Query 027562
Match_columns 222
No_of_seqs 156 out of 2233
Neff 11.4
Searched_HMMs 29240
Date Mon Mar 25 19:59:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027562.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027562hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1oy3_D Transcription factor in 100.0 1.1E-42 3.8E-47 257.4 15.9 213 2-221 10-255 (282)
2 2xai_A ASB-9, ankyrin repeat a 100.0 4.5E-42 1.6E-46 251.7 15.1 193 2-221 4-196 (261)
3 2dzn_A Probable 26S proteasome 100.0 3.4E-41 1.2E-45 242.2 17.8 197 2-221 3-205 (228)
4 1yyh_A HN1;, notch 1, ankyrin 100.0 1.2E-41 4.1E-46 248.4 15.5 195 2-221 11-220 (253)
5 3aji_A 26S proteasome non-ATPa 100.0 4.2E-41 1.4E-45 242.3 17.6 195 2-221 7-202 (231)
6 2f8y_A Notch homolog 1, transl 100.0 3.1E-41 1.1E-45 241.7 16.9 195 2-220 26-220 (223)
7 3b7b_A Euchromatic histone-lys 100.0 2.2E-41 7.7E-46 244.6 15.5 195 2-221 12-207 (237)
8 1k1a_A B-cell lymphoma 3-encod 100.0 4.3E-41 1.5E-45 243.5 16.5 199 2-221 10-213 (241)
9 4b93_B Ankyrin repeat domain-c 100.0 2.4E-41 8.1E-46 248.5 14.2 194 3-221 13-215 (269)
10 2rfa_A Transient receptor pote 100.0 3E-41 1E-45 243.2 13.4 211 2-220 4-226 (232)
11 3d9h_A CDNA FLJ77766, highly s 100.0 6.1E-41 2.1E-45 248.6 15.3 193 2-221 60-252 (285)
12 3kea_A K1L; tropism, ANK repea 100.0 2.3E-41 7.8E-46 250.9 12.8 192 2-221 32-225 (285)
13 1wdy_A 2-5A-dependent ribonucl 100.0 1.2E-40 4.1E-45 246.6 15.6 212 3-221 41-283 (285)
14 3utm_A Tankyrase-1; tankyrase, 100.0 1.4E-40 4.8E-45 253.1 15.1 213 2-221 59-310 (351)
15 3aji_A 26S proteasome non-ATPa 100.0 6.3E-41 2.1E-45 241.3 12.4 191 2-217 41-231 (231)
16 2pnn_A Transient receptor pote 100.0 3.9E-40 1.3E-44 242.9 14.9 212 2-220 14-263 (273)
17 1yyh_A HN1;, notch 1, ankyrin 100.0 5.3E-40 1.8E-44 239.7 14.5 191 2-216 58-248 (253)
18 4g8k_A 2-5A-dependent ribonucl 100.0 8E-40 2.7E-44 248.1 15.4 98 2-101 26-153 (337)
19 2etb_A Transient receptor pote 100.0 6.4E-40 2.2E-44 239.6 14.1 210 2-219 3-249 (256)
20 3hra_A Ankyrin repeat family p 100.0 1.2E-39 4.2E-44 229.8 14.9 189 2-214 6-201 (201)
21 1ikn_D Protein (I-kappa-B-alph 100.0 5E-41 1.7E-45 242.7 7.3 198 2-218 9-211 (236)
22 3ljn_A Hypothetical protein; a 100.0 8.5E-40 2.9E-44 250.4 13.6 211 2-220 21-273 (364)
23 1k1a_A B-cell lymphoma 3-encod 100.0 2.2E-40 7.4E-45 239.9 9.6 194 2-216 47-241 (241)
24 1s70_B 130 kDa myosin-binding 100.0 9.8E-40 3.3E-44 243.7 13.2 196 2-221 41-262 (299)
25 4gpm_A Engineered protein OR26 100.0 5.9E-39 2E-43 219.6 15.8 158 37-219 7-164 (169)
26 3ljn_A Hypothetical protein; a 100.0 1.6E-39 5.3E-44 248.9 13.6 189 24-221 10-241 (364)
27 3jxi_A Vanilloid receptor-rela 100.0 1.6E-39 5.4E-44 238.0 12.6 211 3-220 7-254 (260)
28 1n11_A Ankyrin; clathrin, BAND 100.0 2.2E-39 7.4E-44 253.7 13.7 212 3-221 148-374 (437)
29 1wdy_A 2-5A-dependent ribonucl 100.0 7.1E-39 2.4E-43 237.1 15.6 213 2-221 6-250 (285)
30 4b93_B Ankyrin repeat domain-c 100.0 6.4E-40 2.2E-44 240.8 7.4 192 2-218 53-246 (269)
31 2fo1_E LIN-12 protein; beta-ba 100.0 4.3E-39 1.5E-43 247.1 12.3 209 2-217 126-372 (373)
32 1n11_A Ankyrin; clathrin, BAND 100.0 1.4E-38 4.8E-43 249.1 15.3 213 2-221 15-242 (437)
33 4g8k_A 2-5A-dependent ribonucl 100.0 1.1E-38 3.8E-43 241.8 13.9 211 2-220 60-330 (337)
34 4gpm_A Engineered protein OR26 100.0 8.4E-39 2.9E-43 218.9 11.6 161 2-187 5-165 (169)
35 3eu9_A Huntingtin-interacting 100.0 4.9E-38 1.7E-42 227.2 14.3 212 2-219 10-238 (240)
36 2f8y_A Notch homolog 1, transl 100.0 3E-38 1E-42 226.2 11.4 186 11-221 1-188 (223)
37 3d9h_A CDNA FLJ77766, highly s 100.0 1.5E-37 5.1E-42 230.4 15.1 192 2-219 16-218 (285)
38 2fo1_E LIN-12 protein; beta-ba 100.0 3.9E-38 1.3E-42 241.8 12.4 179 2-184 167-372 (373)
39 3utm_A Tankyrase-1; tankyrase, 100.0 1.7E-37 5.7E-42 236.2 14.9 196 2-221 25-277 (351)
40 2xai_A ASB-9, ankyrin repeat a 100.0 7.6E-38 2.6E-42 229.2 11.8 188 2-218 37-224 (261)
41 3b7b_A Euchromatic histone-lys 100.0 1.3E-37 4.5E-42 224.8 12.5 187 2-212 45-231 (237)
42 3eu9_A Huntingtin-interacting 100.0 4.2E-37 1.5E-41 222.2 14.5 178 2-186 43-238 (240)
43 2dzn_A Probable 26S proteasome 100.0 4.6E-37 1.6E-41 220.7 12.2 186 2-213 37-227 (228)
44 4hbd_A KN motif and ankyrin re 100.0 7.2E-37 2.5E-41 225.6 12.4 189 3-215 78-274 (276)
45 1oy3_D Transcription factor in 100.0 5.3E-37 1.8E-41 226.9 10.6 181 2-203 46-270 (282)
46 2rfm_A Putative ankyrin repeat 100.0 2.9E-35 9.8E-40 206.1 15.3 163 27-214 28-190 (192)
47 3kea_A K1L; tropism, ANK repea 100.0 5.1E-37 1.7E-41 227.5 6.7 188 2-222 63-252 (285)
48 3v30_A DNA-binding protein rfx 100.0 5.3E-35 1.8E-39 201.2 15.1 164 34-221 2-165 (172)
49 1ikn_D Protein (I-kappa-B-alph 100.0 3E-36 1E-40 217.6 9.1 173 29-221 3-181 (236)
50 3v31_A Ankyrin repeat family A 100.0 7E-35 2.4E-39 199.7 14.3 161 33-218 2-162 (167)
51 3f6q_A Integrin-linked protein 100.0 7.9E-35 2.7E-39 201.6 13.3 167 32-222 3-169 (179)
52 1ihb_A P18-INK4C(INK6), cyclin 100.0 5.5E-35 1.9E-39 199.2 11.7 158 33-216 4-162 (162)
53 2y1l_E Darpin-8.4; hydrolase-i 100.0 4.2E-34 1.4E-38 196.2 14.8 160 30-214 10-169 (169)
54 2rfa_A Transient receptor pote 100.0 8.9E-34 3E-38 204.1 16.7 167 33-218 2-185 (232)
55 2etb_A Transient receptor pote 100.0 1.8E-34 6E-39 210.8 12.5 175 33-217 1-207 (256)
56 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.3E-34 4.4E-39 197.4 10.4 158 1-183 5-162 (162)
57 2pnn_A Transient receptor pote 100.0 5.7E-34 1.9E-38 210.0 14.1 180 25-218 4-220 (273)
58 3v30_A DNA-binding protein rfx 100.0 1.1E-34 3.8E-39 199.6 9.1 168 2-194 3-171 (172)
59 3twr_A Tankyrase-2; ankyrin re 100.0 1.9E-34 6.6E-39 197.1 9.5 161 30-215 4-164 (165)
60 3hra_A Ankyrin repeat family p 100.0 2.5E-33 8.4E-38 197.5 15.4 167 32-221 3-175 (201)
61 1s70_B 130 kDa myosin-binding 100.0 2.7E-34 9.2E-39 214.2 10.9 204 2-213 74-286 (299)
62 1sw6_A Regulatory protein SWI6 100.0 4.9E-34 1.7E-38 215.4 10.0 187 2-202 132-327 (327)
63 1sw6_A Regulatory protein SWI6 100.0 1.3E-34 4.5E-39 218.5 5.7 184 5-221 101-313 (327)
64 2y1l_E Darpin-8.4; hydrolase-i 100.0 4.5E-33 1.5E-37 191.1 12.5 155 2-181 15-169 (169)
65 3v31_A Ankyrin repeat family A 100.0 3.1E-33 1E-37 191.5 10.9 160 2-186 4-163 (167)
66 1awc_B Protein (GA binding pro 100.0 1.3E-32 4.3E-37 185.8 13.3 151 34-210 2-152 (153)
67 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.1E-32 3.8E-37 186.7 12.5 154 34-213 2-155 (156)
68 2rfm_A Putative ankyrin repeat 100.0 7.1E-33 2.4E-37 193.9 11.7 155 2-181 36-190 (192)
69 1d9s_A Cyclin-dependent kinase 100.0 1.5E-32 5.1E-37 181.9 11.5 134 63-216 2-136 (136)
70 3jxi_A Vanilloid receptor-rela 100.0 2E-32 6.8E-37 200.3 12.0 177 32-218 3-212 (260)
71 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.6E-32 5.6E-37 198.4 9.2 164 31-220 2-168 (239)
72 1awc_B Protein (GA binding pro 100.0 4.1E-32 1.4E-36 183.3 10.4 150 2-177 3-152 (153)
73 3f6q_A Integrin-linked protein 100.0 1.6E-32 5.5E-37 190.0 8.5 165 2-191 6-171 (179)
74 2vge_A RELA-associated inhibit 100.0 1.7E-35 5.8E-40 212.5 -9.4 179 3-209 23-206 (229)
75 1bi7_B P16INK4A, MTS1, multipl 100.0 2.8E-31 9.4E-36 179.8 10.4 135 67-221 6-141 (156)
76 3twr_A Tankyrase-2; ankyrin re 100.0 8E-32 2.7E-36 184.1 7.5 155 2-182 9-164 (165)
77 1n0r_A 4ANK, 4 ankyrin repeats 100.0 4.3E-30 1.5E-34 167.6 14.6 126 72-216 1-126 (126)
78 4hbd_A KN motif and ankyrin re 100.0 2E-30 6.7E-35 191.3 14.0 169 30-221 72-247 (276)
79 1ycs_B 53BP2, P53BP2; ankyrin 100.0 5.7E-33 1.9E-37 200.8 0.3 187 2-216 6-204 (239)
80 1bd8_A P19INK4D CDK4/6 inhibit 100.0 3.2E-30 1.1E-34 174.5 12.4 152 2-180 3-155 (156)
81 2jab_A H10-2-G3; HER2, darpin, 100.0 9.4E-30 3.2E-34 168.4 12.4 127 69-214 10-136 (136)
82 2vge_A RELA-associated inhibit 100.0 1.2E-32 4.3E-37 197.5 -2.4 176 17-219 1-181 (229)
83 3t8k_A Uncharacterized protein 100.0 6.8E-31 2.3E-35 182.4 5.9 161 33-220 5-183 (186)
84 2aja_A Ankyrin repeat family p 100.0 4.6E-31 1.6E-35 201.4 -1.5 183 4-220 68-254 (376)
85 3t8k_A Uncharacterized protein 100.0 2.6E-29 9E-34 174.4 7.3 160 3-188 8-184 (186)
86 1bi7_B P16INK4A, MTS1, multipl 100.0 2.5E-29 8.6E-34 170.1 6.5 144 29-198 7-151 (156)
87 3c5r_A BARD-1, BRCA1-associate 100.0 4.6E-29 1.6E-33 165.2 7.4 131 68-217 5-135 (137)
88 2aja_A Ankyrin repeat family p 100.0 1.9E-30 6.4E-35 198.1 -0.7 186 2-215 93-343 (376)
89 3ehr_A Osteoclast-stimulating 100.0 2.1E-28 7.2E-33 174.9 8.6 136 67-221 67-203 (222)
90 1d9s_A Cyclin-dependent kinase 100.0 6.5E-29 2.2E-33 164.3 5.2 131 27-183 5-136 (136)
91 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.1E-26 3.7E-31 151.4 12.3 126 33-183 1-126 (126)
92 3aaa_C Myotrophin, protein V-1 99.9 4.6E-27 1.6E-31 152.7 9.9 118 70-206 4-121 (123)
93 3ui2_A Signal recognition part 99.9 1.3E-28 4.5E-33 178.4 1.9 163 8-216 22-185 (244)
94 2jab_A H10-2-G3; HER2, darpin, 99.9 1.3E-26 4.5E-31 153.2 10.7 127 30-181 10-136 (136)
95 3deo_A Signal recognition part 99.9 5.4E-27 1.8E-31 162.7 7.0 129 70-218 41-170 (183)
96 3deo_A Signal recognition part 99.9 1.8E-26 6.3E-31 160.0 8.5 141 30-213 40-181 (183)
97 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.5E-25 5.2E-30 138.3 11.2 93 123-216 1-93 (93)
98 3lvq_E ARF-GAP with SH3 domain 99.9 1.5E-25 5E-30 177.8 13.3 135 73-220 132-269 (497)
99 3c5r_A BARD-1, BRCA1-associate 99.9 1E-26 3.4E-31 153.9 4.4 134 24-183 1-134 (137)
100 1dcq_A PYK2-associated protein 99.9 7.5E-25 2.5E-29 161.4 13.4 133 73-218 130-265 (278)
101 2b0o_E UPLC1; arfgap, structur 99.9 1.3E-24 4.3E-29 161.8 12.3 135 72-219 150-287 (301)
102 3ui2_A Signal recognition part 99.9 2.8E-26 9.6E-31 166.1 3.4 152 33-213 14-166 (244)
103 2b0o_E UPLC1; arfgap, structur 99.9 2.8E-25 9.5E-30 165.4 7.9 139 35-204 152-299 (301)
104 3jue_A Arfgap with coiled-coil 99.9 1.5E-24 5.1E-29 165.0 11.8 127 71-216 197-326 (368)
105 3ehr_A Osteoclast-stimulating 99.9 1.7E-25 5.9E-30 159.8 5.8 138 29-191 68-206 (222)
106 2l6b_A NR1C; ankyrin, consensu 99.9 9.7E-25 3.3E-29 140.0 8.2 102 119-221 4-105 (115)
107 3aaa_C Myotrophin, protein V-1 99.9 7.6E-24 2.6E-28 137.4 11.5 101 120-221 3-103 (123)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.2E-23 7.5E-28 128.5 11.0 93 72-183 1-93 (93)
109 2l6b_A NR1C; ankyrin, consensu 99.9 6.3E-24 2.1E-28 136.2 8.0 109 68-195 4-112 (115)
110 3jue_A Arfgap with coiled-coil 99.9 2.3E-23 7.9E-28 158.5 11.3 162 33-219 198-367 (368)
111 3lvq_E ARF-GAP with SH3 domain 99.9 8.2E-23 2.8E-27 162.1 11.9 128 36-188 134-270 (497)
112 1dcq_A PYK2-associated protein 99.9 4.8E-22 1.6E-26 146.4 11.5 130 35-185 131-265 (278)
113 2zgd_A 3 repeat synthetic anky 99.8 7.1E-21 2.4E-25 120.9 10.2 91 119-210 19-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 1.3E-19 4.5E-24 115.0 9.2 93 66-177 17-109 (110)
115 1gp8_A Protein (scaffolding pr 72.5 1.1 3.9E-05 21.2 0.6 17 4-20 16-32 (40)
116 4g26_A Pentatricopeptide repea 53.0 32 0.0011 27.2 6.0 89 127-220 111-211 (501)
117 3mkq_B Coatomer subunit alpha; 47.5 60 0.0021 21.7 9.9 132 3-182 10-143 (177)
118 1vek_A UBP14, ubiquitin-specif 35.7 13 0.00046 21.3 1.0 16 205-220 60-75 (84)
119 2crn_A Ubash3A protein; compac 35.2 15 0.0005 19.9 1.1 14 206-219 41-54 (64)
120 3mkq_B Coatomer subunit alpha; 32.8 1.1E+02 0.0038 20.4 5.3 97 7-146 43-140 (177)
121 3gvo_A Pumilio 2, pumilio homo 31.7 64 0.0022 24.0 4.5 19 155-173 214-232 (351)
122 3zrh_A Ubiquitin thioesterase 31.3 1.5E+02 0.0051 23.0 6.1 47 133-179 31-90 (454)
123 3ktb_A Arsenical resistance op 30.8 43 0.0015 20.2 2.7 41 172-216 34-74 (106)
124 2dag_A Ubiquitin carboxyl-term 28.8 25 0.00086 19.6 1.4 9 173-181 41-49 (74)
125 3kgk_A Arsenical resistance op 26.9 42 0.0014 20.4 2.1 41 172-216 31-71 (110)
126 3zrh_A Ubiquitin thioesterase 24.9 2.1E+02 0.0072 22.2 5.9 49 166-214 30-92 (454)
127 2dai_A Ubadc1, ubiquitin assoc 23.5 33 0.0011 19.6 1.2 43 171-219 30-73 (83)
128 3spa_A Mtrpol, DNA-directed RN 23.2 41 0.0014 29.7 2.2 93 125-222 131-239 (1134)
No 1
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.1e-42 Score=257.39 Aligned_cols=213 Identities=19% Similarity=0.175 Sum_probs=183.2
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHH---HHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIK---RLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLH 78 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~---~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~ 78 (222)
.||||.|+..|+.++|++|++.|.+ .+..+..|.||||+ |+..|+.+++++|++ .+..++..+..|.||||
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~--A~~~g~~~~v~~Ll~----~ga~~~~~~~~g~tpL~ 83 (282)
T 1oy3_D 10 DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHL--AAILGEASTVEKLYA----AGAGVLVAERGGHTALH 83 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHH--HHHHTCHHHHHHHHH----TTCCSSCCCTTSCCHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHH--HHHcCCHHHHHHHHH----cCCCCCCCCCCCCCHHH
Confidence 5899999999999999999999988 66788899999999 999999999999988 45667888999999999
Q ss_pred HHHHhCCHHHHHHHHHhhhhhhhhhhH-------------h----------------hhhhhhHHHHhhhccccCchHhH
Q 027562 79 VAAKFGHSDIVRVLVERAKLLQHENEE-------------L----------------ESGIRTARHMIRMTNKEKNTALH 129 (222)
Q Consensus 79 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~-------------~----------------~~~~~~~~~~~~~~~~~~~~~l~ 129 (222)
+|+..|+.+++++|++.++........ . ...+......++..+..|.||||
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~ 163 (282)
T 1oy3_D 84 LACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLH 163 (282)
T ss_dssp HHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHH
T ss_pred HHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHH
Confidence 999999999999999987653221100 0 00001112335667889999999
Q ss_pred HHHhcCChHHHHHHHhcCCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHH
Q 027562 130 EAVCHQNVDVVEILTKEDPDYPYSAN-NDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFS 208 (222)
Q Consensus 130 ~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~ 208 (222)
+|+..|+.+++++|++.|+++. ..+ ..|+||||+|+..++.+++++|+++|++++.++..|.||||+|+..++.++++
T Consensus 164 ~A~~~g~~~~v~~Ll~~g~~~~-~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~ 242 (282)
T 1oy3_D 164 VAVIHKDAEMVRLLRDAGADLN-KPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILAR 242 (282)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTT-CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCC-CCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHH
Confidence 9999999999999999999944 555 45999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcccccc
Q 027562 209 YTLSVGISILISF 221 (222)
Q Consensus 209 ~Ll~~ga~~~~~~ 221 (222)
+|+++||+++.++
T Consensus 243 ~Ll~~ga~~~~~~ 255 (282)
T 1oy3_D 243 LLRAHGAPEPEDG 255 (282)
T ss_dssp HHHHTTCCCCCCC
T ss_pred HHHHcCCCcCcCC
Confidence 9999999999765
No 2
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=4.5e-42 Score=251.68 Aligned_cols=193 Identities=20% Similarity=0.197 Sum_probs=179.7
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAA 81 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~ 81 (222)
.||||.|+..|+.+++++|++.|.+++..+..|.||||+ |+..|+.+++++|++ .+..++..+..|.||||.|+
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~--A~~~g~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~ 77 (261)
T 2xai_A 4 WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHE--ACLGGHLSCVKILLK----HGAQVNGVTADWHTPLFNAC 77 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHH--HHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH--HHHcCCHHHHHHHHH----CCCCCCCCCCCCCCHHHHHH
Confidence 589999999999999999999999999899999999999 999999999999987 35678889999999999999
Q ss_pred HhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCH
Q 027562 82 KFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTP 161 (222)
Q Consensus 82 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 161 (222)
..|+.+++++|++.|++++. +..|.||+|+|+..|+.+++++|++.|++ .+..+..|.||
T Consensus 78 ~~~~~~~v~~Ll~~g~~~~~-------------------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~ 137 (261)
T 2xai_A 78 VSGSWDCVNLLLQHGASVQP-------------------ESDLASPIHEAARRGHVECVNSLIAYGGN-IDHKISHLGTP 137 (261)
T ss_dssp HHTCHHHHHHHHHTTCCSSC-------------------SCTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCBTTTBCH
T ss_pred HcCCHHHHHHHHHCCCCCCC-------------------CCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCcCCCCCCCH
Confidence 99999999999999987764 45699999999999999999999999998 66889999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCcccccc
Q 027562 162 LYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILISF 221 (222)
Q Consensus 162 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~ 221 (222)
||+|+..++.+++++|+++|++++. +..|.||||+|+..++.+++++|+++|+|+++.+
T Consensus 138 L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d 196 (261)
T 2xai_A 138 LYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKN 196 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 9999999999999999999999996 7789999999999999999999999999998865
No 3
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=3.4e-41 Score=242.24 Aligned_cols=197 Identities=19% Similarity=0.186 Sum_probs=180.0
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHH-hhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccc-cccCCChHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRL-LTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQ-VNAKGETPLHV 79 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~-~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~t~L~~ 79 (222)
+||||.|+..|+.+++++|++.+.+.. ..+..|.||||+ |+..|+.+++++|++... ...++. .+..|.||||.
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~--A~~~~~~~~v~~Ll~~~~--~~~~~~~~~~~g~t~L~~ 78 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHW--SVSFQAHEITSFLLSKME--NVNLDDYPDDSGWTPFHI 78 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHH--HHHTTCHHHHHHHHHTCT--TCCGGGCCCTTSCCHHHH
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHH--HHHcCCHHHHHHHHhccc--cccccccCCCCCCCHHHH
Confidence 689999999999999999999988776 478899999999 999999999999988421 133444 78899999999
Q ss_pred HHHhCCHHHHHHHHHhh--hhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCC
Q 027562 80 AAKFGHSDIVRVLVERA--KLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANND 157 (222)
Q Consensus 80 a~~~~~~~~~~~Ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 157 (222)
|+..|+.+++++|+++| .+++. .+..|.||||.|+..|+.+++++|++.|.+ .+..+..
T Consensus 79 A~~~~~~~~~~~Ll~~g~~~~~~~------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~ 139 (228)
T 2dzn_A 79 ACSVGNLEVVKSLYDRPLKPDLNK------------------ITNQGVTCLHLAVGKKWFEVSQFLIENGAS-VRIKDKF 139 (228)
T ss_dssp HHHHCCHHHHHHHHSSSSCCCTTC------------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTT
T ss_pred HHHcCCHHHHHHHHhCCCCccccc------------------CCcCCCCHHHHHHHcCCHhHHHHHHHcCCC-ccccCCC
Confidence 99999999999999998 55544 788999999999999999999999999999 6688999
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhcC-CCCccCCCCCccHHHHHHHhccchhHHHHH-hcCCcccccc
Q 027562 158 GKTPLYMAADYRSSDMVLALLENS-TSASHEGPNGKTALHAAAMKSYFGKFSYTL-SVGISILISF 221 (222)
Q Consensus 158 g~t~l~~a~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll-~~ga~~~~~~ 221 (222)
|+||||+|+..++.+++++|+++| ++++.++..|+||||+|+..++.+++++|+ ++|+++++.+
T Consensus 140 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~ 205 (228)
T 2dzn_A 140 NQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVD 205 (228)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccC
Confidence 999999999999999999999999 999999999999999999999999999999 9999999865
No 4
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.2e-41 Score=248.35 Aligned_cols=195 Identities=21% Similarity=0.183 Sum_probs=147.4
Q ss_pred ChHHHHHHHcC-------------CchhHHHHHHHHHHHH-hhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCcccc
Q 027562 2 DPNLFKAAAAG-------------NLEPFKDIAREVIKRL-LTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLL 67 (222)
Q Consensus 2 ~~~l~~A~~~g-------------~~~~v~~ll~~~~~~~-~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~ 67 (222)
.||||.|+..| +.+++++|++.|.+.+ ..+..|.||||+ |+..|+.+++++|++ .+..++
T Consensus 11 ~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~--A~~~g~~~~v~~Ll~----~g~~~~ 84 (253)
T 1yyh_A 11 FTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHL--AARYSRSDAAKRLLE----ASADAN 84 (253)
T ss_dssp -----------------------------------------CCCTTSCCHHHH--HHHTTCHHHHHHHHH----TTCCTT
T ss_pred CcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHH--HHHcCCHHHHHHHHH----cCCCCC
Confidence 48999999987 8999999999999886 458899999999 999999999999887 456678
Q ss_pred ccccCCChHHHHHHHhCCHHHHHHHHHhhh-hhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhc
Q 027562 68 QVNAKGETPLHVAAKFGHSDIVRVLVERAK-LLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKE 146 (222)
Q Consensus 68 ~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~ 146 (222)
..+..|.||||+|+..|+.+++++|++.+. .++. .+..|.||||+|+..|+.+++++|++.
T Consensus 85 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 146 (253)
T 1yyh_A 85 IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDA------------------RMHDGTTPLILAARLAVEGMLEDLINS 146 (253)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTC------------------CCTTCCCHHHHHHHHTCSSHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc------------------cCCCCCcHHHHHHHcChHHHHHHHHHc
Confidence 889999999999999999999999999886 5444 677888999999999999999999998
Q ss_pred CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCcccccc
Q 027562 147 DPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILISF 221 (222)
Q Consensus 147 ~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~ 221 (222)
|++ .+..+..|+||||+|+..++.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|+++++.+
T Consensus 147 g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d 220 (253)
T 1yyh_A 147 HAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITD 220 (253)
T ss_dssp TCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred CCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccc
Confidence 888 66778888999999999999999999999999999888889999999999999999999999999888764
No 5
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=4.2e-41 Score=242.26 Aligned_cols=195 Identities=22% Similarity=0.285 Sum_probs=175.4
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHH-HHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIK-RLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVA 80 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~-~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a 80 (222)
++||+.|+..|+.+.++++++.+.. .+..+..|.||||+ |+..|+.+++++|++. +..++..+..|.||||+|
T Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~--A~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A 80 (231)
T 3aji_A 7 NIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHW--ACSAGHTEIVEFLLQL----GVPVNDKDDAGWSPLHIA 80 (231)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHH--HHHHTCHHHHHHHHHT----TCCSCCCCTTSCCHHHHH
T ss_pred cchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHH--HHHcCcHHHHHHHHHh----CCCCCCcCCCCCCHHHHH
Confidence 6899999999999999999998654 34678899999999 9999999999999873 566788899999999999
Q ss_pred HHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCC
Q 027562 81 AKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKT 160 (222)
Q Consensus 81 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 160 (222)
+..|+.+++++|+++|++++. .+..|.||||+|+..++.+++++|++.|.+ ++..+..|.|
T Consensus 81 ~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t 141 (231)
T 3aji_A 81 ASAGXDEIVKALLVKGAHVNA------------------VNQNGCTPLHYAASKNRHEIAVMLLEGGAN-PDAKDHYDAT 141 (231)
T ss_dssp HHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred HHcCHHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCc
Confidence 999999999999999988776 678899999999999999999999999888 6677888999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCcccccc
Q 027562 161 PLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILISF 221 (222)
Q Consensus 161 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~ 221 (222)
|||+|+..++.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|+++++.+
T Consensus 142 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 202 (231)
T 3aji_A 142 AMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIEN 202 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCC
T ss_pred HHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999988764
No 6
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=3.1e-41 Score=241.69 Aligned_cols=195 Identities=18% Similarity=0.156 Sum_probs=182.0
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAA 81 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~ 81 (222)
.||||.|+..|+.+++++|++.|.+++..+..|.||||+ |+..|+.+++++|++ .....++..+..|.||||.|+
T Consensus 26 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~--A~~~~~~~~v~~Ll~---~~~~~~~~~~~~g~t~L~~A~ 100 (223)
T 2f8y_A 26 ETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHA--AVSADAQGVFQILIR---NRATDLDARMHDGTTPLILAA 100 (223)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH--HHHTTCHHHHHHHHH---BTTSCTTCCCTTCCCHHHHHH
T ss_pred CchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH--HHHcCCHHHHHHHHH---cCCCCcccCCCCCCcHHHHHH
Confidence 589999999999999999999999998899999999999 999999999999887 344467888999999999999
Q ss_pred HhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCH
Q 027562 82 KFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTP 161 (222)
Q Consensus 82 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 161 (222)
..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++.|++ ++..+..|.||
T Consensus 101 ~~~~~~~~~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~ 161 (223)
T 2f8y_A 101 RLAVEGMLEDLINSHADVNA------------------VDDLGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETP 161 (223)
T ss_dssp HHTCHHHHHHHHHTTCCTTC------------------BCTTSCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCH
T ss_pred HhCcHHHHHHHHHcCCCCcC------------------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCcCH
Confidence 99999999999999988776 788999999999999999999999999998 66889999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCccccc
Q 027562 162 LYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILIS 220 (222)
Q Consensus 162 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~ 220 (222)
||+|+..++.+++++|+++|++++.++..|.||+++|+..++.+++++|+++|+...-+
T Consensus 162 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~~~ 220 (223)
T 2f8y_A 162 LFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRSPQ 220 (223)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSCC-
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999987654
No 7
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2.2e-41 Score=244.57 Aligned_cols=195 Identities=22% Similarity=0.214 Sum_probs=182.2
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAA 81 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~ 81 (222)
.||||.|+..|+.+++++|++.|.+++..+..|.||||+ |+..|+.+++++|++ .+..++..+..|.||||.|+
T Consensus 12 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~--A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~ 85 (237)
T 3b7b_A 12 RSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLME--AAENNHLEAVKYLIK----AGALVDPKDAEGSTCLHLAA 85 (237)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHH--HHHTTCHHHHHHHHT----TTCCCCCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHH--HHHhCCHHHHHHHHh----CCCCCCCCCCCCCcHHHHHH
Confidence 589999999999999999999999998888999999999 999999999998886 45667888999999999999
Q ss_pred HhCCHHHHHHHHHhh-hhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCC
Q 027562 82 KFGHSDIVRVLVERA-KLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKT 160 (222)
Q Consensus 82 ~~~~~~~~~~Ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 160 (222)
..|+.+++++|++.+ ..++. .+..|.||+|+|+..++.+++++|++.|++ .+..+..|.|
T Consensus 86 ~~~~~~~~~~Ll~~~~~~~~~------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t 146 (237)
T 3b7b_A 86 KKGHYEVVQYLLSNGQMDVNC------------------QDDGGWTPMIWATEYKHVDLVKLLLSKGSD-INIRDNEENI 146 (237)
T ss_dssp HTTCHHHHHHHHTTTCCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred HcCCHHHHHHHHhCCCCCccc------------------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCccCCCCCC
Confidence 999999999999998 55544 788999999999999999999999999999 6688999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCcccccc
Q 027562 161 PLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILISF 221 (222)
Q Consensus 161 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~ 221 (222)
|||+|+..++.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|+++++.+
T Consensus 147 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d 207 (237)
T 3b7b_A 147 CLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKN 207 (237)
T ss_dssp HHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccC
Confidence 9999999999999999999999999999999999999999999999999999999998765
No 8
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=4.3e-41 Score=243.55 Aligned_cols=199 Identities=21% Similarity=0.259 Sum_probs=178.1
Q ss_pred ChHHHHHHHcCCchhHHHHHH----HHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAR----EVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPL 77 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~----~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L 77 (222)
+||||.|+..|+.+++++|++ .+.+++..+..|.||||+ |+..|+.+++++|++ .+..++..+..|.|||
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~--A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~l 83 (241)
T 1k1a_A 10 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHL--AVITTLPSVVRLLVT----AGASPMALDRHGQTAA 83 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHH--HHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHH--HHHcCCHHHHHHHHH----cCCCccccCCCCCCHH
Confidence 589999999999999999998 455666788899999999 999999999999987 4566778899999999
Q ss_pred HHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCC-C
Q 027562 78 HVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSAN-N 156 (222)
Q Consensus 78 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~ 156 (222)
|+|+..|+.+++++|++.+..... .++..+..|.||||+|+..|+.+++++|++.|++. +..+ .
T Consensus 84 ~~A~~~~~~~~~~~Ll~~~~~~~~--------------~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~ 148 (241)
T 1k1a_A 84 HLACEHRSPTCLRALLDSAAPGTL--------------DLEARNYDGLTALHVAVNTECQETVQLLLERGADI-DAVDIK 148 (241)
T ss_dssp HHHHHTTCHHHHHHHHHHSCTTSC--------------CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTT
T ss_pred HHHHHcCCHHHHHHHHHcCCCccc--------------cccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCc-cccccc
Confidence 999999999999999999872111 12237889999999999999999999999999994 4555 7
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCcccccc
Q 027562 157 DGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILISF 221 (222)
Q Consensus 157 ~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~ 221 (222)
.|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++..+
T Consensus 149 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 213 (241)
T 1k1a_A 149 SGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKN 213 (241)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcC
Confidence 89999999999999999999999999999999999999999999999999999999999998764
No 9
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-41 Score=248.45 Aligned_cols=194 Identities=24% Similarity=0.276 Sum_probs=151.8
Q ss_pred hHHHHHHHcCCchhHHHHHHHHHHH--------HhhhhcCCCchhHHhhhcccccc-cHHHHHHHHHhCCccccccccCC
Q 027562 3 PNLFKAAAAGNLEPFKDIAREVIKR--------LLTAKTKNTILHVNIRSKESENA-STKFVEEILEKCPLLLLQVNAKG 73 (222)
Q Consensus 3 ~~l~~A~~~g~~~~v~~ll~~~~~~--------~~~~~~g~~~L~~~~a~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~ 73 (222)
++|+.|+..|+.++|++|++.+.+. +..+..|.|||+. |+..+..+ +++.|+ ..+.+++..|..|
T Consensus 13 ~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~--a~~~~~~~~~v~~Ll----~~Gadvn~~d~~G 86 (269)
T 4b93_B 13 EKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQ--CPKCAPAQKRLAKVP----ASGLGVNVTSQDG 86 (269)
T ss_dssp HHHHHHHHTTCHHHHHHHHTCC----------------------------------------------CCCCTTCCCTTS
T ss_pred hHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHH--HHHhCCHHHHHHHHH----HCCCCCCCcCCCC
Confidence 6899999999999999999866542 3567789999999 77766643 444443 4677889999999
Q ss_pred ChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCC
Q 027562 74 ETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYS 153 (222)
Q Consensus 74 ~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~ 153 (222)
+||||+|+..|+.+++++|++.|++++. .+..|.||++.|+..++.+++++|++.|++ ++.
T Consensus 87 ~TpLh~A~~~g~~~~v~~Ll~~~a~~~~------------------~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~-~n~ 147 (269)
T 4b93_B 87 SSPLHVAALHGRADLIPLLLKHGANAGA------------------RNADQAVPLHLACQQGHFQVVKCLLDSNAK-PNK 147 (269)
T ss_dssp CCHHHHHHHTTCTTHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCC
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCCCcCc------------------cCCCCCCccccccccChHHHHHHHHHCCCC-CCC
Confidence 9999999999999999999999988776 788899999999999999999999999998 668
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCcccccc
Q 027562 154 ANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILISF 221 (222)
Q Consensus 154 ~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~ 221 (222)
.|..|+||||+|+..++.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|||+++.+
T Consensus 148 ~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d 215 (269)
T 4b93_B 148 KDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLN 215 (269)
T ss_dssp CCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCC
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 89999999999999999999999999999999999999999999999999999999999999998865
No 10
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=3e-41 Score=243.22 Aligned_cols=211 Identities=15% Similarity=0.119 Sum_probs=180.4
Q ss_pred ChHHHHHHHcCCchhHHHHHHH-HHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhC-CccccccccCCChHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIARE-VIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKC-PLLLLQVNAKGETPLHV 79 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~t~L~~ 79 (222)
+||||.|+..|+.+++++|++. |.+++..+..|.||||+ |+..|+.+++++|++..... ....+..+..|.||||+
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~--A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 4 ESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHI--AALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp TCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHH--HHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHH--HHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 6899999999999999999997 88888899999999999 99999999999999864331 11225567799999999
Q ss_pred HHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCC
Q 027562 80 AAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGK 159 (222)
Q Consensus 80 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~ 159 (222)
|+..|+.+++++|+++|++++..+.... .....+..+..|.||||+|+..|+.+++++|++.|++ ++..|..|+
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~-----~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~ 155 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSV-----FHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGAD-IRAQDSLGN 155 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGG-----GSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSC
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcc-----eeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCC
Confidence 9999999999999999998876432111 0111223456899999999999999999999999999 678899999
Q ss_pred CHHHHHHHcCCHHHH----HHHHhcCCCC------ccCCCCCccHHHHHHHhccchhHHHHHhcCCccccc
Q 027562 160 TPLYMAADYRSSDMV----LALLENSTSA------SHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILIS 220 (222)
Q Consensus 160 t~l~~a~~~~~~~~~----~~Ll~~g~~~------~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~ 220 (222)
||||+|+..++.+++ ++|+++|+++ +.++..|+||||+|+..|+.+++++|+++|+++...
T Consensus 156 t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~~ 226 (232)
T 2rfa_A 156 TVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAAA 226 (232)
T ss_dssp CHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC---
T ss_pred CHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccchhh
Confidence 999999999999988 9999999988 588999999999999999999999999999887654
No 11
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.1e-41 Score=248.57 Aligned_cols=193 Identities=19% Similarity=0.193 Sum_probs=175.8
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAA 81 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~ 81 (222)
.||||.|+..|+.+++++|++.|.+++..+..|.||||+ |+..|+.+++++|++ .+..++..+..|.||||+|+
T Consensus 60 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~--A~~~g~~~~v~~Ll~----~ga~~~~~~~~g~t~L~~A~ 133 (285)
T 3d9h_A 60 WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHE--ACLGGHLSCVKILLK----HGAQVNGVTADWHTPLFNAC 133 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHH--HHHTTCHHHHHHHHH----TTCCSSCCCTTCCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH--HHHCCcHHHHHHHHH----CCCCCCCCCCCCCCHHHHHH
Confidence 489999999999999999999999988899999999999 999999999999987 35677888999999999999
Q ss_pred HhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCH
Q 027562 82 KFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTP 161 (222)
Q Consensus 82 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 161 (222)
..|+.+++++|++.|++++. +..|.||||+|+..|+.+++++|++.|++ .+..|..|.||
T Consensus 134 ~~~~~~~v~~Ll~~g~~~~~-------------------~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~ 193 (285)
T 3d9h_A 134 VSGSWDCVNLLLQHGASVQP-------------------ESDLASPIHEAARRGHVECVNSLIAYGGN-IDHKISHLGTP 193 (285)
T ss_dssp HHTCHHHHHHHHHTTCCSSC-------------------SCTTSCHHHHHHHHTCHHHHHHHHHTTCC-TTCCBTTTBCH
T ss_pred HcCHHHHHHHHHHCCCCCCC-------------------CCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCH
Confidence 99999999999999987664 34589999999999999999999999988 66788899999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCcccccc
Q 027562 162 LYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILISF 221 (222)
Q Consensus 162 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~ 221 (222)
||+|+..++.+++++|+++|++++. +..|.||||+|+..++.+++++|+++|+++++.+
T Consensus 194 L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d 252 (285)
T 3d9h_A 194 LYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKN 252 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 9999999999999999999999985 7789999999999999999999999999998765
No 12
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2.3e-41 Score=250.85 Aligned_cols=192 Identities=18% Similarity=0.120 Sum_probs=177.1
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAA 81 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~ 81 (222)
.||||+|+..|+.+++++|++.|.+++.. +|.||||+ |+..|+.+++++|++ .+..++..+..|.||||+|+
T Consensus 32 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~--A~~~g~~~~v~~Ll~----~ga~~~~~d~~g~t~L~~A~ 103 (285)
T 3kea_A 32 HSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQ--AATLEDTKIVKILLF----SGLDDSQFDDKGNTALYYAV 103 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHH--HTTSSSCHHHHHHHH----TTCCTTCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHH--HHHcCCHHHHHHHHH----CCCCCCCcCCCCCcHHHHHH
Confidence 48999999999999999999999988655 59999999 999999999999988 46668889999999999999
Q ss_pred HhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccC-chHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCC
Q 027562 82 KFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEK-NTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKT 160 (222)
Q Consensus 82 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 160 (222)
..|+.+++++|+++|++++. .+..| .||||+|+..|+.+++++|++.|++.. ....|.|
T Consensus 104 ~~g~~~~v~~Ll~~ga~~~~------------------~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t 163 (285)
T 3kea_A 104 DSGNMQTVKLFVKKNWRLMF------------------YGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF--DLAILLS 163 (285)
T ss_dssp HTTCHHHHHHHHHHCGGGGG------------------CSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTC--CCSTHHH
T ss_pred HcCCHHHHHHHHhcCCCCCc------------------cCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccc--cccCCcc
Confidence 99999999999999998776 78888 899999999999999999999998732 1238899
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccH-HHHHHHhccchhHHHHHhcCCcccccc
Q 027562 161 PLYMAADYRSSDMVLALLENSTSASHEGPNGKTA-LHAAAMKSYFGKFSYTLSVGISILISF 221 (222)
Q Consensus 161 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~-l~~a~~~~~~~~~~~Ll~~ga~~~~~~ 221 (222)
|||+|+..++.+++++|+++|++++.++..|+|| ||+|+..++.+++++|+++|++++..+
T Consensus 164 ~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~ 225 (285)
T 3kea_A 164 CIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSAN 225 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTT
T ss_pred HHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 9999999999999999999999999999999998 999999999999999999999999864
No 13
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-40 Score=246.60 Aligned_cols=212 Identities=18% Similarity=0.148 Sum_probs=164.1
Q ss_pred hHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHH
Q 027562 3 PNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAK 82 (222)
Q Consensus 3 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~ 82 (222)
||||.|+..|+.+++++|++.|.+++..+..|.||||+ |+..|+.+++++|++ .+..++..+..|.||||.|+.
T Consensus 41 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~--A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~ 114 (285)
T 1wdy_A 41 TPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLL--AAIAGSVKLLKLFLS----KGADVNECDFYGFTAFMEAAV 114 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH--HHHHTCHHHHHHHHH----TTCCTTCBCTTCCBHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHH--HHHcCCHHHHHHHHH----cCCCCCccCcccCCHHHHHHH
Confidence 67777777777777777777777766666677777777 777777777776666 344566677777788888887
Q ss_pred hCCHHHHHHHHHhhhhhhhh----------hhHhhhhhhhH----------------HHHhhhccccCchHhHHHHhcCC
Q 027562 83 FGHSDIVRVLVERAKLLQHE----------NEELESGIRTA----------------RHMIRMTNKEKNTALHEAVCHQN 136 (222)
Q Consensus 83 ~~~~~~~~~Ll~~~~~~~~~----------~~~~~~~~~~~----------------~~~~~~~~~~~~~~l~~a~~~~~ 136 (222)
.|+.+++++|++.|++++.. +..+.+++... ...++..+..|.||+|+|+..++
T Consensus 115 ~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 194 (285)
T 1wdy_A 115 YGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSD 194 (285)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSC
T ss_pred hCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccc
Confidence 77778888887777766543 11111222111 22234567788899999998888
Q ss_pred ----hHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCccCCCCCccHHHHHHHhccchhHHHHH
Q 027562 137 ----VDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLE-NSTSASHEGPNGKTALHAAAMKSYFGKFSYTL 211 (222)
Q Consensus 137 ----~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 211 (222)
.+++++|++.|.+ ++..+..|.||||+|+..++.+++++|++ .|++++.++..|.||||+|+..++.+++++|+
T Consensus 195 ~~~~~~i~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll 273 (285)
T 1wdy_A 195 DSDVEAITHLLLDHGAD-VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLC 273 (285)
T ss_dssp TTTHHHHHHHHHHTTCC-SSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred cchHHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHH
Confidence 8889999999888 66788899999999999999999999998 89999999999999999999999999999999
Q ss_pred hcCCcccccc
Q 027562 212 SVGISILISF 221 (222)
Q Consensus 212 ~~ga~~~~~~ 221 (222)
++||++++.+
T Consensus 274 ~~Ga~~~~~d 283 (285)
T 1wdy_A 274 KRGASTDCGD 283 (285)
T ss_dssp HHSSCSCCSS
T ss_pred HcCCCCCccc
Confidence 9999999876
No 14
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.4e-40 Score=253.10 Aligned_cols=213 Identities=22% Similarity=0.172 Sum_probs=185.8
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAA 81 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~ 81 (222)
.||||.|+..|+.+++++|++.|.+++..+..|.||||+ |+..|+.+++++|++ .+..++..+..|.||||+|+
T Consensus 59 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~--A~~~g~~~iv~~Ll~----~g~~~~~~~~~g~t~L~~A~ 132 (351)
T 3utm_A 59 STPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHN--ACSYGHYEVTELLLK----HGACVNAMDLWQFTPLHEAA 132 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH--HHHTTCHHHHHHHHH----TTCCTTCCCTTCCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHH--HHHCCCHHHHHHHHH----CCCCCCCCCCCCCCHHHHHH
Confidence 489999999999999999999999998889999999999 999999999999987 35667888999999999999
Q ss_pred HhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhH------------------------------HHH------hhhccccCc
Q 027562 82 KFGHSDIVRVLVERAKLLQHENEELESGIRTA------------------------------RHM------IRMTNKEKN 125 (222)
Q Consensus 82 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~------------------------------~~~------~~~~~~~~~ 125 (222)
..|+.+++++|+++|++++..+..+.+++... ... ....+..|.
T Consensus 133 ~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 212 (351)
T 3utm_A 133 SKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHE 212 (351)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCC
T ss_pred HcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCC
Confidence 99999999999999988776554333222111 000 012456789
Q ss_pred hHhHHHHhc---CChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhc
Q 027562 126 TALHEAVCH---QNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKS 202 (222)
Q Consensus 126 ~~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~ 202 (222)
||+|+|+.. +..+++++|++.|.+ .+..+..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 213 t~L~~A~~~~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~ 291 (351)
T 3utm_A 213 TALHCAVASLHPKRKQVAELLLRKGAN-VNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAG 291 (351)
T ss_dssp CHHHHHHHCCSTTHHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CHHHHHHHHhCccHHHHHHHHHHcCCC-cCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC
Confidence 999999998 568999999999999 6688999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHhcCCcccccc
Q 027562 203 YFGKFSYTLSVGISILISF 221 (222)
Q Consensus 203 ~~~~~~~Ll~~ga~~~~~~ 221 (222)
+.+++++|+++|+++++.+
T Consensus 292 ~~~~v~~Ll~~gad~~~~~ 310 (351)
T 3utm_A 292 HLQTCRLLLSYGSDPSIIS 310 (351)
T ss_dssp CHHHHHHHHHTTCCTTCCC
T ss_pred cHHHHHHHHHcCCCCCCcC
Confidence 9999999999999999865
No 15
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=6.3e-41 Score=241.34 Aligned_cols=191 Identities=22% Similarity=0.177 Sum_probs=180.1
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAA 81 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~ 81 (222)
.||||.|+..|+.+++++|++.|.+++..+..|.||||+ |+..|+.+++++|++ .+..++..+..|.||||.|+
T Consensus 41 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~--A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~ 114 (231)
T 3aji_A 41 RTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHI--AASAGXDEIVKALLV----KGAHVNAVNQNGCTPLHYAA 114 (231)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHH--HHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHH--HHHcCHHHHHHHHHH----cCCCCCCCCCCCCCHHHHHH
Confidence 589999999999999999999999988889999999999 999999999999887 45667888999999999999
Q ss_pred HhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCH
Q 027562 82 KFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTP 161 (222)
Q Consensus 82 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 161 (222)
..|+.+++++|++.|.+++. .+..|.||+|+|+..|+.+++++|++.|.+ .+..|..|+||
T Consensus 115 ~~~~~~~~~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~ 175 (231)
T 3aji_A 115 SKNRHEIAVMLLEGGANPDA------------------KDHYDATAMHRAAAKGNLKMVHILLFYKAS-TNIQDTEGNTP 175 (231)
T ss_dssp HTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCH
T ss_pred HcCCHHHHHHHHHcCCCCCC------------------cCCCCCcHHHHHHHcCCHHHHHHHHhcCCC-ccccCCCCCCH
Confidence 99999999999999988766 788999999999999999999999999999 66889999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCcc
Q 027562 162 LYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISI 217 (222)
Q Consensus 162 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~ 217 (222)
||+|+..++.+++++|+++|++++.++..|.||+++|+..++.+++++|+++|+++
T Consensus 176 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~i 231 (231)
T 3aji_A 176 LHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEASM 231 (231)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHccccccC
Confidence 99999999999999999999999999999999999999999999999999999875
No 16
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=3.9e-40 Score=242.93 Aligned_cols=212 Identities=19% Similarity=0.182 Sum_probs=172.4
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHH--------hhhhcCCCchhHHhhhcc---cccccHHHHHHHHHhCCc------
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRL--------LTAKTKNTILHVNIRSKE---SENASTKFVEEILEKCPL------ 64 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~--------~~~~~g~~~L~~~~a~~~---~~~~~~~~l~~~~~~~~~------ 64 (222)
.||||.|+..|+.++|+.|++.+.+.. ..+..|.||||+ |+.. |+.+++++|++.......
T Consensus 14 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~--A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~ 91 (273)
T 2pnn_A 14 RRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLK--AMLNLHNGQNDTIALLLDVARKTDSLKQFVN 91 (273)
T ss_dssp HHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHH--HHHSCBTTBCHHHHHHHHHHHHTTCHHHHHT
T ss_pred chHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHH--HHHHHhcCChHHHHHHHHhhccccchhHHhh
Confidence 489999999999999999999876543 247799999999 7765 999999999998654321
Q ss_pred -cccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHH
Q 027562 65 -LLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEIL 143 (222)
Q Consensus 65 -~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L 143 (222)
.....+..|.||||+|+..|+.+++++|+++|++++..+..... ........+..|.||||+|+..|+.+++++|
T Consensus 92 ~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~----~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 167 (273)
T 2pnn_A 92 ASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFF----KKTKGRPGFYFGELPLSLAACTNQLAIVKFL 167 (273)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGG----SSCSSSCCCCSCBSHHHHHHHTTCHHHHHHH
T ss_pred cccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcccccccc----ccccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 12225678999999999999999999999999988773221000 0000111223799999999999999999999
Q ss_pred Hh---cCCCCCCCCCCCCCCHHHHHHHcCC---------HHHHHHHHhcCCCCc-------cCCCCCccHHHHHHHhccc
Q 027562 144 TK---EDPDYPYSANNDGKTPLYMAADYRS---------SDMVLALLENSTSAS-------HEGPNGKTALHAAAMKSYF 204 (222)
Q Consensus 144 l~---~~~~~~~~~~~~g~t~l~~a~~~~~---------~~~~~~Ll~~g~~~~-------~~~~~g~t~l~~a~~~~~~ 204 (222)
++ .|++ ++..|..|+||||+|+..++ .+++++|+++|++++ .++..|+||||+|+..|+.
T Consensus 168 l~~~~~gad-~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~ 246 (273)
T 2pnn_A 168 LQNSWQPAD-ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKI 246 (273)
T ss_dssp HHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HhcccCCCC-ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChH
Confidence 99 8888 67889999999999999888 799999999999996 4899999999999999999
Q ss_pred hhHHHHHhcCC-ccccc
Q 027562 205 GKFSYTLSVGI-SILIS 220 (222)
Q Consensus 205 ~~~~~Ll~~ga-~~~~~ 220 (222)
+++++|+++|| |+...
T Consensus 247 ~iv~~Ll~~ga~dp~~~ 263 (273)
T 2pnn_A 247 GVLAYILQREIHEPECR 263 (273)
T ss_dssp HHHHHHHHHHTC-----
T ss_pred HHHHHHHHCCCCCchhh
Confidence 99999999999 77654
No 17
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=5.3e-40 Score=239.68 Aligned_cols=191 Identities=18% Similarity=0.149 Sum_probs=176.4
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAA 81 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~ 81 (222)
.||||.|+..|+.+++++|++.|.+++..+..|.||||+ |+..|+.+++++|++. ....++..+..|.||||+|+
T Consensus 58 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~--A~~~~~~~~v~~Ll~~---~~~~~~~~~~~g~t~L~~A~ 132 (253)
T 1yyh_A 58 ETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHA--AVSADAQGVFQILIRN---RATDLDARMHDGTTPLILAA 132 (253)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH--HHHHTCHHHHHHHHHS---TTSCTTCCCTTCCCHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH--HHHcCCHHHHHHHHHc---CCCCccccCCCCCcHHHHHH
Confidence 489999999999999999999999999899999999999 9999999999998773 44467888999999999999
Q ss_pred HhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCH
Q 027562 82 KFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTP 161 (222)
Q Consensus 82 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 161 (222)
..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++.|++ .+..+..|.||
T Consensus 133 ~~~~~~~v~~Ll~~g~~~~~------------------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tp 193 (253)
T 1yyh_A 133 RLAVEGMLEDLINSHADVNA------------------VDDLGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETP 193 (253)
T ss_dssp HHTCSSHHHHHHHTTCCTTC------------------BCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred HcChHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCH
Confidence 99999999999999988776 788999999999999999999999999999 66889999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCc
Q 027562 162 LYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGIS 216 (222)
Q Consensus 162 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~ 216 (222)
||+|+..++.+++++|+++|++++.+|..|.||+++|+..|+.+++++|......
T Consensus 194 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~~ 248 (253)
T 1yyh_A 194 LFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHH 248 (253)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC----
T ss_pred HHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999876543
No 18
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=8e-40 Score=248.08 Aligned_cols=98 Identities=14% Similarity=0.091 Sum_probs=85.4
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhh-hcCCCchhHHhhhcccccccHHHHHHHHH--------------------
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTA-KTKNTILHVNIRSKESENASTKFVEEILE-------------------- 60 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~-~~g~~~L~~~~a~~~~~~~~~~~l~~~~~-------------------- 60 (222)
+|+|+.|+++|++++|++|++.|++++..+ ..|.||||+ |+..|+.+++++|++...
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~--A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 103 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHN--AVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAG 103 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHH--HHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred ChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHH--HHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcc
Confidence 479999999999999999999999998655 469999999 999999999999987532
Q ss_pred ---------hCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhh
Q 027562 61 ---------KCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQH 101 (222)
Q Consensus 61 ---------~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~ 101 (222)
.....++..+..|.||||.|+..|+.++++++++.|++++.
T Consensus 104 ~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~ 153 (337)
T 4g8k_A 104 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNL 153 (337)
T ss_dssp CHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred cchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcch
Confidence 12345677888999999999999999999999999987765
No 19
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=6.4e-40 Score=239.63 Aligned_cols=210 Identities=19% Similarity=0.091 Sum_probs=174.1
Q ss_pred ChHHHHHHHcCCchhHH----HHHHHHHHHHh----hhhcCCCchhHHhhhcc---cccccHHHHHHHHHhCCcc---c-
Q 027562 2 DPNLFKAAAAGNLEPFK----DIAREVIKRLL----TAKTKNTILHVNIRSKE---SENASTKFVEEILEKCPLL---L- 66 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~----~ll~~~~~~~~----~~~~g~~~L~~~~a~~~---~~~~~~~~l~~~~~~~~~~---~- 66 (222)
.||||.|+..|+.+.|+ +|++.|.+++. .+..|.||||+ |+.. |+.+++++|++........ +
T Consensus 3 ~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~--A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 3 RDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMK--AVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHH--HHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred ccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHH--HHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 48999999999998654 55557777776 78899999999 8888 9999999999986654311 1
Q ss_pred ---cccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHH
Q 027562 67 ---LQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEIL 143 (222)
Q Consensus 67 ---~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L 143 (222)
...|..|.||||+|+..|+.+++++|+++|++++.++...... ......+..|.||||+|+..|+.+++++|
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~-----~~~~~~~~~g~tpL~~A~~~~~~~~v~~L 155 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQ-----KHQGTCFYFGELPLSLAACTKQWDVVTYL 155 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGS-----CCSSSCCCSCSSHHHHHHHTTCHHHHHHH
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccccccccc-----ccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 1234679999999999999999999999999887732211100 00011223499999999999999999999
Q ss_pred Hh---cCCCCCCCCCCCCCCHHHHHHH--cCCHH-------HHHHHHhcCCCC-------ccCCCCCccHHHHHHHhccc
Q 027562 144 TK---EDPDYPYSANNDGKTPLYMAAD--YRSSD-------MVLALLENSTSA-------SHEGPNGKTALHAAAMKSYF 204 (222)
Q Consensus 144 l~---~~~~~~~~~~~~g~t~l~~a~~--~~~~~-------~~~~Ll~~g~~~-------~~~~~~g~t~l~~a~~~~~~ 204 (222)
++ .|++ ++..|..|+||||+|+. .++.+ ++++|+++|+++ +.+|..|+||||+|+..|+.
T Consensus 156 l~~~~~ga~-~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~ 234 (256)
T 2etb_A 156 LENPHQPAS-LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKI 234 (256)
T ss_dssp HHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HhccccCCC-cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCH
Confidence 99 8998 67889999999999998 78888 999999999999 89999999999999999999
Q ss_pred hhHHHHHhcCCcccc
Q 027562 205 GKFSYTLSVGISILI 219 (222)
Q Consensus 205 ~~~~~Ll~~ga~~~~ 219 (222)
+++++|+++|+++..
T Consensus 235 ~~v~~Ll~~g~~~~~ 249 (256)
T 2etb_A 235 EIFRHILQREFSGAA 249 (256)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCC
Confidence 999999999987653
No 20
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=1.2e-39 Score=229.83 Aligned_cols=189 Identities=21% Similarity=0.220 Sum_probs=173.3
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHH-HHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVI-KRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVA 80 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~-~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a 80 (222)
.||||.|+..|+.+.+++|++.+. +++..+..|.||||+ |+..|+.+++++|++ .+..++..+..|.||||.|
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~--A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~l~~A 79 (201)
T 3hra_A 6 VGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNI--AVHNNDIEIAKALID----RGADINLQNSISDSPYLYA 79 (201)
T ss_dssp TTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHH--HHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHH
T ss_pred ccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHH--HHHcCCHHHHHHHHH----cCCCCCCCCCCCCCHHHHH
Confidence 479999999999999999999776 777888999999999 999999999999987 4667788999999999999
Q ss_pred HHhCCHHHHHHHHHh-hhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCC
Q 027562 81 AKFGHSDIVRVLVER-AKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGK 159 (222)
Q Consensus 81 ~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~ 159 (222)
+..|+.+++++|++. +.+++. .+..|.||||+|+..|+.+++++|++.|....+..+..|+
T Consensus 80 ~~~~~~~~~~~Ll~~~~~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~ 141 (201)
T 3hra_A 80 GAQGRTEILAYMLKHATPDLNK------------------HNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGY 141 (201)
T ss_dssp HHTTCHHHHHHHHHHSCCCTTC------------------CCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSC
T ss_pred HHcCCHHHHHHHHhccCccccc------------------ccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCC
Confidence 999999999999954 445444 7889999999999999999999999999433778899999
Q ss_pred CHHHHHHHcCC-----HHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcC
Q 027562 160 TPLYMAADYRS-----SDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVG 214 (222)
Q Consensus 160 t~l~~a~~~~~-----~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 214 (222)
||||+|+..++ .+++++|+++|++++.++..|.||||+|+..++.+++++|+++|
T Consensus 142 t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 142 TALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp CHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 99999999988 99999999999999999999999999999999999999999987
No 21
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=5e-41 Score=242.66 Aligned_cols=198 Identities=20% Similarity=0.198 Sum_probs=175.7
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHH----HHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIK----RLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPL 77 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~----~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L 77 (222)
.||||.|+..|+.+++++|++.+.. ++..+..|.||||+ |+..|+.+++++|++ .+..++..+..|.|||
T Consensus 9 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~--A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L 82 (236)
T 1ikn_D 9 DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHL--AVITNQPEIAEALLG----AGCDPELRDFRGNTPL 82 (236)
T ss_dssp CCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHH--HHHTTCHHHHHCCCS----CCCCSCCCCTTCCCHH
T ss_pred CchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHH--HHHcCCHHHHHHHHH----cCCCCCCcCCCCCCHH
Confidence 5899999999999999999998764 56788899999999 999999999988876 4667888999999999
Q ss_pred HHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCC-
Q 027562 78 HVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANN- 156 (222)
Q Consensus 78 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~- 156 (222)
|+|+..|+.+++++|++.++..... ..++..+..|.||||+|+..|+.+++++|++.|++ .+..+.
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~ 149 (236)
T 1ikn_D 83 HLACEQGCLASVGVLTQSCTTPHLH------------SILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD-VNAQEPC 149 (236)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSS------------CGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTT
T ss_pred HHHHHcCCHHHHHHHHhcccchhHH------------HHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCC
Confidence 9999999999999999998753221 11334788899999999999999999999999999 556666
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCccc
Q 027562 157 DGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISIL 218 (222)
Q Consensus 157 ~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~ 218 (222)
.|+||||+|+..++.+++++|+++|++++.++..|.|||++|+..++.+++++|+++|+++.
T Consensus 150 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 150 NGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999876
No 22
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=8.5e-40 Score=250.36 Aligned_cols=211 Identities=17% Similarity=0.198 Sum_probs=169.5
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAA 81 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~ 81 (222)
.||||.|+..|+.++|++|++.|.+++..+..|.||||+ |+..|+.+++++|++... +..+..|.||||+|+
T Consensus 21 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~--A~~~g~~~~v~~Ll~~g~------~~~~~~g~t~L~~A~ 92 (364)
T 3ljn_A 21 MEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHL--ACKFGCVDTAKYLASVGE------VHSLWHGQKPIHLAV 92 (364)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHH--HHHHCCHHHHHHHHHHCC------CCCCBTTBCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHH--HHHcCCHHHHHHHHHCCC------CccccCCCCHHHHHH
Confidence 379999999999999999999998888888899999999 899999999999888532 223346788888888
Q ss_pred HhCCHHHHHHHHHh----hhhhhh-----------------hhhHhhhhhh-----------------hHHHHhhhcccc
Q 027562 82 KFGHSDIVRVLVER----AKLLQH-----------------ENEELESGIR-----------------TARHMIRMTNKE 123 (222)
Q Consensus 82 ~~~~~~~~~~Ll~~----~~~~~~-----------------~~~~~~~~~~-----------------~~~~~~~~~~~~ 123 (222)
..|+.+++++|++. |..++. .+..+.+++. .....++..+..
T Consensus 93 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~ 172 (364)
T 3ljn_A 93 MANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKA 172 (364)
T ss_dssp HTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTT
T ss_pred HcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCC
Confidence 88888888888887 443333 2111111111 112234457888
Q ss_pred CchHhHHHHhcCChHHHHHHHhcCCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHH
Q 027562 124 KNTALHEAVCHQNVDVVEILTKEDPDY----PYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAA 199 (222)
Q Consensus 124 ~~~~l~~a~~~~~~~~~~~Ll~~~~~~----~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~ 199 (222)
|.||||+|+..|+.+++++|++.|++. .+..+..|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+
T Consensus 173 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~ 252 (364)
T 3ljn_A 173 DETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSV 252 (364)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 999999999999999999999988762 4567888999999999999999999999999999999999999999999
Q ss_pred HhccchhHHHHHhcCCccccc
Q 027562 200 MKSYFGKFSYTLSVGISILIS 220 (222)
Q Consensus 200 ~~~~~~~~~~Ll~~ga~~~~~ 220 (222)
..|+.+++++|+++|++++++
T Consensus 253 ~~g~~~~v~~Ll~~~~~~~~~ 273 (364)
T 3ljn_A 253 RAAMVLLTKELLQKTDVFLIQ 273 (364)
T ss_dssp HTCCHHHHHHHHHHSCHHHHH
T ss_pred HhChHHHHHHHHHcCCchhhh
Confidence 999999999999999987653
No 23
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=2.2e-40 Score=239.87 Aligned_cols=194 Identities=17% Similarity=0.160 Sum_probs=175.5
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAA 81 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~ 81 (222)
.||||.|+..|+.+++++|++.|.+++..+..|.||||+ |+..++.+++++|++........++..+..|.||||.|+
T Consensus 47 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~--A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~ 124 (241)
T 1k1a_A 47 QTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHL--ACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAV 124 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH--HHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHH--HHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHH
Confidence 489999999999999999999999998889999999999 999999999999998755444577888999999999999
Q ss_pred HhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhcc-ccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCC
Q 027562 82 KFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTN-KEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKT 160 (222)
Q Consensus 82 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 160 (222)
..|+.+++++|++.|++++. .+ ..|.||||+|+..|+.+++++|++.|++ ++..+..|+|
T Consensus 125 ~~~~~~~~~~Ll~~g~~~~~------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t 185 (241)
T 1k1a_A 125 NTECQETVQLLLERGADIDA------------------VDIKSGRSPLIHAVENNSLSMVQLLLQHGAN-VNAQMYSGSS 185 (241)
T ss_dssp HHTCHHHHHHHHHTTCCTTC------------------CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCBCTTSCB
T ss_pred HcCCHHHHHHHHHcCCCccc------------------ccccCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCC
Confidence 99999999999999988776 55 7899999999999999999999999999 6688999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCc
Q 027562 161 PLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGIS 216 (222)
Q Consensus 161 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~ 216 (222)
|||+|+..++.+++++|+++|++++.++..|.||+++|+..++.++++.|++++++
T Consensus 186 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~aS 241 (241)
T 1k1a_A 186 ALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPAS 241 (241)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC-------
T ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999874
No 24
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=9.8e-40 Score=243.66 Aligned_cols=196 Identities=19% Similarity=0.143 Sum_probs=164.8
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAA 81 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~ 81 (222)
+|+|+.|+..|+.++|++|++.|.+++..+..|.||||+ |+..|+.+++++|++ .+..++..+..|.||||+|+
T Consensus 41 ~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~--A~~~g~~~~v~~Ll~----~ga~~~~~~~~g~tpL~~A~ 114 (299)
T 1s70_B 41 GAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQ--ACIDDNVDMVKFLVE----NGANINQPDNEGWIPLHAAA 114 (299)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHH--HHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHH--HHHcCCHHHHHHHHH----CCCCCCCCCCCCCcHHHHHH
Confidence 379999999999999999999999999899999999999 999999999999988 45678888999999999999
Q ss_pred HhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhc-CC------------
Q 027562 82 KFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKE-DP------------ 148 (222)
Q Consensus 82 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~-~~------------ 148 (222)
..|+.+++++|+++|++++. .+..|.||+|+|+..+..+++++++.. +.
T Consensus 115 ~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~ 176 (299)
T 1s70_B 115 SCGYLDIAEYLISQGAHVGA------------------VNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERI 176 (299)
T ss_dssp HHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHhCCCCCCC------------------cCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhH
Confidence 99999999999999988776 677788888888877777777766542 21
Q ss_pred -------------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCC
Q 027562 149 -------------DYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGI 215 (222)
Q Consensus 149 -------------~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga 215 (222)
......+..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 177 ~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 256 (299)
T 1s70_B 177 MLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLC 256 (299)
T ss_dssp HHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCC
Confidence 1122345678888888888888888888888888888888888888888888888888888888888
Q ss_pred cccccc
Q 027562 216 SILISF 221 (222)
Q Consensus 216 ~~~~~~ 221 (222)
++++.+
T Consensus 257 d~~~~d 262 (299)
T 1s70_B 257 DMEAVN 262 (299)
T ss_dssp CTTCCC
T ss_pred CCCCcC
Confidence 887654
No 25
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=5.9e-39 Score=219.63 Aligned_cols=158 Identities=23% Similarity=0.308 Sum_probs=137.6
Q ss_pred chhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHH
Q 027562 37 ILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHM 116 (222)
Q Consensus 37 ~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 116 (222)
+|+. |++.|+.++++.|++ .+.+++.+|..|+||||.|+..++.+++++|++.|++++.
T Consensus 7 ~L~~--Aa~~G~~~~v~~Ll~----~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~--------------- 65 (169)
T 4gpm_A 7 RLIE--AAENGNKDRVKDLIE----NGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNA--------------- 65 (169)
T ss_dssp HHHH--HHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC---------------
T ss_pred HHHH--HHHcCCHHHHHHHHH----CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhh---------------
Confidence 5777 888888888888876 4566788888999999999999999999999999988776
Q ss_pred hhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHH
Q 027562 117 IRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALH 196 (222)
Q Consensus 117 ~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~ 196 (222)
++..|.||||+|+..|+.+++++|++.|++ ++.+|..|+||||+|+..++.+++++|+++|++++.+|..|+|||+
T Consensus 66 ---~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~ 141 (169)
T 4gpm_A 66 ---KDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLD 141 (169)
T ss_dssp ---CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ---hccCCCCHHHHHHHcCCHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 788999999999999999999999999998 6788999999999999999999999999999999999999999999
Q ss_pred HHHHhccchhHHHHHhcCCcccc
Q 027562 197 AAAMKSYFGKFSYTLSVGISILI 219 (222)
Q Consensus 197 ~a~~~~~~~~~~~Ll~~ga~~~~ 219 (222)
+|+..|+.+++++|+++||+++-
T Consensus 142 ~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 142 LAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp HHHHTTCHHHHHHHHTC------
T ss_pred HHHHcCCHHHHHHHHHCCCCcCC
Confidence 99999999999999999999874
No 26
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.6e-39 Score=248.91 Aligned_cols=189 Identities=20% Similarity=0.265 Sum_probs=160.2
Q ss_pred HHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhh
Q 027562 24 VIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHEN 103 (222)
Q Consensus 24 ~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~ 103 (222)
+.+.+..|..|.||||+ |+..|+.+++++|++ .+..++..+..|.||||+|+..|+.+++++|++.|+..+..
T Consensus 10 ~~~~~~~d~~g~t~L~~--Aa~~g~~~~v~~Ll~----~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~- 82 (364)
T 3ljn_A 10 KLNRIKSDDENMEKIHV--AARKGQTDEVRRLIE----TGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLW- 82 (364)
T ss_dssp ------CCHHHHHHHHH--HHHHTCHHHHHHHHH----TTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCB-
T ss_pred CCCccccCCCCCCHHHH--HHHcCCHHHHHHHHH----cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcccc-
Confidence 34556778899999999 999999999999987 35678889999999999999999999999999999865542
Q ss_pred hHhhhhhhhH---------HHHhhh---------------------------ccccCchHhHHHHhcC--ChHHHHHHHh
Q 027562 104 EELESGIRTA---------RHMIRM---------------------------TNKEKNTALHEAVCHQ--NVDVVEILTK 145 (222)
Q Consensus 104 ~~~~~~~~~~---------~~~~~~---------------------------~~~~~~~~l~~a~~~~--~~~~~~~Ll~ 145 (222)
.+.+++..+ ..++.. .+..|.||||+|+..| +.+++++|++
T Consensus 83 -~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~ 161 (364)
T 3ljn_A 83 -HGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQ 161 (364)
T ss_dssp -TTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHH
T ss_pred -CCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHH
Confidence 122222111 122222 7788999999999999 9999999999
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC-----CccCCCCCccHHHHHHHhccchhHHHHHhcCCccccc
Q 027562 146 EDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTS-----ASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILIS 220 (222)
Q Consensus 146 ~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~-----~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~ 220 (222)
.|++ ++..|..|.||||+|+..++.+++++|+++|++ ++..+..|.||||+|+..|+.+++++|+++|+++++.
T Consensus 162 ~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~ 240 (364)
T 3ljn_A 162 LGAS-PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNME 240 (364)
T ss_dssp HTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCC
T ss_pred cCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCC
Confidence 9999 678899999999999999999999999999999 9999999999999999999999999999999999986
Q ss_pred c
Q 027562 221 F 221 (222)
Q Consensus 221 ~ 221 (222)
+
T Consensus 241 d 241 (364)
T 3ljn_A 241 D 241 (364)
T ss_dssp C
T ss_pred C
Confidence 5
No 27
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=1.6e-39 Score=238.01 Aligned_cols=211 Identities=19% Similarity=0.173 Sum_probs=172.7
Q ss_pred hHHHHHHHcCCchhHHHHHH----HHHHHHhhh----hcCCCchhHHhhh---cccccccHHHHHHHHHhCC-------c
Q 027562 3 PNLFKAAAAGNLEPFKDIAR----EVIKRLLTA----KTKNTILHVNIRS---KESENASTKFVEEILEKCP-------L 64 (222)
Q Consensus 3 ~~l~~A~~~g~~~~v~~ll~----~~~~~~~~~----~~g~~~L~~~~a~---~~~~~~~~~~l~~~~~~~~-------~ 64 (222)
|+||.|++.|+.+.++.|++ .+.+.+..+ ..|.||||+ |+ ..|+.+++++|++...... .
T Consensus 7 ~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~--A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 84 (260)
T 3jxi_A 7 PILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPK--ALLNLSAGRNDTIPILLDIAEKTGNMREFINS 84 (260)
T ss_dssp HHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHH--HHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHH--HHHHhhcCCHHHHHHHHHhcccccchHhhhcc
Confidence 78999999999998777777 666665444 669999999 65 7899999999999866532 2
Q ss_pred cccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHH
Q 027562 65 LLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILT 144 (222)
Q Consensus 65 ~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll 144 (222)
..+..|..|+||||+|+..|+.+++++|+++|++++..+.... .........+..|.||||+|+..|+.+++++|+
T Consensus 85 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~----~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 160 (260)
T 3jxi_A 85 PFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRF----FQPKDEGGYFYFGELPLSLAACTNQPHIVHYLT 160 (260)
T ss_dssp CBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECC----CSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHH
T ss_pred cccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccc----cCcccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 2444566899999999999999999999999998877211000 000000001157999999999999999999999
Q ss_pred h---cCCCCCCCCCCCCCCHHHHHHHcCC---------HHHHHHHHhcCCCC-------ccCCCCCccHHHHHHHhccch
Q 027562 145 K---EDPDYPYSANNDGKTPLYMAADYRS---------SDMVLALLENSTSA-------SHEGPNGKTALHAAAMKSYFG 205 (222)
Q Consensus 145 ~---~~~~~~~~~~~~g~t~l~~a~~~~~---------~~~~~~Ll~~g~~~-------~~~~~~g~t~l~~a~~~~~~~ 205 (222)
+ .|++ ++..|..|+||||+|+..++ .+++++|+++|+++ +.++..|+||||+|+..|+.+
T Consensus 161 ~~~~~ga~-~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~ 239 (260)
T 3jxi_A 161 ENGHKQAD-LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIG 239 (260)
T ss_dssp HCSSCCCC-TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred hccccCCC-CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHH
Confidence 9 8888 67889999999999998877 69999999999998 679999999999999999999
Q ss_pred hHHHHHhcCCccccc
Q 027562 206 KFSYTLSVGISILIS 220 (222)
Q Consensus 206 ~~~~Ll~~ga~~~~~ 220 (222)
++++|+++|+++...
T Consensus 240 ~v~~Ll~~g~~~~~~ 254 (260)
T 3jxi_A 240 IFQHIIRREIADAAA 254 (260)
T ss_dssp HHHHHHHHHHHHHC-
T ss_pred HHHHHHHhCCCcccc
Confidence 999999999987543
No 28
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.2e-39 Score=253.66 Aligned_cols=212 Identities=23% Similarity=0.177 Sum_probs=162.8
Q ss_pred hHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHH
Q 027562 3 PNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAK 82 (222)
Q Consensus 3 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~ 82 (222)
||||.|+..|+.+++++|++.|.+++..+..|.||||+ |+..++.+++++|++ .+..++..+..|.||||.|+.
T Consensus 148 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~--A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~ 221 (437)
T 1n11_A 148 TPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHV--AVHHNNLDIVKLLLP----RGGSPHSPAWNGYTPLHIAAK 221 (437)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHH--HHHTTCHHHHHHHGG----GTCCSCCCCTTCCCHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHH--HHHcCCHHHHHHHHh----CCCCCCCcCCCCCCHHHHHHH
Confidence 57777777777777777777776666666677777777 777777776666655 233445566677777777777
Q ss_pred hCCHHHHHHHHHhhhhhhhhhhHhhhhhhhH---------------HHHhhhccccCchHhHHHHhcCChHHHHHHHhcC
Q 027562 83 FGHSDIVRVLVERAKLLQHENEELESGIRTA---------------RHMIRMTNKEKNTALHEAVCHQNVDVVEILTKED 147 (222)
Q Consensus 83 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~ 147 (222)
.|+.+++++|++.|.+++..+..+.+++... ...++..+..|.||||+|+..|+.+++++|++.|
T Consensus 222 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 301 (437)
T 1n11_A 222 QNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHG 301 (437)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC
Confidence 7777777777777777666554444443332 1123456778889999999999999999999888
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCcccccc
Q 027562 148 PDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILISF 221 (222)
Q Consensus 148 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~ 221 (222)
.+ .+..+..|+||||+|+..++.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++||+++..+
T Consensus 302 ~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~ 374 (437)
T 1n11_A 302 VM-VDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVS 374 (437)
T ss_dssp CC-TTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCC
T ss_pred cc-CCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCC
Confidence 88 56778889999999999999999999999999999999999999999999999999999999999988754
No 29
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.1e-39 Score=237.08 Aligned_cols=213 Identities=20% Similarity=0.202 Sum_probs=186.8
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhh-hhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLT-AKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVA 80 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~-~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a 80 (222)
+|+|+.|+..|+.+++++|++.|.+++.. +..|.||||+ |+..|+.+++++|++ .+..++..+..|.||||+|
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~--A~~~g~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A 79 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHN--AVQMSREDIVELLLR----HGADPVLRKKNGATPFLLA 79 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHH--HHHTTCHHHHHHHHH----TTCCTTCCCTTCCCHHHHH
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHH--HHHcCCHHHHHHHHH----cCCCCcccCCCCCCHHHHH
Confidence 48999999999999999999999888755 7889999999 999999999999987 3566778899999999999
Q ss_pred HHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhH---------HHH------hhhc----------cccCchHhHHHHhcC
Q 027562 81 AKFGHSDIVRVLVERAKLLQHENEELESGIRTA---------RHM------IRMT----------NKEKNTALHEAVCHQ 135 (222)
Q Consensus 81 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~---------~~~------~~~~----------~~~~~~~l~~a~~~~ 135 (222)
+..|+.+++++|+++|++++..+..+.+++... ..+ ++.. +..|.||||.|+..|
T Consensus 80 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 159 (285)
T 1wdy_A 80 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG 159 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcC
Confidence 999999999999999998887766555554433 111 1112 677899999999999
Q ss_pred ChHHHHHHHhc-CCCCCCCCCCCCCCHHHHHHHcCC----HHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHH
Q 027562 136 NVDVVEILTKE-DPDYPYSANNDGKTPLYMAADYRS----SDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYT 210 (222)
Q Consensus 136 ~~~~~~~Ll~~-~~~~~~~~~~~g~t~l~~a~~~~~----~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 210 (222)
+.+++++|++. |.+ .+..+..|.||||+|+..++ .+++++|+++|++++.++..|.||||+|+..++.+++++|
T Consensus 160 ~~~~v~~Ll~~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 238 (285)
T 1wdy_A 160 HVEVLKILLDEMGAD-VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRL 238 (285)
T ss_dssp CHHHHHHHHHTSCCC-TTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHHHhcCCC-CCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 99999999987 777 66889999999999999999 8999999999999999999999999999999999999999
Q ss_pred Hh-cCCcccccc
Q 027562 211 LS-VGISILISF 221 (222)
Q Consensus 211 l~-~ga~~~~~~ 221 (222)
++ +|++++..+
T Consensus 239 l~~~g~~~~~~~ 250 (285)
T 1wdy_A 239 LEQEHIEINDTD 250 (285)
T ss_dssp HHSSSCCTTCCC
T ss_pred HhccCCCccccC
Confidence 99 899998765
No 30
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.4e-40 Score=240.85 Aligned_cols=192 Identities=19% Similarity=0.168 Sum_probs=151.5
Q ss_pred ChHHHHHHHcCCch-hHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHH
Q 027562 2 DPNLFKAAAAGNLE-PFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVA 80 (222)
Q Consensus 2 ~~~l~~A~~~g~~~-~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a 80 (222)
.|||+.|+..+..+ +++.|++.|.+++..+..|.||||+ |+..|+.+++++|++ .+..++..+..|.||++.|
T Consensus 53 ~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~--A~~~g~~~~v~~Ll~----~~a~~~~~~~~g~t~l~~a 126 (269)
T 4b93_B 53 CHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHV--AALHGRADLIPLLLK----HGANAGARNADQAVPLHLA 126 (269)
T ss_dssp ----------------------CCCCTTCCCTTSCCHHHH--HHHTTCTTHHHHHHH----TTCCTTCCCTTCCCHHHHH
T ss_pred CCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHH--HHHcCcHHHHHHHHh----cCCCcCccCCCCCCccccc
Confidence 37899999988765 8899999999999999999999999 999999999999987 4566788899999999999
Q ss_pred HHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCC
Q 027562 81 AKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKT 160 (222)
Q Consensus 81 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 160 (222)
+..++.+++++|++.|++++. +|..|.||||+|+..|+.+++++|++.|++ ++..+..|+|
T Consensus 127 ~~~~~~~~~~~Ll~~g~~~n~------------------~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad-vn~~~~~g~t 187 (269)
T 4b93_B 127 CQQGHFQVVKCLLDSNAKPNK------------------KDLSGNTPLIYACSGGHHELVALLLQHGAS-INASNNKGNT 187 (269)
T ss_dssp HHHTCHHHHHHHHHTTCCSCC------------------CCTTCCCHHHHHHHTTCGGGHHHHHHTTCC-TTCBCTTSCB
T ss_pred cccChHHHHHHHHHCCCCCCC------------------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-CCccccCCCc
Confidence 999999999999999998776 789999999999999999999999999999 6788999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhcc-chhHHHHHhcCCccc
Q 027562 161 PLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSY-FGKFSYTLSVGISIL 218 (222)
Q Consensus 161 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~-~~~~~~Ll~~ga~~~ 218 (222)
|||+|+..++.+++++|+++|++++.+|..|+||||+|++++. .++++.|.+.+++++
T Consensus 188 ~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~~~~~ 246 (269)
T 4b93_B 188 ALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPSCVASLD 246 (269)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC---------
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhchhhh
Confidence 9999999999999999999999999999999999999998876 466777777776653
No 31
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=4.3e-39 Score=247.12 Aligned_cols=209 Identities=16% Similarity=0.131 Sum_probs=166.3
Q ss_pred ChHHHHHHHcCCchhHHHHH--------HHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCC
Q 027562 2 DPNLFKAAAAGNLEPFKDIA--------REVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKG 73 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll--------~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 73 (222)
.||||+|+..|+.+++++|+ +.|.+++..+..|.||||+ |+..|+.+++++|++ .+..++..+..|
T Consensus 126 ~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~--A~~~g~~~iv~~Ll~----~ga~~~~~~~~g 199 (373)
T 2fo1_E 126 RTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLML--AVLARRRRLVAYLMK----AGADPTIYNKSE 199 (373)
T ss_dssp CCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHH--HHHHTCHHHHHHHHH----TTCCSCCCCTTC
T ss_pred CCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHH--HHHcChHHHHHHHHH----CCCCCcccCCCC
Confidence 48999999999999999887 5567777888899999999 999999999999887 456678889999
Q ss_pred ChHHHHHHHhCCHHHHHHHHHhh---hhhhhhhhHhhhhhhhH------------HHH------hh--------hccccC
Q 027562 74 ETPLHVAAKFGHSDIVRVLVERA---KLLQHENEELESGIRTA------------RHM------IR--------MTNKEK 124 (222)
Q Consensus 74 ~t~L~~a~~~~~~~~~~~Ll~~~---~~~~~~~~~~~~~~~~~------------~~~------~~--------~~~~~~ 124 (222)
.||||+|+..|+.+++++|++.+ .+++..+..+.+++..+ ..+ ++ ..+..|
T Consensus 200 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g 279 (373)
T 2fo1_E 200 RSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKG 279 (373)
T ss_dssp CCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCC
T ss_pred CCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccC
Confidence 99999999999999999999987 55555444333333221 111 11 134578
Q ss_pred chHhHHHHhcCChHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhcc
Q 027562 125 NTALHEAVCHQNVDVVEILTKED-PDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSY 203 (222)
Q Consensus 125 ~~~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 203 (222)
.||||+|+..|+.+++++|++.+ .+ .+..|..|+||||+|+..++.+++++|+++|++++.+|..|.|||++|+..|+
T Consensus 280 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~-~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~ 358 (373)
T 2fo1_E 280 RTALHYAAQVSNMPIVKYLVGEKGSN-KDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNH 358 (373)
T ss_dssp CCTHHHHHSSCCHHHHHHHHHHSCCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTC
T ss_pred CCHHHHHHHhCCHHHHHHHHHhcCCC-ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCC
Confidence 88888888888888888888776 55 66778888888888888888888888888888888888888888888888888
Q ss_pred chhHHHHHhcCCcc
Q 027562 204 FGKFSYTLSVGISI 217 (222)
Q Consensus 204 ~~~~~~Ll~~ga~~ 217 (222)
.+++++|+++|++.
T Consensus 359 ~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 359 HNIVDIFDRCRPER 372 (373)
T ss_dssp HHHHHHHHTTC---
T ss_pred HHHHHHHHhcCccc
Confidence 88888888888764
No 32
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.4e-38 Score=249.08 Aligned_cols=213 Identities=25% Similarity=0.262 Sum_probs=185.6
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAA 81 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~ 81 (222)
.||||.|+..|+.++|++|++.|.+++..+..|.||||+ |+..|+.+++++|++. +..++..+..|.||||+|+
T Consensus 15 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~--A~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~ 88 (437)
T 1n11_A 15 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHM--AARAGHTEVAKYLLQN----KAKVNAKAKDDQTPLHCAA 88 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHH--HHHHTCHHHHHHHHHH----TCCSSCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHH--HHHcCCHHHHHHHHhC----CCCCCCCCCCCCCHHHHHH
Confidence 489999999999999999999999988888999999999 9999999999999884 4567888999999999999
Q ss_pred HhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhH---------HH------HhhhccccCchHhHHHHhcCChHHHHHHHhc
Q 027562 82 KFGHSDIVRVLVERAKLLQHENEELESGIRTA---------RH------MIRMTNKEKNTALHEAVCHQNVDVVEILTKE 146 (222)
Q Consensus 82 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~---------~~------~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~ 146 (222)
..|+.+++++|+++|++++..+..+.+++..+ .. .....+..|.||||+|+..|+.+++++|++.
T Consensus 89 ~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 168 (437)
T 1n11_A 89 RIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLER 168 (437)
T ss_dssp HHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 99999999999999998887666555554433 11 1233567788999999999999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCcccccc
Q 027562 147 DPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILISF 221 (222)
Q Consensus 147 ~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~ 221 (222)
|.+ ++..+..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++..+
T Consensus 169 g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~ 242 (437)
T 1n11_A 169 DAH-PNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAES 242 (437)
T ss_dssp TCC-TTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 988 66778889999999999999999999999999999988899999999999999999999999999988654
No 33
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.1e-38 Score=241.80 Aligned_cols=211 Identities=15% Similarity=0.111 Sum_probs=171.3
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHH---------------------------------hhhhcCCCchhHHhhhcccc
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRL---------------------------------LTAKTKNTILHVNIRSKESE 48 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~---------------------------------~~~~~g~~~L~~~~a~~~~~ 48 (222)
.||||+|+..|+.++|++|++.|.+++ ..+..|.||||+ |+..|+
T Consensus 60 ~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~--A~~~~~ 137 (337)
T 4g8k_A 60 WTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFME--AAVYGK 137 (337)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHH--HHHTTC
T ss_pred cCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHH--HHHcCc
Confidence 489999999999999999999775432 356788999999 999999
Q ss_pred cccHHHHHHHHHhC------CccccccccCCChHHHHHHHhCCHHHHHHHHHh-hhhhhhhhhHhhhhhhh---------
Q 027562 49 NASTKFVEEILEKC------PLLLLQVNAKGETPLHVAAKFGHSDIVRVLVER-AKLLQHENEELESGIRT--------- 112 (222)
Q Consensus 49 ~~~~~~l~~~~~~~------~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~~~~--------- 112 (222)
.++++++++..... .......+..|.||||+|+..|+.+++++|+++ |++++..+..+.+++..
T Consensus 138 ~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~ 217 (337)
T 4g8k_A 138 VKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSD 217 (337)
T ss_dssp HHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTT
T ss_pred HHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCccc
Confidence 99999988753221 112234466799999999999999999999964 78877665443333221
Q ss_pred ----------HHHHhhhccccCchHhHHHHhcCChHHHHHHHhc-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Q 027562 113 ----------ARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKE-DPDYPYSANNDGKTPLYMAADYRSSDMVLALLENS 181 (222)
Q Consensus 113 ----------~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 181 (222)
....++.++..|.||||+|+..|+.++++.|++. |.+ .+..|..|+||||+|+..++.+++++|+++|
T Consensus 218 ~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~-vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G 296 (337)
T 4g8k_A 218 VEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE-INDTDSDGKTALLLAVELKLKKIAELLCKRG 296 (337)
T ss_dssp HHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHTTS
T ss_pred HHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCc-ccCcCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 1223566889999999999999999999999986 566 7789999999999999999999999999999
Q ss_pred CCCccCCCCCccHHHHHHHhccchhHHHHHhcCCccccc
Q 027562 182 TSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILIS 220 (222)
Q Consensus 182 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~ 220 (222)
++++.+ +|||+|+..++.+++++||++||+||+.
T Consensus 297 Ad~n~~-----~~L~~A~~~~~~~iv~~Ll~~GA~~d~~ 330 (337)
T 4g8k_A 297 ASTDCG-----DLVMTARRNYDHSLVKVLLSHGAKEDFH 330 (337)
T ss_dssp CSSTTC-----CHHHHHHHTTCHHHHHHHHHTTCCC---
T ss_pred CCCCCC-----CHHHHHHHcCCHHHHHHHHHCcCCCCCC
Confidence 998764 5999999999999999999999999974
No 34
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=8.4e-39 Score=218.87 Aligned_cols=161 Identities=24% Similarity=0.360 Sum_probs=146.0
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAA 81 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~ 81 (222)
+++|+.||++|+.++|++|++.|.+++..+..|.||||+ |+..++.++++++++ .+.+++.+|..|+||||+|+
T Consensus 5 g~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~--a~~~~~~~~~~~ll~----~gad~~~~d~~g~TpLh~A~ 78 (169)
T 4gpm_A 5 GKRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHH--AAENGHKEVVKLLIS----KGADVNAKDSDGRTPLHHAA 78 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH--HHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH--HHHcCCHHHHHHHHh----cccchhhhccCCCCHHHHHH
Confidence 468999999999999999999999999999999999999 999999999988877 46678899999999999999
Q ss_pred HhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCH
Q 027562 82 KFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTP 161 (222)
Q Consensus 82 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 161 (222)
..|+.+++++|+++|++++. ++..|+||||+|+..|+.+++++|++.|++ ++..|..|+||
T Consensus 79 ~~g~~~~v~~Ll~~gadvn~------------------~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~Tp 139 (169)
T 4gpm_A 79 ENGHKEVVKLLISKGADVNA------------------KDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNTSDSDGRTP 139 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred HcCCHHHHHHHHHCcCCCCC------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCH
Confidence 99999999999999998876 789999999999999999999999999999 67889999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCccC
Q 027562 162 LYMAADYRSSDMVLALLENSTSASHE 187 (222)
Q Consensus 162 l~~a~~~~~~~~~~~Ll~~g~~~~~~ 187 (222)
||+|+..++.+++++|+++|++++..
T Consensus 140 L~~A~~~g~~~iv~~Ll~~GA~ie~~ 165 (169)
T 4gpm_A 140 LDLAREHGNEEVVKLLEKQGGWLEHH 165 (169)
T ss_dssp HHHHHHTTCHHHHHHHHTC-------
T ss_pred HHHHHHcCCHHHHHHHHHCCCCcCCC
Confidence 99999999999999999999998753
No 35
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.9e-38 Score=227.16 Aligned_cols=212 Identities=18% Similarity=0.126 Sum_probs=159.5
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAA 81 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~ 81 (222)
.|+|+.|+..|+.+++++|++.|.+++..+..|.||||+ |+..|+.+++++|++. +.......+..|.||||.|+
T Consensus 10 ~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~--A~~~~~~~~v~~Ll~~---~~~~~~~~~~~~~t~L~~A~ 84 (240)
T 3eu9_A 10 TWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHW--AAINNRIDLVKYYISK---GAIVDQLGGDLNSTPLHWAT 84 (240)
T ss_dssp GCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH--HHHTTCHHHHHHHHHT---TCCTTCCBTTTTBCHHHHHH
T ss_pred chHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHH--HHHhCCHHHHHHHHHc---CCcchhhcCCcCCChhHHHH
Confidence 368999999999999999999998888888899999999 9999999999988873 32233344556899999999
Q ss_pred HhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhH---------------HHHhhhccccCchHhHHHHhcCC-hHHHHHHHh
Q 027562 82 KFGHSDIVRVLVERAKLLQHENEELESGIRTA---------------RHMIRMTNKEKNTALHEAVCHQN-VDVVEILTK 145 (222)
Q Consensus 82 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~l~~a~~~~~-~~~~~~Ll~ 145 (222)
..|+.+++++|++.|++++..+..+.+++..+ ...++..+..|.||+|.|+..+. .+++++|++
T Consensus 85 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~ 164 (240)
T 3eu9_A 85 RQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLT 164 (240)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHh
Confidence 99999999999999888776544433333222 11233456677788888875544 677777777
Q ss_pred cCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCcccc
Q 027562 146 EDPDYPYSANN-DGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILI 219 (222)
Q Consensus 146 ~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~ 219 (222)
.|.+. +..+. .|.||||+|+..++.+++++|+++|++++.++..|.||+++|+..++.+++++|+++|++..+
T Consensus 165 ~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~ 238 (240)
T 3eu9_A 165 FNVSV-NLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGY 238 (240)
T ss_dssp TTCCT-TCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC-----
T ss_pred cCCCc-chhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhccCc
Confidence 77773 34443 778888888888888888888888888888888888888888888888888888888877654
No 36
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=3e-38 Score=226.20 Aligned_cols=186 Identities=20% Similarity=0.173 Sum_probs=168.5
Q ss_pred cCCchhHHHHHHHHHHHHh-hhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHH
Q 027562 11 AGNLEPFKDIAREVIKRLL-TAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIV 89 (222)
Q Consensus 11 ~g~~~~v~~ll~~~~~~~~-~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~ 89 (222)
.|+.+++++|++.|.+.+. .+..|.||||+ |+..|+.+++++|++ .+..++..+..|.||||.|+..|+.+++
T Consensus 1 gg~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~--A~~~g~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v 74 (223)
T 2f8y_A 1 GDAPAVISDFIYQGASLHNQTDRTGETALHL--AARYSRSDAAKRLLE----ASADANIQDNMGRTPLHAAVSADAQGVF 74 (223)
T ss_dssp ----CCEETTEETTCCTTCCCTTTCCCHHHH--HHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCcHHHHHHHHHcCCCcccccCCCCCchHHH--HHHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 3788999999999998874 48899999999 999999999999987 3566788899999999999999999999
Q ss_pred HHHHHhhh-hhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHc
Q 027562 90 RVLVERAK-LLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADY 168 (222)
Q Consensus 90 ~~Ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~ 168 (222)
++|++.+. .++. .+..|.||||+|+..++.+++++|++.|++ .+..+..|+||||+|+..
T Consensus 75 ~~Ll~~~~~~~~~------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~ 135 (223)
T 2f8y_A 75 QILIRNRATDLDA------------------RMHDGTTPLILAARLAVEGMLEDLINSHAD-VNAVDDLGKSALHWAAAV 135 (223)
T ss_dssp HHHHHBTTSCTTC------------------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHT
T ss_pred HHHHHcCCCCccc------------------CCCCCCcHHHHHHHhCcHHHHHHHHHcCCC-CcCcCCCCCcHHHHHHHc
Confidence 99999876 4443 788999999999999999999999999999 668899999999999999
Q ss_pred CCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCcccccc
Q 027562 169 RSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILISF 221 (222)
Q Consensus 169 ~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~ 221 (222)
++.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++..+
T Consensus 136 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 188 (223)
T 2f8y_A 136 NNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITD 188 (223)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccc
Confidence 99999999999999999999999999999999999999999999999998764
No 37
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=230.39 Aligned_cols=192 Identities=17% Similarity=0.128 Sum_probs=153.5
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHH-----------HHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccc
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIK-----------RLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVN 70 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~-----------~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~ 70 (222)
+|+||+|+..|+.+.+..++..+.. .+..+..|.||||+ |+..|+.+++++|++ .+..++..+
T Consensus 16 ~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~--Aa~~g~~~~v~~Ll~----~g~~~~~~~ 89 (285)
T 3d9h_A 16 PRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHE--AAIHGHQLSLRNLIS----QGWAVNIIT 89 (285)
T ss_dssp --------------------------CCSEECCCCTTCSSSCCSCCHHHH--HHHTTCHHHHHHHHH----TTCCSCEEC
T ss_pred HHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHH--HHHcCCHHHHHHHHH----CCCCCCCcC
Confidence 5899999999999888888776543 12567889999999 999999999999887 356688899
Q ss_pred cCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCC
Q 027562 71 AKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDY 150 (222)
Q Consensus 71 ~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~ 150 (222)
..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++.|++.
T Consensus 90 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 151 (285)
T 3d9h_A 90 ADHVSPLHEACLGGHLSCVKILLKHGAQVNG------------------VTADWHTPLFNACVSGSWDCVNLLLQHGASV 151 (285)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCSSC------------------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred CCCCCHHHHHHHCCcHHHHHHHHHCCCCCCC------------------CCCCCCCHHHHHHHcCHHHHHHHHHHCCCCC
Confidence 9999999999999999999999999988776 7899999999999999999999999999984
Q ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCcccc
Q 027562 151 PYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILI 219 (222)
Q Consensus 151 ~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~ 219 (222)
+. +..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++.
T Consensus 152 -~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 218 (285)
T 3d9h_A 152 -QP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ 218 (285)
T ss_dssp -SC-SCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred -CC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC
Confidence 33 44599999999999999999999999999999999999999999999999999999999999985
No 38
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=3.9e-38 Score=241.77 Aligned_cols=179 Identities=12% Similarity=0.114 Sum_probs=151.1
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAA 81 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~ 81 (222)
.||||+|+..|+.++|++|++.|.+++..+..|.||||+ |+..|+.+++++|++.... ...++..+..|.||||+|+
T Consensus 167 ~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~--A~~~g~~~~v~~Ll~~~~~-~~~~~~~d~~g~t~L~~A~ 243 (373)
T 2fo1_E 167 NTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQ--AAANRDFGMMVYMLNSTKL-KGDIEELDRNGMTALMIVA 243 (373)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHH--HHHTTCHHHHHHHTTSHHH-HHTTSCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHH--HHHCCCHHHHHHHHhcCcc-ccChhhcCCCCCCHHHHHH
Confidence 589999999999999999999999999899999999999 9999999999999874311 1356778999999999999
Q ss_pred HhC---CHHHHHHHHHhhhhhhhh--------hhHhhhhhhhH----------------HHHhhhccccCchHhHHHHhc
Q 027562 82 KFG---HSDIVRVLVERAKLLQHE--------NEELESGIRTA----------------RHMIRMTNKEKNTALHEAVCH 134 (222)
Q Consensus 82 ~~~---~~~~~~~Ll~~~~~~~~~--------~~~~~~~~~~~----------------~~~~~~~~~~~~~~l~~a~~~ 134 (222)
..+ +.+++++|++.|++++.. +..+.+++..+ ...++..+..|.||||+|+..
T Consensus 244 ~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~ 323 (373)
T 2fo1_E 244 HNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQE 323 (373)
T ss_dssp HSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHH
T ss_pred HhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHc
Confidence 998 899999999999888752 22222333222 134556788999999999999
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCC
Q 027562 135 QNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSA 184 (222)
Q Consensus 135 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~ 184 (222)
|+.+++++|++.|++ .+..|..|+|||++|+..++.+++++|++++++.
T Consensus 324 g~~~iv~~Ll~~gad-~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 324 GRIEVVMYLIQQGAS-VEAVDATDHTARQLAQANNHHNIVDIFDRCRPER 372 (373)
T ss_dssp TCHHHHHHHHHTTCC-SSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC---
T ss_pred CCHHHHHHHHHcCCC-ccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 999999999999999 6788999999999999999999999999998763
No 39
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.7e-37 Score=236.16 Aligned_cols=196 Identities=19% Similarity=0.226 Sum_probs=177.0
Q ss_pred ChHHHHHHHcCCchhHHHHHHH-HHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIARE-VIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVA 80 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a 80 (222)
.++|+.|+..|+.+.+++++.. +.+.+..+..|.||||+ |+..|+.+++++|++ .+..++..+..|.||||+|
T Consensus 25 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~--A~~~g~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A 98 (351)
T 3utm_A 25 KDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHL--AAGYNRVRIVQLLLQ----HGADVHAKDKGGLVPLHNA 98 (351)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHH--HHHTTCHHHHHHHHH----TTCCTTCCCTTCCCHHHHH
T ss_pred chhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHH--HHHcCCHHHHHHHHH----cCCCCCccCCCCCcHHHHH
Confidence 3789999999999999999985 67777888899999999 999999999999988 4567888999999999999
Q ss_pred HHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCC--------
Q 027562 81 AKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPY-------- 152 (222)
Q Consensus 81 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~-------- 152 (222)
+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.|++...
T Consensus 99 ~~~g~~~iv~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~ 160 (351)
T 3utm_A 99 CSYGHYEVTELLLKHGACVNA------------------MDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSA 160 (351)
T ss_dssp HHTTCHHHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred HHCCCHHHHHHHHHCCCCCCC------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcc
Confidence 999999999999999988776 788999999999999999999999999887321
Q ss_pred ---------------------------------------------CCCCCCCCHHHHHHHc---CCHHHHHHHHhcCCCC
Q 027562 153 ---------------------------------------------SANNDGKTPLYMAADY---RSSDMVLALLENSTSA 184 (222)
Q Consensus 153 ---------------------------------------------~~~~~g~t~l~~a~~~---~~~~~~~~Ll~~g~~~ 184 (222)
..+..|.||||+|+.. +..+++++|++.|+++
T Consensus 161 l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~ 240 (351)
T 3utm_A 161 VDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANV 240 (351)
T ss_dssp HHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCT
T ss_pred hHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCc
Confidence 1235678999999998 5589999999999999
Q ss_pred ccCCCCCccHHHHHHHhccchhHHHHHhcCCcccccc
Q 027562 185 SHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILISF 221 (222)
Q Consensus 185 ~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~ 221 (222)
+.++..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 241 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d 277 (351)
T 3utm_A 241 NEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALD 277 (351)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 9999999999999999999999999999999999765
No 40
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=7.6e-38 Score=229.24 Aligned_cols=188 Identities=16% Similarity=0.125 Sum_probs=170.0
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAA 81 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~ 81 (222)
.||||.|+..|+.+++++|++.|.+++..+..|.||||+ |+..|+.+++++|++. +..++. +..|.||||.|+
T Consensus 37 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~--A~~~~~~~~v~~Ll~~----g~~~~~-~~~g~t~L~~A~ 109 (261)
T 2xai_A 37 VSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFN--ACVSGSWDCVNLLLQH----GASVQP-ESDLASPIHEAA 109 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH--HHHHTCHHHHHHHHHT----TCCSSC-SCTTCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHH--HHHcCCHHHHHHHHHC----CCCCCC-CCCCCCHHHHHH
Confidence 489999999999999999999999999899999999999 9999999999999884 333333 456999999999
Q ss_pred HhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCH
Q 027562 82 KFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTP 161 (222)
Q Consensus 82 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 161 (222)
..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++.|+++. .+..|.||
T Consensus 110 ~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~ 169 (261)
T 2xai_A 110 RRGHVECVNSLIAYGGNIDH------------------KISHLGTPLYLACENQQRACVKKLLESGADVN--QGKGQDSP 169 (261)
T ss_dssp HTTCHHHHHHHHHTTCCTTC------------------CBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT--CCBTTBCH
T ss_pred HcCcHHHHHHHHHcCCCCCc------------------CCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC--CCCCCCCh
Confidence 99999999999999988776 78899999999999999999999999999944 38889999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCccc
Q 027562 162 LYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISIL 218 (222)
Q Consensus 162 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~ 218 (222)
||+|+..++.+++++|+++|++++.+|..|+||+++|+.. .+++++|+++++.+.
T Consensus 170 Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~--~~~~~~ll~~~~~~~ 224 (261)
T 2xai_A 170 LHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPE--SPLAQLFLEREGPPS 224 (261)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT--CTHHHHHHHC-CCCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhcccc--ccHHHHHHhccCCcc
Confidence 9999999999999999999999999999999999999954 468999999988654
No 41
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.3e-37 Score=224.78 Aligned_cols=187 Identities=23% Similarity=0.277 Sum_probs=172.6
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAA 81 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~ 81 (222)
.||||.|+..|+.+++++|++.|.+++..+..|.||||+ |+..|+.+++++|++. ++..++..+..|.||||.|+
T Consensus 45 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~--A~~~~~~~~~~~Ll~~---~~~~~~~~~~~g~t~L~~A~ 119 (237)
T 3b7b_A 45 RTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHL--AAKKGHYEVVQYLLSN---GQMDVNCQDDGGWTPMIWAT 119 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHH--HHHTTCHHHHHHHHTT---TCCCTTCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHH--HHHcCCHHHHHHHHhC---CCCCcccCCCCCCCHHHHHH
Confidence 479999999999999999999999888888999999999 9999999999888773 44667888999999999999
Q ss_pred HhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCH
Q 027562 82 KFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTP 161 (222)
Q Consensus 82 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 161 (222)
..|+.+++++|++.|++++. .+..|.||+|+|+..|+.+++++|++.|++ ++..|..|.||
T Consensus 120 ~~~~~~~~~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~ 180 (237)
T 3b7b_A 120 EYKHVDLVKLLLSKGSDINI------------------RDNEENICLHWAAFSGCVDIAEILLAAKCD-LHAVNIHGDSP 180 (237)
T ss_dssp HTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHHCCHHHHHHHHTTTCC-TTCCCTTCCCH
T ss_pred HcCCHHHHHHHHHCCCCCCc------------------cCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCcCCCCCCH
Confidence 99999999999999988766 788999999999999999999999999999 66889999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHh
Q 027562 162 LYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLS 212 (222)
Q Consensus 162 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 212 (222)
||+|+..++.+++++|+++|++++.+|..|.|||++|+..++.+.+..|++
T Consensus 181 L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 181 LHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred HHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999876666554
No 42
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.2e-37 Score=222.24 Aligned_cols=178 Identities=21% Similarity=0.210 Sum_probs=149.5
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHH-hhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRL-LTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVA 80 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~-~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a 80 (222)
.||||.|+..|+.+++++|++.+.+.+ ..+..|.||||+ |+..|+.+++++|++ .+..++..+..|.||||.|
T Consensus 43 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~--A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~l~~A 116 (240)
T 3eu9_A 43 VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHW--ATRQGHLSMVVQLMK----YGADPSLIDGEGCSCIHLA 116 (240)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHH--HHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHH
T ss_pred CCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHH--HHHcCCHHHHHHHHH----cCCCCcccCCCCCCHHHHH
Confidence 479999999999999999999998876 444569999999 999999999999887 3556778899999999999
Q ss_pred HHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHH----------------HHhhhccc-cCchHhHHHHhcCChHHHHHH
Q 027562 81 AKFGHSDIVRVLVERAKLLQHENEELESGIRTAR----------------HMIRMTNK-EKNTALHEAVCHQNVDVVEIL 143 (222)
Q Consensus 81 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~-~~~~~l~~a~~~~~~~~~~~L 143 (222)
+..|+.+++++|++.|++++..+..+.+++.... ..++..+. .|.||||+|+..|+.+++++|
T Consensus 117 ~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 196 (240)
T 3eu9_A 117 AQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLL 196 (240)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHH
Confidence 9999999999999999988877665555544331 12233454 789999999999999999999
Q ss_pred HhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCcc
Q 027562 144 TKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASH 186 (222)
Q Consensus 144 l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~ 186 (222)
++.|++ ++..+..|.||+++|+..++.+++++|++++++...
T Consensus 197 l~~g~~-~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~ 238 (240)
T 3eu9_A 197 LEAGAN-VDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGY 238 (240)
T ss_dssp HHHTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC-----
T ss_pred HHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhccCc
Confidence 999999 678899999999999999999999999999887643
No 43
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=4.6e-37 Score=220.68 Aligned_cols=186 Identities=16% Similarity=0.111 Sum_probs=167.3
Q ss_pred ChHHHHHHHcCCchhHHHHHHHH--HHHHh-hhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREV--IKRLL-TAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLH 78 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~--~~~~~-~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~ 78 (222)
.||||.|+..|+.+++++|++.| .+.+. .+..|.||||+ |+..|+.+++++|++.. ....++..+..|.||||
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~--A~~~~~~~~~~~Ll~~g--~~~~~~~~~~~g~t~L~ 112 (228)
T 2dzn_A 37 RIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHI--ACSVGNLEVVKSLYDRP--LKPDLNKITNQGVTCLH 112 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHH--HHHHCCHHHHHHHHSSS--SCCCTTCCCTTCCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHH--HHHcCCHHHHHHHHhCC--CCcccccCCcCCCCHHH
Confidence 58999999999999999999998 55555 77899999999 99999999998887731 12567888999999999
Q ss_pred HHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcC-CCCCCCCCCC
Q 027562 79 VAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKED-PDYPYSANND 157 (222)
Q Consensus 79 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~ 157 (222)
.|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++.| .+ .+..|..
T Consensus 113 ~A~~~~~~~~~~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~d~~ 173 (228)
T 2dzn_A 113 LAVGKKWFEVSQFLIENGASVRI------------------KDKFNQIPLHRAASVGSLKLIELLCGLGKSA-VNWQDKQ 173 (228)
T ss_dssp HHHHTTCHHHHHHHHHTTCCSCC------------------CCTTSCCHHHHHHHTTCHHHHHHHHTTTCCC-SCCCCTT
T ss_pred HHHHcCCHhHHHHHHHcCCCccc------------------cCCCCCCHHHHHHHcCCHHHHHHHHhcCccc-ccCcCCC
Confidence 99999999999999999988776 7889999999999999999999999999 55 7788999
Q ss_pred CCCHHHHHHHcCCHHHHHHHH-hcCCCCccCCCCCccHHHHHHHhccchhHHHHHhc
Q 027562 158 GKTPLYMAADYRSSDMVLALL-ENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSV 213 (222)
Q Consensus 158 g~t~l~~a~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 213 (222)
|+||||+|+..++.+++++|+ ++|++++.+|..|.||+++|+. .++.++|+++
T Consensus 174 g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~---~~~~~~l~~~ 227 (228)
T 2dzn_A 174 GWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKKFFLNN 227 (228)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSS---TTHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHH---HHHHHHHHhc
Confidence 999999999999999999999 8999999999999999999974 4778888764
No 44
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=7.2e-37 Score=225.65 Aligned_cols=189 Identities=21% Similarity=0.195 Sum_probs=173.4
Q ss_pred hHHHHHHHcCCchhHHHHHHHHHH--HHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHH
Q 027562 3 PNLFKAAAAGNLEPFKDIAREVIK--RLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVA 80 (222)
Q Consensus 3 ~~l~~A~~~g~~~~v~~ll~~~~~--~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a 80 (222)
+++|.|+..|+++.++.+++.+.+ ++..|..|.||||+ |+..|+.+++++|++. +...++..+..|+||||+|
T Consensus 78 ~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~--A~~~g~~~~v~~Ll~~---g~~~~~~~~~~g~tpL~~a 152 (276)
T 4hbd_A 78 SDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHY--SVSHANFPVVQQLLDS---GVCKVDKQNRAGYSPIMLT 152 (276)
T ss_dssp TTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHH--HHHTTCHHHHHHHHHT---SCCCTTCCCTTSCCHHHHG
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHH--HHHCCCHHHHHHHHHC---CCCcCCCCCCCCCCHHHHH
Confidence 567899999999999999998777 66889999999999 9999999999999873 3347888999999999999
Q ss_pred H-----HhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCC
Q 027562 81 A-----KFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSAN 155 (222)
Q Consensus 81 ~-----~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 155 (222)
+ ..++.+++++|++.|...+. .+..|.||||+|+..|+.+++++|++.|++ ++..|
T Consensus 153 ~~~~~~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad-~n~~d 213 (276)
T 4hbd_A 153 ALATLKTQDDIETVLQLFRLGNINAK------------------ASQAGQTALMLAVSHGRVDVVKALLACEAD-VNVQD 213 (276)
T ss_dssp GGCCCCSHHHHHHHHHHHHHSCTTCC------------------CTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCC
T ss_pred HHHHhhhhhhHHHHHHHHHcCCCccc------------------cCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCC
Confidence 9 66889999999999976655 678899999999999999999999999999 67889
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCC
Q 027562 156 NDGKTPLYMAADYRSSDMVLALLE-NSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGI 215 (222)
Q Consensus 156 ~~g~t~l~~a~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga 215 (222)
..|+||||+|+..++.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|++++.
T Consensus 214 ~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 214 DDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 999999999999999999999999 899999999999999999999999999999999863
No 45
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=5.3e-37 Score=226.90 Aligned_cols=181 Identities=23% Similarity=0.255 Sum_probs=150.8
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHh--------------------
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEK-------------------- 61 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~-------------------- 61 (222)
.||||+|+..|+.+++++|++.|.+++..+..|.||||+ |+..|+.+++++|++....
T Consensus 46 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~--A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (282)
T 1oy3_D 46 QTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHL--ACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDT 123 (282)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHH--HTTTTCHHHHHHHSSSCCSSCCCC---------------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH--HHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcch
Confidence 489999999999999999999999999889999999999 9999999999998763211
Q ss_pred -----------------------CCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhh
Q 027562 62 -----------------------CPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIR 118 (222)
Q Consensus 62 -----------------------~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (222)
.+..++..+..|.||||+|+..|+.+++++|+++|++++.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~----------------- 186 (282)
T 1oy3_D 124 SHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNK----------------- 186 (282)
T ss_dssp --------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-----------------
T ss_pred hcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCC-----------------
Confidence 1123667788999999999999999999999999998776
Q ss_pred hcc-ccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHH
Q 027562 119 MTN-KEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHA 197 (222)
Q Consensus 119 ~~~-~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~ 197 (222)
.+ ..|.||||+|+..|+.+++++|++.|++ ++.+|..|+||||+|+..++.+++++|+++|++++.++..|.||+++
T Consensus 187 -~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~ 264 (282)
T 1oy3_D 187 -PEPTCGRTPLHLAVEAQAASVLELLLKAGAD-PTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSS 264 (282)
T ss_dssp -CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC---------
T ss_pred -CCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-CcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccc
Confidence 45 4599999999999999999999999999 67899999999999999999999999999999999999999999999
Q ss_pred HHHhcc
Q 027562 198 AAMKSY 203 (222)
Q Consensus 198 a~~~~~ 203 (222)
|.....
T Consensus 265 a~~~~~ 270 (282)
T 1oy3_D 265 SGSDSD 270 (282)
T ss_dssp ------
T ss_pred cCCccc
Confidence 987654
No 46
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=2.9e-35 Score=206.09 Aligned_cols=163 Identities=21% Similarity=0.166 Sum_probs=152.5
Q ss_pred HHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHh
Q 027562 27 RLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEEL 106 (222)
Q Consensus 27 ~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 106 (222)
.+..+..|.||||+ |+..|+.+++++|++.. ..++..+..|.||||+|+..|+.+++++|++.|++++.
T Consensus 28 ~n~~d~~g~t~L~~--A~~~g~~~~v~~Ll~~~----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~----- 96 (192)
T 2rfm_A 28 RNYRDSYNRTPLMV--ACMLGMENAIDKLVENF----DKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNT----- 96 (192)
T ss_dssp HTCCCTTCCCHHHH--HHHHTCGGGHHHHHHHH----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-----
T ss_pred HhCcCCCCCCHHHH--HHHcCCHHHHHHHHHhc----cccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCC-----
Confidence 44678899999999 99999999999999853 35677889999999999999999999999999988766
Q ss_pred hhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCcc
Q 027562 107 ESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASH 186 (222)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~ 186 (222)
.+..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++.+++++|+++|++++.
T Consensus 97 -------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 162 (192)
T 2rfm_A 97 -------------KDFSGKTPLMWSIIFGYSEMSYFLLEHGAN-VNDRNLEGETPLIVASKYGRSEIVKKLLELGADISA 162 (192)
T ss_dssp -------------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred -------------CCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 788999999999999999999999999999 668899999999999999999999999999999999
Q ss_pred CCCCCccHHHHHHHhccchhHHHHHhcC
Q 027562 187 EGPNGKTALHAAAMKSYFGKFSYTLSVG 214 (222)
Q Consensus 187 ~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 214 (222)
++..|.||+++|+..++.+++++|+++|
T Consensus 163 ~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 163 RDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp BCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 9999999999999999999999999987
No 47
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=5.1e-37 Score=227.48 Aligned_cols=188 Identities=14% Similarity=0.081 Sum_probs=171.0
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCC-ChHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKG-ETPLHVA 80 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~t~L~~a 80 (222)
.||||.|+..|+.+++++|++.|.+++..+..|.||||+ |+..|+.+++++|++. +..++..+..| .||||.|
T Consensus 63 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~--A~~~g~~~~v~~Ll~~----ga~~~~~~~~g~~t~L~~A 136 (285)
T 3kea_A 63 EFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYY--AVDSGNMQTVKLFVKK----NWRLMFYGKTGWKTSFYHA 136 (285)
T ss_dssp CCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHH--HHHTTCHHHHHHHHHH----CGGGGGCSSSGGGSHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHH--HHHcCCHHHHHHHHhc----CCCCCccCCCCCCCHHHHH
Confidence 489999999999999999999999999899999999999 9999999999999885 55678889999 7999999
Q ss_pred HHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCC
Q 027562 81 AKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKT 160 (222)
Q Consensus 81 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 160 (222)
+..|+.+++++|+++|+.... ...|.||||+|+..|+.+++++|++.|++ ++..+..|+|
T Consensus 137 ~~~~~~~~v~~Ll~~g~~~~~-------------------~~~g~t~L~~A~~~g~~~~v~~Ll~~gad-~n~~~~~g~t 196 (285)
T 3kea_A 137 VMLNDVSIVSYFLSEIPSTFD-------------------LAILLSCIHITIKNGHVDMMILLLDYMTS-TNTNNSLLFI 196 (285)
T ss_dssp HHTTCHHHHHHHHTTSCTTCC-------------------CSTHHHHHHHHHHTTCHHHHHHHHHHHHH-TCTTCCCBCC
T ss_pred HHcCCHHHHHHHHhCCCcccc-------------------ccCCccHHHHHHHcChHHHHHHHHHcCCC-CCcccCCCCC
Confidence 999999999999999876422 23899999999999999999999999998 6688999999
Q ss_pred H-HHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCccccccC
Q 027562 161 P-LYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILISFY 222 (222)
Q Consensus 161 ~-l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~ 222 (222)
| ||+|+..++.+++++|+++|++++..+. .|+..++.+++++|+++|+++....|
T Consensus 197 ~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~iv~~Ll~~g~~~~~~~~ 252 (285)
T 3kea_A 197 PDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAEIAKMIIEKHVEYKSDSY 252 (285)
T ss_dssp TTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHHHHHHHHHHHHHHTTCTT
T ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHHHHHHHHHcCCCCCCccc
Confidence 8 9999999999999999999999999873 56778999999999999999876554
No 48
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=5.3e-35 Score=201.25 Aligned_cols=164 Identities=25% Similarity=0.224 Sum_probs=147.8
Q ss_pred CCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhH
Q 027562 34 KNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTA 113 (222)
Q Consensus 34 g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~ 113 (222)
+.+|||. |+..|+.+.++.+++ .....++..+..|.||||+|+..|+.+++++|+++|++++.
T Consensus 2 ~~~~L~~--A~~~g~~~~v~~ll~---~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------ 64 (172)
T 3v30_A 2 DSLSIHQ--LAAQGELDQLKEHLR---KGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHI------------ 64 (172)
T ss_dssp --CCHHH--HHHTTCHHHHHHHHT---TCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC------------
T ss_pred chhhHHH--HHHcCCHHHHHHHHH---cCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchh------------
Confidence 5689999 999999888888766 35555788899999999999999999999999999988776
Q ss_pred HHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCcc
Q 027562 114 RHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKT 193 (222)
Q Consensus 114 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 193 (222)
.+..|.||||+|+..|+.+++++|++.|++ .+..|..|+||||+|+..++.+++++|+++|++++.++..|.|
T Consensus 65 ------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t 137 (172)
T 3v30_A 65 ------LAKERESALSLASTGGYTDIVGLLLERDVD-INIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYT 137 (172)
T ss_dssp ------CCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred ------hcccCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence 788999999999999999999999999998 6688999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccchhHHHHHhcCCcccccc
Q 027562 194 ALHAAAMKSYFGKFSYTLSVGISILISF 221 (222)
Q Consensus 194 ~l~~a~~~~~~~~~~~Ll~~ga~~~~~~ 221 (222)
||++|+..++.+++++|+++|+++....
T Consensus 138 ~l~~A~~~~~~~~~~~L~~~~~~~~~~~ 165 (172)
T 3v30_A 138 PMDLAVALGYRKVQQVIENHILKLFQSN 165 (172)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHSCC-
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999887654
No 49
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=3e-36 Score=217.62 Aligned_cols=173 Identities=24% Similarity=0.184 Sum_probs=153.3
Q ss_pred hhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhh
Q 027562 29 LTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELES 108 (222)
Q Consensus 29 ~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 108 (222)
..|..|.||||+ |+..|+.++++.|++.....+..++..+..|.||||+|+..|+.+++++|+++|++++.
T Consensus 3 ~~d~~g~t~L~~--A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------- 73 (236)
T 1ikn_D 3 QLTEDGDSFLHL--AIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPEL------- 73 (236)
T ss_dssp ----CCCCTTHH--HHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCC-------
T ss_pred cCCCCCCchhHH--HHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-------
Confidence 467899999999 99999999999998877666667889999999999999999999999999999988776
Q ss_pred hhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCC-----CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q 027562 109 GIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDY-----PYSANNDGKTPLYMAADYRSSDMVLALLENSTS 183 (222)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~-----~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~ 183 (222)
.+..|.||||+|+..|+.+++++|++.+.+. .+..+..|.||||+|+..++.+++++|+++|++
T Consensus 74 -----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 142 (236)
T 1ikn_D 74 -----------RDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD 142 (236)
T ss_dssp -----------CCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred -----------cCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 7889999999999999999999999998642 346778899999999999999999999999999
Q ss_pred CccCCC-CCccHHHHHHHhccchhHHHHHhcCCcccccc
Q 027562 184 ASHEGP-NGKTALHAAAMKSYFGKFSYTLSVGISILISF 221 (222)
Q Consensus 184 ~~~~~~-~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~ 221 (222)
++.++. .|.||||+|+..++.+++++|+++|++++..+
T Consensus 143 ~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~ 181 (236)
T 1ikn_D 143 VNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVT 181 (236)
T ss_dssp TTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCC
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccc
Confidence 999997 99999999999999999999999999999765
No 50
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=7e-35 Score=199.71 Aligned_cols=161 Identities=22% Similarity=0.211 Sum_probs=150.0
Q ss_pred cCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhh
Q 027562 33 TKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRT 112 (222)
Q Consensus 33 ~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 112 (222)
.|.||||. |+..|+.++++++++. +..++..+..|.||||+|+..|+.+++++|++.|++++.
T Consensus 2 ~~~t~L~~--A~~~g~~~~v~~ll~~----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~----------- 64 (167)
T 3v31_A 2 ANSLSVHQ--LAAQGEMLYLATRIEQ----ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL----------- 64 (167)
T ss_dssp TTCCCHHH--HHHTTCHHHHHHHHHH----SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-----------
T ss_pred CCcchHHH--HHHCCCHHHHHHHHHc----CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-----------
Confidence 58899999 9999999999998874 455788899999999999999999999999999988776
Q ss_pred HHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCc
Q 027562 113 ARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGK 192 (222)
Q Consensus 113 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~ 192 (222)
.+..|.||||+|+..|+.+++++|++.|++ .+..|..|.||||+|+..++.+++++|+++|++++.++..|.
T Consensus 65 -------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 136 (167)
T 3v31_A 65 -------LGKGRESALSLACSKGYTDIVKMLLDCGVD-VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGY 136 (167)
T ss_dssp -------CCTTCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred -------cCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 788999999999999999999999999999 668899999999999999999999999999999999999999
Q ss_pred cHHHHHHHhccchhHHHHHhcCCccc
Q 027562 193 TALHAAAMKSYFGKFSYTLSVGISIL 218 (222)
Q Consensus 193 t~l~~a~~~~~~~~~~~Ll~~ga~~~ 218 (222)
||+++|+..|+.+++++|+++++++.
T Consensus 137 t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 137 NSMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999998764
No 51
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=7.9e-35 Score=201.64 Aligned_cols=167 Identities=21% Similarity=0.223 Sum_probs=152.5
Q ss_pred hcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhh
Q 027562 32 KTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIR 111 (222)
Q Consensus 32 ~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~ 111 (222)
.++.++||. |+..|+.++++.+++ ..+..++..+..|.||||.|+..|+.+++++|++.|++++.
T Consensus 3 ~~~~~~l~~--A~~~g~~~~v~~ll~---~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---------- 67 (179)
T 3f6q_A 3 PEFMDDIFT--QCREGNAVAVRLWLD---NTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINV---------- 67 (179)
T ss_dssp ----CCHHH--HHHHTCHHHHHHHHH---CTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC----------
T ss_pred HHHHHHHHH--HHHcCCHHHHHHHHh---cCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC----------
Confidence 468899999 999999999988876 45667888999999999999999999999999999988776
Q ss_pred hHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCC
Q 027562 112 TARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNG 191 (222)
Q Consensus 112 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g 191 (222)
.+..|.||||+|+..|+.+++++|++.|++ .+..|..|.||||+|+..++.+++++|+++|++++.++..|
T Consensus 68 --------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 138 (179)
T 3f6q_A 68 --------MNRGDDTPLHLAASHGHRDIVQKLLQYKAD-INAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYG 138 (179)
T ss_dssp --------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTS
T ss_pred --------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCC
Confidence 788999999999999999999999999999 66889999999999999999999999999999999999999
Q ss_pred ccHHHHHHHhccchhHHHHHhcCCccccccC
Q 027562 192 KTALHAAAMKSYFGKFSYTLSVGISILISFY 222 (222)
Q Consensus 192 ~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~ 222 (222)
.||+++|+..++.+++++|+++|++++...+
T Consensus 139 ~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~~ 169 (179)
T 3f6q_A 139 EMPVDKAKAPLRELLRERAEKMGQNLNRIPY 169 (179)
T ss_dssp CCGGGGSCHHHHHHHHHHHHHTTCCCSCBCC
T ss_pred CCcHHHHHHHHHHHHHHHHHHhhcCcccCCc
Confidence 9999999999999999999999999987543
No 52
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=5.5e-35 Score=199.22 Aligned_cols=158 Identities=20% Similarity=0.208 Sum_probs=136.0
Q ss_pred cCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhh
Q 027562 33 TKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRT 112 (222)
Q Consensus 33 ~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 112 (222)
...||||. |+..|+.+++++|++ .+..++..+..|.||||+|+. |+.+++++|++.|++++.
T Consensus 4 ~~~~~L~~--A~~~g~~~~v~~Ll~----~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~----------- 65 (162)
T 1ihb_A 4 PWGNELAS--AAARGDLEQLTSLLQ----NNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDL----------- 65 (162)
T ss_dssp -CHHHHHH--HHHHTCHHHHHHHTT----SCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTC-----------
T ss_pred hHhhHHHH--HHHcCCHHHHHHHHh----CCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCC-----------
Confidence 45688888 888888888888775 455677788889999999888 899999999998887765
Q ss_pred HHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC-CccCCCCC
Q 027562 113 ARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTS-ASHEGPNG 191 (222)
Q Consensus 113 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~-~~~~~~~g 191 (222)
.+..|.||||+|+..|+.+++++|++.|++ ++..|..|+||||+|+..++.+++++|+++|++ ++.++..|
T Consensus 66 -------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g 137 (162)
T 1ihb_A 66 -------KDRTGFAVIHDAARAGFLDTLQTLLEFQAD-VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKG 137 (162)
T ss_dssp -------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTS
T ss_pred -------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCC
Confidence 678899999999999999999999999988 667888999999999999999999999999988 58899999
Q ss_pred ccHHHHHHHhccchhHHHHHhcCCc
Q 027562 192 KTALHAAAMKSYFGKFSYTLSVGIS 216 (222)
Q Consensus 192 ~t~l~~a~~~~~~~~~~~Ll~~ga~ 216 (222)
.||||+|+..++.+++++|+++|||
T Consensus 138 ~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 138 DTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred CcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 9999999999999999999999986
No 53
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=4.2e-34 Score=196.19 Aligned_cols=160 Identities=23% Similarity=0.282 Sum_probs=146.2
Q ss_pred hhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhh
Q 027562 30 TAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESG 109 (222)
Q Consensus 30 ~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 109 (222)
....+.++|+. |+..|+.+++++|++ .+..++..+..|.||||.|+..|+.+++++|++.|++++.
T Consensus 10 ~~~~~~~~l~~--A~~~g~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-------- 75 (169)
T 2y1l_E 10 HGSDLGKKLLE--AARAGRDDEVRILMA----NGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNA-------- 75 (169)
T ss_dssp ---CHHHHHHH--HHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--------
T ss_pred CCCcccchHHH--HHHcCCHHHHHHHHH----CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc--------
Confidence 44567889999 999999999999887 3566788899999999999999999999999999988766
Q ss_pred hhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCC
Q 027562 110 IRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGP 189 (222)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~ 189 (222)
.+..|.||||+|+..|+.+++++|++.|++ .+..|..|.||||+|+..++.+++++|+++|++++.++.
T Consensus 76 ----------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 144 (169)
T 2y1l_E 76 ----------VDHAGMTPLRLAALFGHLEIVEVLLKNGAD-VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDK 144 (169)
T ss_dssp ----------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred ----------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 788999999999999999999999999999 668899999999999999999999999999999999999
Q ss_pred CCccHHHHHHHhccchhHHHHHhcC
Q 027562 190 NGKTALHAAAMKSYFGKFSYTLSVG 214 (222)
Q Consensus 190 ~g~t~l~~a~~~~~~~~~~~Ll~~g 214 (222)
.|.||+++|+..++.+++++|+++|
T Consensus 145 ~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 145 FGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 9999999999999999999999987
No 54
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=8.9e-34 Score=204.10 Aligned_cols=167 Identities=27% Similarity=0.234 Sum_probs=148.6
Q ss_pred cCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhh
Q 027562 33 TKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRT 112 (222)
Q Consensus 33 ~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 112 (222)
.|.||||+ |+..|+.++++.|++ ..+..++..|..|+||||+|+..|+.+++++|++.|+++...
T Consensus 2 ~g~t~L~~--A~~~g~~~~v~~Ll~---~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~---------- 66 (232)
T 2rfa_A 2 IWESPLLL--AAKENDVQALSKLLK---FEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFE---------- 66 (232)
T ss_dssp CTTCHHHH--HHHTTCHHHHHHHHT---TTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGC----------
T ss_pred CCCCHHHH--HHHcCCHHHHHHHHH---hcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccc----------
Confidence 58999999 999999998888876 346778899999999999999999999999999999876321
Q ss_pred HHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCC-------------CCCCHHHHHHHcCCHHHHHHHHh
Q 027562 113 ARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANN-------------DGKTPLYMAADYRSSDMVLALLE 179 (222)
Q Consensus 113 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-------------~g~t~l~~a~~~~~~~~~~~Ll~ 179 (222)
..+..+..|.||||+|+..|+.+++++|++.|++ .+..+. .|.||||+|+..++.+++++|++
T Consensus 67 ---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 142 (232)
T 2rfa_A 67 ---PMTSELYEGQTALHIAVINQNVNLVRALLARGAS-VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE 142 (232)
T ss_dssp ---CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHH
T ss_pred ---cccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCC-CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHH
Confidence 0123577899999999999999999999999988 444443 79999999999999999999999
Q ss_pred cCCCCccCCCCCccHHHHHHHhccchhH----HHHHhcCCccc
Q 027562 180 NSTSASHEGPNGKTALHAAAMKSYFGKF----SYTLSVGISIL 218 (222)
Q Consensus 180 ~g~~~~~~~~~g~t~l~~a~~~~~~~~~----~~Ll~~ga~~~ 218 (222)
+|++++.+|..|+||||+|+..++.+++ ++|+++|++++
T Consensus 143 ~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 143 HGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDH 185 (232)
T ss_dssp TTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCS
T ss_pred CCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchh
Confidence 9999999999999999999999999988 99999999884
No 55
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=1.8e-34 Score=210.78 Aligned_cols=175 Identities=21% Similarity=0.170 Sum_probs=151.7
Q ss_pred cCCCchhHHhhhcccccccHHHHHHHHHhCCccccc----cccCCChHHHHHHHh---CCHHHHHHHHHhhhhhhhhhhH
Q 027562 33 TKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQ----VNAKGETPLHVAAKF---GHSDIVRVLVERAKLLQHENEE 105 (222)
Q Consensus 33 ~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~t~L~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~ 105 (222)
.|.||||. |+..|+.+.++.+++++...+..++. .+..|.||||+|+.. |+.+++++|++.|++.+.....
T Consensus 1 ~G~t~L~~--A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 78 (256)
T 2etb_A 1 FDRDRLFS--VVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPL 78 (256)
T ss_dssp CCHHHHHH--HHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCG
T ss_pred CCccHHHH--HHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhh
Confidence 37899999 99999999998888887777777887 899999999999999 9999999999999887642100
Q ss_pred hhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCC-------------CCCHHHHHHHcCCHH
Q 027562 106 LESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANND-------------GKTPLYMAADYRSSD 172 (222)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~-------------g~t~l~~a~~~~~~~ 172 (222)
........+..|.||||+|+..|+.+++++|++.|++ ++..+.. |.||||+|+..++.+
T Consensus 79 -------~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~ 150 (256)
T 2etb_A 79 -------VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD-VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWD 150 (256)
T ss_dssp -------GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHH
T ss_pred -------cccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcccccccccccccccccCCCCHHHHHHHcCCHH
Confidence 0000112346799999999999999999999999998 5566665 999999999999999
Q ss_pred HHHHHHh---cCCCCccCCCCCccHHHHHHH--hccch-------hHHHHHhcCCcc
Q 027562 173 MVLALLE---NSTSASHEGPNGKTALHAAAM--KSYFG-------KFSYTLSVGISI 217 (222)
Q Consensus 173 ~~~~Ll~---~g~~~~~~~~~g~t~l~~a~~--~~~~~-------~~~~Ll~~ga~~ 217 (222)
++++|++ +|++++.+|..|+||||+|+. .++.+ ++++|+++|+++
T Consensus 151 ~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 151 VVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp HHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCc
Confidence 9999999 999999999999999999999 77888 999999999999
No 56
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=1.3e-34 Score=197.38 Aligned_cols=158 Identities=22% Similarity=0.197 Sum_probs=145.8
Q ss_pred CChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHH
Q 027562 1 MDPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVA 80 (222)
Q Consensus 1 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a 80 (222)
++|||+.|+..|+.+++++|++.|.+++..+..|.||||+ |+. |+.+++++|++ .+..++..+..|.||||.|
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~--A~~-~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A 77 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQV--MKL-GNPEIARRLLL----RGANPDLKDRTGFAVIHDA 77 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHH--CCS-SCHHHHHHHHH----TTCCTTCCCTTSCCHHHHH
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHH--HHc-CcHHHHHHHHH----cCCCCCCCCCCCCCHHHHH
Confidence 3689999999999999999999999988889999999999 888 99999999887 3566788899999999999
Q ss_pred HHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCC
Q 027562 81 AKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKT 160 (222)
Q Consensus 81 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 160 (222)
+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.|++..+..+..|.|
T Consensus 78 ~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t 139 (162)
T 1ihb_A 78 ARAGFLDTLQTLLEFQADVNI------------------EDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDT 139 (162)
T ss_dssp HHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCC
T ss_pred HHcCCHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCc
Confidence 999999999999999988776 78899999999999999999999999999866788999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCC
Q 027562 161 PLYMAADYRSSDMVLALLENSTS 183 (222)
Q Consensus 161 ~l~~a~~~~~~~~~~~Ll~~g~~ 183 (222)
|||+|+..++.+++++|+++|++
T Consensus 140 ~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 140 ACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHHHHcCCHHHHHHHHHhCCC
Confidence 99999999999999999999985
No 57
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=5.7e-34 Score=209.97 Aligned_cols=180 Identities=21% Similarity=0.224 Sum_probs=152.5
Q ss_pred HHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCcccc----ccccCCChHHHHHHHh---CCHHHHHHHHHhhh
Q 027562 25 IKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLL----QVNAKGETPLHVAAKF---GHSDIVRVLVERAK 97 (222)
Q Consensus 25 ~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~t~L~~a~~~---~~~~~~~~Ll~~~~ 97 (222)
......+..|.||||+ |+..|+.++++.|++.+...+..++ ..+..|+||||+|+.. |+.+++++|++.|+
T Consensus 4 a~~~~~d~~g~t~L~~--A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga 81 (273)
T 2pnn_A 4 AGEKPPRLYDRRSIFD--AVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVAR 81 (273)
T ss_dssp -------CCCHHHHHH--HHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHH
T ss_pred ccCCCCCcccchHHHH--HHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhc
Confidence 3344578899999999 9999999999999998776665554 4588999999999987 99999999999998
Q ss_pred hhhhhhhHhhhhhhhHHHHhhh----ccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCC--------------CCC
Q 027562 98 LLQHENEELESGIRTARHMIRM----TNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANN--------------DGK 159 (222)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~--------------~g~ 159 (222)
+.+.. ...++. .+..|.||||+|+..|+.+++++|++.|++ ++..+. .|.
T Consensus 82 ~~~~~-----------~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~ 149 (273)
T 2pnn_A 82 KTDSL-----------KQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD-VQAAANGDFFKKTKGRPGFYFGE 149 (273)
T ss_dssp HTTCH-----------HHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCBCSGGGSSCSSSCCCCSCB
T ss_pred cccch-----------hHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cCccccccccccccccccccCCC
Confidence 65431 111222 567899999999999999999999999999 556665 799
Q ss_pred CHHHHHHHcCCHHHHHHHHh---cCCCCccCCCCCccHHHHHHHhcc---------chhHHHHHhcCCccc
Q 027562 160 TPLYMAADYRSSDMVLALLE---NSTSASHEGPNGKTALHAAAMKSY---------FGKFSYTLSVGISIL 218 (222)
Q Consensus 160 t~l~~a~~~~~~~~~~~Ll~---~g~~~~~~~~~g~t~l~~a~~~~~---------~~~~~~Ll~~ga~~~ 218 (222)
||||+|+..++.+++++|++ +|++++.++..|+||||+|+..++ .+++++|+++|++++
T Consensus 150 tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n 220 (273)
T 2pnn_A 150 LPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLH 220 (273)
T ss_dssp SHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999 999999999999999999999988 799999999999996
No 58
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=1.1e-34 Score=199.62 Aligned_cols=168 Identities=21% Similarity=0.155 Sum_probs=149.4
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHH-HHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIK-RLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVA 80 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~-~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a 80 (222)
.||||.|+..|+.+.+++|++.+.+ .+..+..|.||||+ |+..|+.+++++|++. +..++..+..|.||||+|
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~--A~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A 76 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIW--ASAFGEIETVRFLLEW----GADPHILAKERESALSLA 76 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHH--HHHTTCHHHHHHHHHH----TCCTTCCCTTCCCHHHHH
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHH--HHHcCCHHHHHHHHHc----CCCchhhcccCCCHHHHH
Confidence 3789999999999999999998876 56778899999999 9999999999999874 456788899999999999
Q ss_pred HHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCC
Q 027562 81 AKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKT 160 (222)
Q Consensus 81 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 160 (222)
+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.|++ .+..+..|.|
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t 137 (172)
T 3v30_A 77 STGGYTDIVGLLLERDVDINI------------------YDWNGGTPLLYAVRGNHVKCVEALLARGAD-LTTEADSGYT 137 (172)
T ss_dssp HHTTCHHHHHHHHTTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred HHCCCHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCC
Confidence 999999999999999988776 789999999999999999999999999999 6688999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccH
Q 027562 161 PLYMAADYRSSDMVLALLENSTSASHEGPNGKTA 194 (222)
Q Consensus 161 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 194 (222)
|||+|+..++.+++++|+++|+++...+..|.||
T Consensus 138 ~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 138 PMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 9999999999999999999999999988888887
No 59
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=100.00 E-value=1.9e-34 Score=197.15 Aligned_cols=161 Identities=19% Similarity=0.177 Sum_probs=145.5
Q ss_pred hhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhh
Q 027562 30 TAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESG 109 (222)
Q Consensus 30 ~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 109 (222)
.+..|.+|||. |+..|+.++++.+++ ..+...+..+..|.||||+|+..|+.+++++|+++|++++.
T Consensus 4 ~~~~~~~~l~~--A~~~g~~~~v~~ll~---~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-------- 70 (165)
T 3twr_A 4 GNSEADRQLLE--AAKAGDVETVKKLCT---VQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHA-------- 70 (165)
T ss_dssp --CHHHHHHHH--HHHHTCHHHHHHHCC---TTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC--------
T ss_pred CcchhhHHHHH--HHHhCCHHHHHHHHH---cCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCc--------
Confidence 46688999999 999999988888876 34556677888999999999999999999999999988776
Q ss_pred hhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCC
Q 027562 110 IRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGP 189 (222)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~ 189 (222)
.+..|.||||+|+..|+.+++++|++.|++ .+..|..|+||||+|+..++.+++++|+++|++++.++.
T Consensus 71 ----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 139 (165)
T 3twr_A 71 ----------KDKGGLVPLHNACSYGHYEVAELLVKHGAV-VNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNR 139 (165)
T ss_dssp ----------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred ----------cCCCCCCHHHHHHHcCcHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 788999999999999999999999999999 668899999999999999999999999999999999999
Q ss_pred CCccHHHHHHHhccchhHHHHHhcCC
Q 027562 190 NGKTALHAAAMKSYFGKFSYTLSVGI 215 (222)
Q Consensus 190 ~g~t~l~~a~~~~~~~~~~~Ll~~ga 215 (222)
.|.||+++|+. ++.+++++|+++||
T Consensus 140 ~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 140 DGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp TSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CCCChhHhHhc-CChHHHHHHhhccc
Confidence 99999999877 88999999999997
No 60
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=2.5e-33 Score=197.52 Aligned_cols=167 Identities=19% Similarity=0.177 Sum_probs=152.1
Q ss_pred hcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhh
Q 027562 32 KTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIR 111 (222)
Q Consensus 32 ~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~ 111 (222)
..+.||||. |+..|+.+.++.++. ..+..++..+..|.||||+|+..|+.+++++|++.|++++.
T Consensus 3 ~~~~~~L~~--A~~~g~~~~v~~ll~---~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---------- 67 (201)
T 3hra_A 3 TYEVGALLE--AANQRDTKKVKEILQ---DTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINL---------- 67 (201)
T ss_dssp CCCTTHHHH--HHHTTCHHHHHHHHT---CTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC----------
T ss_pred cccccHHHH--HHHhccHHHHHHHHH---cCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC----------
Confidence 468999999 999999888877765 45557888999999999999999999999999999998776
Q ss_pred hHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcC-CCCccCCCC
Q 027562 112 TARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENS-TSASHEGPN 190 (222)
Q Consensus 112 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g-~~~~~~~~~ 190 (222)
.+..|.||+|+|+..|+.+++++|++.+....+..+..|.||||+|+..++.+++++|+++| ++++.++..
T Consensus 68 --------~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 139 (201)
T 3hra_A 68 --------QNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDF 139 (201)
T ss_dssp --------CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTT
T ss_pred --------CCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCC
Confidence 78899999999999999999999996554337788999999999999999999999999999 999999999
Q ss_pred CccHHHHHHHhcc-----chhHHHHHhcCCcccccc
Q 027562 191 GKTALHAAAMKSY-----FGKFSYTLSVGISILISF 221 (222)
Q Consensus 191 g~t~l~~a~~~~~-----~~~~~~Ll~~ga~~~~~~ 221 (222)
|.||||+|+..++ .+++++|+++|++++..+
T Consensus 140 g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~ 175 (201)
T 3hra_A 140 GYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKD 175 (201)
T ss_dssp SCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCC
T ss_pred CCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccC
Confidence 9999999999987 899999999999999865
No 61
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=2.7e-34 Score=214.23 Aligned_cols=204 Identities=21% Similarity=0.205 Sum_probs=168.4
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAA 81 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~ 81 (222)
.||||.|+..|+.+++++|++.|.+++..+..|.||||+ |+..|+.+++++|++ .+..++..+..|.||||+|+
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~--A~~~g~~~~v~~Ll~----~g~~~~~~~~~g~t~l~~A~ 147 (299)
T 1s70_B 74 LTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHA--AASCGYLDIAEYLIS----QGAHVGAVNSEGDTPLDIAE 147 (299)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH--HHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH--HHHcCCHHHHHHHHh----CCCCCCCcCCCCCCHHHHHH
Confidence 489999999999999999999999999899999999999 999999999999988 35667888999999999999
Q ss_pred HhCCHHHHHHHHHh-hhhhhhhhhHhhhhhh-hHHHHh-------hhccccCchHhHHHHhcCChHHHHHHHhcCCCCCC
Q 027562 82 KFGHSDIVRVLVER-AKLLQHENEELESGIR-TARHMI-------RMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPY 152 (222)
Q Consensus 82 ~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~ 152 (222)
..++.+++++++.. +.+++........... .....+ ...+..|.||||+|+..|+.+++++|++.|++ ++
T Consensus 148 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d-~~ 226 (299)
T 1s70_B 148 EEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD-VN 226 (299)
T ss_dssp SHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TT
T ss_pred hcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCC-CC
Confidence 99999999988764 3443332222111111 111111 12456799999999999999999999999999 67
Q ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhc
Q 027562 153 SANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSV 213 (222)
Q Consensus 153 ~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 213 (222)
..|..|+||||+|+..++.+++++|+++|++++.+|..|.||+++|+.. ..+.++.+++.
T Consensus 227 ~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~-~~~~l~~l~~~ 286 (299)
T 1s70_B 227 IKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADED-ILGYLEELQKK 286 (299)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSG-GGHHHHHHHHH
T ss_pred CcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHH-HHHHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999764 44555555544
No 62
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=4.9e-34 Score=215.36 Aligned_cols=187 Identities=17% Similarity=0.159 Sum_probs=147.8
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccc---cccHHHHHHHHHhCCccccccccCCChHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESE---NASTKFVEEILEKCPLLLLQVNAKGETPLH 78 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~ 78 (222)
.||||+|+..|+.++|++|++.|.+++..+..|.||||+ |+..|+ .++++.+++.+.. .++..+..|+||||
T Consensus 132 ~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~--A~~~g~~~~~~~~~~ll~~~~~---~~~~~d~~g~tpLh 206 (327)
T 1sw6_A 132 NTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVK--AVKSVNNYDSGTFEALLDYLYP---CLILEDSMNRTILH 206 (327)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHH--HHHSSHHHHTTCHHHHHHHHGG---GGGEECTTCCCHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH--HHHhcccccHHHHHHHHHhhhc---cccCCCCCCCCHHH
Confidence 589999999999999999999999999999999999999 999888 7889888887643 47888999999999
Q ss_pred HHHH----hCCHHHHHHHHHhhhhhhhhhhH--hhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCC
Q 027562 79 VAAK----FGHSDIVRVLVERAKLLQHENEE--LESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPY 152 (222)
Q Consensus 79 ~a~~----~~~~~~~~~Ll~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~ 152 (222)
+|+. .|+.+++++|++.+..+..+... ...........++..+..|.||||.|+. +++|++.+ .+
T Consensus 207 ~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~~---~n 277 (327)
T 1sw6_A 207 HIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIANM---LN 277 (327)
T ss_dssp HHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHHT---TT
T ss_pred HHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHhC---CC
Confidence 9999 89999999999987654332110 0001111134456688999999999985 89999884 45
Q ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhc
Q 027562 153 SANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKS 202 (222)
Q Consensus 153 ~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~ 202 (222)
..|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|++.|
T Consensus 278 ~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 278 AQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp CCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 78999999999999999999999999999999999999999999998654
No 63
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-34 Score=218.46 Aligned_cols=184 Identities=17% Similarity=0.115 Sum_probs=151.3
Q ss_pred HHHHHHcCCchhHHHHHHHHHHHHh-hhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHh
Q 027562 5 LFKAAAAGNLEPFKDIAREVIKRLL-TAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKF 83 (222)
Q Consensus 5 l~~A~~~g~~~~v~~ll~~~~~~~~-~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~ 83 (222)
+|.|+..+..++++.|++.|.+++. .+..|.||||+ |+..|+.+++++|++ .+..++..+..|+||||+|+..
T Consensus 101 ~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~--Aa~~g~~~~v~~Ll~----~Gad~n~~d~~g~TpLh~A~~~ 174 (327)
T 1sw6_A 101 QHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHW--LTSIANLELVKHLVK----HGSNRLYGDNMGESCLVKAVKS 174 (327)
T ss_dssp ---CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHH--HHHTTCHHHHHHHHH----TTCCTTBCCTTCCCHHHHHHHS
T ss_pred hHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHH--HHHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHh
Confidence 4566666677788888888898888 89999999999 999999999999988 4677889999999999999999
Q ss_pred CC---HHHHHHHHHhh-hhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHh----cCChHHHHHHHhc---------
Q 027562 84 GH---SDIVRVLVERA-KLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVC----HQNVDVVEILTKE--------- 146 (222)
Q Consensus 84 ~~---~~~~~~Ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~----~~~~~~~~~Ll~~--------- 146 (222)
|+ .++++.|++.+ ++++. .+..|.||||+|+. .|+.+++++|++.
T Consensus 175 g~~~~~~~~~~ll~~~~~~~~~------------------~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~ 236 (327)
T 1sw6_A 175 VNNYDSGTFEALLDYLYPCLIL------------------EDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQ 236 (327)
T ss_dssp SHHHHTTCHHHHHHHHGGGGGE------------------ECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGG
T ss_pred cccccHHHHHHHHHhhhccccC------------------CCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhccc
Confidence 98 68888888886 44443 89999999999999 8999999999987
Q ss_pred -----------CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCC
Q 027562 147 -----------DPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGI 215 (222)
Q Consensus 147 -----------~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga 215 (222)
|.+ ++..+..|.||||.|+. +++|+++ +++.++..|+||||+|+..|+.+++++|+++||
T Consensus 237 ~~~i~~~~~~~g~~-~~~~~~~g~t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Ga 307 (327)
T 1sw6_A 237 NRPIQSGTNEKESK-PNDKNGERKDSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGA 307 (327)
T ss_dssp GCCEEEC-----------------CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTC
T ss_pred chHHHhhhhcccCC-cccccccCCChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 666 66889999999999985 8999988 588899999999999999999999999999999
Q ss_pred cccccc
Q 027562 216 SILISF 221 (222)
Q Consensus 216 ~~~~~~ 221 (222)
|+++.+
T Consensus 308 d~~~~d 313 (327)
T 1sw6_A 308 DPFIAN 313 (327)
T ss_dssp CTTCCC
T ss_pred CCcccC
Confidence 999875
No 64
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=4.5e-33 Score=191.05 Aligned_cols=155 Identities=25% Similarity=0.291 Sum_probs=144.2
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAA 81 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~ 81 (222)
.++|+.|+..|+.+++++|++.|.+++..+..|.||||+ |+..|+.+++++|++ .+..++..+..|.||||.|+
T Consensus 15 ~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~--A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~ 88 (169)
T 2y1l_E 15 GKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHL--AAFNGHLEIVEVLLK----NGADVNAVDHAGMTPLRLAA 88 (169)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH--HHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHH
T ss_pred cchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHH--HHHcCCHHHHHHHHH----cCCCCCccCCCCCCHHHHHH
Confidence 368999999999999999999999998889999999999 999999999999987 35667888999999999999
Q ss_pred HhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCH
Q 027562 82 KFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTP 161 (222)
Q Consensus 82 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 161 (222)
..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.|++ .+..|..|.||
T Consensus 89 ~~~~~~~~~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~ 149 (169)
T 2y1l_E 89 LFGHLEIVEVLLKNGADVNA------------------NDMEGHTPLHLAAMFGHLEIVEVLLKNGAD-VNAQDKFGKTA 149 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred HcCCHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCH
Confidence 99999999999999988776 788999999999999999999999999999 66889999999
Q ss_pred HHHHHHcCCHHHHHHHHhcC
Q 027562 162 LYMAADYRSSDMVLALLENS 181 (222)
Q Consensus 162 l~~a~~~~~~~~~~~Ll~~g 181 (222)
+++|+..++.+++++|+++|
T Consensus 150 l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 150 FDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHHHTTCHHHHHHHHTC-
T ss_pred HHHHHHhCCHHHHHHHHHcC
Confidence 99999999999999999876
No 65
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=3.1e-33 Score=191.52 Aligned_cols=160 Identities=17% Similarity=0.130 Sum_probs=147.8
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAA 81 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~ 81 (222)
.||||.|+..|+.+++++|++.+.+++..+..|.||||+ |+..|+.+++++|++. +..++..+..|.||||.|+
T Consensus 4 ~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~--A~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~ 77 (167)
T 3v31_A 4 SLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMW--AAAHGQIAVVEFLLQN----GADPQLLGKGRESALSLAC 77 (167)
T ss_dssp CCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHH--HHHTTCHHHHHHHHHT----TCCTTCCCTTCCCHHHHHH
T ss_pred cchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHH--HHHCCCHHHHHHHHHc----CCCCCCcCCCCCcHHHHHH
Confidence 589999999999999999999998888889999999999 9999999999999873 5667888999999999999
Q ss_pred HhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCH
Q 027562 82 KFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTP 161 (222)
Q Consensus 82 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 161 (222)
..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.|++ ++..+..|.||
T Consensus 78 ~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~ 138 (167)
T 3v31_A 78 SKGYTDIVKMLLDCGVDVNE------------------YDWNGGTPLLYAVHGNHVKCVKMLLESGAD-PTIETDSGYNS 138 (167)
T ss_dssp HHTCHHHHHHHHHHTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred HcCCHHHHHHHHHCCCCCCc------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCH
Confidence 99999999999999988776 788999999999999999999999999999 66889999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCcc
Q 027562 162 LYMAADYRSSDMVLALLENSTSASH 186 (222)
Q Consensus 162 l~~a~~~~~~~~~~~Ll~~g~~~~~ 186 (222)
+++|+..++.+++++|+++++++..
T Consensus 139 l~~A~~~~~~~~~~~L~~~~~~~~~ 163 (167)
T 3v31_A 139 MDLAVALGYRSVQQVIESHLLKLLQ 163 (167)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 9999999999999999998765543
No 66
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-32 Score=185.85 Aligned_cols=151 Identities=19% Similarity=0.209 Sum_probs=132.7
Q ss_pred CCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhH
Q 027562 34 KNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTA 113 (222)
Q Consensus 34 g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~ 113 (222)
+.++|+. |+..|+.++++++++... .++ .+..|.||||.|+..|+.+++++|++.|++++.
T Consensus 2 ~~~~L~~--A~~~g~~~~v~~Ll~~g~----~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------ 62 (153)
T 1awc_B 2 LGKKLLE--AARAGQDDEVRILMANGA----PFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA------------ 62 (153)
T ss_dssp HHHHHHH--HHHHTCHHHHHHHHHHTC----CCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC------------
T ss_pred ccHHHHH--HHHcCCHHHHHHHHHcCC----CCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------------
Confidence 3467888 888888888888777422 222 477899999999999999999999999887766
Q ss_pred HHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCcc
Q 027562 114 RHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKT 193 (222)
Q Consensus 114 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 193 (222)
.+..|.||||+|+..|+.+++++|++.|++ ++..|..|+||||+|+..++.+++++|+++|++++.++..|.|
T Consensus 63 ------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t 135 (153)
T 1awc_B 63 ------RTKVDRTPLHMAASEGHANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKT 135 (153)
T ss_dssp ------CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred ------CCCCCCCHHHHHHHcChHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence 788899999999999999999999999998 6688999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccchhHHHH
Q 027562 194 ALHAAAMKSYFGKFSYT 210 (222)
Q Consensus 194 ~l~~a~~~~~~~~~~~L 210 (222)
|+++|+..|+.+++++|
T Consensus 136 ~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 136 AFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHh
Confidence 99999999999999987
No 67
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=100.00 E-value=1.1e-32 Score=186.67 Aligned_cols=154 Identities=16% Similarity=0.171 Sum_probs=141.7
Q ss_pred CCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhH
Q 027562 34 KNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTA 113 (222)
Q Consensus 34 g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~ 113 (222)
+.||||. |+..|+.++++.+++. .+..++..+..|.||||+ +..|+.+++++|++.|++++.
T Consensus 2 ~~~~L~~--A~~~g~~~~v~~ll~~---~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~------------ 63 (156)
T 1bd8_A 2 AGDRLSG--AAARGDVQEVRRLLHR---ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNV------------ 63 (156)
T ss_dssp HHHHHHH--HHHHTCHHHHHHHHHT---TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTC------------
T ss_pred cchHHHH--HHHhCCHHHHHHHHHh---hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCC------------
Confidence 4588999 9999999999888774 445678889999999999 999999999999999988776
Q ss_pred HHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCcc
Q 027562 114 RHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKT 193 (222)
Q Consensus 114 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 193 (222)
.+..|.||||+|+..|+.+++++|++.|++ ++..|..|+||||+|+..++.+++++|++. ++++.++..|.|
T Consensus 64 ------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t 135 (156)
T 1bd8_A 64 ------QDTSGTSPVHDAARTGFLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLT 135 (156)
T ss_dssp ------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCC
T ss_pred ------cCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCC
Confidence 788999999999999999999999999998 668899999999999999999999999999 999999999999
Q ss_pred HHHHHHHhccchhHHHHHhc
Q 027562 194 ALHAAAMKSYFGKFSYTLSV 213 (222)
Q Consensus 194 ~l~~a~~~~~~~~~~~Ll~~ 213 (222)
||++|+..++.+++++|+++
T Consensus 136 ~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 136 PLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHHHcCcHHHHHHHHhh
Confidence 99999999999999999975
No 68
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=7.1e-33 Score=193.91 Aligned_cols=155 Identities=18% Similarity=0.111 Sum_probs=145.1
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAA 81 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~ 81 (222)
.||||.|+..|+.+++++|++.+.+++..+..|.||||+ |+..|+.+++++|++. +..++..+..|.||||+|+
T Consensus 36 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~--A~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~ 109 (192)
T 2rfm_A 36 RTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIW--AVKNNRLGIAEKLLSK----GSNVNTKDFSGKTPLMWSI 109 (192)
T ss_dssp CCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHH--HHHTTCHHHHHHHHHH----TCCTTCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHH--HHHcCCHHHHHHHHHC----CCCCCCCCCCCCcHHHHHH
Confidence 589999999999999999999999988888999999999 9999999999999884 4567888999999999999
Q ss_pred HhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCH
Q 027562 82 KFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTP 161 (222)
Q Consensus 82 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 161 (222)
..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.|++ ++..|..|.||
T Consensus 110 ~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~ 170 (192)
T 2rfm_A 110 IFGYSEMSYFLLEHGANVND------------------RNLEGETPLIVASKYGRSEIVKKLLELGAD-ISARDLTGLTA 170 (192)
T ss_dssp HHTCHHHHHHHHHTTCCSSC------------------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCBCTTSCBH
T ss_pred HcCCHHHHHHHHHCCCCCCC------------------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCH
Confidence 99999999999999988776 789999999999999999999999999999 66889999999
Q ss_pred HHHHHHcCCHHHHHHHHhcC
Q 027562 162 LYMAADYRSSDMVLALLENS 181 (222)
Q Consensus 162 l~~a~~~~~~~~~~~Ll~~g 181 (222)
+++|+..++.+++++|+++|
T Consensus 171 l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 171 EASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHhCcHHHHHHHHhcc
Confidence 99999999999999999875
No 69
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=100.00 E-value=1.5e-32 Score=181.86 Aligned_cols=134 Identities=16% Similarity=0.122 Sum_probs=126.9
Q ss_pred CccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHH
Q 027562 63 PLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEI 142 (222)
Q Consensus 63 ~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ 142 (222)
+..++..+..|.||||.|+..|+.+++++|++.|++++. .+..|.||||+|+. ++.+++++
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~-~~~~~v~~ 62 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNA------------------LNRFGRRPIQVMMM-GSAQVAEL 62 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTCCTTTTTSTT-SCHHHHHH
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCC------------------cCCCCCCHHHHHHc-CCHHHHHH
Confidence 346788899999999999999999999999999988776 78899999999999 99999999
Q ss_pred HHhcCCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCc
Q 027562 143 LTKEDPDYPYSANND-GKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGIS 216 (222)
Q Consensus 143 Ll~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~ 216 (222)
|++.|++ ++..+.. |+||||+|+..++.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|||
T Consensus 63 Ll~~g~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 63 LLLHGAE-PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHTCC-SSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHCCCC-CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999 6688888 99999999999999999999999999999999999999999999999999999999996
No 70
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.98 E-value=2e-32 Score=200.31 Aligned_cols=177 Identities=21% Similarity=0.182 Sum_probs=151.0
Q ss_pred hcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccc----cCCChHHHHHH---HhCCHHHHHHHHHhhhhhhhhhh
Q 027562 32 KTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVN----AKGETPLHVAA---KFGHSDIVRVLVERAKLLQHENE 104 (222)
Q Consensus 32 ~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~t~L~~a~---~~~~~~~~~~Ll~~~~~~~~~~~ 104 (222)
..|.++||. |++.|+.+.++.+++++...+..++..+ ..|.||||+|+ ..|+.+++++|++.|++......
T Consensus 3 ~~~~~~L~~--A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~ 80 (260)
T 3jxi_A 3 VFNRPILFD--IVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMRE 80 (260)
T ss_dssp CCCHHHHHH--HHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHH
T ss_pred cchHHHHHH--HHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHh
Confidence 467899999 9999999999999887777666666555 67999999999 67999999999999976543111
Q ss_pred HhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCC--------------CCCCCHHHHHHHcCC
Q 027562 105 ELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSAN--------------NDGKTPLYMAADYRS 170 (222)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~--------------~~g~t~l~~a~~~~~ 170 (222)
.....+...+..|.||||+|+..|+.+++++|++.|++ ++..+ ..|+||||+|+..++
T Consensus 81 -------~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~ 152 (260)
T 3jxi_A 81 -------FINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD-VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQ 152 (260)
T ss_dssp -------HHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTC
T ss_pred -------hhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC-cCccccccccCcccccccccCCCCHHHHHHHcCC
Confidence 01112233556899999999999999999999999998 55666 689999999999999
Q ss_pred HHHHHHHHh---cCCCCccCCCCCccHHHHHHHhcc---------chhHHHHHhcCCccc
Q 027562 171 SDMVLALLE---NSTSASHEGPNGKTALHAAAMKSY---------FGKFSYTLSVGISIL 218 (222)
Q Consensus 171 ~~~~~~Ll~---~g~~~~~~~~~g~t~l~~a~~~~~---------~~~~~~Ll~~ga~~~ 218 (222)
.+++++|++ +|++++.+|..|+||||+|+..++ .+++++|+++|++++
T Consensus 153 ~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~ 212 (260)
T 3jxi_A 153 PHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLF 212 (260)
T ss_dssp HHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccc
Confidence 999999999 999999999999999999998887 699999999999993
No 71
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=1.6e-32 Score=198.39 Aligned_cols=164 Identities=20% Similarity=0.142 Sum_probs=120.8
Q ss_pred hhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhh
Q 027562 31 AKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGI 110 (222)
Q Consensus 31 ~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~ 110 (222)
+..|.||||. |+..+..+.++.+++...+ ++. +..|.||||.|+..|+.+++++|++.|++++.
T Consensus 2 ~~~g~t~L~~--a~~~~~~~~~~~ll~~g~~----~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--------- 65 (239)
T 1ycs_B 2 EITGQVSLPP--GKRTNLRKTGSERIAHGMR----VKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSL--------- 65 (239)
T ss_dssp ------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCC---------
T ss_pred CccccccCch--hhhhhhHHHHHHHhccCCC----ccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCC---------
Confidence 3579999999 9999999999998885433 333 36789999999999999999999999987776
Q ss_pred hhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCC
Q 027562 111 RTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPN 190 (222)
Q Consensus 111 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~ 190 (222)
.+..|.||||+|+..|+.+++++|++.|++ .+..|..|+||||+|+..++.+++++|+++|++++..+..
T Consensus 66 ---------~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 135 (239)
T 1ycs_B 66 ---------PNDEGITALHNAVCAGHTEIVKFLVQFGVN-VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYS 135 (239)
T ss_dssp ---------CCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSS
T ss_pred ---------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCC
Confidence 788999999999999999999999999999 6788999999999999999999999999999999999988
Q ss_pred Cc-cHHHHH--HHhccchhHHHHHhcCCccccc
Q 027562 191 GK-TALHAA--AMKSYFGKFSYTLSVGISILIS 220 (222)
Q Consensus 191 g~-t~l~~a--~~~~~~~~~~~Ll~~ga~~~~~ 220 (222)
|. ||+|+| +..|+.+++++|+++|+++++.
T Consensus 136 ~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~ 168 (239)
T 1ycs_B 136 DMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIM 168 (239)
T ss_dssp SCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTT
T ss_pred CCcchHHHHHHhhhccHHHHHHHHHhhhccccc
Confidence 77 999999 7889999999999999998864
No 72
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=4.1e-32 Score=183.30 Aligned_cols=150 Identities=26% Similarity=0.265 Sum_probs=138.6
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAA 81 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~ 81 (222)
+++|+.|+..|+.+++++|++.|.+.+ .+..|.||||+ |+..|+.+++++|++ .+..++..+..|.||||.|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~--A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~ 75 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHL--AAQYGHFSTTEVLLR----AGVSRDARTKVDRTPLHMAA 75 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHH--HHHHTCHHHHHHHHT----TTCCTTCCCTTCCCHHHHHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHH--HHHcCCHHHHHHHHH----cCCCCCCCCCCCCCHHHHHH
Confidence 589999999999999999999988664 57789999999 999999999998886 45667888999999999999
Q ss_pred HhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCH
Q 027562 82 KFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTP 161 (222)
Q Consensus 82 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 161 (222)
..|+.+++++|+++|++++. .+..|.||+|+|+..|+.+++++|++.|++ ++..+..|.||
T Consensus 76 ~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~ 136 (153)
T 1awc_B 76 SEGHANIVEVLLKHGADVNA------------------KDMLKMTALHWATEHNHQEVVELLIKYGAD-VHTQSKFCKTA 136 (153)
T ss_dssp HHTCHHHHHHHHTTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred HcChHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCH
Confidence 99999999999999988776 788999999999999999999999999999 66889999999
Q ss_pred HHHHHHcCCHHHHHHH
Q 027562 162 LYMAADYRSSDMVLAL 177 (222)
Q Consensus 162 l~~a~~~~~~~~~~~L 177 (222)
+++|+..++.+++++|
T Consensus 137 l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 137 FDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHTTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHh
Confidence 9999999999999987
No 73
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=1.6e-32 Score=190.01 Aligned_cols=165 Identities=19% Similarity=0.145 Sum_probs=151.1
Q ss_pred ChHHHHHHHcCCchhHHHHHHH-HHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIARE-VIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVA 80 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a 80 (222)
.++|+.|+..|+.+++++|++. +.+.+..+..|.||||+ |+..|+.+++++|++ .+..++..+..|.||||+|
T Consensus 6 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~--A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A 79 (179)
T 3f6q_A 6 MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHW--ACREGRSAVVEMLIM----RGARINVMNRGDDTPLHLA 79 (179)
T ss_dssp -CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHH--HHHTTCHHHHHHHHH----TTCCTTCCCTTCCCHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHH--HHHcCcHHHHHHHHH----cCCCCCCcCCCCCCHHHHH
Confidence 4789999999999999999997 55567888999999999 999999999999887 3567888899999999999
Q ss_pred HHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCC
Q 027562 81 AKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKT 160 (222)
Q Consensus 81 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 160 (222)
+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.|++ .+..|..|.|
T Consensus 80 ~~~~~~~~v~~Ll~~g~~~~~------------------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t 140 (179)
T 3f6q_A 80 ASHGHRDIVQKLLQYKADINA------------------VNEHGNVPLHYACFWGQDQVAEDLVANGAL-VSICNKYGEM 140 (179)
T ss_dssp HHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-SSBCCTTSCC
T ss_pred HHcCCHHHHHHHHHcCCCCCc------------------cCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cchhccCCCC
Confidence 999999999999999998776 789999999999999999999999999999 6788999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccCCCCC
Q 027562 161 PLYMAADYRSSDMVLALLENSTSASHEGPNG 191 (222)
Q Consensus 161 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g 191 (222)
|+++|+..++.+++++|+++|++++..+..+
T Consensus 141 pl~~A~~~~~~~~~~~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 141 PVDKAKAPLRELLRERAEKMGQNLNRIPYKD 171 (179)
T ss_dssp GGGGSCHHHHHHHHHHHHHTTCCCSCBCCCC
T ss_pred cHHHHHHHHHHHHHHHHHHhhcCcccCCccc
Confidence 9999999999999999999999998876544
No 74
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=1.7e-35 Score=212.47 Aligned_cols=179 Identities=18% Similarity=0.121 Sum_probs=134.0
Q ss_pred hHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHH
Q 027562 3 PNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAK 82 (222)
Q Consensus 3 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~ 82 (222)
||||.|+..|+.+++++|++.|.+++..+..|.||||+ |+..|+.+++++|++ .+..++..|..|+||||+|+.
T Consensus 23 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~--A~~~g~~~~v~~Ll~----~ga~~n~~d~~g~tpLh~A~~ 96 (229)
T 2vge_A 23 VLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHN--AICGANYSIVDFLIT----AGANVNSPDSHGWTPLHCAAS 96 (229)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHH--HHHTTCHHHHHHHHH----TTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHH--HHHcCCHHHHHHHHH----CCCCCCCCCCCCCCHHHHHHH
Confidence 57788888888888888888777777777778888888 777788777777776 355667777788888888888
Q ss_pred hCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhcc-ccCchHhHHH--HhcCChHHHHHHHhcCCCCCCCCCCCCC
Q 027562 83 FGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTN-KEKNTALHEA--VCHQNVDVVEILTKEDPDYPYSANNDGK 159 (222)
Q Consensus 83 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~a--~~~~~~~~~~~Ll~~~~~~~~~~~~~g~ 159 (222)
.|+.+++++|++.|++++. .+ ..|.||||+| +..|+.+++++|++.|++ .+..+..+.
T Consensus 97 ~g~~~~v~~Ll~~ga~~~~------------------~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~-~~~~~~~~~ 157 (229)
T 2vge_A 97 CNDTVICMALVQHGAAIFA------------------TTLSDGATAFEKCDPYREGYADCATYLADVEQS-MGLMNSGAV 157 (229)
T ss_dssp TTCHHHHHHHHTTTCCTTC------------------CCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHH-TTTSGGGEE
T ss_pred cCCHHHHHHHHHcCCCccc------------------ccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCC-cccccCCch
Confidence 8888888888887777665 33 5778888887 777888888888887777 556677777
Q ss_pred CHHHHHHHcCCHHHHHHHHhcCCC--CccCCCCCccHHHHHHHhccchhHHH
Q 027562 160 TPLYMAADYRSSDMVLALLENSTS--ASHEGPNGKTALHAAAMKSYFGKFSY 209 (222)
Q Consensus 160 t~l~~a~~~~~~~~~~~Ll~~g~~--~~~~~~~g~t~l~~a~~~~~~~~~~~ 209 (222)
+|++.++... ..++|++.|++ ++.+|..|+||||+|+..|+.++++.
T Consensus 158 ~~l~~~~~~~---~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~ 206 (229)
T 2vge_A 158 YALWDYSAEF---GDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPR 206 (229)
T ss_dssp EESSCBCCSS---TTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred HHHHHHhhcc---ccccCccccccccccccCCCcccHHHHHHHcCCcceeeh
Confidence 7776544333 23566777777 56778888888888888888888765
No 75
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.97 E-value=2.8e-31 Score=179.80 Aligned_cols=135 Identities=18% Similarity=0.082 Sum_probs=115.5
Q ss_pred cccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhc
Q 027562 67 LQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKE 146 (222)
Q Consensus 67 ~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~ 146 (222)
...+..|.||||.|+..|+.+++++|++.|++++. .+..|.||||+|+ .|+.+++++|++.
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~-~~~~~~v~~Ll~~ 66 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNA------------------PNSYGRRPIQVMM-MGSARVAELLLLH 66 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTC------------------CCSSSCCTTTSSC-TTCHHHHHHHHTT
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHH-cCCHHHHHHHHHc
Confidence 44577899999999999999999999999888776 7889999999985 8999999999999
Q ss_pred CCCCCCCCCCCCCC-HHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCcccccc
Q 027562 147 DPDYPYSANNDGKT-PLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILISF 221 (222)
Q Consensus 147 ~~~~~~~~~~~g~t-~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~ 221 (222)
|++ .+..+..|+| |||+|+..++.+++++|+++|++++.++..|+||||+|+..++.+++++|+++|++++..+
T Consensus 67 g~~-~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~ 141 (156)
T 1bi7_B 67 GAE-PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSN 141 (156)
T ss_dssp TCC-CCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-------
T ss_pred CCC-CCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccC
Confidence 988 6688899998 9999999999999999999999999999999999999999999999999999999998764
No 76
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=8e-32 Score=184.09 Aligned_cols=155 Identities=25% Similarity=0.378 Sum_probs=139.3
Q ss_pred ChHHHHHHHcCCchhHHHHHHH-HHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIARE-VIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVA 80 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a 80 (222)
+|+|+.|+..|+.+++++|++. +.+.+..+..|.||||+ |+..|+.+++++|++ .+..++..+..|.||||+|
T Consensus 9 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~--A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A 82 (165)
T 3twr_A 9 DRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHF--AAGYNRVSVVEYLLQ----HGADVHAKDKGGLVPLHNA 82 (165)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHH--HHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHH
T ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHH--HHHcChHHHHHHHHh----cCCCCCccCCCCCCHHHHH
Confidence 4799999999999999999984 44445677789999999 999999999999987 4567888999999999999
Q ss_pred HHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCC
Q 027562 81 AKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKT 160 (222)
Q Consensus 81 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 160 (222)
+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.|++ ++..|..|.|
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t 143 (165)
T 3twr_A 83 CSYGHYEVAELLVKHGAVVNV------------------ADLWKFTPLHEAAAKGKYEICKLLLQHGAD-PTKKNRDGNT 143 (165)
T ss_dssp HHTTCHHHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred HHcCcHHHHHHHHhCCCCCCC------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCC
Confidence 999999999999999988776 788999999999999999999999999999 6788999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCC
Q 027562 161 PLYMAADYRSSDMVLALLENST 182 (222)
Q Consensus 161 ~l~~a~~~~~~~~~~~Ll~~g~ 182 (222)
|+++|.. ++.+++++|+++|+
T Consensus 144 ~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 144 PLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp TGGGSCT-TCHHHHHHHHTC--
T ss_pred hhHhHhc-CChHHHHHHhhccc
Confidence 9999776 89999999999886
No 77
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.97 E-value=4.3e-30 Score=167.60 Aligned_cols=126 Identities=32% Similarity=0.489 Sum_probs=120.3
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCC
Q 027562 72 KGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYP 151 (222)
Q Consensus 72 ~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~ 151 (222)
+|+||||.|+..|+.+++++|+++|.+++. .+..|.||||+|+..++.+++++|++.|++ +
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~ 61 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNA------------------KDKNGRTPLHLAARNGHLEVVKLLLEAGAD-V 61 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTC------------------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-T
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCC------------------cCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-C
Confidence 489999999999999999999999988766 788999999999999999999999999998 6
Q ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCc
Q 027562 152 YSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGIS 216 (222)
Q Consensus 152 ~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~ 216 (222)
+..+..|.||||+|+..++.+++++|+++|++++.++..|.|||++|+..++.+++++|+++|||
T Consensus 62 ~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred cccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 68889999999999999999999999999999999999999999999999999999999999996
No 78
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=2e-30 Score=191.25 Aligned_cols=169 Identities=17% Similarity=0.166 Sum_probs=152.4
Q ss_pred hhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhh-hhhhhhhHhhh
Q 027562 30 TAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAK-LLQHENEELES 108 (222)
Q Consensus 30 ~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~-~~~~~~~~~~~ 108 (222)
.+....+++|. ++..+..+.++.++..+.. ..++..|..|.||||+|+..|+.+++++|++.|+ +++.
T Consensus 72 ~~~~~~~~l~~--a~~~~~~~~~~~l~~~~~~--~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~------- 140 (276)
T 4hbd_A 72 LRLACRSDAHP--ELVRRHLVTFRAMSARLLD--YVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDK------- 140 (276)
T ss_dssp HHHHHSTTCCH--HHHHHHHHHHHHHCHHHHH--HHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTC-------
T ss_pred HHHHhccCCCH--HHHHHHHHHHHHHHHHHHh--hcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCC-------
Confidence 34567889999 8889999888888776443 2367889999999999999999999999999997 6665
Q ss_pred hhhhHHHHhhhccccCchHhHHHH-----hcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q 027562 109 GIRTARHMIRMTNKEKNTALHEAV-----CHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTS 183 (222)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~l~~a~-----~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~ 183 (222)
.+..|.||+|+|+ ..++.+++++|++.|.. +...+..|+||||+|+..++.+++++|+++|++
T Consensus 141 -----------~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad 208 (276)
T 4hbd_A 141 -----------QNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNI-NAKASQAGQTALMLAVSHGRVDVVKALLACEAD 208 (276)
T ss_dssp -----------CCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred -----------CCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC
Confidence 7899999999999 66889999999999987 667788999999999999999999999999999
Q ss_pred CccCCCCCccHHHHHHHhccchhHHHHHh-cCCcccccc
Q 027562 184 ASHEGPNGKTALHAAAMKSYFGKFSYTLS-VGISILISF 221 (222)
Q Consensus 184 ~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~-~ga~~~~~~ 221 (222)
++.+|..|+||||+|+..|+.+++++|++ +|+++++.+
T Consensus 209 ~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d 247 (276)
T 4hbd_A 209 VNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTD 247 (276)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCC
T ss_pred CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcC
Confidence 99999999999999999999999999999 999999875
No 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=5.7e-33 Score=200.80 Aligned_cols=187 Identities=14% Similarity=0.032 Sum_probs=134.5
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAA 81 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~ 81 (222)
.||||.|+..|+.+.++.|++.|.+++.. ..|.||||. |+..|+.++++.|++ .+..++..|..|.||||+|+
T Consensus 6 ~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~--A~~~g~~~~v~~Ll~----~g~~~~~~d~~g~t~L~~A~ 78 (239)
T 1ycs_B 6 QVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLD--SSLEGEFDLVQRIIY----EVDDPSLPNDEGITALHNAV 78 (239)
T ss_dssp --------------------------------CHHHHHH--HHHHTCHHHHHHHTS----TTSSCCCCCTTSCCHHHHHH
T ss_pred cccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHH--HHHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHH
Confidence 48999999999999999999999998765 589999999 999999999988876 45578889999999999999
Q ss_pred HhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCC-C
Q 027562 82 KFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGK-T 160 (222)
Q Consensus 82 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~-t 160 (222)
..|+.+++++|+++|++++. .|..|.||||+|+..|+.+++++|++.|++ .+..+..|. |
T Consensus 79 ~~g~~~~v~~Ll~~ga~~~~------------------~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~~~t 139 (239)
T 1ycs_B 79 CAGHTEIVKFLVQFGVNVNA------------------ADSDGWTPLHCAASCNNVQVCKFLVESGAA-VFAMTYSDMQT 139 (239)
T ss_dssp HHTCHHHHHHHHHHTCCTTC------------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCSSSCCC
T ss_pred HcCCHHHHHHHHHcCCCCCc------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-cceecCCCCcc
Confidence 99999999999999998776 789999999999999999999999999999 556666665 9
Q ss_pred HHHHH--HHcCCHHHHHHHHhcCCCCccC---------CCCCccHHHHHHHhccchhHHHHHhcCCc
Q 027562 161 PLYMA--ADYRSSDMVLALLENSTSASHE---------GPNGKTALHAAAMKSYFGKFSYTLSVGIS 216 (222)
Q Consensus 161 ~l~~a--~~~~~~~~~~~Ll~~g~~~~~~---------~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~ 216 (222)
|+|+| +..++.+++++|+++|++++.. +..+.++.+++...|. +++.|.+.+.+
T Consensus 140 ~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~--~i~vl~~~~~~ 204 (239)
T 1ycs_B 140 AADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD--CMTIIHREDED 204 (239)
T ss_dssp HHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC--EEEECCCCTTS
T ss_pred hHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC--EEEEEEecCCC
Confidence 99999 7889999999999999988765 5567888888877765 45555555544
No 80
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=3.2e-30 Score=174.52 Aligned_cols=152 Identities=24% Similarity=0.249 Sum_probs=137.1
Q ss_pred ChHHHHHHHcCCchhHHHHHHH-HHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIARE-VIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVA 80 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a 80 (222)
+|+|+.|+..|+.+.+++|++. +.+++..+..|.||||+ + ..|+.+++++|++ .+..++..+..|.||||.|
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~--~-~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A 75 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV--M-MFGSTAIALELLK----QGASPNVQDTSGTSPVHDA 75 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH--S-CTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHH
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH--H-HcCCHHHHHHHHH----CCCCCCCcCCCCCCHHHHH
Confidence 4899999999999999999998 22677888899999999 4 3588888888887 4667888999999999999
Q ss_pred HHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCC
Q 027562 81 AKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKT 160 (222)
Q Consensus 81 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 160 (222)
+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++. ++ .+..|..|.|
T Consensus 76 ~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~-~~~~~~~g~t 135 (156)
T 1bd8_A 76 ARTGFLDTLKVLVEHGADVNV------------------PDGTGALPIHLAVQEGHTAVVSFLAAE-SD-LHRRDARGLT 135 (156)
T ss_dssp HHTTCHHHHHHHHHTTCCSCC------------------CCTTSCCHHHHHHHHTCHHHHHHHHTT-SC-TTCCCTTSCC
T ss_pred HHcCcHHHHHHHHHcCCCCCC------------------cCCCCCcHHHHHHHhChHHHHHHHHhc-cC-CCCcCCCCCC
Confidence 999999999999999988776 788999999999999999999999998 76 6688999999
Q ss_pred HHHHHHHcCCHHHHHHHHhc
Q 027562 161 PLYMAADYRSSDMVLALLEN 180 (222)
Q Consensus 161 ~l~~a~~~~~~~~~~~Ll~~ 180 (222)
|||+|+..++.+++++|+++
T Consensus 136 ~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 136 PLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHHHcCcHHHHHHHHhh
Confidence 99999999999999999874
No 81
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.97 E-value=9.4e-30 Score=168.36 Aligned_cols=127 Identities=23% Similarity=0.235 Sum_probs=118.7
Q ss_pred cccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCC
Q 027562 69 VNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDP 148 (222)
Q Consensus 69 ~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~ 148 (222)
....+.||||.|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++.|+
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 71 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNA------------------KDEYGLTPLYLATAHGHLEIVEVLLKNGA 71 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 455789999999999999999999999988776 78899999999999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcC
Q 027562 149 DYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVG 214 (222)
Q Consensus 149 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 214 (222)
+ .+..|..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|
T Consensus 72 ~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 72 D-VNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp C-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred C-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 8 6688999999999999999999999999999999999999999999999999999999999987
No 82
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.2e-32 Score=197.55 Aligned_cols=176 Identities=16% Similarity=0.055 Sum_probs=133.1
Q ss_pred HHHHHHHHHHHH---hhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHH
Q 027562 17 FKDIAREVIKRL---LTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLV 93 (222)
Q Consensus 17 v~~ll~~~~~~~---~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll 93 (222)
++.|++.|.+++ ..+.+|.||||+ |+..|+.+++++|++. +..++..|..|.||||+|+..|+.+++++|+
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~--A~~~g~~~~v~~Ll~~----g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll 74 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLD--AALTGELEVVQQAVKE----MNDPSQPNEEGITALHNAICGANYSIVDFLI 74 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHH--HHHHTCHHHHHHHHHH----SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CeehhccCCCCccccccccchhHHHHH--HHHcCCHHHHHHHHhc----CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 456777777765 345567778888 8888888888888773 4456778888999999999999999999999
Q ss_pred HhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHH--HHcCCH
Q 027562 94 ERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMA--ADYRSS 171 (222)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a--~~~~~~ 171 (222)
+.|++++. .+..|.||||+|+..|+.+++++|++.|+++....+..|+||||+| +..++.
T Consensus 75 ~~ga~~n~------------------~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~ 136 (229)
T 2vge_A 75 TAGANVNS------------------PDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYA 136 (229)
T ss_dssp HTTCCTTC------------------CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHH
T ss_pred HCCCCCCC------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChH
Confidence 88887766 6788899999999999999999999888884433346888999998 888888
Q ss_pred HHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCcccc
Q 027562 172 DMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILI 219 (222)
Q Consensus 172 ~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~ 219 (222)
+++++|+++|++++..+..|.||++.++.. ...++|+++|+++++
T Consensus 137 ~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~---~~~~~ll~~ga~~~~ 181 (229)
T 2vge_A 137 DCATYLADVEQSMGLMNSGAVYALWDYSAE---FGDELSFREGESVTV 181 (229)
T ss_dssp HHHHHHHHHHHHTTTSGGGEEEESSCBCCS---STTBCCBCTTCEEEE
T ss_pred HHHHHHHHcCCCcccccCCchHHHHHHhhc---cccccCccccccccc
Confidence 999999999988888888888888765533 344678888888543
No 83
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.96 E-value=6.8e-31 Score=182.41 Aligned_cols=161 Identities=10% Similarity=-0.018 Sum_probs=137.7
Q ss_pred cCCCchhHHhhhcccccccHHHHHHHHHhCCccccccc-cCCChHHHHHHHhCCH----HHHHHHHHhhhhhhhhhhHhh
Q 027562 33 TKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVN-AKGETPLHVAAKFGHS----DIVRVLVERAKLLQHENEELE 107 (222)
Q Consensus 33 ~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~t~L~~a~~~~~~----~~~~~Ll~~~~~~~~~~~~~~ 107 (222)
.++++|+. |++.|+.+.++.++. .. .+..+ ..|+||||+|+..|+. +++++|++.|++++.
T Consensus 5 ~~~~~l~~--Aa~~g~~~~~~~l~~---~~---~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~------ 70 (186)
T 3t8k_A 5 SEYRTVSA--AAMLGTYEDFLELFE---KG---YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKS------ 70 (186)
T ss_dssp HHCSSHHH--HHHHSCHHHHHHHHH---HS---SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSC------
T ss_pred ccccHHHH--HHHcCCHHHHHHHHh---cC---cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCC------
Confidence 46789999 899999877665554 22 23344 6799999999999875 489999999998887
Q ss_pred hhhhhHHHHhhhccccCchHhHHHHhcCC------hHHHHHHHhcCCCCCCCCCCCCC-CHHHHHHHcCC-----HHHHH
Q 027562 108 SGIRTARHMIRMTNKEKNTALHEAVCHQN------VDVVEILTKEDPDYPYSANNDGK-TPLYMAADYRS-----SDMVL 175 (222)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~------~~~~~~Ll~~~~~~~~~~~~~g~-t~l~~a~~~~~-----~~~~~ 175 (222)
++..|+||||+|+..+. .+++++|++.|++ ++.+|..|+ ||||+|+..+. .++++
T Consensus 71 ------------~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~ 137 (186)
T 3t8k_A 71 ------------RTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGAD-ITALYKPYKIVVFKNIFNYFVDENEMIPLYK 137 (186)
T ss_dssp ------------CCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCC-SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHH
T ss_pred ------------CCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCC-CCccCCCcCchHHHHHHHcCCChhhHHHHHH
Confidence 78999999999998876 5789999999999 778899999 99999998543 56999
Q ss_pred HHHh-cCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCccccc
Q 027562 176 ALLE-NSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILIS 220 (222)
Q Consensus 176 ~Ll~-~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~ 220 (222)
+|++ +|++++.+|..|+||||+|+..++.+++++|+++..+.+++
T Consensus 138 ~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~ 183 (186)
T 3t8k_A 138 LIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLK 183 (186)
T ss_dssp HHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCC
T ss_pred HHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhcc
Confidence 9999 99999999999999999999999999999999988776654
No 84
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=4.6e-31 Score=201.43 Aligned_cols=183 Identities=14% Similarity=0.057 Sum_probs=146.1
Q ss_pred HHHHHHH-cCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHH
Q 027562 4 NLFKAAA-AGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAK 82 (222)
Q Consensus 4 ~l~~A~~-~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~ 82 (222)
+++.|.. .++.+.++++++.|. ++.||||+ |+..|+.+++++|++.... ....+..+..|.||||.|+.
T Consensus 68 ~~~~a~~~~~~~~~~~~l~~~g~-------~~~T~Lh~--Aa~~G~~e~v~~Ll~~ga~-~~~~~~~~~~~~tpL~~Aa~ 137 (376)
T 2aja_A 68 CLYYAHYNRNAKQLWSDAHKKGI-------KSEVICFV--AAITGCSSALDTLCLLLTS-DEIVKVIQAENYQAFRLAAE 137 (376)
T ss_dssp HHHHHHTTTTCTTHHHHHHHHTC-------CHHHHHHH--HHHHCCHHHHHHHTTC--C-CSSCC--CHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHcCC-------CcCCHHHH--HHHcCCHHHHHHHHHcCCc-HHHHHHhccCCCCHHHHHHH
Confidence 4555555 477888888877655 34599999 9999999999999874331 11122345678899999999
Q ss_pred hCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCC--CCCCCCC
Q 027562 83 FGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYS--ANNDGKT 160 (222)
Q Consensus 83 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~--~~~~g~t 160 (222)
.|+.+++++|+++|++... .+..+.. .||||+|+..|+.+++++|++.|++ .+. .|..|.|
T Consensus 138 ~G~~eiv~~Ll~~gad~~~---------------~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~-~~~~~~d~~g~T 200 (376)
T 2aja_A 138 NGHLHVLNRLCELAPTEIM---------------AMIQAEN-YHAFRLAAENGHLHVLNRLCELAPT-EATAMIQAENYY 200 (376)
T ss_dssp TTCHHHHHHHHHSCTTTHH---------------HHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGG-GHHHHHHHHHHH
T ss_pred cCCHHHHHHHHhCCCCccc---------------cccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCc-cchhccCCCCCC
Confidence 9999999999999965321 0112223 8999999999999999999999988 334 6778999
Q ss_pred HHHHHH-HcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCccccc
Q 027562 161 PLYMAA-DYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILIS 220 (222)
Q Consensus 161 ~l~~a~-~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~ 220 (222)
|||+|+ ..|+.+++++|++.|++ |.|||++|+..|+.+++++|+++|++++..
T Consensus 201 pL~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa~~g~~evv~lL~~~ga~~~~~ 254 (376)
T 2aja_A 201 AFRWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFEYGEKYVNPFIARHVNRLKEM 254 (376)
T ss_dssp HHHHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTTTTTTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHHHCCCHHHHHHHHhcCcccccc
Confidence 999999 99999999999998753 899999999999999999999999988654
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.96 E-value=2.6e-29 Score=174.43 Aligned_cols=160 Identities=11% Similarity=0.089 Sum_probs=136.4
Q ss_pred hHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccc----cHHHHHHHHHhCCccccccccCCChHHH
Q 027562 3 PNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENA----STKFVEEILEKCPLLLLQVNAKGETPLH 78 (222)
Q Consensus 3 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~t~L~ 78 (222)
++|+.|++.|+.+.++.++..+.+. ..+..|.||||+ |+..++.+ ++++|++ .+.+++.++..|+||||
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~~~-~~~~~g~T~Lh~--A~~~~~~~~~~~iv~~Ll~----~Gadvn~~d~~g~TpLh 80 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGYED-KESVLKSNILYD--VLRNNNDEARYKISMFLIN----KGADIKSRTKEGTTLFF 80 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSSSC-HHHHHTTTHHHH--HTTCSCHHHHHHHHHHHHH----TTCCSSCCCTTCCCTHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcCccc-ccccCCCCHHHH--HHHcCCcchHHHHHHHHHH----CCCCCCCCCCCCCcHHH
Confidence 5799999999999999999876432 334789999999 88888654 5555554 67889999999999999
Q ss_pred HHHHhCC------HHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCc-hHhHHHHhcC-----ChHHHHHHHh-
Q 027562 79 VAAKFGH------SDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKN-TALHEAVCHQ-----NVDVVEILTK- 145 (222)
Q Consensus 79 ~a~~~~~------~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~a~~~~-----~~~~~~~Ll~- 145 (222)
+|+..++ .+++++|+++|++++. +|..|. ||||+|+..+ ..+++++|++
T Consensus 81 ~a~~~~~~~~~~~~~iv~~Ll~~Gadin~------------------~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~ 142 (186)
T 3t8k_A 81 PLFQGGGNDITGTTELCKIFLEKGADITA------------------LYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQ 142 (186)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCCSSS------------------CBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTS
T ss_pred HHHHcCCcchhhHHHHHHHHHHCCCCCCc------------------cCCCcCchHHHHHHHcCCChhhHHHHHHHHHHh
Confidence 9999987 5789999999999887 789999 9999999854 3569999999
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCC
Q 027562 146 EDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEG 188 (222)
Q Consensus 146 ~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~ 188 (222)
.|++ ++..|..|+||||+|+..++.+++++|.++..+.+.++
T Consensus 143 ~gad-~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 143 SGLQ-LLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp TTCC-TTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC
T ss_pred cCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhccc
Confidence 9999 77999999999999999999999999998766655544
No 86
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=2.5e-29 Score=170.13 Aligned_cols=144 Identities=13% Similarity=0.150 Sum_probs=114.9
Q ss_pred hhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhh
Q 027562 29 LTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELES 108 (222)
Q Consensus 29 ~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 108 (222)
..+..|.||||+ |+..|+.+++++|++ .+..++..+..|+||||+|+ .|+.+++++|++.|++++.
T Consensus 7 ~~~~~~~t~L~~--A~~~g~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~------- 72 (156)
T 1bi7_B 7 SSMEPSADWLAT--AAARGRVEEVRALLE----AGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNC------- 72 (156)
T ss_dssp ---CCSTTHHHH--HHHHTCHHHHHHHHT----TTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC-------
T ss_pred CCCccchHHHHH--HHHcCCHHHHHHHHH----cCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCC-------
Confidence 467789999999 999999999999887 35678888999999999985 8999999999999988776
Q ss_pred hhhhHHHHhhhccccCch-HhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccC
Q 027562 109 GIRTARHMIRMTNKEKNT-ALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHE 187 (222)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~-~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~ 187 (222)
.+..|.| |||+|+..|+.+++++|++.|++ ++..|..|+||||+|+..++.+++++|+++|++++.+
T Consensus 73 -----------~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~ 140 (156)
T 1bi7_B 73 -----------ADPATLTRPVHDAAREGFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGS 140 (156)
T ss_dssp -----------CCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------
T ss_pred -----------cCCCCCcHHHHHHHHCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCcc
Confidence 7889999 99999999999999999999999 6788999999999999999999999999999999999
Q ss_pred CCCCccHHHHH
Q 027562 188 GPNGKTALHAA 198 (222)
Q Consensus 188 ~~~g~t~l~~a 198 (222)
+..|.||.+-+
T Consensus 141 ~~~g~t~~~~~ 151 (156)
T 1bi7_B 141 NHARIDAAEGP 151 (156)
T ss_dssp -----------
T ss_pred CcCcCcccccC
Confidence 99999998743
No 87
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.95 E-value=4.6e-29 Score=165.22 Aligned_cols=131 Identities=24% Similarity=0.208 Sum_probs=117.8
Q ss_pred ccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcC
Q 027562 68 QVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKED 147 (222)
Q Consensus 68 ~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~ 147 (222)
..|..|+||||.|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++.|
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 66 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNV------------------KDHAGWTPLHEACNHGHLKVVELLLQHK 66 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 5688999999999999999999999999988766 7889999999999999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCcc
Q 027562 148 PDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISI 217 (222)
Q Consensus 148 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~ 217 (222)
++ .+..|..|+||||+|+..++.+++++|+++|++++.+|..|.||+++|+..+..+++++|.+.+...
T Consensus 67 ~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s~ 135 (137)
T 3c5r_A 67 AL-VNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESSS 135 (137)
T ss_dssp CC-TTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-------
T ss_pred Cc-ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccCC
Confidence 98 6688999999999999999999999999999999999999999999999999999999988877653
No 88
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=1.9e-30 Score=198.06 Aligned_cols=186 Identities=13% Similarity=0.070 Sum_probs=142.0
Q ss_pred ChHHHHHHHcCCchhHHHHHHHHHHH---HhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHH
Q 027562 2 DPNLFKAAAAGNLEPFKDIAREVIKR---LLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLH 78 (222)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~---~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~ 78 (222)
+||||.|+..|+.++|++|++.|... ...+..|.||||+ |+..|+.+++++|++...+. ...+..+.. .||||
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~--Aa~~G~~eiv~~Ll~~gad~-~~~~i~~~~-~TpLh 168 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRL--AAENGHLHVLNRLCELAPTE-IMAMIQAEN-YHAFR 168 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHH--HHHTTCHHHHHHHHHSCTTT-HHHHHSHHH-HHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHH--HHHcCCHHHHHHHHhCCCCc-cccccCCCC-CCHHH
Confidence 48999999999999999999988721 1234467789999 99999999999998842100 001222223 99999
Q ss_pred HHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHH-hcCChHHHHHHHhcCCCCCCCCCCC
Q 027562 79 VAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAV-CHQNVDVVEILTKEDPDYPYSANND 157 (222)
Q Consensus 79 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~-~~~~~~~~~~Ll~~~~~~~~~~~~~ 157 (222)
.|+..|+.+++++|+++|++++. +..+..|.||||+|+ ..|+.+++++|++.|.+
T Consensus 169 ~Aa~~G~~eiv~~Ll~~ga~~~~----------------~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------- 224 (376)
T 2aja_A 169 LAAENGHLHVLNRLCELAPTEAT----------------AMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM-------- 224 (376)
T ss_dssp HHHHTTCHHHHHHHHHSCGGGHH----------------HHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH--------
T ss_pred HHHHCCCHHHHHHHHHcCCccch----------------hccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc--------
Confidence 99999999999999999987653 013566889999999 99999999999986532
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhcCCCCc----------------------------------------------------
Q 027562 158 GKTPLYMAADYRSSDMVLALLENSTSAS---------------------------------------------------- 185 (222)
Q Consensus 158 g~t~l~~a~~~~~~~~~~~Ll~~g~~~~---------------------------------------------------- 185 (222)
|.||++.|+..|+.+++++|+++|++++
T Consensus 225 ~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~ 304 (376)
T 2aja_A 225 LAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIP 304 (376)
T ss_dssp HHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTST
T ss_pred cchHHHHHHHCCCHHHHHHHHhcCcccccccHHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhCh
Confidence 6788999988888888888887664321
Q ss_pred ---------cCCCCCccHHHHHHHhccchhHHHHHhcCC
Q 027562 186 ---------HEGPNGKTALHAAAMKSYFGKFSYTLSVGI 215 (222)
Q Consensus 186 ---------~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga 215 (222)
.....+.|||++|+..|+.+++++|+++|.
T Consensus 305 ~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~~ 343 (376)
T 2aja_A 305 GIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPS 343 (376)
T ss_dssp TTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSHH
T ss_pred hhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcChH
Confidence 112345689999999999999999999874
No 89
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.95 E-value=2.1e-28 Score=174.92 Aligned_cols=136 Identities=23% Similarity=0.171 Sum_probs=116.1
Q ss_pred cccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhc
Q 027562 67 LQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKE 146 (222)
Q Consensus 67 ~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~ 146 (222)
+..+..|.||||.|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++.
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 128 (222)
T 3ehr_A 67 AEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNG------------------LDKAGSTALYWACHGGHKDIVEMLFTQ 128 (222)
T ss_dssp HHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHTTS
T ss_pred cccccccccccccccccCcHHHHHHHHhCCCCccc------------------cCCCCCCHHHHHHHcCCHHHHHHHHcC
Confidence 34567889999999999999999999999988776 788999999999999999999999998
Q ss_pred -CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCcccccc
Q 027562 147 -DPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILISF 221 (222)
Q Consensus 147 -~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~ 221 (222)
|.+ .+..|..|+||||+|+..++.+++++|+++|++++.++..|.|||++|+..++.++++.|+++|++.++.+
T Consensus 129 ~g~~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~ 203 (222)
T 3ehr_A 129 PNIE-LNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSN 203 (222)
T ss_dssp TTCC-CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-------------
T ss_pred CCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccc
Confidence 877 67889999999999999999999999999999999999999999999999999999999999999987653
No 90
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=6.5e-29 Score=164.31 Aligned_cols=131 Identities=13% Similarity=0.164 Sum_probs=119.1
Q ss_pred HHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHh
Q 027562 27 RLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEEL 106 (222)
Q Consensus 27 ~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 106 (222)
.+..+..|.||||+ |+..|+.+++++|++. +..++..+..|+||||+|+. |+.+++++|+++|++++.
T Consensus 5 ~~~~~~~g~t~L~~--A~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~----- 72 (136)
T 1d9s_A 5 IHMLGGSSDAGLAT--AAARGQVETVRQLLEA----GADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNC----- 72 (136)
T ss_dssp CSCCCCCCSCHHHH--HHHTTCHHHHHHHHHT----TCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSC-----
T ss_pred ccCCCCCCccHHHH--HHHcCCHHHHHHHHHc----CCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCC-----
Confidence 34567789999999 9999999999998873 56678889999999999999 999999999999988776
Q ss_pred hhhhhhHHHHhhhcccc-CchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q 027562 107 ESGIRTARHMIRMTNKE-KNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTS 183 (222)
Q Consensus 107 ~~~~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~ 183 (222)
.+.. |.||||+|+..|+.+++++|++.|++ ++..|..|+||||+|+..++.+++++|+++|++
T Consensus 73 -------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 73 -------------ADPATLTRPVHDAAREGFLDTLVVLHRAGAR-LDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp -------------CBTTTTBCHHHHHHHHTCHHHHHHHHHTCCC-CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred -------------cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 7888 99999999999999999999999999 668899999999999999999999999999875
No 91
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.94 E-value=1.1e-26 Score=151.37 Aligned_cols=126 Identities=29% Similarity=0.422 Sum_probs=114.9
Q ss_pred cCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhh
Q 027562 33 TKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRT 112 (222)
Q Consensus 33 ~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 112 (222)
+|.||||+ |+..|+.+++++|++. +..++..+..|.||||.|+..++.+++++|++.|.+++.
T Consensus 1 ~g~t~L~~--A~~~~~~~~v~~Ll~~----~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~----------- 63 (126)
T 1n0r_A 1 NGRTPLHL--AARNGHLEVVKLLLEA----GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA----------- 63 (126)
T ss_dssp CCCCHHHH--HHHHTCHHHHHHHHHH----TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-----------
T ss_pred CCccHHHH--HHHcCcHHHHHHHHHc----CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcc-----------
Confidence 48999999 9999999999998874 455677889999999999999999999999999988766
Q ss_pred HHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q 027562 113 ARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTS 183 (222)
Q Consensus 113 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~ 183 (222)
.+..|.||+|+|+..++.+++++|++.|++ .+..+..|.||+++|+..++.+++++|+++|++
T Consensus 64 -------~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 64 -------KDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp -------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred -------cCCCCCcHHHHHHHcChHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 788999999999999999999999999998 668899999999999999999999999999985
No 92
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.94 E-value=4.6e-27 Score=152.70 Aligned_cols=118 Identities=22% Similarity=0.237 Sum_probs=106.2
Q ss_pred ccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCC
Q 027562 70 NAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPD 149 (222)
Q Consensus 70 ~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~ 149 (222)
+..|.||||.|+..|+.+++++|++.|.+++. .+..|.||||+|+..|+.+++++|++.|++
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 65 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNR------------------TLEGGRKPLHYAADCGQLEILEFLLLKGAD 65 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTS------------------CCTTSSCHHHHHHHTTCHHHHHHHHTTTCC
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCc------------------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 56789999999999999999999999988766 788999999999999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchh
Q 027562 150 YPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGK 206 (222)
Q Consensus 150 ~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~ 206 (222)
++..|..|+||||+|+..++.+++++|+++|++++.++..|.||+++|...+..++
T Consensus 66 -~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 66 -INAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp -TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHH
T ss_pred -CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHH
Confidence 66889999999999999999999999999999999999999999999965444333
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.94 E-value=1.3e-28 Score=178.36 Aligned_cols=163 Identities=18% Similarity=0.135 Sum_probs=125.5
Q ss_pred HHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHH
Q 027562 8 AAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSD 87 (222)
Q Consensus 8 A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~ 87 (222)
++..|+.+.+..+...+.+ .+..|.||||+ |+..|+.++++.|++ +..++..|..|.||||+|+..|+.+
T Consensus 22 ~~~~g~~~~~~~~~~~~~~---~~~~g~t~L~~--A~~~g~~~~v~~Ll~-----~~~~~~~d~~g~t~L~~A~~~g~~~ 91 (244)
T 3ui2_A 22 EWKDGHSPSWVPSSYIAAD---VVSEYETPWWT--AARKADEQALSQLLE-----DRDVDAVDENGRTALLFVAGLGSDK 91 (244)
T ss_dssp EESSCCCCEEEEGGGSCHH---HHHHHHHHHHH--HHTTTCHHHHHHTTT-----TCCTTCBCTTSCBHHHHHHHHTCHH
T ss_pred HHHcCCCcccccccccccc---cccCCCCHHHH--HHHcCCHHHHHHHHc-----CCCCCCcCCCCCCHHHHHHHCCCHH
Confidence 3444555555444443333 33578888988 888888888877766 3457778888889999999888888
Q ss_pred HHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhcc-ccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHH
Q 027562 88 IVRVLVERAKLLQHENEELESGIRTARHMIRMTN-KEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAA 166 (222)
Q Consensus 88 ~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~ 166 (222)
++++|+++|++++. .+ ..|.||||+|+..|+.+++++|++.|++ ++..|..|+||||+|+
T Consensus 92 ~v~~Ll~~ga~~~~------------------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~ 152 (244)
T 3ui2_A 92 CVRLLAEAGADLDH------------------RDMRGGLTALHMAAGYVRPEVVEALVELGAD-IEVEDERGLTALELAR 152 (244)
T ss_dssp HHHHHHHTTCCTTC------------------CCSSSCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHH
T ss_pred HHHHHHHcCCCCCc------------------CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHH
Confidence 89999888888766 45 7788899999888888999999888888 6678888889998887
Q ss_pred HcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCc
Q 027562 167 DYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGIS 216 (222)
Q Consensus 167 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~ 216 (222)
..+. ...+.|||++|+..|+.+++++|++++.+
T Consensus 153 ~~~~-----------------~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 153 EILK-----------------TTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp HHHT-----------------TCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred HHHh-----------------ccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 5221 24578899999999999999999998665
No 94
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=1.3e-26 Score=153.19 Aligned_cols=127 Identities=20% Similarity=0.241 Sum_probs=114.3
Q ss_pred hhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhh
Q 027562 30 TAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESG 109 (222)
Q Consensus 30 ~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 109 (222)
....+.||||+ |+..|+.+++++|++ .+..++..|..|.||||+|+..|+.+++++|++.|++++.
T Consensus 10 ~~~~~~t~l~~--A~~~g~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-------- 75 (136)
T 2jab_A 10 HGSDLGKKLLE--AARAGQDDEVRILMA----NGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNA-------- 75 (136)
T ss_dssp --CHHHHHHHH--HHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC--------
T ss_pred ccccccHHHHH--HHHhCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc--------
Confidence 45678899999 999999999999887 3566788899999999999999999999999999988776
Q ss_pred hhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Q 027562 110 IRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENS 181 (222)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 181 (222)
.+..|.||||+|+..|+.+++++|++.|++ .+..|..|+||||+|+..++.+++++|+++|
T Consensus 76 ----------~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 76 ----------VDAIGFTPLHLAAFIGHLEIAEVLLKHGAD-VNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp ----------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred ----------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 788999999999999999999999999998 6688999999999999999999999999876
No 95
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.94 E-value=5.4e-27 Score=162.74 Aligned_cols=129 Identities=25% Similarity=0.217 Sum_probs=114.1
Q ss_pred ccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCC
Q 027562 70 NAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPD 149 (222)
Q Consensus 70 ~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~ 149 (222)
+..|.||||.|+..|+.++++.|++ |.+++. .+..|.||||+|+..|+.+++++|++.|++
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~------------------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 101 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDA------------------VDENGRTALLFVAGLGSDKCVRLLAEAGAD 101 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTC------------------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCC------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 5578999999999999999999999 777665 788999999999999999999999999999
Q ss_pred CCCCCC-CCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCccc
Q 027562 150 YPYSAN-NDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISIL 218 (222)
Q Consensus 150 ~~~~~~-~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~ 218 (222)
.+..+ ..|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..++.+..+.++..+++..
T Consensus 102 -~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~~l~~a~~~~ 170 (183)
T 3deo_A 102 -LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIG 170 (183)
T ss_dssp -TTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHTCCCCSHHHHHHHHH
T ss_pred -CCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccCcccccHHHHHHHcC
Confidence 44555 889999999999999999999999999999999999999999998877777666666665543
No 96
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=1.8e-26 Score=160.04 Aligned_cols=141 Identities=20% Similarity=0.174 Sum_probs=125.7
Q ss_pred hhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhh
Q 027562 30 TAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESG 109 (222)
Q Consensus 30 ~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 109 (222)
.+..|.||||+ |+..|+.++++.+++ +..++..|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 40 ~~~~g~t~L~~--A~~~g~~~~v~~Ll~-----~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-------- 104 (183)
T 3deo_A 40 VVSEYETPWWT--AARKADEQALSQLLE-----DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH-------- 104 (183)
T ss_dssp HHHHHHHHHHH--HHHTTCHHHHHHHTT-----TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC--------
T ss_pred CCCCCCCHHHH--HHHcCCHHHHHHHHh-----cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc--------
Confidence 45689999999 999999998888876 456788999999999999999999999999999998876
Q ss_pred hhhHHHHhhhcc-ccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCC
Q 027562 110 IRTARHMIRMTN-KEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEG 188 (222)
Q Consensus 110 ~~~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~ 188 (222)
.+ ..|.||||+|+..|+.+++++|++.|++ ++..|..|+||||+|+..++.
T Consensus 105 ----------~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~----------------- 156 (183)
T 3deo_A 105 ----------RDMRGGLTALHMAAGYVRPEVVEALVELGAD-IEVEDERGLTALELAREILKT----------------- 156 (183)
T ss_dssp ----------CCSSSSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHHHT-----------------
T ss_pred ----------CCCCCCCCHHHHHHhcCcHHHHHHHHHcCCC-CcCCCCCCCCHHHHHHHhccC-----------------
Confidence 55 8899999999999999999999999999 668899999999999874321
Q ss_pred CCCccHHHHHHHhccchhHHHHHhc
Q 027562 189 PNGKTALHAAAMKSYFGKFSYTLSV 213 (222)
Q Consensus 189 ~~g~t~l~~a~~~~~~~~~~~Ll~~ 213 (222)
..+.+|+++|+..|+.+++++|.++
T Consensus 157 ~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 157 TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred cccccHHHHHHHcCHHHHHHHHHHh
Confidence 3568899999999999999999876
No 97
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.93 E-value=1.5e-25 Score=138.28 Aligned_cols=93 Identities=29% Similarity=0.410 Sum_probs=88.6
Q ss_pred cCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhc
Q 027562 123 EKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKS 202 (222)
Q Consensus 123 ~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~ 202 (222)
.|.||||+|+..|+.+++++|++.|++ ++..|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 478999999999999999999999999 6788999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHhcCCc
Q 027562 203 YFGKFSYTLSVGIS 216 (222)
Q Consensus 203 ~~~~~~~Ll~~ga~ 216 (222)
+.+++++|+++||+
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999999986
No 98
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.93 E-value=1.5e-25 Score=177.84 Aligned_cols=135 Identities=18% Similarity=0.076 Sum_probs=118.0
Q ss_pred CChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHh---cCChHHHHHHHhcCCC
Q 027562 73 GETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVC---HQNVDVVEILTKEDPD 149 (222)
Q Consensus 73 ~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~---~~~~~~~~~Ll~~~~~ 149 (222)
..+.||.|+..|+.+.++.|++.|++++.... ....+..|.||||+|+. .|+.+++++|++.|++
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~------------~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~ 199 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLP------------GPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH 199 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBC------------CSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCC------------CcccccccchHHHHHHHhcccccHHHHHHHHHcCCC
Confidence 34779999999999999999999998775200 00127789999999976 8999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCccccc
Q 027562 150 YPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILIS 220 (222)
Q Consensus 150 ~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~ 220 (222)
++..|..|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++||+++.+
T Consensus 200 -vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 200 -LDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAF 269 (497)
T ss_dssp -TTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred -CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCC
Confidence 7788999999999999999999999999999999999999999999999999999999999999999874
No 99
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=1e-26 Score=153.92 Aligned_cols=134 Identities=25% Similarity=0.333 Sum_probs=114.6
Q ss_pred HHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhh
Q 027562 24 VIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHEN 103 (222)
Q Consensus 24 ~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~ 103 (222)
|.|+ ..+..|.||||+ |+..|+.+++++|++ .+..++..+..|.||||+|+..|+.+++++|+++|++++.
T Consensus 1 G~d~-~~~~~g~t~L~~--A~~~~~~~~~~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-- 71 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHI--ASIKGDIPSVEYLLQ----NGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT-- 71 (137)
T ss_dssp ---C-CCCTTCCCHHHH--HHHHTCHHHHHHHHH----TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--
T ss_pred CCCC-CcCCCCCCHHHH--HHHcCCHHHHHHHHH----cCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC--
Confidence 4555 678899999999 999999999999887 4566788899999999999999999999999999988776
Q ss_pred hHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q 027562 104 EELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTS 183 (222)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~ 183 (222)
.+..|.||||+|+..|+.+++++|++.|++ .+..|..|.||+++|+..+..+++++|.+.+.+
T Consensus 72 ----------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 72 ----------------TGYQNDSPLHDAAKNGHVDIVKLLLSYGAS-RNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp ----------------CCGGGCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred ----------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 788999999999999999999999999999 678899999999999988888888877765543
No 100
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.92 E-value=7.5e-25 Score=161.35 Aligned_cols=133 Identities=17% Similarity=0.060 Sum_probs=119.4
Q ss_pred CChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhc---CChHHHHHHHhcCCC
Q 027562 73 GETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCH---QNVDVVEILTKEDPD 149 (222)
Q Consensus 73 ~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~---~~~~~~~~Ll~~~~~ 149 (222)
..++|+.|+..|+.+.++.+++.|.+++.. ..++..+..|.||||+|+.. |+.+++++|++.|++
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~------------~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~ 197 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEK------------IPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN 197 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSB------------CCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhh------------ccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC
Confidence 356899999999999999999998875431 00223578899999999998 899999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCccc
Q 027562 150 YPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISIL 218 (222)
Q Consensus 150 ~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~ 218 (222)
++..|..|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++..
T Consensus 198 -in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 198 -LDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRF 265 (278)
T ss_dssp -TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred -ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 67889999999999999999999999999999999999999999999999999999999999999754
No 101
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=1.3e-24 Score=161.85 Aligned_cols=135 Identities=18% Similarity=0.074 Sum_probs=119.4
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhc---CChHHHHHHHhcCC
Q 027562 72 KGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCH---QNVDVVEILTKEDP 148 (222)
Q Consensus 72 ~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~---~~~~~~~~Ll~~~~ 148 (222)
...++|+.|+..|+.+.++.|++.|++++.... ....+..|.||||+|+.. ++.+++++|++.|+
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~------------~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~ga 217 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLP------------GPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG 217 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEE------------CSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSS
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCC------------CcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCC
Confidence 345789999999999999999999987664100 001377899999999987 89999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCcccc
Q 027562 149 DYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGISILI 219 (222)
Q Consensus 149 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~ 219 (222)
+ ++..|..|+||||+|+..++.+++++|+++|++++.+|..|.|||++|+..++.+++++|+++|++...
T Consensus 218 d-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~g~ 287 (301)
T 2b0o_E 218 H-LDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA 287 (301)
T ss_dssp C-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHTTS
T ss_pred C-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCC
Confidence 9 668899999999999999999999999999999999999999999999999999999999999998643
No 102
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=2.8e-26 Score=166.10 Aligned_cols=152 Identities=22% Similarity=0.170 Sum_probs=124.4
Q ss_pred cCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhh
Q 027562 33 TKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRT 112 (222)
Q Consensus 33 ~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 112 (222)
.+.+++.+ ++..|+.+.+..+... ....+..|.||||.|++.|+.++++.|++ |.+++.
T Consensus 14 ~~~~~~l~--~~~~g~~~~~~~~~~~-------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~----------- 72 (244)
T 3ui2_A 14 EGAMEYLI--EWKDGHSPSWVPSSYI-------AADVVSEYETPWWTAARKADEQALSQLLE-DRDVDA----------- 72 (244)
T ss_dssp TTEEEEEE--EESSCCCCEEEEGGGS-------CHHHHHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTC-----------
T ss_pred CCccHHHH--HHHcCCCccccccccc-------ccccccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCC-----------
Confidence 45556666 6677776655333221 12234578999999999999999999999 877666
Q ss_pred HHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCC
Q 027562 113 ARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSAN-NDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNG 191 (222)
Q Consensus 113 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g 191 (222)
.+..|.||||+|+..|+.+++++|++.|++ ++..+ ..|+||||+|+..++.+++++|+++|++++.++..|
T Consensus 73 -------~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g 144 (244)
T 3ui2_A 73 -------VDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERG 144 (244)
T ss_dssp -------BCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred -------cCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Confidence 789999999999999999999999999999 44555 889999999999999999999999999999999999
Q ss_pred ccHHHHHHHhccchhHHHHHhc
Q 027562 192 KTALHAAAMKSYFGKFSYTLSV 213 (222)
Q Consensus 192 ~t~l~~a~~~~~~~~~~~Ll~~ 213 (222)
.||||+|+..+........+..
T Consensus 145 ~t~l~~A~~~~~~~~~~~~l~~ 166 (244)
T 3ui2_A 145 LTALELAREILKTTPKGNPMQF 166 (244)
T ss_dssp CCHHHHHHHHHTTCCCSSHHHH
T ss_pred CcHHHHHHHHHhccCCCCHHHH
Confidence 9999999987665544444443
No 103
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=2.8e-25 Score=165.39 Aligned_cols=139 Identities=20% Similarity=0.107 Sum_probs=117.2
Q ss_pred CCchhHHhhhcccccccHHHHHHHHHhCCccccc------cccCCChHHHHHHHh---CCHHHHHHHHHhhhhhhhhhhH
Q 027562 35 NTILHVNIRSKESENASTKFVEEILEKCPLLLLQ------VNAKGETPLHVAAKF---GHSDIVRVLVERAKLLQHENEE 105 (222)
Q Consensus 35 ~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~------~~~~~~t~L~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~ 105 (222)
.++|+. |+..|+.+.++.+++ .+..++. .+..|.||||+|+.. |+.+++++|+++|++++.
T Consensus 152 ~~~L~~--A~~~g~~~~v~~ll~----~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~---- 221 (301)
T 2b0o_E 152 PQRLWT--AICNRDLLSVLEAFA----NGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA---- 221 (301)
T ss_dssp HHHHHH--HHHTTCHHHHHHHHH----TTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTC----
T ss_pred HHHHhh--hhhccCHHHHHHHHh----cCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCC----
Confidence 356999 999999888887765 3444554 588999999999997 899999999999998776
Q ss_pred hhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCc
Q 027562 106 LESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSAS 185 (222)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~ 185 (222)
.|..|.||||+|+..|+.+++++|++.|++ ++..|..|.||||+|+..++.+++++|+++|++
T Consensus 222 --------------~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-- 284 (301)
T 2b0o_E 222 --------------KAADGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAG-- 284 (301)
T ss_dssp --------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH--
T ss_pred --------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC--
Confidence 789999999999999999999999999999 678999999999999999999999999999987
Q ss_pred cCCCCCccHHHHHHHhccc
Q 027562 186 HEGPNGKTALHAAAMKSYF 204 (222)
Q Consensus 186 ~~~~~g~t~l~~a~~~~~~ 204 (222)
.|.||||+|+..|+.
T Consensus 285 ----~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 285 ----TFAFPLHVDYSWVIS 299 (301)
T ss_dssp ----TTSSCCC--------
T ss_pred ----CCCChhHHHHhcCCc
Confidence 578999999988763
No 104
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.92 E-value=1.5e-24 Score=165.01 Aligned_cols=127 Identities=13% Similarity=0.140 Sum_probs=116.8
Q ss_pred cCCChHHHHHHHh-CCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhcc--ccCchHhHHHHhcCChHHHHHHHhcC
Q 027562 71 AKGETPLHVAAKF-GHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTN--KEKNTALHEAVCHQNVDVVEILTKED 147 (222)
Q Consensus 71 ~~~~t~L~~a~~~-~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~a~~~~~~~~~~~Ll~~~ 147 (222)
..+.|+||.|+.. |+.++++.|++.|++++. .+ ..|.||||+|+..|+.+++++|++.|
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~------------------~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~G 258 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADVNW------------------VNGGQDNATPLIQATAANSLLACEFLLQNG 258 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTC------------------CCTTTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCCCc------------------cccccCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 3566899999999 999999999999998876 45 78999999999999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCc
Q 027562 148 PDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGIS 216 (222)
Q Consensus 148 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~ 216 (222)
++ ++..|..|+||||+|+..++.+++++|+++|++++..|..|.||||+|+..++.+++++|+.+|..
T Consensus 259 ad-vn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 259 AN-VNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp CC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred CC-CCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 99 668899999999999999999999999999999999999999999999999999999999988754
No 105
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.91 E-value=1.7e-25 Score=159.80 Aligned_cols=138 Identities=21% Similarity=0.212 Sum_probs=112.7
Q ss_pred hhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCHHHHHHHHHh-hhhhhhhhhHhh
Q 027562 29 LTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHSDIVRVLVER-AKLLQHENEELE 107 (222)
Q Consensus 29 ~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~ 107 (222)
..+..|.||||+ |+..|+.++++.|++ .+..++..+..|.||||+|+..|+.+++++|++. |++++.
T Consensus 68 ~~~~~g~t~L~~--A~~~g~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~------ 135 (222)
T 3ehr_A 68 EQAESIDNPLHE--AAKRGNLSWLRECLD----NRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQ------ 135 (222)
T ss_dssp HHEEEESCHHHH--HHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCC------
T ss_pred cccccccccccc--ccccCcHHHHHHHHh----CCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccc------
Confidence 467789999999 999999999999887 4566888899999999999999999999999998 887766
Q ss_pred hhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccC
Q 027562 108 SGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHE 187 (222)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~ 187 (222)
.+..|.||||+|+..|+.+++++|++.|++ .+..|..|.|||++|+..+..++++.|++.|+.....
T Consensus 136 ------------~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~ 202 (222)
T 3ehr_A 136 ------------QNKLGDTALHAAAWKGYADIVQLLLAKGAR-TDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLS 202 (222)
T ss_dssp ------------CCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-SCCCCTTSCCHHHHCCSHHHHHHHC------------
T ss_pred ------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CccccCCCCCHHHHhcchhHHHHHHHHhccchhhhcc
Confidence 789999999999999999999999999999 6788999999999999999999999999999988877
Q ss_pred CCCC
Q 027562 188 GPNG 191 (222)
Q Consensus 188 ~~~g 191 (222)
+..+
T Consensus 203 ~~~~ 206 (222)
T 3ehr_A 203 NAED 206 (222)
T ss_dssp ----
T ss_pred chhh
Confidence 6554
No 106
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.91 E-value=9.7e-25 Score=139.99 Aligned_cols=102 Identities=24% Similarity=0.290 Sum_probs=97.5
Q ss_pred hccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHH
Q 027562 119 MTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAA 198 (222)
Q Consensus 119 ~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a 198 (222)
.+|..|.||||+|+..|+.+++++|++.|++ .+..|..|.||||+|+..++.+++++|+++|++++.++..|.||||+|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA 82 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 3788999999999999999999999999998 668899999999999999999999999999999999999999999999
Q ss_pred HHhccchhHHHHHhcCCcccccc
Q 027562 199 AMKSYFGKFSYTLSVGISILISF 221 (222)
Q Consensus 199 ~~~~~~~~~~~Ll~~ga~~~~~~ 221 (222)
+..++.+++++|+++|++++..+
T Consensus 83 ~~~~~~~~~~~Ll~~ga~~n~~~ 105 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAKGADVNARS 105 (115)
T ss_dssp HTTTCHHHHHHHHTTSSSHHHHS
T ss_pred HHCCCHHHHHHHHHcCCCCCcCC
Confidence 99999999999999999999764
No 107
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=7.6e-24 Score=137.43 Aligned_cols=101 Identities=18% Similarity=0.142 Sum_probs=93.5
Q ss_pred ccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHHH
Q 027562 120 TNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAAA 199 (222)
Q Consensus 120 ~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~ 199 (222)
.+..|.+|||+|+..|+.+++++|++.|.+ .+..+..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKGED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAV 81 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTTCC-TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCCC-cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 356788999999999999999999999998 6688999999999999999999999999999999999999999999999
Q ss_pred HhccchhHHHHHhcCCcccccc
Q 027562 200 MKSYFGKFSYTLSVGISILISF 221 (222)
Q Consensus 200 ~~~~~~~~~~Ll~~ga~~~~~~ 221 (222)
..++.+++++|+++|++++..+
T Consensus 82 ~~~~~~~v~~Ll~~ga~~~~~~ 103 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGADKTVKG 103 (123)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCC
T ss_pred HcCCHHHHHHHHHcCCCCCCcC
Confidence 9999999999999999998765
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.90 E-value=2.2e-23 Score=128.53 Aligned_cols=93 Identities=33% Similarity=0.531 Sum_probs=86.8
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCC
Q 027562 72 KGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYP 151 (222)
Q Consensus 72 ~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~ 151 (222)
+|+||||+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++.|++ +
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~------------------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~ 61 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNA------------------KDKNGRTPLHLAARNGHLEVVKLLLEAGAD-V 61 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-T
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcc------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-C
Confidence 489999999999999999999999988776 789999999999999999999999999999 6
Q ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q 027562 152 YSANNDGKTPLYMAADYRSSDMVLALLENSTS 183 (222)
Q Consensus 152 ~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~ 183 (222)
+..|..|+||||+|+..++.+++++|+++|++
T Consensus 62 ~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 68899999999999999999999999999975
No 109
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.90 E-value=6.3e-24 Score=136.19 Aligned_cols=109 Identities=26% Similarity=0.345 Sum_probs=100.3
Q ss_pred ccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcC
Q 027562 68 QVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKED 147 (222)
Q Consensus 68 ~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~ 147 (222)
.+|..|.||||.|+..|+.+++++|++.|++++. .+..|.||||+|+..++.+++++|++.|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------------------~d~~g~t~L~~A~~~~~~~~~~~Ll~~g 65 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNA------------------RSKDGNTPLHLAAKNGHAEIVKLLLAKG 65 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSC------------------CCSSSCCTTHHHHTTTCHHHHHHHTTTT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 4688999999999999999999999999988766 7889999999999999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHH
Q 027562 148 PDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTAL 195 (222)
Q Consensus 148 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l 195 (222)
++ .+..|..|+||||+|+..++.+++++|+++|++++.++..|.+|-
T Consensus 66 ~~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 66 AD-VNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp CC-TTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred CC-CcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 99 668899999999999999999999999999999999999999874
No 110
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.90 E-value=2.3e-23 Score=158.50 Aligned_cols=162 Identities=15% Similarity=0.103 Sum_probs=112.6
Q ss_pred cCCCchhHHhhhcc-cccccHHHHHHHHHhCCccccccc--cCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhh
Q 027562 33 TKNTILHVNIRSKE-SENASTKFVEEILEKCPLLLLQVN--AKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESG 109 (222)
Q Consensus 33 ~g~~~L~~~~a~~~-~~~~~~~~l~~~~~~~~~~~~~~~--~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 109 (222)
.+.|+||. |+.. ++.++++.|++ .+.+++..+ ..|.||||+|+..|+.+++++|+++|++++.
T Consensus 198 ~~~t~L~~--Aa~~~g~~~~v~~LL~----~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~-------- 263 (368)
T 3jue_A 198 HPGALLFR--ASGHPPSLPTMADALA----HGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQ-------- 263 (368)
T ss_dssp CHHHHHHH--HTSSSCCHHHHHHHHH----TTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC--------
T ss_pred CCCcHHHH--HHHccCCHHHHHHHHH----cCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC--------
Confidence 34579999 9888 99999988876 455677777 8899999999999999999999999998776
Q ss_pred hhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcC---CCCcc
Q 027562 110 IRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENS---TSASH 186 (222)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g---~~~~~ 186 (222)
.|..|.||||+|+..|+.+++++|++.|++ .+..|..|.||||+|+..++.+++++|++.+ ++...
T Consensus 264 ----------~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad-~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~ 332 (368)
T 3jue_A 264 ----------ADSAGRGPLHHATILGHTGLACLFLKRGAD-LGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQ 332 (368)
T ss_dssp ----------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-------
T ss_pred ----------CCCCCCCHHHHHHHcCcHHHHHHHHHCcCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccc
Confidence 789999999999999999999999999999 6788999999999999999999999999866 34445
Q ss_pred CCCCCccHHHHHHHhcc--chhHHHHHhcCCcccc
Q 027562 187 EGPNGKTALHAAAMKSY--FGKFSYTLSVGISILI 219 (222)
Q Consensus 187 ~~~~g~t~l~~a~~~~~--~~~~~~Ll~~ga~~~~ 219 (222)
.+..+.|+++.+..... .+-.+.|.+++.++++
T Consensus 333 ~~~~~~t~l~i~~~~~~~~~~~~ekl~r~~~~~~t 367 (368)
T 3jue_A 333 GQAGDETYLDIFRDFSLMASDDPEKLSRRSHDLHT 367 (368)
T ss_dssp -----------------------------------
T ss_pred cCCCCCCHHHHHHHHHhhcCCCHHHHHhcCCCcCc
Confidence 56678899888776543 3456778888887764
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.89 E-value=8.2e-23 Score=162.08 Aligned_cols=128 Identities=20% Similarity=0.104 Sum_probs=110.4
Q ss_pred CchhHHhhhcccccccHHHHHHHHHhCCcccccc------ccCCChHHHHHHH---hCCHHHHHHHHHhhhhhhhhhhHh
Q 027562 36 TILHVNIRSKESENASTKFVEEILEKCPLLLLQV------NAKGETPLHVAAK---FGHSDIVRVLVERAKLLQHENEEL 106 (222)
Q Consensus 36 ~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~~t~L~~a~~---~~~~~~~~~Ll~~~~~~~~~~~~~ 106 (222)
+.||. |+..|+.+.++.|++. +..++.. +..|.||||+||. .|+.+++++|+++|++++.
T Consensus 134 ~~L~~--A~~~g~~~~v~~ll~~----g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~----- 202 (497)
T 3lvq_E 134 QRLWT--AICNRDLLSVLEAFAN----GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA----- 202 (497)
T ss_dssp HHHHH--HHHHTCHHHHHHHHHT----TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTC-----
T ss_pred HHHHH--HHhccCHHHHHHHHhh----cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCc-----
Confidence 56999 9999999999888874 3445544 7889999999977 8999999999999998877
Q ss_pred hhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCcc
Q 027562 107 ESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASH 186 (222)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~ 186 (222)
.|..|.||||+|+..|+.+++++|++.|++ ++..|..|+||||+|+..++.+++++|+++|++++.
T Consensus 203 -------------~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 203 -------------KAADGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp -------------CCSSSCCHHHHHTTTTCHHHHHHHHHTCCC-CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred -------------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 789999999999999999999999999999 778899999999999999999999999999999887
Q ss_pred CC
Q 027562 187 EG 188 (222)
Q Consensus 187 ~~ 188 (222)
..
T Consensus 269 ~~ 270 (497)
T 3lvq_E 269 FP 270 (497)
T ss_dssp --
T ss_pred Cc
Confidence 43
No 112
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.87 E-value=4.8e-22 Score=146.37 Aligned_cols=130 Identities=21% Similarity=0.154 Sum_probs=111.3
Q ss_pred CCchhHHhhhcccccccHHHHHHHHHhCCcc--ccccccCCChHHHHHHHh---CCHHHHHHHHHhhhhhhhhhhHhhhh
Q 027562 35 NTILHVNIRSKESENASTKFVEEILEKCPLL--LLQVNAKGETPLHVAAKF---GHSDIVRVLVERAKLLQHENEELESG 109 (222)
Q Consensus 35 ~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~t~L~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~~~ 109 (222)
.++|+. |+..++.+.+..++......... ++..+..|.||||+|+.. |+.+++++|+++|++++.
T Consensus 131 l~~l~~--a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~-------- 200 (278)
T 1dcq_A 131 LHSLCE--AVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDK-------- 200 (278)
T ss_dssp HHHHHH--HHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTC--------
T ss_pred hhhhhh--HhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccc--------
Confidence 467888 88899988777666532211111 455588999999999999 899999999999998876
Q ss_pred hhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCc
Q 027562 110 IRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSAS 185 (222)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~ 185 (222)
+|..|.||||+|+..|+.+++++|++.|++ ++..|..|.||||+|+..++.+++++|+++|++..
T Consensus 201 ----------~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 201 ----------QTGKGSTALHYCCLTDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQALSGRF 265 (278)
T ss_dssp ----------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred ----------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 789999999999999999999999999999 77899999999999999999999999999988643
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.85 E-value=7.1e-21 Score=120.85 Aligned_cols=91 Identities=24% Similarity=0.231 Sum_probs=84.9
Q ss_pred hccccCchHhHHHHhcCChHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCccHHHHH
Q 027562 119 MTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNDGKTPLYMAADYRSSDMVLALLENSTSASHEGPNGKTALHAA 198 (222)
Q Consensus 119 ~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a 198 (222)
..+..|.|+||+|+..|+.+++++|++.|++ .+..|..|+||||+|+..++.+++++|+++|++++.++..|+||||+|
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGAD-VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 3678899999999999999999999999998 667899999999999999999999999999999999999999999999
Q ss_pred HHhccchhHHHH
Q 027562 199 AMKSYFGKFSYT 210 (222)
Q Consensus 199 ~~~~~~~~~~~L 210 (222)
+..++.+++++|
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 999999999987
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.81 E-value=1.3e-19 Score=114.98 Aligned_cols=93 Identities=25% Similarity=0.318 Sum_probs=83.2
Q ss_pred ccccccCCChHHHHHHHhCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHh
Q 027562 66 LLQVNAKGETPLHVAAKFGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTK 145 (222)
Q Consensus 66 ~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~ 145 (222)
....+..|.||||.|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~------------------~d~~g~tpLh~A~~~~~~~~v~~Ll~ 78 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAA------------------KDKNGSTPLHLAARNGHLEVVKLLLE 78 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCc------------------cCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 445678999999999999999999999999988776 78899999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Q 027562 146 EDPDYPYSANNDGKTPLYMAADYRSSDMVLAL 177 (222)
Q Consensus 146 ~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 177 (222)
.|++ .+..|..|+||||+|+..++.+++++|
T Consensus 79 ~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 79 AGAD-VXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp TTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred cCCC-ccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 9999 668899999999999999999999987
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=72.54 E-value=1.1 Score=21.23 Aligned_cols=17 Identities=24% Similarity=0.579 Sum_probs=9.8
Q ss_pred HHHHHHHcCCchhHHHH
Q 027562 4 NLFKAAAAGNLEPFKDI 20 (222)
Q Consensus 4 ~l~~A~~~g~~~~v~~l 20 (222)
.+..||..||.+.++.|
T Consensus 16 qiyvA~seGd~etv~~L 32 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKL 32 (40)
T ss_dssp HHHHHHTTSCHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHH
Confidence 35556666666665554
No 116
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=53.04 E-value=32 Score=27.19 Aligned_cols=89 Identities=10% Similarity=0.004 Sum_probs=45.5
Q ss_pred HhHHHHhcCChHHHHHHH----hcCCCCCCCCCCCCCCHHHHHHHcCCHH----HHHHHHhcCCCCccCCCCCccHHHHH
Q 027562 127 ALHEAVCHQNVDVVEILT----KEDPDYPYSANNDGKTPLYMAADYRSSD----MVLALLENSTSASHEGPNGKTALHAA 198 (222)
Q Consensus 127 ~l~~a~~~~~~~~~~~Ll----~~~~~~~~~~~~~g~t~l~~a~~~~~~~----~~~~Ll~~g~~~~~~~~~g~t~l~~a 198 (222)
.+...+..|+.+.+..++ +.|.. ++.. ..++.+...+..|..+ +++.+.+.|..++... -.+.+...
T Consensus 111 lI~~~~~~g~~~~A~~l~~~M~~~g~~-Pd~~--tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~t--y~~Li~~~ 185 (501)
T 4g26_A 111 GARLAVAKDDPEMAFDMVKQMKAFGIQ-PRLR--SYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPE--LAALLKVS 185 (501)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHTTCC-CCHH--HHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHH--HHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHcCCC-Cccc--eehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHH--HHHHHHHH
Confidence 345556667766444443 34443 2221 1223444456677753 4455556777776543 12344455
Q ss_pred HHhccchh----HHHHHhcCCccccc
Q 027562 199 AMKSYFGK----FSYTLSVGISILIS 220 (222)
Q Consensus 199 ~~~~~~~~----~~~Ll~~ga~~~~~ 220 (222)
++.|+.+- ++.+.+.|..|+..
T Consensus 186 ~~~g~~d~A~~ll~~Mr~~g~~ps~~ 211 (501)
T 4g26_A 186 MDTKNADKVYKTLQRLRDLVRQVSKS 211 (501)
T ss_dssp HHTTCHHHHHHHHHHHHHHTSSBCHH
T ss_pred hhCCCHHHHHHHHHHHHHhCCCcCHH
Confidence 66676643 34445556665543
No 117
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=47.52 E-value=60 Score=21.66 Aligned_cols=132 Identities=13% Similarity=0.111 Sum_probs=72.7
Q ss_pred hHHHHHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHH
Q 027562 3 PNLFKAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAK 82 (222)
Q Consensus 3 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~ 82 (222)
+-+-.|.+.|+++....+.+..-+ .......=.. |...|+.++++....... +-...+.+...
T Consensus 10 ~rF~LAL~lg~l~~A~e~a~~l~~----~~~Wk~Lg~~--AL~~gn~~lAe~cy~~~~-----------D~~~L~~Ly~~ 72 (177)
T 3mkq_B 10 IRFDLALEYGNLDAALDEAKKLND----SITWERLIQE--ALAQGNASLAEMIYQTQH-----------SFDKLSFLYLV 72 (177)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHCC----HHHHHHHHHH--HHHTTCHHHHHHHHHHTT-----------CHHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHhCC----HHHHHHHHHH--HHHcCChHHHHHHHHHhC-----------CHHHHHHHHHH
Confidence 446678888888877776653210 0111111123 666777777766655311 11223444555
Q ss_pred hCCHHHHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChH-HHHHHHhcCCCCCCCCCCCCCCH
Q 027562 83 FGHSDIVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVD-VVEILTKEDPDYPYSANNDGKTP 161 (222)
Q Consensus 83 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~-~~~~Ll~~~~~~~~~~~~~g~t~ 161 (222)
.|+.+-++.+.+... ........++.+...|+++ +++.|.+.|.- + -+
T Consensus 73 tg~~e~L~kla~iA~----------------------~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~-~--------eA 121 (177)
T 3mkq_B 73 TGDVNKLSKMQNIAQ----------------------TREDFGSMLLNTFYNNSTKERSSIFAEGGSL-P--------LA 121 (177)
T ss_dssp HTCHHHHHHHHHHHH----------------------HTTCHHHHHHHHHHHTCHHHHHHHHHHTTCH-H--------HH
T ss_pred hCCHHHHHHHHHHHH----------------------HCccHHHHHHHHHHcCCHHHHHHHHHHCCCh-H--------HH
Confidence 677666666544321 1223344566666667665 66667665532 1 25
Q ss_pred HHHHHHcCCHHHHHHHHh-cCC
Q 027562 162 LYMAADYRSSDMVLALLE-NST 182 (222)
Q Consensus 162 l~~a~~~~~~~~~~~Ll~-~g~ 182 (222)
...|..++..+..+.+++ .|.
T Consensus 122 ~~~A~t~g~~~~a~~~~~~~~~ 143 (177)
T 3mkq_B 122 YAVAKANGDEAAASAFLEQAEV 143 (177)
T ss_dssp HHHHHHTTCHHHHHHHHHHTTC
T ss_pred HHHHHHcCcHHHHHHHHHHhCC
Confidence 566777888888877764 443
No 118
>1vek_A UBP14, ubiquitin-specific protease 14, putative; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=35.70 E-value=13 Score=21.31 Aligned_cols=16 Identities=19% Similarity=-0.010 Sum_probs=9.2
Q ss_pred hhHHHHHhcCCccccc
Q 027562 205 GKFSYTLSVGISILIS 220 (222)
Q Consensus 205 ~~~~~Ll~~ga~~~~~ 220 (222)
..++||++|.-++++.
T Consensus 60 ~A~ewL~~h~~d~d~d 75 (84)
T 1vek_A 60 EAMNWLLSHMDDPDID 75 (84)
T ss_dssp HHHHHHHHHTTCSTTT
T ss_pred HHHHHHHhCCCccccc
Confidence 3466666666655543
No 119
>2crn_A Ubash3A protein; compact three-helix bundle, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=35.15 E-value=15 Score=19.86 Aligned_cols=14 Identities=0% Similarity=-0.095 Sum_probs=7.7
Q ss_pred hHHHHHhcCCcccc
Q 027562 206 KFSYTLSVGISILI 219 (222)
Q Consensus 206 ~~~~Ll~~ga~~~~ 219 (222)
.++||++|.-|+++
T Consensus 41 A~~wL~~h~~d~d~ 54 (64)
T 2crn_A 41 ALAWLHDHCNDPSL 54 (64)
T ss_dssp HHHHHHHHSSSTTS
T ss_pred HHHHHHhCCCCccc
Confidence 45566666555544
No 120
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=32.82 E-value=1.1e+02 Score=20.40 Aligned_cols=97 Identities=13% Similarity=0.047 Sum_probs=58.8
Q ss_pred HHHHcCCchhHHHHHHHHHHHHhhhhcCCCchhHHhhhcccccccHHHHHHHHHhCCccccccccCCChHHHHHHHhCCH
Q 027562 7 KAAAAGNLEPFKDIAREVIKRLLTAKTKNTILHVNIRSKESENASTKFVEEILEKCPLLLLQVNAKGETPLHVAAKFGHS 86 (222)
Q Consensus 7 ~A~~~g~~~~v~~ll~~~~~~~~~~~~g~~~L~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~ 86 (222)
.|...|++++++..+++.. |..+-..|+. ..|+.+-++.+.+.-. ..++-...++.+...|+.
T Consensus 43 ~AL~~gn~~lAe~cy~~~~-----D~~~L~~Ly~----~tg~~e~L~kla~iA~--------~~g~~n~af~~~l~lGdv 105 (177)
T 3mkq_B 43 EALAQGNASLAEMIYQTQH-----SFDKLSFLYL----VTGDVNKLSKMQNIAQ--------TREDFGSMLLNTFYNNST 105 (177)
T ss_dssp HHHHTTCHHHHHHHHHHTT-----CHHHHHHHHH----HHTCHHHHHHHHHHHH--------HTTCHHHHHHHHHHHTCH
T ss_pred HHHHcCChHHHHHHHHHhC-----CHHHHHHHHH----HhCCHHHHHHHHHHHH--------HCccHHHHHHHHHHcCCH
Confidence 5777888888888887633 3344445554 4566666665555322 223345567777778876
Q ss_pred H-HHHHHHHhhhhhhhhhhHhhhhhhhHHHHhhhccccCchHhHHHHhcCChHHHHHHHhc
Q 027562 87 D-IVRVLVERAKLLQHENEELESGIRTARHMIRMTNKEKNTALHEAVCHQNVDVVEILTKE 146 (222)
Q Consensus 87 ~-~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~ 146 (222)
+ +++.|.+.|... -+...|-.+|..++.+.+++.
T Consensus 106 ~~~i~lL~~~~r~~--------------------------eA~~~A~t~g~~~~a~~~~~~ 140 (177)
T 3mkq_B 106 KERSSIFAEGGSLP--------------------------LAYAVAKANGDEAAASAFLEQ 140 (177)
T ss_dssp HHHHHHHHHTTCHH--------------------------HHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHCCChH--------------------------HHHHHHHHcCcHHHHHHHHHH
Confidence 4 677776543211 135556677888888877753
No 121
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=31.66 E-value=64 Score=24.01 Aligned_cols=19 Identities=5% Similarity=0.036 Sum_probs=7.9
Q ss_pred CCCCCCHHHHHHHcCCHHH
Q 027562 155 NNDGKTPLYMAADYRSSDM 173 (222)
Q Consensus 155 ~~~g~t~l~~a~~~~~~~~ 173 (222)
|..|+..+..+...+..+.
T Consensus 214 d~~Gn~ViQ~~l~~~~~~~ 232 (351)
T 3gvo_A 214 DQYGNYVIQHVLEHGRPED 232 (351)
T ss_dssp STTHHHHHHHHHHHSCHHH
T ss_pred CchHHHHHHHHHHhCchhh
Confidence 3344444444444444333
No 122
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=31.27 E-value=1.5e+02 Score=22.97 Aligned_cols=47 Identities=19% Similarity=0.267 Sum_probs=30.9
Q ss_pred hcCChHHHHHHHhcCCCCCCCC-------------CCCCCCHHHHHHHcCCHHHHHHHHh
Q 027562 133 CHQNVDVVEILTKEDPDYPYSA-------------NNDGKTPLYMAADYRSSDMVLALLE 179 (222)
Q Consensus 133 ~~~~~~~~~~Ll~~~~~~~~~~-------------~~~g~t~l~~a~~~~~~~~~~~Ll~ 179 (222)
..|+...|+.-++.|.+..... -.-|.|..|.|+...+.+++..|+.
T Consensus 31 ~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 31 VEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 4588888888888887733221 1136677777777777666666664
No 123
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=30.84 E-value=43 Score=20.21 Aligned_cols=41 Identities=5% Similarity=-0.044 Sum_probs=24.6
Q ss_pred HHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCc
Q 027562 172 DMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGIS 216 (222)
Q Consensus 172 ~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~ 216 (222)
..+++|-+.|+++...+. ...|..++- +..+.++|.++|++
T Consensus 34 ~~~~~lk~~Gi~V~RyNL-~~~P~~F~~---N~~V~~~L~~~G~~ 74 (106)
T 3ktb_A 34 VVIESLKKQGIIVTRHNL-RDEPQVYVS---NKTVNDFLQKHGAD 74 (106)
T ss_dssp HHHHHHHHTTCCCEEEET-TTCTTHHHH---SHHHHHHHHTTCGG
T ss_pred HHHHHHHHCCCEEEEEcc-ccChHHHhc---CHHHHHHHHHcCcc
Confidence 346667777777766553 334555554 55666666666664
No 124
>2dag_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5 (USP 5), UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.81 E-value=25 Score=19.56 Aligned_cols=9 Identities=0% Similarity=-0.038 Sum_probs=4.2
Q ss_pred HHHHHHhcC
Q 027562 173 MVLALLENS 181 (222)
Q Consensus 173 ~~~~Ll~~g 181 (222)
.++||+++.
T Consensus 41 A~ewL~~~~ 49 (74)
T 2dag_A 41 AMNWVMSHM 49 (74)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHhCC
Confidence 345555443
No 125
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=26.87 E-value=42 Score=20.44 Aligned_cols=41 Identities=7% Similarity=-0.042 Sum_probs=25.5
Q ss_pred HHHHHHHhcCCCCccCCCCCccHHHHHHHhccchhHHHHHhcCCc
Q 027562 172 DMVLALLENSTSASHEGPNGKTALHAAAMKSYFGKFSYTLSVGIS 216 (222)
Q Consensus 172 ~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~ 216 (222)
..+++|-++|+++...+. ...|..++- +..+.++|.++|.+
T Consensus 31 ~~~~~lk~~Gi~V~RyNL-~~~P~aF~~---N~~V~~~L~~~G~~ 71 (110)
T 3kgk_A 31 TDVQWLKQSGVQIERFNL-AQQPMSFVQ---NEKVKAFIEASGAE 71 (110)
T ss_dssp HHHHHHHHHTCCEEEEET-TTCTTHHHH---SHHHHHHHHHHCGG
T ss_pred HHHHHHHHCCCeEEEEcc-ccChHHHhc---CHHHHHHHHHcCcc
Confidence 356777777777766653 344555554 56666777767764
No 126
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=24.90 E-value=2.1e+02 Score=22.20 Aligned_cols=49 Identities=12% Similarity=-0.053 Sum_probs=35.1
Q ss_pred HHcCCHHHHHHHHhcCCCCccC--------------CCCCccHHHHHHHhccchhHHHHHhcC
Q 027562 166 ADYRSSDMVLALLENSTSASHE--------------GPNGKTALHAAAMKSYFGKFSYTLSVG 214 (222)
Q Consensus 166 ~~~~~~~~~~~Ll~~g~~~~~~--------------~~~g~t~l~~a~~~~~~~~~~~Ll~~g 214 (222)
+..|....|+.-+..|.++..+ -.-|.|.+|+|++..+-+++..|+.-+
T Consensus 30 v~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~~ 92 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTEV 92 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhcc
Confidence 4456666666666666554433 225899999999999999999998743
No 127
>2dai_A Ubadc1, ubiquitin associated domain containing 1; UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.55 E-value=33 Score=19.65 Aligned_cols=43 Identities=12% Similarity=0.073 Sum_probs=19.8
Q ss_pred HHHHHHHHhcCCCCccCCCCCccHHHHHHHhccc-hhHHHHHhcCCcccc
Q 027562 171 SDMVLALLENSTSASHEGPNGKTALHAAAMKSYF-GKFSYTLSVGISILI 219 (222)
Q Consensus 171 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~-~~~~~Ll~~ga~~~~ 219 (222)
.+.++.|.+.|...... ..+|... .++. ..++||++|.-++++
T Consensus 30 e~~i~~L~~MGF~~~~a----~~AL~~t--~~nve~A~ewL~~~~~d~d~ 73 (83)
T 2dai_A 30 EAALRQLTEMGFPENRA----TKALQLN--HMSVPQAMEWLIEHAEDPTI 73 (83)
T ss_dssp HHHHHHHHHHTCCHHHH----HHHHHHT--TSCHHHHHHHHHHGGGCSTT
T ss_pred HHHHHHHHHcCCCHHHH----HHHHHHh--CCCHHHHHHHHHHCCCCccc
Confidence 44555666665443221 1233222 2223 346666666655544
No 128
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=23.21 E-value=41 Score=29.69 Aligned_cols=93 Identities=6% Similarity=-0.068 Sum_probs=57.3
Q ss_pred chHhHHHHhcCChHHHHHHHh-------cCCCCCCCCCCCCCCHHHHHHHcCCH----HHHHHHHhcCCCCccCCCCCcc
Q 027562 125 NTALHEAVCHQNVDVVEILTK-------EDPDYPYSANNDGKTPLYMAADYRSS----DMVLALLENSTSASHEGPNGKT 193 (222)
Q Consensus 125 ~~~l~~a~~~~~~~~~~~Ll~-------~~~~~~~~~~~~g~t~l~~a~~~~~~----~~~~~Ll~~g~~~~~~~~~g~t 193 (222)
++.+...|+.|.++-..-++. .|.. ++.. .-++.++--++.|.. ++++.+.+.|..+|.... .+
T Consensus 131 naLIdglcK~G~leeA~~Lf~eM~~m~~kG~~-Pdvv--TYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTY--nt 205 (1134)
T 3spa_A 131 LAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKL-LTLD--MYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSY--AA 205 (1134)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTT-CCHH--HHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH--HH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCC-CCHh--HHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHH--HH
Confidence 344566678888876666652 2333 2222 123555656777775 445555668888877542 33
Q ss_pred HHHHHHHhccc-----hhHHHHHhcCCccccccC
Q 027562 194 ALHAAAMKSYF-----GKFSYTLSVGISILISFY 222 (222)
Q Consensus 194 ~l~~a~~~~~~-----~~~~~Ll~~ga~~~~~~~ 222 (222)
.+.--++.|.. ++++-+.+.|..||..+|
T Consensus 206 LI~glcK~G~~~e~A~~Ll~EM~~kG~~PD~vtY 239 (1134)
T 3spa_A 206 ALQCMGRQDQDAGTIERCLEQMSQEGLKLQALFT 239 (1134)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHTCCSHHHHH
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHcCCCCChhhc
Confidence 44445666653 577888999999987654
Done!