BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027559
(222 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356553921|ref|XP_003545299.1| PREDICTED: protein OSB1, mitochondrial-like [Glycine max]
Length = 271
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/167 (50%), Positives = 109/167 (65%), Gaps = 10/167 (5%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
+LL + ++A+L +HLK NDFI V G L S++K D NG L L YK+ V++F +V +
Sbjct: 113 LLLMMRNNVAKLASEHLKLNDFIQVLGSLGSFTKPDANGILRLNYKLEVKEFEFVAQRSG 172
Query: 118 GLAFKK--SVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKS 175
L KK SVE+ +AGM+K +NR +LW V+F+NP EWWD RK+K P PDFKHK
Sbjct: 173 YLGDKKLESVEA-----DAGMQKNQNRLHLWQVFFSNPNEWWDQRKSKRNPKQPDFKHKD 227
Query: 176 TGEALWLDPKDPPWVKKQLQRIDSMMEERGSRDLGSLSRVSTWVYDE 222
TGEALWL DPPWVK+QLQ DS + G SRV+ WVYDE
Sbjct: 228 TGEALWLSEYDPPWVKRQLQLFDSKI---AGGSAGRRSRVTNWVYDE 271
>gi|356553917|ref|XP_003545297.1| PREDICTED: protein OSB1, mitochondrial-like [Glycine max]
Length = 270
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 107/167 (64%), Gaps = 11/167 (6%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
+LL + ++A+L +HLK ND I+V G L S++K D NG L L YK+ V++F +V +
Sbjct: 113 LLLMMRNNVAKLASEHLKSNDLIHVLGSLGSFTKPDANGILRLNYKLEVKEFEFVAQSSG 172
Query: 118 GLAFKK--SVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKS 175
L KK SVE +AGM K +NR +LW V+F+NP EWWD RK+K P PDFKHK
Sbjct: 173 YLGDKKLESVE------DAGMHKNQNRLHLWQVFFSNPNEWWDQRKSKRNPKQPDFKHKD 226
Query: 176 TGEALWLDPKDPPWVKKQLQRIDSMMEERGSRDLGSLSRVSTWVYDE 222
TGEALWL DPPWVK+QLQ DS + G SRV+ WVYDE
Sbjct: 227 TGEALWLSEYDPPWVKRQLQLFDSKI---AGGSAGRRSRVTNWVYDE 270
>gi|302142377|emb|CBI19580.3| unnamed protein product [Vitis vinifera]
Length = 273
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/146 (52%), Positives = 96/146 (65%), Gaps = 1/146 (0%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
I L + MA++ KHLK ND I+V+G L Y+K D NG+L +KV+V++ NYV + GQ
Sbjct: 112 IFLQMWDRMAEISFKHLKQNDLIHVSGHLGFYTKADDNGQLRPYHKVIVKELNYVTQFGQ 171
Query: 118 GLAFKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTG 177
+KK +S GG G+ K ++R YLW V+F NP EWWDNRK K P PDF+HK TG
Sbjct: 172 PPTYKKIENLESEGG-TGLIKPKSRLYLWQVFFYNPDEWWDNRKRKKKPSQPDFEHKHTG 230
Query: 178 EALWLDPKDPPWVKKQLQRIDSMMEE 203
EALWL DP WV+KQLQ DS M E
Sbjct: 231 EALWLHKGDPVWVRKQLQLHDSRMAE 256
>gi|357437947|ref|XP_003589249.1| Protein OSB1 [Medicago truncatula]
gi|355478297|gb|AES59500.1| Protein OSB1 [Medicago truncatula]
Length = 268
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 106/166 (63%), Gaps = 11/166 (6%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
+LL + ++A++ +HLKPND I V+G L S+ +G L YK++V++ N+V +
Sbjct: 113 VLLMMWNNVAEIAYEHLKPNDLICVSGYLDSF-----DGNSDLGYKLMVKELNFV---AR 164
Query: 118 GLAFK-KSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKST 176
L ++ E K G +AG + Y N +LW V+FANP EWWD RKNKL P PDFKHK T
Sbjct: 165 SLGYEDHEKEHKFEGAKAGNQNYGNPLHLWQVFFANPNEWWDQRKNKLNPKQPDFKHKDT 224
Query: 177 GEALWLDPKDPPWVKKQLQRIDSMMEERGSRDLGSLSRVSTWVYDE 222
GEALWL +PPWV KQL+ +DS E G G SRV++WVYDE
Sbjct: 225 GEALWLSKHNPPWVTKQLKLLDSKFSEGGF--AGCRSRVTSWVYDE 268
>gi|147795684|emb|CAN72175.1| hypothetical protein VITISV_012535 [Vitis vinifera]
Length = 273
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 95/146 (65%), Gaps = 1/146 (0%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
I L + MA++ KHLK ND I+V+G L Y+K D NG+L +KV+V++ NYV + GQ
Sbjct: 112 IFLQMWDRMAEISFKHLKQNDLIHVSGHLGFYTKADDNGQLRPYHKVIVKELNYVTQFGQ 171
Query: 118 GLAFKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTG 177
+KK +S GG G+ K ++R LW V+F NP EWWDNRK K P PDF+HK TG
Sbjct: 172 PPTYKKIENLESEGG-TGLIKPKSRLXLWQVFFYNPDEWWDNRKRKKKPSQPDFEHKHTG 230
Query: 178 EALWLDPKDPPWVKKQLQRIDSMMEE 203
EALWL DP WV+KQLQ DS M E
Sbjct: 231 EALWLHKGDPVWVRKQLQLHDSRMAE 256
>gi|449470037|ref|XP_004152725.1| PREDICTED: protein OSB1, mitochondrial-like [Cucumis sativus]
Length = 263
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 97/162 (59%), Gaps = 1/162 (0%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
I L + +MA+ + LKPND++ V G L SY KV K+GK L Y++ V + N + Q
Sbjct: 100 IFLKLEKEMAESWIERLKPNDYVNVAGPLESYKKVGKSGKSYLSYQLTVSELNCIAHNDQ 159
Query: 118 GLAFKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTG 177
G + SV G Y R YLW V+F++P+EWWDNR K P PDF HKSTG
Sbjct: 160 GSKSQNSVGMLHEEGHDCRSSYRERLYLWQVFFSSPHEWWDNRNKKSNPNGPDFSHKSTG 219
Query: 178 EALWLDPKDPPWVKKQLQRIDSMMEER-GSRDLGSLSRVSTW 218
EALWL DPPW++KQL+ +D+ M+++ G L S S +S W
Sbjct: 220 EALWLRSTDPPWIRKQLELLDTQMKKKDGDGHLVSDSSMSNW 261
>gi|125587107|gb|EAZ27771.1| hypothetical protein OsJ_11719 [Oryza sativa Japonica Group]
Length = 296
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 98/166 (59%), Gaps = 5/166 (3%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
+ L + G++A + KHLK ND +YV+G L+SY KVD +G+ YK+ V D NYV + Q
Sbjct: 104 VTLNLQGELAHVSLKHLKQNDLVYVSGLLNSYHKVDPSGEKHTFYKIHVTDLNYVLDQNQ 163
Query: 118 GLAFKKSVESKSRGGEAGME-----KYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFK 172
++ KS E KY +R LW V+FA+PYEWWDNR++K Y PDFK
Sbjct: 164 RPQNDENSSDKSSMLSTTDEILTEKKYIDRLRLWQVFFASPYEWWDNRQSKPYSYYPDFK 223
Query: 173 HKSTGEALWLDPKDPPWVKKQLQRIDSMMEERGSRDLGSLSRVSTW 218
HK TGE LWL DPPWV++QL+ D + E G RD + TW
Sbjct: 224 HKDTGEKLWLRADDPPWVRRQLELQDQQLAENGHRDGSRTLKNHTW 269
>gi|125544849|gb|EAY90988.1| hypothetical protein OsI_12598 [Oryza sativa Indica Group]
Length = 296
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 98/166 (59%), Gaps = 5/166 (3%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
+ L + G++A + KHLK ND +YV+G L+SY KVD +G+ YK+ V D NYV + Q
Sbjct: 104 VTLNLQGELAHVSLKHLKQNDLVYVSGLLNSYHKVDPSGEKHTFYKIHVTDLNYVLDQNQ 163
Query: 118 GLAFKKSVESKSRGGEAGME-----KYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFK 172
++ KS E KY +R LW V+FA+PYEWWDNR++K Y PDFK
Sbjct: 164 RPQNDENSSDKSSMLSTTDEILTEKKYIDRLRLWQVFFASPYEWWDNRQSKPYSYYPDFK 223
Query: 173 HKSTGEALWLDPKDPPWVKKQLQRIDSMMEERGSRDLGSLSRVSTW 218
HK TGE LWL DPPWV++QL+ D + E G RD + TW
Sbjct: 224 HKDTGEKLWLRADDPPWVRRQLELQDQQLAENGHRDGSRTLKNHTW 269
>gi|326527599|dbj|BAK08074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 93/155 (60%), Gaps = 4/155 (2%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
+ L + GD+A +C KHLK D ++V+G L+SY KV + G+L + YK+ V++ NYV + +
Sbjct: 106 VTLQMKGDLANVCLKHLKYKDLVHVSGFLNSYHKVSETGELYVYYKIHVKELNYVYDPKK 165
Query: 118 GLAFKKSVESKSRGGEAGME----KYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKH 173
SV+ S K R LW V+FA+PYEWWDNR+ K Y G PDFKH
Sbjct: 166 ARNDNDSVDPASTPSADTQTLEETKCRERLRLWQVFFASPYEWWDNRQYKPYAGCPDFKH 225
Query: 174 KSTGEALWLDPKDPPWVKKQLQRIDSMMEERGSRD 208
K T E LWL P DPPWV KQL+ ID E G RD
Sbjct: 226 KDTREQLWLHPDDPPWVIKQLKLIDQQTAESGRRD 260
>gi|293334287|ref|NP_001168932.1| uncharacterized protein LOC100382744 [Zea mays]
gi|223973799|gb|ACN31087.1| unknown [Zea mays]
Length = 249
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 98/167 (58%), Gaps = 5/167 (2%)
Query: 57 SILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECG 116
++ L + G++A + KHLK +D +YV+G L SY KV +G+ + YK+ V + NYV +
Sbjct: 64 NVTLQLTGELANVGLKHLKHDDLVYVSGHLGSYHKVSPSGERHIVYKIYVRELNYVVDQN 123
Query: 117 ---QGLAFKKSVESKSRGGEAGMEKYE--NRFYLWHVYFANPYEWWDNRKNKLYPGAPDF 171
Q A S S + +++ E R LW V+FANPYEWWDNR++K + PDF
Sbjct: 124 KKPQNDADSTSPPSMTSVTPQMLKENECIGRLRLWQVFFANPYEWWDNRQSKTWANYPDF 183
Query: 172 KHKSTGEALWLDPKDPPWVKKQLQRIDSMMEERGSRDLGSLSRVSTW 218
KHK T E +WL P DPPWV+KQL+ D + E G R LS+ W
Sbjct: 184 KHKDTREKIWLRPDDPPWVRKQLELYDLEVAENGHRCKSRLSKKQNW 230
>gi|414871883|tpg|DAA50440.1| TPA: hypothetical protein ZEAMMB73_618566 [Zea mays]
Length = 293
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 112/210 (53%), Gaps = 8/210 (3%)
Query: 16 LLTLLGISIRLLIKLENIELNECVTMLDILLLIIHHLQCLSSI--LLAVGGDMAQLCQKH 73
L+ L +R I +E+ T L + L S+I L + G++A + KH
Sbjct: 66 LIGRLAAPVRP-IDTSFLEVPRAYTFLSVTLSSPAPSSSSSNINVTLQLNGELANVGLKH 124
Query: 74 LKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECG---QGLAFKKSVESKSR 130
LK +D +YV+G L SY KV +G+ + YK+ V + NYV + Q A S S +
Sbjct: 125 LKHDDLVYVSGHLGSYHKVSPSGERHIVYKIYVRELNYVVDQNKKPQNDADSTSPPSMTS 184
Query: 131 GGEAGMEKYE--NRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPP 188
+++ E R LW V+FANPYEWWDNR++K + PDFKHK T E +WL P DPP
Sbjct: 185 VTLQMLKENECIGRLRLWQVFFANPYEWWDNRRSKPWANYPDFKHKDTREKIWLRPDDPP 244
Query: 189 WVKKQLQRIDSMMEERGSRDLGSLSRVSTW 218
WV+KQL+ D + E G R LS+ W
Sbjct: 245 WVRKQLELYDLEVAENGHRCKSRLSKKQNW 274
>gi|297852370|ref|XP_002894066.1| organellar single-stranded [Arabidopsis lyrata subsp. lyrata]
gi|297339908|gb|EFH70325.1| organellar single-stranded [Arabidopsis lyrata subsp. lyrata]
Length = 261
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 126/228 (55%), Gaps = 18/228 (7%)
Query: 3 LFLKTKDTSM-FNLL--LTLLGISIRLLIKLENIELNECV-TMLDILLLIIHHLQCLSSI 58
LF K T + FNL+ ++L+G R + ++ N V TML + +I + I
Sbjct: 41 LFKKPLSTKLKFNLVNSVSLMGFVDRPIRVMDTGPDNFGVFTMLRVKDPLIPNRSF--RI 98
Query: 59 LLAVGGDMAQLCQKHLKPNDFIYVTGQL--HSYSKVDKNGKLCLCYKVVVEDFNYVRECG 116
L + G MA+ C +LKPND I V+G+L HS S D+N L L Y+V V + NYV
Sbjct: 99 SLTMWGTMARTCISYLKPNDHILVSGRLVSHSKSPRDENSGLDLDYQVRVTEVNYVAAPP 158
Query: 117 QGLAFKKSVESKSRGGEAGMEKYE-NRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKS 175
+ ++ E E G+E+ + ++ YLW V+F+NPY+WWDNR+NK P PDFKHK
Sbjct: 159 NLVLDSQNSEKPVSEAEDGIEESKIDKIYLWQVFFSNPYDWWDNRRNKKNPMQPDFKHKD 218
Query: 176 TGEALWLDPKDPPWVKKQLQRIDSMM----EERGSRDLGSLSRVSTWV 219
TGEALWLD P W+ ++L+ D EE+ R R+S W+
Sbjct: 219 TGEALWLDSDIPDWINRRLELFDQRNRCYDEEKTRR-----GRLSEWI 261
>gi|226507188|ref|NP_001143553.1| uncharacterized protein LOC100276246 [Zea mays]
gi|195622390|gb|ACG33025.1| hypothetical protein [Zea mays]
Length = 293
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 111/210 (52%), Gaps = 8/210 (3%)
Query: 16 LLTLLGISIRLLIKLENIELNECVTMLDILLLIIHHLQCLSSI--LLAVGGDMAQLCQKH 73
L+ L +R I +E+ T L + L S+I L + G++A + KH
Sbjct: 66 LIGRLAAPVRP-IDTSFLEVPRAYTFLSVTLSSPAPSSSSSNINVTLQLNGELANVGLKH 124
Query: 74 LKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECG---QGLAFKKSVESKSR 130
LK +D +YV+G L SY KV +G+ + YK+ V + NYV + Q A S S +
Sbjct: 125 LKHDDLVYVSGHLGSYHKVSPSGERHIVYKIYVRELNYVVDQNKKPQNDADSTSPPSMTS 184
Query: 131 GGEAGMEKYE--NRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPP 188
+++ E R LW V+FANPYEWWDNR++K PDFKHK T E +WL P DPP
Sbjct: 185 VTLQMLKENECIGRLRLWQVFFANPYEWWDNRRSKPCANYPDFKHKDTREKIWLRPDDPP 244
Query: 189 WVKKQLQRIDSMMEERGSRDLGSLSRVSTW 218
WV+KQL+ D + E G R LS+ W
Sbjct: 245 WVRKQLELYDLEVAENGHRCKSRLSKKQNW 274
>gi|255538426|ref|XP_002510278.1| conserved hypothetical protein [Ricinus communis]
gi|223550979|gb|EEF52465.1| conserved hypothetical protein [Ricinus communis]
Length = 378
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 93/165 (56%), Gaps = 18/165 (10%)
Query: 64 GDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQG----- 118
D+A+ +HLK ND IYV+G L SY DKNG L YKV V++ YV + Q
Sbjct: 123 NDVAKTGIQHLKQNDDIYVSGCLGSYEMPDKNGNLVSIYKVNVKELCYVAQHDQHSTAQK 182
Query: 119 -----------LAFKKSVESKSRGGEAG-MEKYENRFYLWHVYFANPYEWWDNRKNKLYP 166
L K S +S+ + G+ ME Y+NR LW ++F P EWWD RK+K P
Sbjct: 183 TESKACQVSDELQLKASKKSEEQSGDGNNMENYKNRLDLWQLFFCKPCEWWDKRKSKQNP 242
Query: 167 GAPDFKHKSTGEALWLDPKDPPWVKKQLQRID-SMMEERGSRDLG 210
PDFKHK GE LWL P DPPWVK+ LQ +D + ++R + +G
Sbjct: 243 ELPDFKHKYNGENLWLRPDDPPWVKRHLQLLDMEIAKQRQANGVG 287
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 84/117 (71%), Gaps = 2/117 (1%)
Query: 107 EDFNYVRECGQGLAFKKSVESKSRG-GEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLY 165
+D +V+ Q L + + + ++ G G++GM +Y NR +LW V+F+NP+EWWDNRKNK
Sbjct: 261 DDPPWVKRHLQLLDMEIAKQRQANGVGKSGMMRYSNRHHLWQVFFSNPHEWWDNRKNKTN 320
Query: 166 PGAPDFKHKSTGEALWLDPKDPPWVKKQLQRIDSMMEERGSRD-LGSLSRVSTWVYD 221
+PDFKHK TGEALW+ DPPWVK+QL+ +D +M E+ R+ +GS S++S W++D
Sbjct: 321 RRSPDFKHKDTGEALWIMRDDPPWVKRQLKLLDFIMAEQCVREKVGSGSQLSEWIFD 377
>gi|224137350|ref|XP_002327104.1| predicted protein [Populus trichocarpa]
gi|222835419|gb|EEE73854.1| predicted protein [Populus trichocarpa]
Length = 371
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 89/162 (54%), Gaps = 21/162 (12%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
IL+ +MA++C +H+KPND IYV+G L SY D+ G YK++ + Y+ + Q
Sbjct: 116 ILVETWCEMAKMCIQHVKPNDIIYVSGHLESYLSFDRTGNPSSSYKIIANELCYIAQHNQ 175
Query: 118 G--------------LAFKKSVESKSR-------GGEAGMEKYENRFYLWHVYFANPYEW 156
L FK+ S + G GMEK +N LW +F++P+EW
Sbjct: 176 RSDCQSLEEPESETCLKFKEPESSACQKYTEPYSGAGTGMEKDKNHLCLWKAFFSSPHEW 235
Query: 157 WDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRID 198
WDNRK K PDFKHK +G+ALWL P DP W+K +LQ +D
Sbjct: 236 WDNRKFKKNSKLPDFKHKISGDALWLRPDDPLWIKTKLQLLD 277
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
Query: 131 GGEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWV 190
G E+++N YLW V+FA+P+EWWDNRKNK +PDFKHK TGEALWL P DPPWV
Sbjct: 281 GEHCEEERHKNHLYLWQVFFASPHEWWDNRKNKKNSASPDFKHKDTGEALWLSPNDPPWV 340
Query: 191 KKQLQRIDSMMEERGSRDLGSLSRVSTWVYDE 222
K+Q+Q +D M + ++ G+ SRVS WVYD+
Sbjct: 341 KRQIQLLDLNMAVQ-HQERGAGSRVSHWVYDD 371
>gi|357115813|ref|XP_003559680.1| PREDICTED: protein OSB1, mitochondrial-like [Brachypodium
distachyon]
Length = 295
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 86/148 (58%), Gaps = 15/148 (10%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
+ L GD+A + K+LK +D +YV G L SY KV G+ + YK+ V++ NYV +
Sbjct: 107 VTLNFSGDLANVGLKYLKHDDLVYVYGFLSSYHKVSPRGERHIFYKIHVKELNYVLDHN- 165
Query: 118 GLAFKKSVESKSRGGEAGM----------EKYENRFYLWHVYFANPYEWWDNRKNKLYPG 167
KKS S A +KY++R LW V+FA+PYEWWDNR++K +
Sbjct: 166 ----KKSRNSDDSVDPASTPSADTQVLEEDKYKDRLRLWQVFFASPYEWWDNRQSKPHVK 221
Query: 168 APDFKHKSTGEALWLDPKDPPWVKKQLQ 195
DFKH+ T E LWL P DPPWV++QL+
Sbjct: 222 YADFKHRDTREKLWLHPDDPPWVRRQLE 249
>gi|30694139|ref|NP_175203.2| protein OSB1 [Arabidopsis thaliana]
gi|75337810|sp|Q9SX99.1|OSB1_ARATH RecName: Full=Protein OSB1, mitochondrial; AltName: Full=Organellar
single-stranded DNA-binding protein 1; Flags: Precursor
gi|5668791|gb|AAD46017.1|AC007519_2 F16N3.2 [Arabidopsis thaliana]
gi|26453224|dbj|BAC43686.1| unknown protein [Arabidopsis thaliana]
gi|28950819|gb|AAO63333.1| At1g47720 [Arabidopsis thaliana]
gi|332194083|gb|AEE32204.1| protein OSB1 [Arabidopsis thaliana]
Length = 261
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 89/158 (56%), Gaps = 7/158 (4%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKV--DKNGKLCLCYKVVVEDFNYVREC 115
I L + MA+ C HLK ND I V+G+L SYSK D L L Y+V V + NYV
Sbjct: 98 ISLRMWDAMARTCIAHLKLNDHILVSGRLESYSKSSSDVYSGLNLDYQVKVAEVNYVAAP 157
Query: 116 -GQGLAFKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHK 174
L + S K++ + E ++ YLW V+F+NPY+WWDNR+NK P PDFKHK
Sbjct: 158 PSHVLDSQISKNPKTKTEDDIEESKKDEIYLWQVFFSNPYDWWDNRRNKKNPKQPDFKHK 217
Query: 175 STGEALWLDPKDPPWVKKQLQRIDSMM----EERGSRD 208
TGEALWL P W+ ++L+ D EE+ RD
Sbjct: 218 DTGEALWLCSDLPDWITRRLELFDQKNRFYDEEKTRRD 255
>gi|224082730|ref|XP_002306816.1| predicted protein [Populus trichocarpa]
gi|222856265|gb|EEE93812.1| predicted protein [Populus trichocarpa]
Length = 292
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 88/152 (57%), Gaps = 12/152 (7%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYV-RECG 116
I L D+AQ+ +H++ IYV+G+L + S + GKL YKVVV+ N++ R
Sbjct: 121 INLTFWDDLAQVSSQHVEKGHQIYVSGRLITDSVENDEGKLQTYYKVVVQQLNFIERSSS 180
Query: 117 QGLAFKKSVESKSRGGEAG------MEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPD 170
+GL + + + G + G M E R W +FANP EWWDNRK+K P PD
Sbjct: 181 RGL-YDSDFNNTAAGSKFGNNTANDMGSMEER---WQAFFANPLEWWDNRKDKRNPKYPD 236
Query: 171 FKHKSTGEALWLDPK-DPPWVKKQLQRIDSMM 201
FKHK TGEALW++ + +PPWVK QL +D M
Sbjct: 237 FKHKDTGEALWVEGRYNPPWVKSQLAILDGQM 268
>gi|356536581|ref|XP_003536815.1| PREDICTED: protein OSB2, chloroplastic-like [Glycine max]
Length = 292
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 87/160 (54%), Gaps = 7/160 (4%)
Query: 56 SSILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVR-- 113
S I L D+A + +HL+ I+V+G+L + + + GK YKVVV+ N++
Sbjct: 117 SPINLTFWDDLAHVASQHLQKGHQIHVSGRLITDTVETEEGKSQTYYKVVVQQLNFIERN 176
Query: 114 ----ECGQGLAFKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAP 169
QG F ++ R + W+ +FANP EWWDNR NK P AP
Sbjct: 177 FSSVSSSQGQEFDFAMAGSGRKVSNAANSTGSVVETWNAFFANPGEWWDNRNNKRNPKAP 236
Query: 170 DFKHKSTGEALWLDPK-DPPWVKKQLQRIDSMMEERGSRD 208
DFKHK TGEALW++ + +PPWVK QL+ +DS M S++
Sbjct: 237 DFKHKDTGEALWIEGRYNPPWVKSQLEILDSRMGSFASQN 276
>gi|356500150|ref|XP_003518896.1| PREDICTED: protein OSB2, chloroplastic-like [Glycine max]
Length = 284
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 83/153 (54%), Gaps = 7/153 (4%)
Query: 56 SSILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVR-- 113
SSI L D+A + +HL+ I+V+G+L + + GK YKVV + N++
Sbjct: 109 SSISLTFWDDLAHVASQHLQKGYQIHVSGRLIIDTVETEEGKTQTYYKVVAQQLNFIERN 168
Query: 114 ----ECGQGLAFKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAP 169
QG F ++ R + + W+ +FANP EWWDNR NK P AP
Sbjct: 169 FSSASSSQGQEFDFAMAGGGRKVSNAVNSTGSVVESWNAFFANPGEWWDNRNNKRNPKAP 228
Query: 170 DFKHKSTGEALWLDPK-DPPWVKKQLQRIDSMM 201
DFKHK TGEALW++ + PPWVK QL+ +DS M
Sbjct: 229 DFKHKDTGEALWIEGRYSPPWVKSQLEILDSRM 261
>gi|9802592|gb|AAF99794.1|AC012463_11 T2E6.21 [Arabidopsis thaliana]
Length = 272
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 90/169 (53%), Gaps = 18/169 (10%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKV--DKNGKLCLCYKVVVEDFNYVREC 115
I L + MA+ C HLK ND I V+G+L SYSK D L L Y+V V + NYV
Sbjct: 98 ISLRMWDAMARTCIAHLKLNDHILVSGRLESYSKSSSDVYSGLNLDYQVKVAEVNYVAAP 157
Query: 116 -GQGLAFKKSVESKSRGG-----------EAGMEKYENRFYLWHVYFANPYEWWDNRKNK 163
L + S K++ G + E ++ YLW V+F+NPY+WWDNR+NK
Sbjct: 158 PSHVLDSQISKNPKTKTGYYLFYVSSSLLDDIEESKKDEIYLWQVFFSNPYDWWDNRRNK 217
Query: 164 LYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRIDSMM----EERGSRD 208
P PDFKHK TGEALWL P W+ ++L+ D EE+ RD
Sbjct: 218 KNPKQPDFKHKDTGEALWLCSDLPDWITRRLELFDQKNRFYDEEKTRRD 266
>gi|357440511|ref|XP_003590533.1| Single-stranded DNA-binding protein [Medicago truncatula]
gi|355479581|gb|AES60784.1| Single-stranded DNA-binding protein [Medicago truncatula]
Length = 291
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 88/164 (53%), Gaps = 8/164 (4%)
Query: 46 LLIIHHLQCLSSILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVV 105
L + + +S I L ++A + +H++ I+V+G+L + + +GK YKVV
Sbjct: 105 LSVKKNASQMSWIHLTFWDELAHVASQHVQKGHQIHVSGRLVTDTVDSVDGKQQTYYKVV 164
Query: 106 VEDFNY-------VRECGQGLAFKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWD 158
+ N+ VR Q F S ++ + A + LW +FANP EWWD
Sbjct: 165 AQQLNFIDRSDSPVRSHDQDFDFITSDDNGKKASYATNGMTGSVVELWQAFFANPGEWWD 224
Query: 159 NRKNKLYPGAPDFKHKSTGEALWLDPKD-PPWVKKQLQRIDSMM 201
NR+NK P APDFKHK TGEALW+D + PPWVK QL+ +D M
Sbjct: 225 NRRNKRNPKAPDFKHKDTGEALWIDGRSTPPWVKSQLEILDMRM 268
>gi|224066309|ref|XP_002302076.1| predicted protein [Populus trichocarpa]
gi|222843802|gb|EEE81349.1| predicted protein [Populus trichocarpa]
Length = 292
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
I L ++AQ+ +H++ IYV+G+L S S + +GKL YKVVV+ N++
Sbjct: 121 INLTFWDELAQVVSQHVEKGQQIYVSGRLISDSVENDDGKLQTYYKVVVQQLNFIERSSP 180
Query: 118 GLAFKKSVESKSRGGEAG------MEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDF 171
+ + + G + G M E R W +FA+P EWWDNRK+K P PDF
Sbjct: 181 TGLYDRGFNNMEAGRKFGNNTANDMGSTEER---WQAFFASPLEWWDNRKDKRNPKYPDF 237
Query: 172 KHKSTGEALWLDPK-DPPWVKKQLQRIDSMMEERGS-RDLGSLSRVSTWVYDE 222
KHK TGEALW++ + +P WVK QL +D M GS RD S R+S+ D+
Sbjct: 238 KHKDTGEALWVEGRYNPSWVKSQLAILDERM---GSLRDQDSKLRLSSMSGDD 287
>gi|297735490|emb|CBI17930.3| unnamed protein product [Vitis vinifera]
Length = 286
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 82/152 (53%), Gaps = 1/152 (0%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
I L ++A + +H++ IYV+G+L S + + GK YKVVV+ N+V
Sbjct: 119 INLTFWDELAHVASQHVEKGQQIYVSGRLVSDTVENDEGKQQTYYKVVVQQLNFVERSFS 178
Query: 118 GLAFKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTG 177
S+ + + G + LW +FANP +WWDNRK K P PDFKHK TG
Sbjct: 179 SADESNSLAAGRKLGSPATNSTGSIEELWQAFFANPVDWWDNRKTKKNPKYPDFKHKDTG 238
Query: 178 EALWLDPK-DPPWVKKQLQRIDSMMEERGSRD 208
EALW++ + +P WVK QL +DS ME +D
Sbjct: 239 EALWVEGRYNPSWVKSQLAILDSRMESFRDQD 270
>gi|359479595|ref|XP_002275197.2| PREDICTED: protein OSB2, chloroplastic [Vitis vinifera]
Length = 292
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 83/158 (52%), Gaps = 7/158 (4%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVREC-- 115
I L ++A + +H++ IYV+G+L S + + GK YKVVV+ N+V
Sbjct: 119 INLTFWDELAHVASQHVEKGQQIYVSGRLVSDTVENDEGKQQTYYKVVVQQLNFVERSFS 178
Query: 116 ----GQGLAFKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDF 171
LA S S + G + LW +FANP +WWDNRK K P PDF
Sbjct: 179 SADESNSLAAGNSTFSGRKLGSPATNSTGSIEELWQAFFANPVDWWDNRKTKKNPKYPDF 238
Query: 172 KHKSTGEALWLDPK-DPPWVKKQLQRIDSMMEERGSRD 208
KHK TGEALW++ + +P WVK QL +DS ME +D
Sbjct: 239 KHKDTGEALWVEGRYNPSWVKSQLAILDSRMESFRDQD 276
>gi|449458446|ref|XP_004146958.1| PREDICTED: protein OSB2, chloroplastic-like [Cucumis sativus]
gi|449527159|ref|XP_004170580.1| PREDICTED: protein OSB2, chloroplastic-like [Cucumis sativus]
Length = 294
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 101/190 (53%), Gaps = 8/190 (4%)
Query: 17 LTLLGISIRLLIKLENIELNECVTMLDILLLIIHHLQCLSSILLAVGGDMAQLCQKHLKP 76
+TL+G ++ L ++L+++ + V L + S I L ++A + +H++
Sbjct: 86 VTLIG-TVGLPVELKHLPSGKDVAW--TRLAVWKSSTETSWIGLTFWDELAHIASQHVQK 142
Query: 77 NDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQGLAF----KKSVESKSRGG 132
+ IYV+G+L + +GK YKVVV+ N++ S+ + + G
Sbjct: 143 GNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSNSTAPHYDQDSNSIMAGRKPG 202
Query: 133 EAGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPK-DPPWVK 191
++ + LW +FANP +WWDNRKNK P PDFKHK TGEALW++ + +PPWVK
Sbjct: 203 SGAVDNTGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVK 262
Query: 192 KQLQRIDSMM 201
QL +D M
Sbjct: 263 SQLALLDMRM 272
>gi|255559919|ref|XP_002520978.1| single-stranded DNA-binding protein, ssb, putative [Ricinus
communis]
gi|223539815|gb|EEF41395.1| single-stranded DNA-binding protein, ssb, putative [Ricinus
communis]
Length = 285
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 85/154 (55%), Gaps = 14/154 (9%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
I L D+AQ+ +H++ IYV G+L S ++ GK YKVVV+ N++
Sbjct: 113 INLTFWDDLAQIAFQHVEKGHQIYVAGRLVSDVVENEEGKQQTYYKVVVQQLNFIERSSY 172
Query: 118 GL--AFKKS-----VESKSRGGEA--GMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGA 168
+++ S + + G A G+ E LW +FANP +WWDNRKNK P
Sbjct: 173 SAPSSYRDSDGMIPIPGRKFGNNAASGLNATE----LWQAFFANPLDWWDNRKNKRNPKY 228
Query: 169 PDFKHKSTGEALWLDPK-DPPWVKKQLQRIDSMM 201
PDFKHK TGEALW++ + +PPWVK QL +D M
Sbjct: 229 PDFKHKDTGEALWVEGRYNPPWVKSQLAVLDERM 262
>gi|326489133|dbj|BAK01550.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 306
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 107/201 (53%), Gaps = 22/201 (10%)
Query: 23 SIRLLIKL-ENIELNECVTMLDIL---LLIIHHLQCLSSILLAVGGDMAQLCQKHLKPND 78
S+RL+ + +IEL + + + + + + + LA D+A + +H+K D
Sbjct: 80 SVRLIGTVGTDIELRQLPSGASVARGRIAVWKSATETTWVTLAFWDDLAVVASEHVKQGD 139
Query: 79 FIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVR---------ECGQ-GLAFKKSVESK 128
I+V+G+L S + + K + YKVVV+ FN++ E GQ G + + V +
Sbjct: 140 RIFVSGRLVSDTVDEGPEKRQVYYKVVVQQFNFIESFQPVRLYSESGQDGGKYGEYVGND 199
Query: 129 SRGGEAGMEKYE-------NRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALW 181
S G +K + + LW +FANP +WWDNRK+K P PDFKHKSTGEALW
Sbjct: 200 STSGSTENKKGDYMSSSSRSTEALWQAFFANPLDWWDNRKDKKNPRYPDFKHKSTGEALW 259
Query: 182 LDPK-DPPWVKKQLQRIDSMM 201
++ + +P WV QL +DS M
Sbjct: 260 VEGRNNPNWVVSQLAILDSRM 280
>gi|326524229|dbj|BAK00498.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 306
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 107/201 (53%), Gaps = 22/201 (10%)
Query: 23 SIRLLIKL-ENIELNECVTMLDIL---LLIIHHLQCLSSILLAVGGDMAQLCQKHLKPND 78
S+RL+ + +IEL + + + + + + + LA D+A + +H+K D
Sbjct: 80 SVRLIGTVGTDIELRQLPSGASVARGRIAVWKSATETTWVTLAFWDDLAVVASEHVKQGD 139
Query: 79 FIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVR---------ECGQ-GLAFKKSVESK 128
I+V+G+L S + + K + YKVVV+ FN++ E GQ G + + V +
Sbjct: 140 RIFVSGRLVSDTVDEGPEKRQVYYKVVVQQFNFIESFQPVRLYSESGQDGGKYGEYVGND 199
Query: 129 SRGGEAGMEKYE-------NRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALW 181
S G +K + + LW +FANP +WWDNRK+K P PDFKHKSTGEALW
Sbjct: 200 STSGSTENKKGDYMSSSSRSTEALWQAFFANPLDWWDNRKDKKNPRYPDFKHKSTGEALW 259
Query: 182 LDPK-DPPWVKKQLQRIDSMM 201
++ + +P WV QL +DS M
Sbjct: 260 VEGRNNPNWVVSQLAILDSRM 280
>gi|357121000|ref|XP_003562210.1| PREDICTED: protein OSB1, mitochondrial-like [Brachypodium
distachyon]
Length = 308
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 86/165 (52%), Gaps = 21/165 (12%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
+ LA D+A + +H+K D I+V+G+L S + + K + YKVVV+ N++
Sbjct: 118 VTLAFWDDLAVMASEHVKQGDRIFVSGRLVSDTVDEGPEKRQVYYKVVVQQLNFIESFQP 177
Query: 118 GLAFKKSVESKSRGGEAG-----------MEKYENRF---------YLWHVYFANPYEWW 157
++ ++GG+ G E F LW +FANP +WW
Sbjct: 178 VRLYESESNQNTQGGKHGYYVDNDSTSGSTENKNGDFLSSSSRSTEALWQAFFANPLDWW 237
Query: 158 DNRKNKLYPGAPDFKHKSTGEALWLDPK-DPPWVKKQLQRIDSMM 201
DNR+NK P PDFKHKSTGEALW+D + +P WV QL +DS M
Sbjct: 238 DNRQNKKNPRYPDFKHKSTGEALWVDGRNNPNWVISQLAVLDSRM 282
>gi|115454229|ref|NP_001050715.1| Os03g0633900 [Oryza sativa Japonica Group]
gi|41469492|gb|AAS07277.1| putative single-strand binding protein [Oryza sativa Japonica
Group]
gi|108709977|gb|ABF97772.1| single-strand binding protein, expressed [Oryza sativa Japonica
Group]
gi|113549186|dbj|BAF12629.1| Os03g0633900 [Oryza sativa Japonica Group]
gi|125587206|gb|EAZ27870.1| hypothetical protein OsJ_11823 [Oryza sativa Japonica Group]
gi|215686917|dbj|BAG90787.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765214|dbj|BAG86911.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 311
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 90/163 (55%), Gaps = 19/163 (11%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
+ LA D+A + +H+K D I+V+G+L S + + K + YKVVV+ FN++ Q
Sbjct: 119 VTLAFWDDLAVVASEHVKKGDRIFVSGRLVSDTVDEGPEKRQVYYKVVVQQFNFIESFQQ 178
Query: 118 GLAFKKSVESKSRGGE--------AGMEKYENRFY----------LWHVYFANPYEWWDN 159
++ + GG+ +G + ++R + LW +FANP++WWDN
Sbjct: 179 VQLYEPEAGLDTLGGKHGDYVGSTSGSSEGKSRDHVDSSSRSTEQLWQAFFANPFDWWDN 238
Query: 160 RKNKLYPGAPDFKHKSTGEALWLDPK-DPPWVKKQLQRIDSMM 201
R NK P PDFKHK TGEALW+D + +P WV QL +DS M
Sbjct: 239 RTNKKNPRYPDFKHKHTGEALWVDGRNNPNWVISQLAILDSRM 281
>gi|116783984|gb|ABK23169.1| unknown [Picea sitchensis]
Length = 390
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 88/185 (47%), Gaps = 37/185 (20%)
Query: 65 DMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECG-------- 116
++A+ +HLK ND +YV+G L + +N + YKV+ + N+V
Sbjct: 200 ELAETAAQHLKKNDKVYVSGFLALQTTAGENDQ-PKTYKVIAKTLNFVERTSPEFSQQVV 258
Query: 117 -------------------QGLAFKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWW 157
L ++KS S G+ E LW +FA+P EWW
Sbjct: 259 VNKNNPSLALYEQSVIHKDTPLQYQKSPVKSSSSGKNTQEDAATIESLWQAFFASPLEWW 318
Query: 158 DNRKNKLYPGAPDFKHKSTGEALWLDPK-DPPWVKKQLQRIDSMMEERG--------SRD 208
DNR NK P APDFKHK TGEALW+ + +P WVK QL +DS M++ G +R
Sbjct: 319 DNRNNKRNPRAPDFKHKDTGEALWIGSRYNPLWVKSQLDVLDSRMKDLGEWGGGRSSTRS 378
Query: 209 LGSLS 213
GSLS
Sbjct: 379 RGSLS 383
>gi|125544978|gb|EAY91117.1| hypothetical protein OsI_12726 [Oryza sativa Indica Group]
Length = 311
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 19/163 (11%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
+ LA D+A + +H+K D I+V+G+L S + + K + YKVVV+ FN++ Q
Sbjct: 119 VTLAFWDDLAVVASEHVKKGDRIFVSGRLVSDTVDEGPEKRQVYYKVVVQQFNFIESFQQ 178
Query: 118 GLAFKKSVESKSRGGE--------AGMEKYENRFY----------LWHVYFANPYEWWDN 159
++ + GG+ +G + ++R + LW +FANP +WWDN
Sbjct: 179 VQLYEPEAGLDTLGGKHGDYVGSTSGSSEGKSRDHVDSSSRSTEQLWQAFFANPLDWWDN 238
Query: 160 RKNKLYPGAPDFKHKSTGEALWLDPK-DPPWVKKQLQRIDSMM 201
R NK P PDFKHK TGEALW+D + +P WV QL +DS M
Sbjct: 239 RTNKKNPRYPDFKHKHTGEALWVDGRNNPNWVISQLAILDSRM 281
>gi|224063555|ref|XP_002301202.1| predicted protein [Populus trichocarpa]
gi|222842928|gb|EEE80475.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 75/138 (54%), Gaps = 8/138 (5%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
I + DMA+LC +HLKPND YV+G L SY KV G YK+ + +++ Q
Sbjct: 99 IQVETWDDMARLCFQHLKPNDHTYVSGHLESYFKVSSKGNPKSSYKLSPNEPPWIKRKVQ 158
Query: 118 GLAFKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTG 177
L +K GE E+ YLW +F + +EWWD R NK +PDFKH+ TG
Sbjct: 159 LLDWKM--------GEHCEEERHKNLYLWQGFFTSHHEWWDYRNNKKNSRSPDFKHRDTG 210
Query: 178 EALWLDPKDPPWVKKQLQ 195
EAL L+P PP V Q+Q
Sbjct: 211 EALRLNPNYPPRVNLQIQ 228
>gi|242033677|ref|XP_002464233.1| hypothetical protein SORBIDRAFT_01g014670 [Sorghum bicolor]
gi|241918087|gb|EER91231.1| hypothetical protein SORBIDRAFT_01g014670 [Sorghum bicolor]
Length = 166
Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 95 NGKLCLCYKVVVEDFNYVRECGQGLAFKKSVESKSRGGEAGMEKYEN----RFYLWHVYF 150
NG + + V + NYV + + S S + EN R LW V+F
Sbjct: 21 NGIFSISGSIFVSELNYVLDQNKPQNDSDSTSPPSMPSVTPQMQKENECIGRLRLWQVFF 80
Query: 151 ANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRIDSMMEERGSRDLG 210
ANPYEWWDNR++K +P DFKHK T E +WL P DPPWV+KQL+ D + E G R
Sbjct: 81 ANPYEWWDNRQSKPWPTYADFKHKDTREKIWLRPDDPPWVRKQLELHDLEVAENGHRGNS 140
Query: 211 SLSRVSTW 218
L + W
Sbjct: 141 RLLKSQNW 148
>gi|297722343|ref|NP_001173535.1| Os03g0611700 [Oryza sativa Japonica Group]
gi|108709798|gb|ABF97593.1| Single-strand binding protein family protein, expressed [Oryza
sativa Japonica Group]
gi|215693302|dbj|BAG88684.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255674699|dbj|BAH92263.1| Os03g0611700 [Oryza sativa Japonica Group]
Length = 141
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 55/82 (67%)
Query: 137 EKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQR 196
+KY +R LW V+FA+PYEWWDNR++K Y PDFKHK TGE LWL DPPWV++QL+
Sbjct: 33 KKYIDRLRLWQVFFASPYEWWDNRQSKPYSYYPDFKHKDTGEKLWLRADDPPWVRRQLEL 92
Query: 197 IDSMMEERGSRDLGSLSRVSTW 218
D + E G RD + TW
Sbjct: 93 QDQQLAENGHRDGSRTLKNHTW 114
>gi|194706792|gb|ACF87480.1| unknown [Zea mays]
gi|413933637|gb|AFW68188.1| single-strand binding protein [Zea mays]
Length = 300
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 83/164 (50%), Gaps = 23/164 (14%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVR---- 113
+ L D+A + +H+K D I+V+G+L S + + K + YK+ V+ N++
Sbjct: 114 VTLQFWDDLAIVASEHVKKGDRIFVSGRLVSDTVDEGPEKRHVYYKLAVQQLNFIESQPV 173
Query: 114 -----ECGQGL----------AFKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWD 158
E Q + S E K+R + E LW V+FANP +WWD
Sbjct: 174 RLYEPEASQDALGGRRADYFNSISNSTEDKNRDNMSSSRSTEE---LWQVFFANPLDWWD 230
Query: 159 NRKNKLYPGAPDFKHKSTGEALWLDPK-DPPWVKKQLQRIDSMM 201
NR NK P PDFKHK TGEALW+D + +P WV QL +DS M
Sbjct: 231 NRTNKKNPRYPDFKHKQTGEALWVDGRNNPNWVISQLAVLDSRM 274
>gi|226496844|ref|NP_001148836.1| single-strand binding protein [Zea mays]
gi|195622496|gb|ACG33078.1| single-strand binding protein [Zea mays]
Length = 300
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 83/164 (50%), Gaps = 23/164 (14%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVR---- 113
+ L D+A + +H+K D I+V+G+L S + + K + YK+ V+ N++
Sbjct: 114 VTLQFWDDLAIVASEHVKKGDRIFVSGRLVSDTVDEGPEKRHVYYKLAVQQLNFIESQPV 173
Query: 114 -----ECGQGL----------AFKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWD 158
E Q + S E K+R + E LW V+FANP +WWD
Sbjct: 174 RLYEPEASQDALGGRRADYFNSTSNSTEDKNRDNMSSSRSTEE---LWQVFFANPLDWWD 230
Query: 159 NRKNKLYPGAPDFKHKSTGEALWLDPK-DPPWVKKQLQRIDSMM 201
NR NK P PDFKHK TGEALW+D + +P WV QL +DS M
Sbjct: 231 NRTNKKNPRYPDFKHKQTGEALWVDGRNNPNWVISQLAVLDSRM 274
>gi|238013788|gb|ACR37929.1| unknown [Zea mays]
gi|414871826|tpg|DAA50383.1| TPA: single-strand binding protein [Zea mays]
Length = 302
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 79/162 (48%), Gaps = 19/162 (11%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
+ L DMA + +H+K D I+V G+L S + + K + YK+ V+ N++ E
Sbjct: 116 VTLQFWDDMAIVSSEHVKKGDRIFVAGRLVSDTVDEGPEKRHVYYKLAVQQLNFI-ESQP 174
Query: 118 GLAFKKSVESKSRGGEAG-----------------MEKYENRFYLWHVYFANPYEWWDNR 160
++ + GG M + LW +FANP +WWDNR
Sbjct: 175 VRLYESDASQDAPGGRRADYFNFTSNSTDEKNRDNMSSSRSTEELWQAFFANPLDWWDNR 234
Query: 161 KNKLYPGAPDFKHKSTGEALWLDPK-DPPWVKKQLQRIDSMM 201
NK P PDFKHK TGEALW+D + +P WV QL +DS M
Sbjct: 235 TNKKNPRYPDFKHKHTGEALWVDGRNNPNWVTSQLAVLDSRM 276
>gi|242033625|ref|XP_002464207.1| hypothetical protein SORBIDRAFT_01g014110 [Sorghum bicolor]
gi|241918061|gb|EER91205.1| hypothetical protein SORBIDRAFT_01g014110 [Sorghum bicolor]
Length = 301
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVR---- 113
+ L D+A + +H+K D I+V+G+L S + + K + YK+ V+ N++
Sbjct: 115 VTLQFWDDLAIVASEHVKKGDRIFVSGRLVSDTVDEGPEKRHVYYKLAVQQLNFIESQPV 174
Query: 114 -----ECGQGLA-------FKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRK 161
E Q F + S M + LW +FANP +WWDNR
Sbjct: 175 RLYEPEASQDAPGGRRADYFNSTSNSTEDKNRDNMSSSRSTEELWQAFFANPLDWWDNRT 234
Query: 162 NKLYPGAPDFKHKSTGEALWLDPK-DPPWVKKQLQRIDSMM 201
NK P PDFKHK TGEALW+D + +P WV QL +DS M
Sbjct: 235 NKKNPRYPDFKHKHTGEALWVDGRNNPNWVISQLAVLDSRM 275
>gi|226529435|ref|NP_001150313.1| single-strand binding protein [Zea mays]
gi|195638310|gb|ACG38623.1| single-strand binding protein [Zea mays]
Length = 301
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
+ L D+A + +H+K D I+V G+L S + + K + YK+ V+ N++ E
Sbjct: 116 VTLQFWDDLAIVASEHVKKGDRIFVAGRLVSDTVDEGPEKRHVYYKLAVQQLNFI-ESQP 174
Query: 118 GLAFKKSVESKSRGGEAG-----------------MEKYENRFYLWHVYFANPYEWWDNR 160
++ + GG M + LW FANP +WWDNR
Sbjct: 175 VRLYESDASQDAPGGRRADYFNFTSNSTDDKNRDNMSSSRSTEELWQALFANPLDWWDNR 234
Query: 161 KNKLYPGAPDFKHKSTGEALWLDPK-DPPWVKKQLQRIDSMM 201
NK P PDFKHK TGEALW+D + +P WV QL +DS M
Sbjct: 235 TNK-NPRYPDFKHKHTGEALWVDGRNNPNWVTSQLAVLDSRM 275
>gi|168045969|ref|XP_001775448.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673251|gb|EDQ59777.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 344
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 65 DMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYV---RECGQG--- 118
+A++ HLK D +YV G+L + + NG + KVV D ++V R G
Sbjct: 165 SLAEIAGHHLKKGDQVYVVGKL-TVDQFTTNGVVKKTVKVVATDVHFVEGSRASATGNAQ 223
Query: 119 -----------LAFKKSVESKSRGGEAGMEKYENRFY--LWHVYFANPYEWWDNRKNKLY 165
A +S+SR G A M N LW+ YF++P +WWDNR K
Sbjct: 224 SGRSFSSPSWTQAPPAPSQSQSRSG-ADMYAAANAETEKLWNEYFSDPNQWWDNRAKKPS 282
Query: 166 PGAPDFKHKSTGEALWL-DPKDPPWVKKQLQRIDSMMEE 203
P PDFKHKST EALW+ K P WV QL+++++ ++
Sbjct: 283 PKTPDFKHKSTNEALWIVSKKTPSWVPGQLEKLEAAKQK 321
>gi|302768735|ref|XP_002967787.1| hypothetical protein SELMODRAFT_409075 [Selaginella moellendorffii]
gi|300164525|gb|EFJ31134.1| hypothetical protein SELMODRAFT_409075 [Selaginella moellendorffii]
Length = 1477
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 71/135 (52%), Gaps = 25/135 (18%)
Query: 66 MAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQGLAFKKSV 125
++++ +H K D++ V G+L V K G + KV+V+DF +V +KS
Sbjct: 90 VSEIAVEHAKKGDWVQVQGEL----LVPKPGDKIVTPKVLVKDFKFV---------EKSN 136
Query: 126 ESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPK 185
+SK LW +FA P EWWDNR K APDFKHK T EALWL+ +
Sbjct: 137 DSKIETAR-----------LWLEFFAAPNEWWDNRAIKRNARAPDFKHKETREALWLNSQ 185
Query: 186 D-PPWVKKQLQRIDS 199
D P W+ Q+Q ++S
Sbjct: 186 DLPSWIPSQIQALES 200
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 23/123 (18%)
Query: 72 KHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQGLAFKKSVESKSRG 131
+H++ D+I V+G + ++ ++ + K+ V DF V G
Sbjct: 277 QHVRRGDWIQVSGSVSV--EMQRSAPIA---KIRVRDFQLVE-----------------G 314
Query: 132 GEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWL-DPKDPPWV 190
G + + LW +FA P+++WDNR +K PDF+HKST EALWL D ++PPWV
Sbjct: 315 DVPGRSEQDEHSRLWQNFFAAPHDYWDNRHDKENSKRPDFRHKSTKEALWLDDSRNPPWV 374
Query: 191 KKQ 193
Q
Sbjct: 375 YAQ 377
>gi|255636182|gb|ACU18433.1| unknown [Glycine max]
Length = 242
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 62/125 (49%), Gaps = 6/125 (4%)
Query: 56 SSILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVR-- 113
S I L D+A + +HL+ I+V+G+L + + + GK YKVVV+ N++
Sbjct: 117 SPINLTFWDDLAHVASQHLQKGHQIHVSGRLITDTVETEEGKSQTYYKVVVQQLNFIERN 176
Query: 114 ----ECGQGLAFKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAP 169
QG F ++ R + W+ +FANP EWWDNR NK P AP
Sbjct: 177 FSSVSSSQGQEFDFAMAGSGRKVSNAANSTGSVVETWNAFFANPGEWWDNRNNKRNPEAP 236
Query: 170 DFKHK 174
DFKHK
Sbjct: 237 DFKHK 241
>gi|116778994|gb|ABK21090.1| unknown [Picea sitchensis]
Length = 392
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 145 LWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWL-DPKDPPWVKKQLQRIDSMME 202
LW +F++P EWWDNR NK APDFKHK TGE LW+ + PPWVK QL +DS M+
Sbjct: 308 LWQEFFSSPLEWWDNRTNKKNLKAPDFKHKDTGEVLWIWNKSTPPWVKSQLAVLDSRMK 366
>gi|384248029|gb|EIE21514.1| nucleic acid-binding protein [Coccomyxa subellipsoidea C-169]
Length = 318
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 68/170 (40%), Gaps = 38/170 (22%)
Query: 60 LAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQGL 119
L V +A+ + I V G+L + + D+ G+ +K+V + N VR G
Sbjct: 136 LEVWNKLAEQAAEQFSKGSQIQVVGRLKTETWTDREGQTRKSFKIVADQVNRVRPYTMGY 195
Query: 120 AFKKSVESKSR----------------------GGE------------AGMEKYENRFYL 145
E+ S GG + M+ +
Sbjct: 196 QSSPPPEAWSPAPQQQQQPQPQAPPTPVQDDFAGGSPQPFFGEMPPPGSAMDPASQK--- 252
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKD-PPWVKKQL 194
W +FANP +WDNR NK P APDFK K ALWLD +D PPWV QL
Sbjct: 253 WADFFANPGGYWDNRFNKRNPKAPDFKAKDGDSALWLDSRDTPPWVPDQL 302
>gi|326529995|dbj|BAK08277.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 420
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 36/64 (56%)
Query: 134 AGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQ 193
A EK + W +P WWDNR +K P APDFKHK TGEALWL P+ P WV
Sbjct: 339 ASPEKQKKEAESWQNLVESPQSWWDNRVDKRSPKAPDFKHKDTGEALWLSPRTPSWVTDA 398
Query: 194 LQRI 197
L +
Sbjct: 399 LPPV 402
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 70/157 (44%), Gaps = 30/157 (19%)
Query: 65 DMAQLCQKHLKPNDFIYVTGQL--------------------HSYSKVDKNGKLCLCYKV 104
D+AQ+ HL+ ND +YV+GQL H S VD K +
Sbjct: 144 DLAQIAASHLQENDLVYVSGQLTGDVPPFKHTDGQANIQVLAHLLSFVD--SKAVETDLM 201
Query: 105 VVED--FNYVRECGQGLAFKKSVESKSRGGEAGMEKYENRF-YLWHVYFANPYEWWDNRK 161
V ED F + E + + K + +G + ++F LW+ ANP W DNR
Sbjct: 202 VDEDEGFMEIAEAEKKVEQTKPISKYPANTFSGYKAKLDKFRTLWNDVLANPLNWTDNRA 261
Query: 162 NKL----YPGAPDFKHKSTGEALWLDPKDPPWVKKQL 194
K P PDFK+K++ EALWL PP V ++L
Sbjct: 262 EKANGSKNPKYPDFKNKTSDEALWLG-SAPPHVVEKL 297
>gi|412992142|emb|CCO19855.1| single-strand binding protein [Bathycoccus prasinos]
Length = 412
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 145 LWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKD-PPWV 190
LW F P WWDNR+NK P APDFKHK TGE LWL +D PPWV
Sbjct: 291 LWRSVFDAPDRWWDNRENKRNPRAPDFKHKDTGEGLWLTGRDTPPWV 337
>gi|326506616|dbj|BAJ91349.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 420
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 35/64 (54%)
Query: 134 AGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQ 193
A EK + W +P WWDNR +K P A DFKHK TGEALWL P+ P WV
Sbjct: 339 ASPEKQKKEAESWQNLVESPQSWWDNRVDKRSPKATDFKHKDTGEALWLSPRTPSWVTDA 398
Query: 194 LQRI 197
L +
Sbjct: 399 LPPV 402
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 70/157 (44%), Gaps = 30/157 (19%)
Query: 65 DMAQLCQKHLKPNDFIYVTGQL--------------------HSYSKVDKNGKLCLCYKV 104
D+AQ+ HL+ ND +YV+GQL H S VD K +
Sbjct: 144 DLAQIAASHLQENDLVYVSGQLTGDVPPFKHTDGQANIQVLAHLLSFVD--SKAVETDLM 201
Query: 105 VVED--FNYVRECGQGLAFKKSVESKSRGGEAGMEKYENRF-YLWHVYFANPYEWWDNRK 161
V ED F + E + + K + +G + ++F LW+ ANP W DNR
Sbjct: 202 VDEDEGFMEIAEAEKKVEQTKPISKYPANTFSGYKAKLDKFRTLWNDVLANPLNWTDNRA 261
Query: 162 NKL----YPGAPDFKHKSTGEALWLDPKDPPWVKKQL 194
K P PDFK+K++ EALWL PP V ++L
Sbjct: 262 EKANGSKNPKYPDFKNKTSDEALWLG-SAPPHVVEKL 297
>gi|357126782|ref|XP_003565066.1| PREDICTED: protein OSB3, chloroplastic/mitochondrial-like
[Brachypodium distachyon]
Length = 414
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 137 EKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQR 196
EK + LW NP EWWDNR K +PDFKHK TGEALWL+ K P W L
Sbjct: 339 EKPKKEADLWQNLVDNPGEWWDNRSAKRSSKSPDFKHKETGEALWLNNKTPSWAMDAL-- 396
Query: 197 IDSMMEERGSR 207
+ RG+R
Sbjct: 397 TSAKPGSRGNR 407
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 35/169 (20%)
Query: 65 DMAQLCQKHLKPNDFIYVTGQLH----SYSKVDKNGKLCLCYKVVV--------EDFNYV 112
D+AQ+ HL+ ND +YV+GQL + D + + +++ DF
Sbjct: 144 DLAQVAASHLQENDLVYVSGQLSGDVPPFKDTDGQANIQILAQLLSFVDSKAEKTDFLVD 203
Query: 113 RECG------------QGLAFKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNR 160
E G Q + +K + G + +K LW+ +P++W D R
Sbjct: 204 EEEGFMEIAEAEKKVEQTIVTRKYPPNTVSGYKGKQDKLNT---LWNDLLVSPHDWTDCR 260
Query: 161 KNKLYPGA----PDFKHKSTGEALWLDPKDPPWVKKQLQRIDSMMEERG 205
K PDFK+ ++ E LWL+ K L+++D + RG
Sbjct: 261 DEKKNGSKKANYPDFKNNNSKEGLWLNTA----PKSVLEKLDDLAFSRG 305
>gi|224121612|ref|XP_002330744.1| predicted protein [Populus trichocarpa]
gi|222872520|gb|EEF09651.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
I + GD+A + HLK DF+Y+ GQL + + +V+V N++ Q
Sbjct: 124 IPIIFEGDLAHIAASHLKKGDFVYIDGQLSTDPPPFPEMQDQTQVQVLVNSINFIEGSFQ 183
Query: 118 GLAFKKSVESKS------RGGEAGMEKYENRFYLWHVYFANPYEWWDNRKNK----LYPG 167
KKS+ + GE+G W NP +WWD R +K + P
Sbjct: 184 ---VKKSILEQQLEVPLDDDGESGSNS-------WTDLLENPNQWWDYRSSKRSGLVKPK 233
Query: 168 APDFKHKSTGEALWLDPKDPPWVKKQLQRI 197
PDFKHK+ +++WL P W+ L+++
Sbjct: 234 HPDFKHKNNNQSVWLT-GAPSWIFSGLEKV 262
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRIDSMMEERG 205
W NP++WWDNR +K P +PDFKHK TGE LWLD P WV +L G
Sbjct: 283 WKDLVENPHKWWDNRVDKKNPKSPDFKHKETGEGLWLD-TSPAWVLPKLPPTKGAENVAG 341
Query: 206 SRDLGSL 212
+ +L
Sbjct: 342 TEGYNAL 348
>gi|18415421|ref|NP_567593.1| protein OSB2 [Arabidopsis thaliana]
gi|259517764|sp|Q8GXH3.2|OSB2_ARATH RecName: Full=Protein OSB2, chloroplastic; AltName: Full=Organellar
single-stranded DNA-binding protein 2; AltName:
Full=Protein FLORAL ABSCISSION ASSOCIATED; AltName:
Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE 9; Flags:
Precursor
gi|2827655|emb|CAA16609.1| hypothetical protein [Arabidopsis thaliana]
gi|7268796|emb|CAB79001.1| hypothetical protein [Arabidopsis thaliana]
gi|111074390|gb|ABH04568.1| At4g20010 [Arabidopsis thaliana]
gi|332658860|gb|AEE84260.1| protein OSB2 [Arabidopsis thaliana]
Length = 371
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 16/155 (10%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
I + GD+A+ +++ +D I+V+G+L S +V+V++ N+++
Sbjct: 140 IPIIFEGDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSP 199
Query: 118 GLAFKKSVESKSRGGEAGMEKYENRFYL----------WHVYFANPYEWWDNRKNK---- 163
+ V S S E+G++K R W+ NP EWWD+R+NK
Sbjct: 200 SPS-PFMVMSSSEKEESGIKKQPARAKQDIVIDEASDSWNHLIENPKEWWDHRENKVNGL 258
Query: 164 LYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRID 198
+ P PDFK K + +LWL+ K P WV +L+ ++
Sbjct: 259 VKPRHPDFKSKDSSFSLWLN-KAPNWVLPKLEGLE 292
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRIDSMME 202
W NP +WWDNR +K APDFKHK TGEALWL+ + P WV +L + E
Sbjct: 312 WKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN-ESPTWVLPKLPPVKKKQE 367
>gi|26451527|dbj|BAC42861.1| unknown protein [Arabidopsis thaliana]
Length = 371
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 16/155 (10%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
I + GD+A+ +++ +D I+V+G+L S +V+V++ N+++
Sbjct: 140 IPIIFEGDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSP 199
Query: 118 GLAFKKSVESKSRGGEAGMEKYENRFYL----------WHVYFANPYEWWDNRKNK---- 163
+ V S S E+G++K R W+ NP EWWD+R+NK
Sbjct: 200 SPS-PFMVMSSSEKEESGIKKQPARAKQDIVIDEASDSWNHLIENPKEWWDHRENKVNGL 258
Query: 164 LYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRID 198
+ P PDFK K + +LWL+ K P WV +L+ ++
Sbjct: 259 VKPRHPDFKSKDSSFSLWLN-KAPNWVLPKLEGLE 292
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRIDSMME 202
W NP +WWDNR +K APDFKHK TGEALWL+ + P WV +L + E
Sbjct: 312 WKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN-ESPTWVLPKLPPVKKKQE 367
>gi|305377020|dbj|BAJ15873.1| pentatricopeptide repeat protein [Physcomitrella patens subsp.
patens]
Length = 221
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 145 LWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPK-DPPWVKKQ 193
LW YFA P +WWDNR +K P +PD KHK TG+ALW+D P WVK Q
Sbjct: 50 LWE-YFAGPSQWWDNRIHKRNPRSPDLKHKVTGKALWIDGCFTPEWVKFQ 98
>gi|297826069|ref|XP_002880917.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297326756|gb|EFH57176.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 154
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 60/136 (44%), Gaps = 9/136 (6%)
Query: 66 MAQLCQKHLKPNDFIYVTGQLHSYSKVDKN--GKLCLCYKVVVEDFNYVREC-GQGLAFK 122
MA+ C HLK ND I V+G+L SY K N L Y V V + NYV L
Sbjct: 5 MARKCIAHLKLNDHILVSGRLASYGKRSSNVYSGLDHEYHVKVTEVNYVAAPPSHVLDSP 64
Query: 123 KSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWL 182
K+ K + + + H ++K P DFKHK TGEALWL
Sbjct: 65 KTQNRKQKNPRMKIYYCGKSLFRIHTIGGT------TGRDKKSPRQHDFKHKDTGEALWL 118
Query: 183 DPKDPPWVKKQLQRID 198
D P W+ ++L+ D
Sbjct: 119 DSDIPDWITRRLEFFD 134
>gi|297791323|ref|XP_002863546.1| hypothetical protein ARALYDRAFT_494502 [Arabidopsis lyrata subsp.
lyrata]
gi|297309381|gb|EFH39805.1| hypothetical protein ARALYDRAFT_494502 [Arabidopsis lyrata subsp.
lyrata]
Length = 441
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 13/173 (7%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
I + GD+AQ+ +H+K D I+V+G+L S +V+V++ N+V+
Sbjct: 123 IPIIFEGDLAQIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATS 182
Query: 118 -----GLAFKKSVESKSRGGEAGMEKY--ENRFYLWHVYFANPYEWWDNRKNK----LYP 166
K+ + +K R + K E W NP EW D+R NK + P
Sbjct: 183 LTKTISPPEKEVISTKKRPVRSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVKP 242
Query: 167 GAPDFKHKSTGEALWLDPKDPPWVKKQLQRID-SMMEERGSRDLGSLSRVSTW 218
G PDFK K G +LWL P W +L+ ++ ++ +G+ L L +W
Sbjct: 243 GHPDFKMKVGGLSLWLS-TAPDWALPKLKELEFDVLVPKGNIKLNQLKGEESW 294
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 33/61 (54%)
Query: 142 RFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRIDSMM 201
R W NP +WWDNR +K P APDFKHK TGE LW++ P W +L +
Sbjct: 376 REESWKNLVENPSKWWDNRLDKRNPKAPDFKHKETGEVLWINNNSPTWALSKLPPLKKNQ 435
Query: 202 E 202
E
Sbjct: 436 E 436
Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRIDSMME 202
W NP +W DNR +K PDFKHK TGEALW+ P WV +L + E
Sbjct: 294 WKDLVQNPDKWLDNRLDKTNVKYPDFKHKETGEALWMT-NSPIWVLSKLPPLKKNQE 349
>gi|79325179|ref|NP_001031674.1| protein OSB2 [Arabidopsis thaliana]
gi|332658861|gb|AEE84261.1| protein OSB2 [Arabidopsis thaliana]
Length = 371
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 16/155 (10%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
I + GD+A+ +++ +D I+V+G+L S +V+V++ N+++
Sbjct: 140 IPIIFEGDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSP 199
Query: 118 GLAFKKSVESKSRGGEAGMEKY----------ENRFYLWHVYFANPYEWWDNRKNK---- 163
+ V S S E+G++K + W+ NP EWWD+R+NK
Sbjct: 200 SPS-PFMVMSSSEKEESGIKKQPGIAKQDIVIDEASDSWNHLIENPKEWWDHRENKVNGL 258
Query: 164 LYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRID 198
+ P PDFK K + +LWL+ K P WV +L+ ++
Sbjct: 259 VKPRHPDFKSKDSSFSLWLN-KAPNWVLPKLEGLE 292
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLD-------PKDPPWVKKQ 193
W NP +WWDNR +K APDFKHK TGEALWL+ PK PP KKQ
Sbjct: 312 WKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNESPTWVLPKLPPVKKKQ 366
>gi|242059899|ref|XP_002459095.1| hypothetical protein SORBIDRAFT_03g045740 [Sorghum bicolor]
gi|241931070|gb|EES04215.1| hypothetical protein SORBIDRAFT_03g045740 [Sorghum bicolor]
Length = 383
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 145 LWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRIDSMMEER 204
LW NP WWDNR +K P PDFK+K++G+ LWL K P W + L + +
Sbjct: 315 LWRDLVDNPANWWDNRTDKPTPKHPDFKNKNSGQGLWLGTKSPQWARDALPSLKFKGGSK 374
Query: 205 GSR 207
G+R
Sbjct: 375 GTR 377
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 107 EDFNYVRECGQGLAFKKSVESKSRGGEAGMEKYENRF-YLWHVYFANPYEWWDNRKNK-- 163
E F + E + + K+ G +G ++ LW+ ++P +W DNR K
Sbjct: 172 EGFIEIVEAEKKVEAKRPTSKFPPGTVSGYRNKADKINKLWNDVISHPQDWIDNRPQKKN 231
Query: 164 --LYPGAPDFKHKSTGEALWLD 183
P PDFK K + EALWLD
Sbjct: 232 GLRSPKYPDFKSKVSDEALWLD 253
>gi|297804136|ref|XP_002869952.1| hypothetical protein ARALYDRAFT_492872 [Arabidopsis lyrata subsp.
lyrata]
gi|297315788|gb|EFH46211.1| hypothetical protein ARALYDRAFT_492872 [Arabidopsis lyrata subsp.
lyrata]
Length = 365
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
I + GD+A+ +++ +D I+V+G+L S +V+V++ N+++
Sbjct: 135 IPIIFEGDLAKTAAQNINKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSP 194
Query: 118 GLAFKKSVESKSRGGEAGMEKY----------ENRFYLWHVYFANPYEWWDNRKNK---- 163
+ V S S E+G++K + W+ NP EWWD+R+NK
Sbjct: 195 SPS-PLMVMSSSEKEESGIKKQPGIAKKDIVIDEASDSWNHLIENPKEWWDHRENKVNGL 253
Query: 164 LYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQ 195
+ P PDFK K + +LWL+ K P WV +L+
Sbjct: 254 VKPRHPDFKSKDSSLSLWLN-KAPNWVLPKLE 284
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRIDSMME 202
W NP +WWDNR +K APDFKHK TGEALWL+ + P WV +L + E
Sbjct: 307 WKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN-ESPTWVLPKLPPVKKKQE 362
>gi|308799583|ref|XP_003074572.1| Single-strand binding protein (ISS) [Ostreococcus tauri]
gi|116000743|emb|CAL50423.1| Single-strand binding protein (ISS) [Ostreococcus tauri]
Length = 380
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Query: 145 LWHVYFANPYEWWDNRKNKLYPGA----PDFKHKSTGEALWLDPKD-PPWV 190
LW +P WWDNR+ K PG+ PDFKHK +GEALW++ +D P WV
Sbjct: 254 LWRSLAEDPDTWWDNRERKSQPGSNPRQPDFKHKESGEALWIESRDTPAWV 304
>gi|357501319|ref|XP_003620948.1| Protein OSB3 [Medicago truncatula]
gi|355495963|gb|AES77166.1| Protein OSB3 [Medicago truncatula]
Length = 491
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 124 SVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLD 183
SV+SK G ++ W+ NP +WWDNR +K P PDFKHK TGEALWL
Sbjct: 409 SVKSKQAKDSKGSDES------WNDLLQNPAKWWDNRLDKKNPKGPDFKHKDTGEALWLR 462
Query: 184 PKDPPWV 190
P WV
Sbjct: 463 -GSPSWV 468
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRID 198
W+ NP +WWDNR +K Y APDFKHK TG LWL P WV +L+ ++
Sbjct: 353 WNDLLQNPAKWWDNRVDKKYARAPDFKHKDTGVGLWLR-DSPSWVSSRLKELE 404
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 18/138 (13%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYS---KVDKNGKLCLCYKV----VVEDFN 110
I L GD+A Q HLK ND ++V GQL + K+DK + KV VE +
Sbjct: 119 IPLVFHGDLALTAQFHLKLNDVVHVEGQLSTEDDQIKLDKPQQYQFQVKVQSLNFVEGYP 178
Query: 111 YVRECGQGLAFKKSVESKSRGGE----------AGMEKYENRFYLWHVYFANPYEWWDNR 160
V++ K +E +S E E+++ R W P +W
Sbjct: 179 RVKKASLTSKEKSDIEDESENDEIKSSEKDIHSEKTEQHDTR-KSWRDVINKPSQWKAVH 237
Query: 161 KNKLYPGAPDFKHKSTGE 178
K P DF+ K+ GE
Sbjct: 238 SPKESPKNADFESKTEGE 255
>gi|297735427|emb|CBI17867.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRI 197
W NP +WWDNR +K APDFKHK TGEALWL P WV +L I
Sbjct: 145 WKNLVENPDKWWDNRSSKTKEKAPDFKHKDTGEALWLS-SSPAWVLSKLPPI 195
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 92 VDKNGKLCLCYKVVVEDFNYVRECGQGLAFKKSVESKSR-GGEAGMEKY-ENRFYLWHVY 149
V N L V+V N+V E GQ A + + S+ G + ++K ++ LW
Sbjct: 16 VGSNADFSLV--VMVHTVNFVMESGQKFAHQNEEKPASKHSGNSSLKKGGDSGLSLWRDL 73
Query: 150 FANPYEWWDNRKNKL----YPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRID 198
NP +W DNR++KL P PDFK K G LWLD P WV +L+ ++
Sbjct: 74 IMNPKQWRDNRQDKLNGSVKPKFPDFKRKDDGVPLWLDSA-PEWVSSKLEGLE 125
>gi|21537140|gb|AAM61481.1| unknown [Arabidopsis thaliana]
Length = 440
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 142 RFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRIDSMM 201
R +W NP +WWDNR +K P PDFKHK TGEALW+ P W +L +
Sbjct: 376 REEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIG-DSPTWALSKLPPLKKNQ 434
Query: 202 E 202
E
Sbjct: 435 E 435
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 13/173 (7%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
I + GD+A++ +H+K D I+V+G+L S +V+V++ N+V+
Sbjct: 123 IPIIFEGDLAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATS 182
Query: 118 GL----AFKKSVES-KSRGGEAGMEKY--ENRFYLWHVYFANPYEWWDNRKNK----LYP 166
+K V S K + + K E W NP EW D+R NK + P
Sbjct: 183 TTKTISPPEKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVKP 242
Query: 167 GAPDFKHKSTGEALWLDPKDPPWVKKQLQRID-SMMEERGSRDLGSLSRVSTW 218
G PDFK K G +LWL P W +L+ + ++ +G+ L L +W
Sbjct: 243 GHPDFKMKVGGLSLWLS-TAPDWALLKLEELKFDVLVPKGNIKLNQLKGEESW 294
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRIDSMME 202
W NP +W DNR +K PDFKHK TGEALW+ P WV +L + E
Sbjct: 294 WKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWMT-NSPIWVLSKLPPLKKNQE 349
>gi|42573577|ref|NP_974885.1| protein OSB3 [Arabidopsis thaliana]
gi|332007778|gb|AED95161.1| protein OSB3 [Arabidopsis thaliana]
Length = 442
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 142 RFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRIDSMM 201
R +W NP +WWDNR +K P PDFKHK TGEALW+ P W +L +
Sbjct: 378 REEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIG-DSPTWALSKLPPLKKNQ 436
Query: 202 E 202
E
Sbjct: 437 E 437
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
I + GD+A++ +H+K D I+V+G+L S +V+V++ N+V+
Sbjct: 123 IPIIFEGDLAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATS 182
Query: 118 GL----AFKKSVES-KSRGGEAGMEKY--ENRFYLWHVYFANPYEWWDNRKNK----LYP 166
+K V S K + + K E W NP EW D+R NK + P
Sbjct: 183 TTKTISPPEKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVKP 242
Query: 167 GAPDFKHKSTGEALWL 182
G PDFK K G +LWL
Sbjct: 243 GHPDFKMKVGGLSLWL 258
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRIDSMME 202
W NP +W DNR +K PDFKHK TGEALW+ P WV +L + E
Sbjct: 296 WKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWMT-NSPIWVLSKLPPLKKNQE 351
>gi|18422482|ref|NP_568639.1| protein OSB3 [Arabidopsis thaliana]
gi|75328911|sp|Q8GWJ4.1|OSB3_ARATH RecName: Full=Protein OSB3, chloroplastic/mitochondrial; AltName:
Full=Organellar single-stranded DNA-binding protein 3;
Flags: Precursor
gi|26452626|dbj|BAC43396.1| unknown protein [Arabidopsis thaliana]
gi|28973013|gb|AAO63831.1| unknown protein [Arabidopsis thaliana]
gi|30102734|gb|AAP21285.1| At5g44785 [Arabidopsis thaliana]
gi|110743279|dbj|BAE99530.1| hypothetical protein [Arabidopsis thaliana]
gi|332007779|gb|AED95162.1| protein OSB3 [Arabidopsis thaliana]
Length = 440
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 142 RFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRIDSMM 201
R +W NP +WWDNR +K P PDFKHK TGEALW+ P W +L +
Sbjct: 376 REEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIG-DSPTWALSKLPPLKKNQ 434
Query: 202 E 202
E
Sbjct: 435 E 435
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 13/173 (7%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
I + GD+A++ +H+K D I+V+G+L S +V+V++ N+V+
Sbjct: 123 IPIIFEGDLAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATS 182
Query: 118 GL----AFKKSVES-KSRGGEAGMEKY--ENRFYLWHVYFANPYEWWDNRKNK----LYP 166
+K V S K + + K E W NP EW D+R NK + P
Sbjct: 183 TTKTISPPEKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVKP 242
Query: 167 GAPDFKHKSTGEALWLDPKDPPWVKKQLQRID-SMMEERGSRDLGSLSRVSTW 218
G PDFK K G +LWL P W +L+ + ++ +G+ L L +W
Sbjct: 243 GHPDFKMKVGGLSLWLS-TAPDWALLKLEELKFDVLVPKGNIKLNQLKGEESW 294
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRIDSMME 202
W NP +W DNR +K PDFKHK TGEALW+ P WV +L + E
Sbjct: 294 WKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWMT-NSPIWVLSKLPPLKKNQE 349
>gi|37700323|gb|AAR00613.1| unknown protein [Oryza sativa Japonica Group]
gi|108709797|gb|ABF97592.1| Single-strand binding protein family protein, expressed [Oryza
sativa Japonica Group]
Length = 183
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
+ L + G++A + KHLK ND +YV+G L+SY KVD +G+ YK+ V D NYV + Q
Sbjct: 104 VTLNLQGELAHVSLKHLKQNDLVYVSGLLNSYHKVDPSGEKHTFYKIHVTDLNYVLDQNQ 163
>gi|2660671|gb|AAC79142.1| hypothetical protein [Arabidopsis thaliana]
Length = 395
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 13/173 (7%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
I + GD+A++ +H+K D I+V+G+L S +V+V++ N+V+
Sbjct: 123 IPIIFEGDLAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATS 182
Query: 118 GL----AFKKSVES-KSRGGEAGMEKY--ENRFYLWHVYFANPYEWWDNRKNK----LYP 166
+K V S K + + K E W NP EW D+R NK + P
Sbjct: 183 TTKTISPPEKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVKP 242
Query: 167 GAPDFKHKSTGEALWLDPKDPPWVKKQLQRID-SMMEERGSRDLGSLSRVSTW 218
G PDFK K G +LWL P W +L+ + ++ +G+ L L +W
Sbjct: 243 GHPDFKMKVGGLSLWLS-TAPDWALLKLEELKFDVLVPKGNIKLNQLKGEESW 294
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRIDSMME 202
W NP +W DNR +K PDFKHK TGEALW+ P WV +L + E
Sbjct: 294 WKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWMT-NSPIWVLSKLPPLKKNQE 349
>gi|359485032|ref|XP_003633203.1| PREDICTED: protein OSB2, chloroplastic-like [Vitis vinifera]
Length = 137
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRI 197
W NP +WWDNR +K APDFKHK TGEALWL P WV +L I
Sbjct: 71 WKNLVENPDKWWDNRSSKTKEKAPDFKHKDTGEALWLS-SSPAWVLSKLPPI 121
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Query: 152 NPYEWWDNRKNKL----YPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRID 198
NP +W DNR++KL P PDFK K G LWLD P WV +L+ ++
Sbjct: 2 NPKQWRDNRQDKLNGSVKPKFPDFKRKDDGVPLWLD-SAPEWVSSKLEGLE 51
>gi|60685032|gb|AAX34397.1| mitochondrial SBP40 [Solanum tuberosum]
Length = 387
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQL 194
W NP +WWDNR +KL APDFKHK+TG LW+ P WV QL
Sbjct: 327 WKDLLENPDKWWDNRASKLNQKAPDFKHKNTGIGLWVG-SSPDWVLSQL 374
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 80/194 (41%), Gaps = 43/194 (22%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYS-KVDKNGKLCLCYKVVVEDFNYVRECG 116
I + GD+A + H+K ND +YV G+ + + C+ +V E+ N+V+
Sbjct: 130 IPVVFAGDLAHVVACHVKENDCVYVYGKFSMEPLSCEFMDEYQSCFHIVAENVNFVQGLK 189
Query: 117 QGLAFKKSVES----------------------KSRGGEAGMEKYENRFYLWHV------ 148
+ ++ K +V+S K + +G+E Y++ L
Sbjct: 190 RNVSLKGNVKSVYPKGKNFVLDENDNQHSDYLVKQKDRLSGLE-YDDSVNLGESKSEEGV 248
Query: 149 --------YFANPYEWWDNRKNKL----YPGAPDFKHKSTGEALWLDPKDPPWVKKQLQR 196
NP +WWD RK KL PDFK K + +LW++ P WV + L+
Sbjct: 249 TGGDDRRDLIKNPKQWWDCRKAKLDGIVKARHPDFKKKDSSTSLWIE-NTPRWVLEGLEG 307
Query: 197 IDSMMEERGSRDLG 210
++ S+ +G
Sbjct: 308 LEFDAYAPKSKSIG 321
>gi|226508264|ref|NP_001145065.1| uncharacterized protein LOC100278261 [Zea mays]
gi|195650571|gb|ACG44753.1| hypothetical protein [Zea mays]
Length = 110
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%)
Query: 145 LWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRIDSMMEER 204
LW NP WWDNR +K PDFK+K +G+ALW+ K P W L ++ +
Sbjct: 42 LWRDLVNNPANWWDNRSDKPTLKHPDFKNKDSGQALWIGTKSPRWAVDALPSLNFKGGSK 101
Query: 205 GSR 207
G+R
Sbjct: 102 GTR 104
>gi|57900457|dbj|BAD87869.1| unknown protein [Oryza sativa Japonica Group]
Length = 395
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 61/150 (40%), Gaps = 24/150 (16%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDK------------------NGKLC 99
I + D+AQ+ HL+ D IYV+GQL K GK
Sbjct: 124 IPIIFQDDLAQVAASHLQEKDHIYVSGQLTGDIPPTKLMDGQANIQVLAQMLSFVGGKAV 183
Query: 100 LCYKVVVED--FNYVRECGQGLAFKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWW 157
+V E+ F + E + + KK + +G + LW+ ANP +W
Sbjct: 184 QADSMVDEEEGFMQIVEAEKKVETKKFIPKYPPRTVSGYRNKDKLNKLWNDVVANPQDWT 243
Query: 158 DNRKNK----LYPGAPDFKHKSTGEALWLD 183
DNR K + PDFK+ + EALWLD
Sbjct: 244 DNRPQKKNGSINAKYPDFKNNVSKEALWLD 273
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 145 LWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRIDSMMEER 204
LW NP +WWDNR +K PDFKHK G LW+ + P W ID++ +
Sbjct: 329 LWQDLVDNPGKWWDNRSDKPSIKYPDFKHKENGTPLWIGSQTPKWA------IDALPPAK 382
Query: 205 GSR 207
S+
Sbjct: 383 PSK 385
>gi|223942215|gb|ACN25191.1| unknown [Zea mays]
gi|414871884|tpg|DAA50441.1| TPA: hypothetical protein ZEAMMB73_618566 [Zea mays]
Length = 193
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 57 SILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYV 112
++ L + G++A + KHLK +D +YV+G L SY KV +G+ + YK+ V + NYV
Sbjct: 108 NVTLQLNGELANVGLKHLKHDDLVYVSGHLGSYHKVSPSGERHIVYKIYVRELNYV 163
>gi|297598325|ref|NP_001045397.2| Os01g0949200 [Oryza sativa Japonica Group]
gi|57900456|dbj|BAD87868.1| unknown protein [Oryza sativa Japonica Group]
gi|255674072|dbj|BAF07311.2| Os01g0949200 [Oryza sativa Japonica Group]
Length = 309
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 59/143 (41%), Gaps = 24/143 (16%)
Query: 65 DMAQLCQKHLKPNDFIYVTGQLHSYSKVDK------------------NGKLCLCYKVVV 106
D+AQ+ HL+ D IYV+GQL K GK +V
Sbjct: 45 DLAQVAASHLQEKDHIYVSGQLTGDIPPTKLMDGQANIQVLAQMLSFVGGKAVQADSMVD 104
Query: 107 ED--FNYVRECGQGLAFKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRKNK- 163
E+ F + E + + KK + +G + LW+ ANP +W DNR K
Sbjct: 105 EEEGFMQIVEAEKKVETKKFIPKYPPRTVSGYRNKDKLNKLWNDVVANPQDWTDNRPQKK 164
Query: 164 ---LYPGAPDFKHKSTGEALWLD 183
+ PDFK+ + EALWLD
Sbjct: 165 NGSINAKYPDFKNNVSKEALWLD 187
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 145 LWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRIDSMMEER 204
LW NP +WWDNR +K PDFKHK G LW+ + P W ID++ +
Sbjct: 243 LWQDLVDNPGKWWDNRSDKPSIKYPDFKHKENGTPLWIGSQTPKWA------IDALPPAK 296
Query: 205 GSR 207
S+
Sbjct: 297 PSK 299
>gi|307102634|gb|EFN50904.1| hypothetical protein CHLNCDRAFT_55453 [Chlorella variabilis]
Length = 293
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 23/152 (15%)
Query: 64 GDMAQLCQKHLKPNDFIYVTGQLHSYSKVDK-----NGKLCLCYKVVVEDFNYVR----- 113
G +A+ + L+ D + V G+L KVDK G+ +K+V + VR
Sbjct: 148 GPLAERADQQLQKGDRVAVQGRL----KVDKWEDRATGQKRTAFKLVATSISRVRSTFPP 203
Query: 114 -ECGQGLAFKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFK 172
E G + + + A + W P WWDNR K P APDFK
Sbjct: 204 REPGHLGDPAGAGGPQQQQPAAAAAAGQAGPAPWD----EPPLWWDNRVGKRNPKAPDFK 259
Query: 173 HKSTGE---ALWLDPKDPP-WVKKQLQRIDSM 200
K G ALW++ ++ P WVK +L+R+D++
Sbjct: 260 KKVGGSDAPALWVEGRNTPGWVKAELERLDAL 291
>gi|297851580|ref|XP_002893671.1| single-stranded DNA binding protein [Arabidopsis lyrata subsp.
lyrata]
gi|297339513|gb|EFH69930.1| single-stranded DNA binding protein [Arabidopsis lyrata subsp.
lyrata]
Length = 357
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQL 194
W N +WWDNR +K +P APDFKHK TG LWL P WV ++L
Sbjct: 293 WKDLVENMNKWWDNRLDKRHPKAPDFKHKETGVGLWLS-DSPSWVLEKL 340
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 60/146 (41%), Gaps = 33/146 (22%)
Query: 64 GDMAQLCQKHLKPNDFIYVTGQ-----LHSYSKVD-------KNGKLCLCYKVVVEDFNY 111
GD+A +LK ND +++TGQ + S + D K+ ++V+V D +Y
Sbjct: 124 GDLAHTANSYLKKNDRVHITGQILGDVIQSGANSDQACVQLFKSFHGSFSHQVMVRDLHY 183
Query: 112 VR----------ECGQGLAFKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRK 161
+ Q K S RG + G LW P EW D R+
Sbjct: 184 IEGSKALPKVMPTVNQNEGVLKHSASVQRGRDVGTN-------LWFDLVDKPDEWCDYRE 236
Query: 162 NK----LYPGAPDFKHKSTGEALWLD 183
+K + P PDFK K +ALWL+
Sbjct: 237 SKQNGSVNPKHPDFKKKDGSQALWLN 262
>gi|302843830|ref|XP_002953456.1| hypothetical protein VOLCADRAFT_82305 [Volvox carteri f.
nagariensis]
gi|300261215|gb|EFJ45429.1| hypothetical protein VOLCADRAFT_82305 [Volvox carteri f.
nagariensis]
Length = 413
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGE-ALWLDPKDPP-WVKKQLQRIDSMM-- 201
W ANP EW+DNRK K P APDF K A+W+D +D P W ++ L +DS
Sbjct: 44 WDALRANPNEWYDNRKRKTNPKAPDFVRKDDRSVAIWIDGRDTPGWYEEFLDELDSRQGG 103
Query: 202 EERGSR 207
++RG R
Sbjct: 104 QQRGDR 109
Score = 40.4 bits (93), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKST-GEALWLDP-KDPPWVKKQLQRIDS 199
W NP EW+DNR K P APDF+ K ALW+D P W+ L +D+
Sbjct: 130 WESLRNNPEEWFDNRSRKTNPRAPDFRRKDDRAVALWIDSYGAPEWLDDLLHELDA 185
Score = 40.4 bits (93), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGE-ALWLDPKDPP-WVKKQLQRIDSMMEE 203
W NP +W+DNR K P APDF++K LWL + P W+ + L +D+ ++
Sbjct: 335 WESLRNNPEQWFDNRYTKQNPKAPDFRNKDDRSLVLWLTSRSAPEWINELLPELDARYQQ 394
Query: 204 R 204
R
Sbjct: 395 R 395
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGE-ALWL 182
W +NP W+DNR+ K P APDFK KS ALWL
Sbjct: 221 WDSLRSNPELWFDNRRTKTNPKAPDFKLKSDRSVALWL 258
>gi|159490401|ref|XP_001703165.1| hypothetical protein CHLREDRAFT_154571 [Chlamydomonas reinhardtii]
gi|158270705|gb|EDO96541.1| predicted protein [Chlamydomonas reinhardtii]
Length = 167
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 10/76 (13%)
Query: 127 SKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLY----PGAPDFKHK-STGEALW 181
S SRGGE + + W ANP +WWDNR++K P PDF++K G+A+W
Sbjct: 47 SASRGGE----RAQQVVAFWEDLRANPGDWWDNREDKASGRGNPNIPDFRNKMDRGKAVW 102
Query: 182 L-DPKDPPWVKKQLQR 196
+ D P WV++ LQ+
Sbjct: 103 IVDRCAPAWVREWLQQ 118
>gi|255089659|ref|XP_002506751.1| predicted protein [Micromonas sp. RCC299]
gi|226522024|gb|ACO68009.1| predicted protein [Micromonas sp. RCC299]
Length = 431
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 145 LWHVYFANPYEWWDNRKNKLYPGA----PDFKHKSTGEALWLDPKDPP 188
LW NP WWDNR+ K PG PDFKHK T LW++ +D P
Sbjct: 297 LWREVLDNPDAWWDNRERKSAPGGNPRYPDFKHKDTQTPLWIESRDTP 344
>gi|359806154|ref|NP_001241452.1| uncharacterized protein LOC100788700 [Glycine max]
gi|255635066|gb|ACU17891.1| unknown [Glycine max]
Length = 309
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 31/60 (51%), Gaps = 11/60 (18%)
Query: 124 SVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLD 183
++ K GGE+ W+ N WWDNR NK APDFKHK TG+ LWLD
Sbjct: 233 AISKKGDGGES-----------WNDLVQNYANWWDNRLNKRNAKAPDFKHKETGKGLWLD 281
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 57 SILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECG 116
SI + GD+A + HL ND I++ G+L + S ++ +V+V+ N+V+
Sbjct: 77 SIPVIFEGDLAHTAKFHLNLNDCIHIAGKLTTDSPQLEHLHPQSNIQVMVQTLNFVQRYP 136
Query: 117 Q-----GLAFKKSVESKSRGGEAGMEKYENRF--YLWHVYFANPYEWWDNRKNK----LY 165
Q + K + + +K + W NP +W D R++K +
Sbjct: 137 QPNTTTSIDLKPQPQPQPEHSIPSAKKNPDSSSPSPWRDLLDNPMQWRDFRESKRNGLVK 196
Query: 166 PGAPDFKHKSTGEALWLDPKDPPWVKKQLQRI 197
P PDFK K G +LWL KD WV +L+ +
Sbjct: 197 PKHPDFKRKD-GYSLWLG-KDEKWVLPKLEEL 226
>gi|218189730|gb|EEC72157.1| hypothetical protein OsI_05193 [Oryza sativa Indica Group]
gi|222619870|gb|EEE56002.1| hypothetical protein OsJ_04758 [Oryza sativa Japonica Group]
Length = 421
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 145 LWHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRIDSMMEER 204
LW NP +WWDNR +K PDFKHK G LW+ + P W ID++ +
Sbjct: 355 LWQDLVDNPGKWWDNRSDKPSIKYPDFKHKENGTPLWIGSQTPKWA------IDALPPAK 408
Query: 205 GSR 207
S+
Sbjct: 409 PSK 411
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 66/176 (37%), Gaps = 50/176 (28%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDK------------------NGKLC 99
I + D+AQ+ HL+ D IYV+GQL K GK
Sbjct: 124 IPIIFQDDLAQVAASHLQEKDHIYVSGQLTGDIPPTKLMDGQANIQVLAQMLSFVGGKAV 183
Query: 100 LCYKVVVED--FNYVRECGQGLAFKKSVE---SKSRGGEAGMEK---------------- 138
+V E+ F + E + + KK + ++ G GM
Sbjct: 184 QADSMVDEEEGFMQIVEAEKKVETKKFIPKYPPRTVSGAMGMTNKAISFSHAPLFTCPPV 243
Query: 139 ----YENR---FYLWHVYFANPYEWWDNRKNK----LYPGAPDFKHKSTGEALWLD 183
Y N+ LW+ ANP +W DNR K + PDFK+ + EALWLD
Sbjct: 244 SQYCYRNKDKLNKLWNDVVANPQDWTDNRPQKKNGSINAKYPDFKNNVSKEALWLD 299
>gi|168048334|ref|XP_001776622.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672067|gb|EDQ58610.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 142
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 35/65 (53%), Gaps = 17/65 (26%)
Query: 145 LWHVYFANPYEWWDNRKNKLY---------------PGAPDFKHKSTGEALWLDPK-DPP 188
LW YFA P +WWDNR +KL P +PD KHK TG+ALW+D P
Sbjct: 54 LWE-YFAGPSQWWDNRIHKLERCTPGLSTVEERLRNPRSPDLKHKVTGKALWIDGCFTPE 112
Query: 189 WVKKQ 193
WVK Q
Sbjct: 113 WVKFQ 117
>gi|18397761|ref|NP_564370.1| protein OSB4 [Arabidopsis thaliana]
gi|75334520|sp|Q9FYJ2.1|OSB4_ARATH RecName: Full=Protein OSB4, chloroplastic; AltName: Full=Organellar
single-stranded DNA-binding protein 4; Flags: Precursor
gi|9755375|gb|AAF98182.1|AC000107_5 F17F8.7 [Arabidopsis thaliana]
gi|332193185|gb|AEE31306.1| protein OSB4 [Arabidopsis thaliana]
Length = 360
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 33/146 (22%)
Query: 64 GDMAQLCQKHLKPNDFIYVTGQL------------HSYSKVDKNGKLCLCYKVVVEDFNY 111
GD+A +LK ND +++TGQ+ ++ ++ K+ ++V+V D +Y
Sbjct: 127 GDLAHTANSYLKKNDRVHITGQILGDVIQSGANSDQAHVQLFKSFHGSFSHQVMVRDLHY 186
Query: 112 VR----------ECGQGLAFKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRK 161
+ Q K S RG E G LW P EW D R+
Sbjct: 187 IEGSKAMPKVLPTLDQNEGVLKHSASVQRGREFGTN-------LWFDLVDKPNEWCDYRE 239
Query: 162 NK----LYPGAPDFKHKSTGEALWLD 183
K + P PDFK K +ALWL+
Sbjct: 240 MKQNGSVNPKHPDFKKKDGSQALWLN 265
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQL 194
W N +WWDNR +K P +PDFKHK TG LWL P WV ++L
Sbjct: 296 WKDLVDNMNKWWDNRVDKRTPKSPDFKHKETGVGLWLS-DSPSWVLEKL 343
>gi|21554639|gb|AAM63642.1| unknown [Arabidopsis thaliana]
Length = 360
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQL 194
W N +WWDNR +K P +PDFKHK TG LWL P WV ++L
Sbjct: 296 WKDLVDNMNKWWDNRVDKRTPKSPDFKHKETGVGLWLS-DSPSWVLEKL 343
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 33/146 (22%)
Query: 64 GDMAQLCQKHLKPNDFIYVTGQL------------HSYSKVDKNGKLCLCYKVVVEDFNY 111
GD+A +LK ND +++TGQ+ ++ ++ K+ ++V+V D +Y
Sbjct: 127 GDLAHTANSYLKKNDRVHITGQILGDVIQSGANSDQAHVQLFKSFHGSFSHQVMVRDLHY 186
Query: 112 VR----------ECGQGLAFKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRK 161
+ Q K S RG E G LW P EW D R+
Sbjct: 187 IEGSKAMPKVLPTLDQNEGVLKHSASVQRGREFGTN-------LWFDLVDKPNEWCDYRE 239
Query: 162 NK----LYPGAPDFKHKSTGEALWLD 183
K + P PDFK K +ALWL+
Sbjct: 240 MKQNGSVNPKHPDFKMKDGSQALWLN 265
>gi|159490399|ref|XP_001703164.1| chloroplast-targeted RNA-binding protein [Chlamydomonas
reinhardtii]
gi|37545634|gb|AAM76787.1| RNA-binding protein RB38 [Chlamydomonas reinhardtii]
gi|37723144|gb|AAP30010.1| 38 kDa RNA-binding protein [Chlamydomonas reinhardtii]
gi|158270704|gb|EDO96540.1| chloroplast-targeted RNA-binding protein [Chlamydomonas
reinhardtii]
Length = 382
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKST-GEALWLDPKD-PPWVKKQLQRIDS-MME 202
W +NP EW+DNR K P APDF K ALW+D +D P WV++ L +DS +
Sbjct: 47 WEQLRSNPDEWYDNRTRKTNPKAPDFVRKDDRAVALWIDGRDVPTWVEELLHDLDSRQVN 106
Query: 203 ERGSRDLGS 211
R RD S
Sbjct: 107 RRQQRDSES 115
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDF-KHKSTGEALWLDPK-DPPWVKKQLQRID 198
W ANP EW+DNR K PDF + ALWLD + PPWV L +D
Sbjct: 233 WESLRANPIEWYDNRSRKTSDRQPDFVRRDDRRAALWLDSRGAPPWVGDLLAELD 287
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKST-GEALWL 182
W ANP W+DNR NK P +PDF+ K +ALW+
Sbjct: 321 WESLRANPEAWFDNRNNKQTPKSPDFRKKDDRTQALWV 358
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDF-KHKSTGEALWLDPKD-PPWVKKQLQRIDSMMEE 203
W +NP EW+DNR K PDF + ALWLD + P WV + L +D
Sbjct: 141 WEALRSNPDEWYDNRNRKTSDRQPDFVRRDDRNSALWLDSRGVPEWVDELLAELDERQAA 200
Query: 204 R 204
R
Sbjct: 201 R 201
>gi|255577289|ref|XP_002529526.1| hypothetical protein RCOM_1716690 [Ricinus communis]
gi|223531010|gb|EEF32864.1| hypothetical protein RCOM_1716690 [Ricinus communis]
Length = 281
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 11/110 (10%)
Query: 94 KNGKLCLCYKVVVEDFNYVRECGQGLAFKKSVESKSRGGEAGMEKY-ENRFYLWHVYFAN 152
KNG+L + +++E +G+AF K ++ GG+ M K ++ W ++
Sbjct: 98 KNGELLYIDHATPK---WIQEKLEGMAFDK--KTTVEGGKGSMIKNGDSVLNSWRELASD 152
Query: 153 PYEWWDNRKNKL----YPGAPDFKHKSTGEALWLDPKDPPWVKKQLQRID 198
P +WWD R +KL P PDFK K ALWL+ K P W+ +L++++
Sbjct: 153 PKQWWDYRSSKLNGLVNPKHPDFKRKDGDVALWLN-KAPRWILSELEKLE 201
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 146 WHVYFANPYEWWDNRKNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQL 194
W +P +WWDNR NK PDFKHK TG LWL P WV +L
Sbjct: 221 WTDLVGHPNKWWDNRLNKKNERYPDFKHKETGVGLWLS-NSPTWVLSEL 268
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 113 RECGQGLAFKKSVESKSRGGEAGMEKYENRF-YLWHVYFANPYEWWDNRKNKLYPGAPDF 171
RE Q A + S E + AG+ K + W +P+EWWD R P F
Sbjct: 35 RETLQKCAKRSSQEEANITFVAGIAKGDEYVEQSWKDLLTSPHEWWDIRSQVDNPKGASF 94
Query: 172 KHKSTGEALWLDPKDPPWVKKQLQ 195
+ K GE L++D P W++++L+
Sbjct: 95 ERKKNGELLYIDHATPKWIQEKLE 118
>gi|413933636|gb|AFW68187.1| hypothetical protein ZEAMMB73_594975, partial [Zea mays]
Length = 83
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 166 PGAPDFKHKSTGEALWLDPK-DPPWVKKQLQRIDSMM 201
P PDFKHK TGEALW+D + +P WV QL +DS M
Sbjct: 21 PRYPDFKHKQTGEALWVDGRNNPNWVISQLAVLDSRM 57
>gi|108709796|gb|ABF97591.1| Single-strand binding protein family protein, expressed [Oryza
sativa Japonica Group]
gi|215717048|dbj|BAG95411.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 152
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKV 104
+ L + G++A + KHLK ND +YV+G L+SY KVD +G+ YKV
Sbjct: 104 VTLNLQGELAHVSLKHLKQNDLVYVSGLLNSYHKVDPSGEKHTFYKV 150
>gi|407477568|ref|YP_006791445.1| flagellar motor switch protein FliG [Exiguobacterium antarcticum
B7]
gi|407061647|gb|AFS70837.1| Flagellar motor switch protein FliG [Exiguobacterium antarcticum
B7]
Length = 335
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 18/172 (10%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDF-------N 110
+++++G ++A KHL + ++T Q+ S ++D KL V+E+F N
Sbjct: 15 LMISLGPEVAATVYKHLSEEEMEWLTLQISSMKRIDPEEKLE-----VLEEFHELATAQN 69
Query: 111 YVRECGQGLAFKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPD 170
Y+ + G G F KSV K+ G E ME + L P+E+ K
Sbjct: 70 YITQGGIG--FAKSVLEKALGEEKAMELI---YRLTSTLQVRPFEFARKADPKQLLNFIQ 124
Query: 171 FKHKSTGEALWLDPKDPPWVKKQLQRIDSMMEERGSRDLGSLSRVSTWVYDE 222
+H T AL L DP + L + + + +R + ++ R++ + E
Sbjct: 125 NEHPQTI-ALVLAHLDPAKSGQILSELPAEAQSDVARRIATMDRMNPEIISE 175
>gi|384252371|gb|EIE25847.1| hypothetical protein COCSUDRAFT_40099 [Coccomyxa subellipsoidea
C-169]
Length = 749
Score = 40.4 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 145 LWHVYFANPYEWWDNR-KNKLYPGAPDFKHKSTGEALWLDPKDPPWVKKQ 193
LW +FA P + D R K + PDFKH +G LWL+ P WV K+
Sbjct: 17 LWRQFFAEPGSFQDLRPKKEGIAKRPDFKHSESGLVLWLNTA-PDWVLKR 65
>gi|172057887|ref|YP_001814347.1| flagellar motor switch protein FliG [Exiguobacterium sibiricum
255-15]
gi|171990408|gb|ACB61330.1| flagellar motor switch protein FliG [Exiguobacterium sibiricum
255-15]
Length = 335
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 18/172 (10%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDF-------N 110
+++++G ++A KHL + ++T Q+ S ++D KL V+E+F N
Sbjct: 15 LMISLGPEVAASVYKHLSEEEMEWLTLQISSMKRIDPEEKLE-----VLEEFHELATAQN 69
Query: 111 YVRECGQGLAFKKSVESKSRGGEAGMEKYENRFYLWHVYFANPYEWWDNRKNKLYPGAPD 170
Y+ + G G F KSV K+ G E ME + L P+E+ K
Sbjct: 70 YITQGGIG--FAKSVLEKALGEEKAMELI---YRLTSTLQVRPFEFARKADPKQLLNFIQ 124
Query: 171 FKHKSTGEALWLDPKDPPWVKKQLQRIDSMMEERGSRDLGSLSRVSTWVYDE 222
+H T AL L DP + L + + + +R + ++ R++ + E
Sbjct: 125 NEHPQTI-ALVLAHLDPVKSGQILSELPAESQSDVARRIATMDRMNPEIISE 175
>gi|342731743|ref|YP_004770582.1| single-stranded DNA-binding protein [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|384455183|ref|YP_005667776.1| single-strand binding protein family [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|417959028|ref|ZP_12601900.1| Single-stranded DNA-binding protein [Candidatus Arthromitus sp.
SFB-1]
gi|417961076|ref|ZP_12603559.1| Single-stranded DNA-binding protein [Candidatus Arthromitus sp.
SFB-2]
gi|417963897|ref|ZP_12605746.1| Single-stranded DNA-binding protein [Candidatus Arthromitus sp.
SFB-3]
gi|417965405|ref|ZP_12606939.1| Single-stranded DNA-binding protein [Candidatus Arthromitus sp.
SFB-4]
gi|417968371|ref|ZP_12609399.1| Single-stranded DNA-binding protein [Candidatus Arthromitus sp.
SFB-co]
gi|418016871|ref|ZP_12656434.1| single-strand binding protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|418371986|ref|ZP_12964082.1| Single-stranded DNA-binding protein [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|342329198|dbj|BAK55840.1| single-stranded DNA-binding protein [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345505605|gb|EGX27901.1| single-strand binding protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346983524|dbj|BAK79200.1| single-strand binding protein family [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|380331508|gb|EIA22543.1| Single-stranded DNA-binding protein [Candidatus Arthromitus sp.
SFB-3]
gi|380334364|gb|EIA24790.1| Single-stranded DNA-binding protein [Candidatus Arthromitus sp.
SFB-1]
gi|380334428|gb|EIA24840.1| Single-stranded DNA-binding protein [Candidatus Arthromitus sp.
SFB-2]
gi|380337802|gb|EIA26807.1| Single-stranded DNA-binding protein [Candidatus Arthromitus sp.
SFB-4]
gi|380339819|gb|EIA28491.1| Single-stranded DNA-binding protein [Candidatus Arthromitus sp.
SFB-co]
gi|380342863|gb|EIA31290.1| Single-stranded DNA-binding protein [Candidatus Arthromitus sp.
SFB-mouse-SU]
Length = 114
Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 26/50 (52%)
Query: 64 GDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVR 113
G ++ KHL D I V G+L S VDK+G VV EDF +VR
Sbjct: 55 GKKGEIILKHLHKGDLISVGGRLRMGSYVDKDGNKKYISDVVAEDFKFVR 104
>gi|347541911|ref|YP_004856547.1| single-strand binding protein family [Candidatus Arthromitus sp.
SFB-rat-Yit]
gi|346984946|dbj|BAK80621.1| single-strand binding protein family [Candidatus Arthromitus sp.
SFB-rat-Yit]
Length = 114
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 25/50 (50%)
Query: 64 GDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVR 113
G + KHL D I V G+L S VDK+G VV EDF +VR
Sbjct: 55 GKKGDIILKHLHKGDLISVGGRLRMGSYVDKDGNKKYISDVVAEDFKFVR 104
>gi|343495923|ref|ZP_08734032.1| single-stranded DNA-binding protein [Vibrio nigripulchritudo ATCC
27043]
gi|342822049|gb|EGU56808.1| single-stranded DNA-binding protein [Vibrio nigripulchritudo ATCC
27043]
Length = 180
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 60 LAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYV------R 113
+A+ G +A++ ++L+ +Y+ GQL + D+NG+ +VVV+ FN V R
Sbjct: 58 VALFGKLAEVAGEYLRKGSQVYIEGQLQTRKWQDQNGQDRYTTEVVVQGFNGVMQMLGGR 117
Query: 114 ECGQG 118
+ GQG
Sbjct: 118 QQGQG 122
>gi|423685067|ref|ZP_17659875.1| single-stranded DNA-binding protein [Vibrio fischeri SR5]
gi|371495568|gb|EHN71163.1| single-stranded DNA-binding protein [Vibrio fischeri SR5]
Length = 178
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 60 LAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYV 112
+A+ G +A++ ++L+ +YV GQL + D+NG+ +VVV+ FN V
Sbjct: 58 VALFGKLAEVAGEYLRKGSQVYVEGQLQTRKWQDQNGQDRFTTEVVVQGFNGV 110
>gi|406968966|gb|EKD93706.1| hypothetical protein ACD_28C00077G0010 [uncultured bacterium]
Length = 127
Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 66 MAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVR 113
+A C KHLK IY+ G+L + + DKN +V E N++R
Sbjct: 61 LADHCNKHLKKGSAIYIEGKLQNRTYEDKNKAKHYITEVTAESVNFIR 108
>gi|451822330|ref|YP_007458531.1| single-stranded DNA-binding protein 1 [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451788309|gb|AGF59277.1| single-stranded DNA-binding protein 1 [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 115
Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 58 ILLAVGGDMAQLCQKHLKPNDFIYVTGQLHSYSKVDKNGKLCLCYKVVVEDFNYVRECGQ 117
I + V G A++ K++K I V+G+L + S DK+G +VV EDF ++ Q
Sbjct: 49 IPIRVWGKKAEVIVKYMKKGSLITVSGRLRTGSYEDKDGNKKYIIEVVAEDFKFIENKKQ 108
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,709,186,808
Number of Sequences: 23463169
Number of extensions: 156894598
Number of successful extensions: 306534
Number of sequences better than 100.0: 106
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 306286
Number of HSP's gapped (non-prelim): 158
length of query: 222
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 85
effective length of database: 9,144,741,214
effective search space: 777303003190
effective search space used: 777303003190
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 74 (33.1 bits)