BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>027567
MSLRCRRLSSRVSCVFLALCMFLNSLPGLVLAAVVTLDSIKIYKTHEWLDNKPTVYFKCQ
GENKKILPDVKEKNTTYVFKGEESWQPLTEFLGTKCKRCGLYEEDTFNSDDVFDEWEFCP
GDFADNDGKYIRKTKKEFDATFLCPKCKSGRTESDTHVGRKGMHVAIIVLISLLASIVTA
IVLVAAYKYWQKKKRQQDQARFLKLFEDGDEIEDELGLGTVI

High Scoring Gene Products

Symbol, full name Information P value
AT3G53490 protein from Arabidopsis thaliana 6.5e-51
AT5G02720 protein from Arabidopsis thaliana 6.9e-15

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  027567
        (222 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2084091 - symbol:AT3G53490 "AT3G53490" species...   529  6.5e-51   1
TAIR|locus:2151196 - symbol:AT5G02720 "AT5G02720" species...   189  6.9e-15   1


>TAIR|locus:2084091 [details] [associations]
            symbol:AT3G53490 "AT3G53490" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002686 EMBL:AL132966 EMBL:BT010898
            IPI:IPI00518006 PIR:T45889 RefSeq:NP_190917.1 UniGene:At.35189
            EnsemblPlants:AT3G53490.1 GeneID:824517 KEGG:ath:AT3G53490
            TAIR:At3g53490 InParanoid:Q9LFG9 OMA:DVFDEWE PhylomeDB:Q9LFG9
            ProtClustDB:CLSN2684925 Genevestigator:Q9LFG9 Uniprot:Q9LFG9
        Length = 225

 Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
 Identities = 103/197 (52%), Positives = 125/197 (63%)

Query:    16 FLALCMFLNSLPGLVLAAVVTLDSIKIYKTHEWLDNKPTVYFKCQGENKKILPDVKEKNT 75
             FL   +F +SLPG +L   VTLDS++I+ TH+W   KPTV+F+C+GENK +LPDVK  N 
Sbjct:    15 FLLCFIFFSSLPGTILTQEVTLDSVQIFTTHDWFSTKPTVFFQCKGENKTVLPDVKRTNV 74

Query:    76 TYVFKGEESWQPLTEFLGTKCKRCGLYEEDTFNSDDVFDEWEFCPGDFADNDGKYIRKTK 135
             +Y F GEESWQPLTE  GTKCKRCG+YE+D    D  FDEWE CP DF   +G Y R  +
Sbjct:    75 SYSFNGEESWQPLTELQGTKCKRCGIYEDDPLKYD-TFDEWELCPSDFTA-EGSYKRFKE 132

Query:   136 KEFDATFLCPKC--------KSGRTESDTHVGRKGMHXXXXXXXXXXXXXXTAIVLVAAY 187
             KEF+ATFLC  C        K   TE +   G  GMH               A+ L+  Y
Sbjct:   133 KEFNATFLCHGCSQVGAGSNKESGTEKEEQKG--GMHPGIVVLIVVLLLGVVAVGLLVGY 190

Query:   188 KYWQKKKRQQDQARFLK 204
             KYW+KKKRQQ+QARFLK
Sbjct:   191 KYWRKKKRQQEQARFLK 207


>TAIR|locus:2151196 [details] [associations]
            symbol:AT5G02720 "AT5G02720" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009827 "plant-type cell wall modification"
            evidence=RCA] [GO:0009860 "pollen tube growth" evidence=RCA]
            EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AL162973
            ProtClustDB:CLSN2684925 IPI:IPI00524876 PIR:T48293
            RefSeq:NP_195892.1 UniGene:At.33376 UniGene:At.51410
            EnsemblPlants:AT5G02720.1 GeneID:831821 KEGG:ath:AT5G02720
            TAIR:At5g02720 eggNOG:NOG308292 OMA:NCTTSTR PhylomeDB:Q9LZ13
            Genevestigator:Q9LZ13 Uniprot:Q9LZ13
        Length = 138

 Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
 Identities = 42/121 (34%), Positives = 65/121 (53%)

Query:    88 LTEFLGTKCKRCGLYEEDTFNSDDVFDEWEFCPGDFADNDGKYIRKTKKEFDATFLCPKC 147
             +T   G KCKRCG+YE+ +  SD  FD WE CP DF+ +   Y+   +KE +ATF+C  C
Sbjct:     1 MTGIGGEKCKRCGIYEQGSLVSDKEFDVWEVCPTDFSASQ-VYMHFKEKEINATFVCHGC 59

Query:   148 -KSGRTESDTHVGRKGMHXXXXXXXXXXXXXXTAIVLVAA---YKYWQKKKRQQDQARFL 203
              K     + +    +G +              T +V+V     +K+ Q+ K+Q+DQARF+
Sbjct:    60 AKFHSAVAASSPQEEGYNGLTFMIAIIAGVLCTTLVVVGGVFMFKHTQRMKKQRDQARFM 119

Query:   204 K 204
             +
Sbjct:   120 Q 120


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.137   0.434    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      222       179   0.00089  109 3  11 22  0.41    32
                                                     31  0.39    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  189 KB (2107 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.20u 0.13s 17.33t   Elapsed:  00:00:01
  Total cpu time:  17.20u 0.13s 17.33t   Elapsed:  00:00:01
  Start:  Fri May 10 23:06:27 2013   End:  Fri May 10 23:06:28 2013

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