BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027577
(221 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q07511|FDH_SOLTU Formate dehydrogenase, mitochondrial OS=Solanum tuberosum GN=FDH1
PE=1 SV=2
Length = 381
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 196/223 (87%), Positives = 210/223 (94%), Gaps = 2/223 (0%)
Query: 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNC 60
MRILILVRNFLPGHHQVI+GEWNVA +A+RAYDLEGKTVGTVG GRIG+LLLQRLKPFNC
Sbjct: 159 MRILILVRNFLPGHHQVINGEWNVAAIAHRAYDLEGKTVGTVGAGRIGRLLLQRLKPFNC 218
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
NLLYHDR+KMD +LE + GAKFEEDLD ML KCDIVV+NTPLTEKT+GMFDK+RIAK+KK
Sbjct: 219 NLLYHDRLKMDSELENQIGAKFEEDLDKMLSKCDIVVINTPLTEKTKGMFDKERIAKLKK 278
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
GVLIVNNARGAIMDTQAVVDAC+SGHIAGYSGDVW PQPAPKDHPWRYMPNQAMTPH+SG
Sbjct: 279 GVLIVNNARGAIMDTQAVVDACNSGHIAGYSGDVWYPQPAPKDHPWRYMPNQAMTPHISG 338
Query: 181 TTID--LRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAPQYR 221
TTID LRYAAG KDMLDRYFKGEDFP +NYIVK GELAPQYR
Sbjct: 339 TTIDAQLRYAAGTKDMLDRYFKGEDFPAENYIVKDGELAPQYR 381
>sp|Q9SXP2|FDH1_ORYSJ Formate dehydrogenase 1, mitochondrial OS=Oryza sativa subsp.
japonica GN=Os06g0486800 PE=1 SV=2
Length = 376
Score = 414 bits (1063), Expect = e-115, Method: Compositional matrix adjust.
Identities = 190/223 (85%), Positives = 209/223 (93%), Gaps = 2/223 (0%)
Query: 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNC 60
MRILIL+RNFLPG+ QV+ GEWNVAG+AYRAYDLEGKTVGTVG GRIG+LLLQRLKPFNC
Sbjct: 154 MRILILLRNFLPGYQQVVHGEWNVAGIAYRAYDLEGKTVGTVGAGRIGRLLLQRLKPFNC 213
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
NLLYHDR+K+DP+LEKE GAK+EEDLD MLPKCD++V+NTPLTEKTRGMF+K+RIAKMKK
Sbjct: 214 NLLYHDRLKIDPELEKEIGAKYEEDLDAMLPKCDVIVINTPLTEKTRGMFNKERIAKMKK 273
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
GV+IVNNARGAIMDTQAV DACSSG +AGY GDVW PQPAPKDHPWRYMPN AMTPH+SG
Sbjct: 274 GVIIVNNARGAIMDTQAVADACSSGQVAGYGGDVWFPQPAPKDHPWRYMPNHAMTPHISG 333
Query: 181 TTID--LRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAPQYR 221
TTID LRYAAGVKDMLDRYFKGEDFPVQNYIVK G+LA QY+
Sbjct: 334 TTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKEGQLASQYQ 376
>sp|Q67U69|FDH2_ORYSJ Formate dehydrogenase 2, mitochondrial OS=Oryza sativa subsp.
japonica GN=Os06g0486900 PE=2 SV=1
Length = 378
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 188/223 (84%), Positives = 208/223 (93%), Gaps = 2/223 (0%)
Query: 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNC 60
MRIL+L+RNFLPGHHQ+++GEWNVAG+A+R YDLEGKTVGTVG GRIG+LLLQRLKPFNC
Sbjct: 156 MRILLLLRNFLPGHHQIVNGEWNVAGIAHRTYDLEGKTVGTVGAGRIGRLLLQRLKPFNC 215
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
NL+YHDRVK+DP+LEKE GAK+EEDLD MLPKCD+VV+N PLTEKTRGMF+K+RIAKMKK
Sbjct: 216 NLMYHDRVKIDPELEKEIGAKYEEDLDAMLPKCDVVVINMPLTEKTRGMFNKERIAKMKK 275
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
GV IVNNARGAIMDTQAV DAC+SGH+AGY GDVW PQPAPKDHPWRYMPN AMTPH SG
Sbjct: 276 GVTIVNNARGAIMDTQAVADACASGHVAGYGGDVWFPQPAPKDHPWRYMPNHAMTPHCSG 335
Query: 181 TTID--LRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAPQYR 221
TTID LRYAAGVKDMLDRYFKGEDFP QNYIVKAG+LA QY+
Sbjct: 336 TTIDGQLRYAAGVKDMLDRYFKGEDFPAQNYIVKAGQLASQYQ 378
>sp|Q9ZRI8|FDH_HORVU Formate dehydrogenase, mitochondrial OS=Hordeum vulgare PE=2 SV=1
Length = 377
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 188/223 (84%), Positives = 209/223 (93%), Gaps = 2/223 (0%)
Query: 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNC 60
MRILIL+RNFLPG+ QV+ GEWNVAG+A+RAYDLEGKTVGTVG GR G+LLLQRLKPFNC
Sbjct: 155 MRILILLRNFLPGYQQVVKGEWNVAGIAHRAYDLEGKTVGTVGAGRYGRLLLQRLKPFNC 214
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
NLLYHDR++++P+LEKE GAKFEEDLD MLPKCD+VV+NTPLTEKTRGMF+K++IAKMKK
Sbjct: 215 NLLYHDRLQINPELEKEIGAKFEEDLDAMLPKCDVVVINTPLTEKTRGMFNKEKIAKMKK 274
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
GV+IVNNARGAIMDTQAV DACSSGHIAGY GDVW PQPAPKDHPWRYMPN AMTPH+SG
Sbjct: 275 GVIIVNNARGAIMDTQAVADACSSGHIAGYGGDVWFPQPAPKDHPWRYMPNHAMTPHISG 334
Query: 181 TTID--LRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAPQYR 221
TTID LRYAAGVKDMLDRYFKGE+FPV+NYIVK GELA QY+
Sbjct: 335 TTIDAQLRYAAGVKDMLDRYFKGEEFPVENYIVKEGELASQYK 377
>sp|Q9S7E4|FDH_ARATH Formate dehydrogenase, mitochondrial OS=Arabidopsis thaliana
GN=FDH1 PE=1 SV=1
Length = 384
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 183/223 (82%), Positives = 204/223 (91%), Gaps = 2/223 (0%)
Query: 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNC 60
MRILIL+RNF+PG++QV+ GEWNVAG+AYRAYDLEGKT+GTVG GRIGKLLLQRLKPF C
Sbjct: 162 MRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGC 221
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
NLLYHDR++M P+LEKETGAKF EDL+ MLPKCD++V+N PLTEKTRGMF+K+ I K+KK
Sbjct: 222 NLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKK 281
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
GVLIVNNARGAIM+ QAVVDA SGHI GYSGDVW+PQPAPKDHPWRYMPNQAMTPH SG
Sbjct: 282 GVLIVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSG 341
Query: 181 TTID--LRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAPQYR 221
TTID LRYAAG KDML+RYFKGEDFP +NYIVK GELAPQYR
Sbjct: 342 TTIDAQLRYAAGTKDMLERYFKGEDFPTENYIVKDGELAPQYR 384
>sp|Q03134|FDH_EMENI Probable formate dehydrogenase OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=aciA
PE=2 SV=3
Length = 365
Score = 240 bits (613), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/228 (52%), Positives = 160/228 (70%), Gaps = 9/228 (3%)
Query: 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNC 60
M IL+LVRNF+P H Q+ +G+WNVA VA +DLE K VGTVG GRIG+ +L+RLKPF+C
Sbjct: 130 MTILLLVRNFVPAHDQIRNGDWNVAAVAKNEFDLENKVVGTVGVGRIGERVLRRLKPFDC 189
Query: 61 -NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMK 119
LLY+D + P++EKE GA+ + L+ M+ +CD+V +N PL EKTRG+F+K+ I+KMK
Sbjct: 190 KELLYYDYQPLRPEVEKEIGARRVDSLEEMVSQCDVVTINCPLHEKTRGLFNKELISKMK 249
Query: 120 KGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPN-----QAM 174
G +VN ARGAI+ + V +A SGH+ GY GDVW PQPAPK+HP RY + A
Sbjct: 250 PGSWLVNTARGAIVVKEDVAEALKSGHLRGYGGDVWFPQPAPKEHPLRYAEHPWGGGNAT 309
Query: 175 TPHVSGTTID--LRYAAGVKDMLDRYFKGE-DFPVQNYIVKAGELAPQ 219
PH+SGT+ID +RYA G K +LD YF G D+ Q+ IV G+ A +
Sbjct: 310 VPHMSGTSIDAQIRYANGTKAILDSYFSGRFDYQPQDLIVHGGDYATK 357
>sp|O13437|FDH_CANBO Formate dehydrogenase OS=Candida boidinii GN=FDH1 PE=1 SV=1
Length = 364
Score = 218 bits (555), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/224 (48%), Positives = 152/224 (67%), Gaps = 9/224 (4%)
Query: 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFN- 59
M +L+LVRNF+P H Q+I+ +W VA +A AYD+EGKT+ T+G GRIG +L+RL PFN
Sbjct: 129 MTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTIATIGAGRIGYRVLERLLPFNP 188
Query: 60 CNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMK 119
LLY+D + + E++ GA+ E+++ ++ + DIV VN PL T+G+ +K+ ++K K
Sbjct: 189 KELLYYDYQALPKEAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFK 248
Query: 120 KGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQ-----AM 174
KG +VN ARGAI + V A SG + GY GDVW PQPAPKDHPWR M N+ AM
Sbjct: 249 KGAWLVNTARGAICVAEDVAAALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAM 308
Query: 175 TPHVSGTTID--LRYAAGVKDMLDRYFKGE-DFPVQNYIVKAGE 215
TPH SGTT+D RYA G K++L+ +F G+ D+ Q+ I+ GE
Sbjct: 309 TPHYSGTTLDAQTRYAEGTKNILESFFTGKFDYRPQDIILLNGE 352
>sp|Q07103|FDH_NEUCR Formate dehydrogenase OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fdh
PE=2 SV=1
Length = 375
Score = 213 bits (543), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 116/228 (50%), Positives = 156/228 (68%), Gaps = 9/228 (3%)
Query: 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNC 60
M IL+LVRNF+P H Q+ G W+VA A +DLEGK VGTVG GRIG+ +L+RLKPF+C
Sbjct: 130 MTILVLVRNFVPAHEQIQEGRWDVAEAAKNEFDLEGKVVGTVGVGRIGERVLRRLKPFDC 189
Query: 61 -NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMK 119
LLY+D + + E E G + DL+ ML +CD+V +N PL EKT+G+F+K+ I+KMK
Sbjct: 190 KELLYYDYQPLSAEKEAEIGCRRVADLEEMLAQCDVVTINCPLHEKTQGLFNKELISKMK 249
Query: 120 KGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPN-----QAM 174
KG +VN ARGAI+ + V +A SGH+ GY GDVW PQPAP+DHP RY N AM
Sbjct: 250 KGSWLVNTARGAIVVKEDVAEALKSGHLRGYGGDVWFPQPAPQDHPLRYAKNPFGGGNAM 309
Query: 175 TPHVSGTTIDL--RYAAGVKDMLDRYFKGE-DFPVQNYIVKAGELAPQ 219
PH+SGT++D RYAAG K +++ Y G+ D+ ++ IV G+ A +
Sbjct: 310 VPHMSGTSLDAQKRYAAGTKAIIESYLSGKHDYRPEDLIVYGGDYATK 357
>sp|P33160|FDH_PSESR Formate dehydrogenase OS=Pseudomonas sp. (strain 101) PE=1 SV=3
Length = 401
Score = 210 bits (535), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 135/219 (61%), Gaps = 2/219 (0%)
Query: 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNC 60
M IL LVRN+LP H G WN+A AYDLE VGTV GRIG +L+RL PF+
Sbjct: 157 MMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPFDV 216
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+L Y DR ++ +EKE + + M P CD+V +N PL +T M + + + K+
Sbjct: 217 HLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKR 276
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
G IVN ARG + D AV A SG +AGY+GDVW PQPAPKDHPWR MP MTPH+SG
Sbjct: 277 GAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISG 336
Query: 181 TTI--DLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELA 217
TT+ RYAAG +++L+ +F+G + IV+ G LA
Sbjct: 337 TTLTAQARYAAGTREILECFFEGRPIRDEYLIVQGGALA 375
>sp|P33677|FDH_PICAN Formate dehydrogenase OS=Pichia angusta GN=FMDH PE=3 SV=2
Length = 362
Score = 203 bits (517), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 145/224 (64%), Gaps = 9/224 (4%)
Query: 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFN- 59
M +L+LVRNF+P H Q+ISG WNVA +A ++D+EGK + T+G GRIG +L+RL FN
Sbjct: 129 MTMLVLVRNFVPAHEQIISGGWNVAEIAKDSFDIEGKVIATIGAGRIGYRVLERLVAFNP 188
Query: 60 CNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMK 119
LLY+D + + E++ GA+ D+ ++ + DIV +N PL ++G+ + + + K
Sbjct: 189 KELLYYDYQSLSKEAEEKVGARRVHDIKELVAQADIVTINCPLHAGSKGLVNAELLKHFK 248
Query: 120 KGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQ-----AM 174
KG +VN ARGAI + V A SG + GY GDVW PQPAPKDHPWR M N+ AM
Sbjct: 249 KGAWLVNTARGAICVAEDVAAAVKSGQLRGYGGDVWFPQPAPKDHPWRSMANKYGAGNAM 308
Query: 175 TPHVSGTTID--LRYAAGVKDMLDRYFKGE-DFPVQNYIVKAGE 215
TPH SG+ ID +RYA G K++L+ +F + D+ Q+ I+ G+
Sbjct: 309 TPHYSGSVIDAQVRYAQGTKNILESFFTQKFDYRPQDIILLNGK 352
>sp|C8ZHD6|FDH2_YEAS8 Formate dehydrogenase 2 OS=Saccharomyces cerevisiae (strain Lalvin
EC1118 / Prise de mousse) GN=FDH2 PE=2 SV=1
Length = 376
Score = 199 bits (506), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 149/238 (62%), Gaps = 21/238 (8%)
Query: 3 ILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFN-CN 61
IL+L+RN+ GH Q I+GEW++AGVA YDLE K + TVG GRIG +L+RL FN
Sbjct: 133 ILVLIRNYNGGHQQAINGEWDIAGVAKNEYDLEDKIISTVGAGRIGYRVLERLVAFNPKK 192
Query: 62 LLYHD----------RVKMDPQLEKETGAKFE--EDLDTMLPKCDIVVVNTPLTEKTRGM 109
LLY+D R+ +L G + E L+ M+ + D+V +N PL + +RG+
Sbjct: 193 LLYYDYQELPAEAINRLNEASKLFNGRGDIVQRVEKLEDMVAQSDVVTINCPLHKDSRGL 252
Query: 110 FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYM 169
F+K I+ MK G +VN ARGAI + V +A SG +AGY GDVW+ QPAPKDHPWR M
Sbjct: 253 FNKKLISHMKDGAYLVNTARGAICVAEDVAEAVKSGKLAGYGGDVWDKQPAPKDHPWRTM 312
Query: 170 PNQ-----AMTPHVSGTTIDL--RYAAGVKDMLDRYF-KGEDFPVQNYIVKAGELAPQ 219
N+ AMT H+SGT++D RYA GVK++L+ YF K D+ Q+ IV+ G A +
Sbjct: 313 DNKDHVGNAMTVHISGTSLDAQKRYAQGVKNILNSYFSKKFDYRPQDIIVQNGSYATR 370
>sp|A6ZN46|FDH2_YEAS7 Formate dehydrogenase 2 OS=Saccharomyces cerevisiae (strain YJM789)
GN=FDH1 PE=2 SV=1
Length = 376
Score = 199 bits (506), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 149/238 (62%), Gaps = 21/238 (8%)
Query: 3 ILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFN-CN 61
IL+L+RN+ GH Q I+GEW++AGVA YDLE K + TVG GRIG +L+RL FN
Sbjct: 133 ILVLIRNYNGGHQQAINGEWDIAGVAKNEYDLEDKIISTVGAGRIGYRVLERLVAFNPKK 192
Query: 62 LLYHD----------RVKMDPQLEKETGAKFE--EDLDTMLPKCDIVVVNTPLTEKTRGM 109
LLY+D R+ +L G + E L+ M+ + D+V +N PL + +RG+
Sbjct: 193 LLYYDYQELPAEAINRLNEASKLFNGRGDIVQRVEKLEDMVAQSDVVTINCPLHKDSRGL 252
Query: 110 FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYM 169
F+K I+ MK G +VN ARGAI + V +A SG +AGY GDVW+ QPAPKDHPWR M
Sbjct: 253 FNKKLISHMKDGAYLVNTARGAICVAEDVAEAVKSGKLAGYGGDVWDKQPAPKDHPWRTM 312
Query: 170 PNQ-----AMTPHVSGTTIDL--RYAAGVKDMLDRYF-KGEDFPVQNYIVKAGELAPQ 219
N+ AMT H+SGT++D RYA GVK++L+ YF K D+ Q+ IV+ G A +
Sbjct: 313 DNKDHVGNAMTVHISGTSLDAQKRYAQGVKNILNSYFSKKFDYRPQDIIVQNGSYATR 370
>sp|Q08911|FDH1_YEAST Formate dehydrogenase 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=FDH1 PE=2 SV=1
Length = 376
Score = 199 bits (506), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 149/238 (62%), Gaps = 21/238 (8%)
Query: 3 ILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFN-CN 61
IL+L+RN+ GH Q I+GEW++AGVA YDLE K + TVG GRIG +L+RL FN
Sbjct: 133 ILVLIRNYNGGHQQAINGEWDIAGVAKNEYDLEDKIISTVGAGRIGYRVLERLVAFNPKK 192
Query: 62 LLYHD----------RVKMDPQLEKETGAKFE--EDLDTMLPKCDIVVVNTPLTEKTRGM 109
LLY+D R+ +L G + E L+ M+ + D+V +N PL + +RG+
Sbjct: 193 LLYYDYQELPAEAINRLNEASKLFNGRGDIVQRVEKLEDMVAQSDVVTINCPLHKDSRGL 252
Query: 110 FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYM 169
F+K I+ MK G +VN ARGAI + V +A SG +AGY GDVW+ QPAPKDHPWR M
Sbjct: 253 FNKKLISHMKDGAYLVNTARGAICVAEDVAEAVKSGKLAGYGGDVWDKQPAPKDHPWRTM 312
Query: 170 PNQ-----AMTPHVSGTTIDL--RYAAGVKDMLDRYF-KGEDFPVQNYIVKAGELAPQ 219
N+ AMT H+SGT++D RYA GVK++L+ YF K D+ Q+ IV+ G A +
Sbjct: 313 DNKDHVGNAMTVHISGTSLDAQKRYAQGVKNILNSYFSKKFDYRPQDIIVQNGSYATR 370
>sp|P0CF35|FDH2_YEAST Putative formate dehydrogenase 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=FDH2 PE=5 SV=1
Length = 236
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 126/209 (60%), Gaps = 21/209 (10%)
Query: 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFN-CNLLYHD----------RVKMDPQLEKETGA 80
YDLE K + TVG GRIG +L+RL FN LLY+D R+ +L G
Sbjct: 22 YDLEDKIISTVGAGRIGYRVLERLVAFNPKKLLYYDYQELPAEAINRLNEASKLFNGRGD 81
Query: 81 KFE--EDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAV 138
+ E L+ M+ + D+V +N PL + +RG+F+K I+ MK G +VN ARGAI + V
Sbjct: 82 IVQRVEKLEDMVAQSDVVTINCPLHKDSRGLFNKKLISHMKDGAYLVNTARGAICVAEDV 141
Query: 139 VDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQ-----AMTPHVSGTTIDL--RYAAGV 191
+A SG +AGY GDVW+ QPAPKDHPWR M N+ AMT H+SGT++ RYA GV
Sbjct: 142 AEAVKSGKLAGYGGDVWDKQPAPKDHPWRTMDNKDHVGNAMTVHISGTSLHAQKRYAQGV 201
Query: 192 KDMLDRYF-KGEDFPVQNYIVKAGELAPQ 219
K++L+ YF K D+ Q+ IV+ G A +
Sbjct: 202 KNILNSYFSKKFDYRPQDIIVQNGSYATR 230
>sp|Q8U3Y2|GYAR_PYRFU Glyoxylate reductase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=gyaR PE=3 SV=1
Length = 336
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 111/191 (58%), Gaps = 8/191 (4%)
Query: 3 ILILVRNFLPGHHQVISGEWNVAGVAYR-----AYDLEGKTVGTVGCGRIGKLLLQRLKP 57
+L R+ + G V SGEW G+A+ Y+L GKT+G VG GRIG+ + +R K
Sbjct: 112 LLATARHVVKGDKFVRSGEWKRKGIAWHPKWFLGYELYGKTIGIVGFGRIGQAIARRAKG 171
Query: 58 FNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAK 117
FN +LY+ R + Q EKE GA++ L+ +L + D V++ PLT++T M +++R+
Sbjct: 172 FNMRILYYSRTR-KSQAEKELGAEYR-PLEEVLKESDFVILAVPLTKETMYMINEERLKL 229
Query: 118 MKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPH 177
MK ++VN ARG ++DT+A++ A G IAG DV+ +P + + + N +TPH
Sbjct: 230 MKPTAILVNIARGKVVDTKALIKALKEGWIAGAGLDVFEEEPYYNEELFS-LDNVVLTPH 288
Query: 178 VSGTTIDLRYA 188
+ T + R A
Sbjct: 289 IGSATFEAREA 299
>sp|A1RYE4|GYAR_THEPD Glyoxylate reductase OS=Thermofilum pendens (strain Hrk 5) GN=gyaR
PE=3 SV=1
Length = 339
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 110/188 (58%), Gaps = 7/188 (3%)
Query: 3 ILILVRNFLPGHHQVISGEWNVAGVAY--RAYDLEGKTVGTVGCGRIGKLLLQRLKPFNC 60
IL + R + + +G+W+ Y +L+GKT+G VG GRIG +RL F+
Sbjct: 114 ILAVTRRIVEADKIIRTGQWDKPWNPYFLTGPELKGKTIGLVGLGRIGVATAKRLSSFDV 173
Query: 61 NLLYHDRVKMDPQLEKETGAKFEE--DLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKM 118
+LY+D ++ + + ET E DLDT+L K DIV ++ PLT++T + +++R+ KM
Sbjct: 174 KILYYD---IERRWDVETVIPNMEFTDLDTLLEKSDIVSIHVPLTKETYHLINEERLRKM 230
Query: 119 KKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHV 178
KK ++N ARG ++DT+A+V A G IAG + DV+ +P P +HP N + PH+
Sbjct: 231 KKTAYLINTARGPVVDTEALVKALKEGWIAGAALDVFEQEPLPPNHPLTKFDNVVLAPHI 290
Query: 179 SGTTIDLR 186
+ TI+ R
Sbjct: 291 ASATIEAR 298
>sp|B6YWH0|GYAR_THEON Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1)
GN=gyaR PE=3 SV=1
Length = 334
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 117/211 (55%), Gaps = 13/211 (6%)
Query: 3 ILILVRNFLPGHHQVISGEWNVAGVAYR-----AYDLEGKTVGTVGCGRIGKLLLQRLKP 57
+L R + V SGEW GVA+ YD+ G+T+G VG GRIG+ + +R K
Sbjct: 112 LLATARRLIEADKFVRSGEWKKRGVAWHPLMFLGYDVYGRTIGIVGFGRIGQAIARRAKG 171
Query: 58 FNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAK 117
F +LY+ R + P++EKE GA+F LD +L + D VV+ PLT++T M +++R+
Sbjct: 172 FGMRILYNSRTR-KPEVEKELGAEFM-PLDELLKESDFVVLVVPLTKETYHMINEERLKL 229
Query: 118 MKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPH 177
MK ++VN ARG ++DT+A+V A G IAG DV+ +P + + + N + PH
Sbjct: 230 MKPTAILVNIARGKVVDTEALVKALREGWIAGAGLDVFEEEPYYHEELFS-LDNVVLAPH 288
Query: 178 VSGTTIDLRYAAGVKDMLDR---YFKGEDFP 205
+ T R G+ +++ R FK + P
Sbjct: 289 IGSATYGAR--EGMAELVARNLIAFKNGEVP 317
>sp|P53839|GOR1_YEAST Glyoxylate reductase 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=GOR1 PE=1 SV=1
Length = 350
Score = 120 bits (301), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 98/161 (60%), Gaps = 7/161 (4%)
Query: 3 ILILVRNFLPGHHQVISGEWNVAGVAYRA---YDLEGKTVGTVGCGRIGKLLLQRLKPFN 59
+L +RNF G+ ++I G W AG A + YD EGKTVG +G GRIG+ +L+RLKPF
Sbjct: 127 LLGALRNFGIGNRRLIEGNWPEAGPACGSPFGYDPEGKTVGILGLGRIGRCILERLKPFG 186
Query: 60 C-NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKM 118
N +YH+R ++ E+E G ++ + L + DIV VN PL T + + + I KM
Sbjct: 187 FENFIYHNRHQLPS--EEEHGCEYV-GFEEFLKRSDIVSVNVPLNHNTHHLINAETIEKM 243
Query: 119 KKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQP 159
K GV+IVN ARGA++D QA+ DA SG I DV+ +P
Sbjct: 244 KDGVVIVNTARGAVIDEQAMTDALRSGKIRSAGLDVFEYEP 284
>sp|P35136|SERA_BACSU D-3-phosphoglycerate dehydrogenase OS=Bacillus subtilis (strain
168) GN=serA PE=3 SV=3
Length = 525
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 116/210 (55%), Gaps = 15/210 (7%)
Query: 6 LVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYH 65
L+R+ + V S EWN AY +L GKT+G VG GRIG + QR + F +
Sbjct: 110 LMRHIPQANISVKSREWN--RTAYVGSELYGKTLGIVGLGRIGSEIAQRARAFGMTVHV- 166
Query: 66 DRVKMDPQLEKETGAKF---EEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGV 122
DP L +E K + +L DI+ V+TPLT++T+G+ +K+ IAK KKGV
Sbjct: 167 ----FDPFLTEERAKKIGVNSRTFEEVLESADIITVHTPLTKETKGLLNKETIAKTKKGV 222
Query: 123 LIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTT 182
++N ARG I+D A+++A +GH+AG + DV+ +P P D+ P TPH+ +T
Sbjct: 223 RLINCARGGIIDEAALLEALENGHVAGAALDVFEVEP-PVDNKLVDHPLVIATPHLGAST 281
Query: 183 ID--LRYAAGVKDMLDRYFKGEDFPVQNYI 210
+ L AA V + + ++ KG PV + I
Sbjct: 282 KEAQLNVAAQVSEEVLQFAKG--LPVMSAI 309
>sp|B7LTG7|GHRB_ESCF3 Glyoxylate/hydroxypyruvate reductase B OS=Escherichia fergusonii
(strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=ghrB
PE=3 SV=1
Length = 324
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 106/203 (52%), Gaps = 6/203 (2%)
Query: 3 ILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNC 60
IL R + +V +GEW + G + D+ KT+G VG GRIG L QR FN
Sbjct: 111 ILATSRRVVEVAERVKAGEWTASIGPDWFGSDVHHKTLGIVGMGRIGMALAQRAHFGFNM 170
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+LY+ R + PQ E+ A++ DLDT+L + D V + PLTE+T +F ++ AKMK
Sbjct: 171 PILYNAR-RQHPQAEERFNARYC-DLDTLLQEADFVCLILPLTEETHHLFGAEQFAKMKS 228
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
+ +N RG ++D +A++ A G I DV+ +P P D P MPN PH+
Sbjct: 229 SAIFINAGRGPVVDEKALISALQKGEIHAAGLDVFEREPLPVDSPLLAMPNVVALPHIGS 288
Query: 181 TTIDLRY--AAGVKDMLDRYFKG 201
T + RY AA D L +G
Sbjct: 289 ATHETRYNMAACAVDNLIAALQG 311
>sp|Q5JEZ2|GYAR_PYRKO Glyoxylate reductase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=gyaR PE=3 SV=1
Length = 333
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 118/211 (55%), Gaps = 13/211 (6%)
Query: 3 ILILVRNFLPGHHQVISGEWNVAGVAYR-----AYDLEGKTVGTVGCGRIGKLLLQRLKP 57
+L R + H SGEW G+A+ YD+ GKT+G VG GRIG+ + +R +
Sbjct: 112 LLATARRLIEADHFTRSGEWKRRGIAWHPRWFLGYDVYGKTIGIVGFGRIGQAVARRARG 171
Query: 58 FNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAK 117
F +LY+ R + P+ EKE GA+F L+ +L + D VV+ PLT++T+ M +++R+
Sbjct: 172 FGMRILYYSRSR-KPEAEKELGAEFR-SLEDLLRESDFVVLAVPLTKETQYMINEERLRL 229
Query: 118 MKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPH 177
MKK ++VN ARG ++DT+A++ A G IAG DV+ +P + + + N + PH
Sbjct: 230 MKKTAILVNIARGKVVDTKALMKALKEGWIAGAGLDVYEEEPYYNEELFS-LKNVVLAPH 288
Query: 178 VSGTTIDLRYAAGVKDMLDR---YFKGEDFP 205
+ T R G+ +++ R FK + P
Sbjct: 289 IGSATYGAR--EGMAELVARNLIAFKNGEVP 317
>sp|Q58424|SERA_METJA D-3-phosphoglycerate dehydrogenase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=serA PE=3 SV=1
Length = 524
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 114/206 (55%), Gaps = 14/206 (6%)
Query: 3 ILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNL 62
+L RN + GEW+ ++ +L GKT+G +G GRIG+ +++R K F N+
Sbjct: 108 MLAAARNIPQATASLKRGEWDRK--RFKGIELYGKTLGVIGLGRIGQQVVKRAKAFGMNI 165
Query: 63 LYHDRVKMDPQLEKET----GAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKM 118
+ +D P + KE G + +D++ + + D + ++ PLT KTR + +++IA M
Sbjct: 166 IGYD-----PYIPKEVAESMGVELVDDINELCKRADFITLHVPLTPKTRHIIGREQIALM 220
Query: 119 KKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHV 178
KK +IVN ARG ++D +A+ +A G I + DV+ +P PKD+P + N TPH
Sbjct: 221 KKNAIIVNCARGGLIDEKALYEALKEGKIRAAALDVFEEEP-PKDNPLLTLDNVIGTPHQ 279
Query: 179 SGTTIDLRYAAG--VKDMLDRYFKGE 202
+T + + AAG V + + + +GE
Sbjct: 280 GASTEEAQKAAGTIVAEQIKKVLRGE 305
>sp|B5XMZ4|GHRB_KLEP3 Glyoxylate/hydroxypyruvate reductase B OS=Klebsiella pneumoniae
(strain 342) GN=ghrB PE=3 SV=1
Length = 323
Score = 114 bits (286), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 106/199 (53%), Gaps = 7/199 (3%)
Query: 3 ILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNC 60
+L R + +V +GEW + G + D+ KT+G VG GRIG L QR F
Sbjct: 111 VLSTARRVVEVAERVKAGEWTKSIGPDWFGSDVHHKTLGIVGMGRIGMALAQRAHFGFGM 170
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+LY+ R + PQ E+ A++ DLDT+L + D V + PL+E+T +F + + AKMK
Sbjct: 171 PILYNAR-RQHPQAEERFNARYC-DLDTLLQEADFVCLILPLSEETHHLFGQAQFAKMKS 228
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
+ +N RG ++D QA++ A +G I DV+ +P KD P +PN PH+
Sbjct: 229 SAIFINAGRGPVVDEQALIAALQAGEIHAAGLDVFEHEPLAKDSPLLTLPNVVALPHIGS 288
Query: 181 TTIDLRY---AAGVKDMLD 196
T + RY A V +++D
Sbjct: 289 ATHETRYNMAACAVDNLID 307
>sp|A6TFG7|GHRB_KLEP7 Glyoxylate/hydroxypyruvate reductase B OS=Klebsiella pneumoniae
subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
GN=ghrB PE=3 SV=1
Length = 323
Score = 114 bits (285), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 106/199 (53%), Gaps = 7/199 (3%)
Query: 3 ILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNC 60
+L R + +V +GEW + G + D+ KT+G VG GRIG L QR F
Sbjct: 111 VLSTARRVVEVAERVKAGEWTKSIGPDWFGTDVHHKTLGIVGMGRIGMALAQRAHFGFGM 170
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+LY+ R + PQ E+ A++ DLDT+L + D V + PL+E+T +F + + AKMK
Sbjct: 171 PILYNAR-RQHPQAEERFNARYC-DLDTLLQEADFVCLILPLSEETHHLFGQAQFAKMKS 228
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
+ +N RG ++D QA++ A +G I DV+ +P KD P +PN PH+
Sbjct: 229 SAIFINAGRGPVVDEQALIAALQNGEIHAAGLDVFEHEPLAKDSPLLSLPNVVALPHIGS 288
Query: 181 TTIDLRY---AAGVKDMLD 196
T + RY A V +++D
Sbjct: 289 ATHETRYNMAACAVDNLID 307
>sp|Q9C4M5|GYAR_THELI Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1
Length = 331
Score = 114 bits (285), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 10/205 (4%)
Query: 8 RNFLPGHHQVISGEWNVAGVAYR-----AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNL 62
R + V SGEW + V + Y L+GKT+G VG GRIG+ L +R K F +
Sbjct: 117 RRIVEADAFVRSGEWKKSEVGWHPLMFLGYGLKGKTLGIVGFGRIGQALAKRAKGFGMKI 176
Query: 63 LYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGV 122
+Y+ R + P+ E+E GA++ D +T+L + D + ++ PLT++T M + + MK
Sbjct: 177 IYYSRTR-KPEAEEEIGAEYV-DFETLLKESDFISLHVPLTKETYHMIGEKELKLMKPNA 234
Query: 123 LIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTT 182
+++N +RGA++DT A++ A G IAG DV+ +P + ++ + N + PH+ T
Sbjct: 235 ILINTSRGAVVDTNALIKALKEGWIAGAGLDVFEEEPYYNEELFK-LKNVVLAPHIGSAT 293
Query: 183 IDLR--YAAGVKDMLDRYFKGEDFP 205
+ R A V L + KGE P
Sbjct: 294 HEAREGMAELVAKNLIAFAKGEIPP 318
>sp|B1L765|GYAR_KORCO Glyoxylate reductase OS=Korarchaeum cryptofilum (strain OPF8)
GN=gyaR PE=3 SV=1
Length = 332
Score = 114 bits (284), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 114/211 (54%), Gaps = 8/211 (3%)
Query: 8 RNFLPGHHQVISGEWNVA--GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYH 65
R + V G+W VA + YD+ G+T+G VG GRIG + +R K F +LY+
Sbjct: 117 RRVVEADRYVREGKWKVAWHPMMMLGYDVYGRTLGIVGMGRIGAAVARRAKGFGMRILYY 176
Query: 66 DRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIV 125
D ++ + EKE G ++ L+ +L + D V ++ PLTE+T M ++++ +MK+ ++V
Sbjct: 177 DSIRRE-DFEKELGVEYV-PLEKLLEESDFVSLHVPLTEETYHMIGEEQLRRMKRTAILV 234
Query: 126 NNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDL 185
N +RG ++D +A+ A G IAG DV+ +P P D P + N + PH + + +
Sbjct: 235 NTSRGKVVDQKALYKALKEGWIAGAGLDVFEQEPIPPDDPLLKLENVVLAPHAASASHET 294
Query: 186 --RYAAGVKDMLDRYFKGEDFP--VQNYIVK 212
R A V + L + +GE P V +VK
Sbjct: 295 RSRMAEMVAENLIAFKRGEIPPNLVNQEVVK 325
>sp|A8ARD9|GHRB_CITK8 Glyoxylate/hydroxypyruvate reductase B OS=Citrobacter koseri
(strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=ghrB
PE=3 SV=1
Length = 324
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 103/199 (51%), Gaps = 7/199 (3%)
Query: 3 ILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNC 60
+L R + +V GEW + G + D+ KT+G VG GRIG L QR FN
Sbjct: 111 VLSTARRVVEVAERVKVGEWTKSIGPDWFGTDVHHKTLGIVGMGRIGLALAQRAHFGFNM 170
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+LY+ R + P+ E+ A++ DLDT+L D V + PLTE+T +F + AKMK
Sbjct: 171 PILYNAR-RHHPEAEERFNARYC-DLDTLLQAADFVCLILPLTEETHHLFGAAQFAKMKS 228
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
+ +N RG ++D A++ A SG I DV+ +P P D P +PN PH+
Sbjct: 229 SAIFINAGRGPVVDETALIAALQSGEIHAAGLDVFEQEPLPVDSPLLSLPNVVALPHIGS 288
Query: 181 TTIDLRY---AAGVKDMLD 196
T + RY A V +++D
Sbjct: 289 ATHETRYNMAACAVDNLID 307
>sp|Q9YAW4|GYAR_AERPE Glyoxylate reductase OS=Aeropyrum pernix (strain ATCC 700893 / DSM
11879 / JCM 9820 / NBRC 100138 / K1) GN=gyaR PE=3 SV=2
Length = 335
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 113/219 (51%), Gaps = 11/219 (5%)
Query: 3 ILILVRNFLPGHHQVISGEWNVAGVAYR-----AYDLEGKTVGTVGCGRIGKLLLQRLKP 57
IL R + H V GEW + +L GKT+G +G GRIG + + K
Sbjct: 113 ILAAARRVVEADHFVRWGEWWRLRTGWHPMMMLGVELRGKTLGILGMGRIGSRVAEIGKA 172
Query: 58 FNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAK 117
F ++YH R + ++EKE GA++ L+ +L + DI+ ++ PLT++TR + + +
Sbjct: 173 FGMRIIYHSRSR-KREIEKELGAEYR-SLEDLLRESDILSIHLPLTDETRHLIGESELKL 230
Query: 118 MKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPH 177
MKK ++VN RGAI+DT A+V A G IA + DV+ +P +HP N + PH
Sbjct: 231 MKKTAILVNTGRGAIVDTGALVKALREGWIAAAALDVFEEEPLNPNHPLTAFKNVVLAPH 290
Query: 178 VSGTTID--LRYAAGVKDMLDRYFKGEDFP--VQNYIVK 212
+ T + LR A + L + +G+ P V +VK
Sbjct: 291 AASATRETRLRMAMMAAENLVAFAQGKVPPNLVNREVVK 329
>sp|O29445|SERA_ARCFU D-3-phosphoglycerate dehydrogenase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=serA PE=3 SV=1
Length = 527
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 106/208 (50%), Gaps = 4/208 (1%)
Query: 3 ILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNL 62
+L R V G+W + +L GKT G +G GR+G + +R K N+
Sbjct: 108 MLAAARKIPQADRSVKEGKWERK--KFMGIELRGKTAGVIGLGRVGFEVAKRCKALEMNV 165
Query: 63 LYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGV 122
L +D + + ++ G K D DT+L D++ V+ P T++T G+ K + KMK GV
Sbjct: 166 LAYDPF-VSKERAEQIGVKLV-DFDTLLASSDVITVHVPRTKETIGLIGKGQFEKMKDGV 223
Query: 123 LIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTT 182
++VN ARG I+D A+ +A +G +A + DV+ +P D+P + N TPH++ +T
Sbjct: 224 IVVNAARGGIVDEAALYEAIKAGKVAAAALDVYEKEPPSPDNPLLKLDNVVTTPHIAAST 283
Query: 183 IDLRYAAGVKDMLDRYFKGEDFPVQNYI 210
+ + G+ D + PV+N +
Sbjct: 284 REAQLNVGMIIAEDIVNMAKGLPVRNAV 311
>sp|O27051|SERA_METTH D-3-phosphoglycerate dehydrogenase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=serA PE=3 SV=1
Length = 525
Score = 108 bits (270), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 13/204 (6%)
Query: 3 ILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNL 62
+L L R V G+W + +L GKT+G +G GRIG ++ R K F ++
Sbjct: 110 MLALARKIAIADRSVKEGKWEKN--RFMGIELNGKTLGIIGMGRIGSQVVVRTKAFGMDI 167
Query: 63 LYHDRVKMDPQLEKETGAKF---EEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMK 119
+ +D P + KE + DL+T+L + DIV ++ PLT +TR + +D MK
Sbjct: 168 MVYD-----PYISKEAAEEMGVTVTDLETLLRESDIVTIHVPLTPETRHLISEDEFKLMK 222
Query: 120 KGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVS 179
IVN ARG I+D A+ A G IAG + DV+ +P P+ P + N +TPH+
Sbjct: 223 DTAFIVNCARGGIIDEDALYRALKDGEIAGAALDVFEEEP-PEGSPLLELENVVLTPHIG 281
Query: 180 GTTIDLRYAAG--VKDMLDRYFKG 201
+T + + A V + + F+G
Sbjct: 282 ASTSEAQRDAAIIVANEIKTVFQG 305
>sp|A7MKR1|GHRB_CROS8 Glyoxylate/hydroxypyruvate reductase B OS=Cronobacter sakazakii
(strain ATCC BAA-894) GN=ghrB PE=3 SV=1
Length = 324
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 103/204 (50%), Gaps = 6/204 (2%)
Query: 3 ILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNC 60
+L R L +V +GEW + G + D+ KT+G VG GRIG L QR FN
Sbjct: 111 VLTTARRALEVAERVKAGEWTGSIGPDWFGCDVHHKTLGIVGMGRIGLALAQRAHFGFNM 170
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+LY+ R + + E+ A++ DLDT+L + D V V PLT++T M ++ KMKK
Sbjct: 171 PILYNAR-RHHSEAEERFNARYC-DLDTLLAESDFVCVILPLTDETHHMIGAEQFRKMKK 228
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
+ +N RG ++D A++ A SG I DV+ +P KD P M N PH+
Sbjct: 229 SAIFINAGRGPVVDENALIAALQSGEIHAAGLDVFEQEPLSKDSPLLTMKNVVALPHIGS 288
Query: 181 TTIDLRY--AAGVKDMLDRYFKGE 202
T + RY AA D L G+
Sbjct: 289 ATHETRYNMAACAVDNLINALNGD 312
>sp|B4TZ41|GHRB_SALSV Glyoxylate/hydroxypyruvate reductase B OS=Salmonella schwarzengrund
(strain CVM19633) GN=ghrB PE=3 SV=1
Length = 324
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 101/199 (50%), Gaps = 7/199 (3%)
Query: 3 ILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNC 60
+L R + +V +GEW + G A+ D+ KT+G VG GRIG L QR F
Sbjct: 111 MLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTM 170
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+LYH R + + E A++ DLDT+L + D V V PLT +TR +F + A+MK
Sbjct: 171 PVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTAETRHLFGATQFARMKS 228
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
+ +N RG ++D A++ A +G I DV+ +P D P M N PH+
Sbjct: 229 SAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSNVVAVPHIGS 288
Query: 181 TTIDLRY---AAGVKDMLD 196
T + RY A V +++D
Sbjct: 289 ATHETRYNMMACAVDNLID 307
>sp|Q8ZLA1|GHRB_SALTY Glyoxylate/hydroxypyruvate reductase B OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=ghrB PE=3 SV=1
Length = 324
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 101/199 (50%), Gaps = 7/199 (3%)
Query: 3 ILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNC 60
+L R + +V +GEW + G A+ D+ KT+G VG GRIG L QR F
Sbjct: 111 MLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTM 170
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+LYH R + + E A++ DLDT+L + D V V PLT +TR +F + A+MK
Sbjct: 171 PVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTAETRHLFGATQFARMKS 228
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
+ +N RG ++D A++ A +G I DV+ +P D P M N PH+
Sbjct: 229 SAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSNVVAVPHIGS 288
Query: 181 TTIDLRY---AAGVKDMLD 196
T + RY A V +++D
Sbjct: 289 ATHETRYNMMACAVDNLID 307
>sp|B4T938|GHRB_SALHS Glyoxylate/hydroxypyruvate reductase B OS=Salmonella heidelberg
(strain SL476) GN=ghrB PE=3 SV=1
Length = 324
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 101/199 (50%), Gaps = 7/199 (3%)
Query: 3 ILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNC 60
+L R + +V +GEW + G A+ D+ KT+G VG GRIG L QR F
Sbjct: 111 MLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTM 170
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+LYH R + + E A++ DLDT+L + D V V PLT +TR +F + A+MK
Sbjct: 171 PVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTAETRHLFGATQFARMKS 228
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
+ +N RG ++D A++ A +G I DV+ +P D P M N PH+
Sbjct: 229 SAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSNVVAVPHIGS 288
Query: 181 TTIDLRY---AAGVKDMLD 196
T + RY A V +++D
Sbjct: 289 ATHETRYNMMACAVDNLID 307
>sp|B5EX58|GHRB_SALA4 Glyoxylate/hydroxypyruvate reductase B OS=Salmonella agona (strain
SL483) GN=ghrB PE=3 SV=1
Length = 324
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 101/199 (50%), Gaps = 7/199 (3%)
Query: 3 ILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNC 60
+L R + +V +GEW + G A+ D+ KT+G VG GRIG L QR F
Sbjct: 111 MLTTARRVVDVAERVKAGEWTESIGPAWFGIDVHHKTLGIVGMGRIGMALAQRAHFGFTM 170
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+LYH R + + E A++ DLDT+L + D V V PLT +TR +F + A+MK
Sbjct: 171 PVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTAETRHLFGATQFARMKS 228
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
+ +N RG ++D A++ A +G I DV+ +P D P M N PH+
Sbjct: 229 SAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSNVVAVPHIGS 288
Query: 181 TTIDLRY---AAGVKDMLD 196
T + RY A V +++D
Sbjct: 289 ATHETRYNMMACAVDNLID 307
>sp|B4SWJ5|GHRB_SALNS Glyoxylate/hydroxypyruvate reductase B OS=Salmonella newport
(strain SL254) GN=ghrB PE=3 SV=1
Length = 324
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 101/199 (50%), Gaps = 7/199 (3%)
Query: 3 ILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNC 60
+L R + +V +GEW + G A+ D+ KT+G VG GRIG L QR F
Sbjct: 111 MLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTM 170
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+LYH R + + E A++ DLDT+L + D V V PLT +TR +F + A+MK
Sbjct: 171 PVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTAETRHLFGATQFARMKS 228
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
+ +N RG ++D A++ A +G I DV+ +P D P M N PH+
Sbjct: 229 SAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSNVVAVPHIGS 288
Query: 181 TTIDLRY---AAGVKDMLD 196
T + RY A V +++D
Sbjct: 289 ATHETRYNMMACAVDNLID 307
>sp|B5R4N3|GHRB_SALEP Glyoxylate/hydroxypyruvate reductase B OS=Salmonella enteritidis
PT4 (strain P125109) GN=ghrB PE=3 SV=1
Length = 324
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 101/199 (50%), Gaps = 7/199 (3%)
Query: 3 ILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNC 60
+L R + +V +GEW + G A+ D+ KT+G VG GRIG L QR F
Sbjct: 111 MLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTM 170
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+LYH R + + E A++ DLDT+L + D V V PLT +TR +F + A+MK
Sbjct: 171 PVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTAETRHLFGATQFARMKS 228
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
+ +N RG ++D A++ A +G I DV+ +P D P M N PH+
Sbjct: 229 SAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSNVVAVPHIGS 288
Query: 181 TTIDLRY---AAGVKDMLD 196
T + RY A V +++D
Sbjct: 289 ATHETRYNMMACAVDNLID 307
>sp|B5FLC2|GHRB_SALDC Glyoxylate/hydroxypyruvate reductase B OS=Salmonella dublin (strain
CT_02021853) GN=ghrB PE=3 SV=1
Length = 324
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 101/199 (50%), Gaps = 7/199 (3%)
Query: 3 ILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNC 60
+L R + +V +GEW + G A+ D+ KT+G VG GRIG L QR F
Sbjct: 111 MLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTM 170
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+LYH R + + E A++ DLDT+L + D V V PLT +TR +F + A+MK
Sbjct: 171 PVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTAETRHLFGATQFARMKS 228
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
+ +N RG ++D A++ A +G I DV+ +P D P M N PH+
Sbjct: 229 SAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSNVVAVPHIGS 288
Query: 181 TTIDLRY---AAGVKDMLD 196
T + RY A V +++D
Sbjct: 289 ATHETRYNMMACAVDNLID 307
>sp|Q8Z2A8|GHRB_SALTI Glyoxylate/hydroxypyruvate reductase B OS=Salmonella typhi GN=ghrB
PE=3 SV=1
Length = 324
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 101/199 (50%), Gaps = 7/199 (3%)
Query: 3 ILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNC 60
+L R + +V +GEW + G A+ D+ KT+G VG GRIG L QR F
Sbjct: 111 MLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTM 170
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+LYH R + + E A++ DLDT+L + D V V PLT +TR +F + A+MK
Sbjct: 171 PVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTAETRHLFGATQFARMKS 228
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
+ +N RG ++D A++ A +G I DV+ +P D P M N PH+
Sbjct: 229 SAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSNVVAVPHIGS 288
Query: 181 TTIDLRY---AAGVKDMLD 196
T + RY A V +++D
Sbjct: 289 ATHETRYNMMACAVDNLID 307
>sp|C0Q1A7|GHRB_SALPC Glyoxylate/hydroxypyruvate reductase B OS=Salmonella paratyphi C
(strain RKS4594) GN=ghrB PE=3 SV=1
Length = 324
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 101/199 (50%), Gaps = 7/199 (3%)
Query: 3 ILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNC 60
+L R + +V +GEW + G A+ D+ KT+G VG GRIG L QR F
Sbjct: 111 MLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTM 170
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+LYH R + + E A++ DLDT+L + D V V PLT +TR +F + A+MK
Sbjct: 171 PVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTAETRHLFGATQFARMKS 228
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
+ +N RG ++D A++ A +G I DV+ +P D P M N PH+
Sbjct: 229 SAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSNVVAVPHIGS 288
Query: 181 TTIDLRY---AAGVKDMLD 196
T + RY A V +++D
Sbjct: 289 ATHETRYNMMACAVDNLID 307
>sp|Q57IH8|GHRB_SALCH Glyoxylate/hydroxypyruvate reductase B OS=Salmonella choleraesuis
(strain SC-B67) GN=ghrB PE=3 SV=1
Length = 324
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 101/199 (50%), Gaps = 7/199 (3%)
Query: 3 ILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNC 60
+L R + +V +GEW + G A+ D+ KT+G VG GRIG L QR F
Sbjct: 111 MLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTM 170
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+LYH R + + E A++ DLDT+L + D V V PLT +TR +F + A+MK
Sbjct: 171 PVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTAETRHLFGATQFARMKS 228
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
+ +N RG ++D A++ A +G I DV+ +P D P M N PH+
Sbjct: 229 SAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSNVVAVPHIGS 288
Query: 181 TTIDLRY---AAGVKDMLD 196
T + RY A V +++D
Sbjct: 289 ATHETRYNMMACAVDNLID 307
>sp|A8G7S7|GHRB_SERP5 Glyoxylate/hydroxypyruvate reductase B OS=Serratia proteamaculans
(strain 568) GN=ghrB PE=3 SV=1
Length = 325
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 100/187 (53%), Gaps = 4/187 (2%)
Query: 3 ILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNC 60
+L R + +V +GEW + G + D+ KT+G +G GRIG L QR F
Sbjct: 111 VLATARRVVEVAERVKAGEWQGSIGADWFGVDVHHKTIGILGMGRIGLALAQRAHFGFGM 170
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+LY+ R + + E+ A+ DLDT+L + D + + PLT++T M +D++AKMKK
Sbjct: 171 PVLYNAR-RTHEEAEQRFNAR-RCDLDTLLAESDFICITLPLTDETFHMISRDQLAKMKK 228
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
+++N RG ++D A+++A +G I DV+ +P P P +PN PH+
Sbjct: 229 SGILINAGRGPVVDEAALIEALQNGTIHAAGLDVFEKEPLPVSSPLLTLPNVVALPHIGS 288
Query: 181 TTIDLRY 187
T + RY
Sbjct: 289 ATHETRY 295
>sp|B1IZP1|GHRB_ECOLC Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain
ATCC 8739 / DSM 1576 / Crooks) GN=ghrB PE=3 SV=1
Length = 324
Score = 107 bits (268), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 7/199 (3%)
Query: 3 ILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNC 60
+L R + +V +GEW + G + D+ KT+G VG GRIG L QR FN
Sbjct: 111 VLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNM 170
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+LY+ R + + E+ A++ DLDT+L + D V + PLT++T +F ++ AKMK
Sbjct: 171 PILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKS 228
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
+ +N RG ++D A++ A G I DV+ +P D P M N PH+
Sbjct: 229 SAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGS 288
Query: 181 TTIDLRY---AAGVKDMLD 196
T + RY A V +++D
Sbjct: 289 ATYETRYGMAACAVDNLID 307
>sp|B5BHT3|GHRB_SALPK Glyoxylate/hydroxypyruvate reductase B OS=Salmonella paratyphi A
(strain AKU_12601) GN=ghrB PE=3 SV=1
Length = 324
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 101/199 (50%), Gaps = 7/199 (3%)
Query: 3 ILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNC 60
+L R + +V +GEW + G A+ D+ KT+G VG GRIG L QR F
Sbjct: 111 MLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTM 170
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+LYH R + + E A++ DLDT+L + D V V PLT +TR +F + A+MK
Sbjct: 171 PVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTTETRHLFGTTQFARMKS 228
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
+ +N RG ++D A++ A +G I DV+ +P D P M N PH+
Sbjct: 229 SAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEHEPLSVDSPLLNMSNVVAVPHIGS 288
Query: 181 TTIDLRY---AAGVKDMLD 196
T + RY A V +++D
Sbjct: 289 ATHETRYNMMACAVDNLID 307
>sp|Q5PLL9|GHRB_SALPA Glyoxylate/hydroxypyruvate reductase B OS=Salmonella paratyphi A
(strain ATCC 9150 / SARB42) GN=ghrB PE=3 SV=1
Length = 324
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 101/199 (50%), Gaps = 7/199 (3%)
Query: 3 ILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNC 60
+L R + +V +GEW + G A+ D+ KT+G VG GRIG L QR F
Sbjct: 111 MLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTM 170
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+LYH R + + E A++ DLDT+L + D V V PLT +TR +F + A+MK
Sbjct: 171 PVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTTETRHLFGTTQFARMKS 228
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
+ +N RG ++D A++ A +G I DV+ +P D P M N PH+
Sbjct: 229 SAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEHEPLSVDSPLLNMSNVVAVPHIGS 288
Query: 181 TTIDLRY---AAGVKDMLD 196
T + RY A V +++D
Sbjct: 289 ATHETRYNMMACAVDNLID 307
>sp|Q83PR3|GHRB_SHIFL Glyoxylate/hydroxypyruvate reductase B OS=Shigella flexneri GN=ghrB
PE=3 SV=4
Length = 324
Score = 107 bits (267), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 7/199 (3%)
Query: 3 ILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNC 60
+L R + +V +GEW + G + D+ KT+G VG GRIG L QR+ FN
Sbjct: 111 VLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRVHFGFNM 170
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+LY+ R + + E+ A++ DLDT+L + D V + PLT++T +F ++ AKMK
Sbjct: 171 PILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKS 228
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
+ +N RG ++D A++ A G I DV+ +P D P M N PH+
Sbjct: 229 SAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGS 288
Query: 181 TTIDLRY---AAGVKDMLD 196
T + RY A V +++D
Sbjct: 289 ATHETRYGMAACAVDNLID 307
>sp|B1LJB3|GHRB_ECOSM Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain
SMS-3-5 / SECEC) GN=ghrB PE=3 SV=1
Length = 324
Score = 107 bits (267), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 7/199 (3%)
Query: 3 ILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNC 60
+L R + +V +GEW + G + D+ KT+G VG GRIG L QR + FN
Sbjct: 111 VLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAQFGFNM 170
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+LY+ R + + E+ A++ DLDT+L + D V + PLT++T +F ++ AKMK
Sbjct: 171 PILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKS 228
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
+ +N RG ++D A++ A G I DV+ +P D P M N PH+
Sbjct: 229 SAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGS 288
Query: 181 TTIDLRY---AAGVKDMLD 196
T + RY A V +++D
Sbjct: 289 ATHETRYGMAACAVDNLID 307
>sp|A9MUT4|GHRB_SALPB Glyoxylate/hydroxypyruvate reductase B OS=Salmonella paratyphi B
(strain ATCC BAA-1250 / SPB7) GN=ghrB PE=3 SV=1
Length = 324
Score = 107 bits (267), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 101/199 (50%), Gaps = 7/199 (3%)
Query: 3 ILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNC 60
+L R + +V +GEW + G A+ D+ KT+G VG GRIG L QR F
Sbjct: 111 MLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTM 170
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+LYH R + + E A++ DLDT+L + D V V PLT +TR +F + A+MK
Sbjct: 171 PVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTTETRHLFGTTQFARMKS 228
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
+ +N RG ++D A++ A +G I DV+ +P D P M N PH+
Sbjct: 229 SAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEHEPLSVDSPLLNMSNVVAVPHIGS 288
Query: 181 TTIDLRY---AAGVKDMLD 196
T + RY A V +++D
Sbjct: 289 ATHETRYNMMACAVDNLID 307
>sp|B5RGN1|GHRB_SALG2 Glyoxylate/hydroxypyruvate reductase B OS=Salmonella gallinarum
(strain 287/91 / NCTC 13346) GN=ghrB PE=3 SV=1
Length = 324
Score = 107 bits (267), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 100/199 (50%), Gaps = 7/199 (3%)
Query: 3 ILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNC 60
+L R + +V +GEW + G A+ D+ KT+G VG GRIG L QR F
Sbjct: 111 MLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTM 170
Query: 61 NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 120
+LYH R + + E A++ DLDT+L + D V V PLT +TR +F + A+MK
Sbjct: 171 PVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTAETRHLFGATQFARMKS 228
Query: 121 GVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSG 180
+ +N RG + D A++ A +G I DV+ +P D P M N PH+
Sbjct: 229 SAIFINAGRGPVADENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSNVVAVPHIGS 288
Query: 181 TTIDLRY---AAGVKDMLD 196
T + RY A V +++D
Sbjct: 289 ATHETRYNMMACAVDNLID 307
>sp|P0A544|SERA_MYCTU D-3-phosphoglycerate dehydrogenase OS=Mycobacterium tuberculosis
GN=serA PE=1 SV=1
Length = 528
Score = 107 bits (266), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 98/180 (54%), Gaps = 5/180 (2%)
Query: 28 AYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLD 87
++ ++ GKTVG VG GRIG+L+ QR+ F ++ +D + P + G + LD
Sbjct: 133 SFSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDP-YVSPARAAQLGIELLS-LD 190
Query: 88 TMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHI 147
+L + D + V+ P T +T G+ DK+ +AK K GV+IVN ARG ++D A+ DA + GH+
Sbjct: 191 DLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHV 250
Query: 148 AGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDLRYAAG--VKDMLDRYFKGEDFP 205
DV+ +P D P + +TPH+ +T + + AG V + + GE P
Sbjct: 251 RAAGLDVFATEPC-TDSPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGEFVP 309
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,885,084
Number of Sequences: 539616
Number of extensions: 3711614
Number of successful extensions: 9471
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 72
Number of HSP's that attempted gapping in prelim test: 8687
Number of HSP's gapped (non-prelim): 427
length of query: 221
length of database: 191,569,459
effective HSP length: 113
effective length of query: 108
effective length of database: 130,592,851
effective search space: 14104027908
effective search space used: 14104027908
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)