGLPLEV 79 (208)
T ss_pred CceEEEEEecCCccccccccccCCCC-CCCCHHHHHHHHHHHHHHhhcCCCCCEEEECchHHHHHHHHHHHHhcCCCcee
Confidence 36899999999999999999999777 4799999999999999999 67899999999999999999999999999999
Q ss_pred cccccccccCccCCCCHHHHHhhChhHHhhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcC
Q 027556 158 IDSLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLTP 221 (222)
Q Consensus 158 ~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~~~~~Rv~~~l~~l~~~~ 221 (222)
+++|+|+++|+|+|++.+++.+.+|..+..|..++..+.+|+|||+.++..|+..+++++...+
T Consensus 80 ~~~l~E~~~G~~eg~~~~e~~~~~p~~~~~~~~~~~~~~~~~gEs~~~~~~R~~~~~~~~~~~~ 143 (208)
T COG0406 80 DDRLREIDFGDWEGLTIDELAEEPPEELAAWLADPYLAPPPGGESLADVSKRVVAALAELLRSP 143 (208)
T ss_pred cCCeeEeecccccCCcHHHHHHhCHHHHHHHhcCccccCCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999989999999999999999999999998764
No 13
>PRK14120 gpmA phosphoglyceromutase; Provisional
Probab=99.98 E-value=1.3e-31 Score=229.17 Aligned_cols=139 Identities=23% Similarity=0.324 Sum_probs=121.9
Q ss_pred cCCCcEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHhc--CCCCEEEeCccHHHHHHHHHHHhcC---C
Q 027556 78 ISYPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGR---D 152 (222)
Q Consensus 78 ~~~~~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~~--~~~~~i~sSpl~Ra~qTA~~i~~~~---~ 152 (222)
+++|++|||||||||.+|..++++|+.|. |||+.|++||+.+++.|+. ..++.|||||+.||+|||+++++.. +
T Consensus 1 ~~~m~~i~LVRHGqt~~n~~~~~~G~~D~-pLTe~G~~QA~~~a~~l~~~~~~~~~IysSpl~Ra~qTA~~i~~~~~~~~ 79 (249)
T PRK14120 1 MMMTYTLVLLRHGESEWNAKNLFTGWVDV-DLTEKGEAEAKRGGELLAEAGVLPDVVYTSLLRRAIRTANLALDAADRLW 79 (249)
T ss_pred CCCCcEEEEEeCCCCcccccCCcCCCCCC-CcCHHHHHHHHHHHHHHHhcCCCCCEEEecChHHHHHHHHHHHHhcccCC
Confidence 35679999999999999999999999995 7999999999999999984 4689999999999999999997643 4
Q ss_pred CCccccccccccccCccCCCCHHHHHhhChhH-HhhhhcCCCCC----------------------CCCCCCCHHHHHHH
Q 027556 153 EPLAFIDSLKEAHLFFLEGMKNVDARQKYPNE-YTTWREDPANF----------------------NVNGVYPVRNLWGT 209 (222)
Q Consensus 153 ~~i~~~~~L~E~~~G~~eg~~~~ei~~~~p~~-~~~~~~~~~~~----------------------~~p~gES~~~~~~R 209 (222)
+++.++++|+|++||.|+|++.+++.++||.. +..|..++... .+|+|||+.++.+|
T Consensus 80 ~~i~~~~~L~E~~fG~~eG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~d~~~~~~~~~p~GES~~~~~~R 159 (249)
T PRK14120 80 IPVRRSWRLNERHYGALQGKDKAETKAEYGEEQFMLWRRSYDTPPPPIEDGSEYSQDNDPRYADLGVGPRTECLKDVVAR 159 (249)
T ss_pred CCeEECCCcccccccccCCCCHHHHHHHccHHHHHHHHhccccCCCccccccccccccCccccccCCCCCCCCHHHHHHH
Confidence 67889999999999999999999999999974 77787643221 14899999999999
Q ss_pred HHHHHHHH
Q 027556 210 AREAWKEI 217 (222)
Q Consensus 210 v~~~l~~l 217 (222)
+..+|+++
T Consensus 160 v~~~l~~~ 167 (249)
T PRK14120 160 FLPYWEDD 167 (249)
T ss_pred HHHHHHHH
Confidence 99999985
No 14
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1. Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically.
Probab=99.97 E-value=1.7e-31 Score=227.90 Aligned_cols=137 Identities=26% Similarity=0.406 Sum_probs=120.4
Q ss_pred cEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHhc--CCCCEEEeCccHHHHHHHHHHHhcCC---CCcc
Q 027556 82 KKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGRD---EPLA 156 (222)
Q Consensus 82 ~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~---~~i~ 156 (222)
|+|||||||||.+|..++++|+.|. +||+.|++||+.+++.|+. ..++.|||||++||+|||+++++.++ +++.
T Consensus 1 ~~l~lVRHGqt~~n~~~~~~G~~D~-~Lt~~G~~QA~~la~~L~~~~~~~d~iysSpl~Ra~qTA~ii~~~~~~~~~~i~ 79 (245)
T TIGR01258 1 MKLVLVRHGESEWNALNLFTGWVDV-KLSEKGQQEAKRAGELLKEEGYEFDVAYTSLLKRAIHTLNIALDELDQLWIPVK 79 (245)
T ss_pred CEEEEEeCCCcCccccCCcCCCCCC-CcCHHHHHHHHHHHHHHHhcCCCCCEEEEcChHHHHHHHHHHHHhcCCCCCCee
Confidence 5799999999999999999999985 7999999999999999974 57899999999999999999998776 5778
Q ss_pred ccccccccccCccCCCCHHHHHhhChhH-HhhhhcCCC------------------CC------CCCCCCCHHHHHHHHH
Q 027556 157 FIDSLKEAHLFFLEGMKNVDARQKYPNE-YTTWREDPA------------------NF------NVNGVYPVRNLWGTAR 211 (222)
Q Consensus 157 ~~~~L~E~~~G~~eg~~~~ei~~~~p~~-~~~~~~~~~------------------~~------~~p~gES~~~~~~Rv~ 211 (222)
++++|+|++||+|+|++++++.+.||.. +..|..+.. .+ .+|+|||+.++.+|+.
T Consensus 80 ~~~~L~E~~~G~~eG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~d~~y~~~~~~~~p~GES~~~~~~Rv~ 159 (245)
T TIGR01258 80 KSWRLNERHYGALQGLNKAETAAKYGEEQVNIWRRSFDVPPPPIDESDPRSPHNDPRYAHLDPKVLPLTESLKDTIARVL 159 (245)
T ss_pred eCcccccccCCCCcCCCHHHHHHHhhHHHHHHHHhhccCCCCcCCcccccccccChhhhcCCcccCCCCCCHHHHHHHHH
Confidence 8999999999999999999999999875 555654311 11 2689999999999999
Q ss_pred HHHHHHHh
Q 027556 212 EAWKEILL 219 (222)
Q Consensus 212 ~~l~~l~~ 219 (222)
.+|++++.
T Consensus 160 ~~l~~l~~ 167 (245)
T TIGR01258 160 PYWNDEIA 167 (245)
T ss_pred HHHHHHHh
Confidence 99999864
No 15
>PRK14115 gpmA phosphoglyceromutase; Provisional
Probab=99.97 E-value=4.1e-31 Score=225.82 Aligned_cols=137 Identities=28% Similarity=0.443 Sum_probs=120.6
Q ss_pred cEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHhc--CCCCEEEeCccHHHHHHHHHHHhcCC---CCcc
Q 027556 82 KKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGRD---EPLA 156 (222)
Q Consensus 82 ~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~---~~i~ 156 (222)
|+|||||||||.+|..++++|+.|. |||+.|++||+.+++.|+. .+++.|||||+.||+|||++|++.++ +++.
T Consensus 1 ~~i~LVRHGqt~~n~~~~~~G~~D~-pLte~G~~QA~~la~~L~~~~~~~d~IysSpl~Ra~qTA~~i~~~~~~~~~~~~ 79 (247)
T PRK14115 1 TKLVLIRHGESQWNKENRFTGWTDV-DLSEKGVSEAKAAGKLLKEEGYTFDVAYTSVLKRAIRTLWIVLDELDQMWLPVE 79 (247)
T ss_pred CEEEEEECCCcccccccCcCCCCCC-CcCHHHHHHHHHHHHHHHhcCCCCCEEEEcCCHHHHHHHHHHHHHcCCCCCCce
Confidence 5799999999999999999999995 7999999999999999984 57899999999999999999988776 4788
Q ss_pred ccccccccccCccCCCCHHHHHhhChhH-HhhhhcCCC------------------------CCCCCCCCCHHHHHHHHH
Q 027556 157 FIDSLKEAHLFFLEGMKNVDARQKYPNE-YTTWREDPA------------------------NFNVNGVYPVRNLWGTAR 211 (222)
Q Consensus 157 ~~~~L~E~~~G~~eg~~~~ei~~~~p~~-~~~~~~~~~------------------------~~~~p~gES~~~~~~Rv~ 211 (222)
++++|+|++||+|+|++++++.+.+|.. +..|..... ...+|+|||+.++..|+.
T Consensus 80 ~~~~L~E~~fG~~eG~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv~ 159 (247)
T PRK14115 80 KSWRLNERHYGALQGLNKAETAAKYGDEQVKIWRRSYDVPPPALEKDDERYPGHDPRYAKLPEEELPLTESLKDTIARVL 159 (247)
T ss_pred ECccccccccccccCCCHHHHHHHhhHHHHHHHhcccccCCCcccccccccccccchhhcccCCCCCCCCcHHHHHHHHH
Confidence 9999999999999999999999999875 556654311 134789999999999999
Q ss_pred HHHHHHHh
Q 027556 212 EAWKEILL 219 (222)
Q Consensus 212 ~~l~~l~~ 219 (222)
.+|++++.
T Consensus 160 ~~l~~~i~ 167 (247)
T PRK14115 160 PYWNETIA 167 (247)
T ss_pred HHHHHHHH
Confidence 99998753
No 16
>PRK13462 acid phosphatase; Provisional
Probab=99.97 E-value=4.2e-31 Score=219.60 Aligned_cols=130 Identities=29% Similarity=0.383 Sum_probs=115.4
Q ss_pred CCcEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHhcCCCC--EEEeCccHHHHHHHHHHHhcCCCCc-c
Q 027556 80 YPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFD--QCFSSPICRAKSTAEILWQGRDEPL-A 156 (222)
Q Consensus 80 ~~~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~~~~~~--~i~sSpl~Ra~qTA~~i~~~~~~~i-~ 156 (222)
+|++|||||||||.+|..++++|+.|. |||+.|++||+.+++.|+..+++ .|||||+.||+|||+++ +.++ .
T Consensus 4 ~~~~i~LvRHG~t~~n~~~~~~G~~d~-pLt~~G~~QA~~l~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i----~~~~~~ 78 (203)
T PRK13462 4 RNHRLLLLRHGETEWSKSGRHTGRTEL-ELTETGRTQAELAGQALGELELDDPLVISSPRRRALDTAKLA----GLTVDE 78 (203)
T ss_pred cccEEEEEeCCCCCcccCCCccCCCCC-CCCHHHHHHHHHHHHHHHhCCCCCCEEEECchHHHHHHHHHh----cCcccc
Confidence 579999999999999999999999995 79999999999999999977777 79999999999999988 2333 6
Q ss_pred ccccccccccCccCCCCHHHHHhhChhHHhhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHhc
Q 027556 157 FIDSLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLT 220 (222)
Q Consensus 157 ~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~~~~~Rv~~~l~~l~~~ 220 (222)
++++|+|++||.|+|++.+++.+.+|+ +..|. ..+|+|||+.++.+|+..++++++++
T Consensus 79 ~~~~LrE~~~G~~eG~~~~ei~~~~~~-~~~~~-----~~~p~gES~~~~~~Rv~~~l~~i~~~ 136 (203)
T PRK13462 79 VSGLLAEWDYGSYEGLTTPQIRESEPD-WLVWT-----HGCPGGESVAQVNERADRAVALALEH 136 (203)
T ss_pred cCccccccCCccccCCcHHHHHHhCch-HHhhc-----CCCCCCccHHHHHHHHHHHHHHHHHh
Confidence 799999999999999999999999886 44453 34589999999999999999998765
No 17
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional
Probab=99.97 E-value=1.7e-30 Score=233.76 Aligned_cols=141 Identities=26% Similarity=0.312 Sum_probs=131.6
Q ss_pred cCCCcEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHhcC-CCCEEEeCccHHHHHHHHHHHhcCCCCcc
Q 027556 78 ISYPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNI-YFDQCFSSPICRAKSTAEILWQGRDEPLA 156 (222)
Q Consensus 78 ~~~~~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~~~-~~~~i~sSpl~Ra~qTA~~i~~~~~~~i~ 156 (222)
...+++|||||||++.+|..++++|+.|. +||+.|++||+.+++.|+.. +++.|||||+.||+|||+++++.++.++.
T Consensus 168 ~~~~~~i~LvRHGet~~n~~~~~~g~~D~-~Lt~~G~~QA~~l~~~l~~~~~~d~i~sSpl~Ra~qTA~~i~~~~~~~~~ 246 (372)
T PRK07238 168 RGTPTRLLLLRHGQTELSVQRRYSGRGNP-ELTEVGRRQAAAAARYLAARGGIDAVVSSPLQRARDTAAAAAKALGLDVT 246 (372)
T ss_pred CCCceEEEEEeCCCCCcccCCeeeCCCCC-CcCHHHHHHHHHHHHHHhccCCCCEEEECChHHHHHHHHHHHHhcCCCcE
Confidence 45679999999999999999999999984 79999999999999999977 89999999999999999999998888999
Q ss_pred ccccccccccCccCCCCHHHHHhhChhHHhhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHhc
Q 027556 157 FIDSLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLT 220 (222)
Q Consensus 157 ~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~~~~~Rv~~~l~~l~~~ 220 (222)
++++|+|+++|+|+|++.+++.+.||..+..|..++ .+.+|+|||+.++.+|+..++++|...
T Consensus 247 ~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~w~~~~-~~~~p~gEs~~~~~~Rv~~~l~~l~~~ 309 (372)
T PRK07238 247 VDDDLIETDFGAWEGLTFAEAAERDPELHRAWLADT-SVAPPGGESFDAVARRVRRARDRLIAE 309 (372)
T ss_pred ECccceeCCCCccCCCCHHHHHHHCHHHHHHHHhCC-CCCCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998876 567899999999999999999998764
No 18
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=99.97 E-value=9.9e-31 Score=205.89 Aligned_cols=136 Identities=32% Similarity=0.471 Sum_probs=127.1
Q ss_pred EEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHh--cCCCCEEEeCccHHHHHHHHHHHhcCCCCcccccc
Q 027556 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKSTAEILWQGRDEPLAFIDS 160 (222)
Q Consensus 83 ~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~--~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~i~~~~~ 160 (222)
+|||||||++.+|..++++|+.|. |||+.|++||+.+++.|. ..+++.|||||+.||+|||+++++.++.++.+++.
T Consensus 1 ~i~liRHg~~~~n~~~~~~~~~d~-~Lt~~G~~qA~~~~~~l~~~~~~~~~i~~Sp~~R~~qTA~~~~~~~~~~~~~~~~ 79 (158)
T PF00300_consen 1 RIYLIRHGESEFNAEGRVQGDSDP-PLTERGREQARQLGEYLAERDIQIDVIYSSPLRRCIQTAEIIAEGLGIEIIVDPR 79 (158)
T ss_dssp EEEEEE-S-BHHHHTTBCGTTSST-GBEHHHHHHHHHHHHHHHHTTSSCSEEEEESSHHHHHHHHHHHHHHTSEEEEEGG
T ss_pred CEEEEECCccccccCCCcCCCCCc-cccHHHHHHHHhhcccccccccCceEEecCCcchhhhhhchhhcccccccccccc
Confidence 699999999999999999999985 799999999999999998 78999999999999999999999988899999999
Q ss_pred ccccccCccCCCCHHHHHhhChhHHhhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 027556 161 LKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILL 219 (222)
Q Consensus 161 L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~~~~~Rv~~~l~~l~~ 219 (222)
|+|+++|.|+|.+..++.+.++..+..|..++..+.+|+|||+.++..|+..+++.|..
T Consensus 80 l~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~ 138 (158)
T PF00300_consen 80 LREIDFGDWEGRPFDEIEEKFPDEFEAWWSDPYFYRPPGGESWEDFQQRVKQFLDELIA 138 (158)
T ss_dssp GSCCGCGGGTTSBHHHHHHHHHHHHHHHHHHTSSCGSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchhhcccchhhHHhhhhcccchhhccccccccccCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998888999888888999999999999999999999984
No 19
>smart00855 PGAM Phosphoglycerate mutase family. Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.
Probab=99.97 E-value=1.4e-29 Score=200.91 Aligned_cols=132 Identities=30% Similarity=0.364 Sum_probs=117.4
Q ss_pred EEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHhc---CCCCEEEeCccHHHHHHHHHHHhcCCCCccccc
Q 027556 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN---IYFDQCFSSPICRAKSTAEILWQGRDEPLAFID 159 (222)
Q Consensus 83 ~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~~---~~~~~i~sSpl~Ra~qTA~~i~~~~~~~i~~~~ 159 (222)
+|||||||++.+|..+.+.|..| .|||+.|++||+.+++.|.. ..++.|||||+.||+|||+++++.++.+ .+++
T Consensus 1 ~i~lvRHG~s~~n~~~~~~g~~d-~~Lt~~G~~qa~~~a~~l~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~-~~~~ 78 (155)
T smart00855 1 RLYLIRHGETEANREGRLTGWTD-SPLTELGRAQAEALGELLASLGRLRFDVIYSSPLLRARETAEALAIALGLG-EVDP 78 (155)
T ss_pred CEEEEeCCCCcccccCeEcCCCC-CCCCHHHHHHHHHHHHHHHhccCCCCCEEEeCchHHHHHHHHHHHHhcCCC-CCCh
Confidence 58999999999998888888865 58999999999999999985 5899999999999999999999888765 4889
Q ss_pred cccccccCccCCCCHHHHHhhChhHHhhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHhc
Q 027556 160 SLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLT 220 (222)
Q Consensus 160 ~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~~~~~Rv~~~l~~l~~~ 220 (222)
.|+|+++|.|+|++.+++.+.+|..+..| ..+.+|+|||+.++..|+..+++++.++
T Consensus 79 ~L~E~~~G~~~g~~~~~~~~~~~~~~~~~----~~~~~~~gEs~~~~~~Rv~~~~~~i~~~ 135 (155)
T smart00855 79 RLRERDYGAWEGLTKEEERAKAWTRPADW----LGAAPPGGESLADVVERLVRALEELIAT 135 (155)
T ss_pred hhhhcccceecCCcHHHHHHHHHHHHhcc----CCCCCcCCCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999988877655444 4578899999999999999999999764
No 20
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.96 E-value=7.9e-29 Score=237.57 Aligned_cols=138 Identities=20% Similarity=0.158 Sum_probs=125.0
Q ss_pred CCcEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHhcC---CCCEEEeCccHHHHHHHHHHHhc------
Q 027556 80 YPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNI---YFDQCFSSPICRAKSTAEILWQG------ 150 (222)
Q Consensus 80 ~~~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~~~---~~~~i~sSpl~Ra~qTA~~i~~~------ 150 (222)
.+|+|||||||||.+|..++++| | .|||+.|++||+.++++|++. .++.|||||+.||+|||+++.+.
T Consensus 418 ~~m~i~LiRHGeT~~n~~~r~~G--d-~pLt~~G~~qA~~l~~~l~~~~~~~~~~V~sSpl~Ra~~TA~~i~~~~~~~~~ 494 (664)
T PTZ00322 418 TPMNLYLTRAGEYVDLLSGRIGG--N-SRLTERGRAYSRALFEYFQKEISTTSFTVMSSCAKRCTETVHYFAEESILQQS 494 (664)
T ss_pred CCceEEEEecccchhhhcCccCC--C-CccCHHHHHHHHHHHHHHHhccCCCCcEEEcCCcHHHHHHHHHHHhccccccc
Confidence 45789999999999999999998 5 479999999999999999853 46799999999999999999753
Q ss_pred -----------CCCCccccccccccccCccCCCCHHHHHhhChhHHhhhhcCCCCCCCCCCCCHHHHH-HHHHHHHHHHH
Q 027556 151 -----------RDEPLAFIDSLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLW-GTAREAWKEIL 218 (222)
Q Consensus 151 -----------~~~~i~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~~~~-~Rv~~~l~~l~ 218 (222)
+++++.++++|+|++||.|||++++++.+.||+.+..|..++..+.+|+|||+.|+. .|+..++++|.
T Consensus 495 ~~~~a~~~~~~~~~~~~~~~~L~Ei~fG~wEG~t~~ei~~~~p~~~~~~~~d~~~~~~P~GES~~d~~~~R~~~~i~~l~ 574 (664)
T PTZ00322 495 TASAASSQSPSLNCRVLYFPTLDDINHGDCEGQLLSDVRRTMPNTLQSMKADPYYTAWPNGECIHQVFNARLEPHIHDIQ 574 (664)
T ss_pred cccccccccccccccccchhhhCcCCCcccCCCCHHHHHHhCcHHHHHHHhCCCcCCCCCCcCHHHHHHHHHHHHHHHHH
Confidence 456788999999999999999999999999999999999999999999999999976 79999999986
Q ss_pred hc
Q 027556 219 LT 220 (222)
Q Consensus 219 ~~ 220 (222)
..
T Consensus 575 ~~ 576 (664)
T PTZ00322 575 AS 576 (664)
T ss_pred cc
Confidence 43
No 21
>KOG0235 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.95 E-value=4.5e-28 Score=201.05 Aligned_cols=142 Identities=30% Similarity=0.455 Sum_probs=125.9
Q ss_pred CCCcEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHh--cCCCCEEEeCccHHHHHHHHHHHhcCC---C
Q 027556 79 SYPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKSTAEILWQGRD---E 153 (222)
Q Consensus 79 ~~~~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~--~~~~~~i~sSpl~Ra~qTA~~i~~~~~---~ 153 (222)
+...+++|||||||+||.+++++|+.|+ +||+.|.+||..+++.|. +..++.+|||++.||+|||+.+.+..+ +
T Consensus 3 ~~~~~lvlvRHGes~wN~e~~~~G~~D~-~Lte~G~~qA~~~~~~l~~~~~~~~~~~tS~l~RakqT~~~il~~~~~~~~ 81 (214)
T KOG0235|consen 3 SNTFRLVLVRHGESEWNKENIFQGWIDA-PLTEKGEEQAKAAAQRLKDLNIEFDVCYTSDLKRAKQTAELILEELKQKKV 81 (214)
T ss_pred CcceEEEEEecCchhhhhhCcccccccC-ccChhhHHHHHHHHHHHHhcCCcccEEecCHHHHHHHHHHHHHHhhccCCc
Confidence 3468999999999999999999999997 799999999999999998 566889999999999999999999886 7
Q ss_pred CccccccccccccCccCCCCHHHHHhhChhH--HhhhhcCC-CCCCCCCCCCHHHHHHHHHHHHHHHHhcC
Q 027556 154 PLAFIDSLKEAHLFFLEGMKNVDARQKYPNE--YTTWREDP-ANFNVNGVYPVRNLWGTAREAWKEILLTP 221 (222)
Q Consensus 154 ~i~~~~~L~E~~~G~~eg~~~~ei~~~~p~~--~~~~~~~~-~~~~~p~gES~~~~~~Rv~~~l~~l~~~~ 221 (222)
++..+.+|+|++||+++|+...++.+.++.. +..|.... ....+|.|||+.++.+|+..+|++.+..+
T Consensus 82 pv~~~~~L~ER~yG~l~Gl~~~e~~~~~g~~~~~~~~r~~~~~~~~~p~~EsL~~~~~R~~~~~~e~i~~~ 152 (214)
T KOG0235|consen 82 PVLYTWRLNERHYGDLQGLNKRETAKRYGEEQVYEDPRLSDLDEIPLPDGESLKDCLDRLLPFWNEEIAKE 152 (214)
T ss_pred ceEechhhchhhhccccCccHHHHHHHcchhccccchhhccCCcCCCCCCccHHHHHHHHHHHHHHhhhhh
Confidence 8999999999999999999999999999976 45555433 33457899999999999999999877543
No 22
>PTZ00123 phosphoglycerate mutase like-protein; Provisional
Probab=99.92 E-value=1.2e-24 Score=184.68 Aligned_cols=124 Identities=25% Similarity=0.384 Sum_probs=106.7
Q ss_pred CCCCCCccCCCCCccCCHHHHHHHHHHHHHHh--cCCCCEEEeCccHHHHHHHHHHHhcCC---CCccccccccccccCc
Q 027556 94 WNDEGRVQGSSNLSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKSTAEILWQGRD---EPLAFIDSLKEAHLFF 168 (222)
Q Consensus 94 ~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~--~~~~~~i~sSpl~Ra~qTA~~i~~~~~---~~i~~~~~L~E~~~G~ 168 (222)
+|..++++|+.|. |||+.|++||+.+++.|+ +.+++.|||||+.||+|||+++++.++ +++.++++|+|+++|.
T Consensus 1 ~N~~~~~qG~~D~-pLTe~G~~QA~~l~~~L~~~~~~~d~iysSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~L~E~~~G~ 79 (236)
T PTZ00123 1 WNKENRFTGWTDV-PLSEKGVQEAREAGKLLKEKGFRFDVVYTSVLKRAIKTAWIVLEELGQLHVPVIKSWRLNERHYGA 79 (236)
T ss_pred CcccCceeCCCCC-CCCHHHHHHHHHHHHHHHhcCCCCCEEEECChHHHHHHHHHHHHhcCCCCCCceeCchhhhccccc
Confidence 5788999999995 799999999999999997 468999999999999999999998765 5778899999999999
Q ss_pred cCCCCHHHHHhhChhH-HhhhhcCCC------------------------CCCCCCCCCHHHHHHHHHHHHHHHH
Q 027556 169 LEGMKNVDARQKYPNE-YTTWREDPA------------------------NFNVNGVYPVRNLWGTAREAWKEIL 218 (222)
Q Consensus 169 ~eg~~~~ei~~~~p~~-~~~~~~~~~------------------------~~~~p~gES~~~~~~Rv~~~l~~l~ 218 (222)
|+|++++++.+.+|.. +..|..+.. .+.+|+|||+.++.+|+..+|++++
T Consensus 80 ~EG~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gES~~~~~~Rv~~~l~~li 154 (236)
T PTZ00123 80 LQGLNKSETAEKHGEEQVKIWRRSYDIPPPPLEKSDERYPGNDPVYKDIPKDALPNTECLKDTVERVLPYWEDHI 154 (236)
T ss_pred ccCCCHHHHHHHccHHHHHHHhcccCCCCCCcccccccccccchhhhccccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999976 344442211 1245899999999999999999865
No 23
>COG0588 GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism]
Probab=99.91 E-value=3e-24 Score=176.12 Aligned_cols=138 Identities=26% Similarity=0.385 Sum_probs=122.6
Q ss_pred CcEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHh--cCCCCEEEeCccHHHHHHHHHHHhcC---CCCc
Q 027556 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKSTAEILWQGR---DEPL 155 (222)
Q Consensus 81 ~~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~--~~~~~~i~sSpl~Ra~qTA~~i~~~~---~~~i 155 (222)
|++++|+||||++||..+++.||.|. +||+.|++||...|+.|+ +..||.+|||-++||++|+.++.+.. .+++
T Consensus 1 ~~~Lvl~RHGqSeWN~~NlFtGW~Dv-~LtekG~~EA~~ag~llk~~~~~~dia~TS~L~RAi~T~~i~L~e~d~~~ipv 79 (230)
T COG0588 1 MMKLVLLRHGQSEWNKENLFTGWVDV-DLTEKGISEAKAAGKLLKEEGLEFDIAYTSVLKRAIKTLNIVLEESDQLWIPV 79 (230)
T ss_pred CceEEEEecCchhhhhcCceeeeeec-CcchhhHHHHHHHHHHHHHcCCCcceeehHHHHHHHHHHHHHhhhhcccCcch
Confidence 57899999999999999999999996 699999999999999998 58999999999999999999998876 6788
Q ss_pred cccccccccccCccCCCCHHHHHhhChhH-HhhhhcCCCCCCCC-------------------------CCCCHHHHHHH
Q 027556 156 AFIDSLKEAHLFFLEGMKNVDARQKYPNE-YTTWREDPANFNVN-------------------------GVYPVRNLWGT 209 (222)
Q Consensus 156 ~~~~~L~E~~~G~~eg~~~~ei~~~~p~~-~~~~~~~~~~~~~p-------------------------~gES~~~~~~R 209 (222)
....+|+|++||.++|...++..++|.++ +..|.+... ..|| .+||+.++.+|
T Consensus 80 ~kswrLNERhYG~LqGlnK~~t~~kyGeeqv~~wRRsyd-i~PP~~~~~~~~~~~~d~ry~~~~~~~~p~~EsLkdt~~R 158 (230)
T COG0588 80 IKSWRLNERHYGALQGLNKAETAAKYGEEQVLIWRRSYD-IPPPKLEKDDERSPHRDRRYAHLDIGGLPLTESLKDTVER 158 (230)
T ss_pred hhHHHhhhhhhhhhhcCChHHHHHHHhHHHHHHHHHhcC-CCCCCcccccccccccccccccccccCCCccchHHHHHHH
Confidence 89999999999999999999999999876 667776542 3333 45999999999
Q ss_pred HHHHHHHHHhc
Q 027556 210 AREAWKEILLT 220 (222)
Q Consensus 210 v~~~l~~l~~~ 220 (222)
+..+|++.+..
T Consensus 159 v~Pyw~~~I~p 169 (230)
T COG0588 159 VLPYWEDDIAP 169 (230)
T ss_pred hhHHHHHHhhH
Confidence 99999987643
No 24
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=99.81 E-value=1.2e-19 Score=159.13 Aligned_cols=116 Identities=25% Similarity=0.227 Sum_probs=88.2
Q ss_pred CCcEEEEEccCCCCCCCCCCccCCCCC--ccCCHHHHHHHHHHHHHHhcC--------CCCEEEeCccHHHHHHHHHHHh
Q 027556 80 YPKKVTLVRHGLSSWNDEGRVQGSSNL--SVLTEAGVRQAERCRKALRNI--------YFDQCFSSPICRAKSTAEILWQ 149 (222)
Q Consensus 80 ~~~~i~LvRHGet~~n~~~~~~g~~d~--~pLT~~G~~Qa~~l~~~L~~~--------~~~~i~sSpl~Ra~qTA~~i~~ 149 (222)
..++||||||||+.++ ++.|+ .+||+.|++||+.+++.|++. .++.|||||+.||+|||++|++
T Consensus 101 ~~~~L~LVRHGq~~~~------~~~d~~~~~LTe~G~~QA~~lg~~L~~~~~~~~~~~~~d~IysSPL~RA~qTAeiIa~ 174 (299)
T PTZ00122 101 HQRQIILVRHGQYINE------SSNDDNIKRLTELGKEQARITGKYLKEQFGEILVDKKVKAIYHSDMTRAKETAEIISE 174 (299)
T ss_pred ceeEEEEEECCCCCCC------CCCCcccCCCCHHHHHHHHHHHHHHHHhhccccccCCCCEEEEcCcHHHHHHHHHHHH
Confidence 3489999999996543 23443 349999999999999999864 8999999999999999999998
Q ss_pred cC-CCCccccccccccccCccCCCCHHHHHhhChhHHhhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcC
Q 027556 150 GR-DEPLAFIDSLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLTP 221 (222)
Q Consensus 150 ~~-~~~i~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~~~~~Rv~~~l~~l~~~~ 221 (222)
.+ ++++.++++|+|. ++..+. | ....+.++++|+ .++.+|+..++++++.++
T Consensus 175 ~~~~~~v~~d~~LrEG-------~~~~~~----~--------~~~~~~~~gee~-~~~~~Rv~~al~~i~~r~ 227 (299)
T PTZ00122 175 AFPGVRLIEDPNLAEG-------VPCAPD----P--------PSRGFKPTIEEI-LEDMKRIEAAFEKYFHRP 227 (299)
T ss_pred hCCCCCceeCcccccC-------CccccC----c--------cccccCCCcchH-HHHHHHHHHHHHHHHHhc
Confidence 76 5789999999992 222110 1 011244555555 677999999999987643
No 25
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos
Probab=99.80 E-value=3.1e-19 Score=140.56 Aligned_cols=80 Identities=44% Similarity=0.645 Sum_probs=73.0
Q ss_pred EEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHhcC--CCCEEEeCccHHHHHHHHHHHhcC-CCCccccc
Q 027556 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNI--YFDQCFSSPICRAKSTAEILWQGR-DEPLAFID 159 (222)
Q Consensus 83 ~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~~~--~~~~i~sSpl~Ra~qTA~~i~~~~-~~~i~~~~ 159 (222)
+|||||||++.+|......+..| +|||+.|++||+.+++.|... .++.|||||+.||+|||+++++.+ +.++.+++
T Consensus 1 ~i~liRHg~~~~~~~~~~~~~~d-~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~~Sp~~Ra~qTa~~l~~~~~~~~~~~~~ 79 (153)
T cd07067 1 RLYLVRHGESEWNAEGRFQGWTD-VPLTEKGREQARALGKRLKELGIKFDRIYSSPLKRAIQTAEIILEELPGLPVEVDP 79 (153)
T ss_pred CEEEEECCCCcccccCcccCCCC-CCCCHHHHHHHHHHHHHHHhcCCCCCEEEECcHHHHHHHHHHHHHhcCCCCceeCc
Confidence 58999999999988777677777 579999999999999999865 899999999999999999999987 78899999
Q ss_pred cccc
Q 027556 160 SLKE 163 (222)
Q Consensus 160 ~L~E 163 (222)
.|+|
T Consensus 80 ~L~e 83 (153)
T cd07067 80 RLRE 83 (153)
T ss_pred cchH
Confidence 9999
No 26
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent Hi
Probab=99.69 E-value=1.2e-16 Score=124.92 Aligned_cols=77 Identities=43% Similarity=0.543 Sum_probs=67.0
Q ss_pred EEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHhcC--CCCEEEeCccHHHHHHHHHHHhcC--CCCcccc
Q 027556 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNI--YFDQCFSSPICRAKSTAEILWQGR--DEPLAFI 158 (222)
Q Consensus 83 ~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~~~--~~~~i~sSpl~Ra~qTA~~i~~~~--~~~i~~~ 158 (222)
+|||||||++.++..+.+.+..| .|||+.|++||..+++.|+.. .++.|||||+.||+|||++++..+ +.++..+
T Consensus 1 ~i~liRHg~~~~~~~~~~~~~~d-~~Lt~~G~~qa~~l~~~l~~~~~~~~~v~sSp~~R~~~Ta~~~~~~~~~~~~~~~~ 79 (153)
T cd07040 1 VLYLVRHGEREPNAEGRFTGWGD-GPLTEKGRQQARELGKALRERYIKFDRIYSSPLKRAIQTAEIILEGLFEGLPVEVD 79 (153)
T ss_pred CEEEEeCCCCccccCCCccCCCC-CCcCHHHHHHHHHHHHHHHHhCCCCCEEEECChHHHHHHHHHHHHHhcCCCCeEEC
Confidence 48999999999988877777888 579999999999999999865 899999999999999999999987 5555555
Q ss_pred cc
Q 027556 159 DS 160 (222)
Q Consensus 159 ~~ 160 (222)
+.
T Consensus 80 ~~ 81 (153)
T cd07040 80 PR 81 (153)
T ss_pred HH
Confidence 54
No 27
>KOG0234 consensus Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase [Carbohydrate transport and metabolism]
Probab=99.69 E-value=1.1e-16 Score=144.15 Aligned_cols=136 Identities=26% Similarity=0.301 Sum_probs=118.1
Q ss_pred CCcEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHh-cCCCC-EEEeCccHHHHHHHHHHHhcCCCCccc
Q 027556 80 YPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALR-NIYFD-QCFSSPICRAKSTAEILWQGRDEPLAF 157 (222)
Q Consensus 80 ~~~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~-~~~~~-~i~sSpl~Ra~qTA~~i~~~~~~~i~~ 157 (222)
....|||.||||++.|..++..|. ++|++.|.+-|+.+.+++. ....+ .||||++.||+|||+.+.-. ..+..
T Consensus 238 ~pR~i~l~r~geS~~n~~griggd---s~ls~~g~~ya~~l~~f~~~~~~~dl~vwts~~~rti~ta~~l~~~--~~~~~ 312 (438)
T KOG0234|consen 238 TPRTIYLTRHGESEFNVEGRIGGD---SPLSERGSQYAKSLIKFVEEQSSSDLDVWTSQRKRTIQTAEGLKLD--YSVEQ 312 (438)
T ss_pred CCceEEEEecCCCccccccccCCc---ccccHHHHHHHHHHHHHHhhhcccCceeccchHHHHhhhHhhcCcc--hhhhh
Confidence 468999999999999999887654 4699999999999999987 33455 89999999999999944222 22577
Q ss_pred cccccccccCccCCCCHHHHHhhChhHHhhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHhc
Q 027556 158 IDSLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLT 220 (222)
Q Consensus 158 ~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~~~~~Rv~~~l~~l~~~ 220 (222)
...|+|++.|.++|++.+++...||+.+.....++..+++|+|||+.|+..|+...+.+|..+
T Consensus 313 ~~~Ldei~ag~~~g~t~eeI~~~~p~e~~~r~~dky~yry~~gESy~D~v~RlePvImElEr~ 375 (438)
T KOG0234|consen 313 WKALDEIDAGVCEGLTYEEIETNYPEEFALRDKDKYRYRYPGGESYSDLVQRLEPVIMELERQ 375 (438)
T ss_pred HhhcCcccccccccccHHHHHHhCchhhhhccCCcceeecCCCCCHHHHHHhhhhHhHhhhhc
Confidence 889999999999999999999999999998889999999999999999999999998887543
No 28
>PRK06193 hypothetical protein; Provisional
Probab=99.69 E-value=4e-16 Score=129.70 Aligned_cols=82 Identities=24% Similarity=0.296 Sum_probs=70.3
Q ss_pred cchhhhhhhcCCCcEEEEEccCCCCCCCCCCccCCCC----CccCCHHHHHHHHHHHHHHh--cCCCCEEEeCccHHHHH
Q 027556 69 ATKSLTQKLISYPKKVTLVRHGLSSWNDEGRVQGSSN----LSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKS 142 (222)
Q Consensus 69 ~~~~~~~~~~~~~~~i~LvRHGet~~n~~~~~~g~~d----~~pLT~~G~~Qa~~l~~~L~--~~~~~~i~sSpl~Ra~q 142 (222)
+.+......+....+|||||||++++|..+.+.|+.| ++|||++|++||..++++|+ +..+|.|||||+.||+|
T Consensus 30 ~~~~~~~~~l~~~~~L~LvRHGet~~n~~~~~~gd~d~~~~~rpLt~~G~~qA~~l~~~L~~~~~~~d~V~sSpl~Ra~q 109 (206)
T PRK06193 30 ADDKTLLESLQKGGYVIYFRHAATDRSQADQDTSDMDDCSTQRNLSEEGREQARAIGEAFRALAIPVGKVISSPYCRAWE 109 (206)
T ss_pred ccchHHHHHHhcCCEEEEEeCccCCCCccCCcccccccCcCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHH
Confidence 3444556678889999999999999988887777764 36899999999999999998 46799999999999999
Q ss_pred HHHHHHhc
Q 027556 143 TAEILWQG 150 (222)
Q Consensus 143 TA~~i~~~ 150 (222)
||++++..
T Consensus 110 TA~il~~~ 117 (206)
T PRK06193 110 TAQLAFGR 117 (206)
T ss_pred HHHHHhcc
Confidence 99998754
No 29
>KOG4754 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.67 E-value=2.8e-16 Score=129.02 Aligned_cols=142 Identities=20% Similarity=0.182 Sum_probs=105.2
Q ss_pred cCCCcEEEEEccCCCCCCCCCCcc-------CCCCCccCCHHHHHHHHHHHHHHh--cC--CCCEEEeCccHHHHHHHHH
Q 027556 78 ISYPKKVTLVRHGLSSWNDEGRVQ-------GSSNLSVLTEAGVRQAERCRKALR--NI--YFDQCFSSPICRAKSTAEI 146 (222)
Q Consensus 78 ~~~~~~i~LvRHGet~~n~~~~~~-------g~~d~~pLT~~G~~Qa~~l~~~L~--~~--~~~~i~sSpl~Ra~qTA~~ 146 (222)
..+.++||||||||..+|+.+.-. .+.| +.||+.|++|+.++++.+. ++ .++.|++|||+||+||+.+
T Consensus 11 ~~r~KtiyLvRHgQg~HNV~g~~~h~ay~s~~~fD-~~LTplG~~Qv~~l~~~~~A~qL~~~ieliv~SPMrRtLqT~v~ 89 (248)
T KOG4754|consen 11 KNRCKTIYLVRHGQGIHNVAGEEDHKAYWSEDYFD-PHLTPLGWKQVDNLRKHLMAKQLPNKIELIVVSPMRRTLQTMVI 89 (248)
T ss_pred cCcceEEEEEeccccccccCcccchhhhhhhhccc-cccCHHHHHHHHHHhhhhhhhhcCCceeEEEechHHHHHHHHHH
Confidence 456799999999999999885321 1234 6799999999999999986 34 4999999999999999999
Q ss_pred HHhcC-------CCCccccccc----cccccCcc---CCCCHHHHHhhChhH-Hhhhhc-CCCCCCCCCCCCHHHHHHHH
Q 027556 147 LWQGR-------DEPLAFIDSL----KEAHLFFL---EGMKNVDARQKYPNE-YTTWRE-DPANFNVNGVYPVRNLWGTA 210 (222)
Q Consensus 147 i~~~~-------~~~i~~~~~L----~E~~~G~~---eg~~~~ei~~~~p~~-~~~~~~-~~~~~~~p~gES~~~~~~Rv 210 (222)
.+... ..++.+.|.+ +|- .|++ .+.+..+.++.||.. |..-.. ..+.+.+--.|+..+...|-
T Consensus 90 ~f~~~~~e~g~~~~p~~vsp~~i~~~rE~-lG~hpCD~r~~v~~~~~lfp~~DFs~~~~dv~~~~~pdy~ed~e~~a~r~ 168 (248)
T KOG4754|consen 90 AFGGYLAEDGEDPAPVKVSPPFIAVCRET-LGDHPCDRRSSVTDLMKLFPAYDFSLCETDVDPLKKPDYREDDEESAARS 168 (248)
T ss_pred HhcceeccCCCcCCceeecchHHHHHHHH-hCCCcccccchhHHHHhhcccccceeeccCcchhccCcchhhHHHHHHhH
Confidence 88754 2366677777 772 4554 355688888888843 111111 12233444579999999999
Q ss_pred HHHHHHHHhcC
Q 027556 211 REAWKEILLTP 221 (222)
Q Consensus 211 ~~~l~~l~~~~ 221 (222)
+.+++++..++
T Consensus 169 re~~~~l~~r~ 179 (248)
T KOG4754|consen 169 REFLEWLAKRP 179 (248)
T ss_pred HHHHHHHHhCc
Confidence 99999988764
No 30
>TIGR00249 sixA phosphohistidine phosphatase SixA.
Probab=99.67 E-value=2.4e-16 Score=125.38 Aligned_cols=68 Identities=25% Similarity=0.375 Sum_probs=59.7
Q ss_pred cEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHhc--CCCCEEEeCccHHHHHHHHHHHhcCCCC
Q 027556 82 KKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGRDEP 154 (222)
Q Consensus 82 ~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~~~ 154 (222)
|+|||||||+++++.. ++.| +|||+.|++||+.++++|++ ..+|.|||||+.||+|||+++++.++.+
T Consensus 1 m~l~LvRHg~a~~~~~----~d~d-r~Lt~~G~~qa~~~~~~l~~~~~~~d~i~sSp~~Ra~qTa~~l~~~~~~~ 70 (152)
T TIGR00249 1 MQLFIMRHGDAALDAA----SDSV-RPLTTNGCDESRLVAQWLKGQGVEIERILVSPFVRAEQTAEIVGDCLNLP 70 (152)
T ss_pred CEEEEEeCCCcccccC----CCCC-CCcCHHHHHHHHHHHHHHHhCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 5899999999988754 4555 68999999999999999985 5789999999999999999999987654
No 31
>PRK10848 phosphohistidine phosphatase; Provisional
Probab=99.67 E-value=3e-16 Score=125.77 Aligned_cols=68 Identities=24% Similarity=0.350 Sum_probs=58.5
Q ss_pred cEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHhc--CCCCEEEeCccHHHHHHHHHHHhcCCCC
Q 027556 82 KKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGRDEP 154 (222)
Q Consensus 82 ~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~~~ 154 (222)
|+|||||||++.+|.. ++.| +|||++|++||+.++++|+. ..+|.|||||+.||+|||+++++.++.+
T Consensus 1 m~l~lvRHg~a~~~~~----~d~~-rpLt~~G~~qa~~~~~~l~~~~~~~d~i~sSp~~Ra~qTa~~l~~~~~~~ 70 (159)
T PRK10848 1 MQVFIMRHGDAALDAA----SDSV-RPLTTCGCDESRLMANWLKGQKVDIERVLVSPYLRAEQTLEVVGECLNLP 70 (159)
T ss_pred CEEEEEeCCCCCCCCC----CCcC-CCcCHHHHHHHHHHHHHHHhCCCCCCEEEECCHHHHHHHHHHHHHHhCCC
Confidence 5799999999988742 3344 68999999999999999984 5689999999999999999999887654
No 32
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=99.64 E-value=1.1e-15 Score=126.27 Aligned_cols=88 Identities=19% Similarity=0.098 Sum_probs=69.2
Q ss_pred cCCCcEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHhcC-CCCEEEeCccHHHHHHHHHHHhcCCCCcc
Q 027556 78 ISYPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNI-YFDQCFSSPICRAKSTAEILWQGRDEPLA 156 (222)
Q Consensus 78 ~~~~~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~~~-~~~~i~sSpl~Ra~qTA~~i~~~~~~~i~ 156 (222)
....++||||||||+.....+ .+..|.+|||+.|++||+.++++|++. ..|.|||||+.||+|||++++. +.++.
T Consensus 51 ~~~~~~L~LiRHGet~~~~~~--~~~sD~RpLTerG~~qA~~lg~~L~~~~~~d~I~sSpa~Ra~qTAe~ia~--~~~v~ 126 (201)
T PRK15416 51 AKQHPVVVLFRHAERCDRSDN--QCLSDKTGITVKGTQDARELGKAFSADIPDYDLYSSNTVRTIQSATWFSA--GKKLT 126 (201)
T ss_pred hcCCCEEEEEeCccccCccCC--CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCCHHHHHHHHHHhc--CCCcE
Confidence 345688999999998322111 122334689999999999999999853 3479999999999999999987 45788
Q ss_pred ccccccccccCcc
Q 027556 157 FIDSLKEAHLFFL 169 (222)
Q Consensus 157 ~~~~L~E~~~G~~ 169 (222)
++++|+|.+.+.+
T Consensus 127 ~~~~Lye~~~~~~ 139 (201)
T PRK15416 127 VDKRLSDCGNGIY 139 (201)
T ss_pred ecHHHhhcCchhH
Confidence 8999999987754
No 33
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=99.63 E-value=9.9e-16 Score=122.61 Aligned_cols=69 Identities=32% Similarity=0.390 Sum_probs=60.3
Q ss_pred CcEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHh--cCCCCEEEeCccHHHHHHHHHHHhcCC
Q 027556 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKSTAEILWQGRD 152 (222)
Q Consensus 81 ~~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~--~~~~~~i~sSpl~Ra~qTA~~i~~~~~ 152 (222)
||+|||+|||++.+...+. .+. ++|||++|+++++.+|++|+ +..+|.|+|||+.||+|||+++++.++
T Consensus 1 m~~L~LmRHgkA~~~~~~~--~D~-dR~Lt~~G~~ea~~~a~~L~~~~~~~D~VL~Spa~Ra~QTae~v~~~~~ 71 (163)
T COG2062 1 MMRLYLMRHGKAEWAAPGI--ADF-DRPLTERGRKEAELVAAWLAGQGVEPDLVLVSPAVRARQTAEIVAEHLG 71 (163)
T ss_pred CceEEEeecccccccCCCC--CCc-cCcCCHHHHHHHHHHHHHHHhcCCCCCEEEeChhHHHHHHHHHHHHhhC
Confidence 6899999999999876541 123 48899999999999999999 456899999999999999999999987
No 34
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.51 E-value=1.1e-13 Score=118.47 Aligned_cols=142 Identities=17% Similarity=0.091 Sum_probs=101.9
Q ss_pred CCCcEEEEEccCCCCCCCCCC------------c------------------cCCCCCccCCHHHHHHHHHHHHHHh--c
Q 027556 79 SYPKKVTLVRHGLSSWNDEGR------------V------------------QGSSNLSVLTEAGVRQAERCRKALR--N 126 (222)
Q Consensus 79 ~~~~~i~LvRHGet~~n~~~~------------~------------------~g~~d~~pLT~~G~~Qa~~l~~~L~--~ 126 (222)
.....|++|||||...+..+. + .|..-++|||..|.-|++.+|+.|. +
T Consensus 10 ~~~~~i~vmRHgERvD~if~~~W~~~~~~~~~~y~~~d~n~p~~l~qr~~~~~~y~~d~pit~~g~~~~~~~gr~l~~a~ 89 (272)
T KOG3734|consen 10 DVPRNIFVMRHGERVDNIFGKLWLKTCARPDGKYVPDDMNMPFRLPQRIRSPKGYPIDPPITVSGFIQCKLIGRELLNAG 89 (272)
T ss_pred CCCceEEEEEcccccccccchhhhhhhcCCCCCcCCCCccCCccccccccCcccCccCCCccchhHHHHHHHHHHHHhcC
Confidence 346899999999987643221 1 1222357899999999999999986 6
Q ss_pred CCCCEEEeCccHHHHHHHHHHHhcCC----CCccccccccccccCc----cC-CCCHHHHHhhChhHHhhhhcCCCCCCC
Q 027556 127 IYFDQCFSSPICRAKSTAEILWQGRD----EPLAFIDSLKEAHLFF----LE-GMKNVDARQKYPNEYTTWREDPANFNV 197 (222)
Q Consensus 127 ~~~~~i~sSpl~Ra~qTA~~i~~~~~----~~i~~~~~L~E~~~G~----~e-g~~~~ei~~~~p~~~~~~~~~~~~~~~ 197 (222)
..++.||+||..||+|||..+.+.++ +.+.++|+|-|+..-. +. -.+..++....+.....+.... ...+
T Consensus 90 ~~i~~ifcSPs~r~VqTa~~i~~~~g~e~~~~i~vePgL~e~~~~~~~~~~p~~is~~el~~~~~~VD~~y~P~~-~~~~ 168 (272)
T KOG3734|consen 90 IAIDVIFCSPSLRCVQTAAKIKKGLGIEKKLKIRVEPGLFEPEKWPKDGKFPFFISPDELKFPGFPVDLNYDPVY-KETP 168 (272)
T ss_pred CCcceeecCCchhHHHHHHHHHHhhchhcCeeEEecchhcchhhhcccCCCCCcCCHHHHhccCCCcccccchhh-hhcc
Confidence 88999999999999999999998877 6899999999985322 11 1334455443332211111111 1235
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhcC
Q 027556 198 NGVYPVRNLWGTAREAWKEILLTP 221 (222)
Q Consensus 198 p~gES~~~~~~Rv~~~l~~l~~~~ 221 (222)
-.+||.+++..|+..+++.|++++
T Consensus 169 ~~~es~e~~~~R~~~~~k~i~~k~ 192 (272)
T KOG3734|consen 169 RWGESLEDCNDRIQKVFKAIADKY 192 (272)
T ss_pred cccccHHHHHHHHHHHHHHHHHhc
Confidence 578999999999999999998764
No 35
>KOG4609 consensus Predicted phosphoglycerate mutase [General function prediction only]
Probab=99.22 E-value=1.3e-11 Score=101.96 Aligned_cols=77 Identities=32% Similarity=0.385 Sum_probs=63.1
Q ss_pred CCCcEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHh--cCCCCEEEeCccHHHHHHHHHHHhcCC--CC
Q 027556 79 SYPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKSTAEILWQGRD--EP 154 (222)
Q Consensus 79 ~~~~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~--~~~~~~i~sSpl~Ra~qTA~~i~~~~~--~~ 154 (222)
.....|+||||||-. .. |..+ .||+.|++||+.+|++|+ ++++|.|+.|.|.||.+||.+|.++++ +.
T Consensus 92 katRhI~LiRHgeY~--~~----g~~~--hLTelGReQAE~tGkRL~elglk~d~vv~StM~RA~ETadIIlk~l~d~lk 163 (284)
T KOG4609|consen 92 KATRHIFLIRHGEYH--VD----GSLE--HLTELGREQAELTGKRLAELGLKFDKVVASTMVRATETADIILKHLPDDLK 163 (284)
T ss_pred hhhceEEEEecccee--cc----Cchh--hcchhhHHHHHHHhHHHHHcCCchhhhhhhhhhhhHHHHHHHHHhCCCccc
Confidence 356899999999843 22 3344 499999999999999998 789999999999999999999999985 34
Q ss_pred ccccccccc
Q 027556 155 LAFIDSLKE 163 (222)
Q Consensus 155 i~~~~~L~E 163 (222)
.+-.+.|+|
T Consensus 164 ~~s~~ll~E 172 (284)
T KOG4609|consen 164 RVSCPLLRE 172 (284)
T ss_pred eeccccccc
Confidence 455666766
No 36
>cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been
Probab=97.98 E-value=1.6e-05 Score=67.15 Aligned_cols=58 Identities=26% Similarity=0.131 Sum_probs=48.0
Q ss_pred cEEEEEccCCCCCCCCCCccCCCCCccCCHHHHHHHHHHHHHHhc-----C-------CCCEEEeCccHHHHHHHHHHHh
Q 027556 82 KKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN-----I-------YFDQCFSSPICRAKSTAEILWQ 149 (222)
Q Consensus 82 ~~i~LvRHGet~~n~~~~~~g~~d~~pLT~~G~~Qa~~l~~~L~~-----~-------~~~~i~sSpl~Ra~qTA~~i~~ 149 (222)
+.++++|||+..- ..||..|++|+..+|++|+. . ..-.|++|+..||+|||+.++.
T Consensus 4 ~v~~~~RHg~r~p------------~~LT~~G~~q~~~~G~~lr~~y~~~~~~~~~~~~~~~~~ss~~~Rt~~Sa~~~~~ 71 (242)
T cd07061 4 QVQVLSRHGDRYP------------GELTPFGRQQAFELGRYFRQRYGELLLLHSYNRSDLYIRSSDSQRTLQSAQAFLA 71 (242)
T ss_pred EEEEEEecCCCCc------------hhhhHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEEECCCcHHHHHHHHHHH
Confidence 5678999998632 24999999999999999982 1 1227999999999999999988
Q ss_pred cC
Q 027556 150 GR 151 (222)
Q Consensus 150 ~~ 151 (222)
.+
T Consensus 72 gl 73 (242)
T cd07061 72 GL 73 (242)
T ss_pred hc
Confidence 76
No 37
>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Acid phosphatases (3.1.3.2 from EC) are a heterogeneous group of proteins that hydrolyse phosphate esters, optimally at low pH. It has been shown [] that a number of acid phosphatases, from both prokaryotes and eukaryotes, share two regions of sequence similarity, each centred around a conserved histidine residue. These two histidines seem to be involved in the enzymes' catalytic mechanism [, ]. The first histidine is located in the N-terminal section and forms a phosphohistidine intermediate while the second is located in the C-terminal section and possibly acts as proton donor. Enzymes belonging to this family are called 'histidine acid phosphatases' and include: Escherichia coli pH 2.5 acid phosphatase (gene appA). E. coli glucose-1-phosphatase (3.1.3.10 from EC) (gene agp). Yeast constitutive and repressible acid phosphatases (genes PHO3 and PHO5). Schizosaccharomyces pombe acid phosphatase (gene pho1). Aspergillus awamori phytases A and B (3.1.3.8 from EC) (gene phyA and phyB). Mammalian lysosomal and prostatic acid phosphatase. Several Caenorhabditis elegans hypothetical proteins. ; GO: 0003993 acid phosphatase activity; PDB: 1DKN_A 1DKQ_A 1DKL_B 1DKP_A 1DKM_A 1DKO_A 2GFI_B 3IT1_B 3IT0_B 3IT3_B ....
Probab=97.02 E-value=0.00092 Score=58.34 Aligned_cols=44 Identities=27% Similarity=0.210 Sum_probs=37.0
Q ss_pred cCCHHHHHHHHHHHHHHhc----C-------CCCEEEeCccHHHHHHHHHHHhcC
Q 027556 108 VLTEAGVRQAERCRKALRN----I-------YFDQCFSSPICRAKSTAEILWQGR 151 (222)
Q Consensus 108 pLT~~G~~Qa~~l~~~L~~----~-------~~~~i~sSpl~Ra~qTA~~i~~~~ 151 (222)
.||+.|.+|...+|++|+. + .--.|+|+...||++||+.+...+
T Consensus 62 ~LT~~G~~q~~~lG~~lr~~Y~~l~~~~~~~~~v~vrSt~~~Rt~~Sa~af~~Gl 116 (347)
T PF00328_consen 62 QLTPRGMEQHYQLGKRLRERYPGLFPDNYNPEQVYVRSTNKQRTIQSAQAFLQGL 116 (347)
T ss_dssp SBTHHHHHHHHHHHHHHHHHHHTSSTSSS-TTTEEEEEESSHHHHHHHHHHHHHH
T ss_pred cccchhhhHHHHHHHHHHHHHHHhccccccccceeEEEeccchHHHHHHHHHHHH
Confidence 4999999999999999982 1 122699999999999999988764
No 38
>KOG3720 consensus Lysosomal & prostatic acid phosphatases [Lipid transport and metabolism]
Probab=96.41 E-value=0.0094 Score=54.79 Aligned_cols=70 Identities=19% Similarity=0.160 Sum_probs=48.1
Q ss_pred cEEEEEccCCCC-----CCCCCCcc---CCCCCccCCHHHHHHHHHHHHHHhc---C--C-----C----CEEEeCccHH
Q 027556 82 KKVTLVRHGLSS-----WNDEGRVQ---GSSNLSVLTEAGVRQAERCRKALRN---I--Y-----F----DQCFSSPICR 139 (222)
Q Consensus 82 ~~i~LvRHGet~-----~n~~~~~~---g~~d~~pLT~~G~~Qa~~l~~~L~~---~--~-----~----~~i~sSpl~R 139 (222)
..-.+.|||.-. +..+.... +-.....||+.|.+|+.++|++|++ . + + -.|.||+.-|
T Consensus 36 fv~~i~RHGdRaP~~~~yp~dp~~~~~~~~~G~GqLT~~G~~Q~~~LG~~LR~rYvr~~~fL~~~y~~~ev~iRStd~nR 115 (411)
T KOG3720|consen 36 FVQVIFRHGDRAPVDTPYPLDPFKEEDFWPRGWGQLTDRGMEQMFELGRFLRKRYVRYGNFLSPKYNPKEVYIRSTDVNR 115 (411)
T ss_pred EEEEEeecCCCCcccCCCCCCcccccccCCCCcchhhHHHHHHHHHHHHHHHHHHhhccccCCcccCcceEEEecCCccH
Confidence 667799999643 11111110 1111234999999999999999984 1 1 1 1688999999
Q ss_pred HHHHHHHHHhcC
Q 027556 140 AKSTAEILWQGR 151 (222)
Q Consensus 140 a~qTA~~i~~~~ 151 (222)
|+.||+.+...+
T Consensus 116 tl~SAqs~laGl 127 (411)
T KOG3720|consen 116 TLMSAQSVLAGL 127 (411)
T ss_pred HHHHHHHHHHhh
Confidence 999999887764
No 39
>PRK10172 phosphoanhydride phosphorylase; Provisional
Probab=96.31 E-value=0.016 Score=53.59 Aligned_cols=70 Identities=19% Similarity=0.149 Sum_probs=46.0
Q ss_pred cEEEEEccCCCCCC---C--C----CCccCC-CCCccCCHHHHHHHHHHHHHHhc------C-------CCC--EEEeCc
Q 027556 82 KKVTLVRHGLSSWN---D--E----GRVQGS-SNLSVLTEAGVRQAERCRKALRN------I-------YFD--QCFSSP 136 (222)
Q Consensus 82 ~~i~LvRHGet~~n---~--~----~~~~g~-~d~~pLT~~G~~Qa~~l~~~L~~------~-------~~~--~i~sSp 136 (222)
+.++|.|||-..-. . . ..+.-| .....||.+|..|...+|++++. + ..+ .|++++
T Consensus 36 ~Vvil~RHG~RaP~~~~~~~~~~t~~~w~~W~~~~GqLT~~G~~~~~~lG~~lR~rY~~~~lL~~~~c~~~~~v~v~a~~ 115 (436)
T PRK10172 36 SVVIVSRHGVRAPTKATQLMQDVTPDAWPQWPVKLGWLTPRGGELVTLLGHYQRQRLVADGLLAAKGCPQPGQVAAIADV 115 (436)
T ss_pred EEEEEeeCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEeCC
Confidence 66889999953211 0 0 111111 11234999999999999998872 1 111 578888
Q ss_pred cHHHHHHHHHHHhcC
Q 027556 137 ICRAKSTAEILWQGR 151 (222)
Q Consensus 137 l~Ra~qTA~~i~~~~ 151 (222)
..||+.||+.+...+
T Consensus 116 ~~RTi~SAqafl~Gl 130 (436)
T PRK10172 116 DQRTRKTGEAFLAGL 130 (436)
T ss_pred chHHHHHHHHHHHhc
Confidence 899999998886654
No 40
>PRK10173 glucose-1-phosphatase/inositol phosphatase; Provisional
Probab=96.01 E-value=0.031 Score=51.43 Aligned_cols=71 Identities=15% Similarity=0.107 Sum_probs=47.4
Q ss_pred CcEEEEEccCCCCCCCC----------CCcc-CCCCCccCCHHHHHHHHHHHHHHhc------C-------CC--CEEEe
Q 027556 81 PKKVTLVRHGLSSWNDE----------GRVQ-GSSNLSVLTEAGVRQAERCRKALRN------I-------YF--DQCFS 134 (222)
Q Consensus 81 ~~~i~LvRHGet~~n~~----------~~~~-g~~d~~pLT~~G~~Qa~~l~~~L~~------~-------~~--~~i~s 134 (222)
.+.++|.|||-..--.. ..+. .......||.+|..+...+|++++. + .. -.||+
T Consensus 32 ~~vvilsRHg~R~P~~~~~~~l~~~t~~~Wp~w~~~~G~LT~~G~~~~~~~G~~~r~~~~~~~ll~~~~cp~~~~v~~~a 111 (413)
T PRK10173 32 QQVLMMSRHNLRAPLANNGSVLEQSTPNAWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAQQGLVKSGECPPPDTVYAYA 111 (413)
T ss_pred EEEEEEeecccCCCCCCcchhhhhcCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcCeEEEEe
Confidence 36799999994321111 0111 1112234999999999999998762 1 11 26899
Q ss_pred CccHHHHHHHHHHHhcC
Q 027556 135 SPICRAKSTAEILWQGR 151 (222)
Q Consensus 135 Spl~Ra~qTA~~i~~~~ 151 (222)
++..||++||+.+...+
T Consensus 112 ~~~~RT~~Sa~afl~Gl 128 (413)
T PRK10173 112 NSLQRTVATAQFFITGA 128 (413)
T ss_pred CCchHHHHHHHHHHHhc
Confidence 99999999999887664
No 41
>KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton]
Probab=91.94 E-value=0.18 Score=49.31 Aligned_cols=44 Identities=30% Similarity=0.195 Sum_probs=37.6
Q ss_pred cCCHHHHHHHHHHHHHHhcC-C----------------CCEEEeCccHHHHHHHHHHHhcC
Q 027556 108 VLTEAGVRQAERCRKALRNI-Y----------------FDQCFSSPICRAKSTAEILWQGR 151 (222)
Q Consensus 108 pLT~~G~~Qa~~l~~~L~~~-~----------------~~~i~sSpl~Ra~qTA~~i~~~~ 151 (222)
.||..|+-||++||+.++.. . --.||+|+-.|.+-||+.+++.+
T Consensus 511 elT~agr~QAeeLGr~FR~~~~gg~g~gllrLhst~rhDlKIYaSdEgRVqmtAaaFAkgL 571 (1018)
T KOG1057|consen 511 ELTHAGRYQAEELGRQFRCDYPGGQGLGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGL 571 (1018)
T ss_pred EecchhHhhHHHHHHHHHhcCCCCCCcceeeehhhhhccceeEecCcchHHHHHHHHHHHH
Confidence 49999999999999999831 1 12699999999999999999875
No 42
>PF13422 DUF4110: Domain of unknown function (DUF4110)
Probab=41.52 E-value=49 Score=24.20 Aligned_cols=23 Identities=17% Similarity=0.471 Sum_probs=19.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhc
Q 027556 198 NGVYPVRNLWGTAREAWKEILLT 220 (222)
Q Consensus 198 p~gES~~~~~~Rv~~~l~~l~~~ 220 (222)
--|||+.+|+.|-...|..++-.
T Consensus 13 ~p~EsLr~Ff~RT~~~W~~~a~~ 35 (96)
T PF13422_consen 13 KPFESLRDFFARTSEYWQEWAIE 35 (96)
T ss_pred CCCCcHHHHHHHhHHHHHHHHHH
Confidence 35899999999999999887643
No 43
>KOG3672 consensus Histidine acid phosphatase [General function prediction only]
Probab=35.25 E-value=63 Score=29.83 Aligned_cols=41 Identities=22% Similarity=0.221 Sum_probs=33.2
Q ss_pred cCCHHHHHHHHHHHHHHhc------CC-------CC--EEEeCccHHHHHHHHHHH
Q 027556 108 VLTEAGVRQAERCRKALRN------IY-------FD--QCFSSPICRAKSTAEILW 148 (222)
Q Consensus 108 pLT~~G~~Qa~~l~~~L~~------~~-------~~--~i~sSpl~Ra~qTA~~i~ 148 (222)
.||.+|.-|-..+|+.++. .. .+ .|+|+-+.|+.|+|-.+.
T Consensus 168 ~LT~~G~~QhL~~G~~~r~~Y~k~~lk~~pN~~sv~~lyv~TT~y~RT~QSaLA~l 223 (487)
T KOG3672|consen 168 MLTAEGALQHLRLGKYFRHRYEKTKLKADPNQRSVADLYVVTTKYNRTVQSALAFL 223 (487)
T ss_pred ceeHHhHHHHHhhhHHHHHHHhhccccCCccccccceeEEEeccccHHHHHHHHHH
Confidence 3999999999999999872 11 22 499999999999998763
No 44
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=26.48 E-value=2.6e+02 Score=26.29 Aligned_cols=104 Identities=16% Similarity=0.079 Sum_probs=54.1
Q ss_pred HHHHHHHHhcCC----CC-EEEeCccHHHHHHHHHHHhcC----CCC--ccccccccccccCccCCCCHHHHHhhChhHH
Q 027556 117 AERCRKALRNIY----FD-QCFSSPICRAKSTAEILWQGR----DEP--LAFIDSLKEAHLFFLEGMKNVDARQKYPNEY 185 (222)
Q Consensus 117 a~~l~~~L~~~~----~~-~i~sSpl~Ra~qTA~~i~~~~----~~~--i~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~ 185 (222)
|.+|++.|.++- .+ ..|++.=.=|.|||--++.+. |.+ -.+..+-+-.+-..+-+++.-.....+...+
T Consensus 89 a~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~ 168 (449)
T COG0161 89 AIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFY 168 (449)
T ss_pred HHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhc
Confidence 555666665332 34 467888889999998776653 322 1133333333333333444333222221112
Q ss_pred hhh------hcCCCCCCCC-CCCCHHHHHHHHHHHHHHHHhcC
Q 027556 186 TTW------REDPANFNVN-GVYPVRNLWGTAREAWKEILLTP 221 (222)
Q Consensus 186 ~~~------~~~~~~~~~p-~gES~~~~~~Rv~~~l~~l~~~~ 221 (222)
... ...+..++.+ .+|+..++ .|...-|++++.++
T Consensus 169 ~~ll~~~~~~~~P~~y~~~~~~~~~~~~-~~~a~~le~~i~~~ 210 (449)
T COG0161 169 DPLLPEVLHLPAPYAYRRGFFGEGDEEF-AEAADELEALILEH 210 (449)
T ss_pred cccccCceecCCCcccccCCCCCChHHH-HHHHHHHHHHHHhc
Confidence 111 1122222222 37888888 88888888887653
No 45
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=24.50 E-value=1.7e+02 Score=17.74 Aligned_cols=47 Identities=9% Similarity=0.096 Sum_probs=31.4
Q ss_pred CccCCCCHHHHHhhChhHHhhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 027556 167 FFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEI 217 (222)
Q Consensus 167 G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~~~~~Rv~~~l~~l 217 (222)
|.-.+.+.++|++.|-.....|..|.. ++.+...+...++..+++.|
T Consensus 7 gl~~~~~~~~ik~~y~~l~~~~HPD~~----~~~~~~~~~~~~l~~Ay~~L 53 (55)
T cd06257 7 GVPPDASDEEIKKAYRKLALKYHPDKN----PDDPEAEEKFKEINEAYEVL 53 (55)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCcCCC----CCcHHHHHHHHHHHHHHHHh
Confidence 333567889999988877777765541 11155677777887777665
No 46
>KOG1382 consensus Multiple inositol polyphosphate phosphatase [General function prediction only]
Probab=23.96 E-value=1.2e+02 Score=28.46 Aligned_cols=44 Identities=16% Similarity=0.104 Sum_probs=35.4
Q ss_pred cCCHHHHHHHHHHHHHHhc-------CCCCEEEeCccHHHHHHHHHHHhcC
Q 027556 108 VLTEAGVRQAERCRKALRN-------IYFDQCFSSPICRAKSTAEILWQGR 151 (222)
Q Consensus 108 pLT~~G~~Qa~~l~~~L~~-------~~~~~i~sSpl~Ra~qTA~~i~~~~ 151 (222)
.|...|+..+.++++.+-. ...=.|+++-..||.+||+.++..+
T Consensus 132 ~l~~~g~~~a~R~~r~f~~~y~~~~n~~~y~i~tt~~~R~~dSA~~F~~GL 182 (467)
T KOG1382|consen 132 QLEDEGRMLAKRLARRFPALYYELENPTVYNINTTASQRVVDSAQAFAYGL 182 (467)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhhcCCceEEeeccchHHHHHHHHHHHhhh
Confidence 4788999999999887741 2233689999999999999998876
Done!