Query 027575
Match_columns 221
No_of_seqs 123 out of 1149
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 11:58:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027575.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027575hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0406 Glutathione S-transfer 100.0 6.6E-40 1.4E-44 249.8 22.2 213 3-218 9-227 (231)
2 PRK09481 sspA stringent starva 100.0 8.5E-39 1.8E-43 248.2 20.6 193 3-204 10-204 (211)
3 PLN02473 glutathione S-transfe 100.0 4.7E-36 1E-40 233.4 17.7 195 1-202 1-211 (214)
4 PRK15113 glutathione S-transfe 100.0 3.2E-35 6.8E-40 228.7 18.3 192 1-204 1-210 (214)
5 PLN02395 glutathione S-transfe 100.0 8.6E-35 1.9E-39 226.4 18.5 194 1-202 1-210 (215)
6 PRK10542 glutathionine S-trans 100.0 1.1E-34 2.5E-39 223.4 17.2 189 4-202 1-197 (201)
7 TIGR00862 O-ClC intracellular 100.0 6.7E-34 1.5E-38 221.9 20.8 195 9-216 16-234 (236)
8 PRK13972 GSH-dependent disulfi 100.0 1.9E-34 4.2E-39 224.5 16.8 188 4-203 2-206 (215)
9 PRK10357 putative glutathione 100.0 1.2E-33 2.6E-38 218.0 19.9 190 4-202 1-200 (202)
10 TIGR01262 maiA maleylacetoacet 100.0 1E-33 2.2E-38 219.5 18.4 190 5-203 1-205 (210)
11 COG0625 Gst Glutathione S-tran 100.0 1.6E-33 3.5E-38 218.6 18.5 185 4-197 1-199 (211)
12 KOG0868 Glutathione S-transfer 100.0 4.8E-34 1E-38 205.4 13.8 192 3-203 5-208 (217)
13 PRK11752 putative S-transferas 100.0 2.7E-33 5.9E-38 223.9 18.3 197 3-204 44-260 (264)
14 PLN02378 glutathione S-transfe 100.0 7.6E-32 1.7E-36 209.4 18.6 186 9-208 17-205 (213)
15 PLN02817 glutathione dehydroge 100.0 1.9E-31 4E-36 212.4 19.7 188 10-211 71-260 (265)
16 KOG0867 Glutathione S-transfer 100.0 6.1E-31 1.3E-35 205.5 17.4 197 4-206 3-213 (226)
17 PTZ00057 glutathione s-transfe 100.0 5.2E-31 1.1E-35 203.7 16.6 192 1-204 1-201 (205)
18 PRK10387 glutaredoxin 2; Provi 100.0 1.6E-29 3.4E-34 196.1 14.7 176 4-196 1-207 (210)
19 KOG1695 Glutathione S-transfer 100.0 1.8E-27 4E-32 180.6 15.9 192 1-204 1-202 (206)
20 TIGR02182 GRXB Glutaredoxin, G 100.0 1.5E-27 3.2E-32 184.8 14.9 174 5-196 1-206 (209)
21 KOG4420 Uncharacterized conser 99.9 8.4E-26 1.8E-30 172.0 12.6 202 3-210 26-295 (325)
22 KOG1422 Intracellular Cl- chan 99.9 5.5E-24 1.2E-28 157.7 15.8 195 9-215 18-218 (221)
23 PLN02907 glutamate-tRNA ligase 99.9 1.1E-22 2.5E-27 180.4 16.2 158 1-195 1-159 (722)
24 PF13417 GST_N_3: Glutathione 99.8 7.6E-21 1.6E-25 123.4 7.9 74 6-82 1-74 (75)
25 cd03052 GST_N_GDAP1 GST_N fami 99.8 3.6E-20 7.9E-25 119.3 7.6 72 4-76 1-73 (73)
26 cd03059 GST_N_SspA GST_N famil 99.8 1.3E-19 2.9E-24 116.9 8.2 73 4-79 1-73 (73)
27 cd03061 GST_N_CLIC GST_N famil 99.8 1.4E-19 3E-24 120.2 8.2 70 10-82 20-89 (91)
28 cd03045 GST_N_Delta_Epsilon GS 99.8 2E-19 4.2E-24 116.4 7.7 73 4-77 1-74 (74)
29 cd03058 GST_N_Tau GST_N family 99.8 2.6E-19 5.7E-24 115.8 8.2 74 4-79 1-74 (74)
30 cd03050 GST_N_Theta GST_N fami 99.8 6.7E-19 1.4E-23 114.5 8.5 75 4-79 1-76 (76)
31 cd03053 GST_N_Phi GST_N family 99.8 8.7E-19 1.9E-23 114.0 8.2 74 4-78 2-76 (76)
32 cd03041 GST_N_2GST_N GST_N fam 99.8 9.9E-19 2.2E-23 113.9 7.9 74 4-79 2-77 (77)
33 cd03056 GST_N_4 GST_N family, 99.8 1.2E-18 2.6E-23 112.3 7.5 72 4-76 1-73 (73)
34 cd03060 GST_N_Omega_like GST_N 99.8 1.6E-18 3.5E-23 111.2 7.8 69 4-75 1-70 (71)
35 cd03076 GST_N_Pi GST_N family, 99.8 8.1E-19 1.7E-23 113.2 6.3 72 3-77 1-72 (73)
36 cd03048 GST_N_Ure2p_like GST_N 99.8 3E-18 6.4E-23 112.8 8.5 75 4-80 2-80 (81)
37 cd03047 GST_N_2 GST_N family, 99.8 2.3E-18 5.1E-23 111.0 7.4 72 4-76 1-73 (73)
38 cd03044 GST_N_EF1Bgamma GST_N 99.8 3.7E-18 8.1E-23 110.7 7.9 72 5-77 2-74 (75)
39 cd03051 GST_N_GTT2_like GST_N 99.8 3E-18 6.4E-23 110.7 7.3 72 4-76 1-74 (74)
40 cd03057 GST_N_Beta GST_N famil 99.8 5.7E-18 1.2E-22 110.4 8.3 75 4-80 1-77 (77)
41 cd03042 GST_N_Zeta GST_N famil 99.7 4.6E-18 1E-22 109.6 7.4 72 4-76 1-73 (73)
42 cd03037 GST_N_GRX2 GST_N famil 99.7 4.5E-18 9.8E-23 109.1 7.2 70 4-77 1-71 (71)
43 cd03046 GST_N_GTT1_like GST_N 99.7 7.8E-18 1.7E-22 109.4 8.0 75 4-80 1-76 (76)
44 cd03049 GST_N_3 GST_N family, 99.7 7.2E-18 1.6E-22 108.7 7.3 70 4-76 1-73 (73)
45 cd03055 GST_N_Omega GST_N fami 99.7 1E-17 2.2E-22 112.2 7.8 71 3-76 18-89 (89)
46 cd03039 GST_N_Sigma_like GST_N 99.7 5.7E-18 1.2E-22 108.9 6.1 72 4-77 1-72 (72)
47 cd03185 GST_C_Tau GST_C family 99.7 1.7E-16 3.7E-21 113.1 12.2 121 90-211 2-124 (126)
48 KOG3029 Glutathione S-transfer 99.7 2.9E-16 6.4E-21 121.4 13.6 179 3-192 90-354 (370)
49 PF13409 GST_N_2: Glutathione 99.7 3.5E-17 7.5E-22 104.6 6.9 67 11-78 1-70 (70)
50 cd03040 GST_N_mPGES2 GST_N fam 99.7 5.6E-17 1.2E-21 105.7 7.5 72 3-79 1-76 (77)
51 cd03038 GST_N_etherase_LigE GS 99.7 7E-17 1.5E-21 107.0 7.3 69 10-80 14-84 (84)
52 PF02798 GST_N: Glutathione S- 99.7 1E-16 2.3E-21 104.0 7.7 73 5-77 2-76 (76)
53 cd03075 GST_N_Mu GST_N family, 99.7 1.4E-16 3.1E-21 104.9 7.2 74 5-79 2-82 (82)
54 cd03077 GST_N_Alpha GST_N fami 99.7 2.3E-16 5E-21 103.2 7.9 72 3-80 1-77 (79)
55 KOG4244 Failed axon connection 99.7 8.5E-16 1.8E-20 118.3 11.2 169 10-192 59-272 (281)
56 cd03080 GST_N_Metaxin_like GST 99.7 3.8E-16 8.3E-21 101.2 7.7 67 4-80 2-75 (75)
57 cd03043 GST_N_1 GST_N family, 99.7 5.3E-16 1.1E-20 99.9 7.6 68 8-76 6-73 (73)
58 COG0435 ECM4 Predicted glutath 99.7 5.9E-16 1.3E-20 119.6 9.0 204 4-211 52-294 (324)
59 cd03190 GST_C_ECM4_like GST_C 99.6 2.8E-15 6.1E-20 109.1 10.5 125 90-215 3-131 (142)
60 cd03186 GST_C_SspA GST_N famil 99.6 3.7E-15 8E-20 103.2 10.0 104 89-199 1-106 (107)
61 cd03184 GST_C_Omega GST_C fami 99.6 3.5E-15 7.5E-20 106.2 10.0 119 91-211 2-122 (124)
62 COG2999 GrxB Glutaredoxin 2 [P 99.6 7.6E-15 1.6E-19 106.4 11.3 178 4-196 1-207 (215)
63 cd00570 GST_N_family Glutathio 99.6 2E-15 4.3E-20 95.8 7.1 71 4-76 1-71 (71)
64 cd03196 GST_C_5 GST_C family, 99.6 6.5E-15 1.4E-19 103.3 10.0 108 87-199 2-114 (115)
65 cd03054 GST_N_Metaxin GST_N fa 99.6 8.3E-15 1.8E-19 94.1 7.0 65 4-78 1-72 (72)
66 cd03198 GST_C_CLIC GST_C famil 99.6 3.6E-14 7.8E-19 101.2 10.4 103 106-211 12-133 (134)
67 cd03188 GST_C_Beta GST_C famil 99.5 5.3E-14 1.2E-18 98.2 9.0 102 91-200 2-114 (114)
68 KOG2903 Predicted glutathione 99.5 3E-14 6.5E-19 109.2 7.6 206 4-214 38-299 (319)
69 cd03201 GST_C_DHAR GST_C famil 99.5 1.9E-13 4.2E-18 96.6 10.5 103 106-211 15-119 (121)
70 cd03209 GST_C_Mu GST_C family, 99.5 1.4E-13 3.1E-18 97.4 9.7 108 91-205 2-112 (121)
71 cd03182 GST_C_GTT2_like GST_C 99.5 2.4E-13 5.2E-18 95.5 10.7 102 88-196 1-117 (117)
72 cd03203 GST_C_Lambda GST_C fam 99.5 6.4E-13 1.4E-17 93.9 11.5 114 88-210 1-119 (120)
73 cd03189 GST_C_GTT1_like GST_C 99.5 3.8E-13 8.1E-18 94.8 9.7 101 86-194 2-119 (119)
74 cd03210 GST_C_Pi GST_C family, 99.5 4.4E-13 9.6E-18 95.6 9.6 107 91-204 3-114 (126)
75 cd03187 GST_C_Phi GST_C family 99.4 9.5E-13 2.1E-17 92.5 9.5 104 91-200 2-118 (118)
76 cd03177 GST_C_Delta_Epsilon GS 99.4 7.4E-13 1.6E-17 93.3 8.5 104 91-201 2-111 (118)
77 cd03208 GST_C_Alpha GST_C fami 99.4 1.7E-12 3.6E-17 93.9 9.9 107 91-204 3-117 (137)
78 cd03191 GST_C_Zeta GST_C famil 99.4 1.7E-12 3.7E-17 91.7 9.8 106 89-202 1-119 (121)
79 cd03181 GST_C_EFB1gamma GST_C 99.4 8.3E-13 1.8E-17 93.5 8.0 109 91-204 1-118 (123)
80 cd03178 GST_C_Ure2p_like GST_C 99.4 5.9E-13 1.3E-17 92.9 7.0 103 91-200 1-112 (113)
81 cd03180 GST_C_2 GST_C family, 99.4 3.3E-12 7.1E-17 88.5 9.1 98 91-196 2-110 (110)
82 cd03207 GST_C_8 GST_C family, 99.4 1.2E-12 2.7E-17 89.8 5.5 77 117-202 26-102 (103)
83 cd03183 GST_C_Theta GST_C fami 99.3 8.4E-12 1.8E-16 88.8 8.9 102 92-200 2-120 (126)
84 cd03200 GST_C_JTV1 GST_C famil 99.3 9.4E-12 2E-16 84.3 8.6 95 72-192 1-95 (96)
85 PF00043 GST_C: Glutathione S- 99.3 4.8E-12 1E-16 85.5 7.2 72 117-194 24-95 (95)
86 cd03195 GST_C_4 GST_C family, 99.3 1.1E-11 2.3E-16 86.8 8.1 102 89-201 1-112 (114)
87 cd03079 GST_N_Metaxin2 GST_N f 99.3 7.4E-12 1.6E-16 79.9 6.2 60 10-78 15-74 (74)
88 PRK10638 glutaredoxin 3; Provi 99.3 1.4E-11 3.1E-16 81.2 7.4 74 1-76 1-74 (83)
89 TIGR02190 GlrX-dom Glutaredoxi 99.3 2.5E-11 5.4E-16 79.2 7.1 71 3-76 9-79 (79)
90 cd03204 GST_C_GDAP1 GST_C fami 99.2 3.9E-11 8.4E-16 83.0 7.5 75 117-196 25-111 (111)
91 PF13410 GST_C_2: Glutathione 99.2 2E-11 4.4E-16 77.5 5.3 67 118-189 3-69 (69)
92 cd03206 GST_C_7 GST_C family, 99.2 5.1E-11 1.1E-15 81.3 7.3 71 118-196 30-100 (100)
93 cd03179 GST_C_1 GST_C family, 99.2 7.2E-11 1.6E-15 81.1 7.1 93 91-191 2-105 (105)
94 cd03029 GRX_hybridPRX5 Glutare 99.1 2.7E-10 5.8E-15 73.0 7.5 71 3-76 2-72 (72)
95 cd03192 GST_C_Sigma_like GST_C 99.1 3.4E-10 7.3E-15 77.7 7.2 94 91-190 2-104 (104)
96 PF14497 GST_C_3: Glutathione 99.1 9.9E-11 2.2E-15 79.8 4.5 95 88-192 2-99 (99)
97 cd03194 GST_C_3 GST_C family, 99.1 1.2E-09 2.5E-14 76.5 9.2 71 120-201 40-113 (114)
98 cd03202 GST_C_etherase_LigE GS 99.0 6.5E-10 1.4E-14 78.9 7.0 69 119-193 56-124 (124)
99 KOG3027 Mitochondrial outer me 99.0 6.5E-09 1.4E-13 77.6 11.8 169 11-192 33-247 (257)
100 cd00299 GST_C_family Glutathio 99.0 1.6E-09 3.5E-14 73.3 6.8 69 117-190 32-100 (100)
101 cd03193 GST_C_Metaxin GST_C fa 98.9 1.4E-09 3.1E-14 72.4 5.1 69 120-191 18-88 (88)
102 cd03078 GST_N_Metaxin1_like GS 98.9 4.4E-09 9.5E-14 67.4 6.5 59 10-78 14-72 (73)
103 PRK10329 glutaredoxin-like pro 98.9 5E-09 1.1E-13 68.5 6.4 60 4-66 3-62 (81)
104 cd03027 GRX_DEP Glutaredoxin ( 98.9 6.6E-09 1.4E-13 66.6 6.6 69 3-73 2-70 (73)
105 cd02066 GRX_family Glutaredoxi 98.8 1.7E-08 3.8E-13 63.9 6.8 70 3-74 1-70 (72)
106 cd02976 NrdH NrdH-redoxin (Nrd 98.8 1.6E-08 3.4E-13 64.4 5.9 63 3-67 1-63 (73)
107 KOG3028 Translocase of outer m 98.8 3.4E-07 7.3E-12 72.9 13.9 171 10-192 15-233 (313)
108 TIGR02196 GlrX_YruB Glutaredox 98.8 3.8E-08 8.2E-13 62.7 6.7 70 4-75 2-73 (74)
109 cd03418 GRX_GRXb_1_3_like Glut 98.7 5.5E-08 1.2E-12 62.5 6.7 73 3-76 1-73 (75)
110 COG0695 GrxC Glutaredoxin and 98.7 6E-08 1.3E-12 63.2 6.8 72 3-75 2-74 (80)
111 cd03197 GST_C_mPGES2 GST_C fam 98.7 1.2E-07 2.7E-12 68.5 8.8 112 62-192 28-145 (149)
112 cd03211 GST_C_Metaxin2 GST_C f 98.7 5.7E-08 1.2E-12 69.1 6.4 72 117-190 53-125 (126)
113 cd03205 GST_C_6 GST_C family, 98.7 7.6E-08 1.7E-12 65.3 6.5 66 117-190 33-98 (98)
114 PF14834 GST_C_4: Glutathione 98.7 1.8E-07 4E-12 63.8 7.9 103 88-201 1-113 (117)
115 TIGR02181 GRX_bact Glutaredoxi 98.6 1.5E-07 3.2E-12 61.2 6.6 72 4-77 1-72 (79)
116 PRK11200 grxA glutaredoxin 1; 98.6 2.2E-07 4.8E-12 61.3 7.5 78 1-80 1-84 (85)
117 TIGR02194 GlrX_NrdH Glutaredox 98.6 1.5E-07 3.3E-12 60.1 6.0 57 4-63 1-57 (72)
118 cd03212 GST_C_Metaxin1_3 GST_C 98.6 1.5E-07 3.2E-12 67.9 6.3 73 118-192 61-134 (137)
119 TIGR02189 GlrX-like_plant Glut 98.6 3.1E-07 6.7E-12 62.4 7.2 72 3-75 9-82 (99)
120 TIGR02200 GlrX_actino Glutared 98.6 3.5E-07 7.7E-12 58.9 7.0 72 3-76 1-76 (77)
121 PF00462 Glutaredoxin: Glutare 98.5 2.1E-07 4.5E-12 57.2 4.7 60 4-65 1-60 (60)
122 PHA03050 glutaredoxin; Provisi 98.5 8.1E-07 1.8E-11 61.3 6.9 70 3-73 14-88 (108)
123 TIGR02183 GRXA Glutaredoxin, G 98.4 1.4E-06 3E-11 57.6 7.4 76 4-80 2-83 (86)
124 cd03419 GRX_GRXh_1_2_like Glut 98.4 1.8E-06 4E-11 56.3 7.9 74 3-77 1-76 (82)
125 TIGR02180 GRX_euk Glutaredoxin 98.3 4.8E-06 1.1E-10 54.4 6.8 73 4-77 1-77 (84)
126 TIGR00365 monothiol glutaredox 98.2 7.3E-06 1.6E-10 55.4 6.8 72 3-76 13-89 (97)
127 cd03028 GRX_PICOT_like Glutare 98.1 1.3E-05 2.9E-10 53.4 6.9 71 3-75 9-84 (90)
128 PRK12759 bifunctional gluaredo 98.0 2.6E-05 5.6E-10 66.4 7.7 70 1-73 1-79 (410)
129 PF10568 Tom37: Outer mitochon 97.9 4.7E-05 1E-09 48.4 6.3 55 11-75 13-71 (72)
130 cd03031 GRX_GRX_like Glutaredo 97.7 0.00017 3.6E-09 52.5 7.0 71 4-75 2-81 (147)
131 KOG1752 Glutaredoxin and relat 97.7 0.00021 4.6E-09 48.7 7.0 73 3-76 15-89 (104)
132 PRK10824 glutaredoxin-4; Provi 97.7 0.00024 5.3E-09 49.3 6.8 71 3-75 16-91 (115)
133 cd02973 TRX_GRX_like Thioredox 97.3 0.001 2.2E-08 41.4 5.5 58 3-66 2-64 (67)
134 PTZ00062 glutaredoxin; Provisi 97.2 0.0013 2.8E-08 50.5 7.0 71 3-75 114-189 (204)
135 cd03036 ArsC_like Arsenate Red 96.8 0.0016 3.4E-08 45.1 3.8 33 4-36 1-33 (111)
136 cd02977 ArsC_family Arsenate R 96.8 0.002 4.2E-08 44.1 4.0 33 4-36 1-33 (105)
137 PRK01655 spxA transcriptional 96.8 0.0022 4.9E-08 45.8 4.4 33 4-36 2-34 (131)
138 KOG1147 Glutamyl-tRNA syntheta 96.7 0.0015 3.2E-08 56.3 3.2 106 61-188 44-150 (712)
139 cd03032 ArsC_Spx Arsenate Redu 96.7 0.0033 7.1E-08 43.8 4.4 32 4-35 2-33 (115)
140 PF04399 Glutaredoxin2_C: Glut 96.6 0.0021 4.6E-08 45.7 3.3 67 119-195 57-123 (132)
141 cd03199 GST_C_GRX2 GST_C famil 96.6 0.0072 1.6E-07 42.7 5.5 67 120-196 59-125 (128)
142 PF05768 DUF836: Glutaredoxin- 96.5 0.015 3.3E-07 37.7 6.4 55 3-62 1-57 (81)
143 PRK10026 arsenate reductase; P 96.5 0.0051 1.1E-07 44.4 4.4 34 1-34 1-34 (141)
144 TIGR00412 redox_disulf_2 small 96.4 0.018 3.8E-07 36.9 6.3 57 1-66 1-61 (76)
145 TIGR01617 arsC_related transcr 96.4 0.0054 1.2E-07 42.9 4.0 32 4-35 1-32 (117)
146 PRK13344 spxA transcriptional 96.3 0.0077 1.7E-07 43.1 4.5 33 4-36 2-34 (132)
147 PRK12559 transcriptional regul 96.2 0.013 2.9E-07 41.8 5.4 33 4-36 2-34 (131)
148 cd03030 GRX_SH3BGR Glutaredoxi 96.2 0.026 5.7E-07 37.6 6.3 68 4-73 2-79 (92)
149 COG4545 Glutaredoxin-related p 96.0 0.027 5.9E-07 35.4 5.4 66 1-66 1-77 (85)
150 cd03035 ArsC_Yffb Arsenate Red 95.7 0.017 3.6E-07 39.6 4.0 32 4-35 1-32 (105)
151 COG0278 Glutaredoxin-related p 95.7 0.029 6.4E-07 37.5 4.7 68 8-77 26-94 (105)
152 cd03033 ArsC_15kD Arsenate Red 95.6 0.02 4.3E-07 39.8 4.1 32 4-35 2-33 (113)
153 TIGR00411 redox_disulf_1 small 95.6 0.061 1.3E-06 34.4 6.2 57 3-63 2-62 (82)
154 cd03026 AhpF_NTD_C TRX-GRX-lik 95.3 0.058 1.2E-06 35.7 5.4 58 3-66 15-77 (89)
155 COG1393 ArsC Arsenate reductas 95.3 0.035 7.5E-07 38.8 4.3 34 1-35 1-34 (117)
156 cd01659 TRX_superfamily Thiore 94.9 0.08 1.7E-06 31.1 4.7 54 4-60 1-59 (69)
157 PF13192 Thioredoxin_3: Thiore 94.8 0.16 3.4E-06 32.4 6.2 56 4-67 3-62 (76)
158 PRK10853 putative reductase; P 94.6 0.068 1.5E-06 37.4 4.3 32 4-35 2-33 (118)
159 TIGR01616 nitro_assoc nitrogen 94.3 0.083 1.8E-06 37.4 4.2 33 3-35 2-34 (126)
160 PF04908 SH3BGR: SH3-binding, 94.1 0.18 3.8E-06 34.1 5.3 70 1-73 1-85 (99)
161 PHA02125 thioredoxin-like prot 94.1 0.18 3.9E-06 32.0 5.2 51 4-60 2-52 (75)
162 TIGR00014 arsC arsenate reduct 93.5 0.12 2.7E-06 35.8 3.9 32 4-35 1-32 (114)
163 cd03034 ArsC_ArsC Arsenate Red 93.5 0.13 2.7E-06 35.6 3.9 31 4-34 1-31 (112)
164 PF11287 DUF3088: Protein of u 93.3 0.37 8.1E-06 33.0 5.8 68 11-80 23-108 (112)
165 KOG0911 Glutaredoxin-related p 88.8 1.1 2.4E-05 34.7 5.0 68 8-77 150-217 (227)
166 PF11801 Tom37_C: Tom37 C-term 87.5 0.98 2.1E-05 33.7 4.1 39 124-163 111-153 (168)
167 PRK15317 alkyl hydroperoxide r 86.1 0.8 1.7E-05 40.5 3.4 72 3-78 119-197 (517)
168 TIGR03140 AhpF alkyl hydropero 85.2 0.86 1.9E-05 40.3 3.2 72 3-78 120-198 (515)
169 TIGR03143 AhpF_homolog putativ 84.3 2.4 5.2E-05 37.9 5.6 56 3-65 479-540 (555)
170 TIGR01295 PedC_BrcD bacterioci 82.4 8.8 0.00019 26.8 6.8 61 4-65 27-103 (122)
171 PF03960 ArsC: ArsC family; I 82.3 1.9 4.1E-05 29.5 3.3 29 7-35 1-29 (110)
172 TIGR02187 GlrX_arch Glutaredox 75.8 14 0.00031 28.5 6.8 55 4-62 137-194 (215)
173 cd02953 DsbDgamma DsbD gamma f 72.9 12 0.00025 24.9 5.1 54 4-59 15-77 (104)
174 PF00085 Thioredoxin: Thioredo 72.9 23 0.00049 23.0 8.4 69 4-77 21-102 (103)
175 cd02949 TRX_NTR TRX domain, no 70.8 21 0.00046 23.3 5.9 57 4-65 17-80 (97)
176 cd02989 Phd_like_TxnDC9 Phosdu 69.5 17 0.00037 24.9 5.3 59 4-66 26-89 (113)
177 cd02975 PfPDO_like_N Pyrococcu 69.4 16 0.00035 25.0 5.2 53 4-60 25-81 (113)
178 cd02947 TRX_family TRX family; 68.9 25 0.00055 21.8 6.1 54 4-63 14-74 (93)
179 PHA03075 glutaredoxin-like pro 67.6 12 0.00025 26.0 4.0 65 1-77 1-68 (123)
180 cd02959 ERp19 Endoplasmic reti 65.3 38 0.00083 23.3 6.5 60 4-66 23-91 (117)
181 PF09868 DUF2095: Uncharacteri 65.2 5.8 0.00013 27.4 2.1 65 14-79 24-91 (128)
182 cd02984 TRX_PICOT TRX domain, 61.1 42 0.0009 21.6 6.5 57 4-64 18-80 (97)
183 KOG1668 Elongation factor 1 be 58.7 4.1 8.9E-05 31.8 0.6 59 127-197 10-68 (231)
184 cd02963 TRX_DnaJ TRX domain, D 58.6 50 0.0011 22.3 6.0 57 4-64 28-91 (111)
185 PF09635 MetRS-N: MetRS-N bind 53.9 9.5 0.00021 26.7 1.7 26 54-79 35-62 (122)
186 KOG2824 Glutaredoxin-related p 53.1 20 0.00042 28.9 3.5 61 14-76 149-213 (281)
187 TIGR02681 phage_pRha phage reg 52.5 11 0.00024 25.8 1.9 26 55-80 2-28 (108)
188 PRK09381 trxA thioredoxin; Pro 51.4 69 0.0015 21.2 7.8 58 4-65 25-88 (109)
189 cd02951 SoxW SoxW family; SoxW 51.2 58 0.0013 22.3 5.5 16 4-19 18-33 (125)
190 PTZ00051 thioredoxin; Provisio 50.7 66 0.0014 20.7 6.4 57 4-64 22-83 (98)
191 PF01323 DSBA: DSBA-like thior 50.6 27 0.00058 25.9 4.0 35 3-37 1-40 (193)
192 COG3019 Predicted metal-bindin 50.2 29 0.00062 25.0 3.6 72 3-79 27-104 (149)
193 TIGR02187 GlrX_arch Glutaredox 46.9 83 0.0018 24.2 6.2 54 3-60 22-83 (215)
194 cd02962 TMX2 TMX2 family; comp 43.5 1.2E+02 0.0026 22.1 6.2 60 4-66 51-122 (152)
195 COG5494 Predicted thioredoxin/ 42.9 64 0.0014 25.0 4.8 69 4-76 13-85 (265)
196 cd03003 PDI_a_ERdj5_N PDIa fam 41.5 99 0.0021 20.1 6.6 56 4-63 22-83 (101)
197 PF06110 DUF953: Eukaryotic pr 40.6 38 0.00082 23.7 3.1 59 8-69 34-106 (119)
198 PRK09266 hypothetical protein; 40.1 45 0.00097 26.6 3.9 58 21-79 200-258 (266)
199 PF13728 TraF: F plasmid trans 39.9 98 0.0021 24.0 5.6 54 4-59 124-188 (215)
200 cd03020 DsbA_DsbC_DsbG DsbA fa 38.8 39 0.00085 25.5 3.3 22 3-24 80-101 (197)
201 KOG3425 Uncharacterized conser 38.6 1.2E+02 0.0027 21.3 5.2 68 9-78 42-122 (128)
202 PF13098 Thioredoxin_2: Thiore 38.4 36 0.00078 22.7 2.7 34 4-37 9-49 (112)
203 PRK10996 thioredoxin 2; Provis 37.6 1.5E+02 0.0032 21.0 6.8 58 4-65 56-119 (139)
204 PF04134 DUF393: Protein of un 35.2 1.4E+02 0.003 20.0 5.3 70 6-78 1-77 (114)
205 PRK11657 dsbG disulfide isomer 34.8 55 0.0012 26.0 3.6 20 4-23 121-140 (251)
206 cd02954 DIM1 Dim1 family; Dim1 34.7 1.5E+02 0.0034 20.4 5.5 57 5-65 19-81 (114)
207 cd02993 PDI_a_APS_reductase PD 34.5 1.4E+02 0.003 19.8 6.0 53 4-59 25-83 (109)
208 PHA02278 thioredoxin-like prot 34.2 1.4E+02 0.0031 19.9 6.7 60 4-65 18-85 (103)
209 cd02955 SSP411 TRX domain, SSP 32.2 1.8E+02 0.0038 20.3 6.1 62 5-68 20-97 (124)
210 cd02994 PDI_a_TMX PDIa family, 32.2 1.4E+02 0.0031 19.2 5.8 53 4-60 20-77 (101)
211 PRK10877 protein disulfide iso 32.1 71 0.0015 25.1 3.8 22 3-24 110-131 (232)
212 cd03021 DsbA_GSTK DsbA family, 31.9 73 0.0016 24.3 3.8 34 3-36 2-39 (209)
213 cd02957 Phd_like Phosducin (Ph 31.5 1.3E+02 0.0029 20.1 4.7 59 4-67 28-91 (113)
214 COG2761 FrnE Predicted dithiol 30.3 40 0.00086 26.4 2.0 15 3-17 7-21 (225)
215 TIGR01068 thioredoxin thioredo 30.3 1.5E+02 0.0032 18.8 8.0 56 4-63 18-79 (101)
216 cd02956 ybbN ybbN protein fami 30.2 1.5E+02 0.0033 18.9 6.6 57 4-64 16-78 (96)
217 PRK13947 shikimate kinase; Pro 30.1 79 0.0017 22.9 3.6 30 1-30 1-30 (171)
218 cd04911 ACT_AKiii-YclM-BS_1 AC 29.6 61 0.0013 20.7 2.4 26 12-37 15-40 (76)
219 cd02948 TRX_NDPK TRX domain, T 29.5 1.7E+02 0.0036 19.2 7.3 55 4-64 21-83 (102)
220 KOG2501 Thioredoxin, nucleored 28.9 1.2E+02 0.0025 22.4 4.1 44 4-47 36-88 (157)
221 COG5515 Uncharacterized conser 28.8 62 0.0013 19.6 2.2 21 4-24 3-27 (70)
222 PF09413 DUF2007: Domain of un 28.6 60 0.0013 19.6 2.3 32 5-36 2-33 (67)
223 cd02970 PRX_like2 Peroxiredoxi 28.4 1E+02 0.0022 21.5 3.9 56 8-65 32-92 (149)
224 cd02996 PDI_a_ERp44 PDIa famil 26.2 2E+02 0.0043 18.9 5.1 55 4-63 22-89 (108)
225 PF11823 DUF3343: Protein of u 26.1 1.3E+02 0.0027 18.7 3.5 33 5-37 4-36 (73)
226 PF12062 HSNSD: heparan sulfat 26.1 1.1E+02 0.0023 26.9 4.0 42 5-61 64-105 (487)
227 PRK13949 shikimate kinase; Pro 26.1 1E+02 0.0023 22.7 3.6 31 1-31 1-31 (169)
228 cd02972 DsbA_family DsbA famil 25.9 1.2E+02 0.0027 18.8 3.7 22 4-25 1-22 (98)
229 cd02978 KaiB_like KaiB-like fa 25.8 1.8E+02 0.0039 18.3 4.1 53 4-60 4-61 (72)
230 PRK13808 adenylate kinase; Pro 25.4 2E+02 0.0042 24.1 5.4 91 1-97 1-98 (333)
231 TIGR01764 excise DNA binding d 25.2 85 0.0018 17.0 2.4 24 53-76 25-48 (49)
232 cd03022 DsbA_HCCA_Iso DsbA fam 24.8 1.1E+02 0.0023 22.6 3.6 32 4-35 1-36 (192)
233 cd02950 TxlA TRX-like protein 24.8 2.6E+02 0.0056 19.8 6.6 60 4-65 24-90 (142)
234 PTZ00102 disulphide isomerase; 24.5 4.6E+02 0.01 22.6 8.4 72 4-80 53-139 (477)
235 PF10022 DUF2264: Uncharacteri 24.2 1.5E+02 0.0034 25.0 4.6 102 55-163 98-213 (361)
236 cd03024 DsbA_FrnE DsbA family, 24.0 88 0.0019 23.4 3.0 19 4-22 1-19 (201)
237 cd02987 Phd_like_Phd Phosducin 23.7 3.1E+02 0.0067 20.4 6.3 59 5-68 88-151 (175)
238 PF00731 AIRC: AIR carboxylase 23.5 1.3E+02 0.0029 21.9 3.6 27 11-37 12-38 (150)
239 KOG0190 Protein disulfide isom 23.5 5.3E+02 0.012 23.0 8.0 73 4-80 46-133 (493)
240 cd02997 PDI_a_PDIR PDIa family 23.0 2.2E+02 0.0047 18.3 6.4 57 4-63 21-86 (104)
241 COG4105 ComL DNA uptake lipopr 23.0 3.2E+02 0.0069 21.9 5.9 90 7-105 62-169 (254)
242 PF12728 HTH_17: Helix-turn-he 22.3 1.1E+02 0.0025 17.1 2.6 26 53-78 25-50 (51)
243 cd03025 DsbA_FrnE_like DsbA fa 21.7 1.6E+02 0.0034 21.8 3.9 31 4-34 3-39 (193)
244 PF15608 PELOTA_1: PELOTA RNA 21.3 1.8E+02 0.0038 19.7 3.6 29 5-33 59-87 (100)
245 cd00449 PLPDE_IV PyridoxaL 5'- 21.2 91 0.002 24.5 2.7 57 21-78 196-255 (256)
246 TIGR01130 ER_PDI_fam protein d 20.9 5.3E+02 0.011 22.0 8.4 72 4-80 22-110 (462)
247 cd02961 PDI_a_family Protein D 20.8 2.3E+02 0.0049 17.7 6.1 53 4-60 19-77 (101)
248 COG3109 ProQ Activator of osmo 20.6 3.8E+02 0.0082 20.2 6.7 19 63-81 5-23 (208)
249 cd01557 BCAT_beta_family BCAT_ 20.4 72 0.0016 25.7 1.9 57 21-78 211-272 (279)
250 PF01552 Pico_P2B: Picornaviru 20.4 78 0.0017 21.3 1.7 27 5-31 70-96 (99)
251 cd03006 PDI_a_EFP1_N PDIa fami 20.4 2.4E+02 0.0052 19.2 4.3 55 4-63 33-95 (113)
No 1
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.6e-40 Score=249.84 Aligned_cols=213 Identities=41% Similarity=0.754 Sum_probs=186.9
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhhCC-C
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEMWP-Q 81 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~~~-~ 81 (221)
+++||++..|||++|++++|..+||+|+.+..|.. ++++++++.||-.++||||+|||.+|+||..|++|||+.++ +
T Consensus 9 ~vrL~~~w~sPfa~R~~iaL~~KgI~yE~veedl~--~Ks~~ll~~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~~ 86 (231)
T KOG0406|consen 9 TVKLLGMWFSPFAQRVRIALKLKGIPYEYVEEDLT--NKSEWLLEKNPVHKKVPVLEHNGKPICESLIIVEYIDETWPSG 86 (231)
T ss_pred eEEEEEeecChHHHHHHHHHHhcCCceEEEecCCC--CCCHHHHHhccccccCCEEEECCceehhhHHHHHHHHhhccCC
Confidence 38999999999999999999999999999999998 89999999996559999999999999999999999999999 5
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhhh-hhhHHhhcC-Cc-hHHHHHHHHHHHHHHHHHhcccC-CCCeeecCCCchhHHHHH
Q 027575 82 SPLMPNDPYDRALARFWIKFGEDK-GVAVWKMFH-SN-QDEESRMKEILEMLQTIEEHGIG-EKKIFHGDKIGSLEIAFG 157 (221)
Q Consensus 82 ~~l~p~~~~~~a~~~~~~~~~~~~-~~~~~~~~~-~~-~~~~~~~~~~~~~l~~l~e~~L~-~~~~l~G~~~t~aD~~l~ 157 (221)
++++|+||.+|++.+.|..++++. +........ .+ +..+...+++.+.|..| |+-|. +++|+.|++++++|++++
T Consensus 87 ~~iLP~DPy~Ra~arfwa~~id~~~~~~~~~~~~~~~~e~~~~~~~e~~e~l~~l-E~el~k~k~~fgG~~~G~vDi~~~ 165 (231)
T KOG0406|consen 87 PPILPSDPYERAQARFWAEYIDKKVFFVGRFVVAAKGGEEQEAAKEELREALKVL-EEELGKGKDFFGGETIGFVDIAIG 165 (231)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHH-HHHHhcCCCCCCCCCcCHhhhhHH
Confidence 899999999999999999999988 544444444 22 77888899999999999 77787 889999999999999999
Q ss_pred HHHHHH-HHHHHHhcccccCCCCCchHHHHHHHHhcCcchhccCCChhhHHHHHHHHHHhhc
Q 027575 158 SMLYWL-QILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDRDGISLFFKRRRENLL 218 (221)
Q Consensus 158 ~~l~~~-~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 218 (221)
+.+.++ .......+.+.+....+|.|.+|.++|.+++.|++++++.+.+..+++++++...
T Consensus 166 p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~~V~~~~p~~e~~~e~~~~~~~~~~ 227 (231)
T KOG0406|consen 166 PSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKEDEAVKAVLPDSEKVVEFMKKYRQGSP 227 (231)
T ss_pred hhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcChhHHhhcCCHHHHHHHHHHHHHhcc
Confidence 655544 4433333345565789999999999999999999999999999999999998744
No 2
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=100.00 E-value=8.5e-39 Score=248.25 Aligned_cols=193 Identities=23% Similarity=0.368 Sum_probs=164.9
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhhCCCC
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEMWPQS 82 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~~~~~ 82 (221)
.|+||+++.||+|++++++|+++|++|+.+.++.. +++++|+++||+ |+||+|++||.+|+||.+|++||++++|+.
T Consensus 10 ~~~Ly~~~~s~~~~rv~~~L~e~gl~~e~~~v~~~--~~~~~~~~~nP~-g~VPvL~~~g~~l~ES~AIl~YL~~~~~~~ 86 (211)
T PRK09481 10 VMTLFSGPTDIYSHQVRIVLAEKGVSVEIEQVEKD--NLPQDLIDLNPY-QSVPTLVDRELTLYESRIIMEYLDERFPHP 86 (211)
T ss_pred eeEEeCCCCChhHHHHHHHHHHCCCCCEEEeCCcc--cCCHHHHHhCCC-CCCCEEEECCEEeeCHHHHHHHHHHhCCCC
Confidence 38999999999999999999999999999999986 778999999998 999999999999999999999999999988
Q ss_pred CCCCCCHHHHHHHHHHHHHhhhh-hhhHHhhcCCc-hHHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHH
Q 027575 83 PLMPNDPYDRALARFWIKFGEDK-GVAVWKMFHSN-QDEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSML 160 (221)
Q Consensus 83 ~l~p~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l 160 (221)
.|+|.++.+++++++|+.+++.. ........... +..+.....+.+.+..| |++|++++|++|+++|+||+++++.+
T Consensus 87 ~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l-e~~L~~~~~l~G~~~t~AD~~l~~~~ 165 (211)
T PRK09481 87 PLMPVYPVARGESRLMMHRIEKDWYSLMNKIVNGSASEADAARKQLREELLAI-APVFGEKPYFMSEEFSLVDCYLAPLL 165 (211)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH-HHHhccCCcccCCCccHHHHHHHHHH
Confidence 89999999999999999877655 32222222222 44566778899999999 99999999999999999999999988
Q ss_pred HHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcchhccCCChh
Q 027575 161 YWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDRD 204 (221)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 204 (221)
.++... +.++. ...+|+|++|++++.++|+|++++...+
T Consensus 166 ~~~~~~----~~~~~-~~~~p~l~~w~~~~~~rp~~~~~~~~~~ 204 (211)
T PRK09481 166 WRLPVL----GIELS-GPGAKELKGYMTRVFERDSFLASLTEAE 204 (211)
T ss_pred HHHHhc----CCCCC-CCCChhHHHHHHHHhccHHHHHHcCHHH
Confidence 776432 44332 2578999999999999999999987643
No 3
>PLN02473 glutathione S-transferase
Probab=100.00 E-value=4.7e-36 Score=233.36 Aligned_cols=195 Identities=18% Similarity=0.295 Sum_probs=160.8
Q ss_pred CcceEEeccCCChhHHHHHHHHHhhCCCceEEEccccC-ccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhhC
Q 027575 1 MAEVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEMW 79 (221)
Q Consensus 1 M~~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~~ 79 (221)
|. |+||+++.||+++|++++|.++|++|+.+.++... +..+++++++||+ |+||+|++||.+|+||.+|++||++++
T Consensus 1 ~~-~kLy~~~~s~~~~rv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~nP~-g~vP~L~~~g~~l~ES~aI~~YL~~~~ 78 (214)
T PLN02473 1 MV-VKVYGQIKAANPQRVLLCFLEKGIEFEVIHVDLDKLEQKKPEHLLRQPF-GQVPAIEDGDLKLFESRAIARYYATKY 78 (214)
T ss_pred Cc-eEEecCCCCCchHHHHHHHHHcCCCceEEEecCcccccCCHHHHhhCCC-CCCCeEEECCEEEEehHHHHHHHHHHc
Confidence 54 89999999999999999999999999999998865 5778999999999 899999999999999999999999999
Q ss_pred CCC--CCCCCCHHHHHHHHHHHHHhhhhhhh-----H-Hhhc----CCc---hHHHHHHHHHHHHHHHHHhcccCCCCee
Q 027575 80 PQS--PLMPNDPYDRALARFWIKFGEDKGVA-----V-WKMF----HSN---QDEESRMKEILEMLQTIEEHGIGEKKIF 144 (221)
Q Consensus 80 ~~~--~l~p~~~~~~a~~~~~~~~~~~~~~~-----~-~~~~----~~~---~~~~~~~~~~~~~l~~l~e~~L~~~~~l 144 (221)
++. +|+|.++.+++++++|+.+..+.+.. + ...+ +.+ +..+....++.+.++.| |+.|++++|+
T Consensus 79 ~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l 157 (214)
T PLN02473 79 ADQGTDLLGKTLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPRLGEPCDVALVEELKVKFDKVLDVY-ENRLATNRYL 157 (214)
T ss_pred CCcCCCCCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHHHHHHH-HHHhccCCcc
Confidence 743 69999999999999999887665211 1 1122 111 33455678899999999 9999988999
Q ss_pred ecCCCchhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcchhccCCC
Q 027575 145 HGDKIGSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPD 202 (221)
Q Consensus 145 ~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 202 (221)
+|+++|+||+++++.+.++...... .+. ...+|+|.+|++++.++|+|++++..
T Consensus 158 ~Gd~~t~ADi~~~~~~~~~~~~~~~--~~~--~~~~P~l~~w~~~~~~~p~~~~~~~~ 211 (214)
T PLN02473 158 GGDEFTLADLTHMPGMRYIMNETSL--SGL--VTSRENLNRWWNEISARPAWKKLMEL 211 (214)
T ss_pred cCCCCCHHHHHHHHHHHHHHhcccc--HHH--HhcCHHHHHHHHHHhcChhhHHHHHH
Confidence 9999999999999988876321111 111 35899999999999999999998754
No 4
>PRK15113 glutathione S-transferase; Provisional
Probab=100.00 E-value=3.2e-35 Score=228.69 Aligned_cols=192 Identities=20% Similarity=0.250 Sum_probs=158.2
Q ss_pred Cc--ceEEeccC--CChhHHHHHHHHHhhCCCceEEEccccC-ccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHH
Q 027575 1 MA--EVKLLGTL--PSPFVYRVIWALKLKGVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYI 75 (221)
Q Consensus 1 M~--~~~Ly~~~--~sp~~~~~~~~l~~~gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL 75 (221)
|+ .|+||+.+ .||+|++++++|.++||+|+.+.+++.. +...++|+++||+ |+||+|++||.+|+||.+|++||
T Consensus 1 ~~~~~~~Ly~~~~~~s~~~~rv~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~-g~VP~L~~~~~~l~ES~aI~~YL 79 (214)
T PRK15113 1 MSKPAITLYSDAHFFSPYVMSAFVALQEKGLPFELKTVDLDAGEHLQPTYQGYSLT-RRVPTLQHDDFELSESSAIAEYL 79 (214)
T ss_pred CCCCeEEEEeCCCCCCchHHHHHHHHHHcCCCCeEEEeCCCCccccCHHHHhcCCC-CCCCEEEECCEEEecHHHHHHHH
Confidence 55 47999976 7999999999999999999999999875 5677999999998 89999999999999999999999
Q ss_pred HhhCCCCC---CCCCCHHHHHHHHHHHHHhhhh-hhhHH-----hhcCC-c--hHHHHHHHHHHHHHHHHHhcccCC-CC
Q 027575 76 EEMWPQSP---LMPNDPYDRALARFWIKFGEDK-GVAVW-----KMFHS-N--QDEESRMKEILEMLQTIEEHGIGE-KK 142 (221)
Q Consensus 76 ~~~~~~~~---l~p~~~~~~a~~~~~~~~~~~~-~~~~~-----~~~~~-~--~~~~~~~~~~~~~l~~l~e~~L~~-~~ 142 (221)
+++++++. ++|.++.+++++++|+.+.+.. .+... ..+.. . +..+.....+.+.++.| |++|++ ++
T Consensus 80 ~~~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~ 158 (214)
T PRK15113 80 EERFAPPAWERIYPADLQARARARQIQAWLRSDLMPLREERPTDVVFAGAKKAPLSEAGKAAAEKLFAVA-ERLLAPGQP 158 (214)
T ss_pred HHHcCCCCccccCCCCHHHHHHHHHHHHHHHhhhHHHhccCccchhccCCCCCcccHHHHHHHHHHHHHH-HHHHhcCCC
Confidence 99998765 9999999999999999988655 32211 11211 1 33455677889999999 999974 57
Q ss_pred eeecCCCchhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcchhccCCChh
Q 027575 143 IFHGDKIGSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDRD 204 (221)
Q Consensus 143 ~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 204 (221)
|++|+ +|+|||++++.+.++... +.+. .|+|.+|++++.++|+|++++++.+
T Consensus 159 ~l~G~-~TlADi~l~~~l~~~~~~----~~~~-----~p~l~~~~~r~~~rp~~~~~~~~~~ 210 (214)
T PRK15113 159 NLFGE-WCIADTDLALMLNRLVLH----GDEV-----PERLADYATFQWQRASVQRWLALSA 210 (214)
T ss_pred EeeCC-ccHHHHHHHHHHHHHHHc----CCCC-----CHHHHHHHHHHhcCHHHHHHHHHhh
Confidence 99996 999999999998877321 3221 2999999999999999999887654
No 5
>PLN02395 glutathione S-transferase
Probab=100.00 E-value=8.6e-35 Score=226.38 Aligned_cols=194 Identities=21% Similarity=0.346 Sum_probs=157.6
Q ss_pred CcceEEeccCCChhHHHHHHHHHhhCCCceEEEccccC-ccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhhC
Q 027575 1 MAEVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEMW 79 (221)
Q Consensus 1 M~~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~~ 79 (221)
|+ +|||+.+.| +++|++++|.++|++|+.+.+++.. +.++++|+++||+ |+||+|+++|.+|+||.+|++||++++
T Consensus 1 ~~-~~ly~~~~~-~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~~nP~-g~vP~L~~~~~~l~ES~aI~~YL~~~~ 77 (215)
T PLN02395 1 MV-LKVYGPAFA-SPKRALVTLIEKGVEFETVPVDLMKGEHKQPEYLALQPF-GVVPVIVDGDYKIFESRAIMRYYAEKY 77 (215)
T ss_pred Ce-EEEEcCCcC-cHHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhCCC-CCCCEEEECCEEEEcHHHHHHHHHHHc
Confidence 65 999997654 7999999999999999999998864 5678899999999 999999999999999999999999999
Q ss_pred CC--CCCCCCCHHHHHHHHHHHHHhhhh-hhhHH----h-hc----CCc---hHHHHHHHHHHHHHHHHHhcccCCCCee
Q 027575 80 PQ--SPLMPNDPYDRALARFWIKFGEDK-GVAVW----K-MF----HSN---QDEESRMKEILEMLQTIEEHGIGEKKIF 144 (221)
Q Consensus 80 ~~--~~l~p~~~~~~a~~~~~~~~~~~~-~~~~~----~-~~----~~~---~~~~~~~~~~~~~l~~l~e~~L~~~~~l 144 (221)
++ ++++|.++.+++++++|+.+.+.. .+.+. . .+ +.. +..+.....+.+.++.| |+.|++++|+
T Consensus 78 ~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l 156 (215)
T PLN02395 78 RSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLNLTLHILFASKMGFPADEKVIKESEEKLAKVLDVY-EARLSKSKYL 156 (215)
T ss_pred CCCCcCcCCCChhHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHH-HHHhcCCccc
Confidence 75 369999999999999999987654 22221 1 11 111 33455678899999999 9999988999
Q ss_pred ecCCCchhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcchhccCCC
Q 027575 145 HGDKIGSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPD 202 (221)
Q Consensus 145 ~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 202 (221)
+|+++|+||+++++++.++... . +. ......+|+|++|++++.++|++++++..
T Consensus 157 ~G~~~s~ADi~l~~~~~~~~~~--~-~~-~~~~~~~p~L~~w~~~~~~rp~~k~~~~~ 210 (215)
T PLN02395 157 AGDFVSLADLAHLPFTEYLVGP--I-GK-AYLIKDRKHVSAWWDDISSRPAWKEVLAK 210 (215)
T ss_pred cCCCcCHHHHHHHHHHHHHhcc--c-ch-hhhhccCchHHHHHHHHHcChHHHHHHHH
Confidence 9999999999999887776311 0 11 11135789999999999999999998754
No 6
>PRK10542 glutathionine S-transferase; Provisional
Probab=100.00 E-value=1.1e-34 Score=223.43 Aligned_cols=189 Identities=15% Similarity=0.312 Sum_probs=157.1
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccC-c-cCchHHHhhCCCCCcccEEEe-CCccccchHHHHHHHHhhCC
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFS-N-EKSALLLKYNPVHKKIPVLVH-GEKPVCDSMVILEYIEEMWP 80 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~-~-~~~~~~~~~~p~~g~vP~L~~-~~~~i~es~~I~~yL~~~~~ 80 (221)
|+||+.+.| ++++++++|+++||+|+.+.+++.. + ...++|+++||+ |+||+|++ ||.+|+||.+|++||+++++
T Consensus 1 m~l~~~~~s-~~~~~~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~nP~-g~vPvL~~~~g~~l~eS~aI~~YL~~~~~ 78 (201)
T PRK10542 1 MKLFYKPGA-CSLASHITLRESGLDFTLVSVDLAKKRLENGDDYLAINPK-GQVPALLLDDGTLLTEGVAIMQYLADSVP 78 (201)
T ss_pred CceeecccH-HHHHHHHHHHHcCCCceEEEeecccccccCChHHHHhCcC-CCCCeEEeCCCcEeecHHHHHHHHHHhCc
Confidence 689998866 7999999999999999999998863 2 356899999998 89999985 78899999999999999998
Q ss_pred CCCCC-CCCHHHHHHHHHHHHHhhhh-hhhHHhhcCCc---hHHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHH
Q 027575 81 QSPLM-PNDPYDRALARFWIKFGEDK-GVAVWKMFHSN---QDEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIA 155 (221)
Q Consensus 81 ~~~l~-p~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~ 155 (221)
+++++ |.++.+++++++|+.+..+. .+.+...+... +..+.....+.+.++.| |+.|++++|++|+++|+||++
T Consensus 79 ~~~l~~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~s~ADi~ 157 (201)
T PRK10542 79 DRQLLAPVGSLSRYHTIEWLNYIATELHKGFTPLFRPDTPEEYKPTVRAQLEKKFQYV-DEALADEQWICGQRFTIADAY 157 (201)
T ss_pred ccccCCCCCcHHHHHHHHHHHHHHhhhhhhhhhccCCCChHHHHHHHHHHHHHHHHHH-HHHhcCCCeeeCCCCcHHhHH
Confidence 77766 67888999999999888666 54444444322 22345677899999999 999998899999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcchhccCCC
Q 027575 156 FGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPD 202 (221)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 202 (221)
+++++.+.... +.+ ...+|+|.+|++++.++|+|++++.+
T Consensus 158 l~~~~~~~~~~----~~~---~~~~p~l~~w~~~~~~~p~~k~~~~~ 197 (201)
T PRK10542 158 LFTVLRWAYAV----KLN---LEGLEHIAAYMQRVAERPAVAAALKA 197 (201)
T ss_pred HHHHHHHhhcc----CCC---cccchHHHHHHHHHHcCHHHHHHHHH
Confidence 99988877321 322 35799999999999999999998754
No 7
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=100.00 E-value=6.7e-34 Score=221.95 Aligned_cols=195 Identities=19% Similarity=0.270 Sum_probs=158.9
Q ss_pred cCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhhCCC---CCCC
Q 027575 9 TLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEMWPQ---SPLM 85 (221)
Q Consensus 9 ~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~~~~---~~l~ 85 (221)
...||+|++++++|.++|++|+.+.+++. .++++|+++||. |+||||++||.+|+||.+|++||+++++. +++.
T Consensus 16 ~~~cp~~~rv~i~L~ekgi~~e~~~vd~~--~~~~~fl~inP~-g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~ 92 (236)
T TIGR00862 16 IGNCPFSQRLFMILWLKGVVFNVTTVDLK--RKPEDLQNLAPG-THPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLS 92 (236)
T ss_pred CCCCHhHHHHHHHHHHcCCCcEEEEECCC--CCCHHHHHHCcC-CCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCC
Confidence 46899999999999999999999999998 778999999998 89999999999999999999999999964 4567
Q ss_pred CCCHHHHHHHHHHHHHhhhhhhhHHhhcCCc--hHHHHHHHHHHHHHHHHHhcccC------------------CCCeee
Q 027575 86 PNDPYDRALARFWIKFGEDKGVAVWKMFHSN--QDEESRMKEILEMLQTIEEHGIG------------------EKKIFH 145 (221)
Q Consensus 86 p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~e~~L~------------------~~~~l~ 145 (221)
|+++..++.... .++.+..++... +..+.....+.+.+..| |++|. +++|+.
T Consensus 93 p~~~~~~~~~~~-------l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L-e~~L~~~~~~~~~~~~~~~~~~~~~~f~~ 164 (236)
T TIGR00862 93 PKHPESNTAGLD-------IFAKFSAYIKNSNPEANDNLEKGLLKALKKL-DDYLNSPLPEEIDEDSAEDEKVSRRKFLD 164 (236)
T ss_pred CCCHHHHHHHHH-------HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH-HHHHhccccccccccccccccccCCCccc
Confidence 777765553221 122222222222 33445566789999999 88886 579999
Q ss_pred cCCCchhHHHHHHHHHHHHHH-HHHhcccccCCCCCchHHHHHHHHhcCcchhccCCChhhHHHHHHHHHHh
Q 027575 146 GDKIGSLEIAFGSMLYWLQIL-EDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDRDGISLFFKRRREN 216 (221)
Q Consensus 146 G~~~t~aD~~l~~~l~~~~~~-~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 216 (221)
|+++|+|||++++.+.++..+ ....+.++ ..++|+|++|++++.++|+|+++++..+.+...+++..+.
T Consensus 165 Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~i--~~~~p~l~~w~~~~~~~~sf~~t~p~~~~i~~~~~~~~~~ 234 (236)
T TIGR00862 165 GDELTLADCNLLPKLHIVKVVAKKYRNFDI--PAEFTGVWRYLSNAYAREEFTNTCPDDKEIELAYADVAKR 234 (236)
T ss_pred CCccchhhHHHHHHHHHHHHHHHHHhCcCc--cccCchHHHHHHHHhccchHHhhCCChHHHHHHHHHHhhc
Confidence 999999999999999999764 33445555 5799999999999999999999999999999999887643
No 8
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=100.00 E-value=1.9e-34 Score=224.46 Aligned_cols=188 Identities=17% Similarity=0.276 Sum_probs=152.0
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccC-ccCchHHHhhCCCCCcccEEEe-----CC--ccccchHHHHHHH
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLVH-----GE--KPVCDSMVILEYI 75 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~~-----~~--~~i~es~~I~~yL 75 (221)
|+||+.+ +|++++|+++|+++||+|+.+.++... +...++|+++||+ |+||+|++ || .+|+||.+|++||
T Consensus 2 ~~Ly~~~-~~~~~~v~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~iNP~-gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL 79 (215)
T PRK13972 2 IDLYFAP-TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPN-NKIPAIVDHSPADGGEPLSLFESGAILLYL 79 (215)
T ss_pred eEEEECC-CCChHHHHHHHHHcCCCcEEEEecCcccccCCHHHHhhCcC-CCCCEEEeCCCCCCCCceeEEcHHHHHHHH
Confidence 7899887 799999999999999999999998864 5667899999998 89999997 45 3799999999999
Q ss_pred HhhCCCCCCCCCCHHHHHHHHHHHHHhhhh-hhhHHh--hcCC-----c-hHHHHHHHHHHHHHHHHHhcccCCCCeeec
Q 027575 76 EEMWPQSPLMPNDPYDRALARFWIKFGEDK-GVAVWK--MFHS-----N-QDEESRMKEILEMLQTIEEHGIGEKKIFHG 146 (221)
Q Consensus 76 ~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~-~~~~~~--~~~~-----~-~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G 146 (221)
+++++ .+.|.++.+++++++|+.+.... .+.+.. .+.. . ...+.....+.+.+..| |++|++++|++|
T Consensus 80 ~~~~~--~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G 156 (215)
T PRK13972 80 AEKTG--LFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVL-NKRLENSPWLGG 156 (215)
T ss_pred HHhcC--CCCCCCHHHHHHHHHHHHHHhhccCcceeeeeeeeccCCCCCchHHHHHHHHHHHHHHHH-HHHhccCccccC
Confidence 99985 47788999999999999888765 322211 1111 1 33455667788999999 999998899999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcchhccCCCh
Q 027575 147 DKIGSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDR 203 (221)
Q Consensus 147 ~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 203 (221)
+++|+|||++++.+.... .. + +....+|+|.+|++++.++|+|++++...
T Consensus 157 d~~t~ADi~l~~~~~~~~---~~-~---~~~~~~P~l~~w~~r~~~rp~~~~~~~~~ 206 (215)
T PRK13972 157 ENYSIADIACWPWVNAWT---RQ-R---IDLAMYPAVKNWHERIRSRPATGQALLKA 206 (215)
T ss_pred CCCCHHHHHHHHHHHHHh---hc-C---CcchhCHHHHHHHHHHHhCHHHHHHHHHh
Confidence 999999999988664332 11 2 22468999999999999999999877553
No 9
>PRK10357 putative glutathione S-transferase; Provisional
Probab=100.00 E-value=1.2e-33 Score=217.97 Aligned_cols=190 Identities=25% Similarity=0.321 Sum_probs=155.2
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEE-eCCccccchHHHHHHHHhhCCCC
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLV-HGEKPVCDSMVILEYIEEMWPQS 82 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~-~~~~~i~es~~I~~yL~~~~~~~ 82 (221)
|+||+++.||++++++++|+++|++|+.+.++.. ...+++.+.||+ |+||+|+ +||.+|+||.+|++||+++++++
T Consensus 1 ~~Ly~~~~s~~~~~v~~~L~~~gv~ye~~~~~~~--~~~~~~~~~nP~-g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~~ 77 (202)
T PRK10357 1 MKLIGSYTSPFVRKISILLLEKGITFEFVNELPY--NADNGVAQYNPL-GKVPALVTEEGECWFDSPIIAEYIELLNVAP 77 (202)
T ss_pred CeeecCCCCchHHHHHHHHHHcCCCCeEEecCCC--CCchhhhhcCCc-cCCCeEEeCCCCeeecHHHHHHHHHHhCCCC
Confidence 5899999999999999999999999999988876 556778889998 8999998 57899999999999999999877
Q ss_pred CCCCCCHHHHHHHHHHHHHhhhhhh-hH---HhhcCCc-----hHHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhH
Q 027575 83 PLMPNDPYDRALARFWIKFGEDKGV-AV---WKMFHSN-----QDEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLE 153 (221)
Q Consensus 83 ~l~p~~~~~~a~~~~~~~~~~~~~~-~~---~~~~~~~-----~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD 153 (221)
.++|.++.+++++++|..+.++... .+ ...+..+ +..+.....+.+.|+.| |++|++++ ++|+++|+||
T Consensus 78 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l-e~~L~~~~-l~Gd~~t~AD 155 (202)
T PRK10357 78 AMLPRDPLAALRVRQLEALADGIMDAALVSVREQARPAAQQSEDELLRQREKINRSLDAL-EGYLVDGT-LKTDTVNLAT 155 (202)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHHHH-HHhhccCc-ccCCCcCHHH
Confidence 8999999999999999877654421 11 1111111 23345678899999999 99998878 9999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcchhccCCC
Q 027575 154 IAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPD 202 (221)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 202 (221)
+++++.+.++... ..+......+|++.+|++++.++|+|+++.+.
T Consensus 156 i~l~~~l~~~~~~----~~~~~~~~~~p~l~~~~~~i~~rp~~~~~~~~ 200 (202)
T PRK10357 156 IAIACAVGYLNFR----RVAPGWCVDRPHLVKLVENLFQRESFARTEPP 200 (202)
T ss_pred HHHHHHHHHHHhc----ccCcchhhcChHHHHHHHHHhcChhhhhcCCC
Confidence 9999998877331 11111135789999999999999999998875
No 10
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=100.00 E-value=1e-33 Score=219.54 Aligned_cols=190 Identities=25% Similarity=0.382 Sum_probs=156.2
Q ss_pred EEeccCCChhHHHHHHHHHhhCCCceEEEcccc-C-ccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhhCCCC
Q 027575 5 KLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVF-S-NEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEMWPQS 82 (221)
Q Consensus 5 ~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~-~-~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~~~~~ 82 (221)
+||++..||+++++|++|.++||+|+.+.++.. . +...++++++||+ |+||+|++||.+|+||.+|++||++++++.
T Consensus 1 ~Ly~~~~s~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~nP~-g~vP~L~~~g~~l~ES~aI~~yl~~~~~~~ 79 (210)
T TIGR01262 1 KLYSYWRSSCSYRVRIALALKGIDYEYVPVNLLRDGEQRSPEFLALNPQ-GLVPTLDIDGEVLTQSLAIIEYLEETYPDP 79 (210)
T ss_pred CcccCCCCCchHHHHHHHHHCCCCceEEecccccccccCChhhhhcCCC-CcCCEEEECCEEeecHHHHHHHHHHhCCCC
Confidence 589999999999999999999999999999863 1 3467889999998 899999999999999999999999999887
Q ss_pred CCCCCCHHHHHHHHHHHHHhhhh-hhh----HHhhc----CCc-h-HHHHHHHHHHHHHHHHHhcccCC--CCeeecCCC
Q 027575 83 PLMPNDPYDRALARFWIKFGEDK-GVA----VWKMF----HSN-Q-DEESRMKEILEMLQTIEEHGIGE--KKIFHGDKI 149 (221)
Q Consensus 83 ~l~p~~~~~~a~~~~~~~~~~~~-~~~----~~~~~----~~~-~-~~~~~~~~~~~~l~~l~e~~L~~--~~~l~G~~~ 149 (221)
.++|+++.+++++++|+.+++.. .+. +...+ +.+ + ..+...+.+.+.|+.| |++|++ ++|++|+++
T Consensus 80 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~~~l~G~~~ 158 (210)
T TIGR01262 80 PLLPADPIKRARVRALALLIACDIHPLNNLRVLQYLREKLGVEEEARNRWYQHWISKGFAAL-EALLQPHAGAFCVGDTP 158 (210)
T ss_pred CCCCCCHHHHHHHHHHHHHHhcccChhhhhhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH-HHHHhcCCCCEeeCCCC
Confidence 89999999999999999887644 221 11111 122 2 2233456799999999 999975 569999999
Q ss_pred chhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcchhccCCCh
Q 027575 150 GSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDR 203 (221)
Q Consensus 150 t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 203 (221)
|+|||++++.+.++... +. ....+|+|++|+++|.++|+++++..+.
T Consensus 159 T~ADi~~~~~l~~~~~~----~~---~~~~~p~l~~~~~~~~~rp~~~~~~~~~ 205 (210)
T TIGR01262 159 TLADLCLVPQVYNAERF----GV---DLTPYPTLRRIAAALAALPAFQRAHPEN 205 (210)
T ss_pred CHHHHHHHHHHHHHHHc----CC---CcccchHHHHHHHHHhcCHHHHHhCccc
Confidence 99999999998876321 22 1358999999999999999999998753
No 11
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.6e-33 Score=218.64 Aligned_cols=185 Identities=32% Similarity=0.566 Sum_probs=155.6
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCc-cccchHHHHHHHHhhCCCC
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEK-PVCDSMVILEYIEEMWPQS 82 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~-~i~es~~I~~yL~~~~~~~ 82 (221)
|+||+.+.||+++++++++.++|++|+.+.|+...+.+.++|+..||. |+||+|+++|. +|+||.+|++||++++|++
T Consensus 1 ~~L~~~~~sp~~~kv~l~l~e~g~~ye~~~v~~~~~~~~~~~~~~nP~-gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~~ 79 (211)
T COG0625 1 MKLYGSPTSPYSRKVRLALEEKGLPYEIVLVDLDAEQKPPDFLALNPL-GKVPALVDDDGEVLTESGAILEYLAERYPGP 79 (211)
T ss_pred CeeecCCCCcchHHHHHHHHHcCCCceEEEeCcccccCCHHHHhcCCC-CCCCEEeeCCCCeeecHHHHHHHHHhhCCCC
Confidence 689999999999999999999999999999998743578999999998 89999998765 8999999999999999977
Q ss_pred CCCCCCHH---HHHHHHHHHHHhhhh-hhhHHhhc----CC----c-hHHHHHHHHHHHHHHHHHhcccCCCCeeecCCC
Q 027575 83 PLMPNDPY---DRALARFWIKFGEDK-GVAVWKMF----HS----N-QDEESRMKEILEMLQTIEEHGIGEKKIFHGDKI 149 (221)
Q Consensus 83 ~l~p~~~~---~~a~~~~~~~~~~~~-~~~~~~~~----~~----~-~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~ 149 (221)
+++|.++. +++....|+.+.... .+.+.... .. . ...+.....+.+.++.+ |..|++++|++|+++
T Consensus 80 ~l~p~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~ 158 (211)
T COG0625 80 PLLPADPLARRARALLLWWLFFAASDLHPVIGQRRRALLGSEPELLEAALEAARAEIRALLALL-EALLADGPYLAGDRF 158 (211)
T ss_pred CcCCCCchhHHHHHHHHHHHHHHHhcccHHHHHHHhhhccccccccHHHHHHHHHHHHHHHHHH-HHHhccCCcccCCCC
Confidence 79998884 788888999988666 44432211 11 1 34566788899999999 999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcchh
Q 027575 150 GSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIE 197 (221)
Q Consensus 150 t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 197 (221)
|+||+++++.+.++... +.+ ...+|++.+|++++.++|+++
T Consensus 159 tiAD~~~~~~~~~~~~~----~~~---~~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 159 TIADIALAPLLWRLALL----GEE---LADYPALKAWYERVLARPAFR 199 (211)
T ss_pred CHHHHHHHHHHHHhhhc----Ccc---cccChHHHHHHHHHHcCCchh
Confidence 99999999988886332 222 257999999999999999965
No 12
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.8e-34 Score=205.45 Aligned_cols=192 Identities=24% Similarity=0.397 Sum_probs=166.1
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCCceEEEccccC--ccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhhCC
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFS--NEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEMWP 80 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~--~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~~~ 80 (221)
+.+||++..|.+++|||++|+.+||+|+...|+..+ +....+|.++||. ++||+|++||.+|+||.||++||++.+|
T Consensus 5 KpiLYSYWrSSCswRVRiALaLK~iDYey~PvnLlk~~~q~~~ef~~iNPm-~kVP~L~i~g~tl~eS~AII~YLeEt~P 83 (217)
T KOG0868|consen 5 KPILYSYWRSSCSWRVRIALALKGIDYEYKPVNLLKEEDQSDSEFKEINPM-EKVPTLVIDGLTLTESLAIIEYLEETYP 83 (217)
T ss_pred cchhhhhhcccchHHHHHHHHHcCCCcceeehhhhcchhhhhhHHhhcCch-hhCCeEEECCEEeehHHHHHHHHHhcCC
Confidence 688999999999999999999999999999999875 4456799999999 8999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhhh---hhH--HhhcCCc---hHHHHHHHHHHHHHHHHHhcccC--CCCeeecCCCc
Q 027575 81 QSPLMPNDPYDRALARFWIKFGEDKG---VAV--WKMFHSN---QDEESRMKEILEMLQTIEEHGIG--EKKIFHGDKIG 150 (221)
Q Consensus 81 ~~~l~p~~~~~~a~~~~~~~~~~~~~---~~~--~~~~~~~---~~~~~~~~~~~~~l~~l~e~~L~--~~~~l~G~~~t 150 (221)
+++|+|+|+..|+..+++...+.... +.+ ...++++ .....+...+.+.+..| |+.|. .|.|.+||++|
T Consensus 84 ~ppLLP~d~~KRA~~r~i~~~i~sgIQPlQNl~vl~~l~ek~~~~~~~W~q~~ItkGF~AL-EklL~~~aGkycvGDevt 162 (217)
T KOG0868|consen 84 DPPLLPKDPHKRAKARAISLLIASGIQPLQNLSVLKMLNEKEPGYGDQWAQHFITKGFTAL-EKLLKSHAGKYCVGDEVT 162 (217)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHhCCCcchhhHHHHHhcccccchhhHHHHHHHHHhHHHH-HHHHHHccCCcccCceee
Confidence 99999999999999999998888773 333 3445544 23566778899999999 99995 57899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcchhccCCCh
Q 027575 151 SLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDR 203 (221)
Q Consensus 151 ~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 203 (221)
+||+++.+.++....+ . ++...||.+.+..+.+...|.|+.+.++.
T Consensus 163 iADl~L~pqv~nA~rf----~---vdl~PYPti~ri~e~l~elpaFq~ahP~n 208 (217)
T KOG0868|consen 163 IADLCLPPQVYNANRF----H---VDLTPYPTITRINEELAELPAFQAAHPDN 208 (217)
T ss_pred hhhhccchhhhhhhhc----c---ccCCcCchHHHHHHHHHhCHHHHhcCCCC
Confidence 9999999987776332 3 33578999999999999999999988763
No 13
>PRK11752 putative S-transferase; Provisional
Probab=100.00 E-value=2.7e-33 Score=223.87 Aligned_cols=197 Identities=17% Similarity=0.228 Sum_probs=156.4
Q ss_pred ceEEeccCCChhHHHHHHHHHhh------CCCceEEEccccC-ccCchHHHhhCCCCCcccEEEeC----CccccchHHH
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLK------GVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLVHG----EKPVCDSMVI 71 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~------gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~~~----~~~i~es~~I 71 (221)
.|+||+.+ ||+|+||+++|.++ |++|+.+.|+... +...++|+++||. |+||+|+++ |.+|+||.+|
T Consensus 44 ~~~Ly~~~-s~~~~rV~i~L~e~~~~~~~gl~ye~~~v~~~~~~~~~~e~~~iNP~-GkVP~Lv~~dg~~~~~L~ES~AI 121 (264)
T PRK11752 44 PLQLYSLG-TPNGQKVTIMLEELLALGVKGAEYDAWLIRIGEGDQFSSGFVEINPN-SKIPALLDRSGNPPIRVFESGAI 121 (264)
T ss_pred CeEEecCC-CCchHHHHHHHHHHHhccCCCCceEEEEecCccccccCHHHHhhCCC-CCCCEEEeCCCCCCeEEEcHHHH
Confidence 48999975 99999999999997 8999999998865 5678899999998 899999984 3589999999
Q ss_pred HHHHHhhCCCCCCCCCCHHHHHHHHHHHHHhhhhhhh----HHhhc--CCc---hHHHHHHHHHHHHHHHHHhcccCCCC
Q 027575 72 LEYIEEMWPQSPLMPNDPYDRALARFWIKFGEDKGVA----VWKMF--HSN---QDEESRMKEILEMLQTIEEHGIGEKK 142 (221)
Q Consensus 72 ~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~----~~~~~--~~~---~~~~~~~~~~~~~l~~l~e~~L~~~~ 142 (221)
++||++.++ +|+|.++.+++++++|+.+.....+. +...+ ... ...++...++.+.|+.| |++|++++
T Consensus 122 l~YL~~~~~--~L~P~~~~era~v~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l-e~~L~~~~ 198 (264)
T PRK11752 122 LLYLAEKFG--AFLPKDLAARTETLNWLFWQQGSAPFLGGGFGHFYAYAPEKIEYAINRFTMEAKRQLDVL-DKQLAEHE 198 (264)
T ss_pred HHHHHHhcC--CcCCCCHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHH-HHHhccCC
Confidence 999999987 49999999999999999887654221 11112 111 23355567789999999 99999889
Q ss_pred eeecCCCchhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcchhccCCChh
Q 027575 143 IFHGDKIGSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDRD 204 (221)
Q Consensus 143 ~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 204 (221)
||+|+++|+|||++++.+.++.........+......+|++.+|+++|.++|+|+++.....
T Consensus 199 fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs~k~~~~~~~ 260 (264)
T PRK11752 199 YIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPAVKRGRIVNR 260 (264)
T ss_pred CCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHHHHHHHhccc
Confidence 99999999999999988877632100001111224679999999999999999999887654
No 14
>PLN02378 glutathione S-transferase DHAR1
Probab=100.00 E-value=7.6e-32 Score=209.43 Aligned_cols=186 Identities=21% Similarity=0.358 Sum_probs=145.3
Q ss_pred cCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhhCCCCCCCCCC
Q 027575 9 TLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEMWPQSPLMPND 88 (221)
Q Consensus 9 ~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~~~~~~l~p~~ 88 (221)
...||||+|++++|+++|++|+.+.+++. .++++|+++||+ |+||+|++||.+|+||.+|++||++++++..+ .+
T Consensus 17 ~~~~p~~~rv~~~L~e~gl~~e~~~v~~~--~~~~~~l~inP~-G~VPvL~~~~~~l~ES~aI~~YL~~~~~~~~l--~~ 91 (213)
T PLN02378 17 LGDCPFSQRALLTLEEKSLTYKIHLINLS--DKPQWFLDISPQ-GKVPVLKIDDKWVTDSDVIVGILEEKYPDPPL--KT 91 (213)
T ss_pred CCCCcchHHHHHHHHHcCCCCeEEEeCcc--cCCHHHHHhCCC-CCCCEEEECCEEecCHHHHHHHHHHhCCCCCC--CC
Confidence 45699999999999999999999999987 778899999998 99999999999999999999999999987655 35
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHhcccC--CCCeeecCCCchhHHHHHHHHHHHHHH
Q 027575 89 PYDRALARFWIKFGEDKGVAVWKMFHSNQDEESRMKEILEMLQTIEEHGIG--EKKIFHGDKIGSLEIAFGSMLYWLQIL 166 (221)
Q Consensus 89 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~e~~L~--~~~~l~G~~~t~aD~~l~~~l~~~~~~ 166 (221)
+.+++.+...+. ..+..++......+.....+.+.|+.| |+.|+ +++|++|+++|+||+++++.+.++...
T Consensus 92 ~~~~a~i~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~ 164 (213)
T PLN02378 92 PAEFASVGSNIF------GTFGTFLKSKDSNDGSEHALLVELEAL-ENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVA 164 (213)
T ss_pred HHHHHHHHHHHH------HHHHHHHhcCChhhHHHHHHHHHHHHH-HHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHH
Confidence 667776554321 222222222211223346778889999 99997 578999999999999999998887432
Q ss_pred HH-HhcccccCCCCCchHHHHHHHHhcCcchhccCCChhhHHH
Q 027575 167 ED-IVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDRDGISL 208 (221)
Q Consensus 167 ~~-~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~ 208 (221)
.. ..+.+. ...+|++++|++++.++|++++++...+...+
T Consensus 165 ~~~~~~~~~--~~~~p~l~~w~~~~~~rpa~~~~~~~~~~~~~ 205 (213)
T PLN02378 165 LGHFKSWSV--PESFPHVHNYMKTLFSLDSFEKTKTEEKYVIS 205 (213)
T ss_pred HHHhcCCCc--hhHhHHHHHHHHHHhcCCCeecccCChHHHHH
Confidence 22 111122 35899999999999999999999988766544
No 15
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=100.00 E-value=1.9e-31 Score=212.44 Aligned_cols=188 Identities=23% Similarity=0.368 Sum_probs=147.8
Q ss_pred CCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhhCCCCCCCCCCH
Q 027575 10 LPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEMWPQSPLMPNDP 89 (221)
Q Consensus 10 ~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~~~~~~l~p~~~ 89 (221)
..||||+|++++|+++|++|+.+.++.. .++++|+++||. |+||+|+++|.+|+||.+|++||+++++++.+. ++
T Consensus 71 g~cp~s~rV~i~L~ekgi~ye~~~vdl~--~~~~~fl~iNP~-GkVPvL~~d~~~L~ES~aI~~YL~e~~p~~~L~--~~ 145 (265)
T PLN02817 71 GDCPFCQRVLLTLEEKHLPYDMKLVDLT--NKPEWFLKISPE-GKVPVVKLDEKWVADSDVITQALEEKYPDPPLA--TP 145 (265)
T ss_pred CCCcHHHHHHHHHHHcCCCCEEEEeCcC--cCCHHHHhhCCC-CCCCEEEECCEEEecHHHHHHHHHHHCCCCCCC--CH
Confidence 4599999999999999999999999987 788999999998 899999999999999999999999999877663 56
Q ss_pred HHHHHHHHHHHHhhhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHhcccC-CCCeeecCCCchhHHHHHHHHHHHHHHHH
Q 027575 90 YDRALARFWIKFGEDKGVAVWKMFHSNQDEESRMKEILEMLQTIEEHGIG-EKKIFHGDKIGSLEIAFGSMLYWLQILED 168 (221)
Q Consensus 90 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~e~~L~-~~~~l~G~~~t~aD~~l~~~l~~~~~~~~ 168 (221)
.+++.+.+++. ..+..++......+.....+.+.++.| |++|+ +++|++|+++|+|||++++.+.++.....
T Consensus 146 ~era~i~~~l~------~~~~~~~~~~~~~~~~~~~l~~~l~~L-E~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~ 218 (265)
T PLN02817 146 PEKASVGSKIF------STFIGFLKSKDPGDGTEQALLDELTSF-DDYIKENGPFINGEKISAADLSLGPKLYHLEIALG 218 (265)
T ss_pred HHHHHHHHHHH------HHHHHHhccCCcchHHHHHHHHHHHHH-HHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 78888776542 112222222211122345678889999 99997 47999999999999999999888754322
Q ss_pred -HhcccccCCCCCchHHHHHHHHhcCcchhccCCChhhHHHHHH
Q 027575 169 -IVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDRDGISLFFK 211 (221)
Q Consensus 169 -~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 211 (221)
..+.++ ...+|++++|++++.++|+|+++.+..+++.....
T Consensus 219 ~~~~~~i--~~~~P~L~~w~~ri~~rps~~~~~~~~~~~~~~~~ 260 (265)
T PLN02817 219 HYKNWSV--PDSLPFVKSYMKNIFSMESFVKTRALPEDVIAGWR 260 (265)
T ss_pred HhcCCCc--cccCHHHHHHHHHHhcchhHhhcCCCHHHHHHHhH
Confidence 112222 36899999999999999999999998776655443
No 16
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=6.1e-31 Score=205.47 Aligned_cols=197 Identities=25% Similarity=0.384 Sum_probs=168.5
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccC-ccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhhCC-C
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEMWP-Q 81 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~~~-~ 81 (221)
|+||+++.||.|+++.+++.++|++|+.+.++... ++++++|+++||+ |+||+|++||..++||.||+.||.++|. .
T Consensus 3 ~~ly~~~~s~~~r~vl~~~~~~~l~~e~~~v~~~~ge~~~pefl~~nP~-~kVP~l~d~~~~l~eS~AI~~Yl~~ky~~~ 81 (226)
T KOG0867|consen 3 LKLYGHLGSPPARAVLIAAKELGLEVELKPVDLVKGEQKSPEFLKLNPL-GKVPALEDGGLTLWESHAILRYLAEKYGPL 81 (226)
T ss_pred ceEeecCCCcchHHHHHHHHHcCCceeEEEeeccccccCCHHHHhcCcC-CCCCeEecCCeEEeeHHHHHHHHHHHcCCC
Confidence 89999999999999999999999999999999887 8999999999999 8999999999999999999999999996 3
Q ss_pred CC-CCCCCHHHHHHHHHHHHHhhhh-hhh--HH----h-hcCCc---hHHHHHHHHHHHHHHHHHhcccCCCCeeecCCC
Q 027575 82 SP-LMPNDPYDRALARFWIKFGEDK-GVA--VW----K-MFHSN---QDEESRMKEILEMLQTIEEHGIGEKKIFHGDKI 149 (221)
Q Consensus 82 ~~-l~p~~~~~~a~~~~~~~~~~~~-~~~--~~----~-~~~~~---~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~ 149 (221)
.. ++|.++.+++.+++|+.+.++. .+. .. + .++.+ ...++....+.+.++.+ |.+|.++.|+.|+++
T Consensus 82 ~~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-e~~l~~~~yl~g~~~ 160 (226)
T KOG0867|consen 82 GGILLPKDLKERAIVDQWLEFENGVLDPVTFERPILAPLLVGLPLNPTAVKELEAKLRKALDNL-ERFLKTQVYLAGDQL 160 (226)
T ss_pred CcccCCcCHHHHHHHHHHHHhhhcccccccccceeeecceecccCcchhhHHHHHHHHHHHHHH-HHHHccCCcccCCcc
Confidence 34 8999999999999999888877 333 22 2 33332 56678899999999999 999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcchhccCCChhhH
Q 027575 150 GSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDRDGI 206 (221)
Q Consensus 150 t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~ 206 (221)
|+||+.+.+.+..+.. ... .. ....++|++.+|++++.++|.+++........
T Consensus 161 tlADl~~~~~~~~~~~-~~~-~~--~~~~~~p~v~~W~~~~~~~P~~~e~~~~~~~~ 213 (226)
T KOG0867|consen 161 TLADLSLASTLSQFQG-KFA-TE--KDFEKYPKVARWYERIQKRPAYEEANEKGAAP 213 (226)
T ss_pred cHHHHHHhhHHHHHhH-hhh-hh--hhhhhChHHHHHHHHHHhCccHHHHHHHHHHH
Confidence 9999999998888742 111 11 23679999999999999999988876654443
No 17
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.97 E-value=5.2e-31 Score=203.66 Aligned_cols=192 Identities=15% Similarity=0.144 Sum_probs=141.3
Q ss_pred Cc-ceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCcc--CchHHH--hhCCCCCcccEEEeCCccccchHHHHHHH
Q 027575 1 MA-EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNE--KSALLL--KYNPVHKKIPVLVHGEKPVCDSMVILEYI 75 (221)
Q Consensus 1 M~-~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~--~~~~~~--~~~p~~g~vP~L~~~~~~i~es~~I~~yL 75 (221)
|+ +++||+++.+++++++|++|+++|++|+.+.++...+. ..+++. +.||+ |+||+|++||.+|+||.+|++||
T Consensus 1 m~~~~~L~y~~~~~~~~~vrl~L~~~gi~ye~~~~~~~~~~~~~~~~~~~~~~nP~-g~vP~L~~~~~~l~eS~AI~~YL 79 (205)
T PTZ00057 1 MAEEIVLYYFDARGKAELIRLIFAYLGIEYTDKRFGENGDAFIEFKNFKKEKDTPF-EQVPILEMDNIIFAQSQAIVRYL 79 (205)
T ss_pred CCCceEEEecCCCcchHHHHHHHHHcCCCeEEEeccccchHHHHHHhccccCCCCC-CCCCEEEECCEEEecHHHHHHHH
Confidence 66 68999999999999999999999999999977431000 011222 48999 89999999999999999999999
Q ss_pred HhhCCCCCCCCCCHHHHHHHHHHHHHhhhhhhhHHh--hcCCchHHHHHHHHHHHHHHHHHhcccCC--CCeeecCCCch
Q 027575 76 EEMWPQSPLMPNDPYDRALARFWIKFGEDKGVAVWK--MFHSNQDEESRMKEILEMLQTIEEHGIGE--KKIFHGDKIGS 151 (221)
Q Consensus 76 ~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~l~e~~L~~--~~~l~G~~~t~ 151 (221)
+++++ +.+.+..+++.+..+.....+....+.. .+. .+..+...+.+.+.+..| |+.|++ ++|++|+++|+
T Consensus 80 a~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l-e~~L~~~~~~~l~Gd~~T~ 154 (205)
T PTZ00057 80 SKKYK---ICGESELNEFYADMIFCGVQDIHYKFNNTNLFK-QNETTFLNEELPKWSGYF-ENILKKNHCNYFVGDNLTY 154 (205)
T ss_pred HHHcC---CCCCCHHHHHHHHHHHHHHHHHHHHHhhhHHHH-HHHHHHHHHHHHHHHHHH-HHHHHhCCCCeeeCCcccH
Confidence 99997 5566655555554433322222221211 111 122344567899999999 999964 38999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcchhccCCChh
Q 027575 152 LEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDRD 204 (221)
Q Consensus 152 aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 204 (221)
||+++++.+.++.... + .....+|+|.+|++++.++|++++++.++.
T Consensus 155 AD~~l~~~~~~~~~~~---~---~~l~~~P~l~~~~~r~~~~P~~k~y~~~~~ 201 (205)
T PTZ00057 155 ADLAVFNLYDDIETKY---P---NSLKNFPLLKAHNEFISNLPNIKNYISNRK 201 (205)
T ss_pred HHHHHHHHHHHHHHhC---h---hhhccChhHHHHHHHHHhChHHHHHHHhCC
Confidence 9999999888764211 2 113589999999999999999999987654
No 18
>PRK10387 glutaredoxin 2; Provisional
Probab=99.97 E-value=1.6e-29 Score=196.06 Aligned_cols=176 Identities=18% Similarity=0.224 Sum_probs=134.9
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEE-eCCccccchHHHHHHHHhhCCCC
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLV-HGEKPVCDSMVILEYIEEMWPQS 82 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~-~~~~~i~es~~I~~yL~~~~~~~ 82 (221)
|+||+++.||+|++++++|.++||+|+.+.++.. ... .-.+.||. |+||+|+ +||.+|+||.+|++||+++|+++
T Consensus 1 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~~~~~--~~~-~~~~~~p~-~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~~ 76 (210)
T PRK10387 1 MKLYIYDHCPFCVKARMIFGLKNIPVELIVLAND--DEA-TPIRMIGQ-KQVPILQKDDGSYMPESLDIVHYIDELDGKP 76 (210)
T ss_pred CEEEeCCCCchHHHHHHHHHHcCCCeEEEEcCCC--chh-hHHHhcCC-cccceEEecCCeEecCHHHHHHHHHHhCCCc
Confidence 6899999999999999999999999999988654 211 22578998 8999995 78899999999999999999865
Q ss_pred CCCCCCHHHHHHHHHHHHHhhhh-hhhHHhhcC--------Cch---------------------HHHHHHHHHHHHHHH
Q 027575 83 PLMPNDPYDRALARFWIKFGEDK-GVAVWKMFH--------SNQ---------------------DEESRMKEILEMLQT 132 (221)
Q Consensus 83 ~l~p~~~~~~a~~~~~~~~~~~~-~~~~~~~~~--------~~~---------------------~~~~~~~~~~~~l~~ 132 (221)
.+.+ .+++.+++|+.+.... ...+...+. ... ..++....+.+.|+.
T Consensus 77 ~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (210)
T PRK10387 77 LLTG---KRSPAIEEWLRKVFGYLNKLLYPRFAKADLPEFATPSARQYFIDKKEASIGDFDALLAHTPGLIKEINADLRA 153 (210)
T ss_pred cCCC---cccHHHHHHHHHHHHHhhcchhcccccCCCcccCCHHHHHHHHHhHHhccCCHHHHHhcCHHHHHHHHHHHHH
Confidence 5532 2567788887766544 222211110 000 013456789999999
Q ss_pred HHhcccCCCCeeecCCCchhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcch
Q 027575 133 IEEHGIGEKKIFHGDKIGSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVI 196 (221)
Q Consensus 133 l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 196 (221)
| |.+|++ +|++|+++|+||+++++.+.++... .+ + ..+|++.+|++||.++|.+
T Consensus 154 l-e~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~---~~---~--~~~p~l~~w~~r~~~r~~~ 207 (210)
T PRK10387 154 L-DPLIVK-PNAVNGELSTDDIHLFPILRNLTLV---KG---I--EWPPRVADYRDNMSKKTQV 207 (210)
T ss_pred H-HHHhcC-ccccCCCCCHHHHHHHHHHhcceee---cC---C--CCCHHHHHHHHHHHHHhCC
Confidence 9 999987 9999999999999999999888432 02 1 1359999999999999876
No 19
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=1.8e-27 Score=180.55 Aligned_cols=192 Identities=19% Similarity=0.206 Sum_probs=157.7
Q ss_pred CcceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhhCC
Q 027575 1 MAEVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEMWP 80 (221)
Q Consensus 1 M~~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~~~ 80 (221)
|.+++|+|++..++++.+|++++..|++|+...++.. +....+....|+ |++|+|..||..|.+|.+|++||.++++
T Consensus 1 m~~ykL~Yf~~RG~ae~iR~lf~~a~v~fEd~r~~~~--~~w~~~K~~~pf-gqlP~l~vDg~~i~QS~AI~RyLArk~g 77 (206)
T KOG1695|consen 1 MPPYKLTYFNIRGLAEPIRLLFAYAGVSFEDKRITME--DAWEELKDKMPF-GQLPVLEVDGKKLVQSRAILRYLARKFG 77 (206)
T ss_pred CCceEEEecCcchhHHHHHHHHHhcCCCcceeeeccc--cchhhhcccCCC-CCCCEEeECCEeeccHHHHHHHHHHHhC
Confidence 7789999999999999999999999999999999876 334556666899 8999999999999999999999999998
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhhhhh-HHhhcC-----Cc-hHHH-HHHHHHHHHHHHHHhcccC--CCCeeecCCCc
Q 027575 81 QSPLMPNDPYDRALARFWIKFGEDKGVA-VWKMFH-----SN-QDEE-SRMKEILEMLQTIEEHGIG--EKKIFHGDKIG 150 (221)
Q Consensus 81 ~~~l~p~~~~~~a~~~~~~~~~~~~~~~-~~~~~~-----~~-~~~~-~~~~~~~~~l~~l~e~~L~--~~~~l~G~~~t 150 (221)
+.++++.+.++++.+.+.+.+.+.. +...+. .. ...+ .......+.+..+ ++.|. ++.||+|+++|
T Consensus 78 ---l~Gkt~~E~a~vD~i~d~~~D~~~~~~~~~~~~~~~g~~~~~~~~~~~Pa~~~~~~~~-~~~L~~~~sgflvGd~lT 153 (206)
T KOG1695|consen 78 ---LAGKTEEEEAWVDMIVDQFKDFRWEIFRQPYTAPEAGKSEEELDKLYLPAKPKYFKIL-EKILKKNKSGFLVGDKLT 153 (206)
T ss_pred ---cCCCCHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhccchhhhhhhhccchHHHHHHH-HHHHHhCCCCeeecCccc
Confidence 9999999999999999988888333 332222 11 1111 4566777888888 88897 55799999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcchhccCCChh
Q 027575 151 SLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDRD 204 (221)
Q Consensus 151 ~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 204 (221)
+||+.++..+..+... ...+. ...+|+++++.+++.++|.+++++..+.
T Consensus 154 ~aDl~i~e~l~~l~~~---~~~~~--~~~~P~L~a~~~kv~~~p~ik~~i~~r~ 202 (206)
T KOG1695|consen 154 WADLVIAEHLDTLEEL---LDPSA--LDHFPKLKAFKERVSSIPNIKKYLESRP 202 (206)
T ss_pred HHHHHHHHHHHHHHHh---cCchh--hccChHHHHHHHHHhcCchHHHHHhcCC
Confidence 9999999998888542 12222 3578999999999999999999887653
No 20
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.95 E-value=1.5e-27 Score=184.82 Aligned_cols=174 Identities=17% Similarity=0.242 Sum_probs=130.4
Q ss_pred EEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEE-eCCccccchHHHHHHHHhhCCCCC
Q 027575 5 KLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLV-HGEKPVCDSMVILEYIEEMWPQSP 83 (221)
Q Consensus 5 ~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~-~~~~~i~es~~I~~yL~~~~~~~~ 83 (221)
+||++..||||+|+|++|.++|++|+.+.++.. . .....+.||. |+||+|+ +||.+|+||.+|++||+++++.+.
T Consensus 1 ~Ly~~~~sp~~~kvr~~L~~~gl~~e~~~~~~~--~-~~~~~~~np~-g~vP~l~~~~g~~l~es~~I~~yL~~~~~~~~ 76 (209)
T TIGR02182 1 KLYIYDHCPFCVRARMIFGLKNIPVEKHVLLND--D-EETPIRMIGA-KQVPILQKDDGRAMPESLDIVAYFDKLDGEPL 76 (209)
T ss_pred CeecCCCCChHHHHHHHHHHcCCCeEEEECCCC--c-chhHHHhcCC-CCcceEEeeCCeEeccHHHHHHHHHHhCCCcc
Confidence 689999999999999999999999999877543 2 2234789998 8999998 788999999999999999997644
Q ss_pred CCCCCHHHHHHHHHHHHHhhhh-hhhHHhhcCC-----------------c-hH-----------HHHHHHHHHHHHHHH
Q 027575 84 LMPNDPYDRALARFWIKFGEDK-GVAVWKMFHS-----------------N-QD-----------EESRMKEILEMLQTI 133 (221)
Q Consensus 84 l~p~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~-----------------~-~~-----------~~~~~~~~~~~l~~l 133 (221)
+.|. +++++++|+.++... ...+.+.+.. + +. .++....+.+.|+.+
T Consensus 77 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l 153 (209)
T TIGR02182 77 LTGK---VSPEIEAWLRKVTGYANKLLLPRFAKSDLPEFATQSARKYFTDKKEASAGNFSALLNHTPGLLEEINADLEEL 153 (209)
T ss_pred CCCC---ChHHHHHHHHHHHHHhhhhhccccccCCCcccCCHHHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHHHH
Confidence 4332 455667777655444 1122111100 0 00 135567889999999
Q ss_pred HhcccCCCCeeecCCCchhHHHHHHHHHHHHHHHHHhcccccCCCCCc-hHHHHHHHHhcCcch
Q 027575 134 EEHGIGEKKIFHGDKIGSLEIAFGSMLYWLQILEDIVGVKLFDSHKFP-GLHAWFENFKKAPVI 196 (221)
Q Consensus 134 ~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~p~~ 196 (221)
|++|++++|++| ++|+||+++++.+.++... + ...+| ++.+|++||.+++++
T Consensus 154 -e~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~----~-----~~~~p~~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 154 -DKLIDGPNAVNG-ELSEDDILVFPLLRNLTLV----A-----GINWPSRVADYLDNMSKKSKV 206 (209)
T ss_pred -HHHHhCccccCC-CCCHHHHHHHHHhcCeeee----c-----CCCCChHHHHHHHHHHHHhCC
Confidence 999999999955 6999999999998887321 1 11356 999999999998875
No 21
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.94 E-value=8.4e-26 Score=171.97 Aligned_cols=202 Identities=19% Similarity=0.293 Sum_probs=149.2
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCCceEEEccccC-ccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhhC-C
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEMW-P 80 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~~-~ 80 (221)
++.||.++.|--+|+||++++++||+|+...|++.. ++..+||...||. |.||||++|+.+|+++..|++|++++| +
T Consensus 26 ~~vLyhhpysf~sQkVrlvi~EK~id~~~y~V~l~~geh~epwFmrlNp~-gevPVl~~g~~II~d~tqIIdYvErtf~g 104 (325)
T KOG4420|consen 26 SLVLYHHPYSFSSQKVRLVIAEKGIDCEEYDVSLPQGEHKEPWFMRLNPG-GEVPVLIHGDNIISDYTQIIDYVERTFTG 104 (325)
T ss_pred cceeeecCcccccceeeeehhhcccccceeeccCccccccCchheecCCC-CCCceEecCCeecccHHHHHHHHHHhhcc
Confidence 488999999999999999999999999999999987 8899999999997 999999999999999999999999999 5
Q ss_pred CCCCCCC-CHHHHHHHHHHHHHhhhh--------------------hhhHH---hhcCC-------------c-------
Q 027575 81 QSPLMPN-DPYDRALARFWIKFGEDK--------------------GVAVW---KMFHS-------------N------- 116 (221)
Q Consensus 81 ~~~l~p~-~~~~~a~~~~~~~~~~~~--------------------~~~~~---~~~~~-------------~------- 116 (221)
+..|.|. +..+..++.+.....+.. .|..+ ..... +
T Consensus 105 er~l~pe~~S~~~d~~l~~e~~l~~lpm~~~t~g~~lh~eL~~~s~iP~~~~iR~~~~k~~~~v~~l~~~e~pdla~ay~ 184 (325)
T KOG4420|consen 105 ERVLMPEVGSLQHDRVLQYEELLDALPMDAYTHGCILHPELTTDSMIPKYAEIRRHLAKATTDVMKLDHEEEPDLAEAYL 184 (325)
T ss_pred cccccccccccccHHHHHHHHHHHhcCcchhhccccccchhhccccCcccHHHHHHHHHHHHHHHHHHhhcCchhhHHHH
Confidence 5678885 222333332222211100 11111 10000 0
Q ss_pred ----------------hHHHHHHHHHHHHHHHHHhcccCC----CCeeecCCCchhHHHHHHHHHHHHHHHHHhccc--c
Q 027575 117 ----------------QDEESRMKEILEMLQTIEEHGIGE----KKIFHGDKIGSLEIAFGSMLYWLQILEDIVGVK--L 174 (221)
Q Consensus 117 ----------------~~~~~~~~~~~~~l~~l~e~~L~~----~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~--~ 174 (221)
....+...++...|+.. |.-|.+ ..||+|+.+|+||+.+.+.|+++... |.+ .
T Consensus 185 akqkkl~~kl~~hdd~s~lkkild~l~~~Ld~V-EteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~L----g~e~~y 259 (325)
T KOG4420|consen 185 AKQKKLMAKLLEHDDVSYLKKILDELAMVLDQV-ETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFL----GLEKKY 259 (325)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH-HHHHhhccccceeeccccchHHHHHHHHHHHHHHHc----ccHHHh
Confidence 01122344555566666 555544 67999999999999999999999654 331 2
Q ss_pred cCCCCCchHHHHHHHHhcCcchhccCCChhhHHHHH
Q 027575 175 FDSHKFPGLHAWFENFKKAPVIEENLPDRDGISLFF 210 (221)
Q Consensus 175 ~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~ 210 (221)
...+..||+..|++|+++|++|++++++-.++..+.
T Consensus 260 w~~gsrpnle~Yf~rvrrR~sf~kvlg~~fnilr~~ 295 (325)
T KOG4420|consen 260 WEDGSRPNLESYFERVRRRFSFRKVLGDIFNILRFR 295 (325)
T ss_pred cccCCCccHHHHHHHHHhhhHHHHhhhhHHHHHHHH
Confidence 235689999999999999999999998876665533
No 22
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.92 E-value=5.5e-24 Score=157.71 Aligned_cols=195 Identities=23% Similarity=0.321 Sum_probs=158.2
Q ss_pred cCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhhCCCCCCCCCC
Q 027575 9 TLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEMWPQSPLMPND 88 (221)
Q Consensus 9 ~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~~~~~~l~p~~ 88 (221)
...||+|+++.+.|..+|++|..+.||+. .+++||+++.|. |++|+|..|+..++||..|.++|++.++.+++---+
T Consensus 18 ~Gdcpf~qr~~m~L~~k~~~f~vttVd~~--~kp~~f~~~sp~-~~~P~l~~d~~~~tDs~~Ie~~Lee~l~~p~~~~~~ 94 (221)
T KOG1422|consen 18 LGDCPFCQRLFMTLELKGVPFKVTTVDLS--RKPEWFLDISPG-GKPPVLKFDEKWVTDSDKIEEFLEEKLPPPKLPTLA 94 (221)
T ss_pred CCCChhHHHHHHHHHHcCCCceEEEeecC--CCcHHHHhhCCC-CCCCeEEeCCceeccHHHHHHHHHHhcCCCCCcccC
Confidence 35699999999999999999999999998 899999999996 999999999999999999999999999865442211
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHhhcCCc-h-HHHHHHHHHHHHHHHHHhcccCC---CCeeecCCCchhHHHHHHHHHHH
Q 027575 89 PYDRALARFWIKFGEDKGVAVWKMFHSN-Q-DEESRMKEILEMLQTIEEHGIGE---KKIFHGDKIGSLEIAFGSMLYWL 163 (221)
Q Consensus 89 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~l~~l~e~~L~~---~~~l~G~~~t~aD~~l~~~l~~~ 163 (221)
+ .+..+...+.+..+..++... + ..+.....+.+.|..| +++|+. ++|+.|+++|.|||.+++-|+.+
T Consensus 95 ~------~E~asag~diF~kF~~fi~ksk~~~n~~~e~~Ll~~L~~L-d~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i 167 (221)
T KOG1422|consen 95 P------PESASAGSDIFAKFSAFIKKSKDAANDGLEKALLKELEKL-DDYLKSPSRRKFLDGDKLTLADCSLLPKLHHI 167 (221)
T ss_pred C------HHHHhhHHHHHHHHHHHHhCchhhccchHHHHHHHHHHHH-HHHhcCccCCccccCCeeeeehhhhchhHHHH
Confidence 2 122223333355565565443 3 3344567888999999 999974 78999999999999999999999
Q ss_pred HHHHHH-hcccccCCCCCchHHHHHHHHhcCcchhccCCChhhHHHHHHHHHH
Q 027575 164 QILEDI-VGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDRDGISLFFKRRRE 215 (221)
Q Consensus 164 ~~~~~~-~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 215 (221)
++...+ .+.++ .++++.+++|+..+.++.+|..++++.+.+...++...+
T Consensus 168 ~va~k~yk~~~I--P~~lt~V~rYl~~~ya~d~F~~tcp~d~ei~~~y~~~~~ 218 (221)
T KOG1422|consen 168 KVAAKHYKNFEI--PASLTGVWRYLKNAYARDEFTNTCPADQEIILAYAPVAK 218 (221)
T ss_pred HHHHHHhcCCCC--chhhhHHHHHHHHHHhHHHhhcCCchHHHHHHhhhhhhh
Confidence 765443 44454 679999999999999999999999999999888876443
No 23
>PLN02907 glutamate-tRNA ligase
Probab=99.90 E-value=1.1e-22 Score=180.37 Aligned_cols=158 Identities=19% Similarity=0.231 Sum_probs=130.1
Q ss_pred CcceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEe-CCccccchHHHHHHHHhhC
Q 027575 1 MAEVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH-GEKPVCDSMVILEYIEEMW 79 (221)
Q Consensus 1 M~~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~-~~~~i~es~~I~~yL~~~~ 79 (221)
|+ ++||+.+.| .+.++.++|++.|++|+.+. .+|+ |+||+|++ ||.+|+||.+|++||++.+
T Consensus 1 ~~-~kLy~~~~S-~~~~v~~~L~~lgv~~e~~~--------------~~p~-GkVPvLv~ddG~~L~ES~AIl~YLa~~~ 63 (722)
T PLN02907 1 ME-AKLSFPPDS-PPLAVIAAAKVAGVPLTIDP--------------SLKS-GSAPTLLFSSGEKLTGTNVLLRYIARSA 63 (722)
T ss_pred Ce-EEEEECCCC-ChHHHHHHHHHcCCCcEEee--------------cCCC-CCCcEEEECCCCEEECHHHHHHHHHHhC
Confidence 77 999999877 57789999999999998864 2577 89999995 8899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHH
Q 027575 80 PQSPLMPNDPYDRALARFWIKFGEDKGVAVWKMFHSNQDEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSM 159 (221)
Q Consensus 80 ~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~ 159 (221)
++..|+|.++.+++++++|+.++..... ...+.+.++.| |.+|++++||+|+++|+||+++++.
T Consensus 64 p~~~L~p~d~~erAqV~qWL~~~~~~~~---------------~~~l~~~L~~L-E~~L~~rtYLvGd~lTLADIaL~~~ 127 (722)
T PLN02907 64 SLPGFYGQDAFESSQVDEWLDYAPTFSS---------------GSEFENACEYV-DGYLASRTFLVGYSLTIADIAIWSG 127 (722)
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHhhccc---------------HHHHHHHHHHH-HHHhccCCeecCCCCCHHHHHHHHH
Confidence 8888999999999999999988754211 02356678999 9999999999999999999999988
Q ss_pred HHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcc
Q 027575 160 LYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPV 195 (221)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~ 195 (221)
+..... ....... ...+|+|.+|++++.++|+
T Consensus 128 L~~~~~--~~~~~~~--~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 128 LAGSGQ--RWESLRK--SKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred HHhhhh--hhhcccc--cccCHHHHHHHHHHHhCCC
Confidence 765411 1101111 4689999999999999999
No 24
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.84 E-value=7.6e-21 Score=123.38 Aligned_cols=74 Identities=43% Similarity=0.661 Sum_probs=70.4
Q ss_pred EeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhhCCCC
Q 027575 6 LLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEMWPQS 82 (221)
Q Consensus 6 Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~~~~~ 82 (221)
||+++.||||+|+|++|.++||+|+.+.++.. .+.+++.+.||. |+||+|++||.+++||.+|++||+++++++
T Consensus 1 Ly~~~~Sp~~~kv~~~l~~~~i~~~~~~v~~~--~~~~~~~~~~p~-~~vPvL~~~g~~l~dS~~I~~yL~~~~~~~ 74 (75)
T PF13417_consen 1 LYGFPGSPYSQKVRLALEEKGIPYELVPVDPE--EKRPEFLKLNPK-GKVPVLVDDGEVLTDSAAIIEYLEERYPGP 74 (75)
T ss_dssp EEEETTSHHHHHHHHHHHHHTEEEEEEEEBTT--STSHHHHHHSTT-SBSSEEEETTEEEESHHHHHHHHHHHSTSS
T ss_pred CCCcCCChHHHHHHHHHHHcCCeEEEeccCcc--cchhHHHhhccc-ccceEEEECCEEEeCHHHHHHHHHHHcCCC
Confidence 89999999999999999999999999999987 678999999998 899999999999999999999999999865
No 25
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.82 E-value=3.6e-20 Score=119.34 Aligned_cols=72 Identities=25% Similarity=0.445 Sum_probs=67.1
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccC-ccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHH
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIE 76 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~ 76 (221)
++||+++.||+|++++++|.++|++|+.+.++... +.+.++|.++||. |+||+|++||.+++||.+|++||+
T Consensus 1 ~~ly~~~~s~~s~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~inP~-g~vP~L~~~g~~l~Es~aI~~yLe 73 (73)
T cd03052 1 LVLYHWTQSFSSQKVRLVIAEKGLRCEEYDVSLPLSEHNEPWFMRLNPT-GEVPVLIHGDNIICDPTQIIDYLE 73 (73)
T ss_pred CEEecCCCCccHHHHHHHHHHcCCCCEEEEecCCcCccCCHHHHHhCcC-CCCCEEEECCEEEEcHHHHHHHhC
Confidence 47999999999999999999999999999998865 5678899999998 899999999999999999999985
No 26
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.81 E-value=1.3e-19 Score=116.86 Aligned_cols=73 Identities=27% Similarity=0.417 Sum_probs=68.7
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhhC
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEMW 79 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~~ 79 (221)
|+||+.+.||+|++++++|+++|++|+.+.++.. +..+++++.||. |++|+|++||..++||.+|++||++++
T Consensus 1 ~~ly~~~~~~~~~~v~~~l~~~gi~~~~~~v~~~--~~~~~~~~~~p~-~~vP~l~~~~~~l~es~aI~~yL~~~~ 73 (73)
T cd03059 1 MTLYSGPDDVYSHRVRIVLAEKGVSVEIIDVDPD--NPPEDLAELNPY-GTVPTLVDRDLVLYESRIIMEYLDERF 73 (73)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCccEEEEcCCC--CCCHHHHhhCCC-CCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 6899999999999999999999999999999876 778899999998 899999999999999999999999864
No 27
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.81 E-value=1.4e-19 Score=120.16 Aligned_cols=70 Identities=29% Similarity=0.335 Sum_probs=66.1
Q ss_pred CCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhhCCCC
Q 027575 10 LPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEMWPQS 82 (221)
Q Consensus 10 ~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~~~~~ 82 (221)
..||||+|+|++|+++||+|+.+.+++. +++++|+++||+ |+||+|+++|.+|+||.+|++||+++++.+
T Consensus 20 g~cpf~~rvrl~L~eKgi~ye~~~vd~~--~~p~~~~~~nP~-g~vPvL~~~~~~i~eS~~I~eYLde~~~~~ 89 (91)
T cd03061 20 GNCPFCQRLFMVLWLKGVVFNVTTVDMK--RKPEDLKDLAPG-TQPPFLLYNGEVKTDNNKIEEFLEETLCPP 89 (91)
T ss_pred CCChhHHHHHHHHHHCCCceEEEEeCCC--CCCHHHHHhCCC-CCCCEEEECCEEecCHHHHHHHHHHHccCC
Confidence 5799999999999999999999999998 888999999998 999999999999999999999999998644
No 28
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=99.80 E-value=2e-19 Score=116.40 Aligned_cols=73 Identities=26% Similarity=0.353 Sum_probs=67.6
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccC-ccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHh
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEE 77 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~ 77 (221)
|+||+++.||+|++++++|+++|++|+.+.++... +...+++.+.||+ |++|+|+++|..++||.+|++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~i~~~~~~~~~~~~~~~~p~-~~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 1 IDLYYLPGSPPCRAVLLTAKALGLELNLKEVNLMKGEHLKPEFLKLNPQ-HTVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred CEEEeCCCCCcHHHHHHHHHHcCCCCEEEEecCccCCcCCHHHHhhCcC-CCCCEEEECCEEEEcHHHHHHHHhC
Confidence 68999999999999999999999999999998764 5567999999998 8999999999999999999999964
No 29
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=99.80 E-value=2.6e-19 Score=115.82 Aligned_cols=74 Identities=66% Similarity=1.119 Sum_probs=68.1
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhhC
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEMW 79 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~~ 79 (221)
|+||+++.||+|+++|++|+++|++|+.+.++.. .+.+++++.||..|++|+|++||.+++||.+|++||++++
T Consensus 1 ~~Ly~~~~sp~~~~v~~~l~~~gl~~~~~~~~~~--~~~~~~~~~~p~~~~vP~l~~~~~~l~eS~aI~~yL~~~~ 74 (74)
T cd03058 1 VKLLGAWASPFVLRVRIALALKGVPYEYVEEDLG--NKSELLLASNPVHKKIPVLLHNGKPICESLIIVEYIDEAW 74 (74)
T ss_pred CEEEECCCCchHHHHHHHHHHcCCCCEEEEeCcc--cCCHHHHHhCCCCCCCCEEEECCEEeehHHHHHHHHHhhC
Confidence 6899999999999999999999999999998876 7788999999932799999999999999999999999864
No 30
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.79 E-value=6.7e-19 Score=114.51 Aligned_cols=75 Identities=31% Similarity=0.437 Sum_probs=68.7
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccC-ccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhhC
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEMW 79 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~~ 79 (221)
++||+++.|++|++++++|+++|++|+.+.++... +...+++.+.||+ |++|+|+++|.+++||.+|++||++++
T Consensus 1 ~~ly~~~~s~~~~~v~~~l~~~g~~~~~~~v~~~~~~~~~~~~~~~~p~-~~vP~L~~~~~~l~eS~aI~~Yl~~~~ 76 (76)
T cd03050 1 LKLYYDLMSQPSRAVYIFLKLNKIPFEECPIDLRKGEQLTPEFKKINPF-GKVPAIVDGDFTLAESVAILRYLARKF 76 (76)
T ss_pred CEEeeCCCChhHHHHHHHHHHcCCCcEEEEecCCCCCcCCHHHHHhCcC-CCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 58999999999999999999999999999998764 4556799999998 899999999999999999999999864
No 31
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=99.78 E-value=8.7e-19 Score=113.95 Aligned_cols=74 Identities=36% Similarity=0.516 Sum_probs=68.1
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccC-ccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhh
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEM 78 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~ 78 (221)
++||+.+.||+|+++|++|.++|++|+.+.++... +...+++.+.||+ |++|+|+++|..++||.+|++||+++
T Consensus 2 ~~Ly~~~~s~~s~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~P~-~~vP~l~~~g~~l~es~aI~~yL~~~ 76 (76)
T cd03053 2 LKLYGAAMSTCVRRVLLCLEEKGVDYELVPVDLTKGEHKSPEHLARNPF-GQIPALEDGDLKLFESRAITRYLAEK 76 (76)
T ss_pred eEEEeCCCChhHHHHHHHHHHcCCCcEEEEeCccccccCCHHHHhhCCC-CCCCEEEECCEEEEcHHHHHHHHhhC
Confidence 79999999999999999999999999999988754 4567899999998 89999999999999999999999863
No 32
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.78 E-value=9.9e-19 Score=113.95 Aligned_cols=74 Identities=19% Similarity=0.151 Sum_probs=65.8
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEe--CCccccchHHHHHHHHhhC
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH--GEKPVCDSMVILEYIEEMW 79 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~--~~~~i~es~~I~~yL~~~~ 79 (221)
++||+++.||+|++++++|.++||+|+.+.++.. +...+++++.||. |+||+|++ +|..++||.+|++||++++
T Consensus 2 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~v~~~-~~~~~~~~~~~p~-~~vP~l~~~~~~~~l~es~~I~~yL~~~~ 77 (77)
T cd03041 2 LELYEFEGSPFCRLVREVLTELELDVILYPCPKG-SPKRDKFLEKGGK-VQVPYLVDPNTGVQMFESADIVKYLFKTY 77 (77)
T ss_pred ceEecCCCCchHHHHHHHHHHcCCcEEEEECCCC-hHHHHHHHHhCCC-CcccEEEeCCCCeEEEcHHHHHHHHHHhC
Confidence 7899999999999999999999999999988643 2346789999998 89999997 4689999999999999874
No 33
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.77 E-value=1.2e-18 Score=112.32 Aligned_cols=72 Identities=33% Similarity=0.554 Sum_probs=66.7
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccC-ccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHH
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIE 76 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~ 76 (221)
++||+++.||+|++++++|.++|++|+.+.++... +.+.+++.+.||. |++|+|+++|..++||.+|++||.
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~-~~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 1 MKLYGFPLSGNCYKVRLLLALLGIPYEWVEVDILKGETRTPEFLALNPN-GEVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEecCCCcccCCHHHHHhCCC-CCCCEEEECCEEEEcHHHHHHHhC
Confidence 58999999999999999999999999999998754 5678999999998 899999999999999999999984
No 34
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=99.77 E-value=1.6e-18 Score=111.18 Aligned_cols=69 Identities=29% Similarity=0.420 Sum_probs=64.3
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeC-CccccchHHHHHHH
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHG-EKPVCDSMVILEYI 75 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~-~~~i~es~~I~~yL 75 (221)
.+||+++.||||+|++++|+++|++|+.+.++.. .+.+++++.||. |+||+|+++ |..++||.+|++|+
T Consensus 1 ~~ly~~~~~p~~~rv~~~L~~~gl~~e~~~v~~~--~~~~~~~~~np~-~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 1 PILYSFRRCPYAMRARMALLLAGITVELREVELK--NKPAEMLAASPK-GTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred CEEEecCCCcHHHHHHHHHHHcCCCcEEEEeCCC--CCCHHHHHHCCC-CCCCEEEECCCcEEecHHHHHHhh
Confidence 3799999999999999999999999999999987 667899999998 899999985 89999999999997
No 35
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=99.77 E-value=8.1e-19 Score=113.18 Aligned_cols=72 Identities=15% Similarity=0.052 Sum_probs=66.5
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHh
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEE 77 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~ 77 (221)
+++||+++.|++|+++|++|.++|++|+.+.++.. ...+++.+.||+ |++|+|++||.+++||.+|++||++
T Consensus 1 ~~~Ly~~~~~~~~~~v~~~L~~~~i~~e~~~v~~~--~~~~~~~~~~p~-~~vP~l~~~~~~l~es~aI~~yL~~ 72 (73)
T cd03076 1 PYTLTYFPVRGRAEAIRLLLADQGISWEEERVTYE--EWQESLKPKMLF-GQLPCFKDGDLTLVQSNAILRHLGR 72 (73)
T ss_pred CcEEEEeCCcchHHHHHHHHHHcCCCCEEEEecHH--HhhhhhhccCCC-CCCCEEEECCEEEEcHHHHHHHHhc
Confidence 47999999999999999999999999999999874 556689999998 8999999999999999999999975
No 36
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=99.76 E-value=3e-18 Score=112.83 Aligned_cols=75 Identities=29% Similarity=0.441 Sum_probs=68.4
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccC-ccCchHHHhhCCCCCcccEEEeC---CccccchHHHHHHHHhhC
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLVHG---EKPVCDSMVILEYIEEMW 79 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~~~---~~~i~es~~I~~yL~~~~ 79 (221)
++||+++. |+|++++++|.++|++|+.+.++... +..+++|++.||. |+||+|+++ |..|+||.+|++||++++
T Consensus 2 ~~Ly~~~~-~~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~p~-~~vP~l~~~~~~g~~l~eS~aI~~yL~~~~ 79 (81)
T cd03048 2 ITLYTHGT-PNGFKVSIMLEELGLPYEIHPVDISKGEQKKPEFLKINPN-GRIPAIVDHNGTPLTVFESGAILLYLAEKY 79 (81)
T ss_pred eEEEeCCC-CChHHHHHHHHHcCCCcEEEEecCcCCcccCHHHHHhCcC-CCCCEEEeCCCCceEEEcHHHHHHHHHHHh
Confidence 68999986 99999999999999999999998754 4677899999998 899999986 789999999999999987
Q ss_pred C
Q 027575 80 P 80 (221)
Q Consensus 80 ~ 80 (221)
+
T Consensus 80 ~ 80 (81)
T cd03048 80 D 80 (81)
T ss_pred C
Confidence 5
No 37
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=99.76 E-value=2.3e-18 Score=111.05 Aligned_cols=72 Identities=28% Similarity=0.481 Sum_probs=65.9
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccC-ccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHH
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIE 76 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~ 76 (221)
++||+++.||++++++++|+++|++|+.+.++... +...+++++.||+ |++|+|++||..|+||.+|++||.
T Consensus 1 ~~l~~~~~s~~~~~v~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~nP~-~~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 1 LTIWGRRSSINVQKVLWLLDELGLPYERIDAGGQFGGLDTPEFLAMNPN-GRVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred CEEEecCCCcchHHHHHHHHHcCCCCEEEEeccccccccCHHHHhhCCC-CCCCEEEECCEEEECHHHHHHHhC
Confidence 58999999999999999999999999999987643 4567899999999 899999999999999999999984
No 38
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=99.76 E-value=3.7e-18 Score=110.68 Aligned_cols=72 Identities=22% Similarity=0.270 Sum_probs=66.4
Q ss_pred EEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEe-CCccccchHHHHHHHHh
Q 027575 5 KLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH-GEKPVCDSMVILEYIEE 77 (221)
Q Consensus 5 ~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~-~~~~i~es~~I~~yL~~ 77 (221)
+||+++.||++++++++|+++|++|+.+.++...+.+.++|++.||+ |++|+|++ ||.+|+||.+|++||++
T Consensus 2 ~Ly~~~~~~~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~nP~-~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 2 TLYTYPGNPRSLKILAAAKYNGLDVEIVDFQPGKENKTPEFLKKFPL-GKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred eEecCCCCccHHHHHHHHHHcCCceEEEecccccccCCHHHHHhCCC-CCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 79999999999999999999999999999987544568899999998 89999997 58899999999999976
No 39
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=99.75 E-value=3e-18 Score=110.70 Aligned_cols=72 Identities=29% Similarity=0.419 Sum_probs=65.5
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccC-ccCchHHHhhCCCCCcccEEEe-CCccccchHHHHHHHH
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLVH-GEKPVCDSMVILEYIE 76 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~~-~~~~i~es~~I~~yL~ 76 (221)
|+||+++.||+|+++|++|.++|++|+.+.++... +...+++.+.||. |++|+|++ ||..++||.+|++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~L~~~~l~~~~~~v~~~~~~~~~~~~~~~~p~-~~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 1 MKLYDSPTAPNPRRVRIFLAEKGIDVPLVTVDLAAGEQRSPEFLAKNPA-GTVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred CEEEeCCCCcchHHHHHHHHHcCCCceEEEeecccCccCCHHHHhhCCC-CCCCEEEeCCCCEEecHHHHHHHhC
Confidence 58999999999999999999999999999998753 4567889999998 89999995 7789999999999985
No 40
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=99.75 E-value=5.7e-18 Score=110.36 Aligned_cols=75 Identities=31% Similarity=0.462 Sum_probs=67.6
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccC-ccCchHHHhhCCCCCcccEEEeC-CccccchHHHHHHHHhhCC
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLVHG-EKPVCDSMVILEYIEEMWP 80 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~~~-~~~i~es~~I~~yL~~~~~ 80 (221)
|+||+++.| .+++++++|.++|++|+.+.++... +.+.+++++.||. |++|+|+++ |..++||.+|++||++++|
T Consensus 1 ~~Ly~~~~~-~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~np~-~~vP~l~~~~g~~l~eS~aI~~yL~~~~p 77 (77)
T cd03057 1 MKLYYSPGA-CSLAPHIALEELGLPFELVRVDLRTKTQKGADYLAINPK-GQVPALVLDDGEVLTESAAILQYLADLHP 77 (77)
T ss_pred CEEEeCCCC-chHHHHHHHHHcCCCceEEEEecccCccCCHhHHHhCCC-CCCCEEEECCCcEEEcHHHHHHHHHHhCc
Confidence 589999876 6999999999999999999998864 5668999999998 899999986 8999999999999999875
No 41
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=99.75 E-value=4.6e-18 Score=109.56 Aligned_cols=72 Identities=31% Similarity=0.488 Sum_probs=66.7
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccC-ccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHH
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIE 76 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~ 76 (221)
|+||++..|++|+++|++|+++|++|+.+.++... +.+.+++.+.||. |++|+|+++|..++||.+|++||+
T Consensus 1 ~~L~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~p~-~~vP~l~~~~~~l~es~aI~~yL~ 73 (73)
T cd03042 1 MILYSYFRSSASYRVRIALNLKGLDYEYVPVNLLKGEQLSPAYRALNPQ-GLVPTLVIDGLVLTQSLAIIEYLD 73 (73)
T ss_pred CEEecCCCCcchHHHHHHHHHcCCCCeEEEecCccCCcCChHHHHhCCC-CCCCEEEECCEEEEcHHHHHHHhC
Confidence 58999999999999999999999999999998754 4667899999998 899999999999999999999985
No 42
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=99.75 E-value=4.5e-18 Score=109.10 Aligned_cols=70 Identities=23% Similarity=0.321 Sum_probs=61.4
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeC-CccccchHHHHHHHHh
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHG-EKPVCDSMVILEYIEE 77 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~-~~~i~es~~I~~yL~~ 77 (221)
|+||+++.||||+|+|++|.++|++|+.+.++.. . .....+.+|. |++|+|+++ |..++||.+|++||++
T Consensus 1 ~~Ly~~~~~p~~~rvr~~L~~~gl~~~~~~~~~~--~-~~~~~~~~~~-~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 1 MKLYIYEHCPFCVKARMIAGLKNIPVEQIILQND--D-EATPIRMIGA-KQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred CceEecCCCcHhHHHHHHHHHcCCCeEEEECCCC--c-hHHHHHhcCC-CccCEEEeCCCeEeehHHHHHHHHhC
Confidence 6799999999999999999999999999988754 2 2345678998 899999985 8999999999999974
No 43
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=99.74 E-value=7.8e-18 Score=109.40 Aligned_cols=75 Identities=29% Similarity=0.532 Sum_probs=67.9
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccC-ccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhhCC
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEMWP 80 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~~~ 80 (221)
|+||+++. +++++++++|+++|++|+.+.++... +.+.+++.+.||+ |++|+|+++|..++||.+|++||++++|
T Consensus 1 ~~l~~~~~-~~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~-~~vP~l~~~g~~l~es~aI~~yL~~~~~ 76 (76)
T cd03046 1 ITLYHLPR-SRSFRILWLLEELGLPYELVLYDRGPGEQAPPEYLAINPL-GKVPVLVDGDLVLTESAAIILYLAEKYG 76 (76)
T ss_pred CEEEeCCC-CChHHHHHHHHHcCCCcEEEEeCCCCCccCCHHHHhcCCC-CCCCEEEECCEEEEcHHHHHHHHHHhCc
Confidence 58999886 58999999999999999999998754 4678999999998 8999999999999999999999999864
No 44
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.74 E-value=7.2e-18 Score=108.74 Aligned_cols=70 Identities=37% Similarity=0.486 Sum_probs=64.8
Q ss_pred eEEeccCCChhHHHHHHHHHh--hCCCceEEEccccCccCchHHHhhCCCCCcccEEEe-CCccccchHHHHHHHH
Q 027575 4 VKLLGTLPSPFVYRVIWALKL--KGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH-GEKPVCDSMVILEYIE 76 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~--~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~-~~~~i~es~~I~~yL~ 76 (221)
++||+++.||+|+++|++|.+ +|++|+.+.++.. .+.+++++.||+ |++|+|++ ||..++||.+|++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~l~~~~~~i~~~~~~~~~~--~~~~~~~~~~p~-~~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 1 MKLLYSPTSPYVRKVRVAAHETGLGDDVELVLVNPW--SDDESLLAVNPL-GKIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred CEEecCCCCcHHHHHHHHHHHhCCCCCcEEEEcCcc--cCChHHHHhCCC-CCCCEEEECCCCEEECHHHHHhhhC
Confidence 589999999999999999999 8999999999876 677899999998 89999985 7899999999999985
No 45
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=99.74 E-value=1e-17 Score=112.17 Aligned_cols=71 Identities=28% Similarity=0.485 Sum_probs=65.9
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeC-CccccchHHHHHHHH
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHG-EKPVCDSMVILEYIE 76 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~-~~~i~es~~I~~yL~ 76 (221)
.++||+++.||+|++++++|.++|++|+.+.++.. ...+++.+.||. |++|+|+++ |..++||.+|++||+
T Consensus 18 ~~~Ly~~~~sp~~~kv~~~L~~~gl~~~~~~v~~~--~~~~~~~~~np~-~~vPvL~~~~g~~l~eS~aI~~yLe 89 (89)
T cd03055 18 IIRLYSMRFCPYAQRARLVLAAKNIPHEVININLK--DKPDWFLEKNPQ-GKVPALEIDEGKVVYESLIICEYLD 89 (89)
T ss_pred cEEEEeCCCCchHHHHHHHHHHcCCCCeEEEeCCC--CCcHHHHhhCCC-CCcCEEEECCCCEEECHHHHHHhhC
Confidence 48999999999999999999999999999999876 566789999998 899999986 899999999999985
No 46
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=99.73 E-value=5.7e-18 Score=108.93 Aligned_cols=72 Identities=24% Similarity=0.099 Sum_probs=64.0
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHh
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEE 77 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~ 77 (221)
++||+++.|++|+++|++|+++|++|+.+.++... ...+++.+.||+ |++|+|+++|..++||.+|++||.+
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~~~~~~-~~~~~~~~~~p~-~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 1 YKLTYFNIRGRGEPIRLLLADAGVEYEDVRITYEE-WPELDLKPTLPF-GQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred CEEEEEcCcchHHHHHHHHHHCCCCcEEEEeCHHH-hhhhhhccCCcC-CCCCEEEECCEEEEecHHHHHHhhC
Confidence 58999999999999999999999999999988752 223458899998 8999999999999999999999963
No 47
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.71 E-value=1.7e-16 Score=113.05 Aligned_cols=121 Identities=43% Similarity=0.724 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHhhhh-hhhHHhhcCCc-hHHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHHHHHHHH
Q 027575 90 YDRALARFWIKFGEDK-GVAVWKMFHSN-QDEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLYWLQILE 167 (221)
Q Consensus 90 ~~~a~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~ 167 (221)
.+++++++|+.+.+.. .+.+...+... +..+.....+.+.++.| |+.|++++|++|+++|+|||++++.+.++....
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~~ 80 (126)
T cd03185 2 YERAVARFWAAFIDDKLFPAGRKVLAAKGEEREKAKEEALEALKVL-EEELGGKPFFGGDTIGYVDIALGSFLGWFRAYE 80 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH-HHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHH
Confidence 4799999999999877 56655444433 45556788899999999 999998999999999999999999999885443
Q ss_pred HHhcccccCCCCCchHHHHHHHHhcCcchhccCCChhhHHHHHH
Q 027575 168 DIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDRDGISLFFK 211 (221)
Q Consensus 168 ~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 211 (221)
...+.+......+|++.+|++++.++|++++++...+...+.++
T Consensus 81 ~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~~~~~~~ 124 (126)
T cd03185 81 EVGGVKLLDEEKTPLLAAWAERFLELEAVKEVLPDRDKLVEFAK 124 (126)
T ss_pred HHcCccccCcccCchHHHHHHHHHhccHHHHhCCCHHHHHHHHH
Confidence 33233322246799999999999999999999999877666544
No 48
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=99.71 E-value=2.9e-16 Score=121.42 Aligned_cols=179 Identities=15% Similarity=0.299 Sum_probs=118.4
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHh-----
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEE----- 77 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~----- 77 (221)
.++||.+.+||||-+||..|.+.||+|+.++|++. . +.+++ -+- +.+||+|...|..+.||.+|+.-|..
T Consensus 90 ~l~LyQyetCPFCcKVrAFLDyhgisY~VVEVnpV--~-r~eIk-~Ss-ykKVPil~~~Geqm~dSsvIIs~laTyLq~~ 164 (370)
T KOG3029|consen 90 DLVLYQYETCPFCCKVRAFLDYHGISYAVVEVNPV--L-RQEIK-WSS-YKKVPILLIRGEQMVDSSVIISLLATYLQDK 164 (370)
T ss_pred eEEEEeeccCchHHHHHHHHhhcCCceEEEEecch--h-hhhcc-ccc-cccccEEEeccceechhHHHHHHHHHHhccC
Confidence 47899999999999999999999999999999985 2 23322 233 37999999977789999999887733
Q ss_pred ---------hCCCCCCC------------------CC-C----HHHHHHHHHHHHHhhhh-----hhhHHhhcCC-----
Q 027575 78 ---------MWPQSPLM------------------PN-D----PYDRALARFWIKFGEDK-----GVAVWKMFHS----- 115 (221)
Q Consensus 78 ---------~~~~~~l~------------------p~-~----~~~~a~~~~~~~~~~~~-----~~~~~~~~~~----- 115 (221)
.||.-+.+ .+ + -+.+..-+.|-.|+++. .|.+.+..++
T Consensus 165 ~q~l~eiiq~yPa~~~~ne~GK~v~~~~NKyflM~~e~d~~~~ke~~~eerkWR~WvDn~lVHLiSPNvYrn~~EsletF 244 (370)
T KOG3029|consen 165 RQDLGEIIQMYPATSFFNEDGKEVNDILNKYFLMYREHDPGVSKETDEEERKWRSWVDNHLVHLISPNVYRNMGESLETF 244 (370)
T ss_pred CCCHHHHHHhccccccccccccchhhcchhheeeeeccCCCccccchHHHhHHHHHHhhhhhhhcCcccccChhhHHHHH
Confidence 23311111 01 1 11223445566666544 1222110000
Q ss_pred --------------------------------------chHHHHHHHHHHHHHHHHHhccc-CCCCeeecCCCchhHHHH
Q 027575 116 --------------------------------------NQDEESRMKEILEMLQTIEEHGI-GEKKIFHGDKIGSLEIAF 156 (221)
Q Consensus 116 --------------------------------------~~~~~~~~~~~~~~l~~l~e~~L-~~~~~l~G~~~t~aD~~l 156 (221)
.-+....++.+.++++.+ -..| .+++|+.|++|++||+.+
T Consensus 245 ewf~q~G~w~~~FpawEr~lavY~GAtAM~lisK~LKkkhni~D~Re~lydA~d~W-vaalgknr~flGG~kPnLaDLsv 323 (370)
T KOG3029|consen 245 EWFSQAGEWDVHFPAWERDLAVYCGATAMYLISKMLKKKHNISDEREHLYDAADQW-VAALGKNRPFLGGKKPNLADLSV 323 (370)
T ss_pred HHHHHcCCccccCchHHHHHHHHhhHHHHHHHHHHHHhhcccchHHHHHHHHHHHH-HHHhCCCCCccCCCCCchhhhhh
Confidence 000122355566666666 5556 578999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhc
Q 027575 157 GSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKK 192 (221)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 192 (221)
++.+..+..+... .+ .-+..++..|+-+|.+
T Consensus 324 fGvl~sm~gc~af--kd---~~q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 324 FGVLRSMEGCQAF--KD---CLQNTSIGEWYYRMEA 354 (370)
T ss_pred hhhhhHhhhhhHH--HH---HHhcchHHHHHHHHHH
Confidence 9999988554332 11 2267899999999976
No 49
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=99.71 E-value=3.5e-17 Score=104.58 Aligned_cols=67 Identities=40% Similarity=0.614 Sum_probs=57.7
Q ss_pred CChhHHHHHHHHHhhCCCceEEEccccC--ccCchHHHhhCCCCCcccEEEe-CCccccchHHHHHHHHhh
Q 027575 11 PSPFVYRVIWALKLKGVPFEFVEEDVFS--NEKSALLLKYNPVHKKIPVLVH-GEKPVCDSMVILEYIEEM 78 (221)
Q Consensus 11 ~sp~~~~~~~~l~~~gi~~~~~~v~~~~--~~~~~~~~~~~p~~g~vP~L~~-~~~~i~es~~I~~yL~~~ 78 (221)
+|||++|++++|+++|++|+...+.... ...+++|.+.||. |+||+|++ +|.+++||.+|++||+++
T Consensus 1 ~sP~a~Rv~i~l~~~gl~~~~~~v~~~~~~~~~~~~~~~~~p~-~~VP~L~~~~g~vi~eS~~I~~yL~~~ 70 (70)
T PF13409_consen 1 FSPFAHRVRIALEEKGLPYEIKVVPLIPKGEQKPPEFLALNPR-GKVPVLVDPDGTVINESLAILEYLEEQ 70 (70)
T ss_dssp T-HHHHHHHHHHHHHTGTCEEEEEETTTTBCTTCHBHHHHSTT--SSSEEEETTTEEEESHHHHHHHHHHT
T ss_pred CchHhHHHHHHHHHhCCCCEEEEEeeecCccccChhhhccCcC-eEEEEEEECCCCEeeCHHHHHHHHhcC
Confidence 5999999999999999999998884422 3566899999998 89999997 789999999999999874
No 50
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=99.70 E-value=5.6e-17 Score=105.65 Aligned_cols=72 Identities=26% Similarity=0.455 Sum_probs=62.5
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeC----CccccchHHHHHHHHhh
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHG----EKPVCDSMVILEYIEEM 78 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~----~~~i~es~~I~~yL~~~ 78 (221)
+++||+++.||||++++++|.++|++|+.+.+++. . .++ .+.||. |+||+|+++ |.+|+||.+|++||+++
T Consensus 1 ~i~Ly~~~~~p~c~kv~~~L~~~gi~y~~~~~~~~--~-~~~-~~~~~~-~~vP~l~~~~~~~~~~l~eS~~I~~yL~~~ 75 (77)
T cd03040 1 KITLYQYKTCPFCCKVRAFLDYHGIPYEVVEVNPV--S-RKE-IKWSSY-KKVPILRVESGGDGQQLVDSSVIISTLKTY 75 (77)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCceEEEECCch--h-HHH-HHHhCC-CccCEEEECCCCCccEEEcHHHHHHHHHHH
Confidence 48999999999999999999999999999998764 2 233 356998 899999965 78999999999999986
Q ss_pred C
Q 027575 79 W 79 (221)
Q Consensus 79 ~ 79 (221)
.
T Consensus 76 ~ 76 (77)
T cd03040 76 L 76 (77)
T ss_pred c
Confidence 4
No 51
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=99.69 E-value=7e-17 Score=107.00 Aligned_cols=69 Identities=30% Similarity=0.444 Sum_probs=60.1
Q ss_pred CCChhHHHHHHHHHhhCCCceEEEccccC-ccCchHHHhhCCCCCcccEEEeC-CccccchHHHHHHHHhhCC
Q 027575 10 LPSPFVYRVIWALKLKGVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLVHG-EKPVCDSMVILEYIEEMWP 80 (221)
Q Consensus 10 ~~sp~~~~~~~~l~~~gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~~~-~~~i~es~~I~~yL~~~~~ 80 (221)
+.||+|+++|++|.++|++|+.+.++... +...+++ +.||. |++|+|++| |..++||.+|++||++++|
T Consensus 14 ~~Sp~~~kv~~~L~~~~i~~~~~~~~~~~~~~~~~~~-~~~p~-~~vP~L~~~~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 14 AFSPNVWKTRLALNHKGLEYKTVPVEFPDIPPILGEL-TSGGF-YTVPVIVDGSGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred CcCChhHHHHHHHHhCCCCCeEEEecCCCcccccccc-cCCCC-ceeCeEEECCCCEEeCHHHHHHHHHHhCc
Confidence 68999999999999999999999988753 2333455 78998 899999998 8999999999999999875
No 52
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=99.69 E-value=1e-16 Score=104.03 Aligned_cols=73 Identities=30% Similarity=0.316 Sum_probs=60.7
Q ss_pred EEeccCCChhHHHHHHHHHhhCCCceEEEccccC-ccCchHHHhhCCCCCcccEEEeC-CccccchHHHHHHHHh
Q 027575 5 KLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLVHG-EKPVCDSMVILEYIEE 77 (221)
Q Consensus 5 ~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~~~-~~~i~es~~I~~yL~~ 77 (221)
+|++++..++++++|++|+++|++|+.+.++... +++.++|.+.||..|++|+|+++ |.+++||.||++||++
T Consensus 2 ~l~l~~~~~~~~~~r~~l~~~gv~~e~~~v~~~~~~~~~~e~~~~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 2 TLTLYNGRGRSERIRLLLAEKGVEYEDVRVDFEKGEHKSPEFLAINPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp EEEEESSSTTTHHHHHHHHHTT--EEEEEEETTTTGGGSHHHHHHTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHhcccCceEEEecccccccchhhhhcccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 3444444559999999999999999999999865 56679999999952699999998 9999999999999975
No 53
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=99.68 E-value=1.4e-16 Score=104.85 Aligned_cols=74 Identities=16% Similarity=0.135 Sum_probs=62.9
Q ss_pred EEeccCCChhHHHHHHHHHhhCCCceEEEccccC-ccC-chHHHhh-----CCCCCcccEEEeCCccccchHHHHHHHHh
Q 027575 5 KLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFS-NEK-SALLLKY-----NPVHKKIPVLVHGEKPVCDSMVILEYIEE 77 (221)
Q Consensus 5 ~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~-~~~-~~~~~~~-----~p~~g~vP~L~~~~~~i~es~~I~~yL~~ 77 (221)
+|||+..++.|+++|++|+++|++|+.+.+++.. +.. .+++.+. +|+ |+||+|++||.+|+||.||++||.+
T Consensus 2 ~l~y~~~~~~~~~~~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~~~~P~-g~vP~L~~~g~~l~ES~AIl~YLa~ 80 (82)
T cd03075 2 TLGYWDIRGLAQPIRLLLEYTGEKYEEKRYELGDAPDYDRSQWLNEKFKLGLDF-PNLPYYIDGDVKLTQSNAILRYIAR 80 (82)
T ss_pred EEEEeCCccccHHHHHHHHHcCCCcEEEEeccCCccccchHhhhccchhcCCcC-CCCCEEEECCEEEeehHHHHHHHhh
Confidence 7999999999999999999999999999998763 222 3455432 298 8999999999999999999999987
Q ss_pred hC
Q 027575 78 MW 79 (221)
Q Consensus 78 ~~ 79 (221)
++
T Consensus 81 ~~ 82 (82)
T cd03075 81 KH 82 (82)
T ss_pred cC
Confidence 64
No 54
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=99.68 E-value=2.3e-16 Score=103.18 Aligned_cols=72 Identities=19% Similarity=0.166 Sum_probs=62.2
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhh-----CCCCCcccEEEeCCccccchHHHHHHHHh
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKY-----NPVHKKIPVLVHGEKPVCDSMVILEYIEE 77 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~-----~p~~g~vP~L~~~~~~i~es~~I~~yL~~ 77 (221)
+++||+++.|+.+++++++|++.|++|+.+.++.. +++.+. .|+ |+||+|++||.+|+||.||++||.+
T Consensus 1 ~~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~v~~~-----~~~~~~~~~~~~~~-g~vP~L~~~g~~l~ES~AI~~YL~~ 74 (79)
T cd03077 1 KPVLHYFNGRGRMESIRWLLAAAGVEFEEKFIESA-----EDLEKLKKDGSLMF-QQVPMVEIDGMKLVQTRAILNYIAG 74 (79)
T ss_pred CCEEEEeCCCChHHHHHHHHHHcCCCcEEEEeccH-----HHHHhhccccCCCC-CCCCEEEECCEEEeeHHHHHHHHHH
Confidence 36899999999999999999999999999988753 233333 357 8999999999999999999999999
Q ss_pred hCC
Q 027575 78 MWP 80 (221)
Q Consensus 78 ~~~ 80 (221)
+++
T Consensus 75 ~~~ 77 (79)
T cd03077 75 KYN 77 (79)
T ss_pred HcC
Confidence 875
No 55
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=99.67 E-value=8.5e-16 Score=118.25 Aligned_cols=169 Identities=19% Similarity=0.249 Sum_probs=123.8
Q ss_pred CCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhhCCCCCCCCCCH
Q 027575 10 LPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEMWPQSPLMPNDP 89 (221)
Q Consensus 10 ~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~~~~~~l~p~~~ 89 (221)
+.||||.++...|+..+||||.+..... ..++. |++|.++.||..|.||..|..+|.+.+.-+.. -++
T Consensus 59 nLSPfClKvEt~lR~~~IpYE~~~~~~~---------~rSr~-G~lPFIELNGe~iaDS~~I~~~L~~hf~~~~~--L~~ 126 (281)
T KOG4244|consen 59 NLSPFCLKVETFLRAYDIPYEIVDCSLK---------RRSRN-GTLPFIELNGEHIADSDLIEDRLRKHFKIPDD--LSA 126 (281)
T ss_pred CCChHHHHHHHHHHHhCCCceeccccce---------eeccC-CCcceEEeCCeeccccHHHHHHHHHHcCCCCC--CCH
Confidence 4689999999999999999999887652 24554 89999999999999999999999999864332 355
Q ss_pred HHHHHHHHHHHHhhhh-h-hhH---------------------------Hhhc-----CCc-----------hHHHHHHH
Q 027575 90 YDRALARFWIKFGEDK-G-VAV---------------------------WKMF-----HSN-----------QDEESRMK 124 (221)
Q Consensus 90 ~~~a~~~~~~~~~~~~-~-~~~---------------------------~~~~-----~~~-----------~~~~~~~~ 124 (221)
+++++.+.+..+++.. + ..+ .+++ +.. =..++..+
T Consensus 127 e~~a~s~Al~rm~dnhL~~~l~y~k~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~f~~kv~~r~~g~IG~f~~~Ei~e 206 (281)
T KOG4244|consen 127 EQRAQSRALSRMADNHLFWILLYYKGADDAWLNTDRKLIGLPGFLFPLLLPLFWKAIFGKKVYKRSTGAIGDFESAEIDE 206 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHHHhhccccCcCHHHHHH
Confidence 5677777666655533 1 000 0111 110 01133566
Q ss_pred HHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhc
Q 027575 125 EILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKK 192 (221)
Q Consensus 125 ~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 192 (221)
-+.+-|..+ ++.|++++||.|+++|-+|+.+++.|..+...-...-.+++ .+++|+|..|++|+++
T Consensus 207 ll~rDlr~i-~~~Lg~KkflfGdkit~~DatvFgqLa~v~YP~~~~i~d~l-e~d~p~l~eYceRIr~ 272 (281)
T KOG4244|consen 207 LLHRDLRAI-SDYLGDKKFLFGDKITPADATVFGQLAQVYYPFRSHISDLL-EGDFPNLLEYCERIRK 272 (281)
T ss_pred HHHHHHHHH-HHHhCCCccccCCCCCcceeeehhhhhheeccCCCcHHHHH-hhhchHHHHHHHHHHH
Confidence 678889999 99999999999999999999999988877541011011223 6889999999999987
No 56
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=99.66 E-value=3.8e-16 Score=101.16 Aligned_cols=67 Identities=27% Similarity=0.437 Sum_probs=60.5
Q ss_pred eEEeccC-------CChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHH
Q 027575 4 VKLLGTL-------PSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIE 76 (221)
Q Consensus 4 ~~Ly~~~-------~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~ 76 (221)
++||+++ .||+|++++++|+++|++|+.+.++.. +.||. |++|+|++||.+++||.+|++||+
T Consensus 2 ~~L~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~~~~~---------~~~p~-g~vPvl~~~g~~l~eS~~I~~yL~ 71 (75)
T cd03080 2 ITLYQFPRAFGVPSLSPFCLKVETFLRMAGIPYENKFGGLA---------KRSPK-GKLPFIELNGEKIADSELIIDHLE 71 (75)
T ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHCCCCcEEeecCcc---------cCCCC-CCCCEEEECCEEEcCHHHHHHHHH
Confidence 5899988 689999999999999999999887642 58998 899999999999999999999999
Q ss_pred hhCC
Q 027575 77 EMWP 80 (221)
Q Consensus 77 ~~~~ 80 (221)
++|+
T Consensus 72 ~~~~ 75 (75)
T cd03080 72 EKYG 75 (75)
T ss_pred HHcC
Confidence 9864
No 57
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.65 E-value=5.3e-16 Score=99.94 Aligned_cols=68 Identities=34% Similarity=0.554 Sum_probs=61.0
Q ss_pred ccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHH
Q 027575 8 GTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIE 76 (221)
Q Consensus 8 ~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~ 76 (221)
....||++++++++|+++|++|+.+.++.......+++.+.||+ |++|+|+++|.+++||.+|++||.
T Consensus 6 ~~~~s~~s~~v~~~L~~~gl~~e~~~v~~~~~~~~~~~~~~nP~-g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 6 NKNYSSWSLRPWLLLKAAGIPFEEILVPLYTPDTRARILEFSPT-GKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred CCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCccccHHHHhhCCC-CcCCEEEECCEEEEcHHHHHHHhC
Confidence 45689999999999999999999999987643356899999998 899999999999999999999984
No 58
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=5.9e-16 Score=119.60 Aligned_cols=204 Identities=20% Similarity=0.252 Sum_probs=147.0
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCC-c-eEEEccccC----c------------------cCchHHHhhCCCC---Cccc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVP-F-EFVEEDVFS----N------------------EKSALLLKYNPVH---KKIP 56 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~-~-~~~~v~~~~----~------------------~~~~~~~~~~p~~---g~vP 56 (221)
+.||.+-.|||++|..+.-+.+|++ . ....|++.- . ...+-|..-.|.| -+||
T Consensus 52 YhLYvslaCPWAHRTLI~R~LkgLE~~Isvsvv~~~m~~~GW~F~~~~~g~t~dpl~g~~~L~~~Y~~adP~YsgRvTVP 131 (324)
T COG0435 52 YHLYVSLACPWAHRTLIFRALKGLEPVISVSVVHPLMDENGWTFDPEFPGATGDPLYGIERLSQLYTRADPDYSGRVTVP 131 (324)
T ss_pred EEEEEEecCchHHHHHHHHHHhcccccceEEEecccccCCCceEcCCCCCCCCCcccchhHHHHHHhhcCCCCCCceeEE
Confidence 6799999999999999999999996 1 111121110 0 0112233345543 2799
Q ss_pred EEEeC--C-ccccchHHHHHHHHhhCC-----CCCCCCCCHHHHHHHHHHHHHhhhhh-hhH-HhhcCCc-hHHHHHHHH
Q 027575 57 VLVHG--E-KPVCDSMVILEYIEEMWP-----QSPLMPNDPYDRALARFWIKFGEDKG-VAV-WKMFHSN-QDEESRMKE 125 (221)
Q Consensus 57 ~L~~~--~-~~i~es~~I~~yL~~~~~-----~~~l~p~~~~~~a~~~~~~~~~~~~~-~~~-~~~~~~~-~~~~~~~~~ 125 (221)
||.+- . .+-.||..|++-+...|. ...|+|.+ .+.+++.+..++.+.. .-+ +.-|... ++.++....
T Consensus 132 VLwDk~~~tIVnNES~eIirm~N~aFde~~~~~~dlyP~~--Lr~eId~~n~~Iy~~vNNGVYk~GFA~tq~aYeea~~~ 209 (324)
T COG0435 132 VLWDKKTQTIVNNESAEIIRMFNSAFDEFGASAVDLYPEA--LRTEIDELNKWIYDTVNNGVYKAGFATTQEAYEEAVKK 209 (324)
T ss_pred EEEecCCCeeecCCcHHHHHHHHHHHHHHhhhccccCCHH--HHHHHHHHHhhhcccccCceeeecccchHHHHHHHHHH
Confidence 99973 2 344899999999987663 23588877 4888888888887762 222 2334444 778889999
Q ss_pred HHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHHHHHH-HHHHhcccccCCCCCchHHHHHHHHhcCcchhccCCChh
Q 027575 126 ILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLYWLQI-LEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDRD 204 (221)
Q Consensus 126 ~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~-~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 204 (221)
+-+.|+.| |..|+++.|++|+++|-||+-+++.|-++.. ...++.+..-....+|+|..|+..+.+.|.|+++.. .+
T Consensus 210 lF~~Ld~l-E~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq~pg~~~T~d-f~ 287 (324)
T COG0435 210 LFEALDKL-EQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQLPGFAETVD-FD 287 (324)
T ss_pred HHHHHHHH-HHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHHhcCcccccccc-hh
Confidence 99999999 9999999999999999999999998888732 222334444345679999999999999999999984 45
Q ss_pred hHHHHHH
Q 027575 205 GISLFFK 211 (221)
Q Consensus 205 ~~~~~~~ 211 (221)
.++..+-
T Consensus 288 hIK~hYy 294 (324)
T COG0435 288 HIKLHYY 294 (324)
T ss_pred Hhhhhhe
Confidence 5554443
No 59
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.63 E-value=2.8e-15 Score=109.12 Aligned_cols=125 Identities=14% Similarity=0.198 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHhhhh-hhhHHhhc-CCc-hHHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHHHHHHH
Q 027575 90 YDRALARFWIKFGEDK-GVAVWKMF-HSN-QDEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLYWLQIL 166 (221)
Q Consensus 90 ~~~a~~~~~~~~~~~~-~~~~~~~~-~~~-~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~ 166 (221)
+.++++++|+++..+. .+.+...+ ..+ +..+.....+.+.|+.| |+.|++++|++|+++|+||+++++.+.++...
T Consensus 3 ~~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L-E~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~ 81 (142)
T cd03190 3 ELRSEIDELNEWIYDNINNGVYKAGFATTQEAYDEAVDELFEALDRL-EELLSDRRYLLGDRLTEADIRLFTTLIRFDAV 81 (142)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHhhccCHHHHHHHHHHHHHHHHHH-HHHHccCCeeeCCCccHHHHHHHHHHHHHHHH
Confidence 4588899999999988 55554443 233 55677888999999999 99999899999999999999999988776332
Q ss_pred H-HHhcccccCCCCCchHHHHHHHHhcCcchhccCCChhhHHHHHHHHHH
Q 027575 167 E-DIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDRDGISLFFKRRRE 215 (221)
Q Consensus 167 ~-~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 215 (221)
. ............+|+|.+|++++.++|++++++........+++.+++
T Consensus 82 ~~~~~~~~~~~~~~~P~L~~w~~r~~~~P~~k~~~~~~~~~~~~~~~~~~ 131 (142)
T cd03190 82 YVQHFKCNLKRIRDYPNLWNYLRRLYQNPGVAETTNFDHIKQHYYGSHFP 131 (142)
T ss_pred hhhhcccccchhhhCchHHHHHHHHhcCchHhhhcCHHHHHHHHHhhcCC
Confidence 1 111111111348999999999999999999999988888888887765
No 60
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.63 E-value=3.7e-15 Score=103.19 Aligned_cols=104 Identities=19% Similarity=0.284 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHhhhh-hhhHHhhcCCc-hHHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHHHHHHH
Q 027575 89 PYDRALARFWIKFGEDK-GVAVWKMFHSN-QDEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLYWLQIL 166 (221)
Q Consensus 89 ~~~~a~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~ 166 (221)
|.+|++++.|+.+++.. .+.+...+... +..+.....+.+.+..| |..|++++|++|+++|+|||++++.+.++..
T Consensus 1 p~~ra~~r~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~- 78 (107)
T cd03186 1 PVARARSRLLMHRIEQDWYPLVDTIEKGRKKEAEKARKELRESLLAL-APVFAHKPYFMSEEFSLVDCALAPLLWRLPA- 78 (107)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH-HHHHcCCCcccCCCCcHHHHHHHHHHHHHHH-
Confidence 35799999999999887 55554444333 55667788999999999 9999999999999999999999998765532
Q ss_pred HHHhcccccCCCCCchHHHHHHHHhcCcchhcc
Q 027575 167 EDIVGVKLFDSHKFPGLHAWFENFKKAPVIEEN 199 (221)
Q Consensus 167 ~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 199 (221)
.+.+. ...+|++++|++++.++|+++++
T Consensus 79 ---~~~~~--~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 79 ---LGIEL--PKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred ---cCCCC--cccchHHHHHHHHHHCCHHHHHh
Confidence 24433 24799999999999999999875
No 61
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.62 E-value=3.5e-15 Score=106.16 Aligned_cols=119 Identities=21% Similarity=0.401 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHhcccCC--CCeeecCCCchhHHHHHHHHHHHHHHHH
Q 027575 91 DRALARFWIKFGEDKGVAVWKMFHSNQDEESRMKEILEMLQTIEEHGIGE--KKIFHGDKIGSLEIAFGSMLYWLQILED 168 (221)
Q Consensus 91 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~e~~L~~--~~~l~G~~~t~aD~~l~~~l~~~~~~~~ 168 (221)
+||+.+.|+.+++..++.+...+...+..+...+.+.+.++.| |+.|++ ++|++|+++|+||+++++.+.++.....
T Consensus 2 ~ra~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~~ 80 (124)
T cd03184 2 EKAQQKLLLERFSKVVSAFYKLLGAPSDREEKKAELRSALENL-EEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALKL 80 (124)
T ss_pred hHHHHHHHHHHHhhhhHHHHHHHhccccchhhHHHHHHHHHHH-HHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHHh
Confidence 5899999999997556666555553445567788999999999 999975 7999999999999999999888754432
Q ss_pred HhcccccCCCCCchHHHHHHHHhcCcchhccCCChhhHHHHHH
Q 027575 169 IVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDRDGISLFFK 211 (221)
Q Consensus 169 ~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 211 (221)
..+. ......+|++++|+++|.++|++++++.+.+.+...++
T Consensus 81 ~~~~-~~~~~~~p~l~~w~~r~~~~p~v~~~~~~~~~~~~~~~ 122 (124)
T cd03184 81 LLGY-EFPLDRFPKLKKWMDAMKEDPAVQAFYTDTEIHAEFLK 122 (124)
T ss_pred hccc-cCCcccChHHHHHHHHhccChHHHHHhCCHHHHHHHHh
Confidence 2121 12246899999999999999999999999888877765
No 62
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.62 E-value=7.6e-15 Score=106.37 Aligned_cols=178 Identities=17% Similarity=0.219 Sum_probs=122.2
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEe-CCccccchHHHHHHHHhhCCCC
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH-GEKPVCDSMVILEYIEEMWPQS 82 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~-~~~~i~es~~I~~yL~~~~~~~ 82 (221)
|+||-+..||||-|+|++.-.++||++......+ +..-..+-++. .+||+|+. +|..+.||..|++|+++..+++
T Consensus 1 MkLYIYdHCPfcvrarmi~Gl~nipve~~vL~nD--De~Tp~rmiG~--KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~~ 76 (215)
T COG2999 1 MKLYIYDHCPFCVRARMIFGLKNIPVELHVLLND--DEETPIRMIGQ--KQVPILQKEDGRAMPESLDIVHYVDELDGKP 76 (215)
T ss_pred CceeEeccChHHHHHHHHhhccCCChhhheeccC--cccChhhhhcc--cccceEEccccccchhhhHHHHHHHHhcCch
Confidence 6899999999999999999999999999888765 32223334454 48999995 8899999999999999998754
Q ss_pred CCCC-CCHHHHHHHHHHHHHhhhh-hhhH-------------HhhcCCc------------hHHHHHHHHHHHHHHHHHh
Q 027575 83 PLMP-NDPYDRALARFWIKFGEDK-GVAV-------------WKMFHSN------------QDEESRMKEILEMLQTIEE 135 (221)
Q Consensus 83 ~l~p-~~~~~~a~~~~~~~~~~~~-~~~~-------------~~~~~~~------------~~~~~~~~~~~~~l~~l~e 135 (221)
-+.. ..|+-.+..+..-...+.. +|.+ +.+|..+ ........++...++.| +
T Consensus 77 ~lt~~~~pai~~wlrkv~~y~nkll~PR~~k~~l~EF~T~sA~~yf~~KKe~s~g~F~~~l~~t~~~~~~i~~dl~~l-~ 155 (215)
T COG2999 77 LLTGKVRPAIEAWLRKVNGYLNKLLLPRFAKSALPEFATPSARKYFTDKKEASEGSFESLLNHTAQYLKRIQADLRAL-D 155 (215)
T ss_pred hhccCcCHHHHHHHHHhcchHhhhhhhhHhhcCCccccCHHHHHHHHhhhhhccccHHHHHhchHHHHHHHHHHHHHH-H
Confidence 4443 2444444444333333322 3332 2222221 11234577888888999 8
Q ss_pred cccCCCCeeecCCCchhHHHHHHHHHHHHHHHHHhcccccCCCCC-chHHHHHHHHhcCcch
Q 027575 136 HGIGEKKIFHGDKIGSLEIAFGSMLYWLQILEDIVGVKLFDSHKF-PGLHAWFENFKKAPVI 196 (221)
Q Consensus 136 ~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~-p~l~~~~~~~~~~p~~ 196 (221)
..+.+..-+ .+.++.-|+.++++|+.+..+. |. ++ .++..|+.+|.+...+
T Consensus 156 ~Li~~~s~~-n~~l~~ddi~vFplLRnlt~v~---gi------~wps~v~dy~~~msektqV 207 (215)
T COG2999 156 KLIVGPSAV-NGELSEDDILVFPLLRNLTLVA---GI------QWPSRVADYRDNMSEKTQV 207 (215)
T ss_pred HHhcCcchh-ccccchhhhhhhHHhccceecc---cC------CCcHHHHHHHHHHHHhhCc
Confidence 888655433 3459999999999998873321 32 33 4899999999875443
No 63
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=99.61 E-value=2e-15 Score=95.82 Aligned_cols=71 Identities=38% Similarity=0.547 Sum_probs=62.8
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHH
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIE 76 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~ 76 (221)
++||+++.||+|++++++|.++|++|+.+.++.... ...++.+.+|. +++|+|+++|..++||.+|++||+
T Consensus 1 ~~ly~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~-~~~~~~~~~~~-~~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 1 LKLYYFPGSPRSLRVRLALEEKGLPYELVPVDLGEG-EQEEFLALNPL-GKVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEeCCCCC-CCHHHHhcCCC-CCCCEEEECCEEEEcHHHHHHHhC
Confidence 589999999999999999999999999999886521 12258889998 899999999999999999999984
No 64
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.61 E-value=6.5e-15 Score=103.32 Aligned_cols=108 Identities=18% Similarity=0.273 Sum_probs=85.4
Q ss_pred CCHHHHHHHHHHHHHhhhh-hhhHHhhcCCc----hHHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHH
Q 027575 87 NDPYDRALARFWIKFGEDK-GVAVWKMFHSN----QDEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLY 161 (221)
Q Consensus 87 ~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~ 161 (221)
.+|.+++++++|..+.+.. .+.+....... +..+.....+.+.++.| |+.|++++|++|+++|+|||++++.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l-e~~L~~~~yl~Gd~~tlADi~l~~~l~ 80 (115)
T cd03196 2 QDPAALKEMLALIAENDNEFKHHLDRYKYADRYPEESEEEYRQQAEAFLKDL-EARLQQHSYLLGDKPSLADWAIFPFVR 80 (115)
T ss_pred CchHHHHHHHHHHHHcchhhHHHHHhccchhhcCcccHHHHHHHHHHHHHHH-HHHHccCCccCCCCccHHHHHHHHHHH
Confidence 3788999999999999888 66554422211 34667788999999999 999998999999999999999998877
Q ss_pred HHHHHHHHhcccccCCCCCchHHHHHHHHhcCcchhcc
Q 027575 162 WLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEEN 199 (221)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 199 (221)
++... .........+|+|++|++++.++|+|+++
T Consensus 81 ~~~~~----~~~~~~~~~~P~L~~w~~r~~~rpa~~~~ 114 (115)
T cd03196 81 QFAHV----DPKWFDQSPYPRLRRWLNGFLASPLFSKI 114 (115)
T ss_pred HHHHh----hhcccCcccCHHHHHHHHHHHcChHHHhh
Confidence 66432 11112236899999999999999999985
No 65
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=99.57 E-value=8.3e-15 Score=94.10 Aligned_cols=65 Identities=28% Similarity=0.376 Sum_probs=57.9
Q ss_pred eEEeccC-------CChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHH
Q 027575 4 VKLLGTL-------PSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIE 76 (221)
Q Consensus 4 ~~Ly~~~-------~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~ 76 (221)
++||.++ .||+|++++++|+++|++|+.+.++.. . .||. |++|+|+++|..++||.+|++||+
T Consensus 1 ~~L~~~~~~~~~~s~sp~~~~v~~~L~~~~i~~~~~~~~~~--~-------~~p~-g~vP~l~~~g~~l~es~~I~~yL~ 70 (72)
T cd03054 1 LELYQWGRAFGLPSLSPECLKVETYLRMAGIPYEVVFSSNP--W-------RSPT-GKLPFLELNGEKIADSEKIIEYLK 70 (72)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHhCCCceEEEecCCc--c-------cCCC-cccCEEEECCEEEcCHHHHHHHHh
Confidence 3577766 899999999999999999999998764 1 7898 899999999999999999999998
Q ss_pred hh
Q 027575 77 EM 78 (221)
Q Consensus 77 ~~ 78 (221)
++
T Consensus 71 ~~ 72 (72)
T cd03054 71 KK 72 (72)
T ss_pred hC
Confidence 74
No 66
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.56 E-value=3.6e-14 Score=101.22 Aligned_cols=103 Identities=15% Similarity=0.257 Sum_probs=82.8
Q ss_pred hhhHHhhcCCc--hHHHHHHHHHHHHHHHHHhcccCC----------------CCeeecCCCchhHHHHHHHHHHHHHHH
Q 027575 106 GVAVWKMFHSN--QDEESRMKEILEMLQTIEEHGIGE----------------KKIFHGDKIGSLEIAFGSMLYWLQILE 167 (221)
Q Consensus 106 ~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~e~~L~~----------------~~~l~G~~~t~aD~~l~~~l~~~~~~~ 167 (221)
++.+..++... +..+.....+.+.|..| |.+|++ ++|++|+++|+|||++++.+.++..+.
T Consensus 12 f~~~~~~~~~~~~~~~e~~~~~l~~~L~~l-d~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~ 90 (134)
T cd03198 12 FAKFSAYIKNSNPALNENLEKGLLKALKKL-DDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVA 90 (134)
T ss_pred HHHHHHHHcCCChhhhHHHHHHHHHHHHHH-HHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 67776666654 55677788999999999 999976 679999999999999999988775432
Q ss_pred H-HhcccccCCCCCchHHHHHHHHhcCcchhccCCChhhHHHHHH
Q 027575 168 D-IVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDRDGISLFFK 211 (221)
Q Consensus 168 ~-~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 211 (221)
. ..+.+. ...+|+|++|++++.+||+|++++...+.+...++
T Consensus 91 ~~~~g~~i--~~~~P~L~aw~~ri~aRPsfk~t~~~~~~i~~~~~ 133 (134)
T cd03198 91 KKYRNFEI--PADLTGLWRYLKNAYQREEFTNTCPADQEIELAYK 133 (134)
T ss_pred HhhcCCCc--cccCHHHHHHHHHHHCCHHHHHHcCCHHHHHHHhc
Confidence 1 124333 36899999999999999999999999888876654
No 67
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.53 E-value=5.3e-14 Score=98.24 Aligned_cols=102 Identities=17% Similarity=0.330 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHhhhh-hhhHHhhcCC------c----hHHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHH
Q 027575 91 DRALARFWIKFGEDK-GVAVWKMFHS------N----QDEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSM 159 (221)
Q Consensus 91 ~~a~~~~~~~~~~~~-~~~~~~~~~~------~----~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~ 159 (221)
+++++++|+.+.++. .+.+...+.. . ...+.....+.+.+..| |+.|++++|++|+++|+|||++++.
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~l~~~~~l~G~~~t~aDi~~~~~ 80 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPLFYPARWATDEAAQEEVKAAARERLAARLAYL-DAQLAGGPYLLGDRFSVADAYLFVV 80 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhcccccccccChhhHHHHHHHHHHHHHHHHHHH-HHHhcCCCeeeCCCcchHHHHHHHH
Confidence 588999999999877 5554332211 1 22355678899999999 9999988999999999999999998
Q ss_pred HHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcchhccC
Q 027575 160 LYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENL 200 (221)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 200 (221)
+.++... +.+ ...+|++.+|++++.++|+|++++
T Consensus 81 ~~~~~~~----~~~---~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 81 LRWAPGV----GLD---LSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHHhhc----CCC---hhhChHHHHHHHHHHhCHHhHhhC
Confidence 8877421 321 347999999999999999999864
No 68
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.53 E-value=3e-14 Score=109.23 Aligned_cols=206 Identities=20% Similarity=0.253 Sum_probs=143.6
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceE--EEccc----cCccC--------------------------chHHHhhCCC
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEF--VEEDV----FSNEK--------------------------SALLLKYNPV 51 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~--~~v~~----~~~~~--------------------------~~~~~~~~p~ 51 (221)
+-||..-.|||+.|..++++.+|++=.. ..+.+ ....+ ++-|...+|.
T Consensus 38 yhLYvslaCPWAhRtLi~r~LKGL~~~i~~s~v~~~~d~~gW~F~~~~~~~nDs~~l~~~~d~~~g~k~l~elY~~~~p~ 117 (319)
T KOG2903|consen 38 YHLYVSLACPWAHRTLIVRALKGLEPAIGVSVVHWHLDDKGWRFLDEHIIINDSERLGVTPDPLNGAKRLRELYYIASPN 117 (319)
T ss_pred EEEEEeccCcHHHHHHHHHHHcCccccceeEEeccccCCCcccCCCcccCCCchhcccCCCcccccchhHHHHHhhcCCC
Confidence 6799999999999999999999995111 11111 00000 1112222342
Q ss_pred C-C--cccEEEeC---CccccchHHHHHHHHhhC---------CCCCCCCCCHHHHHHHHHHHHHhhhhhh-hH-HhhcC
Q 027575 52 H-K--KIPVLVHG---EKPVCDSMVILEYIEEMW---------PQSPLMPNDPYDRALARFWIKFGEDKGV-AV-WKMFH 114 (221)
Q Consensus 52 ~-g--~vP~L~~~---~~~i~es~~I~~yL~~~~---------~~~~l~p~~~~~~a~~~~~~~~~~~~~~-~~-~~~~~ 114 (221)
+ | +||||-+- ..+-.||..|++.+...| +.-.|+|.+ .+++++.+.+++.+... -+ .--|.
T Consensus 118 Y~grfTVPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~lDL~P~~--L~~~Ide~N~wvy~~INNGVYk~GFA 195 (319)
T KOG2903|consen 118 YTGRFTVPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVLDLYPSS--LRAQIDETNSWVYDKINNGVYKCGFA 195 (319)
T ss_pred CCceEEEEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCccccCCHH--HHHHHhhhhceecccccCceeeeccc
Confidence 2 2 79999973 345589999999998333 223477776 58899999888887722 22 22344
Q ss_pred Cc-hHHHHHHHHHHHHHHHHHhcccCCCC--eeecCCCchhHHHHHHHHHHHHH-HHHHhcc--cccCCCCCchHHHHHH
Q 027575 115 SN-QDEESRMKEILEMLQTIEEHGIGEKK--IFHGDKIGSLEIAFGSMLYWLQI-LEDIVGV--KLFDSHKFPGLHAWFE 188 (221)
Q Consensus 115 ~~-~~~~~~~~~~~~~l~~l~e~~L~~~~--~l~G~~~t~aD~~l~~~l~~~~~-~~~~~~~--~~~~~~~~p~l~~~~~ 188 (221)
.. +..+.....+-+.|+.+ |+.|+++. |++|+++|.||+.|++.+-++.. ...++.+ ..+ ..+||+|..|..
T Consensus 196 ~~~e~Ye~~V~~lfe~LDr~-E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~i-r~~Yp~l~~~lk 273 (319)
T KOG2903|consen 196 EKQEAYEEEVNQLFEALDRC-EDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTI-RDEYPNLHNWLK 273 (319)
T ss_pred cccchHHHHHHHHHHHHHHH-HHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhh-hccCcHHHHHHH
Confidence 44 77788899999999999 99998776 99999999999999998777732 2222222 222 459999999999
Q ss_pred HHhc-CcchhccCCChhhHHHHHHHHH
Q 027575 189 NFKK-APVIEENLPDRDGISLFFKRRR 214 (221)
Q Consensus 189 ~~~~-~p~~~~~~~~~~~~~~~~~~~~ 214 (221)
.+.+ .|.|+.+. +.+.++..+-+..
T Consensus 274 ~iY~~~~~~~~Tt-d~~hIk~~Y~~S~ 299 (319)
T KOG2903|consen 274 NIYWNIPGFSSTT-DFNHIKLHYYRSH 299 (319)
T ss_pred HHHhhccchhhcc-chhHHhhhhcccc
Confidence 9999 99999887 5566666555433
No 69
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.51 E-value=1.9e-13 Score=96.61 Aligned_cols=103 Identities=12% Similarity=0.281 Sum_probs=79.0
Q ss_pred hhhHHhhcCCchHHHHHHHHHHHHHHHHHhcccCC-CCeeecCCCchhHHHHHHHHHHHHHHHH-HhcccccCCCCCchH
Q 027575 106 GVAVWKMFHSNQDEESRMKEILEMLQTIEEHGIGE-KKIFHGDKIGSLEIAFGSMLYWLQILED-IVGVKLFDSHKFPGL 183 (221)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~e~~L~~-~~~l~G~~~t~aD~~l~~~l~~~~~~~~-~~~~~~~~~~~~p~l 183 (221)
++.+..++......++....+.+.|+.| |..|++ ++|++|+++|+||+++++.+.++..... ..+... ...+|++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~l~~~l~~L-e~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~--~~~~P~l 91 (121)
T cd03201 15 FSTFVGFLKSKDSNDGTEQALLDELEAL-EDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSV--PESLTSV 91 (121)
T ss_pred HHHHHHHHHCCcHHHHHHHHHHHHHHHH-HHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCC--cccchHH
Confidence 5555555554433355677899999999 999984 7999999999999999998877753222 112222 3689999
Q ss_pred HHHHHHHhcCcchhccCCChhhHHHHHH
Q 027575 184 HAWFENFKKAPVIEENLPDRDGISLFFK 211 (221)
Q Consensus 184 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 211 (221)
.+|++++.+||+|+++++..+.+...++
T Consensus 92 ~~w~~rl~~rps~~~t~~~~~~~~~~~~ 119 (121)
T cd03201 92 KSYMKALFSRESFVKTKAEKEDVIAGWA 119 (121)
T ss_pred HHHHHHHHCCchhhhcCCCHHHHHHHhc
Confidence 9999999999999999998888766654
No 70
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.51 E-value=1.4e-13 Score=97.41 Aligned_cols=108 Identities=18% Similarity=0.259 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhcCCc---hHHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHHHHHHHH
Q 027575 91 DRALARFWIKFGEDKGVAVWKMFHSN---QDEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLYWLQILE 167 (221)
Q Consensus 91 ~~a~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~ 167 (221)
+++++++++..+.+....+..++..+ ...+.....+.+.+..| |++|++++|++|+++|+||+++++.+.++...
T Consensus 2 e~~~id~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~~- 79 (121)
T cd03209 2 ERIRVDMLEQQAMDLRMGLARICYSPDFEKLKPDYLAKLPDKLKLF-SDFLGDRPWFAGDKITYVDFLLYEALDQHRIF- 79 (121)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHH-HHHhCCCCCcCCCCccHHHHHHHHHHHHHHHh-
Confidence 57888888888888755454433322 34455678899999999 99999889999999999999999998888432
Q ss_pred HHhcccccCCCCCchHHHHHHHHhcCcchhccCCChhh
Q 027575 168 DIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDRDG 205 (221)
Q Consensus 168 ~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~ 205 (221)
+... ...+|++.+|++++.++|++++++++...
T Consensus 80 ---~~~~--~~~~P~l~~~~~rv~~~p~vk~~~~~~~~ 112 (121)
T cd03209 80 ---EPDC--LDAFPNLKDFLERFEALPKISAYMKSDRF 112 (121)
T ss_pred ---Cccc--cccChHHHHHHHHHHHCHHHHHHHhcccC
Confidence 2222 35899999999999999999999887653
No 71
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.51 E-value=2.4e-13 Score=95.46 Aligned_cols=102 Identities=16% Similarity=0.319 Sum_probs=80.7
Q ss_pred CHHHHHHHHHHHHHhhhh-hhhHHhhc------CC----c----hHHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchh
Q 027575 88 DPYDRALARFWIKFGEDK-GVAVWKMF------HS----N----QDEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSL 152 (221)
Q Consensus 88 ~~~~~a~~~~~~~~~~~~-~~~~~~~~------~~----~----~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~a 152 (221)
|+.+++++++|+.+++.. ++.+...+ .. + +..++...++.+.|..| |+.|++++|++|+++|+|
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l-e~~L~~~~~l~gd~~t~a 79 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYL-DTRLAGSPYVAGDRFTIA 79 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHH-HHHhcCCCcccCCCCCHH
Confidence 577899999999998777 55543221 01 1 33566788899999999 999998899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcch
Q 027575 153 EIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVI 196 (221)
Q Consensus 153 D~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 196 (221)
||++++.+.++... +.++ ...+|++.+|++++.++|++
T Consensus 80 Di~l~~~~~~~~~~----~~~~--~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 80 DITAFVGLDFAKVV----KLRV--PEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHHhHHHHhc----CCCC--ccccHHHHHHHHHHHhccCC
Confidence 99999999887432 4433 35899999999999999974
No 72
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.49 E-value=6.4e-13 Score=93.92 Aligned_cols=114 Identities=19% Similarity=0.356 Sum_probs=80.5
Q ss_pred CHHHHHHHHHHHHHhhhhhhhH-HhhcCCchHHHHHHHHHHHHHHHHHhcccC---CCCeeecCCCchhHHHHHHHHHHH
Q 027575 88 DPYDRALARFWIKFGEDKGVAV-WKMFHSNQDEESRMKEILEMLQTIEEHGIG---EKKIFHGDKIGSLEIAFGSMLYWL 163 (221)
Q Consensus 88 ~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~e~~L~---~~~~l~G~~~t~aD~~l~~~l~~~ 163 (221)
|+.+|+++++++.+.......+ .+.++... ...+.+.++.| |+.|+ +++|++| ++|+|||++++.+.++
T Consensus 1 d~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~L-e~~L~~~~~~~fl~G-~~tlADi~l~~~~~~~ 73 (120)
T cd03203 1 DPAKREFADELLAYTDAFTKALYSSLIKGDP-----SAEAAAALDYI-ENALSKFDDGPFFLG-QFSLVDIAYVPFIERF 73 (120)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----hHHHHHHHHHH-HHHHHhcCCCCCcCC-CccHHHHHHHHHHHHH
Confidence 5778999999988833222222 23332221 22345566777 66665 5789999 9999999999998877
Q ss_pred HHH-HHHhcccccCCCCCchHHHHHHHHhcCcchhccCCChhhHHHHH
Q 027575 164 QIL-EDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDRDGISLFF 210 (221)
Q Consensus 164 ~~~-~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~ 210 (221)
... ....+.++ ...+|++.+|+++|.++|+|+++.++.+.+...+
T Consensus 74 ~~~~~~~~~~~~--~~~~P~l~~W~~~~~~rp~~~~~~~~~~~~~~~~ 119 (120)
T cd03203 74 QIFLSELFNYDI--TEGRPNLAAWIEEMNKIEAYTQTKQDPQELLDLA 119 (120)
T ss_pred HHHHHHhcCccc--cccCcHHHHHHHHHhcchHHHhHcCCHHHHHhhh
Confidence 432 22235443 3589999999999999999999999987776543
No 73
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.48 E-value=3.8e-13 Score=94.80 Aligned_cols=101 Identities=23% Similarity=0.301 Sum_probs=78.5
Q ss_pred CCCHHHHHHHHHHHHHhhhh-hhhHHh-----hcCC---------c--hHHHHHHHHHHHHHHHHHhcccCCCCeeecCC
Q 027575 86 PNDPYDRALARFWIKFGEDK-GVAVWK-----MFHS---------N--QDEESRMKEILEMLQTIEEHGIGEKKIFHGDK 148 (221)
Q Consensus 86 p~~~~~~a~~~~~~~~~~~~-~~~~~~-----~~~~---------~--~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~ 148 (221)
|.++.+++++++|+.+.+.. .+.+.. .+.. . ...+....++.+.++.| |+.|++++|++|++
T Consensus 2 ~~~~~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~Gd~ 80 (119)
T cd03189 2 PPDTAEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFL-EDRLAKKGYFVGDK 80 (119)
T ss_pred CCCHHHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHH-HHHHccCCCCCCCC
Confidence 57889999999999998776 544421 1121 1 22344567899999999 99999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCc
Q 027575 149 IGSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAP 194 (221)
Q Consensus 149 ~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p 194 (221)
+|+|||++++.+.++... +. ....+|++.+|++++.++|
T Consensus 81 ~t~ADi~l~~~~~~~~~~----~~---~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 81 LTAADIMMSFPLEAALAR----GP---LLEKYPNIAAYLERIEARP 119 (119)
T ss_pred CCHHHHHHHHHHHHHHHc----Cc---ccccCchHHHHHHHHhcCC
Confidence 999999999988887421 22 1458999999999999986
No 74
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.47 E-value=4.4e-13 Score=95.56 Aligned_cols=107 Identities=22% Similarity=0.272 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhcCCc--hHHHHHHHHHHHHHHHHHhcccCC---CCeeecCCCchhHHHHHHHHHHHHH
Q 027575 91 DRALARFWIKFGEDKGVAVWKMFHSN--QDEESRMKEILEMLQTIEEHGIGE---KKIFHGDKIGSLEIAFGSMLYWLQI 165 (221)
Q Consensus 91 ~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~e~~L~~---~~~l~G~~~t~aD~~l~~~l~~~~~ 165 (221)
+++.+++++..+.+.+..+..++..+ ...+.....+.+.+..| |+.|++ ++|++|+++|+||+++++.+.++..
T Consensus 3 e~~~vd~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~ 81 (126)
T cd03210 3 EAALIDMVNDGVEDLRLKYVRMIYQNYEAGKDDYIKDLPEQLKPF-EKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLV 81 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH-HHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHH
Confidence 57788888888777755555444433 34456677789999999 999974 5899999999999999999888853
Q ss_pred HHHHhcccccCCCCCchHHHHHHHHhcCcchhccCCChh
Q 027575 166 LEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDRD 204 (221)
Q Consensus 166 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 204 (221)
. +... ...+|+|.+|++++.++|++++++....
T Consensus 82 ~----~~~~--~~~~P~l~~~~~rv~~~p~v~~~~~~~~ 114 (126)
T cd03210 82 L----APGC--LDAFPLLKAFVERLSARPKLKAYLESDA 114 (126)
T ss_pred h----ChHh--hhcChHHHHHHHHHHhCcHHHHHHhCcC
Confidence 2 1112 3589999999999999999999887654
No 75
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.44 E-value=9.5e-13 Score=92.46 Aligned_cols=104 Identities=17% Similarity=0.319 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHhhhh-hhhHHh---------hcCCc---hHHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHH
Q 027575 91 DRALARFWIKFGEDK-GVAVWK---------MFHSN---QDEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFG 157 (221)
Q Consensus 91 ~~a~~~~~~~~~~~~-~~~~~~---------~~~~~---~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~ 157 (221)
+|+++.+|+.+.... .+.+.. ..+.. +..++....+.+.++.| |+.|++++|++|+++|+|||+++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~t~aDi~l~ 80 (118)
T cd03187 2 ERAIVEQWLEVESHQFDPPASALAFELVFKPMLGLPTDEAVVEENEEKLKKVLDVY-EARLSKSKYLAGDSFTLADLSHL 80 (118)
T ss_pred chHHHHHHHHHHHhhcchhHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH-HHHcccCcccCCCCccHHHHHHH
Confidence 578888998887655 333211 11111 34456778999999999 99999899999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcchhccC
Q 027575 158 SMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENL 200 (221)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 200 (221)
+.+.++... +.... ...+|++++|++++.++|++++++
T Consensus 81 ~~~~~~~~~----~~~~~-~~~~p~l~~~~~~~~~~p~~~~~~ 118 (118)
T cd03187 81 PYLQYLMAT----PFAKL-FDSRPHVKAWWEDISARPAWKKVL 118 (118)
T ss_pred HHHHHHHHc----cchhh-hhcCchHHHHHHHHHhCHHHHhhC
Confidence 988887421 11111 347999999999999999998764
No 76
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.43 E-value=7.4e-13 Score=93.25 Aligned_cols=104 Identities=20% Similarity=0.357 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHhhhh-hhhHHhh-----cCCchHHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHHHHH
Q 027575 91 DRALARFWIKFGEDK-GVAVWKM-----FHSNQDEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLYWLQ 164 (221)
Q Consensus 91 ~~a~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~ 164 (221)
+++++.+|+.+.... .+.+... +..++..+....++.+.++.| |+.|++++|++|+++|+||+++++.+.++.
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~s~aDi~l~~~~~~~~ 80 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDYYYPILFGGAEPPEEKLDKLEEALDFL-ETFLEGSDYVAGDQLTIADLSLVATVSTLE 80 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH-HHHHccCCeeCCCCcCHHHHHHHHHHHHHH
Confidence 578899999888665 4333221 122234456678899999999 999998899999999999999999998884
Q ss_pred HHHHHhcccccCCCCCchHHHHHHHHhcCcchhccCC
Q 027575 165 ILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLP 201 (221)
Q Consensus 165 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 201 (221)
.. .+.+ ...+|++++|++++.++|+|++...
T Consensus 81 ~~---~~~~---~~~~p~l~~w~~~~~~~p~~~~~~~ 111 (118)
T cd03177 81 AL---LPLD---LSKYPNVRAWLERLKALPPYEEANG 111 (118)
T ss_pred Hh---cCCC---hhhCchHHHHHHHHHcccchHHHHH
Confidence 31 1321 3479999999999999999998653
No 77
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.42 E-value=1.7e-12 Score=93.87 Aligned_cols=107 Identities=18% Similarity=0.251 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhcCC-chHHH----H-HHHHHHHHHHHHHhcccC--CCCeeecCCCchhHHHHHHHHHH
Q 027575 91 DRALARFWIKFGEDKGVAVWKMFHS-NQDEE----S-RMKEILEMLQTIEEHGIG--EKKIFHGDKIGSLEIAFGSMLYW 162 (221)
Q Consensus 91 ~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~-~~~~~~~~l~~l~e~~L~--~~~~l~G~~~t~aD~~l~~~l~~ 162 (221)
+++.+++++..+.+....+..++.. ++.++ . ..+.+.+.|..| |+.|+ +++|++|+++|+||+++++.+.+
T Consensus 3 e~a~iD~i~~~v~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-E~~L~~~~~~~l~G~~~T~ADi~l~~~l~~ 81 (137)
T cd03208 3 ERALIDMYVEGTADLMEMILMLPFLPPEEKEAKLALIKEKAKNRYFPVF-EKVLKSHGQDFLVGNKLSRADIHLLEAILM 81 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCChhhHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCCeeeCCCCCHHHHHHHHHHHH
Confidence 5778888888887774444433332 22221 2 234567999999 99997 67899999999999999999988
Q ss_pred HHHHHHHhcccccCCCCCchHHHHHHHHhcCcchhccCCChh
Q 027575 163 LQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDRD 204 (221)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 204 (221)
+... .... ...+|+|++|++++.++|++++++....
T Consensus 82 ~~~~----~~~~--l~~~P~l~~~~~rv~~~P~vk~~~~~~~ 117 (137)
T cd03208 82 VEEL----DPSL--LSDFPLLQAFKTRISNLPTIKKFLQPGS 117 (137)
T ss_pred HHHh----chhh--hccChHHHHHHHHHHcCHHHHHHHhcCC
Confidence 7432 2222 3589999999999999999999887544
No 78
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.42 E-value=1.7e-12 Score=91.75 Aligned_cols=106 Identities=18% Similarity=0.172 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHhhhh-hhhH----Hhhc----CCc--hHHHHHHHHHHHHHHHHHhcccC--CCCeeecCCCchhHHH
Q 027575 89 PYDRALARFWIKFGEDK-GVAV----WKMF----HSN--QDEESRMKEILEMLQTIEEHGIG--EKKIFHGDKIGSLEIA 155 (221)
Q Consensus 89 ~~~~a~~~~~~~~~~~~-~~~~----~~~~----~~~--~~~~~~~~~~~~~l~~l~e~~L~--~~~~l~G~~~t~aD~~ 155 (221)
|.+++++++|+.++++. .+.+ ...+ +.+ ...+...+.+.+.|..| |+.|+ +++|++|+++|+||++
T Consensus 1 p~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~~~l~G~~~t~ADi~ 79 (121)
T cd03191 1 PKKRARVRALALIIACDIHPLNNLRVLKYLTEELGLDEEAKNAWYRHWIARGFAAL-EKLLAQTAGKFCFGDEPTLADIC 79 (121)
T ss_pred ChhHHHHHHHHHHHHccCCccccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHhcCCCeecCCcCCHHHHH
Confidence 35789999999998866 4321 1111 111 22233456789999999 99997 4579999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcchhccCCC
Q 027575 156 FGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPD 202 (221)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 202 (221)
+++.+.++... +.+ ...+|++++|++++.++|+|+++.+.
T Consensus 80 ~~~~~~~~~~~----~~~---~~~~p~l~~w~~~~~~~p~~~~~~~~ 119 (121)
T cd03191 80 LVPQVYNARRF----GVD---LSPYPTIARINEACLELPAFQAAHPD 119 (121)
T ss_pred HHHHHHHHHHh----CCC---cccCcHHHHHHHHHHhChhHHHhCcC
Confidence 99988876421 322 35899999999999999999998764
No 79
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.42 E-value=8.3e-13 Score=93.53 Aligned_cols=109 Identities=17% Similarity=0.333 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHhhhh-hhhHHh----hcCC---c-hHHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHH
Q 027575 91 DRALARFWIKFGEDK-GVAVWK----MFHS---N-QDEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLY 161 (221)
Q Consensus 91 ~~a~~~~~~~~~~~~-~~~~~~----~~~~---~-~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~ 161 (221)
+++++++|+.+.+.. .+.+.. ..+. + ...+.....+.+.++.| |+.|++++|+.|+++|+||+++++.+.
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~l~~~~~l~G~~~siaDi~l~~~~~ 79 (123)
T cd03181 1 EEAQVLQWVSFANTELLPAVAAWFLPLLGIAPYNKKSVEAALEELDRVLGVL-EERLLKRTYLVGERLTLADIFVAGALL 79 (123)
T ss_pred ChHHHHHHHHHHHhhhHHHHHHHHHHHcCccCCCHHHHHHHHHHHHHHHHHH-HHHHccCceeccCCccHHHHHHHHHHH
Confidence 367889999888777 444422 2221 1 44566788899999999 999998899999999999999999888
Q ss_pred HHHHHHHHhcccccCCCCCchHHHHHHHHhcCcchhccCCChh
Q 027575 162 WLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLPDRD 204 (221)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 204 (221)
++.... .+.+. ...+|++++|++++.++|+|++++.+.+
T Consensus 80 ~~~~~~--~~~~~--~~~~p~l~~w~~~~~~~p~~~~~~~~~~ 118 (123)
T cd03181 80 LGFTYV--FDKEW--RAKYPNVTRWFNTVVNQPIFKAVFGEVK 118 (123)
T ss_pred HHHHHH--cCHHH--HHhChHHHHHHHHHHcCHHHHHHcCCCC
Confidence 873211 01111 2478999999999999999999987744
No 80
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.41 E-value=5.9e-13 Score=92.89 Aligned_cols=103 Identities=17% Similarity=0.350 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHhhhh-hhhHHh-----hcCCc---hHHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHH
Q 027575 91 DRALARFWIKFGEDK-GVAVWK-----MFHSN---QDEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLY 161 (221)
Q Consensus 91 ~~a~~~~~~~~~~~~-~~~~~~-----~~~~~---~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~ 161 (221)
+++++++|+.+.+.. .+.+.. .+..+ ...+....++.+.++.+ |+.|++++|++|+++|+|||++++.+.
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~t~aDi~l~~~~~ 79 (113)
T cd03178 1 ERYEVLQWLFFQMGGLGPMFGQAGHFSRYAPEKIPYAIERYTNEAKRLYGVL-DKRLAGRDYLAGDEYSIADIAIFPWVR 79 (113)
T ss_pred ChHHHHHHHHHHHccCCCcchHHHHHHHhCCCCChHHHHHHHHHHHHHHHHH-HHHHccCCcccCCCCCeeeeeHHHHHH
Confidence 478899999988777 443321 12222 34456778899999999 999998899999999999999999888
Q ss_pred HHHHHHHHhcccccCCCCCchHHHHHHHHhcCcchhccC
Q 027575 162 WLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENL 200 (221)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 200 (221)
+.... +.+. ...+|++.+|++++.++|++++++
T Consensus 80 ~~~~~----~~~~--~~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 80 RLEWI----GIDD--LDDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred HHHhc----cccc--hhhchHHHHHHHHHhhCHHHHHhc
Confidence 87432 2222 457999999999999999999864
No 81
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.38 E-value=3.3e-12 Score=88.52 Aligned_cols=98 Identities=14% Similarity=0.375 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHhhhh-hhhHHhh----cCCc------hHHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHH
Q 027575 91 DRALARFWIKFGEDK-GVAVWKM----FHSN------QDEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSM 159 (221)
Q Consensus 91 ~~a~~~~~~~~~~~~-~~~~~~~----~~~~------~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~ 159 (221)
+++++++|+.+.++. .+.+... +..+ ...++..+.+.+.++.| |+.|++++|++|+++|+||+++++.
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-E~~L~~~~~l~g~~~t~aDi~~~~~ 80 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYAFWGLVRTPPEQRDPAAIAASLAAWAKLMAIL-DAQLAGRPYLAGDRFTLADIPLGCS 80 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHHHH-HHHhCCCCcccCCCCCHHHHHHHHH
Confidence 578899999888766 5444321 2211 23455778999999999 9999988999999999999999988
Q ss_pred HHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcch
Q 027575 160 LYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVI 196 (221)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 196 (221)
+.... .. + .....+|++++|++++.++|+|
T Consensus 81 ~~~~~---~~-~---~~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 81 AYRWF---EL-P---IERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHH---Hc-c---cccccCchHHHHHHHHHhCCCC
Confidence 75432 11 2 1246899999999999999985
No 82
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.36 E-value=1.2e-12 Score=89.82 Aligned_cols=77 Identities=16% Similarity=0.325 Sum_probs=65.1
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcch
Q 027575 117 QDEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVI 196 (221)
Q Consensus 117 ~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 196 (221)
+..+....++.+.++.| |+.|++++|++|+++|+|||++++.+.+.... + . ...+|++++|++++.++|++
T Consensus 26 ~~~~~~~~~~~~~l~~l-e~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~----~--~--~~~~p~l~~w~~~~~~~p~~ 96 (103)
T cd03207 26 PARMAGFGSYDDVLAAL-EQALAKGPYLLGERFTAADVLVGSPLGWGLQF----G--L--LPERPAFDAYIARITDRPAF 96 (103)
T ss_pred chhhhhhhhHHHHHHHH-HHHHccCCcccCCccCHHHHHHHHHHHHHHHc----C--C--CCCChHHHHHHHHHHcCHHH
Confidence 34455678899999999 99999899999999999999999999887421 2 2 35799999999999999999
Q ss_pred hccCCC
Q 027575 197 EENLPD 202 (221)
Q Consensus 197 ~~~~~~ 202 (221)
+++.+.
T Consensus 97 ~~~~~~ 102 (103)
T cd03207 97 QRAAAI 102 (103)
T ss_pred HHHhcc
Confidence 988753
No 83
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.33 E-value=8.4e-12 Score=88.81 Aligned_cols=102 Identities=17% Similarity=0.286 Sum_probs=73.7
Q ss_pred HHHHHHHHHHhhhh-hhhHH---------hhcC-C--c-hHHHHHHHHHHHHHHHHHhcc-cCCCCeeecCCCchhHHHH
Q 027575 92 RALARFWIKFGEDK-GVAVW---------KMFH-S--N-QDEESRMKEILEMLQTIEEHG-IGEKKIFHGDKIGSLEIAF 156 (221)
Q Consensus 92 ~a~~~~~~~~~~~~-~~~~~---------~~~~-~--~-~~~~~~~~~~~~~l~~l~e~~-L~~~~~l~G~~~t~aD~~l 156 (221)
++++++|+.+.+.. .+.+. +.+. . . +..+...+.+.+.++.+ |+. +++++|++|+++|+|||++
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~l~~~~~~l~Gd~~t~ADi~l 80 (126)
T cd03183 2 RARVDEYLAWQHTNLRLGCAKYFWQKVLLPLLGGKPVSPEKVKKAEENLEESLDLL-ENYFLKDKPFLAGDEISIADLSA 80 (126)
T ss_pred cccHHHHHHHHHhhhHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH-HHHHhcCCCcccCCCCCHHHHHH
Confidence 45677777777544 32221 1122 1 1 44456778899999999 886 5667899999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhc--CcchhccC
Q 027575 157 GSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKK--APVIEENL 200 (221)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~--~p~~~~~~ 200 (221)
++.+.+.... +.+. ...+|++++|++++.+ +|++++..
T Consensus 81 ~~~~~~~~~~----~~~~--~~~~p~l~~w~~~~~~~~~p~~~~~~ 120 (126)
T cd03183 81 VCEIMQPEAA----GYDV--FEGRPKLAAWRKRVKEAGNPLFDEAH 120 (126)
T ss_pred HHHHHHHHhc----CCcc--cccCchHHHHHHHHHHhcchhHHHHH
Confidence 9987766321 4332 3589999999999999 99998854
No 84
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.33 E-value=9.4e-12 Score=84.33 Aligned_cols=95 Identities=15% Similarity=0.259 Sum_probs=74.0
Q ss_pred HHHHHhhCCCCCCCCCCHHHHHHHHHHHHHhhhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHhcccCCCCeeecCCCch
Q 027575 72 LEYIEEMWPQSPLMPNDPYDRALARFWIKFGEDKGVAVWKMFHSNQDEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGS 151 (221)
Q Consensus 72 ~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~ 151 (221)
++||.+.. .++|+++.+.+.+++|++.....+.. ....++.+.++.+ |++|++++|++|+++|+
T Consensus 1 ~r~~~~~~---~~~~~~~~~~~~vd~~~d~~~~~l~~------------~~~~~~~~~l~~l-e~~L~~~~fl~Gd~~ti 64 (96)
T cd03200 1 ARFLYRLL---GPAPNAPNAATNIDSWVDTAIFQLAE------------GSSKEKAAVLRAL-NSALGRSPWLVGSEFTV 64 (96)
T ss_pred CchHHHHh---cccCCCchHHHHHHHHHHHHHHHHhc------------CCHHHHHHHHHHH-HHHHcCCCccCCCCCCH
Confidence 46888873 49999999999999999876533110 1235566788889 99999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhc
Q 027575 152 LEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKK 192 (221)
Q Consensus 152 aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 192 (221)
|||++++.+.+. +.. ...+|++.+|++++.+
T Consensus 65 ADi~l~~~l~~~-------~~~---~~~~p~l~~w~~r~~~ 95 (96)
T cd03200 65 ADIVSWCALLQT-------GLA---SAAPANVQRWLKSCEN 95 (96)
T ss_pred HHHHHHHHHHHc-------ccc---cccChHHHHHHHHHHh
Confidence 999999887643 211 3579999999999975
No 85
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.33 E-value=4.8e-12 Score=85.45 Aligned_cols=72 Identities=29% Similarity=0.522 Sum_probs=60.4
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCc
Q 027575 117 QDEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAP 194 (221)
Q Consensus 117 ~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p 194 (221)
+..+.....+.+.|+.+ |+.|++++|++|+++|+||+++++.+.++... +.... ..++|+|.+|++++.++|
T Consensus 24 ~~~~~~~~~~~~~l~~l-e~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~----~~~~~-~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 24 EMVEEARAKVPRYLEVL-EKRLKGGPYLVGDKLTIADIALFPMLDWLERL----GPDFL-FEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHH----TTTTT-HTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHHH-HHHHcCCCeeeccCCchhHHHHHHHHHHHHHh----CCCcc-cccCHHHHHHHHHHHcCC
Confidence 34567789999999999 99999999999999999999999999988543 43332 269999999999999987
No 86
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.31 E-value=1.1e-11 Score=86.84 Aligned_cols=102 Identities=16% Similarity=0.110 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHhhhh-hhhHH-hh----cCCc---hHHHHHHHHHHHHHHHHHhcccC-CCCeeecCCCchhHHHHHH
Q 027575 89 PYDRALARFWIKFGEDK-GVAVW-KM----FHSN---QDEESRMKEILEMLQTIEEHGIG-EKKIFHGDKIGSLEIAFGS 158 (221)
Q Consensus 89 ~~~~a~~~~~~~~~~~~-~~~~~-~~----~~~~---~~~~~~~~~~~~~l~~l~e~~L~-~~~~l~G~~~t~aD~~l~~ 158 (221)
|.+++++++|+.++++. .+... .. +... ...+.....+.+.++.+ |..|+ +++||+| ++|+||+++++
T Consensus 1 ~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-e~~l~~~~~~l~G-~fSiAD~~l~~ 78 (114)
T cd03195 1 PRQRARARQVQAWLRSDLLPIRVERSTEVVFAGAKAEPLSEAAQAAAEKLIAVA-EALLPPGAANLFG-EWCIADTDLAL 78 (114)
T ss_pred CHhhHHHHHHHHHHHhhHHHHHHhCCccceecCCCCCCCCHHHHHHHHHHHHHH-HHHHhcCCCcccC-CccHHHHHHHH
Confidence 35799999999999988 43221 11 2211 24456677888889999 88885 5589999 59999999999
Q ss_pred HHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcchhccCC
Q 027575 159 MLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLP 201 (221)
Q Consensus 159 ~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 201 (221)
++.|.... |.++ . |++.+|++++.+||+|++.++
T Consensus 79 ~~~~~~~~----g~~l----~-p~l~ay~~r~~~rPa~~~~~~ 112 (114)
T cd03195 79 MLNRLVLN----GDPV----P-ERLRDYARRQWQRPSVQAWLA 112 (114)
T ss_pred HHHHHHHc----CCCC----C-HHHHHHHHHHHCCHHHHHHHh
Confidence 99998543 5443 2 999999999999999999764
No 87
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.30 E-value=7.4e-12 Score=79.91 Aligned_cols=60 Identities=22% Similarity=0.258 Sum_probs=50.1
Q ss_pred CCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhh
Q 027575 10 LPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEM 78 (221)
Q Consensus 10 ~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~ 78 (221)
+.+++|.+++++|++.|+||+.+.... .+ ..+|. |+||+|++||.+|+||.+|+.||.++
T Consensus 15 ~~~~~~~kv~~~L~elglpye~~~~~~------~~--~~~P~-GkVP~L~~dg~vI~eS~aIl~yL~~~ 74 (74)
T cd03079 15 PDNASCLAVQTFLKMCNLPFNVRCRAN------AE--FMSPS-GKVPFIRVGNQIVSEFGPIVQFVEAK 74 (74)
T ss_pred CCCCCHHHHHHHHHHcCCCcEEEecCC------cc--ccCCC-CcccEEEECCEEEeCHHHHHHHHhcC
Confidence 567899999999999999999884321 11 16787 89999999999999999999999763
No 88
>PRK10638 glutaredoxin 3; Provisional
Probab=99.29 E-value=1.4e-11 Score=81.20 Aligned_cols=74 Identities=20% Similarity=0.229 Sum_probs=64.3
Q ss_pred CcceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHH
Q 027575 1 MAEVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIE 76 (221)
Q Consensus 1 M~~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~ 76 (221)
|++++||+.+.||||++++.+|..+|++|+.+.++.. ....+++.+.++. +++|++..||..|.+...+..+-.
T Consensus 1 m~~v~ly~~~~Cp~C~~a~~~L~~~gi~y~~~dv~~~-~~~~~~l~~~~g~-~~vP~i~~~g~~igG~~~~~~~~~ 74 (83)
T PRK10638 1 MANVEIYTKATCPFCHRAKALLNSKGVSFQEIPIDGD-AAKREEMIKRSGR-TTVPQIFIDAQHIGGCDDLYALDA 74 (83)
T ss_pred CCcEEEEECCCChhHHHHHHHHHHcCCCcEEEECCCC-HHHHHHHHHHhCC-CCcCEEEECCEEEeCHHHHHHHHH
Confidence 7889999999999999999999999999999988754 1245788899997 899999999999999877776643
No 89
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=99.26 E-value=2.5e-11 Score=79.24 Aligned_cols=71 Identities=21% Similarity=0.227 Sum_probs=62.2
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHH
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIE 76 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~ 76 (221)
.++||+.++||+|.+++.+|...|++|+.+.++-. ....++...++. .++|++..||..|.++..|.+||.
T Consensus 9 ~V~ly~~~~Cp~C~~ak~~L~~~gi~y~~idi~~~--~~~~~~~~~~g~-~~vP~i~i~g~~igG~~~l~~~l~ 79 (79)
T TIGR02190 9 SVVVFTKPGCPFCAKAKATLKEKGYDFEEIPLGND--ARGRSLRAVTGA-TTVPQVFIGGKLIGGSDELEAYLA 79 (79)
T ss_pred CEEEEECCCCHhHHHHHHHHHHcCCCcEEEECCCC--hHHHHHHHHHCC-CCcCeEEECCEEEcCHHHHHHHhC
Confidence 48999999999999999999999999999888654 344566677776 799999999999999999999984
No 90
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.23 E-value=3.9e-11 Score=83.04 Aligned_cols=75 Identities=23% Similarity=0.355 Sum_probs=60.6
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCC----------CeeecCCCchhHHHHHHHHHHHHHHHHHhccccc--CCCCCchHH
Q 027575 117 QDEESRMKEILEMLQTIEEHGIGEK----------KIFHGDKIGSLEIAFGSMLYWLQILEDIVGVKLF--DSHKFPGLH 184 (221)
Q Consensus 117 ~~~~~~~~~~~~~l~~l~e~~L~~~----------~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~--~~~~~p~l~ 184 (221)
+..++...++.+.++.| |..|+++ +|++|+++|+|||++++.+.++..+ +.+.. ....+|++.
T Consensus 25 ~~i~~~~~~l~~~l~~L-E~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~----~~~~~~~~~~~~P~l~ 99 (111)
T cd03204 25 EYLKKILDELEMVLDQV-EQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFL----GLSRRYWGNGKRPNLE 99 (111)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHc----CccccccccccChHHH
Confidence 44567889999999999 9999754 5999999999999999999888532 32211 025799999
Q ss_pred HHHHHHhcCcch
Q 027575 185 AWFENFKKAPVI 196 (221)
Q Consensus 185 ~~~~~~~~~p~~ 196 (221)
+|++++.+||+|
T Consensus 100 ~w~~rv~aRpsf 111 (111)
T cd03204 100 AYFERVLQRESF 111 (111)
T ss_pred HHHHHHHcCCCC
Confidence 999999999986
No 91
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.22 E-value=2e-11 Score=77.48 Aligned_cols=67 Identities=22% Similarity=0.493 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHH
Q 027575 118 DEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFEN 189 (221)
Q Consensus 118 ~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~ 189 (221)
..++...++.+.++.| |..|++++|+.|+++|+||+++++.+.++..... +.+. ...+|+|.+|++|
T Consensus 3 ~~~~~~~~~~~~l~~l-e~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~--~~~~--~~~~p~l~~w~~r 69 (69)
T PF13410_consen 3 AVERARAQLEAALDAL-EDHLADGPFLFGDRPSLADIALAPFLWRLRFVGP--DFDL--LEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTH--TCCH--HTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCc--CcCc--cccCHHHHHHHhC
Confidence 4567889999999999 9999999999999999999999999999865422 1122 4699999999986
No 92
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.21 E-value=5.1e-11 Score=81.32 Aligned_cols=71 Identities=17% Similarity=0.371 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcch
Q 027575 118 DEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVI 196 (221)
Q Consensus 118 ~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 196 (221)
..++...++.+.++.+ |+.|++++|++|+++|+||+++++++.+... . + .....+|++.+|++++.++|+|
T Consensus 30 ~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~---~-~---~~~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 30 DKETAIARAHRLLRLL-EEHLAGRDWLAGDRPTIADVAVYPYVALAPE---G-G---VDLEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred HHHHHHHHHHHHHHHH-HHHHccCCccCCCCCCHHHHHHHHHHHHHhc---c-C---CChhhCcHHHHHHHHHHhCcCC
Confidence 4456788999999999 9999999999999999999999988765421 1 2 2245899999999999999975
No 93
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.19 E-value=7.2e-11 Score=81.06 Aligned_cols=93 Identities=15% Similarity=0.263 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHhhhh-hhhHHh-----hc-C-Cc---hHHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHH
Q 027575 91 DRALARFWIKFGEDK-GVAVWK-----MF-H-SN---QDEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSM 159 (221)
Q Consensus 91 ~~a~~~~~~~~~~~~-~~~~~~-----~~-~-~~---~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~ 159 (221)
+++++++|+.+.++. .+.+.. .+ . .+ +..+....++.+.++.| |..|++++|+.|+++|+||+++++.
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~g~~~slaDi~~~~~ 80 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATLRFLRVYLGLGEADAEVLAFLRERGHAALAVL-EAHLAGRDFLVGDALTIADIALAAY 80 (105)
T ss_pred cHHHHHHHHHHhhcccCccceeeeeeEeeccCCCCCHHHHHHHHHHHHHHHHHH-HHHHccCccccCCCCCHHHHHHHHH
Confidence 588999999887666 433321 11 1 11 44567889999999999 9999988999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCCCchHHHHHHHHh
Q 027575 160 LYWLQILEDIVGVKLFDSHKFPGLHAWFENFK 191 (221)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~ 191 (221)
+.++... +.+ ...+|++.+|+++++
T Consensus 81 ~~~~~~~----~~~---~~~~p~l~~~~~~~~ 105 (105)
T cd03179 81 THVADEG----GFD---LADYPAIRAWLARIE 105 (105)
T ss_pred HHhcccc----CCC---hHhCccHHHHHHhhC
Confidence 9887421 322 357999999999874
No 94
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=99.14 E-value=2.7e-10 Score=72.95 Aligned_cols=71 Identities=18% Similarity=0.183 Sum_probs=60.7
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHH
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIE 76 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~ 76 (221)
+++||+.++||+|.+++-+|...|++|+.+.++.. .....+...+.. .++|++..||..+.++..|.+||+
T Consensus 2 ~v~lys~~~Cp~C~~ak~~L~~~~i~~~~~~v~~~--~~~~~~~~~~g~-~~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 2 SVSLFTKPGCPFCARAKAALQENGISYEEIPLGKD--ITGRSLRAVTGA-MTVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred eEEEEECCCCHHHHHHHHHHHHcCCCcEEEECCCC--hhHHHHHHHhCC-CCcCeEEECCEEEeCHHHHHHHhC
Confidence 48999999999999999999999999999988754 333455556665 689999999999999999999974
No 95
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.10 E-value=3.4e-10 Score=77.69 Aligned_cols=94 Identities=23% Similarity=0.233 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhcCC-------chHHHHHHHHHHHHHHHHHhcccCC--CCeeecCCCchhHHHHHHHHH
Q 027575 91 DRALARFWIKFGEDKGVAVWKMFHS-------NQDEESRMKEILEMLQTIEEHGIGE--KKIFHGDKIGSLEIAFGSMLY 161 (221)
Q Consensus 91 ~~a~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~l~e~~L~~--~~~l~G~~~t~aD~~l~~~l~ 161 (221)
+++++++++...++....+.+.+.. .+..+...+.+.+.++.| |+.|++ ++|++|+++|+||+++++.+.
T Consensus 2 e~~~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~l~~~~~~~~~G~~~s~aDi~l~~~~~ 80 (104)
T cd03192 2 EAARVDALVDTIADLRAEFAKYFYEKDGEEKKEKKKEFLKEAIPKYLKKL-EKILKENGGGYLVGDKLTWADLVVFDVLD 80 (104)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHhhHHHHHHH-HHHHHHcCCCeeeCCCccHHHHHHHHHHH
Confidence 4778888888877775555443332 144556678899999999 999976 899999999999999999998
Q ss_pred HHHHHHHHhcccccCCCCCchHHHHHHHH
Q 027575 162 WLQILEDIVGVKLFDSHKFPGLHAWFENF 190 (221)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~ 190 (221)
++... +... ....+|++++|++++
T Consensus 81 ~~~~~----~~~~-~~~~~p~l~~~~~~~ 104 (104)
T cd03192 81 YLLYL----DPKL-LLKKYPKLKALRERV 104 (104)
T ss_pred HHHhh----Cchh-hHHhChhHHHHHHhC
Confidence 88533 2211 135799999999875
No 96
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.10 E-value=9.9e-11 Score=79.76 Aligned_cols=95 Identities=25% Similarity=0.452 Sum_probs=61.9
Q ss_pred CHHHHHHHHHHHHHhhhh-hhhHHhhcCCchHHHHHHHHHHHHHHHHHhcccCCCC--eeecCCCchhHHHHHHHHHHHH
Q 027575 88 DPYDRALARFWIKFGEDK-GVAVWKMFHSNQDEESRMKEILEMLQTIEEHGIGEKK--IFHGDKIGSLEIAFGSMLYWLQ 164 (221)
Q Consensus 88 ~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l~e~~L~~~~--~l~G~~~t~aD~~l~~~l~~~~ 164 (221)
++..++.+.+|+.+.. . ..............+...+.+.+.+..| ++.|+++. |++|++||+||+++++.+..+.
T Consensus 2 ~~~~~a~i~~W~~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~ 79 (99)
T PF14497_consen 2 DPYWRALIDRWLDFSV-AFRRRKARLEKDEASGDFSREELPKALKIL-EKHLAERGGDFLVGDKPTLADIAVFGFLASLR 79 (99)
T ss_dssp --TTHHHHHHHHH-GH-CCHCCHCHHHHHCCHHHHHHHHHHHHHHHH-HHHHHHTSSSSSSSSS--HHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHhccc-hhhhHHHHHHHhhhhHHhhHHHHHHHHHHH-HHHHHcCCCeeecCCCCCHHHHHHHHHHHHHh
Confidence 4456777788887441 0 0000000011134566678899999999 99998666 9999999999999999886653
Q ss_pred HHHHHhcccccCCCCCchHHHHHHHHhc
Q 027575 165 ILEDIVGVKLFDSHKFPGLHAWFENFKK 192 (221)
Q Consensus 165 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 192 (221)
. . + + ...+|+|.+|++||++
T Consensus 80 ~-----~-~-~-~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 80 W-----A-D-F-PKDYPNLVRWYERIEE 99 (99)
T ss_dssp C-----C-H-H-TTTCHHHHHHHHHHHT
T ss_pred h-----c-c-c-ccccHHHHHHHHhhcC
Confidence 2 1 1 1 2589999999999974
No 97
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.08 E-value=1.2e-09 Score=76.46 Aligned_cols=71 Identities=14% Similarity=0.273 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHhccc---CCCCeeecCCCchhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcch
Q 027575 120 ESRMKEILEMLQTIEEHGI---GEKKIFHGDKIGSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVI 196 (221)
Q Consensus 120 ~~~~~~~~~~l~~l~e~~L---~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 196 (221)
+.....+.+.++.+ |..+ ++++|++|+ +|+||+++++++.+... . +.+ ..|++++|++++.++|++
T Consensus 40 ~~~~~~~~~~~~~l-e~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~---~-~~~-----~~P~l~~~~~rv~~rPsv 108 (114)
T cd03194 40 EAVQADIARIEAIW-AECLARFQGGPFLFGD-FSIADAFFAPVVTRFRT---Y-GLP-----LSPAAQAYVDALLAHPAM 108 (114)
T ss_pred HHHHHHHHHHHHHH-HHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHH---c-CCC-----CCHHHHHHHHHHHCCHHH
Confidence 34444455555555 5544 567899999 99999999999888742 1 322 129999999999999999
Q ss_pred hccCC
Q 027575 197 EENLP 201 (221)
Q Consensus 197 ~~~~~ 201 (221)
++++.
T Consensus 109 ~~~~~ 113 (114)
T cd03194 109 QEWIA 113 (114)
T ss_pred HHHHh
Confidence 98764
No 98
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.05 E-value=6.5e-10 Score=78.93 Aligned_cols=69 Identities=13% Similarity=0.219 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcC
Q 027575 119 EESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKA 193 (221)
Q Consensus 119 ~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~ 193 (221)
.+.....+.+.++.+ |++|++++|+.|+++|+||+++++.+.+.... .+.+. ...+|++++|++||.+.
T Consensus 56 ~~~~~~~~~~~l~~l-~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~---~~~~~--~~~~p~l~~W~~r~~~~ 124 (124)
T cd03202 56 REAALANFRAALEPL-RATLKGQPFLGGAAPNYADYIVFGGFQWARIV---SPFPL--LEEDDPVYDWFERCLDL 124 (124)
T ss_pred hHHHHHHHHHHHHHH-HHHHcCCCccCCCCCchhHHHHHHHHHHHHHc---Ccccc--cccCChHHHHHHHHhcC
Confidence 456778899999999 99999999999999999999999998888432 13232 35899999999999863
No 99
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.03 E-value=6.5e-09 Score=77.60 Aligned_cols=169 Identities=15% Similarity=0.226 Sum_probs=118.5
Q ss_pred CChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhhCCCCCCC-CCCH
Q 027575 11 PSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEMWPQSPLM-PNDP 89 (221)
Q Consensus 11 ~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~~~~~~l~-p~~~ 89 (221)
...-|..|.-.|.++++||..+..+- .+| ++|- |++|.|..|..++.|-..|..+.+.+. ..|. .-+.
T Consensus 33 d~ascLAVqtfLrMcnLPf~v~~~~N------aef--mSP~-G~vPllr~g~~~~aef~pIV~fVeak~--~~l~s~lsE 101 (257)
T KOG3027|consen 33 DNASCLAVQTFLRMCNLPFNVRQRAN------AEF--MSPG-GKVPLLRIGKTLFAEFEPIVDFVEAKG--VTLTSWLSE 101 (257)
T ss_pred cchhHHHHHHHHHHcCCCceeeecCC------ccc--cCCC-CCCceeeecchhhhhhhHHHHHHHHhc--cchhhhhhh
Confidence 34468999999999999998887542 343 6785 899999999999999999999999985 2232 1244
Q ss_pred HHHHHHHHHHHHhhhhhhhH--H-------------h-hcC--------------Cc--------------hHHHHHHHH
Q 027575 90 YDRALARFWIKFGEDKGVAV--W-------------K-MFH--------------SN--------------QDEESRMKE 125 (221)
Q Consensus 90 ~~~a~~~~~~~~~~~~~~~~--~-------------~-~~~--------------~~--------------~~~~~~~~~ 125 (221)
.+++.++..++.++..+... . . ..+ +. ...+...++
T Consensus 102 ~qkadmra~vslVen~~t~aEl~~s~~de~ty~~vT~~R~gs~ypWPLs~i~~f~Krr~~~r~lk~~~W~~~~~DqVie~ 181 (257)
T KOG3027|consen 102 DQKADMRAYVSLVENLLTTAELYVSWNDEETYDEVTALRYGSVYPWPLSHILPFVKRRKALRELKVYDWDDKTMDQVIEQ 181 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhccCCCCCCcHHHHHHHHHHHHHHHHHhhcCcccccHHHHHHH
Confidence 57888887777666441111 0 0 000 00 122556788
Q ss_pred HHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHHHHHHHH-HHhcccccCCCCCchHHHHHHHHhc
Q 027575 126 ILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLYWLQILE-DIVGVKLFDSHKFPGLHAWFENFKK 192 (221)
Q Consensus 126 ~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~-~~~~~~~~~~~~~p~l~~~~~~~~~ 192 (221)
....++.| ...|+.++||.|++||-+|..+++-+..+.... +....... ...|++|-++++|+.+
T Consensus 182 vdkc~~aL-sa~L~~q~yf~g~~P~elDAlvFGHlytilTt~Lpn~ela~~-lkkys~LlefcrrIeq 247 (257)
T KOG3027|consen 182 VDKCCRAL-SAQLGSQPYFTGDQPTELDALVFGHLYTILTTRLPNMELANI-LKKYSNLLEFCRRIEQ 247 (257)
T ss_pred HHHHHHHH-HHHhcCCCccCCCCccHHHHHHHhhhHHhhhhcCCcHHHHHH-HHHhHHHHHHHHHHHH
Confidence 88999999 999999999999999999999998666553320 00000001 3578899999988876
No 100
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=98.99 E-value=1.6e-09 Score=73.25 Aligned_cols=69 Identities=25% Similarity=0.524 Sum_probs=56.2
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHH
Q 027575 117 QDEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENF 190 (221)
Q Consensus 117 ~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~ 190 (221)
+..+...+++.+.++.| |++|++++|+.|+++|+||+++++.+.++.......+ . ...+|++.+|++++
T Consensus 32 ~~~~~~~~~~~~~~~~l-~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~~~~~--~--~~~~p~l~~~~~~~ 100 (100)
T cd00299 32 AALEEAREELAAALAAL-EKLLAGRPYLAGDRFSLADIALAPVLARLDLLGPLLG--L--LDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhhhhhh--h--hccCccHHHHHHhC
Confidence 45567788999999999 9999999999999999999999999999854322111 1 35799999999875
No 101
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=98.94 E-value=1.4e-09 Score=72.36 Aligned_cols=69 Identities=20% Similarity=0.265 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHHHHHHHHHHhcccc--cCCCCCchHHHHHHHHh
Q 027575 120 ESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLYWLQILEDIVGVKL--FDSHKFPGLHAWFENFK 191 (221)
Q Consensus 120 ~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~ 191 (221)
....+++.+.++.+ |+.|++++|+.|+++|+|||++++.+.++... .. +... .....+|++++|++++.
T Consensus 18 ~~~~~~~~~~l~~l-e~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~-~~-~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 18 REIYSLAKKDLKAL-SDLLGDKKFFFGDKPTSLDATVFGHLASILYA-PL-PNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHH-HHHhCCCCccCCCCCCHHHHHHHHHHHHHHhc-CC-CChHHHHHHHhCcHHHHHHHHhC
Confidence 35678899999999 99999999999999999999999998887421 00 1000 01247999999999873
No 102
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=98.92 E-value=4.4e-09 Score=67.37 Aligned_cols=59 Identities=24% Similarity=0.407 Sum_probs=50.6
Q ss_pred CCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhh
Q 027575 10 LPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEM 78 (221)
Q Consensus 10 ~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~ 78 (221)
..||+|.++.++|+.+|+||+.+.... + ..+|. |++|+|+++|..+.||..|++||.++
T Consensus 14 s~sp~clk~~~~Lr~~~~~~~v~~~~n------~---~~sp~-gkLP~l~~~~~~i~d~~~Ii~~L~~~ 72 (73)
T cd03078 14 SVDPECLAVLAYLKFAGAPLKVVPSNN------P---WRSPT-GKLPALLTSGTKISGPEKIIEYLRKQ 72 (73)
T ss_pred cCCHHHHHHHHHHHcCCCCEEEEecCC------C---CCCCC-CccCEEEECCEEecChHHHHHHHHHc
Confidence 467999999999999999998875431 1 26686 89999999999999999999999875
No 103
>PRK10329 glutaredoxin-like protein; Provisional
Probab=98.90 E-value=5e-09 Score=68.52 Aligned_cols=60 Identities=17% Similarity=0.287 Sum_probs=48.1
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCcccc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVC 66 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~ 66 (221)
++||+.++||+|.+++-+|..+||+|+.+.++-. ....+....++. .++|+++.+|..+.
T Consensus 3 v~lYt~~~Cp~C~~ak~~L~~~gI~~~~idi~~~--~~~~~~~~~~g~-~~vPvv~i~~~~~~ 62 (81)
T PRK10329 3 ITIYTRNDCVQCHATKRAMESRGFDFEMINVDRV--PEAAETLRAQGF-RQLPVVIAGDLSWS 62 (81)
T ss_pred EEEEeCCCCHhHHHHHHHHHHCCCceEEEECCCC--HHHHHHHHHcCC-CCcCEEEECCEEEe
Confidence 8999999999999999999999999999988753 212222344676 79999999886654
No 104
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=98.89 E-value=6.6e-09 Score=66.62 Aligned_cols=69 Identities=23% Similarity=0.263 Sum_probs=58.1
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHH
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILE 73 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~ 73 (221)
.++||+.+.||+|++++.+|..+||+|+.+.++-. ....+++.+.++. +++|++..||..|.+.....+
T Consensus 2 ~v~ly~~~~C~~C~ka~~~L~~~gi~~~~~di~~~-~~~~~el~~~~g~-~~vP~v~i~~~~iGg~~~~~~ 70 (73)
T cd03027 2 RVTIYSRLGCEDCTAVRLFLREKGLPYVEINIDIF-PERKAELEERTGS-SVVPQIFFNEKLVGGLTDLKS 70 (73)
T ss_pred EEEEEecCCChhHHHHHHHHHHCCCceEEEECCCC-HHHHHHHHHHhCC-CCcCEEEECCEEEeCHHHHHh
Confidence 47999999999999999999999999999988643 1345678888997 799999999998887666544
No 105
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=98.83 E-value=1.7e-08 Score=63.90 Aligned_cols=70 Identities=14% Similarity=0.119 Sum_probs=59.4
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHH
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEY 74 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~y 74 (221)
++++|+.++||+|++++.+|..+|++|+.+.++.. +...+++.+.++. .++|++..||..+.++..|.+.
T Consensus 1 ~v~ly~~~~Cp~C~~~~~~L~~~~i~~~~~di~~~-~~~~~~l~~~~~~-~~~P~~~~~~~~igg~~~~~~~ 70 (72)
T cd02066 1 KVVVFSKSTCPYCKRAKRLLESLGIEFEEIDILED-GELREELKELSGW-PTVPQIFINGEFIGGYDDLKAL 70 (72)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCcEEEEECCCC-HHHHHHHHHHhCC-CCcCEEEECCEEEecHHHHHHh
Confidence 37899999999999999999999999998877643 1245677788897 7999999999999999887764
No 106
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=98.80 E-value=1.6e-08 Score=64.38 Aligned_cols=63 Identities=29% Similarity=0.397 Sum_probs=53.0
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccc
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCD 67 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~e 67 (221)
++++|+.++||+|.+++.+|...|++|..+.++.. ....+++.+.+|. +++|++.++|..+.+
T Consensus 1 ~v~l~~~~~c~~c~~~~~~l~~~~i~~~~~~i~~~-~~~~~~~~~~~~~-~~vP~i~~~~~~i~g 63 (73)
T cd02976 1 EVTVYTKPDCPYCKATKRFLDERGIPFEEVDVDED-PEALEELKKLNGY-RSVPVVVIGDEHLSG 63 (73)
T ss_pred CEEEEeCCCChhHHHHHHHHHHCCCCeEEEeCCCC-HHHHHHHHHHcCC-cccCEEEECCEEEec
Confidence 47999999999999999999999999998888653 1335678888997 899999998876654
No 107
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.78 E-value=3.4e-07 Score=72.89 Aligned_cols=171 Identities=20% Similarity=0.261 Sum_probs=116.3
Q ss_pred CCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEe-CCccccchHHHHHHHHhhCCCCCCCCC-
Q 027575 10 LPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH-GEKPVCDSMVILEYIEEMWPQSPLMPN- 87 (221)
Q Consensus 10 ~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~-~~~~i~es~~I~~yL~~~~~~~~l~p~- 87 (221)
..++-|.++.+++..++-|.+.+..+. +| .+|. |++|+|+. +|..+.+-..|..+|.....+-.+=+.
T Consensus 15 tid~~sL~~l~y~kl~~~~l~v~~ssN------~~---~s~s-g~LP~l~~~ng~~va~~~~iv~~L~k~~~ky~~d~dl 84 (313)
T KOG3028|consen 15 TIDPDSLAALIYLKLAGAPLKVVVSSN------PW---RSPS-GKLPYLITDNGTKVAGPVKIVQFLKKNTKKYNLDADL 84 (313)
T ss_pred CcChhHHHHHHHHHHhCCCceeEeecC------CC---CCCC-CCCCeEEecCCceeccHHHHHHHHHHhcccCCcCccH
Confidence 356789999999999997776665543 22 5676 89999997 569999999999999884222122222
Q ss_pred CHHHHHHHHHHHHHhhhh-hhhHHh-hcCC------------------------------------------c-hHHHHH
Q 027575 88 DPYDRALARFWIKFGEDK-GVAVWK-MFHS------------------------------------------N-QDEESR 122 (221)
Q Consensus 88 ~~~~~a~~~~~~~~~~~~-~~~~~~-~~~~------------------------------------------~-~~~~~~ 122 (221)
...+++....|+.++... .+.+.. ++.. . +..++.
T Consensus 85 ~~kq~a~~~a~~sll~~~l~~a~~~t~~v~~~Ny~e~Tkk~yak~l~fP~n~~~p~~l~~qAk~rl~l~~g~~~~~e~~i 164 (313)
T KOG3028|consen 85 SAKQLADTLAFMSLLEENLEPALLYTFWVDTENYNEVTKKWYAKALPFPLNYILPGKLQRQAKERLQLTLGELTEREDQI 164 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHhHHHHHhcCCCchhhcchhhhHHHHHHHHHHHhCCchhhHHHH
Confidence 256677777777776655 332211 1100 0 112334
Q ss_pred HHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHHHH-HHHHHHhcccccCCCCCchHHHHHHHHhc
Q 027575 123 MKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLYWL-QILEDIVGVKLFDSHKFPGLHAWFENFKK 192 (221)
Q Consensus 123 ~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~-~~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 192 (221)
.....+++..| .+.|+.+.|+.|+++|-.|+.++..+..+ +...+..... .....++||.++++++.+
T Consensus 165 ~~~Aska~~~L-S~~Lgs~kffFgd~psslDa~lfs~la~~~~~~Lp~~~Lq-~~l~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 165 YKDASKALNLL-STLLGSKKFFFGDKPSSLDALLFSYLAILLQVALPNDSLQ-VHLLAHKNLVRYVERIRS 233 (313)
T ss_pred HHHHHHHHHHH-HHHhcCceEeeCCCCchHHHHHHHHHHHHHhccCCchhHH-HHHHhcchHHHHHHHHHH
Confidence 56678899999 99999999999999999999999988873 2211100000 012348999999999987
No 108
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=98.75 E-value=3.8e-08 Score=62.70 Aligned_cols=70 Identities=24% Similarity=0.261 Sum_probs=55.4
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccc--cchHHHHHHH
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPV--CDSMVILEYI 75 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i--~es~~I~~yL 75 (221)
++||+.++||+|++++..|...|++|..+.++.. ....+++.+.++. +.+|+++.+|..+ .+...|.++|
T Consensus 2 i~lf~~~~C~~C~~~~~~l~~~~i~~~~vdi~~~-~~~~~~~~~~~~~-~~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 2 VKVYTTPWCPPCKKAKEYLTSKGIAFEEIDVEKD-SAAREEVLKVLGQ-RGVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred EEEEcCCCChhHHHHHHHHHHCCCeEEEEeccCC-HHHHHHHHHHhCC-CcccEEEECCEEEeeCCHHHHHHHh
Confidence 7899999999999999999999999988877643 1224567778887 7999999988776 4555565554
No 109
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=98.72 E-value=5.5e-08 Score=62.51 Aligned_cols=73 Identities=15% Similarity=0.206 Sum_probs=57.2
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHH
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIE 76 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~ 76 (221)
+++||+.+.||+|.+++-+|...|++|+.+.++.. ....+++.+......++|++..||..+.+...+.++-.
T Consensus 1 ~i~ly~~~~Cp~C~~ak~~L~~~~i~~~~i~i~~~-~~~~~~~~~~~~~~~~vP~v~i~g~~igg~~~~~~~~~ 73 (75)
T cd03418 1 KVEIYTKPNCPYCVRAKALLDKKGVDYEEIDVDGD-PALREEMINRSGGRRTVPQIFIGDVHIGGCDDLYALER 73 (75)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCcEEEEECCCC-HHHHHHHHHHhCCCCccCEEEECCEEEeChHHHHHHHh
Confidence 37899999999999999999999999999888753 12234454444431289999999999999888877643
No 110
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=98.72 E-value=6e-08 Score=63.23 Aligned_cols=72 Identities=19% Similarity=0.228 Sum_probs=55.8
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHH-hhCCCCCcccEEEeCCccccchHHHHHHH
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLL-KYNPVHKKIPVLVHGEKPVCDSMVILEYI 75 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~-~~~p~~g~vP~L~~~~~~i~es~~I~~yL 75 (221)
++++|+.++||||.++.=+|..+|++|+.+.++........++. ..++. .++|++..||..+......-++.
T Consensus 2 ~v~iyt~~~CPyC~~ak~~L~~~g~~~~~i~~~~~~~~~~~~~~~~~~g~-~tvP~I~i~~~~igg~~d~~~~~ 74 (80)
T COG0695 2 NVTIYTKPGCPYCKRAKRLLDRKGVDYEEIDVDDDEPEEAREMVKRGKGQ-RTVPQIFIGGKHVGGCDDLDALE 74 (80)
T ss_pred CEEEEECCCCchHHHHHHHHHHcCCCcEEEEecCCcHHHHHHHHHHhCCC-CCcCEEEECCEEEeCcccHHHHH
Confidence 38999999999999999999999999999999876211333444 45576 79999999998777655554443
No 111
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.71 E-value=1.2e-07 Score=68.47 Aligned_cols=112 Identities=13% Similarity=0.193 Sum_probs=68.3
Q ss_pred CccccchHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHhhhh-hhhHHhhcCCc-----hHHHHHHHHHHHHHHHHHh
Q 027575 62 EKPVCDSMVILEYIEEMWPQSPLMPNDPYDRALARFWIKFGEDK-GVAVWKMFHSN-----QDEESRMKEILEMLQTIEE 135 (221)
Q Consensus 62 ~~~i~es~~I~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~l~~l~e 135 (221)
-....|+..--+|+..... + + ..++ ....++... +-.+...+..+ +.++.....+.+..+.+
T Consensus 28 yrt~~ea~~~f~yi~~~~~---f-~--~~er----~~~~~~Ga~aM~~isk~lkk~~~i~~D~r~~L~~a~~~w~~~~-- 95 (149)
T cd03197 28 YRTWSEALASFDYITPSGY---F-G--YWEK----FFAKYVGAAAMYLISKYLKKPRLLQDDVREWLYDALNTWVAAL-- 95 (149)
T ss_pred hCCHHHHHHhhhhHhcCCC---c-c--HHHH----HHHHHhhHHHHHHHHHHhccccCCCchHHHHHHHHHHHHHHHh--
Confidence 3556788888888876532 2 1 1122 222222222 22222333322 34555556666655555
Q ss_pred cccCCCCeeecCCCchhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhc
Q 027575 136 HGIGEKKIFHGDKIGSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKK 192 (221)
Q Consensus 136 ~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 192 (221)
.++++|++|+++|+||+++++.+..+..+. +.+ +...+|++.+|+++|.+
T Consensus 96 --~~~~~FlaGd~ptIADisvyg~l~s~e~~~---~~~--Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 96 --GKDRQFHGGSKPNLADLAVYGVLRSVEGHP---AFK--DMVEETKIGEWYERMDA 145 (149)
T ss_pred --cCCCCccCCCCCCHHHHHHHHHHHHHHHhc---ccc--chhhCcCHHHHHHHHHH
Confidence 556789999999999999999887774321 321 24589999999999986
No 112
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.68 E-value=5.7e-08 Score=69.11 Aligned_cols=72 Identities=15% Similarity=0.206 Sum_probs=55.1
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHHHHHHH-HHHhcccccCCCCCchHHHHHHHH
Q 027575 117 QDEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLYWLQIL-EDIVGVKLFDSHKFPGLHAWFENF 190 (221)
Q Consensus 117 ~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~-~~~~~~~~~~~~~~p~l~~~~~~~ 190 (221)
...++....+.+.++.| +..|++++||.|+++|.+|+++++.+.++... .+....... ...+|||.+|++||
T Consensus 53 ~~~ee~~~~~~~~l~aL-s~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~-~~~~pnL~~y~~Ri 125 (126)
T cd03211 53 KTLDQVIEEVDQCCQAL-SQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEK-VKKYSNLLAFCRRI 125 (126)
T ss_pred CCHHHHHHHHHHHHHHH-HHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHH-HHhCcHHHHHHHhc
Confidence 34567788899999999 99999999999999999999999988777421 000011111 45899999999997
No 113
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.67 E-value=7.6e-08 Score=65.28 Aligned_cols=66 Identities=21% Similarity=0.358 Sum_probs=52.7
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHH
Q 027575 117 QDEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENF 190 (221)
Q Consensus 117 ~~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~ 190 (221)
+..+....++.+.++.+ |++|++++| +++|+|||++++.+.+..... .+.+. ...+|+|++|+++|
T Consensus 33 ~~~~~~~~~~~~~l~~l-e~~L~~~~~---d~~TlADi~l~~~l~~~~~~~--~~~~~--~~~~p~l~~w~~rm 98 (98)
T cd03205 33 PWLERQRGKIERALDAL-EAELAKLPL---DPLDLADIAVACALGYLDFRH--PDLDW--RAAHPALAAWYARF 98 (98)
T ss_pred HHHHHHHHHHHHHHHHH-HHhhhhCCC---CCCCHHHHHHHHHHHHHHhHc--cCcch--hhhChHHHHHHHhC
Confidence 45567789999999999 999998888 889999999999999884321 12211 35899999999985
No 114
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=98.66 E-value=1.8e-07 Score=63.75 Aligned_cols=103 Identities=17% Similarity=0.164 Sum_probs=70.7
Q ss_pred CHHHHHHHHHHHHHhhhhhhhHHh------hcCC-c--hHHHHHHHHHHHHHHHHHhcccC-CCCeeecCCCchhHHHHH
Q 027575 88 DPYDRALARFWIKFGEDKGVAVWK------MFHS-N--QDEESRMKEILEMLQTIEEHGIG-EKKIFHGDKIGSLEIAFG 157 (221)
Q Consensus 88 ~~~~~a~~~~~~~~~~~~~~~~~~------~~~~-~--~~~~~~~~~~~~~l~~l~e~~L~-~~~~l~G~~~t~aD~~l~ 157 (221)
|..+|++.+++..++.+.+.+++. .|.. + .-.+.....+.+.+... +..|. +++||.|+ .|+||..++
T Consensus 1 D~~~RArAR~vqAwlrSdf~~lR~Erpt~vvf~~~~~~pLs~~a~~~a~kL~~~a-~~ll~~g~~~LFGe-wsIAD~dlA 78 (117)
T PF14834_consen 1 DRQERARARQVQAWLRSDFMALRQERPTNVVFRGARKPPLSEAAQAAAQKLIAVA-ERLLADGGPNLFGE-WSIADADLA 78 (117)
T ss_dssp SHHHHHHHHHHHHHHHHS-HHHHHHS-THHHHS--------HHHHHHHHHHHHHH-HHHTTT--SSTTSS---HHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcccHHHHhhCChhhhhcCCCCCCCCHHHHHHHHHHHHHH-HHHhccCCCCcccc-chHHHHHHH
Confidence 467899999999999888666653 2222 2 33455666777777778 77786 56899997 999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcchhccCC
Q 027575 158 SMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIEENLP 201 (221)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 201 (221)
++++++... |.+ + -+.+..|.++.-++|++++++.
T Consensus 79 ~ml~Rl~~~----gd~-v----P~~l~~Ya~~qwqrpsVQ~Wla 113 (117)
T PF14834_consen 79 LMLNRLVTY----GDP-V----PERLADYAERQWQRPSVQRWLA 113 (117)
T ss_dssp HHHHHHHTT----T---------HHHHHHHHHHHT-HHHHHHHH
T ss_pred HHHHHHHHc----CCC-C----CHHHHHHHHHHHCCHHHHHHHH
Confidence 999999432 322 2 2699999999999999998764
No 115
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=98.63 E-value=1.5e-07 Score=61.23 Aligned_cols=72 Identities=18% Similarity=0.186 Sum_probs=59.1
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHh
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEE 77 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~ 77 (221)
+++|+.+.||+|.+++-+|...|++|+.+.++.. ....+++.+.... ..+|++..||..+.+...+.++-++
T Consensus 1 v~ly~~~~Cp~C~~a~~~L~~~~i~~~~~di~~~-~~~~~~~~~~~g~-~~vP~i~i~g~~igg~~~~~~~~~~ 72 (79)
T TIGR02181 1 VTIYTKPYCPYCTRAKALLSSKGVTFTEIRVDGD-PALRDEMMQRSGR-RTVPQIFIGDVHVGGCDDLYALDRE 72 (79)
T ss_pred CEEEecCCChhHHHHHHHHHHcCCCcEEEEecCC-HHHHHHHHHHhCC-CCcCEEEECCEEEcChHHHHHHHHc
Confidence 5799999999999999999999999999988754 1234556666665 6899999999999988888776654
No 116
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=98.62 E-value=2.2e-07 Score=61.31 Aligned_cols=78 Identities=17% Similarity=0.182 Sum_probs=61.4
Q ss_pred CcceEEeccCCChhHHHHHHHHHh-----hCCCceEEEccccCccCchHHHhhCCC-CCcccEEEeCCccccchHHHHHH
Q 027575 1 MAEVKLLGTLPSPFVYRVIWALKL-----KGVPFEFVEEDVFSNEKSALLLKYNPV-HKKIPVLVHGEKPVCDSMVILEY 74 (221)
Q Consensus 1 M~~~~Ly~~~~sp~~~~~~~~l~~-----~gi~~~~~~v~~~~~~~~~~~~~~~p~-~g~vP~L~~~~~~i~es~~I~~y 74 (221)
|. +++|+.++||+|.+++-+|.. .|++|+.+.++-.. ...+++...... ..++|++..||..+.+...|.++
T Consensus 1 m~-v~iy~~~~C~~C~~a~~~L~~l~~~~~~i~~~~idi~~~~-~~~~el~~~~~~~~~~vP~ifi~g~~igg~~~~~~~ 78 (85)
T PRK11200 1 MF-VVIFGRPGCPYCVRAKELAEKLSEERDDFDYRYVDIHAEG-ISKADLEKTVGKPVETVPQIFVDQKHIGGCTDFEAY 78 (85)
T ss_pred CE-EEEEeCCCChhHHHHHHHHHhhcccccCCcEEEEECCCCh-HHHHHHHHHHCCCCCcCCEEEECCEEEcCHHHHHHH
Confidence 54 999999999999999999999 89999998887531 112344433221 13799999999999999999999
Q ss_pred HHhhCC
Q 027575 75 IEEMWP 80 (221)
Q Consensus 75 L~~~~~ 80 (221)
+.+.++
T Consensus 79 ~~~~~~ 84 (85)
T PRK11200 79 VKENLG 84 (85)
T ss_pred HHHhcc
Confidence 988754
No 117
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=98.60 E-value=1.5e-07 Score=60.08 Aligned_cols=57 Identities=18% Similarity=0.201 Sum_probs=44.8
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEK 63 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~ 63 (221)
++||+.+.||+|++++-+|..+|++|+.+.++-. ....+.....+. ..||+++.+|.
T Consensus 1 v~ly~~~~Cp~C~~ak~~L~~~~i~~~~~di~~~--~~~~~~~~~~g~-~~vP~v~~~g~ 57 (72)
T TIGR02194 1 ITVYSKNNCVQCKMTKKALEEHGIAFEEINIDEQ--PEAIDYVKAQGF-RQVPVIVADGD 57 (72)
T ss_pred CEEEeCCCCHHHHHHHHHHHHCCCceEEEECCCC--HHHHHHHHHcCC-cccCEEEECCC
Confidence 5899999999999999999999999999988753 222233333465 58999999664
No 118
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.58 E-value=1.5e-07 Score=67.90 Aligned_cols=73 Identities=19% Similarity=0.198 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHHHHHHH-HHHhcccccCCCCCchHHHHHHHHhc
Q 027575 118 DEESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLYWLQIL-EDIVGVKLFDSHKFPGLHAWFENFKK 192 (221)
Q Consensus 118 ~~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~-~~~~~~~~~~~~~~p~l~~~~~~~~~ 192 (221)
..++...++.+.++.| ++.|++++|+.|+++|.+|+++++.+..+... .+....... ...+|+|.+|++|+.+
T Consensus 61 ~~~~~~~~a~~~l~~l-~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~-~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 61 VEAEIYRDAKECLNLL-SQRLGESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNH-LKQCPNLCRFCDRILS 134 (137)
T ss_pred hHHHHHHHHHHHHHHH-HHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHH-HHHCcHHHHHHHHHHH
Confidence 4566778889999999 99999999999999999999999987766321 000000011 3579999999999975
No 119
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=98.57 E-value=3.1e-07 Score=62.43 Aligned_cols=72 Identities=17% Similarity=0.079 Sum_probs=57.5
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCCceEEEccccC--ccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHH
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFS--NEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYI 75 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~--~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL 75 (221)
++++|+.++||||.+++-+|...|++|+.+.++-.. ....+.+.+.+.. .++|.+..||..|.+...+....
T Consensus 9 ~Vvvysk~~Cp~C~~ak~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~tg~-~tvP~Vfi~g~~iGG~ddl~~l~ 82 (99)
T TIGR02189 9 AVVIFSRSSCCMCHVVKRLLLTLGVNPAVHEIDKEPAGKDIENALSRLGCS-PAVPAVFVGGKLVGGLENVMALH 82 (99)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCCCEEEEcCCCccHHHHHHHHHHhcCC-CCcCeEEECCEEEcCHHHHHHHH
Confidence 589999999999999999999999999999887541 1112345555665 69999999999998887777644
No 120
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=98.56 E-value=3.5e-07 Score=58.86 Aligned_cols=72 Identities=11% Similarity=0.206 Sum_probs=54.0
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhC-CCCCcccEEEe-CCccccch--HHHHHHHH
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYN-PVHKKIPVLVH-GEKPVCDS--MVILEYIE 76 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~-p~~g~vP~L~~-~~~~i~es--~~I~~yL~ 76 (221)
+++||+.++||+|++++-.|...|++|+.+.++-. +...+.+.+.| +. +.+|+++. ||..+.+. ..+.++|.
T Consensus 1 ~v~ly~~~~C~~C~~~~~~L~~~~~~~~~idi~~~-~~~~~~~~~~~~~~-~~vP~i~~~~g~~l~~~~~~~~~~~l~ 76 (77)
T TIGR02200 1 TITVYGTTWCGYCAQLMRTLDKLGAAYEWVDIEED-EGAADRVVSVNNGN-MTVPTVKFADGSFLTNPSAAQVKAKLQ 76 (77)
T ss_pred CEEEEECCCChhHHHHHHHHHHcCCceEEEeCcCC-HhHHHHHHHHhCCC-ceeCEEEECCCeEecCCCHHHHHHHhh
Confidence 47999999999999999999999999988776543 22345666776 76 79999975 66666553 34555553
No 121
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=98.51 E-value=2.1e-07 Score=57.17 Aligned_cols=60 Identities=23% Similarity=0.298 Sum_probs=49.2
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPV 65 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i 65 (221)
+++|+.++||+|.+++-+|...|++|+.+.++.. +...+++.+.... .++|++..||..|
T Consensus 1 V~vy~~~~C~~C~~~~~~L~~~~i~y~~~dv~~~-~~~~~~l~~~~g~-~~~P~v~i~g~~I 60 (60)
T PF00462_consen 1 VVVYTKPGCPYCKKAKEFLDEKGIPYEEVDVDED-EEAREELKELSGV-RTVPQVFIDGKFI 60 (60)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTBEEEEEEGGGS-HHHHHHHHHHHSS-SSSSEEEETTEEE
T ss_pred cEEEEcCCCcCHHHHHHHHHHcCCeeeEcccccc-hhHHHHHHHHcCC-CccCEEEECCEEC
Confidence 5799999999999999999999999999998764 1235566666554 6899999988754
No 122
>PHA03050 glutaredoxin; Provisional
Probab=98.45 E-value=8.1e-07 Score=61.27 Aligned_cols=70 Identities=19% Similarity=0.315 Sum_probs=57.4
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCC---CceEEEccccC--ccCchHHHhhCCCCCcccEEEeCCccccchHHHHH
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGV---PFEFVEEDVFS--NEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILE 73 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi---~~~~~~v~~~~--~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~ 73 (221)
++++|+.++||||.+++-+|...|+ +|+.+.++-.. ....+++.+.+.. .+||.+.+||..|.+...+..
T Consensus 14 ~V~vys~~~CPyC~~ak~~L~~~~i~~~~~~~i~i~~~~~~~~~~~~l~~~tG~-~tVP~IfI~g~~iGG~ddl~~ 88 (108)
T PHA03050 14 KVTIFVKFTCPFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGG-RTVPRIFFGKTSIGGYSDLLE 88 (108)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCCcCCcEEEECCCCCCCHHHHHHHHHHcCC-CCcCEEEECCEEEeChHHHHH
Confidence 6899999999999999999999999 78888887421 1224667777775 699999999999988877766
No 123
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=98.43 E-value=1.4e-06 Score=57.62 Aligned_cols=76 Identities=17% Similarity=0.189 Sum_probs=57.3
Q ss_pred eEEeccCCChhHHHHHHHHHhhC-----CCceEEEccccCccCchHHHhhCCC-CCcccEEEeCCccccchHHHHHHHHh
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKG-----VPFEFVEEDVFSNEKSALLLKYNPV-HKKIPVLVHGEKPVCDSMVILEYIEE 77 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~g-----i~~~~~~v~~~~~~~~~~~~~~~p~-~g~vP~L~~~~~~i~es~~I~~yL~~ 77 (221)
+++|+.++||||.+++-+|...+ ++|+.+.++... ...+++....-. ..+||++..||..+.++..|.+++.+
T Consensus 2 V~vys~~~Cp~C~~ak~~L~~~~~~~~~i~~~~idi~~~~-~~~~~l~~~~g~~~~tVP~ifi~g~~igG~~dl~~~~~~ 80 (86)
T TIGR02183 2 VVIFGRPGCPYCVRAKQLAEKLAIERADFEFRYIDIHAEG-ISKADLEKTVGKPVETVPQIFVDEKHVGGCTDFEQLVKE 80 (86)
T ss_pred EEEEeCCCCccHHHHHHHHHHhCcccCCCcEEEEECCCCH-HHHHHHHHHhCCCCCCcCeEEECCEEecCHHHHHHHHHh
Confidence 68999999999999999999985 567777665321 113344433321 14799999999999999999999988
Q ss_pred hCC
Q 027575 78 MWP 80 (221)
Q Consensus 78 ~~~ 80 (221)
.+.
T Consensus 81 ~~~ 83 (86)
T TIGR02183 81 NFD 83 (86)
T ss_pred ccc
Confidence 653
No 124
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=98.43 E-value=1.8e-06 Score=56.26 Aligned_cols=74 Identities=20% Similarity=0.208 Sum_probs=60.1
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCc--cCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHh
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSN--EKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEE 77 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~--~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~ 77 (221)
++++|+.++||+|.+++-+|...+++|+.+.++.... .....+.+.+.. .++|++..+|..+.++..|.++..+
T Consensus 1 ~v~~y~~~~Cp~C~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~-~~~P~v~~~g~~igg~~~~~~~~~~ 76 (82)
T cd03419 1 PVVVFSKSYCPYCKRAKSLLKELGVKPAVVELDQHEDGSEIQDYLQELTGQ-RTVPNVFIGGKFIGGCDDLMALHKS 76 (82)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCCcEEEEEeCCCChHHHHHHHHHHhCC-CCCCeEEECCEEEcCHHHHHHHHHc
Confidence 3789999999999999999999999999998886521 112345566665 5899999999999999999888765
No 125
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=98.25 E-value=4.8e-06 Score=54.44 Aligned_cols=73 Identities=19% Similarity=0.216 Sum_probs=57.2
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCC--ceEEEccccC--ccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHh
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVP--FEFVEEDVFS--NEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEE 77 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~--~~~~~v~~~~--~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~ 77 (221)
+++|+.++||+|.+++-+|...+++ |+...++... +...+.+.+.... .++|++..||..+.++..+.++..+
T Consensus 1 V~~f~~~~Cp~C~~~~~~L~~~~i~~~~~~~~v~~~~~~~~~~~~l~~~~g~-~~vP~v~i~g~~igg~~~~~~~~~~ 77 (84)
T TIGR02180 1 VVVFSKSYCPYCKKAKEILAKLNVKPAYEVVELDQLSNGSEIQDYLEEITGQ-RTVPNIFINGKFIGGCSDLLALYKS 77 (84)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCCCCCEEEEeeCCCChHHHHHHHHHHhCC-CCCCeEEECCEEEcCHHHHHHHHHc
Confidence 4789999999999999999999999 8888887641 1112234555555 5899999999999999888887654
No 126
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=98.20 E-value=7.3e-06 Score=55.44 Aligned_cols=72 Identities=26% Similarity=0.246 Sum_probs=55.9
Q ss_pred ceEEecc-----CCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHH
Q 027575 3 EVKLLGT-----LPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIE 76 (221)
Q Consensus 3 ~~~Ly~~-----~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~ 76 (221)
++.+|.. ++||||.+++-+|...|++|+.+.++-. .....++.+.+.. .++|.+..||..|.+...+.+...
T Consensus 13 ~Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~di~~~-~~~~~~l~~~tg~-~tvP~vfi~g~~iGG~ddl~~l~~ 89 (97)
T TIGR00365 13 PVVLYMKGTPQFPQCGFSARAVQILKACGVPFAYVNVLED-PEIRQGIKEYSNW-PTIPQLYVKGEFVGGCDIIMEMYQ 89 (97)
T ss_pred CEEEEEccCCCCCCCchHHHHHHHHHHcCCCEEEEECCCC-HHHHHHHHHHhCC-CCCCEEEECCEEEeChHHHHHHHH
Confidence 4778854 8899999999999999999998877532 1234455566665 689999999999888877776543
No 127
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=98.13 E-value=1.3e-05 Score=53.41 Aligned_cols=71 Identities=21% Similarity=0.140 Sum_probs=56.5
Q ss_pred ceEEecc-----CCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHH
Q 027575 3 EVKLLGT-----LPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYI 75 (221)
Q Consensus 3 ~~~Ly~~-----~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL 75 (221)
++++|.. ++||||.+++-+|...|++|+.+.++.. .....++.+.+.. .++|++..||..|.+...+.+..
T Consensus 9 ~vvvf~k~~~~~~~Cp~C~~ak~~L~~~~i~y~~idv~~~-~~~~~~l~~~~g~-~tvP~vfi~g~~iGG~~~l~~l~ 84 (90)
T cd03028 9 PVVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTFDILED-EEVRQGLKEYSNW-PTFPQLYVNGELVGGCDIVKEMH 84 (90)
T ss_pred CEEEEEcCCCCCCCCcHHHHHHHHHHHcCCCeEEEEcCCC-HHHHHHHHHHhCC-CCCCEEEECCEEEeCHHHHHHHH
Confidence 4678855 6999999999999999999999988643 2234556666665 68999999999999888887754
No 128
>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional
Probab=97.99 E-value=2.6e-05 Score=66.42 Aligned_cols=70 Identities=17% Similarity=0.253 Sum_probs=54.7
Q ss_pred CcceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHH-hh--------CCCCCcccEEEeCCccccchHHH
Q 027575 1 MAEVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLL-KY--------NPVHKKIPVLVHGEKPVCDSMVI 71 (221)
Q Consensus 1 M~~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~-~~--------~p~~g~vP~L~~~~~~i~es~~I 71 (221)
|..+++|+.++||+|.++.-+|...||+|+.+.++-. ....++. +. ... .+||++..||..|.+-..+
T Consensus 1 m~~V~vys~~~Cp~C~~aK~~L~~~gi~~~~idi~~~--~~~~~~~~~~~~~~~~~~~g~-~tvP~ifi~~~~igGf~~l 77 (410)
T PRK12759 1 MVEVRIYTKTNCPFCDLAKSWFGANDIPFTQISLDDD--VKRAEFYAEVNKNILLVEEHI-RTVPQIFVGDVHIGGYDNL 77 (410)
T ss_pred CCcEEEEeCCCCHHHHHHHHHHHHCCCCeEEEECCCC--hhHHHHHHHHhhccccccCCC-CccCeEEECCEEEeCchHH
Confidence 7789999999999999999999999999999998733 2222322 22 343 5899999999888887666
Q ss_pred HH
Q 027575 72 LE 73 (221)
Q Consensus 72 ~~ 73 (221)
..
T Consensus 78 ~~ 79 (410)
T PRK12759 78 MA 79 (410)
T ss_pred HH
Confidence 55
No 129
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=97.93 E-value=4.7e-05 Score=48.39 Aligned_cols=55 Identities=31% Similarity=0.492 Sum_probs=48.2
Q ss_pred CChhHHHHHHHHHhhCCC---ceEEEccccCccCchHHHhhCCCCCcccEEEe-CCccccchHHHHHHH
Q 027575 11 PSPFVYRVIWALKLKGVP---FEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH-GEKPVCDSMVILEYI 75 (221)
Q Consensus 11 ~sp~~~~~~~~l~~~gi~---~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~-~~~~i~es~~I~~yL 75 (221)
.+|-|..+.++|...+.| |+.+...- ++ .+|. |++|+|.+ ++..+.+-..|++||
T Consensus 13 id~ecLa~~~yl~~~~~~~~~~~vv~s~n------~~---~Spt-g~LP~L~~~~~~~vsg~~~Iv~yL 71 (72)
T PF10568_consen 13 IDPECLAVIAYLKFAGAPEQQFKVVPSNN------PW---LSPT-GELPALIDSGGTWVSGFRNIVEYL 71 (72)
T ss_pred cCHHHHHHHHHHHhCCCCCceEEEEEcCC------CC---cCCC-CCCCEEEECCCcEEECHHHHHHhh
Confidence 678999999999999999 77777642 22 7887 89999999 999999999999998
No 130
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=97.71 E-value=0.00017 Score=52.47 Aligned_cols=71 Identities=14% Similarity=-0.019 Sum_probs=55.7
Q ss_pred eEEeccC------CChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCC---CCcccEEEeCCccccchHHHHHH
Q 027575 4 VKLLGTL------PSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPV---HKKIPVLVHGEKPVCDSMVILEY 74 (221)
Q Consensus 4 ~~Ly~~~------~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~---~g~vP~L~~~~~~i~es~~I~~y 74 (221)
++||+.+ ++|+|.+++-+|...||+|+.+.++.. ....+++.+.... ..++|.+..+|..|.+...+.+.
T Consensus 2 VvlYttsl~giR~t~~~C~~ak~iL~~~~V~~~e~DVs~~-~~~~~EL~~~~g~~~~~~tvPqVFI~G~~IGG~del~~L 80 (147)
T cd03031 2 VVLYTTSLRGVRKTFEDCNNVRAILESFRVKFDERDVSMD-SGFREELRELLGAELKAVSLPRVFVDGRYLGGAEEVLRL 80 (147)
T ss_pred EEEEEcCCcCCCCcChhHHHHHHHHHHCCCcEEEEECCCC-HHHHHHHHHHhCCCCCCCCCCEEEECCEEEecHHHHHHH
Confidence 6899998 999999999999999999999988754 1234555554321 14899999999999888877774
Q ss_pred H
Q 027575 75 I 75 (221)
Q Consensus 75 L 75 (221)
-
T Consensus 81 ~ 81 (147)
T cd03031 81 N 81 (147)
T ss_pred H
Confidence 3
No 131
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=97.70 E-value=0.00021 Score=48.66 Aligned_cols=73 Identities=21% Similarity=0.195 Sum_probs=58.3
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCCceEEEccccC--ccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHH
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFS--NEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIE 76 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~--~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~ 76 (221)
++.+|+-++||||.+++-+|...|+++..+++|-.. ......+.+..-. .++|.+..+|+.|.++..+..+=.
T Consensus 15 ~VVifSKs~C~~c~~~k~ll~~~~v~~~vvELD~~~~g~eiq~~l~~~tg~-~tvP~vFI~Gk~iGG~~dl~~lh~ 89 (104)
T KOG1752|consen 15 PVVIFSKSSCPYCHRAKELLSDLGVNPKVVELDEDEDGSEIQKALKKLTGQ-RTVPNVFIGGKFIGGASDLMALHK 89 (104)
T ss_pred CEEEEECCcCchHHHHHHHHHhCCCCCEEEEccCCCCcHHHHHHHHHhcCC-CCCCEEEECCEEEcCHHHHHHHHH
Confidence 578999999999999999999999999999998762 2222334445554 589999999999998888877643
No 132
>PRK10824 glutaredoxin-4; Provisional
Probab=97.65 E-value=0.00024 Score=49.35 Aligned_cols=71 Identities=21% Similarity=0.186 Sum_probs=55.9
Q ss_pred ceEEecc-----CCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHH
Q 027575 3 EVKLLGT-----LPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYI 75 (221)
Q Consensus 3 ~~~Ly~~-----~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL 75 (221)
++.+|.- ++||||.++.-+|...|++|..+.++-. ......+.+.+-. .+||-+..||..|.++..+....
T Consensus 16 ~Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~d-~~~~~~l~~~sg~-~TVPQIFI~G~~IGG~ddl~~l~ 91 (115)
T PRK10824 16 PILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQN-PDIRAELPKYANW-PTFPQLWVDGELVGGCDIVIEMY 91 (115)
T ss_pred CEEEEECCCCCCCCCchHHHHHHHHHHcCCCceEEEecCC-HHHHHHHHHHhCC-CCCCeEEECCEEEcChHHHHHHH
Confidence 4677765 5999999999999999999998877543 1234556666665 69999999999999988777754
No 133
>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri
Probab=97.26 E-value=0.001 Score=41.36 Aligned_cols=58 Identities=16% Similarity=0.202 Sum_probs=40.0
Q ss_pred ceEEeccCCChhHHHHHHHHHhh-----CCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCcccc
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLK-----GVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVC 66 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~-----gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~ 66 (221)
++++|+.++||+|.++.-+|... ++++..+.++ . .+++.+.... ..+|++..||..++
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~id~~----~-~~~l~~~~~i-~~vPti~i~~~~~~ 64 (67)
T cd02973 2 NIEVFVSPTCPYCPDAVQAANRIAALNPNISAEMIDAA----E-FPDLADEYGV-MSVPAIVINGKVEF 64 (67)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHhCCceEEEEEEcc----c-CHhHHHHcCC-cccCEEEECCEEEE
Confidence 47899999999999998888765 4555554443 2 2334433333 47999999887654
No 134
>PTZ00062 glutaredoxin; Provisional
Probab=97.24 E-value=0.0013 Score=50.52 Aligned_cols=71 Identities=18% Similarity=0.102 Sum_probs=55.0
Q ss_pred ceEEecc-----CCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHH
Q 027575 3 EVKLLGT-----LPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYI 75 (221)
Q Consensus 3 ~~~Ly~~-----~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL 75 (221)
++.||.- |.||||.++.-+|...||+|+...++-. +.....+.+.+.. .++|.+..||..|.+...+.+..
T Consensus 114 ~Vvvf~Kg~~~~p~C~~C~~~k~~L~~~~i~y~~~DI~~d-~~~~~~l~~~sg~-~TvPqVfI~G~~IGG~d~l~~l~ 189 (204)
T PTZ00062 114 KILLFMKGSKTFPFCRFSNAVVNMLNSSGVKYETYNIFED-PDLREELKVYSNW-PTYPQLYVNGELIGGHDIIKELY 189 (204)
T ss_pred CEEEEEccCCCCCCChhHHHHHHHHHHcCCCEEEEEcCCC-HHHHHHHHHHhCC-CCCCeEEECCEEEcChHHHHHHH
Confidence 4677744 6899999999999999999998877633 2334556666665 68999999999998887777643
No 135
>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.
Probab=96.84 E-value=0.0016 Score=45.13 Aligned_cols=33 Identities=12% Similarity=0.044 Sum_probs=30.6
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDV 36 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~ 36 (221)
++||+.+.||+|++++-.|..+|++|+.+.+.-
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~~ 33 (111)
T cd03036 1 LKFYEYPKCSTCRKAKKWLDEHGVDYTAIDIVE 33 (111)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCceEEecccC
Confidence 589999999999999999999999999988754
No 136
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=96.80 E-value=0.002 Score=44.13 Aligned_cols=33 Identities=15% Similarity=0.295 Sum_probs=30.5
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDV 36 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~ 36 (221)
+++|+.+.||+|++++-.|..+|++|+.+.+.-
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~~ 33 (105)
T cd02977 1 ITIYGNPNCSTSRKALAWLEEHGIEYEFIDYLK 33 (105)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCCcEEEeecc
Confidence 579999999999999999999999999998753
No 137
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=96.79 E-value=0.0022 Score=45.76 Aligned_cols=33 Identities=15% Similarity=0.049 Sum_probs=30.8
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDV 36 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~ 36 (221)
+++|+.+.||+|++++-.|..+||+|+.+.+.-
T Consensus 2 i~iY~~~~C~~C~ka~~~L~~~gi~~~~idi~~ 34 (131)
T PRK01655 2 VTLFTSPSCTSCRKAKAWLEEHDIPFTERNIFS 34 (131)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCcEEeeccC
Confidence 799999999999999999999999999998753
No 138
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=96.69 E-value=0.0015 Score=56.25 Aligned_cols=106 Identities=13% Similarity=0.293 Sum_probs=74.9
Q ss_pred CCccccchHHHHHHHHhhCC-CCCCCCCCHHHHHHHHHHHHHhhhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHhcccC
Q 027575 61 GEKPVCDSMVILEYIEEMWP-QSPLMPNDPYDRALARFWIKFGEDKGVAVWKMFHSNQDEESRMKEILEMLQTIEEHGIG 139 (221)
Q Consensus 61 ~~~~i~es~~I~~yL~~~~~-~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~e~~L~ 139 (221)
+|..+.++..+..|...... .+.+++.+ .++.++..|.++.... ....+...+..| +.+|.
T Consensus 44 d~~~l~~a~~~~~~~~~~~~~~~~lf~~~-~d~~~vd~w~~~s~~~----------------~~~~~s~~~~~l-d~~l~ 105 (712)
T KOG1147|consen 44 DGRKLNGATEPVVYSAALAKADPKLFGNN-IDRSQVDHWVSFSSTF----------------SFDEISSSLSEL-DKFLV 105 (712)
T ss_pred ccccccCCccchhhhhhhcccCHhHcCCc-ccHHHHHHHHHHhhhc----------------chHHHHHHHHHH-Hhhhh
Confidence 45666666677777664442 33588877 7999999999887642 134566777888 88888
Q ss_pred CCCeeecCCCchhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHH
Q 027575 140 EKKIFHGDKIGSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFE 188 (221)
Q Consensus 140 ~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~ 188 (221)
-..||+|.++|+||+++|++++.-....+... . ...+-++.+|++
T Consensus 106 ~~t~lvg~sls~Ad~aiw~~l~~n~~~~~~lk--~--~k~~~~v~Rw~~ 150 (712)
T KOG1147|consen 106 LRTFLVGNSLSIADFAIWGALHSNGMRQEQLK--A--KKDYQNVERWYD 150 (712)
T ss_pred HHHHhhccchhHHHHHHHHHHhcccchHHHHH--h--hCCchhhhhhcC
Confidence 78899999999999999998876422222111 0 345678899988
No 139
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=96.66 E-value=0.0033 Score=43.82 Aligned_cols=32 Identities=19% Similarity=0.107 Sum_probs=30.3
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEcc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEED 35 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~ 35 (221)
+++|+.+.|++|++++-.|..+|++|+.+.+.
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~gi~~~~idi~ 33 (115)
T cd03032 2 IKLYTSPSCSSCRKAKQWLEEHQIPFEERNLF 33 (115)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCceEEEecC
Confidence 78999999999999999999999999998874
No 140
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=96.64 E-value=0.0021 Score=45.72 Aligned_cols=67 Identities=19% Similarity=0.347 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcc
Q 027575 119 EESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPV 195 (221)
Q Consensus 119 ~~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~ 195 (221)
..+...++...|..| +.++.......| ++|+-|+.+++.|+.+..+. |.. ++ |++.+|+++|.+.-.
T Consensus 57 t~~~i~~l~~~L~~L-e~ll~~~~~~n~-~LS~dDi~lFp~LR~Ltivk---gi~-~P----~~V~~Y~~~~s~~t~ 123 (132)
T PF04399_consen 57 TPELIAELNADLEEL-EPLLASPNAVNG-ELSIDDIILFPILRSLTIVK---GIQ-WP----PKVRAYMDRMSKATG 123 (132)
T ss_dssp HHHHHHHHHHHHHHH-HHH-SCTTBTTS-S--HHHHHHHHHHHHHCTCT---TS--------HHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHH-HHHhccccccCC-CCCHHHHHHHHHHhhhhhcc---CCc-CC----HHHHHHHHHHHHHcC
Confidence 356788899999999 888875544444 89999999999999884332 321 12 699999999987544
No 141
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=96.55 E-value=0.0072 Score=42.71 Aligned_cols=67 Identities=15% Similarity=0.306 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcch
Q 027575 120 ESRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVI 196 (221)
Q Consensus 120 ~~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 196 (221)
.....++...|..| +..+...... ++.+|+-|+.++++|+.+..+. |.. ++ |++.+|+++|.+.-.+
T Consensus 59 ~~~i~~l~~~L~~l-~~ll~~~~~~-n~~ls~DDi~lFp~LR~Lt~vk---gi~-~P----~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 59 PQYIAALNALLEEL-DPLILSSEAV-NGQLSTDDIILFPILRNLTLVK---GLV-FP----PKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHH-HHHHcCcccc-CCcCCHHHHHHHHHHhhhhhhc---CCC-CC----HHHHHHHHHHHHHhCC
Confidence 45678888888888 8888544444 5579999999999999986543 322 22 7999999999986543
No 142
>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.
Probab=96.48 E-value=0.015 Score=37.71 Aligned_cols=55 Identities=27% Similarity=0.295 Sum_probs=39.5
Q ss_pred ceEEeccCCChhHHHHHHHHHhh--CCCceEEEccccCccCchHHHhhCCCCCcccEEEeCC
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLK--GVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGE 62 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~--gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~ 62 (221)
+++||+.++|+.|..+.-+|... ..+++...+|.. ...+++.+.+. .||||..+|
T Consensus 1 ~l~l~~k~~C~LC~~a~~~L~~~~~~~~~~l~~vDI~--~d~~l~~~Y~~---~IPVl~~~~ 57 (81)
T PF05768_consen 1 TLTLYTKPGCHLCDEAKEILEEVAAEFPFELEEVDID--EDPELFEKYGY---RIPVLHIDG 57 (81)
T ss_dssp -EEEEE-SSSHHHHHHHHHHHHCCTTSTCEEEEEETT--TTHHHHHHSCT---STSEEEETT
T ss_pred CEEEEcCCCCChHHHHHHHHHHHHhhcCceEEEEECC--CCHHHHHHhcC---CCCEEEEcC
Confidence 47999999999999999999965 446667777765 33444444332 699999877
No 143
>PRK10026 arsenate reductase; Provisional
Probab=96.46 E-value=0.0051 Score=44.35 Aligned_cols=34 Identities=6% Similarity=0.077 Sum_probs=32.3
Q ss_pred CcceEEeccCCChhHHHHHHHHHhhCCCceEEEc
Q 027575 1 MAEVKLLGTLPSPFVYRVIWALKLKGVPFEFVEE 34 (221)
Q Consensus 1 M~~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v 34 (221)
|+++++|+.+.|.=|++++-.|..+|++|+.+.+
T Consensus 1 m~~i~iY~~p~Cst~RKA~~wL~~~gi~~~~~d~ 34 (141)
T PRK10026 1 MSNITIYHNPACGTSRNTLEMIRNSGTEPTIIHY 34 (141)
T ss_pred CCEEEEEeCCCCHHHHHHHHHHHHCCCCcEEEee
Confidence 8789999999999999999999999999998876
No 144
>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2. This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.
Probab=96.41 E-value=0.018 Score=36.89 Aligned_cols=57 Identities=16% Similarity=0.115 Sum_probs=41.9
Q ss_pred CcceEEeccCCChhHHHH----HHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCcccc
Q 027575 1 MAEVKLLGTLPSPFVYRV----IWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVC 66 (221)
Q Consensus 1 M~~~~Ly~~~~sp~~~~~----~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~ 66 (221)
|. +.+|+ ++||.|..+ .-++...|++++.+.++- .++..+.+- ..+|+++.||..+.
T Consensus 1 m~-i~~~a-~~C~~C~~~~~~~~~~~~e~~~~~~~~~v~~-----~~~a~~~~v--~~vPti~i~G~~~~ 61 (76)
T TIGR00412 1 MK-IQIYG-TGCANCQMTEKNVKKAVEELGIDAEFEKVTD-----MNEILEAGV--TATPGVAVDGELVI 61 (76)
T ss_pred CE-EEEEC-CCCcCHHHHHHHHHHHHHHcCCCeEEEEeCC-----HHHHHHcCC--CcCCEEEECCEEEE
Confidence 44 77887 999999988 668888899988888762 233444555 36999999886553
No 145
>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family. This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.
Probab=96.37 E-value=0.0054 Score=42.85 Aligned_cols=32 Identities=16% Similarity=0.367 Sum_probs=29.8
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEcc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEED 35 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~ 35 (221)
++||+.+.||+|++++-.|..+|++|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (117)
T TIGR01617 1 IKVYGSPNCTTCKKARRWLEANGIEYQFIDIG 32 (117)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCceEEEecC
Confidence 58999999999999999999999999988874
No 146
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=96.29 E-value=0.0077 Score=43.06 Aligned_cols=33 Identities=6% Similarity=-0.024 Sum_probs=30.8
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDV 36 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~ 36 (221)
+++|+.+.|+.|++++-.|..+||+|+.+.+.-
T Consensus 2 i~iY~~~~C~~crkA~~~L~~~~i~~~~~d~~~ 34 (132)
T PRK13344 2 IKIYTISSCTSCKKAKTWLNAHQLSYKEQNLGK 34 (132)
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence 789999999999999999999999999998753
No 147
>PRK12559 transcriptional regulator Spx; Provisional
Probab=96.21 E-value=0.013 Score=41.78 Aligned_cols=33 Identities=12% Similarity=-0.059 Sum_probs=30.7
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDV 36 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~ 36 (221)
+++|+.+.|+.|++++-.|..+|++|+.+.+.-
T Consensus 2 i~iY~~~~C~~crkA~~~L~~~gi~~~~~di~~ 34 (131)
T PRK12559 2 VVLYTTASCASCRKAKAWLEENQIDYTEKNIVS 34 (131)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCeEEEEeeC
Confidence 789999999999999999999999999988753
No 148
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=96.17 E-value=0.026 Score=37.59 Aligned_cols=68 Identities=19% Similarity=0.157 Sum_probs=50.7
Q ss_pred eEEeccCCCh------hHHHHHHHHHhhCCCceEEEccccCccCchHHHhhC----CCCCcccEEEeCCccccchHHHHH
Q 027575 4 VKLLGTLPSP------FVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYN----PVHKKIPVLVHGEKPVCDSMVILE 73 (221)
Q Consensus 4 ~~Ly~~~~sp------~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~----p~~g~vP~L~~~~~~i~es~~I~~ 73 (221)
++||+...+. .|++++.+|..+||+|+.+.++.. +....++.+.. +. .++|-+..||..|.+...+.+
T Consensus 2 i~vY~ts~~g~~~~k~~~~~v~~lL~~k~I~f~eiDI~~d-~~~r~em~~~~~~~~g~-~tvPQIFi~~~~iGg~ddl~~ 79 (92)
T cd03030 2 IKVYIASSSGSTEIKKRQQEVLGFLEAKKIEFEEVDISMN-EENRQWMRENVPNENGK-PLPPQIFNGDEYCGDYEAFFE 79 (92)
T ss_pred EEEEEecccccHHHHHHHHHHHHHHHHCCCceEEEecCCC-HHHHHHHHHhcCCCCCC-CCCCEEEECCEEeeCHHHHHH
Confidence 6788777665 377899999999999999999864 23345555543 23 589999999999888866555
No 149
>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=96.04 E-value=0.027 Score=35.44 Aligned_cols=66 Identities=23% Similarity=0.216 Sum_probs=47.1
Q ss_pred CcceEEeccCCChhHHHHHHHHHhhCCCceEEEccccC---------ccCchHHHhhCCC-CCcccEEEe-CCcccc
Q 027575 1 MAEVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFS---------NEKSALLLKYNPV-HKKIPVLVH-GEKPVC 66 (221)
Q Consensus 1 M~~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~---------~~~~~~~~~~~p~-~g~vP~L~~-~~~~i~ 66 (221)
|+..+||+...||-|-...-.|+-.+++|+.+.+.-.- .+..++|-+.-.. +--+|+|.. ||.++.
T Consensus 1 mskp~lfgsn~Cpdca~a~eyl~rl~v~yd~VeIt~Sm~NlKrFl~lRDs~~~Fd~vk~~gyiGIPall~~d~~vVl 77 (85)
T COG4545 1 MSKPKLFGSNLCPDCAPAVEYLERLNVDYDFVEITESMANLKRFLHLRDSRPEFDEVKSNGYIGIPALLTDDGKVVL 77 (85)
T ss_pred CCCceeeccccCcchHHHHHHHHHcCCCceeeehhhhhhhHHHHHhhhccchhHHhhhhcCcccceEEEeCCCcEEE
Confidence 78779999999999999999999999999999875420 1223444432222 135999996 555554
No 150
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=95.74 E-value=0.017 Score=39.58 Aligned_cols=32 Identities=22% Similarity=0.300 Sum_probs=29.9
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEcc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEED 35 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~ 35 (221)
+++|+.+.|+.|++++-.|..+|++|+.+.+.
T Consensus 1 i~iy~~~~C~~crka~~~L~~~~i~~~~~di~ 32 (105)
T cd03035 1 ITLYGIKNCDTVKKARKWLEARGVAYTFHDYR 32 (105)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCCeEEEecc
Confidence 58999999999999999999999999998874
No 151
>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=95.67 E-value=0.029 Score=37.47 Aligned_cols=68 Identities=19% Similarity=0.147 Sum_probs=51.5
Q ss_pred ccCCChhHHHHHHHHHhhC-CCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHh
Q 027575 8 GTLPSPFVYRVIWALKLKG-VPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEE 77 (221)
Q Consensus 8 ~~~~sp~~~~~~~~l~~~g-i~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~ 77 (221)
..|.|+|+.++--+|...| ++|..+.|-.+ +..+..+.+.+-. .++|-|-.+|..+.+|-.|.+..+.
T Consensus 26 ~~P~CGFS~~~vqiL~~~g~v~~~~vnVL~d-~eiR~~lk~~s~W-PT~PQLyi~GEfvGG~DIv~Em~q~ 94 (105)
T COG0278 26 EFPQCGFSAQAVQILSACGVVDFAYVDVLQD-PEIRQGLKEYSNW-PTFPQLYVNGEFVGGCDIVREMYQS 94 (105)
T ss_pred CCCCCCccHHHHHHHHHcCCcceeEEeeccC-HHHHhccHhhcCC-CCCceeeECCEEeccHHHHHHHHHc
Confidence 4688999999999999999 67766665432 2344555556665 6899999999999999888776643
No 152
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=95.65 E-value=0.02 Score=39.78 Aligned_cols=32 Identities=13% Similarity=-0.070 Sum_probs=30.1
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEcc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEED 35 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~ 35 (221)
++||+.+.|+-|++++-.|..+|++|+.+.+.
T Consensus 2 i~iy~~p~C~~crkA~~~L~~~gi~~~~~d~~ 33 (113)
T cd03033 2 IIFYEKPGCANNARQKALLEAAGHEVEVRDLL 33 (113)
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCCcEEeehh
Confidence 78999999999999999999999999998764
No 153
>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1. This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.
Probab=95.63 E-value=0.061 Score=34.43 Aligned_cols=57 Identities=14% Similarity=0.182 Sum_probs=38.6
Q ss_pred ceEEeccCCChhHHHHHHHHHh----hCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCc
Q 027575 3 EVKLLGTLPSPFVYRVIWALKL----KGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEK 63 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~----~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~ 63 (221)
.+++|+.++||+|..+.=.+.. .+..+....+|.. ... +..+.... ..+|++..||.
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~vd~~--~~~-~~~~~~~v-~~vPt~~~~g~ 62 (82)
T TIGR00411 2 KIELFTSPTCPYCPAAKRVVEEVAKEMGDAVEVEYINVM--ENP-QKAMEYGI-MAVPAIVINGD 62 (82)
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhcCceEEEEEeCc--cCH-HHHHHcCC-ccCCEEEECCE
Confidence 3789999999999988777653 3544666667654 323 33333343 46999998775
No 154
>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides. AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.
Probab=95.34 E-value=0.058 Score=35.69 Aligned_cols=58 Identities=12% Similarity=0.098 Sum_probs=39.0
Q ss_pred ceEEeccCCChhHHHHHHHHHhh-----CCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCcccc
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLK-----GVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVC 66 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~-----gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~ 66 (221)
++.+|..++||+|..+.-++... ++.++.+.++ ...+...+.+= ..+|+++.||..+.
T Consensus 15 ~i~~F~~~~C~~C~~~~~~~~~l~~~~~~i~~~~vd~~----~~~e~a~~~~V--~~vPt~vidG~~~~ 77 (89)
T cd03026 15 NFETYVSLSCHNCPDVVQALNLMAVLNPNIEHEMIDGA----LFQDEVEERGI--MSVPAIFLNGELFG 77 (89)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHHCCCceEEEEEhH----hCHHHHHHcCC--ccCCEEEECCEEEE
Confidence 47899999999999887766555 4555555544 33444444454 36999998876544
No 155
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=95.29 E-value=0.035 Score=38.79 Aligned_cols=34 Identities=15% Similarity=0.312 Sum_probs=30.9
Q ss_pred CcceEEeccCCChhHHHHHHHHHhhCCCceEEEcc
Q 027575 1 MAEVKLLGTLPSPFVYRVIWALKLKGVPFEFVEED 35 (221)
Q Consensus 1 M~~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~ 35 (221)
|+ +++|+.+.|.-|++++-.|+.+||+|+.+.+.
T Consensus 1 ~~-itiy~~p~C~t~rka~~~L~~~gi~~~~~~y~ 34 (117)
T COG1393 1 MM-ITIYGNPNCSTCRKALAWLEEHGIEYTFIDYL 34 (117)
T ss_pred Ce-EEEEeCCCChHHHHHHHHHHHcCCCcEEEEee
Confidence 44 89999999999999999999999999988764
No 156
>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.
Probab=94.85 E-value=0.08 Score=31.08 Aligned_cols=54 Identities=31% Similarity=0.237 Sum_probs=36.5
Q ss_pred eEEeccCCChhHHHHHHHHH-----hhCCCceEEEccccCccCchHHHhhCCCCCcccEEEe
Q 027575 4 VKLLGTLPSPFVYRVIWALK-----LKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH 60 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~-----~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~ 60 (221)
+.+|+...|++|++.+..+. ..++.+..+.++.. ..........+. +.+|+++.
T Consensus 1 l~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~P~~~~ 59 (69)
T cd01659 1 LVLFYAPWCPFCQALRPVLAELALLNKGVKFEAVDVDED--PALEKELKRYGV-GGVPTLVV 59 (69)
T ss_pred CEEEECCCChhHHhhhhHHHHHHhhCCCcEEEEEEcCCC--hHHhhHHHhCCC-ccccEEEE
Confidence 46788889999999999999 45566655555543 222222235665 68999986
No 157
>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B ....
Probab=94.84 E-value=0.16 Score=32.41 Aligned_cols=56 Identities=21% Similarity=0.354 Sum_probs=36.2
Q ss_pred eEEeccCCChhHHHHHH----HHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccc
Q 027575 4 VKLLGTLPSPFVYRVIW----ALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCD 67 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~----~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~e 67 (221)
++++ .+.||+|..+.- ++...|++++.+.+. + .++..+.+= ..+|+++.||...+.
T Consensus 3 I~v~-~~~C~~C~~~~~~~~~~~~~~~i~~ei~~~~----~-~~~~~~ygv--~~vPalvIng~~~~~ 62 (76)
T PF13192_consen 3 IKVF-SPGCPYCPELVQLLKEAAEELGIEVEIIDIE----D-FEEIEKYGV--MSVPALVINGKVVFV 62 (76)
T ss_dssp EEEE-CSSCTTHHHHHHHHHHHHHHTTEEEEEEETT----T-HHHHHHTT---SSSSEEEETTEEEEE
T ss_pred EEEe-CCCCCCcHHHHHHHHHHHHhcCCeEEEEEcc----C-HHHHHHcCC--CCCCEEEECCEEEEE
Confidence 7774 566999996555 555567777666652 2 444444444 479999999876543
No 158
>PRK10853 putative reductase; Provisional
Probab=94.60 E-value=0.068 Score=37.40 Aligned_cols=32 Identities=19% Similarity=0.299 Sum_probs=29.8
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEcc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEED 35 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~ 35 (221)
+++|+.+.|.=|++++-.|..+|++|+.+.+-
T Consensus 2 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~d~~ 33 (118)
T PRK10853 2 VTLYGIKNCDTIKKARRWLEAQGIDYRFHDYR 33 (118)
T ss_pred EEEEcCCCCHHHHHHHHHHHHcCCCcEEeehc
Confidence 79999999999999999999999999988763
No 159
>TIGR01616 nitro_assoc nitrogenase-associated protein. This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.
Probab=94.27 E-value=0.083 Score=37.39 Aligned_cols=33 Identities=18% Similarity=-0.004 Sum_probs=30.6
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCCceEEEcc
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEED 35 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~ 35 (221)
+++||+.+.|.=|++++-.|..+|++|+.+.+-
T Consensus 2 ~i~iY~~p~Cst~RKA~~~L~~~gi~~~~~d~~ 34 (126)
T TIGR01616 2 TIIFYEKPGCANNARQKAALKASGHDVEVQDIL 34 (126)
T ss_pred eEEEEeCCCCHHHHHHHHHHHHCCCCcEEEecc
Confidence 589999999999999999999999999998763
No 160
>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised. SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.
Probab=94.10 E-value=0.18 Score=34.09 Aligned_cols=70 Identities=23% Similarity=0.202 Sum_probs=40.6
Q ss_pred CcceEEeccCCChh------HHHHHHHHHhhCCCceEEEccccCccCchHHHhhC---------CCCCcccEEEeCCccc
Q 027575 1 MAEVKLLGTLPSPF------VYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYN---------PVHKKIPVLVHGEKPV 65 (221)
Q Consensus 1 M~~~~Ly~~~~sp~------~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~---------p~~g~vP~L~~~~~~i 65 (221)
|. +++|....|+. .+++..+|..++|+|+.+.+... +....++++.. +. ...|-+..||.-+
T Consensus 1 m~-I~vy~ss~sg~~~ikk~q~~v~~iL~a~kI~fe~vDIa~~-e~~r~~mr~~~g~~~~~~~~~~-~lpPqiF~~~~Y~ 77 (99)
T PF04908_consen 1 MV-IKVYISSISGSREIKKRQQRVLMILEAKKIPFEEVDIAMD-EEARQWMRENAGPEEKDPGNGK-PLPPQIFNGDEYC 77 (99)
T ss_dssp -S-EEEEE-SS-SSHHHHHHHHHHHHHHHHTT--EEEEETTT--HHHHHHHHHHT--CCCS-TSTT---S-EEEETTEEE
T ss_pred CE-EEEEEecccCCHHHHHHHHHHHHHHHHcCCCcEEEeCcCC-HHHHHHHHHhccccccCCCCCC-CCCCEEEeCCEEE
Confidence 55 88898776653 66899999999999998888764 23345555433 22 2346677777665
Q ss_pred cchHHHHH
Q 027575 66 CDSMVILE 73 (221)
Q Consensus 66 ~es~~I~~ 73 (221)
.+--.+-+
T Consensus 78 Gdye~f~e 85 (99)
T PF04908_consen 78 GDYEDFEE 85 (99)
T ss_dssp EEHHHHHH
T ss_pred eeHHHHHH
Confidence 55544443
No 161
>PHA02125 thioredoxin-like protein
Probab=94.10 E-value=0.18 Score=31.97 Aligned_cols=51 Identities=24% Similarity=0.285 Sum_probs=35.9
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEe
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH 60 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~ 60 (221)
+.+|+.++|+.|..+.-.|. ++.++...+|.. . ..++.+..-. ..+|++..
T Consensus 2 iv~f~a~wC~~Ck~~~~~l~--~~~~~~~~vd~~--~-~~~l~~~~~v-~~~PT~~~ 52 (75)
T PHA02125 2 IYLFGAEWCANCKMVKPMLA--NVEYTYVDVDTD--E-GVELTAKHHI-RSLPTLVN 52 (75)
T ss_pred EEEEECCCCHhHHHHHHHHH--HHhheEEeeeCC--C-CHHHHHHcCC-ceeCeEEC
Confidence 67899999999998877775 456666666653 3 3455544443 47999984
No 162
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=93.51 E-value=0.12 Score=35.80 Aligned_cols=32 Identities=19% Similarity=0.068 Sum_probs=29.3
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEcc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEED 35 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~ 35 (221)
+++|+.+.|+=|++++-.|..+|++|+.+.+.
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di~ 32 (114)
T TIGR00014 1 VTIYHNPRCSKSRNTLALLEDKGIEPEVVKYL 32 (114)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEecc
Confidence 58999999999999999999999999987753
No 163
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=93.51 E-value=0.13 Score=35.64 Aligned_cols=31 Identities=16% Similarity=0.120 Sum_probs=28.9
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEE 34 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v 34 (221)
+++|+.+.|.=|++++-.|..+|++|+.+.+
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di 31 (112)
T cd03034 1 ITIYHNPRCSKSRNALALLEEAGIEPEIVEY 31 (112)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEec
Confidence 5899999999999999999999999998875
No 164
>PF11287 DUF3088: Protein of unknown function (DUF3088); InterPro: IPR021439 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=93.30 E-value=0.37 Score=33.01 Aligned_cols=68 Identities=18% Similarity=0.164 Sum_probs=47.1
Q ss_pred CChhHHHHHHHHHhh---CCCceEEEccccCccCchHHHh-hCCCCCcccEEEe-CCc-------------cccchHHHH
Q 027575 11 PSPFVYRVIWALKLK---GVPFEFVEEDVFSNEKSALLLK-YNPVHKKIPVLVH-GEK-------------PVCDSMVIL 72 (221)
Q Consensus 11 ~sp~~~~~~~~l~~~---gi~~~~~~v~~~~~~~~~~~~~-~~p~~g~vP~L~~-~~~-------------~i~es~~I~ 72 (221)
+||.|-.+.-+|... .-..+.+.|+.. ..+.+..+ ++..+...|+|+- +|. .|.++..|+
T Consensus 23 ~Cp~c~~iEGlLa~~P~l~~~ldV~rV~f~--RPR~~vi~llGE~~QslPvLVL~~~~~~~~~~~~~~~~rfi~d~~~I~ 100 (112)
T PF11287_consen 23 YCPHCAAIEGLLASFPDLRERLDVRRVDFP--RPRQAVIALLGEANQSLPVLVLADGAPSPDDAGSHGGRRFIDDPRRIL 100 (112)
T ss_pred ECCchHHHHhHHhhChhhhhcccEEEeCCC--CchHHHHHHhChhccCCCEEEeCCCCCCcccccccCCeEEeCCHHHHH
Confidence 588888888777765 224666777765 44555443 3332246899995 333 689999999
Q ss_pred HHHHhhCC
Q 027575 73 EYIEEMWP 80 (221)
Q Consensus 73 ~yL~~~~~ 80 (221)
+||.++|+
T Consensus 101 ~~La~r~g 108 (112)
T PF11287_consen 101 RYLAERHG 108 (112)
T ss_pred HHHHHHcC
Confidence 99999986
No 165
>KOG0911 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=88.78 E-value=1.1 Score=34.74 Aligned_cols=68 Identities=13% Similarity=0.091 Sum_probs=53.0
Q ss_pred ccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHh
Q 027575 8 GTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEE 77 (221)
Q Consensus 8 ~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~ 77 (221)
..|-|+|++++--+|...|++|....|.-+ +..+.-+++.+-. .+.|=|-.+|..+.++-.|.+.+..
T Consensus 150 ~~P~CGFS~~~v~iL~~~nV~~~~fdIL~D-eelRqglK~fSdW-PTfPQlyI~GEFiGGlDIl~~m~~~ 217 (227)
T KOG0911|consen 150 EEPKCGFSRQLVGILQSHNVNYTIFDVLTD-EELRQGLKEFSDW-PTFPQLYVKGEFIGGLDILKEMHEK 217 (227)
T ss_pred CcccccccHHHHHHHHHcCCCeeEEeccCC-HHHHHHhhhhcCC-CCccceeECCEeccCcHHHHHHhhc
Confidence 357899999999999999999988887654 2344555566665 6899999999999888777665543
No 166
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=87.53 E-value=0.98 Score=33.66 Aligned_cols=39 Identities=33% Similarity=0.370 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhcccCCC---CeeecCC-CchhHHHHHHHHHHH
Q 027575 124 KEILEMLQTIEEHGIGEK---KIFHGDK-IGSLEIAFGSMLYWL 163 (221)
Q Consensus 124 ~~~~~~l~~l~e~~L~~~---~~l~G~~-~t~aD~~l~~~l~~~ 163 (221)
....+.+..| ++.|++. +|+.|++ +|-+||.+++.|..+
T Consensus 111 ~~a~~~l~~L-~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~ 153 (168)
T PF11801_consen 111 KLAMECLSLL-EELLGEWEEARYFFGDSKPSSLDCLAFAYLALL 153 (168)
T ss_pred HHHHHHHHHH-HHHHhhccccccccCCCCCCHHHHHHHHHHHHH
Confidence 4567788889 9999877 8888877 999999999877766
No 167
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=86.06 E-value=0.8 Score=40.46 Aligned_cols=72 Identities=14% Similarity=0.033 Sum_probs=43.5
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCC---ceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccc----hHHHHHHH
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVP---FEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCD----SMVILEYI 75 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~---~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~e----s~~I~~yL 75 (221)
.+++|..+.||||-.+.-++...-+. ++...+|-. . -+++.+..-. ..||.+..||..+.+ -..+++.+
T Consensus 119 ~i~~fv~~~Cp~Cp~~v~~~~~~a~~~~~i~~~~id~~--~-~~~~~~~~~v-~~VP~~~i~~~~~~~g~~~~~~~~~~~ 194 (517)
T PRK15317 119 HFETYVSLSCHNCPDVVQALNLMAVLNPNITHTMIDGA--L-FQDEVEARNI-MAVPTVFLNGEEFGQGRMTLEEILAKL 194 (517)
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHhCCCceEEEEEch--h-CHhHHHhcCC-cccCEEEECCcEEEecCCCHHHHHHHH
Confidence 47899999999998877666555432 223333332 3 3444443333 479999988765544 23456666
Q ss_pred Hhh
Q 027575 76 EEM 78 (221)
Q Consensus 76 ~~~ 78 (221)
.+.
T Consensus 195 ~~~ 197 (517)
T PRK15317 195 DTG 197 (517)
T ss_pred hcc
Confidence 543
No 168
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=85.16 E-value=0.86 Score=40.28 Aligned_cols=72 Identities=14% Similarity=0.072 Sum_probs=43.0
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCC---ceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccch----HHHHHHH
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVP---FEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDS----MVILEYI 75 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~---~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es----~~I~~yL 75 (221)
.+++|..+.||||-.+.-++....+. ++...+|-. ..++...+.+- ..||.+..||..+.+. ..+++.+
T Consensus 120 ~i~~f~~~~Cp~Cp~~v~~~~~~a~~~p~i~~~~id~~--~~~~~~~~~~v--~~VP~~~i~~~~~~~g~~~~~~~~~~l 195 (515)
T TIGR03140 120 HFETYVSLTCQNCPDVVQALNQMALLNPNISHTMIDGA--LFQDEVEALGI--QGVPAVFLNGEEFHNGRMDLAELLEKL 195 (515)
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEch--hCHHHHHhcCC--cccCEEEECCcEEEecCCCHHHHHHHH
Confidence 47899999999998877776655443 222223332 33444334444 4799999887655442 3345555
Q ss_pred Hhh
Q 027575 76 EEM 78 (221)
Q Consensus 76 ~~~ 78 (221)
.+.
T Consensus 196 ~~~ 198 (515)
T TIGR03140 196 EET 198 (515)
T ss_pred hhc
Confidence 443
No 169
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=84.31 E-value=2.4 Score=37.89 Aligned_cols=56 Identities=21% Similarity=0.344 Sum_probs=37.6
Q ss_pred ceEEeccCCChhHHHHHH----HHHhh-CCCceEEEccccCccCchHHH-hhCCCCCcccEEEeCCccc
Q 027575 3 EVKLLGTLPSPFVYRVIW----ALKLK-GVPFEFVEEDVFSNEKSALLL-KYNPVHKKIPVLVHGEKPV 65 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~----~l~~~-gi~~~~~~v~~~~~~~~~~~~-~~~p~~g~vP~L~~~~~~i 65 (221)
.+++|..++||||-.+.- ++.+. +|..+.+.+.-. +++. +.+- ..||.++.||.++
T Consensus 479 ~i~v~~~~~C~~Cp~~~~~~~~~~~~~~~i~~~~i~~~~~-----~~~~~~~~v--~~vP~~~i~~~~~ 540 (555)
T TIGR03143 479 NIKIGVSLSCTLCPDVVLAAQRIASLNPNVEAEMIDVSHF-----PDLKDEYGI--MSVPAIVVDDQQV 540 (555)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHhCCCceEEEEECccc-----HHHHHhCCc--eecCEEEECCEEE
Confidence 378888999999876554 44444 677766666532 3444 5554 4799999988554
No 170
>TIGR01295 PedC_BrcD bacteriocin transport accessory protein, putative. This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.
Probab=82.35 E-value=8.8 Score=26.79 Aligned_cols=61 Identities=16% Similarity=0.264 Sum_probs=33.7
Q ss_pred eEEeccCCChhHHHHHHHH----HhhCCCceEEEccccC--ccCc----hHHHhhC----CCCCcccEEEe--CCccc
Q 027575 4 VKLLGTLPSPFVYRVIWAL----KLKGVPFEFVEEDVFS--NEKS----ALLLKYN----PVHKKIPVLVH--GEKPV 65 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l----~~~gi~~~~~~v~~~~--~~~~----~~~~~~~----p~~g~vP~L~~--~~~~i 65 (221)
+..|+.++||+|+.+.=.| ...++++-.+.++... +... .++.+.. .. ..+|+++. +|..+
T Consensus 27 iv~f~~~~Cp~C~~~~P~l~~~~~~~~~~~y~vdvd~~~~~~~~~~~~~~~~~~~~~i~~~i-~~~PT~v~~k~Gk~v 103 (122)
T TIGR01295 27 TFFIGRKTCPYCRKFSGTLSGVVAQTKAPIYYIDSENNGSFEMSSLNDLTAFRSRFGIPTSF-MGTPTFVHITDGKQV 103 (122)
T ss_pred EEEEECCCChhHHHHhHHHHHHHHhcCCcEEEEECCCccCcCcccHHHHHHHHHHcCCcccC-CCCCEEEEEeCCeEE
Confidence 4567899999999854443 3445666555555321 0111 1333322 22 34999994 67443
No 171
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=82.25 E-value=1.9 Score=29.53 Aligned_cols=29 Identities=17% Similarity=0.353 Sum_probs=22.9
Q ss_pred eccCCChhHHHHHHHHHhhCCCceEEEcc
Q 027575 7 LGTLPSPFVYRVIWALKLKGVPFEFVEED 35 (221)
Q Consensus 7 y~~~~sp~~~~~~~~l~~~gi~~~~~~v~ 35 (221)
|+.+.|.-|++++-.|..+|++|+.+.+.
T Consensus 1 Y~~~~C~t~rka~~~L~~~gi~~~~~d~~ 29 (110)
T PF03960_consen 1 YGNPNCSTCRKALKWLEENGIEYEFIDYK 29 (110)
T ss_dssp EE-TT-HHHHHHHHHHHHTT--EEEEETT
T ss_pred CcCCCCHHHHHHHHHHHHcCCCeEeehhh
Confidence 78899999999999999999999987764
No 172
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=75.77 E-value=14 Score=28.45 Aligned_cols=55 Identities=13% Similarity=0.081 Sum_probs=34.1
Q ss_pred eEEeccCCChhHHHHHHHHHhhCC---CceEEEccccCccCchHHHhhCCCCCcccEEEeCC
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGV---PFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGE 62 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi---~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~ 62 (221)
+++|+.++||+|..+.-++...-- .++...+|.. . .+++.+.... ..+|+++.++
T Consensus 137 I~~F~a~~C~~C~~~~~~l~~l~~~~~~i~~~~vD~~--~-~~~~~~~~~V-~~vPtl~i~~ 194 (215)
T TIGR02187 137 IEVFVTPTCPYCPYAVLMAHKFALANDKILGEMIEAN--E-NPDLAEKYGV-MSVPKIVINK 194 (215)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHhcCceEEEEEeCC--C-CHHHHHHhCC-ccCCEEEEec
Confidence 567899999999988877665421 2333445553 3 3444443333 4699999743
No 173
>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD. It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.
Probab=72.94 E-value=12 Score=24.90 Aligned_cols=54 Identities=15% Similarity=-0.054 Sum_probs=31.2
Q ss_pred eEEeccCCChhHHHHHHHH--------HhhCCCceEEEccccC-ccCchHHHhhCCCCCcccEEE
Q 027575 4 VKLLGTLPSPFVYRVIWAL--------KLKGVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLV 59 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l--------~~~gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~ 59 (221)
+..|+.++|++|+...-.+ ...+ .+....++... +....++.+.... ..+|++.
T Consensus 15 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~~~i-~~~Pti~ 77 (104)
T cd02953 15 FVDFTADWCVTCKVNEKVVFSDPEVQAALKK-DVVLLRADWTKNDPEITALLKRFGV-FGPPTYL 77 (104)
T ss_pred EEEEEcchhHHHHHHHHHhcCCHHHHHHHhC-CeEEEEEecCCCCHHHHHHHHHcCC-CCCCEEE
Confidence 4577889999999876332 2232 46666666542 1112344443333 4699888
No 174
>PF00085 Thioredoxin: Thioredoxin; InterPro: IPR013766 Thioredoxins [, , , ] are small disulphide-containing redox proteins that have been found in all the kingdoms of living organisms. Thioredoxin serves as a general protein disulphide oxidoreductase. It interacts with a broad range of proteins by a redox mechanism based on reversible oxidation of two cysteine thiol groups to a disulphide, accompanied by the transfer of two electrons and two protons. The net result is the covalent interconversion of a disulphide and a dithiol. In the NADPH-dependent protein disulphide reduction, thioredoxin reductase (TR) catalyses the reduction of oxidised thioredoxin (trx) by NADPH using FAD and its redox-active disulphide; reduced thioredoxin then directly reduces the disulphide in the substrate protein []. Thioredoxin is present in prokaryotes and eukaryotes and the sequence around the redox-active disulphide bond is well conserved. All thioredoxins contain a cis-proline located in a loop preceding beta-strand 4, which makes contact with the active site cysteines, and is important for stability and function []. Thioredoxin belongs to a structural family that includes glutaredoxin, glutathione peroxidase, bacterial protein disulphide isomerase DsbA, and the N-terminal domain of glutathione transferase []. Thioredoxins have a beta-alpha unit preceding the motif common to all these proteins. A number of eukaryotic proteins contain domains evolutionary related to thioredoxin, most of them are protein disulphide isomerases (PDI). PDI (5.3.4.1 from EC) [, , ] is an endoplasmic reticulum multi-functional enzyme that catalyses the formation and rearrangement of disulphide bonds during protein folding []. All PDI contains two or three (ERp72) copies of the thioredoxin domain, each of which contributes to disulphide isomerase activity, but which are functionally non-equivalent []. Moreover, PDI exhibits chaperone-like activity towards proteins that contain no disulphide bonds, i.e. behaving independently of its disulphide isomerase activity []. The various forms of PDI which are currently known are: PDI major isozyme; a multifunctional protein that also function as the beta subunit of prolyl 4-hydroxylase (1.14.11.2 from EC), as a component of oligosaccharyl transferase (2.4.1.119 from EC), as thyroxine deiodinase (3.8.1.4 from EC), as glutathione-insulin transhydrogenase (1.8.4.2 from EC) and as a thyroid hormone-binding protein ERp60 (ER-60; 58 Kd microsomal protein). ERp60 was originally thought to be a phosphoinositide-specific phospholipase C isozyme and later to be a protease. ERp72. ERp5. Bacterial proteins that act as thiol:disulphide interchange proteins that allows disulphide bond formation in some periplasmic proteins also contain a thioredoxin domain. These proteins include: Escherichia coli DsbA (or PrfA) and its orthologs in Vibrio cholerae (TtcpG) and Haemophilus influenzae (Por). E. coli DsbC (or XpRA) and its orthologues in Erwinia chrysanthemi and H. influenzae. E. coli DsbD (or DipZ) and its H. influenzae orthologue. E. coli DsbE (or CcmG) and orthologues in H. influenzae. Rhodobacter capsulatus (Rhodopseudomonas capsulata) (HelX), Rhiziobiacae (CycY and TlpA). This entry represents the thioredoxin domain.; GO: 0045454 cell redox homeostasis; PDB: 3ED3_B 1EP7_A 1EP8_B 1TOF_A 2OE3_B 2OE1_B 2OE0_B 1V98_A 3H79_A 3CXG_A ....
Probab=72.91 E-value=23 Score=22.99 Aligned_cols=69 Identities=25% Similarity=0.262 Sum_probs=41.3
Q ss_pred eEEeccCCChhHHHHHHHH-----HhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEe--CCccc------cchHH
Q 027575 4 VKLLGTLPSPFVYRVIWAL-----KLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH--GEKPV------CDSMV 70 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l-----~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~--~~~~i------~es~~ 70 (221)
+..|+.++|+.|+...=.+ .+.+ ++....+|.. . ...+.+.--. ..+|++.. +|... .+...
T Consensus 21 vv~f~~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~--~-~~~l~~~~~v-~~~Pt~~~~~~g~~~~~~~g~~~~~~ 95 (103)
T PF00085_consen 21 VVYFYAPWCPPCKAFKPILEKLAKEYKD-NVKFAKVDCD--E-NKELCKKYGV-KSVPTIIFFKNGKEVKRYNGPRNAES 95 (103)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHHHHTTT-TSEEEEEETT--T-SHHHHHHTTC-SSSSEEEEEETTEEEEEEESSSSHHH
T ss_pred EEEEeCCCCCccccccceeccccccccc-ccccchhhhh--c-cchhhhccCC-CCCCEEEEEECCcEEEEEECCCCHHH
Confidence 5677889999999876433 2333 5666666664 3 3344433333 47999984 65332 24456
Q ss_pred HHHHHHh
Q 027575 71 ILEYIEE 77 (221)
Q Consensus 71 I~~yL~~ 77 (221)
|.++|++
T Consensus 96 l~~~i~~ 102 (103)
T PF00085_consen 96 LIEFIEK 102 (103)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 6666654
No 175
>cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains. The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress.
Probab=70.83 E-value=21 Score=23.32 Aligned_cols=57 Identities=16% Similarity=0.042 Sum_probs=33.7
Q ss_pred eEEeccCCChhHHHHHHHHHh----hCCCceEEEccccCccCchHHH-hhCCCCCcccEEEe--CCccc
Q 027575 4 VKLLGTLPSPFVYRVIWALKL----KGVPFEFVEEDVFSNEKSALLL-KYNPVHKKIPVLVH--GEKPV 65 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~----~gi~~~~~~v~~~~~~~~~~~~-~~~p~~g~vP~L~~--~~~~i 65 (221)
+.+|+.++|+.|....-.+.. .+-.+....+|.. . .+++. ..+- ..+|++.. +|..+
T Consensus 17 lv~f~a~~C~~C~~~~~~l~~l~~~~~~~v~~~~id~d--~-~~~l~~~~~v--~~vPt~~i~~~g~~v 80 (97)
T cd02949 17 LVLYTSPTCGPCRTLKPILNKVIDEFDGAVHFVEIDID--E-DQEIAEAAGI--MGTPTVQFFKDKELV 80 (97)
T ss_pred EEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECC--C-CHHHHHHCCC--eeccEEEEEECCeEE
Confidence 567788999999988766644 1213444555543 2 23333 3344 36898883 66443
No 176
>cd02989 Phd_like_TxnDC9 Phosducin (Phd)-like family, Thioredoxin (TRX) domain containing protein 9 (TxnDC9) subfamily; composed of predominantly uncharacterized eukaryotic proteins, containing a TRX-like domain without the redox active CXXC motif. The gene name for the human protein is TxnDC9. The two characterized members are described as Phd-like proteins, PLP1 of Saccharomyces cerevisiae and PhLP3 of Dictyostelium discoideum. Gene disruption experiments show that both PLP1 and PhLP3 are non-essential proteins. Unlike Phd and most Phd-like proteins, members of this group do not contain the Phd N-terminal helical domain which is implicated in binding to the G protein betagamma subunit.
Probab=69.49 E-value=17 Score=24.88 Aligned_cols=59 Identities=14% Similarity=0.062 Sum_probs=36.0
Q ss_pred eEEeccCCChhHHHHHHHHHhhCC---CceEEEccccCccCchHHHhhCCCCCcccEEEe--CCcccc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGV---PFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH--GEKPVC 66 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi---~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~--~~~~i~ 66 (221)
+..|+.++|+-|+.+.-.+....- ......+|.. . .+++.+.... ..+|+++. +|..+.
T Consensus 26 vV~f~a~~c~~C~~~~p~l~~la~~~~~i~f~~Vd~~--~-~~~l~~~~~v-~~vPt~l~fk~G~~v~ 89 (113)
T cd02989 26 VCHFYHPEFFRCKIMDKHLEILAKKHLETKFIKVNAE--K-APFLVEKLNI-KVLPTVILFKNGKTVD 89 (113)
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHcCCCEEEEEEcc--c-CHHHHHHCCC-ccCCEEEEEECCEEEE
Confidence 456788999999987766644211 2345566653 2 3445544443 57999984 776654
No 177
>cd02975 PfPDO_like_N Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding. PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions.
Probab=69.43 E-value=16 Score=24.99 Aligned_cols=53 Identities=9% Similarity=0.018 Sum_probs=31.8
Q ss_pred eEEe-ccCCChhHHHHHHHHHhhCCC---ceEEEccccCccCchHHHhhCCCCCcccEEEe
Q 027575 4 VKLL-GTLPSPFVYRVIWALKLKGVP---FEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH 60 (221)
Q Consensus 4 ~~Ly-~~~~sp~~~~~~~~l~~~gi~---~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~ 60 (221)
+.++ +.++||+|+.++-++....-. ++...++.. . .+++...-.. ..+|++..
T Consensus 25 vvv~f~a~wC~~C~~~~~~l~~la~~~~~i~~~~vd~d--~-~~~l~~~~~v-~~vPt~~i 81 (113)
T cd02975 25 LVVFSSKEGCQYCEVTKQLLEELSELSDKLKLEIYDFD--E-DKEKAEKYGV-ERVPTTIF 81 (113)
T ss_pred EEEEeCCCCCCChHHHHHHHHHHHHhcCceEEEEEeCC--c-CHHHHHHcCC-CcCCEEEE
Confidence 4445 668999999887777644322 233444443 2 3455544444 57999995
No 178
>cd02947 TRX_family TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functio
Probab=68.88 E-value=25 Score=21.84 Aligned_cols=54 Identities=20% Similarity=0.074 Sum_probs=33.0
Q ss_pred eEEeccCCChhHHHHHHHHHh-----hCCCceEEEccccCccCchHHHhhCCCCCcccEEEe--CCc
Q 027575 4 VKLLGTLPSPFVYRVIWALKL-----KGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH--GEK 63 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~-----~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~--~~~ 63 (221)
+..|+.++|++|+...-.+.. .++.+-.+.++. ...+...... ..+|+++. +|.
T Consensus 14 ll~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~~~~~~~~v-~~~P~~~~~~~g~ 74 (93)
T cd02947 14 VVDFWAPWCGPCKAIAPVLEELAEEYPKVKFVKVDVDE-----NPELAEEYGV-RSIPTFLFFKNGK 74 (93)
T ss_pred EEEEECCCChhHHHhhHHHHHHHHHCCCceEEEEECCC-----ChhHHHhcCc-ccccEEEEEECCE
Confidence 567788999999988777766 455544443332 2333333333 36898774 554
No 179
>PHA03075 glutaredoxin-like protein; Provisional
Probab=67.64 E-value=12 Score=25.98 Aligned_cols=65 Identities=14% Similarity=0.168 Sum_probs=45.8
Q ss_pred Cc-ceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCC--ccccchHHHHHHHHh
Q 027575 1 MA-EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGE--KPVCDSMVILEYIEE 77 (221)
Q Consensus 1 M~-~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~--~~i~es~~I~~yL~~ 77 (221)
|. ++.|+|-|.|+-|+-+.=+|....-+|+...|+... . .... |++-+|-.|+ ..| ..+.+||..
T Consensus 1 mK~tLILfGKP~C~vCe~~s~~l~~ledeY~ilrVNIlS-f-------FsK~-g~v~~lg~d~~y~lI---nn~~~~lgn 68 (123)
T PHA03075 1 MKKTLILFGKPLCSVCESISEALKELEDEYDILRVNILS-F-------FSKD-GQVKVLGMDKGYTLI---NNFFKHLGN 68 (123)
T ss_pred CCceEEEeCCcccHHHHHHHHHHHHhhccccEEEEEeee-e-------eccC-CceEEEecccceehH---HHHHHhhcc
Confidence 65 688999999999999999999999999999887641 1 1112 6777777543 222 245566654
No 180
>cd02959 ERp19 Endoplasmic reticulum protein 19 (ERp19) family; ERp19 is also known as ERp18, a protein located in the ER containing one redox active TRX domain. Denaturation studies indicate that the reduced form is more stable than the oxidized form, suggesting that the protein is involved in disulfide bond formation. In vitro, ERp19 has been shown to possess thiol-disulfide oxidase activity which is dependent on the presence of both active site cysteines. Although described as protein disulfide isomerase (PDI)-like, the protein does not complement for PDI activity. ERp19 shows a wide tissue distribution but is most abundant in liver, testis, heart and kidney.
Probab=65.33 E-value=38 Score=23.30 Aligned_cols=60 Identities=12% Similarity=-0.031 Sum_probs=32.4
Q ss_pred eEEeccCCChhHHHHHHHHHh------hCCCceEEEccccCccCchHHHhhCCCCCcccEEEe---CCcccc
Q 027575 4 VKLLGTLPSPFVYRVIWALKL------KGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH---GEKPVC 66 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~------~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~---~~~~i~ 66 (221)
+.-|+.++|+.|+...=.+.. .+..|..+.++-. . .+.-...+..+|-+|+++. +|..+.
T Consensus 23 lV~F~a~WC~~C~~~~~~~~~~~~~~~~~~~fv~v~vd~~--~-~~~~~~~~~~g~~vPt~~f~~~~Gk~~~ 91 (117)
T cd02959 23 MLLIHKTWCGACKALKPKFAESKEISELSHNFVMVNLEDD--E-EPKDEEFSPDGGYIPRILFLDPSGDVHP 91 (117)
T ss_pred EEEEeCCcCHHHHHHHHHHhhhHHHHhhcCcEEEEEecCC--C-CchhhhcccCCCccceEEEECCCCCCch
Confidence 445678899999987554444 2234444444422 1 1111244555235999883 555544
No 181
>PF09868 DUF2095: Uncharacterized protein conserved in archaea (DUF2095); InterPro: IPR018662 This domain, found in various hypothetical prokaryotic proteins, has no known function.
Probab=65.21 E-value=5.8 Score=27.37 Aligned_cols=65 Identities=12% Similarity=0.023 Sum_probs=44.0
Q ss_pred hHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEe---CCccccchHHHHHHHHhhC
Q 027575 14 FVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH---GEKPVCDSMVILEYIEEMW 79 (221)
Q Consensus 14 ~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~---~~~~i~es~~I~~yL~~~~ 79 (221)
|...++=+....|++.+...++-.. ...++-....|+.|-+|++++ .-.+.-|...|++||+...
T Consensus 24 fP~LakEl~e~~g~~I~~~r~~~~~-~l~~e~~~~~~~sGy~PtViD~lrRC~T~EEALEVInylek~G 91 (128)
T PF09868_consen 24 FPALAKELEEEEGISIEGYRLDEEQ-VLEEEEEEPDDFSGYNPTVIDYLRRCKTDEEALEVINYLEKRG 91 (128)
T ss_pred hHHHHHHHhccCCCceeeeechhhh-hhhhccccCCCccCCCChHHHHHHHhCcHHHHHHHHHHHHHhC
Confidence 4455666777888888776665320 111222235677788999886 4577888999999999874
No 182
>cd02984 TRX_PICOT TRX domain, PICOT (for PKC-interacting cousin of TRX) subfamily; PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT contains an N-terminal TRX-like domain, which does not contain the catalytic CXXC motif, followed by one to three glutaredoxin domains. The TRX-like domain is required for interaction with PKC theta. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli.
Probab=61.06 E-value=42 Score=21.61 Aligned_cols=57 Identities=11% Similarity=-0.018 Sum_probs=35.6
Q ss_pred eEEeccCCChhHHHHHHHHHhh----CCCceEEEccccCccCchHHHhhCCCCCcccEEEe--CCcc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLK----GVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH--GEKP 64 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~----gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~--~~~~ 64 (221)
+..|+.++|+.|+++.-.+... +..+....++.. ...+-..+.+.. .+|++.. +|..
T Consensus 18 ~v~f~~~~C~~C~~~~~~l~~l~~~~~~~i~~~~vd~~--~~~~~~~~~~i~--~~Pt~~~~~~g~~ 80 (97)
T cd02984 18 VLHFWAPWAEPCKQMNQVFEELAKEAFPSVLFLSIEAE--ELPEISEKFEIT--AVPTFVFFRNGTI 80 (97)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHhCCceEEEEEccc--cCHHHHHhcCCc--cccEEEEEECCEE
Confidence 4567889999999887666542 334555666653 333333455653 5998884 6654
No 183
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=58.67 E-value=4.1 Score=31.76 Aligned_cols=59 Identities=12% Similarity=0.188 Sum_probs=43.4
Q ss_pred HHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHHHHHHHHHHhcccccCCCCCchHHHHHHHHhcCcchh
Q 027575 127 LEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLYWLQILEDIVGVKLFDSHKFPGLHAWFENFKKAPVIE 197 (221)
Q Consensus 127 ~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 197 (221)
.+.+..+ +..|.+.+|..|.+++-+|+.++..+.-- .. ...+++..+|+.++.+...+.
T Consensus 10 ~~glk~l-~~sLA~ks~~~g~~~s~edv~vf~al~~e----------p~-s~~~v~~~~w~~~l~a~~~~~ 68 (231)
T KOG1668|consen 10 PAGLKKL-NKSLAEKSYIEGYQLSKEDVVVFAALGVE----------PQ-SARLVNAERWYSKLEALLRLL 68 (231)
T ss_pred hhhhhhh-hHhhhcccCCCCCCcccccceeehhcccC----------cc-hhhhhHHHHHHHHHHHHHHHH
Confidence 4677889 99999999999999999999977644211 11 346678888888777654443
No 184
>cd02963 TRX_DnaJ TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain. DnaJ is a member of the 40 kDa heat-shock protein (Hsp40) family of molecular chaperones, which regulate the activity of Hsp70s. TRX is involved in the redox regulation of many protein substrates through the reduction of disulfide bonds. TRX has been implicated to catalyse the reduction of Hsp33, a chaperone holdase that binds to unfolded protein intermediates. The presence of DnaJ and TRX domains in members of this family suggests that they could be involved in a redox-regulated chaperone network.
Probab=58.57 E-value=50 Score=22.27 Aligned_cols=57 Identities=7% Similarity=-0.044 Sum_probs=31.5
Q ss_pred eEEeccCCChhHHHHHHHH-----HhhCCCceEEEccccCccCchHHHhhCCCCCcccEEE--eCCcc
Q 027575 4 VKLLGTLPSPFVYRVIWAL-----KLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLV--HGEKP 64 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l-----~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~--~~~~~ 64 (221)
+..|+.++|+.|+...=.+ .+.+..+....++.. . .+.+.....- ..+|++. .+|..
T Consensus 28 lV~F~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~d--~-~~~l~~~~~V-~~~Pt~~i~~~g~~ 91 (111)
T cd02963 28 LIKITSDWCFSCIHIEPVWKEVIQELEPLGVGIATVNAG--H-ERRLARKLGA-HSVPAIVGIINGQV 91 (111)
T ss_pred EEEEECCccHhHHHhhHHHHHHHHHHHhcCceEEEEecc--c-cHHHHHHcCC-ccCCEEEEEECCEE
Confidence 4567889999998654332 333334455555553 2 2333333333 4799888 35643
No 185
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=53.90 E-value=9.5 Score=26.69 Aligned_cols=26 Identities=15% Similarity=0.307 Sum_probs=13.1
Q ss_pred cccEEEe--CCccccchHHHHHHHHhhC
Q 027575 54 KIPVLVH--GEKPVCDSMVILEYIEEMW 79 (221)
Q Consensus 54 ~vP~L~~--~~~~i~es~~I~~yL~~~~ 79 (221)
..|-|.+ +|..+.|+.||++|+..-|
T Consensus 35 ~~~~L~~~~~gF~L~e~NAIvrYl~nDF 62 (122)
T PF09635_consen 35 SGPLLKDKKSGFELFEPNAIVRYLANDF 62 (122)
T ss_dssp -S--EEE-S--S----HHHHHHHHTT--
T ss_pred ccceeeecCCceEEecccHHHHHHHhhc
Confidence 3488864 6899999999999998875
No 186
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=53.12 E-value=20 Score=28.91 Aligned_cols=61 Identities=13% Similarity=-0.001 Sum_probs=44.6
Q ss_pred hHHHHHHHHHhhCCCceEEEccccCccCchHHHhh----CCCCCcccEEEeCCccccchHHHHHHHH
Q 027575 14 FVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKY----NPVHKKIPVLVHGEKPVCDSMVILEYIE 76 (221)
Q Consensus 14 ~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~----~p~~g~vP~L~~~~~~i~es~~I~~yL~ 76 (221)
-|..||.+|+-.+|.|+...|.+.. ...+++..+ .-. -.+|.+..+|.-|.+...|.+.-+
T Consensus 149 ~C~~VR~ilesf~V~v~ERDVSMd~-~fr~EL~~~lg~~~~~-~~LPrVFV~GryIGgaeeV~~LnE 213 (281)
T KOG2824|consen 149 DCNAVRAILESFRVKVDERDVSMDS-EFREELQELLGEDEKA-VSLPRVFVKGRYIGGAEEVVRLNE 213 (281)
T ss_pred HHHHHHHHHHhCceEEEEecccccH-HHHHHHHHHHhccccc-CccCeEEEccEEeccHHHhhhhhh
Confidence 3788999999999999999999863 233444322 122 479988889998888877776543
No 187
>TIGR02681 phage_pRha phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein.
Probab=52.54 E-value=11 Score=25.80 Aligned_cols=26 Identities=15% Similarity=0.291 Sum_probs=21.3
Q ss_pred ccEEE-eCCccccchHHHHHHHHhhCC
Q 027575 55 IPVLV-HGEKPVCDSMVILEYIEEMWP 80 (221)
Q Consensus 55 vP~L~-~~~~~i~es~~I~~yL~~~~~ 80 (221)
+|.+. .||.++++|..|+++++..+.
T Consensus 2 ~~~v~~~~~~~~ttS~~IAe~fgK~H~ 28 (108)
T TIGR02681 2 FPKVFTKRNQVVTDSLTMAQMFGKRHD 28 (108)
T ss_pred CceEEEECCEEEEeHHHHHHHHCcchH
Confidence 35545 599999999999999999864
No 188
>PRK09381 trxA thioredoxin; Provisional
Probab=51.44 E-value=69 Score=21.21 Aligned_cols=58 Identities=10% Similarity=-0.032 Sum_probs=33.1
Q ss_pred eEEeccCCChhHHHHHHHHH----hhCCCceEEEccccCccCchHHHhhCCCCCcccEEEe--CCccc
Q 027575 4 VKLLGTLPSPFVYRVIWALK----LKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH--GEKPV 65 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~----~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~--~~~~i 65 (221)
+..++.++||.|+...=.+. ..+-.+....++.. ....-..+.+. ..+|+++. +|..+
T Consensus 25 vv~f~~~~C~~C~~~~p~~~~l~~~~~~~~~~~~vd~~--~~~~~~~~~~v--~~~Pt~~~~~~G~~~ 88 (109)
T PRK09381 25 LVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID--QNPGTAPKYGI--RGIPTLLLFKNGEVA 88 (109)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHhCCCcEEEEEECC--CChhHHHhCCC--CcCCEEEEEeCCeEE
Confidence 45677889999997653332 22223555666654 32332334455 47998874 66543
No 189
>cd02951 SoxW SoxW family; SoxW is a bacterial periplasmic TRX, containing a redox active CXXC motif, encoded by a genetic locus (sox operon) involved in thiosulfate oxidation. Sulfur bacteria oxidize sulfur compounds to provide reducing equivalents for carbon dioxide fixation during autotrophic growth and the respiratory electron transport chain. It is unclear what the role of SoxW is, since it has been found to be dispensable in the oxidation of thiosulfate to sulfate. SoxW is specifically kept in the reduced state by SoxV, which is essential in thiosulfate oxidation.
Probab=51.19 E-value=58 Score=22.30 Aligned_cols=16 Identities=13% Similarity=0.305 Sum_probs=13.1
Q ss_pred eEEeccCCChhHHHHH
Q 027575 4 VKLLGTLPSPFVYRVI 19 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~ 19 (221)
+..|+.++|++|++..
T Consensus 18 lv~f~a~wC~~C~~~~ 33 (125)
T cd02951 18 LLLFSQPGCPYCDKLK 33 (125)
T ss_pred EEEEeCCCCHHHHHHH
Confidence 4577889999999875
No 190
>PTZ00051 thioredoxin; Provisional
Probab=50.74 E-value=66 Score=20.72 Aligned_cols=57 Identities=12% Similarity=-0.035 Sum_probs=31.9
Q ss_pred eEEeccCCChhHHHHHHHHHhh---CCCceEEEccccCccCchHHHhhCCCCCcccEEEe--CCcc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLK---GVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH--GEKP 64 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~---gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~--~~~~ 64 (221)
+..|+.++|+.|+...-.+... ...+....++.. . ...+.+.... ..+|+++. +|..
T Consensus 22 li~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~vd~~--~-~~~~~~~~~v-~~~Pt~~~~~~g~~ 83 (98)
T PTZ00051 22 IVDFYAEWCGPCKRIAPFYEECSKEYTKMVFVKVDVD--E-LSEVAEKENI-TSMPTFKVFKNGSV 83 (98)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHcCCcEEEEEECc--c-hHHHHHHCCC-ceeeEEEEEeCCeE
Confidence 4577889999999775554432 222444455543 2 2334433332 46898884 5544
No 191
>PF01323 DSBA: DSBA-like thioredoxin domain; InterPro: IPR001853 DSBA is a sub-family of the Thioredoxin family []. The efficient and correct folding of bacterial disulphide bonded proteins in vivo is dependent upon a class of periplasmic oxidoreductase proteins called DsbA, after the Escherichia coli enzyme. The bacterial protein-folding factor DsbA is the most oxidizing of the thioredoxin family. DsbA catalyses disulphide-bond formation during the folding of secreted proteins. The extremely oxidizing nature of DsbA has been proposed to result from either domain motion or stabilising active-site interactions in the reduced form. DsbA's highly oxidizing nature is a result of hydrogen bond, electrostatic and helix-dipole interactions that favour the thiolate over the disulphide at the active site []. In the pathogenic bacterium Vibrio cholerae, the DsbA homologue (TcpG) is responsible for the folding, maturation and secretion of virulence factors. While the overall architecture of TcpG and DsbA is similar and the surface features are retained in TcpG, there are significant differences. For example, the kinked active site helix results from a three-residue loop in DsbA, but is caused by a proline in TcpG (making TcpG more similar to thioredoxin in this respect). Furthermore, the proposed peptide binding groove of TcpG is substantially shortened compared with that of DsbA due to a six-residue deletion. Also, the hydrophobic pocket of TcpG is more shallow and the acidic patch is much less extensive than that of E. coli DsbA [].; GO: 0015035 protein disulfide oxidoreductase activity; PDB: 3GL5_A 3DKS_D 3RPP_C 3RPN_B 1YZX_A 3L9V_C 2IMD_A 2IME_A 2IMF_A 2B3S_B ....
Probab=50.59 E-value=27 Score=25.94 Aligned_cols=35 Identities=11% Similarity=0.090 Sum_probs=25.8
Q ss_pred ceEEeccCCChhHHH----HHHHHHhh-CCCceEEEcccc
Q 027575 3 EVKLLGTLPSPFVYR----VIWALKLK-GVPFEFVEEDVF 37 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~----~~~~l~~~-gi~~~~~~v~~~ 37 (221)
++++|+...||||.. ++-++... ++.++..++.+.
T Consensus 1 ~i~~~~D~~Cp~cy~~~~~l~~l~~~~~~~~i~~~p~~l~ 40 (193)
T PF01323_consen 1 TIEFFFDFICPWCYLASPRLRKLRAEYPDVEIEWRPFPLR 40 (193)
T ss_dssp EEEEEEBTTBHHHHHHHHHHHHHHHHHTTCEEEEEEESSS
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHhcCCcEEEeccccc
Confidence 478999999999885 34455555 788887777664
No 192
>COG3019 Predicted metal-binding protein [General function prediction only]
Probab=50.20 E-value=29 Score=25.02 Aligned_cols=72 Identities=18% Similarity=0.099 Sum_probs=48.8
Q ss_pred ceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhh-C-C-CCCcccEEEeCCcccc---chHHHHHHHH
Q 027575 3 EVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKY-N-P-VHKKIPVLVHGEKPVC---DSMVILEYIE 76 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~-~-p-~~g~vP~L~~~~~~i~---es~~I~~yL~ 76 (221)
+|..|..|.|..|..-.-.|+.+|..+..+..+.. ..+++. + | ....==+.++||..+- -..+|.+.|+
T Consensus 27 ~~~vyksPnCGCC~~w~~~mk~~Gf~Vk~~~~~d~-----~alK~~~gIp~e~~SCHT~VI~Gy~vEGHVPa~aI~~ll~ 101 (149)
T COG3019 27 EMVVYKSPNCGCCDEWAQHMKANGFEVKVVETDDF-----LALKRRLGIPYEMQSCHTAVINGYYVEGHVPAEAIARLLA 101 (149)
T ss_pred eEEEEeCCCCccHHHHHHHHHhCCcEEEEeecCcH-----HHHHHhcCCChhhccccEEEEcCEEEeccCCHHHHHHHHh
Confidence 58899999999999999999999998888776543 222221 1 0 0011225566776542 3678999998
Q ss_pred hhC
Q 027575 77 EMW 79 (221)
Q Consensus 77 ~~~ 79 (221)
+..
T Consensus 102 ~~p 104 (149)
T COG3019 102 EKP 104 (149)
T ss_pred CCC
Confidence 876
No 193
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=46.89 E-value=83 Score=24.16 Aligned_cols=54 Identities=13% Similarity=0.102 Sum_probs=31.7
Q ss_pred ceEEecc---CCChhHHHHHHHHHhh-----CCCceEEEccccCccCchHHHhhCCCCCcccEEEe
Q 027575 3 EVKLLGT---LPSPFVYRVIWALKLK-----GVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH 60 (221)
Q Consensus 3 ~~~Ly~~---~~sp~~~~~~~~l~~~-----gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~ 60 (221)
++.+|+. ++||.|+.+.=.+... ++.+..+.++.. . .+++.+..-. ..+|++..
T Consensus 22 ~i~~f~~~~a~wC~~C~~~~p~l~~la~~~~~~~i~~v~vd~~--~-~~~l~~~~~V-~~~Pt~~~ 83 (215)
T TIGR02187 22 EIVVFTDNDKEGCQYCKETEQLLEELSEVSPKLKLEIYDFDTP--E-DKEEAEKYGV-ERVPTTII 83 (215)
T ss_pred EEEEEcCCCCCCCCchHHHHHHHHHHHhhCCCceEEEEecCCc--c-cHHHHHHcCC-CccCEEEE
Confidence 4667877 8999999776666444 233334444432 2 3344433333 47999985
No 194
>cd02962 TMX2 TMX2 family; composed of proteins similar to human TMX2, a 372-amino acid TRX-related transmembrane protein, identified and characterized through the cloning of its cDNA from a human fetal library. It contains a TRX domain but the redox active CXXC motif is replaced with SXXC. Sequence analysis predicts that TMX2 may be a Type I membrane protein, with its C-terminal half protruding on the luminal side of the endoplasmic reticulum (ER). In addition to the TRX domain, transmembrane region and ER-retention signal, TMX2 also contains a Myb DNA-binding domain repeat signature and a dileucine motif in the tail.
Probab=43.50 E-value=1.2e+02 Score=22.11 Aligned_cols=60 Identities=17% Similarity=0.142 Sum_probs=33.9
Q ss_pred eEEeccCCChhHHHHHHHHHh-----hCCCceEEEccccCccCchHHHh-hCCCC----CcccEEEe--CCcccc
Q 027575 4 VKLLGTLPSPFVYRVIWALKL-----KGVPFEFVEEDVFSNEKSALLLK-YNPVH----KKIPVLVH--GEKPVC 66 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~-----~gi~~~~~~v~~~~~~~~~~~~~-~~p~~----g~vP~L~~--~~~~i~ 66 (221)
+..|+.++||.|+...-.+.. .+-.++...||.. . .+++.+ .+-.. +++|+++. +|..+.
T Consensus 51 vV~Fya~wC~~Ck~l~p~l~~la~~~~~~~v~f~~VDvd--~-~~~la~~~~V~~~~~v~~~PT~ilf~~Gk~v~ 122 (152)
T cd02962 51 LVEFFTTWSPECVNFAPVFAELSLKYNNNNLKFGKIDIG--R-FPNVAEKFRVSTSPLSKQLPTIILFQGGKEVA 122 (152)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHcccCCeEEEEEECC--C-CHHHHHHcCceecCCcCCCCEEEEEECCEEEE
Confidence 457788899999876544432 2233556666664 2 233332 33220 23899883 776554
No 195
>COG5494 Predicted thioredoxin/glutaredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=42.92 E-value=64 Score=25.05 Aligned_cols=69 Identities=17% Similarity=0.086 Sum_probs=45.3
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccc----cchHHHHHHHH
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPV----CDSMVILEYIE 76 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i----~es~~I~~yL~ 76 (221)
+++|.+.+|.-|....=.|+.+|+-=....++.. .....+.+..- -.+|.+..||..+ .|-..|-.-+.
T Consensus 13 VkI~~HktC~ssy~Lf~~L~nkgll~~Vkii~a~--~p~f~~~~~~V--~SvP~Vf~DGel~~~dpVdp~~ies~~~ 85 (265)
T COG5494 13 VKIFTHKTCVSSYMLFEYLENKGLLGKVKIIDAE--LPPFLAFEKGV--ISVPSVFIDGELVYADPVDPEEIESILS 85 (265)
T ss_pred EEEEEecchHHHHHHHHHHHhcCCCCCceEEEcC--CChHHHhhcce--eecceEEEcCeEEEcCCCCHHHHHHHHc
Confidence 7899999999999999999999986666666543 22222222222 3689988877553 34444544443
No 196
>cd03003 PDI_a_ERdj5_N PDIa family, N-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains. This subfamily is comprised of the first TRX domain of ERdj5 located after the DnaJ domain at the N-terminal half of the protein. ERdj5 is a ubiquitous protein localized in the endoplasmic reticulum (ER) and is abundant in secretory cells. It's transcription is induced during ER stress. It interacts with BiP through its DnaJ domain in an ATP-dependent manner. BiP, an ER-resident member of the Hsp70 chaperone family, functions in ER-associated degradation and protein translocation.
Probab=41.49 E-value=99 Score=20.12 Aligned_cols=56 Identities=7% Similarity=-0.055 Sum_probs=31.2
Q ss_pred eEEeccCCChhHHHHHHHHHhhCC----CceEEEccccCccCchHHHhhCCCCCcccEEEe--CCc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGV----PFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH--GEK 63 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi----~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~--~~~ 63 (221)
+..|+.++|+.|+...-.+....- .+....++.. . .+.+.+..-. ..+|++.. +|.
T Consensus 22 ~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~vd~~--~-~~~~~~~~~v-~~~Pt~~~~~~g~ 83 (101)
T cd03003 22 FVNFYSPRCSHCHDLAPTWREFAKEMDGVIRIGAVNCG--D-DRMLCRSQGV-NSYPSLYVFPSGM 83 (101)
T ss_pred EEEEECCCChHHHHhHHHHHHHHHHhcCceEEEEEeCC--c-cHHHHHHcCC-CccCEEEEEcCCC
Confidence 456788999999976554433222 2444555554 2 2333333232 47899874 554
No 197
>PF06110 DUF953: Eukaryotic protein of unknown function (DUF953); InterPro: IPR010357 This family consists of several hypothetical eukaryotic proteins of unknown function that are thioredoxin-like.; PDB: 1V9W_A 1WOU_A.
Probab=40.62 E-value=38 Score=23.68 Aligned_cols=59 Identities=17% Similarity=0.147 Sum_probs=26.8
Q ss_pred ccCCChhHHHHHHHHHhh--CC--CceEEEccccCccCchHHHh-hCCCC-------CcccEEEe--CCccccchH
Q 027575 8 GTLPSPFVYRVIWALKLK--GV--PFEFVEEDVFSNEKSALLLK-YNPVH-------KKIPVLVH--GEKPVCDSM 69 (221)
Q Consensus 8 ~~~~sp~~~~~~~~l~~~--gi--~~~~~~v~~~~~~~~~~~~~-~~p~~-------g~vP~L~~--~~~~i~es~ 69 (221)
+.++||.|.++.-.+... +. ....+.|... .. +.++. .||+. ..||+|+. ++..+.|..
T Consensus 34 g~sWCPDC~~aep~v~~~f~~~~~~~~lv~v~VG--~r-~~Wkdp~n~fR~~p~~~l~~IPTLi~~~~~~rL~e~e 106 (119)
T PF06110_consen 34 GQSWCPDCVAAEPVVEKAFKKAPENARLVYVEVG--DR-PEWKDPNNPFRTDPDLKLKGIPTLIRWETGERLVEEE 106 (119)
T ss_dssp S-BSSHHHHHHHHHHHHHHHH-STTEEEEEEE-----H-HHHC-TTSHHHH--CC---SSSEEEECTSS-EEEHHH
T ss_pred CCcccHHHHHHHHHHHHHHHhCCCCceEEEEEcC--CH-HHhCCCCCCceEcceeeeeecceEEEECCCCccchhh
Confidence 347899999876444332 22 3444444442 21 22221 12220 35999994 444555543
No 198
>PRK09266 hypothetical protein; Provisional
Probab=40.08 E-value=45 Score=26.62 Aligned_cols=58 Identities=16% Similarity=0.179 Sum_probs=39.4
Q ss_pred HHHhhCCCceEEEccccC-ccCchHHHhhCCCCCcccEEEeCCccccchHHHHHHHHhhC
Q 027575 21 ALKLKGVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLVHGEKPVCDSMVILEYIEEMW 79 (221)
Q Consensus 21 ~l~~~gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~~I~~yL~~~~ 79 (221)
.+...|+++++..+++.. ....+.|. .|-..|-+||-..|+..+.+...|.+.|.+.|
T Consensus 200 ~~~~~g~~v~e~~i~~~eL~~adevfl-tnSl~gi~pV~~i~~~~~~~~~~~~~~l~~~~ 258 (266)
T PRK09266 200 GLERLGIPQRTRPVTLADLGRFAGAFA-CNAWRGQRAVSAIDDVALPDSHALLELLRRAY 258 (266)
T ss_pred HHHHcCCeeEEEECCHHHHHHhhHhhh-hcCccceEEEEEECCEECCCCchHHHHHHHHH
Confidence 345559999999888753 22233344 44433899999998887765567888777665
No 199
>PF13728 TraF: F plasmid transfer operon protein
Probab=39.90 E-value=98 Score=23.98 Aligned_cols=54 Identities=13% Similarity=0.027 Sum_probs=34.8
Q ss_pred eEEeccCCChhHHH----HHHHHHhhCCCceEEEccccC-cc-----CchH-HHhhCCCCCcccEEE
Q 027575 4 VKLLGTLPSPFVYR----VIWALKLKGVPFEFVEEDVFS-NE-----KSAL-LLKYNPVHKKIPVLV 59 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~----~~~~l~~~gi~~~~~~v~~~~-~~-----~~~~-~~~~~p~~g~vP~L~ 59 (221)
+.+++.+.||||+. ++.+....|+++..+.+|... .. .... ....+. ..+|++.
T Consensus 124 L~~F~~~~C~~C~~~~pil~~~~~~yg~~v~~vs~DG~~~~~fp~~~~~~g~~~~l~v--~~~Pal~ 188 (215)
T PF13728_consen 124 LFFFYRSDCPYCQQQAPILQQFADKYGFSVIPVSLDGRPIPSFPNPRPDPGQAKRLGV--KVTPALF 188 (215)
T ss_pred EEEEEcCCCchhHHHHHHHHHHHHHhCCEEEEEecCCCCCcCCCCCCCCHHHHHHcCC--CcCCEEE
Confidence 56778889999975 666667778888877776421 11 1122 224455 3789888
No 200
>cd03020 DsbA_DsbC_DsbG DsbA family, DsbC and DsbG subfamily; V-shaped homodimeric proteins containing a redox active CXXC motif imbedded in a TRX fold. They function as protein disulfide isomerases and chaperones in the bacterial periplasm to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins. DsbC and DsbG are kept in their reduced state by the cytoplasmic membrane protein DsbD, which utilizes the TRX/TRX reductase system in the cytosol as a source of reducing equivalents. DsbG differ from DsbC in that it has a more limited substrate specificity, and it may preferentially act later in the folding process to catalyze disulfide rearrangements in folded or partially folded proteins. Also included in the alignment is the predicted protein TrbB, whose gene was sequenced from the enterohemorrhagic E. coli type IV pilus gene cluster, which is required for efficient plasmid transfer.
Probab=38.84 E-value=39 Score=25.51 Aligned_cols=22 Identities=18% Similarity=0.203 Sum_probs=18.2
Q ss_pred ceEEeccCCChhHHHHHHHHHh
Q 027575 3 EVKLLGTLPSPFVYRVIWALKL 24 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~ 24 (221)
.+.+|+.+.||||++..-.+..
T Consensus 80 ~i~~f~D~~Cp~C~~~~~~l~~ 101 (197)
T cd03020 80 VVYVFTDPDCPYCRKLEKELKP 101 (197)
T ss_pred EEEEEECCCCccHHHHHHHHhh
Confidence 3678889999999999877764
No 201
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=38.64 E-value=1.2e+02 Score=21.29 Aligned_cols=68 Identities=19% Similarity=0.101 Sum_probs=39.8
Q ss_pred cCCChhHHHH----HHHHHhhCCCceEEEccccCccCchHHHhhCCCC------CcccEEEe-C--CccccchHHHHHHH
Q 027575 9 TLPSPFVYRV----IWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVH------KKIPVLVH-G--EKPVCDSMVILEYI 75 (221)
Q Consensus 9 ~~~sp~~~~~----~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~------g~vP~L~~-~--~~~i~es~~I~~yL 75 (221)
-++||.|.++ .=++.+.+-+...+.|+.. +.+-|--.-|||. .-||+|.. + ...+.+...--..|
T Consensus 42 qSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG--~rp~Wk~p~n~FR~d~~~lt~vPTLlrw~~~~~rL~~~q~~~~~L 119 (128)
T KOG3425|consen 42 QSWCPDCVAAEPVINEALKHAPEDVHFVHVYVG--NRPYWKDPANPFRKDPGILTAVPTLLRWKRQPQRLDGLQCLNDHL 119 (128)
T ss_pred CcCCchHHHhhHHHHHHHHhCCCceEEEEEEec--CCCcccCCCCccccCCCceeecceeeEEcCccccchHhHhhHHHH
Confidence 4689998874 4455656666666666654 3333322334431 24888884 4 34566666666677
Q ss_pred Hhh
Q 027575 76 EEM 78 (221)
Q Consensus 76 ~~~ 78 (221)
.+.
T Consensus 120 ve~ 122 (128)
T KOG3425|consen 120 VEM 122 (128)
T ss_pred HHH
Confidence 665
No 202
>PF13098 Thioredoxin_2: Thioredoxin-like domain; PDB: 1T3B_A 2L57_A 1EEJ_B 1TJD_A 1JZD_B 1JZO_A 1G0T_B 3GV1_A 1V58_A 2H0H_A ....
Probab=38.42 E-value=36 Score=22.69 Aligned_cols=34 Identities=12% Similarity=0.047 Sum_probs=20.1
Q ss_pred eEEeccCCChhHHHHHHHHHh-------hCCCceEEEcccc
Q 027575 4 VKLLGTLPSPFVYRVIWALKL-------KGVPFEFVEEDVF 37 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~-------~gi~~~~~~v~~~ 37 (221)
+.+|+.++||||++..-.+.. ..-.+..+.++..
T Consensus 9 v~~F~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 (112)
T PF13098_consen 9 VVVFTDPWCPYCKKLEKELFPDNDVARYLKDDFQVIFVNID 49 (112)
T ss_dssp EEEEE-TT-HHHHHHHHHHHHHHHHHCEEHCECEEEECESH
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecC
Confidence 567788999999987555542 1114555666554
No 203
>PRK10996 thioredoxin 2; Provisional
Probab=37.61 E-value=1.5e+02 Score=20.99 Aligned_cols=58 Identities=12% Similarity=0.052 Sum_probs=33.5
Q ss_pred eEEeccCCChhHHHHHHHHHh----hCCCceEEEccccCccCchHHHhhCCCCCcccEEEe--CCccc
Q 027575 4 VKLLGTLPSPFVYRVIWALKL----KGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH--GEKPV 65 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~----~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~--~~~~i 65 (221)
+..|+.++|+.|+...-.+.. .+-.+....+|.. ...+-..+.+- ..+|+++. +|..+
T Consensus 56 vv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~--~~~~l~~~~~V--~~~Ptlii~~~G~~v 119 (139)
T PRK10996 56 VIDFWAPWCGPCRNFAPIFEDVAAERSGKVRFVKVNTE--AERELSARFRI--RSIPTIMIFKNGQVV 119 (139)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEeCC--CCHHHHHhcCC--CccCEEEEEECCEEE
Confidence 456788999999975444332 2324555556654 33333334454 46999884 66543
No 204
>PF04134 DUF393: Protein of unknown function, DUF393; InterPro: IPR007263 The DCC family, named after the conserved N-terminal DxxCxxC motif, encompasses COG3011 from COG. Proteins in this family are predicted to have a thioredoxin-like fold which, together with the presence of an invariant catalytic cysteine residue, suggests that they are a novel group of thiol-disulphide oxidoreductases []. As some of the bacterial proteins are encoded near penicillin-binding proteins, it has been suggested that these may be involved in redox regulation of cell wall biosynthesis [].
Probab=35.19 E-value=1.4e+02 Score=20.03 Aligned_cols=70 Identities=13% Similarity=0.133 Sum_probs=40.4
Q ss_pred EeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchH-H--Hhh---CCCCCcccEEEeCCc-cccchHHHHHHHHhh
Q 027575 6 LLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSAL-L--LKY---NPVHKKIPVLVHGEK-PVCDSMVILEYIEEM 78 (221)
Q Consensus 6 Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~-~--~~~---~p~~g~vP~L~~~~~-~i~es~~I~~yL~~~ 78 (221)
|++-..||+|.+..-.+......-....++... ....+ + ..+ +.. ..+-+ ..+|. .+.++.|+.+-+...
T Consensus 1 v~YDg~C~lC~~~~~~l~~~d~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~-~~l~~-~~~g~~~~~G~~A~~~l~~~~ 77 (114)
T PF04134_consen 1 VFYDGDCPLCRREVRFLRRRDRGGRLRFVDIQS-EPDQALLASYGISPEDAD-SRLHL-IDDGERVYRGSDAVLRLLRRL 77 (114)
T ss_pred CEECCCCHhHHHHHHHHHhcCCCCCEEEEECCC-hhhhhHHHhcCcCHHHHc-CeeEE-ecCCCEEEEcHHHHHHHHHHc
Confidence 466778999998877777775533344444421 11111 1 111 122 23333 45665 899999999887665
No 205
>PRK11657 dsbG disulfide isomerase/thiol-disulfide oxidase; Provisional
Probab=34.78 E-value=55 Score=26.04 Aligned_cols=20 Identities=10% Similarity=0.193 Sum_probs=16.4
Q ss_pred eEEeccCCChhHHHHHHHHH
Q 027575 4 VKLLGTLPSPFVYRVIWALK 23 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~ 23 (221)
+.+|+-+.||||++..--+.
T Consensus 121 I~vFtDp~CpyC~kl~~~l~ 140 (251)
T PRK11657 121 VYVFADPNCPYCKQFWQQAR 140 (251)
T ss_pred EEEEECCCChhHHHHHHHHH
Confidence 66788999999999876654
No 206
>cd02954 DIM1 Dim1 family; Dim1 is also referred to as U5 small nuclear ribonucleoprotein particle (snRNP)-specific 15kD protein. It is a component of U5 snRNP, which pre-assembles with U4/U6 snRNPs to form a [U4/U6:U5] tri-snRNP complex required for pre-mRNA splicing. Dim1 interacts with multiple splicing-associated proteins, suggesting that it functions at multiple control points in the splicing of pre-mRNA as part of a large spliceosomal complex involving many protein-protein interactions. U5 snRNP contains seven core proteins (common to all snRNPs) and nine U5-specific proteins, one of which is Dim1. Dim1 adopts a thioredoxin fold but does not contain the redox active CXXC motif. It is essential for G2/M phase transition, as a consequence to its role in pre-mRNA splicing.
Probab=34.71 E-value=1.5e+02 Score=20.41 Aligned_cols=57 Identities=14% Similarity=0.008 Sum_probs=33.0
Q ss_pred EEeccCCChhHHHHHHHHHhhCCC----ceEEEccccCccCchHHHhhCCCCCcccEEEe--CCccc
Q 027575 5 KLLGTLPSPFVYRVIWALKLKGVP----FEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH--GEKPV 65 (221)
Q Consensus 5 ~Ly~~~~sp~~~~~~~~l~~~gi~----~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~--~~~~i 65 (221)
.-|+.++||-|+.+.=.+...--. .....||.+ . .+++.+..-. ..+|++.. +|..+
T Consensus 19 V~F~A~WCgpCk~m~P~le~la~~~~~~v~f~kVDvD--~-~~~la~~~~V-~~iPTf~~fk~G~~v 81 (114)
T cd02954 19 IRFGRDWDPVCMQMDEVLAKIAEDVSNFAVIYLVDID--E-VPDFNKMYEL-YDPPTVMFFFRNKHM 81 (114)
T ss_pred EEEECCCChhHHHHHHHHHHHHHHccCceEEEEEECC--C-CHHHHHHcCC-CCCCEEEEEECCEEE
Confidence 347788999999775555333211 344556653 3 3455544333 46999984 76554
No 207
>cd02993 PDI_a_APS_reductase PDIa family, 5'-Adenylylsulfate (APS) reductase subfamily; composed of plant-type APS reductases containing a C-terminal redox active TRX domain and an N-terminal reductase domain which is part of a superfamily that includes N type ATP PPases. APS reductase catalyzes the reduction of activated sulfate to sulfite, a key step in the biosynthesis of sulfur-containing metabolites. Sulfate is first activated by ATP sulfurylase, forming APS, which can be phosphorylated to 3'-phosphoadenosine-5'-phosphosulfate (PAPS). Depending on the organism, either APS or PAPS can be used for sulfate reduction. Prokaryotes and fungi use PAPS, whereas plants use both APS and PAPS. Since plant-type APS reductase uses glutathione (GSH) as its electron donor, the C-terminal domain may function like glutaredoxin, a GSH-dependent member of the TRX superfamily. The flow of reducing equivalents goes from GSH - C-terminal TRX domain - N-terminal reductase domain - APS. Plant-type APS red
Probab=34.50 E-value=1.4e+02 Score=19.85 Aligned_cols=53 Identities=13% Similarity=0.138 Sum_probs=30.1
Q ss_pred eEEeccCCChhHHHHHHHHH-----hhCCCceEEEccccCccCchHHH-hhCCCCCcccEEE
Q 027575 4 VKLLGTLPSPFVYRVIWALK-----LKGVPFEFVEEDVFSNEKSALLL-KYNPVHKKIPVLV 59 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~-----~~gi~~~~~~v~~~~~~~~~~~~-~~~p~~g~vP~L~ 59 (221)
+..|+.++||.|+...-.+. +.+..+....++.. .....+. +.... ..+|++.
T Consensus 25 lv~f~a~wC~~C~~~~~~~~~la~~~~~~~~~~~~vd~d--~~~~~~~~~~~~v-~~~Pti~ 83 (109)
T cd02993 25 LVVLYAPWCPFCQAMEASYEELAEKLAGSNVKVAKFNAD--GEQREFAKEELQL-KSFPTIL 83 (109)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECC--ccchhhHHhhcCC-CcCCEEE
Confidence 56788999999997654332 23334555555553 2122332 22333 4689887
No 208
>PHA02278 thioredoxin-like protein
Probab=34.21 E-value=1.4e+02 Score=19.92 Aligned_cols=60 Identities=7% Similarity=0.041 Sum_probs=31.6
Q ss_pred eEEeccCCChhHHHHHHHHHhh----CCCceEEEccccC-ccCchHHH-hhCCCCCcccEEEe--CCccc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLK----GVPFEFVEEDVFS-NEKSALLL-KYNPVHKKIPVLVH--GEKPV 65 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~----gi~~~~~~v~~~~-~~~~~~~~-~~~p~~g~vP~L~~--~~~~i 65 (221)
+.-|+.++|+.|+.+.=.+... ........++... +...+++. +.+- ..+|++.. ||..+
T Consensus 18 vV~F~A~WCgpCk~m~p~l~~l~~~~~~~~~~~~vdvd~~~~d~~~l~~~~~I--~~iPT~i~fk~G~~v 85 (103)
T PHA02278 18 IVMITQDNCGKCEILKSVIPMFQESGDIKKPILTLNLDAEDVDREKAVKLFDI--MSTPVLIGYKDGQLV 85 (103)
T ss_pred EEEEECCCCHHHHhHHHHHHHHHhhhcCCceEEEEECCccccccHHHHHHCCC--ccccEEEEEECCEEE
Confidence 3456778999999766444322 2222334444431 01123444 3444 46999984 77554
No 209
>cd02955 SSP411 TRX domain, SSP411 protein family; members of this family are highly conserved proteins present in eukaryotes, bacteria and archaea, about 600-800 amino acids in length, which contain a TRX domain with a redox active CXXC motif. The human/rat protein, called SSP411, is specifically expressed in the testis in an age-dependent manner. The SSP411 mRNA is increased during spermiogenesis and is localized in round and elongated spermatids, suggesting a function in fertility regulation.
Probab=32.23 E-value=1.8e+02 Score=20.34 Aligned_cols=62 Identities=11% Similarity=0.110 Sum_probs=35.1
Q ss_pred EEeccCCChhHHHHHH-HH------HhhCCCceEEEccccC-ccCchHHHh-----hCCCCCcccEEEe---CCccccch
Q 027575 5 KLLGTLPSPFVYRVIW-AL------KLKGVPFEFVEEDVFS-NEKSALLLK-----YNPVHKKIPVLVH---GEKPVCDS 68 (221)
Q Consensus 5 ~Ly~~~~sp~~~~~~~-~l------~~~gi~~~~~~v~~~~-~~~~~~~~~-----~~p~~g~vP~L~~---~~~~i~es 68 (221)
..++..+|++|++..- .+ ....-.|..+.+|... ......+.+ .+. +-+|+++. +|..+..+
T Consensus 20 l~f~a~WC~~Ck~me~~~f~~~~V~~~l~~~fv~VkvD~~~~~~~~~~~~~~~~~~~~~--~G~Pt~vfl~~~G~~~~~~ 97 (124)
T cd02955 20 LSIGYSTCHWCHVMEHESFEDEEVAAILNENFVPIKVDREERPDVDKIYMNAAQAMTGQ--GGWPLNVFLTPDLKPFFGG 97 (124)
T ss_pred EEEccCCCHhHHHHHHHccCCHHHHHHHhCCEEEEEEeCCcCcHHHHHHHHHHHHhcCC--CCCCEEEEECCCCCEEeee
Confidence 4467889999997742 22 2223368888888752 111111211 133 34888883 67777654
No 210
>cd02994 PDI_a_TMX PDIa family, TMX subfamily; composed of proteins similar to the TRX-related human transmembrane protein, TMX. TMX is a type I integral membrane protein; the N-terminal redox active TRX domain is present in the endoplasmic reticulum (ER) lumen while the C-terminus is oriented towards the cytoplasm. It is expressed in many cell types and its active site motif (CPAC) is unique. In vitro, TMX reduces interchain disulfides of insulin and renatures inactive RNase containing incorrect disulfide bonds. The C. elegans homolog, DPY-11, is expressed only in the hypodermis and resides in the cytoplasm. It is required for body and sensory organ morphogeneis. Another uncharacterized TRX-related transmembrane protein, human TMX4, is included in the alignment. The active site sequence of TMX4 is CPSC.
Probab=32.18 E-value=1.4e+02 Score=19.24 Aligned_cols=53 Identities=13% Similarity=0.010 Sum_probs=29.9
Q ss_pred eEEeccCCChhHHHHHHHHHhh-----CCCceEEEccccCccCchHHHhhCCCCCcccEEEe
Q 027575 4 VKLLGTLPSPFVYRVIWALKLK-----GVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH 60 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~-----gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~ 60 (221)
+..|+.++|+.|+...=.+... +..+....+|.. . .+.+.+.... ..+|++..
T Consensus 20 lv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~--~-~~~~~~~~~i-~~~Pt~~~ 77 (101)
T cd02994 20 MIEFYAPWCPACQQLQPEWEEFADWSDDLGINVAKVDVT--Q-EPGLSGRFFV-TALPTIYH 77 (101)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHhhccCCeEEEEEEcc--C-CHhHHHHcCC-cccCEEEE
Confidence 4567889999998755443322 334555555543 2 2334333233 46899884
No 211
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=32.13 E-value=71 Score=25.05 Aligned_cols=22 Identities=5% Similarity=0.125 Sum_probs=17.6
Q ss_pred ceEEeccCCChhHHHHHHHHHh
Q 027575 3 EVKLLGTLPSPFVYRVIWALKL 24 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~~~~l~~ 24 (221)
.+.+|+-+.||||++..--+..
T Consensus 110 ~I~vFtDp~CpyCkkl~~~l~~ 131 (232)
T PRK10877 110 VITVFTDITCGYCHKLHEQMKD 131 (232)
T ss_pred EEEEEECCCChHHHHHHHHHHH
Confidence 3678899999999998766654
No 212
>cd03021 DsbA_GSTK DsbA family, Glutathione (GSH) S-transferase Kappa (GSTK) subfamily; GSTK is a member of the GST family of enzymes which catalyzes the transfer of the thiol of GSH to electrophilic substrates. It is specifically located in the mitochondria and peroxisomes, unlike other members of the canonical GST family, which are mainly cytosolic. The biological substrates of GSTK are not yet known. It is presumed to have a protective role during respiration when large amounts of reactive oxygen species are generated. GSTK has the same general fold as DsbA, consisting of a thioredoxin domain interrupted by an alpha-helical domain and its biological unit is a homodimer. GSTK is closely related to the bacterial enzyme, 2-hydroxychromene-2-carboxylate (HCCA) isomerase. It shows little sequence similarity to the other members of the GST family.
Probab=31.87 E-value=73 Score=24.31 Aligned_cols=34 Identities=18% Similarity=0.212 Sum_probs=22.8
Q ss_pred ceEEeccCCChhHHHH----HHHHHhhCCCceEEEccc
Q 027575 3 EVKLLGTLPSPFVYRV----IWALKLKGVPFEFVEEDV 36 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~~----~~~l~~~gi~~~~~~v~~ 36 (221)
++.+|+...||||... .-++...+++++.+++.+
T Consensus 2 ~Id~~~D~vcPwcylg~~~l~~~~~~~~v~i~~~P~~L 39 (209)
T cd03021 2 KIELYYDVVSPYSYLAFEVLCRYQTAWNVDITYVPVFL 39 (209)
T ss_pred ceEEEEeCCChHHHHHHHHHHHHHHHhCCeEEEEeeeh
Confidence 4789999999998854 333445566666555543
No 213
>cd02957 Phd_like Phosducin (Phd)-like family; composed of Phd and Phd-like proteins (PhLP), characterized as cytosolic regulators of G protein functions. Phd and PhLPs specifically bind G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane and impeding G protein-mediated signal transduction by inhibiting the formation of a functional G protein trimer (G protein alphabetagamma). Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-te
Probab=31.49 E-value=1.3e+02 Score=20.13 Aligned_cols=59 Identities=17% Similarity=0.140 Sum_probs=32.7
Q ss_pred eEEeccCCChhHHHHHHHHHhhCC---CceEEEccccCccCchHHHhhCCCCCcccEEEe--CCccccc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGV---PFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH--GEKPVCD 67 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi---~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~--~~~~i~e 67 (221)
+..|+.++|+.|+.+.-.++..-- ......+|.. .. .+.+..-. ..+|+++. +|..+..
T Consensus 28 vv~F~a~~c~~C~~l~~~l~~la~~~~~v~f~~vd~~--~~--~l~~~~~i-~~~Pt~~~f~~G~~v~~ 91 (113)
T cd02957 28 VVHFYEPGFPRCKILDSHLEELAAKYPETKFVKINAE--KA--FLVNYLDI-KVLPTLLVYKNGELIDN 91 (113)
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHHCCCcEEEEEEch--hh--HHHHhcCC-CcCCEEEEEECCEEEEE
Confidence 346788999999876655543211 1233455543 22 44333222 47999884 7765543
No 214
>COG2761 FrnE Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=30.34 E-value=40 Score=26.44 Aligned_cols=15 Identities=20% Similarity=0.625 Sum_probs=12.8
Q ss_pred ceEEeccCCChhHHH
Q 027575 3 EVKLLGTLPSPFVYR 17 (221)
Q Consensus 3 ~~~Ly~~~~sp~~~~ 17 (221)
++.+|+-..||||+.
T Consensus 7 ~I~v~sD~vCPwC~i 21 (225)
T COG2761 7 EIDVFSDVVCPWCYI 21 (225)
T ss_pred EEEEEeCCcCchhhc
Confidence 578899999999984
No 215
>TIGR01068 thioredoxin thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model.
Probab=30.31 E-value=1.5e+02 Score=18.80 Aligned_cols=56 Identities=20% Similarity=0.100 Sum_probs=31.7
Q ss_pred eEEeccCCChhHHHHHHHHHhh----CCCceEEEccccCccCchHHHhhCCCCCcccEEEe--CCc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLK----GVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH--GEK 63 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~----gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~--~~~ 63 (221)
+..++.++|+.|+...-.+... +-.+....++.. ....-..+.+- ..+|++.. +|.
T Consensus 18 vi~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v--~~~P~~~~~~~g~ 79 (101)
T TIGR01068 18 LVDFWAPWCGPCKMIAPILEELAKEYEGKVKFVKLNVD--ENPDIAAKYGI--RSIPTLLLFKNGK 79 (101)
T ss_pred EEEEECCCCHHHHHhCHHHHHHHHHhcCCeEEEEEECC--CCHHHHHHcCC--CcCCEEEEEeCCc
Confidence 3466778999999775444332 223555556553 22223334454 36998884 553
No 216
>cd02956 ybbN ybbN protein family; ybbN is a hypothetical protein containing a redox-inactive TRX-like domain. Its gene has been sequenced from several gammaproteobacteria and actinobacteria.
Probab=30.22 E-value=1.5e+02 Score=18.88 Aligned_cols=57 Identities=14% Similarity=0.081 Sum_probs=32.6
Q ss_pred eEEeccCCChhHHHHHHHHHhh----CCCceEEEccccCccCchHHHhhCCCCCcccEEEe--CCcc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLK----GVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH--GEKP 64 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~----gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~--~~~~ 64 (221)
+..|+.++|+.|+...-.+... +-.+....++.. . ...+.+.-.. ..+|+++. +|..
T Consensus 16 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~--~-~~~l~~~~~i-~~~Pt~~~~~~g~~ 78 (96)
T cd02956 16 VVDFWAPRSPPSKELLPLLERLAEEYQGQFVLAKVNCD--A-QPQIAQQFGV-QALPTVYLFAAGQP 78 (96)
T ss_pred EEEEECCCChHHHHHHHHHHHHHHHhCCcEEEEEEecc--C-CHHHHHHcCC-CCCCEEEEEeCCEE
Confidence 4566788999999775555432 223445556653 2 3344433332 46999983 5543
No 217
>PRK13947 shikimate kinase; Provisional
Probab=30.05 E-value=79 Score=22.91 Aligned_cols=30 Identities=13% Similarity=0.037 Sum_probs=27.4
Q ss_pred CcceEEeccCCChhHHHHHHHHHhhCCCce
Q 027575 1 MAEVKLLGTLPSPFVYRVIWALKLKGVPFE 30 (221)
Q Consensus 1 M~~~~Ly~~~~sp~~~~~~~~l~~~gi~~~ 30 (221)
|.++.|.|.++|+=+...+.+....|++|-
T Consensus 1 m~~I~l~G~~GsGKst~a~~La~~lg~~~i 30 (171)
T PRK13947 1 MKNIVLIGFMGTGKTTVGKRVATTLSFGFI 30 (171)
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHHhCCCEE
Confidence 778999999999999999999999999883
No 218
>cd04911 ACT_AKiii-YclM-BS_1 ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. Bacillus subtilis YclM is reported to be a single polypeptide of 50 kD. AKIII from Bacillus subtilis strain 168 is induced by lysine and repressed by threonine and it is synergistically inhibited by lysine and threonine. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=29.57 E-value=61 Score=20.68 Aligned_cols=26 Identities=15% Similarity=0.299 Sum_probs=22.2
Q ss_pred ChhHHHHHHHHHhhCCCceEEEcccc
Q 027575 12 SPFVYRVIWALKLKGVPFEFVEEDVF 37 (221)
Q Consensus 12 sp~~~~~~~~l~~~gi~~~~~~v~~~ 37 (221)
-+|++|+.-+++..|++|+..+...+
T Consensus 15 vGF~rk~L~I~E~~~is~Eh~PSGID 40 (76)
T cd04911 15 VGFGRKLLSILEDNGISYEHMPSGID 40 (76)
T ss_pred hcHHHHHHHHHHHcCCCEeeecCCCc
Confidence 36999999999999999998876543
No 219
>cd02948 TRX_NDPK TRX domain, TRX and NDP-kinase (NDPK) fusion protein family; most members of this group are fusion proteins which contain one redox active TRX domain containing a CXXC motif and three NDPK domains, and are characterized as intermediate chains (ICs) of axonemal outer arm dynein. Dyneins are molecular motors that generate force against microtubules to produce cellular movement, and are divided into two classes: axonemal and cytoplasmic. They are supramolecular complexes consisting of three protein groups classified according to size: dynein heavy, intermediate and light chains. Axonemal dyneins form two structures, the inner and outer arms, which are attached to doublet microtubules throughout the cilia and flagella. The human homolog is the sperm-specific Sptrx-2, presumed to be a component of the human sperm axoneme architecture. Included in this group is another human protein, TRX-like protein 2, a smaller fusion protein containing one TRX and one NDPK domain, which
Probab=29.50 E-value=1.7e+02 Score=19.20 Aligned_cols=55 Identities=16% Similarity=0.050 Sum_probs=29.7
Q ss_pred eEEeccCCChhHHHHHHHHHhh----C-CCceEEEccccCccCchHHH-hhCCCCCcccEEEe--CCcc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLK----G-VPFEFVEEDVFSNEKSALLL-KYNPVHKKIPVLVH--GEKP 64 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~----g-i~~~~~~v~~~~~~~~~~~~-~~~p~~g~vP~L~~--~~~~ 64 (221)
+..|+.++|+.|+...-.+... + -.+....++.. .++.. +.+- ..+|++.. +|..
T Consensus 21 vv~F~a~wC~~Ck~~~p~l~~~~~~~~~~~~~~~~vd~d----~~~~~~~~~v--~~~Pt~~~~~~g~~ 83 (102)
T cd02948 21 VVDVYQEWCGPCKAVVSLFKKIKNELGDDLLHFATAEAD----TIDTLKRYRG--KCEPTFLFYKNGEL 83 (102)
T ss_pred EEEEECCcCHhHHHHhHHHHHHHHHcCCCcEEEEEEeCC----CHHHHHHcCC--CcCcEEEEEECCEE
Confidence 4567888999999765444322 2 12334444432 22333 3343 46898773 6643
No 220
>KOG2501 consensus Thioredoxin, nucleoredoxin and related proteins [General function prediction only]
Probab=28.90 E-value=1.2e+02 Score=22.43 Aligned_cols=44 Identities=23% Similarity=0.056 Sum_probs=25.9
Q ss_pred eEEec-cCCChhHHH-------HHHHHHhhCCCceEEEccccC-ccCchHHHh
Q 027575 4 VKLLG-TLPSPFVYR-------VIWALKLKGVPFEFVEEDVFS-NEKSALLLK 47 (221)
Q Consensus 4 ~~Ly~-~~~sp~~~~-------~~~~l~~~gi~~~~~~v~~~~-~~~~~~~~~ 47 (221)
+.||. -.+||-|+- .--.+...+-|++.+.|+.+. +..-.+|..
T Consensus 36 V~lyFsA~wC~pCR~FTP~Lk~fYe~l~~~~~~fEVvfVS~D~~~~~~~~y~~ 88 (157)
T KOG2501|consen 36 VGLYFSAHWCPPCRDFTPILKDFYEELKDNAAPFEVVFVSSDRDEESLDEYML 88 (157)
T ss_pred EEEEEEEEECCchhhCCchHHHHHHHHHhcCCceEEEEEecCCCHHHHHHHHH
Confidence 34553 347776662 334455567789999998874 222334444
No 221
>COG5515 Uncharacterized conserved small protein [Function unknown]
Probab=28.79 E-value=62 Score=19.63 Aligned_cols=21 Identities=38% Similarity=0.276 Sum_probs=15.5
Q ss_pred eEEecc----CCChhHHHHHHHHHh
Q 027575 4 VKLLGT----LPSPFVYRVIWALKL 24 (221)
Q Consensus 4 ~~Ly~~----~~sp~~~~~~~~l~~ 24 (221)
|+||.+ ..|.||.|+--+|..
T Consensus 3 mKLYRfiTGpDDssFChrvta~LN~ 27 (70)
T COG5515 3 MKLYRFITGPDDSSFCHRVTAALNK 27 (70)
T ss_pred ceeeEeecCCchHHHHHHHHHHHhC
Confidence 677754 456799999887764
No 222
>PF09413 DUF2007: Domain of unknown function (DUF2007); InterPro: IPR018551 This is a family of proteins with unknown function. ; PDB: 2HFV_A.
Probab=28.60 E-value=60 Score=19.58 Aligned_cols=32 Identities=19% Similarity=0.062 Sum_probs=19.7
Q ss_pred EEeccCCChhHHHHHHHHHhhCCCceEEEccc
Q 027575 5 KLLGTLPSPFVYRVIWALKLKGVPFEFVEEDV 36 (221)
Q Consensus 5 ~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~ 36 (221)
+||+.....-+..++-+|+..||++.......
T Consensus 2 ~l~~~~~~~ea~~i~~~L~~~gI~~~v~~~~~ 33 (67)
T PF09413_consen 2 KLYTAGDPIEAELIKGLLEENGIPAFVKNEHM 33 (67)
T ss_dssp EEEEE--HHHHHHHHHHHHHTT--EE--S---
T ss_pred EEEEcCCHHHHHHHHHHHHhCCCcEEEECCcc
Confidence 67777766679999999999999997765443
No 223
>cd02970 PRX_like2 Peroxiredoxin (PRX)-like 2 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a CXXC motif, similar to TRX. The second cysteine in the motif corresponds to the peroxidatic cysteine of PRX, however, these proteins do not contain the other two residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. TRXs alter the redox state of target proteins by catalyzing the reduction of their disulfide bonds via the CXXC motif using reducing equivalents derived from either NADPH or ferredoxins.
Probab=28.37 E-value=1e+02 Score=21.45 Aligned_cols=56 Identities=21% Similarity=0.204 Sum_probs=28.9
Q ss_pred ccCCChhHHHHHHHHHhh-----CCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccc
Q 027575 8 GTLPSPFVYRVIWALKLK-----GVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPV 65 (221)
Q Consensus 8 ~~~~sp~~~~~~~~l~~~-----gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i 65 (221)
...+||.|+.-.-.|... +-.++.+.|..........+.+.... ..|++.+.+..+
T Consensus 32 ~~~~Cp~C~~~~~~l~~~~~~~~~~~v~vv~V~~~~~~~~~~~~~~~~~--~~p~~~D~~~~~ 92 (149)
T cd02970 32 RGFGCPFCREYLRALSKLLPELDALGVELVAVGPESPEKLEAFDKGKFL--PFPVYADPDRKL 92 (149)
T ss_pred CCCCChhHHHHHHHHHHHHHHHHhcCeEEEEEeCCCHHHHHHHHHhcCC--CCeEEECCchhH
Confidence 357999998643333221 23345555554421112235555543 578888755443
No 224
>cd02996 PDI_a_ERp44 PDIa family, endoplasmic reticulum protein 44 (ERp44) subfamily; ERp44 is an ER-resident protein, induced during stress, involved in thiol-mediated ER retention. It contains an N-terminal TRX domain, similar to that of PDIa, with a CXFS motif followed by two redox inactive TRX-like domains, homologous to the b and b' domains of PDI. The CXFS motif in the N-terminal domain allows ERp44 to form stable reversible mixed disulfides with its substrates. Through this activity, ERp44 mediates the ER localization of Ero1alpha, a protein that oxidizes protein disulfide isomerases into their active form. ERp44 also prevents the secretion of unassembled cargo protein with unpaired cysteines. It also modulates the activity of inositol 1,4,5-triphosphate type I receptor (IP3R1), an intracellular channel protein that mediates calcium release from the ER to the cytosol.
Probab=26.15 E-value=2e+02 Score=18.93 Aligned_cols=55 Identities=11% Similarity=-0.011 Sum_probs=31.4
Q ss_pred eEEeccCCChhHHHHHHHHHhh-----C-C----CceEEEccccCccCchHHH-hhCCCCCcccEEEe--CCc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLK-----G-V----PFEFVEEDVFSNEKSALLL-KYNPVHKKIPVLVH--GEK 63 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~-----g-i----~~~~~~v~~~~~~~~~~~~-~~~p~~g~vP~L~~--~~~ 63 (221)
+..|+.++|+.|+...-.+... + . .+....+|.. .. .++. +.+- ..+|++.. +|.
T Consensus 22 lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~~~~~~vd~d--~~-~~l~~~~~v--~~~Ptl~~~~~g~ 89 (108)
T cd02996 22 LVNFYADWCRFSQMLHPIFEEAAAKIKEEFPDAGKVVWGKVDCD--KE-SDIADRYRI--NKYPTLKLFRNGM 89 (108)
T ss_pred EEEEECCCCHHHHhhHHHHHHHHHHHhhccCCCCcEEEEEEECC--CC-HHHHHhCCC--CcCCEEEEEeCCc
Confidence 4567889999999876555321 1 1 2344455543 22 3443 3344 47899883 554
No 225
>PF11823 DUF3343: Protein of unknown function (DUF3343); InterPro: IPR021778 This family of proteins are functionally uncharacterised. This protein is found in bacteria and archaea. Proteins in this family are typically between 78 to 102 amino acids in length.
Probab=26.14 E-value=1.3e+02 Score=18.66 Aligned_cols=33 Identities=15% Similarity=0.126 Sum_probs=26.7
Q ss_pred EEeccCCChhHHHHHHHHHhhCCCceEEEcccc
Q 027575 5 KLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVF 37 (221)
Q Consensus 5 ~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~ 37 (221)
-+..++....+.++.-+|...|++++.++++..
T Consensus 4 ~~i~F~st~~a~~~ek~lk~~gi~~~liP~P~~ 36 (73)
T PF11823_consen 4 YLITFPSTHDAMKAEKLLKKNGIPVRLIPTPRE 36 (73)
T ss_pred EEEEECCHHHHHHHHHHHHHCCCcEEEeCCChh
Confidence 355566777899999999999999988887653
No 226
>PF12062 HSNSD: heparan sulfate-N-deacetylase; InterPro: IPR021930 This family of proteins is are heparan sulphate N-deacetylase enzymes. This protein is found in eukaryotes. This enzyme is often found associated with PF00685 from PFAM. ; GO: 0015016 [heparan sulfate]-glucosamine N-sulfotransferase activity, 0016787 hydrolase activity
Probab=26.11 E-value=1.1e+02 Score=26.90 Aligned_cols=42 Identities=12% Similarity=0.119 Sum_probs=33.4
Q ss_pred EEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeC
Q 027575 5 KLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHG 61 (221)
Q Consensus 5 ~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~ 61 (221)
.++.+-+|...+.+..+|+...++|+.+.++-. |.+|+|.++
T Consensus 64 VFvES~YS~lGq~Iv~ILes~Rf~y~~ei~~~k---------------g~lP~LT~~ 105 (487)
T PF12062_consen 64 VFVESQYSQLGQDIVAILESNRFKYKVEIASGK---------------GDLPVLTDN 105 (487)
T ss_pred EEEeeccchhhHHHHHHHHhceeeEEEEEccCC---------------CCCCccccC
Confidence 455566889999999999999999998887643 567777764
No 227
>PRK13949 shikimate kinase; Provisional
Probab=26.06 E-value=1e+02 Score=22.66 Aligned_cols=31 Identities=19% Similarity=0.064 Sum_probs=27.6
Q ss_pred CcceEEeccCCChhHHHHHHHHHhhCCCceE
Q 027575 1 MAEVKLLGTLPSPFVYRVIWALKLKGVPFEF 31 (221)
Q Consensus 1 M~~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~ 31 (221)
|.++.|.|.++|+=+...+++....|+++..
T Consensus 1 m~~I~liG~~GsGKstl~~~La~~l~~~~id 31 (169)
T PRK13949 1 MARIFLVGYMGAGKTTLGKALARELGLSFID 31 (169)
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHcCCCeec
Confidence 7779999999999999999999999988744
No 228
>cd02972 DsbA_family DsbA family; consists of DsbA and DsbA-like proteins, including DsbC, DsbG, glutathione (GSH) S-transferase kappa (GSTK), 2-hydroxychromene-2-carboxylate (HCCA) isomerase, an oxidoreductase (FrnE) presumed to be involved in frenolicin biosynthesis, a 27-kDa outer membrane protein, and similar proteins. Members of this family contain a redox active CXXC motif (except GSTK and HCCA isomerase) imbedded in a TRX fold, and an alpha helical insert of about 75 residues (shorter in DsbC and DsbG) relative to TRX. DsbA is involved in the oxidative protein folding pathway in prokaryotes, catalyzing disulfide bond formation of proteins secreted into the bacterial periplasm. DsbC and DsbG function as protein disulfide isomerases and chaperones to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins.
Probab=25.86 E-value=1.2e+02 Score=18.81 Aligned_cols=22 Identities=14% Similarity=0.042 Sum_probs=17.0
Q ss_pred eEEeccCCChhHHHHHHHHHhh
Q 027575 4 VKLLGTLPSPFVYRVIWALKLK 25 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~ 25 (221)
+.+|..+.||+|....-.+...
T Consensus 1 i~~f~d~~Cp~C~~~~~~l~~~ 22 (98)
T cd02972 1 IVEFFDPLCPYCYLFEPELEKL 22 (98)
T ss_pred CeEEECCCCHhHHhhhHHHHHH
Confidence 4678889999999877666553
No 229
>cd02978 KaiB_like KaiB-like family; composed of the circadian clock proteins, KaiB and the N-terminal KaiB-like sensory domain of SasA. KaiB is an essential protein in maintaining circadian rhythm. It was originally discovered from the cyanobacterium Synechococcus as part of the circadian clock gene cluster, kaiABC. KaiB attenuates KaiA-enhanced KaiC autokinase activity by interacting with KaiA-KaiC complexes in a circadian fashion. KaiB is membrane-associated as well as cytosolic. The amount of membrane-associated protein peaks in the evening (at circadian time (CT) 12-16) while the cytosolic form peaks later (at CT 20). The rhythmic localization of KaiB may function in regulating the formation of Kai complexes. SasA is a sensory histidine kinase which associates with KaiC. Although it is not an essential oscillator component, it is important in enhancing kaiABC expression and is important in metabolic growth control under day/night cycle conditions. SasA contains an N-terminal sensor
Probab=25.83 E-value=1.8e+02 Score=18.34 Aligned_cols=53 Identities=26% Similarity=0.306 Sum_probs=34.7
Q ss_pred eEEeccCCChhHHHH-----HHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEe
Q 027575 4 VKLLGTLPSPFVYRV-----IWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH 60 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~-----~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~ 60 (221)
++||-...+|.++++ +++=++.+-+|+...+|.. ..+++...... -.+|+|+.
T Consensus 4 L~Lyv~g~tp~S~~ai~nl~~i~e~~l~~~~~LeVIDv~---~~P~lAe~~~i-vAtPtLvk 61 (72)
T cd02978 4 LRLYVAGRTPKSERALQNLKRILEELLGGPYELEVIDVL---KQPQLAEEDKI-VATPTLVK 61 (72)
T ss_pred EEEEECCCCchHHHHHHHHHHHHHHhcCCcEEEEEEEcc---cCHhHHhhCCE-EEechhhh
Confidence 678888777877753 3333444779999999984 34555555444 35777763
No 230
>PRK13808 adenylate kinase; Provisional
Probab=25.43 E-value=2e+02 Score=24.14 Aligned_cols=91 Identities=16% Similarity=0.042 Sum_probs=49.5
Q ss_pred CcceEEeccCCChhHHHHHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEeCCccccchH---HHHHHHHh
Q 027575 1 MAEVKLLGTLPSPFVYRVIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVHGEKPVCDSM---VILEYIEE 77 (221)
Q Consensus 1 M~~~~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~~~~~i~es~---~I~~yL~~ 77 (221)
|. +.|+|.|+|+-+-.++.+....|+++- +.. +..+.++....|.+..++-+..+|..+.+.. .|.+.|..
T Consensus 1 mr-Iiv~GpPGSGK~T~a~~LA~~ygl~~i----s~g-dlLR~~i~~~s~~g~~~~~~~~~G~lVPdeiv~~li~e~l~~ 74 (333)
T PRK13808 1 MR-LILLGPPGAGKGTQAQRLVQQYGIVQL----STG-DMLRAAVAAGTPVGLKAKDIMASGGLVPDEVVVGIISDRIEQ 74 (333)
T ss_pred CE-EEEECCCCCCHHHHHHHHHHHhCCcee----ccc-HHHHHHhhcCChhhHHHHHHHHcCCCCCHHHHHHHHHHHHhc
Confidence 44 889999999999999999998888553 221 0123333333444223444445555555544 23344433
Q ss_pred hCCCCC----CCCCCHHHHHHHHH
Q 027575 78 MWPQSP----LMPNDPYDRALARF 97 (221)
Q Consensus 78 ~~~~~~----l~p~~~~~~a~~~~ 97 (221)
...... -||.+..+......
T Consensus 75 ~~~~~G~ILDGFPRt~~QA~~L~~ 98 (333)
T PRK13808 75 PDAANGFILDGFPRTVPQAEALDA 98 (333)
T ss_pred ccccCCEEEeCCCCCHHHHHHHHH
Confidence 221122 26777654444433
No 231
>TIGR01764 excise DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376).
Probab=25.19 E-value=85 Score=16.97 Aligned_cols=24 Identities=21% Similarity=0.267 Sum_probs=19.1
Q ss_pred CcccEEEeCCccccchHHHHHHHH
Q 027575 53 KKIPVLVHGEKPVCDSMVILEYIE 76 (221)
Q Consensus 53 g~vP~L~~~~~~i~es~~I~~yL~ 76 (221)
|.+|....++..+.....|.+|++
T Consensus 25 g~i~~~~~g~~~~~~~~~l~~~~~ 48 (49)
T TIGR01764 25 GELPAYRVGRHYRIPREDVDEYLE 48 (49)
T ss_pred CCCCeEEeCCeEEEeHHHHHHHHh
Confidence 678887777778888888888875
No 232
>cd03022 DsbA_HCCA_Iso DsbA family, 2-hydroxychromene-2-carboxylate (HCCA) isomerase subfamily; HCCA isomerase is a glutathione (GSH) dependent enzyme involved in the naphthalene catabolic pathway. It converts HCCA, a hemiketal formed spontaneously after ring cleavage of 1,2-dihydroxynapthalene by a dioxygenase, into cis-o-hydroxybenzylidenepyruvate (cHBPA). This is the fourth reaction in a six-step pathway that converts napthalene into salicylate. HCCA isomerase is unique to bacteria that degrade polycyclic aromatic compounds. It is closely related to the eukaryotic protein, GSH transferase kappa (GSTK).
Probab=24.85 E-value=1.1e+02 Score=22.62 Aligned_cols=32 Identities=13% Similarity=0.155 Sum_probs=20.3
Q ss_pred eEEeccCCChhHHHHHH----HHHhhCCCceEEEcc
Q 027575 4 VKLLGTLPSPFVYRVIW----ALKLKGVPFEFVEED 35 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~----~l~~~gi~~~~~~v~ 35 (221)
+++|+...||||+...- +....++.++.+.+.
T Consensus 1 i~~~~D~~cP~cy~~~~~l~~~~~~~~~~i~~~p~~ 36 (192)
T cd03022 1 IDFYFDFSSPYSYLAHERLPALAARHGATVRYRPIL 36 (192)
T ss_pred CeEEEeCCChHHHHHHHHHHHHHHHhCCeeEEeeee
Confidence 46888999999986533 333445555555543
No 233
>cd02950 TxlA TRX-like protein A (TxlA) family; TxlA was originally isolated from the cyanobacterium Synechococcus. It is found only in oxygenic photosynthetic organisms. TRX is a small enzyme that participate in redox reactions, via the reversible oxidation of an active site dithiol present in a CXXC motif. Disruption of the txlA gene suggests that the protein is involved in the redox regulation of the structure and function of photosynthetic apparatus. The plant homolog (designated as HCF164) is localized in the chloroplast and is involved in the assembly of the cytochrome b6f complex, which takes a central position in photosynthetic electron transport.
Probab=24.75 E-value=2.6e+02 Score=19.82 Aligned_cols=60 Identities=13% Similarity=0.012 Sum_probs=31.0
Q ss_pred eEEeccCCChhHHHHHHHHHhh----CCCceEEEccccCccCchHHHhhCCCCCcccEEEe---CCccc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLK----GVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH---GEKPV 65 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~----gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~---~~~~i 65 (221)
+..|+.++|+.|+...=.+... +-.+..+.++...+.......+.+- ..+|+++. +|..+
T Consensus 24 vV~F~A~WC~~C~~~~p~l~~l~~~~~~~~~~v~v~vd~~~~~~~~~~~~V--~~iPt~v~~~~~G~~v 90 (142)
T cd02950 24 LVEFYADWCTVCQEMAPDVAKLKQKYGDQVNFVMLNVDNPKWLPEIDRYRV--DGIPHFVFLDREGNEE 90 (142)
T ss_pred EEEEECCcCHHHHHhHHHHHHHHHHhccCeeEEEEEcCCcccHHHHHHcCC--CCCCEEEEECCCCCEE
Confidence 4566778999998765444322 2224444454431111222334444 35898873 45443
No 234
>PTZ00102 disulphide isomerase; Provisional
Probab=24.52 E-value=4.6e+02 Score=22.62 Aligned_cols=72 Identities=17% Similarity=0.130 Sum_probs=42.3
Q ss_pred eEEeccCCChhHHHHHHH-------HHhhCCCceEEEccccCccCchHHH-hhCCCCCcccEEEe--CCccc-----cch
Q 027575 4 VKLLGTLPSPFVYRVIWA-------LKLKGVPFEFVEEDVFSNEKSALLL-KYNPVHKKIPVLVH--GEKPV-----CDS 68 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~-------l~~~gi~~~~~~v~~~~~~~~~~~~-~~~p~~g~vP~L~~--~~~~i-----~es 68 (221)
+..|+.++|++|++..=. +...+-++....+|.. . ..++. +.+- ..+|++.. +|..+ ...
T Consensus 53 lv~f~a~wC~~Ck~~~p~~~~~a~~~~~~~~~i~~~~vd~~--~-~~~l~~~~~i--~~~Pt~~~~~~g~~~~y~g~~~~ 127 (477)
T PTZ00102 53 LVKFYAPWCGHCKRLAPEYKKAAKMLKEKKSEIVLASVDAT--E-EMELAQEFGV--RGYPTIKFFNKGNPVNYSGGRTA 127 (477)
T ss_pred EEEEECCCCHHHHHhhHHHHHHHHHHHhcCCcEEEEEEECC--C-CHHHHHhcCC--CcccEEEEEECCceEEecCCCCH
Confidence 567888999999976421 1222334666666653 2 23333 3444 35898873 44321 345
Q ss_pred HHHHHHHHhhCC
Q 027575 69 MVILEYIEEMWP 80 (221)
Q Consensus 69 ~~I~~yL~~~~~ 80 (221)
..|.+++.+...
T Consensus 128 ~~l~~~l~~~~~ 139 (477)
T PTZ00102 128 DGIVSWIKKLTG 139 (477)
T ss_pred HHHHHHHHHhhC
Confidence 678899988753
No 235
>PF10022 DUF2264: Uncharacterized protein conserved in bacteria (DUF2264); InterPro: IPR016624 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=24.17 E-value=1.5e+02 Score=25.04 Aligned_cols=102 Identities=11% Similarity=-0.065 Sum_probs=64.4
Q ss_pred ccEEEeCCccccchHHHHHHHHhhCCCCCCC-CCCHHHHHHHHHHHHHhhhh-hh--hH------H----hhcCCchHHH
Q 027575 55 IPVLVHGEKPVCDSMVILEYIEEMWPQSPLM-PNDPYDRALARFWIKFGEDK-GV--AV------W----KMFHSNQDEE 120 (221)
Q Consensus 55 vP~L~~~~~~i~es~~I~~yL~~~~~~~~l~-p~~~~~~a~~~~~~~~~~~~-~~--~~------~----~~~~~~~~~~ 120 (221)
.+...+.+..+.|+.+|+.-|...-. .+. |-+..++.++..|+..+.+. .+ ++ . ..++.+-+
T Consensus 98 w~~~~~~dQ~~VEaa~la~aL~~a~~--~lW~~L~~~~k~~l~~wL~~~~~~~~~~nNW~lF~v~v~~~L~~~G~~~d-- 173 (361)
T PF10022_consen 98 WGFIGDYDQRLVEAASLALALLRAPE--WLWDPLDEEEKENLVDWLKQIRGIKPPDNNWLLFRVMVEAFLKKVGEEYD-- 173 (361)
T ss_pred cCCcccchhhHhHHHHHHHHHHHCHH--HHHhhCCHHHHHHHHHHHHhcCcCCCccchhHHHHHHHHHHHHHcCCCCc--
Confidence 34444557899999999999876421 233 56888999999999877655 21 11 1 11122111
Q ss_pred HHHHHHHHHHHHHHhcccCCCCeeecCCCchhHHHHHHHHHHH
Q 027575 121 SRMKEILEMLQTIEEHGIGEKKIFHGDKIGSLEIAFGSMLYWL 163 (221)
Q Consensus 121 ~~~~~~~~~l~~l~e~~L~~~~~l~G~~~t~aD~~l~~~l~~~ 163 (221)
..++...++.+ |++-.+..|+..+.-.-.|.+..-+++..
T Consensus 174 --~~~i~~~l~~~-e~~Y~GdGWY~DG~~~~~DYYns~aih~y 213 (361)
T PF10022_consen 174 --EERIDYDLERI-EEWYLGDGWYSDGPEFQFDYYNSWAIHPY 213 (361)
T ss_pred --HHHHHHHHHHH-HHHhccCCccccCCccCCcchHHHHHHHH
Confidence 26777788888 66665556764444567788876666655
No 236
>cd03024 DsbA_FrnE DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif. It is presumed to be a thiol oxidoreductase involved in polyketide biosynthesis, specifically in the production of the aromatic antibiotics frenolicin and nanaomycins.
Probab=24.03 E-value=88 Score=23.36 Aligned_cols=19 Identities=16% Similarity=0.338 Sum_probs=14.1
Q ss_pred eEEeccCCChhHHHHHHHH
Q 027575 4 VKLLGTLPSPFVYRVIWAL 22 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l 22 (221)
+++|+...||||....--|
T Consensus 1 I~~~~D~~cP~cyl~~~~l 19 (201)
T cd03024 1 IDIWSDVVCPWCYIGKRRL 19 (201)
T ss_pred CeEEecCcCccHHHHHHHH
Confidence 4688999999998554444
No 237
>cd02987 Phd_like_Phd Phosducin (Phd)-like family, Phd subfamily; Phd is a cytosolic regulator of G protein functions. It specifically binds G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane. This impedes the formation of a functional G protein trimer (G protein alphabetagamma), thereby inhibiting G protein-mediated signal transduction. Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-terminal helical domain.
Probab=23.74 E-value=3.1e+02 Score=20.35 Aligned_cols=59 Identities=10% Similarity=-0.036 Sum_probs=32.5
Q ss_pred EEeccCCChhHHHHHHHHHh---hCCCceEEEccccCccCchHHHhhCCCCCcccEEEe--CCccccch
Q 027575 5 KLLGTLPSPFVYRVIWALKL---KGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH--GEKPVCDS 68 (221)
Q Consensus 5 ~Ly~~~~sp~~~~~~~~l~~---~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~--~~~~i~es 68 (221)
..|+.++|+.|+.+.=.|.. .--.+..+.|+.. . . ++....+. ..+|+++. +|..+..-
T Consensus 88 V~Fya~wc~~Ck~m~~~l~~LA~~~~~vkF~kVd~d--~-~-~l~~~f~v-~~vPTlllyk~G~~v~~~ 151 (175)
T cd02987 88 VHIYEPGIPGCAALNSSLLCLAAEYPAVKFCKIRAS--A-T-GASDEFDT-DALPALLVYKGGELIGNF 151 (175)
T ss_pred EEEECCCCchHHHHHHHHHHHHHHCCCeEEEEEecc--c-h-hhHHhCCC-CCCCEEEEEECCEEEEEE
Confidence 35677899999865433321 1112344455543 2 1 44444454 57999984 77665543
No 238
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=23.52 E-value=1.3e+02 Score=21.92 Aligned_cols=27 Identities=19% Similarity=0.271 Sum_probs=20.6
Q ss_pred CChhHHHHHHHHHhhCCCceEEEcccc
Q 027575 11 PSPFVYRVIWALKLKGVPFEFVEEDVF 37 (221)
Q Consensus 11 ~sp~~~~~~~~l~~~gi~~~~~~v~~~ 37 (221)
.-+.+++++-.|+..|++|+.......
T Consensus 12 D~~~~~~a~~~L~~~gi~~~~~V~saH 38 (150)
T PF00731_consen 12 DLPIAEEAAKTLEEFGIPYEVRVASAH 38 (150)
T ss_dssp GHHHHHHHHHHHHHTT-EEEEEE--TT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEEecc
Confidence 447899999999999999998777653
No 239
>KOG0190 consensus Protein disulfide isomerase (prolyl 4-hydroxylase beta subunit) [Posttranslational modification, protein turnover, chaperones]
Probab=23.48 E-value=5.3e+02 Score=22.98 Aligned_cols=73 Identities=14% Similarity=0.094 Sum_probs=47.8
Q ss_pred eEEeccCCChhHHH-------HHHHHHhhCCCceEEEccccCccCchHHHhhCCCCCcccEEEe--CCcc------ccch
Q 027575 4 VKLLGTLPSPFVYR-------VIWALKLKGVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH--GEKP------VCDS 68 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~-------~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~--~~~~------i~es 68 (221)
+.-||-|+|..|.+ +.-.|...|-+.....||-.. . .++-...-. .-.|+|.+ ||.. ..+.
T Consensus 46 lVeFYAPWCghck~LaPey~kAA~~Lke~~s~i~LakVDat~--~-~~~~~~y~v-~gyPTlkiFrnG~~~~~Y~G~r~a 121 (493)
T KOG0190|consen 46 LVEFYAPWCGHCKALAPEYEKAATELKEEGSPVKLAKVDATE--E-SDLASKYEV-RGYPTLKIFRNGRSAQDYNGPREA 121 (493)
T ss_pred EEEEEchhhhhhhhhCcHHHHHHHHhhccCCCceeEEeecch--h-hhhHhhhcC-CCCCeEEEEecCCcceeccCcccH
Confidence 46678889988875 444555666688888888652 1 233322222 24788885 6653 4567
Q ss_pred HHHHHHHHhhCC
Q 027575 69 MVILEYIEEMWP 80 (221)
Q Consensus 69 ~~I~~yL~~~~~ 80 (221)
-.|+.||-++.+
T Consensus 122 dgIv~wl~kq~g 133 (493)
T KOG0190|consen 122 DGIVKWLKKQSG 133 (493)
T ss_pred HHHHHHHHhccC
Confidence 889999988864
No 240
>cd02997 PDI_a_PDIR PDIa family, PDIR subfamily; composed of proteins similar to human PDIR (for Protein Disulfide Isomerase Related). PDIR is composed of three redox active TRX (a) domains and an N-terminal redox inactive TRX-like (b) domain. Similar to PDI, it is involved in oxidative protein folding in the endoplasmic reticulum (ER) through its isomerase and chaperone activities. These activities are lower compared to PDI, probably due to PDIR acting only on a subset of proteins. PDIR is preferentially expressed in cells actively secreting proteins and its expression is induced by stress. Similar to PDI, the isomerase and chaperone activities of PDIR are independent; CXXC mutants lacking isomerase activity retain chaperone activity.
Probab=23.01 E-value=2.2e+02 Score=18.26 Aligned_cols=57 Identities=12% Similarity=-0.003 Sum_probs=29.5
Q ss_pred eEEeccCCChhHHHHHHHH----HhhC--CCceEEEccccCccCchHHH-hhCCCCCcccEEEe--CCc
Q 027575 4 VKLLGTLPSPFVYRVIWAL----KLKG--VPFEFVEEDVFSNEKSALLL-KYNPVHKKIPVLVH--GEK 63 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l----~~~g--i~~~~~~v~~~~~~~~~~~~-~~~p~~g~vP~L~~--~~~ 63 (221)
+.+|+.++|+.|+...=.+ ...+ -.+....++... .....+. +.+- ..+|+++. +|.
T Consensus 21 ~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~id~~~-~~~~~~~~~~~i--~~~Pt~~~~~~g~ 86 (104)
T cd02997 21 LVMFYAPWCGHCKKMKPEFTKAATELKEDGKGVLAAVDCTK-PEHDALKEEYNV--KGFPTFKYFENGK 86 (104)
T ss_pred EEEEECCCCHHHHHhCHHHHHHHHHHhhCCceEEEEEECCC-CccHHHHHhCCC--ccccEEEEEeCCC
Confidence 5677889999999764222 2211 223344444431 1133333 3344 36898874 454
No 241
>COG4105 ComL DNA uptake lipoprotein [General function prediction only]
Probab=22.99 E-value=3.2e+02 Score=21.94 Aligned_cols=90 Identities=10% Similarity=0.114 Sum_probs=53.7
Q ss_pred eccCCChhHHHHHHHHHhhCC---CceEEEccccCccCchHHHhhCCCCCccc---------------EEEeCCccccch
Q 027575 7 LGTLPSPFVYRVIWALKLKGV---PFEFVEEDVFSNEKSALLLKYNPVHKKIP---------------VLVHGEKPVCDS 68 (221)
Q Consensus 7 y~~~~sp~~~~~~~~l~~~gi---~~~~~~v~~~~~~~~~~~~~~~p~~g~vP---------------~L~~~~~~i~es 68 (221)
..+|++|+++++.+.+....- +|+.-.. .-+.|+..+|.+..++ ....|-....++
T Consensus 62 ~~~p~s~~~~qa~l~l~yA~Yk~~~y~~A~~------~~drFi~lyP~~~n~dY~~YlkgLs~~~~i~~~~rDq~~~~~A 135 (254)
T COG4105 62 SRHPFSPYSEQAQLDLAYAYYKNGEYDLALA------YIDRFIRLYPTHPNADYAYYLKGLSYFFQIDDVTRDQSAARAA 135 (254)
T ss_pred HcCCCCcccHHHHHHHHHHHHhcccHHHHHH------HHHHHHHhCCCCCChhHHHHHHHHHHhccCCccccCHHHHHHH
Confidence 457899999999888877643 4433322 2456777777432222 222233456667
Q ss_pred HHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHhhhh
Q 027575 69 MVILEYIEEMWPQSPLMPNDPYDRALARFWIKFGEDK 105 (221)
Q Consensus 69 ~~I~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~ 105 (221)
..=+..+..+||+....+. .+.++..+.....+.
T Consensus 136 ~~~f~~~i~ryPnS~Ya~d---A~~~i~~~~d~LA~~ 169 (254)
T COG4105 136 FAAFKELVQRYPNSRYAPD---AKARIVKLNDALAGH 169 (254)
T ss_pred HHHHHHHHHHCCCCcchhh---HHHHHHHHHHHHHHH
Confidence 7777778888886555332 355555555555555
No 242
>PF12728 HTH_17: Helix-turn-helix domain
Probab=22.29 E-value=1.1e+02 Score=17.08 Aligned_cols=26 Identities=23% Similarity=0.202 Sum_probs=21.4
Q ss_pred CcccEEEeCCccccchHHHHHHHHhh
Q 027575 53 KKIPVLVHGEKPVCDSMVILEYIEEM 78 (221)
Q Consensus 53 g~vP~L~~~~~~i~es~~I~~yL~~~ 78 (221)
|.+|....|+.....-.+|.+|+.++
T Consensus 25 g~i~~~~~g~~~~~~~~~l~~~~~~~ 50 (51)
T PF12728_consen 25 GKIPPFKIGRKWRIPKSDLDRWLERR 50 (51)
T ss_pred CCCCeEEeCCEEEEeHHHHHHHHHhC
Confidence 67888887888888888999988763
No 243
>cd03025 DsbA_FrnE_like DsbA family, FrnE-like subfamily; composed of uncharacterized proteins containing a CXXC motif with similarity to DsbA and FrnE. FrnE is presumed to be a thiol oxidoreductase involved in polyketide biosynthesis, specifically in the production of the aromatic antibiotics frenolicin and nanaomycins.
Probab=21.70 E-value=1.6e+02 Score=21.77 Aligned_cols=31 Identities=10% Similarity=-0.038 Sum_probs=20.0
Q ss_pred eEEeccCCChhHHHHHHH----HHhh--CCCceEEEc
Q 027575 4 VKLLGTLPSPFVYRVIWA----LKLK--GVPFEFVEE 34 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~----l~~~--gi~~~~~~v 34 (221)
+.+|..+.||||+...-. .... +++++.+..
T Consensus 3 i~~~~D~~cp~c~~~~~~l~~l~~~~~~~~~v~~~~~ 39 (193)
T cd03025 3 LYYFIDPLCGWCYGFEPLLEKLKEEYGGGIEVELHLG 39 (193)
T ss_pred EEEEECCCCchhhCchHHHHHHHHHhCCCceEEEEec
Confidence 889999999999854433 3333 555555443
No 244
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=21.30 E-value=1.8e+02 Score=19.71 Aligned_cols=29 Identities=24% Similarity=0.309 Sum_probs=22.9
Q ss_pred EEeccCCChhHHHHHHHHHhhCCCceEEE
Q 027575 5 KLLGTLPSPFVYRVIWALKLKGVPFEFVE 33 (221)
Q Consensus 5 ~Ly~~~~sp~~~~~~~~l~~~gi~~~~~~ 33 (221)
.|......|...-++.+++++|||++...
T Consensus 59 vLVr~~~~pd~~Hl~~LA~ekgVpVe~~~ 87 (100)
T PF15608_consen 59 VLVRDPDDPDLAHLLLLAEEKGVPVEVYP 87 (100)
T ss_pred EEECCCCCccHHHHHHHHHHcCCcEEEeC
Confidence 45556677888889999999999987765
No 245
>cd00449 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV). This D-amino acid superfamily, one of five classes of PLPDE, consists of branched-chain amino acid aminotransferases (BCAT), D-amino acid transferases (DAAT), and 4-amino-4-deoxychorismate lyases (ADCL). BCAT catalyzes the reversible transamination reaction between the L-branched-chain amino and alpha-keto acids. DAAT catalyzes the synthesis of D-glutamic acid and D-alanine, and ADCL converts 4-amino-4-deoxychorismate to p-aminobenzoate and pyruvate. Except for a few enzymes, i. e., Escherichia coli and Salmonella BCATs, which are homohexamers arranged as a double trimer, the class IV PLPDEs are homodimers. Homodimer formation is required for catalytic activity.
Probab=21.25 E-value=91 Score=24.46 Aligned_cols=57 Identities=12% Similarity=0.075 Sum_probs=35.9
Q ss_pred HHHhhCCCceEEEccccC-ccCchHHHhhCCCCCcccEEEeCCccc--cchHHHHHHHHhh
Q 027575 21 ALKLKGVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLVHGEKPV--CDSMVILEYIEEM 78 (221)
Q Consensus 21 ~l~~~gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~~~~~~i--~es~~I~~yL~~~ 78 (221)
.+...|++++...+.+.. ....+-|.--+-. |-+||-..++..+ .....|.+.|.+.
T Consensus 196 ~~~~~g~~v~e~~i~~~dL~~adevfl~ns~~-gv~pV~~i~~~~~~~~~~~~~~~~l~~~ 255 (256)
T cd00449 196 LAKELGIKVEERPISLDELYAADEVFLTGTAA-EVTPVTEIDGRGIGDGKPGPVTRKLREL 255 (256)
T ss_pred HHHHcCCeEEEEecCHHHHhhCCEEEEccccc-eEEEEEEECCeecCCCCCCHHHHHHHHh
Confidence 456679999998887753 2222333333333 7899999887766 3445677766543
No 246
>TIGR01130 ER_PDI_fam protein disulfide isomerases, eukaryotic. Members of this family have at least two protein-disulfide domains, each similar to thioredoxin but with the redox-active disulfide in the motif PWCGHCK, and an ER retention signal at the extreme C-terminus (KDEL, HDEL, and similar motifs).
Probab=20.89 E-value=5.3e+02 Score=21.96 Aligned_cols=72 Identities=19% Similarity=0.163 Sum_probs=41.6
Q ss_pred eEEeccCCChhHHHHHHHHH-----hh--CCCceEEEccccCccCchHHH-hhCCCCCcccEEEe--CCcc-------cc
Q 027575 4 VKLLGTLPSPFVYRVIWALK-----LK--GVPFEFVEEDVFSNEKSALLL-KYNPVHKKIPVLVH--GEKP-------VC 66 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~-----~~--gi~~~~~~v~~~~~~~~~~~~-~~~p~~g~vP~L~~--~~~~-------i~ 66 (221)
+.+|+.++|+.|++..=.+. .. +-++....|+.. . ..++. +.+- ..+|++.. +|.. -.
T Consensus 22 ~v~f~a~wC~~c~~~~~~~~~~a~~~~~~~~~v~~~~vd~~--~-~~~l~~~~~i--~~~Pt~~~~~~g~~~~~~~~g~~ 96 (462)
T TIGR01130 22 LVEFYAPWCGHCKSLAPEYEKAADELKKKGPPIKLAKVDAT--E-EKDLAQKYGV--SGYPTLKIFRNGEDSVSDYNGPR 96 (462)
T ss_pred EEEEECCCCHHHHhhhHHHHHHHHHHhhcCCceEEEEEECC--C-cHHHHHhCCC--ccccEEEEEeCCccceeEecCCC
Confidence 56788899999997642222 22 323555555553 2 23343 3343 36898873 4443 13
Q ss_pred chHHHHHHHHhhCC
Q 027575 67 DSMVILEYIEEMWP 80 (221)
Q Consensus 67 es~~I~~yL~~~~~ 80 (221)
+...|.+++.+..+
T Consensus 97 ~~~~l~~~i~~~~~ 110 (462)
T TIGR01130 97 DADGIVKYMKKQSG 110 (462)
T ss_pred CHHHHHHHHHHhcC
Confidence 46678888877653
No 247
>cd02961 PDI_a_family Protein Disulfide Isomerase (PDIa) family, redox active TRX domains; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants. Members of this family include PDI and PDI-related proteins like ERp72, ERp57 (or ERp60), ERp44, P5, PDIR, ERp46 and the transmembrane PDIs. PDI, ERp57, ERp72, P5, PDIR and ERp46 are all oxidases, catalyzing the formation of disulfide bonds of newly synthesized polypeptides in the ER. They also exhibit reductase activity in acting as isomerases to correct any non-native disulfide bonds, as well as chaperone activity to prevent protein aggregation and facilitate the folding of newly synthesized proteins. These proteins usually contain multiple copies of a redox active TRX (a) domain containing a CXXC motif, and may also contain one or more redox inactive TRX-like (b) domains. Only one a domain is required for the oxidase function but multiple copies
Probab=20.76 E-value=2.3e+02 Score=17.65 Aligned_cols=53 Identities=8% Similarity=-0.134 Sum_probs=31.3
Q ss_pred eEEeccCCChhHHHHHHHHHhh------CCCceEEEccccCccCchHHHhhCCCCCcccEEEe
Q 027575 4 VKLLGTLPSPFVYRVIWALKLK------GVPFEFVEEDVFSNEKSALLLKYNPVHKKIPVLVH 60 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~------gi~~~~~~v~~~~~~~~~~~~~~~p~~g~vP~L~~ 60 (221)
+.+|+.++|++|+...-.+... +-.+....++.. . ...+.+.-.. ..+|++..
T Consensus 19 ~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~-~~~~~~~~~i-~~~Pt~~~ 77 (101)
T cd02961 19 LVEFYAPWCGHCKALAPEYEKLAKELKGDGKVVVAKVDCT--A-NNDLCSEYGV-RGYPTIKL 77 (101)
T ss_pred EEEEECCCCHHHHhhhHHHHHHHHHhccCCceEEEEeecc--c-hHHHHHhCCC-CCCCEEEE
Confidence 5678888999999866655432 234555555543 2 3344433332 46898873
No 248
>COG3109 ProQ Activator of osmoprotectant transporter ProP [Signal transduction mechanisms]
Probab=20.60 E-value=3.8e+02 Score=20.19 Aligned_cols=19 Identities=21% Similarity=0.522 Sum_probs=16.1
Q ss_pred ccccchHHHHHHHHhhCCC
Q 027575 63 KPVCDSMVILEYIEEMWPQ 81 (221)
Q Consensus 63 ~~i~es~~I~~yL~~~~~~ 81 (221)
..+..|-.++-||.++||-
T Consensus 5 ekl~~~kEvIa~Lae~FPl 23 (208)
T COG3109 5 EKLNNSKEVIAYLAERFPL 23 (208)
T ss_pred hhccchHHHHHHHHHhCcc
Confidence 4577888999999999984
No 249
>cd01557 BCAT_beta_family BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate. The enzyme requires pyridoxal 5'-phosphate (PLP) as a cofactor to catalyze the reaction. It has been found that mammals have two foms of the enzyme - mitochondrial and cytosolic forms while bacteria contain only one form of the enzyme. The mitochondrial form plays a significant role in skeletal muscle glutamine and alanine synthesis and in interorgan nitrogen metabolism.Members of this subgroup are widely distributed in all three forms of life.
Probab=20.39 E-value=72 Score=25.68 Aligned_cols=57 Identities=9% Similarity=-0.057 Sum_probs=35.6
Q ss_pred HHHhhCCCceEEEccccC-ccCchHHHhhCCCCCcccEEEeCCccc----cchHHHHHHHHhh
Q 027575 21 ALKLKGVPFEFVEEDVFS-NEKSALLLKYNPVHKKIPVLVHGEKPV----CDSMVILEYIEEM 78 (221)
Q Consensus 21 ~l~~~gi~~~~~~v~~~~-~~~~~~~~~~~p~~g~vP~L~~~~~~i----~es~~I~~yL~~~ 78 (221)
++...|++++...+.+.. ....+-|..-+.. |-+||-..|+..+ .....|++.|.+.
T Consensus 211 ~~~~~Gi~v~e~~i~~~~l~~ade~f~~ns~~-gi~pV~~i~~~~~~~~~~~~gp~~~~l~~~ 272 (279)
T cd01557 211 LARDLGIKVEERPITRDELYEADEVFATGTAA-VVTPVGEIDYRGKEPGEGEVGPVTKKLYDL 272 (279)
T ss_pred HHHHcCCeEEEEeCCHHHHhhCCEEEEeccee-EEEEEEEEccccccCCCCCCCHHHHHHHHH
Confidence 456679999998887752 2222333333344 7899999888766 3445566665443
No 250
>PF01552 Pico_P2B: Picornavirus 2B protein; InterPro: IPR002527 Poliovirus infection leads to drastic alterations in membrane permeability late during infection. Proteins 2B and 2BC enhance membrane permeability [, ].; GO: 0000166 nucleotide binding, 0003968 RNA-directed RNA polymerase activity, 0005198 structural molecule activity, 0008233 peptidase activity, 0008234 cysteine-type peptidase activity, 0016740 transferase activity, 0016779 nucleotidyltransferase activity, 0016787 hydrolase activity, 0018144 RNA-protein covalent cross-linking, 0019012 virion
Probab=20.38 E-value=78 Score=21.35 Aligned_cols=27 Identities=30% Similarity=0.395 Sum_probs=20.8
Q ss_pred EEeccCCChhHHHHHHHHHhhCCCceE
Q 027575 5 KLLGTLPSPFVYRVIWALKLKGVPFEF 31 (221)
Q Consensus 5 ~Ly~~~~sp~~~~~~~~l~~~gi~~~~ 31 (221)
.|.|.+.|||.+.-.=++...|+||-.
T Consensus 70 aLLGcd~sPw~~LK~Kvc~~lgi~~~~ 96 (99)
T PF01552_consen 70 ALLGCDGSPWRWLKSKVCKWLGIPYAE 96 (99)
T ss_pred HHhccCCCHHHHHHHHHHhHhCCchHh
Confidence 455777888888888888888888743
No 251
>cd03006 PDI_a_EFP1_N PDIa family, N-terminal EFP1 subfamily; EFP1 is a binding partner protein of thyroid oxidase (ThOX), also called Duox. ThOX proteins are responsible for the generation of hydrogen peroxide, a crucial substrate of thyroperoxidase, which functions to iodinate thyroglobulin and synthesize thyroid hormones. EFP1 was isolated through a yeast two-hybrid method using the EF-hand fragment of dog Duox1 as a bait. It could be one of the partners in the assembly of a multiprotein complex constituting the thyroid hydrogen peroxide generating system. EFP1 contains two TRX domains related to the redox active TRX domains of protein disulfide isomerase (PDI). This subfamily is composed of the N-terminal TRX domain of EFP1, which contains a CXXS sequence in place of the typical CXXC motif, similar to ERp44. The CXXS motif allows the formation of stable mixed disulfides, crucial for the ER-retention function of ERp44.
Probab=20.37 E-value=2.4e+02 Score=19.21 Aligned_cols=55 Identities=7% Similarity=-0.098 Sum_probs=31.9
Q ss_pred eEEeccCCChhHHHHHHHHHhhCCC----ceEEEccccCccCchHHH--hhCCCCCcccEEEe--CCc
Q 027575 4 VKLLGTLPSPFVYRVIWALKLKGVP----FEFVEEDVFSNEKSALLL--KYNPVHKKIPVLVH--GEK 63 (221)
Q Consensus 4 ~~Ly~~~~sp~~~~~~~~l~~~gi~----~~~~~v~~~~~~~~~~~~--~~~p~~g~vP~L~~--~~~ 63 (221)
+..|+.++|+.|+...-.+....-. .....||.. . ...+. +.+- ..+|++.. +|.
T Consensus 33 lV~FyA~WC~~Ck~l~p~~~~la~~~~~~v~~~~Vd~d--~-~~~l~~~~~~I--~~~PTl~lf~~g~ 95 (113)
T cd03006 33 LVMYYAPWDAQSQAARQEFEQVAQKLSDQVLFVAINCW--W-PQGKCRKQKHF--FYFPVIHLYYRSR 95 (113)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECC--C-ChHHHHHhcCC--cccCEEEEEECCc
Confidence 4577889999999876655554322 334555543 2 23333 2344 35898883 543
Done!