Query 027560
Match_columns 222
No_of_seqs 131 out of 1078
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 19:56:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027560.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027560hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1olm_A SEC14-like protein 2; l 95.6 0.13 4.5E-06 44.2 11.4 88 36-132 281-383 (403)
2 3rgh_A Filamin-A; cell adhesio 93.5 0.78 2.7E-05 31.3 9.1 43 74-116 40-85 (100)
3 2dj4_A Filamin-B; beta-sandwic 93.5 0.4 1.4E-05 33.2 7.7 66 60-127 32-100 (108)
4 2d7n_A Filamin-C; beta-sandwic 93.4 0.26 8.9E-06 33.4 6.5 54 74-127 23-79 (93)
5 2d7m_A Filamin-C; beta-sandwic 93.1 0.75 2.6E-05 32.1 8.8 66 60-127 33-101 (115)
6 2dmb_A Filamin-B; beta-sandwic 92.9 0.97 3.3E-05 32.2 9.2 55 74-128 44-101 (124)
7 4dzg_A PLIG; lysozyme inhibito 92.5 0.13 4.4E-06 36.4 3.9 70 38-115 23-95 (114)
8 2ee6_A Filamin-B; beta-sandwic 92.4 0.85 2.9E-05 31.3 8.1 53 74-127 43-97 (105)
9 2e9j_A Filamin-B; beta-sandwic 92.2 0.72 2.5E-05 32.5 7.7 66 60-127 43-111 (119)
10 3cnk_A Filamin-A; FLNA24, X-RA 91.5 2 7E-05 28.3 9.2 43 74-116 31-76 (89)
11 2eea_A Filamin-B; beta-sandwic 91.3 2.6 8.9E-05 29.3 9.8 54 74-128 53-108 (115)
12 2ee9_A Filamin-B; beta-sandwic 91.3 0.76 2.6E-05 31.2 6.6 54 74-127 31-87 (95)
13 2dia_A Filamin-B; beta-sandwic 90.9 1.5 5.1E-05 30.4 8.1 55 74-128 43-100 (113)
14 2nqc_A Filamin-C; immunoglobul 90.8 3.5 0.00012 29.9 10.4 65 60-127 65-131 (138)
15 2d7p_A Filamin-C; beta-sandwic 90.8 1.6 5.3E-05 30.5 8.1 54 74-127 42-98 (112)
16 2bp3_A Filamin A; structural p 90.7 2.3 7.7E-05 28.6 8.7 53 74-127 38-92 (97)
17 1v05_A Filamin C; actin-bindin 90.5 2.3 7.8E-05 28.5 8.6 43 74-116 38-83 (96)
18 2k9u_A Gamma filamin; cytoskel 90.4 3.3 0.00011 28.9 9.9 66 59-127 37-104 (119)
19 2dlg_A Filamin-B; beta-sandwic 90.2 0.7 2.4E-05 31.8 5.8 54 74-127 32-88 (102)
20 2p9r_A Alpha-2-M, alpha-2-macr 89.7 3.3 0.00011 27.9 10.4 63 53-115 15-85 (102)
21 2w0p_A Filamin-A; alternative 88.5 3.9 0.00014 27.2 8.7 53 74-127 35-89 (94)
22 2dmc_A Filamin-B; beta-sandwic 87.1 2.3 8E-05 29.8 6.9 54 74-127 46-102 (116)
23 2ds4_A Tripartite motif protei 86.8 3.6 0.00012 28.2 7.7 54 74-127 50-108 (113)
24 2di8_A Filamin-B; beta-sandwic 86.7 6 0.00021 27.3 8.8 54 74-128 43-98 (111)
25 4b7l_A Filamin-B; structural p 86.5 2.9 0.0001 35.2 8.3 81 32-116 245-335 (347)
26 2eec_A Filamin-B; beta-sandwic 86.0 7.3 0.00025 27.5 9.3 66 60-128 41-108 (125)
27 2dic_A Filamin-B; beta-sandwic 85.8 6.4 0.00022 26.7 8.6 53 74-127 43-97 (105)
28 4g9s_B Inhibitor of G-type lys 85.7 3.4 0.00012 28.6 7.1 90 33-131 16-109 (111)
29 2d7o_A Filamin-C; beta-sandwic 85.6 3.2 0.00011 28.7 6.9 54 74-128 43-98 (111)
30 2k7p_A Filamin-A; IG-like, ABP 83.6 9.1 0.00031 28.9 9.3 53 74-127 129-183 (188)
31 2dib_A Filamin-B; beta-sandwic 81.9 3 0.0001 29.5 5.6 54 74-127 58-114 (128)
32 3sd2_A Putative member of DUF3 80.8 6.2 0.00021 26.9 6.5 70 37-117 20-92 (101)
33 1qfh_A Protein (gelation facto 80.1 13 0.00045 28.4 9.2 43 74-117 136-181 (212)
34 3d33_A Domain of unknown funct 79.8 6.4 0.00022 27.2 6.5 55 54-115 37-96 (108)
35 2k7p_A Filamin-A; IG-like, ABP 78.7 5.3 0.00018 30.3 6.4 43 74-116 35-80 (188)
36 3isy_A Bsupi, intracellular pr 78.6 13 0.00045 26.2 7.9 38 53-91 16-60 (120)
37 2k7q_A Filamin-A; IG-like, ABP 78.2 9.3 0.00032 28.9 7.7 53 74-127 129-183 (191)
38 4fxk_A Complement C4 beta chai 76.5 25 0.00086 31.5 11.3 62 53-115 133-201 (656)
39 2di9_A Filamin-B; beta-sandwic 75.6 19 0.00063 25.5 10.3 53 74-127 63-117 (131)
40 1wlh_A Gelation factor; ABP-12 73.6 11 0.00036 30.8 7.3 53 74-127 235-290 (311)
41 3osv_A Flagellar basal-BODY RO 72.1 18 0.00061 25.9 7.4 56 55-115 24-90 (138)
42 1gl2_D Syntaxin 8, vesicle tra 71.5 15 0.00051 22.6 6.1 46 146-191 9-54 (65)
43 3irp_X URO-adherence factor A; 68.4 7.6 0.00026 33.6 5.5 43 73-115 330-372 (429)
44 1jcd_A Major outer membrane li 68.1 16 0.00056 21.7 6.1 28 147-174 5-32 (52)
45 2nps_D Syntaxin-6; vesicle fus 66.8 23 0.00078 22.9 6.7 47 145-191 18-64 (82)
46 3c75_A Amicyanin; copper prote 66.0 24 0.00083 24.8 7.0 17 96-112 103-120 (132)
47 3hrz_A Cobra venom factor; ser 65.9 23 0.0008 32.0 8.5 61 54-115 118-182 (627)
48 2hr0_A Complement C3 beta chai 65.2 28 0.00097 31.4 8.9 61 54-115 120-189 (645)
49 3c12_A FLGD, flagellar protein 64.5 17 0.00058 25.9 6.0 42 74-115 40-92 (138)
50 1qfh_A Protein (gelation facto 62.6 13 0.00045 28.4 5.4 43 74-116 45-90 (212)
51 2k7q_A Filamin-A; IG-like, ABP 62.6 17 0.00058 27.4 5.9 43 74-116 32-77 (191)
52 2k8e_A UPF0339 protein YEGP; p 60.6 28 0.00097 24.8 6.4 63 50-116 10-90 (130)
53 3jqw_A COLH protein, collagena 60.4 41 0.0014 23.5 10.0 69 41-115 35-104 (121)
54 2j3s_A Filamin-A; cytoskeleton 58.1 58 0.002 26.1 8.8 42 74-116 229-272 (288)
55 1n7s_D SNAP-25A; neuronal snar 58.0 30 0.001 21.2 6.1 47 145-191 9-55 (66)
56 2j3s_A Filamin-A; cytoskeleton 56.6 69 0.0024 25.6 9.0 42 74-116 38-81 (288)
57 1sfc_D Protein (SNAP-25B), pro 56.3 38 0.0013 22.1 6.1 47 145-191 28-74 (87)
58 2x5p_A FBA2, fibronectin bindi 53.8 19 0.00066 25.3 4.5 40 73-114 43-82 (121)
59 3swy_A Cyclic nucleotide-gated 52.6 31 0.0011 19.8 5.5 32 146-177 5-36 (46)
60 3hd7_B Syntaxin-1A; membrane p 51.4 55 0.0019 22.3 9.2 20 146-165 21-40 (109)
61 1wlh_A Gelation factor; ABP-12 49.1 37 0.0013 27.5 6.2 43 74-116 144-189 (311)
62 3swf_A CGMP-gated cation chann 47.9 52 0.0018 21.0 5.4 39 146-184 7-45 (74)
63 3b5n_D Protein transport prote 47.8 46 0.0016 20.4 6.1 46 146-191 10-55 (64)
64 2b39_A C3; thioester, immune d 45.9 42 0.0014 34.1 7.2 60 54-114 141-209 (1661)
65 4acq_A Alpha-2-macroglobulin; 43.0 1.3E+02 0.0045 30.1 10.1 61 54-115 118-187 (1451)
66 1qle_D Cytochrome AA3, ccytoch 42.7 45 0.0015 18.8 4.5 29 179-207 13-41 (43)
67 3cu7_A Complement C5; Mg domai 42.5 66 0.0023 32.7 7.9 61 54-115 138-206 (1676)
68 1l4a_D S-SNAP25 fusion protein 41.9 48 0.0016 21.7 4.7 46 146-191 30-75 (87)
69 3e8v_A Possible transglutamina 41.2 72 0.0025 20.7 5.4 40 74-113 19-68 (82)
70 2akf_A Coronin-1A; coiled coil 40.3 38 0.0013 17.3 4.3 19 149-167 2-20 (32)
71 1m56_D Cytochrome C oxidase; m 39.5 58 0.002 19.1 4.9 27 181-207 23-49 (51)
72 3prx_B Cobra venom factor; imm 39.0 83 0.0028 32.1 7.9 42 74-115 160-204 (1642)
73 3gf8_A Putative polysaccharide 38.6 41 0.0014 27.3 4.9 67 47-114 7-83 (296)
74 3ogl_Q JAZ1 incomplete degron 38.6 11 0.00038 17.9 0.8 11 210-220 8-18 (21)
75 2q0z_X Protein Pro2281; SEC63, 38.1 1.3E+02 0.0045 24.6 8.1 97 31-133 218-330 (339)
76 3pay_A Putative adhesin; struc 34.7 32 0.0011 28.3 3.6 41 73-113 36-82 (314)
77 1gd2_E Transcription factor PA 31.8 73 0.0025 20.0 4.2 33 144-176 27-59 (70)
78 2pn5_A TEP1R, thioester-contai 31.1 3.9E+02 0.013 26.3 14.1 62 54-115 114-184 (1325)
79 2xwx_A GBPA, glcnac-binding pr 27.5 2.8E+02 0.0096 23.5 9.0 44 74-117 326-375 (391)
80 3ogk_Q JAZ1 incomplete degron 26.9 19 0.00065 17.3 0.5 10 211-220 4-13 (22)
81 1wmd_A Protease; alpha-beta hy 26.6 2.9E+02 0.0098 23.2 8.9 42 74-115 367-419 (434)
82 4hci_A Cupredoxin 1; structura 25.0 1.2E+02 0.0039 19.7 4.6 17 95-111 68-85 (100)
83 2pz4_A Protein GBS052; SPAB, G 25.0 1.5E+02 0.0051 22.9 5.9 60 53-112 120-198 (239)
84 2yko_A LINE-1 ORF1P; RNA-bindi 24.9 2.1E+02 0.0073 22.3 6.6 26 147-172 7-32 (233)
85 3hd7_A Vesicle-associated memb 24.8 1.5E+02 0.0051 19.3 9.9 28 165-192 38-65 (91)
86 3c3f_A Alpha/beta peptide with 24.7 87 0.003 16.6 4.1 20 149-168 4-23 (34)
87 1kd8_B GABH BLL, GCN4 acid bas 24.6 90 0.0031 16.8 4.7 21 149-169 4-24 (36)
88 1nqj_A Class 1 collagenase; be 24.4 1.8E+02 0.0061 20.1 8.5 64 42-114 38-106 (119)
89 2pnv_A Small conductance calci 23.8 1E+02 0.0036 17.3 3.4 20 149-168 19-38 (43)
90 3swf_A CGMP-gated cation chann 22.0 1.6E+02 0.0055 18.7 5.0 19 150-168 4-22 (74)
91 2r5o_A Putative ATP binding co 21.3 68 0.0023 23.8 3.1 39 51-90 66-104 (188)
92 2djm_A Glucoamylase A; beta sa 20.4 2.1E+02 0.0071 19.4 5.3 70 40-112 4-84 (106)
No 1
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*
Probab=95.58 E-value=0.13 Score=44.17 Aligned_cols=88 Identities=15% Similarity=0.126 Sum_probs=56.6
Q ss_pred EEEEcCCCcceeeEEcC-CCcEEEEEEEEeeCCCCCCCCeeEEEEE-C----CC---CC--eEEeeecc----ceeeEEE
Q 027560 36 WLQIPSSGTKCVSEEIN-SNVVVLADYYVIDEAHPEHPPTVSAKVT-S----PY---GN--NLHHNENV----THGQFAF 100 (222)
Q Consensus 36 ~f~i~~~~~~Cf~e~v~-~~~~i~~~y~v~~~~~~~~~~~i~v~v~-~----p~---g~--~v~~~~~~----~~~~f~f 100 (222)
++.|++|+....-..+. +|+.+.=.|.+.+ . +|.|.|+ . ++ |. .+....+. .-..=++
T Consensus 281 ~~~V~~g~~~~v~~~v~~~g~~l~W~f~~~~------~-DI~F~v~~~~~~~~~~~~~~~~~v~p~~r~~~~~~~~~G~~ 353 (403)
T 1olm_A 281 SVQISRGSSHQVEYEILFPGCVLRWQFMSDG------A-DVGFGIFLKTKMGERQRAGEMTEVLPNQRYNSHLVPEDGTL 353 (403)
T ss_dssp EEEECTTCEEEEEEEECSTTCEEEEEEEESS------S-CEEEEEEEC----CCCCGGGSEEEEEEEEECTTTSCEEEEE
T ss_pred EEEEcCCCEEEEEEEEcCCCCEEEEEEEecC------C-cEEEEEEEecccccccCCCcceEEeeeeeecCccccccCEE
Confidence 48889999999988887 5888887777732 1 7777776 1 11 11 22222111 0112346
Q ss_pred EeeccceeeeeeeeCCCCCCcccEEEEEEEEe
Q 027560 101 TTTEAGNYMACFWLGSNPQKVADATLGLDWRI 132 (222)
Q Consensus 101 ~~~~~G~y~iCf~n~~~~~~~~~~~v~f~i~~ 132 (222)
.+.++|.|.++|+|+.++.. .+++.+.+.+
T Consensus 354 ~~~~~G~y~l~fdNs~S~~~--~k~l~y~v~v 383 (403)
T 1olm_A 354 TCSDPGIYVLRFDNTYSFIH--AKKVNFTVEV 383 (403)
T ss_dssp ECCSCEEEEEEEECTTCCCC--SEEEEEEEEE
T ss_pred EcCCCeEEEEEEecccccee--ceEEEEEEEE
Confidence 78999999999999987643 3556665554
No 2
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=93.47 E-value=0.78 Score=31.26 Aligned_cols=43 Identities=14% Similarity=0.248 Sum_probs=29.7
Q ss_pred eeEEEEECCCCCeEEee-eccceee--EEEEeeccceeeeeeeeCC
Q 027560 74 TVSAKVTSPYGNNLHHN-ENVTHGQ--FAFTTTEAGNYMACFWLGS 116 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~-~~~~~~~--f~f~~~~~G~y~iCf~n~~ 116 (222)
.+.+.|.+|+|..+.-. .+..+|. .+|+++..|.|.+.+.-..
T Consensus 40 ~l~v~i~~~~g~~~~~~v~d~~dGty~V~Y~p~~~G~y~i~V~~~g 85 (100)
T 3rgh_A 40 ELTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKYGG 85 (100)
T ss_dssp CEEEEEECTTSCBCEEEEEECSSSEEEEEEECCSSEEEEEEEEETT
T ss_pred eEEEEEECCCCCEeEEEEEeCCCCEEEEEEEeCCCeeEEEEEEECC
Confidence 89999999998654322 2333454 5778888999998885443
No 3
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=93.46 E-value=0.4 Score=33.19 Aligned_cols=66 Identities=15% Similarity=0.189 Sum_probs=39.6
Q ss_pred EEEEeeCCCCCCCCeeEEEEECCCCCeEEee-eccceeeE--EEEeeccceeeeeeeeCCCCCCcccEEEE
Q 027560 60 DYYVIDEAHPEHPPTVSAKVTSPYGNNLHHN-ENVTHGQF--AFTTTEAGNYMACFWLGSNPQKVADATLG 127 (222)
Q Consensus 60 ~y~v~~~~~~~~~~~i~v~v~~p~g~~v~~~-~~~~~~~f--~f~~~~~G~y~iCf~n~~~~~~~~~~~v~ 127 (222)
.|.+...+.++ ..+.+.|.+|+|..+.-. .+..+|.| +|++.+.|.|.+.+.-...+-.+.+..+.
T Consensus 32 ~F~V~~~~aG~--~~l~V~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~V~gSPF~v~ 100 (108)
T 2dj4_A 32 SFTVDSSKAGL--APLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADEEIPRSPFKVK 100 (108)
T ss_dssp EEEEECTTTCS--CCEEEEEECSSSCEECCCCEECSSSEEEEEECCSSCEEEEEEEEESSSBCTTCSEEEE
T ss_pred EEEEEECCCCC--ceEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCeeEEEEEEECCEECCCCCEEEE
Confidence 44444333333 289999999999654322 22335544 67778899999999765443223444443
No 4
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=93.43 E-value=0.26 Score=33.42 Aligned_cols=54 Identities=17% Similarity=0.188 Sum_probs=36.4
Q ss_pred eeEEEEECCCCCeEEee-ecccee--eEEEEeeccceeeeeeeeCCCCCCcccEEEE
Q 027560 74 TVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~-~~~~~~--~f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~ 127 (222)
++.+.|.+|+|..+.-. .+..+| ..+|++++.|.|.+++.-...+-.+.+..+.
T Consensus 23 ~l~v~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~g~~I~GSPF~v~ 79 (93)
T 2d7n_A 23 ELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFY 79 (93)
T ss_dssp CEEEEEECTTSCEECCEEEECSSSCEEEEECCSSCEEEEEEEEESSSCCTTCSEEEE
T ss_pred CEEEEEECCCCCccceEEEECCCCEEEEEEEccCCEEEEEEEEECCEeCCCCCeEEE
Confidence 89999999999865321 223345 4577889999999999765544333444444
No 5
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=93.11 E-value=0.75 Score=32.14 Aligned_cols=66 Identities=12% Similarity=0.247 Sum_probs=40.1
Q ss_pred EEEEeeCCCCCCCCeeEEEEECCCCCeEEee-eccceee--EEEEeeccceeeeeeeeCCCCCCcccEEEE
Q 027560 60 DYYVIDEAHPEHPPTVSAKVTSPYGNNLHHN-ENVTHGQ--FAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (222)
Q Consensus 60 ~y~v~~~~~~~~~~~i~v~v~~p~g~~v~~~-~~~~~~~--f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~ 127 (222)
.|.+...+.++ ..+.+.|.+|+|..+... .+..+|. .+|++.+.|.|.+.+.-...+-...+..+.
T Consensus 33 ~F~V~~~daG~--~~l~V~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~I~gSPF~v~ 101 (115)
T 2d7m_A 33 EFTIDARDAGE--GLLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIH 101 (115)
T ss_dssp EEEEEESSSCS--SCEEEEEECTTSCBCCEEEEECSSSCEEEEECCCSCEEEEEEEEESSCBCTTCSEEEE
T ss_pred EEEEEECCCCC--CEEEEEEECCCCCeeeeEEEECCCCEEEEEEEeCCCceEEEEEEECCEECCCCCEEEE
Confidence 45444333333 289999999998654222 2233554 467888999999999765543233444444
No 6
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=92.91 E-value=0.97 Score=32.17 Aligned_cols=55 Identities=18% Similarity=0.288 Sum_probs=36.0
Q ss_pred eeEEEEECCCCCeEEee-eccceee--EEEEeeccceeeeeeeeCCCCCCcccEEEEE
Q 027560 74 TVSAKVTSPYGNNLHHN-ENVTHGQ--FAFTTTEAGNYMACFWLGSNPQKVADATLGL 128 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~-~~~~~~~--f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~f 128 (222)
.+.+.|.+|+|..+.-+ .+..+|. .+|++++.|.|++.+.-...+-.+.+..+..
T Consensus 44 ~l~V~I~~p~g~~v~~~v~d~~dGty~V~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~v 101 (124)
T 2dmb_A 44 KVTCTVLTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTVMA 101 (124)
T ss_dssp CEEEEEECTTSCBCCCEEEECTTSCEEEEEECSSCEEEEEEEEESSCBCTTCSEEEEE
T ss_pred cEEEEEECCCCCEEeeEEEeCCCCEEEEEEEcCCCEEEEEEEEECCEECCCCCeEEEE
Confidence 89999999998654322 2223454 5788899999999997654432234444443
No 7
>4dzg_A PLIG; lysozyme inhibitor, G-type lysozyme binding, hydrolase inhib; HET: MLY; 2.02A {Aeromonas hydrophila subsp}
Probab=92.50 E-value=0.13 Score=36.39 Aligned_cols=70 Identities=11% Similarity=0.060 Sum_probs=50.1
Q ss_pred EEcCCCcceeeEEcCCCcEEEEEEEEeeCCCCCCCCeeEEEEECCCCCe---EEeeeccceeeEEEEeeccceeeeeeee
Q 027560 38 QIPSSGTKCVSEEINSNVVVLADYYVIDEAHPEHPPTVSAKVTSPYGNN---LHHNENVTHGQFAFTTTEAGNYMACFWL 114 (222)
Q Consensus 38 ~i~~~~~~Cf~e~v~~~~~i~~~y~v~~~~~~~~~~~i~v~v~~p~g~~---v~~~~~~~~~~f~f~~~~~G~y~iCf~n 114 (222)
.|.+++...+...+.+|+.+.+.. ... . .+.+.|.+|+|+. ++..+....+.++-+.+.+|.|++=+..
T Consensus 23 ~I~g~~~~~Y~~~a~aGQ~l~V~l--s~~-----~-~~~f~I~~P~~~~~~~l~~g~~~~~~~~~g~LP~sG~Y~i~V~~ 94 (114)
T 4dzg_A 23 SFTGYDTIHYTLVAXAGQTMTVXI--GGS-----S-NANFNVFAPGAQPGQAEAIGRNDGDGQWQGALPASGXYLIQVYQ 94 (114)
T ss_dssp CCBTTCCEEEECCC-CCCEEEC-C--EES-----T-TCEEEEECTTCCTTTSCCSEECCTTSCCEEECSSCC-CEEEEEC
T ss_pred EecCCCceEEEEEecCCCEEEEEe--CCC-----C-cEEEEEECCCCCcccceeccccCCcceEEEEecCCCcEEEEEEe
Confidence 578889999999999999888776 221 1 6788899999874 3433323345888899999999999976
Q ss_pred C
Q 027560 115 G 115 (222)
Q Consensus 115 ~ 115 (222)
.
T Consensus 95 ~ 95 (114)
T 4dzg_A 95 M 95 (114)
T ss_dssp C
T ss_pred c
Confidence 4
No 8
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.39 E-value=0.85 Score=31.30 Aligned_cols=53 Identities=15% Similarity=0.249 Sum_probs=35.7
Q ss_pred eeEEEEECCCCCeEEeeecccee--eEEEEeeccceeeeeeeeCCCCCCcccEEEE
Q 027560 74 TVSAKVTSPYGNNLHHNENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~~~~~~~--~f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~ 127 (222)
.+.+.|.+|++..+ +-.+..+| ..+|++..+|.|.+.+.-...+-.+.+..+.
T Consensus 43 ~l~v~v~~p~~~~v-~v~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~ 97 (105)
T 2ee6_A 43 GLSIAVEGPSKAEI-TFDDHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPESPYLVP 97 (105)
T ss_dssp CEEEEEESSSCEEE-EECCCCSSCCCEEEEESSCEEEEEEEEETTEECTTCSEEEE
T ss_pred cEEEEEECCCCCEE-EEEECCCCEEEEEEEECCCceEEEEEEECCEECCCcCEEEE
Confidence 88999999998655 33333455 5688899999999999754433223444443
No 9
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.16 E-value=0.72 Score=32.47 Aligned_cols=66 Identities=14% Similarity=0.250 Sum_probs=39.7
Q ss_pred EEEEeeCCCCCCCCeeEEEEECCCCCeEEee-eccceee--EEEEeeccceeeeeeeeCCCCCCcccEEEE
Q 027560 60 DYYVIDEAHPEHPPTVSAKVTSPYGNNLHHN-ENVTHGQ--FAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (222)
Q Consensus 60 ~y~v~~~~~~~~~~~i~v~v~~p~g~~v~~~-~~~~~~~--f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~ 127 (222)
.|.+...+.|. ..+.+.|.+|+|..+.-. .+..+|. .+|++.+.|.|.+.+.-...+-.+.+..+.
T Consensus 43 ~F~V~~~daG~--~~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~V~gSPF~v~ 111 (119)
T 2e9j_A 43 DFAIDARDAGE--GLLAVQITDQEGKPKRAIVHDNKDGTYAVTYIPDKTGRYMIGVTYGGDDIPLSPYRIR 111 (119)
T ss_dssp EEEEEESSCCC--CCEECCEECTTCCCCCEEEEECCSSEEEEEECCCSCSEEEECCEESSCBCTTCSEEEE
T ss_pred EEEEEECCCCC--CeEEEEEECCCCCEEEEEEEECCCCEEEEEEEeCCCEEEEEEEEECCEECCCCCEEEE
Confidence 45554333333 289999999998643221 2233554 467778899999999765443223444444
No 10
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=91.46 E-value=2 Score=28.27 Aligned_cols=43 Identities=14% Similarity=0.176 Sum_probs=29.2
Q ss_pred eeEEEEECCCCCeEEe-eecccee--eEEEEeeccceeeeeeeeCC
Q 027560 74 TVSAKVTSPYGNNLHH-NENVTHG--QFAFTTTEAGNYMACFWLGS 116 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~-~~~~~~~--~f~f~~~~~G~y~iCf~n~~ 116 (222)
.+.+.|.+|+|..+.- -.+..+| ..+|++++.|.|.+.+.-..
T Consensus 31 ~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 76 (89)
T 3cnk_A 31 MLLVGVHGPRTPCEEILVKHVGSRLYSVSYLLKDKGEYTLVVKWGH 76 (89)
T ss_dssp CEEEEEECSSSCCSEEEEEEEETTEEEEEEECCSCEEEEEEEEETT
T ss_pred cEEEEEECCCCCceeEEEEECCCCEEEEEEEECCCccEEEEEEECC
Confidence 7899999999863221 1222344 45678889999999987544
No 11
>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.27 E-value=2.6 Score=29.30 Aligned_cols=54 Identities=11% Similarity=0.147 Sum_probs=35.7
Q ss_pred eeEEEEECCCCCeEEeeecccee--eEEEEeeccceeeeeeeeCCCCCCcccEEEEE
Q 027560 74 TVSAKVTSPYGNNLHHNENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLGL 128 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~~~~~~~--~f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~f 128 (222)
.+.+.|.+|++..+ +-.+..+| ..+|++.++|.|.+.+.-...+-.+.+..+.+
T Consensus 53 ~l~v~v~~p~~~~~-~v~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~v 108 (115)
T 2eea_A 53 GLDLAIEGPSKAEI-SCIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKI 108 (115)
T ss_dssp CEEEEEESSSCCEE-CCBCCSSSEEEEEEECSSCSCEEEEEEESSSBCTTCSEEEEE
T ss_pred ceEEEEECCCCceE-EEEECCCCEEEEEEEeCCCeeEEEEEEECCEECCCCCEEEEE
Confidence 88999999998544 22333455 45788889999999997554332334444443
No 12
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.27 E-value=0.76 Score=31.23 Aligned_cols=54 Identities=13% Similarity=0.131 Sum_probs=35.7
Q ss_pred eeEEEEECCCCCeEEee-ecccee--eEEEEeeccceeeeeeeeCCCCCCcccEEEE
Q 027560 74 TVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~-~~~~~~--~f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~ 127 (222)
++.+.|.+|+|+.+.-. .+..+| ..+|++.+.|.|++++.-...+-.+.+..+.
T Consensus 31 ~ltv~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~G~~I~GSPF~v~ 87 (95)
T 2ee9_A 31 EITGEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYMGSHIPESPLQFY 87 (95)
T ss_dssp SEEEEEECTTSCEECCEEEECSSSCEEEECCCCSSEEEEEEEEESSCBCTTCSEEEE
T ss_pred CEEEEEECCCCCccccEEEeCCCCeEEEEEEecCCEeEEEEEEECCEECCCCCeEEE
Confidence 89999999999865321 222344 4567888999999999765543223444443
No 13
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=90.87 E-value=1.5 Score=30.43 Aligned_cols=55 Identities=16% Similarity=0.226 Sum_probs=35.2
Q ss_pred eeEEEEECCCCCeEEee-eccceee--EEEEeeccceeeeeeeeCCCCCCcccEEEEE
Q 027560 74 TVSAKVTSPYGNNLHHN-ENVTHGQ--FAFTTTEAGNYMACFWLGSNPQKVADATLGL 128 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~-~~~~~~~--f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~f 128 (222)
.+.+.|.+|+|..+.-. .+..+|. .+|++...|.|++.+.-...+-.+.+..+.+
T Consensus 43 ~l~v~i~~~~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~V~gSPf~v~v 100 (113)
T 2dia_A 43 ALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPARVKV 100 (113)
T ss_dssp CEEEEEEETTTEECEEEEEECTTSEEEEEEECSSCEEEEEEEEETTEECTTCSEEEEE
T ss_pred cEEEEEECCCCCEeeEEEEECCCCEEEEEEEeCCCccEEEEEEECCEECCCCCEEEEE
Confidence 88999999988644322 2333554 5778889999999997544332234444443
No 14
>2nqc_A Filamin-C; immunoglobulin, metal binding, immune system; 2.05A {Homo sapiens} SCOP: b.1.18.10 PDB: 2d7q_A 2k3t_A
Probab=90.84 E-value=3.5 Score=29.86 Aligned_cols=65 Identities=17% Similarity=0.241 Sum_probs=39.7
Q ss_pred EEEEeeCCCCCCCCeeEEEEECCCCCeEEeeecccee-eEEEEeeccceeeeeeeeCC-CCCCcccEEEE
Q 027560 60 DYYVIDEAHPEHPPTVSAKVTSPYGNNLHHNENVTHG-QFAFTTTEAGNYMACFWLGS-NPQKVADATLG 127 (222)
Q Consensus 60 ~y~v~~~~~~~~~~~i~v~v~~p~g~~v~~~~~~~~~-~f~f~~~~~G~y~iCf~n~~-~~~~~~~~~v~ 127 (222)
.|.+...+.+. ..+.+.|.+|++..+.-.+ ..+| ..+|++.++|.|.+-+.-.. .+-...+..+.
T Consensus 65 ~F~V~t~daG~--g~l~v~I~gPs~~~~~~~d-~~dGy~V~YtP~~~G~y~I~Vk~~g~~hI~GSPF~v~ 131 (138)
T 2nqc_A 65 EFIVNTLNAGS--GALSVTIDGPSKVQLDCRE-CPEGHVVTYTPMAPGNYLIAIKYGGPQHIVGSPFKAK 131 (138)
T ss_dssp EEEEECTTSCS--CCEEEEEESSSCCEEEEEE-ETTEEEEEEECCSCEEEEEEEEESSSCBCTTCSEEEE
T ss_pred EEEEEEcCCCC--CcEEEEEECCCCCeeeEEE-CCCcEEEEEEcCCCEEEEEEEEECCcccCCCCCeEEE
Confidence 35554333322 2899999999987553322 2344 45778889999999887554 33223444444
No 15
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=90.76 E-value=1.6 Score=30.48 Aligned_cols=54 Identities=13% Similarity=0.124 Sum_probs=35.3
Q ss_pred eeEEEEECCCCCeEEee-ecccee--eEEEEeeccceeeeeeeeCCCCCCcccEEEE
Q 027560 74 TVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~-~~~~~~--~f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~ 127 (222)
.+.+.|.+|+|..+.-. .+..+| ..+|++++.|.|.+.+.-....-.+.+..+.
T Consensus 42 ~l~v~V~~P~g~~~~~~v~d~~~gty~v~ytP~~~G~h~v~V~~~g~~I~GSPF~v~ 98 (112)
T 2d7p_A 42 VIDARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFKIR 98 (112)
T ss_dssp CEEEEEECSSSCBCCCEECSCBTTEEEEEECCSSCEEEEEEEEESSCBCTTCSEEEE
T ss_pred CEEEEEECCCCCeeeeEEEeCCCCeEEEEEEcCCCEeEEEEEEECCeEcCCCCEEEE
Confidence 89999999999754322 222344 4578889999999998765543223444443
No 16
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=90.73 E-value=2.3 Score=28.57 Aligned_cols=53 Identities=11% Similarity=0.154 Sum_probs=34.0
Q ss_pred eeEEEEECCCCCeEEeeecccee--eEEEEeeccceeeeeeeeCCCCCCcccEEEE
Q 027560 74 TVSAKVTSPYGNNLHHNENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~~~~~~~--~f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~ 127 (222)
.+.+.|.+|++..+.-. +..+| ..+|+++++|.|.+.+.-...+-.+.+..+.
T Consensus 38 ~l~v~v~~p~~~~~~v~-d~~dGty~v~Y~p~~~G~y~i~V~~~g~~I~gSPF~v~ 92 (97)
T 2bp3_A 38 GLSLAIEGPSKAEISCT-DNQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTAR 92 (97)
T ss_dssp EEEEEEEESSCCEEEEE-ECSSSEEEEEEECSSCEEEEEEEEETTEECTTCSEEEE
T ss_pred cEEEEEECCCCCEEEEE-ECCCCEEEEEEEeCCCCcEEEEEEECCEECCCcCEEEE
Confidence 88889999987554322 23345 4577888999999999754432223444444
No 17
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Probab=90.55 E-value=2.3 Score=28.47 Aligned_cols=43 Identities=16% Similarity=0.234 Sum_probs=29.1
Q ss_pred eeEEEEECCCCCeEE-eeeccceee--EEEEeeccceeeeeeeeCC
Q 027560 74 TVSAKVTSPYGNNLH-HNENVTHGQ--FAFTTTEAGNYMACFWLGS 116 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~-~~~~~~~~~--f~f~~~~~G~y~iCf~n~~ 116 (222)
.+.+.|.+|+|..+. +-.+..+|. .+|++++.|.|.+.+.-..
T Consensus 38 ~l~v~v~~p~~~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 83 (96)
T 1v05_A 38 MMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTVKEKGDYILIVKWGD 83 (96)
T ss_dssp CEEEEEECSSSCCSEEEEEECSTTEEEEEEECSSCEEEEEEEEETT
T ss_pred cEEEEEECCCCCeeEEEEEeCCCCEEEEEEEeCCCEEEEEEEEECC
Confidence 889999999985321 112223454 4678888999999887544
No 18
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=90.41 E-value=3.3 Score=28.93 Aligned_cols=66 Identities=14% Similarity=0.222 Sum_probs=40.2
Q ss_pred EEEEEeeCCCCCCCCeeEEEEECCCCCeEEeeecccee--eEEEEeeccceeeeeeeeCCCCCCcccEEEE
Q 027560 59 ADYYVIDEAHPEHPPTVSAKVTSPYGNNLHHNENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (222)
Q Consensus 59 ~~y~v~~~~~~~~~~~i~v~v~~p~g~~v~~~~~~~~~--~f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~ 127 (222)
..|.+...+.+. ..+.+.|.+|++-.+. -.+..+| ..+|++.++|.|.+.+.-...+-.+.+..+.
T Consensus 37 ~~F~v~t~dag~--~~l~v~v~~p~~~~~~-v~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~ 104 (119)
T 2k9u_A 37 AEFSIWTREAGA--GGLSIAVEGPSKAEIA-FEDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVVP 104 (119)
T ss_dssp EEEEEECCSSCS--EEEEEEEESSSCCEEE-EECCSSSEEEEEEECCSSEEEEEEEEETSCBCSSCSEEEE
T ss_pred EEEEEEECCCCC--CcEEEEEeCCCCCeEE-EEECCCCEEEEEEEECCCceEEEEEEECCEECCCCCEEEE
Confidence 345454333322 3899999999884432 2333455 4578889999999999755443333454443
No 19
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=90.25 E-value=0.7 Score=31.76 Aligned_cols=54 Identities=19% Similarity=0.154 Sum_probs=35.6
Q ss_pred eeEEEEECCCCCeEEee-eccceee--EEEEeeccceeeeeeeeCCCCCCcccEEEE
Q 027560 74 TVSAKVTSPYGNNLHHN-ENVTHGQ--FAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~-~~~~~~~--f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~ 127 (222)
.+.+.|.+|+|..+.-. .+..+|. .+|++++.|.|.+.+.-...+-.+.+..+.
T Consensus 32 ~l~v~v~~P~G~~~~~~v~d~~dGty~v~ytP~e~G~h~v~V~~~g~~I~GSPF~v~ 88 (102)
T 2dlg_A 32 DMSAHVTSPSGRVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQHVTGSPFQFT 88 (102)
T ss_dssp GCEEEEECTTSCEEECEEEECSSSEEEEEBCCCTTCEEEEEEESSSSBCSSCSEEEE
T ss_pred CEEEEEECCCCCEeeeEEEECCCCEEEEEEEecCCEeEEEEEEECCEeCCCCCeEEE
Confidence 89999999999765332 2233454 467889999999999755443223444443
No 20
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=89.74 E-value=3.3 Score=27.88 Aligned_cols=63 Identities=17% Similarity=0.196 Sum_probs=39.9
Q ss_pred CCcEEEEEEEEeeCCC-CCCCCeeEEEEECCCCCeEEeeecc--ceeeE--EEEee---ccceeeeeeeeC
Q 027560 53 SNVVVLADYYVIDEAH-PEHPPTVSAKVTSPYGNNLHHNENV--THGQF--AFTTT---EAGNYMACFWLG 115 (222)
Q Consensus 53 ~~~~i~~~y~v~~~~~-~~~~~~i~v~v~~p~g~~v~~~~~~--~~~~f--~f~~~---~~G~y~iCf~n~ 115 (222)
.|+.+.+..-+.+.+. +.....+.+.+.||+|+.+.++... ..|.+ +|..+ ..|.|++-....
T Consensus 15 PGetV~~~~~~~~~~~~p~~~~~~~v~l~dp~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~~ 85 (102)
T 2p9r_A 15 PGQTVKFRVVSMDENFHPLNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKK 85 (102)
T ss_dssp TTCEEEEEEEEECGGGCBCCCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECT
T ss_pred CCCEEEEEEEEECCCCcCCCCCceEEEEECCCCCEEEEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEEC
Confidence 4788887766654321 1222247899999999998775322 23444 44442 469999999754
No 21
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A
Probab=88.54 E-value=3.9 Score=27.17 Aligned_cols=53 Identities=13% Similarity=0.237 Sum_probs=33.8
Q ss_pred eeEEEEECCCCCeEEeeecccee--eEEEEeeccceeeeeeeeCCCCCCcccEEEE
Q 027560 74 TVSAKVTSPYGNNLHHNENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~~~~~~~--~f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~ 127 (222)
.+.+.|.+|++..+.-. +..+| ..+|++.++|.|.+.+.-...+-.+++..+.
T Consensus 35 ~~~v~v~gp~~~~~~v~-d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~ 89 (94)
T 2w0p_A 35 GLAIAVEGPSKAEISFE-DRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVP 89 (94)
T ss_dssp CEEEEEEESSCCEEEEE-ECTTSCEEEEEECSSCEEEEEEEEETTEECTTCSEEEE
T ss_pred cEEEEEECCCCCeEEEE-ECCCCEEEEEEEECCCceEEEEEEECCEECCCCCEEEE
Confidence 78888889988554322 23345 4578888999999999754433223444443
No 22
>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=87.08 E-value=2.3 Score=29.76 Aligned_cols=54 Identities=13% Similarity=0.241 Sum_probs=35.6
Q ss_pred eeEEEEECCCCCeEEee-ecccee--eEEEEeeccceeeeeeeeCCCCCCcccEEEE
Q 027560 74 TVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~-~~~~~~--~f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~ 127 (222)
.+.+.|.+|+|..+--. .+..+| ..+|++.+.|.|.+.+.-...+-.+.+..+.
T Consensus 46 ~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~e~G~h~v~V~~~g~~I~GSPF~v~ 102 (116)
T 2dmc_A 46 SLTASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNGNHVANSPVSIM 102 (116)
T ss_dssp TBCCEEECTTSCBCCEEEEEETTTEEEEEECCCSCEEEEEECBBSSSBCTTCSEEEE
T ss_pred CEEEEEECCCCCEEeeEEEeCCCCeEEEEEEeCCCeeEEEEEEECCEECCCCCeEEE
Confidence 88999999999754221 222244 4578889999999999755443234454444
No 23
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.82 E-value=3.6 Score=28.15 Aligned_cols=54 Identities=15% Similarity=0.211 Sum_probs=33.8
Q ss_pred eeEEEEECCCC--CeEE-eeeccceee--EEEEeeccceeeeeeeeCCCCCCcccEEEE
Q 027560 74 TVSAKVTSPYG--NNLH-HNENVTHGQ--FAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (222)
Q Consensus 74 ~i~v~v~~p~g--~~v~-~~~~~~~~~--f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~ 127 (222)
.+.+.|.+|++ ..+. +-.+..+|. .+|++.+.|.|.+++.-...+-.+.+..+.
T Consensus 50 ~~~v~i~~p~~~~~~~~~~v~D~~dGty~v~y~p~~~G~y~i~V~~~g~~i~gSPF~v~ 108 (113)
T 2ds4_A 50 NVQVAVVPKDKKDSPVRTMVQDNKDGTYYISYTPKEPGVYTVWVCIKEQHVQGSPFTVT 108 (113)
T ss_dssp CEEEEEEESSCSSCCCEEEEECCSSSEEEEEEECSSSEEEEEEEEESSCBCTTCSEEEE
T ss_pred eEEEEEEecCCCCceeEEEEEECCCCEEEEEEEeCCCeEEEEEEEECCEECCCCCEEEE
Confidence 78999999886 2221 222334554 467888999999999765543333444444
No 24
>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=86.69 E-value=6 Score=27.26 Aligned_cols=54 Identities=17% Similarity=0.288 Sum_probs=35.1
Q ss_pred eeEEEEECCCCCeEEeeecccee--eEEEEeeccceeeeeeeeCCCCCCcccEEEEE
Q 027560 74 TVSAKVTSPYGNNLHHNENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLGL 128 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~~~~~~~--~f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~f 128 (222)
.+.+.|.+|++-.+.- .+..+| ..+|+++++|.|.+.+.-...+-.+.+..+.+
T Consensus 43 ~l~v~v~gp~~~~~~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~v 98 (111)
T 2di8_A 43 GISLAVEGPSKVDIQT-EDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVKI 98 (111)
T ss_dssp CEEEEEESSSCCCEEC-CBCTTSCEEEEECCCSCSEEEEEEEESSCBCTTCSEEEEE
T ss_pred ceEEEEEcCCCceEEE-EECCCCEEEEEEEeCCCeEEEEEEEECCEECCCCCEEEEE
Confidence 7888899998754422 233455 45778889999999997554433344555443
No 25
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=86.47 E-value=2.9 Score=35.15 Aligned_cols=81 Identities=11% Similarity=0.111 Sum_probs=49.9
Q ss_pred eeeEEEEEcCCCcceeeEEcCC-----CcEEEEEEEEeeCCCCCCCCeeEEEEECCCCCeEEe---eeccceee--EEEE
Q 027560 32 TEAIWLQIPSSGTKCVSEEINS-----NVVVLADYYVIDEAHPEHPPTVSAKVTSPYGNNLHH---NENVTHGQ--FAFT 101 (222)
Q Consensus 32 ~~~l~f~i~~~~~~Cf~e~v~~-----~~~i~~~y~v~~~~~~~~~~~i~v~v~~p~g~~v~~---~~~~~~~~--f~f~ 101 (222)
...+.-...|++-+|+.--+.. |.. ..|.|-..+.|. ..+.+.|.+|+|..+.- ..+..+|. .+|+
T Consensus 245 ~~~l~~k~~pskv~a~GpGle~~g~~vg~p--~~F~Vdt~~AG~--g~l~v~V~~P~G~~~~~~v~~~~~~~gty~v~y~ 320 (347)
T 4b7l_A 245 GAPLKPKLNPKKARAYGRGIEPTGNMVKQP--AKFTVDTISAGQ--GDVMVFVEDPEGNKEEAQVTPDSDKNKTYSVEYL 320 (347)
T ss_dssp TCCCCCSCCGGGCEEESGGGSSSCCCTTSC--EEEEEECTTTCS--CCEEEEEECTTSCEEECEEEESSTTCSEEEEEEC
T ss_pred cccccccccccceeEEeccccccCceeCCE--EEEEEEeCCCCC--CceEEEEECCCCCeecCEEEEEcCCCCEEEEEEE
Confidence 3444445666677777766643 343 345554333332 28999999999976432 22333454 4788
Q ss_pred eeccceeeeeeeeCC
Q 027560 102 TTEAGNYMACFWLGS 116 (222)
Q Consensus 102 ~~~~G~y~iCf~n~~ 116 (222)
++++|.|.+-+.-..
T Consensus 321 P~~~G~~~I~V~~~g 335 (347)
T 4b7l_A 321 PKVTGLHKVTVLFAG 335 (347)
T ss_dssp CCSSSEEEEEEEETT
T ss_pred ECCCEeEEEEEEECC
Confidence 899999999886543
No 26
>2eec_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.96 E-value=7.3 Score=27.52 Aligned_cols=66 Identities=15% Similarity=0.292 Sum_probs=40.2
Q ss_pred EEEEeeCCCCCCCCeeEEEEECCCCCeEEeeecccee-eEEEEeeccceeeeeeeeCC-CCCCcccEEEEE
Q 027560 60 DYYVIDEAHPEHPPTVSAKVTSPYGNNLHHNENVTHG-QFAFTTTEAGNYMACFWLGS-NPQKVADATLGL 128 (222)
Q Consensus 60 ~y~v~~~~~~~~~~~i~v~v~~p~g~~v~~~~~~~~~-~f~f~~~~~G~y~iCf~n~~-~~~~~~~~~v~f 128 (222)
.|.+...+.+. ..+.+.|.+|++..+--. +..+| ..+|++.++|.|.+.+.-.. .+-.+.+..+.+
T Consensus 41 ~F~v~t~daG~--~~l~v~i~gp~~~~~~~~-d~~dGy~V~Y~P~~~G~y~I~V~~~g~~hI~gSPF~v~v 108 (125)
T 2eec_A 41 EFFINTTRAGP--GTLSVTIEGPSKVKMDCQ-ETPEGYKVMYTPMAPGNYLISVKYGGPNHIVGSPFKAKV 108 (125)
T ss_dssp EEEEECTTTCS--CCEEEEEESSSCCCCEEE-ECSSSEEEEECCSSCEEEEEEEEESSSCBCTTCSEEEEE
T ss_pred EEEEEEcCCCC--CcEEEEEECCCCCcceeE-ECCCCEEEEEEcCCCeEEEEEEEECCcccCCCCCeEEEE
Confidence 35555433333 289999999998654322 23345 44677789999999987554 332334544443
No 27
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=85.82 E-value=6.4 Score=26.75 Aligned_cols=53 Identities=11% Similarity=0.186 Sum_probs=33.8
Q ss_pred eeEEEEECCCCCeEEeeecccee--eEEEEeeccceeeeeeeeCCCCCCcccEEEE
Q 027560 74 TVSAKVTSPYGNNLHHNENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~~~~~~~--~f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~ 127 (222)
.+.+.|.+|++..+.-.+ ..+| ..+|++..+|.|.+.+.-...+-.+.+..+.
T Consensus 43 ~l~v~v~gp~~~~~~v~d-~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~ 97 (105)
T 2dic_A 43 GLGITVEGPSESKINCRD-NKDGSCSAEYIPFAPGDYDVNITYGGAHIPGSPFRVP 97 (105)
T ss_dssp CEEEEEESSSCCCCEEEE-CSSSCEEEEECCSSCEEEEEEEEETTEECTTCSEEEE
T ss_pred ceEEEEECCCCCeEEEEE-CCCCeEEEEEEeCCCeEEEEEEEECCEECCCCCEEEE
Confidence 788899999875443222 3345 4577888899999999754433223444433
No 28
>4g9s_B Inhibitor of G-type lysozyme, goose-type lysozyme; hydrolase inhibitor, hydrolase-hydrolase inhibitor; HET: FLC; 0.95A {Escherichia coli} PDB: 4dy3_A* 4dxz_A* 4dy5_A
Probab=85.68 E-value=3.4 Score=28.58 Aligned_cols=90 Identities=10% Similarity=0.007 Sum_probs=57.9
Q ss_pred eeEEEEEcCCCcceeeEEcCCCcEEEEEEEEeeCCCCCCCCeeEEEEECCCCCeEEee---eccceeeEEEEeeccceee
Q 027560 33 EAIWLQIPSSGTKCVSEEINSNVVVLADYYVIDEAHPEHPPTVSAKVTSPYGNNLHHN---ENVTHGQFAFTTTEAGNYM 109 (222)
Q Consensus 33 ~~l~f~i~~~~~~Cf~e~v~~~~~i~~~y~v~~~~~~~~~~~i~v~v~~p~g~~v~~~---~~~~~~~f~f~~~~~G~y~ 109 (222)
..+.=.|.+++...+...+.+|+.+.+.. . . + ...+.|..|.+...... ......+++.+.+.+|.|+
T Consensus 16 a~v~G~I~g~~~~~Y~~~a~aGQ~l~v~l--~-s---~---~~~~~i~~pg~~~~~~~~~~~~~~~~~~~~~LP~sG~Y~ 86 (111)
T 4g9s_B 16 AQYSGEIKGYDYDTYTFYAKKGQKVHVSI--S-N---E---GADTYLFGPGIDDSVDLSRYSPELDSHGQYSLPASGKYE 86 (111)
T ss_dssp EEEEEEEETTCCEEEEEEECTTCEEEEEE--S-C---T---TCEEEEECTTCSSCEECSTTCTTCCTTSCEECSSSEEEE
T ss_pred eEEEEEEeCCCceEEEEEecCCCEEEEEE--e-c---C---CccEEEECCCCccccccccccccCCceEEEEecCCccEE
Confidence 44555799999999999999999888764 2 1 1 44566888876543222 1222456788899999999
Q ss_pred eeeeeCCC-CCCcccEEEEEEEE
Q 027560 110 ACFWLGSN-PQKVADATLGLDWR 131 (222)
Q Consensus 110 iCf~n~~~-~~~~~~~~v~f~i~ 131 (222)
+=+..... ...++.....+++.
T Consensus 87 I~V~~~r~~ar~~~~~~Y~L~v~ 109 (111)
T 4g9s_B 87 LRVLQTRNDARKNKTKKYNVDIQ 109 (111)
T ss_dssp EEEECCHHHHHTTCEEEEEEEEE
T ss_pred EEEEeccchhccCCCcCEEEEEE
Confidence 99864321 01123445555544
No 29
>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=85.61 E-value=3.2 Score=28.70 Aligned_cols=54 Identities=15% Similarity=0.227 Sum_probs=34.5
Q ss_pred eeEEEEECCCCCeEEeeeccceee--EEEEeeccceeeeeeeeCCCCCCcccEEEEE
Q 027560 74 TVSAKVTSPYGNNLHHNENVTHGQ--FAFTTTEAGNYMACFWLGSNPQKVADATLGL 128 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~~~~~~~~--f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~f 128 (222)
.+.+.|.+|++..+ +-.+..+|. .+|++.++|.|.+.+.-...+-.+.+..+.+
T Consensus 43 ~l~v~v~gp~~~~~-~v~d~~dGty~V~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~v 98 (111)
T 2d7o_A 43 GLSLAVEGPSKAEI-TCKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAKI 98 (111)
T ss_dssp CBCCEEESSSCCCB-CCCCCSSSEEEEEECCSSCEEEEEECBBSSCBCTTCSEEEEE
T ss_pred cEEEEEECCCCceE-EEEECCCCEEEEEEEeCCCeEEEEEEEECCEECCCcCEEEEE
Confidence 78888899986543 222334564 5678889999999997544332334544443
No 30
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=83.57 E-value=9.1 Score=28.95 Aligned_cols=53 Identities=11% Similarity=0.154 Sum_probs=35.0
Q ss_pred eeEEEEECCCCCeEEeeecccee--eEEEEeeccceeeeeeeeCCCCCCcccEEEE
Q 027560 74 TVSAKVTSPYGNNLHHNENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~~~~~~~--~f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~ 127 (222)
.+.+.|.+|++..+.-. +..+| ..+|++...|.|.+++.-...+-.+.+..+.
T Consensus 129 ~l~v~I~gp~~~~~~~~-d~~dGty~v~Y~p~~~G~y~i~V~~~g~~I~gSPF~v~ 183 (188)
T 2k7p_A 129 GLSLAIEGPSKAEISCT-DNQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTAR 183 (188)
T ss_dssp CEEEEEECSSCCEEEEE-ECTTSEEEEEEECCSSEEEEEEEEETTEECTTCSEEEE
T ss_pred CeEEEEeCCCCCeEEEE-ECCCCEEEEEEEeCCCEEEEEEEEECCEECCCCCEEEE
Confidence 78899999988554322 23356 5688889999999999754432223344444
No 31
>2dib_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=81.90 E-value=3 Score=29.51 Aligned_cols=54 Identities=15% Similarity=0.205 Sum_probs=34.6
Q ss_pred eeEEEEECCCCCeEEee-eccceee--EEEEeeccceeeeeeeeCCCCCCcccEEEE
Q 027560 74 TVSAKVTSPYGNNLHHN-ENVTHGQ--FAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~-~~~~~~~--f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~ 127 (222)
.+.+.|.+|+|..+.-. .+..+|. .+|++.+.|.|++.+.-....-...+..+.
T Consensus 58 ~~~v~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~~~i~V~~~g~~I~gSPF~v~ 114 (128)
T 2dib_A 58 HIKAHIANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPFKVA 114 (128)
T ss_dssp CCCEECCCSSSCCCCCEEEECSSSEEEEEECCSSCSEEEEEEBSSSCBCTTCSEEEE
T ss_pred cEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCEeEEEEEEECCEECCCCCEEEE
Confidence 78899999998643221 2233454 467788999999999765443223444444
No 32
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=80.85 E-value=6.2 Score=26.95 Aligned_cols=70 Identities=17% Similarity=0.209 Sum_probs=46.9
Q ss_pred EEEcCCCcceeeEEcCCCcEEEEEEEEeeCCCCCCCCeeEEEEECC-CCCeEEeeeccceeeEEEEe--eccceeeeeee
Q 027560 37 LQIPSSGTKCVSEEINSNVVVLADYYVIDEAHPEHPPTVSAKVTSP-YGNNLHHNENVTHGQFAFTT--TEAGNYMACFW 113 (222)
Q Consensus 37 f~i~~~~~~Cf~e~v~~~~~i~~~y~v~~~~~~~~~~~i~v~v~~p-~g~~v~~~~~~~~~~f~f~~--~~~G~y~iCf~ 113 (222)
+-+.|-.++|-+.+ | .+.+.|.-. .+.+.+.|.|- .|+.+|+.....-...++.. ..+|+|.+=+.
T Consensus 20 I~i~P~~~~~A~I~---n-vlsV~F~~~-------~~~vTItItNe~TG~~VYs~~~s~p~~i~IdLnge~sG~Y~IeI~ 88 (101)
T 3sd2_A 20 IPIQPTYEKCAILS---N-ILNVSFGRA-------KDYAIITVTNKATGEIVHSKTYHNTSIVMIDMSSCEKGEYTIHII 88 (101)
T ss_dssp CCCCCSSEEEEEET---T-EEEEEESSC-------CSCEEEEEEETTTCCEEEEEEESSCSEEEEECTTSCSEEEEEEEE
T ss_pred eeecccccccEEEe---C-EEEEEeccC-------CCcEEEEEEECCCCcEEEEEeccCCcEEEEEcCCCcCceEEEEEE
Confidence 44555556777765 5 777777321 23899999986 79999987544333455544 45899999887
Q ss_pred eCCC
Q 027560 114 LGSN 117 (222)
Q Consensus 114 n~~~ 117 (222)
.+..
T Consensus 89 ~~~~ 92 (101)
T 3sd2_A 89 LNDC 92 (101)
T ss_dssp ETTE
T ss_pred eCCc
Confidence 5543
No 33
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=80.06 E-value=13 Score=28.42 Aligned_cols=43 Identities=14% Similarity=0.271 Sum_probs=31.2
Q ss_pred eeEEEEECCCCCeEE-eeecccee--eEEEEeeccceeeeeeeeCCC
Q 027560 74 TVSAKVTSPYGNNLH-HNENVTHG--QFAFTTTEAGNYMACFWLGSN 117 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~-~~~~~~~~--~f~f~~~~~G~y~iCf~n~~~ 117 (222)
.+.+.|.+|+| .+. .-.+..+| ..+|++.+.|.|.+++.-...
T Consensus 136 ~l~v~i~~p~g-~~~~~v~d~~dGty~v~y~p~~~G~y~v~V~~~g~ 181 (212)
T 1qfh_A 136 KFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGK 181 (212)
T ss_dssp CEEEEEEECCS-EEEEEEEECSSSEEEEEEEEESSEEEEEEEEETTE
T ss_pred cEEEEEECCCC-ceeeEEEECCCCEEEEEEEcCCCEEEEEEEEECCE
Confidence 89999999998 332 21233456 557888999999999976543
No 34
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=79.83 E-value=6.4 Score=27.25 Aligned_cols=55 Identities=9% Similarity=0.018 Sum_probs=38.9
Q ss_pred CcEEEEEEEEeeCCCCCCCCeeEEEEE-CCCCCeEEeeeccce--eeEEEEe--eccceeeeeeeeC
Q 027560 54 NVVVLADYYVIDEAHPEHPPTVSAKVT-SPYGNNLHHNENVTH--GQFAFTT--TEAGNYMACFWLG 115 (222)
Q Consensus 54 ~~~i~~~y~v~~~~~~~~~~~i~v~v~-~p~g~~v~~~~~~~~--~~f~f~~--~~~G~y~iCf~n~ 115 (222)
|..+.+.|.. . .+++.+.|+ +..|+++|+..-... ..+.+.. ..+|.|.+=+.+.
T Consensus 37 ~~~L~I~F~~--~-----~~~vtItI~~~~tG~iVY~~~v~~~~~~~~~I~L~~~~~G~Y~L~i~~~ 96 (108)
T 3d33_A 37 GYLLTLKNAS--P-----DRDMTIRITDMAKGGVVYENDIPEVQSAYITISIANFPAEEYKLEITGT 96 (108)
T ss_dssp TTEEEEEESS--C-----CSEEEEEEEETTTCCEEEEEEECGGGTTEEEEECTTSCSEEEEEEEEEE
T ss_pred CCEEEEEECC--c-----CCCEEEEEEECCCCcEEEEEeecCCCCcEEEEEcCCccCceEEEEEEeC
Confidence 5677777722 1 139999999 889999998754332 3455555 4689999999876
No 35
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=78.73 E-value=5.3 Score=30.28 Aligned_cols=43 Identities=16% Similarity=0.265 Sum_probs=31.4
Q ss_pred eeEEEEECCCCCeEEee-ecccee--eEEEEeeccceeeeeeeeCC
Q 027560 74 TVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFWLGS 116 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~-~~~~~~--~f~f~~~~~G~y~iCf~n~~ 116 (222)
.+.+.|.+|+|+...-. .+..+| ..+|++.+.|.|++.+....
T Consensus 35 ~v~~~v~~PsG~~~~~~v~d~~dgty~v~y~P~~~G~h~i~V~~~g 80 (188)
T 2k7p_A 35 EITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDN 80 (188)
T ss_dssp CEEEEEECTTSCEECCEEEECSSSEEEEEECCCCCEEEEEEEEETT
T ss_pred eEEEEEECCCCCccccEEEeCCCCEEEEEEEccccEeEEEEEEECC
Confidence 89999999999865321 223345 45778889999999997654
No 36
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=78.60 E-value=13 Score=26.18 Aligned_cols=38 Identities=3% Similarity=-0.076 Sum_probs=24.3
Q ss_pred CCcEEEEEEEEeeCCC-------CCCCCeeEEEEECCCCCeEEeee
Q 027560 53 SNVVVLADYYVIDEAH-------PEHPPTVSAKVTSPYGNNLHHNE 91 (222)
Q Consensus 53 ~~~~i~~~y~v~~~~~-------~~~~~~i~v~v~~p~g~~v~~~~ 91 (222)
+|..+.+.+.+..... +..+ ..++.|+|++|+.++.+.
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq-~~Df~v~d~~G~~VwrwS 60 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQ-KFELVVYDSEHKERYRYS 60 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSC-CEEEEEECTTCCEEEETT
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCC-EEEEEEECCCCCEEEEcc
Confidence 3455555555553211 1234 889999999999998653
No 37
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=78.16 E-value=9.3 Score=28.88 Aligned_cols=53 Identities=17% Similarity=0.349 Sum_probs=34.3
Q ss_pred eeEEEEECCCCCeEEeeecccee--eEEEEeeccceeeeeeeeCCCCCCcccEEEE
Q 027560 74 TVSAKVTSPYGNNLHHNENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~~~~~~~--~f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~ 127 (222)
.+.+.|.+|++..+. -.+..+| ..+|++.++|.|.+++.-...+-.+.+..+.
T Consensus 129 ~l~v~V~gp~~~~~~-v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~I~gSPF~v~ 183 (191)
T 2k7q_A 129 GLSLSIEGPSKVDIN-TEDLEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVK 183 (191)
T ss_dssp EEEEEEEESSCEEEE-EEECTTSCEEEEEEESSCEEEEEEEEETTEECTTCSEEEE
T ss_pred ceEEEEECCCCceEE-EEECCCCEEEEEEEeCCCceEEEEEEECCEECCCCCEEEE
Confidence 788889999875432 2233345 5688889999999999755433223344443
No 38
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=76.49 E-value=25 Score=31.52 Aligned_cols=62 Identities=16% Similarity=0.237 Sum_probs=40.4
Q ss_pred CCcEEEEEEEEeeCCC-CCCCCeeEEEEECCCCCeEEeeecc-ceeeEEEE--e---eccceeeeeeeeC
Q 027560 53 SNVVVLADYYVIDEAH-PEHPPTVSAKVTSPYGNNLHHNENV-THGQFAFT--T---TEAGNYMACFWLG 115 (222)
Q Consensus 53 ~~~~i~~~y~v~~~~~-~~~~~~i~v~v~~p~g~~v~~~~~~-~~~~f~f~--~---~~~G~y~iCf~n~ 115 (222)
.|+.+++..-+.+.+. +.+ ..+.+.|.||+|+.+.++.-. ..|-|++. . ...|.|++-+...
T Consensus 133 PGqtV~~r~i~~d~~~~p~~-~~~~v~i~dp~g~~v~~~~~~~~~G~~~~~f~Lp~~~~~G~w~i~v~~~ 201 (656)
T 4fxk_A 133 PGQRVRYRVFALDQKMRPST-DTITVMVENSHGLRVRKKEVYMPSSIFQDDFVIPDISEPGTWKISARFS 201 (656)
T ss_dssp TTCEEEEEEEEECSSSSBCC-CCEEEEEECTTCCEEEEEEECCTTSEEEEEEECCTTCCSEEEEEEEEES
T ss_pred CCCEEEEEEEEECCccCcCc-ccceEEEECCCCcEEeeeEEecCCceEEEEecCCCCCCCcCEEEEEEEc
Confidence 3787776655555432 222 389999999999998776422 24555443 3 2469999998754
No 39
>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=75.63 E-value=19 Score=25.48 Aligned_cols=53 Identities=11% Similarity=0.206 Sum_probs=34.6
Q ss_pred eeEEEEECCCCCeEEeeeccceee--EEEEeeccceeeeeeeeCCCCCCcccEEEE
Q 027560 74 TVSAKVTSPYGNNLHHNENVTHGQ--FAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~~~~~~~~--f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~ 127 (222)
.+.+.|.+|++..+.- .+..+|. .+|+++++|.|.+.+.-...+-.+.+..+.
T Consensus 63 ~l~v~v~gp~~~~~~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~ 117 (131)
T 2di9_A 63 GLGLTVEGPCEAKIEC-SDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKAD 117 (131)
T ss_dssp CEEEEECSSSCCEEEE-EECSSSEEEEEEECSSSSEEEEEEEESSCBCTTCSEEEE
T ss_pred eeEEEEEecCCceEEE-EECCCCEEEEEEEeCCCeeEEEEEEECCEECCCcCEEEE
Confidence 7888999998854422 2233454 578888999999999755443233454444
No 40
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=73.63 E-value=11 Score=30.81 Aligned_cols=53 Identities=11% Similarity=0.147 Sum_probs=35.0
Q ss_pred eeEEEEECCCCCeEEee-eccceee--EEEEeeccceeeeeeeeCCCCCCcccEEEE
Q 027560 74 TVSAKVTSPYGNNLHHN-ENVTHGQ--FAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~-~~~~~~~--f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~ 127 (222)
.+.+.|.+|+| .+.-. .+..+|. .+|++.+.|.|.+++.-....-.+.+..+.
T Consensus 235 ~l~v~i~~p~g-~~~~~v~d~~~G~y~v~y~p~~~G~y~i~V~~~g~~I~gsPf~v~ 290 (311)
T 1wlh_A 235 KFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGKHIEGSPFKQV 290 (311)
T ss_dssp CEEEEEESCCS-EEEEEEEECSSSEEEEEEEEECSEEEEEEEEETTEECTTCSEEEE
T ss_pred cEEEEEECCCC-CceeEEEECCCCEEEEEEECCCCEeEEEEEEECCEECCCCCEEEE
Confidence 78999999998 44322 2334565 588889999999999765543223344443
No 41
>3osv_A Flagellar basal-BODY ROD modification protein FLG; FLGD, flagellum, P. aeruginosa, structural protein; 2.35A {Pseudomonas aeruginosa}
Probab=72.09 E-value=18 Score=25.87 Aligned_cols=56 Identities=14% Similarity=0.077 Sum_probs=37.9
Q ss_pred cEEEEEEEEeeCCCCCCCCeeEEEEECCCCCeEEeee--ccceeeEEEEee---------ccceeeeeeeeC
Q 027560 55 VVVLADYYVIDEAHPEHPPTVSAKVTSPYGNNLHHNE--NVTHGQFAFTTT---------EAGNYMACFWLG 115 (222)
Q Consensus 55 ~~i~~~y~v~~~~~~~~~~~i~v~v~~p~g~~v~~~~--~~~~~~f~f~~~---------~~G~y~iCf~n~ 115 (222)
....+.|.+..+ . +.+.+.|+|.+|++|++.. ..+.|.+.|.-. .+|.|++-+...
T Consensus 24 ~~~~~~~~l~~~----a-~~v~v~I~d~~G~~V~t~~~g~~~aG~~~f~WDG~d~~G~~~~~G~Y~~~v~a~ 90 (138)
T 3osv_A 24 DTFKASLNLPVS----S-SNVWVNVYDDKGTVVNRINLGQQAAGSVSFMWDGKDSSGNIMPPGTYKFEAQTS 90 (138)
T ss_dssp SCEEEEEEESBC----E-EEEEEEEECTTSCEEEEEEEEEECSEEEEEEECSBCTTSCBCCSEEEEEEEEEE
T ss_pred CeEEEEEECCCC----C-cEEEEEEEcCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCccEEEEEEEE
Confidence 346677777432 2 2899999999999998753 234566666442 258899888654
No 42
>1gl2_D Syntaxin 8, vesicle transport V-snare protein VTI1-like 1; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Rattus norvegicus} SCOP: h.1.15.1
Probab=71.45 E-value=15 Score=22.55 Aligned_cols=46 Identities=13% Similarity=0.143 Sum_probs=38.2
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 027560 146 DKIEGVELHLKRLEAQVQSIHENLLFLKHREAEMREVSEVTNSRVA 191 (222)
Q Consensus 146 e~l~~l~~~l~~l~~~l~~I~~eq~~~~~re~~~~~~~est~~rv~ 191 (222)
++++.+...+.++......|.+|.+.+...-++.....+++..++-
T Consensus 9 ~~Ld~L~~~v~~lk~~a~~Ig~El~~Qn~lLd~l~~~~d~~~~~l~ 54 (65)
T 1gl2_D 9 AGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLR 54 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999999998888877777777777776653
No 43
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=68.38 E-value=7.6 Score=33.63 Aligned_cols=43 Identities=21% Similarity=0.447 Sum_probs=36.3
Q ss_pred CeeEEEEECCCCCeEEeeeccceeeEEEEeeccceeeeeeeeC
Q 027560 73 PTVSAKVTSPYGNNLHHNENVTHGQFAFTTTEAGNYMACFWLG 115 (222)
Q Consensus 73 ~~i~v~v~~p~g~~v~~~~~~~~~~f~f~~~~~G~y~iCf~n~ 115 (222)
+++.|.+++|+|.++....=...|.|.|.--.+|.|.+-|..+
T Consensus 330 ~gv~v~L~d~~G~~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P 372 (429)
T 3irp_X 330 AGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLVEFVMP 372 (429)
T ss_dssp TTCEEEEECTTSCEEEEEECCTTSEEEEEEEESEEEEEEECCC
T ss_pred CCeEEEEEcCCCCEEEEEEeCCCCeEEeCCCCCCcEEEEEECC
Confidence 4899999999999876655456899999998999999999654
No 44
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=68.14 E-value=16 Score=21.66 Aligned_cols=28 Identities=7% Similarity=0.056 Sum_probs=19.6
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 027560 147 KIEGVELHLKRLEAQVQSIHENLLFLKH 174 (222)
Q Consensus 147 ~l~~l~~~l~~l~~~l~~I~~eq~~~~~ 174 (222)
+++.+...++.|..++..+..+...++.
T Consensus 5 ki~~Lss~V~~L~~kVdqLssdV~al~~ 32 (52)
T 1jcd_A 5 KADQASSDAQTANAKADQASNDANAARS 32 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777777777777777777666554
No 45
>2nps_D Syntaxin-6; vesicle fusion, snare complex, early endosomal snare complex, VTI1A, VAMP4, transport protein; 2.50A {Homo sapiens}
Probab=66.84 E-value=23 Score=22.88 Aligned_cols=47 Identities=21% Similarity=0.123 Sum_probs=37.9
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 027560 145 KDKIEGVELHLKRLEAQVQSIHENLLFLKHREAEMREVSEVTNSRVA 191 (222)
Q Consensus 145 ~e~l~~l~~~l~~l~~~l~~I~~eq~~~~~re~~~~~~~est~~rv~ 191 (222)
.++++.+...+.++......|.+|.+.....-+..-..++++..++-
T Consensus 18 D~~Ld~L~~~v~~LK~~a~~Ig~El~~Qn~lLd~l~~~~d~~~~~L~ 64 (82)
T 2nps_D 18 DEQLELVSGSIGVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLD 64 (82)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45788999999999999999999988887777777777777766653
No 46
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=66.00 E-value=24 Score=24.84 Aligned_cols=17 Identities=41% Similarity=0.655 Sum_probs=11.9
Q ss_pred eeEEEEeeccceee-eee
Q 027560 96 GQFAFTTTEAGNYM-ACF 112 (222)
Q Consensus 96 ~~f~f~~~~~G~y~-iCf 112 (222)
..++++..++|.|. .|-
T Consensus 103 ~t~~~tF~~~G~y~y~C~ 120 (132)
T 3c75_A 103 QAYAITFNEAGSYDYFCT 120 (132)
T ss_dssp EEEEEEECSCEEEEEECS
T ss_pred CEEEEEcCCCEEEEEEeC
Confidence 45666667899998 453
No 47
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=65.90 E-value=23 Score=32.04 Aligned_cols=61 Identities=15% Similarity=0.139 Sum_probs=35.3
Q ss_pred CcEEEEEEEEeeCCC-CCCCCeeEEEEECCCCCeEEeeeccceeeEEEEee---ccceeeeeeeeC
Q 027560 54 NVVVLADYYVIDEAH-PEHPPTVSAKVTSPYGNNLHHNENVTHGQFAFTTT---EAGNYMACFWLG 115 (222)
Q Consensus 54 ~~~i~~~y~v~~~~~-~~~~~~i~v~v~~p~g~~v~~~~~~~~~~f~f~~~---~~G~y~iCf~n~ 115 (222)
|+.+....-+.+.+. +.+ ..+.+.|.||+|+.+.++.-...-.++|..+ ..|.|++.....
T Consensus 118 GqtV~~r~i~~d~~~~p~~-~~~~v~i~dP~g~~i~~~~~~~~~~~~f~Lp~~~~~G~w~i~v~~~ 182 (627)
T 3hrz_A 118 GSPVLYRVFSMDHNTSKMN-KTVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYE 182 (627)
T ss_dssp TCEECEEEEESCC--------CEEEEEECTTCCEEEEEEEBTTBCCCEECCSSCCCEEEEEEEEET
T ss_pred CCEEEEEEEEECCCCcccC-ccEEEEEECCCCCEEEEEEeccceEEEEECCCCCCCeeEEEEEEEC
Confidence 666665554443321 122 3899999999999988643222122334333 469999988754
No 48
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=65.22 E-value=28 Score=31.37 Aligned_cols=61 Identities=15% Similarity=0.287 Sum_probs=39.2
Q ss_pred CcEEEEEEEEeeCCC-CCCCCeeEEEEECCCCCeEEeeecc---ceeeE--EEEee---ccceeeeeeeeC
Q 027560 54 NVVVLADYYVIDEAH-PEHPPTVSAKVTSPYGNNLHHNENV---THGQF--AFTTT---EAGNYMACFWLG 115 (222)
Q Consensus 54 ~~~i~~~y~v~~~~~-~~~~~~i~v~v~~p~g~~v~~~~~~---~~~~f--~f~~~---~~G~y~iCf~n~ 115 (222)
|+.+++..-+.+.+. +.. ..+.+.|.||+|+.+.+..-. ..|.| +|..+ ..|.|++-+...
T Consensus 120 GqtV~~r~i~~d~~~~p~~-~~v~v~l~dP~g~~i~~~~~~~~~~~G~~~~~f~Lp~~~~~G~w~I~v~~~ 189 (645)
T 2hr0_A 120 GSTVLYRIFTVNHKLLPVG-RTVMVNIENPEGIPVKQDSLSSQNQLGVLPLSWDIPELVNMGQWKIRAYYE 189 (645)
T ss_dssp TSEEEEEEEEECTTSCBCC-CEEEEEEECTTSCEEEEEEEECTTTTTEEEEEEECCSSCCCSEEEEEEEET
T ss_pred CCEEEEEEEEECCCCcccC-ceEEEEEECCCCCEEEEEEeeccccCCeEEEEEECCCccccccEEEEEEEC
Confidence 677776665554332 222 389999999999998764322 34544 34333 469999998753
No 49
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=64.52 E-value=17 Score=25.94 Aligned_cols=42 Identities=19% Similarity=0.218 Sum_probs=31.4
Q ss_pred eeEEEEECCCCCeEEeee--ccceeeEEEEee---------ccceeeeeeeeC
Q 027560 74 TVSAKVTSPYGNNLHHNE--NVTHGQFAFTTT---------EAGNYMACFWLG 115 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~~--~~~~~~f~f~~~---------~~G~y~iCf~n~ 115 (222)
.+.+.|+|.+|+++++-+ ..+.|.+.|.-. .+|.|++.+...
T Consensus 40 ~v~v~I~d~~G~~V~t~~~~~~~aG~~~~~WDg~d~~G~~~~~G~Y~~~v~a~ 92 (138)
T 3c12_A 40 FVNFEITDANGTFVKQLSVPASAAGEVSFAWDGTDANGNRMAAGKYGITATQT 92 (138)
T ss_dssp EEEEEEECSSCCEEEEEEEEESSSEEEEEEECSBCTTSCBCCSEEEEEEEEEE
T ss_pred EEEEEEEeCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCceEEEEEEEE
Confidence 899999999999998754 244566666542 268999999754
No 50
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=62.64 E-value=13 Score=28.42 Aligned_cols=43 Identities=16% Similarity=0.337 Sum_probs=30.0
Q ss_pred eeEEEEECCCCCeEEee-eccceeeE--EEEeeccceeeeeeeeCC
Q 027560 74 TVSAKVTSPYGNNLHHN-ENVTHGQF--AFTTTEAGNYMACFWLGS 116 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~-~~~~~~~f--~f~~~~~G~y~iCf~n~~ 116 (222)
.+.+.|.+|+|..+.-. .+..+|.| +|++.+.|.|.+-+.-..
T Consensus 45 ~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~~~i~V~~~g 90 (212)
T 1qfh_A 45 PFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRG 90 (212)
T ss_dssp CEEEEEECGGGCEECCEEEECSSSEEEEEECCCSSEEEEEEEEETT
T ss_pred eEEEEEECCCCCEeeeEEEECCCcEEEEEEECcCcEEEEEEEEECC
Confidence 79999999998654222 22334544 677788999999987544
No 51
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=62.63 E-value=17 Score=27.38 Aligned_cols=43 Identities=19% Similarity=0.305 Sum_probs=31.1
Q ss_pred eeEEEEECCCCCeEEee-ecccee--eEEEEeeccceeeeeeeeCC
Q 027560 74 TVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFWLGS 116 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~-~~~~~~--~f~f~~~~~G~y~iCf~n~~ 116 (222)
.+.+.|.+|+|+.+.-. .+..+| ..+|++++.|.|.+-+....
T Consensus 32 ~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~~~G~~~i~V~~~g 77 (191)
T 2k7q_A 32 LLTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNG 77 (191)
T ss_dssp SEEEEEECTTSCCEECEEEECTTSCEEEECCCSSSEEEEEEEEETT
T ss_pred cEEEEEECCCCCEEeeEEEECCCCEEEEEEEccCCEeEEEEEEECC
Confidence 89999999999864322 222334 45788899999998887654
No 52
>2k8e_A UPF0339 protein YEGP; protein structure initiative (PSI), northeast structur genomics consortium (NESG), ontario centre for structural P (OCSP); NMR {Escherichia coli} SCOP: d.348.1.1 d.348.1.1
Probab=60.56 E-value=28 Score=24.77 Aligned_cols=63 Identities=10% Similarity=0.161 Sum_probs=43.7
Q ss_pred EcCCCcEEEEEEEEeeCCCCCCCCeeEEEEECCCCCeEEeeecc------------------ceeeEEEEeeccceeeee
Q 027560 50 EINSNVVVLADYYVIDEAHPEHPPTVSAKVTSPYGNNLHHNENV------------------THGQFAFTTTEAGNYMAC 111 (222)
Q Consensus 50 ~v~~~~~i~~~y~v~~~~~~~~~~~i~v~v~~p~g~~v~~~~~~------------------~~~~f~f~~~~~G~y~iC 111 (222)
+..+|....+.|++..+. + ...++.++.++|+++..++.- ....|.......|+|.+-
T Consensus 10 ~~~~~~~Mag~FEi~~~~---~-G~~rfrLka~NGeiI~sSe~Y~sk~~a~~gI~sVk~na~~a~~fE~~~~~~G~~~f~ 85 (130)
T 2k8e_A 10 NFNQGVIMAGWFELSKSS---D-NQFRFVLKAGNGETILTSELYTSKTSAEKGIASVRSNSPQEERYEKKTASNGKFYFN 85 (130)
T ss_dssp ----CCCCCCEEEEEECT---T-CCEEEEEECTTSCEEEECCCBSSHHHHHHHHHHHHHSSSCTTTEEEEEETTTEEEEE
T ss_pred ccCccceeeeeEEEEEcC---C-CCEEEEEEeCCCCEEEEcCCcCCHHHHHHHHHHHHhhccccchheeeeccCCCEEEE
Confidence 344565566788887542 1 279999999999998765421 235788888889999999
Q ss_pred eeeCC
Q 027560 112 FWLGS 116 (222)
Q Consensus 112 f~n~~ 116 (222)
+...+
T Consensus 86 Lka~N 90 (130)
T 2k8e_A 86 LKAAN 90 (130)
T ss_dssp EECTT
T ss_pred EEeCC
Confidence 97654
No 53
>3jqw_A COLH protein, collagenase; beta-barrel, dual calcium site, cell adhesion; 2.00A {Clostridium histolyticum} SCOP: b.23.2.0 PDB: 3jqx_A
Probab=60.37 E-value=41 Score=23.54 Aligned_cols=69 Identities=12% Similarity=0.056 Sum_probs=47.9
Q ss_pred CCCcceeeEEcCCCcEEEEEEEEeeCCCCCCCCeeEEEEECCCCCeEEeeecc-ceeeEEEEeeccceeeeeeeeC
Q 027560 41 SSGTKCVSEEINSNVVVLADYYVIDEAHPEHPPTVSAKVTSPYGNNLHHNENV-THGQFAFTTTEAGNYMACFWLG 115 (222)
Q Consensus 41 ~~~~~Cf~e~v~~~~~i~~~y~v~~~~~~~~~~~i~v~v~~p~g~~v~~~~~~-~~~~f~f~~~~~G~y~iCf~n~ 115 (222)
......|..++++...+.+++.-.. .. ++...+++.+++.+...... ..-.-+|.+.++|.|.+.+..-
T Consensus 35 ~dd~D~y~F~V~~~g~v~I~l~~~~-----~~-~~~w~ly~~~~nyv~y~~~~gn~~~~~~~~~~pGkYYl~Vy~y 104 (121)
T 3jqw_A 35 TSDQDYFYFDVITPGEVKIDINKLG-----YG-GATWVVYDENNNAVSYATDDGQNLSGKFKADKPGRYYIHLYMF 104 (121)
T ss_dssp TTCCEEEEEEESSCEEEEEEEEECS-----SS-EEEEEEECTTSCEEEECEECSSEEEEEEEECSCEEEEEEEEEE
T ss_pred cCCeeEEEEEeCCCCeEEEEEEecC-----CC-cEEEEEEeCCCCeEEEeccCCCEEEEEEEeCCCeeEEEEEEEe
Confidence 4568999999999888888775532 12 89999998877666443311 1122345666899999999863
No 54
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=58.14 E-value=58 Score=26.06 Aligned_cols=42 Identities=19% Similarity=0.387 Sum_probs=29.3
Q ss_pred eeEEEEECCCCCeEEeeeccceee--EEEEeeccceeeeeeeeCC
Q 027560 74 TVSAKVTSPYGNNLHHNENVTHGQ--FAFTTTEAGNYMACFWLGS 116 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~~~~~~~~--f~f~~~~~G~y~iCf~n~~ 116 (222)
.+.+.|.+|++..+.- .+..+|. .+|++.++|.|.+++.-..
T Consensus 229 ~l~v~v~gp~~~~~~~-~d~~dGt~~v~y~p~~~G~y~i~V~~~~ 272 (288)
T 2j3s_A 229 GLAIAVEGPSKAEISF-EDRKDGSCGVAYVVQEPGDYEVSVKFNE 272 (288)
T ss_dssp EEEEEEEESSCEEEEE-EECTTSEEEEEEEESSCEEEEEEEEETT
T ss_pred ceEEEEeCCCCcceeE-EECCCCEEEEEEEcCCCeeEEEEEEECC
Confidence 7888888987644322 2334554 4788889999999996543
No 55
>1n7s_D SNAP-25A; neuronal snare protein complex, four helix bundle, transport protein; 1.45A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 3rk2_D 3rk3_D 3rl0_D 1kil_D 3hd7_D* 3hd9_D 3ipd_D 1urq_D 1xtg_B
Probab=57.98 E-value=30 Score=21.21 Aligned_cols=47 Identities=11% Similarity=0.172 Sum_probs=38.5
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 027560 145 KDKIEGVELHLKRLEAQVQSIHENLLFLKHREAEMREVSEVTNSRVA 191 (222)
Q Consensus 145 ~e~l~~l~~~l~~l~~~l~~I~~eq~~~~~re~~~~~~~est~~rv~ 191 (222)
.+.++.+...+.++......|-.|...+...-++....++++..++-
T Consensus 9 D~~Ld~L~~~v~~lk~la~~ig~El~~Qn~~Ld~l~~~~d~~~~~l~ 55 (66)
T 1n7s_D 9 DENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRID 55 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 35678899999999999999999988888887777777777777654
No 56
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=56.61 E-value=69 Score=25.60 Aligned_cols=42 Identities=19% Similarity=0.455 Sum_probs=29.5
Q ss_pred eeEEEEECCCCCeEEeeecccee--eEEEEeeccceeeeeeeeCC
Q 027560 74 TVSAKVTSPYGNNLHHNENVTHG--QFAFTTTEAGNYMACFWLGS 116 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~~~~~~~--~f~f~~~~~G~y~iCf~n~~ 116 (222)
.+.+.|.+|++-.+.-. +..+| ..+|+++.+|.|.+-+.-..
T Consensus 38 ~l~v~i~~p~~~~~~~~-d~~dGty~v~y~p~~~G~y~i~V~~~g 81 (288)
T 2j3s_A 38 GLSLSIEGPSKVDINTE-DLEDGTCRVTYCPTEPGNYIINIKFAD 81 (288)
T ss_dssp CEEEEEESSSCCEEEEE-ECTTSEEEEEEECSSCEEEEEEEEETT
T ss_pred cEEEEEECCCCceeEEE-ECCCCEEEEEEECCCCeEEEEEEEECC
Confidence 78888889987544322 23355 45788889999999886543
No 57
>1sfc_D Protein (SNAP-25B), protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1
Probab=56.30 E-value=38 Score=22.10 Aligned_cols=47 Identities=11% Similarity=0.172 Sum_probs=38.6
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 027560 145 KDKIEGVELHLKRLEAQVQSIHENLLFLKHREAEMREVSEVTNSRVA 191 (222)
Q Consensus 145 ~e~l~~l~~~l~~l~~~l~~I~~eq~~~~~re~~~~~~~est~~rv~ 191 (222)
.+.++.+...+.+|......|-.|.+.+...-++....++++..++-
T Consensus 28 D~~Ld~Ls~~v~rLk~la~~ig~Eld~Qn~~Ld~i~~~~D~~~~rl~ 74 (87)
T 1sfc_D 28 DENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRID 74 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 35688899999999999999999988888888887777777777764
No 58
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=53.76 E-value=19 Score=25.27 Aligned_cols=40 Identities=13% Similarity=0.076 Sum_probs=31.9
Q ss_pred CeeEEEEECCCCCeEEeeeccceeeEEEEeeccceeeeeeee
Q 027560 73 PTVSAKVTSPYGNNLHHNENVTHGQFAFTTTEAGNYMACFWL 114 (222)
Q Consensus 73 ~~i~v~v~~p~g~~v~~~~~~~~~~f~f~~~~~G~y~iCf~n 114 (222)
.+..|.+++.+|+.+..+. ++|.+.+.--..|.|.+-=.-
T Consensus 43 ~GA~F~l~~~~g~~v~~~~--sdG~~~~~~L~~G~Y~l~Etk 82 (121)
T 2x5p_A 43 AGATMELRDSSGKTISTWI--SDGQVKDFYLMPGKYTFVETA 82 (121)
T ss_dssp CCCEEEEECTTSCEEEEEE--CCSSCEEEEECSEEEEEEEEE
T ss_pred CCCEEEEEECCCCEEEEEE--eCCEEEEcccCCcEEEEEEEe
Confidence 5889999999999876553 468888888889999886543
No 59
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=52.55 E-value=31 Score=19.85 Aligned_cols=32 Identities=13% Similarity=0.187 Sum_probs=19.5
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 027560 146 DKIEGVELHLKRLEAQVQSIHENLLFLKHREA 177 (222)
Q Consensus 146 e~l~~l~~~l~~l~~~l~~I~~eq~~~~~re~ 177 (222)
|.++.++..++.|+..+..+..|..-.+.+-.
T Consensus 5 ekv~~Le~~ld~LqTr~ArLlae~~ssq~KlK 36 (46)
T 3swy_A 5 EKVEQLGSSLDTLQTRFARLLAEYNATQMKMK 36 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777777777777776666544444433
No 60
>3hd7_B Syntaxin-1A; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_B 3ipd_B
Probab=51.39 E-value=55 Score=22.31 Aligned_cols=20 Identities=15% Similarity=0.255 Sum_probs=13.0
Q ss_pred cccchHHHHHHHHHHHHHHH
Q 027560 146 DKIEGVELHLKRLEAQVQSI 165 (222)
Q Consensus 146 e~l~~l~~~l~~l~~~l~~I 165 (222)
+++..++..+..|++.+.++
T Consensus 21 ~eI~~Ie~~I~eL~~iF~dl 40 (109)
T 3hd7_B 21 SEIIKLENSIRELHDMFMDM 40 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45667777777766666555
No 61
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=49.06 E-value=37 Score=27.48 Aligned_cols=43 Identities=16% Similarity=0.291 Sum_probs=30.0
Q ss_pred eeEEEEECCCCCeEEee-ecccee--eEEEEeeccceeeeeeeeCC
Q 027560 74 TVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFWLGS 116 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~-~~~~~~--~f~f~~~~~G~y~iCf~n~~ 116 (222)
.+.+.|.+|+|..+.-. .+..+| ..+|++.+.|.|++.+.-..
T Consensus 144 ~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~y~i~V~~~g 189 (311)
T 1wlh_A 144 PFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRG 189 (311)
T ss_dssp CEEEEEECTTSCBCCCEEEEETTTEEEEEECCCSSEEEEEEEEETT
T ss_pred cEEEEEECCCCCeeeEEEEECCCCEEEEEEECCCCEEEEEEEEECC
Confidence 78999999998643211 222345 45778889999999997654
No 62
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=47.86 E-value=52 Score=20.98 Aligned_cols=39 Identities=13% Similarity=0.168 Sum_probs=23.8
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 027560 146 DKIEGVELHLKRLEAQVQSIHENLLFLKHREAEMREVSE 184 (222)
Q Consensus 146 e~l~~l~~~l~~l~~~l~~I~~eq~~~~~re~~~~~~~e 184 (222)
+.++.++..|+.|+.++..+..+..-.+.+-.+....+|
T Consensus 7 EKv~~LE~sld~LQTrfARLLaEy~ssQ~KLKqRit~LE 45 (74)
T 3swf_A 7 EKVTRMESSVDLLQTRFARILAEYESMQQKLKQRLTKVE 45 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777888887777777765554444443333333
No 63
>3b5n_D Protein transport protein SEC9; snare complex, syntaxin, synaptobrevin, SNAP-25, SSO1P, SNC1P, SEC9P, SSO1, SNC1, coiled coil; 1.60A {Saccharomyces cerevisiae}
Probab=47.79 E-value=46 Score=20.42 Aligned_cols=46 Identities=11% Similarity=0.154 Sum_probs=38.7
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 027560 146 DKIEGVELHLKRLEAQVQSIHENLLFLKHREAEMREVSEVTNSRVA 191 (222)
Q Consensus 146 e~l~~l~~~l~~l~~~l~~I~~eq~~~~~re~~~~~~~est~~rv~ 191 (222)
+.++.+...+.+|......+-+|...+..+-++.-..++.+..|+.
T Consensus 10 ~nLd~l~~~~~rlk~ma~~mg~Eid~QN~~ldrI~~k~d~~d~ri~ 55 (64)
T 3b5n_D 10 RNLDQIQQVSNRLKKMALTTGKELDSQQKRLNNIEESTDDLDINLH 55 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578888889999999999999999888888888888888877764
No 64
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=45.92 E-value=42 Score=34.07 Aligned_cols=60 Identities=17% Similarity=0.306 Sum_probs=35.6
Q ss_pred CcEEEEEEEEeeCCC-CCCCCeeEEEEECCCCCeEEeeecc---ceeeE--EEEee---ccceeeeeeee
Q 027560 54 NVVVLADYYVIDEAH-PEHPPTVSAKVTSPYGNNLHHNENV---THGQF--AFTTT---EAGNYMACFWL 114 (222)
Q Consensus 54 ~~~i~~~y~v~~~~~-~~~~~~i~v~v~~p~g~~v~~~~~~---~~~~f--~f~~~---~~G~y~iCf~n 114 (222)
|+++++..-+.+.+. +.+ ..+.+.|.||+|+.+.+..-. ..|.| +|..+ ..|.|++=+..
T Consensus 141 GqtV~~r~i~~d~~~~p~~-~~v~v~l~dP~g~~i~~~~~~~t~~~G~~~~~f~Lp~~~~~G~w~I~v~~ 209 (1661)
T 2b39_A 141 GSTVLYRVFTVDHKLLPVG-QTVFITIETPDGIPVKRDSKSSQNQFGILTLSWNIPELVNMGVWKIKAYY 209 (1661)
T ss_dssp TSEEEEEEEEECTTSCCCC-CCEEEEEEETTEEEEEEEEECTTTTTSCCEEEEECCSSCCCEEEEEEEEE
T ss_pred CCEEEEEEEEECCCCcccC-ceEEEEEECCCCCEEeeeeecccccCCeEeeeeeCCCCccccceEEEEEe
Confidence 445554444443321 222 378999999999988764322 23433 44443 45999988864
No 65
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=42.98 E-value=1.3e+02 Score=30.13 Aligned_cols=61 Identities=18% Similarity=0.228 Sum_probs=35.5
Q ss_pred CcEEEEEEEEeeCCC-CCCCCee-EEEEECCCCCeEEeeecc--ceeeE--EEEe---eccceeeeeeeeC
Q 027560 54 NVVVLADYYVIDEAH-PEHPPTV-SAKVTSPYGNNLHHNENV--THGQF--AFTT---TEAGNYMACFWLG 115 (222)
Q Consensus 54 ~~~i~~~y~v~~~~~-~~~~~~i-~v~v~~p~g~~v~~~~~~--~~~~f--~f~~---~~~G~y~iCf~n~ 115 (222)
|+.+..+--+.+.+. +.. ..+ .+.|.||+|+.+.++... ..|.+ +|.. +..|.|+|-....
T Consensus 118 gq~V~~rv~~~~~~~~p~~-~~~~~v~i~dp~g~~i~~~~~~~~~~G~~~~~f~L~~~~~~G~w~I~~~~~ 187 (1451)
T 4acq_A 118 GQTVKFRVVSMDENFHPLN-ELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKK 187 (1451)
T ss_dssp TCEEEEEEEEECTTCCBCC-CEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECT
T ss_pred CCEEEEEEEEECCCCcCcc-CceeEEEEECCCCCEEEEeeeccCCCCeEEEEeECCCCCCceeEEEEEEec
Confidence 565554444444321 222 244 689999999999876432 23433 3333 3469999988654
No 66
>1qle_D Cytochrome AA3, ccytochrome C oxidase; oxidoreductase/immune system, complex (oxidoreductase/antibody), electron transport; HET: HEA PC1; 3.0A {Paracoccus denitrificans} SCOP: f.23.8.1
Probab=42.66 E-value=45 Score=18.84 Aligned_cols=29 Identities=21% Similarity=0.268 Sum_probs=17.7
Q ss_pred HHHHHHHHhHHHHHHHhHHHHHHHHHHHH
Q 027560 179 MREVSEVTNSRVAWLSILSLGVCIAVSSL 207 (222)
Q Consensus 179 ~~~~~est~~rv~~~sil~i~vli~~~~~ 207 (222)
|.++-+.--+-..|.+++-++++++++++
T Consensus 13 hE~Ty~gFi~~~k~gt~~~~~~ll~maif 41 (43)
T 1qle_D 13 QQATFAGFIKGATWVSILSIAVLVFLALA 41 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444455667777777777777653
No 67
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=42.53 E-value=66 Score=32.70 Aligned_cols=61 Identities=15% Similarity=0.238 Sum_probs=38.1
Q ss_pred CcEEEEEEEEeeCCC-CCCCCeeEEEEECCCCCeEEeeecc-ceeeEE---EEee---ccceeeeeeeeC
Q 027560 54 NVVVLADYYVIDEAH-PEHPPTVSAKVTSPYGNNLHHNENV-THGQFA---FTTT---EAGNYMACFWLG 115 (222)
Q Consensus 54 ~~~i~~~y~v~~~~~-~~~~~~i~v~v~~p~g~~v~~~~~~-~~~~f~---f~~~---~~G~y~iCf~n~ 115 (222)
|++|++..-+.+.+. +.. ..+.+.|.||+|+.+.++.-. ..|.|+ |..+ ..|.|++=+...
T Consensus 138 GqtV~~r~i~~d~~~~p~~-~~v~v~l~dP~G~~i~~~~~~~~~G~~~~~~f~Lp~~~~~G~w~I~v~~~ 206 (1676)
T 3cu7_A 138 DQSVKVRVYSLNDDLKPAK-RETVLTFIDPEGSEVDMVEEIDHIGIISFPDFKIPSNPRYGMWTIKAKYK 206 (1676)
T ss_dssp TCEECEEEEEECTTCSCCC-CCEEEEEEETTTEECCCEEECCSSSEEECCCEECCSSCCCEEEEEEEEBS
T ss_pred CCEEEEEEEEECCCCcccc-cceEEEEECCCCCEEEEEeeecCCCceecceeeCCCCccccceEEEEEec
Confidence 555555544444322 222 389999999999998776422 345554 3332 469999998754
No 68
>1l4a_D S-SNAP25 fusion protein; snare, snare complex, membrane fusion, neurotransmission, endocytosis/exocytosis complex; 2.95A {Loligo pealei} SCOP: h.1.15.1
Probab=41.90 E-value=48 Score=21.69 Aligned_cols=46 Identities=11% Similarity=0.195 Sum_probs=37.2
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 027560 146 DKIEGVELHLKRLEAQVQSIHENLLFLKHREAEMREVSEVTNSRVA 191 (222)
Q Consensus 146 e~l~~l~~~l~~l~~~l~~I~~eq~~~~~re~~~~~~~est~~rv~ 191 (222)
+.++.+...+.+|......|-.|.+.+...-++.-..++++..++-
T Consensus 30 ~~Ld~ls~~l~rLk~mA~~mg~Eld~Qn~~LD~i~~~~D~~~~rl~ 75 (87)
T 1l4a_D 30 NNMKEVSSMIGNLRNMAIDMGNEIGSQNRQVDRIQQKAESNESRID 75 (87)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHT
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678888888899999999999988888887777777777777653
No 69
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=41.17 E-value=72 Score=20.73 Aligned_cols=40 Identities=18% Similarity=0.138 Sum_probs=21.6
Q ss_pred eeEEEEECCCCC-eEEeeeccceeeEEEEe---------eccceeeeeee
Q 027560 74 TVSAKVTSPYGN-NLHHNENVTHGQFAFTT---------TEAGNYMACFW 113 (222)
Q Consensus 74 ~i~v~v~~p~g~-~v~~~~~~~~~~f~f~~---------~~~G~y~iCf~ 113 (222)
.|.|.+++-..- .+....-..+|.++|++ +..|.|-+---
T Consensus 19 ~Vefe~yNyae~~~~~~~~TD~~G~~s~~~G~Gd~~v~A~k~G~~g~a~l 68 (82)
T 3e8v_A 19 TVEFKVYNYAEFYTVATKHTDRSGHASLTAGKGDMLVWASKDGRFGYSKL 68 (82)
T ss_dssp EEEEEEEETTEEEEEEEEECCTTSEEEEECCSEEEEEEEEETTEEEEEEE
T ss_pred EEEEEEEEchheeEEEEEEECCCceEEEEEcCCceEEEeccCCEEEEEEe
Confidence 677777764110 11111222368888887 77777665543
No 70
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=40.27 E-value=38 Score=17.33 Aligned_cols=19 Identities=32% Similarity=0.461 Sum_probs=10.5
Q ss_pred chHHHHHHHHHHHHHHHHH
Q 027560 149 EGVELHLKRLEAQVQSIHE 167 (222)
Q Consensus 149 ~~l~~~l~~l~~~l~~I~~ 167 (222)
..+++.+.+|+..++.+++
T Consensus 2 srlee~~r~l~~ivq~lq~ 20 (32)
T 2akf_A 2 SRLEEDVRNLNAIVQKLQE 20 (32)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHH
Confidence 3456666666665555443
No 71
>1m56_D Cytochrome C oxidase; membrane protein, oxidoreductase; HET: HEA PEH; 2.30A {Rhodobacter sphaeroides} SCOP: f.23.8.1 PDB: 1m57_D*
Probab=39.46 E-value=58 Score=19.13 Aligned_cols=27 Identities=11% Similarity=0.153 Sum_probs=16.7
Q ss_pred HHHHHHhHHHHHHHhHHHHHHHHHHHH
Q 027560 181 EVSEVTNSRVAWLSILSLGVCIAVSSL 207 (222)
Q Consensus 181 ~~~est~~rv~~~sil~i~vli~~~~~ 207 (222)
++-+.--+-..|.+++-++++++++++
T Consensus 23 ~Ty~gFi~~~k~gt~~~~~~ll~laif 49 (51)
T 1m56_D 23 KTFAGFVRMVTWAAVVIVAALIFLALA 49 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444455667777777777777654
No 72
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=38.96 E-value=83 Score=32.06 Aligned_cols=42 Identities=14% Similarity=0.117 Sum_probs=28.2
Q ss_pred eeEEEEECCCCCeEEeeeccceeeEEEEee---ccceeeeeeeeC
Q 027560 74 TVSAKVTSPYGNNLHHNENVTHGQFAFTTT---EAGNYMACFWLG 115 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~~~~~~~~f~f~~~---~~G~y~iCf~n~ 115 (222)
.+.+.|.||+|+.+.++.-...-..+|..+ ..|.|+|.....
T Consensus 160 ~~~v~i~dP~g~~i~~~~~~~~~~~~f~L~~~~~~G~w~I~v~~~ 204 (1642)
T 3prx_B 160 TVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYE 204 (1642)
T ss_dssp CEEEEEECSSCCEEEEEEECTTCCCEEECCSSCCCEEEEEEEEET
T ss_pred eEEEEEECCCCCEEEEEEecccceEEEEcCCCCCceeEEEEEEeC
Confidence 789999999999998764222222344332 458888888643
No 73
>3gf8_A Putative polysaccharide binding proteins (DUF1812; NP_809975.1, joint center for structural genomics; HET: MSE; 2.20A {Bacteroides thetaiotaomicron vpi-5482}
Probab=38.64 E-value=41 Score=27.32 Aligned_cols=67 Identities=18% Similarity=0.273 Sum_probs=33.3
Q ss_pred eeEEcCC-CcEEEEEEEEeeCCCCCC----CCeeEEEEECCCCCeEEeeecc--c--eeeEEEEe-eccceeeeeeee
Q 027560 47 VSEEINS-NVVVLADYYVIDEAHPEH----PPTVSAKVTSPYGNNLHHNENV--T--HGQFAFTT-TEAGNYMACFWL 114 (222)
Q Consensus 47 f~e~v~~-~~~i~~~y~v~~~~~~~~----~~~i~v~v~~p~g~~v~~~~~~--~--~~~f~f~~-~~~G~y~iCf~n 114 (222)
++|+.+. ...+...|.-.-. ..+. -..+++.|+|.+|+.+.+.... . .+.|.... -.+|.|++=.+.
T Consensus 7 I~edl~dC~~~l~F~Ydyn~~-~~d~f~~~V~~V~lyvFD~~G~~v~~~~~~~~~L~~~~y~m~l~Lp~G~Y~~VaWg 83 (296)
T 3gf8_A 7 FNEDLPECRLSVKFKYDYNME-FADAFHAQVDKVELYVFDKNGKYLFKQAEEGSALSTGNYLMEVELPVGQYQFMAWA 83 (296)
T ss_dssp ------CCCEEEEEECCCSTT-CSCCHHHHCCEEEEEEECTTSBEEEEEEEESGGGGSSCCCEEECCCSEEEEEEEEE
T ss_pred CCcCccCCCCEEEEEEecCCC-cccccccccCEEEEEEEcCCCCEEEEEecchhhcccCceEEEEecCCCcEEEEEEE
Confidence 6666655 3455555433211 1111 1399999999999998775322 1 33333333 236888854443
No 74
>3ogl_Q JAZ1 incomplete degron peptide; leucine-rich repeats, ubiquitin ligase, SCF, protein binding; HET: 7JA; 3.18A {Arabidopsis thaliana} PDB: 3ogm_Q*
Probab=38.63 E-value=11 Score=17.91 Aligned_cols=11 Identities=36% Similarity=0.631 Sum_probs=7.9
Q ss_pred HHHHHHhhhcc
Q 027560 210 WYLTRYFQKKK 220 (222)
Q Consensus 210 ~~lk~fF~~Kk 220 (222)
..|.+||+++|
T Consensus 8 ~SLqRFleKRk 18 (21)
T 3ogl_Q 8 ASLHRFLEKRK 18 (26)
T ss_pred HHHHHHHHHhh
Confidence 35778888775
No 75
>2q0z_X Protein Pro2281; SEC63, SEC, NESG, HR1979, structural genomics, translocase, northeast structural genomics consortium, PSI-2; 2.00A {Homo sapiens} SCOP: a.289.1.1 b.1.18.22
Probab=38.09 E-value=1.3e+02 Score=24.57 Aligned_cols=97 Identities=11% Similarity=0.092 Sum_probs=54.3
Q ss_pred eeeeEEEEEcCCCcceeeEEcCCCcEEEEEEEEeeCCC----------C-CCCCeeEEEEECCCCCeEEeeec-----cc
Q 027560 31 VTEAIWLQIPSSGTKCVSEEINSNVVVLADYYVIDEAH----------P-EHPPTVSAKVTSPYGNNLHHNEN-----VT 94 (222)
Q Consensus 31 ~~~~l~f~i~~~~~~Cf~e~v~~~~~i~~~y~v~~~~~----------~-~~~~~i~v~v~~p~g~~v~~~~~-----~~ 94 (222)
|.-.+.+++.+. +.+..++.+.+...+...+. + +....--+.|.|++++.++.-+. ..
T Consensus 218 P~l~v~~~v~~~------~~i~~~~~~~l~v~l~~~~~~~~~v~aP~fp~~k~e~wwi~v~d~~~~~ll~~~r~~l~~~~ 291 (339)
T 2q0z_X 218 PNIELSYEVVDK------DSIRSGGPVVVLVQLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKA 291 (339)
T ss_dssp CCEEEEEEETTG------GGCBTTSEEEEEEEEEECSSCCSSCCCTTCSSCCCCCEEEEEEETTTTEEEEEEEECCSSEE
T ss_pred CcEEEEEEEccC------ccccCCCcEEEEEEEEECCCCCCceeCCCCCCCCCCcEEEEEEECCCCEEEEEEEEecccce
Confidence 455667776642 23555776666666553210 0 11125677888988766544322 12
Q ss_pred eeeEEEEeeccceeeeeeeeCCCCCCcccEEEEEEEEec
Q 027560 95 HGQFAFTTTEAGNYMACFWLGSNPQKVADATLGLDWRIG 133 (222)
Q Consensus 95 ~~~f~f~~~~~G~y~iCf~n~~~~~~~~~~~v~f~i~~g 133 (222)
.-+..|+++.+|.|.+.+.--+..+-+....+.+.+.+.
T Consensus 292 ~~~l~f~~P~~g~~~~~v~~vSD~ylG~D~~~~i~~~v~ 330 (339)
T 2q0z_X 292 KVKLDFVAPATGAHNYTLYFMSDAYMGCDQEYKFSVDVK 330 (339)
T ss_dssp EEEEEEECCSSEEEEEEEEEEESSCSSCCEEEEEEEEEB
T ss_pred EEEEEEECCCCCCeeEEEEEEcccccCcceEEEEEEEEe
Confidence 346788898889877766554333333455555555553
No 76
>3pay_A Putative adhesin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, cell adhesion; 2.50A {Bacteroides ovatus}
Probab=34.66 E-value=32 Score=28.29 Aligned_cols=41 Identities=17% Similarity=0.108 Sum_probs=25.6
Q ss_pred CeeEEEEECCCCCeEEeeeccc---eeeEEEEee---ccceeeeeee
Q 027560 73 PTVSAKVTSPYGNNLHHNENVT---HGQFAFTTT---EAGNYMACFW 113 (222)
Q Consensus 73 ~~i~v~v~~p~g~~v~~~~~~~---~~~f~f~~~---~~G~y~iCf~ 113 (222)
..+++.|+|.+|+.+.+..... .+.+....+ .+|.|++=.+
T Consensus 36 ~~v~lyvFD~~G~~v~~~~~~~~~L~~~~~m~l~~~l~~G~Y~~VaW 82 (314)
T 3pay_A 36 KSVDVLVFDSDDKLLFTKSVKVAALVGGNRMSLTDELDFGSYKVLTV 82 (314)
T ss_dssp CEEEEEEECTTSBEEEEEEEEGGGSBTTTEEECTTTCCSEEEEEEEE
T ss_pred CEEEEEEEcCCCCEEEEEecchhhccCCceEecCCcCCCCcEEEEEE
Confidence 3999999999999987653221 111244433 3677775443
No 77
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=31.81 E-value=73 Score=19.97 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=22.0
Q ss_pred hccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 027560 144 KKDKIEGVELHLKRLEAQVQSIHENLLFLKHRE 176 (222)
Q Consensus 144 ~~e~l~~l~~~l~~l~~~l~~I~~eq~~~~~re 176 (222)
+..++..++..+..+......+..+-..++..-
T Consensus 27 K~~~i~~LE~~v~~le~~~~~l~~en~~Lr~~i 59 (70)
T 1gd2_E 27 KEDHLKALETQVVTLKELHSSTTLENDQLRQKV 59 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456778888888888777766666555554433
No 78
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=31.12 E-value=3.9e+02 Score=26.26 Aligned_cols=62 Identities=16% Similarity=0.173 Sum_probs=38.5
Q ss_pred CcEEEEEEEEeeCCC-CCCC-CeeEEEEECCCCCeEEeeecc--ceeeE--EEEee---ccceeeeeeeeC
Q 027560 54 NVVVLADYYVIDEAH-PEHP-PTVSAKVTSPYGNNLHHNENV--THGQF--AFTTT---EAGNYMACFWLG 115 (222)
Q Consensus 54 ~~~i~~~y~v~~~~~-~~~~-~~i~v~v~~p~g~~v~~~~~~--~~~~f--~f~~~---~~G~y~iCf~n~ 115 (222)
|+++.+.--+.+.+. +... ..+.+.|.||+|+.+.++... ..|.+ +|..+ ..|.|++=....
T Consensus 114 GqtV~~r~~~~~~~~~p~~~~~~v~v~l~dp~g~~i~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~I~~~~~ 184 (1325)
T 2pn5_A 114 GDTVNFRVIVLDTELKPPARVKSVYVTIRDPQRNVIRKWSTAKLYAGVFESDLQIAPTPMLGVWNISVEVE 184 (1325)
T ss_dssp TCEEEEEEEEEETTSSCCSSCCEEEEEEECTTCCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEEET
T ss_pred CCEEEEEEEEecCCccccccCccEEEEEECCCCCEEEEEecccCCCCeEecceECCCCccccceEEEEEeC
Confidence 666665555554432 1111 268999999999998877543 24444 33333 469999988754
No 79
>2xwx_A GBPA, glcnac-binding protein A; chitin-binding protein; 1.80A {Vibrio cholerae}
Probab=27.50 E-value=2.8e+02 Score=23.45 Aligned_cols=44 Identities=18% Similarity=0.162 Sum_probs=29.4
Q ss_pred eeEEEEECCCCCeEEeee-ccceee-EEEEee----ccceeeeeeeeCCC
Q 027560 74 TVSAKVTSPYGNNLHHNE-NVTHGQ-FAFTTT----EAGNYMACFWLGSN 117 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~~-~~~~~~-f~f~~~----~~G~y~iCf~n~~~ 117 (222)
.+..+|+|..|+.+-... ....+. .+++.. +.|.|.+-+.....
T Consensus 326 ~v~~~v~d~~~~~~~~~~~~v~~~~~~~~tl~ls~~~aGhh~lvv~~~~~ 375 (391)
T 2xwx_A 326 SAELTVYNHHQKPLASWSQAMTDGELKSITLELSEAKAGHHMLVSRIKDR 375 (391)
T ss_dssp EEEEEEECTTSCEEEEEEEEECTTCEEEEEEECSCCCSEEEEEEEEEEET
T ss_pred EEEEEEEcCCCCccceeeEEEcCCCcceEEEEccCCCCccEEEEEEEECC
Confidence 888999999998875543 222332 444443 67999988876543
No 80
>3ogk_Q JAZ1 incomplete degron peptide; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana}
Probab=26.88 E-value=19 Score=17.34 Aligned_cols=10 Identities=40% Similarity=0.813 Sum_probs=7.5
Q ss_pred HHHHHhhhcc
Q 027560 211 YLTRYFQKKK 220 (222)
Q Consensus 211 ~lk~fF~~Kk 220 (222)
.|.+|++++|
T Consensus 4 SLqRFleKRk 13 (22)
T 3ogk_Q 4 SLHRFLEKRK 13 (26)
T ss_pred hHHHHHHHHH
Confidence 5788888775
No 81
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=26.64 E-value=2.9e+02 Score=23.25 Aligned_cols=42 Identities=14% Similarity=0.177 Sum_probs=27.5
Q ss_pred eeEEEEECCCCCeEEeeec----------c-ceeeEEEEeeccceeeeeeeeC
Q 027560 74 TVSAKVTSPYGNNLHHNEN----------V-THGQFAFTTTEAGNYMACFWLG 115 (222)
Q Consensus 74 ~i~v~v~~p~g~~v~~~~~----------~-~~~~f~f~~~~~G~y~iCf~n~ 115 (222)
++++.|++|+|..++-... . .-.+..+..+..|.|++-+...
T Consensus 367 dldl~v~~~~g~~~~~n~~~~~~~~~~d~~~n~E~v~~~~~~~G~y~i~V~~~ 419 (434)
T 1wmd_A 367 DLDLVITAPNGTQYVGNDFTSPYNDNWDGRNNVENVFINAPQSGTYTIEVQAY 419 (434)
T ss_dssp EEEEEEECTTSCEEETTCCSSSTTSCCCSSCSEEEEEESSCCSEEEEEEEEEE
T ss_pred ccCEEEEeCCCCEEeCCCccccccCCCCCCCceeEEEEcCCCCeEEEEEEEEE
Confidence 8999999999987652111 0 1134555556778888887543
No 82
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=25.03 E-value=1.2e+02 Score=19.72 Aligned_cols=17 Identities=24% Similarity=0.554 Sum_probs=13.7
Q ss_pred eeeEEEEeeccceee-ee
Q 027560 95 HGQFAFTTTEAGNYM-AC 111 (222)
Q Consensus 95 ~~~f~f~~~~~G~y~-iC 111 (222)
...+.|++.++|.|. .|
T Consensus 68 ~~~~~~t~~~~G~Y~y~C 85 (100)
T 4hci_A 68 EKNITVKPKSAGTYELIC 85 (100)
T ss_dssp EEEEEECCCSCEEEEEEC
T ss_pred ceeEEEecccCceEEEEC
Confidence 457888888999998 56
No 83
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=25.03 E-value=1.5e+02 Score=22.93 Aligned_cols=60 Identities=10% Similarity=0.061 Sum_probs=36.0
Q ss_pred CCcEEEEEEEEeeCCC-C---CCCCeeEEEEECCCCCeEEe---------------eeccceeeEEEEeeccceeeeee
Q 027560 53 SNVVVLADYYVIDEAH-P---EHPPTVSAKVTSPYGNNLHH---------------NENVTHGQFAFTTTEAGNYMACF 112 (222)
Q Consensus 53 ~~~~i~~~y~v~~~~~-~---~~~~~i~v~v~~p~g~~v~~---------------~~~~~~~~f~f~~~~~G~y~iCf 112 (222)
++....+...+..-+. + ....+..|.+++.+|+.+.. ..-...|.+.|.--..|.|.+==
T Consensus 120 ~n~~~~g~~~i~K~d~~~~~~~~L~GA~F~l~~~~g~~~~~~~~g~~~~~~~~~~~~~Td~~G~~~~~~L~~G~Y~l~E 198 (239)
T 2pz4_A 120 KIIWSTGELDLLKVGVDGDTKKPLAGVVFELYEKNGRTPIRVKNGVHSQDIDAAKHLETDSSGHIRISGLIHGDYVLKE 198 (239)
T ss_dssp CBCCCEEEEEEEEEEEETTEEEECCSCEEEEEETTCSSCBCEETTEECCSTTCBSCEECCTTSEEEEEEEESEEEEEEE
T ss_pred eeeeeeccEEEEEeccCCCCCcccCCCEEEEEeCCCCEEEeecccceecccccceEEEECCCCeEEECCCCCceEEEEE
Confidence 3455566666653211 1 11247889999988876531 11123688888877889887543
No 84
>2yko_A LINE-1 ORF1P; RNA-binding protein, genome evolution, nucleic acid chaperon coiled-coil; HET: MSE; 2.10A {Homo sapiens} PDB: 2ykp_A 2ykq_A 2ldy_A
Probab=24.89 E-value=2.1e+02 Score=22.35 Aligned_cols=26 Identities=15% Similarity=0.256 Sum_probs=18.0
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHH
Q 027560 147 KIEGVELHLKRLEAQVQSIHENLLFL 172 (222)
Q Consensus 147 ~l~~l~~~l~~l~~~l~~I~~eq~~~ 172 (222)
.++++++.++.|.+.+.+|.+..+-.
T Consensus 7 Rvd~~EErIs~le~rleei~q~eq~~ 32 (233)
T 2yko_A 7 RCDQLEERVSAAEDEINEIKREGKFR 32 (233)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888888888887777654333
No 85
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=24.78 E-value=1.5e+02 Score=19.35 Aligned_cols=28 Identities=7% Similarity=0.204 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 027560 165 IHENLLFLKHREAEMREVSEVTNSRVAW 192 (222)
Q Consensus 165 I~~eq~~~~~re~~~~~~~est~~rv~~ 192 (222)
+.+.-+-+......++..+...+++.+|
T Consensus 38 L~~kt~~L~~~s~~F~~~A~~l~rkmww 65 (91)
T 3hd7_A 38 LDDRADALQAGASQFETSAAKLKRKYWW 65 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334444444455555555544443
No 86
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=24.73 E-value=87 Score=16.59 Aligned_cols=20 Identities=10% Similarity=0.223 Sum_probs=8.8
Q ss_pred chHHHHHHHHHHHHHHHHHH
Q 027560 149 EGVELHLKRLEAQVQSIHEN 168 (222)
Q Consensus 149 ~~l~~~l~~l~~~l~~I~~e 168 (222)
++++..+..|...-+++.+|
T Consensus 4 nQLEdKVEeLl~~~~~Le~E 23 (34)
T 3c3f_A 4 XQIEXKLEXILSXLYHXENE 23 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhHHHHH
Confidence 34444444444444444443
No 87
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=24.61 E-value=90 Score=16.76 Aligned_cols=21 Identities=5% Similarity=0.313 Sum_probs=9.4
Q ss_pred chHHHHHHHHHHHHHHHHHHH
Q 027560 149 EGVELHLKRLEAQVQSIHENL 169 (222)
Q Consensus 149 ~~l~~~l~~l~~~l~~I~~eq 169 (222)
++++..+..|...-.++.++.
T Consensus 4 nQLE~KVEeLl~~~~~Le~eV 24 (36)
T 1kd8_B 4 KQLKAKVEELKSKLWHLKNKV 24 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHHHHH
Confidence 344444444444444444443
No 88
>1nqj_A Class 1 collagenase; beta sandwich, metalloprotease, collagen-binding domain, lithium, chlorine, hydrolase; 1.00A {Clostridium histolyticum} SCOP: b.23.2.1 PDB: 2o8o_A 1nqd_A
Probab=24.36 E-value=1.8e+02 Score=20.11 Aligned_cols=64 Identities=13% Similarity=0.111 Sum_probs=42.1
Q ss_pred CCcceeeEEcCCCcEEEEEEEEeeCCCCCCCCeeEEEEECCCC--CeEEee--ecc-ceeeEEEEeeccceeeeeeee
Q 027560 42 SGTKCVSEEINSNVVVLADYYVIDEAHPEHPPTVSAKVTSPYG--NNLHHN--ENV-THGQFAFTTTEAGNYMACFWL 114 (222)
Q Consensus 42 ~~~~Cf~e~v~~~~~i~~~y~v~~~~~~~~~~~i~v~v~~p~g--~~v~~~--~~~-~~~~f~f~~~~~G~y~iCf~n 114 (222)
.....|..++++...|.+++.-... . ++...+++.++ +.+-.. ++. ..++ |.+. +|.|.+.+..
T Consensus 38 D~~D~y~f~v~~~g~v~I~l~~~~~-----~-~~~w~ly~~~dl~nyv~y~~~~gn~~~~~--~~~~-pGkYYl~Vy~ 106 (119)
T 1nqj_A 38 DSRDYYSFEVKEEGEVNIELDKKDE-----F-GVTWTLHPESNINDRITYGQVDGNKVSNK--VKLR-PGKYYLLVYK 106 (119)
T ss_dssp CCEEEEEEEESSCEEEEEEEEESSS-----S-EEEEEEEECC----CCEECEEETTEEEEE--EEEC-SEEEEEEEEE
T ss_pred CCcEEEEEECCCCCeEEEEEEeCCC-----C-CEEEEEEccCCCccceEEeecCCCcEEEE--EEcC-CcEEEEEEEE
Confidence 4588899999998888887755321 2 88889998877 544322 221 1343 4554 9999999975
No 89
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=23.77 E-value=1e+02 Score=17.30 Aligned_cols=20 Identities=20% Similarity=0.371 Sum_probs=12.7
Q ss_pred chHHHHHHHHHHHHHHHHHH
Q 027560 149 EGVELHLKRLEAQVQSIHEN 168 (222)
Q Consensus 149 ~~l~~~l~~l~~~l~~I~~e 168 (222)
+.+++++..|..++..+...
T Consensus 19 e~LE~Ri~~LE~KLd~L~~~ 38 (43)
T 2pnv_A 19 EDFEKRIVTLETKLETLIGS 38 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45666666666666666554
No 90
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=22.03 E-value=1.6e+02 Score=18.67 Aligned_cols=19 Identities=26% Similarity=0.536 Sum_probs=10.9
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 027560 150 GVELHLKRLEAQVQSIHEN 168 (222)
Q Consensus 150 ~l~~~l~~l~~~l~~I~~e 168 (222)
++++.+++|...++.++..
T Consensus 4 dlEEKv~~LE~sld~LQTr 22 (74)
T 3swf_A 4 GLEEKVTRMESSVDLLQTR 22 (74)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 4566666666665555443
No 91
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=21.27 E-value=68 Score=23.84 Aligned_cols=39 Identities=13% Similarity=-0.098 Sum_probs=23.0
Q ss_pred cCCCcEEEEEEEEeeCCCCCCCCeeEEEEECCCCCeEEee
Q 027560 51 INSNVVVLADYYVIDEAHPEHPPTVSAKVTSPYGNNLHHN 90 (222)
Q Consensus 51 v~~~~~i~~~y~v~~~~~~~~~~~i~v~v~~p~g~~v~~~ 90 (222)
+..|+.+.+.+.+.-...-.. +-+.+.|++..|..++..
T Consensus 66 ~~~Ge~v~l~i~~~~~~~i~~-~v~G~~Ik~~~G~~I~g~ 104 (188)
T 2r5o_A 66 LTGNQQTDFLMKVVFEYDFDC-VVPGILIKTLDGLFLYGT 104 (188)
T ss_dssp EETTCEEEEEEEEEESSCEEE-EEEEEEEEETTCCEEEEE
T ss_pred EeCCCEEEEEEEEEECCcCCc-cEEEEEEECCCCCEEEec
Confidence 334565555554432110011 378899999999988764
No 92
>2djm_A Glucoamylase A; beta sandwich, anti-parallel, strach binding, carbohydrate binding, sugar binding protein; NMR {Rhizopus oryzae} PDB: 2v8l_A* 2v8m_A* 2vq4_A
Probab=20.37 E-value=2.1e+02 Score=19.36 Aligned_cols=70 Identities=13% Similarity=0.050 Sum_probs=39.8
Q ss_pred cCCCcceeeEEcCCCcEEEEEEEEeeCCCCCCCCeeEEEEECCCC-------CeE--Eeee--ccceeeEEEEeecccee
Q 027560 40 PSSGTKCVSEEINSNVVVLADYYVIDEAHPEHPPTVSAKVTSPYG-------NNL--HHNE--NVTHGQFAFTTTEAGNY 108 (222)
Q Consensus 40 ~~~~~~Cf~e~v~~~~~i~~~y~v~~~~~~~~~~~i~v~v~~p~g-------~~v--~~~~--~~~~~~f~f~~~~~G~y 108 (222)
|..+.-|.-.-.-.+..+.|...|..-.. .. .|.++.++..+ ++. +... ...-..|+|..+-+|.-
T Consensus 4 ~~~~~V~LE~~~~~~~~l~GtV~V~Nlaf--eK-~V~VR~T~~~D~W~t~~~dv~a~y~~~~~~~~~D~F~F~i~l~~~~ 80 (106)
T 2djm_A 4 PSSASVQLDSYNYDGSTFSGKIYVKNIAY--SK-KVTVVYADGSDNWNNNGNIIAASFSGPISGSNYEYWTFSASVKGIK 80 (106)
T ss_dssp CSSSSEEEEEEEESSSCEEEEEEECCSSS--CE-EEEEEEEETTSSCSSCCCEEECEEEEECTTSSCEEEEEEECCSSEE
T ss_pred CcCCcEEEEEEEECCCEEEEEEEEeecCc--Cc-EEEEEECCCcCCCccccEEEEEEEecCCCCCCeEEEEEEEECCCCe
Confidence 44455555544445677899998875422 23 67777763311 110 1111 22346888888877777
Q ss_pred eeee
Q 027560 109 MACF 112 (222)
Q Consensus 109 ~iCf 112 (222)
+||+
T Consensus 81 eFcI 84 (106)
T 2djm_A 81 EFYI 84 (106)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7776
Done!