Your job contains 1 sequence.
>027557
MLFGIRDCPAVLSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAH
NDIKTLPAELAFNKKLQNLDLGKNLITRWSELKVLKSLVSLNNLNLQGNPVAEYDKLAKK
VKNLLPSLHIFNARPINRITKNEKDNIVDKVNDSSNNADDTIKVHMEKKRVGTRETNDKL
SNEEIQWSKSDSAAGKKLKKKSKQKEGELDAIDDAKNQSKWF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027557
(222 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2176397 - symbol:AT5G22320 species:3702 "Arabi... 374 1.7e-34 1
UNIPROTKB|H3BNZ6 - symbol:ISLR2 "Immunoglobulin superfami... 102 1.5e-05 1
TAIR|locus:2032040 - symbol:AT1G78230 species:3702 "Arabi... 123 1.8e-05 1
MGI|MGI:1924557 - symbol:Lrrc39 "leucine rich repeat cont... 116 5.3e-05 1
UNIPROTKB|H3BM69 - symbol:ISLR2 "Immunoglobulin superfami... 97 6.1e-05 1
MGI|MGI:2442313 - symbol:Lrrc1 "leucine rich repeat conta... 117 8.1e-05 1
ZFIN|ZDB-GENE-060503-289 - symbol:lrrc47 "leucine rich re... 117 9.2e-05 1
WB|WBGene00002632 - symbol:let-413 species:6239 "Caenorha... 116 0.00010 2
UNIPROTKB|O61967 - symbol:let-413 "Protein lap1" species:... 116 0.00010 2
ZFIN|ZDB-GENE-030616-572 - symbol:scrib "scribbled homolo... 122 0.00012 2
ZFIN|ZDB-GENE-050417-279 - symbol:lrrc39 "leucine rich re... 113 0.00013 1
ZFIN|ZDB-GENE-061103-349 - symbol:lrrc48 "leucine rich re... 114 0.00019 1
UNIPROTKB|Q9BTT6 - symbol:LRRC1 "Leucine-rich repeat-cont... 110 0.00022 2
MGI|MGI:1914394 - symbol:Lrrc40 "leucine rich repeat cont... 113 0.00032 1
DICTYBASE|DDB_G0278509 - symbol:DDB_G0278509 "MLK family ... 116 0.00032 1
FB|FBgn0034476 - symbol:Toll-7 "Toll-7" species:7227 "Dro... 116 0.00038 1
MGI|MGI:2145950 - symbol:Scrib "scribbled homolog (Drosop... 116 0.00043 1
RGD|1565055 - symbol:Scrib "scribbled planar cell polarit... 116 0.00043 1
UNIPROTKB|Q14160 - symbol:SCRIB "Protein scribble homolog... 116 0.00043 1
FB|FBgn0004364 - symbol:18w "18 wheeler" species:7227 "Dr... 114 0.00066 1
UNIPROTKB|A6QLV3 - symbol:SHOC2 "Leucine-rich repeat prot... 110 0.00072 1
UNIPROTKB|Q9UQ13 - symbol:SHOC2 "Leucine-rich repeat prot... 110 0.00072 1
UNIPROTKB|F2Z5G0 - symbol:SHOC2 "Uncharacterized protein"... 110 0.00072 1
UNIPROTKB|Q5RAV5 - symbol:SHOC2 "Leucine-rich repeat prot... 110 0.00072 1
GENEDB_PFALCIPARUM|PFI1470c - symbol:PFI1470c "leucine-ri... 110 0.00081 1
UNIPROTKB|C0H576 - symbol:PFI1470c "Putative uncharacteri... 110 0.00081 1
MGI|MGI:1913856 - symbol:Lrrc57 "leucine rich repeat cont... 104 0.00089 1
UNIPROTKB|Q8AVI4 - symbol:shoc2 "Leucine-rich repeat prot... 109 0.00096 1
MGI|MGI:1927197 - symbol:Shoc2 "soc-2 (suppressor of clea... 109 0.00097 1
RGD|1308146 - symbol:Shoc2 "soc-2 (suppressor of clear) h... 109 0.00097 1
>TAIR|locus:2176397 [details] [associations]
symbol:AT5G22320 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0009560 "embryo sac egg cell differentiation" evidence=RCA]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG4886 InterPro:IPR025875
Pfam:PF12799 HSSP:P25147 EMBL:AB007651 EMBL:AY056427 EMBL:AY090323
IPI:IPI00547435 RefSeq:NP_568416.1 UniGene:At.7358
ProteinModelPortal:Q9FMS0 SMR:Q9FMS0 STRING:Q9FMS0 PaxDb:Q9FMS0
PRIDE:Q9FMS0 EnsemblPlants:AT5G22320.1 GeneID:832292
KEGG:ath:AT5G22320 TAIR:At5g22320 HOGENOM:HOG000006314
InParanoid:Q9FMS0 OMA:NEISSIC PhylomeDB:Q9FMS0
ProtClustDB:CLSN2689839 Genevestigator:Q9FMS0 Uniprot:Q9FMS0
Length = 452
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 81/183 (44%), Positives = 125/183 (68%)
Query: 11 VLSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAEL 70
VLSRNPI EIGDSL +K ++K+SLS+C+++ IGSSLKSC++LKELRLA+N+IK LPAEL
Sbjct: 135 VLSRNPISEIGDSLSKLKNLSKISLSDCRIKAIGSSLKSCSDLKELRLANNEIKALPAEL 194
Query: 71 AFNKKLQNLDLGKNLITRWSEXXXXXXXXXXXXXXXQGNPVAEYDKLAKKVKNLL-PSLH 129
A NK+L NLD+G N+IT+ S +GNP+++ DK AKKV+ LL PS++
Sbjct: 195 AVNKRLLNLDVGNNVITQLSGLEVLGTLSCLRNLNIRGNPISDNDKSAKKVRTLLLPSVN 254
Query: 130 IFNARPINRITKNEKD---NIVDKVNDSSNNA---DDTIKVHMEKKRVGTRETNDK--LS 181
+FNA+P+ + ++N K + D+ D+ +N ++ K ++K+ R +++ ++
Sbjct: 255 VFNAQPLEKSSRNAKHIRLDTDDETFDAYHNKSAEEEQSKEDRKRKKSSKRNKSEEEEVN 314
Query: 182 NEE 184
NE+
Sbjct: 315 NED 317
>UNIPROTKB|H3BNZ6 [details] [associations]
symbol:ISLR2 "Immunoglobulin superfamily-containing
leucine-rich repeat protein 2" species:9606 "Homo sapiens"
[GO:0009986 "cell surface" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0009986 GO:GO:0045773 InterPro:IPR000372
SMART:SM00013 HGNC:HGNC:29286 EMBL:AC010931 Ensembl:ENST00000561740
Bgee:H3BNZ6 Uniprot:H3BNZ6
Length = 138
Score = 102 (41.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 27/79 (34%), Positives = 46/79 (58%)
Query: 17 IREIGDSLLNMKAITKLSLSNCQVQIIG-SSLKSCTELKELRLAHNDIKTL-PAELAFNK 74
+RE+ + L +T LSLS ++ ++ + T++ L LAHN+++T+ P LA
Sbjct: 42 LREVPEGL--PANVTTLSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAVLS 99
Query: 75 KLQNLDLGKNLITR--WSE 91
+L+NLDL N I+ WS+
Sbjct: 100 QLKNLDLSHNFISSFPWSD 118
>TAIR|locus:2032040 [details] [associations]
symbol:AT1G78230 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005773 "vacuole"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450 EMBL:CP002684
GO:GO:0005773 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 IPI:IPI00523634 RefSeq:NP_177947.3 UniGene:At.28560
ProteinModelPortal:F4IA60 SMR:F4IA60 PRIDE:F4IA60
EnsemblPlants:AT1G78230.1 GeneID:844159 KEGG:ath:AT1G78230
OMA:NCTLIKE Uniprot:F4IA60
Length = 681
Score = 123 (48.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 50/167 (29%), Positives = 75/167 (44%)
Query: 12 LSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAELA 71
LS+N I I + L ++ + L LS ++ IG L +CT +KEL LA N I + L
Sbjct: 480 LSKNKISVI-EGLRDLTRLRVLDLSYNRISRIGQGLSNCTLIKELYLAGNKISNVEG-LH 537
Query: 72 FNKKLQNLDLGKNLI-TRWSEXXXXXXXXXXXXXXXQGNPVAEY---DKLAKKVKNLLPS 127
KL LDL N I T + GNP+ D+L K V +LLP
Sbjct: 538 RLLKLIVLDLSFNKIATTKAIGQLVANYNSLVALNILGNPIQNNVGEDQLRKTVSSLLPK 597
Query: 128 LHIFNARPINRITKNEKDNIVDKVNDSSNNADDTIKVHMEKKRVGTR 174
L N + I + ++ + D V ++ D++ H +KR T+
Sbjct: 598 LVYHNKQLIK--PQRAREVLKDSVARAAFGGGDSL--HHRRKRTSTK 640
>MGI|MGI:1924557 [details] [associations]
symbol:Lrrc39 "leucine rich repeat containing 39"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1924557 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 EMBL:AK039277 EMBL:AK052159
EMBL:AK079125 IPI:IPI00221622 RefSeq:NP_780622.1 UniGene:Mm.216027
UniGene:Mm.259648 ProteinModelPortal:Q8BGI7 SMR:Q8BGI7
PhosphoSite:Q8BGI7 PRIDE:Q8BGI7 Ensembl:ENSMUST00000029573
GeneID:109245 KEGG:mmu:109245 CTD:127495
GeneTree:ENSGT00690000102098 HOGENOM:HOG000065739
HOVERGEN:HBG101376 InParanoid:Q8BGI7 OMA:HAYIQES OrthoDB:EOG47H5QR
NextBio:361821 Bgee:Q8BGI7 CleanEx:MM_LRRC39 Genevestigator:Q8BGI7
GermOnline:ENSMUSG00000027961 Uniprot:Q8BGI7
Length = 337
Score = 116 (45.9 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 12 LSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHN-DIKTLPAEL 70
LSRN I EI + + + +L LS +++ + L +CT L++L LA N DI LP EL
Sbjct: 113 LSRNTISEIPRGIGLLTRLQELILSYNKIKTVPKELSNCTSLEKLELAVNRDISDLPPEL 172
Query: 71 AFNKKLQNLDLGKNLIT 87
+ KL +LDL N T
Sbjct: 173 SKLLKLTHLDLSMNQFT 189
>UNIPROTKB|H3BM69 [details] [associations]
symbol:ISLR2 "Immunoglobulin superfamily-containing
leucine-rich repeat protein 2" species:9606 "Homo sapiens"
[GO:0009986 "cell surface" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0009986 GO:GO:0045773 InterPro:IPR000372
SMART:SM00013 HGNC:HGNC:29286 EMBL:AC010931 Ensembl:ENST00000565332
Bgee:H3BM69 Uniprot:H3BM69
Length = 114
Score = 97 (39.2 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 25/73 (34%), Positives = 43/73 (58%)
Query: 17 IREIGDSLLNMKAITKLSLSNCQVQIIG-SSLKSCTELKELRLAHNDIKTL-PAELAFNK 74
+RE+ + L +T LSLS ++ ++ + T++ L LAHN+++T+ P LA
Sbjct: 42 LREVPEGL--PANVTTLSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAVLS 99
Query: 75 KLQNLDLGKNLIT 87
+L+NLDL N I+
Sbjct: 100 QLKNLDLSHNFIS 112
>MGI|MGI:2442313 [details] [associations]
symbol:Lrrc1 "leucine rich repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2442313 GO:GO:0005737 GO:GO:0016020 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000116557 CTD:55227 HOVERGEN:HBG052357 OrthoDB:EOG498V0J
EMBL:AK051043 EMBL:AK082721 EMBL:AK147075 EMBL:BC046591
EMBL:BC087542 IPI:IPI00267845 IPI:IPI00453515 IPI:IPI00469577
RefSeq:NP_001139520.1 RefSeq:NP_766116.3 UniGene:Mm.28534
UniGene:Mm.482664 ProteinModelPortal:Q80VQ1 SMR:Q80VQ1
STRING:Q80VQ1 PhosphoSite:Q80VQ1 PaxDb:Q80VQ1 PRIDE:Q80VQ1
GeneID:214345 KEGG:mmu:214345 InParanoid:Q80VQ1 NextBio:374274
CleanEx:MM_LRRC1 Genevestigator:Q80VQ1
GermOnline:ENSMUSG00000032352 Uniprot:Q80VQ1
Length = 524
Score = 117 (46.2 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 26/81 (32%), Positives = 44/81 (54%)
Query: 11 VLSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAEL 70
+L N +RE+ + + + KL LS+ ++Q + + + +L EL ++ NDI +P +
Sbjct: 42 LLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESI 101
Query: 71 AFNKKLQNLDLGKNLITRWSE 91
AF K LQ D N +TR E
Sbjct: 102 AFCKALQVADFSGNPLTRLPE 122
>ZFIN|ZDB-GENE-060503-289 [details] [associations]
symbol:lrrc47 "leucine rich repeat containing 47"
species:7955 "Danio rerio" [GO:0004826 "phenylalanine-tRNA ligase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR005146 Pfam:PF03483
PROSITE:PS51450 SMART:SM00873 ZFIN:ZDB-GENE-060503-289
InterPro:IPR003591 SMART:SM00369 GO:GO:0003723 GO:GO:0004826
GeneTree:ENSGT00530000063489 EMBL:CT737125 EMBL:CR352301
IPI:IPI00890622 ProteinModelPortal:F1QAF8
Ensembl:ENSDART00000075129 ArrayExpress:F1QAF8 Uniprot:F1QAF8
Length = 575
Score = 117 (46.2 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 33/122 (27%), Positives = 61/122 (50%)
Query: 11 VLSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAEL 70
+L RN + + S+ ++KA+ L LS Q+Q + + + TEL L ++ N + LP L
Sbjct: 90 ILCRNKLTSVPKSIGHLKAVKVLDLSVNQLQALPEEICALTELNTLNVSCNSLTALPDGL 149
Query: 71 AFNKKLQNLDLGKNLITRWSEXXXXXXXXXXXXXXXQGNPVAEYDKLAKKVKNLLPSLHI 130
+ KL ++++ KN ++R E N + E L+ +++NL PSL +
Sbjct: 150 SKCVKLASINVSKNELSRLPEDLWCSGLELLSSIIASENAIEE---LSSEIQNL-PSLKV 205
Query: 131 FN 132
+
Sbjct: 206 LD 207
>WB|WBGene00002632 [details] [associations]
symbol:let-413 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0040015 "negative regulation of multicellular
organism growth" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0060465
"pharynx development" evidence=IMP] [GO:0007155 "cell adhesion"
evidence=IMP] [GO:0030728 "ovulation" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0007043 "cell-cell junction
assembly" evidence=IMP] [GO:0030029 "actin filament-based process"
evidence=IMP] [GO:0016323 "basolateral plasma membrane"
evidence=IDA] Pfam:PF00595 InterPro:IPR001611 InterPro:IPR001478
PROSITE:PS50106 PROSITE:PS51450 SMART:SM00228 GO:GO:0009792
GO:GO:0030728 GO:GO:0007163 GO:GO:0015031 eggNOG:COG4886
GO:GO:0040011 GO:GO:0007155 GO:GO:0016323 GO:GO:0005912
GO:GO:0040035 GO:GO:0040015 SUPFAM:SSF50156 GO:GO:0007043
GO:GO:0060465 GO:GO:0030029 EMBL:AJ276590 EMBL:FO081227 PIR:T33295
RefSeq:NP_001023850.1 RefSeq:NP_001023851.1 UniGene:Cel.6189
ProteinModelPortal:O61967 SMR:O61967 DIP:DIP-25349N IntAct:O61967
MINT:MINT-1058604 STRING:O61967 PaxDb:O61967 PRIDE:O61967
EnsemblMetazoa:F26D11.11b GeneID:179171 KEGG:cel:CELE_F26D11.11
UCSC:F26D11.11a CTD:179171 WormBase:F26D11.11a WormBase:F26D11.11b
GeneTree:ENSGT00650000093182 HOGENOM:HOG000116557 InParanoid:O61967
OMA:FERHNTP NextBio:904226 GO:GO:0045108 Uniprot:O61967
Length = 699
Score = 116 (45.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 12 LSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAELA 71
LS NP + +++ +IT LSL+ + ++ S++ S T L+ L N ++T+P +
Sbjct: 112 LSSNPFTRLPETICECSSITILSLNETSLTLLPSNIGSLTNLRVLEARDNLLRTIPLSIV 171
Query: 72 FNKKLQNLDLGKN 84
+KL+ LDLG+N
Sbjct: 172 ELRKLEELDLGQN 184
Score = 37 (18.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 146 NIVDKVNDSSNNADDTIK 163
N V+ +N S +NA + IK
Sbjct: 627 NDVNMINASQDNAMEAIK 644
>UNIPROTKB|O61967 [details] [associations]
symbol:let-413 "Protein lap1" species:6239 "Caenorhabditis
elegans" [GO:0045108 "regulation of intermediate filament
polymerization or depolymerization" evidence=IMP] [GO:0007163
"establishment or maintenance of cell polarity" evidence=IEP]
[GO:0015031 "protein transport" evidence=IEP] [GO:0005912 "adherens
junction" evidence=IDA] Pfam:PF00595 InterPro:IPR001611
InterPro:IPR001478 PROSITE:PS50106 PROSITE:PS51450 SMART:SM00228
GO:GO:0009792 GO:GO:0030728 GO:GO:0007163 GO:GO:0015031
eggNOG:COG4886 GO:GO:0040011 GO:GO:0007155 GO:GO:0016323
GO:GO:0005912 GO:GO:0040035 GO:GO:0040015 SUPFAM:SSF50156
GO:GO:0007043 GO:GO:0060465 GO:GO:0030029 EMBL:AJ276590
EMBL:FO081227 PIR:T33295 RefSeq:NP_001023850.1
RefSeq:NP_001023851.1 UniGene:Cel.6189 ProteinModelPortal:O61967
SMR:O61967 DIP:DIP-25349N IntAct:O61967 MINT:MINT-1058604
STRING:O61967 PaxDb:O61967 PRIDE:O61967 EnsemblMetazoa:F26D11.11b
GeneID:179171 KEGG:cel:CELE_F26D11.11 UCSC:F26D11.11a CTD:179171
WormBase:F26D11.11a WormBase:F26D11.11b
GeneTree:ENSGT00650000093182 HOGENOM:HOG000116557 InParanoid:O61967
OMA:FERHNTP NextBio:904226 GO:GO:0045108 Uniprot:O61967
Length = 699
Score = 116 (45.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 12 LSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAELA 71
LS NP + +++ +IT LSL+ + ++ S++ S T L+ L N ++T+P +
Sbjct: 112 LSSNPFTRLPETICECSSITILSLNETSLTLLPSNIGSLTNLRVLEARDNLLRTIPLSIV 171
Query: 72 FNKKLQNLDLGKN 84
+KL+ LDLG+N
Sbjct: 172 ELRKLEELDLGQN 184
Score = 37 (18.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 146 NIVDKVNDSSNNADDTIK 163
N V+ +N S +NA + IK
Sbjct: 627 NDVNMINASQDNAMEAIK 644
>ZFIN|ZDB-GENE-030616-572 [details] [associations]
symbol:scrib "scribbled homolog (Drosophila)"
species:7955 "Danio rerio" [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IMP] [GO:0014021 "secondary neural
tube formation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA;IDA] [GO:0060027
"convergent extension involved in gastrulation" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IEA;ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0045211 "postsynaptic membrane" evidence=ISS] [GO:0045930
"negative regulation of mitotic cell cycle" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0050918 "positive chemotaxis" evidence=ISS]
[GO:0005913 "cell-cell adherens junction" evidence=ISS] [GO:0016337
"cell-cell adhesion" evidence=ISS] [GO:0042734 "presynaptic
membrane" evidence=ISS] [GO:0032863 "activation of Rac GTPase
activity" evidence=ISS] [GO:0031252 "cell leading edge"
evidence=ISS] [GO:0035089 "establishment of apical/basal cell
polarity" evidence=ISS] [GO:0060561 "apoptotic process involved in
morphogenesis" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] Pfam:PF00595
InterPro:IPR001611 InterPro:IPR001478 PROSITE:PS50106
PROSITE:PS51450 SMART:SM00228 ZFIN:ZDB-GENE-030616-572
GO:GO:0005886 GO:GO:0000132 GO:GO:0005737 GO:GO:0001764
GO:GO:0008283 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0005913 GO:GO:0043065 GO:GO:0016337 SUPFAM:SSF50156
InterPro:IPR025875 Pfam:PF12799 GO:GO:0050918 GO:GO:0032863
GO:GO:0060027 GO:GO:0045930 GO:GO:0060561 GO:GO:0035089
GeneTree:ENSGT00650000093182 CTD:23513 KO:K16175 EMBL:AB188388
IPI:IPI00650410 RefSeq:NP_001007176.1 UniGene:Dr.41478 HSSP:Q14160
ProteinModelPortal:Q4H4B6 SMR:Q4H4B6 STRING:Q4H4B6 PRIDE:Q4H4B6
Ensembl:ENSDART00000074212 GeneID:368473 KEGG:dre:368473
HOGENOM:HOG000113281 InParanoid:Q4H4B6 OMA:GHRNSLE
OrthoDB:EOG44BB1C NextBio:20812953 ArrayExpress:Q4H4B6 Bgee:Q4H4B6
GO:GO:0014021 Uniprot:Q4H4B6
Length = 1724
Score = 122 (48.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 10 AVLSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAE 69
A S NP+ + D ++ + LSL++ +Q + + + + + L L L N +K+LP+
Sbjct: 110 ADFSGNPLTRLPDGFTQLRGLAHLSLNDVSLQSLPNDIGNLSNLVTLELRENLLKSLPSS 169
Query: 70 LAFNKKLQNLDLGKNLI 86
L+F KL+ LDLG N++
Sbjct: 170 LSFLVKLEQLDLGSNVL 186
Score = 36 (17.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/55 (21%), Positives = 24/55 (43%)
Query: 135 PINRITKNEKDNIVDKVNDSSNNADDTIKVHMEKKRVGTRETND-KLS--NEEIQ 186
P +NE+D D+ + + +D + + R+ E D ++S N +Q
Sbjct: 652 PTAHTPENERDGEDDEEEEEDEDEEDDLHTPFQH-RLDAAELEDIRMSQMNSSLQ 705
>ZFIN|ZDB-GENE-050417-279 [details] [associations]
symbol:lrrc39 "leucine rich repeat containing 39"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0045214 "sarcomere organization" evidence=IMP]
[GO:0060047 "heart contraction" evidence=IMP] [GO:0055008 "cardiac
muscle tissue morphogenesis" evidence=IMP] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-050417-279 InterPro:IPR003591
SMART:SM00369 GO:GO:0060047 GO:GO:0055008 GO:GO:0045214
InterPro:IPR025875 Pfam:PF12799 CTD:127495 HOVERGEN:HBG101376
EMBL:BC093194 IPI:IPI00774171 RefSeq:NP_001017760.1
UniGene:Dr.91423 ProteinModelPortal:Q567F2 GeneID:550456
KEGG:dre:550456 InParanoid:Q567F2 NextBio:20879701 Uniprot:Q567F2
Length = 343
Score = 113 (44.8 bits), Expect = 0.00013, P = 0.00013
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 12 LSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHN-DIKTLPAEL 70
LSRN + EI + + + +L LS +V + L C L++L LA N D+ LP +L
Sbjct: 118 LSRNSVTEIPKEIGKLTRLRELLLSYNRVSYVPEELGCCENLEKLELAMNQDLDELPTQL 177
Query: 71 AFNKKLQNLDLGKNLIT 87
+ KKL +LDL N T
Sbjct: 178 SNLKKLSHLDLSMNQFT 194
>ZFIN|ZDB-GENE-061103-349 [details] [associations]
symbol:lrrc48 "leucine rich repeat containing 48"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-061103-349 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00670000097777 EMBL:CABZ01079582 IPI:IPI00771868
Ensembl:ENSDART00000060527 OMA:RDLENIH ArrayExpress:F1R517
Bgee:F1R517 Uniprot:F1R517
Length = 513
Score = 114 (45.2 bits), Expect = 0.00019, P = 0.00019
Identities = 46/175 (26%), Positives = 77/175 (44%)
Query: 12 LSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAELA 71
L N I I + L N+ +T L LS ++++I L++ +L++L L +N I + L
Sbjct: 63 LDNNAIERI-EGLENLTNLTWLDLSFNKIEVI-EGLQTLVKLQDLSLFNNRISVIE-NLD 119
Query: 72 FNKKLQNLDLGKNLITRWSEXXXXXXXXXXXXXXXQGNPVAEYDKLAKKVKNLLPSLHIF 131
++LQ L LG N I + GNP+ E D+ V LP L
Sbjct: 120 TLQRLQVLSLGNNSIAQLENVIYLRRFQSLRTLNLAGNPICEEDRYKTFVSAYLPELVYL 179
Query: 132 NARPINRITKNEKDNIVDKVNDSSNNADDTIKVHMEKKRVGTRETNDKLSNEEIQ 186
+ R ++ T+ + N A + ++ + E + E K+SNEE+Q
Sbjct: 180 DYRLLDEQTR-------ETANAKYQYAIEEMRQN-EMQEQQAMEAQ-KISNEELQ 225
>UNIPROTKB|Q9BTT6 [details] [associations]
symbol:LRRC1 "Leucine-rich repeat-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005737 EMBL:CH471081
GO:GO:0016020 eggNOG:COG4886 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000116557 EMBL:AF359380 EMBL:AF332199 EMBL:AK021896
EMBL:AK001637 EMBL:AL513211 EMBL:AL033384 EMBL:BC003193
IPI:IPI00427739 IPI:IPI00427741 RefSeq:NP_060684.4
UniGene:Hs.646997 UniGene:Hs.732252 ProteinModelPortal:Q9BTT6
SMR:Q9BTT6 IntAct:Q9BTT6 MINT:MINT-1423850 STRING:Q9BTT6
PhosphoSite:Q9BTT6 DMDM:50401149 PaxDb:Q9BTT6 PeptideAtlas:Q9BTT6
PRIDE:Q9BTT6 DNASU:55227 Ensembl:ENST00000370888
Ensembl:ENST00000487251 GeneID:55227 KEGG:hsa:55227 UCSC:uc003pcd.1
CTD:55227 GeneCards:GC06P053706 HGNC:HGNC:14307 HPA:HPA031602
HPA:HPA031603 HPA:HPA031604 MIM:608195 neXtProt:NX_Q9BTT6
PharmGKB:PA30460 HOVERGEN:HBG052357 InParanoid:Q9BTT6 OMA:FQTDTDH
OrthoDB:EOG498V0J PhylomeDB:Q9BTT6 GenomeRNAi:55227 NextBio:59224
ArrayExpress:Q9BTT6 Bgee:Q9BTT6 CleanEx:HS_LRRC1
Genevestigator:Q9BTT6 GermOnline:ENSG00000137269 Uniprot:Q9BTT6
Length = 524
Score = 110 (43.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 11 VLSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAEL 70
+L N +RE+ + + + KL LS+ ++Q + + + +L EL ++ N+I +P +
Sbjct: 42 LLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESI 101
Query: 71 AFNKKLQNLDLGKNLITRWSE 91
+F K LQ D N +TR E
Sbjct: 102 SFCKALQVADFSGNPLTRLPE 122
Score = 39 (18.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 113 EYDKLAKKVKNLLPSLHIFNARPINRITKNEKDNIVDKVNDS 154
E + K V+NL ++ N KNE ++ +D+V S
Sbjct: 485 ELKHMKKTVENLRNDMNAAKGLDSN---KNEVNHAIDRVTTS 523
>MGI|MGI:1914394 [details] [associations]
symbol:Lrrc40 "leucine rich repeat containing 40"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1914394 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104287 CTD:55631 HOGENOM:HOG000005761
HOVERGEN:HBG081930 OrthoDB:EOG4M65HK InterPro:IPR015766
PANTHER:PTHR23155:SF28 EMBL:AK011726 EMBL:AK017814 EMBL:AK034978
EMBL:AK163288 IPI:IPI00470138 RefSeq:NP_077156.2 UniGene:Mm.358704
ProteinModelPortal:Q9CRC8 SMR:Q9CRC8 STRING:Q9CRC8
PhosphoSite:Q9CRC8 PaxDb:Q9CRC8 PRIDE:Q9CRC8
Ensembl:ENSMUST00000072080 GeneID:67144 KEGG:mmu:67144
UCSC:uc008rvu.1 InParanoid:Q9CRC8 NextBio:323714 Bgee:Q9CRC8
CleanEx:MM_LRRC40 Genevestigator:Q9CRC8
GermOnline:ENSMUSG00000063052 Uniprot:Q9CRC8
Length = 602
Score = 113 (44.8 bits), Expect = 0.00032, P = 0.00032
Identities = 23/77 (29%), Positives = 45/77 (58%)
Query: 11 VLSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAEL 70
++S N ++ + D L + A+T L + + Q+ + S+++ L++L ++HN +K LP E+
Sbjct: 88 IISSNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKILPEEI 147
Query: 71 AFNKKLQNLDLGKNLIT 87
K L+ L L N +T
Sbjct: 148 TSLKNLRTLHLQHNELT 164
>DICTYBASE|DDB_G0278509 [details] [associations]
symbol:DDB_G0278509 "MLK family protein kinase
DDB_G0278509" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS51450 dictyBase:DDB_G0278509
GO:GO:0005524 EMBL:AAFI02000023 SUPFAM:SSF56112 GO:GO:0004674
eggNOG:COG4886 InterPro:IPR025875 Pfam:PF12799 HSSP:P25147
ProtClustDB:CLSZ2846780 RefSeq:XP_642407.1
ProteinModelPortal:Q54XZ5 EnsemblProtists:DDB0220138 GeneID:8621612
KEGG:ddi:DDB_G0278509 OMA:LEIPENC Uniprot:Q54XZ5
Length = 1248
Score = 116 (45.9 bits), Expect = 0.00032, P = 0.00032
Identities = 30/109 (27%), Positives = 56/109 (51%)
Query: 12 LSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAELA 71
+S N I+++ ++ N+ ++ +L+ SN ++++ S+ + LK+L L +N++K LP+ +
Sbjct: 625 ISNNKIKQLPFAINNLSSLIELNASNNVIELLPDSICYLSNLKKLNLNNNNLKELPSNIG 684
Query: 72 FNKKLQNLDLGKNLITRWSEXXXXXXXXXXXXXXXQGNPVAEYDKLAKK 120
F KL +L L N I+ S GNP+ Y L K
Sbjct: 685 FLTKLVDLQLYNNQIS--SLPISFLKCRSIREIGTDGNPLPSYYHLGIK 731
>FB|FBgn0034476 [details] [associations]
symbol:Toll-7 "Toll-7" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0004888
"transmembrane signaling receptor activity" evidence=ISS;NAS]
[GO:0006952 "defense response" evidence=NAS] [GO:0016021 "integral
to membrane" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IEA;ISS] [GO:0002752 "cell surface pattern recognition
receptor signaling pathway" evidence=IC] [GO:0008329 "pattern
recognition receptor activity" evidence=IC] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0046790 "virion binding"
evidence=IDA] [GO:0009897 "external side of plasma membrane"
evidence=IDA] [GO:0010508 "positive regulation of autophagy"
evidence=IMP] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 EMBL:AE013599
GO:GO:0016021 GO:GO:0009897 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0010508 GO:GO:0051607
GO:GO:0005622 InterPro:IPR000372 SMART:SM00013 GO:GO:0008329
GO:GO:0046790 GO:GO:0002752 GeneTree:ENSGT00700000104442
SUPFAM:SSF52200 FlyBase:FBgn0034476 EMBL:AF247765
RefSeq:NP_523797.1 UniGene:Dm.2660 SMR:Q7KIN0
EnsemblMetazoa:FBtr0086336 GeneID:37272 KEGG:dme:Dmel_CG8595
UCSC:CG8595-RA CTD:37272 InParanoid:Q7KIN0 OMA:NHAFIGR
GenomeRNAi:37272 NextBio:802851 Uniprot:Q7KIN0
Length = 1446
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 12 LSRNPIREIGDSLLN-MKAITKLSLSNCQVQIIGSSL-KSCTELKELRLAHNDIKTLPAE 69
L+ N + + D L N + ++KL+L+N + ++ ++ K+C++LKEL L+ N + +P
Sbjct: 425 LAENRLHTLDDKLFNGLYVLSKLTLNNNLISVVEPAVFKNCSDLKELDLSSNQLNEVPRA 484
Query: 70 LAFNKKLQNLDLGKNLI 86
L L+ LDLG+N I
Sbjct: 485 LQDLAMLRTLDLGENQI 501
>MGI|MGI:2145950 [details] [associations]
symbol:Scrib "scribbled homolog (Drosophila)" species:10090
"Mus musculus" [GO:0001843 "neural tube closure" evidence=ISO;IMP]
[GO:0001921 "positive regulation of receptor recycling"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0005911 "cell-cell junction" evidence=ISO]
[GO:0005913 "cell-cell adherens junction" evidence=ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008105
"asymmetric protein localization" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016080 "synaptic vesicle targeting" evidence=IMP] [GO:0016323
"basolateral plasma membrane" evidence=IDA] [GO:0016331
"morphogenesis of embryonic epithelium" evidence=IMP] [GO:0016337
"cell-cell adhesion" evidence=ISO] [GO:0016477 "cell migration"
evidence=ISO;IMP] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0032863
"activation of Rac GTPase activity" evidence=ISO] [GO:0034750
"Scrib-APC-beta-catenin complex" evidence=ISO] [GO:0035089
"establishment of apical/basal cell polarity" evidence=ISO]
[GO:0035748 "myelin sheath abaxonal region" evidence=IDA]
[GO:0042060 "wound healing" evidence=IGI] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043615
"astrocyte cell migration" evidence=ISO] [GO:0045930 "negative
regulation of mitotic cell cycle" evidence=ISO] [GO:0048488
"synaptic vesicle endocytosis" evidence=IMP] [GO:0050918 "positive
chemotaxis" evidence=ISO;IMP] [GO:0060561 "apoptotic process
involved in morphogenesis" evidence=ISO] [GO:0060603 "mammary gland
duct morphogenesis" evidence=IMP] [GO:0071896 "protein localization
to adherens junction" evidence=ISO] Pfam:PF00595 InterPro:IPR001611
InterPro:IPR001478 PROSITE:PS50106 PROSITE:PS51450 SMART:SM00228
MGI:MGI:2145950 GO:GO:0031252 GO:GO:0016477 GO:GO:0008283
GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0016323 GO:GO:0042734 GO:GO:0005913 GO:GO:0043065
GO:GO:0016337 GO:GO:0001843 GO:GO:0042060 SUPFAM:SSF50156
GO:GO:0008105 GO:GO:0001921 GO:GO:0048488 InterPro:IPR025875
Pfam:PF12799 GO:GO:0050918 GO:GO:0034750 GO:GO:0032863
GO:GO:0045930 GO:GO:0035748 GO:GO:0060561 GO:GO:0060603
GO:GO:0016080 GO:GO:0071896 GO:GO:0035089 ChiTaRS:scrib
GeneTree:ENSGT00650000093182 CTD:23513 KO:K16175 OMA:GHRNSLE
OrthoDB:EOG44BB1C EMBL:AF441233 EMBL:AK122211 EMBL:BC006859
EMBL:BC037480 EMBL:BC049942 EMBL:BC062888 EMBL:AF271735
IPI:IPI00129388 IPI:IPI00454104 IPI:IPI00454106 IPI:IPI00474285
RefSeq:NP_598850.1 UniGene:Mm.25568 ProteinModelPortal:Q80U72
SMR:Q80U72 IntAct:Q80U72 STRING:Q80U72 PhosphoSite:Q80U72
PaxDb:Q80U72 PRIDE:Q80U72 Ensembl:ENSMUST00000002603
Ensembl:ENSMUST00000063747 Ensembl:ENSMUST00000109946 GeneID:105782
KEGG:mmu:105782 UCSC:uc007wif.1 UCSC:uc007wig.1 UCSC:uc007wih.1
UCSC:uc007wii.1 NextBio:357886 Bgee:Q80U72 CleanEx:MM_SCRIB
Genevestigator:Q80U72 GermOnline:ENSMUSG00000022568 Uniprot:Q80U72
Length = 1612
Score = 116 (45.9 bits), Expect = 0.00043, P = 0.00043
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 10 AVLSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAE 69
A S NP+ + D ++++ L+L++ +Q + + + L L L N +K+LPA
Sbjct: 110 ADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPAS 169
Query: 70 LAFNKKLQNLDLGKN 84
L+F KL+ LDLG N
Sbjct: 170 LSFLVKLEQLDLGGN 184
>RGD|1565055 [details] [associations]
symbol:Scrib "scribbled planar cell polarity protein"
species:10116 "Rattus norvegicus" [GO:0001843 "neural tube closure"
evidence=ISO] [GO:0001921 "positive regulation of receptor
recycling" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0005911 "cell-cell junction"
evidence=ISO;IDA] [GO:0005913 "cell-cell adherens junction"
evidence=ISO] [GO:0008105 "asymmetric protein localization"
evidence=ISO] [GO:0008283 "cell proliferation" evidence=ISO]
[GO:0016080 "synaptic vesicle targeting" evidence=ISO] [GO:0016323
"basolateral plasma membrane" evidence=ISO] [GO:0016331
"morphogenesis of embryonic epithelium" evidence=ISO] [GO:0016337
"cell-cell adhesion" evidence=ISO] [GO:0016477 "cell migration"
evidence=ISO] [GO:0032863 "activation of Rac GTPase activity"
evidence=ISO] [GO:0034750 "Scrib-APC-beta-catenin complex"
evidence=ISO] [GO:0035089 "establishment of apical/basal cell
polarity" evidence=ISO] [GO:0035748 "myelin sheath abaxonal region"
evidence=ISO] [GO:0042060 "wound healing" evidence=ISO] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043615 "astrocyte cell migration" evidence=IMP] [GO:0045930
"negative regulation of mitotic cell cycle" evidence=ISO]
[GO:0048488 "synaptic vesicle endocytosis" evidence=ISO]
[GO:0050918 "positive chemotaxis" evidence=ISO] [GO:0060561
"apoptotic process involved in morphogenesis" evidence=ISO]
[GO:0060603 "mammary gland duct morphogenesis" evidence=ISO]
[GO:0071896 "protein localization to adherens junction"
evidence=ISO] [GO:0031252 "cell leading edge" evidence=ISO]
[GO:0042734 "presynaptic membrane" evidence=ISO] [GO:0045211
"postsynaptic membrane" evidence=ISO] Pfam:PF00595
InterPro:IPR001611 InterPro:IPR001478 PROSITE:PS50106
PROSITE:PS51450 SMART:SM00228 RGD:1565055 GO:GO:0005737
InterPro:IPR003591 SMART:SM00369 GO:GO:0005911 SUPFAM:SSF50156
InterPro:IPR025875 Pfam:PF12799 GO:GO:0043615 IPI:IPI00564915
ProteinModelPortal:D3ZYD0 PRIDE:D3ZYD0 Ensembl:ENSRNOT00000047338
UCSC:RGD:1565055 ArrayExpress:D3ZYD0 Uniprot:D3ZYD0
Length = 1617
Score = 116 (45.9 bits), Expect = 0.00043, P = 0.00043
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 10 AVLSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAE 69
A S NP+ + D ++++ L+L++ +Q + + + L L L N +K+LPA
Sbjct: 110 ADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPAS 169
Query: 70 LAFNKKLQNLDLGKN 84
L+F KL+ LDLG N
Sbjct: 170 LSFLVKLEQLDLGGN 184
>UNIPROTKB|Q14160 [details] [associations]
symbol:SCRIB "Protein scribble homolog" species:9606 "Homo
sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0008105 "asymmetric protein localization" evidence=IEA]
[GO:0016080 "synaptic vesicle targeting" evidence=IEA] [GO:0016323
"basolateral plasma membrane" evidence=IEA] [GO:0035748 "myelin
sheath abaxonal region" evidence=IEA] [GO:0042060 "wound healing"
evidence=IEA] [GO:0048488 "synaptic vesicle endocytosis"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043065 "positive
regulation of apoptotic process" evidence=IMP] [GO:0060561
"apoptotic process involved in morphogenesis" evidence=IMP]
[GO:0035089 "establishment of apical/basal cell polarity"
evidence=IMP] [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0045930 "negative regulation of mitotic cell cycle"
evidence=IDA] [GO:0008283 "cell proliferation" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IDA] [GO:0005913 "cell-cell
adherens junction" evidence=IDA] [GO:0050918 "positive chemotaxis"
evidence=IMP] [GO:0031252 "cell leading edge" evidence=IDA]
[GO:0001921 "positive regulation of receptor recycling"
evidence=IMP] [GO:0060603 "mammary gland duct morphogenesis"
evidence=ISS] [GO:0042734 "presynaptic membrane" evidence=IDA]
[GO:0016477 "cell migration" evidence=IMP] [GO:0032863 "activation
of Rac GTPase activity" evidence=IMP] [GO:0001843 "neural tube
closure" evidence=IMP] [GO:0034750 "Scrib-APC-beta-catenin complex"
evidence=IDA] [GO:0071896 "protein localization to adherens
junction" evidence=IMP] Pfam:PF00595 InterPro:IPR001611
InterPro:IPR001478 PROSITE:PS50106 PROSITE:PS51450 SMART:SM00228
GO:GO:0005886 GO:GO:0019048 GO:GO:0016477 GO:GO:0008283
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0016323
GO:GO:0005913 GO:GO:0043065 GO:GO:0016337 GO:GO:0001843
GO:GO:0042060 SUPFAM:SSF50156 GO:GO:0008105 GO:GO:0001921
GO:GO:0048488 InterPro:IPR025875 Pfam:PF12799 GO:GO:0050918
GO:GO:0034750 GO:GO:0032863 GO:GO:0045930 MIM:182940 GO:GO:0035748
GO:GO:0060561 GO:GO:0060603 GO:GO:0016080 GO:GO:0071896
EMBL:AC105219 GO:GO:0035089 CTD:23513 KO:K16175
HOGENOM:HOG000113281 OMA:GHRNSLE EMBL:AF240677 EMBL:AY062238
EMBL:AF271734 EMBL:D63481 EMBL:BC009490 EMBL:BC014632
IPI:IPI00410666 IPI:IPI00425560 IPI:IPI00425562 RefSeq:NP_056171.3
RefSeq:NP_874365.3 UniGene:Hs.436329 PDB:1UJU PDB:1WHA PDB:1X5Q
PDB:2W4F PDBsum:1UJU PDBsum:1WHA PDBsum:1X5Q PDBsum:2W4F
ProteinModelPortal:Q14160 SMR:Q14160 DIP:DIP-31259N IntAct:Q14160
MINT:MINT-147371 STRING:Q14160 PhosphoSite:Q14160 DMDM:261260101
PaxDb:Q14160 PRIDE:Q14160 DNASU:23513 Ensembl:ENST00000320476
Ensembl:ENST00000356994 Ensembl:ENST00000377533
Ensembl:ENST00000564122 Ensembl:ENST00000567584
Ensembl:ENST00000569114 GeneID:23513 KEGG:hsa:23513 UCSC:uc003yzo.1
UCSC:uc003yzp.1 GeneCards:GC08M144874 HGNC:HGNC:30377 MIM:607733
neXtProt:NX_Q14160 PharmGKB:PA134936275 EvolutionaryTrace:Q14160
GenomeRNAi:23513 NextBio:45935 ArrayExpress:Q14160 Bgee:Q14160
CleanEx:HS_SCRIB Genevestigator:Q14160 GermOnline:ENSG00000180900
Uniprot:Q14160
Length = 1630
Score = 116 (45.9 bits), Expect = 0.00043, P = 0.00043
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 10 AVLSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAE 69
A S NP+ + D ++++ L+L++ +Q + + + L L L N +K+LPA
Sbjct: 110 ADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPAS 169
Query: 70 LAFNKKLQNLDLGKN 84
L+F KL+ LDLG N
Sbjct: 170 LSFLVKLEQLDLGGN 184
>FB|FBgn0004364 [details] [associations]
symbol:18w "18 wheeler" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS;IDA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=IDA] [GO:0009653
"anatomical structure morphogenesis" evidence=IMP] [GO:0006955
"immune response" evidence=IEP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0019731 "antibacterial humoral response"
evidence=NAS;IMP;TAS] [GO:0048598 "embryonic morphogenesis"
evidence=TAS] [GO:0006952 "defense response" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA;ISS] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0019730 "antimicrobial
humoral response" evidence=IMP] InterPro:IPR000157
InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
GO:GO:0048598 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007155 GO:GO:0019731 InterPro:IPR000372
SMART:SM00013 GO:GO:0004888 InterPro:IPR026906 Pfam:PF13306
SUPFAM:SSF52200 FlyBase:FBgn0004364 EMBL:L23171 PIR:T13852
PIR:T13887 HSSP:O60603 ProteinModelPortal:Q24591 STRING:Q24591
PRIDE:Q24591 InParanoid:Q24591 ArrayExpress:Q24591 Bgee:Q24591
Uniprot:Q24591
Length = 1389
Score = 114 (45.2 bits), Expect = 0.00066, P = 0.00066
Identities = 26/80 (32%), Positives = 49/80 (61%)
Query: 12 LSRNPIREIGDSLLN-MKAITKLSLSNCQVQIIGS-SLKSCTELKELRLAHNDIKTLPAE 69
L+ N + + + + N + +TKL+L+N V I+ S + ++C++LKEL L+ N + +P
Sbjct: 388 LAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRNCSDLKELDLSSNQLTEVPEA 447
Query: 70 LAFNKKLQNLDLGKNLITRW 89
+ L+ LDLG+N I+ +
Sbjct: 448 VQDLSMLKTLDLGENQISEF 467
>UNIPROTKB|A6QLV3 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9913 "Bos taurus" [GO:0019903 "protein phosphatase binding"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0000164 "protein phosphatase type 1
complex" evidence=ISS] [GO:0046579 "positive regulation of Ras
protein signal transduction" evidence=ISS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0019903 GO:GO:0000164
HOGENOM:HOG000116557 GeneTree:ENSGT00600000084236 EMBL:BC148097
IPI:IPI00729412 RefSeq:NP_001095413.1 UniGene:Bt.72530
ProteinModelPortal:A6QLV3 PRIDE:A6QLV3 Ensembl:ENSBTAT00000010138
GeneID:511417 KEGG:bta:511417 CTD:8036 HOVERGEN:HBG055661
InParanoid:A6QLV3 OMA:LPHGIGN OrthoDB:EOG408N7W NextBio:20869918
ArrayExpress:A6QLV3 PANTHER:PTHR23155:SF38 Uniprot:A6QLV3
Length = 582
Score = 110 (43.8 bits), Expect = 0.00072, P = 0.00072
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 12 LSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAELA 71
L N + ++ D++ N+ ++++L L ++ I SL C+ L+EL L +N+I TLP L
Sbjct: 268 LQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 327
Query: 72 FNK-KLQNLDLGKN 84
+ KL +L L +N
Sbjct: 328 SSLVKLNSLTLARN 341
>UNIPROTKB|Q9UQ13 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9606 "Homo sapiens" [GO:0008543 "fibroblast growth factor
receptor signaling pathway" evidence=NAS] [GO:0005737 "cytoplasm"
evidence=IDA;NAS] [GO:0007265 "Ras protein signal transduction"
evidence=NAS] [GO:0019888 "protein phosphatase regulator activity"
evidence=TAS] [GO:0019903 "protein phosphatase binding"
evidence=IDA] [GO:0046579 "positive regulation of Ras protein
signal transduction" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000164 "protein phosphatase type 1 complex"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036
PROSITE:PS51450 GO:GO:0005634 GO:GO:0008543 GO:GO:0007265
GO:GO:0019888 EMBL:CH471066 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 EMBL:AL158163 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HOGENOM:HOG000116557
CTD:8036 HOVERGEN:HBG055661 OMA:LPHGIGN OrthoDB:EOG408N7W
PANTHER:PTHR23155:SF38 EMBL:AF068920 EMBL:AF054828 EMBL:AB020669
EMBL:AK090820 EMBL:AK292833 EMBL:BC050445 IPI:IPI00298928
IPI:IPI00479890 RefSeq:NP_001255968.1 RefSeq:NP_031399.2
UniGene:Hs.104315 ProteinModelPortal:Q9UQ13 SMR:Q9UQ13
IntAct:Q9UQ13 STRING:Q9UQ13 PhosphoSite:Q9UQ13 DMDM:14423936
PaxDb:Q9UQ13 PeptideAtlas:Q9UQ13 PRIDE:Q9UQ13
Ensembl:ENST00000265277 Ensembl:ENST00000369452
Ensembl:ENST00000451838 GeneID:8036 KEGG:hsa:8036 UCSC:uc001kzl.4
UCSC:uc001kzn.3 GeneCards:GC10P112679 HGNC:HGNC:15454 HPA:HPA009164
MIM:602775 MIM:607721 neXtProt:NX_Q9UQ13 Orphanet:2701
PharmGKB:PA37960 InParanoid:Q9UQ13 PhylomeDB:Q9UQ13 ChiTaRS:SHOC2
GenomeRNAi:8036 NextBio:30623 Bgee:Q9UQ13 CleanEx:HS_SHOC2
Genevestigator:Q9UQ13 GermOnline:ENSG00000108061 Uniprot:Q9UQ13
Length = 582
Score = 110 (43.8 bits), Expect = 0.00072, P = 0.00072
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 12 LSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAELA 71
L N + ++ D++ N+ ++++L L ++ I SL C+ L+EL L +N+I TLP L
Sbjct: 268 LQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 327
Query: 72 FNK-KLQNLDLGKN 84
+ KL +L L +N
Sbjct: 328 SSLVKLNSLTLARN 341
>UNIPROTKB|F2Z5G0 [details] [associations]
symbol:SHOC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046579 "positive regulation of Ras protein signal
transduction" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000164 "protein phosphatase type 1 complex" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
GO:GO:0005634 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0000164
GeneTree:ENSGT00600000084236 CTD:8036 OMA:LPHGIGN
PANTHER:PTHR23155:SF38 EMBL:CT737336 RefSeq:XP_001927528.1
UniGene:Ssc.83770 ProteinModelPortal:F2Z5G0 SMR:F2Z5G0 PRIDE:F2Z5G0
Ensembl:ENSSSCT00000011624 GeneID:100155918 KEGG:ssc:100155918
Uniprot:F2Z5G0
Length = 582
Score = 110 (43.8 bits), Expect = 0.00072, P = 0.00072
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 12 LSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAELA 71
L N + ++ D++ N+ ++++L L ++ I SL C+ L+EL L +N+I TLP L
Sbjct: 268 LQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 327
Query: 72 FNK-KLQNLDLGKN 84
+ KL +L L +N
Sbjct: 328 SSLVKLNSLTLARN 341
>UNIPROTKB|Q5RAV5 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9601 "Pongo abelii" [GO:0000164 "protein phosphatase type 1
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0046579 "positive regulation
of Ras protein signal transduction" evidence=ISS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359
HOGENOM:HOG000116557 GeneTree:ENSGT00600000084236 CTD:8036
HOVERGEN:HBG055661 OMA:LPHGIGN PANTHER:PTHR23155:SF38 EMBL:CR858906
EMBL:CR860532 EMBL:CR860795 EMBL:CR861437 RefSeq:NP_001126707.1
RefSeq:NP_001128872.1 UniGene:Pab.17963 UniGene:Pab.19685
ProteinModelPortal:Q5RAV5 SMR:Q5RAV5 PRIDE:Q5RAV5
Ensembl:ENSPPYT00000003192 GeneID:100173707 GeneID:100189801
KEGG:pon:100173707 KEGG:pon:100189801 InParanoid:Q5R5R1
Uniprot:Q5RAV5
Length = 582
Score = 110 (43.8 bits), Expect = 0.00072, P = 0.00072
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 12 LSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAELA 71
L N + ++ D++ N+ ++++L L ++ I SL C+ L+EL L +N+I TLP L
Sbjct: 268 LQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 327
Query: 72 FNK-KLQNLDLGKN 84
+ KL +L L +N
Sbjct: 328 SSLVKLNSLTLARN 341
>GENEDB_PFALCIPARUM|PFI1470c [details] [associations]
symbol:PFI1470c "leucine-rich repeat protein 8,
LRR8" species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR025875
Pfam:PF12799 EMBL:AL844508 RefSeq:XP_002808972.1
ProteinModelPortal:C0H576 EnsemblProtists:PFI1470c:mRNA
GeneID:813574 KEGG:pfa:PFI1470c EuPathDB:PlasmoDB:PF3D7_0930100
ProtClustDB:CLSZ2500613 Uniprot:C0H576
Length = 639
Score = 110 (43.8 bits), Expect = 0.00081, P = 0.00081
Identities = 42/146 (28%), Positives = 70/146 (47%)
Query: 12 LSRNPIREIG--DSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAE 69
L+ N I ++ + L+N+K LS SN +++ I +L + L+EL L +N+I+ +
Sbjct: 103 LNNNFIEDLENLEELINLKI---LSASNNKIKKI-KNLNNLHNLRELNLHNNEIERIE-N 157
Query: 70 LAFNKKLQNLDLGKNLITRWSEXXXXXXXXXXXXXXXQGNPVAEYDKLAKKV-KNLLPSL 128
L+ NKKLQ L L N I + NP+ +L V KNL+ ++
Sbjct: 158 LSNNKKLQILILSNNYIKHMEDIIYLKCLDKLKFLNIMNNPICNIPELQNCVIKNLI-NI 216
Query: 129 HIFNARPINRITKNEKDNIVDKVNDS 154
FN ++ + K K +I ND+
Sbjct: 217 KYFNNIILSSLKKVHKKDIYIHPNDN 242
>UNIPROTKB|C0H576 [details] [associations]
symbol:PFI1470c "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR025875
Pfam:PF12799 EMBL:AL844508 RefSeq:XP_002808972.1
ProteinModelPortal:C0H576 EnsemblProtists:PFI1470c:mRNA
GeneID:813574 KEGG:pfa:PFI1470c EuPathDB:PlasmoDB:PF3D7_0930100
ProtClustDB:CLSZ2500613 Uniprot:C0H576
Length = 639
Score = 110 (43.8 bits), Expect = 0.00081, P = 0.00081
Identities = 42/146 (28%), Positives = 70/146 (47%)
Query: 12 LSRNPIREIG--DSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAE 69
L+ N I ++ + L+N+K LS SN +++ I +L + L+EL L +N+I+ +
Sbjct: 103 LNNNFIEDLENLEELINLKI---LSASNNKIKKI-KNLNNLHNLRELNLHNNEIERIE-N 157
Query: 70 LAFNKKLQNLDLGKNLITRWSEXXXXXXXXXXXXXXXQGNPVAEYDKLAKKV-KNLLPSL 128
L+ NKKLQ L L N I + NP+ +L V KNL+ ++
Sbjct: 158 LSNNKKLQILILSNNYIKHMEDIIYLKCLDKLKFLNIMNNPICNIPELQNCVIKNLI-NI 216
Query: 129 HIFNARPINRITKNEKDNIVDKVNDS 154
FN ++ + K K +I ND+
Sbjct: 217 KYFNNIILSSLKKVHKKDIYIHPNDN 242
>MGI|MGI:1913856 [details] [associations]
symbol:Lrrc57 "leucine rich repeat containing 57"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1913856 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 HOGENOM:HOG000116557
HOVERGEN:HBG054710 OrthoDB:EOG4F1X40 EMBL:AK003037 EMBL:AK003592
IPI:IPI00623216 UniGene:Mm.428639 ProteinModelPortal:Q9D1G5
SMR:Q9D1G5 PhosphoSite:Q9D1G5 PaxDb:Q9D1G5 PRIDE:Q9D1G5
InParanoid:Q9D1G5 ChiTaRS:LRRC57 CleanEx:MM_LRRC57
Genevestigator:Q9D1G5 GermOnline:ENSMUSG00000027286 Uniprot:Q9D1G5
Length = 239
Score = 104 (41.7 bits), Expect = 0.00089, P = 0.00089
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 12 LSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAELA 71
L+ N + + D L N+K + LSL+N ++ + S+ + LK L L+ N + LP +L
Sbjct: 69 LNNNKLTVLPDELCNLKKLETLSLNNNHLRELPSTFGQLSALKTLSLSGNQLGALPPQLC 128
Query: 72 FNKKLQNLDLGKNLI 86
+ L +DL KN I
Sbjct: 129 CLRHLDVVDLSKNQI 143
>UNIPROTKB|Q8AVI4 [details] [associations]
symbol:shoc2 "Leucine-rich repeat protein SHOC-2"
species:8355 "Xenopus laevis" [GO:0000164 "protein phosphatase type
1 complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0046579 "positive regulation
of Ras protein signal transduction" evidence=ISS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359 CTD:8036
PANTHER:PTHR23155:SF38 EMBL:BC042263 RefSeq:NP_001080350.1
UniGene:Xl.21982 ProteinModelPortal:Q8AVI4 GeneID:380042
KEGG:xla:380042 Xenbase:XB-GENE-493506 Uniprot:Q8AVI4
Length = 577
Score = 109 (43.4 bits), Expect = 0.00096, P = 0.00096
Identities = 24/74 (32%), Positives = 44/74 (59%)
Query: 12 LSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAELA 71
L N + ++ D++ N+ ++++L L ++ + SL C+EL EL L +N+I TLP L
Sbjct: 263 LQHNELLDLPDTIGNLSSLSRLGLRYNRLSAVPRSLSKCSELDELNLENNNISTLPEGLL 322
Query: 72 FNK-KLQNLDLGKN 84
+ K+ +L L +N
Sbjct: 323 SSLVKVNSLTLARN 336
>MGI|MGI:1927197 [details] [associations]
symbol:Shoc2 "soc-2 (suppressor of clear) homolog (C.
elegans)" species:10090 "Mus musculus" [GO:0000164 "protein
phosphatase type 1 complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0019903
"protein phosphatase binding" evidence=ISO] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
EMBL:AF068921 MGI:MGI:1927197 GO:GO:0005634 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HOGENOM:HOG000116557
GeneTree:ENSGT00600000084236 CTD:8036 HOVERGEN:HBG055661
OMA:LPHGIGN OrthoDB:EOG408N7W PANTHER:PTHR23155:SF38 EMBL:DQ479926
EMBL:AK077798 EMBL:AK146447 EMBL:BC013722 EMBL:BC049775
EMBL:BC083060 IPI:IPI00131754 RefSeq:NP_001161977.1
RefSeq:NP_062632.2 UniGene:Mm.228669 ProteinModelPortal:O88520
SMR:O88520 IntAct:O88520 STRING:O88520 PhosphoSite:O88520
PaxDb:O88520 PRIDE:O88520 Ensembl:ENSMUST00000025932
Ensembl:ENSMUST00000169861 GeneID:56392 KEGG:mmu:56392
UCSC:uc008hxg.2 InParanoid:Q91VH8 NextBio:312492 Bgee:O88520
CleanEx:MM_SHOC2 Genevestigator:O88520
GermOnline:ENSMUSG00000024976 Uniprot:O88520
Length = 582
Score = 109 (43.4 bits), Expect = 0.00097, P = 0.00097
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 12 LSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAELA 71
L N + ++ D++ N+ ++ +L L ++ I SL C+ L+EL L +N+I TLP L
Sbjct: 268 LQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 327
Query: 72 FNK-KLQNLDLGKN 84
+ KL +L L +N
Sbjct: 328 SSLVKLNSLTLARN 341
>RGD|1308146 [details] [associations]
symbol:Shoc2 "soc-2 (suppressor of clear) homolog (C. elegans)"
species:10116 "Rattus norvegicus" [GO:0000164 "protein phosphatase
type 1 complex" evidence=IEA;ISO;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0019903 "protein phosphatase binding" evidence=IEA;ISO;ISS]
[GO:0046579 "positive regulation of Ras protein signal
transduction" evidence=IEA;ISO;ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 RGD:1308146 GO:GO:0005634
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359
HOGENOM:HOG000116557 CTD:8036 HOVERGEN:HBG055661 OrthoDB:EOG408N7W
PANTHER:PTHR23155:SF38 EMBL:BC079032 IPI:IPI00464721
RefSeq:NP_001013173.1 UniGene:Rn.156055 ProteinModelPortal:Q6AYI5
PRIDE:Q6AYI5 GeneID:309548 KEGG:rno:309548 UCSC:RGD:1308146
InParanoid:Q6AYI5 NextBio:660958 ArrayExpress:Q6AYI5
Genevestigator:Q6AYI5 Uniprot:Q6AYI5
Length = 582
Score = 109 (43.4 bits), Expect = 0.00097, P = 0.00097
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 12 LSRNPIREIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLAHNDIKTLPAELA 71
L N + ++ D++ N+ ++ +L L ++ I SL C+ L+EL L +N+I TLP L
Sbjct: 268 LQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 327
Query: 72 FNK-KLQNLDLGKN 84
+ KL +L L +N
Sbjct: 328 SSLVKLNSLTLARN 341
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.373 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 222 184 0.00078 110 3 11 23 0.48 32
31 0.40 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 30
No. of states in DFA: 589 (63 KB)
Total size of DFA: 155 KB (2093 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.95u 0.08s 21.03t Elapsed: 00:00:01
Total cpu time: 20.95u 0.08s 21.03t Elapsed: 00:00:01
Start: Fri May 10 22:33:39 2013 End: Fri May 10 22:33:40 2013