Query 027563
Match_columns 222
No_of_seqs 73 out of 75
Neff 2.8
Searched_HMMs 13730
Date Mon Mar 25 20:01:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027563.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027563hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1t1ea2 d.58.3.2 (A:12-190) Pr 75.1 1.4 9.9E-05 33.9 4.1 34 144-177 72-108 (179)
2 d1ul7a_ d.129.6.1 (A:) Map/mic 58.6 6.5 0.00048 27.8 4.6 40 126-165 2-41 (102)
3 d1m8pa3 c.37.1.15 (A:391-573) 51.2 6.6 0.00048 26.3 3.5 26 135-161 154-179 (183)
4 d1x6va3 c.37.1.4 (A:34-228) Ad 42.3 11 0.0008 26.0 3.6 26 135-161 167-192 (195)
5 d2i9ia1 c.51.6.1 (A:51-271) Hy 35.6 10 0.00074 31.1 2.7 21 145-165 52-72 (221)
6 d1ejda_ d.68.2.2 (A:) UDP-N-ac 33.3 76 0.0055 25.7 8.0 43 150-192 192-244 (419)
7 d1g8fa3 c.37.1.15 (A:390-511) 31.0 15 0.0011 27.2 2.8 21 141-161 99-119 (122)
8 d2fgca2 d.58.18.6 (A:27-104) A 25.8 19 0.0014 24.5 2.4 21 145-165 13-33 (78)
9 d2a9pa1 c.23.1.1 (A:2-118) DNA 24.6 33 0.0024 23.0 3.6 28 133-165 2-29 (117)
10 d3lada2 c.3.1.5 (A:159-277) Di 23.8 97 0.0071 20.7 6.7 40 133-172 48-89 (119)
11 d1zq1a1 b.38.3.1 (A:2-75) Glut 23.8 19 0.0014 24.7 2.0 29 152-180 2-38 (74)
12 d1rz4a1 a.4.5.53 (A:132-216) E 23.4 21 0.0015 24.9 2.2 20 150-169 37-56 (85)
13 d1qlwa_ c.69.1.15 (A:) A novel 21.7 27 0.002 24.8 2.7 18 143-160 300-317 (318)
14 d1prtd_ b.40.2.1 (D:) Pertussi 20.8 46 0.0033 24.0 3.8 34 142-177 61-94 (110)
No 1
>d1t1ea2 d.58.3.2 (A:12-190) Pro-kumamolisin activation domain {Bacillus sp. MN-32 [TaxId: 198803]}
Probab=75.14 E-value=1.4 Score=33.86 Aligned_cols=34 Identities=15% Similarity=0.129 Sum_probs=28.7
Q ss_pred ChhHHHHHHHHHhhhcCeeeec---CCeEEEEEEeec
Q 027563 144 APNQVAGEIFSFFTRNNFVVTD---RGEVITFEGMMV 177 (222)
Q Consensus 144 p~~evl~~L~~yF~~R~Y~V~~---~~evITFEG~V~ 177 (222)
|.++-.+.+.+|++++|..+.. +++.|+|+|.|.
T Consensus 72 ps~~~~~~V~~wL~~~Gl~v~~~~~~~~~v~~~gtv~ 108 (179)
T d1t1ea2 72 ASLDDFAEIRKFAEAHGLTLDRAHVAAGTAVLSGPVD 108 (179)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEETTTTEEEEEEEHH
T ss_pred CCHHHHHHHHHHHHHcCCcceEEecCCCEEEEEeeHH
Confidence 5567788999999999998754 568999999875
No 2
>d1ul7a_ d.129.6.1 (A:) Map/microtubule affinity-regulating kinase 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=58.56 E-value=6.5 Score=27.84 Aligned_cols=40 Identities=18% Similarity=0.108 Sum_probs=33.9
Q ss_pred cccceeeeEEEeecCCCCChhHHHHHHHHHhhhcCeeeec
Q 027563 126 VKSKIVQKTFVGEGESKKAPNQVAGEIFSFFTRNNFVVTD 165 (222)
Q Consensus 126 ~KDRieqrT~vv~~~s~~p~~evl~~L~~yF~~R~Y~V~~ 165 (222)
+|-|.-+-|+-+...|.++|++++.+|..=++++|.+...
T Consensus 2 ~~~~~~rf~wsv~tTS~~~P~eIm~eI~rvL~~lgv~~~~ 41 (102)
T d1ul7a_ 2 SSGSSGRFTWSMKTTSSMDPSDMMREIRKVLGANNCDYEQ 41 (102)
T ss_dssp CCCCCCCCCCCCCCCBCSCHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCcceeeeeecCcCCCHHHHHHHHHHHHHHcCcEEEE
Confidence 4556666788888899999999999999999999988765
No 3
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=51.16 E-value=6.6 Score=26.31 Aligned_cols=26 Identities=23% Similarity=0.315 Sum_probs=22.3
Q ss_pred EEeecCCCCChhHHHHHHHHHhhhcCe
Q 027563 135 FVGEGESKKAPNQVAGEIFSFFTRNNF 161 (222)
Q Consensus 135 ~vv~~~s~~p~~evl~~L~~yF~~R~Y 161 (222)
++++. +.++++|++++|.++++++||
T Consensus 154 i~IDT-~~~s~~e~v~~I~~~L~~~g~ 179 (183)
T d1m8pa3 154 LVVDF-SKQSVRSIVHEIILVLESQGF 179 (183)
T ss_dssp EEECT-TTSCHHHHHHHHHHHHHHTTT
T ss_pred EEEEC-CCCCHHHHHHHHHHHHHHcCC
Confidence 45554 678999999999999999997
No 4
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.30 E-value=11 Score=26.00 Aligned_cols=26 Identities=8% Similarity=0.176 Sum_probs=21.8
Q ss_pred EEeecCCCCChhHHHHHHHHHhhhcCe
Q 027563 135 FVGEGESKKAPNQVAGEIFSFFTRNNF 161 (222)
Q Consensus 135 ~vv~~~s~~p~~evl~~L~~yF~~R~Y 161 (222)
++++. +.++++|++++|.+|++++|+
T Consensus 167 l~IdT-~~~s~ee~~~~Il~~l~~~~~ 192 (195)
T d1x6va3 167 LVLKT-DSCDVNDCVQQVVELLQERDI 192 (195)
T ss_dssp EEECT-TTSCHHHHHHHHHHHHHHTTS
T ss_pred EEEEC-CCCCHHHHHHHHHHHHHHCcC
Confidence 44554 678999999999999999987
No 5
>d2i9ia1 c.51.6.1 (A:51-271) Hypothetical protein HP0492 {Helicobacter pylori [TaxId: 210]}
Probab=35.58 E-value=10 Score=31.10 Aligned_cols=21 Identities=14% Similarity=0.390 Sum_probs=19.3
Q ss_pred hhHHHHHHHHHhhhcCeeeec
Q 027563 145 PNQVAGEIFSFFTRNNFVVTD 165 (222)
Q Consensus 145 ~~evl~~L~~yF~~R~Y~V~~ 165 (222)
.++++.||++.|++|||+|..
T Consensus 52 ~~~l~~qi~~ilek~GY~v~~ 72 (221)
T d2i9ia1 52 QDALINQIQTIFEKRGYQVLR 72 (221)
T ss_dssp HHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHhcCceEEe
Confidence 578999999999999999976
No 6
>d1ejda_ d.68.2.2 (A:) UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) {Enterobacter cloacae [TaxId: 550]}
Probab=33.31 E-value=76 Score=25.65 Aligned_cols=43 Identities=19% Similarity=0.309 Sum_probs=31.0
Q ss_pred HHHHHHhhhcCeeeecC-CeEEEEEE---------eecCchHHHHHHHHHHHH
Q 027563 150 GEIFSFFTRNNFVVTDR-GEVITFEG---------MMVPSRGQAAFLTFCTCI 192 (222)
Q Consensus 150 ~~L~~yF~~R~Y~V~~~-~evITFEG---------~V~pS~fLAiFLTfLaai 192 (222)
+...+++++-|.+|... +++++..| .|.+.+.-|+|+-.++++
T Consensus 192 ~~t~~~l~~~G~~i~~~~~~~~~i~g~~~~~~~~~~V~~D~ssAa~~~~aa~i 244 (419)
T d1ejda_ 192 VDTANFLVALGAKISGQGTDRITIEGVERLGGGVYRVLPDRIETGTFLVAAAI 244 (419)
T ss_dssp HHHHHHHHHTTCEEECTTSSEEEEECCSCBCCEEEECCBCHHHHHHHHHHHHT
T ss_pred hhHHHHhhhcceeeecCCceEEEEcccccccCCceeecChhhhhhhhhhhhcc
Confidence 34567889999999864 46566555 577888889888766654
No 7
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=31.05 E-value=15 Score=27.22 Aligned_cols=21 Identities=14% Similarity=0.428 Sum_probs=19.9
Q ss_pred CCCChhHHHHHHHHHhhhcCe
Q 027563 141 SKKAPNQVAGEIFSFFTRNNF 161 (222)
Q Consensus 141 s~~p~~evl~~L~~yF~~R~Y 161 (222)
+..++++.+++|.+|++++||
T Consensus 99 ~~~sVee~V~qII~yLee~Gf 119 (122)
T d1g8fa3 99 ADEPISHIVQKVVLFLEDNGF 119 (122)
T ss_dssp TTCCHHHHHHHHHHHHHHTTS
T ss_pred CCCCHHHHHHHHHHHHHHCcC
Confidence 778999999999999999998
No 8
>d2fgca2 d.58.18.6 (A:27-104) Acetolactate synthase small subunit, IlvH {Thermotoga maritima [TaxId: 2336]}
Probab=25.76 E-value=19 Score=24.54 Aligned_cols=21 Identities=19% Similarity=0.430 Sum_probs=19.0
Q ss_pred hhHHHHHHHHHhhhcCeeeec
Q 027563 145 PNQVAGEIFSFFTRNNFVVTD 165 (222)
Q Consensus 145 ~~evl~~L~~yF~~R~Y~V~~ 165 (222)
...++.++..-|.+|||.+.+
T Consensus 13 ~pGvL~Ri~~lF~rRg~NI~S 33 (78)
T d2fgca2 13 KPGVMRKVANLFARRGFNISS 33 (78)
T ss_dssp CTTHHHHHHHHHHTTTCEEEE
T ss_pred CCcHHHHHHHHHhhCCcceEE
Confidence 456999999999999999987
No 9
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=24.61 E-value=33 Score=23.03 Aligned_cols=28 Identities=14% Similarity=0.221 Sum_probs=22.2
Q ss_pred eEEEeecCCCCChhHHHHHHHHHhhhcCeeeec
Q 027563 133 KTFVGEGESKKAPNQVAGEIFSFFTRNNFVVTD 165 (222)
Q Consensus 133 rT~vv~~~s~~p~~evl~~L~~yF~~R~Y~V~~ 165 (222)
|-+++|. ...+.+.+..+|++.||+|..
T Consensus 2 rILiVdD-----d~~~~~~l~~~L~~~g~~v~~ 29 (117)
T d2a9pa1 2 KILIVDD-----EKPISDIIKFNMTKEGYEVVT 29 (117)
T ss_dssp EEEEECS-----CHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEEEC-----CHHHHHHHHHHHHHCCCEEEE
Confidence 4455654 467888999999999999976
No 10
>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}
Probab=23.84 E-value=97 Score=20.65 Aligned_cols=40 Identities=18% Similarity=0.109 Sum_probs=26.3
Q ss_pred eEEEeecC--CCCChhHHHHHHHHHhhhcCeeeecCCeEEEE
Q 027563 133 KTFVGEGE--SKKAPNQVAGEIFSFFTRNNFVVTDRGEVITF 172 (222)
Q Consensus 133 rT~vv~~~--s~~p~~evl~~L~~yF~~R~Y~V~~~~evITF 172 (222)
.|.+.... -+.-..++.+.++++|+++|.++.-+-++..+
T Consensus 48 Vtiv~~~~~ll~~~d~ei~~~l~~~l~~~Gv~i~~~~~v~~i 89 (119)
T d3lada2 48 VTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGT 89 (119)
T ss_dssp EEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCEEEEE
T ss_pred eEEEEeecccCCcccchhHHHHHHHHHhcCceeecCcEEEEE
Confidence 55554442 22334789999999999999877664433333
No 11
>d1zq1a1 b.38.3.1 (A:2-75) Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD {Pyrococcus abyssi [TaxId: 29292]}
Probab=23.83 E-value=19 Score=24.70 Aligned_cols=29 Identities=34% Similarity=0.658 Sum_probs=21.8
Q ss_pred HHHHhhhcCeeeec--------CCeEEEEEEeecCch
Q 027563 152 IFSFFTRNNFVVTD--------RGEVITFEGMMVPSR 180 (222)
Q Consensus 152 L~~yF~~R~Y~V~~--------~~evITFEG~V~pS~ 180 (222)
+.+|++++|..+-+ .++.++|||.+-|+.
T Consensus 2 ~~~fl~~~~~~~GD~Vri~~~~~~~~~~~eGilmP~~ 38 (74)
T d1zq1a1 2 VDEFLKERNINVGDFVRITKEEDGEEVTYEGYIMPPY 38 (74)
T ss_dssp HHHHHHHTTCCTTCEEEEEEESSSSEEECCEEECCCC
T ss_pred HHHHHHHcCCCCCCEEEEEEecCCCceEEEEEEcCCc
Confidence 46788888876655 336679999999873
No 12
>d1rz4a1 a.4.5.53 (A:132-216) Eukaryotic translation initiation factor 3 subunit 12, eIF3k, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.43 E-value=21 Score=24.89 Aligned_cols=20 Identities=5% Similarity=0.428 Sum_probs=14.7
Q ss_pred HHHHHHhhhcCeeeecCCeE
Q 027563 150 GEIFSFFTRNNFVVTDRGEV 169 (222)
Q Consensus 150 ~~L~~yF~~R~Y~V~~~~ev 169 (222)
.+|..|.++.||.+.++|.+
T Consensus 37 ~~L~~~i~~~gW~~~~~g~v 56 (85)
T d1rz4a1 37 SQLKVWMSKYGWSADESGQI 56 (85)
T ss_dssp HHHHHHHHHHTCEECC--CE
T ss_pred HHHHHHHHHcCCEEcCCCEE
Confidence 45778889999999987654
No 13
>d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]}
Probab=21.69 E-value=27 Score=24.77 Aligned_cols=18 Identities=33% Similarity=0.433 Sum_probs=15.7
Q ss_pred CChhHHHHHHHHHhhhcC
Q 027563 143 KAPNQVAGEIFSFFTRNN 160 (222)
Q Consensus 143 ~p~~evl~~L~~yF~~R~ 160 (222)
.+.+++++.|.+|+++|+
T Consensus 300 ~~~~~va~~i~~wL~~~~ 317 (318)
T d1qlwa_ 300 RNNLQVADLILDWIGRNT 317 (318)
T ss_dssp TTHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhcc
Confidence 456899999999999985
No 14
>d1prtd_ b.40.2.1 (D:) Pertussis toxin S4 subunit {Bordetella pertussis [TaxId: 520]}
Probab=20.84 E-value=46 Score=23.99 Aligned_cols=34 Identities=15% Similarity=0.166 Sum_probs=24.6
Q ss_pred CCChhHHHHHHHHHhhhcCeeeecCCeEEEEEEeec
Q 027563 142 KKAPNQVAGEIFSFFTRNNFVVTDRGEVITFEGMMV 177 (222)
Q Consensus 142 ~~p~~evl~~L~~yF~~R~Y~V~~~~evITFEG~V~ 177 (222)
.-|.+-+++. -|+++|-.|.--+-+++||||.-+
T Consensus 61 sspmevmlra--vfmqqrplrmflgpkqltfegkpa 94 (110)
T d1prtd_ 61 SSPMEVMLRA--VFMQQRPLRMFLGPKQLTFEGKPA 94 (110)
T ss_dssp CCHHHHHHHH--HHHHTCEEEEEEEEEEEEETTEEE
T ss_pred CChHHHHHHH--HHHhhcchhhhcCcceeeecCchH
Confidence 3334444444 378999999888889999999743
Done!