Query 027558
Match_columns 222
No_of_seqs 119 out of 529
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 19:53:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027558.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027558hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iqu_A 14-3-3 protein sigma; s 100.0 3.9E-86 1.3E-90 571.1 18.9 208 8-218 3-211 (236)
2 3uzd_A 14-3-3 protein gamma; s 100.0 5.3E-85 1.8E-89 567.3 19.8 205 11-218 3-209 (248)
3 3ubw_A 14-3-3E, 14-3-3 protein 100.0 6.4E-85 2.2E-89 569.2 19.7 205 10-217 29-233 (261)
4 2br9_A 14-3-3E, 14-3-3 protein 100.0 2.6E-83 9.1E-88 553.9 19.5 205 11-218 4-208 (234)
5 1o9d_A 14-3-3-like protein C; 100.0 1.5E-82 5.2E-87 555.8 19.8 209 8-217 4-212 (260)
6 2npm_A 14-3-3 domain containin 100.0 7.8E-82 2.7E-86 551.0 19.6 208 10-218 26-233 (260)
7 3efz_A 14-3-3 protein; 14-3-3, 100.0 3.3E-81 1.1E-85 547.1 14.0 200 11-217 28-234 (268)
8 2o8p_A 14-3-3 domain containin 100.0 4.9E-79 1.7E-83 523.2 18.3 190 11-213 2-198 (227)
9 3edt_B KLC 2, kinesin light ch 95.7 0.58 2E-05 36.9 16.1 154 14-212 45-198 (283)
10 3nf1_A KLC 1, kinesin light ch 95.7 0.66 2.3E-05 37.3 18.9 185 13-212 28-224 (311)
11 3vtx_A MAMA; tetratricopeptide 95.6 0.52 1.8E-05 35.6 16.4 162 13-211 6-169 (184)
12 2qfc_A PLCR protein; TPR, HTH, 94.5 1.7 5.8E-05 35.9 15.3 76 126-213 151-226 (293)
13 3u3w_A Transcriptional activat 94.4 1.8 6.2E-05 35.7 16.5 72 130-213 155-226 (293)
14 3sf4_A G-protein-signaling mod 94.3 2 6.9E-05 35.8 19.1 190 11-212 8-216 (406)
15 4a1s_A PINS, partner of inscut 94.1 2.4 8.1E-05 35.9 20.0 188 13-212 49-252 (411)
16 3n71_A Histone lysine methyltr 93.7 0.25 8.4E-06 46.0 9.0 102 102-217 326-427 (490)
17 3hym_B Cell division cycle pro 93.2 2.8 9.4E-05 33.8 16.3 173 13-212 126-299 (330)
18 3qwp_A SET and MYND domain-con 93.1 0.23 8E-06 45.2 7.7 56 157-213 346-401 (429)
19 4i17_A Hypothetical protein; T 93.0 2.1 7.3E-05 33.3 12.4 59 13-75 8-66 (228)
20 3u4t_A TPR repeat-containing p 92.7 3 0.0001 32.9 14.2 53 158-211 197-249 (272)
21 3qww_A SET and MYND domain-con 92.5 0.49 1.7E-05 43.2 8.9 99 102-214 315-413 (433)
22 4b4t_Q 26S proteasome regulato 92.5 4.6 0.00016 34.4 15.9 178 15-213 58-246 (434)
23 3edt_B KLC 2, kinesin light ch 92.4 0.65 2.2E-05 36.5 8.7 56 157-213 102-157 (283)
24 3ro2_A PINS homolog, G-protein 92.0 3.8 0.00013 32.6 19.2 188 13-213 6-213 (338)
25 1fch_A Peroxisomal targeting s 92.0 3.3 0.00011 34.3 12.9 59 13-76 99-157 (368)
26 3ulq_A Response regulator aspa 91.9 5.2 0.00018 33.9 16.6 174 18-213 109-294 (383)
27 3qww_A SET and MYND domain-con 91.4 0.26 8.8E-06 45.1 5.7 60 157-217 315-374 (433)
28 3n71_A Histone lysine methyltr 90.9 0.3 1E-05 45.4 5.7 62 157-219 326-387 (490)
29 2gw1_A Mitochondrial precursor 90.7 7.6 0.00026 33.5 14.6 56 156-212 205-266 (514)
30 4g1t_A Interferon-induced prot 90.6 7.7 0.00026 33.4 15.1 49 157-210 351-399 (472)
31 2xpi_A Anaphase-promoting comp 90.6 8.9 0.00031 34.1 17.5 47 156-211 532-578 (597)
32 3q15_A PSP28, response regulat 90.2 0.76 2.6E-05 39.4 7.4 74 127-213 98-171 (378)
33 3ulq_A Response regulator aspa 89.9 1.7 5.8E-05 37.0 9.3 73 128-213 101-173 (383)
34 3ieg_A DNAJ homolog subfamily 89.9 6.8 0.00023 31.7 17.6 48 156-212 288-335 (359)
35 3sf4_A G-protein-signaling mod 89.4 8.2 0.00028 32.0 17.4 177 14-212 49-256 (406)
36 4abn_A Tetratricopeptide repea 89.1 12 0.00041 33.5 15.3 173 13-211 103-286 (474)
37 2q7f_A YRRB protein; TPR, prot 89.0 6.4 0.00022 30.2 15.3 163 12-211 57-221 (243)
38 2y4t_A DNAJ homolog subfamily 88.7 10 0.00035 32.2 15.6 47 156-211 311-357 (450)
39 2pl2_A Hypothetical conserved 88.6 7.5 0.00026 30.5 12.2 44 157-209 168-211 (217)
40 3u4t_A TPR repeat-containing p 88.6 6 0.00021 31.1 11.2 30 13-42 4-33 (272)
41 3ro2_A PINS homolog, G-protein 88.2 8.4 0.00029 30.6 16.7 53 157-212 200-252 (338)
42 3fp2_A TPR repeat-containing p 88.2 12 0.00042 32.5 16.0 48 156-212 444-491 (537)
43 3ro3_A PINS homolog, G-protein 88.2 5.1 0.00017 28.1 13.1 55 156-213 105-159 (164)
44 4eqf_A PEX5-related protein; a 87.3 7.5 0.00026 32.3 11.5 173 18-216 183-360 (365)
45 3qwp_A SET and MYND domain-con 87.2 0.41 1.4E-05 43.5 3.7 56 157-213 304-359 (429)
46 2gw1_A Mitochondrial precursor 87.0 14 0.00047 31.8 14.1 173 13-212 305-478 (514)
47 4gcn_A Protein STI-1; structur 87.0 1.3 4.6E-05 32.1 5.9 47 156-211 24-70 (127)
48 3qky_A Outer membrane assembly 87.0 10 0.00035 30.1 15.6 186 11-211 14-223 (261)
49 2ho1_A Type 4 fimbrial biogene 86.3 10 0.00034 29.4 15.0 57 14-75 39-95 (252)
50 4gyw_A UDP-N-acetylglucosamine 86.1 20 0.00068 34.6 15.1 46 13-62 10-55 (723)
51 4a1s_A PINS, partner of inscut 85.6 15 0.00051 30.8 16.3 180 14-213 88-293 (411)
52 3ro3_A PINS homolog, G-protein 85.2 4.9 0.00017 28.1 8.1 72 129-213 48-119 (164)
53 4eqf_A PEX5-related protein; a 85.2 15 0.00051 30.4 15.6 59 13-76 66-124 (365)
54 2y4t_A DNAJ homolog subfamily 85.1 17 0.00057 30.9 15.5 172 16-211 147-323 (450)
55 3fp2_A TPR repeat-containing p 83.3 22 0.00075 30.9 15.0 162 15-213 246-408 (537)
56 2vq2_A PILW, putative fimbrial 82.9 13 0.00043 27.8 15.3 59 13-76 9-67 (225)
57 2ifu_A Gamma-SNAP; membrane fu 82.9 19 0.00064 29.8 13.6 25 18-42 42-66 (307)
58 1fch_A Peroxisomal targeting s 82.8 18 0.00063 29.5 17.6 58 13-75 65-122 (368)
59 2xpi_A Anaphase-promoting comp 82.0 27 0.00092 30.9 18.5 54 156-212 491-545 (597)
60 1xnf_A Lipoprotein NLPI; TPR, 81.9 16 0.00056 28.4 13.0 30 182-212 215-244 (275)
61 3rkv_A Putative peptidylprolyl 80.7 1.8 6.1E-05 32.1 4.3 55 156-211 27-91 (162)
62 2pl2_A Hypothetical conserved 80.7 18 0.00062 28.2 17.5 168 11-211 4-179 (217)
63 3cv0_A Peroxisome targeting si 80.6 20 0.00068 28.5 15.6 30 13-42 22-51 (327)
64 3uq3_A Heat shock protein STI1 80.2 18 0.0006 27.7 14.5 30 13-42 80-109 (258)
65 2q7f_A YRRB protein; TPR, prot 80.1 17 0.0006 27.6 11.1 164 13-212 24-188 (243)
66 2ifu_A Gamma-SNAP; membrane fu 80.0 24 0.00082 29.1 13.1 51 156-210 171-222 (307)
67 3ieg_A DNAJ homolog subfamily 79.9 22 0.00075 28.6 16.8 167 16-211 124-300 (359)
68 1qqe_A Vesicular transport pro 79.3 24 0.00084 28.8 12.8 53 156-212 134-187 (292)
69 4gco_A Protein STI-1; structur 79.1 4.4 0.00015 29.3 5.9 45 157-210 30-74 (126)
70 3uq3_A Heat shock protein STI1 78.7 20 0.00067 27.4 15.5 30 13-42 39-68 (258)
71 1qqe_A Vesicular transport pro 77.9 27 0.00093 28.5 13.0 29 14-42 39-67 (292)
72 2l6j_A TPR repeat-containing p 77.8 7 0.00024 26.1 6.3 47 157-212 21-67 (111)
73 3hym_B Cell division cycle pro 76.4 27 0.00092 27.8 16.7 56 156-212 209-265 (330)
74 3nf1_A KLC 1, kinesin light ch 75.7 27 0.00093 27.4 18.9 183 14-211 71-306 (311)
75 1elr_A TPR2A-domain of HOP; HO 75.5 6 0.00021 26.8 5.5 54 157-212 55-108 (131)
76 3lf9_A 4E10_D0_1IS1A_001_C (T1 75.2 12 0.00042 28.5 7.3 50 26-75 11-60 (121)
77 4gcn_A Protein STI-1; structur 74.8 6.9 0.00024 28.1 5.9 53 157-211 59-111 (127)
78 4g1t_A Interferon-induced prot 73.1 7.1 0.00024 33.6 6.5 53 157-210 68-121 (472)
79 3u3w_A Transcriptional activat 72.7 15 0.00052 29.9 8.2 69 130-212 115-184 (293)
80 2e2e_A Formate-dependent nitri 72.6 26 0.00088 25.7 11.9 45 158-211 99-143 (177)
81 1na3_A Designed protein CTPR2; 72.2 11 0.00036 24.2 5.9 47 156-211 25-71 (91)
82 1hz4_A MALT regulatory protein 71.8 9.3 0.00032 31.9 6.8 56 157-213 110-165 (373)
83 3gw4_A Uncharacterized protein 71.7 28 0.00094 25.7 9.2 72 128-212 64-136 (203)
84 3sz7_A HSC70 cochaperone (SGT) 71.5 12 0.0004 27.5 6.7 46 157-211 62-107 (164)
85 3upv_A Heat shock protein STI1 70.7 23 0.00079 24.4 11.3 30 13-42 5-34 (126)
86 2xev_A YBGF; tetratricopeptide 69.9 13 0.00046 25.4 6.4 49 157-211 56-104 (129)
87 3ma5_A Tetratricopeptide repea 69.6 11 0.00038 25.7 5.7 48 156-212 23-70 (100)
88 3k9i_A BH0479 protein; putativ 69.3 13 0.00046 25.7 6.3 47 157-212 44-90 (117)
89 3cv0_A Peroxisome targeting si 69.2 41 0.0014 26.6 15.5 31 12-42 55-85 (327)
90 3qky_A Outer membrane assembly 68.9 40 0.0014 26.5 11.4 63 16-79 152-223 (261)
91 2kck_A TPR repeat; tetratricop 68.6 16 0.00053 23.9 6.2 46 157-211 23-68 (112)
92 2dba_A Smooth muscle cell asso 66.6 9.9 0.00034 26.5 5.1 24 186-210 103-126 (148)
93 2kc7_A BFR218_protein; tetratr 66.6 19 0.00065 23.6 6.4 47 157-211 17-63 (99)
94 2ho1_A Type 4 fimbrial biogene 65.6 43 0.0015 25.6 15.2 62 12-78 71-132 (252)
95 1xi4_A Clathrin heavy chain; a 65.0 28 0.00096 37.1 9.7 24 187-210 1284-1307(1630)
96 3as5_A MAMA; tetratricopeptide 64.6 35 0.0012 24.2 14.9 161 14-211 10-172 (186)
97 2yhc_A BAMD, UPF0169 lipoprote 63.8 49 0.0017 25.6 19.3 64 13-78 5-68 (225)
98 3q15_A PSP28, response regulat 63.4 65 0.0022 26.9 19.1 54 156-213 238-291 (378)
99 1w3b_A UDP-N-acetylglucosamine 63.3 63 0.0022 26.7 14.0 30 13-42 68-97 (388)
100 1elw_A TPR1-domain of HOP; HOP 63.3 23 0.0008 23.1 6.3 47 157-212 55-101 (118)
101 3gw4_A Uncharacterized protein 63.1 42 0.0014 24.6 15.4 73 128-213 105-177 (203)
102 3upv_A Heat shock protein STI1 62.6 18 0.00063 24.9 5.9 25 185-210 41-65 (126)
103 2lni_A Stress-induced-phosphop 62.5 19 0.00066 24.3 5.9 47 157-212 67-113 (133)
104 4gco_A Protein STI-1; structur 62.4 18 0.00061 25.9 5.9 47 156-211 63-109 (126)
105 1elr_A TPR2A-domain of HOP; HO 60.7 22 0.00076 23.8 5.9 49 156-213 20-68 (131)
106 4gyw_A UDP-N-acetylglucosamine 60.6 1.2E+02 0.0041 29.1 14.1 33 13-48 44-76 (723)
107 2hr2_A Hypothetical protein; a 60.4 22 0.00076 27.9 6.5 54 156-211 27-85 (159)
108 2v5f_A Prolyl 4-hydroxylase su 60.0 39 0.0013 23.3 7.2 53 157-211 22-74 (104)
109 1p5q_A FKBP52, FK506-binding p 59.9 77 0.0026 26.6 10.5 29 14-42 149-177 (336)
110 3bee_A Putative YFRE protein; 59.7 11 0.00037 26.3 4.1 30 13-42 44-73 (93)
111 3q49_B STIP1 homology and U bo 59.1 27 0.00091 24.1 6.2 25 186-211 81-105 (137)
112 2kat_A Uncharacterized protein 58.8 24 0.00084 23.9 5.9 47 156-211 35-81 (115)
113 3vtx_A MAMA; tetratricopeptide 58.5 24 0.00083 25.9 6.2 47 156-211 21-67 (184)
114 2kat_A Uncharacterized protein 58.2 40 0.0014 22.8 11.3 60 12-76 19-78 (115)
115 1ihg_A Cyclophilin 40; ppiase 57.6 14 0.00048 32.1 5.4 54 157-211 240-301 (370)
116 3ma5_A Tetratricopeptide repea 56.6 42 0.0014 22.5 10.2 57 13-74 8-64 (100)
117 4ga2_A E3 SUMO-protein ligase 56.2 31 0.0011 25.2 6.4 28 15-42 34-61 (150)
118 2vyi_A SGTA protein; chaperone 55.9 30 0.001 23.0 5.9 26 185-211 83-108 (131)
119 2vyi_A SGTA protein; chaperone 55.3 31 0.0011 22.9 5.9 29 14-42 14-42 (131)
120 2vgx_A Chaperone SYCD; alterna 55.3 28 0.00097 25.5 6.1 46 157-211 72-117 (148)
121 1elw_A TPR1-domain of HOP; HOP 55.2 33 0.0011 22.4 5.9 48 156-212 20-67 (118)
122 3rkv_A Putative peptidylprolyl 54.8 57 0.0019 23.5 8.8 46 157-211 80-125 (162)
123 1a17_A Serine/threonine protei 54.1 30 0.001 24.5 5.9 27 15-41 16-42 (166)
124 1w3b_A UDP-N-acetylglucosamine 53.4 95 0.0032 25.6 14.5 46 12-61 33-78 (388)
125 1lyp_A CAP18; lipopolysacchari 53.0 29 0.001 19.7 4.3 27 91-117 4-30 (32)
126 4gfq_A Ribosome-recycling fact 52.8 26 0.00089 29.1 5.8 69 46-119 127-199 (209)
127 4ga2_A E3 SUMO-protein ligase 52.4 31 0.0011 25.2 5.9 45 157-210 48-92 (150)
128 3k9i_A BH0479 protein; putativ 52.4 44 0.0015 22.8 6.5 58 13-75 28-85 (117)
129 2xcb_A PCRH, regulatory protei 52.1 32 0.0011 24.6 5.8 46 157-211 69-114 (142)
130 2h6f_A Protein farnesyltransfe 52.1 1.2E+02 0.0041 26.4 13.3 58 13-75 98-156 (382)
131 1na0_A Designed protein CTPR3; 51.9 38 0.0013 22.2 5.9 26 185-211 80-105 (125)
132 2dba_A Smooth muscle cell asso 51.6 42 0.0014 23.1 6.2 31 12-42 28-58 (148)
133 3sz7_A HSC70 cochaperone (SGT) 51.5 65 0.0022 23.2 11.3 27 15-41 14-40 (164)
134 1na0_A Designed protein CTPR3; 51.1 40 0.0014 22.1 5.9 29 14-42 11-39 (125)
135 2qfc_A PLCR protein; TPR, HTH, 50.8 37 0.0013 27.5 6.6 174 14-210 77-264 (293)
136 2c2l_A CHIP, carboxy terminus 50.6 36 0.0012 27.8 6.5 24 186-210 42-65 (281)
137 1ya0_A SMG-7 transcript varian 50.3 42 0.0015 31.1 7.5 26 135-170 157-182 (497)
138 1a17_A Serine/threonine protei 50.0 37 0.0013 23.9 5.8 27 184-211 83-109 (166)
139 3gyz_A Chaperone protein IPGC; 49.5 28 0.00096 26.1 5.3 47 156-211 86-132 (151)
140 1hh8_A P67PHOX, NCF-2, neutrop 48.0 38 0.0013 25.3 5.9 48 156-212 53-100 (213)
141 2fbn_A 70 kDa peptidylprolyl i 47.0 40 0.0014 25.4 5.9 46 157-211 105-150 (198)
142 1hxi_A PEX5, peroxisome target 46.8 33 0.0011 24.1 5.1 46 157-211 68-113 (121)
143 1xnf_A Lipoprotein NLPI; TPR, 45.7 99 0.0034 23.6 14.0 59 13-76 44-102 (275)
144 3urz_A Uncharacterized protein 45.6 42 0.0014 25.7 5.9 31 12-42 4-34 (208)
145 4abn_A Tetratricopeptide repea 45.4 1.6E+02 0.0055 25.9 13.2 160 24-211 80-249 (474)
146 1dd5_A Ribosome recycling fact 45.0 44 0.0015 27.1 5.9 69 46-119 103-175 (185)
147 2hr2_A Hypothetical protein; a 44.6 27 0.00093 27.4 4.6 54 157-211 74-130 (159)
148 1p5q_A FKBP52, FK506-binding p 43.9 14 0.00047 31.4 2.9 54 157-211 164-224 (336)
149 1wao_1 Serine/threonine protei 43.5 37 0.0013 30.5 5.9 24 186-210 78-101 (477)
150 1kt0_A FKBP51, 51 kDa FK506-bi 43.2 27 0.00093 31.0 4.9 53 157-211 285-345 (457)
151 1ise_A Ribosome recycling fact 43.1 45 0.0016 27.0 5.8 69 46-119 103-175 (185)
152 1is1_A Ribosome recycling fact 42.8 48 0.0016 26.8 5.9 69 46-119 103-175 (185)
153 1ge9_A Ribosome recycling fact 42.1 67 0.0023 25.9 6.6 70 46-119 105-174 (184)
154 2ond_A Cleavage stimulation fa 42.1 1.4E+02 0.0047 24.2 15.1 51 156-211 219-269 (308)
155 1hh8_A P67PHOX, NCF-2, neutrop 42.0 45 0.0015 24.9 5.5 57 156-213 87-151 (213)
156 1wqg_A Ribosome recycling fact 41.4 52 0.0018 26.6 5.9 69 46-119 103-175 (185)
157 1zu2_A Mitochondrial import re 40.9 41 0.0014 26.3 5.0 70 136-210 42-118 (158)
158 2kc7_A BFR218_protein; tetratr 40.4 68 0.0023 20.7 5.6 28 15-42 3-30 (99)
159 1na3_A Designed protein CTPR2; 40.2 54 0.0018 20.5 4.9 60 13-77 10-69 (91)
160 3gyz_A Chaperone protein IPGC; 39.9 1.1E+02 0.0039 22.6 9.5 57 13-74 37-93 (151)
161 1hxi_A PEX5, peroxisome target 39.8 87 0.003 21.8 6.5 59 13-76 18-76 (121)
162 2kck_A TPR repeat; tetratricop 39.4 73 0.0025 20.3 8.1 27 16-42 44-70 (112)
163 2h6f_A Protein farnesyltransfe 39.3 1.9E+02 0.0065 25.0 14.5 48 14-65 202-249 (382)
164 1eh1_A Ribosome recycling fact 39.2 45 0.0016 27.0 5.2 73 46-119 104-176 (185)
165 3fm3_A Methionine aminopeptida 39.2 7.3 0.00025 34.6 0.4 27 195-221 44-70 (358)
166 2r5s_A Uncharacterized protein 38.6 74 0.0025 23.4 6.1 31 12-42 108-138 (176)
167 3caz_A BAR protein; thermo-aci 38.1 1.7E+02 0.0058 24.2 10.8 111 18-172 100-210 (294)
168 2vgx_A Chaperone SYCD; alterna 38.0 82 0.0028 22.8 6.2 46 157-211 38-83 (148)
169 2wb7_A PT26-6P; extra chromoso 37.4 79 0.0027 29.7 7.0 74 144-219 436-525 (526)
170 2l6j_A TPR repeat-containing p 37.0 48 0.0016 21.6 4.4 29 14-42 40-68 (111)
171 2wh5_A Acyl-COA-binding domain 35.4 41 0.0014 24.7 4.0 37 26-64 10-46 (106)
172 2ond_A Cleavage stimulation fa 33.2 1.1E+02 0.0037 24.9 6.8 47 157-211 116-162 (308)
173 3onj_A T-snare VTI1; helix, HA 33.1 1.3E+02 0.0045 21.3 8.5 79 28-110 10-91 (97)
174 2fbn_A 70 kDa peptidylprolyl i 30.9 1.3E+02 0.0045 22.3 6.5 61 13-78 89-149 (198)
175 2xev_A YBGF; tetratricopeptide 30.2 1.2E+02 0.0042 20.2 9.7 26 16-41 6-31 (129)
176 2pzi_A Probable serine/threoni 29.8 3.4E+02 0.012 25.2 10.7 152 24-211 403-562 (681)
177 2vsy_A XCC0866; transferase, g 29.6 3E+02 0.01 24.4 15.2 31 12-42 23-53 (568)
178 2vq2_A PILW, putative fimbrial 29.3 1.6E+02 0.0056 21.3 16.1 165 12-210 42-209 (225)
179 2xcb_A PCRH, regulatory protei 29.3 1.5E+02 0.005 20.8 10.2 29 14-42 20-48 (142)
180 2w2u_A Hypothetical P60 katani 28.0 77 0.0026 22.0 4.2 27 14-40 21-47 (83)
181 2e2e_A Formate-dependent nitri 27.8 1.5E+02 0.0051 21.3 6.2 48 156-211 60-109 (177)
182 1wao_1 Serine/threonine protei 26.8 90 0.0031 27.9 5.6 12 196-207 123-134 (477)
183 2w9y_A CE-FAR-7, fatty acid/re 26.7 97 0.0033 24.0 4.9 76 101-179 59-136 (140)
184 4fuk_A Methionine aminopeptida 26.4 20 0.00069 31.2 1.1 24 198-221 71-94 (337)
185 2g0u_A Type III secretion syst 25.6 26 0.00088 25.4 1.3 53 137-193 12-68 (92)
186 4i17_A Hypothetical protein; T 24.1 2.3E+02 0.0078 21.2 14.6 59 13-76 43-101 (228)
187 2v6y_A AAA family ATPase, P60 23.9 1E+02 0.0035 21.2 4.2 27 14-40 13-39 (83)
188 1hbk_A ACBP, acyl-COA binding 23.4 1.9E+02 0.0066 20.1 6.1 35 26-64 4-38 (89)
189 3qou_A Protein YBBN; thioredox 22.7 1.5E+02 0.0051 23.9 5.8 31 12-42 219-249 (287)
190 2if4_A ATFKBP42; FKBP-like, al 22.0 1.6E+02 0.0054 24.6 6.0 46 157-211 247-292 (338)
191 3urz_A Uncharacterized protein 22.0 2.6E+02 0.0088 21.0 14.3 25 18-42 60-84 (208)
192 2qsr_A Transcription-repair co 21.4 2.2E+02 0.0074 22.3 6.2 57 4-64 17-76 (173)
193 2vsy_A XCC0866; transferase, g 20.8 1.5E+02 0.0052 26.4 5.9 18 25-42 2-19 (568)
194 2if4_A ATFKBP42; FKBP-like, al 20.3 1.2E+02 0.0042 25.3 4.9 49 157-211 196-258 (338)
195 3cjl_A Domain of unknown funct 20.1 53 0.0018 23.5 2.1 34 25-62 24-57 (88)
196 1tdp_A Carnobacteriocin B2 imm 20.1 2.7E+02 0.0091 20.7 6.0 67 53-137 9-82 (111)
No 1
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=3.9e-86 Score=571.06 Aligned_cols=208 Identities=55% Similarity=0.837 Sum_probs=202.8
Q ss_pred CCC-ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCC
Q 027558 8 TPS-PREENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGN 86 (222)
Q Consensus 8 m~~-~r~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~ 86 (222)
|+. +|+++||+|||+|||||||||+++||++++.+ ++||.||||||||||||+||++|+|||+|+++||+++.+|+
T Consensus 3 ~~~~~re~~v~~AklaeqaeRyddM~~~mk~v~~~~---~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~ 79 (236)
T 3iqu_A 3 MGSMERASLIQKAKLAEQAERYEDMAAFMKGAVEKG---EELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGS 79 (236)
T ss_dssp TTTSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTC
T ss_pred cccccHHHHHHHHHHHHHhccHHHHHHHHHHHHhcC---CcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCC
Confidence 443 79999999999999999999999999999998 99999999999999999999999999999999999988888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHH
Q 027558 87 EDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAA 166 (222)
Q Consensus 87 ~~~~~~i~~yk~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 166 (222)
+.+++.+++||++|++||..+|++|+++||++|||+++++|++|||+|||||||||+|||..|++|++++++|+++|++|
T Consensus 80 ~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A 159 (236)
T 3iqu_A 80 EEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEA 159 (236)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCccccccC
Q 027558 167 QDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKPEPKLIV 218 (222)
Q Consensus 167 ~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~Ai~~~~ 218 (222)
+++|+.+|||||||||||+||||||||||+|+|++||++||+|||+||++|-
T Consensus 160 ~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld 211 (236)
T 3iqu_A 160 MDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLH 211 (236)
T ss_dssp HHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhh
Confidence 9999989999999999999999999999999999999999999999999873
No 2
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=5.3e-85 Score=567.26 Aligned_cols=205 Identities=56% Similarity=0.876 Sum_probs=197.7
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChhhH
Q 027558 11 PREENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHV 90 (222)
Q Consensus 11 ~r~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~ 90 (222)
+|++++|+|||+|||||||||+++||++++.+ ++||.||||||||||||+||++|+|||+|+++||+++.+|++.++
T Consensus 3 ~re~lv~~AklaeqaeRyddM~~~Mk~v~~~~---~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~~~ 79 (248)
T 3uzd_A 3 DREQLVQKARLAEQAERYDDMAAAMKNVTELN---EPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKI 79 (248)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC---SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC-H
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC---CcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHHHH
Confidence 79999999999999999999999999999998 999999999999999999999999999999999999888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCC--chHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHH
Q 027558 91 STIRDYRSKIETELSSICDGILKLLDSRLIPCASSG--DSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQD 168 (222)
Q Consensus 91 ~~i~~yk~kie~EL~~~C~eil~lId~~Lip~~~~~--eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 168 (222)
+.+++||++|++||..+|++||++||++|||.++++ |++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 80 ~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~~ 159 (248)
T 3uzd_A 80 EMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHE 159 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCccccccC
Q 027558 169 IANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKPEPKLIV 218 (222)
Q Consensus 169 ~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~Ai~~~~ 218 (222)
+|+.+|||||||||||+||||||||||+|+|++||.+||+|||+||++|-
T Consensus 160 iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld 209 (248)
T 3uzd_A 160 ISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELD 209 (248)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGG
T ss_pred HHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhh
Confidence 99989999999999999999999999999999999999999999999873
No 3
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=6.4e-85 Score=569.18 Aligned_cols=205 Identities=72% Similarity=1.054 Sum_probs=201.3
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChhh
Q 027558 10 SPREENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDH 89 (222)
Q Consensus 10 ~~r~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~ 89 (222)
.+|++++|+|||+|||||||||+++||++++++ ++||.||||||||||||+||++|+|||+|+++||+++.+|++.+
T Consensus 29 ~~re~lv~~AKLaeqaeRYddMv~~MK~v~~~~---~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g~~~~ 105 (261)
T 3ubw_A 29 DDREDLVYQAKLAEQAERYDEMVESMKKVAGMD---VELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDK 105 (261)
T ss_dssp -CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC---SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred hhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcC---CcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccccHHH
Confidence 379999999999999999999999999999998 99999999999999999999999999999999999998899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHH
Q 027558 90 VSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDI 169 (222)
Q Consensus 90 ~~~i~~yk~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~ 169 (222)
++.+++||++|++||..+|++|+++||++|||+++++|++|||+|||||||||+|||..|++|++++++|+++|++|+++
T Consensus 106 ~~~i~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~i 185 (261)
T 3ubw_A 106 LKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDI 185 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCcccccc
Q 027558 170 ANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKPEPKLI 217 (222)
Q Consensus 170 a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~Ai~~~ 217 (222)
|+.+|||||||||||+||||||||||+|+|++||++||+|||+||++|
T Consensus 186 A~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eL 233 (261)
T 3ubw_A 186 AMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAEL 233 (261)
T ss_dssp HHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTG
T ss_pred HHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHh
Confidence 998999999999999999999999999999999999999999999987
No 4
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=2.6e-83 Score=553.87 Aligned_cols=205 Identities=72% Similarity=1.049 Sum_probs=201.2
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChhhH
Q 027558 11 PREENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHV 90 (222)
Q Consensus 11 ~r~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~ 90 (222)
+|++++|+|||++|+|||+||+++||++++.+ ++||.||||||||||||+||++|+|||+|+++||+++++|++.++
T Consensus 4 ~re~~v~~AklaeqaeRyddm~~~mk~v~~~~---~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~~~ 80 (234)
T 2br9_A 4 DREDLVYQAKLAEQAERYDEMVESMKKVAGMD---VELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKL 80 (234)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTC---SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred hHHHHHHHHHHHHHHhCHHHHHHHHHHHhccc---CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchHHH
Confidence 69999999999999999999999999999988 999999999999999999999999999999999999888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHHH
Q 027558 91 STIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIA 170 (222)
Q Consensus 91 ~~i~~yk~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 170 (222)
+.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|+++|
T Consensus 81 ~~i~~yr~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA 160 (234)
T 2br9_A 81 KMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIA 160 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCccccccC
Q 027558 171 NAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKPEPKLIV 218 (222)
Q Consensus 171 ~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~Ai~~~~ 218 (222)
+.+||||||+||||+||||||||||+|+|++||.+||+|||+||++|-
T Consensus 161 ~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~eld 208 (234)
T 2br9_A 161 MTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELD 208 (234)
T ss_dssp HHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGG
T ss_pred HccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhh
Confidence 989999999999999999999999999999999999999999999874
No 5
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=1.5e-82 Score=555.76 Aligned_cols=209 Identities=87% Similarity=1.244 Sum_probs=201.4
Q ss_pred CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCCh
Q 027558 8 TPSPREENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNE 87 (222)
Q Consensus 8 m~~~r~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~ 87 (222)
|+++|++++|+|||++|+|||+||+++||++++.+ .+++||.||||||||||||+||++|+|||+|+++||+++.+|++
T Consensus 4 ~~~~re~~v~~AkLaeqaeRyddm~~~mk~v~~~~-~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~k~~~ 82 (260)
T 1o9d_A 4 APTAREENVYMAKLAEQAERYEEMVEFMEKVSNSL-GSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNE 82 (260)
T ss_dssp -CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTC-SSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCH
T ss_pred ccccHHHHHHHHHHHHHhcCHHHHHHHHHHHHccC-CCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccCcH
Confidence 45679999999999999999999999999999864 23799999999999999999999999999999999999888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHH
Q 027558 88 DHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQ 167 (222)
Q Consensus 88 ~~~~~i~~yk~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~ 167 (222)
.+++.|++||++|++||..+|++||++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|+
T Consensus 83 ~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~ 162 (260)
T 1o9d_A 83 EHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQ 162 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCcccccc
Q 027558 168 DIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKPEPKLI 217 (222)
Q Consensus 168 ~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~Ai~~~ 217 (222)
++|+.+|||||||||||+||||||||||+|+|++||.+||+|||+||++|
T Consensus 163 ~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~el 212 (260)
T 1o9d_A 163 DIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAEL 212 (260)
T ss_dssp HHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhh
Confidence 99998999999999999999999999999999999999999999999986
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=7.8e-82 Score=550.96 Aligned_cols=208 Identities=61% Similarity=0.945 Sum_probs=199.2
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChhh
Q 027558 10 SPREENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDH 89 (222)
Q Consensus 10 ~~r~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~ 89 (222)
++|++++|+|||++|+|||+||+++||++++.++.+++||.||||||||||||+||++|+|||+|+++||+++.+|++.+
T Consensus 26 ~~re~~v~~AkLaeqaeRyddmv~~mk~v~~~~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~~~ 105 (260)
T 2npm_A 26 NARESNVYMAKLAEQAERYDEMAKYMKDVVEARQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAEDA 105 (260)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcHHH
Confidence 45999999999999999999999999999986422268999999999999999999999999999999999988888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHH
Q 027558 90 VSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDI 169 (222)
Q Consensus 90 ~~~i~~yk~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~ 169 (222)
++.|++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|+++
T Consensus 106 ~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~i 185 (260)
T 2npm_A 106 SKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATVV 185 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCccccccC
Q 027558 170 ANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKPEPKLIV 218 (222)
Q Consensus 170 a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~Ai~~~~ 218 (222)
| .+|||||||||||+||||||||||+|+|++||++||+|||+||++|-
T Consensus 186 A-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld 233 (260)
T 2npm_A 186 A-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQLD 233 (260)
T ss_dssp H-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTGG
T ss_pred H-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhh
Confidence 9 89999999999999999999999999999999999999999999874
No 7
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=3.3e-81 Score=547.15 Aligned_cols=200 Identities=23% Similarity=0.416 Sum_probs=172.6
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhh-hhcCC-hh
Q 027558 11 PREENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKE-ESRGN-ED 88 (222)
Q Consensus 11 ~r~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~-~~~~~-~~ 88 (222)
+|++++|+|||+|||||||||+++| ++++ ++||.||||||||||||+||++|+|||+|+++||++ +.+|+ +.
T Consensus 28 ~r~~lv~~AKLaeqaeRYddMv~~M---~e~~---~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~~ 101 (268)
T 3efz_A 28 KLSEGAYRAKLADMVGNYKDVIKVL---TESS---DFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNE 101 (268)
T ss_dssp ------------------CHHHHHH---TC--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHH---HhcC---CcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChHH
Confidence 5999999999999999999999999 7777 999999999999999999999999999999999999 78888 88
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHH
Q 027558 89 HVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQD 168 (222)
Q Consensus 89 ~~~~i~~yk~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 168 (222)
+++.+++||++|++||..+|++|+++||++|||.++++ ++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 102 ~~~~i~~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~e 180 (268)
T 3efz_A 102 FIQVIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQ 180 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHhcC--CCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCc---ccccc
Q 027558 169 IANAEL--APTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKP---EPKLI 217 (222)
Q Consensus 169 ~a~~~L--~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~---Ai~~~ 217 (222)
+|+++| |||||||||||||||||||||+|+|++||++||+|||+ ||++|
T Consensus 181 iA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde~~~AIael 234 (268)
T 3efz_A 181 RERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQAAENSRSDS 234 (268)
T ss_dssp HHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTCCC-
T ss_pred HHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHh
Confidence 999899 99999999999999999999999999999999999999 99987
No 8
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00 E-value=4.9e-79 Score=523.21 Aligned_cols=190 Identities=21% Similarity=0.256 Sum_probs=184.0
Q ss_pred ChHHHH---HHHHHHHHhCCHHHHHHHHHHHHh----ccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhh
Q 027558 11 PREENV---YMAKLAEQAERYEEMVEFMEKVSA----SVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEES 83 (222)
Q Consensus 11 ~r~~li---~~AklaeqaeRy~Dm~~~mk~~i~----~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~ 83 (222)
+|++++ |+|||+|||||||||+++||++++ .+ ++||.||||||||||||+||++|+|||+|+++||++
T Consensus 2 ~re~~v~~~~~AKlaeqaeRyddM~~~mk~v~~~~~~~~---~eLt~EERnLLSvAYKNvig~rR~swRiissiEqke-- 76 (227)
T 2o8p_A 2 EMDERLLQKYRAQVFEWGGCFDKMFEALKSLIYLSEFEN---SEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQ-- 76 (227)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccC---CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHH--
Confidence 589999 999999999999999999999999 78 899999999999999999999999999999999998
Q ss_pred cCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHH
Q 027558 84 RGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAY 163 (222)
Q Consensus 84 ~~~~~~~~~i~~yk~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY 163 (222)
+|++.+++.+++||++|++||..+|++|+++||++|||++ |++|||+|||||||||+|||..|+ +++|+++|
T Consensus 77 k~~~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a---EskVFY~KMKGDYyRYlAE~~~g~-----~e~a~~aY 148 (227)
T 2o8p_A 77 LNNDELVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSF---FSKFFKLKVKSDISRYKLEFGLCS-----LEDSKKIH 148 (227)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSH---HHHHHHHHHHHHHHHHHHHTTSSC-----HHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcH---HHHHHHHHHhhhHHHHHHHHcccc-----HHHHHHHH
Confidence 6788899999999999999999999999999999999998 999999999999999999999998 88999999
Q ss_pred HHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCcc
Q 027558 164 KAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKPE 213 (222)
Q Consensus 164 ~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~A 213 (222)
++|+++|+.+||||||+||||+||||||||||+|+|++||.+||+|||.+
T Consensus 149 ~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~ 198 (227)
T 2o8p_A 149 QDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKIL 198 (227)
T ss_dssp HHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 99999999899999999999999999999999999999999999999965
No 9
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=95.69 E-value=0.58 Score=36.85 Aligned_cols=154 Identities=17% Similarity=0.188 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChhhHHHH
Q 027558 14 ENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTI 93 (222)
Q Consensus 14 ~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i 93 (222)
-+..++.+....|+|++++.++.++++.. .............++.+ +-.+-.. .|+ ..+.
T Consensus 45 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~---~~~~~~~~~~~~~~~~~-----------l~~~~~~---~g~--~~~A- 104 (283)
T 3edt_B 45 MLNILALVYRDQNKYKEAAHLLNDALAIR---EKTLGKDHPAVAATLNN-----------LAVLYGK---RGK--YKEA- 104 (283)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHH---HHHTCTTCHHHHHHHHH-----------HHHHHHT---TTC--HHHH-
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHH---HHHcCCcchHHHHHHHH-----------HHHHHHH---hcc--HHHH-
Confidence 34577888888999999999999888652 11000000111112222 1111111 121 1112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHHHHhc
Q 027558 94 RDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAE 173 (222)
Q Consensus 94 ~~yk~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~ 173 (222)
...+...+.+.....-|. ....+..+...|..|..+-. .+.|...|++|+++.+..
T Consensus 105 -----------~~~~~~al~~~~~~~~~~---~~~~~~~~~~la~~~~~~g~----------~~~A~~~~~~al~~~~~~ 160 (283)
T 3edt_B 105 -----------EPLCKRALEIREKVLGKF---HPDVAKQLNNLALLCQNQGK----------AEEVEYYYRRALEIYATR 160 (283)
T ss_dssp -----------HHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHHTTTC----------HHHHHHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHHHHHcCCC---ChHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHHh
Confidence 222333333333332221 12334444555665543322 357899999999998888
Q ss_pred CCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 174 LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 174 L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
..+.+|.......|.+..|+. +|+.++|+...++++..
T Consensus 161 ~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 161 LGPDDPNVAKTKNNLASCYLK-QGKYQDAETLYKEILTR 198 (283)
T ss_dssp SCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 888899888888888888887 69999999999988764
No 10
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=95.66 E-value=0.66 Score=37.30 Aligned_cols=185 Identities=15% Similarity=0.146 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccC--C--CCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhh-hhh--cC
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVE--S--SEELTVEERNLLSVAYKNVIGARRASWRIISSIEQK-EES--RG 85 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~--~--~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk-~~~--~~ 85 (222)
+-+..++.+....|+|++++.+++++++... . +.+....-...+..+|-. .+....+...+...... ... ..
T Consensus 28 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 106 (311)
T 3nf1_A 28 RTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRD-QNKYKDAANLLNDALAIREKTLGKD 106 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 4566888999999999999999999987420 0 022222233344444422 23334444443321111 000 00
Q ss_pred ChhhHH----HHHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHH
Q 027558 86 NEDHVS----TIRDY-RSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTL 160 (222)
Q Consensus 86 ~~~~~~----~i~~y-k~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~ 160 (222)
.+.... ...-| ...--++-...+...+.+.....-+. .......+-..|..|...- + .+.|.
T Consensus 107 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~---~~~~~~~~~~la~~~~~~~-----~-----~~~A~ 173 (311)
T 3nf1_A 107 HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKD---HPDVAKQLNNLALLCQNQG-----K-----YEEVE 173 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHHTTT-----C-----HHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCC---ChHHHHHHHHHHHHHHHcC-----C-----HHHHH
Confidence 111110 00001 00111233334444444443322111 1223333444455443221 1 45789
Q ss_pred HHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 161 TAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 161 ~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
+.|++|+++......+.+|.......+.+..|+. .|+.++|+...+++.+.
T Consensus 174 ~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 224 (311)
T 3nf1_A 174 YYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQAETLYKEILTR 224 (311)
T ss_dssp HHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 9999999999877788889888888888888876 69999999999988764
No 11
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=95.59 E-value=0.52 Score=35.59 Aligned_cols=162 Identities=12% Similarity=0.067 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChhhHH-
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVS- 91 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~- 91 (222)
.-...++.+..+-|+|++++++++++++.+ |. +.+=...+..+|-. .+....+...+........ .......
T Consensus 6 ~iy~~lG~~~~~~g~~~~A~~~~~~al~~~---p~-~~~~~~~la~~~~~-~~~~~~a~~~~~~~~~~~~--~~~~~~~~ 78 (184)
T 3vtx_A 6 TIYMDIGDKKRTKGDFDGAIRAYKKVLKAD---PN-NVETLLKLGKTYMD-IGLPNDAIESLKKFVVLDT--TSAEAYYI 78 (184)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC---TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCC--CCHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CC-CHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCc--hhHHHHHH
Confidence 345678899999999999999999999886 54 34555566666544 3444445444433222211 1111000
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHHH
Q 027558 92 TIRDY-RSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIA 170 (222)
Q Consensus 92 ~i~~y-k~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 170 (222)
...-+ ...-.++-...+...+.+ -|.. . ..+...|..|.-+ |+ -++|.+.|++++++
T Consensus 79 ~~~~~~~~~~~~~a~~~~~~a~~~-----~~~~----~--~~~~~lg~~~~~~-----g~-----~~~A~~~~~~~l~~- 136 (184)
T 3vtx_A 79 LGSANFMIDEKQAAIDALQRAIAL-----NTVY----A--DAYYKLGLVYDSM-----GE-----HDKAIEAYEKTISI- 136 (184)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CTTC----H--HHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH-
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-----Cccc----h--HHHHHHHHHHHHh-----CC-----chhHHHHHHHHHHh-
Confidence 00000 000011112222222221 1221 1 1233345443222 11 35688889988864
Q ss_pred HhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 171 NAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 171 ~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
.|.+| ....|.+..|+. +|+.++|+..-++|++
T Consensus 137 ----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 137 ----KPGFI---RAYQSIGLAYEG-KGLRDEAVKYFKKALE 169 (184)
T ss_dssp ----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred ----cchhh---hHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 34554 445566666665 7999999999988865
No 12
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=94.52 E-value=1.7 Score=35.86 Aligned_cols=76 Identities=5% Similarity=-0.009 Sum_probs=51.4
Q ss_pred CchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHH
Q 027558 126 GDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNL 205 (222)
Q Consensus 126 ~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~i 205 (222)
....+..+...|..|...-+ -+.|...|++|+++++. .+....+...+..|.+..|+. +|+.++|+..
T Consensus 151 ~~~~~~~~~~lg~~y~~~~~----------~~~A~~~~~kal~~~~~-~~~~~~~~~~~~~nlg~~y~~-~~~y~~Al~~ 218 (293)
T 2qfc_A 151 VYQNLYIENAIANIYAENGY----------LKKGIDLFEQILKQLEA-LHDNEEFDVKVRYNHAKALYL-DSRYEESLYQ 218 (293)
T ss_dssp TTHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHh-cCccccchHHHHHhHHHHHHH-HhhHHHHHHH
Confidence 33345455666776654322 35689999999999863 432222233577788888776 7999999999
Q ss_pred HHHhcCcc
Q 027558 206 AKQVCKPE 213 (222)
Q Consensus 206 Ak~Afd~A 213 (222)
.++|.+-+
T Consensus 219 ~~kal~~~ 226 (293)
T 2qfc_A 219 VNKAIEIS 226 (293)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99887644
No 13
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=94.38 E-value=1.8 Score=35.66 Aligned_cols=72 Identities=4% Similarity=0.003 Sum_probs=54.5
Q ss_pred HHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHh
Q 027558 130 VFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQV 209 (222)
Q Consensus 130 vfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~A 209 (222)
+-.+...|..|..+-. -++|...|++|+++++ .++..+|....+..|.+..|++ +|+.++|+...++|
T Consensus 155 ~~~~~~lg~~y~~~g~----------~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~nlg~~y~~-~~~y~~A~~~~~~a 222 (293)
T 3u3w_A 155 LYIENAIANIYAENGY----------LKKGIDLFEQILKQLE-ALHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKA 222 (293)
T ss_dssp HHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHH-HSSCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHH-hcccchhHHHHHHHHHHHHHHH-HhHHHHHHHHHHHH
Confidence 3334555666543322 3678999999999886 4666777777788999999998 69999999999998
Q ss_pred cCcc
Q 027558 210 CKPE 213 (222)
Q Consensus 210 fd~A 213 (222)
++-+
T Consensus 223 l~~~ 226 (293)
T 3u3w_A 223 IEIS 226 (293)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 14
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=94.28 E-value=2 Score=35.82 Aligned_cols=190 Identities=13% Similarity=-0.013 Sum_probs=97.8
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCC---HHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCCh
Q 027558 11 PREENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELT---VEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNE 87 (222)
Q Consensus 11 ~r~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls---~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~ 87 (222)
.-..+..++..+.+.|+|++++.++.++++.. +.-. ..-...++.+|-. .+....+...+.....-....+..
T Consensus 8 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~---~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~ 83 (406)
T 3sf4_A 8 SCLELALEGERLCKSGDCRAGVSFFEAAVQVG---TEDLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQ 83 (406)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---CSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhcC---cccHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhcccc
Confidence 34567788999999999999999999999876 4321 1223344444432 334444444443211111111111
Q ss_pred hhHHHH-----HHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhh-------hcc---chh
Q 027558 88 DHVSTI-----RDY-RSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAE-------FKT---GAE 151 (222)
Q Consensus 88 ~~~~~i-----~~y-k~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE-------~~~---~~~ 151 (222)
.....+ .-| ...--++-...+...+.+.... .+.......+-..|..|...-. ... .++
T Consensus 84 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~ 158 (406)
T 3sf4_A 84 LGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEE 158 (406)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-----ccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhh
Confidence 110000 001 1111233344445555544332 1222233334444444443332 111 122
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 152 RKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 152 ~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
-....+.|...|++|++++.. . +.+|.......|.+..|+. +|+.++|+...++|+.-
T Consensus 159 a~~~~~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 216 (406)
T 3sf4_A 159 VRDALQAAVDFYEENLSLVTA-L-GDRAAQGRAFGNLGNTHYL-LGNFRDAVIAHEQRLLI 216 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHHHH-HTBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh-c-cCcHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHH
Confidence 334467888889999888764 3 2345544555566666665 69999999888887654
No 15
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=94.10 E-value=2.4 Score=35.91 Aligned_cols=188 Identities=15% Similarity=0.024 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCH---HHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChhh
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTV---EERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDH 89 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~---eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~ 89 (222)
..+..++....+.|+|++++.++.++++.. +.-.. .=...+..+|-. .+....+...+....+.....+....
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~---~~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~ 124 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQAG---TEDLRTLSAIYSQLGNAYFY-LGDYNKAMQYHKHDLTLAKSMNDRLG 124 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---CSCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHhc---ccChhHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHccCchH
Confidence 456678888899999999999999999876 44111 123344444432 34445555544322221111111110
Q ss_pred HHHHHH------HHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhh-------ccchhHHHHH
Q 027558 90 VSTIRD------YRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEF-------KTGAERKEAA 156 (222)
Q Consensus 90 ~~~i~~------yk~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~-------~~~~~~~~~~ 156 (222)
...+-. +...--++-...+...+.+.... .+.......+...|..|...-.. ...++-....
T Consensus 125 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~ 199 (411)
T 4a1s_A 125 EAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL-----GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEAL 199 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHH
Confidence 000000 11111233344445555544331 12223344444555555444330 0011223346
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
+.|...|++|++++... +.+|.......|.+..|+. .|+.++|+...++|++-
T Consensus 200 ~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 252 (411)
T 4a1s_A 200 TRAVEFYQENLKLMRDL--GDRGAQGRACGNLGNTYYL-LGDFQAAIEHHQERLRI 252 (411)
T ss_dssp HHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHHH
Confidence 78889999999888643 2334444455556665555 79999999988887654
No 16
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=93.68 E-value=0.25 Score=45.95 Aligned_cols=102 Identities=8% Similarity=-0.024 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcch
Q 027558 102 TELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIR 181 (222)
Q Consensus 102 ~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pir 181 (222)
+|-..+|...+.+-.+.|=|... ...=-+.--|..|+..-. -+.|...|++|+++-+..|+|.||--
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp---~~a~~~~nLa~~y~~~g~----------~~eA~~~~~~aL~i~~~~lG~~Hp~~ 392 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNL---YVLRLLSIASEVLSYLQA----------YEEASHYARRMVDGYMKLYHHNNAQL 392 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSH---HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCH---HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 45566777777777666644321 112112223333322211 25689999999999999999999999
Q ss_pred hhhhHHHHHHHHHHhCChHHHHHHHHHhcCcccccc
Q 027558 182 LGLALNFSVFYYEILNSPDRACNLAKQVCKPEPKLI 217 (222)
Q Consensus 182 LgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~Ai~~~ 217 (222)
+....|.++.|+. .|+.++|..+.++|++---.-+
T Consensus 393 a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~i~~~~l 427 (490)
T 3n71_A 393 GMAVMRAGLTNWH-AGHIEVGHGMICKAYAILLVTH 427 (490)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999887 6999999999999976443333
No 17
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=93.22 E-value=2.8 Score=33.84 Aligned_cols=173 Identities=7% Similarity=-0.068 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChhhHHH
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVST 92 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~ 92 (222)
.-+..++.+..+.|+|++++.++++.++.. +.-. .-...+..+|-. .+..-.+...+....+...... ......
T Consensus 126 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~---~~~~-~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~~~~~-~~~~~l 199 (330)
T 3hym_B 126 PAWIAYGHSFAVESEHDQAMAAYFTAAQLM---KGCH-LPMLYIGLEYGL-TNNSKLAERFFSQALSIAPEDP-FVMHEV 199 (330)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHT---TTCS-HHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCTTCH-HHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhc---cccH-HHHHHHHHHHHH-HhhHHHHHHHHHHHHHhCCCCh-HHHHHH
Confidence 345667777777777777777777777665 4322 223334444433 3334444444433222211000 000011
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 027558 93 IRD-YRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIAN 171 (222)
Q Consensus 93 i~~-yk~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~ 171 (222)
..- +...--++-....+..+.+....--+........+ +...|..|...- -.+.|...|++|+++.
T Consensus 200 ~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~--~~~la~~~~~~g----------~~~~A~~~~~~a~~~~- 266 (330)
T 3hym_B 200 GVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPL--LNNLGHVCRKLK----------KYAEALDYHRQALVLI- 266 (330)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHH--HHHHHHHHHHTT----------CHHHHHHHHHHHHHHS-
T ss_pred HHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHH--HHHHHHHHHHhc----------CHHHHHHHHHHHHhhC-
Confidence 111 11111233344444555543322111111111122 223344432221 1356888899988653
Q ss_pred hcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 172 AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 172 ~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
|.+| ....+.+..++. +|+.++|....+++++.
T Consensus 267 ----~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 299 (330)
T 3hym_B 267 ----PQNA---STYSAIGYIHSL-MGNFENAVDYFHTALGL 299 (330)
T ss_dssp ----TTCS---HHHHHHHHHHHH-HTCHHHHHHHHHTTTTT
T ss_pred ----ccch---HHHHHHHHHHHH-hccHHHHHHHHHHHHcc
Confidence 3343 344555666665 79999999998887653
No 18
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=93.10 E-value=0.23 Score=45.15 Aligned_cols=56 Identities=11% Similarity=-0.004 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCcc
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKPE 213 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~A 213 (222)
+.|...|++|+++-+..++|.||.......|.++.|.. .|+.++|..+.++|++--
T Consensus 346 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~-~g~~~eA~~~~~~Al~i~ 401 (429)
T 3qwp_A 346 EEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH-QGMFPQAMKNLRLAFDIM 401 (429)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHH
Confidence 57899999999999989999999999999999999887 699999999999987643
No 19
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=92.99 E-value=2.1 Score=33.33 Aligned_cols=59 Identities=12% Similarity=-0.022 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHH
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIIS 75 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~ 75 (222)
+.+..++....+.|+|++++.++.++++.+ +.-+..-...+..+|-. .+....+...+.
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~---~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~ 66 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLT---NNQDSVTAYNCGVCADN-IKKYKEAADYFD 66 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHT---TTCCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcc---CCCCcHHHHHHHHHHHH-hhcHHHHHHHHH
Confidence 678889999999999999999999999886 53444444445555543 455556655554
No 20
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=92.69 E-value=3 Score=32.90 Aligned_cols=53 Identities=9% Similarity=-0.013 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 158 STLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 158 ~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
.|...|++|+++....-.+.++.......+.+.+|+. .|+.++|+...++++.
T Consensus 197 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~ 249 (272)
T 3u4t_A 197 LAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTI-NRDKVKADAAWKNILA 249 (272)
T ss_dssp TTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 4788899999988643322222223444555655554 7999999999988864
No 21
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=92.48 E-value=0.49 Score=43.24 Aligned_cols=99 Identities=12% Similarity=0.040 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcch
Q 027558 102 TELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIR 181 (222)
Q Consensus 102 ~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pir 181 (222)
+|...+|...+.+-.+.|=|... ...=-+.--|.-|+.+- --+.|...|++|+++-+..++|.||--
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp---~~a~~~~nLa~~y~~~g----------~~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNV---YMLHMMYQAMGVCLYMQ----------DWEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSH---HHHHHHHHHHHHHHHTT----------CHHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHHHHHHHHhhCccChhch---HHHHHHHHHHHHHHhhc----------CHHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 45566777777777666644431 11111222222222211 135789999999999999999999999
Q ss_pred hhhhHHHHHHHHHHhCChHHHHHHHHHhcCccc
Q 027558 182 LGLALNFSVFYYEILNSPDRACNLAKQVCKPEP 214 (222)
Q Consensus 182 LgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~Ai 214 (222)
.....|.++-|+. .|+.++|..+-++|++--.
T Consensus 382 a~~l~nLa~~~~~-qg~~~eA~~~~~~Al~i~~ 413 (433)
T 3qww_A 382 ASMWLKLGRLYMG-LENKAAGEKALKKAIAIME 413 (433)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHHH
Confidence 9999999999887 6999999999999876443
No 22
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=92.46 E-value=4.6 Score=34.44 Aligned_cols=178 Identities=8% Similarity=-0.012 Sum_probs=92.3
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHH-----HHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChhh
Q 027558 15 NVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEE-----RNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDH 89 (222)
Q Consensus 15 li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eE-----RnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~ 89 (222)
+..++++..+.|+|++++++++++.... +.++... ++++...+. ..+..-.+..............++...
T Consensus 58 l~~l~~~y~~~~~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~ 133 (434)
T 4b4t_Q 58 ILELGQLYVTMGAKDKLREFIPHSTEYM---MQFAKSKTVKVLKTLIEKFEQ-VPDSLDDQIFVCEKSIEFAKREKRVFL 133 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTHHHH---HTSCHHHHHHHHHHHHHHHCS-CCSCHHHHHHHHHHHHHHHHHSSCCSS
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHH---HHccchHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHhCccHH
Confidence 6789999999999999999999998765 5555432 222222221 112222222222111111111111111
Q ss_pred HHHHHHHHHHHH------HHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHH
Q 027558 90 VSTIRDYRSKIE------TELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAY 163 (222)
Q Consensus 90 ~~~i~~yk~kie------~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY 163 (222)
...+....-++- .+...+.++++... +...+....+-++-..|..|.-+- + .++|...|
T Consensus 134 ~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~A~~~~ 198 (434)
T 4b4t_Q 134 KHSLSIKLATLHYQKKQYKDSLALINDLLREF-----KKLDDKPSLVDVHLLESKVYHKLR-----N-----LAKSKASL 198 (434)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-----TTSSCSTHHHHHHHHHHHHHHHTT-----C-----HHHHHHHH
T ss_pred HHHHHHHHHHHHHHccChHHHHHHHHHHHHHH-----HhcccchhHHHHHHHHHHHHHHhC-----c-----HHHHHHHH
Confidence 111111111221 12222222322222 222233445545555555443221 1 35789999
Q ss_pred HHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCcc
Q 027558 164 KAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKPE 213 (222)
Q Consensus 164 ~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~A 213 (222)
++|..++.. .+ ..|.-.|...+.+.-+|...++.++|+..-.++|+..
T Consensus 199 ~~al~~~~~-~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~ 246 (434)
T 4b4t_Q 199 TAARTAANS-IY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESY 246 (434)
T ss_dssp HHHHHHHHH-SC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhc-CC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 999998853 43 2334446666666667777899999999988887643
No 23
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=92.43 E-value=0.65 Score=36.54 Aligned_cols=56 Identities=13% Similarity=0.068 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCcc
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKPE 213 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~A 213 (222)
+.|...|++|+++.+....|.+|.......|.+..|+. +|+.++|....+++++..
T Consensus 102 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 157 (283)
T 3edt_B 102 KEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQN-QGKAEEVEYYYRRALEIY 157 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 57899999999999888888899999989999888886 699999999999988753
No 24
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=92.04 E-value=3.8 Score=32.61 Aligned_cols=188 Identities=12% Similarity=-0.021 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHH----HHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChh
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVE----ERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNED 88 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~e----ERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 88 (222)
..+...+....+.|+|++++.++++.++.. +. +.+ =...+..+|-. .+....+...+....+.....+...
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~---~~-~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 80 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQVG---TE-DLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQL 80 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---CS-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhC---cc-cHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHhhcccccH
Confidence 467778899999999999999999999875 43 222 22233444332 2334444444432211111111111
Q ss_pred hHHHH-----HH-HHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhc----------cchhH
Q 027558 89 HVSTI-----RD-YRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFK----------TGAER 152 (222)
Q Consensus 89 ~~~~i-----~~-yk~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~----------~~~~~ 152 (222)
....+ .- +...--++-...+...+.+... ..+.......+...|..|...-... ..++-
T Consensus 81 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a 155 (338)
T 3ro2_A 81 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRE-----LNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDV 155 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH-----hcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhH
Confidence 11000 00 1111123334444455554433 2233344445566677666554411 01122
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCcc
Q 027558 153 KEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKPE 213 (222)
Q Consensus 153 ~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~A 213 (222)
....+.|...|++|+.++... +.+|.......+.+..++. .|+.++|....+++++-+
T Consensus 156 ~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~ 213 (338)
T 3ro2_A 156 RNALQAAVDLYEENLSLVTAL--GDRAAQGRAFGNLGNTHYL-LGNFRDAVIAHEQRLLIA 213 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHH
Confidence 334678888888888887642 2334444445555555554 799999999888876543
No 25
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=91.96 E-value=3.3 Score=34.25 Aligned_cols=59 Identities=14% Similarity=0.177 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHh
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISS 76 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 76 (222)
.-+..++.+....|+|++++.+++++++.+ +. +.+-...+..+|-. .+....+...+..
T Consensus 99 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~---~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~ 157 (368)
T 1fch_A 99 EAWQYLGTTQAENEQELLAISALRRCLELK---PD-NQTALMALAVSFTN-ESLQRQACEILRD 157 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHhcC---CC-CHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 455677888888888888888888888775 43 34445555555543 3444455555543
No 26
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=91.93 E-value=5.2 Score=33.91 Aligned_cols=174 Identities=11% Similarity=0.023 Sum_probs=89.8
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCH-----HHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCC-hhhHH
Q 027558 18 MAKLAEQAERYEEMVEFMEKVSASVESSEELTV-----EERNLLSVAYKNVIGARRASWRIISSIEQKEESRGN-EDHVS 91 (222)
Q Consensus 18 ~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~-----eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~-~~~~~ 91 (222)
++......|+|++++.++++.++.. ..... +=...++.+|-. .+..-.|...+....+-.+..++ .....
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~---~~~~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~ 184 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKL---IFVKDRIEKAEFFFKMSESYYY-MKQTYFSMDYARQAYEIYKEHEAYNIRLL 184 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTG---GGCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTCSTTHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHH---hhCCCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHhCccchHHHH
Confidence 7888889999999999999998763 22222 223344444433 33333343333211111111111 10100
Q ss_pred HHHH-----H-HHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHH
Q 027558 92 TIRD-----Y-RSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKA 165 (222)
Q Consensus 92 ~i~~-----y-k~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~ 165 (222)
.+-. | ...--++-....+..+++..+. .+.......+.-.|..|..+-. -+.|...|++
T Consensus 185 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~lg~~y~~~g~----------~~~A~~~~~~ 249 (383)
T 3ulq_A 185 QCHSLFATNFLDLKQYEDAISHFQKAYSMAEAE-----KQPQLMGRTLYNIGLCKNSQSQ----------YEDAIPYFKR 249 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc-----CChHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHH
Confidence 0000 0 0011122333344444443321 2222333334445555533321 4578999999
Q ss_pred HHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCcc
Q 027558 166 AQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKPE 213 (222)
Q Consensus 166 A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~A 213 (222)
|+++++..-. .|.......|.+..|+. +|+.++|....++|+.-+
T Consensus 250 al~~~~~~~~--~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~ 294 (383)
T 3ulq_A 250 AIAVFEESNI--LPSLPQAYFLITQIHYK-LGKIDKAHEYHSKGMAYS 294 (383)
T ss_dssp HHHHHHHTTC--GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcc--chhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHH
Confidence 9999875322 14444556666777666 799999999998887543
No 27
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=91.36 E-value=0.26 Score=45.12 Aligned_cols=60 Identities=12% Similarity=0.100 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCcccccc
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKPEPKLI 217 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~Ai~~~ 217 (222)
+.|...|++|+++.+..|.|.||-.+...-|.+.-|.. +|+.++|..+.++|++---+.+
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~l 374 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKPYSKHY 374 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHHc
Confidence 56788999999999889999999999999999888877 7999999999999876543333
No 28
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=90.94 E-value=0.3 Score=45.41 Aligned_cols=62 Identities=16% Similarity=0.076 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCccccccCC
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKPEPKLIVP 219 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~Ai~~~~~ 219 (222)
+.|...|++|+++.+..|.|.||-.+...-|.+..|.. .|+.++|..+.++|++---+.+-|
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~lG~ 387 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVDGYMKLYHH 387 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHcCC
Confidence 46788899999999889999999999999999988887 699999999999987655444433
No 29
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=90.66 E-value=7.6 Score=33.46 Aligned_cols=56 Identities=13% Similarity=0.055 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHhcC--CCCC----cchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 156 AESTLTAYKAAQDIANAEL--APTH----PIRLGLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L--~pt~----pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
.+.|...|+++++.-...+ .|.+ |-......+.+..++. .|+.++|+...+++++.
T Consensus 205 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~l~~ 266 (514)
T 2gw1_A 205 YDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL-KNDPLGAHEDIKKAIEL 266 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH-SSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhh
Confidence 4677888888887443334 4554 5566666667777665 69999999998887653
No 30
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=90.60 E-value=7.7 Score=33.41 Aligned_cols=49 Identities=14% Similarity=0.066 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhc
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVC 210 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Af 210 (222)
++|.+.|++|+++ .|.++..-.+.+++..|.+.-+|+.++|+..-++|+
T Consensus 351 ~~A~~~~~kaL~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal 399 (472)
T 4g1t_A 351 EEAEYYFQKEFSK-----ELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGV 399 (472)
T ss_dssp HHHHHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 5689999999853 344455555677888887777899999998877765
No 31
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=90.56 E-value=8.9 Score=34.09 Aligned_cols=47 Identities=9% Similarity=0.130 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 156 AESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
.+.|.+.|++++++ .|.+| ....+.+..|. -.|+.++|....+++++
T Consensus 532 ~~~A~~~~~~~~~~-----~p~~~---~~~~~l~~~~~-~~g~~~~A~~~~~~~l~ 578 (597)
T 2xpi_A 532 YDAAIDALNQGLLL-----STNDA---NVHTAIALVYL-HKKIPGLAITHLHESLA 578 (597)
T ss_dssp HHHHHHHHHHHHHH-----SSCCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHH-HhCCHHHHHHHHHHHHh
Confidence 45678888888765 35554 33444444444 47999999999988865
No 32
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=90.25 E-value=0.76 Score=39.39 Aligned_cols=74 Identities=14% Similarity=0.112 Sum_probs=51.4
Q ss_pred chHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHH
Q 027558 127 DSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLA 206 (222)
Q Consensus 127 eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iA 206 (222)
....+|+-.+|.++...-. -+.|...|++|++++.. ++ .+|..-....|.+.+|+. +|++++|+...
T Consensus 98 ~l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~~-~~~~~a~~~~~lg~~y~~-~~~~~~A~~~~ 164 (378)
T 3q15_A 98 LLKYYSLFFRGMYEFDQKE----------YVEAIGYYREAEKELPF-VS-DDIEKAEFHFKVAEAYYH-MKQTHVSMYHI 164 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-CC-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCC----------HHHHHHHHHHHHHHHhh-CC-ChHHHHHHHHHHHHHHHH-cCCcHHHHHHH
Confidence 3455667778887654432 35689999999988753 32 335555556666777776 79999999999
Q ss_pred HHhcCcc
Q 027558 207 KQVCKPE 213 (222)
Q Consensus 207 k~Afd~A 213 (222)
++|.+-.
T Consensus 165 ~~al~~~ 171 (378)
T 3q15_A 165 LQALDIY 171 (378)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887643
No 33
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=89.91 E-value=1.7 Score=37.05 Aligned_cols=73 Identities=15% Similarity=0.149 Sum_probs=49.1
Q ss_pred hHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHH
Q 027558 128 SKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAK 207 (222)
Q Consensus 128 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk 207 (222)
...+|+-.+|.+|...-. -+.|...|++|++++.. . +.+|..-....+.+..|+. +|+.++|+...+
T Consensus 101 l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~-~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~ 167 (383)
T 3ulq_A 101 LEYYFNFFRGMYELDQRE----------YLSAIKFFKKAESKLIF-V-KDRIEKAEFFFKMSESYYY-MKQTYFSMDYAR 167 (383)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-C-CCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHhh-C-CCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 345666777877644322 35689999999988753 3 2333344444555666665 799999999999
Q ss_pred HhcCcc
Q 027558 208 QVCKPE 213 (222)
Q Consensus 208 ~Afd~A 213 (222)
+|.+-+
T Consensus 168 ~al~~~ 173 (383)
T 3ulq_A 168 QAYEIY 173 (383)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887643
No 34
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=89.88 E-value=6.8 Score=31.68 Aligned_cols=48 Identities=8% Similarity=0.001 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 156 AESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
.+.|...|++++++ .|.+| ....+.+..++. .|+.++|+...++|++-
T Consensus 288 ~~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~-~g~~~~A~~~~~~a~~~ 335 (359)
T 3ieg_A 288 PVEAIRICSEVLQM-----EPDNV---NALKDRAEAYLI-EEMYDEAIQDYEAAQEH 335 (359)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHhc
Confidence 35678888888764 34443 455666666665 79999999999988764
No 35
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=89.44 E-value=8.2 Score=31.99 Aligned_cols=177 Identities=11% Similarity=0.026 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCC-----HHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChh
Q 027558 14 ENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELT-----VEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNED 88 (222)
Q Consensus 14 ~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls-----~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 88 (222)
-+..++.+....|+|++++.++++.++.. .... ..-...+..+|. ..+....+...+..........+...
T Consensus 49 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~---~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~ 124 (406)
T 3sf4_A 49 IYSQLGNAYFYLHDYAKALEYHHHDLTLA---RTIGDQLGEAKASGNLGNTLK-VLGNFDEAIVCCQRHLDISRELNDKV 124 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHH---HHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHH---HhccccHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhccccc
Confidence 35578888899999999999999987653 2111 112223333332 23444455554432222111111111
Q ss_pred hHH-----HHHHHHH-HH--------------------HHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccc
Q 027558 89 HVS-----TIRDYRS-KI--------------------ETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRY 142 (222)
Q Consensus 89 ~~~-----~i~~yk~-ki--------------------e~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRY 142 (222)
... +..-|.. .- -++-...+...+.+.... .+.......+...|..|..
T Consensus 125 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~la~~~~~ 199 (406)
T 3sf4_A 125 GEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTAL-----GDRAAQGRAFGNLGNTHYL 199 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhc-----cCcHHHHHHHHHHHHHHHH
Confidence 111 0011111 11 234444455555554432 1222333334444555443
Q ss_pred hhhhccchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 143 LAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 143 laE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
.-. .+.|...|++|++++.. . +.++.......|.+..|+. +|+.++|+...++|++-
T Consensus 200 ~g~----------~~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 256 (406)
T 3sf4_A 200 LGN----------FRDAVIAHEQRLLIAKE-F-GDKAAERRAYSNLGNAYIF-LGEFETASEYYKKTLLL 256 (406)
T ss_dssp HTB----------HHHHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred ccC----------HHHHHHHHHHHHHHHHh-c-CCcHHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHHH
Confidence 321 35688889999988764 2 2223333344455555554 79999999888887653
No 36
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=89.11 E-value=12 Score=33.46 Aligned_cols=173 Identities=16% Similarity=0.089 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHhCCH-HHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChhhHH
Q 027558 13 EENVYMAKLAEQAERY-EEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVS 91 (222)
Q Consensus 13 ~~li~~AklaeqaeRy-~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~ 91 (222)
+-+..++++....|+| ++++.++++.++.+ +. +.+-...+..+|-. .+....|...+....+.... ......
T Consensus 103 ~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~---p~-~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~--~~~~~~ 175 (474)
T 4abn_A 103 QALMLKGKALNVTPDYSPEAEVLLSKAVKLE---PE-LVEAWNQLGEVYWK-KGDVTSAHTCFSGALTHCKN--KVSLQN 175 (474)
T ss_dssp HHHHHHHHHHTSSSSCCHHHHHHHHHHHHHC---TT-CHHHHHHHHHHHHH-HTCHHHHHHHHHHHHTTCCC--HHHHHH
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHhhC---CC-CHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCC--HHHHHH
Confidence 4456667777777777 77777777777665 33 34455555555543 23444444444322111110 000111
Q ss_pred HHHHHHH----------HHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHH
Q 027558 92 TIRDYRS----------KIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLT 161 (222)
Q Consensus 92 ~i~~yk~----------kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~ 161 (222)
+-.-|.. .=-++-...++..+.+ -|.. . ..+-..|..|..+. +..+.. ..-.+.|..
T Consensus 176 lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~~----~--~~~~~lg~~~~~~~-~~~~~~-~g~~~~A~~ 242 (474)
T 4abn_A 176 LSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM-----DVLD----G--RSWYILGNAYLSLY-FNTGQN-PKISQQALS 242 (474)
T ss_dssp HHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH-----CTTC----H--HHHHHHHHHHHHHH-HHTTCC-HHHHHHHHH
T ss_pred HHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh-----CCCC----H--HHHHHHHHHHHHHH-Hhhccc-cchHHHHHH
Confidence 1011110 1123334444444443 1321 1 22334455544331 112221 123578899
Q ss_pred HHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 162 AYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 162 aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
+|++|+++ .|.+|-......|.+..|+. +|+.++|+...++|..
T Consensus 243 ~~~~al~~-----~p~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 286 (474)
T 4abn_A 243 AYAQAEKV-----DRKASSNPDLHLNRATLHKY-EESYGEALEGFSQAAA 286 (474)
T ss_dssp HHHHHHHH-----CGGGGGCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHh-----CCCcccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 99999876 23222556677788888776 6999999998888764
No 37
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=89.02 E-value=6.4 Score=30.17 Aligned_cols=163 Identities=12% Similarity=0.063 Sum_probs=82.9
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChh-hH
Q 027558 12 REENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNED-HV 90 (222)
Q Consensus 12 r~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~-~~ 90 (222)
-.-+..+|.+..+.|+|++++.+++++++.. +. +.+-...+..+|-. .+....+...+....+... .+.. ..
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~---~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~--~~~~~~~ 129 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALELD---SS-AATAYYGAGNVYVV-KEMYKEAKDMFEKALRAGM--ENGDLFY 129 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHTC--CSHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC---Cc-chHHHHHHHHHHHH-hccHHHHHHHHHHHHHhCC--CCHHHHH
Confidence 3456678888888999999999999988775 43 33444445555443 3444555555543322211 1111 11
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHH
Q 027558 91 STIRDY-RSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDI 169 (222)
Q Consensus 91 ~~i~~y-k~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~ 169 (222)
....-| +..--++-...++.++.+ -|. ... .+-..|..|.-. |+ .+.|...|+++++.
T Consensus 130 ~~a~~~~~~~~~~~A~~~~~~~~~~-----~~~----~~~--~~~~l~~~~~~~-----~~-----~~~A~~~~~~~~~~ 188 (243)
T 2q7f_A 130 MLGTVLVKLEQPKLALPYLQRAVEL-----NEN----DTE--ARFQFGMCLANE-----GM-----LDEALSQFAAVTEQ 188 (243)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHHH-----CTT----CHH--HHHHHHHHHHHH-----TC-----CHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHh-----CCc----cHH--HHHHHHHHHHHc-----CC-----HHHHHHHHHHHHHh
Confidence 111111 111112223333333332 121 111 222333333211 11 24577788887754
Q ss_pred HHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 170 ANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 170 a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
.|.+| ....+.+..|+. .|+.++|....+++++
T Consensus 189 -----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 221 (243)
T 2q7f_A 189 -----DPGHA---DAFYNAGVTYAY-KENREKALEMLDKAID 221 (243)
T ss_dssp -----CTTCH---HHHHHHHHHHHH-TTCTTHHHHHHHHHHH
T ss_pred -----CcccH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHc
Confidence 33333 345566666655 7999999999888865
No 38
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=88.70 E-value=10 Score=32.19 Aligned_cols=47 Identities=11% Similarity=0.063 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 156 AESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
.+.|...|++|+++ .|.+| ....+.+..+. ..|+.++|+...++++.
T Consensus 311 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~~~~~~A~~~~~~al~ 357 (450)
T 2y4t_A 311 PVEAIRVCSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYETAQE 357 (450)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 35678888888754 34444 44455555555 47999999999998876
No 39
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=88.64 E-value=7.5 Score=30.48 Aligned_cols=44 Identities=18% Similarity=0.249 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHh
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQV 209 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~A 209 (222)
+.|...|++|+++ .|.+| .+..|.+..+.. +|+.++|+...+++
T Consensus 168 ~~A~~~~~~al~~-----~P~~~---~~~~~la~~~~~-~g~~~~A~~~~~~~ 211 (217)
T 2pl2_A 168 DEALAQYAKALEQ-----APKDL---DLRVRYASALLL-KGKAEEAARAAALE 211 (217)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHTC---------------
T ss_pred HHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHH-ccCHHHHHHHHHHH
Confidence 3455666666542 33443 334455554443 46666666655443
No 40
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=88.58 E-value=6 Score=31.08 Aligned_cols=30 Identities=20% Similarity=0.313 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
+.++.+|...-+.|+|++++.+++++++.+
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~ 33 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEAKK 33 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 467889999999999999999999999876
No 41
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=88.24 E-value=8.4 Score=30.56 Aligned_cols=53 Identities=15% Similarity=-0.053 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
+.|...|++|++++... .+|...+.+++.-...|.-.|++++|....+++++-
T Consensus 200 ~~A~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 252 (338)
T 3ro2_A 200 RDAVIAHEQRLLIAKEF---GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLL 252 (338)
T ss_dssp HHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 56788888888887642 233334434433333444479999998888887654
No 42
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=88.23 E-value=12 Score=32.49 Aligned_cols=48 Identities=10% Similarity=0.174 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 156 AESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
.+.|...|++|+++ .|.+| ....+.+..|+. +|+.++|+...+++.+-
T Consensus 444 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 491 (537)
T 3fp2_A 444 FNAAIKLLTKACEL-----DPRSE---QAKIGLAQLKLQ-MEKIDEAIELFEDSAIL 491 (537)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 45678888888764 44554 445666666665 79999999998887653
No 43
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=88.22 E-value=5.1 Score=28.07 Aligned_cols=55 Identities=16% Similarity=0.083 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCcc
Q 027558 156 AESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKPE 213 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~A 213 (222)
-+.|...|++|++++.. .. .+|.......+.+..++. .|+.++|+...++|.+-+
T Consensus 105 ~~~A~~~~~~a~~~~~~-~~-~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 105 YEKAIDYHLKHLAIAQE-LK-DRIGEGRACWSLGNAYTA-LGNHDQAMHFAEKHLEIS 159 (164)
T ss_dssp HHHHHHHHHHHHHHHHH-TT-CHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-cc-chHhHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHH
Confidence 35688999999998864 22 233444455566666655 799999999998887543
No 44
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=87.26 E-value=7.5 Score=32.27 Aligned_cols=173 Identities=10% Similarity=0.004 Sum_probs=76.8
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhccCCCCCC-CHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChhhHHHHHHH
Q 027558 18 MAKLAEQAERYEEMVEFMEKVSASVESSEEL-TVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDY 96 (222)
Q Consensus 18 ~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~L-s~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~y 96 (222)
++.+....|+|++++.++++.++.+ +.. +.+-...+..+|-. .+....+...+....+..... ......+..-|
T Consensus 183 l~~~~~~~g~~~~A~~~~~~al~~~---p~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~ 257 (365)
T 4eqf_A 183 MSKSPVDSSVLEGVKELYLEAAHQN---GDMIDPDLQTGLGVLFHL-SGEFNRAIDAFNAALTVRPED-YSLWNRLGATL 257 (365)
T ss_dssp ------CCHHHHHHHHHHHHHHHHS---CSSCCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHhC---cCccCHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHH
Confidence 4566666788888888888888765 442 45555555555533 344445555443322221100 00011111111
Q ss_pred H-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHHHHhcCC
Q 027558 97 R-SKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELA 175 (222)
Q Consensus 97 k-~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~ 175 (222)
. ..=-++-...++..+.+ -|.. ..+ +...|..|.-+ |+ .+.|...|++|+++......
T Consensus 258 ~~~g~~~~A~~~~~~al~~-----~p~~----~~~--~~~l~~~~~~~-----g~-----~~~A~~~~~~al~~~~~~~~ 316 (365)
T 4eqf_A 258 ANGDRSEEAVEAYTRALEI-----QPGF----IRS--RYNLGISCINL-----GA-----YREAVSNFLTALSLQRKSRN 316 (365)
T ss_dssp HHTTCHHHHHHHHHHHHHH-----CTTC----HHH--HHHHHHHHHHH-----TC-----CHHHHHHHHHHHHHHHCC--
T ss_pred HHcCCHHHHHHHHHHHHhc-----CCCc----hHH--HHHHHHHHHHC-----CC-----HHHHHHHHHHHHHhCcccCC
Confidence 1 11112233333333332 1221 122 22334433222 11 35689999999999865544
Q ss_pred CCCc---chhhhhHHHHHHHHHHhCChHHHHHHHHHhcCccccc
Q 027558 176 PTHP---IRLGLALNFSVFYYEILNSPDRACNLAKQVCKPEPKL 216 (222)
Q Consensus 176 pt~p---irLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~Ai~~ 216 (222)
|.+| ...+-+++.-...+..+|.++.|-...+.+.+..-+.
T Consensus 317 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~a~~~~~~~l~~~~~~ 360 (365)
T 4eqf_A 317 QQQVPHPAISGNIWAALRIALSLMDQPELFQAANLGDLDVLLRA 360 (365)
T ss_dssp ----------CHHHHHHHHHHHHHTCHHHHHHHHTTCCGGGTTT
T ss_pred CcccchhhhHHHHHHHHHHHHHHcCcHHHHHHHHHhhHHHHHHh
Confidence 4333 3234444444445566899988877766655444333
No 45
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=87.16 E-value=0.41 Score=43.49 Aligned_cols=56 Identities=14% Similarity=0.045 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCcc
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKPE 213 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~A 213 (222)
+.|...|++++++.+..|.|.||..+...-|.+.-|.. +|+.++|..+.+++++--
T Consensus 304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i~ 359 (429)
T 3qwp_A 304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEPY 359 (429)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhH
Confidence 45677788888777778999999999999999888776 799999999999987644
No 46
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=87.04 E-value=14 Score=31.78 Aligned_cols=173 Identities=9% Similarity=-0.073 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChhhHHH
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVST 92 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~ 92 (222)
+-+..++.+..+.|+|++++.+++++++.. +.- .+-...+..+|- ..+....+...+....+...... ......
T Consensus 305 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~---~~~-~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~-~~~~~l 378 (514)
T 2gw1_A 305 SVYYHRGQMNFILQNYDQAGKDFDKAKELD---PEN-IFPYIQLACLAY-RENKFDDCETLFSEAKRKFPEAP-EVPNFF 378 (514)
T ss_dssp HHHHHHHHHHHHTTCTTHHHHHHHHHHHTC---SSC-SHHHHHHHHHTT-TTTCHHHHHHHHHHHHHHSTTCS-HHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhC---hhh-HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHcccCH-HHHHHH
Confidence 445677888888888888888888888775 442 233333444432 23444555555543332211111 111111
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 027558 93 IRDY-RSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIAN 171 (222)
Q Consensus 93 i~~y-k~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~ 171 (222)
..-| +..-.++-......++.+- |........+..+-..|..|.... ..| -.+.|...|++|+++
T Consensus 379 a~~~~~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~--~~~-----~~~~A~~~~~~a~~~-- 444 (514)
T 2gw1_A 379 AEILTDKNDFDKALKQYDLAIELE-----NKLDGIYVGIAPLVGKATLLTRNP--TVE-----NFIEATNLLEKASKL-- 444 (514)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHH-----HTSSSCSSCSHHHHHHHHHHHTSC--CTT-----HHHHHHHHHHHHHHH--
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhh-----hccchHHHHHHHHHHHHHHHhhhh--hcC-----CHHHHHHHHHHHHHh--
Confidence 1111 1111122333333333322 221111111112222333322100 011 145688888888764
Q ss_pred hcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 172 AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 172 ~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
.|.+| ....+.+..|.. .|+.++|....+++.+-
T Consensus 445 ---~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~a~~~ 478 (514)
T 2gw1_A 445 ---DPRSE---QAKIGLAQMKLQ-QEDIDEAITLFEESADL 478 (514)
T ss_dssp ---CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred ---CcccH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHHh
Confidence 34443 344555555554 79999999998887653
No 47
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=87.04 E-value=1.3 Score=32.11 Aligned_cols=47 Identities=15% Similarity=0.262 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 156 AESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
-+.|.+.|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+.
T Consensus 24 ~~~A~~~y~~Al~~-----~p~~~---~~~~nlg~~~~~-~~~~~~A~~~~~~al~ 70 (127)
T 4gcn_A 24 FEKAHVHYDKAIEL-----DPSNI---TFYNNKAAVYFE-EKKFAECVQFCEKAVE 70 (127)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHhHHHHHHH-hhhHHHHHHHHHHHHH
Confidence 36789999999865 45554 455678888887 7999999999888864
No 48
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=86.96 E-value=10 Score=30.13 Aligned_cols=186 Identities=13% Similarity=0.080 Sum_probs=95.9
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCC--hh
Q 027558 11 PREENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGN--ED 88 (222)
Q Consensus 11 ~r~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~--~~ 88 (222)
.-+.+..+|...-+.|+|++++..+.++++.. ++.++..+=...+..+|-. .+....+...+....+....... ..
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~~~p~~~~~~~a 91 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFTYG-RTHEWAADAQFYLARAYYQ-NKEYLLAASEYERFIQIYQIDPRVPQA 91 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGC-SCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCTTHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-CCCcchHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHCCCCchhHHH
Confidence 45778889999999999999999999999875 1123335666666666644 46666777777654443221111 11
Q ss_pred hHHHHHHH-H--------HHHHHHHHHHHHHHHHHhhhccCCCCCCC-chHHHHHHhhhcc---ccchhhhccchhHHHH
Q 027558 89 HVSTIRDY-R--------SKIETELSSICDGILKLLDSRLIPCASSG-DSKVFYLKMKGDY---HRYLAEFKTGAERKEA 155 (222)
Q Consensus 89 ~~~~i~~y-k--------~kie~EL~~~C~eil~lId~~Lip~~~~~-eskvfy~KmkgDy---yRYlaE~~~~~~~~~~ 155 (222)
...+..-| . ..--++-....+.++.+ -|..... ........+.+++ +-.++.+.... .-
T Consensus 92 ~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~-----~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~---g~ 163 (261)
T 3qky_A 92 EYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDR-----YPNHELVDDATQKIRELRAKLARKQYEAARLYERR---EL 163 (261)
T ss_dssp HHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHH-----CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred HHHHHHHHHHhcccccccchhHHHHHHHHHHHHHH-----CcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---cC
Confidence 11111112 2 22233444444444432 1432211 1111111111110 01111111000 01
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHH---------hCChHHHHHHHHHhcC
Q 027558 156 AESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEI---------LNSPDRACNLAKQVCK 211 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi---------~~~~~~A~~iAk~Afd 211 (222)
-+.|...|+++++ ..|.+|......++.+..|+.. .|+.++|+..-+++..
T Consensus 164 ~~~A~~~~~~~l~-----~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~ 223 (261)
T 3qky_A 164 YEAAAVTYEAVFD-----AYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQ 223 (261)
T ss_dssp HHHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----HCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHH
Confidence 3567888888775 3466676555566666666543 2777888887777653
No 49
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=86.28 E-value=10 Score=29.43 Aligned_cols=57 Identities=9% Similarity=-0.031 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHH
Q 027558 14 ENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIIS 75 (222)
Q Consensus 14 ~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~ 75 (222)
-+..+|.+..+.|+|++++.+++++++.+ +. +.+-...+..+|-. .+..-.+...+.
T Consensus 39 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~---~~-~~~~~~~la~~~~~-~~~~~~A~~~~~ 95 (252)
T 2ho1_A 39 AYIQLGLGYLQRGNTEQAKVPLRKALEID---PS-SADAHAALAVVFQT-EMEPKLADEEYR 95 (252)
T ss_dssp HHHHHHHHHHHTTCTGGGHHHHHHHHHHC---TT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhcC---CC-hHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 35677888888899999999999888765 33 34444555555533 344455555554
No 50
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=86.06 E-value=20 Score=34.62 Aligned_cols=46 Identities=15% Similarity=0.207 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhh
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKN 62 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn 62 (222)
+-+..++.+..+.|+|++++.+.++.++.+ |+. .+=.+-|..+|..
T Consensus 10 ~al~nLG~~~~~~G~~~eAi~~~~kAl~l~---P~~-~~a~~nLg~~l~~ 55 (723)
T 4gyw_A 10 DSLNNLANIKREQGNIEEAVRLYRKALEVF---PEF-AAAHSNLASVLQQ 55 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---SCC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCC-HHHHHHHHHHHHH
Confidence 456788999999999999999999999987 654 3444555555543
No 51
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=85.65 E-value=15 Score=30.81 Aligned_cols=180 Identities=11% Similarity=-0.011 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhccC--CCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChhhH-
Q 027558 14 ENVYMAKLAEQAERYEEMVEFMEKVSASVE--SSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHV- 90 (222)
Q Consensus 14 ~li~~AklaeqaeRy~Dm~~~mk~~i~~~~--~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~- 90 (222)
-+..++.+....|+|++++.++++.++... .+......=...+..+|- ..+....+...+....+.....++....
T Consensus 88 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 166 (411)
T 4a1s_A 88 IYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLK-VMGRFDEAAICCERHLTLARQLGDRLSEG 166 (411)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHhhchHHHH
Confidence 355788888899999999999999886530 001111122233343332 2344444444443221111111111000
Q ss_pred ----HHHHHHHH-HH-----------------HHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhcc
Q 027558 91 ----STIRDYRS-KI-----------------ETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKT 148 (222)
Q Consensus 91 ----~~i~~yk~-ki-----------------e~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~ 148 (222)
.+..-|.. .- -++-...+...+.+.... .+.......+...|..|...-.
T Consensus 167 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~la~~~~~~g~--- 238 (411)
T 4a1s_A 167 RALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDL-----GDRGAQGRACGNLGNTYYLLGD--- 238 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHcCC---
Confidence 11111111 11 234444555555554332 1223334444555555543321
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhh-hhHHHHHHHHHHhCChHHHHHHHHHhcCcc
Q 027558 149 GAERKEAAESTLTAYKAAQDIANAELAPTHPIRLG-LALNFSVFYYEILNSPDRACNLAKQVCKPE 213 (222)
Q Consensus 149 ~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLg-LaLN~SVF~yEi~~~~~~A~~iAk~Afd~A 213 (222)
.+.|...|++|+++.... .++...+ ...|.+..|+ -.|+.++|+...++|++.+
T Consensus 239 -------~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~ 293 (411)
T 4a1s_A 239 -------FQAAIEHHQERLRIAREF---GDRAAERRANSNLGNSHI-FLGQFEDAAEHYKRTLALA 293 (411)
T ss_dssp -------HHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHH
T ss_pred -------hHHHHHHHHHHHHHHHhc---CCcHHHHHHHHHHHHHHH-HCcCHHHHHHHHHHHHHHH
Confidence 346788888888887642 1222333 3344454444 4688888888888776544
No 52
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=85.20 E-value=4.9 Score=28.15 Aligned_cols=72 Identities=14% Similarity=0.100 Sum_probs=47.2
Q ss_pred HHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHH
Q 027558 129 KVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQ 208 (222)
Q Consensus 129 kvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~ 208 (222)
.+..+-..|..|...-+ .+.|...|++|++++... +.++.......|.+..++. .|+.++|+...++
T Consensus 48 ~~~~~~~l~~~~~~~g~----------~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~ 114 (164)
T 3ro3_A 48 ERIAYSNLGNAYIFLGE----------FETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTL-LQDYEKAIDYHLK 114 (164)
T ss_dssp HHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHHh--CCcHHHHHHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence 33444455665544322 356899999999998642 2233444455666776665 7999999999998
Q ss_pred hcCcc
Q 027558 209 VCKPE 213 (222)
Q Consensus 209 Afd~A 213 (222)
|++-+
T Consensus 115 a~~~~ 119 (164)
T 3ro3_A 115 HLAIA 119 (164)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87543
No 53
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=85.17 E-value=15 Score=30.39 Aligned_cols=59 Identities=10% Similarity=0.022 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHh
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISS 76 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 76 (222)
+.++.++....+.|+|++++.+++++++.+ |. +.+-...+..+|-. .+....+...+..
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~---p~-~~~~~~~lg~~~~~-~g~~~~A~~~~~~ 124 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAILQD---PG-DAEAWQFLGITQAE-NENEQAAIVALQR 124 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHHHC---TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHHhC---cC-CHHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 458899999999999999999999999876 44 35555666666653 3555556555543
No 54
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=85.09 E-value=17 Score=30.87 Aligned_cols=172 Identities=15% Similarity=0.059 Sum_probs=84.2
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCCh-hhHHHHH
Q 027558 16 VYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNE-DHVSTIR 94 (222)
Q Consensus 16 i~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~-~~~~~i~ 94 (222)
..+|....+.|+|++++.++.++++.. +. +..-...+..+|-. .+....+...+....+... .+. .......
T Consensus 147 ~~~a~~~~~~~~~~~A~~~~~~~~~~~---~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~~--~~~~~~~~l~~ 219 (450)
T 2y4t_A 147 RSQALNAFGSGDYTAAIAFLDKILEVC---VW-DAELRELRAECFIK-EGEPRKAISDLKAASKLKN--DNTEAFYKIST 219 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHC---TT-CHHHHHHHHHHHHH-TTCGGGGHHHHHHHHHHHC--SCHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC---CC-ChHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCC--CCHHHHHHHHH
Confidence 345777889999999999999999875 33 45555666666543 3555566666544332211 111 1111111
Q ss_pred HHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccch--hhhccchhHHHHHHHHHHHHHHHHHHHH
Q 027558 95 DYRS-KIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYL--AEFKTGAERKEAAESTLTAYKAAQDIAN 171 (222)
Q Consensus 95 ~yk~-kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYl--aE~~~~~~~~~~~~~a~~aY~~A~~~a~ 171 (222)
-|.. .--++-......++.+ -|.. .... ..+...+..-.++ +... .+..-.+.|...|+++++
T Consensus 220 ~~~~~g~~~~A~~~~~~~~~~-----~p~~--~~~~-~~~~~~~~~~~~~~~~~~~---~~~g~~~~A~~~~~~~l~--- 285 (450)
T 2y4t_A 220 LYYQLGDHELSLSEVRECLKL-----DQDH--KRCF-AHYKQVKKLNKLIESAEEL---IRDGRYTDATSKYESVMK--- 285 (450)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH-----CTTC--HHHH-HHHHHHHHHHHHHHHHHHH---HHHTCHHHHHHHHHHHHH---
T ss_pred HHHHcCCHHHHHHHHHHHHHh-----CCCh--HHHH-HHHHHHHHHHHHHHHHHHH---HHcCCHHHHHHHHHHHHh---
Confidence 1111 1112222222332221 1221 1111 1111111000000 0000 011124567888888875
Q ss_pred hcCCCCCcchhh-hhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 172 AELAPTHPIRLG-LALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 172 ~~L~pt~pirLg-LaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
+.|.+|.... +..+.+..+. -.|+.++|+...+++..
T Consensus 286 --~~p~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~ 323 (450)
T 2y4t_A 286 --TEPSIAEYTVRSKERICHCFS-KDEKPVEAIRVCSEVLQ 323 (450)
T ss_dssp --HCCSSHHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHH
T ss_pred --cCCcchHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHH
Confidence 3466765444 4445555544 57999999999988764
No 55
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=83.34 E-value=22 Score=30.86 Aligned_cols=162 Identities=8% Similarity=-0.025 Sum_probs=86.5
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChhhHHHHH
Q 027558 15 NVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIR 94 (222)
Q Consensus 15 li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~ 94 (222)
+..++.+....|+|++++.+++++++.+ +. .+-...+..+|-. .+..-.+...+....+..... .........
T Consensus 246 ~~~~g~~~~~~~~~~~A~~~~~~~~~~~---~~--~~~~~~l~~~~~~-~~~~~~A~~~~~~~~~~~~~~-~~~~~~l~~ 318 (537)
T 3fp2_A 246 LCYTGIFHFLKNNLLDAQVLLQESINLH---PT--PNSYIFLALTLAD-KENSQEFFKFFQKAVDLNPEY-PPTYYHRGQ 318 (537)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC---CC--HHHHHHHHHHTCC-SSCCHHHHHHHHHHHHHCTTC-HHHHHHHHH
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHhcC---CC--chHHHHHHHHHHH-hcCHHHHHHHHHHHhccCCCC-HHHHHHHHH
Confidence 5567788888999999999999999887 66 5555556665533 344455555554332221100 011111111
Q ss_pred HHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHHHHhc
Q 027558 95 DYR-SKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAE 173 (222)
Q Consensus 95 ~yk-~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~ 173 (222)
-|. ..=-++-...+..++.+ -|.. . ..+...|..|... |+ .+.|...|++|++.
T Consensus 319 ~~~~~~~~~~A~~~~~~a~~~-----~~~~--~----~~~~~la~~~~~~-----g~-----~~~A~~~~~~~~~~---- 373 (537)
T 3fp2_A 319 MYFILQDYKNAKEDFQKAQSL-----NPEN--V----YPYIQLACLLYKQ-----GK-----FTESEAFFNETKLK---- 373 (537)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH-----CTTC--S----HHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH----
T ss_pred HHHhcCCHHHHHHHHHHHHHh-----CCCC--H----HHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHHh----
Confidence 111 11112233333333332 1221 1 1223334433221 11 35678888888764
Q ss_pred CCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCcc
Q 027558 174 LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKPE 213 (222)
Q Consensus 174 L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~A 213 (222)
.|.+| ....+.+..+.. .|+.++|+...++++...
T Consensus 374 -~~~~~---~~~~~l~~~~~~-~g~~~~A~~~~~~a~~~~ 408 (537)
T 3fp2_A 374 -FPTLP---EVPTFFAEILTD-RGDFDTAIKQYDIAKRLE 408 (537)
T ss_dssp -CTTCT---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred -CCCCh---HHHHHHHHHHHH-hCCHHHHHHHHHHHHHcC
Confidence 34554 344555666665 699999999988886543
No 56
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=82.92 E-value=13 Score=27.83 Aligned_cols=59 Identities=8% Similarity=0.028 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHh
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISS 76 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 76 (222)
+-+..++.+..+.|+|++++.+++++++.. +. +.+-...+..+|-. .+....+...+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~---~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~ 67 (225)
T 2vq2_A 9 NIKTQLAMEYMRGQDYRQATASIEDALKSD---PK-NELAWLVRAEIYQY-LKVNDKAQESFRQ 67 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhC---cc-chHHHHHHHHHHHH-cCChHHHHHHHHH
Confidence 345677888888999999999999988775 43 24444555555532 3444555555543
No 57
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=82.90 E-value=19 Score=29.76 Aligned_cols=25 Identities=12% Similarity=0.050 Sum_probs=19.1
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 18 MAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 18 ~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
.+.+....|+|++++++..+.++..
T Consensus 42 a~~~~~~~g~~~~A~~~~~~al~~~ 66 (307)
T 2ifu_A 42 AAVAFKNAKQLEQAKDAYLQEAEAH 66 (307)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 3566677788888888888888664
No 58
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=82.75 E-value=18 Score=29.55 Aligned_cols=58 Identities=9% Similarity=-0.020 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHH
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIIS 75 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~ 75 (222)
+.+..++....+.|+|++++.++.++++.+ +. +.+-...+..+|-. .+....+...+.
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~---p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 122 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQD---PK-HMEAWQYLGTTQAE-NEQELLAISALR 122 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSC---TT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhC---CC-CHHHHHHHHHHHHH-CcCHHHHHHHHH
Confidence 467899999999999999999999999875 43 34555555655543 244444444443
No 59
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=81.99 E-value=27 Score=30.92 Aligned_cols=54 Identities=13% Similarity=0.058 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchh-hhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 156 AESTLTAYKAAQDIANAELAPTHPIRL-GLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~pirL-gLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
.+.|.+.|++++++... . +.+|-.. ....+.+..|+ ..|+.++|+...+++++.
T Consensus 491 ~~~A~~~~~~~~~~~~~-~-~~~p~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~ 545 (597)
T 2xpi_A 491 MQTAINHFQNALLLVKK-T-QSNEKPWAATWANLGHAYR-KLKMYDAAIDALNQGLLL 545 (597)
T ss_dssp HHHHHHHHHHHHHHHHH-S-CCCSGGGHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhc-c-ccchhhHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHh
Confidence 46789999999987653 2 3456543 34444444444 479999999999988753
No 60
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=81.86 E-value=16 Score=28.36 Aligned_cols=30 Identities=20% Similarity=0.232 Sum_probs=22.0
Q ss_pred hhhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 182 LGLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 182 LgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
....++.+..|+. +|+.++|+...+++...
T Consensus 215 ~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 244 (275)
T 1xnf_A 215 SETNFYLGKYYLS-LGDLDSATALFKLAVAN 244 (275)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHH-cCCHHHHHHHHHHHHhC
Confidence 3455666666665 69999999998888754
No 61
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=80.74 E-value=1.8 Score=32.13 Aligned_cols=55 Identities=20% Similarity=0.268 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHHhcC---CCC-------CcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 156 AESTLTAYKAAQDIANAEL---APT-------HPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L---~pt-------~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
-+.|...|++|+++..... .|+ +|....+..|.+..|+. +|+.++|+..+.+|+.
T Consensus 27 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 27 YKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHh
Confidence 3578999999999865321 233 67777888999988887 6999999999888864
No 62
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=80.72 E-value=18 Score=28.15 Aligned_cols=168 Identities=11% Similarity=0.111 Sum_probs=87.2
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCCh-hh
Q 027558 11 PREENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNE-DH 89 (222)
Q Consensus 11 ~r~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~-~~ 89 (222)
.-+-+..++.+..+.|+|++++..+.++++.+ |. +.+=...+..++-. .+....+...+........ .+. ..
T Consensus 4 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~---p~-~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~~~P--~~~~a~ 76 (217)
T 2pl2_A 4 AEQNPLRLGVQLYALGRYDAALTLFERALKEN---PQ-DPEALYWLARTQLK-LGLVNPALENGKTLVARTP--RYLGGY 76 (217)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTS---SS-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCT--TCHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CC-CHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCC--CcHHHH
Confidence 33566778888888999999999999988775 44 34555555555533 3444555555533222211 111 11
Q ss_pred HHHHHHHHHHH-----HHHHHHHHHHHHHHhhhcc--CCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHH
Q 027558 90 VSTIRDYRSKI-----ETELSSICDGILKLLDSRL--IPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTA 162 (222)
Q Consensus 90 ~~~i~~yk~ki-----e~EL~~~C~eil~lId~~L--ip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~a 162 (222)
..+-.-|...- ......-..+.+..+++.+ -|. ...+ +-..|..|.-+-. .+.|...
T Consensus 77 ~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~----~~~~--~~~lg~~~~~~g~----------~~~A~~~ 140 (217)
T 2pl2_A 77 MVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPR----YAPL--HLQRGLVYALLGE----------RDKAEAS 140 (217)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTT----CHHH--HHHHHHHHHHTTC----------HHHHHHH
T ss_pred HHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcc----cHHH--HHHHHHHHHHcCC----------hHHHHHH
Confidence 11111111110 0000011223333333332 122 1122 2344554432211 3578999
Q ss_pred HHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 163 YKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 163 Y~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
|++|+++. .+| ....|.+..|.. +|+.++|+...+++..
T Consensus 141 ~~~al~~~------~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 179 (217)
T 2pl2_A 141 LKQALALE------DTP---EIRSALAELYLS-MGRLDEALAQYAKALE 179 (217)
T ss_dssp HHHHHHHC------CCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHhcc------cch---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 99998764 222 234566666666 6999999998888764
No 63
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=80.59 E-value=20 Score=28.52 Aligned_cols=30 Identities=13% Similarity=0.015 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
+.++.+|....+.|+|++++.+++++++..
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 51 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQAA 51 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 345666666666677777777776666554
No 64
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=80.15 E-value=18 Score=27.67 Aligned_cols=30 Identities=7% Similarity=0.120 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
.-+..++.+..+.|+|++++.++++.+...
T Consensus 80 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 109 (258)
T 3uq3_A 80 KSFARIGNAYHKLGDLKKTIEYYQKSLTEH 109 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcC
Confidence 345678889999999999999999999876
No 65
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=80.10 E-value=17 Score=27.57 Aligned_cols=164 Identities=11% Similarity=0.045 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChhhHHH
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVST 92 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~ 92 (222)
..+..+|...-+.|+|++++.+++++++.+ +. +.+-...+..+|- ..+....+...+....+..... .......
T Consensus 24 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~---~~-~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~-~~~~~~l 97 (243)
T 2q7f_A 24 MTGGQQMGRGSEFGDYEKAAEAFTKAIEEN---KE-DAIPYINFANLLS-SVNELERALAFYDKALELDSSA-ATAYYGA 97 (243)
T ss_dssp ------------------CCTTHHHHHTTC---TT-CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTC-HHHHHHH
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHhC---cc-cHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCcc-hHHHHHH
Confidence 456678888889999999999999999765 33 3455555555553 2455556666554433221110 0111111
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 027558 93 IRDYR-SKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIAN 171 (222)
Q Consensus 93 i~~yk-~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~ 171 (222)
..-|. ..--++-...++.++.+- |. ...+ +...|..|... |+ .+.|...|++++++
T Consensus 98 a~~~~~~~~~~~A~~~~~~~~~~~-----~~----~~~~--~~~~a~~~~~~-----~~-----~~~A~~~~~~~~~~-- 154 (243)
T 2q7f_A 98 GNVYVVKEMYKEAKDMFEKALRAG-----ME----NGDL--FYMLGTVLVKL-----EQ-----PKLALPYLQRAVEL-- 154 (243)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHT-----CC----SHHH--HHHHHHHHHHT-----SC-----HHHHHHHHHHHHHH--
T ss_pred HHHHHHhccHHHHHHHHHHHHHhC-----CC----CHHH--HHHHHHHHHHh-----cc-----HHHHHHHHHHHHHh--
Confidence 11111 111122233333333321 22 1122 33344443221 11 35678888888764
Q ss_pred hcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 172 AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 172 ~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
.|.+| ....+.+..++. .|+.++|+...+++...
T Consensus 155 ---~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~~~~~ 188 (243)
T 2q7f_A 155 ---NENDT---EARFQFGMCLAN-EGMLDEALSQFAAVTEQ 188 (243)
T ss_dssp ---CTTCH---HHHHHHHHHHHH-HTCCHHHHHHHHHHHHH
T ss_pred ---CCccH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 23333 344566666665 69999999998887653
No 66
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=80.00 E-value=24 Score=29.08 Aligned_cols=51 Identities=4% Similarity=-0.046 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhh-hhHHHHHHHHHHhCChHHHHHHHHHhc
Q 027558 156 AESTLTAYKAAQDIANAELAPTHPIRLG-LALNFSVFYYEILNSPDRACNLAKQVC 210 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~pirLg-LaLN~SVF~yEi~~~~~~A~~iAk~Af 210 (222)
-+.|...|++|+++... .+. ++ ..+ ..+|... .|-.+|+.++|+..-+++.
T Consensus 171 ~~~A~~~~~~al~~~~~-~~~-~~-~~~~~~~~~g~-~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 171 FDEAAASLQKEKSMYKE-MEN-YP-TCYKKCIAQVL-VQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHHHHH-TTC-HH-HHHHHHHHHHH-HHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHH-cCC-hh-HHHHHHHHHHH-HHHHcCCHHHHHHHHHHHh
Confidence 35688999999998864 221 22 233 3344444 4445799999988877765
No 67
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=79.89 E-value=22 Score=28.56 Aligned_cols=167 Identities=14% Similarity=0.109 Sum_probs=87.1
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChhhHHHHHH
Q 027558 16 VYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRD 95 (222)
Q Consensus 16 i~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~ 95 (222)
..+|.+..+.|+|++++.+++++++.. + -+.+-...+..+|-. .+....+...+....+..... .........-
T Consensus 124 ~~~a~~~~~~~~~~~A~~~~~~~~~~~---~-~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~ 197 (359)
T 3ieg_A 124 RSQALDAFDGADYTAAITFLDKILEVC---V-WDAELRELRAECFIK-EGEPRKAISDLKAASKLKSDN-TEAFYKISTL 197 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC---T-TCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCSCC-HHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhC---C-CchHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHH
Confidence 344788899999999999999999875 4 345555666666544 355566666665433321110 0111111111
Q ss_pred HH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhh--------hccccchhhhccchhHHHHHHHHHHHHHHH
Q 027558 96 YR-SKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMK--------GDYHRYLAEFKTGAERKEAAESTLTAYKAA 166 (222)
Q Consensus 96 yk-~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~Kmk--------gDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 166 (222)
|. ..=.++-...+..++.+ -|. +.....+|.++. |..+. ..| -.+.|...|+++
T Consensus 198 ~~~~~~~~~A~~~~~~a~~~-----~~~--~~~~~~~~~~~~~~~~~~~~a~~~~-----~~~-----~~~~A~~~~~~~ 260 (359)
T 3ieg_A 198 YYQLGDHELSLSEVRECLKL-----DQD--HKRCFAHYKQVKKLNKLIESAEELI-----RDG-----RYTDATSKYESV 260 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHHH-----CTT--CHHHHHHHHHHHHHHHHHHHHHHHH-----HTT-----CHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhh-----Ccc--chHHHHHHHHHHHHHHHHHHHHHHH-----HcC-----CHHHHHHHHHHH
Confidence 11 11112222223332221 122 122222222221 22211 111 135678888888
Q ss_pred HHHHHhcCCCCCcchh-hhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 167 QDIANAELAPTHPIRL-GLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 167 ~~~a~~~L~pt~pirL-gLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
++. .|.+|... .+..+.+..++. .|+.++|+...+++.+
T Consensus 261 ~~~-----~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 300 (359)
T 3ieg_A 261 MKT-----EPSVAEYTVRSKERICHCFSK-DEKPVEAIRICSEVLQ 300 (359)
T ss_dssp HHH-----CCSSHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred Hhc-----CCCchHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 764 34555433 345566666665 7999999999988865
No 68
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=79.29 E-value=24 Score=28.78 Aligned_cols=53 Identities=8% Similarity=-0.017 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchh-hhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 156 AESTLTAYKAAQDIANAELAPTHPIRL-GLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~pirL-gLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
.+.|...|++|+++.... . ++... ....|.+.++.. +|++++|+..-+++.+.
T Consensus 134 ~~~A~~~~~~Al~~~~~~-~--~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 187 (292)
T 1qqe_A 134 YAKAIDCYELAGEWYAQD-Q--SVALSNKCFIKCADLKAL-DGQYIEASDIYSKLIKS 187 (292)
T ss_dssp HHHHHHHHHHHHHHHHHT-T--CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhC-C--ChHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHH
Confidence 457899999999987531 1 23222 345667777776 69999999988887654
No 69
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=79.14 E-value=4.4 Score=29.33 Aligned_cols=45 Identities=18% Similarity=0.135 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhc
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVC 210 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Af 210 (222)
+.|.+.|++|+++ .|.+| .+..|.+..|+. +|+.++|+...++|+
T Consensus 30 ~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~al 74 (126)
T 4gco_A 30 PTAMRHYNEAVKR-----DPENA---ILYSNRAACLTK-LMEFQRALDDCDTCI 74 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHh-hccHHHHHHHHHHHH
Confidence 4577777777753 33443 445566666665 588888877777665
No 70
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=78.73 E-value=20 Score=27.39 Aligned_cols=30 Identities=10% Similarity=0.000 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
.-+..++.+..+.|+|++++.++.+.++..
T Consensus 39 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~ 68 (258)
T 3uq3_A 39 TYLNNRAAAEYEKGEYETAISTLNDAVEQG 68 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHhC
Confidence 345677778888888888888888888765
No 71
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=77.87 E-value=27 Score=28.51 Aligned_cols=29 Identities=10% Similarity=-0.080 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 14 ENVYMAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 14 ~li~~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
-+-..+.+....|+|++++++..+.++..
T Consensus 39 ~~~~a~~~~~~~g~~~~A~~~~~~al~~~ 67 (292)
T 1qqe_A 39 LCVQAATIYRLRKELNLAGDSFLKAADYQ 67 (292)
T ss_dssp HHHHHHHHHHHTTCTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 45666778888899999999998888764
No 72
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=77.78 E-value=7 Score=26.08 Aligned_cols=47 Identities=15% Similarity=0.146 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
+.|...|++|+++ .|.+| ....|.+..++. +|+.++|+...++|..-
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 67 (111)
T 2l6j_A 21 REAVHCYDQLITA-----QPQNP---VGYSNKAMALIK-LGEYTQAIQMCQQGLRY 67 (111)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHHh
Confidence 5688889998865 44454 445677777776 79999999999888753
No 73
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=76.45 E-value=27 Score=27.75 Aligned_cols=56 Identities=13% Similarity=-0.056 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCC-cchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 156 AESTLTAYKAAQDIANAELAPTH-PIRLGLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~-pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
.+.|...|++|+++....-.+.+ |-......+.+..++. .|+.++|+...+++.+.
T Consensus 209 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 209 WKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRK-LKKYAEALDYHRQALVL 265 (330)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhh
Confidence 35688999999988754333222 3333455666776665 79999999999888653
No 74
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=75.69 E-value=27 Score=27.44 Aligned_cols=183 Identities=13% Similarity=0.083 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhccC----CCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhh-hh--cCC
Q 027558 14 ENVYMAKLAEQAERYEEMVEFMEKVSASVE----SSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKE-ES--RGN 86 (222)
Q Consensus 14 ~li~~AklaeqaeRy~Dm~~~mk~~i~~~~----~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~-~~--~~~ 86 (222)
-+..++.+....|+|++++.++++.++... .+.+....-...+..+|-. .+....+...+....+.. .. ...
T Consensus 71 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~a~~~~~~~~~~~~ 149 (311)
T 3nf1_A 71 MLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGK-RGKYKEAEPLCKRALEIREKVLGKDH 149 (311)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHhcCCCC
Confidence 355788888999999999999999886520 0011222233334444422 344445555554322211 10 001
Q ss_pred hhhHHH----HHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHH
Q 027558 87 EDHVST----IRDY-RSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLT 161 (222)
Q Consensus 87 ~~~~~~----i~~y-k~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~ 161 (222)
+..... ..-| ...=-++-.......+.+.....-+. ....+..+-..|..|...-. .+.|..
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~---~~~~~~~~~~la~~~~~~g~----------~~~A~~ 216 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPD---DPNVAKTKNNLASCYLKQGK----------FKQAET 216 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTT---CHHHHHHHHHHHHHHHHHTC----------HHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHHHHcCC----------HHHHHH
Confidence 111110 0000 11112333444445555544332111 22233334444554432211 356788
Q ss_pred HHHHHHHHHHh-----------------------------------------cCCCCCcchhhhhHHHHHHHHHHhCChH
Q 027558 162 AYKAAQDIANA-----------------------------------------ELAPTHPIRLGLALNFSVFYYEILNSPD 200 (222)
Q Consensus 162 aY~~A~~~a~~-----------------------------------------~L~pt~pirLgLaLN~SVF~yEi~~~~~ 200 (222)
.|++|++++.. .....+|-......+.+..|.. .|+.+
T Consensus 217 ~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~ 295 (311)
T 3nf1_A 217 LYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRR-QGKFE 295 (311)
T ss_dssp HHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHH-HTCHH
T ss_pred HHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHH-CCCHH
Confidence 88888876532 1122456666666777777766 69999
Q ss_pred HHHHHHHHhcC
Q 027558 201 RACNLAKQVCK 211 (222)
Q Consensus 201 ~A~~iAk~Afd 211 (222)
+|....++|++
T Consensus 296 ~A~~~~~~al~ 306 (311)
T 3nf1_A 296 AAETLEEAAMR 306 (311)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999888865
No 75
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=75.50 E-value=6 Score=26.82 Aligned_cols=54 Identities=7% Similarity=-0.017 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
+.|...|++|+++.. ..++.++.......+.+..++. +|+.++|....+++++.
T Consensus 55 ~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 55 NKCRELCEKAIEVGR-ENREDYRQIAKAYARIGNSYFK-EEKYKDAIHFYNKSLAE 108 (131)
T ss_dssp HHHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcc-ccchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 568889999998875 3445555545667777777776 79999999988887653
No 76
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=75.19 E-value=12 Score=28.48 Aligned_cols=50 Identities=24% Similarity=0.213 Sum_probs=38.2
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHH
Q 027558 26 ERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIIS 75 (222)
Q Consensus 26 eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~ 75 (222)
+|.|..++.+|.-+..---+++||.|-|.=|.--.|...-.-|-|+|-+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~plTEERRKeLVK~akk~aEeaKVAIRNIR 60 (121)
T 3lf9_A 11 ERMDKSVEALKNNLSKVRTGGGGTEERRKDLVKIVRGEAEGGRVAVRNIA 60 (121)
T ss_dssp HHHHHHHHHHHHHHHHCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 57788888887655321122999999999999988888888888888774
No 77
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=74.84 E-value=6.9 Score=28.11 Aligned_cols=53 Identities=8% Similarity=-0.014 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
+.|.+.|++|+++.. +.++.++.+-....|.+..+.. +|+.++|++.-++|+.
T Consensus 59 ~~A~~~~~~al~~~~-~~~~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 59 AECVQFCEKAVEVGR-ETRADYKLIAKAMSRAGNAFQK-QNDLSLAVQWFHRSLS 111 (127)
T ss_dssp HHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCc-ccchhhHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 568999999999875 3554555443345566666555 7999999998877764
No 78
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=73.06 E-value=7.1 Score=33.65 Aligned_cols=53 Identities=17% Similarity=0.206 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHHhc-CCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhc
Q 027558 157 ESTLTAYKAAQDIANAE-LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVC 210 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~-L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Af 210 (222)
+.|.+.|++|+++.+.. ....||-.+...-|.+.-|+. +|+.++|...-+++.
T Consensus 68 ~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~-~g~~~~A~~~~~ka~ 121 (472)
T 4g1t_A 68 EAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH-MGRLSDVQIYVDKVK 121 (472)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH-cCChHHHHHHHHHHH
Confidence 57899999999998643 345677777777788888887 799999987766653
No 79
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=72.71 E-value=15 Score=29.90 Aligned_cols=69 Identities=12% Similarity=0.000 Sum_probs=44.1
Q ss_pred HHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhh-hhHHHHHHHHHHhCChHHHHHHHHH
Q 027558 130 VFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLG-LALNFSVFYYEILNSPDRACNLAKQ 208 (222)
Q Consensus 130 vfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLg-LaLN~SVF~yEi~~~~~~A~~iAk~ 208 (222)
+.|+...|.+|... ++ .+.|...|++|+++.. +..++.... +..|.+++|++ +|+.++|+..-++
T Consensus 115 ~~~~~~l~~~~~~~-----~~-----~~~Ai~~~~~al~~~~---~~~~~~~~~~~~~~lg~~y~~-~g~~~~A~~~~~~ 180 (293)
T 3u3w_A 115 LQWQYYVAAYVLKK-----VD-----YEYCILELKKLLNQQL---TGIDVYQNLYIENAIANIYAE-NGYLKKGIDLFEQ 180 (293)
T ss_dssp HHHHHHHHHHHTTS-----SC-----HHHHHHHHHHHHHTCC---CCSCTTHHHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcc-----cC-----HHHHHHHHHHHHHHhc---ccccHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 44555567665221 11 3568899999998542 223333333 45566777766 7999999999999
Q ss_pred hcCc
Q 027558 209 VCKP 212 (222)
Q Consensus 209 Afd~ 212 (222)
|.+.
T Consensus 181 al~~ 184 (293)
T 3u3w_A 181 ILKQ 184 (293)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8853
No 80
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=72.61 E-value=26 Score=25.73 Aligned_cols=45 Identities=11% Similarity=0.017 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 158 STLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 158 ~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
.|...|++|+++ .|.+| ....+.+..|+. .|+.++|+...++++.
T Consensus 99 ~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 99 QTRAMIDKALAL-----DSNEI---TALMLLASDAFM-QANYAQAIELWQKVMD 143 (177)
T ss_dssp HHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cccHHHHHHHHHHHHh
Confidence 455666666543 23332 334455555554 4677776666666554
No 81
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=72.24 E-value=11 Score=24.17 Aligned_cols=47 Identities=17% Similarity=0.309 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 156 AESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
.+.|...|++|+++ .|.+| ....|.+..++. .|+.++|+...+++..
T Consensus 25 ~~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~ 71 (91)
T 1na3_A 25 YDEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (91)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 35688889888864 34443 345667777665 7999999998888765
No 82
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=71.77 E-value=9.3 Score=31.93 Aligned_cols=56 Identities=13% Similarity=0.037 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCcc
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKPE 213 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~A 213 (222)
+.|...|++|++++...-.+.+|.......|.+..+++ .|+.++|.....++.+.+
T Consensus 110 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 165 (373)
T 1hz4_A 110 QTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA-WARLDEAEASARSGIEVL 165 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHh
Confidence 46888999999988754455566666666677777776 599999999988887543
No 83
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=71.68 E-value=28 Score=25.69 Aligned_cols=72 Identities=10% Similarity=0.085 Sum_probs=46.7
Q ss_pred hHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhh-hHHHHHHHHHHhCChHHHHHHH
Q 027558 128 SKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGL-ALNFSVFYYEILNSPDRACNLA 206 (222)
Q Consensus 128 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL-aLN~SVF~yEi~~~~~~A~~iA 206 (222)
..+..+-..|..|...-+ .+.|...|++|+++++ ..+ .+|...+. ..|.+..++. +|++++|....
T Consensus 64 ~~~~~~~~l~~~~~~~g~----------~~~A~~~~~~al~~~~-~~~-~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~ 130 (203)
T 3gw4_A 64 AEHRALHQVGMVERMAGN----------WDAARRCFLEERELLA-SLP-EDPLAASANAYEVATVALH-FGDLAGARQEY 130 (203)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHH-HSC-CCHHHHHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHH-HcC-ccHHHHHHHHHHHHHHHHH-hCCHHHHHHHH
Confidence 344445556665554432 3568999999999986 343 34534444 4455555555 79999999999
Q ss_pred HHhcCc
Q 027558 207 KQVCKP 212 (222)
Q Consensus 207 k~Afd~ 212 (222)
++|++-
T Consensus 131 ~~al~~ 136 (203)
T 3gw4_A 131 EKSLVY 136 (203)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888754
No 84
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=71.47 E-value=12 Score=27.51 Aligned_cols=46 Identities=9% Similarity=0.020 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
+.|...|++|+++ .|.+ .....|.+..|+. +|+.++|+...++++.
T Consensus 62 ~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 107 (164)
T 3sz7_A 62 EKAAEDAELATVV-----DPKY---SKAWSRLGLARFD-MADYKGAKEAYEKGIE 107 (164)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 3455555555543 2333 2334445555544 5666666666665543
No 85
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=70.73 E-value=23 Score=24.40 Aligned_cols=30 Identities=13% Similarity=0.041 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
+.+..++....+.|+|++++.++.+.++.+
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 34 (126)
T 3upv_A 5 EEARLEGKEYFTKSDWPNAVKAYTEMIKRA 34 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 455667777778888888888888887765
No 86
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=69.92 E-value=13 Score=25.42 Aligned_cols=49 Identities=18% Similarity=0.181 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
+.|...|+++++ +.|.+|......++.+..++. +|+.++|+..-+++..
T Consensus 56 ~~A~~~~~~~~~-----~~p~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~ 104 (129)
T 2xev_A 56 QLAEAQFRDLVS-----RYPTHDKAAGGLLKLGLSQYG-EGKNTEAQQTLQQVAT 104 (129)
T ss_dssp HHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 567888888875 356777666666777777775 7999999998887764
No 87
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=69.57 E-value=11 Score=25.67 Aligned_cols=48 Identities=17% Similarity=0.173 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 156 AESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
.+.|...|++|+++ .|.+|. ...+.+..|+. +|+.++|+...++|++-
T Consensus 23 ~~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~~-~g~~~~A~~~~~~al~l 70 (100)
T 3ma5_A 23 ASRALALFEELVET-----DPDYVG---TYYHLGKLYER-LDRTDDAIDTYAQGIEV 70 (100)
T ss_dssp HHHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHhh
Confidence 35688888888864 344443 55666776665 79999999998888643
No 88
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=69.33 E-value=13 Score=25.67 Aligned_cols=47 Identities=13% Similarity=0.252 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
+.|...|++|+++ .|.+ .....|.+..++. +|+.++|+...++++..
T Consensus 44 ~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 44 RKAEAVLANGVKQ-----FPNH---QALRVFYAMVLYN-LGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 5688888888764 4455 4566777877776 69999999998887653
No 89
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=69.17 E-value=41 Score=26.62 Aligned_cols=31 Identities=6% Similarity=-0.068 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 12 REENVYMAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 12 r~~li~~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
-.-+..++.+..+.|+|++++.+++++++.+
T Consensus 55 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 85 (327)
T 3cv0_A 55 EEAWRSLGLTQAENEKDGLAIIALNHARMLD 85 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 3456678889999999999999999999875
No 90
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=68.89 E-value=40 Score=26.47 Aligned_cols=63 Identities=19% Similarity=0.074 Sum_probs=45.2
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhh---------hchhhhHHHHHHhhhh
Q 027558 16 VYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNV---------IGARRASWRIISSIEQ 79 (222)
Q Consensus 16 i~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~---------i~~~R~s~R~l~~ieq 79 (222)
..+|.+..+.|+|++++..++++++.. ++.....+-...+..+|.+. .+....+...+..+.+
T Consensus 152 ~~la~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~ 223 (261)
T 3qky_A 152 YEAARLYERRELYEAAAVTYEAVFDAY-PDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQ 223 (261)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-TTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHC-CCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHH
Confidence 678999999999999999999999876 22334566677777788654 2445556666554433
No 91
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=68.56 E-value=16 Score=23.87 Aligned_cols=46 Identities=15% Similarity=0.187 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
+.|...|++|+++ .|.+ .....|.+..++. +|+.++|+...+++..
T Consensus 23 ~~A~~~~~~a~~~-----~~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 68 (112)
T 2kck_A 23 TESIDLFEKAIQL-----DPEE---SKYWLMKGKALYN-LERYEEAVDCYNYVIN 68 (112)
T ss_dssp HHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcCC---HHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 3566666666653 2222 2344555665555 5777777777666654
No 92
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.62 E-value=9.9 Score=26.54 Aligned_cols=24 Identities=17% Similarity=-0.007 Sum_probs=12.2
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHhc
Q 027558 186 LNFSVFYYEILNSPDRACNLAKQVC 210 (222)
Q Consensus 186 LN~SVF~yEi~~~~~~A~~iAk~Af 210 (222)
.+.+..++. +|+.++|+...++++
T Consensus 103 ~~~a~~~~~-~~~~~~A~~~~~~al 126 (148)
T 2dba_A 103 YRRSQALEK-LGRLDQAVLDLQRCV 126 (148)
T ss_dssp HHHHHHHHH-HTCHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCHHHHHHHHHHHH
Confidence 344444443 466666665555554
No 93
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=66.58 E-value=19 Score=23.64 Aligned_cols=47 Identities=17% Similarity=0.105 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
+.|...|++|++. .|.+|.. ...|.+..|+. +|+.++|+...+++..
T Consensus 17 ~~A~~~~~~al~~-----~p~~~~~--~~~~lg~~~~~-~~~~~~A~~~~~~al~ 63 (99)
T 2kc7_A 17 ENALQALEEFLQT-----EPVGKDE--AYYLMGNAYRK-LGDWQKALNNYQSAIE 63 (99)
T ss_dssp HHHHHHHHHHHHH-----CSSTHHH--HHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcHHH--HHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 4678888888753 4455421 55667777776 6999999998888764
No 94
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=65.59 E-value=43 Score=25.62 Aligned_cols=62 Identities=10% Similarity=-0.049 Sum_probs=42.9
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhh
Q 027558 12 REENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIE 78 (222)
Q Consensus 12 r~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ie 78 (222)
..-+..+|.+..+.|+|++++++++++++.+ +. +..-...+..+|-. .+....+.+.+....
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~---~~-~~~~~~~la~~~~~-~g~~~~A~~~~~~~~ 132 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALASD---SR-NARVLNNYGGFLYE-QKRYEEAYQRLLEAS 132 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC---cC-cHHHHHHHHHHHHH-HhHHHHHHHHHHHHH
Confidence 3456678899999999999999999999876 43 34445555555543 455566666665443
No 95
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=65.01 E-value=28 Score=37.08 Aligned_cols=24 Identities=8% Similarity=0.050 Sum_probs=20.2
Q ss_pred HHHHHHHHHhCChHHHHHHHHHhc
Q 027558 187 NFSVFYYEILNSPDRACNLAKQVC 210 (222)
Q Consensus 187 N~SVF~yEi~~~~~~A~~iAk~Af 210 (222)
.--|-||+-.|..++|+.+..+|.
T Consensus 1284 eeli~yYe~~G~feEAI~LlE~aL 1307 (1630)
T 1xi4_A 1284 EELINYYQDRGYFEELITMLEAAL 1307 (1630)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHh
Confidence 345678899999999999998884
No 96
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=64.59 E-value=35 Score=24.20 Aligned_cols=161 Identities=16% Similarity=0.100 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCCh-hhHHH
Q 027558 14 ENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNE-DHVST 92 (222)
Q Consensus 14 ~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~-~~~~~ 92 (222)
-+..++....+.|+|++++..++++++.. +. +..-...+..+|- ..+....+...+....+... .+. .....
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~---~~-~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~--~~~~~~~~~ 82 (186)
T 3as5_A 10 YYRDKGISHAKAGRYSQAVMLLEQVYDAD---AF-DVDVALHLGIAYV-KTGAVDRGTELLERSLADAP--DNVKVATVL 82 (186)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTTTCCTT---SC-CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCT--TCHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhC---cc-ChHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCC--CCHHHHHHH
Confidence 34467888888899999999998887654 33 3333444444443 23444455555443222211 111 11111
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 027558 93 IRDYR-SKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIAN 171 (222)
Q Consensus 93 i~~yk-~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~ 171 (222)
..-|. ..=-++-....+.++.+ -|. ...+ +...|..|.-. |+ .+.|...|+++++..
T Consensus 83 a~~~~~~~~~~~A~~~~~~~~~~-----~~~----~~~~--~~~~a~~~~~~-----~~-----~~~A~~~~~~~~~~~- 140 (186)
T 3as5_A 83 GLTYVQVQKYDLAVPLLIKVAEA-----NPI----NFNV--RFRLGVALDNL-----GR-----FDEAIDSFKIALGLR- 140 (186)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHH-----CTT----CHHH--HHHHHHHHHHT-----TC-----HHHHHHHHHHHHHHC-
T ss_pred HHHHHHhcCHHHHHHHHHHHHhc-----CcH----hHHH--HHHHHHHHHHc-----Cc-----HHHHHHHHHHHHhcC-
Confidence 11111 11112222233333322 121 1122 22333333211 11 356788888887642
Q ss_pred hcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 172 AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 172 ~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
|.+| ....+.+..++. .|+.++|....+++.+
T Consensus 141 ----~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 172 (186)
T 3as5_A 141 ----PNEG---KVHRAIAFSYEQ-MGRHEEALPHFKKANE 172 (186)
T ss_dssp ----TTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred ----ccch---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 3443 344556666665 7999999999888764
No 97
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=63.77 E-value=49 Score=25.59 Aligned_cols=64 Identities=13% Similarity=0.027 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhh
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIE 78 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ie 78 (222)
+.+..+|...-+.|+|++++..+++++... +..+...+-...+..+|-. .+....+...+..+.
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~-p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l 68 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRY-PFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFI 68 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHH
Confidence 456678888889999999999999999765 1123444555555555533 455566666655443
No 98
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=63.43 E-value=65 Score=26.93 Aligned_cols=54 Identities=6% Similarity=0.112 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCcc
Q 027558 156 AESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKPE 213 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~A 213 (222)
.+.|...|++|+++++..- +|.......|.+..|+. +|+.++|+...++|++-+
T Consensus 238 ~~~A~~~~~~al~~~~~~~---~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 291 (378)
T 3q15_A 238 DQMAVEHFQKAAKVSREKV---PDLLPKVLFGLSWTLCK-AGQTQKAFQFIEEGLDHI 291 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHC---GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhhC---ChhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHH
Confidence 4678999999999987543 34444555666777665 799999999999987654
No 99
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=63.32 E-value=63 Score=26.74 Aligned_cols=30 Identities=10% Similarity=0.137 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
+-+..++.+..+.|+|++++.++++.+..+
T Consensus 68 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 97 (388)
T 1w3b_A 68 EAYSNLGNVYKERGQLQEAIEHYRHALRLK 97 (388)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHcC
Confidence 345666777777777777777777777665
No 100
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=63.28 E-value=23 Score=23.11 Aligned_cols=47 Identities=13% Similarity=-0.074 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
+.|...|++++++ .|.+| ....+.+..++. +|+.++|....+++.+.
T Consensus 55 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 101 (118)
T 1elw_A 55 QKAYEDGCKTVDL-----KPDWG---KGYSRKAAALEF-LNRFEEAKRTYEEGLKH 101 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHHc
Confidence 4677888888764 34443 455666666665 79999999998888754
No 101
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=63.07 E-value=42 Score=24.61 Aligned_cols=73 Identities=5% Similarity=-0.164 Sum_probs=45.5
Q ss_pred hHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHH
Q 027558 128 SKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAK 207 (222)
Q Consensus 128 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk 207 (222)
..+..+-..|..|...-+ .+.|...|++|++++.. . .+|...+.+++.-...|.-.|++++|....+
T Consensus 105 ~~~~~~~~lg~~~~~~g~----------~~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 171 (203)
T 3gw4_A 105 AASANAYEVATVALHFGD----------LAGARQEYEKSLVYAQQ-A--DDQVAIACAFRGLGDLAQQEKNLLEAQQHWL 171 (203)
T ss_dssp HHHHHHHHHHHHHHHHTC----------HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCC----------HHHHHHHHHHHHHHHHh-c--cchHHHHHHHHHHHHHHHHCcCHHHHHHHHH
Confidence 344445555555443322 45689999999998763 2 2444455544443344445799999999988
Q ss_pred HhcCcc
Q 027558 208 QVCKPE 213 (222)
Q Consensus 208 ~Afd~A 213 (222)
+|++-+
T Consensus 172 ~al~~~ 177 (203)
T 3gw4_A 172 RARDIF 177 (203)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887643
No 102
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=62.63 E-value=18 Score=24.94 Aligned_cols=25 Identities=16% Similarity=-0.092 Sum_probs=11.7
Q ss_pred hHHHHHHHHHHhCChHHHHHHHHHhc
Q 027558 185 ALNFSVFYYEILNSPDRACNLAKQVC 210 (222)
Q Consensus 185 aLN~SVF~yEi~~~~~~A~~iAk~Af 210 (222)
..|.+..++. +|+.++|+...++|+
T Consensus 41 ~~~~a~~~~~-~~~~~~A~~~~~~al 65 (126)
T 3upv_A 41 YSNRAAALAK-LMSFPEAIADCNKAI 65 (126)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-hcCHHHHHHHHHHHH
Confidence 3344444443 455555555554443
No 103
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=62.46 E-value=19 Score=24.34 Aligned_cols=47 Identities=9% Similarity=0.041 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
+.|...|++|+++ .|.+| ....+.+..++. +|+.++|+...++++..
T Consensus 67 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 67 QLALKDCEECIQL-----EPTFI---KGYTRKAAALEA-MKDYTKAMDVYQKALDL 113 (133)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCch---HHHHHHHHHHHH-HhhHHHHHHHHHHHHHh
Confidence 4678888888764 33443 455666666665 79999999998887653
No 104
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=62.37 E-value=18 Score=25.89 Aligned_cols=47 Identities=4% Similarity=-0.035 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 156 AESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
.+.|.+.|++|+++ .|.++ ....|.+..|+. +|+.++|+..-++|+.
T Consensus 63 ~~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 63 FQRALDDCDTCIRL-----DSKFI---KGYIRKAACLVA-MREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----hhhhh---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 35688889998864 44554 345666666665 7999999988887764
No 105
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=60.70 E-value=22 Score=23.76 Aligned_cols=49 Identities=18% Similarity=0.356 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCcc
Q 027558 156 AESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKPE 213 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~A 213 (222)
.+.|...|++|++. .|.+| ....+.+..++. .|+.++|+...+++.+..
T Consensus 20 ~~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~ 68 (131)
T 1elr_A 20 FDTALKHYDKAKEL-----DPTNM---TYITNQAAVYFE-KGDYNKCRELCEKAIEVG 68 (131)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHhhc
Confidence 35678888888764 23443 445667777766 699999999988887643
No 106
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=60.59 E-value=1.2e+02 Score=29.06 Aligned_cols=33 Identities=9% Similarity=0.140 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCC
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEEL 48 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~L 48 (222)
+-+..++.+..+.|+|++++.+.++.++.+ ++.
T Consensus 44 ~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~---P~~ 76 (723)
T 4gyw_A 44 AAHSNLASVLQQQGKLQEALMHYKEAIRIS---PTF 76 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCC
Confidence 456678999999999999999999999987 654
No 107
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=60.39 E-value=22 Score=27.89 Aligned_cols=54 Identities=15% Similarity=0.174 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhh-----hhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 156 AESTLTAYKAAQDIANAELAPTHPIRLG-----LALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~pirLg-----LaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
-+.|..+|++|+++.-. .|+..++.+. .-.|-+.-+.. +|+.++|+....+|+.
T Consensus 27 ~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~ 85 (159)
T 2hr2_A 27 YDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALH 85 (159)
T ss_dssp HHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 46799999999998743 3333333333 77777777776 7999999998887764
No 108
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=60.04 E-value=39 Score=23.30 Aligned_cols=53 Identities=15% Similarity=0.023 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
..|..-|++|++.....- ...+.+-.+..++++-+|. +|+.++|+...++|..
T Consensus 22 ~~A~~W~~~Al~~~~~~~-~~~~~~~~i~~~L~~~~~~-~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 22 YHTELWMEQALRQLDEGE-ISTIDKVSVLDYLSYAVYQ-QGDLDKALLLTKKLLE 74 (104)
T ss_dssp HHHHHHHHHHHHHHHTTC-CCSSCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccC-CCcccHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHh
Confidence 457788888887664221 1123444556677776775 7999999999988864
No 109
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=59.86 E-value=77 Score=26.59 Aligned_cols=29 Identities=7% Similarity=0.014 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 14 ENVYMAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 14 ~li~~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
-+..++.+..+.|+|++++.+.++.++..
T Consensus 149 ~~~~~g~~~~~~g~~~~A~~~y~~Al~~~ 177 (336)
T 1p5q_A 149 IVKERGTVYFKEGKYKQALLQYKKIVSWL 177 (336)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 34567888889999999999999999876
No 110
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=59.68 E-value=11 Score=26.35 Aligned_cols=30 Identities=13% Similarity=0.010 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
.-++.++.++.+.|+|++++.+..++.+.+
T Consensus 44 rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~ 73 (93)
T 3bee_A 44 AALSLIANDHFISFRFQEAIDTWVLLLDSN 73 (93)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 456777888888888888888888887765
No 111
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=59.09 E-value=27 Score=24.10 Aligned_cols=25 Identities=16% Similarity=0.113 Sum_probs=11.5
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 186 LNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 186 LN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
.+.+..++. +|+.++|+...++++.
T Consensus 81 ~~l~~~~~~-~~~~~~A~~~~~~a~~ 105 (137)
T 3q49_B 81 FFLGQCQLE-MESYDEAIANLQRAYS 105 (137)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HhhHHHHHHHHHHHHH
Confidence 333443333 3555555555554443
No 112
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=58.81 E-value=24 Score=23.94 Aligned_cols=47 Identities=15% Similarity=-0.021 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 156 AESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
.+.|...|++|+++ .|.++ ....+.+..|.. +|+.++|+...++++.
T Consensus 35 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 81 (115)
T 2kat_A 35 FDAALPHLRAALDF-----DPTYS---VAWKWLGKTLQG-QGDRAGARQAWESGLA 81 (115)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35688889888864 34443 344666666665 7999999998888765
No 113
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=58.54 E-value=24 Score=25.90 Aligned_cols=47 Identities=19% Similarity=0.323 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 156 AESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
-+.|.+.|++|+++ .|.|| ....+.+..|+. +|+.++|+...+++..
T Consensus 21 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~~~~~~a~~~~~~~~~ 67 (184)
T 3vtx_A 21 FDGAIRAYKKVLKA-----DPNNV---ETLLKLGKTYMD-IGLPNDAIESLKKFVV 67 (184)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 35688889988864 45554 334455555555 6888888888777643
No 114
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=58.22 E-value=40 Score=22.78 Aligned_cols=60 Identities=10% Similarity=0.076 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHh
Q 027558 12 REENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISS 76 (222)
Q Consensus 12 r~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 76 (222)
-.-+..++.+..+.|+|++++.++++.+..+ +.. .+-...+..+|.. .+....+...+..
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~---p~~-~~~~~~la~~~~~-~g~~~~A~~~~~~ 78 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALDFD---PTY-SVAWKWLGKTLQG-QGDRAGARQAWES 78 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TTC-HHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHC---CCc-HHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 4556788999999999999999999999886 543 4455666666654 3555555555543
No 115
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=57.60 E-value=14 Score=32.12 Aligned_cols=54 Identities=15% Similarity=0.196 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHhc--------CCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 157 ESTLTAYKAAQDIANAE--------LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~--------L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
+.|...|++|+++.... ....+|....+.+|.+..|+. +++.++|+...++|+.
T Consensus 240 ~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 240 EMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHH
Confidence 45777888888765321 011456667777888877775 6888888888887775
No 116
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=56.56 E-value=42 Score=22.52 Aligned_cols=57 Identities=7% Similarity=0.064 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHH
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRII 74 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l 74 (222)
.-+..++.+..+.|+|++++.+++++++.+ |... .=...+..+|.. .+..-.+...+
T Consensus 8 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~---p~~~-~a~~~lg~~~~~-~g~~~~A~~~~ 64 (100)
T 3ma5_A 8 FTRYALAQEHLKHDNASRALALFEELVETD---PDYV-GTYYHLGKLYER-LDRTDDAIDTY 64 (100)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS---TTCT-HHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCcH-HHHHHHHHHHHH-cCCHHHHHHHH
Confidence 456788999999999999999999999887 6543 345556666644 34444444444
No 117
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=56.16 E-value=31 Score=25.17 Aligned_cols=28 Identities=21% Similarity=0.309 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 15 NVYMAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 15 li~~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
...+|++..+.|+|++++++++++++.+
T Consensus 34 ~~~la~~y~~~~~~~~A~~~~~~al~~~ 61 (150)
T 4ga2_A 34 GFYFAKLYYEAKEYDLAKKYICTYINVQ 61 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 4678999999999999999999999886
No 118
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=55.89 E-value=30 Score=22.99 Aligned_cols=26 Identities=15% Similarity=0.031 Sum_probs=14.9
Q ss_pred hHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 185 ALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 185 aLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
..+.+..++. +|+.++|+...++++.
T Consensus 83 ~~~~~~~~~~-~~~~~~A~~~~~~~~~ 108 (131)
T 2vyi_A 83 YGRMGLALSS-LNKHVEAVAYYKKALE 108 (131)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-hCCHHHHHHHHHHHHh
Confidence 3444444444 5777777766666543
No 119
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=55.33 E-value=31 Score=22.91 Aligned_cols=29 Identities=17% Similarity=0.101 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 14 ENVYMAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 14 ~li~~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
-+..++.+....|+|++++.++++++...
T Consensus 14 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 42 (131)
T 2vyi_A 14 RLKTEGNEQMKVENFEAAVHFYGKAIELN 42 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHcC
Confidence 34455666666777777777776666543
No 120
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=55.32 E-value=28 Score=25.47 Aligned_cols=46 Identities=7% Similarity=0.009 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
+.|..+|++|+.+ .|.|| ...+|.++.|+. +|+.++|+...++|..
T Consensus 72 ~~A~~~~~~al~l-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 117 (148)
T 2vgx_A 72 DLAIHSYSYGAVM-----DIXEP---RFPFHAAECLLQ-XGELAEAESGLFLAQE 117 (148)
T ss_dssp HHHHHHHHHHHHH-----STTCT---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCc---hHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5689999999864 45665 345677777776 7999999988887764
No 121
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=55.18 E-value=33 Score=22.35 Aligned_cols=48 Identities=19% Similarity=0.180 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 156 AESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
.+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...+++++.
T Consensus 20 ~~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 20 IDDALQCYSEAIKL-----DPHNH---VLYSNRSAAYAK-KGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Confidence 35678888888754 34443 345566666665 79999999999888653
No 122
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=54.84 E-value=57 Score=23.52 Aligned_cols=46 Identities=9% Similarity=-0.110 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
+.|...|++|+++ .|.+| ...++.+..|+. +|+.++|+...++|+.
T Consensus 80 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~~~~~-~g~~~~A~~~~~~al~ 125 (162)
T 3rkv_A 80 HEAEETSSEVLKR-----EETNE---KALFRRAKARIA-AWKLDEAEEDLKLLLR 125 (162)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCcch---HHHHHHHHHHHH-HhcHHHHHHHHHHHHh
Confidence 4677888888765 45554 445566666665 7999999998887764
No 123
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=54.10 E-value=30 Score=24.46 Aligned_cols=27 Identities=19% Similarity=0.137 Sum_probs=14.5
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhc
Q 027558 15 NVYMAKLAEQAERYEEMVEFMEKVSAS 41 (222)
Q Consensus 15 li~~AklaeqaeRy~Dm~~~mk~~i~~ 41 (222)
+..+|....+.|+|++++.++++.+..
T Consensus 16 ~~~~a~~~~~~~~~~~A~~~~~~al~~ 42 (166)
T 1a17_A 16 LKTQANDYFKAKDYENAIKFYSQAIEL 42 (166)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 344455555555565555555555543
No 124
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=53.43 E-value=95 Score=25.63 Aligned_cols=46 Identities=15% Similarity=0.120 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHh
Q 027558 12 REENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYK 61 (222)
Q Consensus 12 r~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayK 61 (222)
-.-+..++.+..+.++++++..+.+..+..+ |. +.+-...+..+|.
T Consensus 33 ~~~~~~l~~~~~~~~~~~~a~~~~~~a~~~~---p~-~~~~~~~lg~~~~ 78 (388)
T 1w3b_A 33 TGVLLLLSSIHFQCRRLDRSAHFSTLAIKQN---PL-LAEAYSNLGNVYK 78 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TT-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC---CC-chHHHHHHHHHHH
Confidence 3456678888888999999999998888765 43 4445555555543
No 125
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=53.02 E-value=29 Score=19.66 Aligned_cols=27 Identities=33% Similarity=0.529 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 027558 91 STIRDYRSKIETELSSICDGILKLLDS 117 (222)
Q Consensus 91 ~~i~~yk~kie~EL~~~C~eil~lId~ 117 (222)
+.++.||.+|.+.|..+.+.|-.++.+
T Consensus 4 krlrkfrnkikeklkkigqkiqgllpk 30 (32)
T 1lyp_A 4 KRLRKFRNKIKEKLKKIGQKIQGLLPK 30 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 457889999999999999998877643
No 126
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=52.78 E-value=26 Score=29.06 Aligned_cols=69 Identities=19% Similarity=0.137 Sum_probs=45.0
Q ss_pred CCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhh----hhhhcCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 027558 46 EELTVEERNLLSVAYKNVIGARRASWRIISSIEQ----KEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRL 119 (222)
Q Consensus 46 ~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yk~kie~EL~~~C~eil~lId~~L 119 (222)
|+||.|-|.=|....|...-.-|-+.|.+..--. +.+..+ ..-++-.++.++|+..+.++.+.-||..+
T Consensus 127 P~LTeErRkelvK~ak~~~E~aKvaIRniRrda~~~lKk~~K~~-----~isEDe~k~~e~eiQklTd~~i~~iD~~l 199 (209)
T 4gfq_A 127 PALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAG-----EITEDDLRGYTEDIQKETDKYIAKVDEIA 199 (209)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999998888888888742111 111111 01134445666777777777777776554
No 127
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=52.40 E-value=31 Score=25.17 Aligned_cols=45 Identities=9% Similarity=0.090 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhc
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVC 210 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Af 210 (222)
++|.+.|++|+++ .|.|| ..-.|.+..|+. +|+.++|+..-++|+
T Consensus 48 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~~~~~~A~~~~~~al 92 (150)
T 4ga2_A 48 DLAKKYICTYINV-----QERDP---KAHRFLGLLYEL-EENTDKAVECYRRSV 92 (150)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-cCchHHHHHHHHHHH
Confidence 4566666666643 34443 233344444443 577777776666554
No 128
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=52.37 E-value=44 Score=22.82 Aligned_cols=58 Identities=9% Similarity=0.082 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHH
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIIS 75 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~ 75 (222)
.-+..++.+..+.|+|++++.+++++++.+ |+- .+=...+..+|-. .+....+...+.
T Consensus 28 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~---p~~-~~~~~~l~~~~~~-~g~~~~A~~~~~ 85 (117)
T 3k9i_A 28 ECYLGLGSTFRTLGEYRKAEAVLANGVKQF---PNH-QALRVFYAMVLYN-LGRYEQGVELLL 85 (117)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TTC-HHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCc-hHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 345678889999999999999999999886 553 4455555665544 344555555543
No 129
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=52.09 E-value=32 Score=24.56 Aligned_cols=46 Identities=15% Similarity=0.102 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
+.|..+|++|+.+ .|.||. ..+|.+..|+. +|+.++|+...+++..
T Consensus 69 ~~A~~~~~~al~~-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~ 114 (142)
T 2xcb_A 69 EQALQSYSYGALM-----DINEPR---FPFHAAECHLQ-LGDLDGAESGFYSARA 114 (142)
T ss_dssp HHHHHHHHHHHHH-----CTTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5688999998764 466663 34667777666 7999999998887764
No 130
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=52.07 E-value=1.2e+02 Score=26.37 Aligned_cols=58 Identities=12% Similarity=0.127 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhch-hhhHHHHHH
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGA-RRASWRIIS 75 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~-~R~s~R~l~ 75 (222)
+-+.+++.+..+.|+|++++....+++..+ |. +.+=.+.+..++... +. ...+...+.
T Consensus 98 ~a~~~lg~~~~~~g~~~~Al~~~~~al~l~---P~-~~~a~~~~g~~l~~~-g~d~~eAl~~~~ 156 (382)
T 2h6f_A 98 DVYDYFRAVLQRDERSERAFKLTRDAIELN---AA-NYTVWHFRRVLLKSL-QKDLHEEMNYIT 156 (382)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHHHC---TT-CHHHHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHHhC---cc-CHHHHHHHHHHHHHc-ccCHHHHHHHHH
Confidence 445678888889999999999999999887 54 334444555555443 32 444544443
No 131
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=51.95 E-value=38 Score=22.17 Aligned_cols=26 Identities=19% Similarity=0.245 Sum_probs=14.9
Q ss_pred hHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 185 ALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 185 aLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
..+.+..++. .|+.++|....+++++
T Consensus 80 ~~~la~~~~~-~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 80 WYNLGNAYYK-QGDYDEAIEYYQKALE 105 (125)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 3445555554 5677777666666543
No 132
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.58 E-value=42 Score=23.09 Aligned_cols=31 Identities=6% Similarity=-0.124 Sum_probs=23.4
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 12 REENVYMAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 12 r~~li~~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
-+.+..+|....+.|+|++++.++.+.++..
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~ 58 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLD 58 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHc
Confidence 3566677777778888888888888877654
No 133
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=51.50 E-value=65 Score=23.23 Aligned_cols=27 Identities=7% Similarity=0.095 Sum_probs=12.7
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhc
Q 027558 15 NVYMAKLAEQAERYEEMVEFMEKVSAS 41 (222)
Q Consensus 15 li~~AklaeqaeRy~Dm~~~mk~~i~~ 41 (222)
+..++.+..+.|+|++++.++.+.++.
T Consensus 14 ~~~~g~~~~~~g~~~~A~~~~~~al~~ 40 (164)
T 3sz7_A 14 LKSEGNAAMARKEYSKAIDLYTQALSI 40 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 334444444445555555555444444
No 134
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=51.08 E-value=40 Score=22.06 Aligned_cols=29 Identities=14% Similarity=0.174 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 14 ENVYMAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 14 ~li~~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
-+..++.+..+.|+|++++..+++++...
T Consensus 11 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 39 (125)
T 1na0_A 11 AWYNLGNAYYKQGDYDEAIEYYQKALELD 39 (125)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 44556677777777777777777666543
No 135
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=50.81 E-value=37 Score=27.49 Aligned_cols=174 Identities=12% Similarity=0.007 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH-----hhhhchhhhHHHHHHh-hhhhhhhcCCh
Q 027558 14 ENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAY-----KNVIGARRASWRIISS-IEQKEESRGNE 87 (222)
Q Consensus 14 ~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ay-----Kn~i~~~R~s~R~l~~-ieqk~~~~~~~ 87 (222)
.+...+...-..|+|+++++.+++.++.. +. ..+....+..-+ -...+..-.|...+.. ++..... .+.
T Consensus 77 ~l~~~~~~~~~~~~y~~A~~~~~~~l~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~-~~~ 151 (293)
T 2qfc_A 77 QFKDQVIMLCKQKRYKEIYNKVWNELKKE---EY-HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTG-IDV 151 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTC---CC-CHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCS-SCT
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhccc---cC-ChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcC-Cch
Confidence 44566677778899999999999988765 44 333222111111 1112233345444432 1111111 111
Q ss_pred hh-H----HHHHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHH
Q 027558 88 DH-V----STIRDY-RSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLT 161 (222)
Q Consensus 88 ~~-~----~~i~~y-k~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~ 161 (222)
.. . ..-.-| ...=-++-....+..+.+.+. .|. +....+..+-..|..|..+-+ -++|..
T Consensus 152 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~--~~~--~~~~~~~~~~nlg~~y~~~~~----------y~~Al~ 217 (293)
T 2qfc_A 152 YQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEA--LHD--NEEFDVKVRYNHAKALYLDSR----------YEESLY 217 (293)
T ss_dssp THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--SCC--CHHHHHHHHHHHHHHHHHTTC----------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh--cCc--cccchHHHHHhHHHHHHHHhh----------HHHHHH
Confidence 10 1 000111 111123445555566655543 222 111121223344554432211 357899
Q ss_pred HHHHHHHHHHhcCCCCCcchhhhh-HHHHHHHHHHhCChHHH-HHHHHHhc
Q 027558 162 AYKAAQDIANAELAPTHPIRLGLA-LNFSVFYYEILNSPDRA-CNLAKQVC 210 (222)
Q Consensus 162 aY~~A~~~a~~~L~pt~pirLgLa-LN~SVF~yEi~~~~~~A-~~iAk~Af 210 (222)
.|++|++++.. ..++..++.+ .|.+..|+ -+|+.++| ....++|.
T Consensus 218 ~~~kal~~~~~---~~~~~~~~~~~~~lg~~y~-~~g~~~~Ai~~~~~~Al 264 (293)
T 2qfc_A 218 QVNKAIEISCR---INSMALIGQLYYQRGECLR-KLEYEEAEIEDAYKKAS 264 (293)
T ss_dssp HHHHHHHHHHH---TTBCSSHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh---cCcHHHHHHHHHHHHHHHH-HcCCcHHHHHHHHHHHH
Confidence 99999999853 2334445544 45555554 57999999 44455553
No 136
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=50.57 E-value=36 Score=27.79 Aligned_cols=24 Identities=17% Similarity=0.360 Sum_probs=10.6
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHhc
Q 027558 186 LNFSVFYYEILNSPDRACNLAKQVC 210 (222)
Q Consensus 186 LN~SVF~yEi~~~~~~A~~iAk~Af 210 (222)
.|.+..|+. +|+.++|+...++|.
T Consensus 42 ~~la~~~~~-~~~~~~A~~~~~~al 65 (281)
T 2c2l_A 42 TNRALCYLK-MQQPEQALADCRRAL 65 (281)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHT
T ss_pred HHHHHHHHH-hcCHHHHHHHHHHHH
Confidence 344443333 345555544444443
No 137
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=50.33 E-value=42 Score=31.05 Aligned_cols=26 Identities=23% Similarity=0.374 Sum_probs=21.0
Q ss_pred hhhccccchhhhccchhHHHHHHHHHHHHHHHHHHH
Q 027558 135 MKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIA 170 (222)
Q Consensus 135 mkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 170 (222)
--||..||...+ ..|...|++|..+.
T Consensus 157 ~LGDL~RY~~~~----------~~A~~~Y~~A~~~~ 182 (497)
T 1ya0_A 157 HLGDIARYRNQT----------SQAESYYRHAAQLV 182 (497)
T ss_dssp HHHHHHHHTTCH----------HHHHHHHHHHHHHC
T ss_pred HcccHHHHHHHH----------HHHHHHHHHHHHhC
Confidence 379999999764 57899999998654
No 138
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=50.04 E-value=37 Score=23.93 Aligned_cols=27 Identities=15% Similarity=-0.122 Sum_probs=16.7
Q ss_pred hhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 184 LALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 184 LaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
...+.+..++. +|+.++|+...++++.
T Consensus 83 ~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 109 (166)
T 1a17_A 83 GYYRRAASNMA-LGKFRAALRDYETVVK 109 (166)
T ss_dssp HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 44455555554 5777777777766653
No 139
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=49.49 E-value=28 Score=26.14 Aligned_cols=47 Identities=13% Similarity=0.092 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 156 AESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
-+.|..+|++|+.+ .|.||. ...|.++.|.. +|++++|+..-++|..
T Consensus 86 ~~~Ai~~~~~al~l-----~P~~~~---~~~~lg~~~~~-lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 86 FQQAADLYAVAFAL-----GKNDYT---PVFHTGQCQLR-LKAPLKAKECFELVIQ 132 (151)
T ss_dssp HHHHHHHHHHHHHH-----SSSCCH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35689999999864 466663 45677777775 7999999988887764
No 140
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=47.99 E-value=38 Score=25.31 Aligned_cols=48 Identities=13% Similarity=0.084 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCc
Q 027558 156 AESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKP 212 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~ 212 (222)
.+.|...|++|+.+ .|.+| ....|.+..|+. +|+.++|+...+++++.
T Consensus 53 ~~~A~~~~~~al~~-----~~~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~~ 100 (213)
T 1hh8_A 53 MTEAEKAFTRSINR-----DKHLA---VAYFQRGMLYYQ-TEKYDLAIKDLKEALIQ 100 (213)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh-----Cccch---HHHHHHHHHHHH-cccHHHHHHHHHHHHHh
Confidence 35688899998865 24443 455677777776 79999999998888763
No 141
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=47.01 E-value=40 Score=25.36 Aligned_cols=46 Identities=7% Similarity=-0.008 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
+.|...|++|+++ .|.+ ....++.+..|+. +|+.++|+...++|+.
T Consensus 105 ~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 150 (198)
T 2fbn_A 105 PKAIDHASKVLKI-----DKNN---VKALYKLGVANMY-FGFLEEAKENLYKAAS 150 (198)
T ss_dssp HHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----Cccc---HHHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 4678888888865 3344 3455666777665 7999999998888764
No 142
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=46.81 E-value=33 Score=24.13 Aligned_cols=46 Identities=11% Similarity=0.049 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
+.|..+|++|+++ .|.+| ....|.++.|.. .|+.++|+...++++.
T Consensus 68 ~~A~~~~~~al~l-----~P~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 113 (121)
T 1hxi_A 68 GLAIIALNHARML-----DPKDI---AVHAALAVSHTN-EHNANAALASLRAWLL 113 (121)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5688999998764 45554 344666676665 6999999998888765
No 143
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=45.72 E-value=99 Score=23.63 Aligned_cols=59 Identities=14% Similarity=0.001 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHh
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISS 76 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 76 (222)
.-+..++.+....|+|++++.++++.++.+ +. +.+-...+..+|-. .+....+.+.+..
T Consensus 44 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~---~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~ 102 (275)
T 1xnf_A 44 QLLYERGVLYDSLGLRALARNDFSQALAIR---PD-MPEVFNYLGIYLTQ-AGNFDAAYEAFDS 102 (275)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---CC-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHcC---CC-cHHHHHHHHHHHHH-ccCHHHHHHHHHH
Confidence 345677888889999999999999999876 44 44455556655543 3455555555543
No 144
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=45.62 E-value=42 Score=25.74 Aligned_cols=31 Identities=16% Similarity=0.127 Sum_probs=27.4
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 12 REENVYMAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 12 r~~li~~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
-+.++..+...-+.|+|++++.++.+++..+
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~ 34 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALN 34 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 3678889999999999999999999999775
No 145
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=45.37 E-value=1.6e+02 Score=25.92 Aligned_cols=160 Identities=16% Similarity=0.054 Sum_probs=79.1
Q ss_pred HhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchh-hhHHHHHHhhhhhhhhcCCh-hhHHHHHHHHHHHH
Q 027558 24 QAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGAR-RASWRIISSIEQKEESRGNE-DHVSTIRDYRSKIE 101 (222)
Q Consensus 24 qaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~-R~s~R~l~~ieqk~~~~~~~-~~~~~i~~yk~kie 101 (222)
..+++++.+..+.+.... .+-+.+-...+..+|-. .+.. ..|...+....+... .+. ....+-.-|...
T Consensus 80 ~~~~~~~al~~l~~~~~~----~~~~a~~~~~lg~~~~~-~g~~~~~A~~~~~~al~~~p--~~~~a~~~lg~~~~~~-- 150 (474)
T 4abn_A 80 VQEEMEKTLQQMEEVLGS----AQVEAQALMLKGKALNV-TPDYSPEAEVLLSKAVKLEP--ELVEAWNQLGEVYWKK-- 150 (474)
T ss_dssp HHHHHHHHHHHHHHHHTT----CCCCHHHHHHHHHHHTS-SSSCCHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHhcc----CchhHHHHHHHHHHHHh-ccccHHHHHHHHHHHHhhCC--CCHHHHHHHHHHHHHc--
Confidence 345577777777776543 34556666666666654 4555 566666543322211 111 111111111111
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcch
Q 027558 102 TELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIR 181 (222)
Q Consensus 102 ~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pir 181 (222)
.--.+.+...++.|-- ++. ...+...|..|+.+.. ....++..-.+.|.+.|++|+++ .|.+|.
T Consensus 151 ----g~~~~A~~~~~~al~~---~p~--~~~~~~lg~~~~~~~~-~~~~~~~g~~~~A~~~~~~al~~-----~p~~~~- 214 (474)
T 4abn_A 151 ----GDVTSAHTCFSGALTH---CKN--KVSLQNLSMVLRQLQT-DSGDEHSRHVMDSVRQAKLAVQM-----DVLDGR- 214 (474)
T ss_dssp ----TCHHHHHHHHHHHHTT---CCC--HHHHHHHHHHHTTCCC-SCHHHHHHHHHHHHHHHHHHHHH-----CTTCHH-
T ss_pred ----CCHHHHHHHHHHHHhh---CCC--HHHHHHHHHHHHHhcc-CChhhhhhhHHHHHHHHHHHHHh-----CCCCHH-
Confidence 0111223333333211 122 2456666777665522 12222333457889999999875 455542
Q ss_pred hhhhHHHHHHHHHHh--------CChHHHHHHHHHhcC
Q 027558 182 LGLALNFSVFYYEIL--------NSPDRACNLAKQVCK 211 (222)
Q Consensus 182 LgLaLN~SVF~yEi~--------~~~~~A~~iAk~Afd 211 (222)
...|.+..|.. + |+.++|+...++|..
T Consensus 215 --~~~~lg~~~~~-~~~~~~~~~g~~~~A~~~~~~al~ 249 (474)
T 4abn_A 215 --SWYILGNAYLS-LYFNTGQNPKISQQALSAYAQAEK 249 (474)
T ss_dssp --HHHHHHHHHHH-HHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHH-HHHhhccccchHHHHHHHHHHHHH
Confidence 33444444443 3 678888887777764
No 146
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=44.95 E-value=44 Score=27.10 Aligned_cols=69 Identities=19% Similarity=0.265 Sum_probs=44.5
Q ss_pred CCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhh----hhhhcCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 027558 46 EELTVEERNLLSVAYKNVIGARRASWRIISSIEQ----KEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRL 119 (222)
Q Consensus 46 ~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yk~kie~EL~~~C~eil~lId~~L 119 (222)
|+||.|-|.=|..-.|...-.-|.+.|.+..--. +.+..+ ..-++-..+.++|+..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1dd5_A 103 PSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKIKEDQKEG-----LIPEDDAKRLENEIQKLTDEFIEKLDEVF 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999988888888888742111 101011 01134445666677777666666666544
No 147
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=44.57 E-value=27 Score=27.36 Aligned_cols=54 Identities=17% Similarity=0.071 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHH--hcCCCCCcchh-hhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 157 ESTLTAYKAAQDIAN--AELAPTHPIRL-GLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~--~~L~pt~pirL-gLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
+.|..+|.+|+++-. -.+.|.++--+ .-..|-++-+.. +|+.++|+.--++|..
T Consensus 74 ~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~-lgr~eEAl~~y~kAle 130 (159)
T 2hr2_A 74 DEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDG-LGRGAEAMPEFKKVVE 130 (159)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 468888888888732 24566554111 011344444444 7999999988777753
No 148
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=43.88 E-value=14 Score=31.40 Aligned_cols=54 Identities=19% Similarity=0.225 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHhcC-------CCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 157 ESTLTAYKAAQDIANAEL-------APTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L-------~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
+.|...|++|+++....- ...+|.+..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 164 ~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 224 (336)
T 1p5q_A 164 KQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLK-LQAFSAAIESCNKALE 224 (336)
T ss_dssp HHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 457777777776532110 00123445666777776666 5777777777776654
No 149
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=43.46 E-value=37 Score=30.47 Aligned_cols=24 Identities=13% Similarity=-0.090 Sum_probs=11.5
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHhc
Q 027558 186 LNFSVFYYEILNSPDRACNLAKQVC 210 (222)
Q Consensus 186 LN~SVF~yEi~~~~~~A~~iAk~Af 210 (222)
.|.+..|+. +|+.++|....++|.
T Consensus 78 ~~lg~~~~~-~g~~~eA~~~~~~al 101 (477)
T 1wao_1 78 YRRAASNMA-LGKFRAALRDYETVV 101 (477)
T ss_dssp HHHHHHHHH-HTCHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCHHHHHHHHHHHH
Confidence 344444433 455555555555543
No 150
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=43.21 E-value=27 Score=31.01 Aligned_cols=53 Identities=13% Similarity=0.150 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHhcCCC--------CCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 157 ESTLTAYKAAQDIANAELAP--------THPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~p--------t~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
+.|...|++|+++... .+. .+|.+..+.+|.+..|+. +++.++|+....+|+.
T Consensus 285 ~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 285 MQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 5688889998876531 110 134667788899888887 6999999998888764
No 151
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=43.13 E-value=45 Score=26.99 Aligned_cols=69 Identities=16% Similarity=0.174 Sum_probs=44.0
Q ss_pred CCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhh----hhhhcCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 027558 46 EELTVEERNLLSVAYKNVIGARRASWRIISSIEQ----KEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRL 119 (222)
Q Consensus 46 ~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yk~kie~EL~~~C~eil~lId~~L 119 (222)
|+||.|-|.=|..-.|...-.-|.+.|.+..--. +.+..+ ..-++-..+.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1ise_A 103 PPLTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKVKALLKDK-----EISEDDDRRSQDDVQKLTDAAIKKIEAAL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999988888888888742111 111011 01134445566666666666666666544
No 152
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=42.83 E-value=48 Score=26.84 Aligned_cols=69 Identities=22% Similarity=0.156 Sum_probs=44.2
Q ss_pred CCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhh----hhhhcCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 027558 46 EELTVEERNLLSVAYKNVIGARRASWRIISSIEQ----KEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRL 119 (222)
Q Consensus 46 ~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yk~kie~EL~~~C~eil~lId~~L 119 (222)
|+||.|-|.=|..-.|...-.-|-+.|.+..--. +.+..+ ..-++-..+.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1is1_A 103 PPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDK-----EISEDEDRKAQEEIQKLTDVAVKKIDEVL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999988888888888742111 111111 01134445666666666666666666544
No 153
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=42.11 E-value=67 Score=25.94 Aligned_cols=70 Identities=16% Similarity=0.155 Sum_probs=46.3
Q ss_pred CCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 027558 46 EELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRL 119 (222)
Q Consensus 46 ~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yk~kie~EL~~~C~eil~lId~~L 119 (222)
|+||.|-|.=|..-.|...-.-|.+.|.+..--...-.+. . +.-++-..+.++|+..+.+..+.-||..+
T Consensus 105 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~-~---kiseD~~k~~e~~iQkltd~~i~~id~~~ 174 (184)
T 1ge9_A 105 PPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEEL-E---GISEDEKKRALERLQKLTDKYIDEINKLM 174 (184)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-T---TCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c---CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999998888888888742111110010 0 02245556667777777777777776654
No 154
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=42.10 E-value=1.4e+02 Score=24.20 Aligned_cols=51 Identities=12% Similarity=0.140 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 156 AESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
.+.|...|++|+... .++|.++ ..+-.+|..|+.. .|+.+.|..+.+++.+
T Consensus 219 ~~~A~~~~~~al~~~--~l~p~~~--~~l~~~~~~~~~~-~g~~~~a~~~~~~a~~ 269 (308)
T 2ond_A 219 DNNTRVLFERVLTSG--SLPPEKS--GEIWARFLAFESN-IGDLASILKVEKRRFT 269 (308)
T ss_dssp HHHHHHHHHHHHHSS--SSCGGGC--HHHHHHHHHHHHH-HSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc--CCCHHHH--HHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 457889999997531 3565433 4456777788776 6999999988877754
No 155
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=42.00 E-value=45 Score=24.87 Aligned_cols=57 Identities=9% Similarity=-0.010 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHhcC--------CCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcCcc
Q 027558 156 AESTLTAYKAAQDIANAEL--------APTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCKPE 213 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L--------~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd~A 213 (222)
.+.|...|++|+++...+- ...+|-......|.+..|+. +|+.++|+...++|....
T Consensus 87 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~ 151 (213)
T 1hh8_A 87 YDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK-KEEWKKAEEQLALATSMK 151 (213)
T ss_dssp HHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH-ccCHHHHHHHHHHHHHcC
Confidence 3568888998886432100 00234444666778887776 699999999988887543
No 156
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=41.41 E-value=52 Score=26.63 Aligned_cols=69 Identities=20% Similarity=0.172 Sum_probs=43.4
Q ss_pred CCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhh----hhhhcCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 027558 46 EELTVEERNLLSVAYKNVIGARRASWRIISSIEQ----KEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRL 119 (222)
Q Consensus 46 ~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yk~kie~EL~~~C~eil~lId~~L 119 (222)
|+||.|-|.=|..-.|...-.-|.+.|.+..--. +.+..+ ..-++-..+.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1wqg_A 103 PQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEG-----EAGEDEVGRAEKDLDKTTHQYVTQIDELV 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999988888888888742111 111111 01134445566666666666666666544
No 157
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=40.90 E-value=41 Score=26.34 Aligned_cols=70 Identities=21% Similarity=0.231 Sum_probs=41.7
Q ss_pred hhccccchhhhccchhHHHHHHHHHHHHHHHHHHHHhcCCCCCc---chhhhhHHHHHHH----HHHhCChHHHHHHHHH
Q 027558 136 KGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHP---IRLGLALNFSVFY----YEILNSPDRACNLAKQ 208 (222)
Q Consensus 136 kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p---irLgLaLN~SVF~----yEi~~~~~~A~~iAk~ 208 (222)
.|..+.=+..+..+.+..+..+.|..+|++|+++ .|.++ ..||.++.---++ -+-.++.++|++.-++
T Consensus 42 ~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l-----dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~k 116 (158)
T 1zu2_A 42 WGGVLLELSQFHSISDAKQMIQEAITKFEEALLI-----DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQ 116 (158)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh-----CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHH
Confidence 3445555556666776677789999999999864 44554 3355444321111 1112577777776666
Q ss_pred hc
Q 027558 209 VC 210 (222)
Q Consensus 209 Af 210 (222)
|+
T Consensus 117 Al 118 (158)
T 1zu2_A 117 AV 118 (158)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 158
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=40.37 E-value=68 Score=20.72 Aligned_cols=28 Identities=11% Similarity=0.052 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 15 NVYMAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 15 li~~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
.+.+|....+.|+|++++..++++++.+
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~ 30 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTE 30 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 3567888889999999999999999876
No 159
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=40.19 E-value=54 Score=20.52 Aligned_cols=60 Identities=17% Similarity=0.160 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhh
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSI 77 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~i 77 (222)
.-+..++.+..+.|+|++++.++++.++.. +. +.+-...+..+|-. .+....+...+...
T Consensus 10 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~---~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~a 69 (91)
T 1na3_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELD---PN-NAEAWYNLGNAYYK-QGDYDEAIEYYQKA 69 (91)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcC---CC-CHHHHHHHHHHHHH-HhhHHHHHHHHHHH
Confidence 345678888899999999999999999875 43 34445556666543 45556666666543
No 160
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=39.91 E-value=1.1e+02 Score=22.62 Aligned_cols=57 Identities=14% Similarity=-0.026 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHH
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRII 74 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l 74 (222)
+-+..++....+.|+|++++.++++++..+ | -+.+=...+..+|-. .+....|...+
T Consensus 37 ~~~~~lg~~~~~~g~~~eA~~~~~~al~~~---P-~~~~~~~~lg~~~~~-~g~~~~Ai~~~ 93 (151)
T 3gyz_A 37 DDIYSYAYDFYNKGRIEEAEVFFRFLCIYD---F-YNVDYIMGLAAIYQI-KEQFQQAADLY 93 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---T-TCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---C-CCHHHHHHHHHHHHH-HccHHHHHHHH
Confidence 445566777777777777777777777664 3 234444555555532 33334443333
No 161
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=39.83 E-value=87 Score=21.77 Aligned_cols=59 Identities=12% Similarity=-0.009 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHh
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISS 76 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 76 (222)
+....++....+.|+|++++..+++++..+ |. +.+=...+..++-. .+....+...+..
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~---P~-~~~a~~~lg~~~~~-~g~~~~A~~~~~~ 76 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKE---PE-REEAWRSLGLTQAE-NEKDGLAIIALNH 76 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHS---TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHC---CC-CHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 467788899999999999999999999876 44 45666677777653 4555556555543
No 162
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=39.44 E-value=73 Score=20.33 Aligned_cols=27 Identities=30% Similarity=0.349 Sum_probs=14.1
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 16 VYMAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 16 i~~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
..+|.+..+.|+|++++.++++.++..
T Consensus 44 ~~~a~~~~~~~~~~~A~~~~~~a~~~~ 70 (112)
T 2kck_A 44 LMKGKALYNLERYEEAVDCYNYVINVI 70 (112)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 344555555555555555555555443
No 163
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=39.29 E-value=1.9e+02 Score=25.03 Aligned_cols=48 Identities=6% Similarity=0.045 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhc
Q 027558 14 ENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIG 65 (222)
Q Consensus 14 ~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~ 65 (222)
-+..++.+..+.|+|++++.++.++++.+ +. +..=.+-+..+|...-+
T Consensus 202 a~~~lg~~~~~~g~~~eAl~~~~~al~l~---P~-~~~a~~~lg~~l~~l~~ 249 (382)
T 2h6f_A 202 AWQHRQWVIQEFKLWDNELQYVDQLLKED---VR-NNSVWNQRYFVISNTTG 249 (382)
T ss_dssp HHHHHHHHHHHHTCCTTHHHHHHHHHHHC---TT-CHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhC---CC-CHHHHHHHHHHHHHhcC
Confidence 34566777777788888888887777765 33 34445555555555433
No 164
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=39.20 E-value=45 Score=26.99 Aligned_cols=73 Identities=21% Similarity=0.173 Sum_probs=44.9
Q ss_pred CCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 027558 46 EELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRL 119 (222)
Q Consensus 46 ~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yk~kie~EL~~~C~eil~lId~~L 119 (222)
|+||.|-|.=|..-.|...-.-|.+.|.+..--...- +........-++-..+.++|+..+.+..+.-||..+
T Consensus 104 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 176 (185)
T 1eh1_A 104 PPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKL-KKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLA 176 (185)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999988888888888742111100 000000011234455666777777777777666544
No 165
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=39.19 E-value=7.3 Score=34.56 Aligned_cols=27 Identities=22% Similarity=0.417 Sum_probs=23.9
Q ss_pred HhCChHHHHHHHHHhcCccccccCCCC
Q 027558 195 ILNSPDRACNLAKQVCKPEPKLIVPGL 221 (222)
Q Consensus 195 i~~~~~~A~~iAk~Afd~Ai~~~~~~~ 221 (222)
.+.+..+|++|++++++.+.+.++||.
T Consensus 44 ~l~~~R~Aa~I~~~v~~~~~~~ikpG~ 70 (358)
T 3fm3_A 44 ILQDARRAAEAHRRARYRVQSIVRPGI 70 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 445667999999999999999999996
No 166
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=38.56 E-value=74 Score=23.36 Aligned_cols=31 Identities=23% Similarity=0.107 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 12 REENVYMAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 12 r~~li~~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
-+-+..++.+..+.|+|++++.++.+++..+
T Consensus 108 ~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~ 138 (176)
T 2r5s_A 108 FELACELAVQYNQVGRDEEALELLWNILKVN 138 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHhC
Confidence 3456677888888888888888888888776
No 167
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=38.06 E-value=1.7e+02 Score=24.16 Aligned_cols=111 Identities=19% Similarity=0.292 Sum_probs=62.8
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChhhHHHHHHHH
Q 027558 18 MAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYR 97 (222)
Q Consensus 18 ~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yk 97 (222)
.|+|.+....|-.|++-+|.-.. +..|..|.=.-||=.+.. +|.+. + .++++..=+..-
T Consensus 100 iarllekiqkyfQ~IEtlK~ql~--------nf~e~RLiYDHYKlKvdE----------LEK~~--K-dSeKI~RNQsKL 158 (294)
T 3caz_A 100 IARLLEKIQKYRQEIEEIKKEYK--------ETDKYRERYDHYKVKLDN----------LEKKN--K-DQERIERNQQKF 158 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHH----------HHHHT--C-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh--------hhHHHHHHHHHHHHhHHH----------HHhcc--c-hHHHHHHhHHHh
Confidence 57778877788888877765321 144666766677754443 33221 1 122222222222
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q 027558 98 SKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANA 172 (222)
Q Consensus 98 ~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~ 172 (222)
.+-+.--..+|-|+|+-.++ +-|.|+|.++|..+. +=...--|-+|++.|.+
T Consensus 159 ssAEtaYkqvcsDiInkMnk-----------------ll~n~~riineaasa------vwstqlqyakaleaaan 210 (294)
T 3caz_A 159 KDAEAAYSSVCADLIQKMET-----------------VWKKHVSIFAEAASA------VWSTQLQYAKALEAAAN 210 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHG
T ss_pred hhHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHhcC
Confidence 33444556677777776654 446777888876542 22334457888887754
No 168
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=38.03 E-value=82 Score=22.81 Aligned_cols=46 Identities=13% Similarity=-0.011 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
+.|...|++|+. +.|.+|. ...|.++.++. +|+.++|+...++|..
T Consensus 38 ~~A~~~~~~al~-----~~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 38 EDAHXVFQALCV-----LDHYDSR---FFLGLGACRQA-MGQYDLAIHSYSYGAV 83 (148)
T ss_dssp HHHHHHHHHHHH-----HCTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCcccHH---HHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 457777777764 3556653 33566666665 7999999999888764
No 169
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=37.40 E-value=79 Score=29.69 Aligned_cols=74 Identities=20% Similarity=0.048 Sum_probs=46.9
Q ss_pred hhhccchhHHHHHHHHHHHHHHHHHHHHhcCCCCC-cchhhhhHHHHHHHHHHh-------------CChHHHHHHHHHh
Q 027558 144 AEFKTGAERKEAAESTLTAYKAAQDIANAELAPTH-PIRLGLALNFSVFYYEIL-------------NSPDRACNLAKQV 209 (222)
Q Consensus 144 aE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~-pirLgLaLN~SVF~yEi~-------------~~~~~A~~iAk~A 209 (222)
+|...++.-.+.+++|.++|++|++..+. +..|+ |--.-..||-| -.||.- |.-++|-.++++|
T Consensus 436 ~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k-~~~tdd~~~v~~~~~~a-k~yE~aGDyy~~AA~k~~yG~~eqAe~l~~~A 513 (526)
T 2wb7_A 436 AKGMNNENAIEYAQGAIDEYKAAINDLQK-AAQQDDYQMFLNYLNAA-KKHEMAGDYYVNAARKALNGDLEQAKIDAEKA 513 (526)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHH-HTTCCSHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHHh-hhhhhccHHHHHHHHHHhcCccHHHHHHHHHH
Confidence 45566666678899999999999999974 55444 43333333332 235554 6677777777765
Q ss_pred --cCccccccCC
Q 027558 210 --CKPEPKLIVP 219 (222)
Q Consensus 210 --fd~Ai~~~~~ 219 (222)
+.+..++-.|
T Consensus 514 ~~~~~~~~eYeP 525 (526)
T 2wb7_A 514 KEYSNLAKEYEP 525 (526)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHhHhhcCC
Confidence 4444444444
No 170
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=37.02 E-value=48 Score=21.64 Aligned_cols=29 Identities=7% Similarity=-0.006 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 14 ENVYMAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 14 ~li~~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
-+..++.+..+.|+|++++.++.+.++.+
T Consensus 40 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 68 (111)
T 2l6j_A 40 GYSNKAMALIKLGEYTQAIQMCQQGLRYT 68 (111)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 34455566666666666666666666554
No 171
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=35.42 E-value=41 Score=24.74 Aligned_cols=37 Identities=16% Similarity=0.212 Sum_probs=28.1
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhh
Q 027558 26 ERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVI 64 (222)
Q Consensus 26 eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i 64 (222)
++|+.+++.++.+-..+ ...++.+++-.|---||...
T Consensus 10 ~~F~~A~~~vk~l~~~g--~~~ps~e~~L~LYaLyKQAt 46 (106)
T 2wh5_A 10 KQFQAAVSVIQNLPKNG--SYRPSYEEMLRFYSYYKQAT 46 (106)
T ss_dssp HHHHHHHHHHHHSCSSC--SCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccC--CCCCCHHHHHHHHHHHhhhc
Confidence 56888999988765432 13689999999988888875
No 172
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=33.23 E-value=1.1e+02 Score=24.86 Aligned_cols=47 Identities=11% Similarity=0.150 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
+.|...|++|++ ++|.+|-. +-+|++.|+.. .|+.++|+.+-++|..
T Consensus 116 ~~A~~~~~~al~-----~~p~~~~~--~~~~~~~~~~~-~~~~~~A~~~~~~a~~ 162 (308)
T 2ond_A 116 EKVHSIYNRLLA-----IEDIDPTL--VYIQYMKFARR-AEGIKSGRMIFKKARE 162 (308)
T ss_dssp HHHHHHHHHHHT-----SSSSCTHH--HHHHHHHHHHH-HHCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh-----ccccCccH--HHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 455566666553 45555521 45666666655 4777777666666554
No 173
>3onj_A T-snare VTI1; helix, HABC, protein transport; 1.92A {Saccharomyces cerevisiae} PDB: 3onl_C
Probab=33.07 E-value=1.3e+02 Score=21.33 Aligned_cols=79 Identities=9% Similarity=0.141 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhh---hcCChhhHHHHHHHHHHHHHHH
Q 027558 28 YEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE---SRGNEDHVSTIRDYRSKIETEL 104 (222)
Q Consensus 28 y~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~---~~~~~~~~~~i~~yk~kie~EL 104 (222)
|.....-+...+..- +.++-++|+-.-.....-+..-..=++.+. +|-+.- ..........++.||..+.+||
T Consensus 10 f~~~~~~i~~~l~~~---~~~~ge~Rk~~i~~ie~~ldEA~ell~qMe-lE~~~~~~p~~~R~~~~~klr~Yk~dl~~~l 85 (97)
T 3onj_A 10 FKTTLEQAKASLAEA---PSQPLSQRNTTLKHVEQQQDELFDLLDQMD-VEVNNSIGDASERATYKAKLREWKKTIQSDI 85 (97)
T ss_dssp HHHHHHHHHHHHHHG---GGSCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH---hccChHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555555443 678889998887777777776554444442 222211 0011345567888988877766
Q ss_pred HHHHHH
Q 027558 105 SSICDG 110 (222)
Q Consensus 105 ~~~C~e 110 (222)
..--+.
T Consensus 86 k~~lk~ 91 (97)
T 3onj_A 86 KRPLQS 91 (97)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 544433
No 174
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=30.86 E-value=1.3e+02 Score=22.28 Aligned_cols=61 Identities=16% Similarity=0.139 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhh
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIE 78 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ie 78 (222)
.-+..+|.+..+.|+|++++.++.++++.+ +. +..=...+..+|- ..+....|...+....
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~---p~-~~~~~~~lg~~~~-~~~~~~~A~~~~~~al 149 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKID---KN-NVKALYKLGVANM-YFGFLEEAKENLYKAA 149 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS---TT-CHHHHHHHHHHHH-HHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC---cc-cHHHHHHHHHHHH-HcccHHHHHHHHHHHH
Confidence 345678888899999999999999999875 43 3455566666663 3555666666665433
No 175
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=30.22 E-value=1.2e+02 Score=20.17 Aligned_cols=26 Identities=12% Similarity=0.091 Sum_probs=12.5
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhc
Q 027558 16 VYMAKLAEQAERYEEMVEFMEKVSAS 41 (222)
Q Consensus 16 i~~AklaeqaeRy~Dm~~~mk~~i~~ 41 (222)
..+|....+.|+|++++..+++++..
T Consensus 6 ~~~a~~~~~~~~~~~A~~~~~~~~~~ 31 (129)
T 2xev_A 6 YNVAFDALKNGKYDDASQLFLSFLEL 31 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 33444444455555555555554443
No 176
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=29.77 E-value=3.4e+02 Score=25.16 Aligned_cols=152 Identities=10% Similarity=0.040 Sum_probs=0.0
Q ss_pred HhCCHHHHHHHHHHHH--------hccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChhhHHHHHH
Q 027558 24 QAERYEEMVEFMEKVS--------ASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRD 95 (222)
Q Consensus 24 qaeRy~Dm~~~mk~~i--------~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~ 95 (222)
+.++|+++++.+.+.+ +.+ ++ +.+-...+..+|-.. +....|...+....+.......-......--
T Consensus 403 ~~~~~~~A~~~~~~al~~~~~~~~~~~---p~-~~~~~~~~a~~~~~~-g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~ 477 (681)
T 2pzi_A 403 VLSQPVQTLDSLRAARHGALDADGVDF---SE-SVELPLMEVRALLDL-GDVAKATRKLDDLAERVGWRWRLVWYRAVAE 477 (681)
T ss_dssp TTCCHHHHHHHHHHHHTC-------CC---TT-CSHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHhhhhccccccccc---cc-chhHHHHHHHHHHhc-CCHHHHHHHHHHHhccCcchHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHHHHhcCC
Q 027558 96 YRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELA 175 (222)
Q Consensus 96 yk~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~ 175 (222)
+...=-++-....+..+.+--+..-.. -.....+...|+| +. .+.|++|+++
T Consensus 478 ~~~g~~~~A~~~~~~al~l~P~~~~~~----~~lg~~~~~~g~~-----------------~~-~~~~~~al~~------ 529 (681)
T 2pzi_A 478 LLTGDYDSATKHFTEVLDTFPGELAPK----LALAATAELAGNT-----------------DE-HKFYQTVWST------ 529 (681)
T ss_dssp HHHTCHHHHHHHHHHHHHHSTTCSHHH----HHHHHHHHHHTCC-----------------CT-TCHHHHHHHH------
T ss_pred HHcCCHHHHHHHHHHHHHhCCCChHHH----HHHHHHHHHcCCh-----------------HH-HHHHHHHHHh------
Q ss_pred CCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 176 PTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 176 pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
+|-......|.+..+.. +|+.++|+...++|..
T Consensus 530 --~P~~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~ 562 (681)
T 2pzi_A 530 --NDGVISAAFGLARARSA-EGDRVGAVRTLDEVPP 562 (681)
T ss_dssp --CTTCHHHHHHHHHHHHH-TTCHHHHHHHHHTSCT
T ss_pred --CCchHHHHHHHHHHHHH-cCCHHHHHHHHHhhcc
No 177
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=29.59 E-value=3e+02 Score=24.39 Aligned_cols=31 Identities=6% Similarity=-0.222 Sum_probs=26.7
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 12 REENVYMAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 12 r~~li~~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
-+-+..+|.+..+.|+|+++++++++.++.+
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 53 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLALH 53 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 3556788899999999999999999999876
No 178
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=29.30 E-value=1.6e+02 Score=21.33 Aligned_cols=165 Identities=9% Similarity=-0.083 Sum_probs=85.4
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCCh-hhH
Q 027558 12 REENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNE-DHV 90 (222)
Q Consensus 12 r~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~-~~~ 90 (222)
-.-+..++.+..+.|+|++++.++.+.++.. +. +.+-...+..+|-...+....+...+....+........ ...
T Consensus 42 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~---~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 117 (225)
T 2vq2_A 42 ELAWLVRAEIYQYLKVNDKAQESFRQALSIK---PD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANL 117 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHH
T ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHHHHhC---CC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHH
Confidence 3456678899999999999999999999875 43 344555566666543255666666665443311000000 011
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccchhHHHHHHHHHHHHHHHHHH
Q 027558 91 STIRDYR-SKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDI 169 (222)
Q Consensus 91 ~~i~~yk-~kie~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~ 169 (222)
....-|. ..--++-...+..++.+ -|.. ...+...|..|.-. | -.+.|...|+++++.
T Consensus 118 ~l~~~~~~~~~~~~A~~~~~~~~~~-----~~~~------~~~~~~la~~~~~~-----~-----~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 118 NKGICSAKQGQFGLAEAYLKRSLAA-----QPQF------PPAFKELARTKMLA-----G-----QLGDADYYFKKYQSR 176 (225)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH-----STTC------HHHHHHHHHHHHHH-----T-----CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC------chHHHHHHHHHHHc-----C-----CHHHHHHHHHHHHHh
Confidence 1111111 11112223333333332 1221 11222333332111 1 135678888888764
Q ss_pred HHhcCCC-CCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhc
Q 027558 170 ANAELAP-THPIRLGLALNFSVFYYEILNSPDRACNLAKQVC 210 (222)
Q Consensus 170 a~~~L~p-t~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Af 210 (222)
. | .+|.. ++....+|...|+.+.|....+.+.
T Consensus 177 ~-----~~~~~~~----~~~~~~~~~~~~~~~~a~~~~~~~~ 209 (225)
T 2vq2_A 177 V-----EVLQADD----LLLGWKIAKALGNAQAAYEYEAQLQ 209 (225)
T ss_dssp H-----CSCCHHH----HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred C-----CCCCHHH----HHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 3 3 44443 3344455666899999988777653
No 179
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=29.28 E-value=1.5e+02 Score=20.77 Aligned_cols=29 Identities=7% Similarity=0.061 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 14 ENVYMAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 14 ~li~~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
-+..+|....+.|+|++++.++++++..+
T Consensus 20 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~ 48 (142)
T 2xcb_A 20 QLYALGFNQYQAGKWDDAQKIFQALCMLD 48 (142)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHHhC
Confidence 34455666666677777777776666554
No 180
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=27.99 E-value=77 Score=22.01 Aligned_cols=27 Identities=19% Similarity=0.106 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 027558 14 ENVYMAKLAEQAERYEEMVEFMEKVSA 40 (222)
Q Consensus 14 ~li~~AklaeqaeRy~Dm~~~mk~~i~ 40 (222)
+++..|=-.+++|+|++++.+.++.++
T Consensus 21 ~lv~~Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 21 KYAINAVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 445555556888999999998888775
No 181
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=27.81 E-value=1.5e+02 Score=21.31 Aligned_cols=48 Identities=13% Similarity=0.180 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCCh--HHHHHHHHHhcC
Q 027558 156 AESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSP--DRACNLAKQVCK 211 (222)
Q Consensus 156 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~--~~A~~iAk~Afd 211 (222)
.+.|..+|++|+++. |.+| ....+.+..+|.-.|+. ++|+...+++..
T Consensus 60 ~~~A~~~~~~al~~~-----p~~~---~~~~~la~~l~~~~~~~~~~~A~~~~~~al~ 109 (177)
T 2e2e_A 60 YSNSLLAYRQALQLR-----GENA---ELYAALATVLYYQASQHMTAQTRAMIDKALA 109 (177)
T ss_dssp HHHHHHHHHHHHHHH-----CSCH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-----CCCH---HHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Confidence 356889999998764 3443 34566677645557887 999998887764
No 182
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=26.83 E-value=90 Score=27.86 Aligned_cols=12 Identities=17% Similarity=0.041 Sum_probs=3.6
Q ss_pred hCChHHHHHHHH
Q 027558 196 LNSPDRACNLAK 207 (222)
Q Consensus 196 ~~~~~~A~~iAk 207 (222)
.++.++|+...+
T Consensus 123 ~g~~~~A~~~~~ 134 (477)
T 1wao_1 123 QKAFERAIAGDE 134 (477)
T ss_dssp HHHHCCC-----
T ss_pred HHHHHHHhcccc
Confidence 355555555433
No 183
>2w9y_A CE-FAR-7, fatty acid/retinol binding protein protein 7, isoform A, confirmed by transcript...; lipid transport; HET: CSX; 1.80A {Caenorhabditis elegans}
Probab=26.70 E-value=97 Score=24.01 Aligned_cols=76 Identities=17% Similarity=0.173 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHHhhhccccchhhhccch--hHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 027558 101 ETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGA--ERKEAAESTLTAYKAAQDIANAELAPTH 178 (222)
Q Consensus 101 e~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~--~~~~~~~~a~~aY~~A~~~a~~~L~pt~ 178 (222)
-.+|..-...+.+.|...+ .+.++|++-|.-++.+-+---.++...|. +..++. ...+.|+.-.+-+++.|..+.
T Consensus 59 Sp~L~~K~~~l~~~lk~Ki--~~L~Peak~Fv~kli~~~r~l~~~~~~G~k~~~~~lK-~~~~~ykaLS~~aK~dL~k~F 135 (140)
T 2w9y_A 59 HPELGKRLATVLEGNKKRL--DGLSPAAVEYAKKLIHMVTTTLCSLTVGKPIDDADAK-RLHQEFQSLSSEDQAALRKNN 135 (140)
T ss_dssp CHHHHHHHHHHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCTHHHH-HHHHHHHTSCHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHH-HHHHHHHcCCHHHHHHHHHhC
Confidence 3455666667777787777 66789999999999877655555544332 122222 223667665555555454444
Q ss_pred c
Q 027558 179 P 179 (222)
Q Consensus 179 p 179 (222)
|
T Consensus 136 P 136 (140)
T 2w9y_A 136 P 136 (140)
T ss_dssp T
T ss_pred c
Confidence 4
No 184
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=26.37 E-value=20 Score=31.16 Aligned_cols=24 Identities=21% Similarity=0.447 Sum_probs=21.6
Q ss_pred ChHHHHHHHHHhcCccccccCCCC
Q 027558 198 SPDRACNLAKQVCKPEPKLIVPGL 221 (222)
Q Consensus 198 ~~~~A~~iAk~Afd~Ai~~~~~~~ 221 (222)
...+||+++.+||+.+++.++||.
T Consensus 71 ~mR~A~~i~~~a~~~~~~~ikpG~ 94 (337)
T 4fuk_A 71 RIKTVCQLSREVLDIATAAAKPGI 94 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHccCCC
Confidence 345899999999999999999996
No 185
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=25.62 E-value=26 Score=25.44 Aligned_cols=53 Identities=13% Similarity=0.284 Sum_probs=32.8
Q ss_pred hccccchhhhccchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhh----hhHHHHHHHH
Q 027558 137 GDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLG----LALNFSVFYY 193 (222)
Q Consensus 137 gDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLg----LaLN~SVF~y 193 (222)
|+..-|+-.+...-+ .-+....+..+.|++-- +..|.||..|+ +.-+|++|+-
T Consensus 12 ~~~~~~Ld~vs~~f~--~~a~~~~~~l~~Al~~L--~~~psNPa~LAe~Qa~lseynl~RN 68 (92)
T 2g0u_A 12 YEWSGYLTGIGRAFD--DGVKDLNKQLQDAQANL--TKNPSDPTALANYQMIMSEYNLYRN 68 (92)
T ss_dssp SSSTHHHHHHHGGGC--TTTHHHHHHHHHHHHHH--HHSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CcccchHHHHHHHHH--HHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 344445555543222 22445666777777543 37899999998 6678887754
No 186
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=24.08 E-value=2.3e+02 Score=21.20 Aligned_cols=59 Identities=10% Similarity=0.143 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhhchhhhHHHHHHh
Q 027558 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISS 76 (222)
Q Consensus 13 ~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 76 (222)
.-...++.+..+.|+|++++.++.+.++.+ |. +.+-...+..+|.. .+....+...+..
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~---p~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~ 101 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKN---YN-LANAYIGKSAAYRD-MKNNQEYIATLTE 101 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTT---CS-HHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhC---cc-hHHHHHHHHHHHHH-cccHHHHHHHHHH
Confidence 456678899999999999999999999876 54 34445555655543 3455555555543
No 187
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=23.93 E-value=1e+02 Score=21.24 Aligned_cols=27 Identities=15% Similarity=0.300 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 027558 14 ENVYMAKLAEQAERYEEMVEFMEKVSA 40 (222)
Q Consensus 14 ~li~~AklaeqaeRy~Dm~~~mk~~i~ 40 (222)
+++..|=-.+++|+|++++.+.++.++
T Consensus 13 ~lv~~Ave~D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 13 KYAILAVKADKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 455666666888999999988887764
No 188
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1
Probab=23.43 E-value=1.9e+02 Score=20.12 Aligned_cols=35 Identities=26% Similarity=0.292 Sum_probs=27.4
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhh
Q 027558 26 ERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVI 64 (222)
Q Consensus 26 eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i 64 (222)
++|+.+++.++.+-. . ..++.+++-.|=.-||...
T Consensus 4 ~~F~~A~~~v~~l~~-~---~~~~~~~~L~LYalyKQAt 38 (89)
T 1hbk_A 4 QVFEECVSFINGLPR-T---INLPNELKLDLYKYYKQST 38 (89)
T ss_dssp HHHHHHHHHHHHSCT-T---CCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC-c---CCCCHHHHHHHHHHHHHhh
Confidence 468888888887643 3 6789999998888888774
No 189
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=22.67 E-value=1.5e+02 Score=23.94 Aligned_cols=31 Identities=19% Similarity=0.059 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 12 REENVYMAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 12 r~~li~~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
-+-...+|.+..+.|||++++..+.+++..+
T Consensus 219 ~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~ 249 (287)
T 3qou_A 219 AALATQLALQLHQVGRNEEALELLFGHLRXD 249 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcc
Confidence 3556778888888999999999999888876
No 190
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=21.98 E-value=1.6e+02 Score=24.64 Aligned_cols=46 Identities=13% Similarity=0.055 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
+.|...|++|+++ .|.|+ ....|.+..|+. +|+.++|+...++|+.
T Consensus 247 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~a~~~-~g~~~~A~~~l~~al~ 292 (338)
T 2if4_A 247 DEAIGHCNIVLTE-----EEKNP---KALFRRGKAKAE-LGQMDSARDDFRKAQK 292 (338)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHT-TTCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 3577888888764 34443 344566666555 7999999988888764
No 191
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=21.96 E-value=2.6e+02 Score=21.04 Aligned_cols=25 Identities=12% Similarity=0.252 Sum_probs=23.3
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhcc
Q 027558 18 MAKLAEQAERYEEMVEFMEKVSASV 42 (222)
Q Consensus 18 ~AklaeqaeRy~Dm~~~mk~~i~~~ 42 (222)
++.+..+.|+|++++.++++.++.+
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~ 84 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKA 84 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHC
Confidence 7888999999999999999999887
No 192
>2qsr_A Transcription-repair coupling factor; structural genomics, PSI-2, protein ST initiative; 3.10A {Streptococcus pneumoniae}
Probab=21.40 E-value=2.2e+02 Score=22.33 Aligned_cols=57 Identities=18% Similarity=0.146 Sum_probs=43.7
Q ss_pred CCCC---CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhhh
Q 027558 4 AATP---TPSPREENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVI 64 (222)
Q Consensus 4 ~~~~---m~~~r~~li~~AklaeqaeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn~i 64 (222)
|..| ..+.++.+...=+|+ .++.-+|.-++...+++-. |+|..+-.|||.++.=...
T Consensus 17 A~IP~~YI~d~~~RL~lYkria-~~~~~eel~~l~~EL~DRF---G~lP~~v~~Ll~v~~lK~~ 76 (173)
T 2qsr_A 17 AYLPDTYISDQRHKIEIYKKIR-QIDNRVNYEELQEELIDRF---GEYPDVVAYLLEIGLVKSY 76 (173)
T ss_dssp CCCCTTTCCCHHHHHHHHHHHH-TCCSHHHHHHHHHHHHHHH---CSCCHHHHHHHHHHHHHHH
T ss_pred ccCChhhcCCHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHC---CCCcHHHHHHHHHHHHHHH
Confidence 4556 234566777777777 5788888888889999888 9999999999998854433
No 193
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=20.82 E-value=1.5e+02 Score=26.35 Aligned_cols=18 Identities=0% Similarity=-0.187 Sum_probs=0.0
Q ss_pred hCCHHHHHHHHHHHHhcc
Q 027558 25 AERYEEMVEFMEKVSASV 42 (222)
Q Consensus 25 aeRy~Dm~~~mk~~i~~~ 42 (222)
.|++++++.++++.++.+
T Consensus 2 ~g~~~~A~~~~~~al~~~ 19 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHR 19 (568)
T ss_dssp ------------------
T ss_pred CccHHHHHHHHHHHHHhC
Confidence 467888888888887665
No 194
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=20.31 E-value=1.2e+02 Score=25.33 Aligned_cols=49 Identities=18% Similarity=0.175 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCc--------------chhhhhHHHHHHHHHHhCChHHHHHHHHHhcC
Q 027558 157 ESTLTAYKAAQDIANAELAPTHP--------------IRLGLALNFSVFYYEILNSPDRACNLAKQVCK 211 (222)
Q Consensus 157 ~~a~~aY~~A~~~a~~~L~pt~p--------------irLgLaLN~SVF~yEi~~~~~~A~~iAk~Afd 211 (222)
+.|...|++|+.+. |.++ ++..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 196 ~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 196 EEAMQQYEMAIAYM-----GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-LKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHHHHS-----CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 45788888888653 2222 122467888888876 7999999999988864
No 195
>3cjl_A Domain of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Pectobacterium atrosepticum SCRI1043}
Probab=20.12 E-value=53 Score=23.49 Aligned_cols=34 Identities=21% Similarity=0.295 Sum_probs=27.9
Q ss_pred hCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhh
Q 027558 25 AERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKN 62 (222)
Q Consensus 25 aeRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLls~ayKn 62 (222)
++..||++..+.++ ... ..|+.++..-|.++.|=
T Consensus 24 ~~nhDDi~~Ive~~-~~~---~~~~~~~a~af~vGLKL 57 (88)
T 3cjl_A 24 FSLHDDLFKLLEKV-DGK---MDMTPEQTQAFMVGLKL 57 (88)
T ss_dssp EEESSCHHHHHHHH-TTT---SSSCHHHHHHHHHHHHH
T ss_pred ccChHHHHHHHHHh-hcc---CCCCHHHHHHHHHHHHH
Confidence 46789999999887 444 88999999999998774
No 196
>1tdp_A Carnobacteriocin B2 immunity protein; four-helix bundle, antimicrobial protein; NMR {Carnobacterium maltaromaticum} SCOP: a.29.8.1
Probab=20.11 E-value=2.7e+02 Score=20.69 Aligned_cols=67 Identities=16% Similarity=0.156 Sum_probs=40.2
Q ss_pred HHHHHHHHhhhhchhhhHHHHHHhhhhhhhhcCChhhHHHHHHHHHHHHH-H----HHHHHHHHHHHhhhccCCCCC-CC
Q 027558 53 RNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIET-E----LSSICDGILKLLDSRLIPCAS-SG 126 (222)
Q Consensus 53 RnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yk~kie~-E----L~~~C~eil~lId~~Lip~~~-~~ 126 (222)
-+++|+||+. ++-+.++...+.|-.+-+++.+ + ...+|.-+-..|-++++-+.. -|
T Consensus 9 ~~~lS~AY~D------------------peVk~~p~Lr~~lf~~Ak~L~~~~d~~~y~~V~~KLs~~IS~Y~l~hh~~~P 70 (111)
T 1tdp_A 9 YLNLSEAYKD------------------PEVKANEFLSKLVVQCAGKLTASNSENSYIEVISLLSRGISSYYLSHKRIIP 70 (111)
T ss_dssp HHHHHHHHTC------------------HHHHSCHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHTCTTSCCCCC
T ss_pred HHHHHHHhCC------------------HhhhcCHHHHHHHHHHHHHhccCCCcchhHhHHHHHHhHHHHHHHHhcccCc
Confidence 3577888876 2233455566666666666655 3 667777777777777766544 34
Q ss_pred c-hHHHHHHhhh
Q 027558 127 D-SKVFYLKMKG 137 (222)
Q Consensus 127 e-skvfy~Kmkg 137 (222)
+ --..|...+.
T Consensus 71 ~ali~L~~~I~k 82 (111)
T 1tdp_A 71 SSMLTIYTQIQK 82 (111)
T ss_dssp GGGTHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 3 2334455554
Done!