Query 027577
Match_columns 221
No_of_seqs 347 out of 2016
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 20:24:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027577.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027577hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jtm_A Formate dehydrogenase, 100.0 1.1E-56 3.7E-61 394.0 21.3 221 1-221 129-351 (351)
2 4g2n_A D-isomer specific 2-hyd 100.0 2.3E-52 7.7E-57 365.7 24.3 205 1-210 137-344 (345)
3 2j6i_A Formate dehydrogenase; 100.0 9.5E-53 3.3E-57 371.1 20.7 219 1-219 129-356 (364)
4 3pp8_A Glyoxylate/hydroxypyruv 100.0 5.7E-53 1.9E-57 365.8 18.7 208 1-216 108-315 (315)
5 3kb6_A D-lactate dehydrogenase 100.0 2.7E-53 9.1E-58 370.6 16.2 208 1-212 107-332 (334)
6 3hg7_A D-isomer specific 2-hyd 100.0 1.5E-52 5.2E-57 364.0 20.1 211 1-219 109-319 (324)
7 4hy3_A Phosphoglycerate oxidor 100.0 4.8E-51 1.7E-55 359.4 24.7 214 1-219 140-356 (365)
8 4e5n_A Thermostable phosphite 100.0 1.4E-51 4.6E-56 359.4 20.9 211 1-214 110-329 (330)
9 3evt_A Phosphoglycerate dehydr 100.0 5E-52 1.7E-56 361.0 18.1 212 1-218 104-318 (324)
10 3gg9_A D-3-phosphoglycerate de 100.0 2.5E-51 8.5E-56 360.3 21.4 210 1-211 117-336 (352)
11 2nac_A NAD-dependent formate d 100.0 1.6E-50 5.5E-55 359.1 21.8 218 1-218 156-375 (393)
12 2pi1_A D-lactate dehydrogenase 100.0 2.2E-51 7.7E-56 358.5 13.5 208 1-214 107-331 (334)
13 3k5p_A D-3-phosphoglycerate de 100.0 6.4E-50 2.2E-54 356.7 22.5 211 1-217 123-340 (416)
14 4dgs_A Dehydrogenase; structur 100.0 2.4E-50 8.4E-55 352.2 19.1 198 1-204 136-335 (340)
15 2yq5_A D-isomer specific 2-hyd 100.0 1E-49 3.6E-54 348.6 19.0 205 1-212 113-333 (343)
16 1sc6_A PGDH, D-3-phosphoglycer 100.0 5.1E-49 1.7E-53 351.2 20.4 204 1-210 112-322 (404)
17 1qp8_A Formate dehydrogenase; 100.0 3.1E-48 1.1E-52 334.6 20.3 207 1-219 92-303 (303)
18 1j4a_A D-LDH, D-lactate dehydr 100.0 2.2E-48 7.7E-53 339.6 19.4 204 1-211 113-331 (333)
19 1dxy_A D-2-hydroxyisocaproate 100.0 2.2E-48 7.4E-53 339.7 15.4 206 1-214 111-332 (333)
20 3gvx_A Glycerate dehydrogenase 100.0 2.2E-47 7.4E-52 327.1 20.1 191 1-203 91-284 (290)
21 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 2.5E-47 8.4E-52 333.0 20.6 199 1-204 132-332 (335)
22 1mx3_A CTBP1, C-terminal bindi 100.0 1.1E-46 3.6E-51 330.4 23.7 211 1-212 128-347 (347)
23 1wwk_A Phosphoglycerate dehydr 100.0 7.9E-47 2.7E-51 326.5 21.2 197 1-201 109-307 (307)
24 1xdw_A NAD+-dependent (R)-2-hy 100.0 2.5E-47 8.6E-52 332.7 17.0 203 1-210 112-330 (331)
25 1gdh_A D-glycerate dehydrogena 100.0 3E-46 1E-50 324.6 22.2 201 1-204 110-314 (320)
26 2cuk_A Glycerate dehydrogenase 100.0 1.1E-45 3.7E-50 319.9 21.7 200 1-210 108-310 (311)
27 2ekl_A D-3-phosphoglycerate de 100.0 3.1E-46 1.1E-50 323.6 18.1 197 1-204 111-312 (313)
28 3ba1_A HPPR, hydroxyphenylpyru 100.0 2.9E-45 9.9E-50 319.8 21.4 201 1-210 130-332 (333)
29 2gcg_A Glyoxylate reductase/hy 100.0 3.5E-44 1.2E-48 312.8 22.4 208 1-211 119-329 (330)
30 2w2k_A D-mandelate dehydrogena 100.0 1.1E-44 3.9E-49 317.9 19.1 209 1-212 123-339 (348)
31 2d0i_A Dehydrogenase; structur 100.0 2.8E-44 9.6E-49 313.7 20.3 206 1-212 107-319 (333)
32 2dbq_A Glyoxylate reductase; D 100.0 6.4E-44 2.2E-48 311.6 18.8 206 1-211 110-322 (334)
33 1ygy_A PGDH, D-3-phosphoglycer 100.0 3.6E-41 1.2E-45 310.2 23.7 206 1-213 109-316 (529)
34 3oet_A Erythronate-4-phosphate 100.0 4.1E-42 1.4E-46 303.4 10.7 165 32-203 115-285 (381)
35 2o4c_A Erythronate-4-phosphate 100.0 7.6E-40 2.6E-44 289.3 14.8 165 32-203 112-282 (380)
36 1v8b_A Adenosylhomocysteinase; 100.0 8.8E-32 3E-36 243.5 5.7 184 6-204 232-426 (479)
37 3d64_A Adenosylhomocysteinase; 100.0 3.7E-32 1.3E-36 246.8 2.6 183 6-204 252-441 (494)
38 3ce6_A Adenosylhomocysteinase; 99.9 1.3E-22 4.5E-27 184.5 4.5 164 32-204 270-441 (494)
39 1gtm_A Glutamate dehydrogenase 99.8 4.4E-22 1.5E-26 177.9 -1.9 153 31-199 206-385 (419)
40 2vhw_A Alanine dehydrogenase; 99.8 2.5E-19 8.5E-24 158.4 10.0 130 32-184 164-307 (377)
41 3n58_A Adenosylhomocysteinase; 99.7 3.8E-18 1.3E-22 152.3 8.5 105 31-140 242-347 (464)
42 3h9u_A Adenosylhomocysteinase; 99.7 1.5E-17 5.1E-22 148.4 10.2 106 31-141 206-312 (436)
43 3obb_A Probable 3-hydroxyisobu 99.7 1.2E-16 4E-21 137.2 8.6 116 37-154 4-121 (300)
44 3gvp_A Adenosylhomocysteinase 99.7 1.4E-16 4.9E-21 141.8 9.0 104 31-139 215-319 (435)
45 4gbj_A 6-phosphogluconate dehy 99.7 2.3E-16 8E-21 135.1 9.6 117 36-154 5-121 (297)
46 3d4o_A Dipicolinate synthase s 99.7 3.4E-16 1.1E-20 133.7 9.9 97 31-132 150-248 (293)
47 2rir_A Dipicolinate synthase, 99.6 4.3E-16 1.5E-20 133.4 10.1 98 30-132 151-250 (300)
48 2eez_A Alanine dehydrogenase; 99.6 7.9E-17 2.7E-21 141.9 3.5 153 32-203 162-335 (369)
49 3ggo_A Prephenate dehydrogenas 99.6 1.6E-14 5.3E-19 124.7 14.7 158 18-180 16-181 (314)
50 3qsg_A NAD-binding phosphogluc 99.6 4.1E-15 1.4E-19 128.0 10.8 136 14-153 2-142 (312)
51 3l6d_A Putative oxidoreductase 99.6 1.5E-15 5.3E-20 130.3 8.0 120 33-154 6-125 (306)
52 2g5c_A Prephenate dehydrogenas 99.6 1.4E-14 4.8E-19 122.3 13.7 141 37-181 2-150 (281)
53 4dll_A 2-hydroxy-3-oxopropiona 99.6 2.9E-15 9.8E-20 129.4 9.6 119 33-153 28-147 (320)
54 3qha_A Putative oxidoreductase 99.6 5.3E-15 1.8E-19 126.3 10.2 114 36-153 15-128 (296)
55 3doj_A AT3G25530, dehydrogenas 99.6 5.9E-15 2E-19 126.8 10.2 120 32-153 17-138 (310)
56 3pef_A 6-phosphogluconate dehy 99.6 9E-15 3.1E-19 124.1 10.2 115 37-153 2-118 (287)
57 4e21_A 6-phosphogluconate dehy 99.5 9.9E-15 3.4E-19 128.1 9.1 121 34-156 20-143 (358)
58 3pdu_A 3-hydroxyisobutyrate de 99.5 9.4E-15 3.2E-19 124.0 7.6 115 37-153 2-118 (287)
59 3g0o_A 3-hydroxyisobutyrate de 99.5 1.3E-14 4.4E-19 124.2 8.1 116 36-153 7-125 (303)
60 2h78_A Hibadh, 3-hydroxyisobut 99.5 2.3E-14 7.9E-19 122.2 9.0 115 37-153 4-120 (302)
61 3b1f_A Putative prephenate deh 99.5 5.9E-14 2E-18 119.0 10.7 143 36-182 6-159 (290)
62 4ezb_A Uncharacterized conserv 99.5 6.4E-14 2.2E-18 120.9 9.9 136 13-156 5-149 (317)
63 1gpj_A Glutamyl-tRNA reductase 99.5 3.6E-14 1.2E-18 126.4 6.8 139 33-203 164-326 (404)
64 4e12_A Diketoreductase; oxidor 99.5 5.6E-13 1.9E-17 113.0 13.6 132 37-179 5-161 (283)
65 4gwg_A 6-phosphogluconate dehy 99.4 2.7E-13 9.1E-18 123.2 8.9 120 36-156 4-131 (484)
66 2zyd_A 6-phosphogluconate dehy 99.4 4.5E-13 1.5E-17 121.8 10.1 115 33-148 12-133 (480)
67 1vpd_A Tartronate semialdehyde 99.4 3.1E-13 1.1E-17 114.8 8.3 112 37-148 6-119 (299)
68 1c1d_A L-phenylalanine dehydro 99.4 8E-13 2.7E-17 115.6 10.7 108 33-148 172-280 (355)
69 3cky_A 2-hydroxymethyl glutara 99.4 4.2E-13 1.4E-17 114.0 8.1 112 37-148 5-118 (301)
70 1yb4_A Tartronic semialdehyde 99.4 4.9E-13 1.7E-17 113.2 8.2 111 37-148 4-116 (295)
71 2f1k_A Prephenate dehydrogenas 99.4 4.1E-12 1.4E-16 106.8 13.4 138 37-180 1-143 (279)
72 2p4q_A 6-phosphogluconate dehy 99.4 1.2E-12 4.1E-17 119.4 10.5 112 36-148 10-129 (497)
73 1x13_A NAD(P) transhydrogenase 99.4 7.1E-13 2.4E-17 117.9 8.6 102 33-135 169-301 (401)
74 3ktd_A Prephenate dehydrogenas 99.4 7.4E-13 2.5E-17 115.4 8.1 140 36-180 8-155 (341)
75 2gf2_A Hibadh, 3-hydroxyisobut 99.4 5.1E-13 1.7E-17 113.3 6.7 109 37-145 1-111 (296)
76 2uyy_A N-PAC protein; long-cha 99.4 1.3E-12 4.6E-17 111.9 8.9 112 37-148 31-144 (316)
77 3p2y_A Alanine dehydrogenase/p 99.4 1.6E-12 5.5E-17 114.5 9.5 95 33-128 181-302 (381)
78 2cvz_A Dehydrogenase, 3-hydrox 99.4 9.5E-13 3.3E-17 111.0 7.7 109 37-148 2-110 (289)
79 3dtt_A NADP oxidoreductase; st 99.3 5.7E-13 1.9E-17 110.7 5.4 97 30-129 13-125 (245)
80 2pv7_A T-protein [includes: ch 99.3 5E-12 1.7E-16 107.9 10.6 137 12-178 4-142 (298)
81 2iz1_A 6-phosphogluconate dehy 99.3 2.7E-12 9.4E-17 116.4 9.3 117 37-154 6-129 (474)
82 1l7d_A Nicotinamide nucleotide 99.3 7.1E-12 2.4E-16 110.8 11.6 99 33-132 169-300 (384)
83 2pgd_A 6-phosphogluconate dehy 99.3 2.8E-12 9.4E-17 116.6 9.2 117 37-154 3-127 (482)
84 4dio_A NAD(P) transhydrogenase 99.3 4.1E-12 1.4E-16 112.7 10.0 100 33-133 187-319 (405)
85 1np3_A Ketol-acid reductoisome 99.3 3.7E-12 1.3E-16 110.7 7.6 137 33-180 13-156 (338)
86 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.3 6.6E-12 2.3E-16 114.0 9.1 117 37-154 2-129 (478)
87 2dpo_A L-gulonate 3-dehydrogen 99.3 2.7E-11 9.1E-16 104.7 11.8 133 36-179 6-163 (319)
88 3d1l_A Putative NADP oxidoredu 99.3 6.2E-12 2.1E-16 105.1 7.5 100 33-134 7-108 (266)
89 1i36_A Conserved hypothetical 99.3 5.3E-12 1.8E-16 105.3 6.7 103 37-145 1-105 (264)
90 3ond_A Adenosylhomocysteinase; 99.2 2.6E-11 8.9E-16 109.7 9.9 96 31-131 260-355 (488)
91 1zej_A HBD-9, 3-hydroxyacyl-CO 99.2 4.4E-11 1.5E-15 102.1 10.6 130 34-179 10-147 (293)
92 2yjz_A Metalloreductase steap4 98.9 9.1E-13 3.1E-17 106.7 0.0 94 34-133 17-110 (201)
93 3fr7_A Putative ketol-acid red 99.2 1.1E-11 3.7E-16 111.8 6.9 97 31-130 48-156 (525)
94 3tri_A Pyrroline-5-carboxylate 99.2 6.4E-11 2.2E-15 100.3 11.0 105 36-144 3-112 (280)
95 2d5c_A AROE, shikimate 5-dehyd 99.2 6.9E-11 2.4E-15 99.0 10.0 109 32-148 113-224 (263)
96 2izz_A Pyrroline-5-carboxylate 99.2 9.4E-11 3.2E-15 101.1 10.7 107 34-144 20-132 (322)
97 3gt0_A Pyrroline-5-carboxylate 99.2 2.6E-11 8.8E-16 100.6 6.3 104 37-144 3-111 (247)
98 2hk9_A Shikimate dehydrogenase 99.2 6E-11 2E-15 100.2 8.3 110 32-148 125-237 (275)
99 2q3e_A UDP-glucose 6-dehydroge 99.2 3.3E-11 1.1E-15 109.1 6.9 110 37-146 6-149 (467)
100 3c24_A Putative oxidoreductase 99.2 6.2E-11 2.1E-15 100.3 7.8 92 37-131 12-104 (286)
101 2vns_A Metalloreductase steap3 99.1 6E-11 2E-15 96.6 6.5 95 35-134 27-121 (215)
102 3oj0_A Glutr, glutamyl-tRNA re 99.1 1.5E-10 5.1E-15 88.2 8.2 89 36-130 21-112 (144)
103 1leh_A Leucine dehydrogenase; 99.1 1.7E-10 6E-15 101.2 9.5 108 33-148 170-279 (364)
104 1f0y_A HCDH, L-3-hydroxyacyl-C 99.1 6.4E-10 2.2E-14 94.8 12.8 117 37-156 16-161 (302)
105 2ahr_A Putative pyrroline carb 99.1 3.1E-10 1E-14 94.4 10.4 101 37-145 4-105 (259)
106 3pid_A UDP-glucose 6-dehydroge 99.1 3.2E-10 1.1E-14 101.5 10.7 115 31-147 31-172 (432)
107 2raf_A Putative dinucleotide-b 99.1 2.7E-10 9.3E-15 92.3 9.0 80 32-132 15-94 (209)
108 2i99_A MU-crystallin homolog; 99.1 1.5E-10 5.1E-15 99.5 7.5 111 34-153 133-248 (312)
109 4a7p_A UDP-glucose dehydrogena 99.1 9.3E-10 3.2E-14 99.0 12.5 109 36-145 8-146 (446)
110 3k6j_A Protein F01G10.3, confi 99.1 3.4E-09 1.2E-13 95.6 15.6 131 37-179 55-206 (460)
111 1yqg_A Pyrroline-5-carboxylate 99.1 2.1E-10 7.1E-15 95.5 6.7 100 37-145 1-103 (263)
112 1mv8_A GMD, GDP-mannose 6-dehy 99.1 3.2E-10 1.1E-14 101.6 8.3 107 37-144 1-140 (436)
113 3gg2_A Sugar dehydrogenase, UD 99.1 6.2E-10 2.1E-14 100.3 10.1 107 37-144 3-138 (450)
114 3k96_A Glycerol-3-phosphate de 99.0 4.1E-10 1.4E-14 98.6 8.7 98 35-134 28-139 (356)
115 1bg6_A N-(1-D-carboxylethyl)-L 99.0 1.8E-09 6.2E-14 93.4 10.5 105 37-144 5-124 (359)
116 1txg_A Glycerol-3-phosphate de 99.0 9E-10 3.1E-14 94.5 8.2 105 37-144 1-124 (335)
117 2y0c_A BCEC, UDP-glucose dehyd 99.0 1.2E-09 4.1E-14 99.2 9.2 108 36-144 8-144 (478)
118 2rcy_A Pyrroline carboxylate r 99.0 1.7E-09 5.7E-14 89.9 8.7 99 36-145 4-106 (262)
119 2ew2_A 2-dehydropantoate 2-red 99.0 1.6E-09 5.6E-14 91.8 8.8 108 37-147 4-126 (316)
120 1jay_A Coenzyme F420H2:NADP+ o 99.0 1.6E-09 5.3E-14 87.3 8.0 116 37-160 1-137 (212)
121 1x0v_A GPD-C, GPDH-C, glycerol 99.0 1.5E-09 5.1E-14 94.1 8.3 95 36-132 8-128 (354)
122 3mog_A Probable 3-hydroxybutyr 98.9 2.3E-09 7.9E-14 97.4 9.7 117 36-157 5-146 (483)
123 1yj8_A Glycerol-3-phosphate de 98.9 1.4E-09 4.7E-14 95.5 7.9 93 37-131 22-144 (375)
124 1z82_A Glycerol-3-phosphate de 98.9 2.6E-09 9E-14 92.2 9.5 89 35-130 13-113 (335)
125 1dlj_A UDP-glucose dehydrogena 98.9 2.3E-09 8E-14 95.2 9.0 106 37-145 1-134 (402)
126 1evy_A Glycerol-3-phosphate de 98.9 5.5E-10 1.9E-14 97.5 4.9 95 38-133 17-129 (366)
127 4huj_A Uncharacterized protein 98.9 9.6E-10 3.3E-14 89.7 5.7 92 36-131 23-116 (220)
128 2dc1_A L-aspartate dehydrogena 98.9 1.1E-08 3.7E-13 84.2 10.8 99 37-148 1-104 (236)
129 1y81_A Conserved hypothetical 98.9 1.3E-08 4.4E-13 77.4 10.0 106 34-153 12-121 (138)
130 3g79_A NDP-N-acetyl-D-galactos 98.9 5.6E-09 1.9E-13 94.6 9.0 105 36-141 18-160 (478)
131 1ks9_A KPA reductase;, 2-dehyd 98.9 4.2E-09 1.4E-13 88.3 7.3 91 37-130 1-99 (291)
132 2o3j_A UDP-glucose 6-dehydroge 98.8 4.1E-09 1.4E-13 95.7 7.2 107 37-144 10-151 (481)
133 1zcj_A Peroxisomal bifunctiona 98.8 2.2E-08 7.4E-13 90.5 11.3 116 36-155 37-174 (463)
134 3phh_A Shikimate dehydrogenase 98.8 1.3E-08 4.3E-13 85.8 9.0 94 36-131 118-212 (269)
135 3ulk_A Ketol-acid reductoisome 98.8 1.9E-08 6.6E-13 89.4 9.3 96 31-130 32-133 (491)
136 1pjc_A Protein (L-alanine dehy 98.8 7.6E-09 2.6E-13 90.5 6.6 97 33-129 164-268 (361)
137 3ojo_A CAP5O; rossmann fold, c 98.8 2.4E-08 8.1E-13 89.4 9.1 110 34-143 9-144 (431)
138 2egg_A AROE, shikimate 5-dehyd 98.7 3.4E-08 1.2E-12 84.2 9.6 112 32-148 137-258 (297)
139 2duw_A Putative COA-binding pr 98.7 1.6E-08 5.6E-13 77.4 6.4 103 36-148 13-119 (145)
140 1wdk_A Fatty oxidation complex 98.7 1.2E-08 4.1E-13 96.8 6.5 117 36-156 314-454 (715)
141 3i83_A 2-dehydropantoate 2-red 98.7 1.1E-07 3.9E-12 81.5 12.0 107 37-148 3-124 (320)
142 3c85_A Putative glutathione-re 98.7 1.3E-08 4.3E-13 80.2 5.4 95 32-128 35-139 (183)
143 2i76_A Hypothetical protein; N 98.7 2.9E-09 9.8E-14 89.7 1.6 87 37-131 3-92 (276)
144 3don_A Shikimate dehydrogenase 98.7 1.2E-08 4.3E-13 86.2 5.1 112 32-148 113-228 (277)
145 2qyt_A 2-dehydropantoate 2-red 98.7 7.9E-09 2.7E-13 87.9 3.8 103 37-144 9-132 (317)
146 3ghy_A Ketopantoate reductase 98.7 4.1E-08 1.4E-12 84.8 8.4 91 36-130 3-106 (335)
147 3u62_A Shikimate dehydrogenase 98.7 2.2E-08 7.6E-13 83.6 6.4 106 33-145 106-214 (253)
148 2wtb_A MFP2, fatty acid multif 98.7 3.2E-08 1.1E-12 94.0 7.9 116 37-156 313-452 (725)
149 3hwr_A 2-dehydropantoate 2-red 98.7 8E-08 2.7E-12 82.5 9.2 106 33-143 16-134 (318)
150 1x7d_A Ornithine cyclodeaminas 98.7 6E-08 2.1E-12 84.6 8.4 93 34-130 127-228 (350)
151 3hn2_A 2-dehydropantoate 2-red 98.6 1.9E-07 6.5E-12 79.8 11.4 108 37-150 3-124 (312)
152 2g1u_A Hypothetical protein TM 98.6 2.1E-07 7E-12 71.4 9.4 98 32-131 15-121 (155)
153 3dfu_A Uncharacterized protein 98.6 3E-08 1E-12 81.8 4.7 71 35-128 5-75 (232)
154 3hdj_A Probable ornithine cycl 98.6 3.2E-07 1.1E-11 78.9 11.2 89 35-131 120-216 (313)
155 3ic5_A Putative saccharopine d 98.6 7.4E-08 2.5E-12 69.6 6.1 89 35-128 4-100 (118)
156 2c2x_A Methylenetetrahydrofola 98.6 2E-07 6.7E-12 78.7 9.0 81 31-132 153-236 (281)
157 3l07_A Bifunctional protein fo 98.6 1.9E-07 6.5E-12 78.9 8.6 80 31-131 156-236 (285)
158 3p2o_A Bifunctional protein fo 98.5 2E-07 6.8E-12 78.8 8.4 81 31-132 155-236 (285)
159 2z2v_A Hypothetical protein PH 98.5 1.2E-07 4E-12 83.2 7.2 109 33-148 13-127 (365)
160 4a26_A Putative C-1-tetrahydro 98.5 1.4E-07 4.9E-12 80.2 7.4 80 31-131 160-242 (300)
161 1lss_A TRK system potassium up 98.5 4.6E-07 1.6E-11 67.3 9.4 90 36-127 4-102 (140)
162 1b0a_A Protein (fold bifunctio 98.5 1.5E-07 5.1E-12 79.7 7.2 81 31-132 154-235 (288)
163 1a4i_A Methylenetetrahydrofola 98.5 3.4E-07 1.2E-11 77.9 9.2 82 31-133 160-242 (301)
164 3ngx_A Bifunctional protein fo 98.5 1.7E-07 5.7E-12 78.9 7.1 77 34-131 148-225 (276)
165 3fwz_A Inner membrane protein 98.5 1.8E-07 6.2E-12 70.6 6.7 91 36-128 7-105 (140)
166 4a5o_A Bifunctional protein fo 98.5 3.5E-07 1.2E-11 77.3 8.7 81 31-132 156-237 (286)
167 3c7a_A Octopine dehydrogenase; 98.5 2.5E-07 8.6E-12 81.6 7.9 89 37-127 3-115 (404)
168 1edz_A 5,10-methylenetetrahydr 98.5 6.9E-08 2.3E-12 83.1 4.1 94 31-130 172-277 (320)
169 1omo_A Alanine dehydrogenase; 98.5 5.1E-07 1.8E-11 77.8 9.5 88 35-130 124-219 (322)
170 3uuw_A Putative oxidoreductase 98.5 5.1E-07 1.7E-11 76.8 8.8 108 36-148 6-119 (308)
171 3ado_A Lambda-crystallin; L-gu 98.5 3.8E-07 1.3E-11 78.5 7.9 136 36-180 6-166 (319)
172 3e18_A Oxidoreductase; dehydro 98.4 4.9E-07 1.7E-11 78.8 7.9 67 36-102 5-75 (359)
173 3llv_A Exopolyphosphatase-rela 98.4 5.7E-07 2E-11 67.5 7.2 90 34-125 4-101 (141)
174 2hmt_A YUAA protein; RCK, KTN, 98.4 2.7E-07 9.3E-12 68.8 5.3 96 33-130 3-106 (144)
175 3ego_A Probable 2-dehydropanto 98.4 4.3E-07 1.5E-11 77.5 7.2 107 36-148 2-118 (307)
176 1p77_A Shikimate 5-dehydrogena 98.4 5.2E-07 1.8E-11 75.8 7.4 71 32-103 115-191 (272)
177 4hkt_A Inositol 2-dehydrogenas 98.4 8.7E-07 3E-11 76.1 8.7 106 37-148 4-116 (331)
178 2ewd_A Lactate dehydrogenase,; 98.4 7E-07 2.4E-11 76.6 8.0 105 36-142 4-135 (317)
179 3g17_A Similar to 2-dehydropan 98.4 7.3E-08 2.5E-12 81.7 1.8 94 37-132 3-100 (294)
180 3euw_A MYO-inositol dehydrogen 98.4 7.9E-07 2.7E-11 76.7 8.3 66 37-102 5-75 (344)
181 3db2_A Putative NADPH-dependen 98.4 8.1E-07 2.8E-11 77.0 8.4 67 37-103 6-77 (354)
182 3o8q_A Shikimate 5-dehydrogena 98.4 5.4E-07 1.9E-11 76.3 7.0 96 31-130 121-223 (281)
183 1tlt_A Putative oxidoreductase 98.4 2.1E-06 7.2E-11 73.3 10.7 107 37-148 6-118 (319)
184 3q2i_A Dehydrogenase; rossmann 98.4 7.3E-07 2.5E-11 77.3 7.5 67 36-102 13-85 (354)
185 1nyt_A Shikimate 5-dehydrogena 98.4 1.9E-06 6.5E-11 72.2 9.7 95 32-131 115-217 (271)
186 4fgw_A Glycerol-3-phosphate de 98.3 1E-06 3.6E-11 77.8 8.2 92 38-131 36-154 (391)
187 3pwz_A Shikimate dehydrogenase 98.3 2.1E-06 7.1E-11 72.3 9.3 96 31-130 115-217 (272)
188 1iuk_A Hypothetical protein TT 98.3 3.1E-06 1.1E-10 64.2 9.4 104 35-148 12-119 (140)
189 2d59_A Hypothetical protein PH 98.3 4.1E-06 1.4E-10 63.8 10.1 101 36-148 22-126 (144)
190 2ho3_A Oxidoreductase, GFO/IDH 98.3 2.3E-06 8E-11 73.2 9.4 65 37-101 2-71 (325)
191 3rc1_A Sugar 3-ketoreductase; 98.3 1.6E-06 5.4E-11 75.3 8.3 68 35-102 26-99 (350)
192 2glx_A 1,5-anhydro-D-fructose 98.3 2E-06 6.9E-11 73.6 8.7 107 37-148 1-115 (332)
193 1vl6_A Malate oxidoreductase; 98.3 5E-06 1.7E-10 73.1 11.1 97 31-132 187-298 (388)
194 1j5p_A Aspartate dehydrogenase 98.3 3.6E-06 1.2E-10 70.0 9.5 101 34-148 10-114 (253)
195 3cea_A MYO-inositol 2-dehydrog 98.3 2E-06 6.9E-11 74.0 8.3 107 37-148 9-125 (346)
196 3tnl_A Shikimate dehydrogenase 98.3 5.9E-06 2E-10 71.0 10.9 72 31-102 149-236 (315)
197 1f06_A MESO-diaminopimelate D- 98.3 3.9E-06 1.3E-10 72.1 9.7 102 37-146 4-110 (320)
198 3ezy_A Dehydrogenase; structur 98.3 2.1E-06 7.3E-11 74.0 7.9 66 37-102 3-74 (344)
199 3c1a_A Putative oxidoreductase 98.2 6.9E-07 2.4E-11 76.2 4.7 106 37-148 11-122 (315)
200 3jyo_A Quinate/shikimate dehyd 98.2 2.5E-06 8.5E-11 72.2 7.9 71 32-102 123-204 (283)
201 1xea_A Oxidoreductase, GFO/IDH 98.2 3.8E-06 1.3E-10 71.8 9.1 107 37-148 3-116 (323)
202 3e9m_A Oxidoreductase, GFO/IDH 98.2 2E-06 6.7E-11 74.0 7.0 108 36-148 5-120 (330)
203 1pzg_A LDH, lactate dehydrogen 98.2 3.9E-06 1.3E-10 72.5 8.8 65 36-100 9-86 (331)
204 1hyh_A L-hicdh, L-2-hydroxyiso 98.2 4E-06 1.4E-10 71.5 8.5 65 37-102 2-79 (309)
205 3fbt_A Chorismate mutase and s 98.2 3.1E-06 1E-10 71.7 7.4 95 31-130 117-216 (282)
206 3ec7_A Putative dehydrogenase; 98.2 5.1E-06 1.8E-10 72.2 8.8 68 35-102 22-97 (357)
207 3evn_A Oxidoreductase, GFO/IDH 98.2 4.8E-06 1.7E-10 71.4 8.5 108 36-148 5-120 (329)
208 2p2s_A Putative oxidoreductase 98.2 1.1E-05 3.7E-10 69.3 10.6 107 37-148 5-119 (336)
209 2hjr_A Malate dehydrogenase; m 98.2 8.6E-06 2.9E-10 70.3 9.8 65 36-101 14-91 (328)
210 3bio_A Oxidoreductase, GFO/IDH 98.2 3.6E-06 1.2E-10 71.8 7.0 102 36-146 9-117 (304)
211 1nvt_A Shikimate 5'-dehydrogen 98.1 3.9E-06 1.3E-10 70.9 6.9 108 32-145 124-245 (287)
212 3f4l_A Putative oxidoreductase 98.1 7E-06 2.4E-10 70.9 8.6 105 37-146 3-116 (345)
213 1guz_A Malate dehydrogenase; o 98.1 8.5E-06 2.9E-10 69.6 8.9 65 37-102 1-79 (310)
214 3mz0_A Inositol 2-dehydrogenas 98.1 3.6E-06 1.2E-10 72.6 6.6 66 37-102 3-76 (344)
215 3t4e_A Quinate/shikimate dehyd 98.1 6.8E-06 2.3E-10 70.5 7.9 73 31-103 143-231 (312)
216 3vtf_A UDP-glucose 6-dehydroge 98.1 6E-06 2E-10 74.0 7.7 104 36-140 21-156 (444)
217 1a5z_A L-lactate dehydrogenase 98.1 8.6E-06 2.9E-10 69.9 8.4 64 37-102 1-77 (319)
218 3l4b_C TRKA K+ channel protien 98.1 5.6E-06 1.9E-10 66.8 6.8 91 37-129 1-100 (218)
219 1id1_A Putative potassium chan 98.1 7.5E-06 2.6E-10 62.3 7.1 91 36-128 3-105 (153)
220 1ydw_A AX110P-like protein; st 98.1 9.2E-06 3.2E-10 70.5 8.2 107 37-148 7-124 (362)
221 3e82_A Putative oxidoreductase 98.1 2E-05 6.8E-10 68.6 10.0 105 37-148 8-120 (364)
222 1npy_A Hypothetical shikimate 98.1 1.9E-05 6.6E-10 66.3 9.5 67 35-103 118-186 (271)
223 3qy9_A DHPR, dihydrodipicolina 98.0 1.2E-05 4.2E-10 66.5 8.0 81 37-130 4-85 (243)
224 2dvm_A Malic enzyme, 439AA lon 98.0 1E-05 3.4E-10 72.4 8.0 111 31-146 181-312 (439)
225 3abi_A Putative uncharacterize 98.0 7E-06 2.4E-10 71.5 6.8 107 33-146 13-125 (365)
226 2qrj_A Saccharopine dehydrogen 98.0 3E-06 1E-10 74.8 4.4 84 35-129 213-301 (394)
227 3fhl_A Putative oxidoreductase 98.0 1.4E-05 4.7E-10 69.5 8.5 64 37-102 6-75 (362)
228 3i23_A Oxidoreductase, GFO/IDH 98.0 1.4E-05 4.8E-10 69.1 8.3 65 37-102 3-75 (349)
229 3ohs_X Trans-1,2-dihydrobenzen 98.0 7.1E-06 2.4E-10 70.5 6.4 66 37-102 3-76 (334)
230 4fb5_A Probable oxidoreductase 98.0 1.8E-05 6.3E-10 68.6 9.1 67 36-102 25-104 (393)
231 3o9z_A Lipopolysaccaride biosy 98.0 2.1E-05 7E-10 67.2 8.8 65 37-101 4-81 (312)
232 3m2t_A Probable dehydrogenase; 98.0 5.3E-06 1.8E-10 72.1 5.0 66 36-101 5-77 (359)
233 1t2d_A LDH-P, L-lactate dehydr 98.0 3.5E-05 1.2E-09 66.2 10.0 64 36-100 4-80 (322)
234 3l9w_A Glutathione-regulated p 98.0 7.8E-06 2.7E-10 72.7 6.0 92 36-129 4-103 (413)
235 1lld_A L-lactate dehydrogenase 98.0 2.6E-05 8.8E-10 66.4 9.0 94 35-130 6-126 (319)
236 1h6d_A Precursor form of gluco 98.0 1.6E-05 5.5E-10 70.9 8.0 107 37-148 84-203 (433)
237 3oa2_A WBPB; oxidoreductase, s 98.0 2.4E-05 8.1E-10 67.0 8.7 66 37-102 4-83 (318)
238 3kux_A Putative oxidoreductase 98.0 1.5E-05 5.2E-10 68.9 7.6 67 37-104 8-79 (352)
239 2v6b_A L-LDH, L-lactate dehydr 98.0 1.5E-05 5.2E-10 67.9 7.3 113 37-150 1-138 (304)
240 2ixa_A Alpha-N-acetylgalactosa 97.9 3.1E-05 1.1E-09 69.2 9.1 67 36-102 20-101 (444)
241 2aef_A Calcium-gated potassium 97.9 1.6E-05 5.5E-10 64.7 6.6 87 36-126 9-103 (234)
242 4b4u_A Bifunctional protein fo 97.9 3.9E-05 1.3E-09 65.2 8.6 79 31-130 174-253 (303)
243 4had_A Probable oxidoreductase 97.9 2E-05 6.9E-10 67.9 7.0 65 38-102 25-96 (350)
244 4gmf_A Yersiniabactin biosynth 97.9 2.6E-05 9E-10 68.4 7.7 111 36-148 7-121 (372)
245 2nu8_A Succinyl-COA ligase [AD 97.9 3.5E-05 1.2E-09 65.2 8.2 105 36-148 7-117 (288)
246 2i6t_A Ubiquitin-conjugating e 97.9 2.8E-05 9.6E-10 66.4 7.6 92 36-129 14-126 (303)
247 1oju_A MDH, malate dehydrogena 97.9 3.6E-05 1.2E-09 65.4 8.2 98 37-137 1-125 (294)
248 4f2g_A Otcase 1, ornithine car 97.9 0.00011 3.6E-09 62.9 10.8 96 33-128 151-264 (309)
249 3fef_A Putative glucosidase LP 97.8 1.6E-05 5.6E-10 71.4 5.6 67 35-102 4-85 (450)
250 2axq_A Saccharopine dehydrogen 97.8 1.1E-05 3.8E-10 72.9 4.4 109 31-145 18-135 (467)
251 4ep1_A Otcase, ornithine carba 97.8 0.00019 6.3E-09 62.1 11.7 96 33-128 176-294 (340)
252 3two_A Mannitol dehydrogenase; 97.8 6.4E-05 2.2E-09 64.7 8.8 92 35-131 176-268 (348)
253 3dfz_A SIRC, precorrin-2 dehyd 97.8 8.6E-05 2.9E-09 60.6 9.0 91 31-128 26-121 (223)
254 3e8x_A Putative NAD-dependent 97.8 5.9E-05 2E-09 60.9 7.9 73 31-103 16-95 (236)
255 2nvw_A Galactose/lactose metab 97.8 4.1E-05 1.4E-09 69.2 7.6 66 36-101 39-117 (479)
256 4gqa_A NAD binding oxidoreduct 97.8 2.3E-05 8E-10 69.1 5.8 66 37-102 27-106 (412)
257 2i6u_A Otcase, ornithine carba 97.8 0.00028 9.7E-09 60.2 12.3 96 33-128 145-265 (307)
258 2ef0_A Ornithine carbamoyltran 97.8 0.0003 1E-08 59.8 12.4 96 33-128 151-261 (301)
259 3nep_X Malate dehydrogenase; h 97.8 9.3E-05 3.2E-09 63.5 9.3 98 37-136 1-124 (314)
260 3gvi_A Malate dehydrogenase; N 97.8 0.00014 4.7E-09 62.6 10.2 95 34-129 5-125 (324)
261 3gdo_A Uncharacterized oxidore 97.8 4.1E-05 1.4E-09 66.4 6.9 65 37-103 6-76 (358)
262 3pqe_A L-LDH, L-lactate dehydr 97.8 6E-05 2.1E-09 65.0 7.8 98 36-135 5-127 (326)
263 1jw9_B Molybdopterin biosynthe 97.8 5.2E-06 1.8E-10 68.9 1.0 107 13-127 12-152 (249)
264 3moi_A Probable dehydrogenase; 97.8 1.8E-05 6.1E-10 69.5 4.5 66 37-102 3-74 (387)
265 1pvv_A Otcase, ornithine carba 97.8 0.00041 1.4E-08 59.4 12.8 96 33-128 152-271 (315)
266 1ff9_A Saccharopine reductase; 97.8 3.3E-05 1.1E-09 69.3 6.3 69 35-103 2-79 (450)
267 1ldn_A L-lactate dehydrogenase 97.8 4E-05 1.4E-09 65.7 6.5 98 36-135 6-128 (316)
268 1zh8_A Oxidoreductase; TM0312, 97.8 3.3E-05 1.1E-09 66.6 6.0 67 36-102 18-92 (340)
269 1oi7_A Succinyl-COA synthetase 97.8 7E-05 2.4E-09 63.4 7.9 105 36-148 7-117 (288)
270 2a9f_A Putative malic enzyme ( 97.8 6.8E-05 2.3E-09 66.0 8.0 158 31-204 183-361 (398)
271 1ur5_A Malate dehydrogenase; o 97.7 0.0001 3.4E-09 63.0 8.7 95 37-135 3-124 (309)
272 3tum_A Shikimate dehydrogenase 97.7 9.2E-05 3.1E-09 62.1 8.3 98 31-128 120-225 (269)
273 3zwc_A Peroxisomal bifunctiona 97.7 0.00011 3.8E-09 69.9 9.8 135 36-180 316-472 (742)
274 3gd5_A Otcase, ornithine carba 97.7 0.00031 1.1E-08 60.3 11.6 96 33-128 154-273 (323)
275 2vt3_A REX, redox-sensing tran 97.7 3.4E-05 1.2E-09 62.7 5.4 66 36-101 85-154 (215)
276 4h3v_A Oxidoreductase domain p 97.7 3.1E-05 1E-09 67.1 4.9 66 37-102 7-85 (390)
277 1vlv_A Otcase, ornithine carba 97.7 0.00038 1.3E-08 59.8 11.6 96 33-128 164-285 (325)
278 4ew6_A D-galactose-1-dehydroge 97.7 0.00012 4.2E-09 62.8 8.6 60 36-101 25-90 (330)
279 4fcc_A Glutamate dehydrogenase 97.7 0.0002 6.9E-09 64.0 10.1 110 31-148 230-368 (450)
280 1yqd_A Sinapyl alcohol dehydro 97.7 5.5E-05 1.9E-09 65.7 6.3 91 35-130 187-284 (366)
281 3v5n_A Oxidoreductase; structu 97.7 3.8E-05 1.3E-09 68.1 5.2 68 36-103 37-121 (417)
282 3dty_A Oxidoreductase, GFO/IDH 97.7 2.3E-05 7.8E-10 69.0 3.7 67 36-102 12-95 (398)
283 1pg5_A Aspartate carbamoyltran 97.7 0.00025 8.7E-09 60.3 9.9 96 33-128 146-260 (299)
284 3tpf_A Otcase, ornithine carba 97.6 0.0004 1.4E-08 59.3 11.0 96 33-128 142-262 (307)
285 3p7m_A Malate dehydrogenase; p 97.6 0.00025 8.4E-09 61.0 9.8 99 35-136 4-128 (321)
286 3vku_A L-LDH, L-lactate dehydr 97.6 0.00015 5.2E-09 62.4 8.2 100 34-135 7-130 (326)
287 3btv_A Galactose/lactose metab 97.6 3.6E-05 1.2E-09 68.8 4.4 66 36-101 20-98 (438)
288 1y6j_A L-lactate dehydrogenase 97.6 0.00021 7.3E-09 61.2 9.1 112 36-150 7-147 (318)
289 1lc0_A Biliverdin reductase A; 97.6 0.00012 4E-09 61.9 7.2 102 37-148 8-118 (294)
290 1uuf_A YAHK, zinc-type alcohol 97.6 8.6E-05 2.9E-09 64.7 6.5 91 35-130 194-290 (369)
291 4a8t_A Putrescine carbamoyltra 97.6 0.00043 1.5E-08 59.8 10.6 95 33-128 172-292 (339)
292 3d0o_A L-LDH 1, L-lactate dehy 97.6 0.00019 6.4E-09 61.5 8.3 99 35-135 5-128 (317)
293 1nvm_B Acetaldehyde dehydrogen 97.6 9.6E-05 3.3E-09 63.3 6.5 87 37-126 5-102 (312)
294 2czc_A Glyceraldehyde-3-phosph 97.6 0.00012 4.3E-09 63.1 7.2 67 37-103 3-90 (334)
295 3u3x_A Oxidoreductase; structu 97.6 7.3E-05 2.5E-09 65.0 5.8 66 36-101 26-97 (361)
296 1dxh_A Ornithine carbamoyltran 97.6 0.00033 1.1E-08 60.5 9.7 97 33-129 152-275 (335)
297 1piw_A Hypothetical zinc-type 97.6 9.4E-05 3.2E-09 64.0 6.2 92 35-130 179-278 (360)
298 2cdc_A Glucose dehydrogenase g 97.6 7.8E-05 2.7E-09 64.7 5.7 93 33-129 178-279 (366)
299 1cdo_A Alcohol dehydrogenase; 97.6 0.00024 8.2E-09 61.7 8.8 90 35-129 192-295 (374)
300 2fp4_A Succinyl-COA ligase [GD 97.6 0.0003 1E-08 60.0 9.0 108 33-148 10-125 (305)
301 1p0f_A NADP-dependent alcohol 97.6 0.00025 8.7E-09 61.5 8.7 90 35-129 191-294 (373)
302 2jhf_A Alcohol dehydrogenase E 97.6 0.00023 8E-09 61.8 8.5 90 35-129 191-294 (374)
303 3oqb_A Oxidoreductase; structu 97.5 0.00022 7.6E-09 62.1 8.3 84 37-125 7-111 (383)
304 1e3i_A Alcohol dehydrogenase, 97.5 0.00035 1.2E-08 60.7 9.4 90 35-129 195-298 (376)
305 3csu_A Protein (aspartate carb 97.5 0.00052 1.8E-08 58.6 10.2 96 33-128 151-267 (310)
306 3ip3_A Oxidoreductase, putativ 97.5 8.7E-05 3E-09 63.7 5.4 64 37-101 3-76 (337)
307 3ldh_A Lactate dehydrogenase; 97.5 8.1E-05 2.8E-09 64.2 5.2 93 35-128 20-138 (330)
308 1b7g_O Protein (glyceraldehyde 97.5 0.00016 5.5E-09 62.6 7.0 67 37-103 2-88 (340)
309 1obb_A Maltase, alpha-glucosid 97.5 7.8E-05 2.7E-09 67.5 5.2 67 36-102 3-87 (480)
310 3sds_A Ornithine carbamoyltran 97.5 0.00085 2.9E-08 58.3 11.5 96 33-128 185-308 (353)
311 4amu_A Ornithine carbamoyltran 97.5 0.00062 2.1E-08 59.4 10.6 96 33-128 177-300 (365)
312 1ml4_A Aspartate transcarbamoy 97.5 0.00026 9E-09 60.4 8.0 95 33-127 152-267 (308)
313 4a8p_A Putrescine carbamoyltra 97.5 0.00057 1.9E-08 59.4 10.1 95 33-128 150-270 (355)
314 1duv_G Octase-1, ornithine tra 97.5 0.00031 1.1E-08 60.6 8.3 97 33-129 152-275 (333)
315 3uko_A Alcohol dehydrogenase c 97.5 0.00024 8.1E-09 61.9 7.7 90 35-129 193-296 (378)
316 2fzw_A Alcohol dehydrogenase c 97.5 0.00034 1.2E-08 60.7 8.6 90 35-129 190-293 (373)
317 1oth_A Protein (ornithine tran 97.5 0.00082 2.8E-08 57.7 10.8 95 33-127 152-270 (321)
318 2dt5_A AT-rich DNA-binding pro 97.5 0.00011 3.7E-09 59.5 5.0 65 36-101 80-149 (211)
319 1u8x_X Maltose-6'-phosphate gl 97.5 9.9E-05 3.4E-09 66.7 5.2 67 36-102 28-112 (472)
320 1e3j_A NADP(H)-dependent ketos 97.5 0.0004 1.4E-08 59.7 8.9 91 35-130 168-273 (352)
321 3r7f_A Aspartate carbamoyltran 97.5 0.00031 1.1E-08 59.8 8.0 93 33-128 144-250 (304)
322 3r6d_A NAD-dependent epimerase 97.5 0.00036 1.2E-08 55.7 7.9 91 37-131 6-110 (221)
323 3ff4_A Uncharacterized protein 97.5 0.00034 1.2E-08 51.7 7.0 99 37-148 5-107 (122)
324 1ez4_A Lactate dehydrogenase; 97.5 0.00035 1.2E-08 59.9 8.1 98 36-135 5-126 (318)
325 2zqz_A L-LDH, L-lactate dehydr 97.5 0.0003 1E-08 60.5 7.7 98 36-135 9-130 (326)
326 3qvo_A NMRA family protein; st 97.4 0.00023 7.7E-09 57.6 6.4 97 34-132 21-128 (236)
327 3upl_A Oxidoreductase; rossman 97.4 0.00026 8.8E-09 63.4 7.2 108 37-148 24-160 (446)
328 2tmg_A Protein (glutamate dehy 97.4 0.0014 4.9E-08 58.1 11.9 113 31-153 204-337 (415)
329 2d8a_A PH0655, probable L-thre 97.4 0.0001 3.4E-09 63.5 4.4 90 35-129 167-268 (348)
330 3d6n_B Aspartate carbamoyltran 97.4 0.00043 1.5E-08 58.6 8.1 69 33-102 143-214 (291)
331 1iz0_A Quinone oxidoreductase; 97.4 0.00016 5.5E-09 60.9 5.5 88 35-129 125-219 (302)
332 3ip1_A Alcohol dehydrogenase, 97.4 0.00034 1.2E-08 61.5 7.8 92 34-129 212-319 (404)
333 4a7p_A UDP-glucose dehydrogena 97.4 0.0006 2E-08 61.1 9.4 102 32-138 318-430 (446)
334 1pl8_A Human sorbitol dehydrog 97.4 0.00024 8.3E-09 61.3 6.7 91 35-130 171-275 (356)
335 1rjw_A ADH-HT, alcohol dehydro 97.4 0.00017 5.9E-09 61.8 5.7 91 35-130 164-263 (339)
336 3tl2_A Malate dehydrogenase; c 97.4 0.00043 1.5E-08 59.3 8.1 101 34-137 6-134 (315)
337 3do5_A HOM, homoserine dehydro 97.4 0.00039 1.3E-08 59.9 7.8 111 37-148 3-136 (327)
338 3keo_A Redox-sensing transcrip 97.4 0.00031 1.1E-08 56.9 6.7 67 36-102 84-158 (212)
339 3ew7_A LMO0794 protein; Q8Y8U8 97.4 0.0009 3.1E-08 52.8 9.4 93 37-130 1-104 (221)
340 3h2s_A Putative NADH-flavin re 97.4 0.00081 2.8E-08 53.4 9.1 93 37-129 1-105 (224)
341 1lnq_A MTHK channels, potassiu 97.4 0.00023 8E-09 60.9 6.2 87 36-126 115-209 (336)
342 3gg2_A Sugar dehydrogenase, UD 97.4 0.00097 3.3E-08 59.8 10.4 95 32-130 314-420 (450)
343 4ina_A Saccharopine dehydrogen 97.4 0.00011 3.8E-09 65.0 4.2 89 37-130 2-109 (405)
344 3uog_A Alcohol dehydrogenase; 97.4 0.00019 6.4E-09 62.2 5.5 89 35-129 189-288 (363)
345 3aog_A Glutamate dehydrogenase 97.4 0.0017 6E-08 57.9 11.8 108 32-148 231-358 (440)
346 1ys4_A Aspartate-semialdehyde 97.4 0.00041 1.4E-08 60.2 7.7 87 37-129 9-115 (354)
347 1mld_A Malate dehydrogenase; o 97.4 0.00075 2.6E-08 57.7 9.2 98 37-137 1-124 (314)
348 3q2o_A Phosphoribosylaminoimid 97.4 0.00023 7.9E-09 62.2 6.0 68 32-99 10-82 (389)
349 2cf5_A Atccad5, CAD, cinnamyl 97.4 0.00022 7.4E-09 61.7 5.7 90 35-129 180-276 (357)
350 4ej6_A Putative zinc-binding d 97.4 0.00018 6.1E-09 62.6 5.2 90 35-129 182-285 (370)
351 2q3e_A UDP-glucose 6-dehydroge 97.4 0.0011 3.7E-08 59.6 10.4 97 33-131 326-445 (467)
352 2w37_A Ornithine carbamoyltran 97.4 0.00091 3.1E-08 58.2 9.5 97 33-129 173-296 (359)
353 3ijp_A DHPR, dihydrodipicolina 97.4 0.00049 1.7E-08 58.2 7.6 89 37-130 22-121 (288)
354 2yv1_A Succinyl-COA ligase [AD 97.3 0.00027 9.1E-09 60.0 6.0 105 36-148 13-123 (294)
355 3s2e_A Zinc-containing alcohol 97.3 0.00015 5.3E-09 62.1 4.6 90 35-129 166-264 (340)
356 3lk7_A UDP-N-acetylmuramoylala 97.3 0.00031 1.1E-08 62.9 6.6 116 32-147 5-139 (451)
357 3ius_A Uncharacterized conserv 97.3 0.00045 1.5E-08 57.1 7.1 66 36-103 5-74 (286)
358 3grf_A Ornithine carbamoyltran 97.3 0.0015 5.2E-08 56.2 10.5 96 33-128 158-283 (328)
359 2hcy_A Alcohol dehydrogenase 1 97.3 0.00037 1.3E-08 59.9 6.6 91 35-130 169-271 (347)
360 3eag_A UDP-N-acetylmuramate:L- 97.3 0.001 3.6E-08 56.9 9.5 111 36-146 4-134 (326)
361 1lu9_A Methylene tetrahydromet 97.3 0.00022 7.6E-09 59.9 5.1 38 32-69 115-153 (287)
362 2bma_A Glutamate dehydrogenase 97.3 0.0015 5E-08 58.7 10.6 111 31-148 247-386 (470)
363 2d4a_B Malate dehydrogenase; a 97.3 0.00033 1.1E-08 59.7 6.2 95 38-135 1-121 (308)
364 1cf2_P Protein (glyceraldehyde 97.3 0.00021 7.3E-09 61.8 4.9 67 37-103 2-89 (337)
365 2ozp_A N-acetyl-gamma-glutamyl 97.3 0.00096 3.3E-08 57.8 8.9 86 37-129 5-100 (345)
366 2nqt_A N-acetyl-gamma-glutamyl 97.3 0.00077 2.6E-08 58.6 8.2 88 37-132 10-114 (352)
367 1hdo_A Biliverdin IX beta redu 97.3 0.00031 1.1E-08 54.8 5.2 67 36-102 3-77 (206)
368 4f3y_A DHPR, dihydrodipicolina 97.3 0.00038 1.3E-08 58.5 6.0 89 37-130 8-106 (272)
369 1pqw_A Polyketide synthase; ro 97.3 0.00015 5.3E-09 57.0 3.3 89 35-129 38-138 (198)
370 1xyg_A Putative N-acetyl-gamma 97.2 0.0012 4.2E-08 57.4 9.2 87 36-129 16-113 (359)
371 2yfq_A Padgh, NAD-GDH, NAD-spe 97.2 0.00053 1.8E-08 61.0 6.9 108 32-148 208-340 (421)
372 2h6e_A ADH-4, D-arabinose 1-de 97.2 0.00019 6.5E-09 61.6 4.0 90 35-129 170-270 (344)
373 2xxj_A L-LDH, L-lactate dehydr 97.2 0.00065 2.2E-08 58.0 7.3 97 37-135 1-121 (310)
374 4aj2_A L-lactate dehydrogenase 97.2 0.00088 3E-08 57.8 8.1 100 33-135 16-141 (331)
375 3aoe_E Glutamate dehydrogenase 97.2 0.0043 1.5E-07 55.0 12.6 108 32-148 214-337 (419)
376 4eye_A Probable oxidoreductase 97.2 0.00045 1.5E-08 59.3 6.1 88 35-128 159-257 (342)
377 3gms_A Putative NADPH:quinone 97.2 0.00046 1.6E-08 59.1 6.2 89 35-129 144-244 (340)
378 3orq_A N5-carboxyaminoimidazol 97.2 0.00053 1.8E-08 59.8 6.6 67 33-99 9-80 (377)
379 3fi9_A Malate dehydrogenase; s 97.2 0.00064 2.2E-08 58.9 6.9 68 34-101 6-85 (343)
380 3fpc_A NADP-dependent alcohol 97.2 0.00026 8.9E-09 61.0 4.0 89 35-128 166-266 (352)
381 3k92_A NAD-GDH, NAD-specific g 97.2 0.0022 7.7E-08 56.9 10.1 109 31-148 216-343 (424)
382 3goh_A Alcohol dehydrogenase, 97.2 0.00044 1.5E-08 58.5 5.4 87 35-128 142-229 (315)
383 1v3u_A Leukotriene B4 12- hydr 97.2 0.00033 1.1E-08 59.7 4.6 89 35-129 145-245 (333)
384 2yv2_A Succinyl-COA synthetase 97.2 0.00069 2.4E-08 57.5 6.5 105 36-148 13-124 (297)
385 2b5w_A Glucose dehydrogenase; 97.1 0.00065 2.2E-08 58.6 6.5 91 34-129 171-274 (357)
386 1f8f_A Benzyl alcohol dehydrog 97.1 0.00026 9E-09 61.4 4.0 90 35-129 190-290 (371)
387 4a0s_A Octenoyl-COA reductase/ 97.1 0.00094 3.2E-08 59.4 7.4 89 35-129 220-337 (447)
388 4g65_A TRK system potassium up 97.1 0.00044 1.5E-08 62.2 5.2 69 35-103 2-79 (461)
389 3c8m_A Homoserine dehydrogenas 97.1 0.00046 1.6E-08 59.5 5.1 111 37-148 7-142 (331)
390 1s6y_A 6-phospho-beta-glucosid 97.1 0.00047 1.6E-08 61.9 5.4 67 36-102 7-93 (450)
391 3g79_A NDP-N-acetyl-D-galactos 97.1 0.0017 5.6E-08 58.8 9.0 100 31-138 348-458 (478)
392 2yyy_A Glyceraldehyde-3-phosph 97.1 0.0011 3.7E-08 57.5 7.4 87 37-128 3-113 (343)
393 2y0c_A BCEC, UDP-glucose dehyd 97.1 0.003 1E-07 57.0 10.6 99 33-136 325-445 (478)
394 4b7c_A Probable oxidoreductase 97.1 0.00035 1.2E-08 59.7 4.1 89 35-129 149-249 (336)
395 3cps_A Glyceraldehyde 3-phosph 97.1 0.0017 5.7E-08 56.5 8.4 87 37-129 18-139 (354)
396 3mw9_A GDH 1, glutamate dehydr 97.1 0.0056 1.9E-07 55.3 12.0 106 33-148 241-366 (501)
397 3fbg_A Putative arginate lyase 97.1 0.00042 1.5E-08 59.5 4.6 89 35-128 150-248 (346)
398 3jyn_A Quinone oxidoreductase; 97.1 0.00055 1.9E-08 58.2 5.3 89 35-129 140-240 (325)
399 3tqh_A Quinone oxidoreductase; 97.1 0.00056 1.9E-08 58.1 5.3 88 35-129 152-246 (321)
400 1smk_A Malate dehydrogenase, g 97.1 0.00094 3.2E-08 57.3 6.7 96 36-135 8-130 (326)
401 2bka_A CC3, TAT-interacting pr 97.1 0.00094 3.2E-08 53.7 6.3 70 34-103 16-95 (242)
402 1zud_1 Adenylyltransferase THI 97.1 0.00044 1.5E-08 57.2 4.4 107 14-128 10-150 (251)
403 1js1_X Transcarbamylase; alpha 97.1 0.0033 1.1E-07 53.9 9.9 67 33-100 166-237 (324)
404 2ejw_A HDH, homoserine dehydro 97.1 0.00041 1.4E-08 59.9 4.2 102 37-145 4-116 (332)
405 1dih_A Dihydrodipicolinate red 97.1 0.00072 2.5E-08 56.7 5.6 90 36-130 5-105 (273)
406 4dup_A Quinone oxidoreductase; 97.1 0.00048 1.6E-08 59.4 4.6 89 35-129 167-266 (353)
407 1u8f_O GAPDH, glyceraldehyde-3 97.0 0.002 7E-08 55.5 8.5 31 37-67 4-35 (335)
408 2ph5_A Homospermidine synthase 97.0 0.0013 4.3E-08 59.3 7.4 34 37-70 14-51 (480)
409 4ekn_B Aspartate carbamoyltran 97.0 0.0037 1.3E-07 53.2 9.9 68 33-100 148-226 (306)
410 1zq6_A Otcase, ornithine carba 97.0 0.0071 2.4E-07 52.6 11.7 93 34-127 188-314 (359)
411 3qwb_A Probable quinone oxidor 97.0 0.00046 1.6E-08 58.9 4.2 89 35-129 148-248 (334)
412 1kyq_A Met8P, siroheme biosynt 97.0 0.00031 1.1E-08 59.1 2.9 38 32-69 9-46 (274)
413 1pjq_A CYSG, siroheme synthase 97.0 0.0011 3.8E-08 59.5 6.7 71 32-104 8-83 (457)
414 3dr3_A N-acetyl-gamma-glutamyl 97.0 0.0011 3.9E-08 57.2 6.5 89 37-130 5-108 (337)
415 1vj0_A Alcohol dehydrogenase, 97.0 0.00059 2E-08 59.5 4.8 90 35-129 195-299 (380)
416 2o3j_A UDP-glucose 6-dehydroge 97.0 0.0035 1.2E-07 56.5 10.0 103 33-138 332-455 (481)
417 1v9l_A Glutamate dehydrogenase 97.0 0.0044 1.5E-07 55.0 10.4 109 32-148 206-339 (421)
418 3e48_A Putative nucleoside-dip 97.0 0.0015 5E-08 54.1 7.0 66 37-102 1-75 (289)
419 2j3h_A NADP-dependent oxidored 97.0 0.00059 2E-08 58.4 4.5 89 35-129 155-256 (345)
420 1ebf_A Homoserine dehydrogenas 97.0 0.00072 2.5E-08 58.9 5.1 90 37-133 5-120 (358)
421 2dq4_A L-threonine 3-dehydroge 97.0 0.00047 1.6E-08 59.1 3.8 89 35-129 164-263 (343)
422 3r3j_A Glutamate dehydrogenase 97.0 0.0039 1.3E-07 55.8 9.7 110 31-148 234-373 (456)
423 2c0c_A Zinc binding alcohol de 97.0 0.0005 1.7E-08 59.5 3.9 89 35-129 163-262 (362)
424 2pzm_A Putative nucleotide sug 96.9 0.00084 2.9E-08 56.9 5.2 73 30-102 14-98 (330)
425 2dph_A Formaldehyde dismutase; 96.9 0.00054 1.9E-08 60.0 4.0 95 35-129 185-300 (398)
426 2zcu_A Uncharacterized oxidore 96.9 0.00093 3.2E-08 55.0 5.2 64 38-101 1-74 (286)
427 2we8_A Xanthine dehydrogenase; 96.9 0.0031 1.1E-07 55.5 8.6 93 36-148 204-299 (386)
428 3e5r_O PP38, glyceraldehyde-3- 96.9 0.0019 6.4E-08 55.8 7.1 31 37-67 4-35 (337)
429 1vkn_A N-acetyl-gamma-glutamyl 96.9 0.0031 1E-07 54.8 8.3 86 36-129 13-108 (351)
430 3k31_A Enoyl-(acyl-carrier-pro 96.9 0.0025 8.6E-08 53.5 7.6 40 31-70 25-67 (296)
431 4dvj_A Putative zinc-dependent 96.9 0.0021 7.2E-08 55.6 7.3 89 35-128 171-270 (363)
432 2vn8_A Reticulon-4-interacting 96.9 0.0032 1.1E-07 54.6 8.4 91 35-130 183-282 (375)
433 2yfk_A Aspartate/ornithine car 96.9 0.0024 8.1E-08 56.6 7.6 67 34-100 186-271 (418)
434 3pi7_A NADH oxidoreductase; gr 96.9 0.0027 9.3E-08 54.4 7.9 88 36-129 165-264 (349)
435 3dqp_A Oxidoreductase YLBE; al 96.9 0.0009 3.1E-08 53.2 4.3 67 37-103 1-74 (219)
436 3gpi_A NAD-dependent epimerase 96.8 0.00097 3.3E-08 55.2 4.6 67 35-101 2-72 (286)
437 4e4t_A Phosphoribosylaminoimid 96.8 0.0015 5.1E-08 57.9 5.9 66 33-98 32-102 (419)
438 1xgk_A Nitrogen metabolite rep 96.8 0.0016 5.3E-08 56.2 5.9 97 35-131 4-115 (352)
439 3hhp_A Malate dehydrogenase; M 96.8 0.0037 1.3E-07 53.4 8.1 101 37-139 1-127 (312)
440 1b8p_A Protein (malate dehydro 96.8 0.0028 9.5E-08 54.4 7.4 66 36-101 5-92 (329)
441 3i6i_A Putative leucoanthocyan 96.8 0.0023 7.9E-08 54.5 6.9 68 34-101 8-92 (346)
442 3m6i_A L-arabinitol 4-dehydrog 96.8 0.0021 7.1E-08 55.4 6.6 90 35-129 179-284 (363)
443 1bgv_A Glutamate dehydrogenase 96.8 0.007 2.4E-07 54.2 10.1 111 31-148 225-365 (449)
444 3oig_A Enoyl-[acyl-carrier-pro 96.8 0.0038 1.3E-07 51.1 8.0 37 33-69 4-43 (266)
445 3nx4_A Putative oxidoreductase 96.8 0.0012 4.2E-08 55.8 5.0 87 36-129 148-242 (324)
446 1jvb_A NAD(H)-dependent alcoho 96.8 0.0012 4.1E-08 56.7 4.9 90 35-129 170-272 (347)
447 2r00_A Aspartate-semialdehyde 96.8 0.001 3.4E-08 57.5 4.4 87 37-129 4-97 (336)
448 3ojo_A CAP5O; rossmann fold, c 96.8 0.0059 2E-07 54.4 9.5 84 33-127 312-406 (431)
449 2x4g_A Nucleoside-diphosphate- 96.8 0.0036 1.2E-07 52.8 7.8 66 36-101 13-86 (342)
450 2r6j_A Eugenol synthase 1; phe 96.8 0.0054 1.8E-07 51.4 8.8 66 36-101 11-88 (318)
451 3rui_A Ubiquitin-like modifier 96.8 0.0019 6.7E-08 55.8 6.0 93 32-128 30-171 (340)
452 2gas_A Isoflavone reductase; N 96.8 0.0029 1E-07 52.5 7.0 67 36-102 2-86 (307)
453 3mtj_A Homoserine dehydrogenas 96.8 0.0021 7.3E-08 57.5 6.5 108 36-148 10-131 (444)
454 2j8z_A Quinone oxidoreductase; 96.8 0.0014 4.9E-08 56.4 5.2 89 35-129 162-262 (354)
455 1kol_A Formaldehyde dehydrogen 96.8 0.0015 5.1E-08 57.1 5.4 95 35-129 185-301 (398)
456 3gaz_A Alcohol dehydrogenase s 96.8 0.0012 4E-08 56.7 4.6 90 35-131 150-249 (343)
457 1qor_A Quinone oxidoreductase; 96.8 0.0012 4.2E-08 56.0 4.6 89 35-129 140-240 (327)
458 3q98_A Transcarbamylase; rossm 96.7 0.0077 2.6E-07 53.1 9.8 68 33-100 188-274 (399)
459 2jl1_A Triphenylmethane reduct 96.7 0.002 6.8E-08 53.0 5.8 66 37-102 1-76 (287)
460 3jv7_A ADH-A; dehydrogenase, n 96.7 0.0012 4.1E-08 56.5 4.6 90 35-129 171-271 (345)
461 2x5o_A UDP-N-acetylmuramoylala 96.7 0.0016 5.3E-08 58.0 5.4 112 33-145 2-129 (439)
462 3ijr_A Oxidoreductase, short c 96.7 0.0044 1.5E-07 51.8 8.0 38 32-69 43-81 (291)
463 2rir_A Dipicolinate synthase, 96.7 0.0043 1.5E-07 52.3 7.9 107 34-148 5-121 (300)
464 3krt_A Crotonyl COA reductase; 96.7 0.00088 3E-08 59.8 3.8 88 35-128 228-344 (456)
465 1gu7_A Enoyl-[acyl-carrier-pro 96.7 0.0047 1.6E-07 53.1 8.2 89 35-129 166-276 (364)
466 2wm3_A NMRA-like family domain 96.7 0.0035 1.2E-07 52.1 7.2 66 36-101 5-81 (299)
467 1xa0_A Putative NADPH dependen 96.7 0.0016 5.4E-08 55.4 5.0 86 38-129 152-247 (328)
468 1y1p_A ARII, aldehyde reductas 96.7 0.0022 7.4E-08 54.0 5.8 69 33-101 8-92 (342)
469 3gqv_A Enoyl reductase; medium 96.7 0.005 1.7E-07 53.3 8.3 89 34-128 163-263 (371)
470 1p9l_A Dihydrodipicolinate red 96.7 0.0079 2.7E-07 49.6 9.0 74 37-130 1-78 (245)
471 2ep5_A 350AA long hypothetical 96.7 0.004 1.4E-07 53.9 7.5 87 37-129 5-109 (350)
472 4id9_A Short-chain dehydrogena 96.7 0.0022 7.6E-08 54.3 5.7 72 31-102 14-87 (347)
473 1tt7_A YHFP; alcohol dehydroge 96.7 0.0018 6.2E-08 55.0 5.1 86 38-129 153-248 (330)
474 2pd4_A Enoyl-[acyl-carrier-pro 96.7 0.0025 8.4E-08 52.7 5.8 38 33-70 3-43 (275)
475 2eih_A Alcohol dehydrogenase; 96.7 0.002 6.9E-08 55.1 5.4 89 35-129 166-266 (343)
476 1hdg_O Holo-D-glyceraldehyde-3 96.7 0.0021 7.2E-08 55.4 5.5 31 37-67 1-34 (332)
477 3dhn_A NAD-dependent epimerase 96.7 0.0011 3.9E-08 52.7 3.6 66 37-103 5-78 (227)
478 4a2c_A Galactitol-1-phosphate 96.7 0.0033 1.1E-07 53.6 6.7 91 34-129 159-261 (346)
479 3ruf_A WBGU; rossmann fold, UD 96.7 0.004 1.4E-07 52.8 7.2 70 33-102 22-110 (351)
480 3nv9_A Malic enzyme; rossmann 96.6 0.014 4.8E-07 52.2 10.7 135 31-179 214-367 (487)
481 1yb5_A Quinone oxidoreductase; 96.6 0.0015 5.2E-08 56.3 4.5 88 35-128 170-269 (351)
482 1qyc_A Phenylcoumaran benzylic 96.6 0.003 1E-07 52.5 6.0 67 36-102 4-87 (308)
483 2csu_A 457AA long hypothetical 96.6 0.0064 2.2E-07 54.6 8.5 106 34-148 6-123 (457)
484 1wly_A CAAR, 2-haloacrylate re 96.6 0.0017 5.7E-08 55.3 4.5 46 35-80 145-191 (333)
485 3hn7_A UDP-N-acetylmuramate-L- 96.6 0.0064 2.2E-07 55.4 8.5 113 34-146 17-148 (524)
486 1zsy_A Mitochondrial 2-enoyl t 96.6 0.011 3.6E-07 50.9 9.5 88 35-128 167-270 (357)
487 3pxx_A Carveol dehydrogenase; 96.6 0.0057 1.9E-07 50.5 7.5 38 31-68 5-43 (287)
488 2zb4_A Prostaglandin reductase 96.6 0.0021 7.2E-08 55.3 4.9 89 35-129 158-261 (357)
489 3grk_A Enoyl-(acyl-carrier-pro 96.6 0.0034 1.2E-07 52.6 6.1 38 32-69 27-67 (293)
490 1qyd_A Pinoresinol-lariciresin 96.6 0.023 7.7E-07 47.2 11.2 67 36-102 4-86 (313)
491 3m2p_A UDP-N-acetylglucosamine 96.6 0.0043 1.5E-07 51.8 6.7 65 36-102 2-72 (311)
492 2c5a_A GDP-mannose-3', 5'-epim 96.6 0.0067 2.3E-07 52.3 8.1 69 33-101 26-102 (379)
493 3h8v_A Ubiquitin-like modifier 96.5 0.0032 1.1E-07 53.3 5.7 38 32-69 32-70 (292)
494 3nrc_A Enoyl-[acyl-carrier-pro 96.5 0.018 6E-07 47.7 10.3 39 31-69 21-62 (280)
495 3ing_A Homoserine dehydrogenas 96.5 0.0047 1.6E-07 53.0 6.8 110 37-148 5-138 (325)
496 4h31_A Otcase, ornithine carba 96.5 0.013 4.3E-07 51.0 9.5 97 32-128 177-300 (358)
497 2ydy_A Methionine adenosyltran 96.5 0.0029 1E-07 52.8 5.3 65 36-101 2-69 (315)
498 3b1j_A Glyceraldehyde 3-phosph 96.5 0.0036 1.2E-07 54.1 5.8 30 37-66 3-35 (339)
499 2dkn_A 3-alpha-hydroxysteroid 96.5 0.0023 7.8E-08 51.6 4.3 65 37-101 2-71 (255)
500 3cmc_O GAPDH, glyceraldehyde-3 96.5 0.0061 2.1E-07 52.5 7.1 31 37-67 2-33 (334)
No 1
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=100.00 E-value=1.1e-56 Score=394.03 Aligned_cols=221 Identities=83% Similarity=1.393 Sum_probs=207.3
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (221)
++||++.|++..+++.+++|.|........+.+|.|+||||||+|.||+.+|+++++||++|++||+++...+.+.+.|+
T Consensus 129 ~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~ 208 (351)
T 3jtm_A 129 MRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGA 208 (351)
T ss_dssp HHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCC
T ss_pred HHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCC
Confidence 57999999999999999999998543223467899999999999999999999999999999999998766777777788
Q ss_pred eecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCC
Q 027577 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (221)
Q Consensus 81 ~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~ 160 (221)
..+.++++++++||+|++|+|++++|+++++++.++.||+|++|||+|||+++|+++|+++|++|+|.||++|||++||+
T Consensus 209 ~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EP~ 288 (351)
T 3jtm_A 209 KFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQPA 288 (351)
T ss_dssp EECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSC
T ss_pred eEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCCccEEEeCCCCCCCC
Confidence 87789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCCCCccccccCCccCCCCC
Q 027577 161 PKDHPWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAPQYR 221 (221)
Q Consensus 161 ~~~~~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~~~~n~v~~~~~~~~~~~ 221 (221)
|.+||||++||+++|||+||+|.| .++...+.+|+.+|++|+++.+.|+|+..++|+.+||
T Consensus 289 ~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~nl~~~~~g~~~~~~~~i~~~~~~~~~~~ 351 (351)
T 3jtm_A 289 PKDHPWRYMPNQAMTPHTSGTTIDAQLRYAAGTKDMLERYFKGEDFPTENYIVKDGELAPQYR 351 (351)
T ss_dssp CTTCGGGTSTTBCCCCSCGGGSHHHHHHHHHHHHHHHHHHHHTCCCCGGGEEEETTEECGGGC
T ss_pred CCCChhhcCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCCceEEecCCccccccC
Confidence 999999999999999999999999 6777889999999999998889999999999999998
No 2
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=2.3e-52 Score=365.72 Aligned_cols=205 Identities=28% Similarity=0.498 Sum_probs=186.5
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCc-ccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcC
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAG-VAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG 79 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~-~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g 79 (221)
++||++.|++..+++.+++|.|.... ....+.+|.||||||||+|.||+.+|+++++||++|++||+++...+... +
T Consensus 137 ~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--g 214 (345)
T 4g2n_A 137 LLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALEE--G 214 (345)
T ss_dssp HHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT--T
T ss_pred HHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhhc--C
Confidence 47999999999999999999997532 12347899999999999999999999999999999999999765544332 7
Q ss_pred ceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCC
Q 027577 80 AKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQP 159 (221)
Q Consensus 80 ~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep 159 (221)
+..++++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||
T Consensus 215 ~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP 294 (345)
T 4g2n_A 215 AIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDVFANEP 294 (345)
T ss_dssp CEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT
T ss_pred CeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCCCCCC
Confidence 77767999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCCCCcccc
Q 027577 160 APKDHPWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDFPVQNYI 210 (221)
Q Consensus 160 ~~~~~~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~~~~n~v 210 (221)
+.++|||++||+++|||+||+|.| .++...+.+|+.+|++|+++ .|.|
T Consensus 295 -~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~l~g~~~--~~~V 344 (345)
T 4g2n_A 295 -AIDPRYRSLDNIFLTPHIGSATHETRDAMGWLLIQGIEALNQSDVP--DNLI 344 (345)
T ss_dssp -SCCTTGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCC--TTBC
T ss_pred -CCCchHHhCCCEEEcCccCcCCHHHHHHHHHHHHHHHHHHHcCCCC--CCCc
Confidence 889999999999999999999999 77778899999999999974 4554
No 3
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=100.00 E-value=9.5e-53 Score=371.08 Aligned_cols=219 Identities=49% Similarity=0.886 Sum_probs=198.5
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCe-EEEEcCCCCChhHHHhcC
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCN-LLYHDRVKMDPQLEKETG 79 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~-V~~~d~~~~~~~~~~~~g 79 (221)
++||++.|++..+++.+++|.|........+.+|.|+||||||+|+||+.+|++++++|++ |++||++....+.+...|
T Consensus 129 ~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g 208 (364)
T 2j6i_A 129 MTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVG 208 (364)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTT
T ss_pred HHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcC
Confidence 4799999999999999999999743221245789999999999999999999999999997 999999776666666778
Q ss_pred ceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCC
Q 027577 80 AKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQP 159 (221)
Q Consensus 80 ~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep 159 (221)
+....++++++++||+|++|+|++++|+++++++.++.||++++|||++||+++|+++|.++|++|+|.||+||||++||
T Consensus 209 ~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf~~EP 288 (364)
T 2j6i_A 209 ARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYGGDVWFPQP 288 (364)
T ss_dssp EEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSS
T ss_pred cEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCcEEEEecCCCCC
Confidence 77767899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCC--C---CeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCC-CCCCccccccCCccCCC
Q 027577 160 APKDHPWRYM--P---NQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGE-DFPVQNYIVKAGELAPQ 219 (221)
Q Consensus 160 ~~~~~~l~~~--~---n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~-~~~~~n~v~~~~~~~~~ 219 (221)
+|.+||||.+ | |+++|||+|++|.+ .++...+.+|+.+|++|+ ++++.|+|+.+.+|++|
T Consensus 289 ~~~~~pL~~~~~~~~~nvilTPHia~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~~n~v~~~~~y~~~ 356 (364)
T 2j6i_A 289 APKDHPWRDMRNKYGAGNAMTPHYSGTTLDAQTRYAQGTVNILESFFTGKFDYRPQDIILLNGEYGTK 356 (364)
T ss_dssp CCTTCHHHHCCCTTSCCEEECCSCGGGSHHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEBTTBC---
T ss_pred CCCCChHHhccCCccCcEEECCccCcCCHHHHHHHHHHHHHHHHHHHcCCCCCCCCceecCCcCcchh
Confidence 9999999999 9 99999999999999 567778999999999998 55899999999999987
No 4
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=5.7e-53 Score=365.80 Aligned_cols=208 Identities=23% Similarity=0.343 Sum_probs=186.3
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (221)
++||++.|++..+++.+++|.|... .+.+|.|+||||||+|.||+.+|+++++||++|++||+++...+.....
T Consensus 108 ~~~L~~~R~~~~~~~~~~~g~W~~~----~~~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~-- 181 (315)
T 3pp8_A 108 SQVLHWFRRFDDYQALKNQALWKPL----PEYTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESY-- 181 (315)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCCC----CCCCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTCEEE--
T ss_pred HHHHHHHhCChHHHHHHHhcccCCC----CCCCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhhhhh--
Confidence 4799999999999999999999754 3578999999999999999999999999999999999876433211111
Q ss_pred eecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCC
Q 027577 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (221)
Q Consensus 81 ~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~ 160 (221)
....++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||+
T Consensus 182 ~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl 261 (315)
T 3pp8_A 182 VGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPL 261 (315)
T ss_dssp ESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSC
T ss_pred cccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCCCCCC
Confidence 11257999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCeEECCCCCcCCHHHHHHHHHHHHHHHHHcCCCCCCccccccCCcc
Q 027577 161 PKDHPWRYMPNQAMTPHVSGTTIDLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGEL 216 (221)
Q Consensus 161 ~~~~~l~~~~n~~~tPH~a~~t~~~~~~~~~~~~~~~~~~g~~~~~~n~v~~~~~~ 216 (221)
|.+||||++||+++|||+|++|.+.++...+.+|+.+|++|++ +.|.|+.+.+|
T Consensus 262 ~~~~pL~~~~nvilTPHia~~t~~~~~~~~~~~ni~~~~~G~~--~~~~V~~~~GY 315 (315)
T 3pp8_A 262 PQESPLWRHPRVAMTPHIAAVTRPAEAIDYISRTITQLEKGEP--VTGQVDRARGY 315 (315)
T ss_dssp CTTCGGGGCTTEEECSSCSSCCCHHHHHHHHHHHHHHHHHTCC--CCCBCCCC---
T ss_pred CCCChhhcCCCEEECCCCCcccHHHHHHHHHHHHHHHHHcCCC--CCceECcccCC
Confidence 9999999999999999999999988888889999999999997 47888888776
No 5
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=2.7e-53 Score=370.63 Aligned_cols=208 Identities=28% Similarity=0.401 Sum_probs=186.1
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (221)
++||++.|++...++.+++|.|.... ...+.+|.|+|+||||+|+||+.+|+++++|||+|++||+... +.....++
T Consensus 107 ~l~L~~~r~~~~~~~~~~~~~~~~~~-~~~~~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~--~~~~~~~~ 183 (334)
T 3kb6_A 107 AMILTLVKRLKRIEDRVKKLNFSQDS-EILARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKR--EDLKEKGC 183 (334)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCCCG-GGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHTTC
T ss_pred HHHHHHhhcccccccccccccccccc-ccccceecCcEEEEECcchHHHHHHHhhcccCceeeecCCccc--hhhhhcCc
Confidence 47999999999999999999987543 2357899999999999999999999999999999999998643 33445566
Q ss_pred eecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCC
Q 027577 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (221)
Q Consensus 81 ~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~ 160 (221)
.. .++++++++||+|++|+|+|++|+++|+++.|+.||+|++|||+|||++||++||+++|++|+|.||+||||++||+
T Consensus 184 ~~-~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl 262 (334)
T 3kb6_A 184 VY-TSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEI 262 (334)
T ss_dssp EE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHH
T ss_pred ee-cCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCCC
Confidence 65 48999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCC---------------CCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCC-CCcccccc
Q 027577 161 PKDH---------------PWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDF-PVQNYIVK 212 (221)
Q Consensus 161 ~~~~---------------~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~-~~~n~v~~ 212 (221)
+.++ |||.+|||++|||+||+|.| .++...+.+|+.+|++|++. ..+|.|+-
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~L~~~~nvilTPHia~~T~ea~~~~~~~~~~ni~~~l~Ge~~~~~~n~v~~ 332 (334)
T 3kb6_A 263 LILKKYTEGKATDKNLKILELACKDNVIITPHIAYYTDKSLERIREETVKVVKAFVKGDLEQIKGNFVVG 332 (334)
T ss_dssp HHTTGGGGTCCCHHHHHHHHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCGGGGGGGEEEC
T ss_pred cccccccccccccccccchhhccCCCEEECCchhhChHHHHHHHHHHHHHHHHHHHcCCCCcCCCCcCCC
Confidence 7766 57889999999999999999 77788899999999999976 45566653
No 6
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=1.5e-52 Score=363.99 Aligned_cols=211 Identities=23% Similarity=0.307 Sum_probs=186.6
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (221)
++||++.|++..+++.+++|.|... .+.+|.|+||||||+|.||+++|+++++||++|++||+++...+.+. +.
T Consensus 109 ~~~L~~~R~~~~~~~~~~~g~W~~~----~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--~~ 182 (324)
T 3hg7_A 109 GHLLSLMRQLPLYREQQKQRLWQSH----PYQGLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFD--QV 182 (324)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCCC----CCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTCS--EE
T ss_pred HHHHHHHhChHHHHHHHhhCCCcCC----CCcccccceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhhh--cc
Confidence 4799999999999999999999753 35689999999999999999999999999999999999764332211 12
Q ss_pred eecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCC
Q 027577 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (221)
Q Consensus 81 ~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~ 160 (221)
....++++++++||+|++|+|++++|+++++.+.|+.||+|++|||+|||+++|+++|+++|++|+|.||++|||++||+
T Consensus 183 ~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EPl 262 (324)
T 3hg7_A 183 YQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPL 262 (324)
T ss_dssp ECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSSSC
T ss_pred cccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCCCC
Confidence 23468999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCeEECCCCCcCCHHHHHHHHHHHHHHHHHcCCCCCCccccccCCccCCC
Q 027577 161 PKDHPWRYMPNQAMTPHVSGTTIDLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAPQ 219 (221)
Q Consensus 161 ~~~~~l~~~~n~~~tPH~a~~t~~~~~~~~~~~~~~~~~~g~~~~~~n~v~~~~~~~~~ 219 (221)
|.++|||++||+++|||+||+|.+.++...+.+|+.+|++|++ +.|.|+.+.++.|.
T Consensus 263 ~~~~pL~~~~nvilTPHia~~t~~~~~~~~~~~nl~~~~~G~~--~~~~V~~~~~~~~~ 319 (324)
T 3hg7_A 263 PADSPLWGQPNLIITPHNSAYSFPDDVAQIFVRNYIRFIDGQP--LDGKIDFDKGYEGH 319 (324)
T ss_dssp CTTCTTTTCTTEEECCSCSSCCCHHHHHHHHHHHHHHHHTTCC--CTTBCCCC------
T ss_pred CCCChhhcCCCEEEeCCCccccHHHHHHHHHHHHHHHHHcCCC--CcceEChhhhcccc
Confidence 9999999999999999999999888888889999999999997 46888888777653
No 7
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=4.8e-51 Score=359.38 Aligned_cols=214 Identities=23% Similarity=0.329 Sum_probs=185.5
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcc-cCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcC
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGV-AYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG 79 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~-~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g 79 (221)
++||++.|++..+++.+++|.|.+... ...+.+|.|+||||||+|.||+.+|+++++||++|++||++. ..+.+...|
T Consensus 140 ~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~-~~~~~~~~g 218 (365)
T 4hy3_A 140 GFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWL-PRSMLEENG 218 (365)
T ss_dssp HHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSS-CHHHHHHTT
T ss_pred HHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCC-CHHHHhhcC
Confidence 479999999999999999999654321 234679999999999999999999999999999999999975 455555677
Q ss_pred ceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCC
Q 027577 80 AKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQP 159 (221)
Q Consensus 80 ~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep 159 (221)
+.. .++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|. |+||||++||
T Consensus 219 ~~~-~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~EP 296 (365)
T 4hy3_A 219 VEP-ASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV-AASDVYPEEP 296 (365)
T ss_dssp CEE-CCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE-EEESCCSSSS
T ss_pred eee-CCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce-EEeeCCCCCC
Confidence 775 48999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCCCCCCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCCCCccccccCCccCCC
Q 027577 160 APKDHPWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAPQ 219 (221)
Q Consensus 160 ~~~~~~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~~~~n~v~~~~~~~~~ 219 (221)
++.++|||++||+++|||+||+|.| .++...+.+|+.+|++|+++ .|.++.+....+.
T Consensus 297 l~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~G~~~--~~~vn~~~~~~~~ 356 (365)
T 4hy3_A 297 LPLDHPVRSLKGFIRSAHRAGALDSAFKKMGDMVLEDMDLMDRGLPP--MRCKRAERETVSR 356 (365)
T ss_dssp CCTTCGGGTCTTEEECCSCSSCCHHHHHHHHHHHHHHHHHHHTTCCC--CSSEECCSCCC--
T ss_pred CCCCChhhcCCCEEECCccccCHHHHHHHHHHHHHHHHHHHHcCCCc--ccccccchhhhhh
Confidence 9999999999999999999999999 67778899999999999986 3444434333333
No 8
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=100.00 E-value=1.4e-51 Score=359.41 Aligned_cols=211 Identities=25% Similarity=0.402 Sum_probs=191.0
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (221)
++||++.|++..+++.+++|.|........+.+|.|+||||||+|.||+.+|++++++|++|++||+++...+.+...|+
T Consensus 110 ~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 189 (330)
T 4e5n_A 110 GLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGL 189 (330)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTE
T ss_pred HHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCc
Confidence 47999999999999999999997432223467999999999999999999999999999999999998755666666777
Q ss_pred eecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCC--
Q 027577 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQ-- 158 (221)
Q Consensus 81 ~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~e-- 158 (221)
... ++++++++||+|++|+|++++|+++++++.++.||+|++|||++||+++|+++|+++|++|+|.||++|||++|
T Consensus 190 ~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~E~~ 268 (330)
T 4e5n_A 190 RQV-ACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDW 268 (330)
T ss_dssp EEC-CHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCGGGCT
T ss_pred eeC-CHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCccEEEecccccccc
Confidence 665 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -----CCCCCCCCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCCCCccccccCC
Q 027577 159 -----PAPKDHPWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDFPVQNYIVKAG 214 (221)
Q Consensus 159 -----p~~~~~~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~~~~n~v~~~~ 214 (221)
|++.++|||++||+++|||+||+|.| .++...+.+|+.+|++|+++ .|.|+.+.
T Consensus 269 ~~~~~Pl~~~~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~g~~~--~~~vn~~~ 329 (330)
T 4e5n_A 269 ARADRPQQIDPALLAHPNTLFTPHIGSAVRAVRLEIERCAAQNILQALAGERP--INAVNRLP 329 (330)
T ss_dssp TCTTCCSSCCHHHHTCSSEEECSSCTTCCHHHHHHHHHHHHHHHHHHHTTSCC--TTBSSCCC
T ss_pred cccCCCCCCCchHHcCCCEEECCcCCCChHHHHHHHHHHHHHHHHHHHcCCCC--CCccCCCC
Confidence 99999999999999999999999998 77778899999999999874 55565543
No 9
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=5e-52 Score=361.01 Aligned_cols=212 Identities=21% Similarity=0.311 Sum_probs=184.5
Q ss_pred CcHHHHHhCchHH-HHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcC
Q 027577 1 MRILILVRNFLPG-HHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG 79 (221)
Q Consensus 1 ~~~l~~~R~~~~~-~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g 79 (221)
++||++.|++..+ ++.+++|.|.... .+.+|.|+||||||+|.||+.+|+++++||++|++||+++...+.+..
T Consensus 104 ~~~L~~~R~~~~~~~~~~~~~~W~~~~---~~~~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~-- 178 (324)
T 3evt_A 104 AAMLSVVRGYHAAWLNQRGARQWALPM---TTSTLTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFHE-- 178 (324)
T ss_dssp HHHHHHHTTHHHHHHHHTTTCCSSCSS---CCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCSE--
T ss_pred HHHHHHHhChhHHHHHHHhcCCcccCC---CCccccCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhHhh--
Confidence 4799999999999 9999999998642 467999999999999999999999999999999999997654332211
Q ss_pred ceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCC
Q 027577 80 AKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQP 159 (221)
Q Consensus 80 ~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep 159 (221)
.....++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||++|||++||
T Consensus 179 ~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EP 258 (324)
T 3evt_A 179 TVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEP 258 (324)
T ss_dssp EEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSS
T ss_pred ccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCC
Confidence 12345899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCCCCccccccCCccCC
Q 027577 160 APKDHPWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAP 218 (221)
Q Consensus 160 ~~~~~~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~~~~n~v~~~~~~~~ 218 (221)
+|.++|||++||+++|||+||+|.+ .++...+.+|+.+|++|++. +.|.|+.+.++-|
T Consensus 259 l~~~~pL~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~l~~~~~-~~n~V~~~~~~~~ 318 (324)
T 3evt_A 259 LPTDHPLWQRDDVLITPHISGQIAHFRATVFPIFAANFAQFVKDGTL-VRNQVDLNRGYEG 318 (324)
T ss_dssp CCTTCGGGGCSSEEECCSCTTCCCCHHHHHHHHHHHHHHHHHHHSCC-CSCBCC-------
T ss_pred CCCCChhhcCCCEEEcCccccChHHHHHHHHHHHHHHHHHHHhCCCC-CCceECcccccCC
Confidence 9999999999999999999999987 77778899999999976643 5788888877655
No 10
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=100.00 E-value=2.5e-51 Score=360.26 Aligned_cols=210 Identities=22% Similarity=0.335 Sum_probs=190.1
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcc--------cCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCCh
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGV--------AYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDP 72 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~--------~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~ 72 (221)
++||++.|++..+++.+++|.|..... ...+.+|.|+||||||+|.||+++|++++++|++|++||++. ..
T Consensus 117 ~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~ 195 (352)
T 3gg9_A 117 ALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGREN-SK 195 (352)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHH-HH
T ss_pred HHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCC-CH
Confidence 479999999999999999999986320 124679999999999999999999999999999999999864 33
Q ss_pred hHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEe
Q 027577 73 QLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSG 152 (221)
Q Consensus 73 ~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~l 152 (221)
+.+...|+..+.++++++++||+|++|+|++++|+++++.+.++.||+|++|||+|||+++|+++|+++|++|+|.||++
T Consensus 196 ~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~l 275 (352)
T 3gg9_A 196 ERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAI 275 (352)
T ss_dssp HHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEE
T ss_pred HHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEe
Confidence 44556788877799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCCCCCCCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCCCCccccc
Q 027577 153 DVWNPQPAPKDHPWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDFPVQNYIV 211 (221)
Q Consensus 153 DV~~~ep~~~~~~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~~~~n~v~ 211 (221)
|||++||++.++|||++||+++|||+|++|.+ .++...+.+|+.+|++|+|++.+|.-.
T Consensus 276 DV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~G~p~~~Vn~~~ 336 (352)
T 3gg9_A 276 DVFETEPILQGHTLLRMENCICTPHIGYVERESYEMYFGIAFQNILDILQGNVDSVANPTA 336 (352)
T ss_dssp CCCSSSCCCSCCGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCTTBSCGGG
T ss_pred cccCCCCCCCCChhhcCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCcccCHHH
Confidence 99999999999999999999999999999999 677788999999999998766555433
No 11
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=100.00 E-value=1.6e-50 Score=359.11 Aligned_cols=218 Identities=48% Similarity=0.857 Sum_probs=193.9
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (221)
++||++.|++..+++.+++|.|........+.+|.|+||||||+|.||+.+|+++++||++|++||++....+.+...|+
T Consensus 156 ~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~ 235 (393)
T 2nac_A 156 MMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNL 235 (393)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTC
T ss_pred HHHHHHHhccHHHHHHHHcCCCCccccccCCccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCc
Confidence 47999999999999999999997422112356899999999999999999999999999999999997666666666788
Q ss_pred eecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCC
Q 027577 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (221)
Q Consensus 81 ~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~ 160 (221)
....++++++++||+|++|+|++++|+++++++.++.||+|++|||++||+++|+++|.++|++|+|.||++|||++||+
T Consensus 236 ~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~~EP~ 315 (393)
T 2nac_A 236 TWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPA 315 (393)
T ss_dssp EECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCSSSSC
T ss_pred eecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCeeEEEEEecCCCCC
Confidence 76668999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCCCCccccccCCccCC
Q 027577 161 PKDHPWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAP 218 (221)
Q Consensus 161 ~~~~~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~~~~n~v~~~~~~~~ 218 (221)
+.++|||++||+++|||+|++|.+ .++...+.+|+++|++|+++.....|+..+.++|
T Consensus 316 ~~~~pL~~~~nvilTPHia~~T~e~~~~~~~~~~~nl~~~~~G~~~~~~~~~v~~~~~~~ 375 (393)
T 2nac_A 316 PKDHPWRTMPYNGMTPHISGTTLTAQARYAAGTREILECFFEGRPIRDEYLIVQGGALAG 375 (393)
T ss_dssp CTTCGGGTSTTBCCCCSCTTCSHHHHHHHHHHHHHHHHHHHHTCCCCGGGEEEETTEEC-
T ss_pred CCCChhHcCCCEEECCCCCcCcHHHHHHHHHHHHHHHHHHHcCCCCcceeEeccCCcccc
Confidence 999999999999999999999998 6677789999999999998733333445666665
No 12
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=100.00 E-value=2.2e-51 Score=358.47 Aligned_cols=208 Identities=28% Similarity=0.373 Sum_probs=187.3
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (221)
++||++.|++..+++.+++|.|.+.. ...+.+|.|+||||||+|.||+++|+++++||++|++||++.... ..+.++
T Consensus 107 ~l~L~~~R~~~~~~~~~~~g~w~~~~-~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~g~ 183 (334)
T 2pi1_A 107 AMILTLVKRLKRIEDRVKKLNFSQDS-EILARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKRED--LKEKGC 183 (334)
T ss_dssp HHHHHHHTTHHHHHHHHTTTCCCCCG-GGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHHTTC
T ss_pred HHHHHHHHhHHHHHHHHHcCCCcccc-CccceeccCceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchh--hHhcCc
Confidence 47999999999999999999998651 124679999999999999999999999999999999999976432 224577
Q ss_pred eecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCC
Q 027577 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (221)
Q Consensus 81 ~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~ 160 (221)
... ++++++++||+|++|+|++++|+++++++.++.||+|++|||+|||+++|+++|+++|++|+|.||++|||++||+
T Consensus 184 ~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~ 262 (334)
T 2pi1_A 184 VYT-SLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEI 262 (334)
T ss_dssp EEC-CHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHH
T ss_pred eec-CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEeecCCCCCC
Confidence 665 6999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred ---------------CCCCCCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCCCCccccccCC
Q 027577 161 ---------------PKDHPWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDFPVQNYIVKAG 214 (221)
Q Consensus 161 ---------------~~~~~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~~~~n~v~~~~ 214 (221)
+.+||||++||+++|||+|++|.+ .++...+.+|+.+|++|+++ .|.|+...
T Consensus 263 ~~~~~~~~~~~~~~~~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~g~~~--~~~Vn~~~ 331 (334)
T 2pi1_A 263 LILKKYTEGKATDKNLKILELACKDNVIITPHIAYYTDKSLERIREETVKVVKAFVKGDLE--QIKGNFVV 331 (334)
T ss_dssp HHTTGGGGTCCCHHHHHHHHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCGG--GGGGGEEE
T ss_pred ccccccccccccccCccCChhhcCCCEEECCccccChHHHHHHHHHHHHHHHHHHHcCCCC--CceECccc
Confidence 578999999999999999999999 67788899999999999974 56666543
No 13
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=6.4e-50 Score=356.70 Aligned_cols=211 Identities=27% Similarity=0.439 Sum_probs=182.7
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (221)
++||++.|++..+++.+++|.|.+.. ..+.+|.||||||||+|.||+.+|+++++|||+|++||+++.... .+.
T Consensus 123 ~l~L~l~R~i~~~~~~~~~g~W~~~~--~~~~el~gktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~~----~~~ 196 (416)
T 3k5p_A 123 GEIIMLMRRIFPRSVSAHAGGWEKTA--IGSREVRGKTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQY----GNV 196 (416)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCCCC--TTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCCB----TTB
T ss_pred HHHHHHhcccHHHHHhhhcccccccC--CCCccCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhcc----cCc
Confidence 47999999999999999999998653 346799999999999999999999999999999999998653221 134
Q ss_pred eecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCC
Q 027577 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (221)
Q Consensus 81 ~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~ 160 (221)
....++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|++.||++|||++||+
T Consensus 197 ~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~EP~ 276 (416)
T 3k5p_A 197 KPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPA 276 (416)
T ss_dssp EECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSCCS
T ss_pred EecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCCCCCCC
Confidence 55679999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC----CCCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcC-CCCCCccccccCCccC
Q 027577 161 PKD----HPWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKG-EDFPVQNYIVKAGELA 217 (221)
Q Consensus 161 ~~~----~~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g-~~~~~~n~v~~~~~~~ 217 (221)
+.+ +|||++||+++|||+||+|.| .++...+.+|+.+|+++ .+.+.+|.+...-...
T Consensus 277 ~~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~nl~~~l~~g~~~~~Vn~p~~~~~~~ 340 (416)
T 3k5p_A 277 SNGERFSTPLQGLENVILTPHIGGSTEEAQERIGTEVTRKLVEYSDVGSTVGAVNFPQVQLPPR 340 (416)
T ss_dssp STTSCCCCTTTTCTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHHHHCCCTTBSSSCCCCCCCC
T ss_pred CcccccchhHhcCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCceeeCCCcCCCCC
Confidence 765 799999999999999999999 77788899999999955 4557778776554443
No 14
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.4e-50 Score=352.21 Aligned_cols=198 Identities=25% Similarity=0.409 Sum_probs=154.2
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (221)
++||+++|++..+++.+++|.|........+.+|.||||||||+|.||+++|++++++|++|++||+++.. ..+.
T Consensus 136 ~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~-----~~~~ 210 (340)
T 4dgs_A 136 ALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLS-----GVDW 210 (340)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCT-----TSCC
T ss_pred HHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCccc-----ccCc
Confidence 47999999999999999999998641112367999999999999999999999999999999999997643 2245
Q ss_pred eecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCC
Q 027577 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (221)
Q Consensus 81 ~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~ 160 (221)
....++++++++||+|++|+|++++|+++++++.++.||++++|||++||+++|+++|+++|++|+|.||+||||++||+
T Consensus 211 ~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP~ 290 (340)
T 4dgs_A 211 IAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNEPA 290 (340)
T ss_dssp EECSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESCCSSSSS
T ss_pred eecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcCCCCC
Confidence 55679999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCC
Q 027577 161 PKDHPWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDF 204 (221)
Q Consensus 161 ~~~~~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~ 204 (221)
+. +|||++|||++|||+|++|.| .++...+.+|+.+|++|+++
T Consensus 291 ~~-~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~nl~~~~~g~~~ 335 (340)
T 4dgs_A 291 IR-SEFHTTPNTVLMPHQGSATVETRMAMGKLVLANLAAHFAGEKA 335 (340)
T ss_dssp CC-SHHHHSSSEEECSSCSSCCHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred Cc-cchhhCCCEEEcCcCCcCCHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 75 599999999999999999999 67778899999999999985
No 15
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=100.00 E-value=1e-49 Score=348.61 Aligned_cols=205 Identities=23% Similarity=0.299 Sum_probs=181.0
Q ss_pred CcHHHHHhCchHHHHHHH-cCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcC
Q 027577 1 MRILILVRNFLPGHHQVI-SGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG 79 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~-~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g 79 (221)
++||++.|++..+++.++ +|.|.+.. ...+.+|.|+||||||+|.||+.+|+++++||++|++||++... . ...+
T Consensus 113 ~l~L~~~R~~~~~~~~~~~~g~~~w~~-~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~--~~~~ 188 (343)
T 2yq5_A 113 TQAMYLLRKIGEFRYRMDHDHDFTWPS-NLISNEIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNP-E--FEPF 188 (343)
T ss_dssp HHHHHHHHTHHHHHHHHHHHCCCCCCG-GGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCG-G--GTTT
T ss_pred HHHHHHHhchHHHHHHHHHcCCccccc-CCCccccCCCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhh-h--hhcc
Confidence 479999999999999999 99876532 24578999999999999999999999999999999999997643 1 1223
Q ss_pred ceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCC
Q 027577 80 AKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQP 159 (221)
Q Consensus 80 ~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep 159 (221)
+... ++++++++||+|++|+|++++|+++++.+.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||
T Consensus 189 ~~~~-~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP 267 (343)
T 2yq5_A 189 LTYT-DFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDTLAGES 267 (343)
T ss_dssp CEEC-CHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCCTTGG
T ss_pred cccc-CHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecccccCC
Confidence 4444 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred --CCCC-----------CCCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCCCCcccccc
Q 027577 160 --APKD-----------HPWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDFPVQNYIVK 212 (221)
Q Consensus 160 --~~~~-----------~~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~~~~n~v~~ 212 (221)
++.+ +|||++|||++|||+|++|.| .++...+.+|+.+|++|+++ .|.|+.
T Consensus 268 ~~~~~~~~~~~~l~~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~ni~~~l~g~~~--~~~v~~ 333 (343)
T 2yq5_A 268 SYFGHTGLTDSEIPEDYKTLAKMPNVVITPHSAFYTETSIRNMVQICLTDQLTIAKGGRP--RSIVNL 333 (343)
T ss_dssp GTTTCCSCCTTTSCHHHHHHTTCTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHHTTCCC--TTBC--
T ss_pred CccccccccccccccchhHHhcCCCEEECCccccchHHHHHHHHHHHHHHHHHHHcCCCC--CceECC
Confidence 4555 489999999999999999999 67788899999999999985 455543
No 16
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=100.00 E-value=5.1e-49 Score=351.24 Aligned_cols=204 Identities=26% Similarity=0.411 Sum_probs=173.5
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (221)
++||+++|+++.+++.+++|.|.+.. ..+.+|.|||+||||+|+||+.+|+++++|||+|++||++.... ..++
T Consensus 112 ~~~L~~~R~i~~~~~~~~~g~W~~~~--~~~~el~gktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----~~~~ 185 (404)
T 1sc6_A 112 GELLLLLRGVPEANAKAHRGVGNKLA--AGSFEARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP----LGNA 185 (404)
T ss_dssp HHHHHHHHTHHHHHHHHHHTCCC-------CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC----CTTC
T ss_pred HHHHHHHhChHHHHHHHHcCCccccC--CCccccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhc----cCCc
Confidence 47999999999999999999997543 34679999999999999999999999999999999999865322 1135
Q ss_pred eecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCC
Q 027577 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (221)
Q Consensus 81 ~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~ 160 (221)
....++++++++||+|++|+|++++|+++++++.|+.||+|+++||+|||+++|+++|.++|++|++.||++|||+.||+
T Consensus 186 ~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gA~lDVf~~EP~ 265 (404)
T 1sc6_A 186 TQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAIDVFPTEPA 265 (404)
T ss_dssp EECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEEEEEEEC------
T ss_pred eecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCccEEEEeecCCCCC
Confidence 56678999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CC----CCCCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCC-CCcccc
Q 027577 161 PK----DHPWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDF-PVQNYI 210 (221)
Q Consensus 161 ~~----~~~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~-~~~n~v 210 (221)
+. ++|||++||+++|||+|++|.| .++...+.+|+.+|++|+++ +.+|.+
T Consensus 266 ~~~~~~~~pL~~~~nvilTPHi~~~T~ea~~~~~~~~~~nl~~~l~g~~~~~~vn~p 322 (404)
T 1sc6_A 266 TNSDPFTSPLAEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSAVNFP 322 (404)
T ss_dssp ---CTTTGGGTTCTTEEEECCCSCCSHHHHHHHHHHHHHHHHHHHHHCCCTTBSSSC
T ss_pred CccccccchhhcCCCEEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCcceeccc
Confidence 74 5799999999999999999999 66777899999999998754 555544
No 17
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=3.1e-48 Score=334.65 Aligned_cols=207 Identities=20% Similarity=0.299 Sum_probs=184.6
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (221)
++||++.|++..+++.+++|.|.... ...+|.|+||||||+|.||+.+|++++++|++|++||++.. .. +.
T Consensus 92 ~~~L~~~R~~~~~~~~~~~g~w~~~~---~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~-~~-----~~ 162 (303)
T 1qp8_A 92 ALLLAPYKRIIQYGEKMKRGDYGRDV---EIPLIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK-EG-----PW 162 (303)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCCCS---CCCCCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC-CS-----SS
T ss_pred HHHHHHHhCHHHHHHHHHcCCCCCCC---CCCCCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc-cc-----Cc
Confidence 47999999999999999999996431 23489999999999999999999999999999999998764 21 33
Q ss_pred eecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCC-CCCC
Q 027577 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVW-NPQP 159 (221)
Q Consensus 81 ~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~-~~ep 159 (221)
....++++++++||+|++|+|++++|+++++++.++.||+|+++||+|||+++|+++|.++|++|++.||++||| ++||
T Consensus 163 ~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep 242 (303)
T 1qp8_A 163 RFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRND 242 (303)
T ss_dssp CCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTC
T ss_pred ccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccCCCCCC
Confidence 345689999999999999999999999999999999999999999999999999999999999999999999999 8899
Q ss_pred CCCCCCCCCCCCeEECCCCCcC--CHH--HHHHHHHHHHHHHHHcCCCCCCccccccCCccCCC
Q 027577 160 APKDHPWRYMPNQAMTPHVSGT--TID--LRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAPQ 219 (221)
Q Consensus 160 ~~~~~~l~~~~n~~~tPH~a~~--t~~--~~~~~~~~~~~~~~~~g~~~~~~n~v~~~~~~~~~ 219 (221)
++.++|||++||+++|||+||+ |.+ .++...+.+|+.+|++|++ +.|.|+.+ +|.++
T Consensus 243 ~~~~~~L~~~~nviltPH~~~~~~t~e~~~~~~~~~~~nl~~~~~g~~--~~~~v~~~-~y~~~ 303 (303)
T 1qp8_A 243 FAKDAEFFSLPNVVATPWVAGGYGNERVWRQMVMEAVRNLITYATGGR--PRNIAKRE-DYIGS 303 (303)
T ss_dssp CGGGHHHHTSTTEEECCSCSSSSSCHHHHHHHHHHHHHHHHHHHTTSC--CSCBCCGG-GTC--
T ss_pred CCCCChhhcCCCEEECCCcCCCCCCHHHHHHHHHHHHHHHHHHHcCCC--CCceeCHH-HcCCC
Confidence 9989999999999999999998 888 6677889999999999986 46777765 67764
No 18
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=100.00 E-value=2.2e-48 Score=339.62 Aligned_cols=204 Identities=24% Similarity=0.352 Sum_probs=181.0
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (221)
++||++.|++..+++.+++|.|.+.. ..+.++.|+||||||+|.||+.+|++++++|++|++||++.... +.. .+
T Consensus 113 ~l~L~~~R~~~~~~~~~~~g~w~~~~--~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~-~~ 187 (333)
T 1j4a_A 113 IQAARILRQDKAMDEKVARHDLRWAP--TIGREVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--LEK-KG 187 (333)
T ss_dssp HHHHHHHHTHHHHHHHHHTTBCCCTT--CCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHH-TT
T ss_pred HHHHHHHcCHHHHHHHHHcCCCccCC--cccccCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--HHh-hC
Confidence 47999999999999999999997532 34678999999999999999999999999999999999976432 233 24
Q ss_pred eecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCC-
Q 027577 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQP- 159 (221)
Q Consensus 81 ~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep- 159 (221)
....++++++++||+|++|+|++++|+++++++.++.||+|+++||++||+++|+++|+++|++|+|.||+||||++||
T Consensus 188 ~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~ 267 (333)
T 1j4a_A 188 YYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVG 267 (333)
T ss_dssp CBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTCTT
T ss_pred eecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEecCCCCCC
Confidence 4445899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCCCC-----------CCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCCCCccccc
Q 027577 160 -APKDH-----------PWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDFPVQNYIV 211 (221)
Q Consensus 160 -~~~~~-----------~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~~~~n~v~ 211 (221)
+|.+| |||++|||++|||+|++|.+ .++...+.+|+.+|++|+++ .|.|+
T Consensus 268 ~l~~~~~~~~~~~p~~~~L~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~~~g~~~--~~~v~ 331 (333)
T 1j4a_A 268 IFNEDWEGKEFPDARLADLIARPNVLVTPKTAFYTTHAVRNMVVKAFDNNLELVEGKEA--ETPVK 331 (333)
T ss_dssp TTTSBCTTSCCSCHHHHHHHHCTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHHTTCCC--SSBCC
T ss_pred ccccccccccCCccchhhHHhCCCEEECCccccCHHHHHHHHHHHHHHHHHHHHcCCCC--Ccccc
Confidence 45544 59999999999999999999 67788899999999999874 45554
No 19
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=2.2e-48 Score=339.71 Aligned_cols=206 Identities=22% Similarity=0.377 Sum_probs=180.5
Q ss_pred CcHHHHHhCchHHHHHHHcCCCcc-CcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcC
Q 027577 1 MRILILVRNFLPGHHQVISGEWNV-AGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG 79 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~-~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g 79 (221)
++||++.|++..+++.+++|.|.+ .. ..+.+|.|+||||||+|.||+.+|++++++|++|++||++.... +.. .
T Consensus 111 ~l~L~~~R~~~~~~~~~~~g~w~~~~~--~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~-~ 185 (333)
T 1dxy_A 111 TDTLYLLRNMGKVQAQLQAGDYEKAGT--FIGKELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--DHP-D 185 (333)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCHHHHTC--CCCCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--CCT-T
T ss_pred HHHHHHhhhHHHHHHHHHcCCcccccC--CCccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--hHh-c
Confidence 479999999999999999999964 22 24678999999999999999999999999999999999876432 122 2
Q ss_pred ceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCC
Q 027577 80 AKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQP 159 (221)
Q Consensus 80 ~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep 159 (221)
+.. .++++++++||+|++|+|++++|+++++++.++.||+|+++||+|||+++|+++|+++|++|+|.||+||||++||
T Consensus 186 ~~~-~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP 264 (333)
T 1dxy_A 186 FDY-VSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYET 264 (333)
T ss_dssp CEE-CCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCTTHH
T ss_pred ccc-CCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCCCCC
Confidence 443 4899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred C--C--------CC---CCCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCCCCccccccCC
Q 027577 160 A--P--------KD---HPWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDFPVQNYIVKAG 214 (221)
Q Consensus 160 ~--~--------~~---~~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~~~~n~v~~~~ 214 (221)
+ + .+ +|||++||+++|||+|++|.+ .++...+.+|+.+|++|+++ .|.|+.+.
T Consensus 265 ~~~~~~~~~~~~~~~~~~pL~~~~nvi~TPHia~~t~e~~~~~~~~~~~nl~~~~~g~~~--~~~v~~~~ 332 (333)
T 1dxy_A 265 EDLLNLAKHGSFKDPLWDELLGMPNVVLSPHIAYYTETAVHNMVYFSLQHLVDFLTKGET--STEVTGPA 332 (333)
T ss_dssp HHHHHHHHHSSCCCHHHHHHHTCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHHHSCC--TTEECC--
T ss_pred CcccccccccccCccchhHHhcCCCEEECCccccChHHHHHHHHHHHHHHHHHHHcCCCC--CceeCCCC
Confidence 3 1 12 589999999999999999999 67788899999999999874 56676654
No 20
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=100.00 E-value=2.2e-47 Score=327.14 Aligned_cols=191 Identities=25% Similarity=0.401 Sum_probs=174.2
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (221)
++||++.|++..+++.+++|.|.... ..+|.|+||||||+|.||+++|++++++|++|++||+++...+. +
T Consensus 91 ~~~L~~~R~~~~~~~~~~~g~w~~~~----~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----~ 161 (290)
T 3gvx_A 91 ALLLAHAKNILENNELMKAGIFRQSP----TTLLYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV-----D 161 (290)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCCCC----CCCCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC-----S
T ss_pred HHHHHHHHhhhhhhhHhhhcccccCC----ceeeecchheeeccCchhHHHHHHHHhhCcEEEEEecccccccc-----c
Confidence 47999999999999999999998642 36899999999999999999999999999999999997644322 4
Q ss_pred eecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCC
Q 027577 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (221)
Q Consensus 81 ~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~ 160 (221)
....++++++++||+|++|+|++++|+++++++.++.||+|++|||+|||+++|+++|+++|++|++.+|++|||++||+
T Consensus 162 ~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP~ 241 (290)
T 3gvx_A 162 VISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEPE 241 (290)
T ss_dssp EECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTS
T ss_pred cccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCcc
Confidence 45669999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCCCCCCCCCeEECCCCC-cCCHH--HHHHHHHHHHHHHHHcCCC
Q 027577 161 PKDHPWRYMPNQAMTPHVS-GTTID--LRYAAGVKDMLDRYFKGED 203 (221)
Q Consensus 161 ~~~~~l~~~~n~~~tPH~a-~~t~~--~~~~~~~~~~~~~~~~g~~ 203 (221)
+|||++||+++|||+| ++|.+ .++...+.+|+.+|++|+-
T Consensus 242 ---~pL~~~~nvilTPHiag~~t~e~~~~~~~~~~~ni~~~~~~~~ 284 (290)
T 3gvx_A 242 ---ITETNLRNAILSPHVAGGMSGEIMDIAIQLAFENVRNFFEGEG 284 (290)
T ss_dssp ---CCSCCCSSEEECCSCSSCBTTBCCHHHHHHHHHHHHHHTC---
T ss_pred ---cchhhhhhhhcCccccCCccchHHHHHHHHHHHHHHhhhcCCC
Confidence 8999999999999999 88888 7888889999999999874
No 21
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-47 Score=332.98 Aligned_cols=199 Identities=30% Similarity=0.514 Sum_probs=178.1
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (221)
++||++.|++..+++.+++|.|.... ..+.+|.|+||||||+|.||+.+|++++++|++|++||++... +.+...|+
T Consensus 132 ~l~L~~~R~~~~~~~~~~~g~W~~~~--~~~~~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~ 208 (335)
T 2g76_A 132 GMIMCLARQIPQATASMKDGKWERKK--FMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISP-EVSASFGV 208 (335)
T ss_dssp HHHHHHHHTHHHHHHHHHTTCCCTGG--GCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCH-HHHHHTTC
T ss_pred HHHHHHHhchHHHHHHHHcCCCCccC--CCCcCCCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCc
Confidence 47999999999999999999997532 2367899999999999999999999999999999999987543 44556677
Q ss_pred eecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCC
Q 027577 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (221)
Q Consensus 81 ~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~ 160 (221)
.. .++++++++||+|++|+|++++|+++++++.++.||+|++|||+|||+++|+++|.++|++|++.||++|||+.||
T Consensus 209 ~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~gA~lDV~~~EP- 286 (335)
T 2g76_A 209 QQ-LPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP- 286 (335)
T ss_dssp EE-CCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSS-
T ss_pred ee-CCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCccEEEEeecCCCC-
Confidence 65 4899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCC
Q 027577 161 PKDHPWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDF 204 (221)
Q Consensus 161 ~~~~~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~ 204 (221)
+.++|||++||+++|||+|++|.+ .++...+.+|+.+|++|+++
T Consensus 287 ~~~~~L~~~~nvilTPH~~~~t~e~~~~~~~~~~~nl~~~~~g~~~ 332 (335)
T 2g76_A 287 PRDRALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGKSL 332 (335)
T ss_dssp CSCCHHHHSTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHC-----
T ss_pred CCCchHHhCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 667999999999999999999999 67778899999999999875
No 22
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=100.00 E-value=1.1e-46 Score=330.39 Aligned_cols=211 Identities=27% Similarity=0.394 Sum_probs=187.0
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcc-----cCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHH
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGV-----AYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLE 75 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~-----~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 75 (221)
++||++.|++..+++.+++|.|..... .....+|.|+||||||+|.||+.+|++++++|++|++||++... ...
T Consensus 128 ~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~ 206 (347)
T 1mx3_A 128 CHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSD-GVE 206 (347)
T ss_dssp HHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCT-THH
T ss_pred HHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-hhH
Confidence 479999999999999999999953210 01136899999999999999999999999999999999987543 334
Q ss_pred HhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCC
Q 027577 76 KETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVW 155 (221)
Q Consensus 76 ~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~ 155 (221)
...|+..+.++++++++||+|++|+|++++|+++++++.++.||+|++|||++||+++|+++|.++|++|+|.||++|||
T Consensus 207 ~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~ 286 (347)
T 1mx3_A 207 RALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVH 286 (347)
T ss_dssp HHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCC
T ss_pred hhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCcEEEEeec
Confidence 55677766789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC-CCCCCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCC-CCcccccc
Q 027577 156 NPQPAP-KDHPWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDF-PVQNYIVK 212 (221)
Q Consensus 156 ~~ep~~-~~~~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~-~~~n~v~~ 212 (221)
+.||++ .++|||.+||+++|||+|++|.+ .++...+.+|+.+|++|+++ ++.|.|++
T Consensus 287 ~~EP~~~~~~~L~~~~nvi~tPHia~~t~~~~~~~~~~~~~ni~~~~~g~~~~~l~~~v~~ 347 (347)
T 1mx3_A 287 ESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMREEAAREIRRAITGRIPDSLKNCVNK 347 (347)
T ss_dssp SSSSCCTTSSTTTTCSSEEECSSCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTCSSBCC-
T ss_pred ccCCCCCCCchHHhCCCEEEEchHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccCCCCCC
Confidence 999987 47899999999999999999999 67778899999999999876 46677753
No 23
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=7.9e-47 Score=326.51 Aligned_cols=197 Identities=32% Similarity=0.569 Sum_probs=181.3
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (221)
++||++.|++..+++.+++|.|.... ..+.+|.|+||||||+|.||+.+|++++++|++|++||++... +.+.+.|+
T Consensus 109 ~~~L~~~R~~~~~~~~~~~g~w~~~~--~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~ 185 (307)
T 1wwk_A 109 GLMFSVARKIAFADRKMREGVWAKKE--AMGIELEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVNG 185 (307)
T ss_dssp HHHHHHHTTHHHHHHHHTTTCCCTTT--CCBCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTC
T ss_pred HHHHHHHhCHHHHHHHHHcCCCCccC--cCCcccCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCc
Confidence 47999999999999999999997422 2357899999999999999999999999999999999997644 45556777
Q ss_pred eecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCC
Q 027577 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (221)
Q Consensus 81 ~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~ 160 (221)
... ++++++++||+|++|+|++++|+++++++.++.||+|+++||++||+++|+++|.++|++|+|.||++|||+.||+
T Consensus 186 ~~~-~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~ 264 (307)
T 1wwk_A 186 KFV-DLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPL 264 (307)
T ss_dssp EEC-CHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSC
T ss_pred ccc-CHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCCCCCC
Confidence 664 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcC
Q 027577 161 PKDHPWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKG 201 (221)
Q Consensus 161 ~~~~~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g 201 (221)
+.++|||++||+++|||++++|.+ .++...+.+|+.+|++|
T Consensus 265 ~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~~nl~~~~~g 307 (307)
T 1wwk_A 265 PKDHPLTKFDNVVLTPHIGASTVEAQERAGVEVAEKVVKILKG 307 (307)
T ss_dssp CTTCGGGGCTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCChHHhCCCEEECCccccCcHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999 67778899999999976
No 24
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=100.00 E-value=2.5e-47 Score=332.74 Aligned_cols=203 Identities=26% Similarity=0.415 Sum_probs=178.6
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (221)
++||++.|++..+++.+++|.|.+.. ...+.+|.|+||||||+|.||+.+|++++++|++|++||++.... +.. .+
T Consensus 112 ~l~L~~~R~~~~~~~~~~~g~w~~~~-~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~-~~ 187 (331)
T 1xdw_A 112 TQAMMLLRHTAYTTSRTAKKNFKVDA-FMFSKEVRNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--IED-YC 187 (331)
T ss_dssp HHHHHHHTTHHHHHHHHTTTCCCCCS-TTCCCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--CTT-TC
T ss_pred HHHHHHHhCHHHHHHHHHcCCCcccc-CcCccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH--HHh-cc
Confidence 47899999999999999999996411 134678999999999999999999999999999999999876433 122 24
Q ss_pred eecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCC
Q 027577 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (221)
Q Consensus 81 ~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~ 160 (221)
.. .++++++++||+|++|+|++++|+++++++.++.||+|+++||+|||+++|+++|.++|++|+|.||+||||++||+
T Consensus 188 ~~-~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~ 266 (331)
T 1xdw_A 188 TQ-VSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDVLDGEAS 266 (331)
T ss_dssp EE-CCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTGGG
T ss_pred cc-CCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEecCCCCCC
Confidence 43 48999999999999999999999999999999999999999999999999999999999999999999999999994
Q ss_pred --CCC-------C----CCCCC-CCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCCCCcccc
Q 027577 161 --PKD-------H----PWRYM-PNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDFPVQNYI 210 (221)
Q Consensus 161 --~~~-------~----~l~~~-~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~~~~n~v 210 (221)
+.+ + |||++ ||+++|||+|++|.+ .++...+.+|+.+|++|+++ .|.|
T Consensus 267 ~~~~~~~~~~~~~~~~~~L~~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~~~g~~~--~~~v 330 (331)
T 1xdw_A 267 VFGKDLEGQKLENPLFEKLVDLYPRVLITPHLGSYTDEAVKNMVEVSYQNLKDLAETGDC--PNKI 330 (331)
T ss_dssp TTTCCCTTSCCSSHHHHHHHHTTTTEEECCSCTTCSHHHHHHHHHHHHHHHHHHHHHSCC--TTBC
T ss_pred cccccccccccCccchHHHHhCCCCEEEcCccccChHHHHHHHHHHHHHHHHHHHcCCCC--CCCC
Confidence 332 3 79999 999999999999999 67788899999999999874 4544
No 25
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=3e-46 Score=324.57 Aligned_cols=201 Identities=26% Similarity=0.400 Sum_probs=182.2
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCc-ccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcC-CCCChhHHHhc
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAG-VAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDR-VKMDPQLEKET 78 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~-~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~-~~~~~~~~~~~ 78 (221)
++||++.|++..+++.+++|.|.... ....+.++.|+||||||+|.||+++|++++++|++|++||+ +... ..+.+.
T Consensus 110 ~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~~ 188 (320)
T 1gdh_A 110 LLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASS-SDEASY 188 (320)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHHHH
T ss_pred HHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhhhc
Confidence 47999999999999999999996321 12346789999999999999999999999999999999999 7643 445556
Q ss_pred CceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCC
Q 027577 79 GAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQ 158 (221)
Q Consensus 79 g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~e 158 (221)
|+....++++++++||+|++|+|++++|+++++++.++.||+|+++||++||+++|+++|.++|++|++.||++|||+.|
T Consensus 189 g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~~~e 268 (320)
T 1gdh_A 189 QATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGE 268 (320)
T ss_dssp TCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTT
T ss_pred CcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 77766689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCC
Q 027577 159 PAPKDHPWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDF 204 (221)
Q Consensus 159 p~~~~~~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~ 204 (221)
| +.++|||++||+++|||++++|.+ .++...+ +|+.+|++|+++
T Consensus 269 P-~~~~~L~~~~nviltPH~~~~t~~~~~~~~~~~-~nl~~~~~g~~~ 314 (320)
T 1gdh_A 269 P-NINEGYYDLPNTFLFPHIGSAATQAREDMAHQA-NDLIDALFGGAD 314 (320)
T ss_dssp T-SCCTTGGGCTTEEECSSCTTCBHHHHHHHHHHH-HHHHHHHHTTSC
T ss_pred C-CCCChhhhCCCEEECCcCCcCcHHHHHHHHHHH-HHHHHHHcCCCC
Confidence 9 889999999999999999999999 6777778 999999999875
No 26
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-45 Score=319.87 Aligned_cols=200 Identities=32% Similarity=0.544 Sum_probs=179.8
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCc-ccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcC
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAG-VAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG 79 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~-~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g 79 (221)
++||++.|++..+++.+++|.|.... ....+.++.|+||||||+|.||+.+|++++++|++|++||++.....
T Consensus 108 ~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~------ 181 (311)
T 2cuk_A 108 ALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP------ 181 (311)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS------
T ss_pred HHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc------
Confidence 47999999999999999999996321 11235789999999999999999999999999999999999764432
Q ss_pred ceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCC
Q 027577 80 AKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQP 159 (221)
Q Consensus 80 ~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep 159 (221)
+. ..++++++++||+|++|+|.+++|+++++++.++.||+|+++||++||+++|+++|.++|+ |++.||++|||+.||
T Consensus 182 ~~-~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i~ga~lDv~~~eP 259 (311)
T 2cuk_A 182 YP-FLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR-GHLFGAGLDVTDPEP 259 (311)
T ss_dssp SC-BCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTSSEEEESSCSSSS
T ss_pred cc-cCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHh-CcCCEEEEeeCCCCC
Confidence 22 4589999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred CCCCCCCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCCCCcccc
Q 027577 160 APKDHPWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDFPVQNYI 210 (221)
Q Consensus 160 ~~~~~~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~~~~n~v 210 (221)
++.++|||++||+++|||++++|.+ .++...+.+|+.+|++|+++ .|.|
T Consensus 260 ~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~~nl~~~~~g~~~--~~~v 310 (311)
T 2cuk_A 260 LPPGHPLYALPNAVITPHIGSAGRTTRERMAEVAVENLLAVLEGREP--PNPV 310 (311)
T ss_dssp CCTTSGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCC--SSBC
T ss_pred CCCCChhhhCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCC--CCcc
Confidence 9999999999999999999999999 67778899999999999864 4544
No 27
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=100.00 E-value=3.1e-46 Score=323.58 Aligned_cols=197 Identities=22% Similarity=0.339 Sum_probs=180.9
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (221)
++||++.|++..+++.+++|.|.. ..+.++.|+||||||+|.||+.+|++++++|++|++||+++.. ..+...|+
T Consensus 111 ~~~L~~~R~~~~~~~~~~~g~w~~----~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~ 185 (313)
T 2ekl_A 111 GLMIAAARKMYTSMALAKSGIFKK----IEGLELAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIR-EKAEKINA 185 (313)
T ss_dssp HHHHHHHHTHHHHHHHHHTTCCCC----CCCCCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTC
T ss_pred HHHHHHHhCHHHHHHHHHcCCCCC----CCCCCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcch-hHHHhcCc
Confidence 479999999999999999999962 2467899999999999999999999999999999999997643 34556677
Q ss_pred eecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCC
Q 027577 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (221)
Q Consensus 81 ~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~ 160 (221)
... ++++++++||+|++|+|++++|+++++++.++.||+|+++||++||+++|+++|.++|++|++.||++|||+.||+
T Consensus 186 ~~~-~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~ 264 (313)
T 2ekl_A 186 KAV-SLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDVFWNEPP 264 (313)
T ss_dssp EEC-CHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESCCSSSSC
T ss_pred eec-CHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEecCCCCCC
Confidence 754 8999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCC---CCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCC
Q 027577 161 PKDH---PWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDF 204 (221)
Q Consensus 161 ~~~~---~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~ 204 (221)
+ ++ |||++||+++|||++++|.+ .++...+.+|+.+|++|+++
T Consensus 265 ~-~~~~~~L~~~~nviltPH~~~~t~~~~~~~~~~~~~n~~~~~~g~~l 312 (313)
T 2ekl_A 265 K-EEWELELLKHERVIVTTHIGAQTKEAQKRVAEMTTQNLLNAMKELGM 312 (313)
T ss_dssp C-SHHHHHHHHSTTEEECCSCTTCSHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred C-CcccchHhhCCCEEECCccCcCcHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 7 66 99999999999999999999 67778899999999999874
No 28
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=100.00 E-value=2.9e-45 Score=319.76 Aligned_cols=201 Identities=25% Similarity=0.417 Sum_probs=181.0
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (221)
++||++.|++..+++.+++|.|..... ..+.+|.|+||||||+|.||+.+|+.++++|++|++||+++.... ++
T Consensus 130 ~l~L~~~R~~~~~~~~~~~g~w~~~~~-~~~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~-----g~ 203 (333)
T 3ba1_A 130 GLILAVLRRICECDKYVRRGAWKFGDF-KLTTKFSGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNT-----NY 203 (333)
T ss_dssp HHHHHHHTTHHHHHHHHHTTGGGGCCC-CCCCCCTTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTC-----CS
T ss_pred HHHHHHHhCHHHHHHHHHcCCCCcccc-ccccccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhcc-----Cc
Confidence 479999999999999999999974321 235789999999999999999999999999999999999764321 55
Q ss_pred eecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCC
Q 027577 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (221)
Q Consensus 81 ~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~ 160 (221)
....++++++++||+|++|+|.+++++++++++.++.||++++|||++||.++|+++|.++|++|++.+|++|||++||.
T Consensus 204 ~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~ 283 (333)
T 3ba1_A 204 TYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFEREPE 283 (333)
T ss_dssp EEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCTTTTC
T ss_pred eecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCCCCCC
Confidence 55678999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCCCCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCCCCcccc
Q 027577 161 PKDHPWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDFPVQNYI 210 (221)
Q Consensus 161 ~~~~~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~~~~n~v 210 (221)
+. +|||++||+++|||+|++|.+ .++...+.+|+.+|++|+++ .|.|
T Consensus 284 ~~-~~L~~~~nviltPH~~~~t~e~~~~~~~~~~~nl~~~~~g~~~--~~~V 332 (333)
T 3ba1_A 284 VP-EKLFGLENVVLLPHVGSGTVETRKVMADLVVGNLEAHFSGKPL--LTPV 332 (333)
T ss_dssp CC-GGGGGCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHHTCCC--SSBC
T ss_pred Cc-chhhcCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCC--CCCC
Confidence 76 899999999999999999999 67778899999999999875 4444
No 29
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=100.00 E-value=3.5e-44 Score=312.80 Aligned_cols=208 Identities=28% Similarity=0.433 Sum_probs=186.6
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccC-cccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcC
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG 79 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~-~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g 79 (221)
++||++.|++..+++.+++|.|... .....+.++.|+||||||+|.||+.+|+.++++|++|++||++....+.....+
T Consensus 119 ~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g 198 (330)
T 2gcg_A 119 SLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQ 198 (330)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTT
T ss_pred HHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcC
Confidence 4799999999999999999999642 112335789999999999999999999999999999999998765555555667
Q ss_pred ceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCC
Q 027577 80 AKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQP 159 (221)
Q Consensus 80 ~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep 159 (221)
+... ++++++++||+|++|+|.+++++++++++.++.||++++|||++||.++|+++|.++|++|++.|+++|||++||
T Consensus 199 ~~~~-~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~ep 277 (330)
T 2gcg_A 199 AEFV-STPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEP 277 (330)
T ss_dssp CEEC-CHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSS
T ss_pred ceeC-CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCCCCCCC
Confidence 7665 899999999999999999999999999899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCCCCccccc
Q 027577 160 APKDHPWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDFPVQNYIV 211 (221)
Q Consensus 160 ~~~~~~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~~~~n~v~ 211 (221)
++.++|||+++|+++|||+|+.|.+ .++...+.+|+.+|++|+++ .|.|+
T Consensus 278 l~~~~~l~~~~nvi~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~--~~~v~ 329 (330)
T 2gcg_A 278 LPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGEPM--PSELK 329 (330)
T ss_dssp CCTTCGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCCC--TTEEC
T ss_pred CCCCChhhcCCCEEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC--CCCCC
Confidence 9999999999999999999999988 67777899999999999874 45543
No 30
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=100.00 E-value=1.1e-44 Score=317.95 Aligned_cols=209 Identities=25% Similarity=0.345 Sum_probs=185.2
Q ss_pred CcHHHHHhCchHHHHHHHcCC---CccCc--ccCcccCCCCCEEEEEccCHHHHHHHHHHc-cCCCeEEEEcCCCCChhH
Q 027577 1 MRILILVRNFLPGHHQVISGE---WNVAG--VAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQL 74 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~---w~~~~--~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~-~~G~~V~~~d~~~~~~~~ 74 (221)
++||++.|++..+++.+++|. |.... ....+.+|.|+||||||+|.||+.+|+.++ ++|++|++||++....+.
T Consensus 123 ~l~L~~~R~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~ 202 (348)
T 2w2k_A 123 YLILSVFRLASYSERAARTGDPETFNRVHLEIGKSAHNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAET 202 (348)
T ss_dssp HHHHHHHHTHHHHHHHHTTCCHHHHHHHHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHH
T ss_pred HHHHHHHhChHHHHHHHHcCCCcccccccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhh
Confidence 479999999999999999999 94211 012356899999999999999999999999 999999999998766555
Q ss_pred HHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeC
Q 027577 75 EKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 154 (221)
Q Consensus 75 ~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV 154 (221)
+.+.|+....++++++++||+|++|+|.+++++++++++.++.||++++|||++||+++|+++|.++|++|++.||++||
T Consensus 203 ~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv 282 (348)
T 2w2k_A 203 EKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDV 282 (348)
T ss_dssp HHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESS
T ss_pred HhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEecc
Confidence 55567776668999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCCCCcccccc
Q 027577 155 WNPQPAPKDHPWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDFPVQNYIVK 212 (221)
Q Consensus 155 ~~~ep~~~~~~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~~~~n~v~~ 212 (221)
|++|| +.++||+.+||+++|||+|+.|.+ .++...+.+|+.+|++|+++ .|.|+.
T Consensus 283 ~~~EP-~~~~~L~~~~nviltPH~~~~t~e~~~~~~~~~~~ni~~~~~g~~~--~~~v~~ 339 (348)
T 2w2k_A 283 HEFEP-QVSKELIEMKHVTLTTHIGGVAIETFHEFERLTMTNIDRFLLQGKP--LLTPAG 339 (348)
T ss_dssp CTTTT-SCCHHHHTSSSEEECCSCTTCSHHHHHHHHHHHHHHHHHHHHTCCC--CSSBCS
T ss_pred CCCCC-CCCchhhcCCCEEEcCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCC--cceecc
Confidence 99999 667889999999999999999999 67777889999999999764 444443
No 31
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.8e-44 Score=313.72 Aligned_cols=206 Identities=31% Similarity=0.542 Sum_probs=182.7
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcc----cCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHH
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRA----YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK 76 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~----~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 76 (221)
++||++.|++..+++.+++|.|........+ .+|.|+||||||+|.||+.+|+.++++|++|++||++... +.+.
T Consensus 107 ~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~ 185 (333)
T 2d0i_A 107 GLIINLMRKIHYADKFIRRGEWESHAKIWTGFKRIESLYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEK 185 (333)
T ss_dssp HHHHHHHHCHHHHHHHHHTTCCCCHHHHHTTSCCCCCSTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHH
T ss_pred HHHHHHHhHHHHHHHHHHcCCCCcCcccccCCcccCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhh
Confidence 4799999999999999999999631100123 6899999999999999999999999999999999997653 4445
Q ss_pred hcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCC
Q 027577 77 ETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWN 156 (221)
Q Consensus 77 ~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~ 156 (221)
..|+... ++++++++||+|++|+|.+++++++++++.++.||++ ++||+|||.++|+++|.++|++|++.||++|||+
T Consensus 186 ~~g~~~~-~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~ 263 (333)
T 2d0i_A 186 ELKARYM-DIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFE 263 (333)
T ss_dssp HHTEEEC-CHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCS
T ss_pred hcCceec-CHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecCCC
Confidence 5677654 8999999999999999999999999998889999999 9999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCC-CeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCCCCcccccc
Q 027577 157 PQPAPKDHPWRYMP-NQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDFPVQNYIVK 212 (221)
Q Consensus 157 ~ep~~~~~~l~~~~-n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~~~~n~v~~ 212 (221)
+||++ ++|||++| |+++|||++++|.+ .++...+.+|+.+|++|+++ .|.|+.
T Consensus 264 ~EP~~-~~~L~~~~~nviltPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~--~~~v~~ 319 (333)
T 2d0i_A 264 KEPVR-EHELFKYEWETVLTPHYAGLALEAQEDVGFRAVENLLKVLRGEVP--EDLVNK 319 (333)
T ss_dssp SSSCS-CCGGGGCTTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHHTTCCC--TTBSCT
T ss_pred CCCCC-CchHHcCCCCEEEcCccCCCcHHHHHHHHHHHHHHHHHHHcCCCC--cCccCH
Confidence 99988 89999999 99999999999999 67778899999999999874 455553
No 32
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=100.00 E-value=6.4e-44 Score=311.59 Aligned_cols=206 Identities=33% Similarity=0.545 Sum_probs=183.5
Q ss_pred CcHHHHHhCchHHHHHHHcCCCc----c-CcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHH
Q 027577 1 MRILILVRNFLPGHHQVISGEWN----V-AGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLE 75 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~----~-~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 75 (221)
++||++.|++..+++.+++|.|. . ......+.+|.|+||||||+|.||+.+|+.++++|++|++||++... +.+
T Consensus 110 ~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~ 188 (334)
T 2dbq_A 110 ALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVE 188 (334)
T ss_dssp HHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHH
T ss_pred HHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhH
Confidence 47999999999999999999996 1 11112357899999999999999999999999999999999997654 444
Q ss_pred HhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCC
Q 027577 76 KETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVW 155 (221)
Q Consensus 76 ~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~ 155 (221)
...|+.. .++++++++||+|++|+|.+++++++++++.++.||++++|||+|||.++|+++|.++|++|++.||++|||
T Consensus 189 ~~~g~~~-~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~ 267 (334)
T 2dbq_A 189 RELNAEF-KPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVF 267 (334)
T ss_dssp HHHCCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCC
T ss_pred hhcCccc-CCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCC
Confidence 5567765 489999999999999999999999999988999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCCCCccccc
Q 027577 156 NPQPAPKDHPWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDFPVQNYIV 211 (221)
Q Consensus 156 ~~ep~~~~~~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~~~~n~v~ 211 (221)
++|| +.++|||.+||+++|||+|+.|.+ .++...+.+|+.+|++|+++ .|.|+
T Consensus 268 ~~EP-~~~~~L~~~~~vi~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~--~~~v~ 322 (334)
T 2dbq_A 268 EEEP-YYNEELFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRGEIP--PTLVN 322 (334)
T ss_dssp SSSS-CCCHHHHHCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHTTCCC--TTBSC
T ss_pred CCCC-CCCchhhcCCCEEECCccCCCcHHHHHHHHHHHHHHHHHHHcCCCC--ccccC
Confidence 9999 888999999999999999999999 67778899999999999875 45554
No 33
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=100.00 E-value=3.6e-41 Score=310.18 Aligned_cols=206 Identities=30% Similarity=0.510 Sum_probs=185.1
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc
Q 027577 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (221)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (221)
++||+++|+++++++.+++|.|.... +.+.+|.|+||||||+|.||+++|++++++|++|++||++. ..+.+.+.|+
T Consensus 109 ~~~l~~~R~~~~~~~~~~~g~w~~~~--~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~ 185 (529)
T 1ygy_A 109 ALLLAASRQIPAADASLREHTWKRSS--FSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYV-SPARAAQLGI 185 (529)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCGGG--CCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTS-CHHHHHHHTC
T ss_pred HHHHHHHhhhHHHHHHHHhCCCcccC--cCccccCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCC-ChhHHHhcCc
Confidence 47999999999999999999997542 34678999999999999999999999999999999999976 3455666788
Q ss_pred eecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCC
Q 027577 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (221)
Q Consensus 81 ~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~ 160 (221)
... ++++++++||+|++|+|.++++.++++++.++.||+|+++||++||.++|+++|.++|++|++.||++|||+.||.
T Consensus 186 ~~~-~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~ 264 (529)
T 1ygy_A 186 ELL-SLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPC 264 (529)
T ss_dssp EEC-CHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSC
T ss_pred EEc-CHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCC
Confidence 765 8999999999999999999999999999899999999999999999999999999999999999999999999995
Q ss_pred CCCCCCCCCCCeEECCCCCcCCHH--HHHHHHHHHHHHHHHcCCCCCCccccccC
Q 027577 161 PKDHPWRYMPNQAMTPHVSGTTID--LRYAAGVKDMLDRYFKGEDFPVQNYIVKA 213 (221)
Q Consensus 161 ~~~~~l~~~~n~~~tPH~a~~t~~--~~~~~~~~~~~~~~~~g~~~~~~n~v~~~ 213 (221)
.++|||+++|+++|||+++.|.+ .++...+.+++.+|+.|++. .|.++..
T Consensus 265 -~~~~L~~~~~vilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~~~--~~~v~~~ 316 (529)
T 1ygy_A 265 -TDSPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGEFV--PDAVNVG 316 (529)
T ss_dssp -SCCGGGGCTTEEECSSCSSCBHHHHHHHHHHHHHHHHHHHTTCCC--TTBCSCC
T ss_pred -CCchHHhCCCEEEccccCCCCHHHHHHHHHHHHHHHHHHHcCCCC--CcccCCc
Confidence 68999999999999999999988 66777889999999999864 3444443
No 34
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=100.00 E-value=4.1e-42 Score=303.39 Aligned_cols=165 Identities=24% Similarity=0.429 Sum_probs=148.0
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChh----hh
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEK----TR 107 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~----t~ 107 (221)
.+|.|+||||||+|+||+.+|++++++|++|++||+.. +. ...+. ...++++++++||+|++|+|++++ |+
T Consensus 115 ~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~---~~-~~~~~-~~~sl~ell~~aDiV~l~~Plt~~g~~~T~ 189 (381)
T 3oet_A 115 FSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPR---AA-RGDEG-DFRTLDELVQEADVLTFHTPLYKDGPYKTL 189 (381)
T ss_dssp CCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHH---HH-TTCCS-CBCCHHHHHHHCSEEEECCCCCCSSTTCCT
T ss_pred CccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCh---HH-hccCc-ccCCHHHHHhhCCEEEEcCcCCccccccch
Confidence 57999999999999999999999999999999999742 11 11233 346899999999999999999999 99
Q ss_pred hcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCCCCeEECCCCCcCCHH--H
Q 027577 108 GMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTID--L 185 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~~~~~~l~~~~n~~~tPH~a~~t~~--~ 185 (221)
++++++.|+.||+|++|||+|||+++|+++|+++|++|++.||+||||++||++. ++||.++ +++|||+||+|.| .
T Consensus 190 ~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e~EP~~~-~~L~~~~-~i~TPHiag~t~e~~~ 267 (381)
T 3oet_A 190 HLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWEGEPDLN-VALLEAV-DIGTSHIAGYTLEGKA 267 (381)
T ss_dssp TSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCC-HHHHHHS-SEECSSCTTCCHHHHH
T ss_pred hhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeeccccCCCCc-chhhhCC-EEECCccCcCcHHHHH
Confidence 9999999999999999999999999999999999999999999999999999875 4688765 8999999999999 6
Q ss_pred HHHHHHHHHHHHHHcCCC
Q 027577 186 RYAAGVKDMLDRYFKGED 203 (221)
Q Consensus 186 ~~~~~~~~~~~~~~~g~~ 203 (221)
++...+.+|+.+|+++.+
T Consensus 268 ~~~~~~~~~l~~~l~~~~ 285 (381)
T 3oet_A 268 RGTTQVFEAYSAFIGREQ 285 (381)
T ss_dssp HHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHcCCc
Confidence 777789999999998854
No 35
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=100.00 E-value=7.6e-40 Score=289.33 Aligned_cols=165 Identities=28% Similarity=0.474 Sum_probs=148.4
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChh----hh
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEK----TR 107 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~----t~ 107 (221)
.+|.|+||||||+|+||+.+|++++++|++|++||++.. . ...+.. ..++++++++||+|++|+|++++ |+
T Consensus 112 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~---~-~~~g~~-~~~l~ell~~aDvV~l~~Plt~~g~~~T~ 186 (380)
T 2o4c_A 112 ADLAERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQ---A-REPDGE-FVSLERLLAEADVISLHTPLNRDGEHPTR 186 (380)
T ss_dssp CCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHH---H-HSTTSC-CCCHHHHHHHCSEEEECCCCCSSSSSCCT
T ss_pred cccCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChh---h-hccCcc-cCCHHHHHHhCCEEEEeccCccccccchh
Confidence 479999999999999999999999999999999997431 1 123443 35899999999999999999999 99
Q ss_pred hcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCCCCeEECCCCCcCCHH--H
Q 027577 108 GMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTID--L 185 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~~~~~~l~~~~n~~~tPH~a~~t~~--~ 185 (221)
++++++.++.||+|+++||+|||+++|+++|.++|++|+|.+|+||||++||++ +++|+. +|+++|||+||+|.| .
T Consensus 187 ~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~EP~~-~~~l~~-~nvi~TPHiag~t~e~~~ 264 (380)
T 2o4c_A 187 HLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEGEPQA-DPELAA-RCLIATPHIAGYSLEGKL 264 (380)
T ss_dssp TSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSC-CHHHHT-TCSEECSSCTTCCHHHHH
T ss_pred hhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeeeccCCCC-chhhcc-CCEEEccccCcCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999965 456777 599999999999999 6
Q ss_pred HHHHHHHHHHHHHHcCCC
Q 027577 186 RYAAGVKDMLDRYFKGED 203 (221)
Q Consensus 186 ~~~~~~~~~~~~~~~g~~ 203 (221)
++...+.+|+.+|++|++
T Consensus 265 ~~~~~~~~nl~~~l~g~~ 282 (380)
T 2o4c_A 265 RGTAQIYQAYCAWRGIAE 282 (380)
T ss_dssp HHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHcCCC
Confidence 777789999999999985
No 36
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=99.97 E-value=8.8e-32 Score=243.47 Aligned_cols=184 Identities=15% Similarity=0.167 Sum_probs=157.0
Q ss_pred HHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCC
Q 027577 6 LVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEED 85 (221)
Q Consensus 6 ~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~ 85 (221)
+.|++....+.+++| |... .+.++.|+||||||+|.||+.+|++++++|++|++||+++.....+...|+.. .+
T Consensus 232 l~r~~~~~~~~l~~g-w~r~----~~~~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~-~~ 305 (479)
T 1v8b_A 232 KYDNVYGCRHSLPDG-LMRA----TDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNV-VT 305 (479)
T ss_dssp TTHHHHHHHHHHHHH-HHHH----HCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEE-CC
T ss_pred HHhchHhHHHHHhhh-hhhc----cccccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEe-cC
Confidence 457777777788888 8642 35689999999999999999999999999999999999754322344557764 48
Q ss_pred HHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCc-cCHHHHHH--HHHhCCceEEEeeCCCCCCCCC
Q 027577 86 LDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAI-MDTQAVVD--ACSSGHIAGYSGDVWNPQPAPK 162 (221)
Q Consensus 86 l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~-vd~~al~~--al~~g~i~~a~lDV~~~ep~~~ 162 (221)
+++++++||+|++|+ .+.++++.+.|+.||+|++|||++||.+ ||+++|.+ +|++|+|. +++||| |+|.
T Consensus 306 l~ell~~aDiVi~~~----~t~~lI~~~~l~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~---plp~ 377 (479)
T 1v8b_A 306 LDEIVDKGDFFITCT----GNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRI---TLPN 377 (479)
T ss_dssp HHHHTTTCSEEEECC----SSSSSBCHHHHTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEE---ECTT
T ss_pred HHHHHhcCCEEEECC----ChhhhcCHHHHhhcCCCcEEEEeCCCCccccchhhhccccceeeeEe-eeEEEE---ECCC
Confidence 999999999999995 5788999999999999999999999999 99999999 99999999 899998 4456
Q ss_pred CCCCCCC--CCeEECCCCC-cCCHH---HHHHHHHHHHHHHHHcCC--CC
Q 027577 163 DHPWRYM--PNQAMTPHVS-GTTID---LRYAAGVKDMLDRYFKGE--DF 204 (221)
Q Consensus 163 ~~~l~~~--~n~~~tPH~a-~~t~~---~~~~~~~~~~~~~~~~g~--~~ 204 (221)
++|||.+ ||+++| |+| +.+.+ .++...+.+|+..|++|+ ++
T Consensus 378 ~~~l~~l~~~nvv~t-H~atghp~e~~~~s~a~~~~~ni~~~~~g~~~~l 426 (479)
T 1v8b_A 378 GNKIIVLARGRLLNL-GCATGHPAFVMSFSFCNQTFAQLDLWQNKDTNKY 426 (479)
T ss_dssp SCEEEEEGGGSBHHH-HSSCCSCHHHHHHHHHHHHHHHHHHHHTTTSSSC
T ss_pred CCeeeEecCCCEEEE-eccCCCCchhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 8899999 999999 999 66644 456667899999999998 65
No 37
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=99.97 E-value=3.7e-32 Score=246.76 Aligned_cols=183 Identities=14% Similarity=0.167 Sum_probs=151.9
Q ss_pred HHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCC
Q 027577 6 LVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEED 85 (221)
Q Consensus 6 ~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~ 85 (221)
+.|++....+.+.+| |.. ..+.++.|+||||||+|.||+.+|++++++|++|++||+++.....+...|+.. .+
T Consensus 252 l~r~~~~~~~~l~~g-w~~----~~g~~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~-~~ 325 (494)
T 3d64_A 252 KFDNLYGCRESLVDG-IKR----ATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRV-VT 325 (494)
T ss_dssp HHHHHHHHHTTHHHH-HHH----HHCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEE-CC
T ss_pred HHhhhHhhhhhhhhh-hhh----ccccccCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEe-CC
Confidence 456666666666666 753 235689999999999999999999999999999999999753322333456665 48
Q ss_pred HHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCc-cCHHHHHHHHHhCCceEEEeeCCCCCCCCCCC
Q 027577 86 LDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAI-MDTQAVVDACSSGHIAGYSGDVWNPQPAPKDH 164 (221)
Q Consensus 86 l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~-vd~~al~~al~~g~i~~a~lDV~~~ep~~~~~ 164 (221)
+++++++||+|++|+ .|.++++.+.++.||+|++|||++||++ ||+++| ++|++|+|. +++|| +|+|.++
T Consensus 326 l~ell~~aDiVi~~~----~t~~lI~~~~l~~MK~gAilINvgrg~veID~~aL-~AL~~g~I~-~~~Dv---~plp~~~ 396 (494)
T 3d64_A 326 MEYAADKADIFVTAT----GNYHVINHDHMKAMRHNAIVCNIGHFDSEIDVAST-RQYQWENIK-PQVDH---IIFPDGK 396 (494)
T ss_dssp HHHHTTTCSEEEECS----SSSCSBCHHHHHHCCTTEEEEECSSSSCSBCCGGG-TTSEEEEEE-TTEEE---EECTTSC
T ss_pred HHHHHhcCCEEEECC----CcccccCHHHHhhCCCCcEEEEcCCCcchhchHHH-HhhhcCccc-eeEEE---EECCCCC
Confidence 999999999999998 4788999999999999999999999999 699999 999999988 55554 5777889
Q ss_pred CCCCC--CCeEECCCCC-cCCHH---HHHHHHHHHHHHHHHcCCCC
Q 027577 165 PWRYM--PNQAMTPHVS-GTTID---LRYAAGVKDMLDRYFKGEDF 204 (221)
Q Consensus 165 ~l~~~--~n~~~tPH~a-~~t~~---~~~~~~~~~~~~~~~~g~~~ 204 (221)
|||.+ ||+++| |+| +.+.+ .++...+.+|+..|++|+++
T Consensus 397 pL~~l~~~nvv~t-H~atg~~~~~~~~~~a~~~~~ni~~~~~g~~~ 441 (494)
T 3d64_A 397 RVILLAEGRLVNL-GCATGHPSFVMSNSFTNQTLAQIELFTRGGEY 441 (494)
T ss_dssp EEEEEGGGSBHHH-HTSCCSCHHHHHHHHHHHHHHHHHHHHHGGGS
T ss_pred chhhcCCCCEEEE-eCcCCCCHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 99999 999999 999 66744 55667789999999999875
No 38
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.86 E-value=1.3e-22 Score=184.49 Aligned_cols=164 Identities=16% Similarity=0.173 Sum_probs=136.7
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcch
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 111 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~ 111 (221)
..+.|++|+|+|+|.||+.+|+.++.+|++|+++|+++...+.+.+.|+.. .+++++++.+|+|+.|++ +.++++
T Consensus 270 ~~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~-~~l~e~l~~aDvVi~atg----t~~~i~ 344 (494)
T 3ce6_A 270 ALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDV-VTVEEAIGDADIVVTATG----NKDIIM 344 (494)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCHHHHGGGCSEEEECSS----SSCSBC
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEE-ecHHHHHhCCCEEEECCC----CHHHHH
Confidence 468999999999999999999999999999999999765545566778875 488999999999999986 456788
Q ss_pred HHHHhcCCCCCEEEEcCCCCc-cCHHHHHH-HHHhCCceEEEeeCCCCCCCCCCCC--CCCCCCeE----ECCCCCcCCH
Q 027577 112 KDRIAKMKKGVLIVNNARGAI-MDTQAVVD-ACSSGHIAGYSGDVWNPQPAPKDHP--WRYMPNQA----MTPHVSGTTI 183 (221)
Q Consensus 112 ~~~~~~mk~ga~lIn~srg~~-vd~~al~~-al~~g~i~~a~lDV~~~ep~~~~~~--l~~~~n~~----~tPH~a~~t~ 183 (221)
.+.++.||++++++|++|+.. +|+.+|.. +|+++.+. +.+|+++.++ ..++ ++..++++ +|||+++.+.
T Consensus 345 ~~~l~~mk~ggilvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~--~~~~l~LL~~grlvnL~~~TPH~a~~~~ 421 (494)
T 3ce6_A 345 LEHIKAMKDHAILGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGD--TGRSIIVLSEGRLLNLGNATGHPSFVMS 421 (494)
T ss_dssp HHHHHHSCTTCEEEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTT--TCCEEEEEGGGSCHHHHHSCCSCHHHHH
T ss_pred HHHHHhcCCCcEEEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCC--cchHHHHHhCCCEEeccCCCCCccccch
Confidence 889999999999999999998 99999988 78888887 6679886532 1445 55567887 9999998877
Q ss_pred HHHHHHHHHHHHHHHHcCCCC
Q 027577 184 DLRYAAGVKDMLDRYFKGEDF 204 (221)
Q Consensus 184 ~~~~~~~~~~~~~~~~~g~~~ 204 (221)
+. +...+.++++.|.+|+++
T Consensus 422 ~s-~~~qa~~ai~~~~~g~~~ 441 (494)
T 3ce6_A 422 NS-FANQTIAQIELWTKNDEY 441 (494)
T ss_dssp HH-HHHHHHHHHHHHHTGGGC
T ss_pred HH-HHHHHHHHHHHHHcCCCC
Confidence 63 456678899999998765
No 39
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.82 E-value=4.4e-22 Score=177.90 Aligned_cols=153 Identities=14% Similarity=0.194 Sum_probs=115.6
Q ss_pred ccC-CCCCEEEEEccCHHHHHHHHHHcc-CCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCE-EEEeCCCChhhh
Q 027577 31 AYD-LEGKTVGTVGCGRIGKLLLQRLKP-FNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDI-VVVNTPLTEKTR 107 (221)
Q Consensus 31 ~~~-l~g~~vgIIG~G~iG~~iA~~l~~-~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDv-Vv~~~p~~~~t~ 107 (221)
+.+ |+|+||+|+|+|+||+.+|+.+++ +|++|++++++... . .+...+ +++++++.+|. .++ +|+ ++|+
T Consensus 206 G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~--~---~~~~gv-dl~~L~~~~d~~~~l-~~l-~~t~ 277 (419)
T 1gtm_A 206 GWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGG--I---YNPDGL-NADEVLKWKNEHGSV-KDF-PGAT 277 (419)
T ss_dssp TCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCE--E---EEEEEE-CHHHHHHHHHHHSSS-TTC-TTSE
T ss_pred CCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCcc--c---cCccCC-CHHHHHHHHHhcCEe-ecC-ccCe
Confidence 456 999999999999999999999999 99999999643311 1 111222 56666654443 222 465 5677
Q ss_pred hcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCCCCC-CCCCCCCCeEECCCC----C---
Q 027577 108 GMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKD-HPWRYMPNQAMTPHV----S--- 179 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~~~~-~~l~~~~n~~~tPH~----a--- 179 (221)
+ ++.+.|..||+ .++||++||++||+++ +++|+.+.|.+++ +||.+++ ++|+..+|+++|||+ |
T Consensus 278 ~-i~~~~l~~mk~-dilIn~ArG~~Vde~a-~~aL~~~~I~~aA-----neP~t~~a~~ll~~~~V~itPhiaaNaGGvt 349 (419)
T 1gtm_A 278 N-ITNEELLELEV-DVLAPAAIEEVITKKN-ADNIKAKIVAEVA-----NGPVTPEADEILFEKGILQIPDFLCNAGGVT 349 (419)
T ss_dssp E-ECHHHHHHSCC-SEEEECSCSCCBCTTG-GGGCCCSEEECCS-----SSCBCHHHHHHHHHTTCEEECHHHHTTHHHH
T ss_pred e-eCHHHHHhCCC-CEEEECCCcccCCHHH-HHHhcCCEEEEee-----CCCCCcchHHHHhcCCEEEECchhhhCCcce
Confidence 7 78888888988 6999999999999999 6999999999887 8897654 789999999999999 5
Q ss_pred --------------cCCHH--HHHHHHHHHHHHHHH
Q 027577 180 --------------GTTID--LRYAAGVKDMLDRYF 199 (221)
Q Consensus 180 --------------~~t~~--~~~~~~~~~~~~~~~ 199 (221)
|.+.| .++...+.+++.+++
T Consensus 350 ~s~~E~~qn~~~~~w~~~ev~~~l~~~m~~~~~~~~ 385 (419)
T 1gtm_A 350 VSYFEWVQNITGYYWTIEEVRERLDKKMTKAFYDVY 385 (419)
T ss_dssp HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeehhhhcccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 33333 555555667766666
No 40
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.79 E-value=2.5e-19 Score=158.43 Aligned_cols=130 Identities=17% Similarity=0.232 Sum_probs=107.0
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh-cCce------ecCCHHhhcCCCCEEEEeC--CC
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-TGAK------FEEDLDTMLPKCDIVVVNT--PL 102 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-~g~~------~~~~l~ell~~aDvVv~~~--p~ 102 (221)
.++.|++|+|+|+|.||+.+++.++.+|++|+++|+++...+.+.+ .|.. ...+++++++++|+|+.++ |.
T Consensus 164 ~~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~ 243 (377)
T 2vhw_A 164 PGVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPG 243 (377)
T ss_dssp TTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCC
Confidence 3789999999999999999999999999999999997644333433 4432 1235678888999999977 54
Q ss_pred ChhhhhcchHHHHhcCCCCCEEEEcC--CCCccCHHHHHHHHHhCCceEEEeeCCCC-CCCCCCCCCCCCCCeE--ECCC
Q 027577 103 TEKTRGMFDKDRIAKMKKGVLIVNNA--RGAIMDTQAVVDACSSGHIAGYSGDVWNP-QPAPKDHPWRYMPNQA--MTPH 177 (221)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~lIn~s--rg~~vd~~al~~al~~g~i~~a~lDV~~~-ep~~~~~~l~~~~n~~--~tPH 177 (221)
+ ++..++.++.++.||++++|||++ +|+ ||+. ||.+.++|++..+|++ +|||
T Consensus 244 ~-~t~~li~~~~l~~mk~g~~iV~va~~~Gg----------------------v~e~~ep~~~~~~~~~~~~v~i~~~ph 300 (377)
T 2vhw_A 244 A-KAPKLVSNSLVAHMKPGAVLVDIAIDQGG----------------------CFEGSRPTTYDHPTFAVHDTLFYCVAN 300 (377)
T ss_dssp S-CCCCCBCHHHHTTSCTTCEEEEGGGGTTC----------------------SBTTCCCBCSSSCEEEETTEEEECBTT
T ss_pred C-CCcceecHHHHhcCCCCcEEEEEecCCCC----------------------ccccccCCCCCCCEEEECCEEEEecCC
Confidence 4 677888999999999999999998 332 6777 8888889999999988 9999
Q ss_pred CCcCCHH
Q 027577 178 VSGTTID 184 (221)
Q Consensus 178 ~a~~t~~ 184 (221)
+++.+..
T Consensus 301 l~~~~~~ 307 (377)
T 2vhw_A 301 MPASVPK 307 (377)
T ss_dssp GGGGSHH
T ss_pred cchhhHH
Confidence 9999866
No 41
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=99.73 E-value=3.8e-18 Score=152.30 Aligned_cols=105 Identities=21% Similarity=0.213 Sum_probs=91.1
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcc
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF 110 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i 110 (221)
+.++.||||+|+|+|.||+.+|++++++|++|+++|+++.....+...|+... ++++++++||+|+.+++ +.++|
T Consensus 242 g~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv-~LeElL~~ADIVv~atg----t~~lI 316 (464)
T 3n58_A 242 DVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVV-TLDDAASTADIVVTTTG----NKDVI 316 (464)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEEC-CHHHHGGGCSEEEECCS----SSSSB
T ss_pred CCcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceec-cHHHHHhhCCEEEECCC----Ccccc
Confidence 45799999999999999999999999999999999986533333445677654 89999999999998753 67899
Q ss_pred hHHHHhcCCCCCEEEEcCCCCc-cCHHHHHH
Q 027577 111 DKDRIAKMKKGVLIVNNARGAI-MDTQAVVD 140 (221)
Q Consensus 111 ~~~~~~~mk~ga~lIn~srg~~-vd~~al~~ 140 (221)
+.+.|+.||+|++|||++||.+ +|.++|.+
T Consensus 317 ~~e~l~~MK~GAILINvGRgdvEID~~aL~~ 347 (464)
T 3n58_A 317 TIDHMRKMKDMCIVGNIGHFDNEIQVAALRN 347 (464)
T ss_dssp CHHHHHHSCTTEEEEECSSSTTTBTCGGGTT
T ss_pred CHHHHhcCCCCeEEEEcCCCCcccCHHHHHh
Confidence 9999999999999999999998 99988874
No 42
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.72 E-value=1.5e-17 Score=148.40 Aligned_cols=106 Identities=14% Similarity=0.241 Sum_probs=92.3
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcc
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF 110 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i 110 (221)
+.++.|++|+|+|+|.||+.+|+.|+++|++|+++|+++.....+...|+... ++++++++||+|+++. .+.+++
T Consensus 206 g~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~-sL~eal~~ADVVilt~----gt~~iI 280 (436)
T 3h9u_A 206 DVMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVL-LVEDVVEEAHIFVTTT----GNDDII 280 (436)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-CHHHHTTTCSEEEECS----SCSCSB
T ss_pred CCcccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeec-CHHHHHhhCCEEEECC----CCcCcc
Confidence 46799999999999999999999999999999999997644444555677654 8999999999999743 577889
Q ss_pred hHHHHhcCCCCCEEEEcCCCCc-cCHHHHHHH
Q 027577 111 DKDRIAKMKKGVLIVNNARGAI-MDTQAVVDA 141 (221)
Q Consensus 111 ~~~~~~~mk~ga~lIn~srg~~-vd~~al~~a 141 (221)
+.+.|+.||+|++|||++||.+ ||.++|.+.
T Consensus 281 ~~e~l~~MK~gAIVINvgRg~vEID~~~L~~~ 312 (436)
T 3h9u_A 281 TSEHFPRMRDDAIVCNIGHFDTEIQVAWLKAN 312 (436)
T ss_dssp CTTTGGGCCTTEEEEECSSSGGGBCHHHHHHH
T ss_pred CHHHHhhcCCCcEEEEeCCCCCccCHHHHHhh
Confidence 9999999999999999999997 999999764
No 43
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.67 E-value=1.2e-16 Score=137.25 Aligned_cols=116 Identities=18% Similarity=0.236 Sum_probs=103.3
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchH--HH
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK--DR 114 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~--~~ 114 (221)
+|||+||+|.||..+|++|...|++|.+|||++.+.+.+.+.|.....++.|+++.||+|++|+|..+..+.++.. ..
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~ 83 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhh
Confidence 5899999999999999999999999999999876667777789998999999999999999999988888777643 36
Q ss_pred HhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeC
Q 027577 115 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 154 (221)
Q Consensus 115 ~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV 154 (221)
++.+++|.++||++...+-+...+.+.+++..+. ++|.
T Consensus 84 ~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~--~lDa 121 (300)
T 3obb_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGLA--MLDA 121 (300)
T ss_dssp TTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCE--EEEC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE--EEec
Confidence 7889999999999999999999999999999887 7783
No 44
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.66 E-value=1.4e-16 Score=141.80 Aligned_cols=104 Identities=17% Similarity=0.300 Sum_probs=89.0
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcc
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF 110 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i 110 (221)
+..+.|++|+|+|+|.||+.+|+.++++|++|+++|+++.....+...|+.. .+++++++++|+|++| +.+.+++
T Consensus 215 ~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v-~~Leeal~~ADIVi~a----tgt~~lI 289 (435)
T 3gvp_A 215 DMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRL-VKLNEVIRQVDIVITC----TGNKNVV 289 (435)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCHHHHTTTCSEEEEC----SSCSCSB
T ss_pred CceecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEe-ccHHHHHhcCCEEEEC----CCCcccC
Confidence 4579999999999999999999999999999999998753333445567655 4899999999999995 3577899
Q ss_pred hHHHHhcCCCCCEEEEcCCCCc-cCHHHHH
Q 027577 111 DKDRIAKMKKGVLIVNNARGAI-MDTQAVV 139 (221)
Q Consensus 111 ~~~~~~~mk~ga~lIn~srg~~-vd~~al~ 139 (221)
+.+.|+.||+|++|||++||.+ +|.++|.
T Consensus 290 ~~e~l~~MK~gailINvgrg~~EId~~~L~ 319 (435)
T 3gvp_A 290 TREHLDRMKNSCIVCNMGHSNTEIDVASLR 319 (435)
T ss_dssp CHHHHHHSCTTEEEEECSSTTTTBTGGGGC
T ss_pred CHHHHHhcCCCcEEEEecCCCccCCHHHHH
Confidence 9999999999999999999988 7776663
No 45
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.66 E-value=2.3e-16 Score=135.15 Aligned_cols=117 Identities=13% Similarity=0.113 Sum_probs=100.0
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHH
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRI 115 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~ 115 (221)
.+||||||+|.||..+|++|...|++|++||+++...+.+.+.|+....++.|+++++|+|++|+|..+....++....+
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~ 84 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELV 84 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHH
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHH
Confidence 36899999999999999999999999999999887777677788888899999999999999999977777777777788
Q ss_pred hcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeC
Q 027577 116 AKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 154 (221)
Q Consensus 116 ~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV 154 (221)
..++++.++||++...+-+...+.+.+.+..+. ++|.
T Consensus 85 ~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~--~lda 121 (297)
T 4gbj_A 85 EKLGKDGVHVSMSTISPETSRQLAQVHEWYGAH--YVGA 121 (297)
T ss_dssp HHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEEC
T ss_pred hhcCCCeEEEECCCCChHHHHHHHHHHHhcCCc--eecC
Confidence 999999999999999999999999999999887 6774
No 46
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.65 E-value=3.4e-16 Score=133.72 Aligned_cols=97 Identities=15% Similarity=0.231 Sum_probs=82.6
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec--CCHHhhcCCCCEEEEeCCCChhhhh
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE--EDLDTMLPKCDIVVVNTPLTEKTRG 108 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~--~~l~ell~~aDvVv~~~p~~~~t~~ 108 (221)
+.++.|+||||||+|.||+.+|+.++++|++|+++|++....+.+.+.|+... .+++++++++|+|++|+|. +
T Consensus 150 ~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-----~ 224 (293)
T 3d4o_A 150 DFTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPA-----L 224 (293)
T ss_dssp SSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSS-----C
T ss_pred CCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCCh-----H
Confidence 45799999999999999999999999999999999997543333445566542 5788999999999999994 6
Q ss_pred cchHHHHhcCCCCCEEEEcCCCCc
Q 027577 109 MFDKDRIAKMKKGVLIVNNARGAI 132 (221)
Q Consensus 109 ~i~~~~~~~mk~ga~lIn~srg~~ 132 (221)
+++++.++.||+++++||++||..
T Consensus 225 ~i~~~~l~~mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 225 VVTANVLAEMPSHTFVIDLASKPG 248 (293)
T ss_dssp CBCHHHHHHSCTTCEEEECSSTTC
T ss_pred HhCHHHHHhcCCCCEEEEecCCCC
Confidence 788889999999999999999754
No 47
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.65 E-value=4.3e-16 Score=133.40 Aligned_cols=98 Identities=19% Similarity=0.306 Sum_probs=82.9
Q ss_pred cccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCcee--cCCHHhhcCCCCEEEEeCCCChhhh
Q 027577 30 RAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKF--EEDLDTMLPKCDIVVVNTPLTEKTR 107 (221)
Q Consensus 30 ~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~--~~~l~ell~~aDvVv~~~p~~~~t~ 107 (221)
.+.++.|+||||||+|.||+.+|+.++++|++|++||++....+.+.+.|+.. ..+++++++++|+|++|+|.
T Consensus 151 ~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~----- 225 (300)
T 2rir_A 151 TDYTIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPS----- 225 (300)
T ss_dssp CSSCSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSS-----
T ss_pred cCCCCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCCh-----
Confidence 35689999999999999999999999999999999999754333333456543 35789999999999999994
Q ss_pred hcchHHHHhcCCCCCEEEEcCCCCc
Q 027577 108 GMFDKDRIAKMKKGVLIVNNARGAI 132 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn~srg~~ 132 (221)
++++++.++.||+++++||++||..
T Consensus 226 ~~i~~~~~~~mk~g~~lin~a~g~~ 250 (300)
T 2rir_A 226 MILNQTVLSSMTPKTLILDLASRPG 250 (300)
T ss_dssp CCBCHHHHTTSCTTCEEEECSSTTC
T ss_pred hhhCHHHHHhCCCCCEEEEEeCCCC
Confidence 6788889999999999999999854
No 48
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=99.63 E-value=7.9e-17 Score=141.90 Aligned_cols=153 Identities=16% Similarity=0.218 Sum_probs=99.8
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh-cCcee------cCCHHhhcCCCCEEEEeCCCCh
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-TGAKF------EEDLDTMLPKCDIVVVNTPLTE 104 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-~g~~~------~~~l~ell~~aDvVv~~~p~~~ 104 (221)
.++.+++|+|+|.|.||+.+++.++.+|++|+++|+++...+.+.+ .+... ..+++++++.+|+|+.|++...
T Consensus 162 ~~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~ 241 (369)
T 2eez_A 162 PGVAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPG 241 (369)
T ss_dssp TBBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC---
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCc
Confidence 3689999999999999999999999999999999987543333333 34321 2356677889999999998654
Q ss_pred -hhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCCCCeE---------E
Q 027577 105 -KTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQA---------M 174 (221)
Q Consensus 105 -~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~~~~~~l~~~~n~~---------~ 174 (221)
.+..++.++.++.|++++++||++-. .| |+ +||+ ||.+.++|++..+++. .
T Consensus 242 ~~~~~li~~~~l~~mk~gg~iV~v~~~-------------~g---g~-~d~~--ep~~~~~~~~~~~~v~~~~v~~lp~~ 302 (369)
T 2eez_A 242 AKAPKLVTRDMLSLMKEGAVIVDVAVD-------------QG---GC-VETI--RPTTHAEPTYVVDGVVHYGVANMPGA 302 (369)
T ss_dssp ----CCSCHHHHTTSCTTCEEEECC--------------------------------------CEETTEEEECCSCSGGG
T ss_pred cccchhHHHHHHHhhcCCCEEEEEecC-------------CC---CC-CCcc--cCCCCCCCEEEECCEEEEeeCCcchh
Confidence 56677888999999999999999832 12 34 8988 6767778899999998 8
Q ss_pred CCCCCcCC--HH--HHHHHHHHHHHHHHHcCCC
Q 027577 175 TPHVSGTT--ID--LRYAAGVKDMLDRYFKGED 203 (221)
Q Consensus 175 tPH~a~~t--~~--~~~~~~~~~~~~~~~~g~~ 203 (221)
|||+|+.. .+ .++...+.+++..+..++.
T Consensus 303 ~p~~as~~~~~~~~~~l~~l~~~g~~~~~~~~~ 335 (369)
T 2eez_A 303 VPRTSTFALTNQTLPYVLKLAEKGLDALLEDAA 335 (369)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTHHHHSCHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcChhhhhcChH
Confidence 89988753 33 3444445555666776654
No 49
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.60 E-value=1.6e-14 Score=124.68 Aligned_cols=158 Identities=11% Similarity=0.030 Sum_probs=105.5
Q ss_pred HcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCC--eEEEEcCCCCChhHHHhcCc--eecCCHHh-hcCC
Q 027577 18 ISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQLEKETGA--KFEEDLDT-MLPK 92 (221)
Q Consensus 18 ~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~g~--~~~~~l~e-ll~~ 92 (221)
-.+.|.....+ ...++.-++|||||+|.||.++|+.|+..|+ +|++||+++...+.+.+.|+ ....++++ ++++
T Consensus 16 ~~~~~~~~~~~-~~~~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~ 94 (314)
T 3ggo_A 16 PRGSHMKNIIK-ILKSLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFS 94 (314)
T ss_dssp --------------CCCSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGC
T ss_pred ccccCcCcCCc-hhhhcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhcc
Confidence 34566543322 1234556899999999999999999999999 99999997655555666676 44568888 8999
Q ss_pred CCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCC---CCCCCCCCCCC
Q 027577 93 CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQ---PAPKDHPWRYM 169 (221)
Q Consensus 93 aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~e---p~~~~~~l~~~ 169 (221)
||+|++|+|... +..++ ++....++++++|++++.......+++.+.+.. +..+ .--++..| |......|+.-
T Consensus 95 aDvVilavp~~~-~~~vl-~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~-~~v~-~hPm~G~e~sG~~~A~~~Lf~g 170 (314)
T 3ggo_A 95 PDFVMLSSPVRT-FREIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILGK-RFVG-GHPIAGTEKSGVEYSLDNLYEG 170 (314)
T ss_dssp CSEEEECSCGGG-HHHHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG-GEEC-EEECCCCCCCSGGGCCTTTTTT
T ss_pred CCEEEEeCCHHH-HHHHH-HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC-CEEe-cCcccCCcccchhhhhhhhhcC
Confidence 999999999443 33333 556677999999999987765556667666654 2221 12334333 33344567777
Q ss_pred CCeEECCCCCc
Q 027577 170 PNQAMTPHVSG 180 (221)
Q Consensus 170 ~n~~~tPH~a~ 180 (221)
..+++||+-++
T Consensus 171 ~~~il~~~~~~ 181 (314)
T 3ggo_A 171 KKVILTPTKKT 181 (314)
T ss_dssp CEEEECCCTTS
T ss_pred CEEEEEeCCCC
Confidence 78999998554
No 50
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.59 E-value=4.1e-15 Score=128.01 Aligned_cols=136 Identities=13% Similarity=0.148 Sum_probs=94.4
Q ss_pred HHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCC--CChhHHHhcCceecCCHHhhc
Q 027577 14 HHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVK--MDPQLEKETGAKFEEDLDTML 90 (221)
Q Consensus 14 ~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~--~~~~~~~~~g~~~~~~l~ell 90 (221)
++..+.+.|.....-........++|||||+|.||..+|+.|...|+ +|.+||+++ ...+.+.+.|+....++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~ 81 (312)
T 3qsg_A 2 HHHHHHSSGVDLGTENLYFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVA 81 (312)
T ss_dssp -----------------------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHH
T ss_pred CcccccccccccCcccccccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHH
Confidence 45667777764432122334456899999999999999999999999 999999963 444555667888888999999
Q ss_pred CCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhC--CceEEEee
Q 027577 91 PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG--HIAGYSGD 153 (221)
Q Consensus 91 ~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g--~i~~a~lD 153 (221)
++||+|++|+|...... .+ .+....++++++|||++...+....++.+.+.+. .+. .+|
T Consensus 82 ~~aDvVi~~vp~~~~~~-~~-~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~--~vd 142 (312)
T 3qsg_A 82 GECDVIFSLVTAQAALE-VA-QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQ--YAA 142 (312)
T ss_dssp HHCSEEEECSCTTTHHH-HH-HHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCE--EEE
T ss_pred hcCCEEEEecCchhHHH-HH-HhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCe--EEe
Confidence 99999999999655443 22 5677889999999999999999999999988876 444 455
No 51
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.59 E-value=1.5e-15 Score=130.30 Aligned_cols=120 Identities=14% Similarity=0.079 Sum_probs=100.9
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchH
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK 112 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~ 112 (221)
++..++|||||+|.||..+|+.|...|++|.+||+++...+.+.+.|+....+++++++++|+|++|+|....++.++..
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~ 85 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLGM 85 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHTS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhcc
Confidence 46678999999999999999999999999999999865555555668887889999999999999999976667776642
Q ss_pred HHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeC
Q 027577 113 DRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 154 (221)
Q Consensus 113 ~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV 154 (221)
+.+..++++.++||+++..+.+...+.+.+.+..+. ++|.
T Consensus 86 ~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~--~vda 125 (306)
T 3l6d_A 86 PGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGH--YVKG 125 (306)
T ss_dssp TTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCE--EEEE
T ss_pred cchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCe--EEec
Confidence 234557899999999999999999999999887776 5563
No 52
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.59 E-value=1.4e-14 Score=122.26 Aligned_cols=141 Identities=10% Similarity=0.042 Sum_probs=103.8
Q ss_pred CEEEEEccCHHHHHHHHHHccCCC--eEEEEcCCCCChhHHHhcCce--ecCCHHhhcC-CCCEEEEeCCCChhhhhcch
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQLEKETGAK--FEEDLDTMLP-KCDIVVVNTPLTEKTRGMFD 111 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~g~~--~~~~l~ell~-~aDvVv~~~p~~~~t~~~i~ 111 (221)
++|+|||+|.||..+|+.|...|+ +|++||+++...+.+.+.|+. ...+++++++ ++|+|++|+|.. .+..++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~~ 80 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFREIAK 80 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH-HHHHHHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH-HHHHHHH
Confidence 589999999999999999999998 999999976544555556663 3457888899 999999999933 3444443
Q ss_pred HHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCC---CCCCCCCCCCCCCeEECCCCCcC
Q 027577 112 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQ---PAPKDHPWRYMPNQAMTPHVSGT 181 (221)
Q Consensus 112 ~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~e---p~~~~~~l~~~~n~~~tPH~a~~ 181 (221)
+....++++++|++++++.....+.+.+.+.++.+. ..-++..| |....++++...+++++||.++.
T Consensus 81 -~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~~v~--~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~ 150 (281)
T 2g5c_A 81 -KLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVG--GHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTD 150 (281)
T ss_dssp -HHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEEC--EEEECCCSCCSGGGCCSSTTTTCEEEECCCSSSC
T ss_pred -HHHhhCCCCcEEEECCCCcHHHHHHHHHhcccccee--eccccCCccCChhhhhhHHhCCCCEEEecCCCCC
Confidence 456678999999999988766667788888764222 12233333 33345567777789999998764
No 53
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.59 E-value=2.9e-15 Score=129.37 Aligned_cols=119 Identities=20% Similarity=0.168 Sum_probs=100.1
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchH
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK 112 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~ 112 (221)
....++|||||+|.||..+|+.|...|++|.+||+++...+.+.+.|+....+++++++++|+|++|+|.....+.++..
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~ 107 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFA 107 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTT
T ss_pred ccCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcc
Confidence 45678999999999999999999999999999999765555555668887889999999999999999966666655532
Q ss_pred -HHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEee
Q 027577 113 -DRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGD 153 (221)
Q Consensus 113 -~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lD 153 (221)
+.+..++++.+|||++++.+.+.+.+.+.+.+..+. .+|
T Consensus 108 ~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~--~~~ 147 (320)
T 4dll_A 108 QGVAAAMKPGSLFLDMASITPREARDHAARLGALGIA--HLD 147 (320)
T ss_dssp TCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEE
T ss_pred hhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCE--EEe
Confidence 566779999999999999999999999999887776 455
No 54
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.58 E-value=5.3e-15 Score=126.33 Aligned_cols=114 Identities=14% Similarity=0.184 Sum_probs=99.7
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHH
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRI 115 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~ 115 (221)
.++|||||+|.||..+|+.|...|++|.+||+++...+.+.+.|+....+++++++ +|+|++|+|....++.++ .+..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~-~~l~ 92 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV-GELA 92 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH-HHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH-HHHH
Confidence 46899999999999999999999999999999887777777778888889999999 999999999666666666 6677
Q ss_pred hcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEee
Q 027577 116 AKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGD 153 (221)
Q Consensus 116 ~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lD 153 (221)
..++++.++||+++..+...+.+.+.+.+..+. .+|
T Consensus 93 ~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~--~~~ 128 (296)
T 3qha_A 93 GHAKPGTVIAIHSTISDTTAVELARDLKARDIH--IVD 128 (296)
T ss_dssp TTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCE--EEE
T ss_pred HhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCE--EEe
Confidence 889999999999999999899999999887666 455
No 55
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.58 E-value=5.9e-15 Score=126.81 Aligned_cols=120 Identities=13% Similarity=0.089 Sum_probs=101.1
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcc-
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF- 110 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i- 110 (221)
....-++|||||+|.||..+|+.|...|++|.+||+++...+.+.+.|+....++++++++||+|++|+|....++.++
T Consensus 17 ~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~ 96 (310)
T 3doj_A 17 RGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVF 96 (310)
T ss_dssp -CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred ccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHh
Confidence 3455689999999999999999999999999999998766666677788888899999999999999999655666555
Q ss_pred -hHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEee
Q 027577 111 -DKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGD 153 (221)
Q Consensus 111 -~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lD 153 (221)
..+.+..++++.+|||+++..+...+.+.+.+.+..+. .+|
T Consensus 97 ~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~--~v~ 138 (310)
T 3doj_A 97 DKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGR--FVE 138 (310)
T ss_dssp STTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEE
T ss_pred CchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCE--EEe
Confidence 24556788999999999999998889999999887666 455
No 56
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.57 E-value=9e-15 Score=124.08 Aligned_cols=115 Identities=12% Similarity=0.112 Sum_probs=99.2
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcch--HHH
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD--KDR 114 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~--~~~ 114 (221)
++|||||+|.||..+|+.|...|++|.+||+++...+.+.+.|+....+++++++++|+|++|+|....++.++. .+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 789999999999999999999999999999987666666677888888999999999999999996666666652 556
Q ss_pred HhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEee
Q 027577 115 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGD 153 (221)
Q Consensus 115 ~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lD 153 (221)
...+++++++||+++..+.+.+.+.+.+.+..+. .+|
T Consensus 82 ~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~--~~~ 118 (287)
T 3pef_A 82 LEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGR--FLE 118 (287)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEE
T ss_pred hhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCE--EEE
Confidence 7789999999999999998899999999887666 455
No 57
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.55 E-value=9.9e-15 Score=128.09 Aligned_cols=121 Identities=14% Similarity=0.183 Sum_probs=101.1
Q ss_pred CCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCC---CEEEEeCCCChhhhhcc
Q 027577 34 LEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKC---DIVVVNTPLTEKTRGMF 110 (221)
Q Consensus 34 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~a---DvVv~~~p~~~~t~~~i 110 (221)
+.+++|||||+|.||..+|+.|...|++|.+||+++...+.+.+.|+....+++++++.+ |+|++|+|.. .+..++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl 98 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML 98 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH
Confidence 567999999999999999999999999999999986555556666787778999999888 9999999965 666655
Q ss_pred hHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCC
Q 027577 111 DKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWN 156 (221)
Q Consensus 111 ~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~ 156 (221)
.+....++++.+|||++++...+...+.+.+.+..+......|+.
T Consensus 99 -~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsG 143 (358)
T 4e21_A 99 -QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSG 143 (358)
T ss_dssp -HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEEC
T ss_pred -HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCC
Confidence 567788999999999999999999999999999888744444443
No 58
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.54 E-value=9.4e-15 Score=123.98 Aligned_cols=115 Identities=14% Similarity=0.094 Sum_probs=97.9
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcch--HHH
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD--KDR 114 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~--~~~ 114 (221)
++|||||+|.||..+|+.|...|++|.+||+++...+.+.+.|+....++++++++||+|++|+|..+.++.++. .+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l 81 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGV 81 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhh
Confidence 579999999999999999999999999999987666666667888888999999999999999996556666552 455
Q ss_pred HhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEee
Q 027577 115 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGD 153 (221)
Q Consensus 115 ~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lD 153 (221)
+..++++.++||++++.+.+.+.+.+.+.+..+. .+|
T Consensus 82 ~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~--~~~ 118 (287)
T 3pdu_A 82 LEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGR--FLE 118 (287)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEE
T ss_pred hhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCE--EEE
Confidence 6778999999999999998889999998887665 455
No 59
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.53 E-value=1.3e-14 Score=124.19 Aligned_cols=116 Identities=16% Similarity=0.059 Sum_probs=96.3
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCcee-cCCHHhhcCCCCEEEEeCCCChhhhhcch--H
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKF-EEDLDTMLPKCDIVVVNTPLTEKTRGMFD--K 112 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~-~~~l~ell~~aDvVv~~~p~~~~t~~~i~--~ 112 (221)
.++|||||+|.||..+|+.|...|++|.+||+++...+.+.+.|... ..++++++++||+|++|+|.....+.++. +
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~ 86 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED 86 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence 47899999999999999999999999999999765555556667765 67899999999999999996555655542 4
Q ss_pred HHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEee
Q 027577 113 DRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGD 153 (221)
Q Consensus 113 ~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lD 153 (221)
+....+++++++||+++..+...+.+.+.+.+..+. .+|
T Consensus 87 ~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~--~~~ 125 (303)
T 3g0o_A 87 GVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLN--MLD 125 (303)
T ss_dssp CCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCE--EEE
T ss_pred hHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCe--EEe
Confidence 456778999999999999988888999999887665 455
No 60
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.52 E-value=2.3e-14 Score=122.23 Aligned_cols=115 Identities=18% Similarity=0.238 Sum_probs=97.1
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcch--HHH
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD--KDR 114 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~--~~~ 114 (221)
++|+|||+|.||..+|+.|...|++|.+||+++...+.+.+.|+....+++++++++|+|++|+|....++.++. .+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~ 83 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCG
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhH
Confidence 689999999999999999999999999999976555556666888888999999999999999996666666554 156
Q ss_pred HhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEee
Q 027577 115 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGD 153 (221)
Q Consensus 115 ~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lD 153 (221)
...+++++++||++.+.....+.+.+.+.+..+. .+|
T Consensus 84 ~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~--~~~ 120 (302)
T 2h78_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGLA--MLD 120 (302)
T ss_dssp GGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCC--EEE
T ss_pred HhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCE--EEE
Confidence 6788999999999999998888999999876555 455
No 61
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.51 E-value=5.9e-14 Score=118.95 Aligned_cols=143 Identities=15% Similarity=0.149 Sum_probs=101.6
Q ss_pred CCEEEEEccCHHHHHHHHHHccC--CCeEEEEcCCCCChhHHHhcCc--eecCCHHhhcCCCCEEEEeCCCChhhhhcch
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPF--NCNLLYHDRVKMDPQLEKETGA--KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 111 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~g~--~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~ 111 (221)
-++|||||+|.||..+|+.|... |++|++||+++...+.+.+.|. ....+++++++++|+|++|+|.. ....++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~- 83 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIK-KTIDFI- 83 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHH-HHHHHH-
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHH-HHHHHH-
Confidence 36899999999999999999866 6899999997544444445565 34567888889999999999933 234444
Q ss_pred HHHHhc-CCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEee---CCCC---CCCCCCCCCCCCCCeEECCCCCcCC
Q 027577 112 KDRIAK-MKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGD---VWNP---QPAPKDHPWRYMPNQAMTPHVSGTT 182 (221)
Q Consensus 112 ~~~~~~-mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lD---V~~~---ep~~~~~~l~~~~n~~~tPH~a~~t 182 (221)
.+.... ++++++|++++.......+.+.+.+.+..+. .++ ++.. .|......++.-..++++||.++..
T Consensus 84 ~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~--~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~~~~ 159 (290)
T 3b1f_A 84 KILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQ--FVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCLTKP 159 (290)
T ss_dssp HHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCE--EEEEEEC-----CCTTSCCTTTTTTSEEEEEECTTCCT
T ss_pred HHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCE--EEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCCCCH
Confidence 345566 8999999999887766667787777652333 233 2221 3444445677777799999987643
No 62
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.50 E-value=6.4e-14 Score=120.90 Aligned_cols=136 Identities=14% Similarity=0.009 Sum_probs=94.6
Q ss_pred HHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCC-CeEEEEcCCCC-------ChhHHHhcCceecC
Q 027577 13 GHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFN-CNLLYHDRVKM-------DPQLEKETGAKFEE 84 (221)
Q Consensus 13 ~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G-~~V~~~d~~~~-------~~~~~~~~g~~~~~ 84 (221)
++.+.+.+.|...-. ... ..++|||||+|.||..+|+.|...| ++|++||+++. ..+.+.+.|+ ..
T Consensus 5 ~~~~~~~~~~~~~~~---~~~-M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~--~~ 78 (317)
T 4ezb_A 5 HHHSSGVDLGTENLY---FQS-MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV--EP 78 (317)
T ss_dssp ----------CCCHH---HHT-SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC--EE
T ss_pred cccccccccCcccCc---ccc-cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC--CC
Confidence 344555566764321 011 2479999999999999999999999 99999998752 1222334466 45
Q ss_pred -CHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCC
Q 027577 85 -DLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWN 156 (221)
Q Consensus 85 -~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~ 156 (221)
++++++++||+|++|+|.......+ .+....++++.+|||+++..+...+.+.+.+.+..+.....-|+.
T Consensus 79 ~s~~e~~~~aDvVi~avp~~~~~~~~--~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g 149 (317)
T 4ezb_A 79 LDDVAGIACADVVLSLVVGAATKAVA--ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMA 149 (317)
T ss_dssp ESSGGGGGGCSEEEECCCGGGHHHHH--HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECS
T ss_pred CCHHHHHhcCCEEEEecCCHHHHHHH--HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCC
Confidence 7889999999999999965544432 567788999999999999999999999999988766532223444
No 63
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=99.48 E-value=3.6e-14 Score=126.37 Aligned_cols=139 Identities=19% Similarity=0.266 Sum_probs=100.5
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCCh-hHHHhcCcee--cCCHHhhcCCCCEEEEeCCCChhhhh
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDP-QLEKETGAKF--EEDLDTMLPKCDIVVVNTPLTEKTRG 108 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~--~~~l~ell~~aDvVv~~~p~~~~t~~ 108 (221)
++.|++|+|||+|.||+.+++.++.+|+ +|+++||+.... +.+...|... ..++.+++..+|+|+.|+|.+ ..
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~~---~~ 240 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAP---HP 240 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSS---SC
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCCC---Cc
Confidence 5889999999999999999999999999 899999976433 4455566653 246778888999999998743 34
Q ss_pred cchHHHHhc--CC----CCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCCCCeEE--CCCCCc
Q 027577 109 MFDKDRIAK--MK----KGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAM--TPHVSG 180 (221)
Q Consensus 109 ~i~~~~~~~--mk----~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~~~~~~l~~~~n~~~--tPH~a~ 180 (221)
+++.+.++. || ++.++||++ +|.+.+++++++||+++ +||+++
T Consensus 241 ~~~~~~l~~~~lk~r~~~~~v~vdia-----------------------------~P~~i~~~l~~l~~v~l~d~d~l~~ 291 (404)
T 1gpj_A 241 VIHVDDVREALRKRDRRSPILIIDIA-----------------------------NPRDVEEGVENIEDVEVRTIDDLRV 291 (404)
T ss_dssp CBCHHHHHHHHHHCSSCCCEEEEECC-----------------------------SSCSBCTTGGGSTTEEEEEHHHHHH
T ss_pred eecHHHHHHHHHhccCCCCEEEEEcc-----------------------------CCCCCCccccccCCeEEEeHhhHHH
Confidence 565556655 32 344555543 36555678999999999 999998
Q ss_pred CCHHH------------HHHHHHHHHHHHHHcCCC
Q 027577 181 TTIDL------------RYAAGVKDMLDRYFKGED 203 (221)
Q Consensus 181 ~t~~~------------~~~~~~~~~~~~~~~g~~ 203 (221)
.+.+. .+.....+++..|+.+.+
T Consensus 292 ~~~~~~~~r~~~~~~~~~li~q~~~~f~~w~~~~~ 326 (404)
T 1gpj_A 292 IARENLERRRKEIPKVEKLIEEELSTVEEELEKLK 326 (404)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 88761 222233455667776543
No 64
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.47 E-value=5.6e-13 Score=113.01 Aligned_cols=132 Identities=12% Similarity=0.086 Sum_probs=99.4
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhc-------------------------CceecCCHHhhcC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET-------------------------GAKFEEDLDTMLP 91 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~-------------------------g~~~~~~l~ell~ 91 (221)
++|+|||+|.||..+|+.+...|++|++||+++...+.+.+. .+....+++++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVK 84 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhc
Confidence 689999999999999999999999999999976433322221 1345678899999
Q ss_pred CCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCCCC
Q 027577 92 KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPN 171 (221)
Q Consensus 92 ~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~~~~~~l~~~~n 171 (221)
+||+|+.++|.+.+....+..+....+++++++++.+.+ +...++.+.+... -...++..+. |.+..+.
T Consensus 85 ~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~--~~~~~la~~~~~~-~~~ig~h~~~--------p~~~~~l 153 (283)
T 4e12_A 85 DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSST--LLPSDLVGYTGRG-DKFLALHFAN--------HVWVNNT 153 (283)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHHHHSCG-GGEEEEEECS--------STTTSCE
T ss_pred cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCC--CCHHHHHhhcCCC-cceEEEccCC--------CcccCce
Confidence 999999999977667666667778889999999966554 3567787777543 3445666542 3455677
Q ss_pred eEECCCCC
Q 027577 172 QAMTPHVS 179 (221)
Q Consensus 172 ~~~tPH~a 179 (221)
+.++||-.
T Consensus 154 vevv~~~~ 161 (283)
T 4e12_A 154 AEVMGTTK 161 (283)
T ss_dssp EEEEECTT
T ss_pred EEEEeCCC
Confidence 88899854
No 65
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.43 E-value=2.7e-13 Score=123.19 Aligned_cols=120 Identities=12% Similarity=0.133 Sum_probs=97.3
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhc---C--ceecCCHHhhcC---CCCEEEEeCCCChhhh
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET---G--AKFEEDLDTMLP---KCDIVVVNTPLTEKTR 107 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~---g--~~~~~~l~ell~---~aDvVv~~~p~~~~t~ 107 (221)
.++|||||+|.||..+|+.|...|++|.+||+++...+.+.+. + +....+++++++ ++|+|++++|..+.++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 83 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVD 83 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHH
Confidence 4689999999999999999999999999999987554444333 2 334578888876 5999999999777777
Q ss_pred hcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCC
Q 027577 108 GMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWN 156 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~ 156 (221)
.++ .+....|++|.+|||++++...+...+.+.+.+..+.....-|..
T Consensus 84 ~vl-~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsG 131 (484)
T 4gwg_A 84 DFI-EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSG 131 (484)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred HHH-HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccC
Confidence 766 567788999999999999999999999999998888744444443
No 66
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.42 E-value=4.5e-13 Score=121.80 Aligned_cols=115 Identities=11% Similarity=0.115 Sum_probs=94.1
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhc----CceecCCHHhhcCC---CCEEEEeCCCChh
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET----GAKFEEDLDTMLPK---CDIVVVNTPLTEK 105 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~----g~~~~~~l~ell~~---aDvVv~~~p~~~~ 105 (221)
..+.++|||||+|.||+.+|+.|...|++|.+|||++...+.+.+. |+....+++++++. +|+|++++|....
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~ 91 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAG 91 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHH
Confidence 4667899999999999999999999999999999976444444333 67777889998876 9999999997667
Q ss_pred hhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 106 TRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 106 t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
++.++ ++....++++.+|||++.|...+...+.+.+.+..+.
T Consensus 92 v~~vl-~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~ 133 (480)
T 2zyd_A 92 TDAAI-DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFN 133 (480)
T ss_dssp HHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCC
Confidence 77777 4567789999999999999988888898888876665
No 67
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.42 E-value=3.1e-13 Score=114.79 Aligned_cols=112 Identities=19% Similarity=0.283 Sum_probs=92.2
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcch--HHH
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD--KDR 114 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~--~~~ 114 (221)
++|+|||+|.||..+++.|...|++|.+||+++...+.+.+.|+....+++++++++|+|++|+|....+..++. ++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l 85 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 85 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchH
Confidence 589999999999999999999999999999976544555555777778899999999999999996655665553 345
Q ss_pred HhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 115 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 115 ~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
...++++++||+++.+...+.+.+.+.+.+..+.
T Consensus 86 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~ 119 (299)
T 1vpd_A 86 IEGAKPGTVLIDMSSIAPLASREISDALKAKGVE 119 (299)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 5778999999999999887788898888875554
No 68
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=99.41 E-value=8e-13 Score=115.55 Aligned_cols=108 Identities=21% Similarity=0.259 Sum_probs=90.8
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcC-CCCEEEEeCCCChhhhhcch
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLP-KCDIVVVNTPLTEKTRGMFD 111 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~-~aDvVv~~~p~~~~t~~~i~ 111 (221)
+|.||||+|+|+|+||+.+|+.++.+|++|+++|++....+..+..+++.+ +.++++. +||+++.| .+.+.|+
T Consensus 172 ~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v-~~~ell~~~~DIliP~-----A~~~~I~ 245 (355)
T 1c1d_A 172 SLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPC-----AMGGVIT 245 (355)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEEC-----SCSCCBC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEe-ChHHhhcCccceecHh-----HHHhhcC
Confidence 799999999999999999999999999999999986432334455677665 6788887 89999854 4678899
Q ss_pred HHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 112 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 112 ~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
.+.++.|| ..+|+|.+++.+.++++ .+.|+++++.
T Consensus 246 ~~~~~~lk-~~iVie~AN~p~t~~eA-~~~L~~~gIl 280 (355)
T 1c1d_A 246 TEVARTLD-CSVVAGAANNVIADEAA-SDILHARGIL 280 (355)
T ss_dssp HHHHHHCC-CSEECCSCTTCBCSHHH-HHHHHHTTCE
T ss_pred HHHHhhCC-CCEEEECCCCCCCCHHH-HHHHHhCCEE
Confidence 99999998 78999999999999777 5889988776
No 69
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.40 E-value=4.2e-13 Score=114.04 Aligned_cols=112 Identities=17% Similarity=0.224 Sum_probs=91.7
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcch--HHH
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD--KDR 114 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~--~~~ 114 (221)
++|+|||+|.||+.+++.|...|++|.+||+++...+...+.|+....+++++++++|+|++|+|....+..++. .+.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 84 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGV 84 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchH
Confidence 689999999999999999999999999999976444444445777777899999999999999996666666664 356
Q ss_pred HhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 115 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 115 ~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
...++++++||+++.|...+.+.+.+.+.+..+.
T Consensus 85 ~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~ 118 (301)
T 3cky_A 85 LSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGID 118 (301)
T ss_dssp HHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 6778999999999998877788888888775444
No 70
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.40 E-value=4.9e-13 Score=113.23 Aligned_cols=111 Identities=15% Similarity=0.119 Sum_probs=90.7
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchH--HH
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK--DR 114 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~--~~ 114 (221)
++|+|||+|.||+.+|+.|...|++|.+|| ++...+.+.+.|+....+++++++++|+|++|+|....+..++.. +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 82 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGC 82 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhH
Confidence 589999999999999999999999999999 776666555557776778999999999999999965555555532 44
Q ss_pred HhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 115 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 115 ~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
...++++++||+++.+...+.+.+.+.+.+..+.
T Consensus 83 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~ 116 (295)
T 1yb4_A 83 AKTSLQGKTIVDMSSISPIETKRFAQRVNEMGAD 116 (295)
T ss_dssp TTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 5678899999999999878888899988875444
No 71
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.39 E-value=4.1e-12 Score=106.84 Aligned_cols=138 Identities=16% Similarity=0.150 Sum_probs=95.0
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCce--ecCCHHhhcCCCCEEEEeCCCChhhhhcchHHH
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAK--FEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDR 114 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~--~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~ 114 (221)
++|+|||+|.||+.+++.|...|++|.+||+++...+.+.+.|+. ...+++++ +++|+|++++|. ..+..++ .+.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~-~~~~~~~-~~l 77 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPI-QLILPTL-EKL 77 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCH-HHHHHHH-HHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCH-HHHHHHH-HHH
Confidence 589999999999999999999999999999876444444555652 35678888 999999999993 3344444 355
Q ss_pred HhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCC---CCCCCCCCCCCCCCeEECCCCCc
Q 027577 115 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNP---QPAPKDHPWRYMPNQAMTPHVSG 180 (221)
Q Consensus 115 ~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~---ep~~~~~~l~~~~n~~~tPH~a~ 180 (221)
...++++++||+++.......+.+.+.+. ++.+ ..-++.. .|....+.++.-+.++++|+-++
T Consensus 78 ~~~~~~~~~vv~~~~~~~~~~~~~~~~~~--~~~~-~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~ 143 (279)
T 2f1k_A 78 IPHLSPTAIVTDVASVKTAIAEPASQLWS--GFIG-GHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYT 143 (279)
T ss_dssp GGGSCTTCEEEECCSCCHHHHHHHHHHST--TCEE-EEECCCCSCSSGGGCCTTTTTTCEEEEEECTTC
T ss_pred HhhCCCCCEEEECCCCcHHHHHHHHHHhC--CEee-cCcccCCccCCHHHHhHHHhCCCcEEEecCCCC
Confidence 66789999999997766555555555443 2221 2233321 23333445666667888997654
No 72
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.39 E-value=1.2e-12 Score=119.44 Aligned_cols=112 Identities=11% Similarity=0.152 Sum_probs=94.2
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh-----cCceecCCHHhhcCC---CCEEEEeCCCChhhh
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-----TGAKFEEDLDTMLPK---CDIVVVNTPLTEKTR 107 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-----~g~~~~~~l~ell~~---aDvVv~~~p~~~~t~ 107 (221)
..+|||||+|.||..+|+.|...|++|.+|||++...+.+.+ .|+....+++++++. +|+|++++|....++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 89 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVD 89 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHH
Confidence 568999999999999999999999999999998755554444 467767789998876 999999999766777
Q ss_pred hcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 108 GMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
.++ ++....+++|.+||+++.+...+...+.+.+.+..+.
T Consensus 90 ~vl-~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~ 129 (497)
T 2p4q_A 90 ALI-NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGIL 129 (497)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHH-HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCc
Confidence 776 4567789999999999999888888898888876555
No 73
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.39 E-value=7.1e-13 Score=117.94 Aligned_cols=102 Identities=20% Similarity=0.266 Sum_probs=83.7
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecC---------------------------C
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEE---------------------------D 85 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~---------------------------~ 85 (221)
++.|++|+|+|+|.||..+++.++.+|++|+++|+++...+.++++|...+. +
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 248 (401)
T 1x13_A 169 KVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL 248 (401)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence 5789999999999999999999999999999999987655556667765432 3
Q ss_pred HHhhcCCCCEEEEe--CCCChhhhhcchHHHHhcCCCCCEEEEcC--CCCccCH
Q 027577 86 LDTMLPKCDIVVVN--TPLTEKTRGMFDKDRIAKMKKGVLIVNNA--RGAIMDT 135 (221)
Q Consensus 86 l~ell~~aDvVv~~--~p~~~~t~~~i~~~~~~~mk~ga~lIn~s--rg~~vd~ 135 (221)
++++++.+|+|+.| +|. ..+..+++++.++.|++|++|||++ ||+.+++
T Consensus 249 l~e~~~~aDvVI~~~~~pg-~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~ 301 (401)
T 1x13_A 249 FAAQAKEVDIIVTTALIPG-KPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEY 301 (401)
T ss_dssp HHHHHHHCSEEEECCCCTT-SCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred HHHHhCCCCEEEECCccCC-CCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCc
Confidence 66778889999999 443 2355778889999999999999999 8876644
No 74
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.38 E-value=7.4e-13 Score=115.44 Aligned_cols=140 Identities=14% Similarity=0.082 Sum_probs=96.6
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcC----CCCEEEEeCCCChhhhhcch
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLP----KCDIVVVNTPLTEKTRGMFD 111 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~----~aDvVv~~~p~~~~t~~~i~ 111 (221)
-++|||||+|.||.++|+.|+..|++|++||+++...+.+.+.|+....+++++++ ++|+|++|+|. ..+..++.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~-~~~~~vl~ 86 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPM-TAIDSLLD 86 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCH-HHHHHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCH-HHHHHHHH
Confidence 36899999999999999999999999999999765556666778876678888776 47999999993 34555552
Q ss_pred HHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEE-eeCCCCC---CCCCCCCCCCCCCeEECCCCCc
Q 027577 112 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYS-GDVWNPQ---PAPKDHPWRYMPNQAMTPHVSG 180 (221)
Q Consensus 112 ~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~-lDV~~~e---p~~~~~~l~~~~n~~~tPH~a~ 180 (221)
+. ..++++++|+|++..+....+++.+.+. ...... --++..| |......|+.-..+++||+-..
T Consensus 87 -~l-~~~~~~~iv~Dv~Svk~~i~~~~~~~~~--~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~~ 155 (341)
T 3ktd_A 87 -AV-HTHAPNNGFTDVVSVKTAVYDAVKARNM--QHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLF 155 (341)
T ss_dssp -HH-HHHCTTCCEEECCSCSHHHHHHHHHTTC--GGGEECEEECCSCC-CCGGGCCSSTTTTCEEEECCGGGT
T ss_pred -HH-HccCCCCEEEEcCCCChHHHHHHHHhCC--CCcEecCCccccccccchhhhhhHHhcCCeEEEEeCCCC
Confidence 33 3358999999998765433334443332 122111 2233332 2224456777778999998543
No 75
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.37 E-value=5.1e-13 Score=113.28 Aligned_cols=109 Identities=16% Similarity=0.231 Sum_probs=87.1
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchH--HH
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK--DR 114 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~--~~ 114 (221)
++|+|||+|.||+.+++.|...|++|.+||+++...+.+.+.|+....+++++++++|+|++|+|....+..++.. ..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~ 80 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGI 80 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSG
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhH
Confidence 4799999999999999999999999999999765555555567777778999999999999999866666665543 24
Q ss_pred HhcCCCCCEEEEcCCCCccCHHHHHHHHHhC
Q 027577 115 IAKMKKGVLIVNNARGAIMDTQAVVDACSSG 145 (221)
Q Consensus 115 ~~~mk~ga~lIn~srg~~vd~~al~~al~~g 145 (221)
+..+++++++|+++...+.+.+.+.+.+.+.
T Consensus 81 ~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~ 111 (296)
T 2gf2_A 81 LKKVKKGSLLIDSSTIDPAVSKELAKEVEKM 111 (296)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHT
T ss_pred HhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 4568899999998777776667777777653
No 76
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.37 E-value=1.3e-12 Score=111.91 Aligned_cols=112 Identities=14% Similarity=0.200 Sum_probs=90.8
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchH--HH
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK--DR 114 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~--~~ 114 (221)
++|+|||+|.||+.+|+.|...|++|.+||+++...+.+.+.|+....+++++++++|+|++|+|....+..++.. ..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~ 110 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGV 110 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhH
Confidence 6899999999999999999999999999999776555555667777778989999999999999965555555533 23
Q ss_pred HhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 115 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 115 ~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
+..++++.+||+++.+.....+.+.+.+....+.
T Consensus 111 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~ 144 (316)
T 2uyy_A 111 LQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGR 144 (316)
T ss_dssp GGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 4678999999999998777778888888665444
No 77
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=99.36 E-value=1.6e-12 Score=114.45 Aligned_cols=95 Identities=19% Similarity=0.252 Sum_probs=79.9
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec-------------------------CCHH
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-------------------------EDLD 87 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-------------------------~~l~ 87 (221)
.+.++||+|||+|.||..+|+.++.+|++|+++|+++...+.+.+.|.+.. .+++
T Consensus 181 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 181 TVKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp EECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence 578999999999999999999999999999999998766666666666533 2467
Q ss_pred hhcCCCCEEEEeC--CCChhhhhcchHHHHhcCCCCCEEEEcC
Q 027577 88 TMLPKCDIVVVNT--PLTEKTRGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 88 ell~~aDvVv~~~--p~~~~t~~~i~~~~~~~mk~ga~lIn~s 128 (221)
+.++++|+|+.++ |. ..+..+++++.++.||+|++|||++
T Consensus 261 e~l~~aDIVI~tv~iPg-~~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 261 DAITKFDIVITTALVPG-RPAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHHTTCSEEEECCCCTT-SCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHhcCCEEEECCCCCC-cccceeecHHHHhcCCCCcEEEEEe
Confidence 8899999999875 43 2345678999999999999999997
No 78
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.36 E-value=9.5e-13 Score=111.02 Aligned_cols=109 Identities=12% Similarity=0.142 Sum_probs=87.0
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHHh
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIA 116 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~ 116 (221)
++|+|||+|.||..+++.|.. |++|.+||+++...+.+.+.|+.... ++++++++|+|++|+|....+..++ ++...
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~D~vi~~v~~~~~~~~v~-~~l~~ 78 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAV-PLERVAEARVIFTCLPTTREVYEVA-EALYP 78 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEEC-CGGGGGGCSEEEECCSSHHHHHHHH-HHHTT
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccC-HHHHHhCCCEEEEeCCChHHHHHHH-HHHHh
Confidence 479999999999999999999 99999999976544444444555554 7788889999999999554455554 45567
Q ss_pred cCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 117 KMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 117 ~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
.+++++++|+++.+...+.+.+.+.+.+..+.
T Consensus 79 ~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~ 110 (289)
T 2cvz_A 79 YLREGTYWVDATSGEPEASRRLAERLREKGVT 110 (289)
T ss_dssp TCCTTEEEEECSCCCHHHHHHHHHHHHTTTEE
T ss_pred hCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 78999999999998888888899988875443
No 79
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.35 E-value=5.7e-13 Score=110.71 Aligned_cols=97 Identities=13% Similarity=0.188 Sum_probs=68.2
Q ss_pred cccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCC--------------hhH-HHhcCceecCCHHhhcCCCC
Q 027577 30 RAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMD--------------PQL-EKETGAKFEEDLDTMLPKCD 94 (221)
Q Consensus 30 ~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~--------------~~~-~~~~g~~~~~~l~ell~~aD 94 (221)
...++.+++|||||+|.||+++|+.|...|++|.+||+++.. .+. ....+.....++++++++||
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD 92 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAE 92 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCS
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCC
Confidence 356899999999999999999999999999999999997532 111 12234444568889999999
Q ss_pred EEEEeCCCChhhhhcchHHH-HhcCCCCCEEEEcCC
Q 027577 95 IVVVNTPLTEKTRGMFDKDR-IAKMKKGVLIVNNAR 129 (221)
Q Consensus 95 vVv~~~p~~~~t~~~i~~~~-~~~mk~ga~lIn~sr 129 (221)
+|++|+|..... ..+. +. ...+ ++++||+++.
T Consensus 93 vVilavp~~~~~-~~~~-~i~~~~l-~g~ivi~~s~ 125 (245)
T 3dtt_A 93 LVVNATEGASSI-AALT-AAGAENL-AGKILVDIAN 125 (245)
T ss_dssp EEEECSCGGGHH-HHHH-HHCHHHH-TTSEEEECCC
T ss_pred EEEEccCcHHHH-HHHH-Hhhhhhc-CCCEEEECCC
Confidence 999999954433 2332 22 2334 7999999993
No 80
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.34 E-value=5e-12 Score=107.95 Aligned_cols=137 Identities=13% Similarity=0.105 Sum_probs=87.6
Q ss_pred HHHHHHHcCCCccCcccCcccCCCCCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhc
Q 027577 12 PGHHQVISGEWNVAGVAYRAYDLEGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTML 90 (221)
Q Consensus 12 ~~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell 90 (221)
....++++..|.... ...++|+||| +|.||.++|+.|+..|++|.++|+++. .+.++++
T Consensus 4 ~~~~~~~~~~~~~~~-------~~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~-------------~~~~~~~ 63 (298)
T 2pv7_A 4 ESYANENQFGFKTIN-------SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW-------------AVAESIL 63 (298)
T ss_dssp ---------CCCCSC-------TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG-------------GGHHHHH
T ss_pred hHHhhhhccCccccC-------CCCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc-------------cCHHHHh
Confidence 344566777795321 1356899999 999999999999999999999998642 1467788
Q ss_pred CCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCCC-CCCCCCCC
Q 027577 91 PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAP-KDHPWRYM 169 (221)
Q Consensus 91 ~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~~-~~~~l~~~ 169 (221)
++||+|++|+|.. .+..++ .+....++++++|++++.......+++.+.+ ... .+. ..|.. +..+++.-
T Consensus 64 ~~aDvVilavp~~-~~~~vl-~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~---~~~--~v~---~hP~~g~~~~~~~g 133 (298)
T 2pv7_A 64 ANADVVIVSVPIN-LTLETI-ERLKPYLTENMLLADLTSVKREPLAKMLEVH---TGA--VLG---LHPMFGADIASMAK 133 (298)
T ss_dssp TTCSEEEECSCGG-GHHHHH-HHHGGGCCTTSEEEECCSCCHHHHHHHHHHC---SSE--EEE---EEECSCTTCSCCTT
T ss_pred cCCCEEEEeCCHH-HHHHHH-HHHHhhcCCCcEEEECCCCCcHHHHHHHHhc---CCC--EEe---eCCCCCCCchhhcC
Confidence 9999999999943 355555 3456678999999999876554344444432 122 222 22321 12245555
Q ss_pred CCeEECCCC
Q 027577 170 PNQAMTPHV 178 (221)
Q Consensus 170 ~n~~~tPH~ 178 (221)
..+++|||-
T Consensus 134 ~~~~l~~~~ 142 (298)
T 2pv7_A 134 QVVVRCDGR 142 (298)
T ss_dssp CEEEEEEEE
T ss_pred CeEEEecCC
Confidence 578899974
No 81
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.33 E-value=2.7e-12 Score=116.39 Aligned_cols=117 Identities=14% Similarity=0.157 Sum_probs=93.1
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhc----CceecCCHHhhcCC---CCEEEEeCCCChhhhhc
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET----GAKFEEDLDTMLPK---CDIVVVNTPLTEKTRGM 109 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~----g~~~~~~l~ell~~---aDvVv~~~p~~~~t~~~ 109 (221)
++|||||+|.||+.+|+.|...|++|.+||+++...+.+.+. ++....+++++++. +|+|++++|....+..+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v 85 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT 85 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence 589999999999999999999999999999976444433332 67777789998776 99999999976666666
Q ss_pred chHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeC
Q 027577 110 FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 154 (221)
Q Consensus 110 i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV 154 (221)
+ ++....+++|.+||+++.+...+...+.+.+.+..+.....-|
T Consensus 86 l-~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv 129 (474)
T 2iz1_A 86 I-KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGV 129 (474)
T ss_dssp H-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEE
T ss_pred H-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCC
Confidence 6 4566788999999999999888888888888776565333333
No 82
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.33 E-value=7.1e-12 Score=110.76 Aligned_cols=99 Identities=22% Similarity=0.300 Sum_probs=81.3
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec--CC-------------------------
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE--ED------------------------- 85 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~--~~------------------------- 85 (221)
++.|++|+|+|+|.+|..+++.++.+|++|+++|+++...+.++++|.... +.
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~ 248 (384)
T 1l7d_A 169 TVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA 248 (384)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence 689999999999999999999999999999999998766666666776543 11
Q ss_pred --HHhhcCCCCEEEEeC--CCChhhhhcchHHHHhcCCCCCEEEEcC--CCCc
Q 027577 86 --LDTMLPKCDIVVVNT--PLTEKTRGMFDKDRIAKMKKGVLIVNNA--RGAI 132 (221)
Q Consensus 86 --l~ell~~aDvVv~~~--p~~~~t~~~i~~~~~~~mk~ga~lIn~s--rg~~ 132 (221)
++++++.+|+|+.|+ |..+ +..++.++.++.||++++|||++ ||+.
T Consensus 249 ~~l~~~~~~aDvVi~~~~~pg~~-~~~li~~~~l~~mk~g~vivdva~~~gg~ 300 (384)
T 1l7d_A 249 EAVLKELVKTDIAITTALIPGKP-APVLITEEMVTKMKPGSVIIDLAVEAGGN 300 (384)
T ss_dssp HHHHHHHTTCSEEEECCCCTTSC-CCCCSCHHHHTTSCTTCEEEETTGGGTCS
T ss_pred HHHHHHhCCCCEEEECCccCCCC-CCeeeCHHHHhcCCCCCEEEEEecCCCCC
Confidence 677889999999887 4332 34678889999999999999999 7653
No 83
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.33 E-value=2.8e-12 Score=116.61 Aligned_cols=117 Identities=12% Similarity=0.124 Sum_probs=93.7
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh-----cCceecCCHHhhc---CCCCEEEEeCCCChhhhh
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-----TGAKFEEDLDTML---PKCDIVVVNTPLTEKTRG 108 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-----~g~~~~~~l~ell---~~aDvVv~~~p~~~~t~~ 108 (221)
++|||||+|.||+.+|..|...|++|.+||+++...+.+.+ .++....++++++ +++|+|++++|....+..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 57999999999999999999999999999997655444444 5676677898887 489999999996666776
Q ss_pred cchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeC
Q 027577 109 MFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 154 (221)
Q Consensus 109 ~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV 154 (221)
++. +....++++.+||+++.+...+...+.+.+.+..+.....-|
T Consensus 83 vl~-~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv 127 (482)
T 2pgd_A 83 FIE-KLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGV 127 (482)
T ss_dssp HHH-HHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHH-HHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCC
Confidence 664 566778999999999999888888888888776555333333
No 84
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=99.33 E-value=4.1e-12 Score=112.71 Aligned_cols=100 Identities=20% Similarity=0.291 Sum_probs=81.7
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec-----------------------------
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----------------------------- 83 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~----------------------------- 83 (221)
.+.+.||+|+|+|.||..+++.++.+|++|+++|+++...+.+++.|....
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~ 266 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA 266 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHH
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence 478999999999999999999999999999999998766566666665421
Q ss_pred CCHHhhcCCCCEEEEeC--CCChhhhhcchHHHHhcCCCCCEEEEcC--CCCcc
Q 027577 84 EDLDTMLPKCDIVVVNT--PLTEKTRGMFDKDRIAKMKKGVLIVNNA--RGAIM 133 (221)
Q Consensus 84 ~~l~ell~~aDvVv~~~--p~~~~t~~~i~~~~~~~mk~ga~lIn~s--rg~~v 133 (221)
.+++++++++|+||.++ |.. ....+++++.++.||+|++|||+| +|+.+
T Consensus 267 ~~l~e~l~~aDVVI~tvlipg~-~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~ 319 (405)
T 4dio_A 267 ALVAEHIAKQDIVITTALIPGR-PAPRLVTREMLDSMKPGSVVVDLAVERGGNI 319 (405)
T ss_dssp HHHHHHHHTCSEEEECCCCSSS-CCCCCBCHHHHTTSCTTCEEEETTGGGTCSB
T ss_pred hHHHHHhcCCCEEEECCcCCCC-CCCEEecHHHHhcCCCCCEEEEEeCCCCCCc
Confidence 15678889999999875 432 356678999999999999999998 55544
No 85
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.29 E-value=3.7e-12 Score=110.73 Aligned_cols=137 Identities=18% Similarity=0.187 Sum_probs=94.3
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCC-hhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcch
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMD-PQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 111 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~ 111 (221)
.+.+++|+|||+|.||+++|+.|+..|++|++++++... .+.+.+.|+... ++++++++||+|++|+|... ...++.
T Consensus 13 ~l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~-~~~e~~~~aDvVilavp~~~-~~~v~~ 90 (338)
T 1np3_A 13 IIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA-DVKTAVAAADVVMILTPDEF-QGRLYK 90 (338)
T ss_dssp HHHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE-CHHHHHHTCSEEEECSCHHH-HHHHHH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc-cHHHHHhcCCEEEEeCCcHH-HHHHHH
Confidence 578999999999999999999999999999999987643 345556787765 88899999999999999432 344444
Q ss_pred HHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCC---CCC---CCCeEECCCCCc
Q 027577 112 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHP---WRY---MPNQAMTPHVSG 180 (221)
Q Consensus 112 ~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~~~~~~---l~~---~~n~~~tPH~a~ 180 (221)
.+....++++++|++++ | +.. ..+.+. ....+||+...|..+.+. ++. -.++++|||-..
T Consensus 91 ~~i~~~l~~~~ivi~~~-g--v~~--~~~~~~----~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~ii~~~~~~ 156 (338)
T 1np3_A 91 EEIEPNLKKGATLAFAH-G--FSI--HYNQVV----PRADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQDA 156 (338)
T ss_dssp HHTGGGCCTTCEEEESC-C--HHH--HTTSSC----CCTTCEEEEEEESSCSHHHHHHHHTTCCCCEEEEEEECS
T ss_pred HHHHhhCCCCCEEEEcC-C--chh--HHHhhc----CCCCcEEEeccCCCCchhHHHHHhccCCCeEEEEecCCC
Confidence 35566799999999874 3 222 222111 112344554455333322 222 456888998643
No 86
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.29 E-value=6.6e-12 Score=114.02 Aligned_cols=117 Identities=14% Similarity=0.140 Sum_probs=91.8
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh-cC-------ceecCCHHhhcC---CCCEEEEeCCCChh
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-TG-------AKFEEDLDTMLP---KCDIVVVNTPLTEK 105 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-~g-------~~~~~~l~ell~---~aDvVv~~~p~~~~ 105 (221)
++|||||+|.||+.+|..|...|++|.+||+++...+.+.+ .| +....+++++++ .+|+|++++|....
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~ 81 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence 47999999999999999999999999999997544333332 24 556678888876 59999999997666
Q ss_pred hhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeC
Q 027577 106 TRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 154 (221)
Q Consensus 106 t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV 154 (221)
+..++ ++....++++.+||+++.|...+...+.+.+.+..+.....-|
T Consensus 82 v~~vl-~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv 129 (478)
T 1pgj_A 82 TDSTI-EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGI 129 (478)
T ss_dssp HHHHH-HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHH-HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeec
Confidence 66666 4566778999999999999888888888888876655333333
No 87
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.28 E-value=2.7e-11 Score=104.68 Aligned_cols=133 Identities=12% Similarity=0.077 Sum_probs=93.7
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHH-----------hcC--------------ceecCCHHhhc
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-----------ETG--------------AKFEEDLDTML 90 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-----------~~g--------------~~~~~~l~ell 90 (221)
-++|+|||+|.||.++|..+...|++|.+||+++...+.+. +.| +....++++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav 85 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHH
Confidence 46899999999999999999999999999999764333221 112 34567899999
Q ss_pred CCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCCC
Q 027577 91 PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMP 170 (221)
Q Consensus 91 ~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~~~~~~l~~~~ 170 (221)
++||+|+.|+|.+.+.+..+-.+....++++++|++.+.+ +....+.+.+.. .....++..+. |.. ..+
T Consensus 86 ~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~--i~~~~la~~~~~-~~r~ig~Hp~~--P~~------~~~ 154 (319)
T 2dpo_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVN--PPY------YIP 154 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECS--STT------TCC
T ss_pred hcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCC--hHHHHHHHhcCC-CCCeEEeecCC--chh------hcc
Confidence 9999999999977666555556677889999999876665 455666666643 23334555443 322 223
Q ss_pred CeEECCCCC
Q 027577 171 NQAMTPHVS 179 (221)
Q Consensus 171 n~~~tPH~a 179 (221)
-+.++|+-.
T Consensus 155 lveiv~g~~ 163 (319)
T 2dpo_A 155 LVELVPHPE 163 (319)
T ss_dssp EEEEEECTT
T ss_pred eEEEeCCCC
Confidence 466677644
No 88
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.27 E-value=6.2e-12 Score=105.15 Aligned_cols=100 Identities=15% Similarity=0.233 Sum_probs=78.5
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCCe-EEEEcCCCCChhHHH-hcCceecCCHHhhcCCCCEEEEeCCCChhhhhcc
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCN-LLYHDRVKMDPQLEK-ETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF 110 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~-V~~~d~~~~~~~~~~-~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i 110 (221)
++.+++|+|||+|.||+.+++.+...|++ |.+||+++...+.+. ..++....+++++++++|+|++++|.. ....++
T Consensus 7 ~~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~-~~~~v~ 85 (266)
T 3d1l_A 7 SIEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDS-AFAELL 85 (266)
T ss_dssp CGGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHH-HHHHHH
T ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHH-HHHHHH
Confidence 45678999999999999999999988998 899998754433333 347777778999999999999999943 333333
Q ss_pred hHHHHhcCCCCCEEEEcCCCCccC
Q 027577 111 DKDRIAKMKKGVLIVNNARGAIMD 134 (221)
Q Consensus 111 ~~~~~~~mk~ga~lIn~srg~~vd 134 (221)
++....+++++++|+++.|...+
T Consensus 86 -~~l~~~~~~~~ivv~~s~~~~~~ 108 (266)
T 3d1l_A 86 -QGIVEGKREEALMVHTAGSIPMN 108 (266)
T ss_dssp -HHHHTTCCTTCEEEECCTTSCGG
T ss_pred -HHHHhhcCCCcEEEECCCCCchH
Confidence 34556788999999999987654
No 89
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.26 E-value=5.3e-12 Score=105.34 Aligned_cols=103 Identities=13% Similarity=0.165 Sum_probs=79.1
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCC--CCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHH
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRV--KMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDR 114 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~--~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~ 114 (221)
++|||||+|.||..+|+.|...|++|+++|+. +...+.+.+.|+. .+++++++++|+|++|+|.......+ .+.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~aDvvi~~v~~~~~~~~~--~~~ 76 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT--ETSEEDVYSCPVVISAVTPGVALGAA--RRA 76 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE--ECCHHHHHTSSEEEECSCGGGHHHHH--HHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc--CCHHHHHhcCCEEEEECCCHHHHHHH--HHH
Confidence 58999999999999999999999999999872 2222333345666 57888899999999999965444443 355
Q ss_pred HhcCCCCCEEEEcCCCCccCHHHHHHHHHhC
Q 027577 115 IAKMKKGVLIVNNARGAIMDTQAVVDACSSG 145 (221)
Q Consensus 115 ~~~mk~ga~lIn~srg~~vd~~al~~al~~g 145 (221)
...+++ ++|+++.+...+.+.+.+.+.+.
T Consensus 77 ~~~~~~--~vi~~s~~~~~~~~~l~~~~~~~ 105 (264)
T 1i36_A 77 GRHVRG--IYVDINNISPETVRMASSLIEKG 105 (264)
T ss_dssp HTTCCS--EEEECSCCCHHHHHHHHHHCSSS
T ss_pred HHhcCc--EEEEccCCCHHHHHHHHHHHhhC
Confidence 666776 99999888777777888887653
No 90
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=99.23 E-value=2.6e-11 Score=109.68 Aligned_cols=96 Identities=20% Similarity=0.267 Sum_probs=80.7
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcc
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF 110 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i 110 (221)
+..|.||+++|+|+|.||+.+|+.|+++|++|+++|+++.....+...++.. .+++++++.+|+|+.+.. +.+++
T Consensus 260 g~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv-~~lee~~~~aDvVi~atG----~~~vl 334 (488)
T 3ond_A 260 DVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQV-LTLEDVVSEADIFVTTTG----NKDII 334 (488)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCGGGTTTTCSEEEECSS----CSCSB
T ss_pred CCcccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCcc-CCHHHHHHhcCEEEeCCC----Chhhh
Confidence 3569999999999999999999999999999999998754444444556654 488999999999997654 45678
Q ss_pred hHHHHhcCCCCCEEEEcCCCC
Q 027577 111 DKDRIAKMKKGVLIVNNARGA 131 (221)
Q Consensus 111 ~~~~~~~mk~ga~lIn~srg~ 131 (221)
..+.+..||++++|+|++++.
T Consensus 335 ~~e~l~~mk~gaiVvNaG~~~ 355 (488)
T 3ond_A 335 MLDHMKKMKNNAIVCNIGHFD 355 (488)
T ss_dssp CHHHHTTSCTTEEEEESSSTT
T ss_pred hHHHHHhcCCCeEEEEcCCCC
Confidence 888999999999999999983
No 91
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.23 E-value=4.4e-11 Score=102.12 Aligned_cols=130 Identities=14% Similarity=0.176 Sum_probs=90.1
Q ss_pred CCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhc-------CceecCCHHhhcCCCCEEEEeCCCChhh
Q 027577 34 LEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET-------GAKFEEDLDTMLPKCDIVVVNTPLTEKT 106 (221)
Q Consensus 34 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~-------g~~~~~~l~ell~~aDvVv~~~p~~~~t 106 (221)
-..|+|||||+|.||..+|..+. .|++|++||+++...+.+.+. ++....++++ +++||+|+.|+|.+.+.
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~v 87 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNT 87 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHH
Confidence 45789999999999999999999 999999999976544444443 5666667876 89999999999988876
Q ss_pred hhcchHHHHhcCCCCCEEE-EcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCCCCeEECCCCC
Q 027577 107 RGMFDKDRIAKMKKGVLIV-NNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVS 179 (221)
Q Consensus 107 ~~~i~~~~~~~mk~ga~lI-n~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~~~~~~l~~~~n~~~tPH~a 179 (221)
+..+-.+ ++.+ ++++++ |+|.-. ...+.+.+. ......++..|. |.+ ..+-+.++|+-.
T Consensus 88 k~~l~~~-l~~~-~~~IlasntSti~---~~~~a~~~~-~~~r~~G~Hf~~--Pv~------~~~lveiv~g~~ 147 (293)
T 1zej_A 88 KVEVLRE-VERL-TNAPLCSNTSVIS---VDDIAERLD-SPSRFLGVHWMN--PPH------VMPLVEIVISRF 147 (293)
T ss_dssp HHHHHHH-HHTT-CCSCEEECCSSSC---HHHHHTTSS-CGGGEEEEEECS--STT------TCCEEEEEECTT
T ss_pred HHHHHHH-HhcC-CCCEEEEECCCcC---HHHHHHHhh-cccceEeEEecC--ccc------cCCEEEEECCCC
Confidence 6665444 5566 999885 776643 345544443 223345666554 432 234566666544
No 92
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.87 E-value=9.1e-13 Score=106.65 Aligned_cols=94 Identities=16% Similarity=0.198 Sum_probs=74.7
Q ss_pred CCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchHH
Q 027577 34 LEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKD 113 (221)
Q Consensus 34 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~ 113 (221)
+.+++|+|||+|+||+.+|+.|...|++|.+|+|++. .+.+...++... +++++++++|+|++++|.. .+..++ +
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~g~~~~-~~~~~~~~aDvVilav~~~-~~~~v~--~ 91 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLLPRGAEVL-CYSEAASRSDVIVLAVHRE-HYDFLA--E 91 (201)
Confidence 6788999999999999999999999999999998764 333333455544 7888899999999999953 455555 2
Q ss_pred HHhcCCCCCEEEEcCCCCcc
Q 027577 114 RIAKMKKGVLIVNNARGAIM 133 (221)
Q Consensus 114 ~~~~mk~ga~lIn~srg~~v 133 (221)
+..++++++|||+++|-..
T Consensus 92 -l~~~~~~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 92 -LADSLKGRVLIDVSNNQKM 110 (201)
Confidence 3446789999999999754
No 93
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.22 E-value=1.1e-11 Score=111.80 Aligned_cols=97 Identities=16% Similarity=0.230 Sum_probs=77.2
Q ss_pred ccCCCC-CEEEEEccCHHHHHHHHHHccC------CCeEEEEcCC-CCChhHHHhcCcee----cCCHHhhcCCCCEEEE
Q 027577 31 AYDLEG-KTVGTVGCGRIGKLLLQRLKPF------NCNLLYHDRV-KMDPQLEKETGAKF----EEDLDTMLPKCDIVVV 98 (221)
Q Consensus 31 ~~~l~g-~~vgIIG~G~iG~~iA~~l~~~------G~~V~~~d~~-~~~~~~~~~~g~~~----~~~l~ell~~aDvVv~ 98 (221)
...|.| |||||||+|+||.++|+.|+.. |++|++.+++ ....+.+.+.|+.. ..++++++++||+|++
T Consensus 48 ~~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVIL 127 (525)
T 3fr7_A 48 PEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLL 127 (525)
T ss_dssp HHHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEE
T ss_pred hHHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEE
Confidence 356899 9999999999999999999988 9998766554 44556666778764 2578999999999999
Q ss_pred eCCCChhhhhcchHHHHhcCCCCCEEEEcCCC
Q 027577 99 NTPLTEKTRGMFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 99 ~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg 130 (221)
++|..... .++. +.+..|++|++ |..+.|
T Consensus 128 aVP~~~~~-eVl~-eI~p~LK~GaI-Ls~AaG 156 (525)
T 3fr7_A 128 LISDAAQA-DNYE-KIFSHMKPNSI-LGLSHG 156 (525)
T ss_dssp CSCHHHHH-HHHH-HHHHHSCTTCE-EEESSS
T ss_pred CCChHHHH-HHHH-HHHHhcCCCCe-EEEeCC
Confidence 99965443 4554 68899999998 566677
No 94
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.22 E-value=6.4e-11 Score=100.30 Aligned_cols=105 Identities=14% Similarity=0.166 Sum_probs=81.5
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCC---eEEEEcCCCCChhHHHh-cCceecCCHHhhcCCCCEEEEeCCCChhhhhcch
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNC---NLLYHDRVKMDPQLEKE-TGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 111 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~---~V~~~d~~~~~~~~~~~-~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~ 111 (221)
.++|||||+|+||.++++.+...|+ +|.+||+++...+.+.+ .|+....+..++++++|+|++++|. .....++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p-~~~~~vl- 80 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP-HQIKMVC- 80 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG-GGHHHHH-
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH-HHHHHHH-
Confidence 4789999999999999999999998 89999998755544444 4888777899999999999999983 3333333
Q ss_pred HHHHhc-CCCCCEEEEcCCCCccCHHHHHHHHHh
Q 027577 112 KDRIAK-MKKGVLIVNNARGAIMDTQAVVDACSS 144 (221)
Q Consensus 112 ~~~~~~-mk~ga~lIn~srg~~vd~~al~~al~~ 144 (221)
++.... ++++++||+++.|- ..+.|.+.+..
T Consensus 81 ~~l~~~~l~~~~iiiS~~agi--~~~~l~~~l~~ 112 (280)
T 3tri_A 81 EELKDILSETKILVISLAVGV--TTPLIEKWLGK 112 (280)
T ss_dssp HHHHHHHHTTTCEEEECCTTC--CHHHHHHHHTC
T ss_pred HHHHhhccCCCeEEEEecCCC--CHHHHHHHcCC
Confidence 344445 68888999988774 45677777765
No 95
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.19 E-value=6.9e-11 Score=99.00 Aligned_cols=109 Identities=14% Similarity=0.163 Sum_probs=81.5
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCCh-hHHHhcCceecCCHHhhcCCCCEEEEeCCCCh--hhhh
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDP-QLEKETGAKFEEDLDTMLPKCDIVVVNTPLTE--KTRG 108 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~-~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~--~t~~ 108 (221)
.++.| +++|||+|.||+++++.|...|++|.++||+.... +.++..+.. ..+++++ +++|+|++|+|... .+..
T Consensus 113 ~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~-~~~~~~~-~~~Divi~~tp~~~~~~~~~ 189 (263)
T 2d5c_A 113 IPLKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR-AVPLEKA-REARLLVNATRVGLEDPSAS 189 (263)
T ss_dssp CCCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE-ECCGGGG-GGCSEEEECSSTTTTCTTCC
T ss_pred CCCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc-hhhHhhc-cCCCEEEEccCCCCCCCCCC
Confidence 46889 99999999999999999999999999999975332 233344555 4578888 99999999999652 2223
Q ss_pred cchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 109 MFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 109 ~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
.+. ...++++++++|++.+.. +. .|.+++++..+.
T Consensus 190 ~l~---~~~l~~g~~viD~~~~p~-~t-~l~~~a~~~g~~ 224 (263)
T 2d5c_A 190 PLP---AELFPEEGAAVDLVYRPL-WT-RFLREAKAKGLK 224 (263)
T ss_dssp SSC---GGGSCSSSEEEESCCSSS-SC-HHHHHHHHTTCE
T ss_pred CCC---HHHcCCCCEEEEeecCCc-cc-HHHHHHHHCcCE
Confidence 343 456899999999998743 33 477777765444
No 96
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.19 E-value=9.4e-11 Score=101.06 Aligned_cols=107 Identities=12% Similarity=0.202 Sum_probs=82.2
Q ss_pred CCCCEEEEEccCHHHHHHHHHHccCC----CeEEEEcCCCC--ChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhh
Q 027577 34 LEGKTVGTVGCGRIGKLLLQRLKPFN----CNLLYHDRVKM--DPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTR 107 (221)
Q Consensus 34 l~g~~vgIIG~G~iG~~iA~~l~~~G----~~V~~~d~~~~--~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~ 107 (221)
...++|+|||+|.||..+|..|...| .+|.+|||++. ..+.+.+.|+....+..++++++|+|++|+| .....
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~~ 98 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHIIP 98 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHHH
Confidence 44578999999999999999999888 78999999764 3444556688777788899999999999999 34444
Q ss_pred hcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHh
Q 027577 108 GMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSS 144 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~ 144 (221)
.++ .+....++++++||+++.|- ..+.+.+.+.+
T Consensus 99 ~vl-~~l~~~l~~~~ivvs~s~gi--~~~~l~~~l~~ 132 (322)
T 2izz_A 99 FIL-DEIGADIEDRHIVVSCAAGV--TISSIEKKLSA 132 (322)
T ss_dssp HHH-HHHGGGCCTTCEEEECCTTC--CHHHHHHHHHT
T ss_pred HHH-HHHHhhcCCCCEEEEeCCCC--CHHHHHHHHhh
Confidence 444 34556788899999998764 34566666664
No 97
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.17 E-value=2.6e-11 Score=100.57 Aligned_cols=104 Identities=17% Similarity=0.319 Sum_probs=79.0
Q ss_pred CEEEEEccCHHHHHHHHHHccCCC----eEEEEcCCCCChhHHH-hcCceecCCHHhhcCCCCEEEEeCCCChhhhhcch
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNC----NLLYHDRVKMDPQLEK-ETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 111 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~----~V~~~d~~~~~~~~~~-~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~ 111 (221)
++|+|||+|+||..+++.|...|+ +|.+||+++...+.+. ..|+....+++++++++|+|++|+|. .....++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~-~~~~~v~- 80 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKP-DLYASII- 80 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCT-TTHHHHC-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCH-HHHHHHH-
Confidence 689999999999999999999998 9999999765444443 45888888999999999999999973 3334444
Q ss_pred HHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHh
Q 027577 112 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSS 144 (221)
Q Consensus 112 ~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~ 144 (221)
++....+++++++|++..|- ..+.+.+.+..
T Consensus 81 ~~l~~~l~~~~~vvs~~~gi--~~~~l~~~~~~ 111 (247)
T 3gt0_A 81 NEIKEIIKNDAIIVTIAAGK--SIESTENAFNK 111 (247)
T ss_dssp ---CCSSCTTCEEEECSCCS--CHHHHHHHHCS
T ss_pred HHHHhhcCCCCEEEEecCCC--CHHHHHHHhCC
Confidence 44556688899999877664 45566666654
No 98
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=99.17 E-value=6e-11 Score=100.21 Aligned_cols=110 Identities=14% Similarity=0.223 Sum_probs=80.3
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChh-HHHhcCceecCCHHhhcCCCCEEEEeCCCChh--hhh
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQ-LEKETGAKFEEDLDTMLPKCDIVVVNTPLTEK--TRG 108 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~-~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~--t~~ 108 (221)
.++.|++|+|||+|.||+++++.|...|++|.++||+....+ .++..++....+++++++++|+|++|+|.... +..
T Consensus 125 ~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp~~~~~~~~~ 204 (275)
T 2hk9_A 125 PEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGLKDEDPE 204 (275)
T ss_dssp TTGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEEECSSTTSSTTCCC
T ss_pred CCcCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCCCCCCCCCCC
Confidence 367899999999999999999999999999999999753322 22334666555888899999999999996532 122
Q ss_pred cchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 109 MFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 109 ~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
.++ ...++++++++|++. . ...+.+..++..+.
T Consensus 205 ~i~---~~~l~~g~~viDv~~---~-~t~ll~~a~~~g~~ 237 (275)
T 2hk9_A 205 IFN---YDLIKKDHVVVDIIY---K-ETKLLKKAKEKGAK 237 (275)
T ss_dssp SSC---GGGCCTTSEEEESSS---S-CCHHHHHHHHTTCE
T ss_pred CCC---HHHcCCCCEEEEcCC---C-hHHHHHHHHHCcCE
Confidence 343 456899999999988 2 33455555544333
No 99
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.16 E-value=3.3e-11 Score=109.07 Aligned_cols=110 Identities=12% Similarity=0.202 Sum_probs=83.2
Q ss_pred CEEEEEccCHHHHHHHHHHccC--CCeEEEEcCCCCChhHHH---------------h----cCceecCCHHhhcCCCCE
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF--NCNLLYHDRVKMDPQLEK---------------E----TGAKFEEDLDTMLPKCDI 95 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~---------------~----~g~~~~~~l~ell~~aDv 95 (221)
++|+|||+|.||..+|..|... |++|++||+++...+... . .++....++++.+++||+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aDv 85 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADL 85 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCCE
Confidence 6899999999999999999887 899999998753322211 1 245555688888999999
Q ss_pred EEEeCCCChhhhh-----------c--chHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCC
Q 027577 96 VVVNTPLTEKTRG-----------M--FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGH 146 (221)
Q Consensus 96 Vv~~~p~~~~t~~-----------~--i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~ 146 (221)
|++|+|......+ + ..++....++++++||+.|+..+-..+.+.+.+.+..
T Consensus 86 ViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~ 149 (467)
T 2q3e_A 86 VFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANT 149 (467)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTC
T ss_pred EEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhC
Confidence 9999984333222 1 1234566789999999999988877888888888754
No 100
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.15 E-value=6.2e-11 Score=100.28 Aligned_cols=92 Identities=18% Similarity=0.299 Sum_probs=72.8
Q ss_pred CEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHH
Q 027577 37 KTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRI 115 (221)
Q Consensus 37 ~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~ 115 (221)
++|+|||+ |.||+.+|+.|...|++|.+||+++...+.+.+.|+... +..++++++|+|++++|... +..++ ++..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~aDvVi~av~~~~-~~~v~-~~l~ 88 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLT-DGDGWIDEADVVVLALPDNI-IEKVA-EDIV 88 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCC-CSSGGGGTCSEEEECSCHHH-HHHHH-HHHG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcC-CHHHHhcCCCEEEEcCCchH-HHHHH-HHHH
Confidence 69999999 999999999999999999999997544444444565543 67788899999999999432 44444 4556
Q ss_pred hcCCCCCEEEEcCCCC
Q 027577 116 AKMKKGVLIVNNARGA 131 (221)
Q Consensus 116 ~~mk~ga~lIn~srg~ 131 (221)
..++++++||+++.|.
T Consensus 89 ~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 89 PRVRPGTIVLILDAAA 104 (286)
T ss_dssp GGSCTTCEEEESCSHH
T ss_pred HhCCCCCEEEECCCCc
Confidence 6788999999988875
No 101
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.13 E-value=6e-11 Score=96.62 Aligned_cols=95 Identities=15% Similarity=0.194 Sum_probs=71.3
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHH
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDR 114 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~ 114 (221)
..++|+|||+|.||+.+++.|...|++|.++|+++...+.+.+.++... +++++++++|+|++++|. .....++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~~DvVi~av~~-~~~~~v~~--- 101 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT-FQEEAVSSPEVIFVAVFR-EHYSSLCS--- 101 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE-EHHHHTTSCSEEEECSCG-GGSGGGGG---
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee-cHHHHHhCCCEEEECCCh-HHHHHHHH---
Confidence 4579999999999999999999999999999987543333333466654 788899999999999993 34444443
Q ss_pred HhcCCCCCEEEEcCCCCccC
Q 027577 115 IAKMKKGVLIVNNARGAIMD 134 (221)
Q Consensus 115 ~~~mk~ga~lIn~srg~~vd 134 (221)
+..+.+++++|++++|...+
T Consensus 102 l~~~~~~~~vv~~s~g~~~~ 121 (215)
T 2vns_A 102 LSDQLAGKILVDVSNPTEQE 121 (215)
T ss_dssp GHHHHTTCEEEECCCCCHHH
T ss_pred HHHhcCCCEEEEeCCCcccc
Confidence 22223799999999987543
No 102
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=99.13 E-value=1.5e-10 Score=88.16 Aligned_cols=89 Identities=12% Similarity=0.227 Sum_probs=70.2
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChh-HHHhcCce--ecCCHHhhcCCCCEEEEeCCCChhhhhcchH
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQ-LEKETGAK--FEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK 112 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~-~~~~~g~~--~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~ 112 (221)
+++|+|||.|.||+.+++.|...|++|.++|+++...+ .++..+.. ...+++++++++|+|+.++|.. ..++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~---~~~~~~ 97 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSK---TPIVEE 97 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCS---SCSBCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCC---CcEeeH
Confidence 89999999999999999999999999999999754333 34445543 4578899999999999999954 233443
Q ss_pred HHHhcCCCCCEEEEcCCC
Q 027577 113 DRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 113 ~~~~~mk~ga~lIn~srg 130 (221)
+.++++.+++|++..
T Consensus 98 ---~~l~~g~~vid~~~p 112 (144)
T 3oj0_A 98 ---RSLMPGKLFIDLGNP 112 (144)
T ss_dssp ---GGCCTTCEEEECCSS
T ss_pred ---HHcCCCCEEEEccCC
Confidence 457889999998764
No 103
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=99.12 E-value=1.7e-10 Score=101.18 Aligned_cols=108 Identities=22% Similarity=0.277 Sum_probs=83.5
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChh-HHHhcCceecCCHHhhcC-CCCEEEEeCCCChhhhhcc
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQ-LEKETGAKFEEDLDTMLP-KCDIVVVNTPLTEKTRGMF 110 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~-~~~~~g~~~~~~l~ell~-~aDvVv~~~p~~~~t~~~i 110 (221)
+|.||||+|+|+|+||+.+|+.|.++|++|+++|++....+ .+++.+...+ +.++++. +||+++.|. +.+++
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v-~~~~ll~~~~DIvip~a-----~~~~I 243 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-APNAIYGVTCDIFAPCA-----LGAVL 243 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-CGGGTTTCCCSEEEECS-----CSCCB
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE-ChHHHhccCCcEeeccc-----hHHHh
Confidence 69999999999999999999999999999999998653222 3344566655 5667766 899999875 35577
Q ss_pred hHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 111 DKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 111 ~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
+.+.++.|+ ..+|++.+++.+.+++ ..+.|+++.+.
T Consensus 244 ~~~~~~~lg-~~iV~e~An~p~t~~e-a~~~L~~~Gi~ 279 (364)
T 1leh_A 244 NDFTIPQLK-AKVIAGSADNQLKDPR-HGKYLHELGIV 279 (364)
T ss_dssp STTHHHHCC-CSEECCSCSCCBSSHH-HHHHHHHHTCE
T ss_pred CHHHHHhCC-CcEEEeCCCCCcccHH-HHHHHHhCCCE
Confidence 777778884 5788999999888755 45666666554
No 104
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.12 E-value=6.4e-10 Score=94.76 Aligned_cols=117 Identities=15% Similarity=0.105 Sum_probs=80.3
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHH-----------hc------------------CceecCCHH
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-----------ET------------------GAKFEEDLD 87 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-----------~~------------------g~~~~~~l~ 87 (221)
++|+|||+|.||..+|..+...|++|++||+++...+... +. .+....+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 95 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA 95 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCHH
Confidence 6899999999999999999999999999999753322210 11 234456888
Q ss_pred hhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCC
Q 027577 88 TMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWN 156 (221)
Q Consensus 88 ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~ 156 (221)
+.+++||+|++++|...+....+-.+....++++++|+..+.+ +....+.+.+... -...++..+.
T Consensus 96 ~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~--i~~~~l~~~~~~~-~~~~g~h~~~ 161 (302)
T 1f0y_A 96 SVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSS--LQITSIANATTRQ-DRFAGLHFFN 161 (302)
T ss_dssp HHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSS--SCHHHHHTTSSCG-GGEEEEEECS
T ss_pred HhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCC--CCHHHHHHhcCCc-ccEEEEecCC
Confidence 8899999999999966544444444555678889999866555 3345565554321 1234555443
No 105
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.12 E-value=3.1e-10 Score=94.40 Aligned_cols=101 Identities=12% Similarity=0.214 Sum_probs=77.3
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHH-hcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHH
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-ETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRI 115 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~ 115 (221)
++|||||+|.||+.+++.|...|.+|.+||+++...+.+. ..|+....+++++++++|+|++|+| .... .+.+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~-----~~v~ 77 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLF-----ETVL 77 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGH-----HHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhH-----HHHH
Confidence 5899999999999999999999999999999754433333 3477767789999999999999999 3332 3344
Q ss_pred hcCCCCCEEEEcCCCCccCHHHHHHHHHhC
Q 027577 116 AKMKKGVLIVNNARGAIMDTQAVVDACSSG 145 (221)
Q Consensus 116 ~~mk~ga~lIn~srg~~vd~~al~~al~~g 145 (221)
..++++.++|++..|-- .+.+.+.+..+
T Consensus 78 ~~l~~~~~vv~~~~~~~--~~~l~~~~~~~ 105 (259)
T 2ahr_A 78 KPLHFKQPIISMAAGIS--LQRLATFVGQD 105 (259)
T ss_dssp TTSCCCSCEEECCTTCC--HHHHHHHHCTT
T ss_pred HHhccCCEEEEeCCCCC--HHHHHHhcCCC
Confidence 55678999999976643 45566666544
No 106
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.11 E-value=3.2e-10 Score=101.52 Aligned_cols=115 Identities=13% Similarity=0.123 Sum_probs=85.3
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh------------------cCceecCCHHhhcCC
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE------------------TGAKFEEDLDTMLPK 92 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~------------------~g~~~~~~l~ell~~ 92 (221)
+++..-++|+|||+|.||..+|..|.. |++|++||+++...+...+ .++....++++++++
T Consensus 31 ~r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~ 109 (432)
T 3pid_A 31 GRGSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRN 109 (432)
T ss_dssp ----CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTT
T ss_pred ccccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhC
Confidence 456667899999999999999999988 9999999997643332222 135566788999999
Q ss_pred CCEEEEeCCCChh-------hhhcc--hHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCc
Q 027577 93 CDIVVVNTPLTEK-------TRGMF--DKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHI 147 (221)
Q Consensus 93 aDvVv~~~p~~~~-------t~~~i--~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i 147 (221)
||+|++|+|...+ +..+. .+.... +++++++|+.|...+-..+.+.+.+.+..+
T Consensus 110 aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v 172 (432)
T 3pid_A 110 ADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNV 172 (432)
T ss_dssp CSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCE
T ss_pred CCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccE
Confidence 9999999995421 11221 244556 899999999999888888889888876544
No 107
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.10 E-value=2.7e-10 Score=92.34 Aligned_cols=80 Identities=14% Similarity=0.243 Sum_probs=62.3
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcch
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 111 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~ 111 (221)
.++..++|+|||+|.||..+|+.|...|++|.+||+++. .++++|+|++++| +..+..++.
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~------------------~~~~aD~vi~av~-~~~~~~v~~ 75 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ------------------ATTLGEIVIMAVP-YPALAALAK 75 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC------------------CSSCCSEEEECSC-HHHHHHHHH
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH------------------HhccCCEEEEcCC-cHHHHHHHH
Confidence 468899999999999999999999999999999998643 4678999999999 555555553
Q ss_pred HHHHhcCCCCCEEEEcCCCCc
Q 027577 112 KDRIAKMKKGVLIVNNARGAI 132 (221)
Q Consensus 112 ~~~~~~mk~ga~lIn~srg~~ 132 (221)
+....++ ++++|++++|-.
T Consensus 76 -~l~~~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 76 -QYATQLK-GKIVVDITNPLN 94 (209)
T ss_dssp -HTHHHHT-TSEEEECCCCBC
T ss_pred -HHHHhcC-CCEEEEECCCCC
Confidence 3344567 999999999754
No 108
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=99.09 E-value=1.5e-10 Score=99.52 Aligned_cols=111 Identities=12% Similarity=0.091 Sum_probs=81.1
Q ss_pred CCCCEEEEEccCHHHHHHHHHHcc-CCC-eEEEEcCCCCChhHH-HhcC--ceecCCHHhhcCCCCEEEEeCCCChhhhh
Q 027577 34 LEGKTVGTVGCGRIGKLLLQRLKP-FNC-NLLYHDRVKMDPQLE-KETG--AKFEEDLDTMLPKCDIVVVNTPLTEKTRG 108 (221)
Q Consensus 34 l~g~~vgIIG~G~iG~~iA~~l~~-~G~-~V~~~d~~~~~~~~~-~~~g--~~~~~~l~ell~~aDvVv~~~p~~~~t~~ 108 (221)
...++|||||+|.||+.+++.+.. +|+ +|.+||+++...+.+ +..+ +..+.+++++++++|+|++|+|.. ..
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~---~~ 209 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLAT---EP 209 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCS---SC
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCC---Cc
Confidence 457899999999999999999865 477 899999976443333 3335 666789999999999999999943 44
Q ss_pred cchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEee
Q 027577 109 MFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGD 153 (221)
Q Consensus 109 ~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lD 153 (221)
++.. ..+++|++|++++....-. ..+.+.+.+... ..+|
T Consensus 210 v~~~---~~l~~g~~vi~~g~~~p~~-~el~~~~~~~g~--~~vD 248 (312)
T 2i99_A 210 ILFG---EWVKPGAHINAVGASRPDW-RELDDELMKEAV--LYVD 248 (312)
T ss_dssp CBCG---GGSCTTCEEEECCCCSTTC-CSBCHHHHHHSE--EEES
T ss_pred ccCH---HHcCCCcEEEeCCCCCCCc-eeccHHHHhcCE--EEEC
Confidence 5544 5689999999998766532 444444433333 3677
No 109
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.08 E-value=9.3e-10 Score=99.02 Aligned_cols=109 Identities=14% Similarity=0.185 Sum_probs=83.5
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh--------------------cCceecCCHHhhcCCCCE
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE--------------------TGAKFEEDLDTMLPKCDI 95 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~--------------------~g~~~~~~l~ell~~aDv 95 (221)
.-+|+|||+|.||..+|..|...|++|++||+++...+...+ .++...+++++.+++||+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDv 87 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADA 87 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSE
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCE
Confidence 458999999999999999999999999999998765544332 124556789899999999
Q ss_pred EEEeCCCChh----------hhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhC
Q 027577 96 VVVNTPLTEK----------TRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 145 (221)
Q Consensus 96 Vv~~~p~~~~----------t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g 145 (221)
|++|+|.... .+.. -+.....+++++++|+.|.-.+-..+.+.+.+.+.
T Consensus 88 vii~Vptp~~~~~~~~Dl~~v~~v-~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~ 146 (446)
T 4a7p_A 88 VFIAVGTPSRRGDGHADLSYVFAA-AREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEV 146 (446)
T ss_dssp EEECCCCCBCTTTCCBCTHHHHHH-HHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHH
T ss_pred EEEEcCCCCccccCCccHHHHHHH-HHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHh
Confidence 9999883321 2222 24567789999999999976666667777777653
No 110
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.07 E-value=3.4e-09 Score=95.58 Aligned_cols=131 Identities=16% Similarity=0.148 Sum_probs=90.5
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCCh--------hHHHhcC-------------ceecCCHHhhcCCCCE
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDP--------QLEKETG-------------AKFEEDLDTMLPKCDI 95 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~--------~~~~~~g-------------~~~~~~l~ell~~aDv 95 (221)
++|+|||+|.||..+|..+...|++|++||+++... +.+.+.| +....+++ .+++||+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~aDl 133 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSNCDL 133 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHccCCE
Confidence 689999999999999999999999999999975411 0111112 23456775 6899999
Q ss_pred EEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCCCCeEEC
Q 027577 96 VVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMT 175 (221)
Q Consensus 96 Vv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~~~~~~l~~~~n~~~t 175 (221)
||.++|.+.+.+..+-.+..+.++++++|++.+.+ +....+.+.+.. .-...++..|. |.+ ..+-+.++
T Consensus 134 VIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSs--l~i~~ia~~~~~-p~r~iG~Hffn--Pv~------~m~LvEIv 202 (460)
T 3k6j_A 134 IVESVIEDMKLKKELFANLENICKSTCIFGTNTSS--LDLNEISSVLRD-PSNLVGIHFFN--PAN------VIRLVEII 202 (460)
T ss_dssp EEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS--SCHHHHHTTSSS-GGGEEEEECCS--STT------TCCEEEEE
T ss_pred EEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCC--hhHHHHHHhccC-CcceEEEEecc--hhh------hCCEEEEE
Confidence 99999977766665656777889999999755444 445666665543 23456777665 432 22335566
Q ss_pred CCCC
Q 027577 176 PHVS 179 (221)
Q Consensus 176 PH~a 179 (221)
|+-.
T Consensus 203 ~g~~ 206 (460)
T 3k6j_A 203 YGSH 206 (460)
T ss_dssp CCSS
T ss_pred eCCC
Confidence 6543
No 111
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.05 E-value=2.1e-10 Score=95.47 Aligned_cols=100 Identities=12% Similarity=0.177 Sum_probs=74.2
Q ss_pred CEEEEEccCHHHHHHHHHHccCC-CeEEEEcCCCCChhHHHh-cCceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHH
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFN-CNLLYHDRVKMDPQLEKE-TGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDR 114 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G-~~V~~~d~~~~~~~~~~~-~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~ 114 (221)
++|+|||+|.||..+|+.|...| ++|.+||+++...+.+.+ .|+....++++++ ++|+|++++| ......++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~~v~---- 74 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDMEAAC---- 74 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHHHHH----
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHHHHH----
Confidence 58999999999999999999889 999999997544443333 4777667788888 9999999999 44443333
Q ss_pred HhcCC-CCCEEEEcCCCCccCHHHHHHHHHhC
Q 027577 115 IAKMK-KGVLIVNNARGAIMDTQAVVDACSSG 145 (221)
Q Consensus 115 ~~~mk-~ga~lIn~srg~~vd~~al~~al~~g 145 (221)
..+. ++++||+++.|-- .+.+.+.+..+
T Consensus 75 -~~l~~~~~ivv~~~~g~~--~~~l~~~~~~~ 103 (263)
T 1yqg_A 75 -KNIRTNGALVLSVAAGLS--VGTLSRYLGGT 103 (263)
T ss_dssp -TTCCCTTCEEEECCTTCC--HHHHHHHTTSC
T ss_pred -HHhccCCCEEEEecCCCC--HHHHHHHcCCC
Confidence 3332 2899999966543 36677776653
No 112
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.05 E-value=3.2e-10 Score=101.62 Aligned_cols=107 Identities=12% Similarity=0.114 Sum_probs=79.8
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh-------------------cC-ceecCCHHhhcCCCCEE
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-------------------TG-AKFEEDLDTMLPKCDIV 96 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-------------------~g-~~~~~~l~ell~~aDvV 96 (221)
++|+|||+|.||..+|..|...|++|+++|+++...+...+ .+ +....++++.+++||+|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv 80 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence 58999999999999999999999999999987543333222 22 45566888889999999
Q ss_pred EEeCCCChh---------hhhcchHHHHhcCCC---CCEEEEcCCCCccC-HHHHHHHHHh
Q 027577 97 VVNTPLTEK---------TRGMFDKDRIAKMKK---GVLIVNNARGAIMD-TQAVVDACSS 144 (221)
Q Consensus 97 v~~~p~~~~---------t~~~i~~~~~~~mk~---ga~lIn~srg~~vd-~~al~~al~~ 144 (221)
++|+|.... ....+ ++....+++ +++||+.|...+-. .+.+.+.+.+
T Consensus 81 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~ 140 (436)
T 1mv8_A 81 FICVGTPSKKNGDLDLGYIETVC-REIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIED 140 (436)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHH
T ss_pred EEEcCCCcccCCCcchHHHHHHH-HHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHH
Confidence 999984433 33322 345556788 99999998766655 5667777765
No 113
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.05 E-value=6.2e-10 Score=100.33 Aligned_cols=107 Identities=14% Similarity=0.210 Sum_probs=80.6
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh--------------------cCceecCCHHhhcCCCCEE
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE--------------------TGAKFEEDLDTMLPKCDIV 96 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~--------------------~g~~~~~~l~ell~~aDvV 96 (221)
++|+|||+|.||..+|..|...|++|++||+++...+...+ .++...+++++++++||+|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvV 82 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADII 82 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEE
Confidence 69999999999999999999999999999997543332222 1244557889999999999
Q ss_pred EEeCCCCh---------hhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHh
Q 027577 97 VVNTPLTE---------KTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSS 144 (221)
Q Consensus 97 v~~~p~~~---------~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~ 144 (221)
++|+|... ..... -++....+++++++|+.|.-.+-..+.+.+.+.+
T Consensus 83 iiaVptp~~~~~~~dl~~v~~v-~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 83 FIAVGTPAGEDGSADMSYVLDA-ARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp EECCCCCBCTTSSBCCHHHHHH-HHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCcccCCCcChHHHHHH-HHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 99998442 22322 2456677899999999997655556666666654
No 114
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.05 E-value=4.1e-10 Score=98.56 Aligned_cols=98 Identities=13% Similarity=0.069 Sum_probs=75.0
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcC--------------ceecCCHHhhcCCCCEEEEeC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG--------------AKFEEDLDTMLPKCDIVVVNT 100 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g--------------~~~~~~l~ell~~aDvVv~~~ 100 (221)
..++|+|||.|.||..+|..|...|++|.+|++++...+...+.+ +....+++++++++|+|++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaV 107 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVV 107 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECC
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECC
Confidence 357899999999999999999999999999999754333333322 334568889999999999999
Q ss_pred CCChhhhhcchHHHHhcCCCCCEEEEcCCCCccC
Q 027577 101 PLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMD 134 (221)
Q Consensus 101 p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd 134 (221)
|. ...+.++ ++....+++++++|+++.|-..+
T Consensus 108 p~-~~~~~vl-~~i~~~l~~~~ivvs~~kGi~~~ 139 (356)
T 3k96_A 108 PS-FAFHEVI-TRMKPLIDAKTRIAWGTKGLAKG 139 (356)
T ss_dssp CH-HHHHHHH-HHHGGGCCTTCEEEECCCSCBTT
T ss_pred CH-HHHHHHH-HHHHHhcCCCCEEEEEeCCCCcC
Confidence 93 3333333 45666788999999999876554
No 115
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.00 E-value=1.8e-09 Score=93.39 Aligned_cols=105 Identities=16% Similarity=0.189 Sum_probs=76.1
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhc-Cc--------------eecCCHHhhcCCCCEEEEeCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET-GA--------------KFEEDLDTMLPKCDIVVVNTP 101 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~-g~--------------~~~~~l~ell~~aDvVv~~~p 101 (221)
++|+|||+|.||..+|..|...|++|.++++++...+...+. +. ....+++++++++|+|++++|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 84 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 84 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCC
Confidence 699999999999999999999999999999875433333332 21 234678888899999999999
Q ss_pred CChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHh
Q 027577 102 LTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSS 144 (221)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~ 144 (221)
... ...++ ++....+++++++|+. .|.......+.+.+..
T Consensus 85 ~~~-~~~~~-~~l~~~l~~~~~vv~~-~~~~~~~~~~~~~l~~ 124 (359)
T 1bg6_A 85 AIH-HASIA-ANIASYISEGQLIILN-PGATGGALEFRKILRE 124 (359)
T ss_dssp GGG-HHHHH-HHHGGGCCTTCEEEES-SCCSSHHHHHHHHHHH
T ss_pred chH-HHHHH-HHHHHhCCCCCEEEEc-CCCchHHHHHHHHHHh
Confidence 443 33333 4566678999999998 4422344445555554
No 116
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=98.99 E-value=9e-10 Score=94.54 Aligned_cols=105 Identities=12% Similarity=0.047 Sum_probs=75.2
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcC--CCCChhHHHhcCc-----------eecC--CHHhhcCCCCEEEEeCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDR--VKMDPQLEKETGA-----------KFEE--DLDTMLPKCDIVVVNTP 101 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~--~~~~~~~~~~~g~-----------~~~~--~l~ell~~aDvVv~~~p 101 (221)
++|+|||+|.||..+|..|...|++|.+|++ ++...+...+.+. .... ++++.++++|+|++++|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence 5899999999999999999988999999998 6543343333332 3344 67788899999999999
Q ss_pred CChhhhhcchHHHHhcCCCCCEEEEcCCCC---c-cCHHHHHHHHHh
Q 027577 102 LTEKTRGMFDKDRIAKMKKGVLIVNNARGA---I-MDTQAVVDACSS 144 (221)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~ga~lIn~srg~---~-vd~~al~~al~~ 144 (221)
.. .+..++ .+... +++++++|+++.|- . -..+.+.+.+.+
T Consensus 81 ~~-~~~~v~-~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~ 124 (335)
T 1txg_A 81 TD-GVLPVM-SRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRL 124 (335)
T ss_dssp GG-GHHHHH-HHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTT
T ss_pred hH-HHHHHH-HHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHH
Confidence 43 444433 34556 88899999998774 1 123445555654
No 117
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.98 E-value=1.2e-09 Score=99.16 Aligned_cols=108 Identities=12% Similarity=0.160 Sum_probs=76.8
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhc--------------------CceecCCHHhhcCCCCE
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET--------------------GAKFEEDLDTMLPKCDI 95 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~--------------------g~~~~~~l~ell~~aDv 95 (221)
.++|+|||+|.||..+|..|...|++|++||+++...+...+. .+...+++++.+++||+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDv 87 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDV 87 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSE
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCE
Confidence 6899999999999999999999999999999875433322221 13445677788899999
Q ss_pred EEEeCCCC---------hhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHh
Q 027577 96 VVVNTPLT---------EKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSS 144 (221)
Q Consensus 96 Vv~~~p~~---------~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~ 144 (221)
|++|+|.. ......+ ++....++++++||+.|.-.+-..+.+.+.+.+
T Consensus 88 viiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~ 144 (478)
T 2y0c_A 88 QFIAVGTPPDEDGSADLQYVLAAA-RNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAE 144 (478)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEEeCCCcccCCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHH
Confidence 99999842 2222222 445667899999999984334344445555443
No 118
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=98.96 E-value=1.7e-09 Score=89.89 Aligned_cols=99 Identities=18% Similarity=0.353 Sum_probs=72.6
Q ss_pred CCEEEEEccCHHHHHHHHHHccCC----CeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcch
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFN----CNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 111 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G----~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~ 111 (221)
.++|+|||+|.||+.+++.|...| .+|.+||+++.. .|+....+++++++++|+|++|+| ......++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~------~g~~~~~~~~~~~~~~D~vi~~v~-~~~~~~v~~ 76 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN------TTLNYMSSNEELARHCDIIVCAVK-PDIAGSVLN 76 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS------SSSEECSCHHHHHHHCSEEEECSC-TTTHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc------CceEEeCCHHHHHhcCCEEEEEeC-HHHHHHHHH
Confidence 468999999999999999998888 689999997643 467767788899999999999999 344444442
Q ss_pred HHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhC
Q 027577 112 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 145 (221)
Q Consensus 112 ~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g 145 (221)
+....+ ++.++|....| ++.+.+.+.+..+
T Consensus 77 -~l~~~l-~~~~vv~~~~g--i~~~~l~~~~~~~ 106 (262)
T 2rcy_A 77 -NIKPYL-SSKLLISICGG--LNIGKLEEMVGSE 106 (262)
T ss_dssp -HSGGGC-TTCEEEECCSS--CCHHHHHHHHCTT
T ss_pred -HHHHhc-CCCEEEEECCC--CCHHHHHHHhCCC
Confidence 334455 45666666554 3445666666553
No 119
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=98.96 E-value=1.6e-09 Score=91.80 Aligned_cols=108 Identities=13% Similarity=0.152 Sum_probs=75.1
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec------------CCHHhhcC---CCCEEEEeCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE------------EDLDTMLP---KCDIVVVNTP 101 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~------------~~l~ell~---~aDvVv~~~p 101 (221)
++|+|||+|.||..+|..|...|++|.+||+++...+...+.|.... .+.+++.+ ++|+|++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 58999999999999999999999999999997544444444343221 13344444 8999999999
Q ss_pred CChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCc
Q 027577 102 LTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHI 147 (221)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i 147 (221)
. ..+..++ ++....+++++++|+++.|- -..+.+.+.+...++
T Consensus 84 ~-~~~~~v~-~~l~~~l~~~~~iv~~~~g~-~~~~~l~~~~~~~~v 126 (316)
T 2ew2_A 84 A-QQLDAMF-KAIQPMITEKTYVLCLLNGL-GHEDVLEKYVPKENI 126 (316)
T ss_dssp H-HHHHHHH-HHHGGGCCTTCEEEECCSSS-CTHHHHTTTSCGGGE
T ss_pred c-ccHHHHH-HHHHHhcCCCCEEEEecCCC-CcHHHHHHHcCCccE
Confidence 3 3444433 34556788999999998653 234556666654433
No 120
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.96 E-value=1.6e-09 Score=87.29 Aligned_cols=116 Identities=18% Similarity=0.212 Sum_probs=81.0
Q ss_pred CEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh-cC-------ceecCCHHhhcCCCCEEEEeCCCChhhh
Q 027577 37 KTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-TG-------AKFEEDLDTMLPKCDIVVVNTPLTEKTR 107 (221)
Q Consensus 37 ~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-~g-------~~~~~~l~ell~~aDvVv~~~p~~~~t~ 107 (221)
++|+||| .|.||+.+++.|...|++|.+++|++...+...+ .+ +. ..+++++++++|+|++++| .....
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~Vi~~~~-~~~~~ 78 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEACDIAVLTIP-WEHAI 78 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHHCSEEEECSC-HHHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhcCCEEEEeCC-hhhHH
Confidence 5899999 9999999999999999999999986533322221 12 33 3577888899999999999 33333
Q ss_pred hcchHHHHhcCCCCCEEEEcCCCCccC------------HHHHHHHHHhCCceEEEeeCCCCCCC
Q 027577 108 GMFDKDRIAKMKKGVLIVNNARGAIMD------------TQAVVDACSSGHIAGYSGDVWNPQPA 160 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn~srg~~vd------------~~al~~al~~g~i~~a~lDV~~~ep~ 160 (221)
.++. +....++ ++++|+++.|--.+ .+.+.+.+.. . ..++++.+.|.
T Consensus 79 ~~~~-~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~--~--~~v~~~~~~~~ 137 (212)
T 1jay_A 79 DTAR-DLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES--E--KVVSALHTIPA 137 (212)
T ss_dssp HHHH-HTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC--S--CEEECCTTCCH
T ss_pred HHHH-HHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC--C--eEEEEccchHH
Confidence 3332 2333454 89999999875432 5667776652 2 36787776653
No 121
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=98.95 E-value=1.5e-09 Score=94.11 Aligned_cols=95 Identities=13% Similarity=0.081 Sum_probs=71.4
Q ss_pred CCEEEEEccCHHHHHHHHHHccCC-------CeEEEEcCCCC-----ChhHHHhc--------------CceecCCHHhh
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFN-------CNLLYHDRVKM-----DPQLEKET--------------GAKFEEDLDTM 89 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G-------~~V~~~d~~~~-----~~~~~~~~--------------g~~~~~~l~el 89 (221)
.++|+|||+|.||..+|..|...| ++|.+|++++. ..+...+. ++....+++++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQA 87 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHH
Confidence 468999999999999999998888 89999999764 33322221 23444678888
Q ss_pred cCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCc
Q 027577 90 LPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAI 132 (221)
Q Consensus 90 l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~ 132 (221)
++++|+|++++|. .....++ ++....+++++++|+++.|-.
T Consensus 88 ~~~aD~Vilav~~-~~~~~v~-~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 88 AEDADILIFVVPH-QFIGKIC-DQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp HTTCSEEEECCCG-GGHHHHH-HHHTTCSCTTCEEEECCCCBC
T ss_pred HcCCCEEEEeCCH-HHHHHHH-HHHHhhCCCCCEEEEECCccC
Confidence 9999999999993 3334433 345567888999999988754
No 122
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=98.95 E-value=2.3e-09 Score=97.40 Aligned_cols=117 Identities=15% Similarity=0.132 Sum_probs=82.6
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh-----------cC-------------ceecCCHHhhcC
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-----------TG-------------AKFEEDLDTMLP 91 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-----------~g-------------~~~~~~l~ell~ 91 (221)
-++|||||+|.||..+|..+...|++|++||+++...+.+.+ .| +....+++ .++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~ 83 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-ALA 83 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-GGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-Hhc
Confidence 368999999999999999999999999999997643332211 12 23445665 688
Q ss_pred CCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEE-EcCCCCccCHHHHHHHHHhCCceEEEeeCCCC
Q 027577 92 KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIV-NNARGAIMDTQAVVDACSSGHIAGYSGDVWNP 157 (221)
Q Consensus 92 ~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lI-n~srg~~vd~~al~~al~~g~i~~a~lDV~~~ 157 (221)
+||+|+.++|.+.+.+..+-.+..+.++++++|+ |+|.- ....+.+.+.. .-...++..|.+
T Consensus 84 ~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti---~i~~ia~~~~~-p~~~ig~hf~~P 146 (483)
T 3mog_A 84 AADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSI---SITAIAAEIKN-PERVAGLHFFNP 146 (483)
T ss_dssp GCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSS---CHHHHTTTSSS-GGGEEEEEECSS
T ss_pred CCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCC---CHHHHHHHccC-ccceEEeeecCh
Confidence 9999999999776665555556777889999995 56543 34555555542 234467775553
No 123
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=98.95 E-value=1.4e-09 Score=95.48 Aligned_cols=93 Identities=10% Similarity=0.158 Sum_probs=70.0
Q ss_pred CEEEEEccCHHHHHHHHHHccCC-------CeEEEEcCCCC-----ChhHHHhc--------------CceecCCHHhhc
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFN-------CNLLYHDRVKM-----DPQLEKET--------------GAKFEEDLDTML 90 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G-------~~V~~~d~~~~-----~~~~~~~~--------------g~~~~~~l~ell 90 (221)
++|+|||+|.||..+|..|...| .+|.+|++++. ..+...+. ++....++++++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea~ 101 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASVI 101 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHHH
Confidence 47999999999999999998888 89999999765 33332221 244456788889
Q ss_pred CCCCEEEEeCCCChhhhhcchHHHHh----cCCCCCEEEEcCCCC
Q 027577 91 PKCDIVVVNTPLTEKTRGMFDKDRIA----KMKKGVLIVNNARGA 131 (221)
Q Consensus 91 ~~aDvVv~~~p~~~~t~~~i~~~~~~----~mk~ga~lIn~srg~ 131 (221)
+++|+|++++| +.....++ .+... .+++++++|+++.|-
T Consensus 102 ~~aDvVilav~-~~~~~~vl-~~i~~~~~~~l~~~~ivvs~~~Gi 144 (375)
T 1yj8_A 102 NDADLLIFIVP-CQYLESVL-ASIKESESIKIASHAKAISLTKGF 144 (375)
T ss_dssp TTCSEEEECCC-HHHHHHHH-HHHTC---CCCCTTCEEEECCCSC
T ss_pred cCCCEEEEcCC-HHHHHHHH-HHHhhhhhccCCCCCEEEEeCCcc
Confidence 99999999999 34444443 23444 678899999998873
No 124
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=98.94 E-value=2.6e-09 Score=92.22 Aligned_cols=89 Identities=21% Similarity=0.309 Sum_probs=68.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcC-----------ceecCCHHhhcCCCCEEEEeCCCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG-----------AKFEEDLDTMLPKCDIVVVNTPLT 103 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g-----------~~~~~~l~ell~~aDvVv~~~p~~ 103 (221)
...+|+|||+|.||..+|..|...|++|.+|+|++...+...+.+ +....++++ ++.+|+|++++| +
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk-~ 90 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIP-V 90 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSC-G
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECC-H
Confidence 367999999999999999999999999999999754444444433 455667888 899999999999 3
Q ss_pred hhhhhcchHHHHhcCC-CCCEEEEcCCC
Q 027577 104 EKTRGMFDKDRIAKMK-KGVLIVNNARG 130 (221)
Q Consensus 104 ~~t~~~i~~~~~~~mk-~ga~lIn~srg 130 (221)
..+..++ ..++ +++++|+++.|
T Consensus 91 ~~~~~v~-----~~l~~~~~~vv~~~nG 113 (335)
T 1z82_A 91 QYIREHL-----LRLPVKPSMVLNLSKG 113 (335)
T ss_dssp GGHHHHH-----TTCSSCCSEEEECCCC
T ss_pred HHHHHHH-----HHhCcCCCEEEEEeCC
Confidence 4444333 3344 78999999977
No 125
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.94 E-value=2.3e-09 Score=95.15 Aligned_cols=106 Identities=12% Similarity=0.127 Sum_probs=78.2
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc------------------eecCCHHhhcCCCCEEEE
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA------------------KFEEDLDTMLPKCDIVVV 98 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~------------------~~~~~l~ell~~aDvVv~ 98 (221)
++|+|||+|.||..+|..|.. |++|+++|+++...+...+.+. ....++++.++++|+|++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence 589999999999999999998 9999999997543333332222 334567788889999999
Q ss_pred eCCCCh----------hhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhC
Q 027577 99 NTPLTE----------KTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 145 (221)
Q Consensus 99 ~~p~~~----------~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g 145 (221)
|+|... .....+ +.... ++++++||+.+.-.+-..+.+.+.+.+.
T Consensus 80 avpt~~~~~~~~~dl~~v~~v~-~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~ 134 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQHVETVI-KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD 134 (402)
T ss_dssp CCCCCEETTTTEECCHHHHHHH-HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS
T ss_pred ecCCCcccCCCCccHHHHHHHH-HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC
Confidence 999542 133333 34555 8899999998877776677777776554
No 126
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=98.93 E-value=5.5e-10 Score=97.50 Aligned_cols=95 Identities=21% Similarity=0.283 Sum_probs=70.8
Q ss_pred EEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhc--------------CceecCCHHhhcCCCCEEEEeCCCC
Q 027577 38 TVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET--------------GAKFEEDLDTMLPKCDIVVVNTPLT 103 (221)
Q Consensus 38 ~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~--------------g~~~~~~l~ell~~aDvVv~~~p~~ 103 (221)
+|+|||+|.||..+|..|...|++|.+||+++...+...+. ++....+++++++++|+|++++|.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~- 95 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT- 95 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCH-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCCh-
Confidence 89999999999999999999999999999875433333322 234446788889999999999993
Q ss_pred hhhhhcchHH---HHhcCCC-CCEEEEcCCCCcc
Q 027577 104 EKTRGMFDKD---RIAKMKK-GVLIVNNARGAIM 133 (221)
Q Consensus 104 ~~t~~~i~~~---~~~~mk~-ga~lIn~srg~~v 133 (221)
.....++... ....+++ ++++|+++.|-..
T Consensus 96 ~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~ 129 (366)
T 1evy_A 96 QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIER 129 (366)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCT
T ss_pred HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCC
Confidence 4444444321 4455678 8999999877433
No 127
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.93 E-value=9.6e-10 Score=89.68 Aligned_cols=92 Identities=16% Similarity=0.261 Sum_probs=66.0
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEE-EcCCCCChhH-HHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchHH
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLY-HDRVKMDPQL-EKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKD 113 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~-~d~~~~~~~~-~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~ 113 (221)
-++|+|||+|+||+.+|+.|...|++|.+ +||++...+. ....++....+..+.++++|+|++++|. .....++. +
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~-~~~~~v~~-~ 100 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPY-DSIADIVT-Q 100 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCG-GGHHHHHT-T
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCCh-HHHHHHHH-H
Confidence 36899999999999999999999999998 9987654443 3345654444556668999999999992 22222221 1
Q ss_pred HHhcCCCCCEEEEcCCCC
Q 027577 114 RIAKMKKGVLIVNNARGA 131 (221)
Q Consensus 114 ~~~~mk~ga~lIn~srg~ 131 (221)
+.. .++.++|+++.|-
T Consensus 101 -l~~-~~~~ivi~~~~g~ 116 (220)
T 4huj_A 101 -VSD-WGGQIVVDASNAI 116 (220)
T ss_dssp -CSC-CTTCEEEECCCCB
T ss_pred -hhc-cCCCEEEEcCCCC
Confidence 112 3588999998764
No 128
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.89 E-value=1.1e-08 Score=84.20 Aligned_cols=99 Identities=21% Similarity=0.307 Sum_probs=74.3
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeE-EEEcCCCCChhHHHhcCceecCCHHhhc-CCCCEEEEeCCCChhhhhcchHHH
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNL-LYHDRVKMDPQLEKETGAKFEEDLDTML-PKCDIVVVNTPLTEKTRGMFDKDR 114 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V-~~~d~~~~~~~~~~~~g~~~~~~l~ell-~~aDvVv~~~p~~~~t~~~i~~~~ 114 (221)
++|||||+|.||+.+++.+...|+++ .++|++.. .+ . .+.++++++ .++|+|++|+|.. . ..+..
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~-~~---~----~~~~~~~l~~~~~DvVv~~~~~~--~---~~~~~ 67 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGE-HE---K----MVRGIDEFLQREMDVAVEAASQQ--A---VKDYA 67 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-CT---T----EESSHHHHTTSCCSEEEECSCHH--H---HHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcc-hh---h----hcCCHHHHhcCCCCEEEECCCHH--H---HHHHH
Confidence 48999999999999999998889997 68898642 21 1 456899999 6999999999932 1 12223
Q ss_pred HhcCCCCCEEEEcCCCCccCH---HHHHHHHHhCCce
Q 027577 115 IAKMKKGVLIVNNARGAIMDT---QAVVDACSSGHIA 148 (221)
Q Consensus 115 ~~~mk~ga~lIn~srg~~vd~---~al~~al~~g~i~ 148 (221)
...++.|..+|+.+.+..-+. +.|.++.++.+..
T Consensus 68 ~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~ 104 (236)
T 2dc1_A 68 EKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRR 104 (236)
T ss_dssp HHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCC
T ss_pred HHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCe
Confidence 455778999999988877666 5677777664444
No 129
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.87 E-value=1.3e-08 Score=77.39 Aligned_cols=106 Identities=12% Similarity=0.150 Sum_probs=80.3
Q ss_pred CCCCEEEEEcc----CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhc
Q 027577 34 LEGKTVGTVGC----GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGM 109 (221)
Q Consensus 34 l~g~~vgIIG~----G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~ 109 (221)
++-++|+|||+ |.||+.+++.|...|++|+.+|++.. + -.|...+.+++++.+.+|++++++| .+....+
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~--~---i~G~~~~~s~~el~~~vDlvii~vp-~~~v~~v 85 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYD--E---IEGLKCYRSVRELPKDVDVIVFVVP-PKVGLQV 85 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS--E---ETTEECBSSGGGSCTTCCEEEECSC-HHHHHHH
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCC--e---ECCeeecCCHHHhCCCCCEEEEEeC-HHHHHHH
Confidence 56789999999 99999999999999999888887542 1 1477777899999999999999999 4555555
Q ss_pred chHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEee
Q 027577 110 FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGD 153 (221)
Q Consensus 110 i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lD 153 (221)
+. +..+ ...++++++.+. ..+++.+..++..+. .+|
T Consensus 86 ~~-~~~~-~g~~~i~~~~~~----~~~~l~~~a~~~Gi~--~ig 121 (138)
T 1y81_A 86 AK-EAVE-AGFKKLWFQPGA----ESEEIRRFLEKAGVE--YSF 121 (138)
T ss_dssp HH-HHHH-TTCCEEEECTTS----CCHHHHHHHHHHTCE--EEC
T ss_pred HH-HHHH-cCCCEEEEcCcc----HHHHHHHHHHHCCCE--EEc
Confidence 54 3444 566777777643 257788888887777 555
No 130
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.86 E-value=5.6e-09 Score=94.64 Aligned_cols=105 Identities=15% Similarity=0.148 Sum_probs=77.8
Q ss_pred CCEEEEEccCHHHHHHHHHHccC-CC-eEEEEcCCCC----ChhHHHh---------------------cC-ceecCCHH
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPF-NC-NLLYHDRVKM----DPQLEKE---------------------TG-AKFEEDLD 87 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~-G~-~V~~~d~~~~----~~~~~~~---------------------~g-~~~~~~l~ 87 (221)
-++|+|||+|.||..+|..|... |+ +|++||+++. ..+...+ .+ +...++ .
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd-~ 96 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD-F 96 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC-G
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc-H
Confidence 36899999999999999999999 99 9999999875 3222211 12 333445 6
Q ss_pred hhcCCCCEEEEeCCCCh--------hhhhcc--hHHHHhcCCCCCEEEEcCCCCccCHHHHHHH
Q 027577 88 TMLPKCDIVVVNTPLTE--------KTRGMF--DKDRIAKMKKGVLIVNNARGAIMDTQAVVDA 141 (221)
Q Consensus 88 ell~~aDvVv~~~p~~~--------~t~~~i--~~~~~~~mk~ga~lIn~srg~~vd~~al~~a 141 (221)
+.+++||+|++|+|... +...+. .+.....+++|+++|+.|.-.+-..+.+.+.
T Consensus 97 ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ 160 (478)
T 3g79_A 97 SRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQ 160 (478)
T ss_dssp GGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHH
T ss_pred HHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHH
Confidence 78899999999999542 222232 3456778999999999998777666777653
No 131
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=98.85 E-value=4.2e-09 Score=88.33 Aligned_cols=91 Identities=19% Similarity=0.217 Sum_probs=66.5
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhc---Cc----e-ecCCHHhhcCCCCEEEEeCCCChhhhh
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET---GA----K-FEEDLDTMLPKCDIVVVNTPLTEKTRG 108 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~---g~----~-~~~~l~ell~~aDvVv~~~p~~~~t~~ 108 (221)
++|+|||+|.||..+|..|...|++|.+|++++...+..... +. . ..++ .+.++++|+|++++|.. .+..
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~v~~~-~~~~ 78 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAND-PDFLATSDLLLVTLKAW-QVSD 78 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESC-HHHHHTCSEEEECSCGG-GHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecC-ccccCCCCEEEEEecHH-hHHH
Confidence 589999999999999999999999999999976543322211 11 1 1233 46678899999999943 3444
Q ss_pred cchHHHHhcCCCCCEEEEcCCC
Q 027577 109 MFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 109 ~i~~~~~~~mk~ga~lIn~srg 130 (221)
++ ++....+++++++|+++.|
T Consensus 79 v~-~~l~~~l~~~~~vv~~~~g 99 (291)
T 1ks9_A 79 AV-KSLASTLPVTTPILLIHNG 99 (291)
T ss_dssp HH-HHHHTTSCTTSCEEEECSS
T ss_pred HH-HHHHhhCCCCCEEEEecCC
Confidence 44 3456678889999998765
No 132
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.84 E-value=4.1e-09 Score=95.68 Aligned_cols=107 Identities=10% Similarity=0.110 Sum_probs=78.2
Q ss_pred CEEEEEccCHHHHHHHHHHccC--CCeEEEEcCCCCChhHHHh-------------------cCceecCCHHhhcCCCCE
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF--NCNLLYHDRVKMDPQLEKE-------------------TGAKFEEDLDTMLPKCDI 95 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~-------------------~g~~~~~~l~ell~~aDv 95 (221)
++|+|||+|.||..+|..|... |++|++||+++...+...+ .++...+++++.+++||+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aDv 89 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADL 89 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCCE
Confidence 6999999999999999999876 7999999986533322221 123445577788889999
Q ss_pred EEEeCCCChh--------------hhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHh
Q 027577 96 VVVNTPLTEK--------------TRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSS 144 (221)
Q Consensus 96 Vv~~~p~~~~--------------t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~ 144 (221)
|++|+|.... ... ..+.....++++++||+.|.-.+-..+.+.+.+.+
T Consensus 90 vii~Vptp~~~~g~~~~~~~dl~~v~~-~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~ 151 (481)
T 2o3j_A 90 IFISVNTPTKMYGRGKGMAPDLKYVES-VSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILRE 151 (481)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHH-HHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEecCCccccccccccCCCcHHHHHH-HHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHH
Confidence 9999884321 111 12445677999999999987666566777777776
No 133
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=98.82 E-value=2.2e-08 Score=90.50 Aligned_cols=116 Identities=13% Similarity=0.178 Sum_probs=78.8
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh-----------cC-----------ceecCCHHhhcCCC
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-----------TG-----------AKFEEDLDTMLPKC 93 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-----------~g-----------~~~~~~l~ell~~a 93 (221)
=++|+|||+|.||..+|..+...|++|++||+++...+.... .| .....++ +.+++|
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~a 115 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTV 115 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCC
Confidence 468999999999999999999999999999987533222111 01 1223466 568899
Q ss_pred CEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCC
Q 027577 94 DIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVW 155 (221)
Q Consensus 94 DvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~ 155 (221)
|+|+.++|...+....+-.+....++++++|++.+.+ +....+.+.+.. .-..+++..|
T Consensus 116 DlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~--~~~~~la~~~~~-~~~~ig~hf~ 174 (463)
T 1zcj_A 116 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA--LNVDDIASSTDR-PQLVIGTHFF 174 (463)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHTTSSC-GGGEEEEEEC
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCC--cCHHHHHHHhcC-CcceEEeecC
Confidence 9999999965544444445566678999999974433 344466665543 2233566666
No 134
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=98.82 E-value=1.3e-08 Score=85.84 Aligned_cols=94 Identities=17% Similarity=0.137 Sum_probs=66.3
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHH
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRI 115 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~ 115 (221)
++++.|+|.|.+|++++..|...|.+|.+++|+..+.+...+.++... +++++ .++|+||.++|........+..+.+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~-~~~~l-~~~DiVInaTp~Gm~~~~~l~~~~l 195 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCF-MEPPK-SAFDLIINATSASLHNELPLNKEVL 195 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEE-SSCCS-SCCSEEEECCTTCCCCSCSSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEe-cHHHh-ccCCEEEEcccCCCCCCCCCChHHH
Confidence 899999999999999999999999999999998766544435565543 44443 3899999999954322122333322
Q ss_pred -hcCCCCCEEEEcCCCC
Q 027577 116 -AKMKKGVLIVNNARGA 131 (221)
Q Consensus 116 -~~mk~ga~lIn~srg~ 131 (221)
+.++++.+++|+....
T Consensus 196 ~~~l~~~~~v~D~vY~P 212 (269)
T 3phh_A 196 KGYFKEGKLAYDLAYGF 212 (269)
T ss_dssp HHHHHHCSEEEESCCSS
T ss_pred HhhCCCCCEEEEeCCCC
Confidence 2455666777766654
No 135
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=98.78 E-value=1.9e-08 Score=89.43 Aligned_cols=96 Identities=25% Similarity=0.357 Sum_probs=75.8
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCC------CChhHHHhcCceecCCHHhhcCCCCEEEEeCCCCh
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVK------MDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTE 104 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~------~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~ 104 (221)
..-|+||||+|||+|+-|++-|..|+..|.+|++--|.. .+.+.+.+.|+... +.+|+++.||+|++.+|+..
T Consensus 32 ~~~lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~-~~~eA~~~ADvV~~L~PD~~ 110 (491)
T 3ulk_A 32 ASYLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVG-TYEELIPQADLVINLTPDKQ 110 (491)
T ss_dssp TGGGTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEE-EHHHHGGGCSEEEECSCGGG
T ss_pred hHHHcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEec-CHHHHHHhCCEEEEeCChhh
Confidence 345899999999999999999999999999988765521 12345666788765 89999999999999999533
Q ss_pred hhhhcchHHHHhcCCCCCEEEEcCCC
Q 027577 105 KTRGMFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 105 ~t~~~i~~~~~~~mk~ga~lIn~srg 130 (221)
+ ..++ ++....||+|+.+. .|.|
T Consensus 111 q-~~vy-~~I~p~lk~G~~L~-faHG 133 (491)
T 3ulk_A 111 H-SDVV-RTVQPLMKDGAALG-YSHG 133 (491)
T ss_dssp H-HHHH-HHHGGGSCTTCEEE-ESSC
T ss_pred H-HHHH-HHHHhhCCCCCEEE-ecCc
Confidence 3 3344 56899999999887 5555
No 136
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.78 E-value=7.6e-09 Score=90.54 Aligned_cols=97 Identities=12% Similarity=0.152 Sum_probs=73.4
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCcee-------cCCHHhhcCCCCEEEEeCCCCh-
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKF-------EEDLDTMLPKCDIVVVNTPLTE- 104 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~-------~~~l~ell~~aDvVv~~~p~~~- 104 (221)
.+.+++|.|+|.|.+|+.+++.++.+|++|+++|+++...+.+.+.+... ..++.+.+..+|+|+.+++...
T Consensus 164 ~l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~ 243 (361)
T 1pjc_A 164 GVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGR 243 (361)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCC
Confidence 47789999999999999999999999999999999764444443332111 1245566778999999987432
Q ss_pred hhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 105 KTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 105 ~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
....++.++.++.|+++.+++|++-
T Consensus 244 ~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 244 RAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp SCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred CCCeecCHHHHhhCCCCCEEEEEec
Confidence 1234457778899999999999974
No 137
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.75 E-value=2.4e-08 Score=89.45 Aligned_cols=110 Identities=16% Similarity=0.163 Sum_probs=75.7
Q ss_pred CCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCcee-cCCHHhh---------------cCCCCEEE
Q 027577 34 LEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKF-EEDLDTM---------------LPKCDIVV 97 (221)
Q Consensus 34 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~-~~~l~el---------------l~~aDvVv 97 (221)
-.|.++.|||+|.||..+|..|...|++|++||+++...+...+..... ...++++ +++||+|+
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvi 88 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFI 88 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEE
T ss_pred ccCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEE
Confidence 4689999999999999999999999999999999765444333211100 0111111 46899999
Q ss_pred EeCCCChhh--------hhcc--hHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHH
Q 027577 98 VNTPLTEKT--------RGMF--DKDRIAKMKKGVLIVNNARGAIMDTQAVVDACS 143 (221)
Q Consensus 98 ~~~p~~~~t--------~~~i--~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~ 143 (221)
+|+|..... ..+. .+...+.|++|+++|+.|.-.+-..+.+.+.+.
T Consensus 89 i~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~ 144 (431)
T 3ojo_A 89 IAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVI 144 (431)
T ss_dssp ECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHH
T ss_pred EEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHH
Confidence 999943321 1222 245677899999999999887777777777643
No 138
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.75 E-value=3.4e-08 Score=84.22 Aligned_cols=112 Identities=16% Similarity=0.266 Sum_probs=77.5
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChh-HHHhcCc---eec--CCHHhhcCCCCEEEEeCCCCh
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQ-LEKETGA---KFE--EDLDTMLPKCDIVVVNTPLTE 104 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~-~~~~~g~---~~~--~~l~ell~~aDvVv~~~p~~~ 104 (221)
.++.+++++|+|.|.+|++++..|...|+ +|.+++|+....+ .++..+. ... +++.+.+.++|+|+.++|...
T Consensus 137 ~~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~ 216 (297)
T 2egg_A 137 ITLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGM 216 (297)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTC
T ss_pred CCCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCC
Confidence 35789999999999999999999999998 8999999753332 3333332 221 345677889999999999653
Q ss_pred hhh--h-cchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 105 KTR--G-MFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 105 ~t~--~-~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
... . .++ ...++++.+++|++-. +..+ .|.+..++..+.
T Consensus 217 ~~~~~~~~i~---~~~l~~~~~v~D~~y~-P~~T-~ll~~A~~~G~~ 258 (297)
T 2egg_A 217 HPRVEVQPLS---LERLRPGVIVSDIIYN-PLET-KWLKEAKARGAR 258 (297)
T ss_dssp SSCCSCCSSC---CTTCCTTCEEEECCCS-SSSC-HHHHHHHHTTCE
T ss_pred CCCCCCCCCC---HHHcCCCCEEEEcCCC-CCCC-HHHHHHHHCcCE
Confidence 211 1 122 2457889999999885 3333 366666655544
No 139
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.73 E-value=1.6e-08 Score=77.45 Aligned_cols=103 Identities=17% Similarity=0.156 Sum_probs=78.0
Q ss_pred CCEEEEEcc----CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcch
Q 027577 36 GKTVGTVGC----GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 111 (221)
Q Consensus 36 g~~vgIIG~----G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~ 111 (221)
-++|+|||+ |++|..+++.|...|++|+.+|++....+ -.|+..+.+++++.+.+|++++++| .+....++.
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~---i~G~~~~~sl~el~~~~Dlvii~vp-~~~v~~v~~ 88 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKT---LLGQQGYATLADVPEKVDMVDVFRN-SEAAWGVAQ 88 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSE---ETTEECCSSTTTCSSCCSEEECCSC-STHHHHHHH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccc---cCCeeccCCHHHcCCCCCEEEEEeC-HHHHHHHHH
Confidence 578999999 89999999999999999888887541011 1477777789999899999999999 455555554
Q ss_pred HHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 112 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 112 ~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
+ ..+ ...+.++++.+ .. ++++.+.+++..+.
T Consensus 89 ~-~~~-~g~~~i~i~~~--~~--~~~l~~~a~~~Gi~ 119 (145)
T 2duw_A 89 E-AIA-IGAKTLWLQLG--VI--NEQAAVLAREAGLS 119 (145)
T ss_dssp H-HHH-HTCCEEECCTT--CC--CHHHHHHHHTTTCE
T ss_pred H-HHH-cCCCEEEEcCC--hH--HHHHHHHHHHcCCE
Confidence 3 333 55667777753 22 67888888888777
No 140
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=98.72 E-value=1.2e-08 Score=96.81 Aligned_cols=117 Identities=12% Similarity=0.107 Sum_probs=81.1
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHH-----------HhcC-------------ceecCCHHhhcC
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLE-----------KETG-------------AKFEEDLDTMLP 91 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~-----------~~~g-------------~~~~~~l~ell~ 91 (221)
=++|||||+|.||..+|..+...|++|++||+++...+.. .+.| +....++ +.++
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~ 392 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFG 392 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTGG
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHHC
Confidence 3579999999999999999999999999999975332221 1112 2334566 6788
Q ss_pred CCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCC
Q 027577 92 KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWN 156 (221)
Q Consensus 92 ~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~ 156 (221)
+||+||.++|.+.+.+..+-.+....++++++|++.+.+ +....+.+.+.. .-...++..|.
T Consensus 393 ~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntSt--l~i~~la~~~~~-~~~~ig~hf~~ 454 (715)
T 1wdk_A 393 NVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTST--ISISLLAKALKR-PENFVGMHFFN 454 (715)
T ss_dssp GCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS--SCHHHHGGGCSC-GGGEEEEECCS
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCC--CCHHHHHHHhcC-ccceEEEEccC
Confidence 999999999977666555555667788999999855443 334455555532 22335667554
No 141
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=98.72 E-value=1.1e-07 Score=81.47 Aligned_cols=107 Identities=16% Similarity=0.086 Sum_probs=76.8
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc---------------eecCCHHhhcCCCCEEEEeCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA---------------KFEEDLDTMLPKCDIVVVNTP 101 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~---------------~~~~~l~ell~~aDvVv~~~p 101 (221)
++|+|||.|.||..+|..|...|.+|.+++|+. .+...+.|+ ....+++++.+.+|+|++++|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK 80 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIK 80 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecC
Confidence 689999999999999999999999999999965 243333332 123466777668999999999
Q ss_pred CChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 102 LTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
... +..++ ++....++++++||.+..| +-.++.+.+.+...++.
T Consensus 81 ~~~-~~~~l-~~l~~~l~~~t~Iv~~~nG-i~~~~~l~~~~~~~~vl 124 (320)
T 3i83_A 81 VVE-GADRV-GLLRDAVAPDTGIVLISNG-IDIEPEVAAAFPDNEVI 124 (320)
T ss_dssp CCT-TCCHH-HHHTTSCCTTCEEEEECSS-SSCSHHHHHHSTTSCEE
T ss_pred CCC-hHHHH-HHHHhhcCCCCEEEEeCCC-CChHHHHHHHCCCCcEE
Confidence 433 33332 4455667889999998876 33346677777655544
No 142
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.71 E-value=1.3e-08 Score=80.21 Aligned_cols=95 Identities=16% Similarity=0.173 Sum_probs=67.7
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccC-CCeEEEEcCCCCChhHHHhcCceec----CC---HHhh--cCCCCEEEEeCC
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPF-NCNLLYHDRVKMDPQLEKETGAKFE----ED---LDTM--LPKCDIVVVNTP 101 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~-G~~V~~~d~~~~~~~~~~~~g~~~~----~~---l~el--l~~aDvVv~~~p 101 (221)
.++.+++|+|+|+|.+|+.+|+.|... |++|+++|+++...+.+.+.|+..+ .+ ++++ +.++|+|++++|
T Consensus 35 ~~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 35 INPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp BCCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence 357789999999999999999999998 9999999997654444555565422 22 3444 678999999999
Q ss_pred CChhhhhcchHHHHhcCCCCCEEEEcC
Q 027577 102 LTEKTRGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~ga~lIn~s 128 (221)
..+.+..++ ..+..+.+...+|..+
T Consensus 115 ~~~~~~~~~--~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 115 HHQGNQTAL--EQLQRRNYKGQIAAIA 139 (183)
T ss_dssp SHHHHHHHH--HHHHHTTCCSEEEEEE
T ss_pred ChHHHHHHH--HHHHHHCCCCEEEEEE
Confidence 544443332 2455566666666543
No 143
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=98.71 E-value=2.9e-09 Score=89.68 Aligned_cols=87 Identities=16% Similarity=0.130 Sum_probs=57.9
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeE-EEEcCCCCChhHH-HhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHH
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNL-LYHDRVKMDPQLE-KETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDR 114 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V-~~~d~~~~~~~~~-~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~ 114 (221)
++|||||+|+||+.+++.|... ++| .+||+++...+.+ ...+. ...+++++++++|+|++++|... . .+.
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~DvVilav~~~~-~-----~~v 74 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGG-KAATLEKHPELNGVVFVIVPDRY-I-----KTV 74 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-CCCSSCCCCC---CEEECSCTTT-H-----HHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCC-ccCCHHHHHhcCCEEEEeCChHH-H-----HHH
Confidence 4799999999999999999877 888 5899875433333 24465 55678888899999999999432 2 233
Q ss_pred HhcC-CCCCEEEEcCCCC
Q 027577 115 IAKM-KKGVLIVNNARGA 131 (221)
Q Consensus 115 ~~~m-k~ga~lIn~srg~ 131 (221)
+..+ +++.+|||++-+-
T Consensus 75 ~~~l~~~~~ivi~~s~~~ 92 (276)
T 2i76_A 75 ANHLNLGDAVLVHCSGFL 92 (276)
T ss_dssp HTTTCCSSCCEEECCSSS
T ss_pred HHHhccCCCEEEECCCCC
Confidence 3334 6789999998553
No 144
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.69 E-value=1.2e-08 Score=86.24 Aligned_cols=112 Identities=13% Similarity=0.121 Sum_probs=74.8
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHh-cCceecCCHHhhcCCCCEEEEeCCCC--hhhh
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKE-TGAKFEEDLDTMLPKCDIVVVNTPLT--EKTR 107 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~-~g~~~~~~l~ell~~aDvVv~~~p~~--~~t~ 107 (221)
.++.|+++.|+|.|.+|++++..|...|+ +|.+++|+....+.+.. ......++++++++++|+||.++|.. +...
T Consensus 113 ~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~ 192 (277)
T 3don_A 113 EGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNTD 192 (277)
T ss_dssp TTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------C
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCCc
Confidence 46789999999999999999999999999 89999997643322211 11112345667788999999999953 2221
Q ss_pred hcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 108 GMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
..+. .+.++++++++|+.-... .+ .|.+..++..+.
T Consensus 193 ~~l~---~~~l~~~~~V~D~vY~P~-~T-~ll~~A~~~G~~ 228 (277)
T 3don_A 193 SVIS---LNRLASHTLVSDIVYNPY-KT-PILIEAEQRGNP 228 (277)
T ss_dssp CSSC---CTTCCSSCEEEESCCSSS-SC-HHHHHHHHTTCC
T ss_pred CCCC---HHHcCCCCEEEEecCCCC-CC-HHHHHHHHCcCE
Confidence 1222 355788999999887643 33 455555544443
No 145
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=98.69 E-value=7.9e-09 Score=87.87 Aligned_cols=103 Identities=12% Similarity=0.093 Sum_probs=72.2
Q ss_pred CEEEEEccCHHHHHHHHHHccC-----C-CeEEEEcCCCCChhHHHh-cCceecC-------------CHHhhcCCCCEE
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF-----N-CNLLYHDRVKMDPQLEKE-TGAKFEE-------------DLDTMLPKCDIV 96 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~-----G-~~V~~~d~~~~~~~~~~~-~g~~~~~-------------~l~ell~~aDvV 96 (221)
++|+|||+|.||..+|..|... | ++|.+|+| +...+...+ .|+.... +..+.++.+|+|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v 87 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDYI 87 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCEE
Confidence 5899999999999999999888 8 99999998 433344444 4554321 233457889999
Q ss_pred EEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCH-HHHHHHHHh
Q 027577 97 VVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDT-QAVVDACSS 144 (221)
Q Consensus 97 v~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~-~al~~al~~ 144 (221)
++++|... +..++ ++....++++++||++..| +.. +.+.+.+..
T Consensus 88 il~vk~~~-~~~v~-~~i~~~l~~~~~iv~~~nG--~~~~~~l~~~l~~ 132 (317)
T 2qyt_A 88 LFCTKDYD-MERGV-AEIRPMIGQNTKILPLLNG--ADIAERMRTYLPD 132 (317)
T ss_dssp EECCSSSC-HHHHH-HHHGGGEEEEEEEEECSCS--SSHHHHHTTTSCT
T ss_pred EEecCccc-HHHHH-HHHHhhcCCCCEEEEccCC--CCcHHHHHHHCCC
Confidence 99999543 33333 3445567788999999776 343 555555544
No 146
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=98.69 E-value=4.1e-08 Score=84.76 Aligned_cols=91 Identities=20% Similarity=0.193 Sum_probs=67.5
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCce-------------ecCCHHhhcCCCCEEEEeCCC
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAK-------------FEEDLDTMLPKCDIVVVNTPL 102 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~-------------~~~~l~ell~~aDvVv~~~p~ 102 (221)
.++|+|||+|.||..+|..|...|.+|.+++|. ...+...+.|.. ...++++ ++.+|+|++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~ 80 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA 80 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc
Confidence 478999999999999999999999999999984 233334444432 2346666 5889999999993
Q ss_pred ChhhhhcchHHHHhcCCCCCEEEEcCCC
Q 027577 103 TEKTRGMFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~lIn~srg 130 (221)
..+..++ ++....++++++||.+..|
T Consensus 81 -~~~~~~~-~~l~~~l~~~~~iv~~~nG 106 (335)
T 3ghy_A 81 -PALESVA-AGIAPLIGPGTCVVVAMNG 106 (335)
T ss_dssp -HHHHHHH-GGGSSSCCTTCEEEECCSS
T ss_pred -hhHHHHH-HHHHhhCCCCCEEEEECCC
Confidence 3444333 2344556789999999988
No 147
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.69 E-value=2.2e-08 Score=83.60 Aligned_cols=106 Identities=19% Similarity=0.170 Sum_probs=74.9
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhHH-HhcCceecCCHHhhcCCCCEEEEeCCCChhh-hhc
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLE-KETGAKFEEDLDTMLPKCDIVVVNTPLTEKT-RGM 109 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~-~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t-~~~ 109 (221)
.+.| +++|||.|.+|++++..|...|+ +|.++||+..+.+.. +..+....+++++.++++|+|+.++|..-.. ...
T Consensus 106 ~~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~~~~ 184 (253)
T 3u62_A 106 EVKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGEELP 184 (253)
T ss_dssp CCCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSCCCS
T ss_pred CCCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCCCCC
Confidence 4678 99999999999999999999998 899999975322211 1222233457778889999999999853211 123
Q ss_pred chHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhC
Q 027577 110 FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 145 (221)
Q Consensus 110 i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g 145 (221)
+..+. ++++.+++++.-+ .+.-+.++.+.|
T Consensus 185 i~~~~---l~~~~~V~Divy~---~T~ll~~A~~~G 214 (253)
T 3u62_A 185 VSDDS---LKNLSLVYDVIYF---DTPLVVKARKLG 214 (253)
T ss_dssp CCHHH---HTTCSEEEECSSS---CCHHHHHHHHHT
T ss_pred CCHHH---hCcCCEEEEeeCC---CcHHHHHHHHCC
Confidence 44333 5789999999988 455555566555
No 148
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=98.68 E-value=3.2e-08 Score=94.02 Aligned_cols=116 Identities=14% Similarity=0.096 Sum_probs=79.0
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh-----------cC-------------ceecCCHHhhcCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-----------TG-------------AKFEEDLDTMLPK 92 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-----------~g-------------~~~~~~l~ell~~ 92 (221)
++|+|||+|.||..+|..+...|++|++||+++...+.... .| +....++ +.+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 391 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFRD 391 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGTT
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHCC
Confidence 58999999999999999999999999999997533222110 11 2334566 56899
Q ss_pred CCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCC
Q 027577 93 CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWN 156 (221)
Q Consensus 93 aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~ 156 (221)
||+|+.++|.+.+.+..+-.+..+.++++++|++.+.+ +....+.+.+... -...++..|.
T Consensus 392 aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntSt--l~i~~la~~~~~p-~~~iG~hf~~ 452 (725)
T 2wtb_A 392 VDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTST--IDLNKIGERTKSQ-DRIVGAHFFS 452 (725)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHTTTCSCT-TTEEEEEECS
T ss_pred CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCC--CCHHHHHHHhcCC-CCEEEecCCC
Confidence 99999999977665555555666778999999655443 3334555544321 1335666554
No 149
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=98.66 E-value=8e-08 Score=82.48 Aligned_cols=106 Identities=16% Similarity=0.184 Sum_probs=71.7
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc-------------eecCCHHhhcCCCCEEEEe
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA-------------KFEEDLDTMLPKCDIVVVN 99 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~-------------~~~~~l~ell~~aDvVv~~ 99 (221)
....++|+|||.|.||..+|..|...|.+|.+| +++...+...+.|. ....++++ ++.+|+|+++
T Consensus 16 ~~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vila 93 (318)
T 3hwr_A 16 YFQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGADLVLFC 93 (318)
T ss_dssp ----CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCSEEEEC
T ss_pred hccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEEEE
Confidence 355789999999999999999999999999999 65433343333332 22345554 5889999999
Q ss_pred CCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHH
Q 027577 100 TPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACS 143 (221)
Q Consensus 100 ~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~ 143 (221)
+|.. .+..++ ++....++++++||++..|= -.++.+.+.+.
T Consensus 94 vk~~-~~~~~l-~~l~~~l~~~~~iv~~~nGi-~~~~~l~~~~~ 134 (318)
T 3hwr_A 94 VKST-DTQSAA-LAMKPALAKSALVLSLQNGV-ENADTLRSLLE 134 (318)
T ss_dssp CCGG-GHHHHH-HHHTTTSCTTCEEEEECSSS-SHHHHHHHHCC
T ss_pred cccc-cHHHHH-HHHHHhcCCCCEEEEeCCCC-CcHHHHHHHcC
Confidence 9943 444433 34556678899999997772 22345555553
No 150
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.65 E-value=6e-08 Score=84.63 Aligned_cols=93 Identities=9% Similarity=0.115 Sum_probs=69.1
Q ss_pred CCCCEEEEEccCHHHHHHHHHHc-cCC-CeEEEEcCCCCChhHHH-hc----C--ceecCCHHhhcCCCCEEEEeCCCCh
Q 027577 34 LEGKTVGTVGCGRIGKLLLQRLK-PFN-CNLLYHDRVKMDPQLEK-ET----G--AKFEEDLDTMLPKCDIVVVNTPLTE 104 (221)
Q Consensus 34 l~g~~vgIIG~G~iG~~iA~~l~-~~G-~~V~~~d~~~~~~~~~~-~~----g--~~~~~~l~ell~~aDvVv~~~p~~~ 104 (221)
...++|+|||+|.+|+.+++.+. ..+ .+|.+|||++...+.+. .. + +..+.+++++++++|+|++|+|...
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~ 206 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKA 206 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSS
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCC
Confidence 35789999999999999998874 334 57999999764433332 22 5 3456789999999999999999652
Q ss_pred hhhhcchHHHHhcCCCCCEEEEcCCC
Q 027577 105 KTRGMFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 105 ~t~~~i~~~~~~~mk~ga~lIn~srg 130 (221)
...++.. +.+++|+.+++++..
T Consensus 207 -~~pvl~~---~~l~~G~~V~~vgs~ 228 (350)
T 1x7d_A 207 -YATIITP---DMLEPGMHLNAVGGD 228 (350)
T ss_dssp -EEEEECG---GGCCTTCEEEECSCC
T ss_pred -CCceecH---HHcCCCCEEEECCCC
Confidence 2344543 467899999999864
No 151
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=98.65 E-value=1.9e-07 Score=79.78 Aligned_cols=108 Identities=16% Similarity=0.159 Sum_probs=75.7
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCce--------------ecCCHHhhcCCCCEEEEeCCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAK--------------FEEDLDTMLPKCDIVVVNTPL 102 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~--------------~~~~l~ell~~aDvVv~~~p~ 102 (221)
++|+|||.|.||..+|..|...|.+|.+++|+. .+...+.|+. ...+.++ ++.+|+|++++|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vilavk~ 79 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVGLKT 79 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEECCCG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEecCC
Confidence 689999999999999999999999999999965 3444444432 1234544 6789999999993
Q ss_pred ChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEE
Q 027577 103 TEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGY 150 (221)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a 150 (221)
. .+..+ -++....++++++||.+..| +-.++.+.+.+...++.+.
T Consensus 80 ~-~~~~~-l~~l~~~l~~~~~iv~l~nG-i~~~~~l~~~~~~~~v~~~ 124 (312)
T 3hn2_A 80 F-ANSRY-EELIRPLVEEGTQILTLQNG-LGNEEALATLFGAERIIGG 124 (312)
T ss_dssp G-GGGGH-HHHHGGGCCTTCEEEECCSS-SSHHHHHHHHTCGGGEEEE
T ss_pred C-CcHHH-HHHHHhhcCCCCEEEEecCC-CCcHHHHHHHCCCCcEEEE
Confidence 2 33333 34455668889999999877 2235667777765555433
No 152
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.61 E-value=2.1e-07 Score=71.40 Aligned_cols=98 Identities=16% Similarity=0.151 Sum_probs=64.7
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHH-hcCceec----CC---HHhh-cCCCCEEEEeCCC
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-ETGAKFE----ED---LDTM-LPKCDIVVVNTPL 102 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~~----~~---l~el-l~~aDvVv~~~p~ 102 (221)
....+++|.|+|+|.+|+.+++.|+..|++|+++|+++...+.+. ..|...+ .+ +.+. +..+|+|++++|.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~ 94 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTND 94 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSC
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCC
Confidence 356789999999999999999999999999999998765444443 4454322 12 2222 5679999999984
Q ss_pred ChhhhhcchHHHHhcCCCCCEEEEcCCCC
Q 027577 103 TEKTRGMFDKDRIAKMKKGVLIVNNARGA 131 (221)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~lIn~srg~ 131 (221)
...+. .-......+.+...+|-..++.
T Consensus 95 ~~~~~--~~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 95 DSTNF--FISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp HHHHH--HHHHHHHHTSCCSEEEEECSSG
T ss_pred cHHHH--HHHHHHHHHCCCCeEEEEECCH
Confidence 33322 1222344445556666655544
No 153
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.60 E-value=3e-08 Score=81.76 Aligned_cols=71 Identities=11% Similarity=0.160 Sum_probs=56.9
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHH
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDR 114 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~ 114 (221)
.-++|||||+|.||.++|+.|+..|++|.+|++. ++ +++|| ++++|.. ....++ .+.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~------------------~~-~~~aD--ilavP~~-ai~~vl-~~l 61 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP------------------ED-IRDFE--LVVIDAH-GVEGYV-EKL 61 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG------------------GG-GGGCS--EEEECSS-CHHHHH-HHH
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH------------------HH-hccCC--EEEEcHH-HHHHHH-HHH
Confidence 3479999999999999999999999999999972 12 46789 8889954 444444 456
Q ss_pred HhcCCCCCEEEEcC
Q 027577 115 IAKMKKGVLIVNNA 128 (221)
Q Consensus 115 ~~~mk~ga~lIn~s 128 (221)
...+++++++++++
T Consensus 62 ~~~l~~g~ivvd~s 75 (232)
T 3dfu_A 62 SAFARRGQMFLHTS 75 (232)
T ss_dssp HTTCCTTCEEEECC
T ss_pred HHhcCCCCEEEEEC
Confidence 66789999999985
No 154
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.60 E-value=3.2e-07 Score=78.87 Aligned_cols=89 Identities=21% Similarity=0.371 Sum_probs=68.8
Q ss_pred CCCEEEEEccCHHHHHHHHHHcc-CC-CeEEEEcCCCCChhHHHh----cCc--eecCCHHhhcCCCCEEEEeCCCChhh
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKP-FN-CNLLYHDRVKMDPQLEKE----TGA--KFEEDLDTMLPKCDIVVVNTPLTEKT 106 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~-~G-~~V~~~d~~~~~~~~~~~----~g~--~~~~~l~ell~~aDvVv~~~p~~~~t 106 (221)
..++++|||.|.||+.+++.+.. ++ .+|.+|||+ ...+.+++ .|+ ..+ +++++++++|+|++|+|..
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~-~~~eav~~aDIVi~aT~s~--- 194 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARMA-APADIAAQADIVVTATRST--- 194 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEEC-CHHHHHHHCSEEEECCCCS---
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEe-CHHHHHhhCCEEEEccCCC---
Confidence 47899999999999999999875 44 479999998 55444432 354 455 8999999999999999954
Q ss_pred hhcchHHHHhcCCCCCEEEEcCCCC
Q 027577 107 RGMFDKDRIAKMKKGVLIVNNARGA 131 (221)
Q Consensus 107 ~~~i~~~~~~~mk~ga~lIn~srg~ 131 (221)
..++.. +.+++|++|++++...
T Consensus 195 ~pvl~~---~~l~~G~~V~~vGs~~ 216 (313)
T 3hdj_A 195 TPLFAG---QALRAGAFVGAIGSSL 216 (313)
T ss_dssp SCSSCG---GGCCTTCEEEECCCSS
T ss_pred CcccCH---HHcCCCcEEEECCCCC
Confidence 345543 4589999999998653
No 155
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.59 E-value=7.4e-08 Score=69.55 Aligned_cols=89 Identities=20% Similarity=0.217 Sum_probs=60.9
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCC-CeEEEEcCCCCChhHHHhcCceec-------CCHHhhcCCCCEEEEeCCCChhh
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFN-CNLLYHDRVKMDPQLEKETGAKFE-------EDLDTMLPKCDIVVVNTPLTEKT 106 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G-~~V~~~d~~~~~~~~~~~~g~~~~-------~~l~ell~~aDvVv~~~p~~~~t 106 (221)
.+++|+|+|.|.||+.+++.|...| ++|+++++++...+.....++... .+++++++.+|+|+.++|... +
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~-~ 82 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFL-T 82 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGG-H
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchh-h
Confidence 4679999999999999999999999 899999997544333333343321 235567889999999998322 1
Q ss_pred hhcchHHHHhcCCCCCEEEEcC
Q 027577 107 RGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 107 ~~~i~~~~~~~mk~ga~lIn~s 128 (221)
..++ . ...+.|...++.+
T Consensus 83 ~~~~-~---~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 83 PIIA-K---AAKAAGAHYFDLT 100 (118)
T ss_dssp HHHH-H---HHHHTTCEEECCC
T ss_pred HHHH-H---HHHHhCCCEEEec
Confidence 1111 1 2234577777765
No 156
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=98.57 E-value=2e-07 Score=78.66 Aligned_cols=81 Identities=20% Similarity=0.286 Sum_probs=67.2
Q ss_pred ccCCCCCEEEEEccCHH-HHHHHHHHccC--CCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhh
Q 027577 31 AYDLEGKTVGTVGCGRI-GKLLLQRLKPF--NCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTR 107 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~i-G~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~ 107 (221)
+.++.|+++.|||.|.| |+.+|+.|... |.+|++++++. .++.+.+++||+|+.+++. .
T Consensus 153 ~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t--------------~~L~~~~~~ADIVI~Avg~----p 214 (281)
T 2c2x_A 153 DISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT--------------RDLPALTRQADIVVAAVGV----A 214 (281)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC--------------SCHHHHHTTCSEEEECSCC----T
T ss_pred CCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch--------------hHHHHHHhhCCEEEECCCC----C
Confidence 45799999999999985 99999999998 89999997642 4788999999999999982 2
Q ss_pred hcchHHHHhcCCCCCEEEEcCCCCc
Q 027577 108 GMFDKDRIAKMKKGVLIVNNARGAI 132 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn~srg~~ 132 (221)
+++..+. +|+|+++||++.-.+
T Consensus 215 ~~I~~~~---vk~GavVIDVgi~r~ 236 (281)
T 2c2x_A 215 HLLTADM---VRPGAAVIDVGVSRT 236 (281)
T ss_dssp TCBCGGG---SCTTCEEEECCEEEE
T ss_pred cccCHHH---cCCCcEEEEccCCCC
Confidence 3566555 589999999987554
No 157
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=98.56 E-value=1.9e-07 Score=78.93 Aligned_cols=80 Identities=23% Similarity=0.321 Sum_probs=66.5
Q ss_pred ccCCCCCEEEEEccCH-HHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhc
Q 027577 31 AYDLEGKTVGTVGCGR-IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGM 109 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~-iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~ 109 (221)
+.++.|+++.|||.|. +|+.+|..|...|++|.+++++. .++++.+++||+|+.+++. .++
T Consensus 156 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------~~L~~~~~~ADIVI~Avg~----p~~ 217 (285)
T 3l07_A 156 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT--------------TDLKSHTTKADILIVAVGK----PNF 217 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SSHHHHHTTCSEEEECCCC----TTC
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc--------------hhHHHhcccCCEEEECCCC----CCC
Confidence 3579999999999988 69999999999999999987631 3788999999999999982 335
Q ss_pred chHHHHhcCCCCCEEEEcCCCC
Q 027577 110 FDKDRIAKMKKGVLIVNNARGA 131 (221)
Q Consensus 110 i~~~~~~~mk~ga~lIn~srg~ 131 (221)
+..+. +|+|+++||++.-.
T Consensus 218 I~~~~---vk~GavVIDvgi~~ 236 (285)
T 3l07_A 218 ITADM---VKEGAVVIDVGINH 236 (285)
T ss_dssp BCGGG---SCTTCEEEECCCEE
T ss_pred CCHHH---cCCCcEEEEecccC
Confidence 65544 59999999998654
No 158
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.55 E-value=2e-07 Score=78.81 Aligned_cols=81 Identities=21% Similarity=0.361 Sum_probs=67.4
Q ss_pred ccCCCCCEEEEEccCH-HHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhc
Q 027577 31 AYDLEGKTVGTVGCGR-IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGM 109 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~-iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~ 109 (221)
+.++.|+++.|||.|. +|+.+|..|...|++|.+++++. .++++.+++||+|+.+++. .++
T Consensus 155 ~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t--------------~~L~~~~~~ADIVI~Avg~----p~~ 216 (285)
T 3p2o_A 155 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT--------------KDLSLYTRQADLIIVAAGC----VNL 216 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SCHHHHHTTCSEEEECSSC----TTC
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc--------------hhHHHHhhcCCEEEECCCC----CCc
Confidence 4579999999999988 69999999999999999998632 3788999999999999982 335
Q ss_pred chHHHHhcCCCCCEEEEcCCCCc
Q 027577 110 FDKDRIAKMKKGVLIVNNARGAI 132 (221)
Q Consensus 110 i~~~~~~~mk~ga~lIn~srg~~ 132 (221)
+..+. +|+|+++||++.-.+
T Consensus 217 I~~~~---vk~GavVIDVgi~~~ 236 (285)
T 3p2o_A 217 LRSDM---VKEGVIVVDVGINRL 236 (285)
T ss_dssp BCGGG---SCTTEEEEECCCEEC
T ss_pred CCHHH---cCCCeEEEEeccCcc
Confidence 66544 599999999987553
No 159
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.54 E-value=1.2e-07 Score=83.19 Aligned_cols=109 Identities=17% Similarity=0.094 Sum_probs=74.6
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc-e-----ecCCHHhhcCCCCEEEEeCCCChhh
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA-K-----FEEDLDTMLPKCDIVVVNTPLTEKT 106 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~-~-----~~~~l~ell~~aDvVv~~~p~~~~t 106 (221)
+=.+++|+|||+|.||+.+++.|... .+|.++||+....+.+.+... . ..++++++++++|+|+.|+|....
T Consensus 13 ~~~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~~- 90 (365)
T 2z2v_A 13 EGRHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLG- 90 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHHH-
T ss_pred cCCCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhhh-
Confidence 45689999999999999999999887 899999997543333222111 1 124567889999999999983221
Q ss_pred hhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 107 RGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 107 ~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
.-+ ....++.|..+++++-- .-+..+|.+..++..+.
T Consensus 91 -~~v---~~a~l~~G~~~vD~s~~-~~~~~~l~~~Ak~aG~~ 127 (365)
T 2z2v_A 91 -FKS---IKAAIKSKVDMVDVSFM-PENPLELRDEAEKAQVT 127 (365)
T ss_dssp -HHH---HHHHHHTTCCEEECCCC-SSCGGGGHHHHHHTTCE
T ss_pred -HHH---HHHHHHhCCeEEEccCC-cHHHHHHHHHHHHcCCE
Confidence 112 23456789999998853 34455777777776665
No 160
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=98.54 E-value=1.4e-07 Score=80.23 Aligned_cols=80 Identities=19% Similarity=0.257 Sum_probs=65.7
Q ss_pred ccCCCCCEEEEEccCH-HHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHH--hhcCCCCEEEEeCCCChhhh
Q 027577 31 AYDLEGKTVGTVGCGR-IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLD--TMLPKCDIVVVNTPLTEKTR 107 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~-iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~--ell~~aDvVv~~~p~~~~t~ 107 (221)
+.++.|+++.|||.|. +|+.+|..|...|++|.+++++.. +++ +.+++||+|+.+++. .
T Consensus 160 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~--------------~l~l~~~~~~ADIVI~Avg~----p 221 (300)
T 4a26_A 160 GIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS--------------TEDMIDYLRTADIVIAAMGQ----P 221 (300)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC--------------HHHHHHHHHTCSEEEECSCC----T
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC--------------CchhhhhhccCCEEEECCCC----C
Confidence 3579999999999987 799999999999999999987321 345 889999999999983 2
Q ss_pred hcchHHHHhcCCCCCEEEEcCCCC
Q 027577 108 GMFDKDRIAKMKKGVLIVNNARGA 131 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn~srg~ 131 (221)
+++..+. +|+|+++||++.-.
T Consensus 222 ~~I~~~~---vk~GavVIDvgi~~ 242 (300)
T 4a26_A 222 GYVKGEW---IKEGAAVVDVGTTP 242 (300)
T ss_dssp TCBCGGG---SCTTCEEEECCCEE
T ss_pred CCCcHHh---cCCCcEEEEEeccC
Confidence 3565544 69999999998654
No 161
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.54 E-value=4.6e-07 Score=67.27 Aligned_cols=90 Identities=18% Similarity=0.106 Sum_probs=59.4
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHH-hcCceec----CCHHh----hcCCCCEEEEeCCCChhh
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-ETGAKFE----EDLDT----MLPKCDIVVVNTPLTEKT 106 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~~----~~l~e----ll~~aDvVv~~~p~~~~t 106 (221)
+++|+|+|+|.+|+.+++.|...|++|.++|+++...+... ..++... .+.+. .++++|+|++++|....+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~ 83 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 83 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHH
Confidence 57999999999999999999999999999998653333333 2354321 12222 257899999999854322
Q ss_pred hhcchHHHHhcCCCCCEEEEc
Q 027577 107 RGMFDKDRIAKMKKGVLIVNN 127 (221)
Q Consensus 107 ~~~i~~~~~~~mk~ga~lIn~ 127 (221)
. .-......++++.+++-+
T Consensus 84 ~--~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 84 L--MSSLLAKSYGINKTIARI 102 (140)
T ss_dssp H--HHHHHHHHTTCCCEEEEC
T ss_pred H--HHHHHHHHcCCCEEEEEe
Confidence 2 222344556777666543
No 162
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=98.53 E-value=1.5e-07 Score=79.66 Aligned_cols=81 Identities=17% Similarity=0.352 Sum_probs=67.3
Q ss_pred ccCCCCCEEEEEccCH-HHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhc
Q 027577 31 AYDLEGKTVGTVGCGR-IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGM 109 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~-iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~ 109 (221)
+.++.|+++.|||.|. +|+.+|+.|...|++|.+++++. .++.+.+++||+|+.+++. .++
T Consensus 154 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------~~L~~~~~~ADIVI~Avg~----p~l 215 (288)
T 1b0a_A 154 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT--------------KNLRHHVENADLLIVAVGK----PGF 215 (288)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC--------------SCHHHHHHHCSEEEECSCC----TTC
T ss_pred CCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc--------------hhHHHHhccCCEEEECCCC----cCc
Confidence 4579999999999997 59999999999999999998532 4788899999999999982 235
Q ss_pred chHHHHhcCCCCCEEEEcCCCCc
Q 027577 110 FDKDRIAKMKKGVLIVNNARGAI 132 (221)
Q Consensus 110 i~~~~~~~mk~ga~lIn~srg~~ 132 (221)
+..+. +|+|+++||++.-.+
T Consensus 216 I~~~~---vk~GavVIDVgi~r~ 235 (288)
T 1b0a_A 216 IPGDW---IKEGAIVIDVGINRL 235 (288)
T ss_dssp BCTTT---SCTTCEEEECCCEEC
T ss_pred CCHHH---cCCCcEEEEccCCcc
Confidence 66544 589999999997553
No 163
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=98.52 E-value=3.4e-07 Score=77.89 Aligned_cols=82 Identities=21% Similarity=0.270 Sum_probs=67.4
Q ss_pred ccCCCCCEEEEEccCH-HHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhc
Q 027577 31 AYDLEGKTVGTVGCGR-IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGM 109 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~-iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~ 109 (221)
+.++.|+++.|||.|. +|+.+|+.|...|++|.+++++ ..++++.+++||+||.+++. .++
T Consensus 160 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~--------------t~~L~~~~~~ADIVI~Avg~----p~~ 221 (301)
T 1a4i_A 160 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK--------------TAHLDEEVNKGDILVVATGQ----PEM 221 (301)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------CSSHHHHHTTCSEEEECCCC----TTC
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC--------------cccHHHHhccCCEEEECCCC----ccc
Confidence 4579999999999996 6999999999999999999753 24788999999999999983 235
Q ss_pred chHHHHhcCCCCCEEEEcCCCCcc
Q 027577 110 FDKDRIAKMKKGVLIVNNARGAIM 133 (221)
Q Consensus 110 i~~~~~~~mk~ga~lIn~srg~~v 133 (221)
+..+. +|+|+++||++.-.+-
T Consensus 222 I~~~~---vk~GavVIDVgi~~~~ 242 (301)
T 1a4i_A 222 VKGEW---IKPGAIVIDCGINYVP 242 (301)
T ss_dssp BCGGG---SCTTCEEEECCCBC--
T ss_pred CCHHH---cCCCcEEEEccCCCcc
Confidence 66555 5899999999986543
No 164
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=98.52 E-value=1.7e-07 Score=78.91 Aligned_cols=77 Identities=19% Similarity=0.269 Sum_probs=65.1
Q ss_pred CCCCEEEEEccCH-HHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchH
Q 027577 34 LEGKTVGTVGCGR-IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK 112 (221)
Q Consensus 34 l~g~~vgIIG~G~-iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~ 112 (221)
+.|+++.|||.|. +|+.+|+.|...|++|++++++ ..++++.+++||+|+.+++. .+++..
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~--------------t~~L~~~~~~ADIVI~Avg~----p~~I~~ 209 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK--------------TKDIGSMTRSSKIVVVAVGR----PGFLNR 209 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------CSCHHHHHHHSSEEEECSSC----TTCBCG
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC--------------cccHHHhhccCCEEEECCCC----CccccH
Confidence 8999999999986 8999999999999999999863 14788999999999999983 235665
Q ss_pred HHHhcCCCCCEEEEcCCCC
Q 027577 113 DRIAKMKKGVLIVNNARGA 131 (221)
Q Consensus 113 ~~~~~mk~ga~lIn~srg~ 131 (221)
+. +|+|+++||++.-.
T Consensus 210 ~~---vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 210 EM---VTPGSVVIDVGINY 225 (276)
T ss_dssp GG---CCTTCEEEECCCEE
T ss_pred hh---ccCCcEEEEeccCc
Confidence 44 59999999998654
No 165
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.52 E-value=1.8e-07 Score=70.62 Aligned_cols=91 Identities=16% Similarity=0.208 Sum_probs=63.6
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec----CCH---Hhh-cCCCCEEEEeCCCChhhh
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----EDL---DTM-LPKCDIVVVNTPLTEKTR 107 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~----~~l---~el-l~~aDvVv~~~p~~~~t~ 107 (221)
.++|.|+|+|.+|+.+|+.|...|++|+++|+++...+.+.+.|+..+ .+. +++ +.++|+|++++|....+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~ 86 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAG 86 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHH
Confidence 357999999999999999999999999999997655555555666432 122 221 468999999999655554
Q ss_pred hcchHHHHhcCCCCCEEEEcC
Q 027577 108 GMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn~s 128 (221)
.+. ..+..+.++..+|-..
T Consensus 87 ~~~--~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 87 EIV--ASARAKNPDIEIIARA 105 (140)
T ss_dssp HHH--HHHHHHCSSSEEEEEE
T ss_pred HHH--HHHHHHCCCCeEEEEE
Confidence 332 2445556666666543
No 166
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=98.50 E-value=3.5e-07 Score=77.32 Aligned_cols=81 Identities=22% Similarity=0.388 Sum_probs=67.0
Q ss_pred ccCCCCCEEEEEccCH-HHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhc
Q 027577 31 AYDLEGKTVGTVGCGR-IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGM 109 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~-iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~ 109 (221)
+.++.||++.|||.|. +|+.+|..|...|++|.+++++. .++++.+++||+|+.+++. .++
T Consensus 156 ~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T--------------~~L~~~~~~ADIVI~Avg~----p~~ 217 (286)
T 4a5o_A 156 GADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT--------------RDLADHVSRADLVVVAAGK----PGL 217 (286)
T ss_dssp TCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC--------------SCHHHHHHTCSEEEECCCC----TTC
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC--------------cCHHHHhccCCEEEECCCC----CCC
Confidence 4579999999999987 79999999999999999987632 3688889999999999982 345
Q ss_pred chHHHHhcCCCCCEEEEcCCCCc
Q 027577 110 FDKDRIAKMKKGVLIVNNARGAI 132 (221)
Q Consensus 110 i~~~~~~~mk~ga~lIn~srg~~ 132 (221)
+..+. +|+|+++||++.-.+
T Consensus 218 I~~~~---vk~GavVIDvgi~~~ 237 (286)
T 4a5o_A 218 VKGEW---IKEGAIVIDVGINRQ 237 (286)
T ss_dssp BCGGG---SCTTCEEEECCSCSS
T ss_pred CCHHH---cCCCeEEEEeccccc
Confidence 66544 599999999987553
No 167
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=98.49 E-value=2.5e-07 Score=81.65 Aligned_cols=89 Identities=15% Similarity=0.122 Sum_probs=62.8
Q ss_pred CEEEEEccCHHHHHHHHHHcc-CCCeEEEEc---CCCCChhH-HHhcC------------c-------eecCCHHhhcCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKP-FNCNLLYHD---RVKMDPQL-EKETG------------A-------KFEEDLDTMLPK 92 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~-~G~~V~~~d---~~~~~~~~-~~~~g------------~-------~~~~~l~ell~~ 92 (221)
++|+|||.|.||..+|..|.. .|++|.+|+ +++...+. ....+ . ....+++++++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISG 82 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHTT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhCC
Confidence 589999999999999999977 599999999 53222222 12211 1 134578888899
Q ss_pred CCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEc
Q 027577 93 CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNN 127 (221)
Q Consensus 93 aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~ 127 (221)
+|+|++++|.. ....++ ++....++++++|++.
T Consensus 83 aD~Vilav~~~-~~~~v~-~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 83 ADVVILTVPAF-AHEGYF-QAMAPYVQDSALIVGL 115 (404)
T ss_dssp CSEEEECSCGG-GHHHHH-HHHTTTCCTTCEEEET
T ss_pred CCEEEEeCchH-HHHHHH-HHHHhhCCCCcEEEEc
Confidence 99999999933 333333 3455567889999985
No 168
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=98.49 E-value=6.9e-08 Score=83.10 Aligned_cols=94 Identities=19% Similarity=0.188 Sum_probs=68.1
Q ss_pred ccCCCCCEEEEEccCHH-HHHHHHHHccCCCeEEEEcCCCCC-hhHHHhcC---cee-----c--CCHHhhcCCCCEEEE
Q 027577 31 AYDLEGKTVGTVGCGRI-GKLLLQRLKPFNCNLLYHDRVKMD-PQLEKETG---AKF-----E--EDLDTMLPKCDIVVV 98 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~i-G~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~~g---~~~-----~--~~l~ell~~aDvVv~ 98 (221)
+.++.|+++.|||.|.| |+.+|+.|...|.+|.++||+... .+.....+ ... . .++++.+++||+||.
T Consensus 172 g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIs 251 (320)
T 1edz_A 172 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT 251 (320)
T ss_dssp TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEE
Confidence 44799999999999975 999999999999999999886210 00001111 111 1 478899999999999
Q ss_pred eCCCChhhhhcchHHHHhcCCCCCEEEEcCCC
Q 027577 99 NTPLTEKTRGMFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 99 ~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg 130 (221)
+++. + ..++..+. +|+|+++||++.-
T Consensus 252 Atg~-p--~~vI~~e~---vk~GavVIDVgi~ 277 (320)
T 1edz_A 252 GVPS-E--NYKFPTEY---IKEGAVCINFACT 277 (320)
T ss_dssp CCCC-T--TCCBCTTT---SCTTEEEEECSSS
T ss_pred CCCC-C--cceeCHHH---cCCCeEEEEcCCC
Confidence 9983 1 22366544 5899999999764
No 169
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.48 E-value=5.1e-07 Score=77.75 Aligned_cols=88 Identities=18% Similarity=0.294 Sum_probs=65.9
Q ss_pred CCCEEEEEccCHHHHHHHHHHcc-CC-CeEEEEcCCCCChhHHH-hc-----CceecCCHHhhcCCCCEEEEeCCCChhh
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKP-FN-CNLLYHDRVKMDPQLEK-ET-----GAKFEEDLDTMLPKCDIVVVNTPLTEKT 106 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~-~G-~~V~~~d~~~~~~~~~~-~~-----g~~~~~~l~ell~~aDvVv~~~p~~~~t 106 (221)
..++++|||+|.+|+.+++.+.. .+ .+|.+|||++...+.+. .. .+. +.++++++ ++|+|++|+|...
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~~~e~v-~aDvVi~aTp~~~-- 199 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQPAEEAS-RCDVLVTTTPSRK-- 199 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECCHHHHT-SSSEEEECCCCSS--
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECCHHHHh-CCCEEEEeeCCCC--
Confidence 57899999999999999998875 33 57999999764433322 21 244 67899999 9999999999542
Q ss_pred hhcchHHHHhcCCCCCEEEEcCCC
Q 027577 107 RGMFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 107 ~~~i~~~~~~~mk~ga~lIn~srg 130 (221)
.++.. +.+++|+.+++++..
T Consensus 200 -pv~~~---~~l~~G~~V~~ig~~ 219 (322)
T 1omo_A 200 -PVVKA---EWVEEGTHINAIGAD 219 (322)
T ss_dssp -CCBCG---GGCCTTCEEEECSCC
T ss_pred -ceecH---HHcCCCeEEEECCCC
Confidence 44432 468899999999643
No 170
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.46 E-value=5.1e-07 Score=76.77 Aligned_cols=108 Identities=11% Similarity=0.212 Sum_probs=72.4
Q ss_pred CCEEEEEccCHHHHH-HHHHHcc-CCCeEE-EEcCCCCChh-HHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcch
Q 027577 36 GKTVGTVGCGRIGKL-LLQRLKP-FNCNLL-YHDRVKMDPQ-LEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 111 (221)
Q Consensus 36 g~~vgIIG~G~iG~~-iA~~l~~-~G~~V~-~~d~~~~~~~-~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~ 111 (221)
-.+|||||+|.||+. +++.++. -++++. ++|+++...+ .++..|+..+.+++++++++|+|++|+|..... -+
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~~h~--~~- 82 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTETHY--EI- 82 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGGGHH--HH-
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcHhHH--HH-
Confidence 468999999999996 8888876 467866 6888654333 344567766789999999999999999933221 12
Q ss_pred HHHHhcCCCCCEEEE--cCCCCccCHHHHHHHHHhCCce
Q 027577 112 KDRIAKMKKGVLIVN--NARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 112 ~~~~~~mk~ga~lIn--~srg~~vd~~al~~al~~g~i~ 148 (221)
....++.|..++. ...-.+-+.++|.++.++.++.
T Consensus 83 --~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~ 119 (308)
T 3uuw_A 83 --IKILLNLGVHVYVDKPLASTVSQGEELIELSTKKNLN 119 (308)
T ss_dssp --HHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCC
T ss_pred --HHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCE
Confidence 2233455555543 2223344456677777765554
No 171
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=98.45 E-value=3.8e-07 Score=78.52 Aligned_cols=136 Identities=10% Similarity=-0.007 Sum_probs=93.0
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHH-----------Hhc--------------CceecCCHHhhc
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLE-----------KET--------------GAKFEEDLDTML 90 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~-----------~~~--------------g~~~~~~l~ell 90 (221)
-.+|+|||.|.||+.+|..+...|++|.+||+++...+.. .+. .+....++++.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a~ 85 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhHh
Confidence 5689999999999999999999999999999875321110 000 123456888999
Q ss_pred CCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCCC
Q 027577 91 PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMP 170 (221)
Q Consensus 91 ~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~~~~~~l~~~~ 170 (221)
++||+|+=++|-+.+.+.-+-++.=+.++++++|-..+++ +....|.+.+.. .=+..++-.|. |.+ --||.+
T Consensus 86 ~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs--l~is~ia~~~~~-p~r~ig~HffN--P~~-~m~LVE-- 157 (319)
T 3ado_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVN--PPY-YIPLVE-- 157 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECS--STT-TCCEEE--
T ss_pred ccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhh--ccchhhhhhccC-CCcEEEecCCC--Ccc-ccchHH--
Confidence 9999999999977777776666777778999998665555 455677666543 23334555443 321 123433
Q ss_pred CeEECCCCCc
Q 027577 171 NQAMTPHVSG 180 (221)
Q Consensus 171 n~~~tPH~a~ 180 (221)
|+-+|+++-
T Consensus 158 -iv~g~~Ts~ 166 (319)
T 3ado_A 158 -LVPHPETSP 166 (319)
T ss_dssp -EEECTTCCH
T ss_pred -hcCCCCCcH
Confidence 566666553
No 172
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.42 E-value=4.9e-07 Score=78.77 Aligned_cols=67 Identities=22% Similarity=0.306 Sum_probs=54.5
Q ss_pred CCEEEEEccCHHHHHHHHHHccC-CCeEE-EEcCCCCChhHHHhcCceecCCHHhhcC--CCCEEEEeCCC
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPL 102 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~g~~~~~~l~ell~--~aDvVv~~~p~ 102 (221)
-.+|||||+|.||+..++.++.. ++++. ++|+++...+.++..|+..+.+++++++ +.|+|++|+|.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~ 75 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPN 75 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCG
T ss_pred cCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCc
Confidence 35899999999999999999876 67765 5788654444555678887889999997 79999999994
No 173
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.42 E-value=5.7e-07 Score=67.50 Aligned_cols=90 Identities=17% Similarity=0.119 Sum_probs=58.2
Q ss_pred CCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec----CCHH---hh-cCCCCEEEEeCCCChh
Q 027577 34 LEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----EDLD---TM-LPKCDIVVVNTPLTEK 105 (221)
Q Consensus 34 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~----~~l~---el-l~~aDvVv~~~p~~~~ 105 (221)
...++|.|+|+|.+|+.+|+.|...|++|+++|+++...+.+...++... .+.+ ++ +.++|+|++++|..+.
T Consensus 4 ~~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (141)
T 3llv_A 4 NGRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEF 83 (141)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHH
Confidence 34678999999999999999999999999999987644444444454321 2222 22 4689999999983332
Q ss_pred hhhcchHHHHhcCCCCCEEE
Q 027577 106 TRGMFDKDRIAKMKKGVLIV 125 (221)
Q Consensus 106 t~~~i~~~~~~~mk~ga~lI 125 (221)
+ +......+.+....+++
T Consensus 84 n--~~~~~~a~~~~~~~iia 101 (141)
T 3llv_A 84 N--LKILKALRSVSDVYAIV 101 (141)
T ss_dssp H--HHHHHHHHHHCCCCEEE
T ss_pred H--HHHHHHHHHhCCceEEE
Confidence 2 22233344444333444
No 174
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.41 E-value=2.7e-07 Score=68.78 Aligned_cols=96 Identities=13% Similarity=0.180 Sum_probs=59.2
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec----CCHH---hh-cCCCCEEEEeCCCCh
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----EDLD---TM-LPKCDIVVVNTPLTE 104 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~----~~l~---el-l~~aDvVv~~~p~~~ 104 (221)
.+.+++|.|+|+|.+|+.+++.|...|++|+++|+++...+.+...+.... .+.+ ++ +.++|+|+.+++...
T Consensus 3 ~~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~ 82 (144)
T 2hmt_A 3 RIKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANI 82 (144)
T ss_dssp ---CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCH
T ss_pred CCcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCch
Confidence 356788999999999999999999999999999986432222223333211 2222 22 567999999998542
Q ss_pred hhhhcchHHHHhcCCCCCEEEEcCCC
Q 027577 105 KTRGMFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 105 ~t~~~i~~~~~~~mk~ga~lIn~srg 130 (221)
+.. ..-......+.+. .+|..+.+
T Consensus 83 ~~~-~~~~~~~~~~~~~-~ii~~~~~ 106 (144)
T 2hmt_A 83 QAS-TLTTLLLKELDIP-NIWVKAQN 106 (144)
T ss_dssp HHH-HHHHHHHHHTTCS-EEEEECCS
T ss_pred HHH-HHHHHHHHHcCCC-eEEEEeCC
Confidence 222 1222334445665 55544443
No 175
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=98.41 E-value=4.3e-07 Score=77.52 Aligned_cols=107 Identities=16% Similarity=0.223 Sum_probs=67.8
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCC----------HHhhcCCCCEEEEeCCCChh
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEED----------LDTMLPKCDIVVVNTPLTEK 105 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~----------l~ell~~aDvVv~~~p~~~~ 105 (221)
.++|+|||.|.||..+|..|. .|.+|.+++|+....+...+.|+....+ -++....+|+|++++|. ..
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~-~~ 79 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQ-HQ 79 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCG-GG
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCH-HH
Confidence 379999999999999999999 8999999998653334444445432210 02456789999999983 22
Q ss_pred hhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 106 TRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 106 t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
+..++ +.++.+.+++ ||.+..|=- .++.+.+.+...++.
T Consensus 80 ~~~~l--~~l~~~~~~~-ivs~~nGi~-~~e~l~~~~~~~~vl 118 (307)
T 3ego_A 80 LQSVF--SSLERIGKTN-ILFLQNGMG-HIHDLKDWHVGHSIY 118 (307)
T ss_dssp HHHHH--HHTTSSCCCE-EEECCSSSH-HHHHHHTCCCSCEEE
T ss_pred HHHHH--HHhhcCCCCe-EEEecCCcc-HHHHHHHhCCCCcEE
Confidence 33333 2233345566 888877632 233444444444443
No 176
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=98.40 E-value=5.2e-07 Score=75.80 Aligned_cols=71 Identities=18% Similarity=0.188 Sum_probs=52.0
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChh-HHHhcC----ceecCCHHhhcC-CCCEEEEeCCCC
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQ-LEKETG----AKFEEDLDTMLP-KCDIVVVNTPLT 103 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~-~~~~~g----~~~~~~l~ell~-~aDvVv~~~p~~ 103 (221)
.++.+++++|+|.|.+|++++..|...|.+|.+++|+....+ .++..+ +.. .+++++.+ ++|+||.++|..
T Consensus 115 ~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~~~~~~~~DivIn~t~~~ 191 (272)
T 1p77_A 115 WLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQA-VSMDSIPLQTYDLVINATSAG 191 (272)
T ss_dssp CCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEE-EEGGGCCCSCCSEEEECCCC-
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEE-eeHHHhccCCCCEEEECCCCC
Confidence 467899999999999999999999999999999999753322 222221 222 24445444 899999999954
No 177
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.39 E-value=8.7e-07 Score=76.07 Aligned_cols=106 Identities=19% Similarity=0.249 Sum_probs=69.0
Q ss_pred CEEEEEccCHHHHHHHHHHccC-CCeEE-EEcCCCCChh-HHHhcCceecCCHHhhcC--CCCEEEEeCCCChhhhhcch
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQ-LEKETGAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGMFD 111 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~-G~~V~-~~d~~~~~~~-~~~~~g~~~~~~l~ell~--~aDvVv~~~p~~~~t~~~i~ 111 (221)
.+|||||+|.||+.+++.+... ++++. ++|+++...+ .++..++. +.+++++++ ++|+|++|+|..... -+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~D~V~i~tp~~~h~--~~- 79 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE-VRTIDAIEAAADIDAVVICTPTDTHA--DL- 79 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE-ECCHHHHHHCTTCCEEEECSCGGGHH--HH-
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC-cCCHHHHhcCCCCCEEEEeCCchhHH--HH-
Confidence 5899999999999999999875 77866 6888654332 34556787 789999997 799999999943222 12
Q ss_pred HHHHhcCCCCCEEEEc--CCCCccCHHHHHHHHHhCCce
Q 027577 112 KDRIAKMKKGVLIVNN--ARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 112 ~~~~~~mk~ga~lIn~--srg~~vd~~al~~al~~g~i~ 148 (221)
....++.|..++.- ..-.+-+.+.|.++.++.++.
T Consensus 80 --~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~ 116 (331)
T 4hkt_A 80 --IERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAK 116 (331)
T ss_dssp --HHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCC
T ss_pred --HHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCe
Confidence 22234445444431 122333444566666655544
No 178
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.39 E-value=7e-07 Score=76.56 Aligned_cols=105 Identities=11% Similarity=0.179 Sum_probs=68.3
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhHH-----Hh-------cCceecCCHHhhcCCCCEEEEeCCC
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLE-----KE-------TGAKFEEDLDTMLPKCDIVVVNTPL 102 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~-----~~-------~g~~~~~~l~ell~~aDvVv~~~p~ 102 (221)
.++|+|||.|.||..+|..+...|+ +|.+||+++...+.. .. ..+....++ +.+++||+|+++++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg~ 82 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITASI 82 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 4689999999999999999988888 999999976433221 00 123333566 778999999999842
Q ss_pred Ch-----------hhhhc---chHHHHhcCCCCCEEEEcCCCCccCHHHHHHHH
Q 027577 103 TE-----------KTRGM---FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDAC 142 (221)
Q Consensus 103 ~~-----------~t~~~---i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al 142 (221)
.. ++..+ +-++ +....+++++++++...-+....+.+..
T Consensus 83 p~~~g~~r~d~~~~~~~i~~~i~~~-i~~~~~~~iii~~sNp~~~~~~~~~~~~ 135 (317)
T 2ewd_A 83 PGRPKDDRSELLFGNARILDSVAEG-VKKYCPNAFVICITNPLDVMVSHFQKVS 135 (317)
T ss_dssp SSCCSSCGGGGHHHHHHHHHHHHHH-HHHHCTTSEEEECCSSHHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHhhHHHHHHHHHH-HHHHCCCcEEEEeCChHHHHHHHHHHhh
Confidence 11 11111 1122 2223579999999875444444555544
No 179
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=98.39 E-value=7.3e-08 Score=81.72 Aligned_cols=94 Identities=12% Similarity=0.071 Sum_probs=64.5
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc---eecCCHHhhc-CCCCEEEEeCCCChhhhhcchH
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA---KFEEDLDTML-PKCDIVVVNTPLTEKTRGMFDK 112 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~---~~~~~l~ell-~~aDvVv~~~p~~~~t~~~i~~ 112 (221)
++|+|||.|.||..+|..|...|.+|.+++|+....+.....|. ....+..+.+ +.+|+|++++|.. .+..++ +
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~-~~~~~l-~ 80 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTH-QLDAVI-P 80 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGG-GHHHHG-G
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCcc-CHHHHH-H
Confidence 68999999999999999999889999999987532222112231 1112334444 8899999999933 334333 2
Q ss_pred HHHhcCCCCCEEEEcCCCCc
Q 027577 113 DRIAKMKKGVLIVNNARGAI 132 (221)
Q Consensus 113 ~~~~~mk~ga~lIn~srg~~ 132 (221)
+....++++++||.+..|=-
T Consensus 81 ~l~~~l~~~~~iv~~~nGi~ 100 (294)
T 3g17_A 81 HLTYLAHEDTLIILAQNGYG 100 (294)
T ss_dssp GHHHHEEEEEEEEECCSSCC
T ss_pred HHHHhhCCCCEEEEeccCcc
Confidence 34445678889999988743
No 180
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.39 E-value=7.9e-07 Score=76.73 Aligned_cols=66 Identities=23% Similarity=0.369 Sum_probs=53.2
Q ss_pred CEEEEEccCHHHHHHHHHHccC-CCeEE-EEcCCCCChh-HHHhcCceecCCHHhhcC--CCCEEEEeCCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQ-LEKETGAKFEEDLDTMLP--KCDIVVVNTPL 102 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~-G~~V~-~~d~~~~~~~-~~~~~g~~~~~~l~ell~--~aDvVv~~~p~ 102 (221)
.+|||||+|.||+.+++.+... ++++. ++|+++...+ .++..|+..+.+++++++ ++|+|++|+|.
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~ 75 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPT 75 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCG
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCc
Confidence 4899999999999999999876 67765 6888653332 344567777889999998 89999999994
No 181
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.38 E-value=8.1e-07 Score=77.00 Aligned_cols=67 Identities=15% Similarity=0.299 Sum_probs=53.7
Q ss_pred CEEEEEccCHHHHHHHHHHccC-CCeEE-EEcCCCCChh-HHHhcCceecCCHHhhc--CCCCEEEEeCCCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQ-LEKETGAKFEEDLDTML--PKCDIVVVNTPLT 103 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~-G~~V~-~~d~~~~~~~-~~~~~g~~~~~~l~ell--~~aDvVv~~~p~~ 103 (221)
.+|||||+|.||+.+++.++.. ++++. ++|+++...+ .++..|+..+.++++++ .++|+|++|+|..
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~ 77 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPND 77 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTT
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChH
Confidence 5899999999999999999877 78855 6788654333 33456777788999999 6799999999953
No 182
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=98.38 E-value=5.4e-07 Score=76.27 Aligned_cols=96 Identities=15% Similarity=0.197 Sum_probs=64.8
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChh-HHHhcC----ceecCCHHhhcCCCCEEEEeCCCCh
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQ-LEKETG----AKFEEDLDTMLPKCDIVVVNTPLTE 104 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~-~~~~~g----~~~~~~l~ell~~aDvVv~~~p~~~ 104 (221)
+.++.|+++.|+|.|.+|++++..|...|+ +|.+++|+....+ .++..+ +... +++++.+++|+||.++|...
T Consensus 121 ~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~-~~~~l~~~aDiIInaTp~gm 199 (281)
T 3o8q_A 121 QVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQ-AFEQLKQSYDVIINSTSASL 199 (281)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEE-EGGGCCSCEEEEEECSCCCC
T ss_pred CCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEe-eHHHhcCCCCEEEEcCcCCC
Confidence 346889999999999999999999999997 8999999753322 222222 2322 56666688999999999543
Q ss_pred hhh-hcchHHHHhcCCCCCEEEEcCCC
Q 027577 105 KTR-GMFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 105 ~t~-~~i~~~~~~~mk~ga~lIn~srg 130 (221)
... ..+.. +.++++++++|+.-.
T Consensus 200 ~~~~~~l~~---~~l~~~~~V~DlvY~ 223 (281)
T 3o8q_A 200 DGELPAIDP---VIFSSRSVCYDMMYG 223 (281)
T ss_dssp ----CSCCG---GGEEEEEEEEESCCC
T ss_pred CCCCCCCCH---HHhCcCCEEEEecCC
Confidence 211 11222 235566666666544
No 183
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.38 E-value=2.1e-06 Score=73.27 Aligned_cols=107 Identities=17% Similarity=0.274 Sum_probs=72.1
Q ss_pred CEEEEEccCHHHHH-HHHHHcc-CCCeEE-EEcCCCCChhH-HHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchH
Q 027577 37 KTVGTVGCGRIGKL-LLQRLKP-FNCNLL-YHDRVKMDPQL-EKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK 112 (221)
Q Consensus 37 ~~vgIIG~G~iG~~-iA~~l~~-~G~~V~-~~d~~~~~~~~-~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~ 112 (221)
.+|||||+|.||+. +++.+.. -++++. ++|+++...+. ++..|+..+++++++..++|+|++++|..... +
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~h~-----~ 80 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASHF-----D 80 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHHH-----H
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchhHH-----H
Confidence 58999999999997 8888765 467765 88987755443 44457766678887767899999999943221 2
Q ss_pred HHHhcCCCCC-EEEEc-CCCCccCHHHHHHHHHhCCce
Q 027577 113 DRIAKMKKGV-LIVNN-ARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 113 ~~~~~mk~ga-~lIn~-srg~~vd~~al~~al~~g~i~ 148 (221)
.....++.|. +++.- ..-.+-+.+.|.++.++..+.
T Consensus 81 ~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 118 (319)
T 1tlt_A 81 VVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLT 118 (319)
T ss_dssp HHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCe
Confidence 2223455666 44442 223344556688888777665
No 184
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.36 E-value=7.3e-07 Score=77.31 Aligned_cols=67 Identities=30% Similarity=0.422 Sum_probs=53.9
Q ss_pred CCEEEEEccCHHHHHHHHHHccC--CCeEE-EEcCCCCChh-HHHhcCceecCCHHhhcC--CCCEEEEeCCC
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPF--NCNLL-YHDRVKMDPQ-LEKETGAKFEEDLDTMLP--KCDIVVVNTPL 102 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~--G~~V~-~~d~~~~~~~-~~~~~g~~~~~~l~ell~--~aDvVv~~~p~ 102 (221)
-.+|||||+|.||+.+++.+... ++++. ++|+++...+ .++..++..+.+++++++ ++|+|++|+|.
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 85 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPS 85 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCG
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCc
Confidence 46899999999999999999876 77855 7888654332 345568887889999996 89999999993
No 185
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=98.35 E-value=1.9e-06 Score=72.24 Aligned_cols=95 Identities=14% Similarity=0.210 Sum_probs=64.6
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChh-HHHhcC----ceecCCHHhhc-CCCCEEEEeCCCChh
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQ-LEKETG----AKFEEDLDTML-PKCDIVVVNTPLTEK 105 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~-~~~~~g----~~~~~~l~ell-~~aDvVv~~~p~~~~ 105 (221)
.++.|+++.|+|.|.+|+++++.|...|.+|++++|+....+ .++..+ +.. .+++++. .++|+|+.++|....
T Consensus 115 ~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~-~~~~~~~~~~~DivVn~t~~~~~ 193 (271)
T 1nyt_A 115 FIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQA-LSMDELEGHEFDLIINATSSGIS 193 (271)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEE-CCSGGGTTCCCSEEEECCSCGGG
T ss_pred cCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeE-ecHHHhccCCCCEEEECCCCCCC
Confidence 467899999999999999999999999999999999753322 222222 222 2344444 589999999985432
Q ss_pred hhhc--chHHHHhcCCCCCEEEEcCCCC
Q 027577 106 TRGM--FDKDRIAKMKKGVLIVNNARGA 131 (221)
Q Consensus 106 t~~~--i~~~~~~~mk~ga~lIn~srg~ 131 (221)
. .+ +.. ..++++.+++|+.-..
T Consensus 194 ~-~~~~i~~---~~l~~~~~v~D~~y~p 217 (271)
T 1nyt_A 194 G-DIPAIPS---SLIHPGIYCYDMFYQK 217 (271)
T ss_dssp T-CCCCCCG---GGCCTTCEEEESCCCS
T ss_pred C-CCCCCCH---HHcCCCCEEEEeccCC
Confidence 1 11 221 2356777888876654
No 186
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=98.35 E-value=1e-06 Score=77.75 Aligned_cols=92 Identities=14% Similarity=0.122 Sum_probs=66.8
Q ss_pred EEEEEccCHHHHHHHHHHccCC--------CeEEEEcCCCCC--h---hHHHh--------------cCceecCCHHhhc
Q 027577 38 TVGTVGCGRIGKLLLQRLKPFN--------CNLLYHDRVKMD--P---QLEKE--------------TGAKFEEDLDTML 90 (221)
Q Consensus 38 ~vgIIG~G~iG~~iA~~l~~~G--------~~V~~~d~~~~~--~---~~~~~--------------~g~~~~~~l~ell 90 (221)
||+|||.|.+|.++|..|...| .+|..|.|.+.. . +.... .++....++++++
T Consensus 36 KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~al 115 (391)
T 4fgw_A 36 KVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDSV 115 (391)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHHH
T ss_pred eEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHHH
Confidence 8999999999999999997654 358899875421 1 11110 1234557899999
Q ss_pred CCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCC
Q 027577 91 PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGA 131 (221)
Q Consensus 91 ~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~ 131 (221)
+++|+|++++| +...+.++ ++....++++..+|+++.|=
T Consensus 116 ~~ad~ii~avP-s~~~r~~l-~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 116 KDVDIIVFNIP-HQFLPRIC-SQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp TTCSEEEECSC-GGGHHHHH-HHHTTTSCTTCEEEECCCSC
T ss_pred hcCCEEEEECC-hhhhHHHH-HHhccccCCCceeEEecccc
Confidence 99999999999 33333333 34556788999999999983
No 187
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=98.33 E-value=2.1e-06 Score=72.34 Aligned_cols=96 Identities=18% Similarity=0.154 Sum_probs=62.7
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChh-HHHhcC---ceecCCHHhhc-CCCCEEEEeCCCCh
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQ-LEKETG---AKFEEDLDTML-PKCDIVVVNTPLTE 104 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~-~~~~~g---~~~~~~l~ell-~~aDvVv~~~p~~~ 104 (221)
+.++.|+++.|+|.|.+|++++..|...|. +|.+++|+....+ .++..+ +... +++++- .++|+||.++|..-
T Consensus 115 ~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~-~~~~l~~~~~DivInaTp~gm 193 (272)
T 3pwz_A 115 GEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRIS-RYEALEGQSFDIVVNATSASL 193 (272)
T ss_dssp CCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEE-CSGGGTTCCCSEEEECSSGGG
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEe-eHHHhcccCCCEEEECCCCCC
Confidence 346889999999999999999999999996 8999999754332 223322 2222 344443 78999999999432
Q ss_pred hhh-hcchHHHHhcCCCCCEEEEcCCC
Q 027577 105 KTR-GMFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 105 ~t~-~~i~~~~~~~mk~ga~lIn~srg 130 (221)
... ..+.. +.++++.+++|+.-.
T Consensus 194 ~~~~~~i~~---~~l~~~~~V~DlvY~ 217 (272)
T 3pwz_A 194 TADLPPLPA---DVLGEAALAYELAYG 217 (272)
T ss_dssp GTCCCCCCG---GGGTTCSEEEESSCS
T ss_pred CCCCCCCCH---HHhCcCCEEEEeecC
Confidence 111 11222 234566666665443
No 188
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.33 E-value=3.1e-06 Score=64.25 Aligned_cols=104 Identities=15% Similarity=0.179 Sum_probs=74.0
Q ss_pred CCCEEEEEcc----CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcc
Q 027577 35 EGKTVGTVGC----GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF 110 (221)
Q Consensus 35 ~g~~vgIIG~----G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i 110 (221)
+-++|+|||. |++|+.+++.|+..|++|+..++.....+ -.|...+.+++++-+..|++++++|. +....++
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~~---i~G~~~~~sl~el~~~vDlavi~vp~-~~~~~v~ 87 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEE---LFGEEAVASLLDLKEPVDILDVFRPP-SALMDHL 87 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSE---ETTEECBSSGGGCCSCCSEEEECSCH-HHHTTTH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccCc---CCCEEecCCHHHCCCCCCEEEEEeCH-HHHHHHH
Confidence 3578999999 89999999999999999777766411111 14777777899998899999999994 4455555
Q ss_pred hHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 111 DKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 111 ~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
+ +..+ .....++++.+-. ++++.+..++..+.
T Consensus 88 ~-~~~~-~gi~~i~~~~g~~----~~~~~~~a~~~Gir 119 (140)
T 1iuk_A 88 P-EVLA-LRPGLVWLQSGIR----HPEFEKALKEAGIP 119 (140)
T ss_dssp H-HHHH-HCCSCEEECTTCC----CHHHHHHHHHTTCC
T ss_pred H-HHHH-cCCCEEEEcCCcC----HHHHHHHHHHcCCE
Confidence 3 3333 3334666654332 57788888877766
No 189
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.33 E-value=4.1e-06 Score=63.81 Aligned_cols=101 Identities=12% Similarity=0.100 Sum_probs=72.9
Q ss_pred CCEEEEEcc----CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcch
Q 027577 36 GKTVGTVGC----GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 111 (221)
Q Consensus 36 g~~vgIIG~----G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~ 111 (221)
-++|+|||. |++|..+++.|+..|++|+..++.. .+ -.|+..+.+++++....|++++++|. +....++.
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~--~~---i~G~~~y~sl~~l~~~vDlvvi~vp~-~~~~~vv~ 95 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKY--EE---VLGRKCYPSVLDIPDKIEVVDLFVKP-KLTMEYVE 95 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC--SE---ETTEECBSSGGGCSSCCSEEEECSCH-HHHHHHHH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCC--Ce---ECCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHHH
Confidence 689999999 7999999999999999977776643 11 24777778899998899999999994 44444443
Q ss_pred HHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 112 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 112 ~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
+..+ .....+++.. |. .++++.+.+++..+.
T Consensus 96 -~~~~-~gi~~i~~~~--g~--~~~~l~~~a~~~Gi~ 126 (144)
T 2d59_A 96 -QAIK-KGAKVVWFQY--NT--YNREASKKADEAGLI 126 (144)
T ss_dssp -HHHH-HTCSEEEECT--TC--CCHHHHHHHHHTTCE
T ss_pred -HHHH-cCCCEEEECC--Cc--hHHHHHHHHHHcCCE
Confidence 3333 2334555543 32 367788888887776
No 190
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.31 E-value=2.3e-06 Score=73.16 Aligned_cols=65 Identities=15% Similarity=0.319 Sum_probs=50.0
Q ss_pred CEEEEEccCHHHHHHHHHHccC-CCeE-EEEcCCCCChh-HHHhcCc-eecCCHHhhc-CCCCEEEEeCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF-NCNL-LYHDRVKMDPQ-LEKETGA-KFEEDLDTML-PKCDIVVVNTP 101 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~-G~~V-~~~d~~~~~~~-~~~~~g~-~~~~~l~ell-~~aDvVv~~~p 101 (221)
.+|||||+|.||+.+++.+... ++++ .++|+++...+ .++..++ ..+.++++++ +++|+|++++|
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp 71 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASP 71 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSC
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCC
Confidence 3799999999999999999776 5675 47787653322 3334454 5567999999 78999999999
No 191
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.31 E-value=1.6e-06 Score=75.27 Aligned_cols=68 Identities=22% Similarity=0.264 Sum_probs=53.1
Q ss_pred CCCEEEEEccCHHHH-HHHHHHccC-CCeEE-EEcCCCCCh-hHHHhcCceecCCHHhhcC--CCCEEEEeCCC
Q 027577 35 EGKTVGTVGCGRIGK-LLLQRLKPF-NCNLL-YHDRVKMDP-QLEKETGAKFEEDLDTMLP--KCDIVVVNTPL 102 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~-~iA~~l~~~-G~~V~-~~d~~~~~~-~~~~~~g~~~~~~l~ell~--~aDvVv~~~p~ 102 (221)
.-.+|||||+|.||+ .+++.++.. +++|. ++|+++... +.++..|+..+.+++++++ +.|+|++|+|.
T Consensus 26 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~ 99 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPA 99 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCG
T ss_pred CceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCc
Confidence 346899999999998 788888776 77765 678865333 3345568877789999996 58999999993
No 192
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.29 E-value=2e-06 Score=73.59 Aligned_cols=107 Identities=13% Similarity=0.213 Sum_probs=67.5
Q ss_pred CEEEEEccCHHHHHH-HHHHccCCCeEE-EEcCCCCChh-HHHhcCce-ecCCHHhhcC--CCCEEEEeCCCChhhhhcc
Q 027577 37 KTVGTVGCGRIGKLL-LQRLKPFNCNLL-YHDRVKMDPQ-LEKETGAK-FEEDLDTMLP--KCDIVVVNTPLTEKTRGMF 110 (221)
Q Consensus 37 ~~vgIIG~G~iG~~i-A~~l~~~G~~V~-~~d~~~~~~~-~~~~~g~~-~~~~l~ell~--~aDvVv~~~p~~~~t~~~i 110 (221)
.+|||||+|.||+.+ ++.+...+++++ ++|+++...+ .++..++. .+.+++++++ ++|+|++++|.. ...
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~--~h~-- 76 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNE--LHR-- 76 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGG--GHH--
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChh--HhH--
Confidence 379999999999998 777766778865 6788653332 34455664 5678999987 599999999932 221
Q ss_pred hHHHHhcCCCCCEEEEc--CCCCccCHHHHHHHHHhCCce
Q 027577 111 DKDRIAKMKKGVLIVNN--ARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 111 ~~~~~~~mk~ga~lIn~--srg~~vd~~al~~al~~g~i~ 148 (221)
+.....++.|..++.- .....-+.+.|.++.++..+.
T Consensus 77 -~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~ 115 (332)
T 2glx_A 77 -EQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVV 115 (332)
T ss_dssp -HHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCC
T ss_pred -HHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCE
Confidence 2223345567644432 122333345566666655444
No 193
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=98.29 E-value=5e-06 Score=73.07 Aligned_cols=97 Identities=23% Similarity=0.310 Sum_probs=76.3
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCC----CCCh---------hHHHhcC-ceecCCHHhhcCCCCE
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRV----KMDP---------QLEKETG-AKFEEDLDTMLPKCDI 95 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~----~~~~---------~~~~~~g-~~~~~~l~ell~~aDv 95 (221)
+..+.+.+|.|+|.|.+|..+|+.+...|. +|+++|++ .... ..+...+ .....+++++++.+|+
T Consensus 187 g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADV 266 (388)
T 1vl6_A 187 EKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADF 266 (388)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSE
T ss_pred CCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCE
Confidence 347899999999999999999999999999 79999997 3221 1222211 1124579999999999
Q ss_pred EEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCc
Q 027577 96 VVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAI 132 (221)
Q Consensus 96 Vv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~ 132 (221)
++-+.. .+++.++.++.|+++++|+.+|+-..
T Consensus 267 lIG~Sa-----p~l~t~emVk~Ma~~pIIfalSNPt~ 298 (388)
T 1vl6_A 267 FIGVSR-----GNILKPEWIKKMSRKPVIFALANPVP 298 (388)
T ss_dssp EEECSC-----SSCSCHHHHTTSCSSCEEEECCSSSC
T ss_pred EEEeCC-----CCccCHHHHHhcCCCCEEEEcCCCCC
Confidence 887642 37899999999999999999997553
No 194
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=98.28 E-value=3.6e-06 Score=70.03 Aligned_cols=101 Identities=17% Similarity=0.137 Sum_probs=74.6
Q ss_pred CCCCEEEEEccCHHHHHHHHHHccCCCeE-EEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchH
Q 027577 34 LEGKTVGTVGCGRIGKLLLQRLKPFNCNL-LYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK 112 (221)
Q Consensus 34 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V-~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~ 112 (221)
-..++|+++|+|+||+.+++. . ++++ .+|+ .+.. ++|+....++++++.++|+|+-|.+ . ..+.+
T Consensus 10 ~~~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~--~k~g----elgv~a~~d~d~lla~pD~VVe~A~--~---~av~e 75 (253)
T 1j5p_A 10 HHHMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD--RISK----DIPGVVRLDEFQVPSDVSTVVECAS--P---EAVKE 75 (253)
T ss_dssp -CCCEEEEECCSHHHHHHHHH--S-CCSEEEEEC--SSCC----CCSSSEECSSCCCCTTCCEEEECSC--H---HHHHH
T ss_pred cccceEEEECcCHHHHHHHhc--C-CcEEEEEEe--cccc----ccCceeeCCHHHHhhCCCEEEECCC--H---HHHHH
Confidence 457899999999999999998 4 7875 5666 2222 2266667789999999999998886 2 23444
Q ss_pred HHHhcCCCCCEEEEcCCCCccCH---HHHHHHHHhCCce
Q 027577 113 DRIAKMKKGVLIVNNARGAIMDT---QAVVDACSSGHIA 148 (221)
Q Consensus 113 ~~~~~mk~ga~lIn~srg~~vd~---~al~~al~~g~i~ 148 (221)
.....|+.|.-+|-+|-|.+.|. +.|.++.++|+-.
T Consensus 76 ~~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~ 114 (253)
T 1j5p_A 76 YSLQILKNPVNYIIISTSAFADEVFRERFFSELKNSPAR 114 (253)
T ss_dssp HHHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCE
T ss_pred HHHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCe
Confidence 45677899999999999888886 4566666666544
No 195
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.27 E-value=2e-06 Score=74.00 Aligned_cols=107 Identities=14% Similarity=0.159 Sum_probs=69.6
Q ss_pred CEEEEEccCHHHHHHHHHHc-c-CCCeE-EEEcCCCCChh-HHHhcCc-eecCCHHhhcC--CCCEEEEeCCCChhhhhc
Q 027577 37 KTVGTVGCGRIGKLLLQRLK-P-FNCNL-LYHDRVKMDPQ-LEKETGA-KFEEDLDTMLP--KCDIVVVNTPLTEKTRGM 109 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~-~-~G~~V-~~~d~~~~~~~-~~~~~g~-~~~~~l~ell~--~aDvVv~~~p~~~~t~~~ 109 (221)
.+|||||+|.||+.+++.++ . .++++ .++|+++...+ .++..|+ ..+.+++++++ ++|+|++|+|....
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h---- 84 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFH---- 84 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGH----
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhH----
Confidence 58999999999999999987 5 47775 56788653332 3344576 55678999986 69999999993222
Q ss_pred chHHHHhcCCCCCEEEEcC--CCCccCHHHHHHHHHhC-Cce
Q 027577 110 FDKDRIAKMKKGVLIVNNA--RGAIMDTQAVVDACSSG-HIA 148 (221)
Q Consensus 110 i~~~~~~~mk~ga~lIn~s--rg~~vd~~al~~al~~g-~i~ 148 (221)
-+.....++.|..++.-. ...+-+.+.|.++.++. ++.
T Consensus 85 -~~~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~ 125 (346)
T 3cea_A 85 -PEMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQI 125 (346)
T ss_dssp -HHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSC
T ss_pred -HHHHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCe
Confidence 122334456676554311 11222334577777776 665
No 196
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=98.26 E-value=5.9e-06 Score=70.97 Aligned_cols=72 Identities=17% Similarity=0.120 Sum_probs=53.0
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhHHH----h----cCc--e--ecCC---HHhhcCCCC
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEK----E----TGA--K--FEED---LDTMLPKCD 94 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~----~----~g~--~--~~~~---l~ell~~aD 94 (221)
+.++.|+++.|+|.|.+|++++..|...|+ +|.+++|+....+.++ + .++ . ..++ +.+.+.++|
T Consensus 149 ~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aD 228 (315)
T 3tnl_A 149 GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESV 228 (315)
T ss_dssp TCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCS
T ss_pred CCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCC
Confidence 456899999999999999999999999999 8999999732222221 1 121 1 2223 445678999
Q ss_pred EEEEeCCC
Q 027577 95 IVVVNTPL 102 (221)
Q Consensus 95 vVv~~~p~ 102 (221)
+||.++|.
T Consensus 229 iIINaTp~ 236 (315)
T 3tnl_A 229 IFTNATGV 236 (315)
T ss_dssp EEEECSST
T ss_pred EEEECccC
Confidence 99999984
No 197
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.26 E-value=3.9e-06 Score=72.09 Aligned_cols=102 Identities=16% Similarity=0.148 Sum_probs=69.3
Q ss_pred CEEEEEccCHHHHHHHHHHccC-CCeE-EEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHH
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF-NCNL-LYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDR 114 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~-G~~V-~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~ 114 (221)
.+|||||+|+||+.+++.+... ++++ .++|++... +. . .++..++++++++.++|+|++++|.... -+..
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~-~~-~-~gv~~~~d~~~ll~~~DvViiatp~~~h-----~~~~ 75 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL-DT-K-TPVFDVADVDKHADDVDVLFLCMGSATD-----IPEQ 75 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC-SS-S-SCEEEGGGGGGTTTTCSEEEECSCTTTH-----HHHH
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH-hh-c-CCCceeCCHHHHhcCCCEEEEcCCcHHH-----HHHH
Confidence 4899999999999999999776 5774 578886433 22 1 4666667888888889999999984322 2233
Q ss_pred HhcCCCCCEEEEcCCCCc-c-CH-HHHHHHHHhCC
Q 027577 115 IAKMKKGVLIVNNARGAI-M-DT-QAVVDACSSGH 146 (221)
Q Consensus 115 ~~~mk~ga~lIn~srg~~-v-d~-~al~~al~~g~ 146 (221)
...++.|..+|...-..+ + +. +.|.++.+++.
T Consensus 76 ~~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~ 110 (320)
T 1f06_A 76 APKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAG 110 (320)
T ss_dssp HHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHCCCEEEECCCCcCCHHHHHHHHHHHHHhCC
Confidence 455677887776554432 2 22 45666666554
No 198
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.25 E-value=2.1e-06 Score=74.03 Aligned_cols=66 Identities=24% Similarity=0.390 Sum_probs=51.6
Q ss_pred CEEEEEccCHHHHHHHHHHccC-CCeEE-EEcCCCCChh-HHHhcCc-eecCCHHhhcC--CCCEEEEeCCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQ-LEKETGA-KFEEDLDTMLP--KCDIVVVNTPL 102 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~-G~~V~-~~d~~~~~~~-~~~~~g~-~~~~~l~ell~--~aDvVv~~~p~ 102 (221)
.+|||||+|.||+.+++.+... ++++. ++|+++...+ .++..++ ..+.+++++++ ++|+|++|+|.
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 74 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSST 74 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCC
Confidence 4899999999999999999775 67765 6788654332 3445566 36789999997 79999999993
No 199
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.25 E-value=6.9e-07 Score=76.21 Aligned_cols=106 Identities=17% Similarity=0.281 Sum_probs=66.6
Q ss_pred CEEEEEccCHHHHHHHHHHccC-CCeE-EEEcCCCCChhHHHhcCceecCCHHhhcC--CCCEEEEeCCCChhhhhcchH
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF-NCNL-LYHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGMFDK 112 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~-G~~V-~~~d~~~~~~~~~~~~g~~~~~~l~ell~--~aDvVv~~~p~~~~t~~~i~~ 112 (221)
.+|||||+|.||+.+++.+... ++++ .++|+++...+.+.+. +..+.+++++++ ++|+|++++|... .. +
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~~l~~~~~D~V~i~tp~~~--h~---~ 84 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPG-CVIESDWRSVVSAPEVEAVIIATPPAT--HA---E 84 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTT-CEEESSTHHHHTCTTCCEEEEESCGGG--HH---H
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhh-CcccCCHHHHhhCCCCCEEEEeCChHH--HH---H
Confidence 5899999999999999999875 6774 5788864322221111 455678999985 7999999999322 21 2
Q ss_pred HHHhcCCCCCE-EEEc-CCCCccCHHHHHHHHHhCCce
Q 027577 113 DRIAKMKKGVL-IVNN-ARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 113 ~~~~~mk~ga~-lIn~-srg~~vd~~al~~al~~g~i~ 148 (221)
-....++.|.. ++.- ..-.+-+.+.|.++.++.++.
T Consensus 85 ~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 122 (315)
T 3c1a_A 85 ITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVM 122 (315)
T ss_dssp HHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCE
Confidence 22234556654 4442 122333445677776665544
No 200
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=98.24 E-value=2.5e-06 Score=72.25 Aligned_cols=71 Identities=20% Similarity=0.200 Sum_probs=54.8
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhH-HHhc-------Cceec--CCHHhhcCCCCEEEEeC
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQL-EKET-------GAKFE--EDLDTMLPKCDIVVVNT 100 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~-~~~~-------g~~~~--~~l~ell~~aDvVv~~~ 100 (221)
.++.|+++.|+|.|.+|++++..|...|. +|.+++|+....+. ++.. .+... +++++.++++|+||.++
T Consensus 123 ~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaT 202 (283)
T 3jyo_A 123 PNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT 202 (283)
T ss_dssp TTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECS
T ss_pred cCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECC
Confidence 46889999999999999999999999999 69999997543322 2211 12222 37788888999999999
Q ss_pred CC
Q 027577 101 PL 102 (221)
Q Consensus 101 p~ 102 (221)
|.
T Consensus 203 p~ 204 (283)
T 3jyo_A 203 PM 204 (283)
T ss_dssp ST
T ss_pred CC
Confidence 94
No 201
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.24 E-value=3.8e-06 Score=71.82 Aligned_cols=107 Identities=14% Similarity=0.188 Sum_probs=67.6
Q ss_pred CEEEEEccCHHHH-HHHHHHccC-CCeEEEEcCCCCChh-HHHhcCcee-cCCHHhhc-CCCCEEEEeCCCChhhhhcch
Q 027577 37 KTVGTVGCGRIGK-LLLQRLKPF-NCNLLYHDRVKMDPQ-LEKETGAKF-EEDLDTML-PKCDIVVVNTPLTEKTRGMFD 111 (221)
Q Consensus 37 ~~vgIIG~G~iG~-~iA~~l~~~-G~~V~~~d~~~~~~~-~~~~~g~~~-~~~l~ell-~~aDvVv~~~p~~~~t~~~i~ 111 (221)
.+|||||+|.||+ .+++.+... ++++.++|+++...+ .++..++.. +.+..+++ +++|+|++++|.. ...
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~--~h~--- 77 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATD--VHS--- 77 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGG--GHH---
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCch--hHH---
Confidence 4899999999998 489988764 678778898654333 334556653 34555566 7899999999932 221
Q ss_pred HHHHhcCCCCC-EEEEc-CCCCccCHHHHHHHHHhCCce
Q 027577 112 KDRIAKMKKGV-LIVNN-ARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 112 ~~~~~~mk~ga-~lIn~-srg~~vd~~al~~al~~g~i~ 148 (221)
+.....++.|. +++.- ..-.+-+.+.|.++.++.++.
T Consensus 78 ~~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~ 116 (323)
T 1xea_A 78 TLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQP 116 (323)
T ss_dssp HHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCe
Confidence 12223345565 45542 122333455677777777665
No 202
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.23 E-value=2e-06 Score=73.98 Aligned_cols=108 Identities=10% Similarity=0.106 Sum_probs=68.3
Q ss_pred CCEEEEEccCHHHHHHHHHHccC-CCeEE-EEcCCCCChh-HHHhcCc-eecCCHHhhcC--CCCEEEEeCCCChhhhhc
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQ-LEKETGA-KFEEDLDTMLP--KCDIVVVNTPLTEKTRGM 109 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~-G~~V~-~~d~~~~~~~-~~~~~g~-~~~~~l~ell~--~aDvVv~~~p~~~~t~~~ 109 (221)
-.+|||||+|.||+.+++.++.. ++++. ++|+++...+ .++..++ ..+.+++++++ ++|+|++|+|......
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~-- 82 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQGHYS-- 82 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGGHHH--
T ss_pred eEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHHHHH--
Confidence 35899999999999999999875 67766 6788654333 3445676 46789999997 7999999999432221
Q ss_pred chHHHHhcCCCCC-EEEEcC-CCCccCHHHHHHHHHhCCce
Q 027577 110 FDKDRIAKMKKGV-LIVNNA-RGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 110 i~~~~~~~mk~ga-~lIn~s-rg~~vd~~al~~al~~g~i~ 148 (221)
+ ....++.|. +++.-- .-.+-+.++|.++.++.++.
T Consensus 83 ~---~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~ 120 (330)
T 3e9m_A 83 A---AKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVF 120 (330)
T ss_dssp H---HHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCC
T ss_pred H---HHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCe
Confidence 1 122333443 333321 22333445566666555544
No 203
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=98.22 E-value=3.9e-06 Score=72.49 Aligned_cols=65 Identities=23% Similarity=0.249 Sum_probs=50.4
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhH-----HHh---c----CceecCCHHhhcCCCCEEEEeC
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQL-----EKE---T----GAKFEEDLDTMLPKCDIVVVNT 100 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~-----~~~---~----g~~~~~~l~ell~~aDvVv~~~ 100 (221)
.++|+|||.|.+|..+|..|...|+ +|..||+++...+. ... . .+....++++.+++||+|+++.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~ 86 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTA 86 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEcc
Confidence 4699999999999999999988887 99999987643322 110 1 1333468888899999999998
No 204
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.21 E-value=4e-06 Score=71.51 Aligned_cols=65 Identities=15% Similarity=0.319 Sum_probs=48.6
Q ss_pred CEEEEEccCHHHHHHHHHHccCC--CeEEEEcCCCCChhHHH-hc---------Ccee-cCCHHhhcCCCCEEEEeCCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFN--CNLLYHDRVKMDPQLEK-ET---------GAKF-EEDLDTMLPKCDIVVVNTPL 102 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G--~~V~~~d~~~~~~~~~~-~~---------g~~~-~~~l~ell~~aDvVv~~~p~ 102 (221)
++|+|||.|.||..+|..|...| .+|.++|+++...+... .. .+.. ..++ +.+++||+|++++|.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~ 79 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGN 79 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCC
Confidence 58999999999999999998878 68999998653222111 11 1232 3566 778999999999985
No 205
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=98.19 E-value=3.1e-06 Score=71.67 Aligned_cols=95 Identities=20% Similarity=0.179 Sum_probs=62.2
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhHH-HhcCceecCCHHhhcCCCCEEEEeCCCC--hhh
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLE-KETGAKFEEDLDTMLPKCDIVVVNTPLT--EKT 106 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~-~~~g~~~~~~l~ell~~aDvVv~~~p~~--~~t 106 (221)
+.++.|+++.|+|.|.+|++++..|...|+ +|.+++|+....+.. .......++++++ + ++|+||.++|.. +..
T Consensus 117 ~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~Gm~~~~ 194 (282)
T 3fbt_A 117 RVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSN-L-KGDVIINCTPKGMYPKE 194 (282)
T ss_dssp TCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSSTTSTTST
T ss_pred CCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCcccHHHHHh-c-cCCEEEECCccCccCCC
Confidence 346889999999999999999999999998 899999975332222 1111122234444 4 899999999853 111
Q ss_pred h-hcchHHHHhcCCCCCEEEEcCCC
Q 027577 107 R-GMFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 107 ~-~~i~~~~~~~mk~ga~lIn~srg 130 (221)
. ..+..+. ++++.+++|+.-.
T Consensus 195 ~~~pi~~~~---l~~~~~v~DlvY~ 216 (282)
T 3fbt_A 195 GESPVDKEV---VAKFSSAVDLIYN 216 (282)
T ss_dssp TCCSSCHHH---HTTCSEEEESCCS
T ss_pred ccCCCCHHH---cCCCCEEEEEeeC
Confidence 1 1133333 3566666666543
No 206
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.18 E-value=5.1e-06 Score=72.18 Aligned_cols=68 Identities=24% Similarity=0.283 Sum_probs=53.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHc-c-CCCeEE-EEcCCCCChh-HHHhcC--ceecCCHHhhcC--CCCEEEEeCCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLK-P-FNCNLL-YHDRVKMDPQ-LEKETG--AKFEEDLDTMLP--KCDIVVVNTPL 102 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~-~-~G~~V~-~~d~~~~~~~-~~~~~g--~~~~~~l~ell~--~aDvVv~~~p~ 102 (221)
.-.+|||||+|.||+..++.+. . -++++. ++|+++...+ .++..+ +..+.+++++++ +.|+|++|+|.
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~ 97 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASN 97 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCG
T ss_pred CeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCc
Confidence 3468999999999999999987 4 477765 6888765433 344556 567789999986 59999999994
No 207
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.18 E-value=4.8e-06 Score=71.41 Aligned_cols=108 Identities=13% Similarity=0.150 Sum_probs=67.1
Q ss_pred CCEEEEEccCHHHHHHHHHHccC-CCeEE-EEcCCCCChh-HHHhcCce-ecCCHHhhcC--CCCEEEEeCCCChhhhhc
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQ-LEKETGAK-FEEDLDTMLP--KCDIVVVNTPLTEKTRGM 109 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~-G~~V~-~~d~~~~~~~-~~~~~g~~-~~~~l~ell~--~aDvVv~~~p~~~~t~~~ 109 (221)
-.+|||||+|.||+.+++.++.. ++++. ++|+++...+ .++..++. .+.+++++++ ++|+|++++|.... .-
T Consensus 5 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h--~~ 82 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDH--YK 82 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGGH--HH
T ss_pred ceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHH--HH
Confidence 35899999999999999988765 55654 6788764433 44455764 6689999998 79999999993322 11
Q ss_pred chHHHHhcCCCCCEEEE-cC-CCCccCHHHHHHHHHhCCce
Q 027577 110 FDKDRIAKMKKGVLIVN-NA-RGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 110 i~~~~~~~mk~ga~lIn-~s-rg~~vd~~al~~al~~g~i~ 148 (221)
+ ....++.|..++. -- .-.+-+.++|.++.++.++.
T Consensus 83 ~---~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~ 120 (329)
T 3evn_A 83 V---AKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLF 120 (329)
T ss_dssp H---HHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCC
T ss_pred H---HHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCE
Confidence 1 2233445544442 21 22333445566666665554
No 208
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=98.17 E-value=1.1e-05 Score=69.27 Aligned_cols=107 Identities=8% Similarity=0.076 Sum_probs=68.7
Q ss_pred CEEEEEccCHHHH-HHHHHHccCCCeE-EEEcCCCCChh-HHHhc-CceecCCHHhhcC--CCCEEEEeCCCChhhhhcc
Q 027577 37 KTVGTVGCGRIGK-LLLQRLKPFNCNL-LYHDRVKMDPQ-LEKET-GAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGMF 110 (221)
Q Consensus 37 ~~vgIIG~G~iG~-~iA~~l~~~G~~V-~~~d~~~~~~~-~~~~~-g~~~~~~l~ell~--~aDvVv~~~p~~~~t~~~i 110 (221)
.+|||||+|.+|. .++..++..++++ .++|+++...+ .++.. ++..+.+++++++ +.|+|++|+|....
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h----- 79 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPCDR----- 79 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGGGH-----
T ss_pred cEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChhhH-----
Confidence 5899999999996 6777776678885 57888765444 34445 5666789999996 69999999993322
Q ss_pred hHHHHhcCCCCCE-EEEc-CCCCccCHHHHHHHHHhCCce
Q 027577 111 DKDRIAKMKKGVL-IVNN-ARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 111 ~~~~~~~mk~ga~-lIn~-srg~~vd~~al~~al~~g~i~ 148 (221)
-+.....++.|.. ++.- ..-.+-+.++|.++.++.++.
T Consensus 80 ~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~ 119 (336)
T 2p2s_A 80 AELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETGRK 119 (336)
T ss_dssp HHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCE
Confidence 1223334555653 4432 122223445566666655444
No 209
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.16 E-value=8.6e-06 Score=70.25 Aligned_cols=65 Identities=20% Similarity=0.297 Sum_probs=49.5
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhHH-----Hh-------cCceecCCHHhhcCCCCEEEEeCC
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLE-----KE-------TGAKFEEDLDTMLPKCDIVVVNTP 101 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~-----~~-------~g~~~~~~l~ell~~aDvVv~~~p 101 (221)
.++|+|||.|.||..+|..+...|+ +|..||+++...+.. +. ..+....++ +.+++||+|+++++
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg 91 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAG 91 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCC
Confidence 3699999999999999999998898 999999976433210 10 123343577 77899999999983
No 210
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.15 E-value=3.6e-06 Score=71.80 Aligned_cols=102 Identities=18% Similarity=0.269 Sum_probs=61.8
Q ss_pred CCEEEEEccCHHHHHHHHHHcc-CCCeEE-EEcCCCCChhHHHhcCce--ecCCHHhhcCCCCEEEEeCCCChhhhhcch
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKP-FNCNLL-YHDRVKMDPQLEKETGAK--FEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 111 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~-~G~~V~-~~d~~~~~~~~~~~~g~~--~~~~l~ell~~aDvVv~~~p~~~~t~~~i~ 111 (221)
-.+|||||+|+||+.+++.++. -++++. ++|+++...+ ..|+. .++++.+. .++|+|++|+|. ....
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~---~~g~~~~~~~~l~~~-~~~DvViiatp~--~~h~--- 79 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVP---FELQPFRVVSDIEQL-ESVDVALVCSPS--REVE--- 79 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------CCTTSCEESSGGGS-SSCCEEEECSCH--HHHH---
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHH---HcCCCcCCHHHHHhC-CCCCEEEECCCc--hhhH---
Confidence 3589999999999999999976 467876 6888654332 24543 24455555 789999999992 2221
Q ss_pred HHHHhcCCCCCEEEEcCC--C-CccCHHHHHHHHHhCC
Q 027577 112 KDRIAKMKKGVLIVNNAR--G-AIMDTQAVVDACSSGH 146 (221)
Q Consensus 112 ~~~~~~mk~ga~lIn~sr--g-~~vd~~al~~al~~g~ 146 (221)
+.....++.|..+++..- + ...+.+.|.++.++..
T Consensus 80 ~~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g 117 (304)
T 3bio_A 80 RTALEILKKGICTADSFDIHDGILALRRSLGDAAGKSG 117 (304)
T ss_dssp HHHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCC
Confidence 223345566777776532 1 1223345666655544
No 211
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=98.13 E-value=3.9e-06 Score=70.85 Aligned_cols=108 Identities=19% Similarity=0.311 Sum_probs=70.0
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChh-HHHhcC----------ceecCCHHhhcCCCCEEEEeC
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQ-LEKETG----------AKFEEDLDTMLPKCDIVVVNT 100 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~-~~~~~g----------~~~~~~l~ell~~aDvVv~~~ 100 (221)
.++.|+++.|+|.|.||+++|+.|...| +|++++|+....+ ..+..+ +.. .++.+.+.++|+|+.++
T Consensus 124 ~~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~~~~~~DilVn~a 201 (287)
T 1nvt_A 124 GRVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKF-SGLDVDLDGVDIIINAT 201 (287)
T ss_dssp CCCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEE-ECTTCCCTTCCEEEECS
T ss_pred CCcCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEE-eeHHHhhCCCCEEEECC
Confidence 4688999999999999999999999999 9999998643222 111111 111 23356678899999999
Q ss_pred CCChhhh---hcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhC
Q 027577 101 PLTEKTR---GMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 145 (221)
Q Consensus 101 p~~~~t~---~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g 145 (221)
|...... ..+. ..+.++++++++|+.-.. ..+ .|.+..++.
T Consensus 202 g~~~~~~~~~~~~~--~~~~l~~~~~v~Dv~y~p-~~t-~ll~~a~~~ 245 (287)
T 1nvt_A 202 PIGMYPNIDVEPIV--KAEKLREDMVVMDLIYNP-LET-VLLKEAKKV 245 (287)
T ss_dssp CTTCTTCCSSCCSS--CSTTCCSSSEEEECCCSS-SSC-HHHHHHHTT
T ss_pred CCCCCCCCCCCCCC--CHHHcCCCCEEEEeeeCC-ccC-HHHHHHHHC
Confidence 8543210 0120 134577888899887643 222 344444433
No 212
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.13 E-value=7e-06 Score=70.87 Aligned_cols=105 Identities=15% Similarity=0.151 Sum_probs=64.1
Q ss_pred CEEEEEccCHHHHH-HHH-HHcc-CCCeEE-EEcCCCCChhHHHhc-CceecCCHHhhcCC--CCEEEEeCCCChhhhhc
Q 027577 37 KTVGTVGCGRIGKL-LLQ-RLKP-FNCNLL-YHDRVKMDPQLEKET-GAKFEEDLDTMLPK--CDIVVVNTPLTEKTRGM 109 (221)
Q Consensus 37 ~~vgIIG~G~iG~~-iA~-~l~~-~G~~V~-~~d~~~~~~~~~~~~-g~~~~~~l~ell~~--aDvVv~~~p~~~~t~~~ 109 (221)
.+|||||+|.||+. .+. .+.. -++++. ++|+++...+.+... ++..+.++++++++ .|+|++|+|.....
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~--- 79 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHF--- 79 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGGGHH---
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChHHHH---
Confidence 48999999999996 565 4343 477765 788876544333333 66777899999976 89999999943221
Q ss_pred chHHHHhcCCCCCEEEEcC--CCCccCHHHHHHHHHhCC
Q 027577 110 FDKDRIAKMKKGVLIVNNA--RGAIMDTQAVVDACSSGH 146 (221)
Q Consensus 110 i~~~~~~~mk~ga~lIn~s--rg~~vd~~al~~al~~g~ 146 (221)
+.....++.|..++.-- .-.+-+.++|.++.++..
T Consensus 80 --~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g 116 (345)
T 3f4l_A 80 --EYAKRALEAGKNVLVEKPFTPTLAQAKELFALAKSKG 116 (345)
T ss_dssp --HHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHT
T ss_pred --HHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence 22233455566665432 112223334555444433
No 213
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.13 E-value=8.5e-06 Score=69.64 Aligned_cols=65 Identities=23% Similarity=0.304 Sum_probs=48.5
Q ss_pred CEEEEEccCHHHHHHHHHHcc--CCCeEEEEcCCCCChhHHH---hc-------C--ceecCCHHhhcCCCCEEEEeCCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKP--FNCNLLYHDRVKMDPQLEK---ET-------G--AKFEEDLDTMLPKCDIVVVNTPL 102 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~--~G~~V~~~d~~~~~~~~~~---~~-------g--~~~~~~l~ell~~aDvVv~~~p~ 102 (221)
++|+|||.|.||..+|..|.. .|.+|.++|+++...+... .. . +....++++ +++||+|++++|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~ 79 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence 589999999999999999876 5789999999764333211 00 1 233356766 8999999999973
No 214
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.12 E-value=3.6e-06 Score=72.61 Aligned_cols=66 Identities=23% Similarity=0.322 Sum_probs=51.4
Q ss_pred CEEEEEccCHHHHHHHHHHc-c-CCCeEE-EEcCCCCChh-HHHhcC--ceecCCHHhhcCC--CCEEEEeCCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLK-P-FNCNLL-YHDRVKMDPQ-LEKETG--AKFEEDLDTMLPK--CDIVVVNTPL 102 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~-~-~G~~V~-~~d~~~~~~~-~~~~~g--~~~~~~l~ell~~--aDvVv~~~p~ 102 (221)
.+|||||+|.||+.+++.+. . -++++. ++|+++...+ .++..+ ...++++++++++ +|+|++|+|.
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~ 76 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWG 76 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCG
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCc
Confidence 48999999999999999987 5 467765 6788653333 344556 5677899999975 9999999993
No 215
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=98.11 E-value=6.8e-06 Score=70.50 Aligned_cols=73 Identities=19% Similarity=0.186 Sum_probs=53.0
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhHH----Hh----cCc--e--ecCCH---HhhcCCCC
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLE----KE----TGA--K--FEEDL---DTMLPKCD 94 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~----~~----~g~--~--~~~~l---~ell~~aD 94 (221)
+.++.|+++.|+|.|.+|++++..|...|. +|.+++|+....+.+ ++ .+. . ...++ .+.+.++|
T Consensus 143 ~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~D 222 (312)
T 3t4e_A 143 GFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASAD 222 (312)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCS
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCce
Confidence 346889999999999999999999999998 799999973222111 11 121 1 12343 45678899
Q ss_pred EEEEeCCCC
Q 027577 95 IVVVNTPLT 103 (221)
Q Consensus 95 vVv~~~p~~ 103 (221)
+||.++|..
T Consensus 223 iIINaTp~G 231 (312)
T 3t4e_A 223 ILTNGTKVG 231 (312)
T ss_dssp EEEECSSTT
T ss_pred EEEECCcCC
Confidence 999999953
No 216
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=98.10 E-value=6e-06 Score=74.05 Aligned_cols=104 Identities=13% Similarity=0.092 Sum_probs=71.9
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHH--------------------hcCceecCCHHhhcCCCCE
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK--------------------ETGAKFEEDLDTMLPKCDI 95 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~--------------------~~g~~~~~~l~ell~~aDv 95 (221)
-.+|+|||+|-+|..+|..+...|++|+++|.++...+... .-.....++.++.++.||+
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad~ 100 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATDA 100 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSSE
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCCc
Confidence 45899999999999999999999999999998653222111 1123455688899999999
Q ss_pred EEEeCCCChhh-------hhcc--hHHHHhcCC---CCCEEEEcCCCCccCHHHHHH
Q 027577 96 VVVNTPLTEKT-------RGMF--DKDRIAKMK---KGVLIVNNARGAIMDTQAVVD 140 (221)
Q Consensus 96 Vv~~~p~~~~t-------~~~i--~~~~~~~mk---~ga~lIn~srg~~vd~~al~~ 140 (221)
+++|+| ||.. ..+. .+..-+.|+ ++.+||.-|.-.+=..+.+..
T Consensus 101 ~~I~Vp-TP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~ 156 (444)
T 3vtf_A 101 TFIAVG-TPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVA 156 (444)
T ss_dssp EEECCC-CCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHH
T ss_pred eEEEec-CCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHH
Confidence 999998 4321 1111 122333343 688999999877755555443
No 217
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.10 E-value=8.6e-06 Score=69.87 Aligned_cols=64 Identities=22% Similarity=0.233 Sum_probs=47.3
Q ss_pred CEEEEEccCHHHHHHHHHHccCCC--eEEEEcCCCCChhHHH-hc--------C--ceecCCHHhhcCCCCEEEEeCCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQLEK-ET--------G--AKFEEDLDTMLPKCDIVVVNTPL 102 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~-~~--------g--~~~~~~l~ell~~aDvVv~~~p~ 102 (221)
++|+|||.|.||..+|..|...|+ +|.++|+++...+... .. . +.. .+ .+.+++||+|++++|.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~-~d-~~~~~~aDvViiav~~ 77 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA-GD-YADLKGSDVVIVAAGV 77 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE-CC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe-CC-HHHhCCCCEEEEccCC
Confidence 589999999999999999988888 9999998653222211 10 1 222 34 4567899999999985
No 218
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.10 E-value=5.6e-06 Score=66.75 Aligned_cols=91 Identities=18% Similarity=0.114 Sum_probs=59.2
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHH-HhcCceec----CC---HHhh-cCCCCEEEEeCCCChhhh
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLE-KETGAKFE----ED---LDTM-LPKCDIVVVNTPLTEKTR 107 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~-~~~g~~~~----~~---l~el-l~~aDvVv~~~p~~~~t~ 107 (221)
++|.|+|+|.+|+.+|+.|...|++|.++|+++...+.. ...++..+ .+ ++++ ++++|+|+++++....+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n- 79 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVN- 79 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHH-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHH-
Confidence 579999999999999999999999999999875433332 23344321 12 3343 67899999999854433
Q ss_pred hcchHHHHhcCCCCCEEEEcCC
Q 027577 108 GMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn~sr 129 (221)
.+-......+.+...+|-..+
T Consensus 80 -~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 80 -LFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp -HHHHHHHHHTSCCCEEEECCC
T ss_pred -HHHHHHHHHHcCCCeEEEEEe
Confidence 222333333444455554433
No 219
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=98.09 E-value=7.5e-06 Score=62.32 Aligned_cols=91 Identities=12% Similarity=0.064 Sum_probs=57.9
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCC-CChhHHH---hcCceec-------CCHHhh-cCCCCEEEEeCCCC
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVK-MDPQLEK---ETGAKFE-------EDLDTM-LPKCDIVVVNTPLT 103 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~-~~~~~~~---~~g~~~~-------~~l~el-l~~aDvVv~~~p~~ 103 (221)
.++|.|+|+|.+|+.+++.|...|++|.++|+++ ...+... ..++..+ ..++++ ++++|+|+++++..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence 5679999999999999999999999999999863 1111111 1233321 123444 78999999999854
Q ss_pred hhhhhcchHHHHhcCCCCCEEEEcC
Q 027577 104 EKTRGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~lIn~s 128 (221)
+.+ +.-....+.+.+...+|...
T Consensus 83 ~~n--~~~~~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 83 ADN--AFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp HHH--HHHHHHHHHHTSSSCEEEEC
T ss_pred HHH--HHHHHHHHHHCCCCEEEEEE
Confidence 333 22233444554444454433
No 220
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.07 E-value=9.2e-06 Score=70.50 Aligned_cols=107 Identities=18% Similarity=0.308 Sum_probs=70.8
Q ss_pred CEEEEEccCHHHHHHHHHHccC-CCeE-EEEcCCCCCh-hHHHhcC----ceecCCHHhhcC--CCCEEEEeCCCChhhh
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF-NCNL-LYHDRVKMDP-QLEKETG----AKFEEDLDTMLP--KCDIVVVNTPLTEKTR 107 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~-G~~V-~~~d~~~~~~-~~~~~~g----~~~~~~l~ell~--~aDvVv~~~p~~~~t~ 107 (221)
.+|||||+|.||+.+++.+... ++++ .++|+++... ..++..+ ...+.+++++++ ++|+|++++|.. ..
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~--~h 84 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTS--LH 84 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGG--GH
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChH--HH
Confidence 5899999999999999988765 5665 5678765332 2334455 355678999986 599999999932 22
Q ss_pred hcchHHHHhcCCCCCEEEEcC--CCCccCHHHHHHHHHhCCce
Q 027577 108 GMFDKDRIAKMKKGVLIVNNA--RGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn~s--rg~~vd~~al~~al~~g~i~ 148 (221)
-+-....++.|..++.-- .-.+-+.++|.++.++.++.
T Consensus 85 ---~~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~ 124 (362)
T 1ydw_A 85 ---VEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQ 124 (362)
T ss_dssp ---HHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCC
T ss_pred ---HHHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCE
Confidence 122334566777655421 12233456678888777665
No 221
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.06 E-value=2e-05 Score=68.63 Aligned_cols=105 Identities=12% Similarity=0.221 Sum_probs=66.2
Q ss_pred CEEEEEccCHHHHH-HHHHHccC-CCeEE-EEcCCCCChhHHHhc-CceecCCHHhhcC--CCCEEEEeCCCChhhhhcc
Q 027577 37 KTVGTVGCGRIGKL-LLQRLKPF-NCNLL-YHDRVKMDPQLEKET-GAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGMF 110 (221)
Q Consensus 37 ~~vgIIG~G~iG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~-g~~~~~~l~ell~--~aDvVv~~~p~~~~t~~~i 110 (221)
.+|||||+|.||+. .+..++.. +++|. ++|+++.. ..... ++..+.+++++++ +.|+|++|+|.....
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~--~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~---- 81 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEK--VKRDLPDVTVIASPEAAVQHPDVDLVVIASPNATHA---- 81 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHH--HHHHCTTSEEESCHHHHHTCTTCSEEEECSCGGGHH----
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH--HHhhCCCCcEECCHHHHhcCCCCCEEEEeCChHHHH----
Confidence 58999999999997 77777665 67765 67875422 22233 5667789999997 799999999943221
Q ss_pred hHHHHhcCCCCCEEEEcC--CCCccCHHHHHHHHHhCCce
Q 027577 111 DKDRIAKMKKGVLIVNNA--RGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 111 ~~~~~~~mk~ga~lIn~s--rg~~vd~~al~~al~~g~i~ 148 (221)
+.....++.|..++.-- .-.+-+.++|.++.++..+.
T Consensus 82 -~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~ 120 (364)
T 3e82_A 82 -PLARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQRL 120 (364)
T ss_dssp -HHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCC
T ss_pred -HHHHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCCe
Confidence 12233445565555432 22333445566666655544
No 222
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=98.05 E-value=1.9e-05 Score=66.33 Aligned_cols=67 Identities=21% Similarity=0.207 Sum_probs=50.0
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCCh-hHHHhcCceecCCHHhhcCCCCEEEEeCCCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDP-QLEKETGAKFEEDLDTMLPKCDIVVVNTPLT 103 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~ 103 (221)
.++++.|+|.|.+|++++..|...|. +|.+++|+.... +.++..+.....++. +.++|+||.++|..
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~g 186 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIG 186 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCC
Confidence 47899999999999999999999998 799999975332 233344443222222 46899999999954
No 223
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.05 E-value=1.2e-05 Score=66.54 Aligned_cols=81 Identities=7% Similarity=0.054 Sum_probs=57.8
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEE-EEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHH
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRI 115 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~-~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~ 115 (221)
+||+|+|+|+||+.+++.+...+.++. ++|++.. ...++..++++++++ ++|+|+-+++ |+.. .+.+
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~-----~~~gv~v~~dl~~l~-~~DVvIDft~--p~a~----~~~~ 71 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPK-----ATTPYQQYQHIADVK-GADVAIDFSN--PNLL----FPLL 71 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-------CCSCBCSCTTTCT-TCSEEEECSC--HHHH----HHHH
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCcc-----ccCCCceeCCHHHHh-CCCEEEEeCC--hHHH----HHHH
Confidence 689999999999999999987655755 4787653 135777778899988 9999885543 2211 1233
Q ss_pred hcCCCCCEEEEcCCC
Q 027577 116 AKMKKGVLIVNNARG 130 (221)
Q Consensus 116 ~~mk~ga~lIn~srg 130 (221)
. ++.|.-+|..+.|
T Consensus 72 ~-l~~g~~vVigTTG 85 (243)
T 3qy9_A 72 D-EDFHLPLVVATTG 85 (243)
T ss_dssp T-SCCCCCEEECCCS
T ss_pred H-HhcCCceEeCCCC
Confidence 3 7788878877676
No 224
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=98.04 E-value=1e-05 Score=72.44 Aligned_cols=111 Identities=17% Similarity=0.162 Sum_probs=78.9
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccCCC---eEEEEc----CC--CCChhH---HHh--------cCce-ecCCHHhh
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC---NLLYHD----RV--KMDPQL---EKE--------TGAK-FEEDLDTM 89 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~---~V~~~d----~~--~~~~~~---~~~--------~g~~-~~~~l~el 89 (221)
+..+.++++.|+|.|..|+++++.|...|. +|+++| |+ ....+. +.. .+.. ...++.+.
T Consensus 181 g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~ 260 (439)
T 2dvm_A 181 GKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEA 260 (439)
T ss_dssp TCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHH
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHH
Confidence 346889999999999999999999999998 799999 76 111111 111 1110 13468899
Q ss_pred cCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCC
Q 027577 90 LPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGH 146 (221)
Q Consensus 90 l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~ 146 (221)
++++|+|+.++|..+ +++.++.++.|+++.++++++ .+..+.-+.++.+.|.
T Consensus 261 l~~aDVlInaT~~~~---G~~~~e~v~~m~~~~iVfDLy--nP~~t~~~~~A~~~G~ 312 (439)
T 2dvm_A 261 LKDADVLISFTRPGP---GVIKPQWIEKMNEDAIVFPLA--NPVPEILPEEAKKAGA 312 (439)
T ss_dssp HTTCSEEEECSCCCS---SSSCHHHHTTSCTTCEEEECC--SSSCSSCHHHHHHHTC
T ss_pred hccCCEEEEcCCCcc---CCCChHHHHhcCCCCEEEECC--CCCCcchHHHHHHcCC
Confidence 999999999998421 455556778899999999994 3344555555666564
No 225
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.04 E-value=7e-06 Score=71.54 Aligned_cols=107 Identities=18% Similarity=0.115 Sum_probs=65.0
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcC------ceecCCHHhhcCCCCEEEEeCCCChhh
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG------AKFEEDLDTMLPKCDIVVVNTPLTEKT 106 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g------~~~~~~l~ell~~aDvVv~~~p~~~~t 106 (221)
+-+.+||+|+|+|.+|+.+|+.|.. ..+|.+.|++....+...+.. +.-.+++.++++++|+|+.++|.. .
T Consensus 13 ~g~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~--~ 89 (365)
T 3abi_A 13 EGRHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGF--L 89 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG--G
T ss_pred cCCccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc--c
Confidence 3446689999999999999999976 478999998653333332211 111234677889999999999932 2
Q ss_pred hhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCC
Q 027577 107 RGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGH 146 (221)
Q Consensus 107 ~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~ 146 (221)
...+. -.+++.|..+++++ ...-...+|.+..++..
T Consensus 90 ~~~v~---~~~~~~g~~yvD~s-~~~~~~~~l~~~a~~~g 125 (365)
T 3abi_A 90 GFKSI---KAAIKSKVDMVDVS-FMPENPLELRDEAEKAQ 125 (365)
T ss_dssp HHHHH---HHHHHHTCEEEECC-CCSSCGGGGHHHHHHTT
T ss_pred cchHH---HHHHhcCcceEeee-ccchhhhhhhhhhccCC
Confidence 21122 23345677888876 22233344444444433
No 226
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=98.04 E-value=3e-06 Score=74.77 Aligned_cols=84 Identities=19% Similarity=0.290 Sum_probs=68.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHccCCC---eEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcc
Q 027577 35 EGKTVGTVGC-GRIGKLLLQRLKPFNC---NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF 110 (221)
Q Consensus 35 ~g~~vgIIG~-G~iG~~iA~~l~~~G~---~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i 110 (221)
..-+|.|||. |..|+..++.++.+|. .|.++|++... .|.. + +.+.++|+||.|+......-.++
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~------~g~~----~-~~i~~aDivIn~vlig~~aP~Lv 281 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETS------RGGP----F-DEIPQADIFINCIYLSKPIAPFT 281 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHT------TCSC----C-THHHHSSEEEECCCCCSSCCCSC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccc------cCCc----h-hhHhhCCEEEECcCcCCCCCccc
Confidence 3568999999 9999999999999998 89999975311 1221 2 23558999999998766666789
Q ss_pred hHHHHhcC-CCCCEEEEcCC
Q 027577 111 DKDRIAKM-KKGVLIVNNAR 129 (221)
Q Consensus 111 ~~~~~~~m-k~ga~lIn~sr 129 (221)
.++.++.| |+|++|||++-
T Consensus 282 t~e~v~~m~k~gsVIVDVA~ 301 (394)
T 2qrj_A 282 NMEKLNNPNRRLRTVVDVSA 301 (394)
T ss_dssp CHHHHCCTTCCCCEEEETTC
T ss_pred CHHHHhcCcCCCeEEEEEec
Confidence 99999999 99999999963
No 227
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=98.03 E-value=1.4e-05 Score=69.50 Aligned_cols=64 Identities=20% Similarity=0.242 Sum_probs=49.5
Q ss_pred CEEEEEccCHHHHH-HHHHHccC-CCeEE-EEcCCCCChhHHHhc-CceecCCHHhhcCC--CCEEEEeCCC
Q 027577 37 KTVGTVGCGRIGKL-LLQRLKPF-NCNLL-YHDRVKMDPQLEKET-GAKFEEDLDTMLPK--CDIVVVNTPL 102 (221)
Q Consensus 37 ~~vgIIG~G~iG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~-g~~~~~~l~ell~~--aDvVv~~~p~ 102 (221)
.+|||||+|.||+. .+..++.. +++|. ++|+++.. ..+.. ++..+.++++++++ .|+|++|+|.
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~--~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 75 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKEL--SKERYPQASIVRSFKELTEDPEIDLIVVNTPD 75 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCG--GGTTCTTSEEESCSHHHHTCTTCCEEEECSCG
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH--HHHhCCCCceECCHHHHhcCCCCCEEEEeCCh
Confidence 58999999999997 77777665 67765 67876533 33444 56777899999976 9999999993
No 228
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=98.02 E-value=1.4e-05 Score=69.07 Aligned_cols=65 Identities=18% Similarity=0.356 Sum_probs=50.0
Q ss_pred CEEEEEccCHHHH-HHHHHHccC-CCeEE-EEcCCCCChhHHHh---cCceecCCHHhhcCC--CCEEEEeCCC
Q 027577 37 KTVGTVGCGRIGK-LLLQRLKPF-NCNLL-YHDRVKMDPQLEKE---TGAKFEEDLDTMLPK--CDIVVVNTPL 102 (221)
Q Consensus 37 ~~vgIIG~G~iG~-~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~---~g~~~~~~l~ell~~--aDvVv~~~p~ 102 (221)
.+|||||+|.||+ ..+..++.. +++|. ++|++ ...+.++. .++..+.++++++++ .|+|++|+|.
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 75 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPA 75 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCG
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCc
Confidence 4899999999998 577777665 67764 67876 34444444 466777899999976 9999999994
No 229
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=98.02 E-value=7.1e-06 Score=70.45 Aligned_cols=66 Identities=14% Similarity=0.142 Sum_probs=50.3
Q ss_pred CEEEEEccCHHHHHHHHHHccCC---Ce-EEEEcCCCCCh-hHHHhcCc-eecCCHHhhcC--CCCEEEEeCCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFN---CN-LLYHDRVKMDP-QLEKETGA-KFEEDLDTMLP--KCDIVVVNTPL 102 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G---~~-V~~~d~~~~~~-~~~~~~g~-~~~~~l~ell~--~aDvVv~~~p~ 102 (221)
.+|||||+|.||+.+++.++..+ ++ +.++|++.... +.++..++ ..+.+++++++ +.|+|++++|.
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 76 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQH 76 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCG
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCc
Confidence 48999999999999999998654 45 44678764332 34455676 45789999996 69999999993
No 230
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=98.02 E-value=1.8e-05 Score=68.61 Aligned_cols=67 Identities=21% Similarity=0.251 Sum_probs=49.1
Q ss_pred CCEEEEEccCHHHHHHHHHHccC--------CCeE-EEEcCCCCChh-HHHhcCce-ecCCHHhhcC--CCCEEEEeCCC
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPF--------NCNL-LYHDRVKMDPQ-LEKETGAK-FEEDLDTMLP--KCDIVVVNTPL 102 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~--------G~~V-~~~d~~~~~~~-~~~~~g~~-~~~~l~ell~--~aDvVv~~~p~ 102 (221)
--+|||||+|.||+..++.++.. +++| .++|+++...+ .++++++. .+++++++++ +.|+|++|+|.
T Consensus 25 kirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~IatP~ 104 (393)
T 4fb5_A 25 PLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTTPN 104 (393)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECSCG
T ss_pred CccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECCCh
Confidence 34899999999999888877543 4664 46788765544 45566764 6789999985 58999999993
No 231
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=98.00 E-value=2.1e-05 Score=67.22 Aligned_cols=65 Identities=17% Similarity=0.167 Sum_probs=50.8
Q ss_pred CEEEEEcc-CHHHHHHHHHHccCCCeE-EEEcCCCCChhHHHhc-CceecCCHHhhc----------CCCCEEEEeCC
Q 027577 37 KTVGTVGC-GRIGKLLLQRLKPFNCNL-LYHDRVKMDPQLEKET-GAKFEEDLDTML----------PKCDIVVVNTP 101 (221)
Q Consensus 37 ~~vgIIG~-G~iG~~iA~~l~~~G~~V-~~~d~~~~~~~~~~~~-g~~~~~~l~ell----------~~aDvVv~~~p 101 (221)
.+|||||+ |.||+..++.++..+.++ .++|+++......+.. +...+.++++++ ++.|+|++|+|
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP 81 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASP 81 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSC
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCC
Confidence 58999999 789999999998888874 5678876543333332 456678899987 67999999999
No 232
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.99 E-value=5.3e-06 Score=72.14 Aligned_cols=66 Identities=23% Similarity=0.221 Sum_probs=49.4
Q ss_pred CCEEEEEccCHHHHH-HHHHHccC-CCeEE-EEcCCCCChhHH-Hhc-CceecCCHHhhcC--CCCEEEEeCC
Q 027577 36 GKTVGTVGCGRIGKL-LLQRLKPF-NCNLL-YHDRVKMDPQLE-KET-GAKFEEDLDTMLP--KCDIVVVNTP 101 (221)
Q Consensus 36 g~~vgIIG~G~iG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~-~~~-g~~~~~~l~ell~--~aDvVv~~~p 101 (221)
..+|||||+|.||+. +++.++.. ++++. ++|+++...+.+ +.. +...+.+++++++ +.|+|++|+|
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 77 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGP 77 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSC
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCC
Confidence 358999999999995 88888765 67765 778865433322 333 3556789999996 4699999999
No 233
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.98 E-value=3.5e-05 Score=66.23 Aligned_cols=64 Identities=22% Similarity=0.272 Sum_probs=48.4
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhH----HHh----c----CceecCCHHhhcCCCCEEEEeC
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQL----EKE----T----GAKFEEDLDTMLPKCDIVVVNT 100 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~----~~~----~----g~~~~~~l~ell~~aDvVv~~~ 100 (221)
.+||+|||.|.||..+|..+...|+ +|..+|.++...+. ... . .+....++ +.+++||+|+++.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTA 80 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeC
Confidence 3689999999999999999988888 89999987643221 010 1 13333577 7789999999998
No 234
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.98 E-value=7.8e-06 Score=72.72 Aligned_cols=92 Identities=16% Similarity=0.184 Sum_probs=64.1
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec----CC---HHhh-cCCCCEEEEeCCCChhhh
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----ED---LDTM-LPKCDIVVVNTPLTEKTR 107 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~----~~---l~el-l~~aDvVv~~~p~~~~t~ 107 (221)
+++|.|+|+|.+|+.+++.|...|.+|+++|+++...+.++..|+..+ .+ ++++ +.++|+|+++++..+.+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~ 83 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNL 83 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHH
Confidence 457999999999999999999999999999987655555555565322 22 2333 678999999998544433
Q ss_pred hcchHHHHhcCCCCCEEEEcCC
Q 027577 108 GMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn~sr 129 (221)
. -......+.+...+|--++
T Consensus 84 ~--i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 84 Q--LTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp H--HHHHHHHHCTTCEEEEEES
T ss_pred H--HHHHHHHhCCCCeEEEEEC
Confidence 2 2334555666655554433
No 235
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=97.98 E-value=2.6e-05 Score=66.38 Aligned_cols=94 Identities=14% Similarity=0.212 Sum_probs=59.7
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCC--eEEEEcCCCCChh--HHH-hcC------ce--ecCCHHhhcCCCCEEEEeCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ--LEK-ETG------AK--FEEDLDTMLPKCDIVVVNTP 101 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~--~~~-~~g------~~--~~~~l~ell~~aDvVv~~~p 101 (221)
..++|+|||.|.||..+|..|...|+ +|.++|++....+ ..+ ..+ .. ...+. +.++.+|+|+++++
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~aD~Vii~v~ 84 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP-EICRDADMVVITAG 84 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG-GGGTTCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCH-HHhCCCCEEEECCC
Confidence 35799999999999999999998898 9999998642222 111 111 11 11243 56789999999995
Q ss_pred CChhh-----------hh---cchHHHHhcCCCCCEEEEcCCC
Q 027577 102 LTEKT-----------RG---MFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 102 ~~~~t-----------~~---~i~~~~~~~mk~ga~lIn~srg 130 (221)
..... .. -+-++ +....+++++|+++-|
T Consensus 85 ~~~~~g~~r~~~~~~n~~~~~~~~~~-i~~~~~~~~vi~~~Np 126 (319)
T 1lld_A 85 PRQKPGQSRLELVGATVNILKAIMPN-LVKVAPNAIYMLITNP 126 (319)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHH-HHHHCTTSEEEECCSS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHH-HHHhCCCceEEEecCc
Confidence 32110 00 11112 2223688999988665
No 236
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.97 E-value=1.6e-05 Score=70.93 Aligned_cols=107 Identities=17% Similarity=0.208 Sum_probs=66.7
Q ss_pred CEEEEEccCHHHH-HHHHHHccC-CCeE-EEEcCCCCChh-HHHhcCce-----ecCCHHhhcC--CCCEEEEeCCCChh
Q 027577 37 KTVGTVGCGRIGK-LLLQRLKPF-NCNL-LYHDRVKMDPQ-LEKETGAK-----FEEDLDTMLP--KCDIVVVNTPLTEK 105 (221)
Q Consensus 37 ~~vgIIG~G~iG~-~iA~~l~~~-G~~V-~~~d~~~~~~~-~~~~~g~~-----~~~~l~ell~--~aDvVv~~~p~~~~ 105 (221)
.+|||||+|.||+ .+++.+... ++++ .++|++....+ .++..|+. .+.+++++++ ++|+|++++|...
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~~~- 162 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSL- 162 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGGG-
T ss_pred eEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCchh-
Confidence 5899999999997 899988765 5675 57787653322 33445653 4678999987 7999999999322
Q ss_pred hhhcchHHHHhcCCCCCEEEEcC--CCCccCHHHHHHHHHhCCce
Q 027577 106 TRGMFDKDRIAKMKKGVLIVNNA--RGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 106 t~~~i~~~~~~~mk~ga~lIn~s--rg~~vd~~al~~al~~g~i~ 148 (221)
. -+.....++.|..|+.-- .-.+-+.+.|.++.++.++.
T Consensus 163 -h---~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~ 203 (433)
T 1h6d_A 163 -H---AEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKK 203 (433)
T ss_dssp -H---HHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCC
T ss_pred -H---HHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCCe
Confidence 2 122233455666444321 12223344566666554444
No 237
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.97 E-value=2.4e-05 Score=67.02 Aligned_cols=66 Identities=18% Similarity=0.220 Sum_probs=50.9
Q ss_pred CEEEEEcc-CHHHHHHHHHHccCCCeE-EEEcCCCCChhHHHhc-CceecCCHHhhc-----------CCCCEEEEeCCC
Q 027577 37 KTVGTVGC-GRIGKLLLQRLKPFNCNL-LYHDRVKMDPQLEKET-GAKFEEDLDTML-----------PKCDIVVVNTPL 102 (221)
Q Consensus 37 ~~vgIIG~-G~iG~~iA~~l~~~G~~V-~~~d~~~~~~~~~~~~-g~~~~~~l~ell-----------~~aDvVv~~~p~ 102 (221)
.+|||||+ |.||+..++.++..+.++ .++|+++......... +...+.++++++ ++.|+|++++|.
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~ 83 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPN 83 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSCG
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCCc
Confidence 58999999 789999999998888874 5678776543333333 456677899887 569999999993
No 238
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.97 E-value=1.5e-05 Score=68.89 Aligned_cols=67 Identities=16% Similarity=0.165 Sum_probs=48.7
Q ss_pred CEEEEEccCHHHHH-HHHHHccC-CCeEE-EEcCCCCChhHHHhcCceecCCHHhhcCC--CCEEEEeCCCCh
Q 027577 37 KTVGTVGCGRIGKL-LLQRLKPF-NCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLPK--CDIVVVNTPLTE 104 (221)
Q Consensus 37 ~~vgIIG~G~iG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~g~~~~~~l~ell~~--aDvVv~~~p~~~ 104 (221)
.+|||||+|.||+. .+..++.. +++|. ++|+++...+ ....++..+.++++++++ .|+|++|+|...
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~-~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 79 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVH-ADWPAIPVVSDPQMLFNDPSIDLIVIPTPNDT 79 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH-TTCSSCCEESCHHHHHHCSSCCEEEECSCTTT
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHH-hhCCCCceECCHHHHhcCCCCCEEEEeCChHH
Confidence 58999999999997 78877765 67765 6777542221 111245667899999965 999999999443
No 239
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.96 E-value=1.5e-05 Score=67.88 Aligned_cols=113 Identities=17% Similarity=0.272 Sum_probs=65.9
Q ss_pred CEEEEEccCHHHHHHHHHHccCCC--eEEEEcCCCCChhH-HHhc--------Ccee-cCCHHhhcCCCCEEEEeCCCCh
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQL-EKET--------GAKF-EEDLDTMLPKCDIVVVNTPLTE 104 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~-~~~~--------g~~~-~~~l~ell~~aDvVv~~~p~~~ 104 (221)
+||+|||.|.||..+|..+...|+ +|.++|+++...+. ..+. .... ..+ .+.+++||+|+++++...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~-~~a~~~aDvVIi~~~~~~ 79 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGG-HSELADAQVVILTAGANQ 79 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEEC-GGGGTTCSEEEECC----
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECC-HHHhCCCCEEEEcCCCCC
Confidence 589999999999999999998898 99999986432211 1111 1111 134 356899999999995322
Q ss_pred h-----------hhhcchH--HHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEE
Q 027577 105 K-----------TRGMFDK--DRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGY 150 (221)
Q Consensus 105 ~-----------t~~~i~~--~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a 150 (221)
. +..++.. +.+....|++++|+++-..-+....+.+.....++.|.
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~~~~~~~~~~~~~rviG~ 138 (304)
T 2v6b_A 80 KPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLATQLAPGQPVIGS 138 (304)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHHHHHHHHHHSCSSCEEEC
T ss_pred CCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHHHHHHHHHhCChhcEEeC
Confidence 1 1111110 12233368999998765433333334444444455444
No 240
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.93 E-value=3.1e-05 Score=69.21 Aligned_cols=67 Identities=19% Similarity=0.281 Sum_probs=49.8
Q ss_pred CCEEEEEccCHHHHHHHHHHccC-CCeE-EEEcCCCCChhHHH----hcC---ceecC----CHHhhcC--CCCEEEEeC
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPF-NCNL-LYHDRVKMDPQLEK----ETG---AKFEE----DLDTMLP--KCDIVVVNT 100 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~-G~~V-~~~d~~~~~~~~~~----~~g---~~~~~----~l~ell~--~aDvVv~~~ 100 (221)
-.+|||||+|.||+..++.+... +++| .++|+++...+.+. +.| ...+. +++++++ +.|+|++++
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~t 99 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSS 99 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECC
T ss_pred CceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcC
Confidence 35899999999999999988765 6775 46787654333222 234 45566 8999997 599999999
Q ss_pred CC
Q 027577 101 PL 102 (221)
Q Consensus 101 p~ 102 (221)
|.
T Consensus 100 p~ 101 (444)
T 2ixa_A 100 PW 101 (444)
T ss_dssp CG
T ss_pred Cc
Confidence 93
No 241
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.92 E-value=1.6e-05 Score=64.65 Aligned_cols=87 Identities=17% Similarity=0.237 Sum_probs=58.3
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec----CC---HHhh-cCCCCEEEEeCCCChhhh
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----ED---LDTM-LPKCDIVVVNTPLTEKTR 107 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~----~~---l~el-l~~aDvVv~~~p~~~~t~ 107 (221)
.+++.|+|+|.+|+.+++.|...|+ |+++|+++...+.+. .++..+ .+ ++++ ++++|.|++++|..+.+
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n- 85 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSET- 85 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHHH-
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHHH-
Confidence 5689999999999999999999999 999998754333333 444321 22 2333 78899999999854333
Q ss_pred hcchHHHHhcCCCCCEEEE
Q 027577 108 GMFDKDRIAKMKKGVLIVN 126 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn 126 (221)
+.-....+.+.++..+|.
T Consensus 86 -~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 86 -IHCILGIRKIDESVRIIA 103 (234)
T ss_dssp -HHHHHHHHHHCSSSEEEE
T ss_pred -HHHHHHHHHHCCCCeEEE
Confidence 333344555667644443
No 242
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=97.90 E-value=3.9e-05 Score=65.19 Aligned_cols=79 Identities=22% Similarity=0.337 Sum_probs=64.4
Q ss_pred ccCCCCCEEEEEccCH-HHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhc
Q 027577 31 AYDLEGKTVGTVGCGR-IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGM 109 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~-iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~ 109 (221)
+.++.||++.|||-++ +|+.+|..|...++.|..+.... .++.+.+++||+|+.++. ..++
T Consensus 174 ~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T--------------~dl~~~~~~ADIvV~A~G----~p~~ 235 (303)
T 4b4u_A 174 NIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRT--------------QNLPELVKQADIIVGAVG----KAEL 235 (303)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SSHHHHHHTCSEEEECSC----STTC
T ss_pred CCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCC--------------CCHHHHhhcCCeEEeccC----CCCc
Confidence 4579999999999765 79999999999999999887532 368888999999999986 2345
Q ss_pred chHHHHhcCCCCCEEEEcCCC
Q 027577 110 FDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 110 i~~~~~~~mk~ga~lIn~srg 130 (221)
+..+ ..|+|+++||++--
T Consensus 236 i~~d---~vk~GavVIDVGin 253 (303)
T 4b4u_A 236 IQKD---WIKQGAVVVDAGFH 253 (303)
T ss_dssp BCGG---GSCTTCEEEECCCB
T ss_pred cccc---cccCCCEEEEecee
Confidence 6654 46899999999853
No 243
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.89 E-value=2e-05 Score=67.86 Aligned_cols=65 Identities=17% Similarity=0.281 Sum_probs=48.7
Q ss_pred EEEEEccCHHHHH-HHHHHccC-CCeEE-EEcCCCCC-hhHHHhcCce-ecCCHHhhcC--CCCEEEEeCCC
Q 027577 38 TVGTVGCGRIGKL-LLQRLKPF-NCNLL-YHDRVKMD-PQLEKETGAK-FEEDLDTMLP--KCDIVVVNTPL 102 (221)
Q Consensus 38 ~vgIIG~G~iG~~-iA~~l~~~-G~~V~-~~d~~~~~-~~~~~~~g~~-~~~~l~ell~--~aDvVv~~~p~ 102 (221)
||||||+|.||+. ++..++.. +++|. ++|+++.. .+.++++|+. .+++++++++ +.|+|++|+|.
T Consensus 25 rigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~ 96 (350)
T 4had_A 25 RFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPT 96 (350)
T ss_dssp EEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCG
T ss_pred EEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCC
Confidence 8999999999986 46667654 67765 57876533 2345567774 5789999984 58999999993
No 244
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=97.89 E-value=2.6e-05 Score=68.39 Aligned_cols=111 Identities=13% Similarity=0.077 Sum_probs=69.1
Q ss_pred CCEEEEEccCHHHHHHHHHHccC--CCeEE-EEcCCCCC-hhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcch
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPF--NCNLL-YHDRVKMD-PQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 111 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~--G~~V~-~~d~~~~~-~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~ 111 (221)
-.||||||+| +|+..++.++.. ++++. ++|++... .+.+++.|+..++++++++++.|++++++|...... .--
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~~~h~~-~~~ 84 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRSTVAGG-AGT 84 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC--CTTS-HHH
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCCcccch-hHH
Confidence 4589999999 799988888765 57755 56876533 345667899888999999999999999999432100 001
Q ss_pred HHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 112 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 112 ~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
+-....|+.|.-|+.=-=-.+-+.++|.++.++.++.
T Consensus 85 ~~a~~al~aGkhVl~EKPl~~~ea~~l~~~A~~~g~~ 121 (372)
T 4gmf_A 85 QLARHFLARGVHVIQEHPLHPDDISSLQTLAQEQGCC 121 (372)
T ss_dssp HHHHHHHHTTCEEEEESCCCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHcCCE
Confidence 1122334445444332111222344566666655555
No 245
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.89 E-value=3.5e-05 Score=65.22 Aligned_cols=105 Identities=14% Similarity=0.161 Sum_probs=70.3
Q ss_pred CCEEEEEcc-CHHHHHHHHHHccCCCeEE-EEcCCCCChhHHHhcCceecCCHHhhcC--CCCEEEEeCCCChhhhhcch
Q 027577 36 GKTVGTVGC-GRIGKLLLQRLKPFNCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGMFD 111 (221)
Q Consensus 36 g~~vgIIG~-G~iG~~iA~~l~~~G~~V~-~~d~~~~~~~~~~~~g~~~~~~l~ell~--~aDvVv~~~p~~~~t~~~i~ 111 (221)
..+|+|+|+ |++|+.+++.+...|++++ .+|+..... ...|+..+.+++++.+ ..|++++++|. +.....+
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~---~~~G~~vy~sl~el~~~~~~D~viI~tP~-~~~~~~~- 81 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGT---THLGLPVFNTVREAVAATGATASVIYVPA-PFCKDSI- 81 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC---EETTEEEESSHHHHHHHHCCCEEEECCCG-GGHHHHH-
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccc---eeCCeeccCCHHHHhhcCCCCEEEEecCH-HHHHHHH-
Confidence 568999998 9999999999988899843 566642111 1357777889999998 89999999992 2222222
Q ss_pred HHHHhcCCCC-CEEEEcCCCCc-cCHHHHHHHHHhCCce
Q 027577 112 KDRIAKMKKG-VLIVNNARGAI-MDTQAVVDACSSGHIA 148 (221)
Q Consensus 112 ~~~~~~mk~g-a~lIn~srg~~-vd~~al~~al~~g~i~ 148 (221)
.+..+ .| ..+|..+-|-. -+.+.+.++.++..+.
T Consensus 82 ~ea~~---~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~ 117 (288)
T 2nu8_A 82 LEAID---AGIKLIITITEGIPTLDMLTVKVKLDEAGVR 117 (288)
T ss_dssp HHHHH---TTCSEEEECCCCCCHHHHHHHHHHHHHHTCE
T ss_pred HHHHH---CCCCEEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 22332 33 23455555532 2345788888876665
No 246
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=97.88 E-value=2.8e-05 Score=66.36 Aligned_cols=92 Identities=13% Similarity=0.179 Sum_probs=58.6
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCC--eEEEEcCCCCCh----hHHHh--cCceecCCHHhhcCCCCEEEEeCCCCh---
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDP----QLEKE--TGAKFEEDLDTMLPKCDIVVVNTPLTE--- 104 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~----~~~~~--~g~~~~~~l~ell~~aDvVv~~~p~~~--- 104 (221)
.+||+|||.|.||..+|..+...|. +|..+|.++... +.... ..+....++ +.+++||+|+++.....
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aag~~~pG~ 92 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTVNSLGSSQ 92 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECCCC----C
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcCCCCCCCC
Confidence 3799999999999999999887777 899999875321 11111 123444577 66899999999973210
Q ss_pred -------hhhhc---chHHHHhcCCCCCEEEEcCC
Q 027577 105 -------KTRGM---FDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 105 -------~t~~~---i~~~~~~~mk~ga~lIn~sr 129 (221)
.+..+ +-++ +....|++++++++-
T Consensus 93 tR~dl~~~n~~i~~~i~~~-i~~~~p~a~iiv~sN 126 (303)
T 2i6t_A 93 SYLDVVQSNVDMFRALVPA-LGHYSQHSVLLVASQ 126 (303)
T ss_dssp CHHHHHHHHHHHHHHHHHH-HHHHTTTCEEEECSS
T ss_pred CHHHHHHHHHHHHHHHHHH-HHHhCCCeEEEEcCC
Confidence 11111 1112 222348999999776
No 247
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=97.88 E-value=3.6e-05 Score=65.41 Aligned_cols=98 Identities=20% Similarity=0.187 Sum_probs=64.8
Q ss_pred CEEEEEccCHHHHHHHHHHccCCC--eEEEEcCCCCChh-----HHHh---c--C--ceecCCHHhhcCCCCEEEEeCCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ-----LEKE---T--G--AKFEEDLDTMLPKCDIVVVNTPL 102 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~-----~~~~---~--g--~~~~~~l~ell~~aDvVv~~~p~ 102 (221)
+||+|||.|.||.++|..|...|. +|..+|+++...+ ..+. . . +....+ .+.+++||+|+++.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence 589999999999999999988787 8999998653221 1111 1 1 223345 7889999999999753
Q ss_pred Chh-----------hhhcchH--HHHhcCCCCCEEEEcCCCCccCHHH
Q 027577 103 TEK-----------TRGMFDK--DRIAKMKKGVLIVNNARGAIMDTQA 137 (221)
Q Consensus 103 ~~~-----------t~~~i~~--~~~~~mk~ga~lIn~srg~~vd~~a 137 (221)
... +..++.. +.+....|++++++++ .++|.-.
T Consensus 80 ~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs--NPvd~~t 125 (294)
T 1oju_A 80 ARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDVMT 125 (294)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC--CcchHHH
Confidence 211 1111111 2344457899999998 5666433
No 248
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.86 E-value=0.00011 Score=62.89 Aligned_cols=96 Identities=17% Similarity=0.196 Sum_probs=70.2
Q ss_pred CCCCCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCC-C-hhH-HHhc--CceecCCHHhhcCCCCEEEEeC----CC
Q 027577 33 DLEGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKM-D-PQL-EKET--GAKFEEDLDTMLPKCDIVVVNT----PL 102 (221)
Q Consensus 33 ~l~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~-~-~~~-~~~~--g~~~~~~l~ell~~aDvVv~~~----p~ 102 (221)
.+.|.||++|| .+++.++++..+..+|++|.+..|... . .+. .+.. ++....+++++++++|+|..-. ..
T Consensus 151 ~l~glkva~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~smg~ 230 (309)
T 4f2g_A 151 PIRGKTVAWVGDANNMLYTWIQAARILDFKLQLSTPPGYALDAKLVDAESAPFYQVFDDPNEACKGADLVTTDVWTSMGF 230 (309)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCGGGCCCGGGSCGGGGGGEEECSSHHHHTTTCSEEEECCC-----
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecccccCcc
Confidence 58899999999 679999999999999999999987532 1 121 1122 3456789999999999998754 10
Q ss_pred ---Ch-----hhhhcchHHHHhcCCCCCEEEEcC
Q 027577 103 ---TE-----KTRGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 103 ---~~-----~t~~~i~~~~~~~mk~ga~lIn~s 128 (221)
.+ -...-++.+.++.+|++++|+.+.
T Consensus 231 e~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~l 264 (309)
T 4f2g_A 231 EAENEARKRAFADWCVDEEMMSHANSDALFMHCL 264 (309)
T ss_dssp -------CCSGGGGCBCHHHHTTSCTTCEEEECS
T ss_pred hhhHHHHHHHhcCceeCHHHHHhcCCCeEEECCC
Confidence 00 012346888888889999888864
No 249
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=97.84 E-value=1.6e-05 Score=71.37 Aligned_cols=67 Identities=16% Similarity=0.138 Sum_probs=48.9
Q ss_pred CCCEEEEEccCHH--HHHHHHHHcc----CCCeEEEEcCCCCChhHHHh---------cCceecCCHHhhcCCCCEEEEe
Q 027577 35 EGKTVGTVGCGRI--GKLLLQRLKP----FNCNLLYHDRVKMDPQLEKE---------TGAKFEEDLDTMLPKCDIVVVN 99 (221)
Q Consensus 35 ~g~~vgIIG~G~i--G~~iA~~l~~----~G~~V~~~d~~~~~~~~~~~---------~g~~~~~~l~ell~~aDvVv~~ 99 (221)
+.+||+|||.|++ |..++..+.. .| +|..||+.+...+.... ..+....+++++++.||+|+++
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~a 82 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIIS 82 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEec
Confidence 4579999999996 6788877653 46 99999986532221111 1244567899999999999999
Q ss_pred CCC
Q 027577 100 TPL 102 (221)
Q Consensus 100 ~p~ 102 (221)
++.
T Consensus 83 irv 85 (450)
T 3fef_A 83 ILP 85 (450)
T ss_dssp CCS
T ss_pred ccc
Confidence 963
No 250
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.83 E-value=1.1e-05 Score=72.85 Aligned_cols=109 Identities=18% Similarity=0.175 Sum_probs=65.4
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccC-CCeEEEEcCCCCChhHHH-hcCcee--c-----CCHHhhcCCCCEEEEeCC
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPF-NCNLLYHDRVKMDPQLEK-ETGAKF--E-----EDLDTMLPKCDIVVVNTP 101 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~-G~~V~~~d~~~~~~~~~~-~~g~~~--~-----~~l~ell~~aDvVv~~~p 101 (221)
...+.+++|+|+|.|.+|+.+++.|... |.+|.+++|+....+... ..++.. . +++.++++.+|+|+.++|
T Consensus 18 ~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp 97 (467)
T 2axq_A 18 EGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIP 97 (467)
T ss_dssp -----CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSC
T ss_pred ccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCc
Confidence 4568899999999999999999999877 789999999753322222 223321 1 145567789999999999
Q ss_pred CChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhC
Q 027577 102 LTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 145 (221)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g 145 (221)
.... .-+.. ..++++..+++++--.. +...|.++.++.
T Consensus 98 ~~~~--~~v~~---a~l~~g~~vvd~~~~~p-~~~~Ll~~Ak~a 135 (467)
T 2axq_A 98 YTFH--PNVVK---SAIRTKTDVVTSSYISP-ALRELEPEIVKA 135 (467)
T ss_dssp GGGH--HHHHH---HHHHHTCEEEECSCCCH-HHHHHHHHHHHH
T ss_pred hhhh--HHHHH---HHHhcCCEEEEeecCCH-HHHHHHHHHHHc
Confidence 4321 11222 23455677777643111 234455544443
No 251
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=97.82 E-value=0.00019 Score=62.10 Aligned_cols=96 Identities=15% Similarity=0.225 Sum_probs=70.9
Q ss_pred CCCCCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCCCh-h-H-------HHhcC--ceecCCHHhhcCCCCEEEEeC
Q 027577 33 DLEGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDP-Q-L-------EKETG--AKFEEDLDTMLPKCDIVVVNT 100 (221)
Q Consensus 33 ~l~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~-~-~-------~~~~g--~~~~~~l~ell~~aDvVv~~~ 100 (221)
.+.|.||++|| .+++.++++..+..+|++|.+..|....+ + . ++..| +....+++++++++|+|..-.
T Consensus 176 ~l~glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDVvyt~~ 255 (340)
T 4ep1_A 176 TFKGIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDV 255 (340)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhCCCCEEEecC
Confidence 48999999999 57899999999999999999998864222 1 1 12345 455689999999999998754
Q ss_pred CCCh------h-----hhhcchHHHHhcCCCCCEEEEcC
Q 027577 101 PLTE------K-----TRGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 101 p~~~------~-----t~~~i~~~~~~~mk~ga~lIn~s 128 (221)
=... + ...-++.+.++.+|++++|+.+.
T Consensus 256 w~smg~e~~~~~~~~~~~y~vt~ell~~ak~dai~MHcL 294 (340)
T 4ep1_A 256 WMSMGQEGEEEKYTLFQPYQINKELVKHAKQTYHFLHCL 294 (340)
T ss_dssp C------CHHHHHHHHGGGCBCHHHHTTSCTTCEEEECS
T ss_pred ccCCCCCchHHHHHHhccccCCHHHHHhcCCCcEEECCC
Confidence 2211 0 12346888888889999988875
No 252
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=97.81 E-value=6.4e-05 Score=64.74 Aligned_cols=92 Identities=16% Similarity=0.165 Sum_probs=72.7
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec-CCHHhhcCCCCEEEEeCCCChhhhhcchHH
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-EDLDTMLPKCDIVVVNTPLTEKTRGMFDKD 113 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~~l~ell~~aDvVv~~~p~~~~t~~~i~~~ 113 (221)
.|.+|.|+|.|.+|...++.++.+|.+|++.++++...+.++++|...+ .+.+++.+..|+|+-++.... .-..
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~-----~~~~ 250 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHY-----DLKD 250 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCC-----CHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHH-----HHHH
Confidence 5899999999999999999999999999999988888888888886532 344444457999998887321 2345
Q ss_pred HHhcCCCCCEEEEcCCCC
Q 027577 114 RIAKMKKGVLIVNNARGA 131 (221)
Q Consensus 114 ~~~~mk~ga~lIn~srg~ 131 (221)
.+..++++..++.++...
T Consensus 251 ~~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 251 YLKLLTYNGDLALVGLPP 268 (348)
T ss_dssp HHTTEEEEEEEEECCCCC
T ss_pred HHHHHhcCCEEEEECCCC
Confidence 678899999999987543
No 253
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.81 E-value=8.6e-05 Score=60.63 Aligned_cols=91 Identities=20% Similarity=0.190 Sum_probs=60.8
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhH---HHhcCceec--CCHHhhcCCCCEEEEeCCCChh
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQL---EKETGAKFE--EDLDTMLPKCDIVVVNTPLTEK 105 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~---~~~~g~~~~--~~l~ell~~aDvVv~~~p~~~~ 105 (221)
..+|.|++|.|||.|.+|..-++.|...|.+|+++++... .+. ....++... .-.++.+..+|+|+.++. +++
T Consensus 26 fl~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~-~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~-d~~ 103 (223)
T 3dfz_A 26 MLDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVS-AEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATN-DQA 103 (223)
T ss_dssp EECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCC-HHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCC-CTH
T ss_pred EEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCC-HHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCC-CHH
Confidence 3479999999999999999999999999999999998542 221 122223321 112356788999987765 333
Q ss_pred hhhcchHHHHhcCCCCCEEEEcC
Q 027577 106 TRGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 106 t~~~i~~~~~~~mk~ga~lIn~s 128 (221)
. +.......+ -.++||+.
T Consensus 104 ~----N~~I~~~ak-~gi~VNvv 121 (223)
T 3dfz_A 104 V----NKFVKQHIK-NDQLVNMA 121 (223)
T ss_dssp H----HHHHHHHSC-TTCEEEC-
T ss_pred H----HHHHHHHHh-CCCEEEEe
Confidence 2 333333345 45778874
No 254
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=97.80 E-value=5.9e-05 Score=60.92 Aligned_cols=73 Identities=25% Similarity=0.288 Sum_probs=53.3
Q ss_pred ccCCCCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc-eec-----CCHHhhcCCCCEEEEeCCCC
Q 027577 31 AYDLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA-KFE-----EDLDTMLPKCDIVVVNTPLT 103 (221)
Q Consensus 31 ~~~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~-~~~-----~~l~ell~~aDvVv~~~p~~ 103 (221)
...+.||+|.|.|. |.||+.+++.|...|++|++.+|++...+.....++ ..+ +++.+.+..+|+|+.+....
T Consensus 16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~ 95 (236)
T 3e8x_A 16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGSG 95 (236)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCC
T ss_pred ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCC
Confidence 45799999999996 999999999999999999999997654443333344 321 45678888999999887643
No 255
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.80 E-value=4.1e-05 Score=69.25 Aligned_cols=66 Identities=15% Similarity=0.182 Sum_probs=51.0
Q ss_pred CCEEEEEcc----CHHHHHHHHHHccC--CCeE-EEEcCCCCChh-HHHhcCce---ecCCHHhhcC--CCCEEEEeCC
Q 027577 36 GKTVGTVGC----GRIGKLLLQRLKPF--NCNL-LYHDRVKMDPQ-LEKETGAK---FEEDLDTMLP--KCDIVVVNTP 101 (221)
Q Consensus 36 g~~vgIIG~----G~iG~~iA~~l~~~--G~~V-~~~d~~~~~~~-~~~~~g~~---~~~~l~ell~--~aDvVv~~~p 101 (221)
-.+|||||+ |.||+..++.++.. +++| .++|+++...+ .++..|+. .+.+++++++ +.|+|++|+|
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp 117 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVK 117 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSC
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCC
Confidence 358999999 99999999999876 6775 46787653332 34455653 6789999995 6999999999
No 256
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.79 E-value=2.3e-05 Score=69.10 Aligned_cols=66 Identities=20% Similarity=0.312 Sum_probs=49.3
Q ss_pred CEEEEEccCHHHHHHHHHHccC---------CCeEE-EEcCCCCCh-hHHHhcCc-eecCCHHhhcC--CCCEEEEeCCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF---------NCNLL-YHDRVKMDP-QLEKETGA-KFEEDLDTMLP--KCDIVVVNTPL 102 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~---------G~~V~-~~d~~~~~~-~~~~~~g~-~~~~~l~ell~--~aDvVv~~~p~ 102 (221)
.+|||||+|.||+..++.++.. +.+|. ++|+++... +.+++.++ ..+.+++++++ +.|+|++|+|.
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp~ 106 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSPN 106 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCG
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCCc
Confidence 4899999999999998888653 34654 568765333 34456676 46689999995 58999999993
No 257
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=97.79 E-value=0.00028 Score=60.21 Aligned_cols=96 Identities=15% Similarity=0.163 Sum_probs=71.2
Q ss_pred CCCCCEEEEEccC--HHHHHHHHHHccCCCeEEEEcCCCCCh-h-H---HH----hcC--ceecCCHHhhcCCCCEEEEe
Q 027577 33 DLEGKTVGTVGCG--RIGKLLLQRLKPFNCNLLYHDRVKMDP-Q-L---EK----ETG--AKFEEDLDTMLPKCDIVVVN 99 (221)
Q Consensus 33 ~l~g~~vgIIG~G--~iG~~iA~~l~~~G~~V~~~d~~~~~~-~-~---~~----~~g--~~~~~~l~ell~~aDvVv~~ 99 (221)
.+.|.||++||=| ++.++++..+..+|++|.+..|....+ + . ++ +.| +....+++++++++|+|...
T Consensus 145 ~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~ 224 (307)
T 2i6u_A 145 ALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTD 224 (307)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEec
Confidence 5889999999975 999999999999999999999864322 1 2 11 445 55578999999999999884
Q ss_pred CCC-------Chh-----hhhcchHHHHhcCCCCCEEEEcC
Q 027577 100 TPL-------TEK-----TRGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 100 ~p~-------~~~-----t~~~i~~~~~~~mk~ga~lIn~s 128 (221)
.=. .++ ...-++.+.++.+|++++|+.+.
T Consensus 225 ~w~smg~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~l 265 (307)
T 2i6u_A 225 TWTSMGQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHCL 265 (307)
T ss_dssp CSSCTTCTTSCCCSSGGGGGGCBCHHHHHHSCTTCEEEECS
T ss_pred ceecCCcccchHHHHHHHhhcCCCHHHHhhcCCCcEEECCC
Confidence 320 011 12346778888888888888764
No 258
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=97.79 E-value=0.0003 Score=59.85 Aligned_cols=96 Identities=16% Similarity=0.110 Sum_probs=72.7
Q ss_pred CCCCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCCh--hHHHhcCceecCCHHhhcCCCCEEEEeCCCC------
Q 027577 33 DLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDP--QLEKETGAKFEEDLDTMLPKCDIVVVNTPLT------ 103 (221)
Q Consensus 33 ~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~--~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~------ 103 (221)
.+.|.||++||= +++.++++..+..+|++|.+..|....+ +......+....+++++++++|+|....=..
T Consensus 151 ~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~~~smg~~~~ 230 (301)
T 2ef0_A 151 GLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAE 230 (301)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHTCEEESCHHHHHTTCSEEEECCCC-------
T ss_pred CcCCcEEEEECCCchhHHHHHHHHHHcCCEEEEECCchhcCCHHHHhhceeEEECCHHHHhcCCCEEEecCcccCCcccc
Confidence 588999999995 8999999999999999999999865322 2223334666789999999999998843210
Q ss_pred -hh-----hhhcchHHHHhcCCCCCEEEEcC
Q 027577 104 -EK-----TRGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 104 -~~-----t~~~i~~~~~~~mk~ga~lIn~s 128 (221)
.+ ...-++.+.++.+|++++|+.+.
T Consensus 231 ~~~~~~~~~~y~v~~e~l~~a~~~ai~mHpl 261 (301)
T 2ef0_A 231 REKRLRDFQGFQVNGELLKLLRPEGVFLHCL 261 (301)
T ss_dssp -CHHHHHTTTCCBCHHHHTTSCTTCEEEECS
T ss_pred hhHHHHHhhccccCHHHHHhcCCCcEEECCC
Confidence 01 12346788888889999999875
No 259
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=97.79 E-value=9.3e-05 Score=63.45 Aligned_cols=98 Identities=12% Similarity=0.204 Sum_probs=62.7
Q ss_pred CEEEEEccCHHHHHHHHHHccCCC--eEEEEcCCCCChh-----HHHh-----cCceec-CCHHhhcCCCCEEEEeCCCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ-----LEKE-----TGAKFE-EDLDTMLPKCDIVVVNTPLT 103 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~-----~~~~-----~g~~~~-~~l~ell~~aDvVv~~~p~~ 103 (221)
++|+|||.|.||.++|..+...|+ +|..+|+++...+ ..+. ...... .+..+.+++||+|+++.+..
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~ 80 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP 80 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence 589999999999999999987776 8999998764322 1110 122221 24567899999999997632
Q ss_pred hh-----------hhhcch--HHHHhcCCCCCEEEEcCCCCccCHH
Q 027577 104 EK-----------TRGMFD--KDRIAKMKKGVLIVNNARGAIMDTQ 136 (221)
Q Consensus 104 ~~-----------t~~~i~--~~~~~~mk~ga~lIn~srg~~vd~~ 136 (221)
.. +..++. .+.+....|++++++++ .++|.-
T Consensus 81 ~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt--NPvd~~ 124 (314)
T 3nep_X 81 RSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA--NPLDVM 124 (314)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC--SSHHHH
T ss_pred CCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC--CchhHH
Confidence 11 111111 12334457899999997 445443
No 260
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=97.78 E-value=0.00014 Score=62.63 Aligned_cols=95 Identities=15% Similarity=0.245 Sum_probs=61.8
Q ss_pred CCCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChh-----HHHh-----cC--ceecCCHHhhcCCCCEEEEeC
Q 027577 34 LEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQ-----LEKE-----TG--AKFEEDLDTMLPKCDIVVVNT 100 (221)
Q Consensus 34 l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~-----~~~~-----~g--~~~~~~l~ell~~aDvVv~~~ 100 (221)
...++|+|||.|.||..+|..+...|+ +|..+|+.+...+ ..+. .. +....+. +.+++||+|+++.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaa 83 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTA 83 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECC
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEcc
Confidence 456799999999999999999988888 9999998764321 1111 12 2333455 7899999999997
Q ss_pred CCC--hh---------hhhcchH--HHHhcCCCCCEEEEcCC
Q 027577 101 PLT--EK---------TRGMFDK--DRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 101 p~~--~~---------t~~~i~~--~~~~~mk~ga~lIn~sr 129 (221)
+.. +. +..++.. +.+....|++++++++.
T Consensus 84 g~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN 125 (324)
T 3gvi_A 84 GVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN 125 (324)
T ss_dssp SCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence 521 11 1111110 12333468999999973
No 261
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.77 E-value=4.1e-05 Score=66.40 Aligned_cols=65 Identities=18% Similarity=0.313 Sum_probs=49.6
Q ss_pred CEEEEEccCHHHHH-HHHHHccC-CCeEE-EEcCCCCChhHHHhc-CceecCCHHhhcC--CCCEEEEeCCCC
Q 027577 37 KTVGTVGCGRIGKL-LLQRLKPF-NCNLL-YHDRVKMDPQLEKET-GAKFEEDLDTMLP--KCDIVVVNTPLT 103 (221)
Q Consensus 37 ~~vgIIG~G~iG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~-g~~~~~~l~ell~--~aDvVv~~~p~~ 103 (221)
.+|||||+|.||+. .+..++.. +++|. ++|+++ ....+.. ++..+.+++++++ +.|+|++|+|..
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~--~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 76 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRT--EEVKRDFPDAEVVHELEEITNDPAIELVIVTTPSG 76 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCH--HHHHHHCTTSEEESSTHHHHTCTTCCEEEECSCTT
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCH--HHHHhhCCCCceECCHHHHhcCCCCCEEEEcCCcH
Confidence 58999999999997 78877765 67765 667754 2233344 5677789999997 799999999943
No 262
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=97.77 E-value=6e-05 Score=64.95 Aligned_cols=98 Identities=16% Similarity=0.096 Sum_probs=62.1
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCC--eEEEEcCCCCChhH----HHh------cCceecCCHHhhcCCCCEEEEeCCCC
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQL----EKE------TGAKFEEDLDTMLPKCDIVVVNTPLT 103 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~----~~~------~g~~~~~~l~ell~~aDvVv~~~p~~ 103 (221)
.++|+|||.|.||.++|..|...|. +|..+|+.....+. +.. .++....+..+.+++||+|+++.+..
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag~p 84 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGAN 84 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEecccC
Confidence 5799999999999999999988776 89999985422211 111 12222223346789999999997531
Q ss_pred --hh-hh-hcc--h----H---HHHhcCCCCCEEEEcCCCCccCH
Q 027577 104 --EK-TR-GMF--D----K---DRIAKMKKGVLIVNNARGAIMDT 135 (221)
Q Consensus 104 --~~-t~-~~i--~----~---~~~~~mk~ga~lIn~srg~~vd~ 135 (221)
+. ++ .++ + . +.+....|++++++++ .++|.
T Consensus 85 ~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt--NPvd~ 127 (326)
T 3pqe_A 85 QKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT--NPVDI 127 (326)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS--SSHHH
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC--ChHHH
Confidence 11 11 111 1 1 2233456899999997 44543
No 263
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.77 E-value=5.2e-06 Score=68.86 Aligned_cols=107 Identities=21% Similarity=0.211 Sum_probs=70.0
Q ss_pred HHHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCC-------------------Ch
Q 027577 13 GHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKM-------------------DP 72 (221)
Q Consensus 13 ~~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~-------------------~~ 72 (221)
+.++++-..|.... ...|.+++|.|||+|.+|..+|+.|...|. ++.++|+... +.
T Consensus 12 y~Rq~~l~~~g~~~----q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka 87 (249)
T 1jw9_B 12 YNRQIILRGFDFDG----QEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKV 87 (249)
T ss_dssp THHHHTSTTTHHHH----HHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHH
T ss_pred hhheecccccCHHH----HHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHH
Confidence 34555545575322 235889999999999999999999999997 7999998651 11
Q ss_pred hHH----Hhc--Cc--ee----c--CCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEc
Q 027577 73 QLE----KET--GA--KF----E--EDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNN 127 (221)
Q Consensus 73 ~~~----~~~--g~--~~----~--~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~ 127 (221)
+.+ ... ++ .. . .+++++++++|+|+.+++ +.+++..++....+. +..+|+.
T Consensus 88 ~~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~~~~l~~~~~~~---~~p~i~~ 152 (249)
T 1jw9_B 88 ESARDALTRINPHIAITPVNALLDDAELAALIAEHDLVLDCTD-NVAVRNQLNAGCFAA---KVPLVSG 152 (249)
T ss_dssp HHHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHTSSEEEECCS-SHHHHHHHHHHHHHH---TCCEEEE
T ss_pred HHHHHHHHHHCCCcEEEEEeccCCHhHHHHHHhCCCEEEEeCC-CHHHHHHHHHHHHHc---CCCEEEe
Confidence 111 111 11 11 1 134567889999999986 567777776655442 3445554
No 264
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.77 E-value=1.8e-05 Score=69.45 Aligned_cols=66 Identities=20% Similarity=0.279 Sum_probs=51.6
Q ss_pred CEEEEEccC-HHHHHHHHHHccC-CCeEE-EEcCCCCCh-hHHHhcCceecCCHHhhcC--CCCEEEEeCCC
Q 027577 37 KTVGTVGCG-RIGKLLLQRLKPF-NCNLL-YHDRVKMDP-QLEKETGAKFEEDLDTMLP--KCDIVVVNTPL 102 (221)
Q Consensus 37 ~~vgIIG~G-~iG~~iA~~l~~~-G~~V~-~~d~~~~~~-~~~~~~g~~~~~~l~ell~--~aDvVv~~~p~ 102 (221)
.+|||||+| .||..++..+... ++++. ++|+++... +.++..|+..+.+++++++ +.|+|++++|.
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~ 74 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPH 74 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCG
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCc
Confidence 589999999 9999999988765 56755 678765332 3445568887889999996 59999999993
No 265
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=97.76 E-value=0.00041 Score=59.43 Aligned_cols=96 Identities=14% Similarity=0.198 Sum_probs=72.0
Q ss_pred CCCCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCC-hh-H---HH----hcC--ceecCCHHhhcCCCCEEEEeC
Q 027577 33 DLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMD-PQ-L---EK----ETG--AKFEEDLDTMLPKCDIVVVNT 100 (221)
Q Consensus 33 ~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~-~---~~----~~g--~~~~~~l~ell~~aDvVv~~~ 100 (221)
.+.|.||++||= +++.++++..+..+|++|.+..|.... .+ . ++ +.| +....+++++++++|+|....
T Consensus 152 ~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~~ 231 (315)
T 1pvv_A 152 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDV 231 (315)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECC
T ss_pred CcCCcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEcc
Confidence 588999999995 899999999999999999999986432 21 2 11 445 455789999999999998844
Q ss_pred CC-------Chh-----hhhcchHHHHhcCCCCCEEEEcC
Q 027577 101 PL-------TEK-----TRGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 101 p~-------~~~-----t~~~i~~~~~~~mk~ga~lIn~s 128 (221)
=. .++ ...-++.+.++..|++++|+.+.
T Consensus 232 w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~l 271 (315)
T 1pvv_A 232 WASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCL 271 (315)
T ss_dssp CCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECS
T ss_pred eeccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECCC
Confidence 21 111 12346788888889999888864
No 266
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.76 E-value=3.3e-05 Score=69.34 Aligned_cols=69 Identities=20% Similarity=0.179 Sum_probs=49.4
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHH-HhcC-cee----cC---CHHhhcCCCCEEEEeCCCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLE-KETG-AKF----EE---DLDTMLPKCDIVVVNTPLT 103 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~-~~~g-~~~----~~---~l~ell~~aDvVv~~~p~~ 103 (221)
.+++|+|+|.|.||+.+++.|...|.+|.+++|+....+.. ...+ +.. .. +++++++++|+|+.++|..
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT 79 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence 47899999999999999999999999999999864322211 1111 211 12 3457788999999999853
No 267
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.76 E-value=4e-05 Score=65.66 Aligned_cols=98 Identities=14% Similarity=0.126 Sum_probs=60.0
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCC--eEEEEcCCCCChhH-----HHhc-----CceecCCHHhhcCCCCEEEEeCCCC
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQL-----EKET-----GAKFEEDLDTMLPKCDIVVVNTPLT 103 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~-----~~~~-----g~~~~~~l~ell~~aDvVv~~~p~~ 103 (221)
-+||+|||.|.||.++|..++..|. +|.++|+++...+. .+.. .+....+..+.+++||+|+++.|..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~~ 85 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGAN 85 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCCC
Confidence 4699999999999999999976664 79999986431111 1110 1111123456789999999997643
Q ss_pred hhh-----------hhcch--HHHHhcCCCCCEEEEcCCCCccCH
Q 027577 104 EKT-----------RGMFD--KDRIAKMKKGVLIVNNARGAIMDT 135 (221)
Q Consensus 104 ~~t-----------~~~i~--~~~~~~mk~ga~lIn~srg~~vd~ 135 (221)
..- ..++. .+.+....|++++++++. ++|.
T Consensus 86 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tN--Pv~~ 128 (316)
T 1ldn_A 86 QKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATN--PVDI 128 (316)
T ss_dssp CCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSS--SHHH
T ss_pred CCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCC--chHH
Confidence 210 01110 012233358899999743 5554
No 268
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.76 E-value=3.3e-05 Score=66.56 Aligned_cols=67 Identities=24% Similarity=0.405 Sum_probs=51.2
Q ss_pred CCEEEEEccC-HHHHHHHHHHccC--CCeE-EEEcCCCCChh-HHHhcCc-eecCCHHhhcC--CCCEEEEeCCC
Q 027577 36 GKTVGTVGCG-RIGKLLLQRLKPF--NCNL-LYHDRVKMDPQ-LEKETGA-KFEEDLDTMLP--KCDIVVVNTPL 102 (221)
Q Consensus 36 g~~vgIIG~G-~iG~~iA~~l~~~--G~~V-~~~d~~~~~~~-~~~~~g~-~~~~~l~ell~--~aDvVv~~~p~ 102 (221)
-.+|||||+| .+|+..+..++.. ++++ .++|+++...+ .++..++ ..+.+++++++ +.|+|++++|.
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 92 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPV 92 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCG
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCc
Confidence 3589999999 8999999999876 5675 56787653332 3445566 66789999985 69999999993
No 269
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=97.76 E-value=7e-05 Score=63.44 Aligned_cols=105 Identities=15% Similarity=0.183 Sum_probs=70.7
Q ss_pred CCEEEEEcc-CHHHHHHHHHHccCCCeEE-EEcCCCCChhHHHhcCceecCCHHhhcC--CCCEEEEeCCCChhhhhcch
Q 027577 36 GKTVGTVGC-GRIGKLLLQRLKPFNCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGMFD 111 (221)
Q Consensus 36 g~~vgIIG~-G~iG~~iA~~l~~~G~~V~-~~d~~~~~~~~~~~~g~~~~~~l~ell~--~aDvVv~~~p~~~~t~~~i~ 111 (221)
.++|+|+|+ |++|+.+++.++..|++++ .+++..... ...|+..+.+++++.+ .+|++++++|. +.+...+
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~---~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~-~~~~~~~- 81 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGM---EVLGVPVYDTVKEAVAHHEVDASIIFVPA-PAAADAA- 81 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC---EETTEEEESSHHHHHHHSCCSEEEECCCH-HHHHHHH-
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCc---eECCEEeeCCHHHHhhcCCCCEEEEecCH-HHHHHHH-
Confidence 578999998 9999999999988899843 566643111 1357777889999988 89999999992 2222223
Q ss_pred HHHHhcCCCCC-EEEEcCCCCc-cCHHHHHHHHHhCCce
Q 027577 112 KDRIAKMKKGV-LIVNNARGAI-MDTQAVVDACSSGHIA 148 (221)
Q Consensus 112 ~~~~~~mk~ga-~lIn~srg~~-vd~~al~~al~~g~i~ 148 (221)
.+..+ .|. .+|..+.|=. .+++.+.+..++..+.
T Consensus 82 ~ea~~---~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~ 117 (288)
T 1oi7_A 82 LEAAH---AGIPLIVLITEGIPTLDMVRAVEEIKALGSR 117 (288)
T ss_dssp HHHHH---TTCSEEEECCSCCCHHHHHHHHHHHHHHTCE
T ss_pred HHHHH---CCCCEEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 22322 232 2555665522 3455788888776665
No 270
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=97.75 E-value=6.8e-05 Score=65.99 Aligned_cols=158 Identities=16% Similarity=0.178 Sum_probs=100.9
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCC-----C-C-h-----hHHHhcC-ceecCCHHhhcCCCCEE
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVK-----M-D-P-----QLEKETG-AKFEEDLDTMLPKCDIV 96 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~-----~-~-~-----~~~~~~g-~~~~~~l~ell~~aDvV 96 (221)
+..+...||.|+|.|..|..+|+.+..+|. +|+++|++. . . . ..+.... .....+++|+++.+|++
T Consensus 183 g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~ 262 (398)
T 2a9f_A 183 KKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIF 262 (398)
T ss_dssp TCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSE
T ss_pred CCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCEE
Confidence 457889999999999999999999999999 899999863 1 0 1 1111111 11134689999999988
Q ss_pred EEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCCCCeEECC
Q 027577 97 VVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTP 176 (221)
Q Consensus 97 v~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~~~~~~l~~~~n~~~tP 176 (221)
+=+. ..+++.++.++.|+++++|+.+|+-.. |-.=.++.+.|... .+.=. ++.| -+..|+++-|
T Consensus 263 IG~S-----apgl~T~EmVk~Ma~~pIIfalsNPt~--E~~pe~a~~~g~~i-~atGr-------s~~p-~Q~NN~~~FP 326 (398)
T 2a9f_A 263 IGVS-----APGVLKAEWISKMAARPVIFAMANPIP--EIYPDEALEAGAYI-VGTGR-------SDFP-NQINNVLAFP 326 (398)
T ss_dssp EECC-----STTCCCHHHHHTSCSSCEEEECCSSSC--SSCHHHHHTTTCSE-EEESC-------TTSS-SBCCGGGTHH
T ss_pred EecC-----CCCCCCHHHHHhhCCCCEEEECCCCCc--cCCHHHHHHhCCeE-EEeCC-------CCCC-CcCCceeEcc
Confidence 7553 247899999999999999999998654 22222233345532 22221 1111 3445777777
Q ss_pred CCCcCCHH-------HHHHHHHHHHHHHHHcCCCC
Q 027577 177 HVSGTTID-------LRYAAGVKDMLDRYFKGEDF 204 (221)
Q Consensus 177 H~a~~t~~-------~~~~~~~~~~~~~~~~g~~~ 204 (221)
=++-.... +.|.....+.|..+...+.+
T Consensus 327 gi~~Gal~~~a~~I~d~m~~aAa~alA~~~~~~~~ 361 (398)
T 2a9f_A 327 GIFRGALDARAKTITVEMQIAAAKGIASLVPDDAL 361 (398)
T ss_dssp HHHHHHHHHTCSSCCHHHHHHHHHHHHHTCSSCSS
T ss_pred hHHHHHHHcCCcCCCHHHHHHHHHHHHhcCCcccC
Confidence 66321111 44444555666666554433
No 271
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=97.74 E-value=0.0001 Score=62.97 Aligned_cols=95 Identities=19% Similarity=0.286 Sum_probs=60.5
Q ss_pred CEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhH-HH---h----c--C--ceecCCHHhhcCCCCEEEEeCCCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQL-EK---E----T--G--AKFEEDLDTMLPKCDIVVVNTPLT 103 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~-~~---~----~--g--~~~~~~l~ell~~aDvVv~~~p~~ 103 (221)
+||+|||.|.||..++..+...|. +|..+|.++...+. .. . . . +....+. +.+++||+|+++.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~- 80 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGA- 80 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCC-
Confidence 689999999999999999988886 89999987533221 01 0 0 1 2233566 678999999999853
Q ss_pred hhhhhc-----------chHH---HHhcCCCCCEEEEcCCCCccCH
Q 027577 104 EKTRGM-----------FDKD---RIAKMKKGVLIVNNARGAIMDT 135 (221)
Q Consensus 104 ~~t~~~-----------i~~~---~~~~mk~ga~lIn~srg~~vd~ 135 (221)
+...+. +-.+ .+....|++++++++ .++|.
T Consensus 81 p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t--NPv~~ 124 (309)
T 1ur5_A 81 PRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN--NPLDA 124 (309)
T ss_dssp --------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC--SSHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC--CchHH
Confidence 211110 1111 233345889999874 35544
No 272
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=97.74 E-value=9.2e-05 Score=62.13 Aligned_cols=98 Identities=16% Similarity=0.200 Sum_probs=63.6
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhH-HHhc----CceecCCHHhhcCCCCEEEEeCCCCh
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQL-EKET----GAKFEEDLDTMLPKCDIVVVNTPLTE 104 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~-~~~~----g~~~~~~l~ell~~aDvVv~~~p~~~ 104 (221)
+.++.++++.|+|.|..+++++..|...|. +|.+++|+..+.+. ++.. .........+.++++|+|+.++|..-
T Consensus 120 g~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~Gm 199 (269)
T 3tum_A 120 GFEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPVGM 199 (269)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSSTTC
T ss_pred CCCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccCCcccc
Confidence 456889999999999999999999999996 69999997543322 2211 11112223344678999999998532
Q ss_pred hhh--hcchHHHHhcCCCCCEEEEcC
Q 027577 105 KTR--GMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 105 ~t~--~~i~~~~~~~mk~ga~lIn~s 128 (221)
... .-+....+..++++.++.|+.
T Consensus 200 ~~~~~~p~~~~~~~~l~~~~~v~D~v 225 (269)
T 3tum_A 200 GTRAELPLSAALLATLQPDTLVADVV 225 (269)
T ss_dssp STTCCCSSCHHHHHTCCTTSEEEECC
T ss_pred CCCCCCCCChHHHhccCCCcEEEEEc
Confidence 111 124445556666666555543
No 273
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=97.74 E-value=0.00011 Score=69.85 Aligned_cols=135 Identities=13% Similarity=0.132 Sum_probs=90.7
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh---------------c-------CceecCCHHhhcCCC
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE---------------T-------GAKFEEDLDTMLPKC 93 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~---------------~-------g~~~~~~l~ell~~a 93 (221)
=++|||||.|.||..+|..+...|++|+.+|+++...+.... . .+....+++ .+++|
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~a 394 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTK-ELSTV 394 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGG-GGGSC
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHH-HHhhC
Confidence 369999999999999999999999999999987532211100 0 012333444 47899
Q ss_pred CEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCCCCeE
Q 027577 94 DIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQA 173 (221)
Q Consensus 94 DvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~~~~~~l~~~~n~~ 173 (221)
|+|+=++|-+.+.+.-+-++.-+.++++++|-.-+.+ +....|.+.++ ..=+.+++--|. |.+ .-||.+ |+
T Consensus 395 DlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSs--l~i~~ia~~~~-~p~r~ig~HFfn--P~~-~m~LVE---vi 465 (742)
T 3zwc_A 395 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA--LNVDDIASSTD-RPQLVIGTHFFS--PAH-VMRLLE---VI 465 (742)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHTTSS-CGGGEEEEECCS--STT-TCCEEE---EE
T ss_pred CEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCc--CChHHHHhhcC-CccccccccccC--CCC-CCceEE---Ee
Confidence 9999999977777776666777778999998765544 55566766654 333445666553 322 223443 66
Q ss_pred ECCCCCc
Q 027577 174 MTPHVSG 180 (221)
Q Consensus 174 ~tPH~a~ 180 (221)
-+|+++-
T Consensus 466 ~g~~Ts~ 472 (742)
T 3zwc_A 466 PSRYSSP 472 (742)
T ss_dssp ECSSCCH
T ss_pred cCCCCCH
Confidence 6666553
No 274
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=97.73 E-value=0.00031 Score=60.31 Aligned_cols=96 Identities=11% Similarity=0.123 Sum_probs=70.2
Q ss_pred CCCCCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCCCh--hHH-------HhcC--ceecCCHHhhcCCCCEEEEeC
Q 027577 33 DLEGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDP--QLE-------KETG--AKFEEDLDTMLPKCDIVVVNT 100 (221)
Q Consensus 33 ~l~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~--~~~-------~~~g--~~~~~~l~ell~~aDvVv~~~ 100 (221)
.+.|.||++|| .+++.++++..+..+|++|.+..|....+ +.. +..| +....+++++++++|+|....
T Consensus 154 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvvyt~~ 233 (323)
T 3gd5_A 154 RLAGLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTDV 233 (323)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEEec
Confidence 48899999999 68999999999999999999998764222 111 1234 556689999999999998754
Q ss_pred CCCh----------h--hhhcchHHHHhcCCCCCEEEEcC
Q 027577 101 PLTE----------K--TRGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 101 p~~~----------~--t~~~i~~~~~~~mk~ga~lIn~s 128 (221)
=... + ...-++.+.++.+|++++|+.+.
T Consensus 234 wqs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHcl 273 (323)
T 3gd5_A 234 WTSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHCL 273 (323)
T ss_dssp CC---------CCHHHHTTCCBCHHHHHTSCTTCEEEECS
T ss_pred eecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECCC
Confidence 2111 0 11246788888888888888764
No 275
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.73 E-value=3.4e-05 Score=62.66 Aligned_cols=66 Identities=17% Similarity=0.180 Sum_probs=44.1
Q ss_pred CCEEEEEccCHHHHHHHHH--HccCCCeEE-EEcCCCCChhH-HHhcCceecCCHHhhcCCCCEEEEeCC
Q 027577 36 GKTVGTVGCGRIGKLLLQR--LKPFNCNLL-YHDRVKMDPQL-EKETGAKFEEDLDTMLPKCDIVVVNTP 101 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~--l~~~G~~V~-~~d~~~~~~~~-~~~~g~~~~~~l~ell~~aDvVv~~~p 101 (221)
.++|+|||+|++|+.+++. ....|+++. ++|.++..... ....++...+++++++++.|++++++|
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvP 154 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVP 154 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSC
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecC
Confidence 4679999999999999994 345678754 67876543321 222334456789999977799999999
No 276
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.69 E-value=3.1e-05 Score=67.13 Aligned_cols=66 Identities=23% Similarity=0.234 Sum_probs=48.0
Q ss_pred CEEEEEccCHHHHHHHHHHccC--------CCeE-EEEcCCCCCh-hHHHhcCc-eecCCHHhhcC--CCCEEEEeCCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF--------NCNL-LYHDRVKMDP-QLEKETGA-KFEEDLDTMLP--KCDIVVVNTPL 102 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~--------G~~V-~~~d~~~~~~-~~~~~~g~-~~~~~l~ell~--~aDvVv~~~p~ 102 (221)
-+|||||+|.||+..++.++.. +.+| .++|+++... ..+++.|+ ..+.+++++++ +.|+|++++|.
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP~ 85 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTPG 85 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSCG
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCCh
Confidence 4899999999999988877543 2354 4678765332 34455676 45679999995 48999999993
No 277
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=97.69 E-value=0.00038 Score=59.83 Aligned_cols=96 Identities=16% Similarity=0.206 Sum_probs=71.1
Q ss_pred CCCCCEEEEEccC--HHHHHHHHHHccCCCeEEEEcCCCC-Ch-hH---H----HhcC--ceecCCHHhhcCCCCEEEEe
Q 027577 33 DLEGKTVGTVGCG--RIGKLLLQRLKPFNCNLLYHDRVKM-DP-QL---E----KETG--AKFEEDLDTMLPKCDIVVVN 99 (221)
Q Consensus 33 ~l~g~~vgIIG~G--~iG~~iA~~l~~~G~~V~~~d~~~~-~~-~~---~----~~~g--~~~~~~l~ell~~aDvVv~~ 99 (221)
.+.|.||++||=| ++.++++..+..+|++|.+..|... .. +. + ++.| +....+++++++++|+|...
T Consensus 164 ~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~ 243 (325)
T 1vlv_A 164 RLKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTD 243 (325)
T ss_dssp CSTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEec
Confidence 5889999999974 9999999999999999999988542 11 12 1 1445 45578999999999999884
Q ss_pred CCC-------Chh-----hhhcchHHHHhcC-CCCCEEEEcC
Q 027577 100 TPL-------TEK-----TRGMFDKDRIAKM-KKGVLIVNNA 128 (221)
Q Consensus 100 ~p~-------~~~-----t~~~i~~~~~~~m-k~ga~lIn~s 128 (221)
.=. .++ ...-++.+.++.+ |++++|+.+.
T Consensus 244 ~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~L 285 (325)
T 1vlv_A 244 VWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHCL 285 (325)
T ss_dssp CCC----------CHHHHGGGCBCHHHHHTTCCTTCEEEECS
T ss_pred cccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEEECCC
Confidence 321 011 1234678888888 8888888875
No 278
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.69 E-value=0.00012 Score=62.77 Aligned_cols=60 Identities=23% Similarity=0.300 Sum_probs=47.6
Q ss_pred CCEEEEEccCHHHH-HHHHHHccC-CCeEE-EEcCCCCChhHHHhcCceecCCHHhhcCC---CCEEEEeCC
Q 027577 36 GKTVGTVGCGRIGK-LLLQRLKPF-NCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLPK---CDIVVVNTP 101 (221)
Q Consensus 36 g~~vgIIG~G~iG~-~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~g~~~~~~l~ell~~---aDvVv~~~p 101 (221)
-.+|||||+|.||+ ..++.++.. +++|. ++|++.. ..++..+.++++++++ .|+|++++|
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~------~~g~~~~~~~~~ll~~~~~vD~V~i~tp 90 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGT------VEGVNSYTTIEAMLDAEPSIDAVSLCMP 90 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCC------CTTSEEESSHHHHHHHCTTCCEEEECSC
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChh------hcCCCccCCHHHHHhCCCCCCEEEEeCC
Confidence 46899999999998 788888765 67754 5677643 2467777899999854 999999999
No 279
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=97.69 E-value=0.0002 Score=64.02 Aligned_cols=110 Identities=15% Similarity=0.225 Sum_probs=72.9
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEc--------CCCCChhH------------------HHhcCceecC
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHD--------RVKMDPQL------------------EKETGAKFEE 84 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d--------~~~~~~~~------------------~~~~g~~~~~ 84 (221)
+.+|.|+||.|-|+|++|..+|+.|...|.+|++.+ +.....+. ....+...++
T Consensus 230 ~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~~ 309 (450)
T 4fcc_A 230 GMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYLE 309 (450)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEEE
T ss_pred CCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEec
Confidence 346899999999999999999999999999987644 32222211 1122444332
Q ss_pred CHHhhc-CCCCEEEEeCCCChhhhhcchHHHHhcCCCC--CEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 85 DLDTML-PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKG--VLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 85 ~l~ell-~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~g--a~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
.++++ .+|||.+-|.- .+.|+.+....++.+ .++++.+-+.+ ..++ .+.|.+..|.
T Consensus 310 -~~~i~~~~~DI~iPcAl-----~~~I~~~~a~~L~a~g~k~IaEgAN~p~-t~eA-~~iL~~rGIl 368 (450)
T 4fcc_A 310 -GQQPWSVPVDIALPCAT-----QNELDVDAAHQLIANGVKAVAEGANMPT-TIEA-TELFQQAGVL 368 (450)
T ss_dssp -TCCGGGSCCSEEEECSC-----TTCBCHHHHHHHHHTTCCEEECCSSSCB-CHHH-HHHHHHTTCE
T ss_pred -CcccccCCccEEeeccc-----cccccHHHHHHHHhcCceEEecCCCCCC-CHHH-HHHHHHCCCE
Confidence 23333 47999988764 466887777777643 46777776664 4444 3567776666
No 280
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=97.68 E-value=5.5e-05 Score=65.75 Aligned_cols=91 Identities=15% Similarity=0.157 Sum_probs=67.7
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHH-hcCceec---CC---HHhhcCCCCEEEEeCCCChhhh
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-ETGAKFE---ED---LDTMLPKCDIVVVNTPLTEKTR 107 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~~---~~---l~ell~~aDvVv~~~p~~~~t~ 107 (221)
.|++|.|+|.|.||...++.++.+|++|++.++++...+.+. ++|...+ .+ +.++...+|+|+-++.....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~~-- 264 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHP-- 264 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHHH--
Confidence 689999999999999999999999999999998765555544 6675422 22 23344568999998873221
Q ss_pred hcchHHHHhcCCCCCEEEEcCCC
Q 027577 108 GMFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn~srg 130 (221)
....+..|+++..+|+++..
T Consensus 265 ---~~~~~~~l~~~G~iv~~g~~ 284 (366)
T 1yqd_A 265 ---LLPLFGLLKSHGKLILVGAP 284 (366)
T ss_dssp ---SHHHHHHEEEEEEEEECCCC
T ss_pred ---HHHHHHHHhcCCEEEEEccC
Confidence 24566778899999998753
No 281
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.67 E-value=3.8e-05 Score=68.13 Aligned_cols=68 Identities=21% Similarity=0.255 Sum_probs=50.6
Q ss_pred CCEEEEEccCH---HHHHHHHHHccCC-CeEE--EEcCCCCCh-hHHHhcCc---eecCCHHhhcCC-------CCEEEE
Q 027577 36 GKTVGTVGCGR---IGKLLLQRLKPFN-CNLL--YHDRVKMDP-QLEKETGA---KFEEDLDTMLPK-------CDIVVV 98 (221)
Q Consensus 36 g~~vgIIG~G~---iG~~iA~~l~~~G-~~V~--~~d~~~~~~-~~~~~~g~---~~~~~l~ell~~-------aDvVv~ 98 (221)
-.+|||||+|. ||+..+..++..+ +++. ++|+++... +.+++.|+ ..+.++++++++ .|+|++
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I 116 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVAI 116 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEEE
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEEE
Confidence 35899999999 9999988887665 6765 568765332 34455677 467899999865 999999
Q ss_pred eCCCC
Q 027577 99 NTPLT 103 (221)
Q Consensus 99 ~~p~~ 103 (221)
++|..
T Consensus 117 ~tp~~ 121 (417)
T 3v5n_A 117 VTPNH 121 (417)
T ss_dssp CSCTT
T ss_pred CCCcH
Confidence 99943
No 282
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.67 E-value=2.3e-05 Score=69.01 Aligned_cols=67 Identities=21% Similarity=0.183 Sum_probs=51.3
Q ss_pred CCEEEEEccCH---HHHHHHHHHccCC-CeEE--EEcCCCCCh-hHHHhcCc---eecCCHHhhcCC-------CCEEEE
Q 027577 36 GKTVGTVGCGR---IGKLLLQRLKPFN-CNLL--YHDRVKMDP-QLEKETGA---KFEEDLDTMLPK-------CDIVVV 98 (221)
Q Consensus 36 g~~vgIIG~G~---iG~~iA~~l~~~G-~~V~--~~d~~~~~~-~~~~~~g~---~~~~~l~ell~~-------aDvVv~ 98 (221)
-.+|||||+|. ||+..+..++..+ +++. ++|+++... +.+++.|+ ..+.++++++++ .|+|++
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~i 91 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVSI 91 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEEE
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEEE
Confidence 46899999999 9999998887654 6765 468765333 34456777 567899999864 999999
Q ss_pred eCCC
Q 027577 99 NTPL 102 (221)
Q Consensus 99 ~~p~ 102 (221)
|+|.
T Consensus 92 ~tp~ 95 (398)
T 3dty_A 92 ATPN 95 (398)
T ss_dssp ESCG
T ss_pred CCCc
Confidence 9994
No 283
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=97.66 E-value=0.00025 Score=60.30 Aligned_cols=96 Identities=20% Similarity=0.197 Sum_probs=71.7
Q ss_pred CCCCCEEEEEcc---CHHHHHHHHHHccC-CCeEEEEcCCCC--ChhHHHhcCc--eecCCHHhhcCCCCEEEEeCCCCh
Q 027577 33 DLEGKTVGTVGC---GRIGKLLLQRLKPF-NCNLLYHDRVKM--DPQLEKETGA--KFEEDLDTMLPKCDIVVVNTPLTE 104 (221)
Q Consensus 33 ~l~g~~vgIIG~---G~iG~~iA~~l~~~-G~~V~~~d~~~~--~~~~~~~~g~--~~~~~l~ell~~aDvVv~~~p~~~ 104 (221)
.+.|.||++||= +++.++++..+..+ |++|.+..|... +.+..++.|. ....+++++++++|+|....=..+
T Consensus 146 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~e 225 (299)
T 1pg5_A 146 TIDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKE 225 (299)
T ss_dssp CSTTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCST
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCcccc
Confidence 588999999996 69999999999999 999999988542 2222334453 345789999999999988654331
Q ss_pred ------hh-----hhcchHHHHhcCCCCCEEEEcC
Q 027577 105 ------KT-----RGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 105 ------~t-----~~~i~~~~~~~mk~ga~lIn~s 128 (221)
+. ..-++.+.++.+|++++|+.+.
T Consensus 226 r~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~l 260 (299)
T 1pg5_A 226 RFVDEMEYEKIKGSYIVSLDLANKMKKDSIILHPL 260 (299)
T ss_dssp TSSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECCS
T ss_pred cccCHHHHHHhhcCcccCHHHHHhcCCCCEEECCC
Confidence 11 2346778888888888888763
No 284
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=97.65 E-value=0.0004 Score=59.28 Aligned_cols=96 Identities=14% Similarity=0.094 Sum_probs=70.6
Q ss_pred CCC-CCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCC-Ch-hHH---H----hcC--ceecCCHHhhcCCCCEEEEe
Q 027577 33 DLE-GKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKM-DP-QLE---K----ETG--AKFEEDLDTMLPKCDIVVVN 99 (221)
Q Consensus 33 ~l~-g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~-~~-~~~---~----~~g--~~~~~~l~ell~~aDvVv~~ 99 (221)
.+. |.||++|| .+++.++++..+..+|++|.+..|... .. +.. + ..| +....+++++++++|+|..-
T Consensus 142 ~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~ 221 (307)
T 3tpf_A 142 MQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVITD 221 (307)
T ss_dssp CGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEEC
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEec
Confidence 578 99999999 678999999999999999999988642 22 221 1 333 44567999999999999876
Q ss_pred C---CCCh-h--------hhhcchHHHHhcCCCCCEEEEcC
Q 027577 100 T---PLTE-K--------TRGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 100 ~---p~~~-~--------t~~~i~~~~~~~mk~ga~lIn~s 128 (221)
. -..+ + ...-++.+.++.+|++++|+.+.
T Consensus 222 ~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~l 262 (307)
T 3tpf_A 222 TWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCL 262 (307)
T ss_dssp CSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEECS
T ss_pred CcccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECCC
Confidence 5 1110 0 12346788888888888888875
No 285
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=97.65 E-value=0.00025 Score=60.97 Aligned_cols=99 Identities=16% Similarity=0.181 Sum_probs=63.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChh----HHHh------cC--ceecCCHHhhcCCCCEEEEeCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQ----LEKE------TG--AKFEEDLDTMLPKCDIVVVNTP 101 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~----~~~~------~g--~~~~~~l~ell~~aDvVv~~~p 101 (221)
..++|+|||.|.||.++|..+...|+ +|..+|+++...+ .... .. +....+ .+.+++||+|+++.+
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d-~~a~~~aDvVIi~ag 82 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTND-YKDLENSDVVIVTAG 82 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC-GGGGTTCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCC-HHHHCCCCEEEEcCC
Confidence 35799999999999999999987777 9999998764322 0111 11 222234 478899999999975
Q ss_pred CC--hh---------hhhcchH--HHHhcCCCCCEEEEcCCCCccCHH
Q 027577 102 LT--EK---------TRGMFDK--DRIAKMKKGVLIVNNARGAIMDTQ 136 (221)
Q Consensus 102 ~~--~~---------t~~~i~~--~~~~~mk~ga~lIn~srg~~vd~~ 136 (221)
.. +. +..++.. +.+....|++++++++ .++|.-
T Consensus 83 ~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt--NPvd~~ 128 (321)
T 3p7m_A 83 VPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT--NPLDIM 128 (321)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHHHH
T ss_pred cCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec--CchHHH
Confidence 22 11 1111110 1233345889999995 555543
No 286
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=97.63 E-value=0.00015 Score=62.42 Aligned_cols=100 Identities=18% Similarity=0.150 Sum_probs=63.4
Q ss_pred CCCCEEEEEccCHHHHHHHHHHccCCC--eEEEEcCCCCChh-----HHHh----cCceecCCHHhhcCCCCEEEEeCCC
Q 027577 34 LEGKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ-----LEKE----TGAKFEEDLDTMLPKCDIVVVNTPL 102 (221)
Q Consensus 34 l~g~~vgIIG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~-----~~~~----~g~~~~~~l~ell~~aDvVv~~~p~ 102 (221)
-.+++|+|||.|.||.++|..+...|. ++..+|.+....+ .... ..+....+..+.+++||+|+++...
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~ 86 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGA 86 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCC
Confidence 457899999999999999999987776 8999998542211 1010 1222233446778999999998753
Q ss_pred Chh-----------hhhcchH--HHHhcCCCCCEEEEcCCCCccCH
Q 027577 103 TEK-----------TRGMFDK--DRIAKMKKGVLIVNNARGAIMDT 135 (221)
Q Consensus 103 ~~~-----------t~~~i~~--~~~~~mk~ga~lIn~srg~~vd~ 135 (221)
... +..++.. +.+....|++++++++ .++|.
T Consensus 87 ~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt--NPvdi 130 (326)
T 3vku_A 87 PQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA--NPVDI 130 (326)
T ss_dssp C----------------CHHHHHHHHHTTTCCSEEEECS--SSHHH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc--CchHH
Confidence 211 1111111 2344456899999996 45553
No 287
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.63 E-value=3.6e-05 Score=68.76 Aligned_cols=66 Identities=14% Similarity=0.091 Sum_probs=51.0
Q ss_pred CCEEEEEcc----CHHHHHHHHHHccC--CCeE-EEEcCCCCChh-HHHhcCce---ecCCHHhhcC--CCCEEEEeCC
Q 027577 36 GKTVGTVGC----GRIGKLLLQRLKPF--NCNL-LYHDRVKMDPQ-LEKETGAK---FEEDLDTMLP--KCDIVVVNTP 101 (221)
Q Consensus 36 g~~vgIIG~----G~iG~~iA~~l~~~--G~~V-~~~d~~~~~~~-~~~~~g~~---~~~~l~ell~--~aDvVv~~~p 101 (221)
-.+|||||+ |.||+.+++.++.. +++| .++|+++...+ .++..|+. .+.+++++++ +.|+|++|+|
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp 98 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQ 98 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSC
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCC
Confidence 358999999 99999999999876 6775 56787653332 34445654 6689999985 6999999999
No 288
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=97.62 E-value=0.00021 Score=61.19 Aligned_cols=112 Identities=16% Similarity=0.179 Sum_probs=65.2
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCC--eEEEEcCCCCChh-HHHhc--------CceecCCHHhhcCCCCEEEEeCCCCh
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ-LEKET--------GAKFEEDLDTMLPKCDIVVVNTPLTE 104 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~-~~~~~--------g~~~~~~l~ell~~aDvVv~~~p~~~ 104 (221)
.+||+|||.|.+|.+++..+...|. +|.++|.+....+ ...++ .+....+..+.+++||+|+++.+...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p~ 86 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGANR 86 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 4689999999999999999988887 8999998753322 11111 11111223567899999999987422
Q ss_pred hhhhc------------ch--HHHHhcCCCCCEEEEcCCCCccCHHH--HHHH--HHhCCceEE
Q 027577 105 KTRGM------------FD--KDRIAKMKKGVLIVNNARGAIMDTQA--VVDA--CSSGHIAGY 150 (221)
Q Consensus 105 ~t~~~------------i~--~~~~~~mk~ga~lIn~srg~~vd~~a--l~~a--l~~g~i~~a 150 (221)
..+. +. .+.+....|+++++++ ..++|.-. +.+. +...++.|.
T Consensus 87 -k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~--tNPv~~~~~~~~k~s~~p~~rviG~ 147 (318)
T 1y6j_A 87 -KPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV--SNPVDIITYMIQKWSGLPVGKVIGS 147 (318)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC--SSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred -CCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe--cCcHHHHHHHHHHHcCCCHHHEecc
Confidence 1111 10 0122333689999996 44555433 2232 233466655
No 289
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.62 E-value=0.00012 Score=61.93 Aligned_cols=102 Identities=18% Similarity=0.223 Sum_probs=64.6
Q ss_pred CEEEEEccCHHHHHHHHHHcc----CCCeEE-EEcCCCCChhHHHhcCceecCCHHhhcC--CCCEEEEeCCCChhhhhc
Q 027577 37 KTVGTVGCGRIGKLLLQRLKP----FNCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGM 109 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~----~G~~V~-~~d~~~~~~~~~~~~g~~~~~~l~ell~--~aDvVv~~~p~~~~t~~~ 109 (221)
.+|||||+|.||+..++.+.. -++++. ++|++.. ++..++. ..+++++++ +.|+|++++|.. .+.
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~----a~~~g~~-~~~~~ell~~~~vD~V~i~tp~~--~H~- 79 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRREL----GSLDEVR-QISLEDALRSQEIDVAYICSESS--SHE- 79 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCC----CEETTEE-BCCHHHHHHCSSEEEEEECSCGG--GHH-
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHH----HHHcCCC-CCCHHHHhcCCCCCEEEEeCCcH--hHH-
Confidence 489999999999999998865 356655 5676432 2234555 368999986 689999999932 222
Q ss_pred chHHHHhcCCCCC-EEEEc-CCCCccCHHHHHHHHHhCCce
Q 027577 110 FDKDRIAKMKKGV-LIVNN-ARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 110 i~~~~~~~mk~ga-~lIn~-srg~~vd~~al~~al~~g~i~ 148 (221)
+.....++.|. +++.- ..-.+-+.++|.++.++.++.
T Consensus 80 --~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~ 118 (294)
T 1lc0_A 80 --DYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRV 118 (294)
T ss_dssp --HHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCC
T ss_pred --HHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCE
Confidence 22334455565 44442 112233446677777665554
No 290
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=97.61 E-value=8.6e-05 Score=64.67 Aligned_cols=91 Identities=16% Similarity=0.230 Sum_probs=68.8
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec---CC---HHhhcCCCCEEEEeCCCChhhhh
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE---ED---LDTMLPKCDIVVVNTPLTEKTRG 108 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~---~~---l~ell~~aDvVv~~~p~~~~t~~ 108 (221)
.|.+|.|+|.|.+|...++.++.+|++|++.++++...+.++++|...+ .+ .+++...+|+|+-++....
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~---- 269 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPH---- 269 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCC----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHH----
Confidence 4889999999999999999999999999999987766777777776432 12 2233356899998886321
Q ss_pred cchHHHHhcCCCCCEEEEcCCC
Q 027577 109 MFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 109 ~i~~~~~~~mk~ga~lIn~srg 130 (221)
.-...++.++++..++.++..
T Consensus 270 -~~~~~~~~l~~~G~iv~~G~~ 290 (369)
T 1uuf_A 270 -NLDDFTTLLKRDGTMTLVGAP 290 (369)
T ss_dssp -CHHHHHTTEEEEEEEEECCCC
T ss_pred -HHHHHHHHhccCCEEEEeccC
Confidence 224567888999999988753
No 291
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=97.60 E-value=0.00043 Score=59.84 Aligned_cols=95 Identities=12% Similarity=0.092 Sum_probs=66.6
Q ss_pred CCCCCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCCC-hh-H-------HHhcC--ceecCCHHhhcCCCCEEEEeC
Q 027577 33 DLEGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMD-PQ-L-------EKETG--AKFEEDLDTMLPKCDIVVVNT 100 (221)
Q Consensus 33 ~l~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~-~-------~~~~g--~~~~~~l~ell~~aDvVv~~~ 100 (221)
.+.|.||++|| .+++.++++..+..+|++|.+..|.... .+ . ++..| +....+++ +++++|+|..-+
T Consensus 172 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~-av~~aDvvytd~ 250 (339)
T 4a8t_A 172 KLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDV 250 (339)
T ss_dssp CGGGCEEEEESSCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECCGG-GGTTCSEEEECC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECChh-HHcCCCEEEecC
Confidence 58899999999 6899999999999999999999886422 21 1 12335 44567899 999999998633
Q ss_pred --C--CCh----h----h--hhcchHHHHhcCCCCCEEEEcC
Q 027577 101 --P--LTE----K----T--RGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 101 --p--~~~----~----t--~~~i~~~~~~~mk~ga~lIn~s 128 (221)
+ ..+ + . ..-++.+.++.+|++++|+.+.
T Consensus 251 w~smg~~~~~~~er~~~~~~~y~vt~ell~~ak~dai~mHcL 292 (339)
T 4a8t_A 251 WYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCL 292 (339)
T ss_dssp SSCCTTSCCCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECS
T ss_pred cccCCchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCC
Confidence 1 001 1 1 1335666777777777777654
No 292
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=97.59 E-value=0.00019 Score=61.51 Aligned_cols=99 Identities=16% Similarity=0.164 Sum_probs=62.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCC--eEEEEcCCCCChhH-----HHh-----cCceecCCHHhhcCCCCEEEEeCCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQL-----EKE-----TGAKFEEDLDTMLPKCDIVVVNTPL 102 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~-----~~~-----~g~~~~~~l~ell~~aDvVv~~~p~ 102 (221)
..+||+|||.|.+|.+++..+...|. +|..+|.++...+. ... ..+....+..+.+++||+|+++.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag~ 84 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGA 84 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCCC
Confidence 35799999999999999999876664 89999986421111 110 1112222446779999999999864
Q ss_pred Chhh-----------hhcch--HHHHhcCCCCCEEEEcCCCCccCH
Q 027577 103 TEKT-----------RGMFD--KDRIAKMKKGVLIVNNARGAIMDT 135 (221)
Q Consensus 103 ~~~t-----------~~~i~--~~~~~~mk~ga~lIn~srg~~vd~ 135 (221)
.... ..++. .+.+....|++++++++ .++|.
T Consensus 85 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t--NPv~~ 128 (317)
T 3d0o_A 85 AQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT--NPVDI 128 (317)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS--SSHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec--CcHHH
Confidence 3211 01111 01233347899999975 55554
No 293
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.59 E-value=9.6e-05 Score=63.26 Aligned_cols=87 Identities=14% Similarity=0.154 Sum_probs=56.6
Q ss_pred CEEEEEccCHHHHHHHHHHcc--CCCeE-EEEcCCCCC--hhHHHhcCcee-cCCHHhhcC-----CCCEEEEeCCCChh
Q 027577 37 KTVGTVGCGRIGKLLLQRLKP--FNCNL-LYHDRVKMD--PQLEKETGAKF-EEDLDTMLP-----KCDIVVVNTPLTEK 105 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~--~G~~V-~~~d~~~~~--~~~~~~~g~~~-~~~l~ell~-----~aDvVv~~~p~~~~ 105 (221)
.+|||||+|.||+.+++.+.. -+.++ .++|+++.. .+.++..|+.. ..+.+++++ +.|+|+.++| ..
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp--~~ 82 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATS--AS 82 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSC--HH
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCC--hH
Confidence 589999999999999999844 45664 567877655 34455667652 356677754 5899999999 22
Q ss_pred hhhcchHHHHhcCCCCCEEEE
Q 027577 106 TRGMFDKDRIAKMKKGVLIVN 126 (221)
Q Consensus 106 t~~~i~~~~~~~mk~ga~lIn 126 (221)
...-+....++ .++|..+++
T Consensus 83 ~h~~~a~~al~-a~~Gk~Vi~ 102 (312)
T 1nvm_B 83 AHVQNEALLRQ-AKPGIRLID 102 (312)
T ss_dssp HHHHHHHHHHH-HCTTCEEEE
T ss_pred HHHHHHHHHHH-hCCCCEEEE
Confidence 22222222222 123777777
No 294
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.59 E-value=0.00012 Score=63.05 Aligned_cols=67 Identities=28% Similarity=0.335 Sum_probs=46.9
Q ss_pred CEEEEEccCHHHHHHHHHHccC-CCeEE-EEcCCCCChh-HHHhcCc------------------eecCCHHhhcCCCCE
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQ-LEKETGA------------------KFEEDLDTMLPKCDI 95 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~-G~~V~-~~d~~~~~~~-~~~~~g~------------------~~~~~l~ell~~aDv 95 (221)
.+|||+|+|.||+.+++.+... ++++. +.|+++.... .++..|+ ....++++++.++|+
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vDv 82 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI 82 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCCE
Confidence 3899999999999999999765 46754 4566433222 2222222 233578888889999
Q ss_pred EEEeCCCC
Q 027577 96 VVVNTPLT 103 (221)
Q Consensus 96 Vv~~~p~~ 103 (221)
|+.|+|..
T Consensus 83 V~~aTp~~ 90 (334)
T 2czc_A 83 IVDATPGG 90 (334)
T ss_dssp EEECCSTT
T ss_pred EEECCCcc
Confidence 99999943
No 295
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.59 E-value=7.3e-05 Score=64.96 Aligned_cols=66 Identities=12% Similarity=0.109 Sum_probs=49.5
Q ss_pred CCEEEEEccCHHHH-HHHHHHccCCCeEE-EEcCCCCCh-hHHHhcC-ceecCCHHhhcCC--CCEEEEeCC
Q 027577 36 GKTVGTVGCGRIGK-LLLQRLKPFNCNLL-YHDRVKMDP-QLEKETG-AKFEEDLDTMLPK--CDIVVVNTP 101 (221)
Q Consensus 36 g~~vgIIG~G~iG~-~iA~~l~~~G~~V~-~~d~~~~~~-~~~~~~g-~~~~~~l~ell~~--aDvVv~~~p 101 (221)
-.+|||||+|.+|. .++..+..-++++. ++|+++... +.++..+ ...+.++++++++ .|+|++++|
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp 97 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAV 97 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCC
T ss_pred CcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 45899999999995 56777777788854 678765333 2344555 4567899999975 899999999
No 296
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=97.59 E-value=0.00033 Score=60.49 Aligned_cols=97 Identities=12% Similarity=0.105 Sum_probs=71.9
Q ss_pred CCCCCEEEEEccC--HHHHHHHHHHccCCCeEEEEcCCCC-Ch-hH---HH----hcC--ceecCCHHhhcCCCCEEEEe
Q 027577 33 DLEGKTVGTVGCG--RIGKLLLQRLKPFNCNLLYHDRVKM-DP-QL---EK----ETG--AKFEEDLDTMLPKCDIVVVN 99 (221)
Q Consensus 33 ~l~g~~vgIIG~G--~iG~~iA~~l~~~G~~V~~~d~~~~-~~-~~---~~----~~g--~~~~~~l~ell~~aDvVv~~ 99 (221)
.+.|.+|++||=| +++++++..+..+|++|.+..|... .. +. ++ +.| +....+++++++++|+|..-
T Consensus 152 ~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd 231 (335)
T 1dxh_A 152 PLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTD 231 (335)
T ss_dssp CGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEEC
T ss_pred CcCCeEEEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEeC
Confidence 5889999999975 9999999999999999999988642 11 12 11 445 45578999999999999884
Q ss_pred CCC--------Chh-----hhhcchHHHHhcC-CCCCEEEEcCC
Q 027577 100 TPL--------TEK-----TRGMFDKDRIAKM-KKGVLIVNNAR 129 (221)
Q Consensus 100 ~p~--------~~~-----t~~~i~~~~~~~m-k~ga~lIn~sr 129 (221)
.=. .++ ...-++.+.++.. +++++|+.+.-
T Consensus 232 ~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcLP 275 (335)
T 1dxh_A 232 VWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCLP 275 (335)
T ss_dssp CCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEECSC
T ss_pred CccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECCCC
Confidence 321 011 1234688888888 88999988743
No 297
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=97.57 E-value=9.4e-05 Score=64.03 Aligned_cols=92 Identities=24% Similarity=0.174 Sum_probs=68.8
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecC------CHHhhc-CCCCEEEEeCCCC-hhh
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEE------DLDTML-PKCDIVVVNTPLT-EKT 106 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~------~l~ell-~~aDvVv~~~p~~-~~t 106 (221)
.|++|.|+|.|.+|...++.++.+|++|++.++++...+.++++|...+- ++.+.+ ...|+|+-+++.+ +.
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~~~- 257 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDI- 257 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCSTTC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCcHH-
Confidence 48999999999999999999999999999999887777777778764321 232223 4689999998742 11
Q ss_pred hhcchHHHHhcCCCCCEEEEcCCC
Q 027577 107 RGMFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 107 ~~~i~~~~~~~mk~ga~lIn~srg 130 (221)
.-...++.++++..++.++..
T Consensus 258 ---~~~~~~~~l~~~G~iv~~g~~ 278 (360)
T 1piw_A 258 ---DFNIMPKAMKVGGRIVSISIP 278 (360)
T ss_dssp ---CTTTGGGGEEEEEEEEECCCC
T ss_pred ---HHHHHHHHhcCCCEEEEecCC
Confidence 123456778888899888653
No 298
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=97.57 E-value=7.8e-05 Score=64.70 Aligned_cols=93 Identities=17% Similarity=0.210 Sum_probs=68.2
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCC---CChhHHHhcCceecC--CHHhhc----CCCCEEEEeCCCC
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVK---MDPQLEKETGAKFEE--DLDTML----PKCDIVVVNTPLT 103 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~---~~~~~~~~~g~~~~~--~l~ell----~~aDvVv~~~p~~ 103 (221)
.+.|++|.|+|.|.||..+++.++.+|++|++.+++. ...+.++++|+..++ ++.+.+ ...|+|+.++...
T Consensus 178 ~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 257 (366)
T 2cdc_A 178 TLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGAD 257 (366)
T ss_dssp SSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCCh
Confidence 5679999999999999999999999999999999876 455666667765441 111111 3589999988732
Q ss_pred hhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 104 EKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
... ....+..|+++..+|+++-
T Consensus 258 ~~~----~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 258 VNI----LGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp THH----HHHHGGGEEEEEEEEECSC
T ss_pred HHH----HHHHHHHHhcCCEEEEEec
Confidence 221 0456778889889998874
No 299
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=97.57 E-value=0.00024 Score=61.69 Aligned_cols=90 Identities=17% Similarity=0.118 Sum_probs=67.7
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhcCceec-------CCHHhhcC-----CCCEEEEeCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-------EDLDTMLP-----KCDIVVVNTP 101 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~ell~-----~aDvVv~~~p 101 (221)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++...+.++++|+..+ .++.+.+. ..|+|+-++.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 271 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 271 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCC
Confidence 58899999999999999999999999 79999987777777777776432 12333222 4899998886
Q ss_pred CChhhhhcchHHHHhcCCCC-CEEEEcCC
Q 027577 102 LTEKTRGMFDKDRIAKMKKG-VLIVNNAR 129 (221)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~g-a~lIn~sr 129 (221)
..+ .-...+..++++ ..++.++-
T Consensus 272 ~~~-----~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 272 NVG-----VMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp CHH-----HHHHHHHTBCTTTCEEEECSC
T ss_pred CHH-----HHHHHHHHhhcCCcEEEEEcC
Confidence 311 124567888998 88888864
No 300
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=97.56 E-value=0.0003 Score=60.04 Aligned_cols=108 Identities=16% Similarity=0.123 Sum_probs=74.2
Q ss_pred CCCCCEEEEE-cc-CHHHHHHHHHHccCCCeEE-EEcCCCCChhHHHhcCceecCCHHhhcC--CCCEEEEeCCCChhhh
Q 027577 33 DLEGKTVGTV-GC-GRIGKLLLQRLKPFNCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPLTEKTR 107 (221)
Q Consensus 33 ~l~g~~vgII-G~-G~iG~~iA~~l~~~G~~V~-~~d~~~~~~~~~~~~g~~~~~~l~ell~--~aDvVv~~~p~~~~t~ 107 (221)
-+..++++|| |+ |++|+.+++.++..|++++ .+++.....+ ..|+..+.+++++.+ ..|++++++|. +...
T Consensus 10 l~~~~siaVV~Gasg~~G~~~~~~l~~~G~~~v~~VnP~~~g~~---i~G~~vy~sl~el~~~~~vD~avI~vP~-~~~~ 85 (305)
T 2fp4_A 10 YVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKT---HLGLPVFNTVKEAKEQTGATASVIYVPP-PFAA 85 (305)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCE---ETTEEEESSHHHHHHHHCCCEEEECCCH-HHHH
T ss_pred HhCCCcEEEEECCCCCHHHHHHHHHHHCCCcEEEEeCCCcCcce---ECCeeeechHHHhhhcCCCCEEEEecCH-HHHH
Confidence 4667889999 98 9999999999999999943 5565421111 357777788999988 89999999992 2223
Q ss_pred hcchHHHHhcCCCC-CEEEEcCCCCc-cCHHHHHHHHHhC-Cce
Q 027577 108 GMFDKDRIAKMKKG-VLIVNNARGAI-MDTQAVVDACSSG-HIA 148 (221)
Q Consensus 108 ~~i~~~~~~~mk~g-a~lIn~srg~~-vd~~al~~al~~g-~i~ 148 (221)
..+. +..+ .| ..+|+.+-|-. -++..+.+..++. .+.
T Consensus 86 ~~~~-e~i~---~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~ 125 (305)
T 2fp4_A 86 AAIN-EAID---AEVPLVVCITEGIPQQDMVRVKHRLLRQGKTR 125 (305)
T ss_dssp HHHH-HHHH---TTCSEEEECCCCCCHHHHHHHHHHHTTCSSCE
T ss_pred HHHH-HHHH---CCCCEEEEECCCCChHHHHHHHHHHHhcCCcE
Confidence 3332 2332 22 35567777643 2344788888877 666
No 301
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=97.56 E-value=0.00025 Score=61.52 Aligned_cols=90 Identities=16% Similarity=0.051 Sum_probs=67.4
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhcCceec-------CCHHhhc-----CCCCEEEEeCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-------EDLDTML-----PKCDIVVVNTP 101 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~ell-----~~aDvVv~~~p 101 (221)
.|++|.|+|.|.+|...++.++.+|. +|++.++++...+.++++|+..+ .++.+.+ ...|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g 270 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 270 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCC
Confidence 48899999999999999999999999 79999987777777788886432 1233222 15899998886
Q ss_pred CChhhhhcchHHHHhcCCCC-CEEEEcCC
Q 027577 102 LTEKTRGMFDKDRIAKMKKG-VLIVNNAR 129 (221)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~g-a~lIn~sr 129 (221)
. +. .-...++.++++ ..++.++-
T Consensus 271 ~-~~----~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 271 R-IE----TMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp C-HH----HHHHHHHTBCTTTCEEEECCC
T ss_pred C-HH----HHHHHHHHHhcCCCEEEEEcc
Confidence 2 22 124567888998 88888764
No 302
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=97.56 E-value=0.00023 Score=61.77 Aligned_cols=90 Identities=17% Similarity=0.101 Sum_probs=66.5
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhcCceec-------CCHHhhcC-----CCCEEEEeCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-------EDLDTMLP-----KCDIVVVNTP 101 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~ell~-----~aDvVv~~~p 101 (221)
.|++|.|+|.|.+|...++.++.+|. +|++.++++...+.++++|+..+ .++.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 270 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 270 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCC
Confidence 58899999999999999999999999 79999987766777777776432 12333221 4899998886
Q ss_pred CChhhhhcchHHHHhcCCCC-CEEEEcCC
Q 027577 102 LTEKTRGMFDKDRIAKMKKG-VLIVNNAR 129 (221)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~g-a~lIn~sr 129 (221)
. +. .-...++.++++ ..++.++-
T Consensus 271 ~-~~----~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 271 R-LD----TMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp C-HH----HHHHHHHHBCTTTCEEEECSC
T ss_pred C-HH----HHHHHHHHhhcCCcEEEEecc
Confidence 2 11 124566778888 88888763
No 303
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.55 E-value=0.00022 Score=62.10 Aligned_cols=84 Identities=17% Similarity=0.175 Sum_probs=55.5
Q ss_pred CEEEEEc-cCHHHHH-HH----HHHccCC-CeE----------EEEcCCCCCh-hHHHhcCce-ecCCHHhhcCC--CCE
Q 027577 37 KTVGTVG-CGRIGKL-LL----QRLKPFN-CNL----------LYHDRVKMDP-QLEKETGAK-FEEDLDTMLPK--CDI 95 (221)
Q Consensus 37 ~~vgIIG-~G~iG~~-iA----~~l~~~G-~~V----------~~~d~~~~~~-~~~~~~g~~-~~~~l~ell~~--aDv 95 (221)
.+||||| +|.||+. .+ +.++..+ ..+ .++|+++... +.++..++. .+.++++++++ .|+
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~iD~ 86 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADKNDTM 86 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSSCCE
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCE
Confidence 4899999 9999998 66 6665443 222 4888876433 344566774 56899999965 899
Q ss_pred EEEeCCCChhhhhcchHHHHhcCCCCCEEE
Q 027577 96 VVVNTPLTEKTRGMFDKDRIAKMKKGVLIV 125 (221)
Q Consensus 96 Vv~~~p~~~~t~~~i~~~~~~~mk~ga~lI 125 (221)
|++++|.... -+-....|+.|..++
T Consensus 87 V~i~tp~~~h-----~~~~~~al~~Gk~V~ 111 (383)
T 3oqb_A 87 FFDAATTQAR-----PGLLTQAINAGKHVY 111 (383)
T ss_dssp EEECSCSSSS-----HHHHHHHHTTTCEEE
T ss_pred EEECCCchHH-----HHHHHHHHHCCCeEE
Confidence 9999994322 122334455555555
No 304
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=97.54 E-value=0.00035 Score=60.73 Aligned_cols=90 Identities=14% Similarity=0.034 Sum_probs=67.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhcCceec-------CCHHhhc-----CCCCEEEEeCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-------EDLDTML-----PKCDIVVVNTP 101 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~ell-----~~aDvVv~~~p 101 (221)
.|++|.|+|.|.+|...++.++.+|. +|++.++++...+.++++|+..+ .++.+.+ ...|+|+-++.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCC
Confidence 58899999999999999999999999 79999987777777777876432 1232222 25899998886
Q ss_pred CChhhhhcchHHHHhcCCCC-CEEEEcCC
Q 027577 102 LTEKTRGMFDKDRIAKMKKG-VLIVNNAR 129 (221)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~g-a~lIn~sr 129 (221)
. +. .-...++.++++ ..++.++-
T Consensus 275 ~-~~----~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 275 T-AQ----TLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp C-HH----HHHHHHHTBCTTTCEEEECCC
T ss_pred C-HH----HHHHHHHHhhcCCCEEEEECC
Confidence 2 11 124567788998 88888764
No 305
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=97.54 E-value=0.00052 Score=58.64 Aligned_cols=96 Identities=19% Similarity=0.308 Sum_probs=67.5
Q ss_pred CCCCCEEEEEcc---CHHHHHHHHHHccC-CCeEEEEcCCCC-Chh----HHHhcCc--eecCCHHhhcCCCCEEEEeCC
Q 027577 33 DLEGKTVGTVGC---GRIGKLLLQRLKPF-NCNLLYHDRVKM-DPQ----LEKETGA--KFEEDLDTMLPKCDIVVVNTP 101 (221)
Q Consensus 33 ~l~g~~vgIIG~---G~iG~~iA~~l~~~-G~~V~~~d~~~~-~~~----~~~~~g~--~~~~~l~ell~~aDvVv~~~p 101 (221)
.+.|.||++||= |++.++++..+..+ |++|.+..|... ..+ .+++.|. ....+++++++++|+|....=
T Consensus 151 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~ 230 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRV 230 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC-
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCc
Confidence 588999999996 69999999999999 999999987542 221 2223353 456799999999999987643
Q ss_pred CCh-----hh-----hhcchHHHHhcCCCCCEEEEcC
Q 027577 102 LTE-----KT-----RGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 102 ~~~-----~t-----~~~i~~~~~~~mk~ga~lIn~s 128 (221)
..+ +. ..-++.+.++..|++++|+.+.
T Consensus 231 q~er~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 267 (310)
T 3csu_A 231 QKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPL 267 (310)
T ss_dssp ----------------CCBCGGGGTTCCTTCEEECCS
T ss_pred cccccCHHHHHHHhhccCCCHHHHhhcCCCCEEECCC
Confidence 111 10 1335667777777777777653
No 306
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.54 E-value=8.7e-05 Score=63.70 Aligned_cols=64 Identities=25% Similarity=0.237 Sum_probs=47.6
Q ss_pred CEEEEEccCHHHHHHHHHHccCCCeEE-EEcCCC-CChhHHH----hcC--ceecCCHHhhcC--CCCEEEEeCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRVK-MDPQLEK----ETG--AKFEEDLDTMLP--KCDIVVVNTP 101 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G~~V~-~~d~~~-~~~~~~~----~~g--~~~~~~l~ell~--~aDvVv~~~p 101 (221)
.+|||||+|.+|...++.+ .-+++|. ++|+++ ...+.+. +.+ ...+.+++++++ +.|+|++++|
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp 76 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTV 76 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSS
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 4899999999999888777 5677765 578765 3333222 234 366789999996 4999999998
No 307
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=97.53 E-value=8.1e-05 Score=64.23 Aligned_cols=93 Identities=15% Similarity=0.169 Sum_probs=60.7
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCC--eEEEEcCCCCChh-----HHHhc------CceecCCHHhhcCCCCEEEEeCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ-----LEKET------GAKFEEDLDTMLPKCDIVVVNTP 101 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~-----~~~~~------g~~~~~~l~ell~~aDvVv~~~p 101 (221)
..++|+|||.|.||..+|..+...|+ +|..+|.+....+ ..+.. .+....++++ +++||+|+++..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG 98 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAG 98 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCC
Confidence 57899999999999999999987787 8999998642211 11110 1223346665 899999999864
Q ss_pred CCh-----------hhhhcchH--HHHhcCCCCCEEEEcC
Q 027577 102 LTE-----------KTRGMFDK--DRIAKMKKGVLIVNNA 128 (221)
Q Consensus 102 ~~~-----------~t~~~i~~--~~~~~mk~ga~lIn~s 128 (221)
... .+..++.. +.+....|++++++++
T Consensus 99 ~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt 138 (330)
T 3ldh_A 99 ARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP 138 (330)
T ss_dssp CCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence 221 11111110 1233447899999987
No 308
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=97.53 E-value=0.00016 Score=62.60 Aligned_cols=67 Identities=21% Similarity=0.276 Sum_probs=43.3
Q ss_pred CEEEEEccCHHHHHHHHHHccC-CCeEEE-EcCCCCCh-hHHHhcCceec-----------------CCHHhhcCCCCEE
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF-NCNLLY-HDRVKMDP-QLEKETGAKFE-----------------EDLDTMLPKCDIV 96 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~-G~~V~~-~d~~~~~~-~~~~~~g~~~~-----------------~~l~ell~~aDvV 96 (221)
.+|||+|+|.||+.+++.+... ++++.+ .|++.... ..+...++... .+++++++++|+|
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV 81 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIV 81 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEE
Confidence 3799999999999999998764 567654 45543211 12222233222 2344555679999
Q ss_pred EEeCCCC
Q 027577 97 VVNTPLT 103 (221)
Q Consensus 97 v~~~p~~ 103 (221)
+.|+|..
T Consensus 82 ~~aTp~~ 88 (340)
T 1b7g_O 82 VDTTPNG 88 (340)
T ss_dssp EECCSTT
T ss_pred EECCCCc
Confidence 9999843
No 309
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=97.53 E-value=7.8e-05 Score=67.45 Aligned_cols=67 Identities=18% Similarity=0.224 Sum_probs=46.7
Q ss_pred CCEEEEEccCHH--HHHHHHHHcc---C-CCeEEEEcCCCCChhHH----H----hc----CceecCCHHhhcCCCCEEE
Q 027577 36 GKTVGTVGCGRI--GKLLLQRLKP---F-NCNLLYHDRVKMDPQLE----K----ET----GAKFEEDLDTMLPKCDIVV 97 (221)
Q Consensus 36 g~~vgIIG~G~i--G~~iA~~l~~---~-G~~V~~~d~~~~~~~~~----~----~~----g~~~~~~l~ell~~aDvVv 97 (221)
.+||+|||.|.| |.++|..+.. + |.+|..||+++...+.. . .. .+....++++.+++||+|+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~VI 82 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 82 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEEE
Confidence 479999999997 5666666642 3 78999999975322111 1 11 1334468888899999999
Q ss_pred EeCCC
Q 027577 98 VNTPL 102 (221)
Q Consensus 98 ~~~p~ 102 (221)
+++|.
T Consensus 83 iaagv 87 (480)
T 1obb_A 83 NTAMV 87 (480)
T ss_dssp ECCCT
T ss_pred ECCCc
Confidence 99973
No 310
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=97.53 E-value=0.00085 Score=58.30 Aligned_cols=96 Identities=11% Similarity=0.115 Sum_probs=66.3
Q ss_pred CCCCCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCC--ChhHH---Hh--------cCceecCCHHhhcCCCCEEEE
Q 027577 33 DLEGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKM--DPQLE---KE--------TGAKFEEDLDTMLPKCDIVVV 98 (221)
Q Consensus 33 ~l~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~--~~~~~---~~--------~g~~~~~~l~ell~~aDvVv~ 98 (221)
.|.|.||++|| .-++.++++..+..+|++|.+..|... +.+.. ++ .++....+++++++++|+|..
T Consensus 185 ~l~glkva~vGD~~nva~Sl~~~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~aDVvyt 264 (353)
T 3sds_A 185 GLEGLKIAWVGDANNVLFDLAIAATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTTVPEVAVKDADVIVT 264 (353)
T ss_dssp SCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEESCHHHHTTTCSEEEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEECCHHHHhcCCCEEEe
Confidence 47999999999 457999999999999999999988643 22221 11 134566899999999999987
Q ss_pred eC--CCChh----------hhhcchHHHHhc--CCCCCEEEEcC
Q 027577 99 NT--PLTEK----------TRGMFDKDRIAK--MKKGVLIVNNA 128 (221)
Q Consensus 99 ~~--p~~~~----------t~~~i~~~~~~~--mk~ga~lIn~s 128 (221)
-+ +...+ ...-++.+.++. ++++++|+.+.
T Consensus 265 d~w~smg~E~~~~~r~~~~~~y~vt~ell~~~~ak~~ai~MHcL 308 (353)
T 3sds_A 265 DTWISMGQETEKIKRLEAFKDFKVTSELAKRGGAKENWKFMHCL 308 (353)
T ss_dssp CCC--------CHHHHHHTTTCCBCHHHHHHHTCCTTCEEEECS
T ss_pred CCccCCchhhHHHHHHHHhhCceecHHHHhhcccCCCcEEECCC
Confidence 43 11111 012356677776 67777777653
No 311
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=97.52 E-value=0.00062 Score=59.38 Aligned_cols=96 Identities=14% Similarity=0.134 Sum_probs=70.4
Q ss_pred CCCCCEEEEEccC--HHHHHHHHHHccCCCeEEEEcCCCCCh----hH-------HHhcC--ceecCCHHhhcCCCCEEE
Q 027577 33 DLEGKTVGTVGCG--RIGKLLLQRLKPFNCNLLYHDRVKMDP----QL-------EKETG--AKFEEDLDTMLPKCDIVV 97 (221)
Q Consensus 33 ~l~g~~vgIIG~G--~iG~~iA~~l~~~G~~V~~~d~~~~~~----~~-------~~~~g--~~~~~~l~ell~~aDvVv 97 (221)
.+.|+||++||=+ +++++++..+..+|++|.+..|....+ +. +++.| +....+++++++++|+|.
T Consensus 177 ~l~glkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDVVy 256 (365)
T 4amu_A 177 NLKNKKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFSTDKILAAQDADVIY 256 (365)
T ss_dssp SCTTCEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEESCHHHHTTTCSEEE
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEECCHHHHhcCCCEEE
Confidence 4899999999976 899999999999999999998754222 21 22334 455689999999999998
Q ss_pred EeC----CCChh---------hhhcchHHHHhcCCCCCEEEEcC
Q 027577 98 VNT----PLTEK---------TRGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 98 ~~~----p~~~~---------t~~~i~~~~~~~mk~ga~lIn~s 128 (221)
.-+ ....+ ...-++.+.++..+++++|+-+.
T Consensus 257 td~W~smg~~~~~~~er~~~~~~y~vt~ell~~a~~dai~MHcL 300 (365)
T 4amu_A 257 TDVWVSLGEPFELFDKRIGELKNFQVDMNMIKAAKNDVIFLHCL 300 (365)
T ss_dssp ECCSCCTTCCHHHHHHHHHHHTTCCBCHHHHHHSCTTCEEEECS
T ss_pred ecccccCCchhhhHHHHHHHhcccccCHHHHHhcCCCcEEECCC
Confidence 742 11111 01336788888888888888875
No 312
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=97.51 E-value=0.00026 Score=60.44 Aligned_cols=95 Identities=19% Similarity=0.289 Sum_probs=67.6
Q ss_pred CCCCCEEEEEcc---CHHHHHHHHHHccCCCeEEEEcCCCC-Chh-H---HHhcCc--eecCCHHhhcCCCCEEEEeCCC
Q 027577 33 DLEGKTVGTVGC---GRIGKLLLQRLKPFNCNLLYHDRVKM-DPQ-L---EKETGA--KFEEDLDTMLPKCDIVVVNTPL 102 (221)
Q Consensus 33 ~l~g~~vgIIG~---G~iG~~iA~~l~~~G~~V~~~d~~~~-~~~-~---~~~~g~--~~~~~l~ell~~aDvVv~~~p~ 102 (221)
.+.|.||++||= |++.++++..+..+|++|.+..|... ..+ . +++.|. ....+++++++++|+|....=.
T Consensus 152 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q 231 (308)
T 1ml4_A 152 RIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQ 231 (308)
T ss_dssp CSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCC
T ss_pred CCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCcc
Confidence 588999999996 59999999999999999999987542 222 1 223343 3457899999999999885532
Q ss_pred C------hhh-----hhcchHHHHhcCCCCCEEEEc
Q 027577 103 T------EKT-----RGMFDKDRIAKMKKGVLIVNN 127 (221)
Q Consensus 103 ~------~~t-----~~~i~~~~~~~mk~ga~lIn~ 127 (221)
. ++. ..-++.+.++..|++++|+.+
T Consensus 232 ~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~ 267 (308)
T 1ml4_A 232 KERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHP 267 (308)
T ss_dssp GGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECC
T ss_pred ccccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECC
Confidence 1 111 123466667777777777765
No 313
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=97.50 E-value=0.00057 Score=59.38 Aligned_cols=95 Identities=12% Similarity=0.086 Sum_probs=67.8
Q ss_pred CCCCCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCCC-hh-H-------HHhcC--ceecCCHHhhcCCCCEEEEeC
Q 027577 33 DLEGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMD-PQ-L-------EKETG--AKFEEDLDTMLPKCDIVVVNT 100 (221)
Q Consensus 33 ~l~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~-~-------~~~~g--~~~~~~l~ell~~aDvVv~~~ 100 (221)
.+.|.||++|| .+++.++++..+..+|++|.+..|.... .+ . ++..| +....+++ +++++|+|..-+
T Consensus 150 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~-av~~aDVVytd~ 228 (355)
T 4a8p_A 150 KLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDV 228 (355)
T ss_dssp CGGGCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECCGG-GGTTCSEEEECC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECCHH-HHcCCCEEEecc
Confidence 58899999999 6899999999999999999999886422 21 1 12334 44567899 999999998633
Q ss_pred ----CCC----hh----h--hhcchHHHHhcCCCCCEEEEcC
Q 027577 101 ----PLT----EK----T--RGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 101 ----p~~----~~----t--~~~i~~~~~~~mk~ga~lIn~s 128 (221)
... ++ . ..-++.+.++.+|++++|+.+.
T Consensus 229 w~smgq~~~~~~er~~~~~~~y~vt~ell~~ak~dai~MHcL 270 (355)
T 4a8p_A 229 WYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCL 270 (355)
T ss_dssp SSEETTEECCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECS
T ss_pred cccCcchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCC
Confidence 100 11 1 1335777777778888888764
No 314
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=97.49 E-value=0.00031 Score=60.58 Aligned_cols=97 Identities=11% Similarity=0.117 Sum_probs=71.8
Q ss_pred CCCCCEEEEEccC--HHHHHHHHHHccCCCeEEEEcCCCC-Ch-hH---H----HhcC--ceecCCHHhhcCCCCEEEEe
Q 027577 33 DLEGKTVGTVGCG--RIGKLLLQRLKPFNCNLLYHDRVKM-DP-QL---E----KETG--AKFEEDLDTMLPKCDIVVVN 99 (221)
Q Consensus 33 ~l~g~~vgIIG~G--~iG~~iA~~l~~~G~~V~~~d~~~~-~~-~~---~----~~~g--~~~~~~l~ell~~aDvVv~~ 99 (221)
.+.|.+|++||=| +++++++..+..+|++|.+..|... .. +. + ++.| +....+++++++++|+|..-
T Consensus 152 ~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd 231 (333)
T 1duv_G 152 AFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTD 231 (333)
T ss_dssp CGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEEC
T ss_pred CCCCcEEEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHHHhCCCCEEEeC
Confidence 5889999999975 9999999999999999999988542 21 12 1 1445 45578999999999999884
Q ss_pred CCC-----C---hh-----hhhcchHHHHhcC-CCCCEEEEcCC
Q 027577 100 TPL-----T---EK-----TRGMFDKDRIAKM-KKGVLIVNNAR 129 (221)
Q Consensus 100 ~p~-----~---~~-----t~~~i~~~~~~~m-k~ga~lIn~sr 129 (221)
.=. . ++ ...-++.+.++.+ +++++|+.+.-
T Consensus 232 ~w~smg~~~~~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcLP 275 (333)
T 1duv_G 232 VWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCLP 275 (333)
T ss_dssp CSSCTTSCTTHHHHHHHHHGGGCBCHHHHHTTCCTTCEEEECSC
T ss_pred CccccCccccchHHHHHHhhccccCHHHHHhccCCCcEEECCCC
Confidence 321 0 11 1234688888888 88999988753
No 315
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=97.49 E-value=0.00024 Score=61.88 Aligned_cols=90 Identities=14% Similarity=0.093 Sum_probs=67.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhcCceec-------CCHHhhcC-----CCCEEEEeCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-------EDLDTMLP-----KCDIVVVNTP 101 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~ell~-----~aDvVv~~~p 101 (221)
.|.+|.|+|.|.+|...++.++..|+ +|++.++++.+.+.++++|+..+ .++.+.+. ..|+|+-++.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g 272 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIG 272 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCC
Confidence 58899999999999999999999999 79999988877788888886532 12222221 4899998887
Q ss_pred CChhhhhcchHHHHhcCCCC-CEEEEcCC
Q 027577 102 LTEKTRGMFDKDRIAKMKKG-VLIVNNAR 129 (221)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~g-a~lIn~sr 129 (221)
. +. .-...+..++++ ..++.++-
T Consensus 273 ~-~~----~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 273 N-VS----VMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp C-HH----HHHHHHHTBCTTTCEEEECSC
T ss_pred C-HH----HHHHHHHHhhccCCEEEEEcc
Confidence 2 21 224567788886 88887763
No 316
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=97.49 E-value=0.00034 Score=60.67 Aligned_cols=90 Identities=19% Similarity=0.131 Sum_probs=67.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhcCceec-------CCHHhhcC-----CCCEEEEeCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-------EDLDTMLP-----KCDIVVVNTP 101 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~ell~-----~aDvVv~~~p 101 (221)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++...+.++++|+..+ .++.+.+. ..|+|+-++.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g 269 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 269 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCC
Confidence 58899999999999999999999999 79999987767777777776432 12333222 4899998886
Q ss_pred CChhhhhcchHHHHhcCCCC-CEEEEcCC
Q 027577 102 LTEKTRGMFDKDRIAKMKKG-VLIVNNAR 129 (221)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~g-a~lIn~sr 129 (221)
.. . .-...++.++++ ..++.++-
T Consensus 270 ~~-~----~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 270 NV-K----VMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp CH-H----HHHHHHHTBCTTTCEEEECSC
T ss_pred cH-H----HHHHHHHhhccCCcEEEEEec
Confidence 21 1 124567888998 88888764
No 317
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=97.49 E-value=0.00082 Score=57.68 Aligned_cols=95 Identities=15% Similarity=0.135 Sum_probs=68.5
Q ss_pred CCCCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCC--ChhHHH-------hcC--ceecCCHHhhcCCCCEEEEeC
Q 027577 33 DLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKM--DPQLEK-------ETG--AKFEEDLDTMLPKCDIVVVNT 100 (221)
Q Consensus 33 ~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~--~~~~~~-------~~g--~~~~~~l~ell~~aDvVv~~~ 100 (221)
.+.|.+|++||= .++.++++..+..+|++|.+..|... +.+... +.| +....+++++++++|+|..-+
T Consensus 152 ~l~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~d~ 231 (321)
T 1oth_A 152 SLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDT 231 (321)
T ss_dssp CCTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred CcCCcEEEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhccCCEEEEec
Confidence 588999999995 56999999999999999999998653 222211 233 556789999999999999843
Q ss_pred ----CCChh--------hhhcchHHHHhcCCCCCEEEEc
Q 027577 101 ----PLTEK--------TRGMFDKDRIAKMKKGVLIVNN 127 (221)
Q Consensus 101 ----p~~~~--------t~~~i~~~~~~~mk~ga~lIn~ 127 (221)
....+ ...-++.+.++.+|++++|+.+
T Consensus 232 w~s~g~e~~~~~~~~~~~~y~v~~~~l~~a~~dai~mH~ 270 (321)
T 1oth_A 232 WISMGREEEKKKRLQAFQGYQVTMKTAKVAASDWTFLHC 270 (321)
T ss_dssp SSCTTCGGGHHHHHHHTTTCCBCHHHHHTSCTTCEEEEC
T ss_pred cccccchhhhHHHHHhccCceECHHHHhhcCCCCEEECC
Confidence 11111 0133577777888888888775
No 318
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=97.48 E-value=0.00011 Score=59.52 Aligned_cols=65 Identities=18% Similarity=0.251 Sum_probs=46.4
Q ss_pred CCEEEEEccCHHHHHHHHH--HccCCCeEE-EEcCCCCChh-HHHhcCceecCCHHhhcC-CCCEEEEeCC
Q 027577 36 GKTVGTVGCGRIGKLLLQR--LKPFNCNLL-YHDRVKMDPQ-LEKETGAKFEEDLDTMLP-KCDIVVVNTP 101 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~--l~~~G~~V~-~~d~~~~~~~-~~~~~g~~~~~~l~ell~-~aDvVv~~~p 101 (221)
.++|+|||+|.+|+.+++. ... |+++. ++|.++.... ......+...++++++++ +.|+|++|+|
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~ell~~~ID~ViIA~P 149 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPGRIEIALLTVP 149 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTTTCCEEEECSC
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcCCeeecHHhHHHHHHcCCCEEEEeCC
Confidence 3689999999999999996 334 78754 5676654322 122223444678899886 5999999999
No 319
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=97.48 E-value=9.9e-05 Score=66.69 Aligned_cols=67 Identities=15% Similarity=0.082 Sum_probs=46.8
Q ss_pred CCEEEEEccCHH-HHHHHHHHccC-----CCeEEEEcCCCCChhH----HH----hc----CceecCCHHhhcCCCCEEE
Q 027577 36 GKTVGTVGCGRI-GKLLLQRLKPF-----NCNLLYHDRVKMDPQL----EK----ET----GAKFEEDLDTMLPKCDIVV 97 (221)
Q Consensus 36 g~~vgIIG~G~i-G~~iA~~l~~~-----G~~V~~~d~~~~~~~~----~~----~~----g~~~~~~l~ell~~aDvVv 97 (221)
.+||+|||.|.+ |.++|..|... +.+|..||+.+...+. .. .. .+....++++.++.||+|+
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~VV 107 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM 107 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEEE
Confidence 469999999998 66677666444 5679999996532211 01 11 1333468888999999999
Q ss_pred EeCCC
Q 027577 98 VNTPL 102 (221)
Q Consensus 98 ~~~p~ 102 (221)
+++|.
T Consensus 108 iaag~ 112 (472)
T 1u8x_X 108 AHIRV 112 (472)
T ss_dssp ECCCT
T ss_pred EcCCC
Confidence 99985
No 320
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=97.48 E-value=0.0004 Score=59.75 Aligned_cols=91 Identities=18% Similarity=0.225 Sum_probs=67.0
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec---C---C-HHhh---c-----CCCCEEEEe
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE---E---D-LDTM---L-----PKCDIVVVN 99 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~---~---~-l~el---l-----~~aDvVv~~ 99 (221)
.|++|.|+|.|.+|...++.++.+|++|++.++++...+.++++|+..+ . + .+++ . ...|+|+-+
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~ 247 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC 247 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEEC
Confidence 4889999999999999999999999999999987655666777776321 1 1 1222 2 358999998
Q ss_pred CCCChhhhhcchHHHHhcCCCCCEEEEcCCC
Q 027577 100 TPLTEKTRGMFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 100 ~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg 130 (221)
+... . .-...+..++++..++.++..
T Consensus 248 ~g~~-~----~~~~~~~~l~~~G~iv~~G~~ 273 (352)
T 1e3j_A 248 SGNE-K----CITIGINITRTGGTLMLVGMG 273 (352)
T ss_dssp SCCH-H----HHHHHHHHSCTTCEEEECSCC
T ss_pred CCCH-H----HHHHHHHHHhcCCEEEEEecC
Confidence 8632 1 124567788999999998753
No 321
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=97.48 E-value=0.00031 Score=59.83 Aligned_cols=93 Identities=18% Similarity=0.277 Sum_probs=68.7
Q ss_pred CCCCCEEEEEcc---CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCCh-----
Q 027577 33 DLEGKTVGTVGC---GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTE----- 104 (221)
Q Consensus 33 ~l~g~~vgIIG~---G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~----- 104 (221)
.+.|.||++||= +++.++++..+..+|++|.+..|....++. ...| ...+++++++++|+|....-..+
T Consensus 144 ~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~-~~~g--~~~d~~eav~~aDvvyt~~~q~er~~~~ 220 (304)
T 3r7f_A 144 TFKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEE-NTFG--TYVSMDEAVESSDVVMLLRIQNERHQSA 220 (304)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTT-CSSC--EECCHHHHHHHCSEEEECCCCTTTCCSS
T ss_pred CCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEECCCccCcch-hhcC--ccCCHHHHhCCCCEEEeccchhhccccc
Confidence 588999999995 579999999999999999999875422221 2233 34589999999999988532111
Q ss_pred ----h--hhhcchHHHHhcCCCCCEEEEcC
Q 027577 105 ----K--TRGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 105 ----~--t~~~i~~~~~~~mk~ga~lIn~s 128 (221)
+ ...-++.+.++.++++++|+.+.
T Consensus 221 ~~~~~~~~~y~v~~~~l~~a~~~ai~mHcl 250 (304)
T 3r7f_A 221 VSQEGYLNKYGLTVERAERMKRHAIIMHPA 250 (304)
T ss_dssp CCSTTHHHHHSBCHHHHTTSCTTCEEECCS
T ss_pred hhHHHHhCCCccCHHHHhhcCCCCEEECCC
Confidence 1 12346888888899999988764
No 322
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.46 E-value=0.00036 Score=55.65 Aligned_cols=91 Identities=11% Similarity=0.140 Sum_probs=59.1
Q ss_pred CEEEEEc-cCHHHHHHHHHHc-cCCCeEEEEcCCCC-ChhHH--HhcCcee-------cCCHHhhcCCCCEEEEeCCCCh
Q 027577 37 KTVGTVG-CGRIGKLLLQRLK-PFNCNLLYHDRVKM-DPQLE--KETGAKF-------EEDLDTMLPKCDIVVVNTPLTE 104 (221)
Q Consensus 37 ~~vgIIG-~G~iG~~iA~~l~-~~G~~V~~~d~~~~-~~~~~--~~~g~~~-------~~~l~ell~~aDvVv~~~p~~~ 104 (221)
|+|.|.| .|.||+.+++.|. ..|++|++.+|++. ..+.. ...++.. .++++++++.+|+|+.+.....
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~n 85 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMESG 85 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCCH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCCC
Confidence 5799999 6999999999999 89999999998643 22221 1112221 1345677899999999887421
Q ss_pred hhhhcchHHHHhcCCC--CCEEEEcCCCC
Q 027577 105 KTRGMFDKDRIAKMKK--GVLIVNNARGA 131 (221)
Q Consensus 105 ~t~~~i~~~~~~~mk~--ga~lIn~srg~ 131 (221)
.. ....+..|++ ...||++|...
T Consensus 86 -~~---~~~~~~~~~~~~~~~iv~iSs~~ 110 (221)
T 3r6d_A 86 -SD---MASIVKALSRXNIRRVIGVSMAG 110 (221)
T ss_dssp -HH---HHHHHHHHHHTTCCEEEEEEETT
T ss_pred -hh---HHHHHHHHHhcCCCeEEEEeece
Confidence 11 3344444432 24678777544
No 323
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=97.46 E-value=0.00034 Score=51.69 Aligned_cols=99 Identities=18% Similarity=0.243 Sum_probs=70.2
Q ss_pred CEEEEEcc----CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchH
Q 027577 37 KTVGTVGC----GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK 112 (221)
Q Consensus 37 ~~vgIIG~----G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~ 112 (221)
++|+|||. +..|..+.+.|+..|++|+.+++.... -.|...+.++.++-. .|++++++| .+.+..++.+
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~-----i~G~~~y~sl~dlp~-vDlavi~~p-~~~v~~~v~e 77 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGE-----VLGKTIINERPVIEG-VDTVTLYIN-PQNQLSEYNY 77 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSE-----ETTEECBCSCCCCTT-CCEEEECSC-HHHHGGGHHH
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCc-----CCCeeccCChHHCCC-CCEEEEEeC-HHHHHHHHHH
Confidence 68999996 579999999999999999999985421 246666778888777 999999999 3344444433
Q ss_pred HHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 113 DRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 113 ~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
..+ +...+++++. |- .++++.+.+++..+.
T Consensus 78 -~~~-~g~k~v~~~~--G~--~~~e~~~~a~~~Gir 107 (122)
T 3ff4_A 78 -ILS-LKPKRVIFNP--GT--ENEELEEILSENGIE 107 (122)
T ss_dssp -HHH-HCCSEEEECT--TC--CCHHHHHHHHHTTCE
T ss_pred -HHh-cCCCEEEECC--CC--ChHHHHHHHHHcCCe
Confidence 322 3444666654 32 356777777777777
No 324
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=97.45 E-value=0.00035 Score=59.86 Aligned_cols=98 Identities=14% Similarity=0.121 Sum_probs=60.9
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCC--eEEEEcCCCCChhH-HHh--------cCceecCCHHhhcCCCCEEEEeCCCCh
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQL-EKE--------TGAKFEEDLDTMLPKCDIVVVNTPLTE 104 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~-~~~--------~g~~~~~~l~ell~~aDvVv~~~p~~~ 104 (221)
.+||+|||.|.+|.+++..+...+. ++..+|......+. +.+ ..+....+..+.+++||+|+++.+...
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~~ 84 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAPQ 84 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCCC
Confidence 3699999999999999999876665 89999985422211 111 112222244677999999999986432
Q ss_pred hh-----------hhcch--HHHHhcCCCCCEEEEcCCCCccCH
Q 027577 105 KT-----------RGMFD--KDRIAKMKKGVLIVNNARGAIMDT 135 (221)
Q Consensus 105 ~t-----------~~~i~--~~~~~~mk~ga~lIn~srg~~vd~ 135 (221)
.. ..++. .+.+....|+++++++ ..++|.
T Consensus 85 ~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~--tNPv~~ 126 (318)
T 1ez4_A 85 KPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA--ANPVDI 126 (318)
T ss_dssp --------CHHHHHHHHHHHHHHHHHTTCCSEEEEC--SSSHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe--CCcHHH
Confidence 11 01111 0223334789999997 445554
No 325
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=97.45 E-value=0.0003 Score=60.53 Aligned_cols=98 Identities=15% Similarity=0.093 Sum_probs=60.8
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCC--eEEEEcCCCCChhH-HHhc--------CceecCCHHhhcCCCCEEEEeCCCCh
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQL-EKET--------GAKFEEDLDTMLPKCDIVVVNTPLTE 104 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~-~~~~--------g~~~~~~l~ell~~aDvVv~~~p~~~ 104 (221)
.+||+|||.|.+|.+++..+...+. ++..+|......+. +.++ .+....+..+.+++||+|+++.+...
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~~ 88 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAPQ 88 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 4799999999999999999876665 79999985422211 1111 12222244677999999999986432
Q ss_pred hh-----------hhcchH--HHHhcCCCCCEEEEcCCCCccCH
Q 027577 105 KT-----------RGMFDK--DRIAKMKKGVLIVNNARGAIMDT 135 (221)
Q Consensus 105 ~t-----------~~~i~~--~~~~~mk~ga~lIn~srg~~vd~ 135 (221)
.. ..++.. +.+....|+++++++ ..++|.
T Consensus 89 k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~--tNPv~~ 130 (326)
T 2zqz_A 89 KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA--ANPVDI 130 (326)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC--SSSHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe--CCcHHH
Confidence 11 011110 122333689999997 445554
No 326
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=97.43 E-value=0.00023 Score=57.63 Aligned_cols=97 Identities=19% Similarity=0.116 Sum_probs=61.3
Q ss_pred CCCCEEEEEc-cCHHHHHHHHHHccCC-CeEEEEcCCCCChhHHHhcCce-------ecCCHHhhcCCCCEEEEeCCCCh
Q 027577 34 LEGKTVGTVG-CGRIGKLLLQRLKPFN-CNLLYHDRVKMDPQLEKETGAK-------FEEDLDTMLPKCDIVVVNTPLTE 104 (221)
Q Consensus 34 l~g~~vgIIG-~G~iG~~iA~~l~~~G-~~V~~~d~~~~~~~~~~~~g~~-------~~~~l~ell~~aDvVv~~~p~~~ 104 (221)
...|+|.|.| .|.||+.+++.|...| ++|++++|++.........++. ..++++++++.+|+|+.+.....
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~ 100 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGED 100 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTT
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCc
Confidence 3457899999 6999999999999999 8999999865322111111221 11345677899999998876432
Q ss_pred hhhhcchHHHHhcCCC--CCEEEEcCCCCc
Q 027577 105 KTRGMFDKDRIAKMKK--GVLIVNNARGAI 132 (221)
Q Consensus 105 ~t~~~i~~~~~~~mk~--ga~lIn~srg~~ 132 (221)
.. ......+..|++ ...||++|....
T Consensus 101 ~~--~~~~~~~~~~~~~~~~~iV~iSS~~~ 128 (236)
T 3qvo_A 101 LD--IQANSVIAAMKACDVKRLIFVLSLGI 128 (236)
T ss_dssp HH--HHHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred hh--HHHHHHHHHHHHcCCCEEEEEeccee
Confidence 21 112233444432 247888887443
No 327
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.43 E-value=0.00026 Score=63.43 Aligned_cols=108 Identities=15% Similarity=0.248 Sum_probs=67.6
Q ss_pred CEEEEEccCHHHHHHHHHHccC-CCeE-EEEcCCCCChhHH-Hhc-C----------------------ceecCCHHhhc
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF-NCNL-LYHDRVKMDPQLE-KET-G----------------------AKFEEDLDTML 90 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~-G~~V-~~~d~~~~~~~~~-~~~-g----------------------~~~~~~l~ell 90 (221)
.+|||||+|.||+.+++.+... +++| .++|++....+.+ .+. | +..++++++++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeLL 103 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLIL 103 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHHh
Confidence 5899999999999999988654 6674 4567765333222 222 3 34567999999
Q ss_pred C--CCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCC-ccCHHHHHHHHHhCCce
Q 027577 91 P--KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGA-IMDTQAVVDACSSGHIA 148 (221)
Q Consensus 91 ~--~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~-~vd~~al~~al~~g~i~ 148 (221)
+ +.|+|++++|. +.... +-.+..|+.|..++.....- ...-+.|.++.++.++.
T Consensus 104 ~d~dIDaVviaTp~-p~~H~---e~a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvv 160 (446)
T 3upl_A 104 SNPLIDVIIDATGI-PEVGA---ETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVI 160 (446)
T ss_dssp TCTTCCEEEECSCC-HHHHH---HHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCCCCEEEEcCCC-hHHHH---HHHHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCe
Confidence 7 58999999983 22211 22344566777777533211 11234566666665555
No 328
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=97.43 E-value=0.0014 Score=58.09 Aligned_cols=113 Identities=20% Similarity=0.267 Sum_probs=73.0
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHcc-CCCeEE-EEcCC-------CCChhHHH----hcC-------ceecCCHHhhc
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKP-FNCNLL-YHDRV-------KMDPQLEK----ETG-------AKFEEDLDTML 90 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~-~G~~V~-~~d~~-------~~~~~~~~----~~g-------~~~~~~l~ell 90 (221)
+.++.|++|.|.|+|++|+..|+.|.. .|.+|+ +.|.+ ....+... ..+ .+.. +.++++
T Consensus 204 g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~-~~~eil 282 (415)
T 2tmg_A 204 GIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERI-TNEELL 282 (415)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEE-CHHHHT
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEc-Cchhhh
Confidence 346899999999999999999999998 999987 34432 11222111 111 2233 455665
Q ss_pred -CCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEee
Q 027577 91 -PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGD 153 (221)
Q Consensus 91 -~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lD 153 (221)
.+||+++-|.. .+.++.+....++ -.+|+-.+.+.+ ..++- +.|.+..+. .+=|
T Consensus 283 ~~~~DIliP~A~-----~n~i~~~~a~~l~-ak~V~EgAN~p~-t~~a~-~~l~~~Gi~-~~PD 337 (415)
T 2tmg_A 283 ELDVDILVPAAL-----EGAIHAGNAERIK-AKAVVEGANGPT-TPEAD-EILSRRGIL-VVPD 337 (415)
T ss_dssp TCSCSEEEECSS-----TTSBCHHHHTTCC-CSEEECCSSSCB-CHHHH-HHHHHTTCE-EECH
T ss_pred cCCCcEEEecCC-----cCccCcccHHHcC-CeEEEeCCCccc-CHHHH-HHHHHCCCE-EECh
Confidence 47999999886 3456677777773 456666666665 44443 556666665 3444
No 329
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=97.42 E-value=0.0001 Score=63.49 Aligned_cols=90 Identities=17% Similarity=0.205 Sum_probs=64.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhcCceec-----CCHHhhc------CCCCEEEEeCCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-----EDLDTML------PKCDIVVVNTPL 102 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell------~~aDvVv~~~p~ 102 (221)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++...+.++++|+..+ .++.+.+ ...|+|+-++..
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGA 246 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 78999999999999999999999999 89999987655566666675422 1222222 247888888762
Q ss_pred ChhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 103 TEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
.+ .-...+..++++..++.++.
T Consensus 247 ~~-----~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 247 PK-----ALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp HH-----HHHHHHHHEEEEEEEEECCC
T ss_pred HH-----HHHHHHHHHhcCCEEEEEcc
Confidence 11 12345667788888887754
No 330
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=97.42 E-value=0.00043 Score=58.62 Aligned_cols=69 Identities=17% Similarity=0.127 Sum_probs=56.5
Q ss_pred CCCCCEEEEEcc---CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCC
Q 027577 33 DLEGKTVGTVGC---GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPL 102 (221)
Q Consensus 33 ~l~g~~vgIIG~---G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~ 102 (221)
.+.|.||++||= +++.++++..+..+|++|.+..|....++...+.|+....+++++++++|+|.. +-.
T Consensus 143 ~l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~g~~~~~d~~eav~~aDvvy~-~~~ 214 (291)
T 3d6n_B 143 EVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRDVEVFKVDVFDDVDKGIDWADVVIW-LRL 214 (291)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTGGGGCEEEESSHHHHHHHCSEEEE-CCC
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchhCCchHHHCCCEEEcCHHHHhCCCCEEEE-eCc
Confidence 488999999995 899999999999999999999875422222335577777899999999999998 653
No 331
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=97.42 E-value=0.00016 Score=60.92 Aligned_cols=88 Identities=15% Similarity=0.122 Sum_probs=64.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecC------CHHhhcCCCCEEEEeCCCChhhh
Q 027577 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEE------DLDTMLPKCDIVVVNTPLTEKTR 107 (221)
Q Consensus 35 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~------~l~ell~~aDvVv~~~p~~~~t~ 107 (221)
.|++|.|+|. |.+|...++.++..|++|++.++++...+.++++|...+- ++.+.+..+|+|+- +.. +
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~-~--- 199 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG-K--- 199 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC-T---
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH-H---
Confidence 4889999998 9999999999999999999999876666666777754321 12233367899888 753 1
Q ss_pred hcchHHHHhcCCCCCEEEEcCC
Q 027577 108 GMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn~sr 129 (221)
.-...++.|+++..++.++.
T Consensus 200 --~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 200 --EVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp --THHHHHTTEEEEEEEEEC--
T ss_pred --HHHHHHHhhccCCEEEEEeC
Confidence 23456778888888888753
No 332
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=97.42 E-value=0.00034 Score=61.54 Aligned_cols=92 Identities=18% Similarity=0.195 Sum_probs=66.4
Q ss_pred CCCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhcCceec-----CCHHh----hc--CCCCEEEEeCC
Q 027577 34 LEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-----EDLDT----ML--PKCDIVVVNTP 101 (221)
Q Consensus 34 l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e----ll--~~aDvVv~~~p 101 (221)
-.|.+|.|+|.|.+|...++.++.+|+ +|++.++++...+.++++|+..+ .++.+ +. ...|+|+-++.
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g 291 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATG 291 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCC
Confidence 358999999999999999999999999 89999987766677778886532 12222 22 25999999987
Q ss_pred CChhhhhcchHHHHhcC----CCCCEEEEcCC
Q 027577 102 LTEKTRGMFDKDRIAKM----KKGVLIVNNAR 129 (221)
Q Consensus 102 ~~~~t~~~i~~~~~~~m----k~ga~lIn~sr 129 (221)
....+. ...+..+ +++..++.++-
T Consensus 292 ~~~~~~----~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 292 VPQLVW----PQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CHHHHH----HHHHHHHHHCSCCCCEEEECSC
T ss_pred CcHHHH----HHHHHHHHhccCCCcEEEEeCC
Confidence 332221 2233344 89999999874
No 333
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=97.41 E-value=0.0006 Score=61.13 Aligned_cols=102 Identities=21% Similarity=0.201 Sum_probs=71.4
Q ss_pred cCCCCCEEEEEccC----------HHHHHHHHHHccCCCeEEEEcCCCCChhHHHhc-CceecCCHHhhcCCCCEEEEeC
Q 027577 32 YDLEGKTVGTVGCG----------RIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET-GAKFEEDLDTMLPKCDIVVVNT 100 (221)
Q Consensus 32 ~~l~g~~vgIIG~G----------~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~-g~~~~~~l~ell~~aDvVv~~~ 100 (221)
..+.|+||+|+|+. +-...+++.|...|.+|.+|||... .+....+ ++..+.++++.++.+|+|++++
T Consensus 318 ~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~-~~~~~~~~~~~~~~~~~~~~~~ad~vvi~t 396 (446)
T 4a7p_A 318 GDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGV-EQASKMLTDVEFVENPYAAADGADALVIVT 396 (446)
T ss_dssp SCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCH-HHHGGGCSSCCBCSCHHHHHTTBSEEEECS
T ss_pred ccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCC-HhHHHhcCCceEecChhHHhcCCCEEEEee
Confidence 46899999999987 5688999999999999999998542 2222222 5666778899999999999999
Q ss_pred CCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHH
Q 027577 101 PLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAV 138 (221)
Q Consensus 101 p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al 138 (221)
.-.+ .+.+--....+.|+ ..+|+|+ |+ +.+.+.+
T Consensus 397 ~~~~-f~~~d~~~~~~~~~-~~~i~D~-r~-~~~~~~~ 430 (446)
T 4a7p_A 397 EWDA-FRALDLTRIKNSLK-SPVLVDL-RN-IYPPAEL 430 (446)
T ss_dssp CCTT-TTSCCHHHHHTTBS-SCBEECS-SC-CSCHHHH
T ss_pred CCHH-hhcCCHHHHHHhcC-CCEEEEC-CC-CCCHHHH
Confidence 7432 23222233445565 4678885 54 4555444
No 334
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=97.41 E-value=0.00024 Score=61.31 Aligned_cols=91 Identities=22% Similarity=0.206 Sum_probs=67.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhcCceec-C-C---HHh----hc----CCCCEEEEeC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-E-D---LDT----ML----PKCDIVVVNT 100 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-~-~---l~e----ll----~~aDvVv~~~ 100 (221)
.|.+|.|+|.|.+|...++.++.+|. +|++.++++...+.++++|+..+ + + .++ +. ...|+|+-++
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 250 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 250 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECC
Confidence 48899999999999999999999999 89999987655667777776421 1 1 111 11 3589999988
Q ss_pred CCChhhhhcchHHHHhcCCCCCEEEEcCCC
Q 027577 101 PLTEKTRGMFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 101 p~~~~t~~~i~~~~~~~mk~ga~lIn~srg 130 (221)
.. +. .-...++.++++..++.++-.
T Consensus 251 g~-~~----~~~~~~~~l~~~G~iv~~G~~ 275 (356)
T 1pl8_A 251 GA-EA----SIQAGIYATRSGGTLVLVGLG 275 (356)
T ss_dssp CC-HH----HHHHHHHHSCTTCEEEECSCC
T ss_pred CC-hH----HHHHHHHHhcCCCEEEEEecC
Confidence 72 21 124567789999999998753
No 335
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=97.41 E-value=0.00017 Score=61.82 Aligned_cols=91 Identities=22% Similarity=0.230 Sum_probs=66.9
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHhhc----CCCCEEEEeCCCChh
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTML----PKCDIVVVNTPLTEK 105 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell----~~aDvVv~~~p~~~~ 105 (221)
.|++|.|+|.|.+|..+++.++.+|++|++.++++...+.++++|...+ .++.+.+ ...|+|+.++...+
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~- 242 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKP- 242 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHH-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHH-
Confidence 4889999999999999999999999999999987655566666775422 1222222 46899998886322
Q ss_pred hhhcchHHHHhcCCCCCEEEEcCCC
Q 027577 106 TRGMFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 106 t~~~i~~~~~~~mk~ga~lIn~srg 130 (221)
.....+..|+++..++.++..
T Consensus 243 ----~~~~~~~~l~~~G~~v~~g~~ 263 (339)
T 1rjw_A 243 ----AFQSAYNSIRRGGACVLVGLP 263 (339)
T ss_dssp ----HHHHHHHHEEEEEEEEECCCC
T ss_pred ----HHHHHHHHhhcCCEEEEeccc
Confidence 124566778888899988754
No 336
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=97.41 E-value=0.00043 Score=59.30 Aligned_cols=101 Identities=17% Similarity=0.180 Sum_probs=63.3
Q ss_pred CCCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCC--CCh-----hHHHh-----c--CceecCCHHhhcCCCCEEEE
Q 027577 34 LEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVK--MDP-----QLEKE-----T--GAKFEEDLDTMLPKCDIVVV 98 (221)
Q Consensus 34 l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~--~~~-----~~~~~-----~--g~~~~~~l~ell~~aDvVv~ 98 (221)
...++|+|||.|.||..+|..+...|+ +|..+|+++ ... +.... . .+....+ .+.+++||+|++
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDvVIi 84 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSD-YADTADSDVVVI 84 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESC-GGGGTTCSEEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCC-HHHhCCCCEEEE
Confidence 346899999999999999999998898 999999863 111 11111 1 1222234 467899999999
Q ss_pred eCCC--Chh---------hhhcchH--HHHhcCCCCCEEEEcCCCCccCHHH
Q 027577 99 NTPL--TEK---------TRGMFDK--DRIAKMKKGVLIVNNARGAIMDTQA 137 (221)
Q Consensus 99 ~~p~--~~~---------t~~~i~~--~~~~~mk~ga~lIn~srg~~vd~~a 137 (221)
+... .|. +..++.. +.+....|++++++++ .++|.-.
T Consensus 85 aag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs--NPvd~~t 134 (315)
T 3tl2_A 85 TAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT--NPVDAMT 134 (315)
T ss_dssp CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHHHHH
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC--ChHHHHH
Confidence 9742 111 1111111 1233346899999997 4444433
No 337
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.40 E-value=0.00039 Score=59.87 Aligned_cols=111 Identities=10% Similarity=0.144 Sum_probs=71.1
Q ss_pred CEEEEEccCHHHHHHHHHHccC---------CCeEE-EEcCCCCCh-----h-HHH-hc-CceecC--CHHhhcC--CCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF---------NCNLL-YHDRVKMDP-----Q-LEK-ET-GAKFEE--DLDTMLP--KCD 94 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~---------G~~V~-~~d~~~~~~-----~-~~~-~~-g~~~~~--~l~ell~--~aD 94 (221)
.+|||||+|.||+.+++.+... +.+|. ++|++.... . ... .. ....+. +++++++ +.|
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~iD 82 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADYD 82 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSCCS
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCCCC
Confidence 3899999999999999998754 66655 456653211 1 111 11 112233 8899884 699
Q ss_pred EEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCcc-CHHHHHHHHHhCCce
Q 027577 95 IVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIM-DTQAVVDACSSGHIA 148 (221)
Q Consensus 95 vVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~v-d~~al~~al~~g~i~ 148 (221)
+|+.|+|....... .-+-....|+.|..+|....+.+. .-+.|.+..++.+..
T Consensus 83 vVv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~ 136 (327)
T 3do5_A 83 VLIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVR 136 (327)
T ss_dssp EEEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCc
Confidence 99999994432111 223346678899999988666553 456777777777665
No 338
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=97.40 E-value=0.00031 Score=56.88 Aligned_cols=67 Identities=19% Similarity=0.185 Sum_probs=46.6
Q ss_pred CCEEEEEccCHHHHHHHHHH--ccCCCeEE-EEcCCCC-ChhH--HHhcCceecCCHHhhcCC--CCEEEEeCCC
Q 027577 36 GKTVGTVGCGRIGKLLLQRL--KPFNCNLL-YHDRVKM-DPQL--EKETGAKFEEDLDTMLPK--CDIVVVNTPL 102 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l--~~~G~~V~-~~d~~~~-~~~~--~~~~g~~~~~~l~ell~~--aDvVv~~~p~ 102 (221)
.++++|+|+|++|+.+++.+ ...|+++. ++|.++. .... .....+...+++++++++ .|++++|+|.
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL~~~v~~~~Id~vIIAvPs 158 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPS 158 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEEGGGHHHHC-CCSCCEEEECSCG
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeCHHHHHHHHHHcCCCEEEEecCc
Confidence 46899999999999999984 45678855 5677654 3221 122223345688888874 9999999993
No 339
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=97.40 E-value=0.0009 Score=52.83 Aligned_cols=93 Identities=14% Similarity=0.119 Sum_probs=59.4
Q ss_pred CEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec-CCH----HhhcCCCCEEEEeCCCChhhhhc-
Q 027577 37 KTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-EDL----DTMLPKCDIVVVNTPLTEKTRGM- 109 (221)
Q Consensus 37 ~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~~l----~ell~~aDvVv~~~p~~~~t~~~- 109 (221)
|+|.|.| .|.||+.+++.|.+.|++|++.+|++...+... .++..+ .|+ .+.+..+|+|+.+..........
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~ 79 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKH 79 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTTSH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhhhhhcCCCEEEECCcCCccccchH
Confidence 5799999 599999999999999999999999753222211 233211 111 16778999999988654322111
Q ss_pred --chHHHHhcCCC--CCEEEEcCCC
Q 027577 110 --FDKDRIAKMKK--GVLIVNNARG 130 (221)
Q Consensus 110 --i~~~~~~~mk~--ga~lIn~srg 130 (221)
.....++.+++ ...+|.+|..
T Consensus 80 ~~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 80 VTSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp HHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred HHHHHHHHHHHHhcCCceEEEEecc
Confidence 12334555544 3567777653
No 340
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=97.39 E-value=0.00081 Score=53.37 Aligned_cols=93 Identities=14% Similarity=0.118 Sum_probs=59.0
Q ss_pred CEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec-CCH----HhhcCCCCEEEEeCCCC--h---h
Q 027577 37 KTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-EDL----DTMLPKCDIVVVNTPLT--E---K 105 (221)
Q Consensus 37 ~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~~l----~ell~~aDvVv~~~p~~--~---~ 105 (221)
|+|.|.|. |.||+.+++.|.+.|++|++.+|++.........++..+ .|+ .+.+..+|+|+.+.... + .
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~ 80 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGRGY 80 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSCTH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCccCCCcchhh
Confidence 57999996 999999999999999999999986532222211233221 122 16778999999887642 1 1
Q ss_pred hhhcchHHHHhcCCC-CCEEEEcCC
Q 027577 106 TRGMFDKDRIAKMKK-GVLIVNNAR 129 (221)
Q Consensus 106 t~~~i~~~~~~~mk~-ga~lIn~sr 129 (221)
..-......++.+++ +..+|.+|.
T Consensus 81 ~n~~~~~~l~~a~~~~~~~~v~~SS 105 (224)
T 3h2s_A 81 LHLDFATHLVSLLRNSDTLAVFILG 105 (224)
T ss_dssp HHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEec
Confidence 111112345555543 467888765
No 341
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=97.39 E-value=0.00023 Score=60.93 Aligned_cols=87 Identities=17% Similarity=0.222 Sum_probs=60.6
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec----C---CHHhh-cCCCCEEEEeCCCChhhh
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----E---DLDTM-LPKCDIVVVNTPLTEKTR 107 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~----~---~l~el-l~~aDvVv~~~p~~~~t~ 107 (221)
.+++.|+|+|.+|+.+++.|...|. |.+.|+++...+ ..+.++... . .++++ ++++|.|+++++..+.
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~-- 190 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSE-- 190 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHH--
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHH--
Confidence 5689999999999999999999999 999998765555 555555422 1 23344 6789999999984432
Q ss_pred hcchHHHHhcCCCCCEEEE
Q 027577 108 GMFDKDRIAKMKKGVLIVN 126 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn 126 (221)
.+.-....+.+.+...++-
T Consensus 191 n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 191 TIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp HHHHHHHHHTTCTTSEEEE
T ss_pred HHHHHHHHHHHCCCCeEEE
Confidence 3333445566777645544
No 342
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=97.38 E-value=0.00097 Score=59.80 Aligned_cols=95 Identities=18% Similarity=0.256 Sum_probs=67.3
Q ss_pred cCCCCCEEEEEccC----------HHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcC--ceecCCHHhhcCCCCEEEEe
Q 027577 32 YDLEGKTVGTVGCG----------RIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG--AKFEEDLDTMLPKCDIVVVN 99 (221)
Q Consensus 32 ~~l~g~~vgIIG~G----------~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g--~~~~~~l~ell~~aDvVv~~ 99 (221)
..+.|+||+|+|+- +-...+++.|...|.+|.+|||... .+.....+ +....++++.++.+|+|+++
T Consensus 314 ~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~-~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~ 392 (450)
T 3gg2_A 314 GNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAM-KEAQKRLGDKVEYTTDMYDAVRGAEALFHV 392 (450)
T ss_dssp TCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHGGGSEECSSHHHHTTTCSCEEEC
T ss_pred ccCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCc-HHHHHhcCccceecCCHHHHhcCCCEEEEc
Confidence 46899999999974 2478899999999999999998542 22222233 66677889999999999999
Q ss_pred CCCChhhhhcchHHHHhcCCCCCEEEEcCCC
Q 027577 100 TPLTEKTRGMFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 100 ~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg 130 (221)
++-. +.+.+--....+.|+ ..+|+|+ |+
T Consensus 393 t~~~-~f~~~~~~~~~~~~~-~~~i~D~-r~ 420 (450)
T 3gg2_A 393 TEWK-EFRMPDWSALSQAMA-ASLVIDG-RN 420 (450)
T ss_dssp SCCG-GGSSCCHHHHHHHSS-SCEEEES-SC
T ss_pred cCCH-HHhhcCHHHHHHhcC-CCEEEEC-CC
Confidence 9733 333322233444565 5688885 54
No 343
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.38 E-value=0.00011 Score=64.97 Aligned_cols=89 Identities=16% Similarity=0.178 Sum_probs=56.6
Q ss_pred CEEEEEccCHHHHHHHHHHccCC---CeEEEEcCCCCChhH-HHhc------Ccee-------cCCHHhhcCC--CCEEE
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFN---CNLLYHDRVKMDPQL-EKET------GAKF-------EEDLDTMLPK--CDIVV 97 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G---~~V~~~d~~~~~~~~-~~~~------g~~~-------~~~l~ell~~--aDvVv 97 (221)
++|+|+|.|.||+.+++.|...| .+|.+++++....+. +... .+.. .+++++++++ +|+|+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi 81 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL 81 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence 58999999999999999998887 389999987533222 1111 1211 1345667776 89999
Q ss_pred EeCCCChhhhhcchHHHHhcCCCCCEEEEcCCC
Q 027577 98 VNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 98 ~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg 130 (221)
.++|... ..-+.. ..++.|..+++++--
T Consensus 82 n~ag~~~--~~~v~~---a~l~~g~~vvD~a~~ 109 (405)
T 4ina_A 82 NIALPYQ--DLTIME---ACLRTGVPYLDTANY 109 (405)
T ss_dssp ECSCGGG--HHHHHH---HHHHHTCCEEESSCC
T ss_pred ECCCccc--ChHHHH---HHHHhCCCEEEecCC
Confidence 9987321 111222 223456677776543
No 344
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=97.38 E-value=0.00019 Score=62.23 Aligned_cols=89 Identities=15% Similarity=0.045 Sum_probs=63.3
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHhh----c--CCCCEEEEeCCCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTM----L--PKCDIVVVNTPLT 103 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~el----l--~~aDvVv~~~p~~ 103 (221)
.|++|.|+|.|.+|...++.++..|++|++.++++...+.++++|+..+ .++.+. . ...|+|+-++. .
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g-~ 267 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAG-G 267 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEETT-S
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC-h
Confidence 5899999999999999999999999999999987655666777776422 122221 1 15788887776 1
Q ss_pred hhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 104 EKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
+ .-...++.++++..++.++.
T Consensus 268 ~-----~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 268 A-----GLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp S-----CHHHHHHHEEEEEEEEEECC
T ss_pred H-----HHHHHHHHhhcCCEEEEEec
Confidence 1 22445667777777777653
No 345
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=97.37 E-value=0.0017 Score=57.89 Aligned_cols=108 Identities=16% Similarity=0.233 Sum_probs=69.8
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCCeEE-EEcCC-------CCChhHHH----hcC-------ceecCCHHhhc-C
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRV-------KMDPQLEK----ETG-------AKFEEDLDTML-P 91 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~-~~d~~-------~~~~~~~~----~~g-------~~~~~~l~ell-~ 91 (221)
.++.|+||.|.|+|++|+.+|+.|...|.+|+ +.|.+ ....+... +.+ .+.+ +.++++ .
T Consensus 231 ~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i-~~~ei~~~ 309 (440)
T 3aog_A 231 LQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPL-PAADFWGL 309 (440)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEEC-CHHHHTTC
T ss_pred CCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEc-CchhhhcC
Confidence 46899999999999999999999999999988 44442 11222111 111 2333 455665 3
Q ss_pred CCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 92 KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 92 ~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
+||+++-|.. .+.++.+....++ -.+|+-.+.+.+ ..++- +.|.+..+.
T Consensus 310 ~~DIlvPcA~-----~n~i~~~na~~l~-ak~VvEgAN~p~-t~eA~-~iL~~~GI~ 358 (440)
T 3aog_A 310 PVEFLVPAAL-----EKQITEQNAWRIR-ARIVAEGANGPT-TPAAD-DILLEKGVL 358 (440)
T ss_dssp CCSEEEECSS-----SSCBCTTTGGGCC-CSEEECCSSSCB-CHHHH-HHHHHHTCE
T ss_pred CCcEEEecCC-----cCccchhhHHHcC-CcEEEecCcccc-CHHHH-HHHHHCCCE
Confidence 7999999876 3445555556663 456666666665 44443 555555555
No 346
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=97.37 E-value=0.00041 Score=60.24 Aligned_cols=87 Identities=23% Similarity=0.261 Sum_probs=52.8
Q ss_pred CEEEEEc-cCHHHHHHHHHHccCC-CeEEEEc--CCCCChhHHH---------------hcCceecCCHHhhcC-CCCEE
Q 027577 37 KTVGTVG-CGRIGKLLLQRLKPFN-CNLLYHD--RVKMDPQLEK---------------ETGAKFEEDLDTMLP-KCDIV 96 (221)
Q Consensus 37 ~~vgIIG-~G~iG~~iA~~l~~~G-~~V~~~d--~~~~~~~~~~---------------~~g~~~~~~l~ell~-~aDvV 96 (221)
++|+|+| .|.+|+.+++.|.... ++|.++. +......... ...+.. .+++++++ .+|+|
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~DvV 87 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIP-TDPKHEEFEDVDIV 87 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEE-SCTTSGGGTTCCEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEe-CCHHHHhcCCCCEE
Confidence 5899999 8999999999997664 5776664 2221111111 111111 24566656 89999
Q ss_pred EEeCCCChhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 97 VVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 97 v~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
++|+|... ... +-. ..++.|+.+|+.+.
T Consensus 88 ~~atp~~~-~~~-~a~---~~~~aG~~VId~s~ 115 (354)
T 1ys4_A 88 FSALPSDL-AKK-FEP---EFAKEGKLIFSNAS 115 (354)
T ss_dssp EECCCHHH-HHH-HHH---HHHHTTCEEEECCS
T ss_pred EECCCchH-HHH-HHH---HHHHCCCEEEECCc
Confidence 99999321 111 112 22356888999874
No 347
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.37 E-value=0.00075 Score=57.66 Aligned_cols=98 Identities=23% Similarity=0.275 Sum_probs=62.5
Q ss_pred CEEEEEcc-CHHHHHHHHHHccCC--CeEEEEcCCCCChhHHHhc--C-----cee---cCCHHhhcCCCCEEEEeCCCC
Q 027577 37 KTVGTVGC-GRIGKLLLQRLKPFN--CNLLYHDRVKMDPQLEKET--G-----AKF---EEDLDTMLPKCDIVVVNTPLT 103 (221)
Q Consensus 37 ~~vgIIG~-G~iG~~iA~~l~~~G--~~V~~~d~~~~~~~~~~~~--g-----~~~---~~~l~ell~~aDvVv~~~p~~ 103 (221)
+||+|||. |.+|..++..|...| .+|..+|+.+ ....+.++ . +.. ..++++.+++||+|+++....
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~-~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~ 79 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVP 79 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS-HHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc-cHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcC
Confidence 58999998 999999999998777 5899999865 22221111 1 222 136788899999999987532
Q ss_pred hh---h-hhc------chH---HHHhcCCCCCEEEEcCCCCccCHHH
Q 027577 104 EK---T-RGM------FDK---DRIAKMKKGVLIVNNARGAIMDTQA 137 (221)
Q Consensus 104 ~~---t-~~~------i~~---~~~~~mk~ga~lIn~srg~~vd~~a 137 (221)
.. + ..+ +-. +.+....|++.+|++ ..++|.-.
T Consensus 80 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~--sNPv~~~~ 124 (314)
T 1mld_A 80 RKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII--SNPVNSTI 124 (314)
T ss_dssp CCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC--SSCHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE--CCCcchhH
Confidence 11 1 001 111 122333588999997 45666554
No 348
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=97.37 E-value=0.00023 Score=62.19 Aligned_cols=68 Identities=22% Similarity=0.347 Sum_probs=48.4
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhH--HHhcCceecCC---HHhhcCCCCEEEEe
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQL--EKETGAKFEED---LDTMLPKCDIVVVN 99 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~--~~~~g~~~~~~---l~ell~~aDvVv~~ 99 (221)
.-+.|+||+|+|.|.+|+.+++.++.+|++|+++|+.+..... +...-+..+.+ +.++++++|+|+..
T Consensus 10 ~~~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~~~ 82 (389)
T 3q2o_A 10 IILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTYE 82 (389)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCCEeeec
Confidence 3478999999999999999999999999999999976532211 11100011222 56778889998664
No 349
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=97.36 E-value=0.00022 Score=61.68 Aligned_cols=90 Identities=14% Similarity=0.172 Sum_probs=66.8
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHH-hcCceec---CC---HHhhcCCCCEEEEeCCCChhhh
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-ETGAKFE---ED---LDTMLPKCDIVVVNTPLTEKTR 107 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~~---~~---l~ell~~aDvVv~~~p~~~~t~ 107 (221)
.|.+|.|+|.|.+|...++.++.+|.+|++.++++...+.+. ++|...+ .+ +.++....|+|+-++....
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~~--- 256 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHH--- 256 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSCC---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCChH---
Confidence 689999999999999999999999999999998765555555 6775421 22 2233346899998886321
Q ss_pred hcchHHHHhcCCCCCEEEEcCC
Q 027577 108 GMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn~sr 129 (221)
.-...++.++++..++.++.
T Consensus 257 --~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 257 --ALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp --CSHHHHTTEEEEEEEEECSC
T ss_pred --HHHHHHHHhccCCEEEEeCC
Confidence 12446678899999998874
No 350
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=97.36 E-value=0.00018 Score=62.62 Aligned_cols=90 Identities=23% Similarity=0.275 Sum_probs=66.9
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhcCceec-----CCHHhhcC--------CCCEEEEeC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-----EDLDTMLP--------KCDIVVVNT 100 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell~--------~aDvVv~~~ 100 (221)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++...+.++++|+..+ .++.+.+. ..|+|+-++
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~ 261 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECA 261 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECC
Confidence 48999999999999999999999999 89999987666667777776532 23333332 479999887
Q ss_pred CCChhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 101 PLTEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 101 p~~~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
.. +. .-...+..++++..++.++-
T Consensus 262 G~-~~----~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 262 GV-AE----TVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp CC-HH----HHHHHHHHEEEEEEEEECSC
T ss_pred CC-HH----HHHHHHHHhccCCEEEEEec
Confidence 62 21 22456677889988888864
No 351
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=97.35 E-value=0.0011 Score=59.63 Aligned_cols=97 Identities=15% Similarity=0.079 Sum_probs=68.1
Q ss_pred CCCCCEEEEEccCH----------HHHHHHHHHccCCCeEEEEcCCCCChhHHHhc-------------CceecCCHHhh
Q 027577 33 DLEGKTVGTVGCGR----------IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET-------------GAKFEEDLDTM 89 (221)
Q Consensus 33 ~l~g~~vgIIG~G~----------iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~-------------g~~~~~~l~el 89 (221)
.+.|+||+|+|+.- -...+++.|...|.+|.+|||.....+..... ++....+..+.
T Consensus 326 ~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (467)
T 2q3e_A 326 TVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEA 405 (467)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHCC------CHHHHHEEECSSHHHH
T ss_pred ccCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHHHhhhhccccccccccccCceeecCCHHHH
Confidence 48899999999764 78889999999999999999964222211111 24455678889
Q ss_pred cCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCC
Q 027577 90 LPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGA 131 (221)
Q Consensus 90 l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~ 131 (221)
++.+|+|++++.-. +.+.+-.......|+...+|+|. |+-
T Consensus 406 ~~~ad~~vi~t~~~-~f~~~~~~~~~~~~~~~~~i~D~-r~~ 445 (467)
T 2q3e_A 406 CDGAHAVVICTEWD-MFKELDYERIHKKMLKPAFIFDG-RRV 445 (467)
T ss_dssp HTTCSEEEECSCCG-GGGGSCHHHHHHHSCSSCEEEES-SCT
T ss_pred HhCCcEEEEecCCh-hhhcCCHHHHHHhcCCCCEEEeC-CCc
Confidence 99999999999843 33333223445567776668886 543
No 352
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=97.35 E-value=0.00091 Score=58.15 Aligned_cols=97 Identities=18% Similarity=0.233 Sum_probs=71.4
Q ss_pred CCCCCEEEEEccC--HHHHHHHHHHccCCCeEEEEcCCCC-Ch-hH---H----HhcC--ceecCCHHhhcCCCCEEEEe
Q 027577 33 DLEGKTVGTVGCG--RIGKLLLQRLKPFNCNLLYHDRVKM-DP-QL---E----KETG--AKFEEDLDTMLPKCDIVVVN 99 (221)
Q Consensus 33 ~l~g~~vgIIG~G--~iG~~iA~~l~~~G~~V~~~d~~~~-~~-~~---~----~~~g--~~~~~~l~ell~~aDvVv~~ 99 (221)
.|.|.+|++||=| +++++++..+..+|++|.+..|... .. +. + ++.| +....+++++++++|+|..-
T Consensus 173 ~l~gl~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd 252 (359)
T 2w37_A 173 KLQGLTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTD 252 (359)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCeEEEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEEc
Confidence 5889999999975 9999999999999999999987542 11 12 1 1345 55578999999999999884
Q ss_pred CC----CC--hh-----hhhcchHHHHhcCC---CCCEEEEcCC
Q 027577 100 TP----LT--EK-----TRGMFDKDRIAKMK---KGVLIVNNAR 129 (221)
Q Consensus 100 ~p----~~--~~-----t~~~i~~~~~~~mk---~ga~lIn~sr 129 (221)
.= .. ++ ...-++.+.++..+ ++++|+.+.-
T Consensus 253 ~w~smg~ee~~er~~~~~~y~v~~ell~~ak~~~~dai~MHcLP 296 (359)
T 2w37_A 253 VWVSMGESNWEERVKELTPYQVNMEAMKKTGTPDDQLIFMHCLP 296 (359)
T ss_dssp CSCCTTCTTHHHHHHHHGGGCBCHHHHHTTCCCGGGCEEEECSC
T ss_pred ccccccccchHHHHHHhhccccCHHHHHhhCCCCCCEEEECCCC
Confidence 42 00 11 12346778888888 8888888754
No 353
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.35 E-value=0.00049 Score=58.24 Aligned_cols=89 Identities=13% Similarity=0.188 Sum_probs=59.7
Q ss_pred CEEEEEc-cCHHHHHHHHHHc-cCCCeEE-EEcCCCCC---hh--HH---HhcCceecCCHHhhcCCCCEEEEeCCCChh
Q 027577 37 KTVGTVG-CGRIGKLLLQRLK-PFNCNLL-YHDRVKMD---PQ--LE---KETGAKFEEDLDTMLPKCDIVVVNTPLTEK 105 (221)
Q Consensus 37 ~~vgIIG-~G~iG~~iA~~l~-~~G~~V~-~~d~~~~~---~~--~~---~~~g~~~~~~l~ell~~aDvVv~~~p~~~~ 105 (221)
.||+|+| +|+||+.+++.+. .-++++. ++|++... .+ .. ...|+..+.++++++.++|+|+-+++ |+
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT~--p~ 99 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQ--PQ 99 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECSC--HH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcCC--HH
Confidence 5899999 9999999999886 4578855 55775321 01 11 12466677899999999999997775 33
Q ss_pred hhhcchHHHHhcCCCCCEEEEcCCC
Q 027577 106 TRGMFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 106 t~~~i~~~~~~~mk~ga~lIn~srg 130 (221)
. ........++.|.-+|-.+.|
T Consensus 100 a---~~~~~~~~l~~Gv~vViGTTG 121 (288)
T 3ijp_A 100 A---SVLYANYAAQKSLIHIIGTTG 121 (288)
T ss_dssp H---HHHHHHHHHHHTCEEEECCCC
T ss_pred H---HHHHHHHHHHcCCCEEEECCC
Confidence 2 111222335567777776666
No 354
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=97.35 E-value=0.00027 Score=59.99 Aligned_cols=105 Identities=14% Similarity=0.107 Sum_probs=68.4
Q ss_pred CCEEEEEcc-CHHHHHHHHHHccCCCe-EEEEcCCCCChhHHHhcCceecCCHHhhcC--CCCEEEEeCCCChhhhhcch
Q 027577 36 GKTVGTVGC-GRIGKLLLQRLKPFNCN-LLYHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGMFD 111 (221)
Q Consensus 36 g~~vgIIG~-G~iG~~iA~~l~~~G~~-V~~~d~~~~~~~~~~~~g~~~~~~l~ell~--~aDvVv~~~p~~~~t~~~i~ 111 (221)
..++.|+|. |++|+.+++.+...|++ |..+++.....+ -.|+..+.+++++.+ .+|++++++| ++...-+-
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~g~~---i~G~~vy~sl~el~~~~~~Dv~ii~vp--~~~~~~~v 87 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQN---VHGVPVFDTVKEAVKETDANASVIFVP--APFAKDAV 87 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCTTCE---ETTEEEESSHHHHHHHHCCCEEEECCC--HHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCCCce---ECCEeeeCCHHHHhhcCCCCEEEEccC--HHHHHHHH
Confidence 345788898 99999999999988998 335555321111 247787889999998 8999999999 33222222
Q ss_pred HHHHhcCCCCCE-EEEcCCCC-ccCHHHHHHHHHhCCce
Q 027577 112 KDRIAKMKKGVL-IVNNARGA-IMDTQAVVDACSSGHIA 148 (221)
Q Consensus 112 ~~~~~~mk~ga~-lIn~srg~-~vd~~al~~al~~g~i~ 148 (221)
.+..+ .|.- +|..+.|= ..+++.+.++.++..+.
T Consensus 88 ~ea~~---~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~ 123 (294)
T 2yv1_A 88 FEAID---AGIELIVVITEHIPVHDTMEFVNYAEDVGVK 123 (294)
T ss_dssp HHHHH---TTCSEEEECCSCCCHHHHHHHHHHHHHHTCE
T ss_pred HHHHH---CCCCEEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 22332 3333 55555552 23456788888876665
No 355
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=97.34 E-value=0.00015 Score=62.06 Aligned_cols=90 Identities=20% Similarity=0.207 Sum_probs=66.3
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHhhc----CCCCEEEEeCCCChh
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTML----PKCDIVVVNTPLTEK 105 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell----~~aDvVv~~~p~~~~ 105 (221)
.|++|.|+|.|.+|...++.++..|.+|++.++++...+.++++|...+ .++.+.+ ...|+|+.++...+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~- 244 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPK- 244 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHH-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHH-
Confidence 5889999999999999999999999999999987766677777776432 1222222 25788888875221
Q ss_pred hhhcchHHHHhcCCCCCEEEEcCC
Q 027577 106 TRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 106 t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
.-...+..++++..++.++-
T Consensus 245 ----~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 245 ----AFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp ----HHHHHHHHEEEEEEEEECSC
T ss_pred ----HHHHHHHHhccCCEEEEeCC
Confidence 22456677888888888764
No 356
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=97.33 E-value=0.00031 Score=62.88 Aligned_cols=116 Identities=15% Similarity=0.182 Sum_probs=73.8
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCC--C--hhHHHhcCceec--CCHHhhcCC-CCEEEEeCCC--
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKM--D--PQLEKETGAKFE--EDLDTMLPK-CDIVVVNTPL-- 102 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~--~--~~~~~~~g~~~~--~~l~ell~~-aDvVv~~~p~-- 102 (221)
.++.||+|.|||+|..|.++|+.|+..|++|.++|.... . .+.+++.|+... ...++++.+ +|+|+++...
T Consensus 5 ~~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi~~ 84 (451)
T 3lk7_A 5 TTFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPY 84 (451)
T ss_dssp CTTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTSCT
T ss_pred hhcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcCCC
Confidence 357899999999999999999999999999999998542 1 123455676542 233456666 8999886432
Q ss_pred -Chhh-----h--hcchH-HHHhcCCCCC-EEEEcCCCCccCHHHHHHHHHhCCc
Q 027577 103 -TEKT-----R--GMFDK-DRIAKMKKGV-LIVNNARGAIMDTQAVVDACSSGHI 147 (221)
Q Consensus 103 -~~~t-----~--~~i~~-~~~~~mk~ga-~lIn~srg~~vd~~al~~al~~g~i 147 (221)
+|.. . .++.+ +.+..+.+.. +-|.-+.|+--...-+...|+....
T Consensus 85 ~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~ 139 (451)
T 3lk7_A 85 NNPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGGQ 139 (451)
T ss_dssp TSHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTTC
T ss_pred CChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcCC
Confidence 2221 1 12322 3333333333 3344557776666666677776543
No 357
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.33 E-value=0.00045 Score=57.07 Aligned_cols=66 Identities=18% Similarity=0.215 Sum_probs=49.9
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec----CCHHhhcCCCCEEEEeCCCC
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----EDLDTMLPKCDIVVVNTPLT 103 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~----~~l~ell~~aDvVv~~~p~~ 103 (221)
.++|.|.|.|.||+.+++.|...|++|++.+|+..........+++.+ .+++ +..+|+|+.+....
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAPD 74 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCCB
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc--cCCCCEEEECCCcc
Confidence 479999999999999999999999999999997644443333444321 2333 78899999887643
No 358
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=97.32 E-value=0.0015 Score=56.15 Aligned_cols=96 Identities=17% Similarity=0.104 Sum_probs=69.1
Q ss_pred CCCCCEEEEEcc--CHHHHHHHHHHccCCCeEEEEcCCCCC---hh-H---HH----h--cC--ceecCCHHhhcCCCCE
Q 027577 33 DLEGKTVGTVGC--GRIGKLLLQRLKPFNCNLLYHDRVKMD---PQ-L---EK----E--TG--AKFEEDLDTMLPKCDI 95 (221)
Q Consensus 33 ~l~g~~vgIIG~--G~iG~~iA~~l~~~G~~V~~~d~~~~~---~~-~---~~----~--~g--~~~~~~l~ell~~aDv 95 (221)
.+.|.||++||= .++.++++..+..+|++|.+..|.... .+ . ++ + .| +....+++++++++|+
T Consensus 158 ~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDv 237 (328)
T 3grf_A 158 GFKGIKFAYCGDSMNNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDV 237 (328)
T ss_dssp TGGGCCEEEESCCSSHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSE
T ss_pred ccCCcEEEEeCCCCcchHHHHHHHHHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEcCHHHHhcCCCE
Confidence 588999999995 499999999999999999999875422 11 1 11 1 34 4556899999999999
Q ss_pred EEEe----CC-CCh---h-----hhhcchHHHHhcCCCCCEEEEcC
Q 027577 96 VVVN----TP-LTE---K-----TRGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 96 Vv~~----~p-~~~---~-----t~~~i~~~~~~~mk~ga~lIn~s 128 (221)
|..- +. ..+ + ...-++.+.++.+|++++|+.+.
T Consensus 238 vytd~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~~ai~mH~l 283 (328)
T 3grf_A 238 VYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCL 283 (328)
T ss_dssp EEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEECS
T ss_pred EEecCccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCCCCEEECCC
Confidence 9863 22 111 0 12346888888899999998864
No 359
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=97.31 E-value=0.00037 Score=59.89 Aligned_cols=91 Identities=16% Similarity=0.106 Sum_probs=66.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec------CCHHhhcC-----CCCEEEEeCCC
Q 027577 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE------EDLDTMLP-----KCDIVVVNTPL 102 (221)
Q Consensus 35 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~------~~l~ell~-----~aDvVv~~~p~ 102 (221)
.|++|.|+|. |.||..+++.++..|++|++.++++...+.+++.|.... .++.+.+. ..|+|+.++..
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVS 248 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCc
Confidence 4899999998 899999999999999999999987665566666665321 23333332 47999888762
Q ss_pred ChhhhhcchHHHHhcCCCCCEEEEcCCC
Q 027577 103 TEKTRGMFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~lIn~srg 130 (221)
.+ .....+..|+++..+|+++..
T Consensus 249 ~~-----~~~~~~~~l~~~G~iv~~g~~ 271 (347)
T 2hcy_A 249 EA-----AIEASTRYVRANGTTVLVGMP 271 (347)
T ss_dssp HH-----HHHHHTTSEEEEEEEEECCCC
T ss_pred HH-----HHHHHHHHHhcCCEEEEEeCC
Confidence 12 224567788888899988753
No 360
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=97.31 E-value=0.001 Score=56.86 Aligned_cols=111 Identities=14% Similarity=0.052 Sum_probs=71.9
Q ss_pred CCEEEEEccCHHHHH-HHHHHccCCCeEEEEcCCCCC--hhHHHhcCceec--CCHHhhc-CCCCEEEEeC--C-CChhh
Q 027577 36 GKTVGTVGCGRIGKL-LLQRLKPFNCNLLYHDRVKMD--PQLEKETGAKFE--EDLDTML-PKCDIVVVNT--P-LTEKT 106 (221)
Q Consensus 36 g~~vgIIG~G~iG~~-iA~~l~~~G~~V~~~d~~~~~--~~~~~~~g~~~~--~~l~ell-~~aDvVv~~~--p-~~~~t 106 (221)
.|+|.|||.|.+|.+ +|+.|+..|++|.++|.+... .+.+++.|+... .+.+++. .++|+|+... | .+|..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCCTTCHHH
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcCCCCHHH
Confidence 579999999999996 999999999999999986532 234455677543 3445555 5799998863 2 23322
Q ss_pred h-------hcch-HHHHhc--CCCC-CEEEEcCCCCccCHHHHHHHHHhCC
Q 027577 107 R-------GMFD-KDRIAK--MKKG-VLIVNNARGAIMDTQAVVDACSSGH 146 (221)
Q Consensus 107 ~-------~~i~-~~~~~~--mk~g-a~lIn~srg~~vd~~al~~al~~g~ 146 (221)
. .++. .+.+.. ++.. .+-|--+.|+--...-+...|+...
T Consensus 84 ~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g 134 (326)
T 3eag_A 84 EAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAG 134 (326)
T ss_dssp HHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcC
Confidence 1 1232 233332 2322 3445556788777777777777644
No 361
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=97.31 E-value=0.00022 Score=59.86 Aligned_cols=38 Identities=16% Similarity=0.154 Sum_probs=34.8
Q ss_pred cCCCCCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCC
Q 027577 32 YDLEGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVK 69 (221)
Q Consensus 32 ~~l~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~ 69 (221)
.++.|+++.|+| .|.+|+++++.|...|++|++++|+.
T Consensus 115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 457899999999 99999999999999999999999864
No 362
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=97.31 E-value=0.0015 Score=58.74 Aligned_cols=111 Identities=20% Similarity=0.267 Sum_probs=67.6
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccCCCeEE-EEc-------CCCCChhHH------Hhc-------------Cceec
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLL-YHD-------RVKMDPQLE------KET-------------GAKFE 83 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~-~~d-------~~~~~~~~~------~~~-------------g~~~~ 83 (221)
+.+|.|+||.|-|+|++|...|+.|...|.+|+ +.| +.....+.. +.. +.+.+
T Consensus 247 G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v 326 (470)
T 2bma_A 247 NIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYF 326 (470)
T ss_dssp TCCGGGCEEEEECSSHHHHHHHHHHHHTTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEEC
T ss_pred cCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEe
Confidence 346899999999999999999999999999987 344 322211110 000 22333
Q ss_pred CCHHhhc-CCCCEEEEeCCCChhhhhcchHHHHhcC-CCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 84 EDLDTML-PKCDIVVVNTPLTEKTRGMFDKDRIAKM-KKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 84 ~~l~ell-~~aDvVv~~~p~~~~t~~~i~~~~~~~m-k~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
+ .++++ ..||+.+-|.. .+.|+.+....+ +.++.+|--+.-..+..+| .+.|.+..|.
T Consensus 327 ~-~~~~~~~~~DI~iPcA~-----~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA-~~~L~~rGIl 386 (470)
T 2bma_A 327 P-NEKPWGVPCTLAFPCAT-----QNDVDLDQAKLLQKNGCILVGEGANMPSTVDA-INLFKSNNII 386 (470)
T ss_dssp S-SCCTTSSCCSEEEECSS-----TTCBCSHHHHHHHHTTCCEEECCSSSCBCHHH-HHHHHHTTCE
T ss_pred c-CcCeeecCccEEEeccc-----cCcCCHHHHHHHHhcCcEEEEeCCCCCCCHHH-HHHHHHCCcE
Confidence 2 12333 47999988874 345655544444 2334444444444456666 6777777776
No 363
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=97.30 E-value=0.00033 Score=59.72 Aligned_cols=95 Identities=19% Similarity=0.255 Sum_probs=59.6
Q ss_pred EEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhH-----HHh---c--C--ceecCCHHhhcCCCCEEEEeCCCCh
Q 027577 38 TVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQL-----EKE---T--G--AKFEEDLDTMLPKCDIVVVNTPLTE 104 (221)
Q Consensus 38 ~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~-----~~~---~--g--~~~~~~l~ell~~aDvVv~~~p~~~ 104 (221)
||+|||.|.||..++..+...|+ +|..+|.+....+. .+. . . +....+. +.+++||+|+++.+...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~~ 79 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIGR 79 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCCC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCCC
Confidence 58999999999999998876676 69999987543221 111 1 2 2333465 67899999999976332
Q ss_pred h-----------hhhcchH--HHHhcCCCCCEEEEcCCCCccCH
Q 027577 105 K-----------TRGMFDK--DRIAKMKKGVLIVNNARGAIMDT 135 (221)
Q Consensus 105 ~-----------t~~~i~~--~~~~~mk~ga~lIn~srg~~vd~ 135 (221)
. +..++.. +.+....|++.+|+++- ++|.
T Consensus 80 k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN--Pv~~ 121 (308)
T 2d4a_B 80 KPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN--PVDA 121 (308)
T ss_dssp CSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS--SHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC--chHH
Confidence 1 1111110 12233358999999743 5553
No 364
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=97.29 E-value=0.00021 Score=61.76 Aligned_cols=67 Identities=22% Similarity=0.289 Sum_probs=43.8
Q ss_pred CEEEEEccCHHHHHHHHHHcc-CCCeEEEE-cCCCCChh-HHHhc------------------CceecCCHHhhcCCCCE
Q 027577 37 KTVGTVGCGRIGKLLLQRLKP-FNCNLLYH-DRVKMDPQ-LEKET------------------GAKFEEDLDTMLPKCDI 95 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~-~G~~V~~~-d~~~~~~~-~~~~~------------------g~~~~~~l~ell~~aDv 95 (221)
.+|||+|+|.||+.+++.|.. -++++.+. |+++.... .+... ++....+.++++.++|+
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vDv 81 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI 81 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCCE
Confidence 379999999999999999876 46776554 55432111 11111 11111256677789999
Q ss_pred EEEeCCCC
Q 027577 96 VVVNTPLT 103 (221)
Q Consensus 96 Vv~~~p~~ 103 (221)
|+.|+|..
T Consensus 82 V~~atp~~ 89 (337)
T 1cf2_P 82 VIDCTPEG 89 (337)
T ss_dssp EEECCSTT
T ss_pred EEECCCch
Confidence 99999943
No 365
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=97.28 E-value=0.00096 Score=57.77 Aligned_cols=86 Identities=17% Similarity=0.099 Sum_probs=53.2
Q ss_pred CEEEEEc-cCHHHHHHHHHHccCC-CeEEEEcCCCCCh-hHHH------h-cCceecCCHHhhcCCCCEEEEeCCCChhh
Q 027577 37 KTVGTVG-CGRIGKLLLQRLKPFN-CNLLYHDRVKMDP-QLEK------E-TGAKFEEDLDTMLPKCDIVVVNTPLTEKT 106 (221)
Q Consensus 37 ~~vgIIG-~G~iG~~iA~~l~~~G-~~V~~~d~~~~~~-~~~~------~-~g~~~~~~l~ell~~aDvVv~~~p~~~~t 106 (221)
++|+|+| .|.||+.+++.|.... +++.++....... +... . .... +.++++ +..+|+|++|+|....
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~-~~~~~~-~~~vDvV~~a~g~~~s- 81 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLK-FVPPEK-LEPADILVLALPHGVF- 81 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCB-CBCGGG-CCCCSEEEECCCTTHH-
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCccccc-ccchhH-hcCCCEEEEcCCcHHH-
Confidence 5899999 7999999999997654 4766655432111 1111 0 1111 234444 5789999999994432
Q ss_pred hhcchHHHHhcCCCCCEEEEcCC
Q 027577 107 RGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 107 ~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
.. +-. ..++.|+.+|+.|.
T Consensus 82 ~~-~a~---~~~~aG~~VId~Sa 100 (345)
T 2ozp_A 82 AR-EFD---RYSALAPVLVDLSA 100 (345)
T ss_dssp HH-THH---HHHTTCSEEEECSS
T ss_pred HH-HHH---HHHHCCCEEEEcCc
Confidence 11 112 23467889999875
No 366
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=97.27 E-value=0.00077 Score=58.59 Aligned_cols=88 Identities=14% Similarity=0.078 Sum_probs=54.8
Q ss_pred CEEEEEc-cCHHHHHHHHHHccCC------CeEEEEc-CCCC-C-hhH----HH---hcCceecCCHHhhcCCCCEEEEe
Q 027577 37 KTVGTVG-CGRIGKLLLQRLKPFN------CNLLYHD-RVKM-D-PQL----EK---ETGAKFEEDLDTMLPKCDIVVVN 99 (221)
Q Consensus 37 ~~vgIIG-~G~iG~~iA~~l~~~G------~~V~~~d-~~~~-~-~~~----~~---~~g~~~~~~l~ell~~aDvVv~~ 99 (221)
++|+|+| .|.+|+.+.+.|...+ .++..+. ++.. . ... +. ...+... +.+ .+..+|+|++|
T Consensus 10 ~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~-~~~-~~~~~DvVf~a 87 (352)
T 2nqt_A 10 TKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPT-EAA-VLGGHDAVFLA 87 (352)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEEC-CHH-HHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccC-CHH-HhcCCCEEEEC
Confidence 6899999 9999999999998776 4666654 3221 1 110 11 1112222 333 35689999999
Q ss_pred CCCChhhhhcchHHHHhcCCCCCEEEEcCCCCc
Q 027577 100 TPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAI 132 (221)
Q Consensus 100 ~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~ 132 (221)
+|... ..+....++.|+.+|+.|..--
T Consensus 88 lg~~~------s~~~~~~~~~G~~vIDlSa~~R 114 (352)
T 2nqt_A 88 LPHGH------SAVLAQQLSPETLIIDCGADFR 114 (352)
T ss_dssp CTTSC------CHHHHHHSCTTSEEEECSSTTT
T ss_pred CCCcc------hHHHHHHHhCCCEEEEECCCcc
Confidence 99432 2333333367899999985443
No 367
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=97.27 E-value=0.00031 Score=54.83 Aligned_cols=67 Identities=19% Similarity=0.150 Sum_probs=48.1
Q ss_pred CCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCcee-------cCCHHhhcCCCCEEEEeCCC
Q 027577 36 GKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKF-------EEDLDTMLPKCDIVVVNTPL 102 (221)
Q Consensus 36 g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~-------~~~l~ell~~aDvVv~~~p~ 102 (221)
+|+|.|.|. |.||+.+++.|.+.|++|++.+|++.........++.. .++++++++.+|+|+.+...
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~ 77 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGT 77 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccC
Confidence 489999997 99999999999999999999998653221110112221 12455778899999988764
No 368
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.27 E-value=0.00038 Score=58.46 Aligned_cols=89 Identities=20% Similarity=0.331 Sum_probs=58.6
Q ss_pred CEEEEEc-cCHHHHHHHHHHcc-CCCeEEE-EcCCCCCh------hHH-HhcCceecCCHHhhcCCCCEEEEeCCCChhh
Q 027577 37 KTVGTVG-CGRIGKLLLQRLKP-FNCNLLY-HDRVKMDP------QLE-KETGAKFEEDLDTMLPKCDIVVVNTPLTEKT 106 (221)
Q Consensus 37 ~~vgIIG-~G~iG~~iA~~l~~-~G~~V~~-~d~~~~~~------~~~-~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t 106 (221)
.||+|+| +|.||+.+++.+.. -++++.+ +|++.... +.. ...++...++++++++++|+|+-+++ ++.
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~--p~a 85 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTL--PEG 85 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSC--HHH
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCC--HHH
Confidence 6899999 89999999998864 4778665 68753211 000 01156666899999999999998886 332
Q ss_pred hhcchHHHHhcCCCCCEEEEcCCC
Q 027577 107 RGMFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 107 ~~~i~~~~~~~mk~ga~lIn~srg 130 (221)
.. .-....++.|.-+|-.+.|
T Consensus 86 ~~---~~~~~al~~G~~vVigTTG 106 (272)
T 4f3y_A 86 TL---VHLDAALRHDVKLVIGTTG 106 (272)
T ss_dssp HH---HHHHHHHHHTCEEEECCCC
T ss_pred HH---HHHHHHHHcCCCEEEECCC
Confidence 11 1122234556677766666
No 369
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=97.25 E-value=0.00015 Score=57.03 Aligned_cols=89 Identities=12% Similarity=0.177 Sum_probs=56.1
Q ss_pred CCCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec-----CCH-H---hhc--CCCCEEEEeCCC
Q 027577 35 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDL-D---TML--PKCDIVVVNTPL 102 (221)
Q Consensus 35 ~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l-~---ell--~~aDvVv~~~p~ 102 (221)
.|++|.|+| .|.||..+++.++..|++|++.++++...+.+++.|.... .+. + +.. ...|+|+.+..
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g- 116 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLA- 116 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCC-
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCc-
Confidence 589999999 6999999999999999999999986543334444443211 111 1 111 13677766553
Q ss_pred ChhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 103 TEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
.. .....+..|+++..+|+++.
T Consensus 117 -~~----~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 117 -GE----AIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp -TH----HHHHHHHTEEEEEEEEECSC
T ss_pred -hH----HHHHHHHHhccCCEEEEEcC
Confidence 11 12345566677767776654
No 370
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=97.24 E-value=0.0012 Score=57.40 Aligned_cols=87 Identities=15% Similarity=0.217 Sum_probs=54.1
Q ss_pred CCEEEEEc-cCHHHHHHHHHHccCC-CeEEEEcCCCCC-hhHHHhc----Cc---e-ecCCHHhhcCCCCEEEEeCCCCh
Q 027577 36 GKTVGTVG-CGRIGKLLLQRLKPFN-CNLLYHDRVKMD-PQLEKET----GA---K-FEEDLDTMLPKCDIVVVNTPLTE 104 (221)
Q Consensus 36 g~~vgIIG-~G~iG~~iA~~l~~~G-~~V~~~d~~~~~-~~~~~~~----g~---~-~~~~l~ell~~aDvVv~~~p~~~ 104 (221)
..+|+|+| .|.+|+.+++.|.... +++.++...... ....... +. . .+.+ ++.++.+|+|++|+|...
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~atp~~~ 94 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCLPHGT 94 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEECCCTTT
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEcCCchh
Confidence 46899999 8999999999997765 477766543211 1111111 11 0 1122 455678999999998332
Q ss_pred hhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 105 KTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 105 ~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
. .+.....+.|+.+|+.+.
T Consensus 95 s------~~~a~~~~aG~~VId~sa 113 (359)
T 1xyg_A 95 T------QEIIKELPTALKIVDLSA 113 (359)
T ss_dssp H------HHHHHTSCTTCEEEECSS
T ss_pred H------HHHHHHHhCCCEEEECCc
Confidence 2 222222277899999885
No 371
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=97.24 E-value=0.00053 Score=61.00 Aligned_cols=108 Identities=13% Similarity=0.222 Sum_probs=64.2
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCCeEE-EEcCCC------------CChhHH----HhcC-------ceecCCHH
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRVK------------MDPQLE----KETG-------AKFEEDLD 87 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~-~~d~~~------------~~~~~~----~~~g-------~~~~~~l~ 87 (221)
.++.|+||.|.|+|++|+.+|+.|...|.+|+ +.|.+. ...+.. .+.+ .+.+ +.+
T Consensus 208 ~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i-~~~ 286 (421)
T 2yfq_A 208 IKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERI-TDE 286 (421)
T ss_dssp CCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC--------------
T ss_pred CCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEe-Ccc
Confidence 46889999999999999999999999999988 445541 111111 1111 1222 223
Q ss_pred hhc-CCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 88 TML-PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 88 ell-~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
+++ .+||+++-|.. .+.++.+....+ ...+|+-.+.+.+- .++ .+.|.+..+.
T Consensus 287 ~~~~~~~DIliP~A~-----~n~i~~~~A~~l-~ak~VvEgAN~P~t-~ea-~~il~~~GI~ 340 (421)
T 2yfq_A 287 EFWTKEYDIIVPAAL-----ENVITGERAKTI-NAKLVCEAANGPTT-PEG-DKVLTERGIN 340 (421)
T ss_dssp --------CEEECSC-----SSCSCHHHHTTC-CCSEEECCSSSCSC-HHH-HHHHHHHTCE
T ss_pred chhcCCccEEEEcCC-----cCcCCcccHHHc-CCeEEEeCCccccC-HHH-HHHHHHCCCE
Confidence 444 36999998876 345777777777 35677777777753 443 3455555555
No 372
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=97.24 E-value=0.00019 Score=61.63 Aligned_cols=90 Identities=17% Similarity=0.152 Sum_probs=64.7
Q ss_pred CCCEEEEEccCHHHHHHHHHHccC--CCeEEEEcCCCCChhHHHhcCceecCCHH-------hhcC--CCCEEEEeCCCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPF--NCNLLYHDRVKMDPQLEKETGAKFEEDLD-------TMLP--KCDIVVVNTPLT 103 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~g~~~~~~l~-------ell~--~aDvVv~~~p~~ 103 (221)
.|++|.|+|.|.+|...++.++.+ |.+|++.++++...+.++++|...+-+.. ++-. ..|+|+-++..
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~- 248 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGT- 248 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCCC-
Confidence 689999999999999999999998 99999999876556667777764322221 1221 57888888762
Q ss_pred hhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 104 EKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
+. .-...++.++++..++.++.
T Consensus 249 ~~----~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 249 EE----TTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp HH----HHHHHHHHEEEEEEEEECCC
T ss_pred hH----HHHHHHHHhhcCCEEEEeCC
Confidence 21 12345677788888887753
No 373
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=97.24 E-value=0.00065 Score=57.97 Aligned_cols=97 Identities=15% Similarity=0.175 Sum_probs=59.9
Q ss_pred CEEEEEccCHHHHHHHHHHccCC--CeEEEEcCCCCChhH-HHhc--------CceecCCHHhhcCCCCEEEEeCCCChh
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPFN--CNLLYHDRVKMDPQL-EKET--------GAKFEEDLDTMLPKCDIVVVNTPLTEK 105 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~G--~~V~~~d~~~~~~~~-~~~~--------g~~~~~~l~ell~~aDvVv~~~p~~~~ 105 (221)
+||+|||.|.+|.+++..+...+ -++..+|......+. +.++ .+....+..+.+++||+|+++.+....
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~~~ 80 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVAQR 80 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCCCC
Confidence 58999999999999999987666 479999986422211 1111 112111336678999999998864321
Q ss_pred -----------hhhcchH--HHHhcCCCCCEEEEcCCCCccCH
Q 027577 106 -----------TRGMFDK--DRIAKMKKGVLIVNNARGAIMDT 135 (221)
Q Consensus 106 -----------t~~~i~~--~~~~~mk~ga~lIn~srg~~vd~ 135 (221)
+..++.. +.+....|+++++++ ..++|.
T Consensus 81 ~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~--tNPv~~ 121 (310)
T 2xxj_A 81 PGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVA--TNPVDV 121 (310)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC--SSSHHH
T ss_pred CCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEe--cCchHH
Confidence 0111110 122333789999997 445554
No 374
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=97.23 E-value=0.00088 Score=57.77 Aligned_cols=100 Identities=12% Similarity=0.191 Sum_probs=62.6
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCC--eEEEEcCCCCChh-----HHHh--c----CceecCCHHhhcCCCCEEEEe
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ-----LEKE--T----GAKFEEDLDTMLPKCDIVVVN 99 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~-----~~~~--~----g~~~~~~l~ell~~aDvVv~~ 99 (221)
....++|+|||.|.||..+|..+...|. ++..+|.+....+ .... . .+....+.+ .+++||+|+++
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~-~~~~aDiVvi~ 94 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS-VTANSKLVIIT 94 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG-GGTTEEEEEEC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH-HhCCCCEEEEc
Confidence 4567899999999999999998877776 8999998642111 1111 0 112234555 58999999998
Q ss_pred CCCCh---hhh-hcch--H-------HHHhcCCCCCEEEEcCCCCccCH
Q 027577 100 TPLTE---KTR-GMFD--K-------DRIAKMKKGVLIVNNARGAIMDT 135 (221)
Q Consensus 100 ~p~~~---~t~-~~i~--~-------~~~~~mk~ga~lIn~srg~~vd~ 135 (221)
..... .++ .++. . +.+....|++++++++ .++|.
T Consensus 95 aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt--NPvdi 141 (331)
T 4aj2_A 95 AGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS--NPVDI 141 (331)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS--SSHHH
T ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec--ChHHH
Confidence 64211 111 1111 1 1233447899999998 44543
No 375
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=97.22 E-value=0.0043 Score=55.03 Aligned_cols=108 Identities=17% Similarity=0.230 Sum_probs=71.2
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCCeEE-EEcCC-------CCChhHHH----hcC-ce--ecCCHHhhc-CCCCE
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRV-------KMDPQLEK----ETG-AK--FEEDLDTML-PKCDI 95 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~-~~d~~-------~~~~~~~~----~~g-~~--~~~~l~ell-~~aDv 95 (221)
.+|.|++|.|.|+|++|+.+|+.|...|.+|+ +.|.+ ....+... +.+ +. .. +.++++ -.||+
T Consensus 214 ~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~~~-~~~e~~~~~~DV 292 (419)
T 3aoe_E 214 LDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDL-APEEVFGLEAEV 292 (419)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCCCB-CTTTGGGSSCSE
T ss_pred CCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcceeec-cchhhhccCceE
Confidence 46899999999999999999999999999988 44542 22222211 222 11 11 223433 47999
Q ss_pred EEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 96 VVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 96 Vv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
++-|.. .+.++.+....++ =.+|+..+.+.+ ..++ .+.|.+..|.
T Consensus 293 liP~A~-----~n~i~~~~A~~l~-ak~V~EgAN~p~-t~~A-~~~L~~~Gi~ 337 (419)
T 3aoe_E 293 LVLAAR-----EGALDGDRARQVQ-AQAVVEVANFGL-NPEA-EAYLLGKGAL 337 (419)
T ss_dssp EEECSC-----TTCBCHHHHTTCC-CSEEEECSTTCB-CHHH-HHHHHHHTCE
T ss_pred EEeccc-----ccccccchHhhCC-ceEEEECCCCcC-CHHH-HHHHHHCCCE
Confidence 998875 4557777777774 357888887775 4444 3556666665
No 376
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=97.22 E-value=0.00045 Score=59.32 Aligned_cols=88 Identities=19% Similarity=0.184 Sum_probs=63.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec----CCHHhh----c--CCCCEEEEeCCCC
Q 027577 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----EDLDTM----L--PKCDIVVVNTPLT 103 (221)
Q Consensus 35 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~----~~l~el----l--~~aDvVv~~~p~~ 103 (221)
.|++|.|+|. |.||...++.++.+|++|++.+++....+.++++|...+ .++.+. . ...|+|+-++..
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~- 237 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGG- 237 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCch-
Confidence 5899999998 999999999999999999999987766677777775422 122222 2 147888887762
Q ss_pred hhhhhcchHHHHhcCCCCCEEEEcC
Q 027577 104 EKTRGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~lIn~s 128 (221)
+ .....+..++++..++.++
T Consensus 238 ~-----~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 238 P-----AFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp ------CHHHHHHTEEEEEEEEEC-
T ss_pred h-----HHHHHHHhhcCCCEEEEEE
Confidence 1 2345667788888888775
No 377
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=97.22 E-value=0.00046 Score=59.11 Aligned_cols=89 Identities=15% Similarity=0.125 Sum_probs=65.7
Q ss_pred CCCEEEEEccC-HHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHhh----c--CCCCEEEEeCCC
Q 027577 35 EGKTVGTVGCG-RIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTM----L--PKCDIVVVNTPL 102 (221)
Q Consensus 35 ~g~~vgIIG~G-~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~el----l--~~aDvVv~~~p~ 102 (221)
.|++|.|+|.| .||...++.++..|++|++.+++....+.++++|...+ .++.+. . ...|+|+-++..
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 223 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGG 223 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCC
Confidence 58999999987 99999999999999999999988877777777776422 122222 1 258999888762
Q ss_pred ChhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 103 TEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
+.+ .+.+..++++..++.++-
T Consensus 224 -~~~-----~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 224 -PDG-----NELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp -HHH-----HHHHHTEEEEEEEEECCC
T ss_pred -hhH-----HHHHHHhcCCCEEEEEee
Confidence 211 234577888888888864
No 378
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=97.21 E-value=0.00053 Score=59.77 Aligned_cols=67 Identities=22% Similarity=0.348 Sum_probs=47.2
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhH--HHhcCceecC---CHHhhcCCCCEEEEe
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQL--EKETGAKFEE---DLDTMLPKCDIVVVN 99 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~--~~~~g~~~~~---~l~ell~~aDvVv~~ 99 (221)
.+.+++|+|+|.|.+|+.+++.++.+|++|+++|+.+..... +...-+.... .+.++++++|+|+..
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~~~~~dvi~~~ 80 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITYE 80 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGSSEEEECCTTCHHHHHHHHHHCSEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhhCCEEEECCCCCHHHHHHHHHhCCcceec
Confidence 467999999999999999999999999999999986543211 1110000112 245667789988663
No 379
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=97.20 E-value=0.00064 Score=58.91 Aligned_cols=68 Identities=21% Similarity=0.288 Sum_probs=49.6
Q ss_pred CCCCEEEEEcc-CHHHHHHHHHHccCCC--eEEEEcCCCCChh-----HHHh----cCceecCCHHhhcCCCCEEEEeCC
Q 027577 34 LEGKTVGTVGC-GRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ-----LEKE----TGAKFEEDLDTMLPKCDIVVVNTP 101 (221)
Q Consensus 34 l~g~~vgIIG~-G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~-----~~~~----~g~~~~~~l~ell~~aDvVv~~~p 101 (221)
+.++||+|||. |.+|..+|..+...|. +|..+|......+ .... ..+....++.+.+++||+|+++..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 45789999997 9999999998887774 7999998542211 1111 123334678888999999999864
No 380
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=97.16 E-value=0.00026 Score=60.98 Aligned_cols=89 Identities=20% Similarity=0.157 Sum_probs=64.0
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhcCceec-----CCHHh----hcC--CCCEEEEeCCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-----EDLDT----MLP--KCDIVVVNTPL 102 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e----ll~--~aDvVv~~~p~ 102 (221)
.|.+|.|+|.|.+|...++.++..|. +|++.++++...+.++++|+..+ .++.+ +.. ..|+|+-++..
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g~ 245 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGGD 245 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 48899999999999999999999999 79999987655667777776432 12222 221 47888887762
Q ss_pred ChhhhhcchHHHHhcCCCCCEEEEcC
Q 027577 103 TEKTRGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~lIn~s 128 (221)
.+ .-...+..++++..++.++
T Consensus 246 ~~-----~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 246 VH-----TFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp TT-----HHHHHHHHEEEEEEEEECC
T ss_pred hH-----HHHHHHHHHhcCCEEEEec
Confidence 21 2244566788888888775
No 381
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=97.16 E-value=0.0022 Score=56.91 Aligned_cols=109 Identities=15% Similarity=0.270 Sum_probs=72.1
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccCCCeEE-EEcCC-------CCChhHHHhc----C------ceecCCHHhhc-C
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRV-------KMDPQLEKET----G------AKFEEDLDTML-P 91 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~-~~d~~-------~~~~~~~~~~----g------~~~~~~l~ell-~ 91 (221)
+.++.|+||.|.|+|++|+..|+.|...|.+|+ +.|.+ ....+...+. + .+.+ +.++++ .
T Consensus 216 g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~~~-~~~~i~~~ 294 (424)
T 3k92_A 216 GIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTDVI-TNEELLEK 294 (424)
T ss_dssp TCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSCCB-CHHHHHHS
T ss_pred CCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcEEe-cCccceec
Confidence 457899999999999999999999999999975 44543 1122222211 1 2222 345544 5
Q ss_pred CCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 92 KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 92 ~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
+||+++-|.. .+.|+.+....++ -.+|+-.+.+.+ ..+ ..+.|.+..|.
T Consensus 295 ~~DIliPcA~-----~n~I~~~~a~~l~-ak~V~EgAN~p~-t~e-A~~iL~~rGI~ 343 (424)
T 3k92_A 295 DCDILVPAAI-----SNQITAKNAHNIQ-ASIVVERANGPT-TID-ATKILNERGVL 343 (424)
T ss_dssp CCSEEEECSC-----SSCBCTTTGGGCC-CSEEECCSSSCB-CHH-HHHHHHHTTCE
T ss_pred cccEEeecCc-----ccccChhhHhhcC-ceEEEcCCCCCC-CHH-HHHHHHHCCCE
Confidence 7999998876 3567666666663 456666677764 443 45667777665
No 382
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=97.16 E-value=0.00044 Score=58.52 Aligned_cols=87 Identities=15% Similarity=0.158 Sum_probs=63.7
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec-CCHHhhcCCCCEEEEeCCCChhhhhcchHH
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-EDLDTMLPKCDIVVVNTPLTEKTRGMFDKD 113 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~~l~ell~~aDvVv~~~p~~~~t~~~i~~~ 113 (221)
.|++|.|+|.|.+|...++.++..|++|++.+ ++...+.++++|+..+ .+.+++-...|+|+-++.. +.. ..
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v~~g~Dvv~d~~g~-~~~-----~~ 214 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYREPSQVTQKYFAIFDAVNS-QNA-----AA 214 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEESSGGGCCSCEEEEECC-------------T
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEcCHHHhCCCccEEEECCCc-hhH-----HH
Confidence 58999999999999999999999999999999 7777888888887543 2333333468888887762 211 34
Q ss_pred HHhcCCCCCEEEEcC
Q 027577 114 RIAKMKKGVLIVNNA 128 (221)
Q Consensus 114 ~~~~mk~ga~lIn~s 128 (221)
.++.++++..++.++
T Consensus 215 ~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 215 LVPSLKANGHIICIQ 229 (315)
T ss_dssp TGGGEEEEEEEEEEC
T ss_pred HHHHhcCCCEEEEEe
Confidence 567788888888874
No 383
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=97.16 E-value=0.00033 Score=59.70 Aligned_cols=89 Identities=20% Similarity=0.157 Sum_probs=61.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec------CCHHhhc-----CCCCEEEEeCCC
Q 027577 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE------EDLDTML-----PKCDIVVVNTPL 102 (221)
Q Consensus 35 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~------~~l~ell-----~~aDvVv~~~p~ 102 (221)
.|++|.|.|. |.||..+++.++..|++|++.+++....+.+++.|.... .++.+.+ ...|+++.++..
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 224 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGG 224 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCCh
Confidence 5899999997 999999999999999999999986544444555554211 2222222 146888777751
Q ss_pred ChhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 103 TEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
. .....+..++++..++.++-
T Consensus 225 --~----~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 225 --E----FLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp --H----HHHHHHTTEEEEEEEEECCC
T ss_pred --H----HHHHHHHHHhcCCEEEEEec
Confidence 1 12456677788888887763
No 384
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=97.15 E-value=0.00069 Score=57.51 Aligned_cols=105 Identities=15% Similarity=0.164 Sum_probs=67.6
Q ss_pred CCEEEEEcc-CHHHHHHHHHHccCCCe-EEEEcCCCCChhHHHhcCceecCCHHhhcC--C-CCEEEEeCCCChhhhhcc
Q 027577 36 GKTVGTVGC-GRIGKLLLQRLKPFNCN-LLYHDRVKMDPQLEKETGAKFEEDLDTMLP--K-CDIVVVNTPLTEKTRGMF 110 (221)
Q Consensus 36 g~~vgIIG~-G~iG~~iA~~l~~~G~~-V~~~d~~~~~~~~~~~~g~~~~~~l~ell~--~-aDvVv~~~p~~~~t~~~i 110 (221)
..++.|+|. |++|+.+++.+...|++ |..+++.....+ ..|+..+.+++++.+ . +|++++++|. +.+...+
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~VnP~~~g~~---i~G~~vy~sl~el~~~~~~~DvaIi~vp~-~~~~~~v 88 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYGTKVVAGVTPGKGGSE---VHGVPVYDSVKEALAEHPEINTSIVFVPA-PFAPDAV 88 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCE---ETTEEEESSHHHHHHHCTTCCEEEECCCG-GGHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCCcEEEEeCCCCCCce---ECCEeeeCCHHHHhhcCCCCCEEEEecCH-HHHHHHH
Confidence 445777798 99999999999888998 345565321111 247887889999886 5 9999999992 2222222
Q ss_pred hHHHHhcCCCCCE-EEEcCCCCc-cCHHHHHHHHHhCCce
Q 027577 111 DKDRIAKMKKGVL-IVNNARGAI-MDTQAVVDACSSGHIA 148 (221)
Q Consensus 111 ~~~~~~~mk~ga~-lIn~srg~~-vd~~al~~al~~g~i~ 148 (221)
.+..+ .|.- +|..+.|=. .+++.+.++.++..+.
T Consensus 89 -~ea~~---~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~ 124 (297)
T 2yv2_A 89 -YEAVD---AGIRLVVVITEGIPVHDTMRFVNYARQKGAT 124 (297)
T ss_dssp -HHHHH---TTCSEEEECCCCCCHHHHHHHHHHHHHHTCE
T ss_pred -HHHHH---CCCCEEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 22222 2333 555555522 3456788888876664
No 385
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=97.15 E-value=0.00065 Score=58.59 Aligned_cols=91 Identities=12% Similarity=0.103 Sum_probs=64.3
Q ss_pred CCCCEEEEEccCHHHHHH-HHHH-ccCCCe-EEEEcCCCC---ChhHHHhcCceec----CCHHh---hcCCCCEEEEeC
Q 027577 34 LEGKTVGTVGCGRIGKLL-LQRL-KPFNCN-LLYHDRVKM---DPQLEKETGAKFE----EDLDT---MLPKCDIVVVNT 100 (221)
Q Consensus 34 l~g~~vgIIG~G~iG~~i-A~~l-~~~G~~-V~~~d~~~~---~~~~~~~~g~~~~----~~l~e---ll~~aDvVv~~~ 100 (221)
+.+++|.|+|.|.+|... ++.+ +.+|.+ |++.++++. ..+.++++|+..+ .++.+ +-...|+|+-++
T Consensus 171 ~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~i~~~~gg~Dvvid~~ 250 (357)
T 2b5w_A 171 WDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQMDFIYEAT 250 (357)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEEETTTSCGGGHHHHSCCEEEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCcccCCCccCHHHHHHhCCCCCEEEECC
Confidence 345899999999999999 9999 999998 999998776 5677778887543 11222 101478888777
Q ss_pred CCChhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 101 PLTEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 101 p~~~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
.. +. .-...++.++++..++.++.
T Consensus 251 g~-~~----~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 251 GF-PK----HAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp CC-HH----HHHHHHHHEEEEEEEEECCC
T ss_pred CC-hH----HHHHHHHHHhcCCEEEEEeC
Confidence 62 11 12345667788878877753
No 386
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.15 E-value=0.00026 Score=61.37 Aligned_cols=90 Identities=18% Similarity=0.125 Sum_probs=64.3
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhcCceec-----CCHHhhc----C-CCCEEEEeCCCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-----EDLDTML----P-KCDIVVVNTPLT 103 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell----~-~aDvVv~~~p~~ 103 (221)
.|++|.|+|.|.+|...++.++.+|. +|++.++++...+.++++|...+ .++.+.+ . ..|+|+-++..
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~- 268 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGS- 268 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECCCC-
Confidence 58899999999999999999999999 69999987656666777775421 1222222 1 47888888762
Q ss_pred hhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 104 EKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
+. .-...+..++++..++.++-
T Consensus 269 ~~----~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 269 PE----ILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp HH----HHHHHHHTEEEEEEEEECCC
T ss_pred HH----HHHHHHHHHhcCCEEEEeCC
Confidence 11 12456677888888888764
No 387
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=97.12 E-value=0.00094 Score=59.35 Aligned_cols=89 Identities=16% Similarity=0.073 Sum_probs=66.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCH------------------------H--
Q 027577 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDL------------------------D-- 87 (221)
Q Consensus 35 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l------------------------~-- 87 (221)
.|++|.|+|. |.||...++.++..|.+|++.+++....+.++++|...+-+. +
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 299 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLV 299 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHH
Confidence 5899999998 999999999999999999998876655666677776422111 1
Q ss_pred -hhc-CCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 88 -TML-PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 88 -ell-~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
++. ...|+|+-++.. . .....+..++++..+|+++.
T Consensus 300 ~~~~g~g~Dvvid~~G~--~----~~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 300 VEKAGREPDIVFEHTGR--V----TFGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHSSCCSEEEECSCH--H----HHHHHHHHSCTTCEEEESCC
T ss_pred HHHhCCCceEEEECCCc--h----HHHHHHHHHhcCCEEEEEec
Confidence 111 358999998862 1 22456778999999999874
No 388
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.12 E-value=0.00044 Score=62.20 Aligned_cols=69 Identities=16% Similarity=0.170 Sum_probs=50.4
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHH-HhcCceec----CC---HHhh-cCCCCEEEEeCCCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLE-KETGAKFE----ED---LDTM-LPKCDIVVVNTPLT 103 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~-~~~g~~~~----~~---l~el-l~~aDvVv~~~p~~ 103 (221)
..|+|-|+|+|.+|+.+|+.|...|++|.+.|.++...+.+ ..+++..+ .+ |+++ +++||+++.+++..
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~D 79 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTD 79 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCCh
Confidence 36799999999999999999999999999999875443333 23454322 12 3333 57899998887743
No 389
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.12 E-value=0.00046 Score=59.47 Aligned_cols=111 Identities=17% Similarity=0.178 Sum_probs=67.1
Q ss_pred CEEEEEccCHHHHHHHHHHccC--------CCeE-EEEcCCCCChhH-------HH---hcCce-ecC---CHHhhc-CC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF--------NCNL-LYHDRVKMDPQL-------EK---ETGAK-FEE---DLDTML-PK 92 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~--------G~~V-~~~d~~~~~~~~-------~~---~~g~~-~~~---~l~ell-~~ 92 (221)
.+|||||+|.||+.+++.+... +++| .++|++...... .. ..++. ..+ ++++++ .+
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~~~ 86 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEALARD 86 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHHHSS
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHhCCC
Confidence 4799999999999999988653 3565 456765421111 11 11221 233 788887 46
Q ss_pred CCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCcc-CHHHHHHHHHhCCce
Q 027577 93 CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIM-DTQAVVDACSSGHIA 148 (221)
Q Consensus 93 aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~v-d~~al~~al~~g~i~ 148 (221)
.|+|+.|+|.. .+.....+-....|+.|..+|......+. .-+.|.++.++.++.
T Consensus 87 iDvVv~~t~~~-~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv~ 142 (331)
T 3c8m_A 87 FDIVVDATPAS-ADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNRR 142 (331)
T ss_dssp CSEEEECSCCC-SSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCC
T ss_pred CCEEEECCCCC-CccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCCE
Confidence 89999999954 11111222344567788888876554432 335566666655544
No 390
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=97.12 E-value=0.00047 Score=61.89 Aligned_cols=67 Identities=19% Similarity=0.221 Sum_probs=46.8
Q ss_pred CCEEEEEccCHH-HHHHHHHHcc----C-CCeEEEEcCCC--CChhH----HH----hcC----ceecCCHHhhcCCCCE
Q 027577 36 GKTVGTVGCGRI-GKLLLQRLKP----F-NCNLLYHDRVK--MDPQL----EK----ETG----AKFEEDLDTMLPKCDI 95 (221)
Q Consensus 36 g~~vgIIG~G~i-G~~iA~~l~~----~-G~~V~~~d~~~--~~~~~----~~----~~g----~~~~~~l~ell~~aDv 95 (221)
.+||+|||.|.+ |.+++..|.. + +.+|..||+.+ ...+. .. ..+ +....++++.++.||+
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gAD~ 86 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADF 86 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCCCE
Confidence 468999999998 8887666544 2 55799999865 32211 11 111 2334688889999999
Q ss_pred EEEeCCC
Q 027577 96 VVVNTPL 102 (221)
Q Consensus 96 Vv~~~p~ 102 (221)
|++++|.
T Consensus 87 VVitagv 93 (450)
T 1s6y_A 87 VTTQFRV 93 (450)
T ss_dssp EEECCCT
T ss_pred EEEcCCC
Confidence 9999984
No 391
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=97.12 E-value=0.0017 Score=58.76 Aligned_cols=100 Identities=12% Similarity=0.206 Sum_probs=70.3
Q ss_pred ccCCCCCEEEEEccCH----------HHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeC
Q 027577 31 AYDLEGKTVGTVGCGR----------IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNT 100 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~----------iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~ 100 (221)
+..+.|++|+|+|+-- =...+++.|...|.+|.+|||.... .. .+....++++.++.+|+|++++
T Consensus 348 ~~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~---~~--~~~~~~~~~~~~~~ad~vvi~t 422 (478)
T 3g79_A 348 GKKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVN---YP--GVEISDNLEEVVRNADAIVVLA 422 (478)
T ss_dssp TCCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCC---BT--TBCEESCHHHHHTTCSEEEECS
T ss_pred ccCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCccc---cc--CcceecCHHHHHhcCCEEEEec
Confidence 3468999999999642 4678999999999999999986431 11 2334568999999999999999
Q ss_pred CCChhhhhcchHHHHhcCC-CCCEEEEcCCCCccCHHHH
Q 027577 101 PLTEKTRGMFDKDRIAKMK-KGVLIVNNARGAIMDTQAV 138 (221)
Q Consensus 101 p~~~~t~~~i~~~~~~~mk-~ga~lIn~srg~~vd~~al 138 (221)
+- ++.+.+--....+.|+ +..+|+|+ |+ +.|.+.+
T Consensus 423 ~~-~~f~~~d~~~~~~~~~~~~~~i~D~-rn-~~~~~~~ 458 (478)
T 3g79_A 423 GH-SAYSSLKADWAKKVSAKANPVIIDG-RN-VIEPDEF 458 (478)
T ss_dssp CC-HHHHSCCHHHHHHHHCCSSCEEEES-SS-CSCHHHH
T ss_pred CC-HHHHhhhHHHHHHHhccCCCEEEEC-CC-CCCHHHH
Confidence 73 3333332334455677 47899995 54 3454443
No 392
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=97.11 E-value=0.0011 Score=57.48 Aligned_cols=87 Identities=16% Similarity=0.117 Sum_probs=51.7
Q ss_pred CEEEEEccCHHHHHHHHHHccC-CCeEEEE-cCCCCChhH---------------------HHhcCceecCCHHhhcCCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF-NCNLLYH-DRVKMDPQL---------------------EKETGAKFEEDLDTMLPKC 93 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~-G~~V~~~-d~~~~~~~~---------------------~~~~g~~~~~~l~ell~~a 93 (221)
.+|||+|+|.||+.+++.+... +++|.++ |.++..... +...++....+.++++..+
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~~v 82 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIEDA 82 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGGGC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhccCC
Confidence 3899999999999999998765 5786655 432211110 1111111122455566789
Q ss_pred CEEEEeCCCChhhhhcchHHH-HhcCCCCCEEEEcC
Q 027577 94 DIVVVNTPLTEKTRGMFDKDR-IAKMKKGVLIVNNA 128 (221)
Q Consensus 94 DvVv~~~p~~~~t~~~i~~~~-~~~mk~ga~lIn~s 128 (221)
|+|+.|+|..... +.. -..++.|+.+|..+
T Consensus 83 DiV~eatg~~~s~-----~~a~~~~l~aG~~VI~sa 113 (343)
T 2yyy_A 83 DIVVDGAPKKIGK-----QNLENIYKPHKVKAILQG 113 (343)
T ss_dssp SEEEECCCTTHHH-----HHHHHTTTTTTCEEEECT
T ss_pred CEEEECCCccccH-----HHHHHHHHHCCCEEEECC
Confidence 9999999833211 111 24567777776544
No 393
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=97.10 E-value=0.003 Score=56.97 Aligned_cols=99 Identities=17% Similarity=0.149 Sum_probs=68.6
Q ss_pred CCCCCEEEEEccCH----------HHHHHHHHHccCCCeEEEEcCCCCChhHHHhc------------CceecCCHHhhc
Q 027577 33 DLEGKTVGTVGCGR----------IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET------------GAKFEEDLDTML 90 (221)
Q Consensus 33 ~l~g~~vgIIG~G~----------iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~------------g~~~~~~l~ell 90 (221)
.+.|++|+|+|+-- -...+++.|...|.+|.+|||.. ..+....+ .+....++++.+
T Consensus 325 ~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~g~~v~~~DP~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (478)
T 2y0c_A 325 DLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVA-QEEARRVIALDLADHPSWLERLSFVDDEAQAA 403 (478)
T ss_dssp CCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECTTT-HHHHHHHHHHHTTTCHHHHTTEEECSSHHHHT
T ss_pred cCCCCEEEEEecccCCCCCccccChHHHHHHHHHHCCCEEEEECCCc-cHHHHHhhccccccccccccceeecCCHHHHH
Confidence 68999999999642 57789999999999999999863 12211112 255667889999
Q ss_pred CCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHH
Q 027577 91 PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQ 136 (221)
Q Consensus 91 ~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~ 136 (221)
+.+|+|++++.-. +.+.+-.....+.|+ ..+|+|+ |+ +.+.+
T Consensus 404 ~~ad~~vi~t~~~-~f~~~~~~~~~~~~~-~~~i~D~-r~-~~~~~ 445 (478)
T 2y0c_A 404 RDADALVIVTEWK-IFKSPDFVALGRLWK-TPVIFDG-RN-LYEPE 445 (478)
T ss_dssp TTCSEEEECSCCG-GGGSCCHHHHHTTCS-SCEEEES-SC-CSCHH
T ss_pred hCCCEEEEecCCh-HhhccCHHHHHhhcC-CCEEEEC-CC-CCCHH
Confidence 9999999999843 333322233445565 4789987 43 34544
No 394
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=97.10 E-value=0.00035 Score=59.67 Aligned_cols=89 Identities=21% Similarity=0.172 Sum_probs=62.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhHH-HhcCceec-----CCHHhhc-----CCCCEEEEeCCC
Q 027577 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLE-KETGAKFE-----EDLDTML-----PKCDIVVVNTPL 102 (221)
Q Consensus 35 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~-~~~g~~~~-----~~l~ell-----~~aDvVv~~~p~ 102 (221)
.|++|.|+|. |.||..+++.++..|++|++.++++...+.+ +++|...+ .++.+.+ ...|+|+.++..
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 228 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGG 228 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCCc
Confidence 5899999998 9999999999999999999999876555555 56665321 1222222 247888877751
Q ss_pred ChhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 103 TEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
+ .....+..++++..++.++.
T Consensus 229 -~-----~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 229 -E-----ILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp -H-----HHHHHHTTEEEEEEEEECCC
T ss_pred -c-----hHHHHHHHHhhCCEEEEEee
Confidence 1 23456677888888887764
No 395
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=97.09 E-value=0.0017 Score=56.50 Aligned_cols=87 Identities=22% Similarity=0.296 Sum_probs=53.1
Q ss_pred CEEEEEccCHHHHHHHHHHccC-CCeEEEEcC-CCCChh---HH-H--h-c-------------------Cceec--CCH
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF-NCNLLYHDR-VKMDPQ---LE-K--E-T-------------------GAKFE--EDL 86 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~-G~~V~~~d~-~~~~~~---~~-~--~-~-------------------g~~~~--~~l 86 (221)
.+|||+|+|.||+.+.+.|... .++|.+.+. .. ..+ .. + + . .+... .++
T Consensus 18 ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~-~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~dp 96 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRACMERNDITVVAINDPFM-DVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKDP 96 (354)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTS-CHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSCG
T ss_pred eEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCC-ChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCCh
Confidence 4899999999999999998765 678776653 22 221 10 0 0 0 01111 144
Q ss_pred Hhhc---CCCCEEEEeCCCChhhhhcchHHHHhcCCCCC--EEEEcCC
Q 027577 87 DTML---PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGV--LIVNNAR 129 (221)
Q Consensus 87 ~ell---~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga--~lIn~sr 129 (221)
+++- ..+|+|+.|+|.... .+..-..++.|+ +||+.+.
T Consensus 97 ~~i~w~~~~vDvV~eatg~~~s-----~e~a~~~l~~GakkvVId~pa 139 (354)
T 3cps_A 97 AEIPWGASGAQIVCESTGVFTT-----EEKASLHLKGGAKKVIISAPP 139 (354)
T ss_dssp GGCCHHHHTCCEEEECSSSCCS-----HHHHGGGGTTTCSEEEESSCC
T ss_pred HHCCcccCCCCEEEECCCchhh-----HHHHHHHHHcCCcEEEEeCCC
Confidence 4432 479999999983221 122334466788 8888764
No 396
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=97.09 E-value=0.0056 Score=55.32 Aligned_cols=106 Identities=23% Similarity=0.365 Sum_probs=70.0
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCCeEEEE--------cCCCCChhHHH----hcC-------ceecCCHHhhc-CC
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYH--------DRVKMDPQLEK----ETG-------AKFEEDLDTML-PK 92 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~--------d~~~~~~~~~~----~~g-------~~~~~~l~ell-~~ 92 (221)
+|.|+||.|-|+|++|+..|+.|...|.+|+++ |+.....+... +.| .+.+.+ +++ .+
T Consensus 241 ~l~g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i~~~~~a~~~~~--~il~~~ 318 (501)
T 3mw9_A 241 GFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYEG--SILEVD 318 (501)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSSTTCTTSEEECS--CGGGSC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCeecccCceeecc--cccccc
Confidence 589999999999999999999999999998763 33322222211 111 122222 333 57
Q ss_pred CCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 93 CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 93 aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
|||.+-|.. .+.|+.+....++ -.+|+-.+.+. ...++ .+.|.+..|.
T Consensus 319 ~DIliPcA~-----~n~I~~~na~~l~-akiV~EgAN~p-~T~eA-~~iL~~rGIl 366 (501)
T 3mw9_A 319 CDILIPAAS-----EKQLTKSNAPRVK-AKIIAEGANGP-TTPEA-DKIFLERNIM 366 (501)
T ss_dssp CSEEEECSS-----SCCBCTTTGGGCC-CSEEECCSSSC-BCHHH-HHHHHHTTCE
T ss_pred ceEEeeccc-----cCccCHhHHHHcC-ceEEEeCCCCc-CCHHH-HHHHHHCCCE
Confidence 999988764 4567777777775 35666666775 55554 4566666665
No 397
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=97.08 E-value=0.00042 Score=59.52 Aligned_cols=89 Identities=24% Similarity=0.286 Sum_probs=62.3
Q ss_pred CCCEEEEE-ccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec----CCHHhhc-----CCCCEEEEeCCCCh
Q 027577 35 EGKTVGTV-GCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----EDLDTML-----PKCDIVVVNTPLTE 104 (221)
Q Consensus 35 ~g~~vgII-G~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~----~~l~ell-----~~aDvVv~~~p~~~ 104 (221)
.|++|.|+ |.|.+|...++.++..|++|++.++++...+.++++|...+ +++.+.+ ...|+|+-|+.. +
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g~-~ 228 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNT-D 228 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESSCH-H
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECCCc-h
Confidence 68999999 69999999999999999999999987655666677775422 1222222 247888877651 1
Q ss_pred hhhhcchHHHHhcCCCCCEEEEcC
Q 027577 105 KTRGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 105 ~t~~~i~~~~~~~mk~ga~lIn~s 128 (221)
..-...+..++++..+|.++
T Consensus 229 ----~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 229 ----MYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp ----HHHHHHHHHEEEEEEEEESS
T ss_pred ----HHHHHHHHHhccCCEEEEEC
Confidence 11234566777877777764
No 398
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=97.08 E-value=0.00055 Score=58.22 Aligned_cols=89 Identities=19% Similarity=0.162 Sum_probs=64.1
Q ss_pred CCCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHhh----c--CCCCEEEEeCCC
Q 027577 35 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTM----L--PKCDIVVVNTPL 102 (221)
Q Consensus 35 ~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~el----l--~~aDvVv~~~p~ 102 (221)
.|++|.|+| .|.+|...++.++..|++|++.++++...+.++++|...+ .++.+. . ...|+|+-++..
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 219 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQ 219 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCG
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCCh
Confidence 589999999 8999999999999999999999987655666666665321 122221 1 257888887762
Q ss_pred ChhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 103 TEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
. .-...+..++++..++.++.
T Consensus 220 --~----~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 220 --D----TWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp --G----GHHHHHTTEEEEEEEEECCC
T ss_pred --H----HHHHHHHHhcCCCEEEEEec
Confidence 1 23456778888888888763
No 399
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=97.08 E-value=0.00056 Score=58.07 Aligned_cols=88 Identities=22% Similarity=0.191 Sum_probs=67.4
Q ss_pred CCCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec-----CC-HHhhcCCCCEEEEeCCCChhhh
Q 027577 35 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----ED-LDTMLPKCDIVVVNTPLTEKTR 107 (221)
Q Consensus 35 ~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~-l~ell~~aDvVv~~~p~~~~t~ 107 (221)
.|.+|.|+| .|.+|...++.++..|++|++.++.. ..+.++++|+..+ .+ +.+.+...|+|+-++.. +
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g~-~--- 226 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGG-D--- 226 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSCH-H---
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCCc-H---
Confidence 588999997 99999999999999999998887533 3566677776422 23 55666789999998861 1
Q ss_pred hcchHHHHhcCCCCCEEEEcCC
Q 027577 108 GMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn~sr 129 (221)
.. ...++.++++..++.++.
T Consensus 227 -~~-~~~~~~l~~~G~iv~~g~ 246 (321)
T 3tqh_A 227 -VG-IQSIDCLKETGCIVSVPT 246 (321)
T ss_dssp -HH-HHHGGGEEEEEEEEECCS
T ss_pred -HH-HHHHHhccCCCEEEEeCC
Confidence 12 567888999999998853
No 400
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.07 E-value=0.00094 Score=57.31 Aligned_cols=96 Identities=24% Similarity=0.323 Sum_probs=60.9
Q ss_pred CCEEEEEc-cCHHHHHHHHHHccCC--CeEEEEcCCCCChhHH---HhcC----cee---cCCHHhhcCCCCEEEEeCCC
Q 027577 36 GKTVGTVG-CGRIGKLLLQRLKPFN--CNLLYHDRVKMDPQLE---KETG----AKF---EEDLDTMLPKCDIVVVNTPL 102 (221)
Q Consensus 36 g~~vgIIG-~G~iG~~iA~~l~~~G--~~V~~~d~~~~~~~~~---~~~g----~~~---~~~l~ell~~aDvVv~~~p~ 102 (221)
.+||+|+| .|.+|..++..|...| .+|.++|+.+. .... .... +.. ..++++.++.+|+|+++.+.
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~ 86 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGV 86 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCc
Confidence 46899999 8999999999998777 68999997543 1111 1111 111 22567889999999999863
Q ss_pred Chhhhhc-----------chH---HHHhcCCCCCEEEEcCCCCccCH
Q 027577 103 TEKTRGM-----------FDK---DRIAKMKKGVLIVNNARGAIMDT 135 (221)
Q Consensus 103 ~~~t~~~-----------i~~---~~~~~mk~ga~lIn~srg~~vd~ 135 (221)
... .+. +-. +.+....+.+++++.+ .++|.
T Consensus 87 ~~~-~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S--NPv~~ 130 (326)
T 1smk_A 87 PRK-PGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS--NPVNS 130 (326)
T ss_dssp CCC-SSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC--SSHHH
T ss_pred CCC-CCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC--CchHH
Confidence 221 110 111 1122335788999864 56665
No 401
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=97.07 E-value=0.00094 Score=53.71 Aligned_cols=70 Identities=19% Similarity=0.221 Sum_probs=51.1
Q ss_pred CCCCEEEEEc-cCHHHHHHHHHHccCCC--eEEEEcCCCCChhHHHhcCce-------ecCCHHhhcCCCCEEEEeCCCC
Q 027577 34 LEGKTVGTVG-CGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQLEKETGAK-------FEEDLDTMLPKCDIVVVNTPLT 103 (221)
Q Consensus 34 l~g~~vgIIG-~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~g~~-------~~~~l~ell~~aDvVv~~~p~~ 103 (221)
+.+|+|.|.| .|.||+.+++.|...|+ +|++.+|++...+.....++. ..++++++++.+|+|+.+....
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~ 95 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 95 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence 5689999999 69999999999999999 999999876432211111121 1235667788999999988644
No 402
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=97.07 E-value=0.00044 Score=57.21 Aligned_cols=107 Identities=18% Similarity=0.228 Sum_probs=68.2
Q ss_pred HHHHHcCCCccCcccCcccCCCCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCC-------------------hh
Q 027577 14 HHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMD-------------------PQ 73 (221)
Q Consensus 14 ~~~~~~g~w~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-------------------~~ 73 (221)
.+++.-..|.... ...|.+++|.|||+|.+|..+++.|...|. ++.++|..... .+
T Consensus 10 ~Rq~~l~~~g~~~----q~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~ 85 (251)
T 1zud_1 10 SRQILLDDIALDG----QQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQ 85 (251)
T ss_dssp HHHHTSTTTHHHH----HHHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHH
T ss_pred hhhcchhhcCHHH----HHHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHH
Confidence 4444445575321 236889999999999999999999999998 68888764211 01
Q ss_pred HH----Hhc--Cc--eec------CCHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcC
Q 027577 74 LE----KET--GA--KFE------EDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 74 ~~----~~~--g~--~~~------~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~s 128 (221)
.+ .+. ++ ... ++++++++++|+|+.++. +.+++..+++..... +..+|+.+
T Consensus 86 ~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~r~~l~~~~~~~---~~p~i~~~ 150 (251)
T 1zud_1 86 VSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTD-NMATRQEINAACVAL---NTPLITAS 150 (251)
T ss_dssp HHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHHCSEEEECCS-SHHHHHHHHHHHHHT---TCCEEEEE
T ss_pred HHHHHHHHHCCCCEEEEEeccCCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHHh---CCCEEEEe
Confidence 11 111 11 111 134567788999998886 667777777665542 34455543
No 403
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=97.06 E-value=0.0033 Score=53.92 Aligned_cols=67 Identities=6% Similarity=-0.010 Sum_probs=53.4
Q ss_pred CCCCCEEEE-----EccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeC
Q 027577 33 DLEGKTVGT-----VGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNT 100 (221)
Q Consensus 33 ~l~g~~vgI-----IG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~ 100 (221)
.+. .+|++ +|=+++.++++..+..+|++|.+..|...........++....+++++++++|+|..-.
T Consensus 166 ~l~-l~ia~a~~~~vGD~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~ 237 (324)
T 1js1_X 166 RPK-VVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYELDPKFVGNARVEYDQMKAFEGADFIYAKN 237 (324)
T ss_dssp SCE-EEEECCCCSSCCCSHHHHHHHHHHHTSSSEEEEECCTTCCCCHHHHTTCEEESCHHHHHTTCSEEEECC
T ss_pred Cee-EEEEEEcccccCCcchHHHHHHHHHHCCCEEEEeCCcccCCChhhccceEEECCHHHHhCCCCEEEecC
Confidence 356 79999 99999999999999999999999998653322211135676789999999999998843
No 404
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.06 E-value=0.00041 Score=59.87 Aligned_cols=102 Identities=12% Similarity=0.143 Sum_probs=63.2
Q ss_pred CEEEEEccCHHHHHHHHHHccC---------CCeE-EEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhh
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF---------NCNL-LYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKT 106 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~---------G~~V-~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t 106 (221)
.+|||||+|.||+.+++.+... +++| .++|++........ . ...++++++++ +.|+|+.|+|.....
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~~~-~-~~~~~d~~~ll-~iDvVve~t~~~~~a 80 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAIP-Q-ELLRAEPFDLL-EADLVVEAMGGVEAP 80 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCSSC-G-GGEESSCCCCT-TCSEEEECCCCSHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhccC-c-ccccCCHHHHh-CCCEEEECCCCcHHH
Confidence 4799999999999999988654 4564 45676543221110 0 12346888888 999999999844211
Q ss_pred hhcchHHHHhcCCCCCEEEEcCCCCc-cCHHHHHHHHHhC
Q 027577 107 RGMFDKDRIAKMKKGVLIVNNARGAI-MDTQAVVDACSSG 145 (221)
Q Consensus 107 ~~~i~~~~~~~mk~ga~lIn~srg~~-vd~~al~~al~~g 145 (221)
. .-....|+.|..+|......+ ..-+.|.++.++.
T Consensus 81 ~----~~~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 81 L----RLVLPALEAGIPLITANKALLAEAWESLRPFAEEG 116 (332)
T ss_dssp H----HHHHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT
T ss_pred H----HHHHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC
Confidence 1 112335667777777533322 2445666666655
No 405
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.05 E-value=0.00072 Score=56.71 Aligned_cols=90 Identities=20% Similarity=0.205 Sum_probs=55.3
Q ss_pred CCEEEEEcc-CHHHHHHHHHHc-cCCCeEE-EEcCCCCC---hhHH-----HhcCceecCCHHhhcCCCCEEEEeCCCCh
Q 027577 36 GKTVGTVGC-GRIGKLLLQRLK-PFNCNLL-YHDRVKMD---PQLE-----KETGAKFEEDLDTMLPKCDIVVVNTPLTE 104 (221)
Q Consensus 36 g~~vgIIG~-G~iG~~iA~~l~-~~G~~V~-~~d~~~~~---~~~~-----~~~g~~~~~~l~ell~~aDvVv~~~p~~~ 104 (221)
.++|+|+|+ |.||+.+++.+. .-|+++. ++|+.+.. .+.. ...++...+++++++.++|+|+-+++ |
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft~--p 82 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTR--P 82 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSC--H
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcCC--h
Confidence 368999998 999999999875 5578865 67765421 0110 11234445678888889999995554 3
Q ss_pred hhhhcchHHHHhcCCCCCEEEEcCCC
Q 027577 105 KTRGMFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 105 ~t~~~i~~~~~~~mk~ga~lIn~srg 130 (221)
+... .-....++.|.-+|-...|
T Consensus 83 ~~~~---~~~~~a~~~G~~vVigTtG 105 (273)
T 1dih_A 83 EGTL---NHLAFCRQHGKGMVIGTTG 105 (273)
T ss_dssp HHHH---HHHHHHHHTTCEEEECCCC
T ss_pred HHHH---HHHHHHHhCCCCEEEECCC
Confidence 3221 1122334456556654445
No 406
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=97.05 E-value=0.00048 Score=59.43 Aligned_cols=89 Identities=21% Similarity=0.216 Sum_probs=64.4
Q ss_pred CCCEEEEE-ccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHhhc-----CCCCEEEEeCCCC
Q 027577 35 EGKTVGTV-GCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTML-----PKCDIVVVNTPLT 103 (221)
Q Consensus 35 ~g~~vgII-G~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell-----~~aDvVv~~~p~~ 103 (221)
.|++|.|+ |.|.||..+++.++..|++|++.++++...+.++++|...+ .++.+.+ ...|+|+-++..
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~- 245 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGA- 245 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCG-
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCH-
Confidence 58999999 68999999999999999999999987655666666665421 1222222 257888888762
Q ss_pred hhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 104 EKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
+ .-...+..++++..++.++.
T Consensus 246 ~-----~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 246 A-----YFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp G-----GHHHHHHTEEEEEEEEECCC
T ss_pred H-----HHHHHHHHhccCCEEEEEEe
Confidence 1 23456777888888888763
No 407
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=97.04 E-value=0.002 Score=55.52 Aligned_cols=31 Identities=26% Similarity=0.394 Sum_probs=25.3
Q ss_pred CEEEEEccCHHHHHHHHHHcc-CCCeEEEEcC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKP-FNCNLLYHDR 67 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~-~G~~V~~~d~ 67 (221)
.+|||+|+|.||+.+++.+.. -+++|.+.+.
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d 35 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAIND 35 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEEC
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecC
Confidence 489999999999999999865 4678766653
No 408
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=97.04 E-value=0.0013 Score=59.33 Aligned_cols=34 Identities=15% Similarity=0.238 Sum_probs=27.4
Q ss_pred CEEEEEccCHHHHHHHHHHcc-CCC---eEEEEcCCCC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKP-FNC---NLLYHDRVKM 70 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~-~G~---~V~~~d~~~~ 70 (221)
++|.|||+|.||+.+++.+.. .++ +|++.|+...
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~ 51 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGT 51 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchh
Confidence 469999999999999998864 455 6888887653
No 409
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=97.04 E-value=0.0037 Score=53.23 Aligned_cols=68 Identities=24% Similarity=0.332 Sum_probs=53.2
Q ss_pred CCCCCEEEEEcc---CHHHHHHHHHHccC-CCeEEEEcCCCC--Chh---HHHhcCce--ecCCHHhhcCCCCEEEEeC
Q 027577 33 DLEGKTVGTVGC---GRIGKLLLQRLKPF-NCNLLYHDRVKM--DPQ---LEKETGAK--FEEDLDTMLPKCDIVVVNT 100 (221)
Q Consensus 33 ~l~g~~vgIIG~---G~iG~~iA~~l~~~-G~~V~~~d~~~~--~~~---~~~~~g~~--~~~~l~ell~~aDvVv~~~ 100 (221)
.+.|.||++||= |++.++++..+..+ |++|.+..|... +.+ .+++.|.. ...+++++++++|+|....
T Consensus 148 ~l~glkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~~ 226 (306)
T 4ekn_B 148 RIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTR 226 (306)
T ss_dssp CSTTCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCGGGCCTTCSEEEECC
T ss_pred CcCCCEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEeCC
Confidence 589999999995 69999999999999 999999987532 222 22344543 4679999999999998753
No 410
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=97.02 E-value=0.0071 Score=52.55 Aligned_cols=93 Identities=13% Similarity=0.111 Sum_probs=64.9
Q ss_pred CCCCE--EEEEcc---C--HHHHHHHHHHccCCCeEEEEcCC-C-CCh-hHH-------HhcC--ceecCCHHhhcCCCC
Q 027577 34 LEGKT--VGTVGC---G--RIGKLLLQRLKPFNCNLLYHDRV-K-MDP-QLE-------KETG--AKFEEDLDTMLPKCD 94 (221)
Q Consensus 34 l~g~~--vgIIG~---G--~iG~~iA~~l~~~G~~V~~~d~~-~-~~~-~~~-------~~~g--~~~~~~l~ell~~aD 94 (221)
+.|+| |+++|= | ++.++++..+..+|++|.+..|. . ... +.. +..| +....+++++++++|
T Consensus 188 l~glkvvva~vGDl~~~~nrva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aD 267 (359)
T 1zq6_A 188 LRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGAD 267 (359)
T ss_dssp CTTCEEEEEECCCSSCCCSHHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHHHHTTCS
T ss_pred ccCCeeEEEEEecccccccchHHHHHHHHHHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCC
Confidence 88999 999994 5 89999999999999999999886 3 222 221 1333 445679999999999
Q ss_pred EEEEeCCCChh---------------hhhcchHHHHhcCCCCCEEEEc
Q 027577 95 IVVVNTPLTEK---------------TRGMFDKDRIAKMKKGVLIVNN 127 (221)
Q Consensus 95 vVv~~~p~~~~---------------t~~~i~~~~~~~mk~ga~lIn~ 127 (221)
+|..-.=..+. ....++.+.++.+| +++|+.+
T Consensus 268 vVyt~~w~se~~mg~~~~~~~~~~~~~~y~vt~e~l~~a~-~ai~MHc 314 (359)
T 1zq6_A 268 VVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMALTN-NGVFSHC 314 (359)
T ss_dssp EEEEECCCCGGGTTCCTTHHHHHGGGGGGSBCHHHHHTSS-SCEEECC
T ss_pred EEEECCccccccCCcchhhHHHHHHhcCCCCCHHHHHhCC-CCEEECC
Confidence 99876532210 01224666666666 6666654
No 411
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=97.02 E-value=0.00046 Score=58.93 Aligned_cols=89 Identities=20% Similarity=0.163 Sum_probs=62.2
Q ss_pred CCCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHhh----c--CCCCEEEEeCCC
Q 027577 35 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTM----L--PKCDIVVVNTPL 102 (221)
Q Consensus 35 ~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~el----l--~~aDvVv~~~p~ 102 (221)
.|++|.|+| .|.+|...++.++..|++|++.++++...+.++++|...+ .++.+. . ...|+|+-++..
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~ 227 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGK 227 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCCh
Confidence 589999999 8999999999999999999999987655566666665321 122221 1 247888777752
Q ss_pred ChhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 103 TEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
-.-...+..++++..++.++.
T Consensus 228 ------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 228 ------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp ------GGHHHHHHHEEEEEEEEECCC
T ss_pred ------HHHHHHHHHhccCCEEEEEcC
Confidence 123445667777777777653
No 412
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=97.01 E-value=0.00031 Score=59.07 Aligned_cols=38 Identities=26% Similarity=0.389 Sum_probs=35.2
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCC
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVK 69 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 69 (221)
.+|.|++|.|||.|.+|...++.|...|++|.++++..
T Consensus 9 ~~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 9 HQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp ECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred EEcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 47899999999999999999999999999999999754
No 413
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=97.00 E-value=0.0011 Score=59.47 Aligned_cols=71 Identities=18% Similarity=0.203 Sum_probs=49.9
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHH---hcCceec--CCHHhhcCCCCEEEEeCCCCh
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK---ETGAKFE--EDLDTMLPKCDIVVVNTPLTE 104 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~---~~g~~~~--~~l~ell~~aDvVv~~~p~~~ 104 (221)
.+++|++|.|||.|.+|...++.|...|.+|.++++... .+... ..++... .--++.+..+|+|+.++. .+
T Consensus 8 ~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~-~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~at~-~~ 83 (457)
T 1pjq_A 8 CQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFI-PQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATD-DD 83 (457)
T ss_dssp ECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCC-HHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCS-CH
T ss_pred EECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCC-HHHHHHHhcCCEEEEECCCCccccCCccEEEEcCC-CH
Confidence 468999999999999999999999999999999998532 22211 1233321 112345678998877654 44
No 414
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.00 E-value=0.0011 Score=57.21 Aligned_cols=89 Identities=15% Similarity=0.232 Sum_probs=53.5
Q ss_pred CEEEEEc-cCHHHHHHHHHHccC-CCeEEEEc-CC---CCChhHH------Hhc-CceecC--CHHhhcCCCCEEEEeCC
Q 027577 37 KTVGTVG-CGRIGKLLLQRLKPF-NCNLLYHD-RV---KMDPQLE------KET-GAKFEE--DLDTMLPKCDIVVVNTP 101 (221)
Q Consensus 37 ~~vgIIG-~G~iG~~iA~~l~~~-G~~V~~~d-~~---~~~~~~~------~~~-g~~~~~--~l~ell~~aDvVv~~~p 101 (221)
.+|+|+| .|.+|+.+.+.|... .+++..+. ++ ....... ... .....+ +.+++++++|+|++|+|
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a~p 84 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATA 84 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEECSC
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEECCC
Confidence 5899999 699999999999874 45766553 32 1111111 111 122111 45565589999999999
Q ss_pred CChhhhhcchHHHHhcCCCCCEEEEcCCC
Q 027577 102 LTEKTRGMFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~ga~lIn~srg 130 (221)
... +.. +-. ..++.|+.+|+.|..
T Consensus 85 ~~~-s~~-~~~---~~~~~g~~vIDlSa~ 108 (337)
T 3dr3_A 85 HEV-SHD-LAP---QFLEAGCVVFDLSGA 108 (337)
T ss_dssp HHH-HHH-HHH---HHHHTTCEEEECSST
T ss_pred hHH-HHH-HHH---HHHHCCCEEEEcCCc
Confidence 221 111 112 224679999999853
No 415
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=97.00 E-value=0.00059 Score=59.47 Aligned_cols=90 Identities=17% Similarity=0.204 Sum_probs=63.6
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCC-CeEEEEcCCCCChhHHHhcCceec-C-C---HH-------hhcC--CCCEEEEe
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFN-CNLLYHDRVKMDPQLEKETGAKFE-E-D---LD-------TMLP--KCDIVVVN 99 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G-~~V~~~d~~~~~~~~~~~~g~~~~-~-~---l~-------ell~--~aDvVv~~ 99 (221)
.|++|.|+|.|.+|...++.++.+| .+|++.++++...+.++++|+..+ + + -+ ++.. ..|+|+-+
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~ 274 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEA 274 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEEC
Confidence 4889999999999999999999999 599999987666666777776421 1 1 11 1111 47888888
Q ss_pred CCCChhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 100 TPLTEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 100 ~p~~~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
+...+ .-...++.++++..++.++.
T Consensus 275 ~g~~~-----~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 275 TGDSR-----ALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp SSCTT-----HHHHHHHHEEEEEEEEECCC
T ss_pred CCCHH-----HHHHHHHHHhcCCEEEEEec
Confidence 76221 12345667788888887764
No 416
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=97.00 E-value=0.0035 Score=56.55 Aligned_cols=103 Identities=17% Similarity=0.114 Sum_probs=70.5
Q ss_pred CCCCCEEEEEccC----------HHHHHHHHHHccCCCeEEEEcCCCCChh---HHHh-c-------CceecCCHHhhcC
Q 027577 33 DLEGKTVGTVGCG----------RIGKLLLQRLKPFNCNLLYHDRVKMDPQ---LEKE-T-------GAKFEEDLDTMLP 91 (221)
Q Consensus 33 ~l~g~~vgIIG~G----------~iG~~iA~~l~~~G~~V~~~d~~~~~~~---~~~~-~-------g~~~~~~l~ell~ 91 (221)
.+.|++|+|+|+- +-...+++.|...|.+|.+|||.-...+ .... + .+..+.++.+.++
T Consensus 332 ~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (481)
T 2o3j_A 332 TVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITVESDPYAAAR 411 (481)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEEESSHHHHHT
T ss_pred ccCCCeEEEEeeeeCCCCCccccChHHHHHHHHHHCCCEEEEECCCCCchhhHHHHHhhhccccccCceeecCCHHHHHc
Confidence 4899999999963 3678899999999999999998642211 1111 1 1344567888999
Q ss_pred CCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHH
Q 027577 92 KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAV 138 (221)
Q Consensus 92 ~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al 138 (221)
.+|+|++++.-. +.+.+--....+.|+...+|+|. |+ ++|.+.+
T Consensus 412 ~ad~~vi~t~~~-~f~~~~~~~~~~~~~~~~~i~D~-r~-~~~~~~~ 455 (481)
T 2o3j_A 412 GAHAIVVLTEWD-EFVELNYSQIHNDMQHPAAIFDG-RL-ILDQKAL 455 (481)
T ss_dssp TCSEEEECSCCG-GGTTSCHHHHHHHSCSSCEEEES-SS-CSCHHHH
T ss_pred CCCEEEEcCCcH-HhhccCHHHHHHhcCCCCEEEEC-CC-CCCHHHH
Confidence 999999999743 33333233445567776688886 54 4565543
No 417
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=97.00 E-value=0.0044 Score=55.01 Aligned_cols=109 Identities=22% Similarity=0.346 Sum_probs=69.1
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCCeEE-EEcCC-------CCChhHHHhc----Cc------------eecCCHH
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRV-------KMDPQLEKET----GA------------KFEEDLD 87 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~-~~d~~-------~~~~~~~~~~----g~------------~~~~~l~ 87 (221)
.++.|++|.|.|+|++|+.+|+.|...|.+|+ +.|.+ ....+...+. +. ..+.+.+
T Consensus 206 ~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~~~ 285 (421)
T 1v9l_A 206 GGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNPD 285 (421)
T ss_dssp SCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSSTT
T ss_pred CCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccCceEeCCch
Confidence 46899999999999999999999999999987 34442 1122222111 11 1221334
Q ss_pred hhc-CCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 88 TML-PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 88 ell-~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
+++ ..||+++-|.- .+.|+.+....++ =.+|+-.+.+.+ ..++ .+.|.+..+.
T Consensus 286 ~~~~~~~Dil~P~A~-----~~~I~~~~a~~l~-ak~V~EgAN~p~-t~~a-~~~l~~~Gi~ 339 (421)
T 1v9l_A 286 AIFKLDVDIFVPAAI-----ENVIRGDNAGLVK-ARLVVEGANGPT-TPEA-ERILYERGVV 339 (421)
T ss_dssp GGGGCCCSEEEECSC-----SSCBCTTTTTTCC-CSEEECCSSSCB-CHHH-HHHHHTTTCE
T ss_pred hhhcCCccEEEecCc-----CCccchhhHHHcC-ceEEEecCCCcC-CHHH-HHHHHHCCCE
Confidence 555 47999998874 3446666666664 356666666664 4444 4566766666
No 418
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=96.99 E-value=0.0015 Score=54.08 Aligned_cols=66 Identities=12% Similarity=0.068 Sum_probs=48.1
Q ss_pred CEEEEEc-cCHHHHHHHHHHccC-CCeEEEEcCCCCChhHHHhcCcee-------cCCHHhhcCCCCEEEEeCCC
Q 027577 37 KTVGTVG-CGRIGKLLLQRLKPF-NCNLLYHDRVKMDPQLEKETGAKF-------EEDLDTMLPKCDIVVVNTPL 102 (221)
Q Consensus 37 ~~vgIIG-~G~iG~~iA~~l~~~-G~~V~~~d~~~~~~~~~~~~g~~~-------~~~l~ell~~aDvVv~~~p~ 102 (221)
|+|.|.| .|.||+.+++.|... |++|.+.+|++.........++.. .++++++++.+|+|+.+.+.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 5799999 599999999999887 999999998753322222223322 13456788999999988764
No 419
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=96.98 E-value=0.00059 Score=58.40 Aligned_cols=89 Identities=25% Similarity=0.209 Sum_probs=60.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhHHH-hcCceec------CCHHhhc-----CCCCEEEEeCC
Q 027577 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-ETGAKFE------EDLDTML-----PKCDIVVVNTP 101 (221)
Q Consensus 35 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~~------~~l~ell-----~~aDvVv~~~p 101 (221)
.|++|.|+|. |.+|..+++.++..|++|++.+++....+.++ ++|.... .++.+.+ ...|+|+.++.
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g 234 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVG 234 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECCC
Confidence 5899999997 99999999999999999999998654445554 4554311 1222222 24677777765
Q ss_pred CChhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 102 LTEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
. + .....+..++++..++.++-
T Consensus 235 ~-~-----~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 235 G-K-----MLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp H-H-----HHHHHHTTEEEEEEEEECCC
T ss_pred H-H-----HHHHHHHHHhcCCEEEEEcc
Confidence 1 1 22445667777777777653
No 420
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=96.97 E-value=0.00072 Score=58.92 Aligned_cols=90 Identities=20% Similarity=0.258 Sum_probs=53.2
Q ss_pred CEEEEEccCHHHHHHHHHHccC--C--CeEE-EEcCCCCChhHHHhc-CceecCCHHhhcCC------------------
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF--N--CNLL-YHDRVKMDPQLEKET-GAKFEEDLDTMLPK------------------ 92 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~--G--~~V~-~~d~~~~~~~~~~~~-g~~~~~~l~ell~~------------------ 92 (221)
.+|||||+|.||+.+++.+... | ++|. ++|++. ....... |+..++++++++++
T Consensus 5 i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~--~~~~~~~~gi~~~~~~~e~l~~~~~~~~did~v~e~~~~~ 82 (358)
T 1ebf_A 5 VNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAER--SLISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAHLKTS 82 (358)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSB--EEECSSCSCCSCTTCHHHHHHTCCCBCCCHHHHHHHHTTC
T ss_pred EEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECCh--hhhccccCCCCccccHHHHHhcccCCCCCHHHHHHHhhhc
Confidence 4799999999999999999764 3 4554 455422 1111111 33333455555433
Q ss_pred --CCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCcc
Q 027577 93 --CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIM 133 (221)
Q Consensus 93 --aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~v 133 (221)
.|+|+.|+|..... ......|+.|..+|......+.
T Consensus 83 ~~~DvVV~~t~~~~~a-----~~~~~AL~aGkhVVtaNkkpla 120 (358)
T 1ebf_A 83 PKPVILVDNTSSAYIA-----GFYTKFVENGISIATPNKKAFS 120 (358)
T ss_dssp SSCEEEEECSCCHHHH-----TTHHHHHHTTCEEECCCCGGGS
T ss_pred cCCcEEEEcCCChHHH-----HHHHHHHHCCCeEEecCccccc
Confidence 27999999843211 1123456778888876555444
No 421
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=96.97 E-value=0.00047 Score=59.14 Aligned_cols=89 Identities=16% Similarity=0.131 Sum_probs=60.0
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhcCcee-c----CCHHhhc-----CCCCEEEEeCCCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKF-E----EDLDTML-----PKCDIVVVNTPLT 103 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~-~----~~l~ell-----~~aDvVv~~~p~~ 103 (221)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++...+.++++ ... + .++.+.+ ...|+|+-++...
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~ 242 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNE 242 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhcCCCCCEEEECCCCH
Confidence 78999999999999999999999999 899999865433444333 221 1 1222222 2478888877621
Q ss_pred hhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 104 EKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
+. -...+..|+++..++.++.
T Consensus 243 ~~-----~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 243 AA-----IHQGLMALIPGGEARILGI 263 (343)
T ss_dssp HH-----HHHHHHHEEEEEEEEECCC
T ss_pred HH-----HHHHHHHHhcCCEEEEEec
Confidence 11 2345667777777877754
No 422
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=96.96 E-value=0.0039 Score=55.76 Aligned_cols=110 Identities=18% Similarity=0.227 Sum_probs=68.2
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccCCCeEE-EEcCC-------CCChhHHH------h-------------cCceec
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRV-------KMDPQLEK------E-------------TGAKFE 83 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~-~~d~~-------~~~~~~~~------~-------------~g~~~~ 83 (221)
+.++.|+||.|-|+|++|...|+.|...|.+|+ +.|.+ ....+... + .+.+.+
T Consensus 234 g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~~v 313 (456)
T 3r3j_A 234 NDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYSKTAKYF 313 (456)
T ss_dssp TCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTCSSCEEE
T ss_pred CCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcCCCceEe
Confidence 457899999999999999999999999999976 44532 22211111 1 122233
Q ss_pred CCHHhhc-CCCCEEEEeCCCChhhhhcchHHHHhcCC--CCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 84 EDLDTML-PKCDIVVVNTPLTEKTRGMFDKDRIAKMK--KGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 84 ~~l~ell-~~aDvVv~~~p~~~~t~~~i~~~~~~~mk--~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
+.++++ .+||+.+-|.- .+.|+.+....+. .=.+|+-.+.+.+- .++ .+.|.+..|.
T Consensus 314 -~~~~i~~~~~DI~iPcA~-----~~~I~~~na~~l~~~~ak~V~EgAN~p~T-~eA-~~iL~~rGI~ 373 (456)
T 3r3j_A 314 -ENQKPWNIPCDIAFPCAT-----QNEINENDADLFIQNKCKMIVEGANMPTH-IKA-LHKLKQNNII 373 (456)
T ss_dssp -CSCCGGGSCCSEEEECSC-----TTCBCHHHHHHHHHHTCCEEECCSSSCBC-TTH-HHHHHTTTCE
T ss_pred -CCccccccCccEEEeCCC-----ccchhhHHHHHHHhcCCeEEEecCCCCCC-HHH-HHHHHHCCCE
Confidence 223433 46999887764 4567666666552 23466666666653 333 3566666665
No 423
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=96.95 E-value=0.0005 Score=59.54 Aligned_cols=89 Identities=18% Similarity=0.176 Sum_probs=64.1
Q ss_pred CCCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHhhc-----CCCCEEEEeCCCC
Q 027577 35 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTML-----PKCDIVVVNTPLT 103 (221)
Q Consensus 35 ~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell-----~~aDvVv~~~p~~ 103 (221)
.|++|.|+| .|.+|..+++.++..|++|++.++++...+.++++|...+ .++.+.+ ...|+|+-++..
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~- 241 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG- 241 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECSCT-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECCCH-
Confidence 589999999 7999999999999999999999987555556666665421 1232222 247888888762
Q ss_pred hhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 104 EKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
+ .....++.|+++..+|.++.
T Consensus 242 ~-----~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 242 A-----MFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp H-----HHHHHHHHEEEEEEEEECCC
T ss_pred H-----HHHHHHHHHhcCCEEEEEeC
Confidence 1 22456677888888888764
No 424
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=96.95 E-value=0.00084 Score=56.86 Aligned_cols=73 Identities=16% Similarity=0.141 Sum_probs=50.9
Q ss_pred cccCCCCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChh-HHHh-cCcee-------cCCHHhhcC--CCCEEE
Q 027577 30 RAYDLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQ-LEKE-TGAKF-------EEDLDTMLP--KCDIVV 97 (221)
Q Consensus 30 ~~~~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~-~~~~-~g~~~-------~~~l~ell~--~aDvVv 97 (221)
....+.+|+|.|.|. |.||+.+++.|...|++|++.+|+..... .... .++.. ..+++++++ .+|+|+
T Consensus 14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vi 93 (330)
T 2pzm_A 14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVV 93 (330)
T ss_dssp CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEE
Confidence 346799999999996 99999999999999999999998543211 0111 11211 123456677 899998
Q ss_pred EeCCC
Q 027577 98 VNTPL 102 (221)
Q Consensus 98 ~~~p~ 102 (221)
.+...
T Consensus 94 h~A~~ 98 (330)
T 2pzm_A 94 HSAAA 98 (330)
T ss_dssp ECCCC
T ss_pred ECCcc
Confidence 87653
No 425
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.94 E-value=0.00054 Score=60.04 Aligned_cols=95 Identities=13% Similarity=0.081 Sum_probs=66.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhcCceec----CCH-Hhhc----C--CCCEEEEeCCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE----EDL-DTML----P--KCDIVVVNTPL 102 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~----~~l-~ell----~--~aDvVv~~~p~ 102 (221)
.|++|.|+|.|.+|...++.++.+|. +|++.++++...+.++++|+..+ .++ .+.+ . .+|+|+-++..
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~ 264 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVDCGVDAVGF 264 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCCEEEECCCC
Confidence 58999999999999999999999999 89999987666667777776432 121 2212 1 58999988873
Q ss_pred Chh-----h----hhcchHHHHhcCCCCCEEEEcCC
Q 027577 103 TEK-----T----RGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 103 ~~~-----t----~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
... . ..-.-.+.+..++++..++.++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 265 EAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp TCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred ccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 210 0 00012456777888888887764
No 426
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=96.94 E-value=0.00093 Score=54.99 Aligned_cols=64 Identities=16% Similarity=0.280 Sum_probs=46.1
Q ss_pred EEEEEcc-CHHHHHHHHHHccC--CCeEEEEcCCCCChhHHHhcCcee-------cCCHHhhcCCCCEEEEeCC
Q 027577 38 TVGTVGC-GRIGKLLLQRLKPF--NCNLLYHDRVKMDPQLEKETGAKF-------EEDLDTMLPKCDIVVVNTP 101 (221)
Q Consensus 38 ~vgIIG~-G~iG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~g~~~-------~~~l~ell~~aDvVv~~~p 101 (221)
+|.|.|. |.||+.+++.|... |++|++.+|++.........++.. .++++++++.+|+|+.+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 4789995 99999999999988 999999998764433322233321 1245678889999987765
No 427
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=96.92 E-value=0.0031 Score=55.45 Aligned_cols=93 Identities=15% Similarity=0.102 Sum_probs=64.7
Q ss_pred CCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhhcchHHHH
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRI 115 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~ 115 (221)
-.++-|+|.|.+|+++++.++.+|++|.++|+++... + .+-+..+|-++...| . ..+.. +
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~------------~-~~~fp~a~~~~~~~p--~---~~~~~--~ 263 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFA------------T-TARFPTADEVVVDWP--H---RYLAA--Q 263 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTS------------C-TTTCSSSSEEEESCH--H---HHHHH--H
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhc------------c-cccCCCceEEEeCCh--H---HHHHh--h
Confidence 4589999999999999999999999999999754211 1 122455665554444 1 11111 1
Q ss_pred h---cCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 116 A---KMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 116 ~---~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
. .+.+++.+|=++++.-.|...|..+|+++...
T Consensus 264 ~~~~~~~~~t~vvvlTh~~~~D~~~L~~aL~~~~~~ 299 (386)
T 2we8_A 264 AEAGAIDARTVVCVLTHDPKFDVPLLEVALRLPDIA 299 (386)
T ss_dssp HHHTCCCTTCEEEECCCCHHHHHHHHHHHTTSSCCS
T ss_pred ccccCCCCCcEEEEEECChHhHHHHHHHHhcCCCCC
Confidence 1 25678888888888888888888888876333
No 428
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=96.90 E-value=0.0019 Score=55.81 Aligned_cols=31 Identities=26% Similarity=0.428 Sum_probs=25.4
Q ss_pred CEEEEEccCHHHHHHHHHHccC-CCeEEEEcC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF-NCNLLYHDR 67 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~-G~~V~~~d~ 67 (221)
.+|||+|+|.||+.+++.+... +++|.+.+.
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d 35 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVND 35 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEEC
Confidence 3899999999999999998765 677666553
No 429
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.90 E-value=0.0031 Score=54.78 Aligned_cols=86 Identities=22% Similarity=0.323 Sum_probs=55.5
Q ss_pred CCEEEEEc-cCHHHHHHHHHHccCC-CeEEEEcC-CCCChhHH-------HhcCceecCCHHhhcCCCCEEEEeCCCChh
Q 027577 36 GKTVGTVG-CGRIGKLLLQRLKPFN-CNLLYHDR-VKMDPQLE-------KETGAKFEEDLDTMLPKCDIVVVNTPLTEK 105 (221)
Q Consensus 36 g~~vgIIG-~G~iG~~iA~~l~~~G-~~V~~~d~-~~~~~~~~-------~~~g~~~~~~l~ell~~aDvVv~~~p~~~~ 105 (221)
=.+||||| .|.+|+.+.+.|...- .++..+.. +....... .+..+.. .+.+++++++|++++|+|..
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~-~~~~~~~~~~Dvvf~alp~~-- 89 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSE-FDPEKVSKNCDVLFTALPAG-- 89 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBC-CCHHHHHHHCSEEEECCSTT--
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEe-CCHHHhhcCCCEEEECCCcH--
Confidence 35899998 6999999999998764 45655543 22111111 1111222 24556657899999999933
Q ss_pred hhhcchHHHHhcCCCCCEEEEcCC
Q 027577 106 TRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 106 t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
...+....+ .|+.+||.|.
T Consensus 90 ----~s~~~~~~~-~g~~VIDlSs 108 (351)
T 1vkn_A 90 ----ASYDLVREL-KGVKIIDLGA 108 (351)
T ss_dssp ----HHHHHHTTC-CSCEEEESSS
T ss_pred ----HHHHHHHHh-CCCEEEECCh
Confidence 334455556 7999999985
No 430
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=96.89 E-value=0.0025 Score=53.48 Aligned_cols=40 Identities=10% Similarity=0.058 Sum_probs=35.5
Q ss_pred ccCCCCCEEEEEccC---HHHHHHHHHHccCCCeEEEEcCCCC
Q 027577 31 AYDLEGKTVGTVGCG---RIGKLLLQRLKPFNCNLLYHDRVKM 70 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G---~iG~~iA~~l~~~G~~V~~~d~~~~ 70 (221)
...+.||++.|.|.+ .||+++|+.|...|++|++.+++..
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~ 67 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSET 67 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChH
Confidence 457899999999985 8999999999999999999998753
No 431
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=96.89 E-value=0.0021 Score=55.62 Aligned_cols=89 Identities=13% Similarity=0.113 Sum_probs=63.8
Q ss_pred CCCEEEEEc-cCHHHHHHHHHHcc-CCCeEEEEcCCCCChhHHHhcCceec----CCHHhhc-----CCCCEEEEeCCCC
Q 027577 35 EGKTVGTVG-CGRIGKLLLQRLKP-FNCNLLYHDRVKMDPQLEKETGAKFE----EDLDTML-----PKCDIVVVNTPLT 103 (221)
Q Consensus 35 ~g~~vgIIG-~G~iG~~iA~~l~~-~G~~V~~~d~~~~~~~~~~~~g~~~~----~~l~ell-----~~aDvVv~~~p~~ 103 (221)
.|++|.|+| .|.+|...++.++. .|.+|++.++++...+.++++|...+ .++.+.+ ...|+|+-++..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~g~- 249 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHT- 249 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECSCH-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECCCc-
Confidence 588999999 99999999999997 68999999987666667777776432 1222222 257888887751
Q ss_pred hhhhhcchHHHHhcCCCCCEEEEcC
Q 027577 104 EKTRGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~lIn~s 128 (221)
+. .-...++.++++..++.++
T Consensus 250 ~~----~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 250 DK----HAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp HH----HHHHHHHHSCTTCEEEECS
T ss_pred hh----hHHHHHHHhcCCCEEEEEC
Confidence 11 2245667788888888773
No 432
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=96.88 E-value=0.0032 Score=54.59 Aligned_cols=91 Identities=20% Similarity=0.229 Sum_probs=65.6
Q ss_pred CCCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHhhc---CCCCEEEEeCCCChh
Q 027577 35 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTML---PKCDIVVVNTPLTEK 105 (221)
Q Consensus 35 ~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell---~~aDvVv~~~p~~~~ 105 (221)
.|++|.|+| .|.+|...++.++..|++|++.++ ....+.++++|...+ .++.+.+ ...|+|+-++.....
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~~~ 261 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTE 261 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTTHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCChhh
Confidence 589999999 799999999999999999988874 445566677776432 1232222 358999998873211
Q ss_pred hhhcchHHHHhcCCCCCEEEEcCCC
Q 027577 106 TRGMFDKDRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 106 t~~~i~~~~~~~mk~ga~lIn~srg 130 (221)
+ -...+..++++..++.++..
T Consensus 262 ~----~~~~~~~l~~~G~iv~~g~~ 282 (375)
T 2vn8_A 262 T----WAPDFLKKWSGATYVTLVTP 282 (375)
T ss_dssp H----HGGGGBCSSSCCEEEESCCS
T ss_pred h----hHHHHHhhcCCcEEEEeCCC
Confidence 1 13456778999999998754
No 433
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=96.88 E-value=0.0024 Score=56.64 Aligned_cols=67 Identities=16% Similarity=0.275 Sum_probs=52.4
Q ss_pred CCCCEEEEEc-----cC---HHHHHHHHHHccCCCeEEEEcCCCC--ChhHH-------HhcC--ceecCCHHhhcCCCC
Q 027577 34 LEGKTVGTVG-----CG---RIGKLLLQRLKPFNCNLLYHDRVKM--DPQLE-------KETG--AKFEEDLDTMLPKCD 94 (221)
Q Consensus 34 l~g~~vgIIG-----~G---~iG~~iA~~l~~~G~~V~~~d~~~~--~~~~~-------~~~g--~~~~~~l~ell~~aD 94 (221)
|.|+||+||| +| ++.++++..+..+|++|.+..|... .++.. ++.| +....+++++++++|
T Consensus 186 l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~d~~eav~~AD 265 (418)
T 2yfk_A 186 LKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTNSMAEAFKDAD 265 (418)
T ss_dssp GTTCEEEEECCCCSSSCCCSHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEESCHHHHHTTCS
T ss_pred cCCCEEEEEeccccccCccchHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhcCCC
Confidence 7899999997 34 4999999999999999999998643 22221 2345 355689999999999
Q ss_pred EEEEeC
Q 027577 95 IVVVNT 100 (221)
Q Consensus 95 vVv~~~ 100 (221)
+|..-+
T Consensus 266 VVytd~ 271 (418)
T 2yfk_A 266 VVYPKS 271 (418)
T ss_dssp EEEECC
T ss_pred EEEEcc
Confidence 999854
No 434
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=96.87 E-value=0.0027 Score=54.41 Aligned_cols=88 Identities=18% Similarity=0.125 Sum_probs=65.3
Q ss_pred CCEEEEE-ccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHhhc------CCCCEEEEeCCCC
Q 027577 36 GKTVGTV-GCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTML------PKCDIVVVNTPLT 103 (221)
Q Consensus 36 g~~vgII-G~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell------~~aDvVv~~~p~~ 103 (221)
+++|.|. |.|.+|...++.++..|++|++.+++....+.++++|...+ .++.+.+ ...|+|+-++..
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~- 243 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTG- 243 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCH-
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCC-
Confidence 3677666 89999999999999999999999987767777777776422 2222222 269999988861
Q ss_pred hhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 104 EKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
+. + ...+..++++..++.++.
T Consensus 244 ~~----~-~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 244 PL----A-SAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp HH----H-HHHHHHSCTTCEEEECCC
T ss_pred hh----H-HHHHhhhcCCCEEEEEec
Confidence 11 2 557788999999999873
No 435
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.85 E-value=0.0009 Score=53.19 Aligned_cols=67 Identities=19% Similarity=0.254 Sum_probs=47.7
Q ss_pred CEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhc-----Ccee-cCCHHhhcCCCCEEEEeCCCC
Q 027577 37 KTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET-----GAKF-EEDLDTMLPKCDIVVVNTPLT 103 (221)
Q Consensus 37 ~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~-----g~~~-~~~l~ell~~aDvVv~~~p~~ 103 (221)
|+|.|.| .|.||+.+++.|.+.|++|++.+|+....+..... .+.. .+++.++++++|+|+.+....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~ 74 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSG 74 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCT
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCC
Confidence 5799999 79999999999999999999999875322111110 1111 124566788999999888644
No 436
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=96.84 E-value=0.00097 Score=55.16 Aligned_cols=67 Identities=16% Similarity=0.178 Sum_probs=46.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhH-HH--hcCceecCCHHhhcCC-CCEEEEeCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQL-EK--ETGAKFEEDLDTMLPK-CDIVVVNTP 101 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~-~~--~~g~~~~~~l~ell~~-aDvVv~~~p 101 (221)
++++|.|.|.|.||+.+++.|...|++|++.+|+...... .. ...+....+++++++. +|+|+.+..
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 3679999999999999999999999999999987533110 00 0011111234456665 999987763
No 437
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=96.83 E-value=0.0015 Score=57.90 Aligned_cols=66 Identities=20% Similarity=0.293 Sum_probs=46.3
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcC--ceecCC---HHhhcCCCCEEEE
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG--AKFEED---LDTMLPKCDIVVV 98 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g--~~~~~~---l~ell~~aDvVv~ 98 (221)
-+.|+||+|+|-|.+|+.+++.++.+|++|+++|+.+..+....... +..+.+ +.++++++|+|+.
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D~V~~ 102 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCEAVST 102 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence 46899999999999999999999999999999997654432211100 111122 3445567888875
No 438
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=96.82 E-value=0.0016 Score=56.17 Aligned_cols=97 Identities=16% Similarity=0.180 Sum_probs=59.9
Q ss_pred CCCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCCCh--hHHHhc-Ccee-----c---CCHHhhcCCCCEEEEeCCC
Q 027577 35 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDP--QLEKET-GAKF-----E---EDLDTMLPKCDIVVVNTPL 102 (221)
Q Consensus 35 ~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~--~~~~~~-g~~~-----~---~~l~ell~~aDvVv~~~p~ 102 (221)
.+++|.|.| .|.+|+.+++.|...|++|++.+|+.... +..... ++.. . +++.++++.+|+|+.+...
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~ 83 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 83 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence 468899999 59999999999998999999999876443 112211 2221 1 1255678899999977653
Q ss_pred ChhhhhcchHHHHhcCCC-C--CEEEEcCCCC
Q 027577 103 TEKTRGMFDKDRIAKMKK-G--VLIVNNARGA 131 (221)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~-g--a~lIn~srg~ 131 (221)
............++.++. + ..||++|...
T Consensus 84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred CCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence 211111122333333322 3 4788877653
No 439
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=96.82 E-value=0.0037 Score=53.41 Aligned_cols=101 Identities=23% Similarity=0.316 Sum_probs=62.1
Q ss_pred CEEEEEc-cCHHHHHHHHHHcc---CCCeEEEEcCCCCChhHHH---hcC--ceec----CCHHhhcCCCCEEEEeCCCC
Q 027577 37 KTVGTVG-CGRIGKLLLQRLKP---FNCNLLYHDRVKMDPQLEK---ETG--AKFE----EDLDTMLPKCDIVVVNTPLT 103 (221)
Q Consensus 37 ~~vgIIG-~G~iG~~iA~~l~~---~G~~V~~~d~~~~~~~~~~---~~g--~~~~----~~l~ell~~aDvVv~~~p~~ 103 (221)
+||+||| .|.+|..++..|.. +..++..+|..+.....+. ... .... .+..+.+++||+|+++.+..
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ag~~ 80 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVA 80 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECCSCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeCCCC
Confidence 5899999 89999999998864 4457999998652111111 111 1111 24567889999999987532
Q ss_pred hh-----------hhhcchH--HHHhcCCCCCEEEEcCCCCccCHHHHH
Q 027577 104 EK-----------TRGMFDK--DRIAKMKKGVLIVNNARGAIMDTQAVV 139 (221)
Q Consensus 104 ~~-----------t~~~i~~--~~~~~mk~ga~lIn~srg~~vd~~al~ 139 (221)
.. +..++.. +.+....|++++++++ .++|.-..+
T Consensus 81 rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt--NPvd~~t~~ 127 (312)
T 3hhp_A 81 RKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT--NPVNTTVAI 127 (312)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS--SCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec--CcchhHHHH
Confidence 11 1111110 1233346889999995 666655544
No 440
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=96.81 E-value=0.0028 Score=54.35 Aligned_cols=66 Identities=20% Similarity=0.178 Sum_probs=47.1
Q ss_pred CCEEEEEcc-CHHHHHHHHHHccCCC-------eEEEEcCC----CCChh-----HHHh-c----CceecCCHHhhcCCC
Q 027577 36 GKTVGTVGC-GRIGKLLLQRLKPFNC-------NLLYHDRV----KMDPQ-----LEKE-T----GAKFEEDLDTMLPKC 93 (221)
Q Consensus 36 g~~vgIIG~-G~iG~~iA~~l~~~G~-------~V~~~d~~----~~~~~-----~~~~-~----g~~~~~~l~ell~~a 93 (221)
.+||+|+|. |.+|..++..|...|+ +|..+|+. ....+ .... . .+....++.+.++.|
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDA 84 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCCC
Confidence 468999997 9999999999987775 79999986 21111 1110 0 122236788999999
Q ss_pred CEEEEeCC
Q 027577 94 DIVVVNTP 101 (221)
Q Consensus 94 DvVv~~~p 101 (221)
|+|+++..
T Consensus 85 D~Vi~~ag 92 (329)
T 1b8p_A 85 DVALLVGA 92 (329)
T ss_dssp SEEEECCC
T ss_pred CEEEEeCC
Confidence 99998865
No 441
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.81 E-value=0.0023 Score=54.47 Aligned_cols=68 Identities=22% Similarity=0.237 Sum_probs=46.2
Q ss_pred CCCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCC-hhHH------HhcCceec-------CCHHhhcC--CCCEE
Q 027577 34 LEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMD-PQLE------KETGAKFE-------EDLDTMLP--KCDIV 96 (221)
Q Consensus 34 l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~------~~~g~~~~-------~~l~ell~--~aDvV 96 (221)
...++|.|.|. |.+|+.+++.|...|++|++.+|+... .+.. ...++..+ +++.++++ .+|+|
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V 87 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIV 87 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence 34679999997 999999999999999999999986522 1111 12233221 23456677 88888
Q ss_pred EEeCC
Q 027577 97 VVNTP 101 (221)
Q Consensus 97 v~~~p 101 (221)
+.+..
T Consensus 88 i~~a~ 92 (346)
T 3i6i_A 88 VSTVG 92 (346)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 77765
No 442
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.81 E-value=0.0021 Score=55.42 Aligned_cols=90 Identities=19% Similarity=0.106 Sum_probs=63.6
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCCe-EEEEcCCCCChhHHHhcC--c-ee-c-----CCHHh----hc--CCCCEEEE
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNCN-LLYHDRVKMDPQLEKETG--A-KF-E-----EDLDT----ML--PKCDIVVV 98 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~~-V~~~d~~~~~~~~~~~~g--~-~~-~-----~~l~e----ll--~~aDvVv~ 98 (221)
.|++|.|+|.|.+|...++.++.+|.+ |++.++++...+.++++. + .. . .++.+ +. ...|+|+-
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid 258 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALE 258 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEEEE
Confidence 488999999999999999999999997 999988765556555552 1 11 1 11111 11 25899999
Q ss_pred eCCCChhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 99 NTPLTEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 99 ~~p~~~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
++.. +. .-...+..++++..++.++-
T Consensus 259 ~~g~-~~----~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 259 CTGV-ES----SIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp CSCC-HH----HHHHHHHHSCTTCEEEECCC
T ss_pred CCCC-hH----HHHHHHHHhcCCCEEEEEcc
Confidence 8862 21 12456778999999998874
No 443
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=96.81 E-value=0.007 Score=54.16 Aligned_cols=111 Identities=15% Similarity=0.164 Sum_probs=66.7
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccCCCeEEE-Ec-------CCCC-Chh---HH---------------HhcCceec
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLY-HD-------RVKM-DPQ---LE---------------KETGAKFE 83 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~-~d-------~~~~-~~~---~~---------------~~~g~~~~ 83 (221)
+.++.|+||.|.|+|++|..+|+.|...|.+|++ .| +... ..+ .. ..++.+.+
T Consensus 225 G~~l~g~~v~VqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~~~a~~i 304 (449)
T 1bgv_A 225 NDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQFF 304 (449)
T ss_dssp TCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEEE
T ss_pred cCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhcccccCCEEe
Confidence 3578999999999999999999999999999875 44 3222 111 00 00122322
Q ss_pred CCHHhhc-CCCCEEEEeCCCChhhhhcchHHHHhcCC-CCCEEEEcCCCCccCHHHHHHHHHhC-Cce
Q 027577 84 EDLDTML-PKCDIVVVNTPLTEKTRGMFDKDRIAKMK-KGVLIVNNARGAIMDTQAVVDACSSG-HIA 148 (221)
Q Consensus 84 ~~l~ell-~~aDvVv~~~p~~~~t~~~i~~~~~~~mk-~ga~lIn~srg~~vd~~al~~al~~g-~i~ 148 (221)
+ .++++ -.||+++-|.. .+.|+.+....++ .|+.+|--+.-..+..++- +.|.+. .+.
T Consensus 305 ~-~~e~~~~~~Dil~P~A~-----~~~I~~~na~~l~a~g~kiV~EgAN~p~T~eA~-~~l~~~~Gi~ 365 (449)
T 1bgv_A 305 P-GEKPWGQKVDIIMPCAT-----QNDVDLEQAKKIVANNVKYYIEVANMPTTNEAL-RFLMQQPNMV 365 (449)
T ss_dssp E-TCCGGGSCCSEEECCSC-----TTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHH-HHHHHCTTCE
T ss_pred C-chhhhcCCcceeecccc-----ccccchhhHHHHHhcCCeEEEeCCCCcCCHHHH-HHHHHcCCEE
Confidence 1 22233 47998887763 3456555555554 3444554444444566664 556666 665
No 444
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=96.81 E-value=0.0038 Score=51.12 Aligned_cols=37 Identities=19% Similarity=0.340 Sum_probs=33.3
Q ss_pred CCCCCEEEEEcc-CH--HHHHHHHHHccCCCeEEEEcCCC
Q 027577 33 DLEGKTVGTVGC-GR--IGKLLLQRLKPFNCNLLYHDRVK 69 (221)
Q Consensus 33 ~l~g~~vgIIG~-G~--iG~~iA~~l~~~G~~V~~~d~~~ 69 (221)
++.||++.|.|. |. ||+++|+.|...|++|++.+++.
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 43 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE 43 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch
Confidence 588999999996 55 99999999999999999998864
No 445
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=96.79 E-value=0.0012 Score=55.83 Aligned_cols=87 Identities=15% Similarity=0.101 Sum_probs=63.6
Q ss_pred CCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhh--c-----CCCCEEEEeCCCChhhh
Q 027577 36 GKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTM--L-----PKCDIVVVNTPLTEKTR 107 (221)
Q Consensus 36 g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~el--l-----~~aDvVv~~~p~~~~t~ 107 (221)
|+ |.|+|. |.+|...++.++..|++|++.++++.+.+.++++|...+-+..+. + ...|+++-++. .+
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g-~~--- 222 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVG-DK--- 222 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSC-HH---
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCC-cH---
Confidence 45 999998 999999999999999999999988777777888886532122211 1 24678877765 11
Q ss_pred hcchHHHHhcCCCCCEEEEcCC
Q 027577 108 GMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn~sr 129 (221)
.-...++.++++..++.++.
T Consensus 223 --~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 223 --VLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp --HHHHHHHTEEEEEEEEECCC
T ss_pred --HHHHHHHHHhcCCEEEEEec
Confidence 33456778888888888864
No 446
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=96.79 E-value=0.0012 Score=56.65 Aligned_cols=90 Identities=19% Similarity=0.167 Sum_probs=62.8
Q ss_pred CCCEEEEEccC-HHHHHHHHHHccC-CCeEEEEcCCCCChhHHHhcCceec-----CC----HHhhc--CCCCEEEEeCC
Q 027577 35 EGKTVGTVGCG-RIGKLLLQRLKPF-NCNLLYHDRVKMDPQLEKETGAKFE-----ED----LDTML--PKCDIVVVNTP 101 (221)
Q Consensus 35 ~g~~vgIIG~G-~iG~~iA~~l~~~-G~~V~~~d~~~~~~~~~~~~g~~~~-----~~----l~ell--~~aDvVv~~~p 101 (221)
.|++|.|+|.| .||..+++.++.. |++|++.++++...+.+++.|.... .+ +.++. ...|+|+.++.
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 249 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNN 249 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESCC
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCceEEEECCC
Confidence 48899999998 9999999999998 9999999987655555556664321 11 22333 35788888876
Q ss_pred CChhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 102 LTEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
.... ....+..++++..++.++.
T Consensus 250 ~~~~-----~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 250 SEKT-----LSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp CHHH-----HTTGGGGEEEEEEEEECCS
T ss_pred CHHH-----HHHHHHHHhcCCEEEEECC
Confidence 2211 1234567788888888764
No 447
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=96.79 E-value=0.001 Score=57.47 Aligned_cols=87 Identities=13% Similarity=0.197 Sum_probs=49.5
Q ss_pred CEEEEEc-cCHHHHHHHHHHccC---CCeEEEEc-CCCCChh-HHHhcCceecCCH-HhhcCCCCEEEEeCCCChhhhhc
Q 027577 37 KTVGTVG-CGRIGKLLLQRLKPF---NCNLLYHD-RVKMDPQ-LEKETGAKFEEDL-DTMLPKCDIVVVNTPLTEKTRGM 109 (221)
Q Consensus 37 ~~vgIIG-~G~iG~~iA~~l~~~---G~~V~~~d-~~~~~~~-~~~~~g~~~~~~l-~ell~~aDvVv~~~p~~~~t~~~ 109 (221)
++|+|+| .|.+|+.+.+.|... .+++.++. ++..... ......+.. .++ .+.++.+|+|+.|+|... +..
T Consensus 4 ~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~-~~~~~~~~~~vDvVf~a~g~~~-s~~- 80 (336)
T 2r00_A 4 FNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRV-QNVEEFDWSQVHIALFSAGGEL-SAK- 80 (336)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEE-EEGGGCCGGGCSEEEECSCHHH-HHH-
T ss_pred cEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEE-ecCChHHhcCCCEEEECCCchH-HHH-
Confidence 5899999 999999999998765 34666554 3221110 010011111 111 123467999999998322 111
Q ss_pred chHHHHhcCCCCCEEEEcCC
Q 027577 110 FDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 110 i~~~~~~~mk~ga~lIn~sr 129 (221)
+.. ..++.|+.+|+.+.
T Consensus 81 ~a~---~~~~~G~~vId~s~ 97 (336)
T 2r00_A 81 WAP---IAAEAGVVVIDNTS 97 (336)
T ss_dssp HHH---HHHHTTCEEEECSS
T ss_pred HHH---HHHHcCCEEEEcCC
Confidence 111 22356788888764
No 448
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=96.79 E-value=0.0059 Score=54.41 Aligned_cols=84 Identities=15% Similarity=0.179 Sum_probs=62.1
Q ss_pred CCCCCEEEEEccC----------HHHHHHHHHHccC-CCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCC
Q 027577 33 DLEGKTVGTVGCG----------RIGKLLLQRLKPF-NCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTP 101 (221)
Q Consensus 33 ~l~g~~vgIIG~G----------~iG~~iA~~l~~~-G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p 101 (221)
.+.|++|+|+|+- +-...+++.|... |.+|.+|||..... ....++++.++.+|+|+++++
T Consensus 312 ~~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~~g~~V~~~DP~~~~~--------~~~~~~~~~~~~ad~vvi~t~ 383 (431)
T 3ojo_A 312 ALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD--------FVEHDMSHAVKDASLVLILSD 383 (431)
T ss_dssp HSSCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHSTTCEEEEECSSCCCT--------TBCSTTHHHHTTCSEEEECSC
T ss_pred hcCCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhhcCCEEEEECCCcccc--------cccCCHHHHHhCCCEEEEecC
Confidence 4789999999964 2478899999998 99999999864321 134678899999999999997
Q ss_pred CChhhhhcchHHHHhcCCCCCEEEEc
Q 027577 102 LTEKTRGMFDKDRIAKMKKGVLIVNN 127 (221)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~ga~lIn~ 127 (221)
-. +.+. ++.+.+..|+ +.+|+|.
T Consensus 384 ~~-~f~~-~d~~~~~~~~-~~~i~D~ 406 (431)
T 3ojo_A 384 HS-EFKN-LSDSHFDKMK-HKVIFDT 406 (431)
T ss_dssp CG-GGTS-CCGGGGTTCS-SCEEEES
T ss_pred CH-HHhc-cCHHHHHhCC-CCEEEEC
Confidence 33 3332 2333345666 6788886
No 449
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=96.78 E-value=0.0036 Score=52.78 Aligned_cols=66 Identities=15% Similarity=0.157 Sum_probs=47.2
Q ss_pred CCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCcee-------cCCHHhhcCCCCEEEEeCC
Q 027577 36 GKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKF-------EEDLDTMLPKCDIVVVNTP 101 (221)
Q Consensus 36 g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~-------~~~l~ell~~aDvVv~~~p 101 (221)
.++|.|.| .|.||+.+++.|...|++|++.+|+....+.....++.. .++++++++.+|+|+.+..
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 36899999 599999999999999999999998764433222223321 1235577889999988765
No 450
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=96.78 E-value=0.0054 Score=51.38 Aligned_cols=66 Identities=20% Similarity=0.262 Sum_probs=48.0
Q ss_pred CCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCC-ChhHH---HhcCceec-------CCHHhhcCCCCEEEEeCC
Q 027577 36 GKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKM-DPQLE---KETGAKFE-------EDLDTMLPKCDIVVVNTP 101 (221)
Q Consensus 36 g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~-~~~~~---~~~g~~~~-------~~l~ell~~aDvVv~~~p 101 (221)
.++|.|.| .|.+|+.+++.|...|++|.+.+|+.. ..... ...++..+ +++.++++.+|+|+.+.+
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~ 88 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALA 88 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 35899999 499999999999999999999998763 22211 22344321 245677888999988776
No 451
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.76 E-value=0.0019 Score=55.76 Aligned_cols=93 Identities=15% Similarity=0.204 Sum_probs=63.0
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCC-------------------hhHH----Hhc--Cc--eec
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMD-------------------PQLE----KET--GA--KFE 83 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-------------------~~~~----~~~--g~--~~~ 83 (221)
..|.+++|.|||+|.+|..+|+.|...|. ++.++|..... .+.+ .+. ++ ...
T Consensus 30 ~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~ 109 (340)
T 3rui_A 30 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV 109 (340)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence 36889999999999999999999999997 58888864311 1111 111 11 111
Q ss_pred C---------------------CHHhhcCCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcC
Q 027577 84 E---------------------DLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 84 ~---------------------~l~ell~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~s 128 (221)
. ++.++++++|+|+.|+- +.+++..++..... .+..+|+.+
T Consensus 110 ~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tD-n~~tR~lin~~c~~---~~~plI~aa 171 (340)
T 3rui_A 110 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD-SRESRWLPSLLSNI---ENKTVINAA 171 (340)
T ss_dssp CCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCS-STGGGHHHHHHHHH---TTCEEEEEE
T ss_pred eccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCC-CHHHHHHHHHHHHH---cCCcEEEee
Confidence 1 23567888999988874 66788777765543 355677764
No 452
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=96.76 E-value=0.0029 Score=52.54 Aligned_cols=67 Identities=18% Similarity=0.167 Sum_probs=47.3
Q ss_pred CCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCC-CC--h-hH------HHhcCceec-------CCHHhhcCCCCEEE
Q 027577 36 GKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVK-MD--P-QL------EKETGAKFE-------EDLDTMLPKCDIVV 97 (221)
Q Consensus 36 g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~-~~--~-~~------~~~~g~~~~-------~~l~ell~~aDvVv 97 (221)
+++|.|.|. |.+|+.+++.|...|++|.+.+|+. .. . +. ....++..+ +++.++++.+|+|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 578999995 9999999999998899999999864 11 1 11 112344321 23556778899998
Q ss_pred EeCCC
Q 027577 98 VNTPL 102 (221)
Q Consensus 98 ~~~p~ 102 (221)
.+.+.
T Consensus 82 ~~a~~ 86 (307)
T 2gas_A 82 CAAGR 86 (307)
T ss_dssp ECSSS
T ss_pred ECCcc
Confidence 87763
No 453
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=96.76 E-value=0.0021 Score=57.48 Aligned_cols=108 Identities=17% Similarity=0.149 Sum_probs=67.6
Q ss_pred CCEEEEEccCHHHHHHHHHHcc----------CCCeEE-EEcCCCCChhHHHhcCceecCCHHhhcC--CCCEEEEeCCC
Q 027577 36 GKTVGTVGCGRIGKLLLQRLKP----------FNCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPL 102 (221)
Q Consensus 36 g~~vgIIG~G~iG~~iA~~l~~----------~G~~V~-~~d~~~~~~~~~~~~g~~~~~~l~ell~--~aDvVv~~~p~ 102 (221)
-.+|||||+|.||+.+++.+.. .+.+|. ++|++....... ..+...+.+++++++ +.|+|+.++|.
T Consensus 10 ~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~-~~~~~~~~d~~ell~d~diDvVve~tp~ 88 (444)
T 3mtj_A 10 PIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEAL-AGGLPLTTNPFDVVDDPEIDIVVELIGG 88 (444)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHH-HTTCCEESCTHHHHTCTTCCEEEECCCS
T ss_pred cccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhh-cccCcccCCHHHHhcCCCCCEEEEcCCC
Confidence 3589999999999999887653 355654 456643222211 123455678999986 58999999984
Q ss_pred ChhhhhcchHHHHhcCCCCCEEEEcCCCCcc-CHHHHHHHHHhCCce
Q 027577 103 TEKTRGMFDKDRIAKMKKGVLIVNNARGAIM-DTQAVVDACSSGHIA 148 (221)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~lIn~srg~~v-d~~al~~al~~g~i~ 148 (221)
...... -....|+.|..++..-.+-.. ..+.|.++.++.+..
T Consensus 89 ~~~h~~----~~~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~ 131 (444)
T 3mtj_A 89 LEPARE----LVMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVM 131 (444)
T ss_dssp STTHHH----HHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCC
T ss_pred chHHHH----HHHHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCe
Confidence 221111 123556778888866442222 235677777776665
No 454
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=96.76 E-value=0.0014 Score=56.39 Aligned_cols=89 Identities=12% Similarity=0.060 Sum_probs=62.0
Q ss_pred CCCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec-----CCHH----hhc--CCCCEEEEeCCC
Q 027577 35 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLD----TML--PKCDIVVVNTPL 102 (221)
Q Consensus 35 ~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~----ell--~~aDvVv~~~p~ 102 (221)
.|++|.|+| .|.||..+++.++..|++|++.++++...+.++++|.... .+.. +.. ...|+++.++..
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~ 241 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGG 241 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCG
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCCc
Confidence 589999999 7999999999999999999999987654555555554321 1111 122 247888887762
Q ss_pred ChhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 103 TEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
+ .....+..|+++..++.++.
T Consensus 242 -~-----~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 242 -S-----YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp -G-----GHHHHHHHEEEEEEEEECCC
T ss_pred -h-----HHHHHHHhccCCCEEEEEec
Confidence 1 12345677888888888764
No 455
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.76 E-value=0.0015 Score=57.09 Aligned_cols=95 Identities=15% Similarity=0.141 Sum_probs=65.0
Q ss_pred CCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhcCceecC----C-HHhhc------CCCCEEEEeCCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFEE----D-LDTML------PKCDIVVVNTPL 102 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~~----~-l~ell------~~aDvVv~~~p~ 102 (221)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++...+.++++|+..++ + +.+.+ ...|+|+-++..
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~ 264 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGF 264 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECCCT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCCEEEECCCC
Confidence 58899999999999999999999999 699999876666777777865321 1 22222 247888888763
Q ss_pred Chhh----------hhcchHHHHhcCCCCCEEEEcCC
Q 027577 103 TEKT----------RGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 103 ~~~t----------~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
.... ..-.-.+.+..++++..++.++-
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 265 EARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp TCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred cccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 2100 00012355677788888877763
No 456
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=96.75 E-value=0.0012 Score=56.73 Aligned_cols=90 Identities=16% Similarity=0.109 Sum_probs=62.6
Q ss_pred CCCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec---CCHHhhc------CCCCEEEEeCCCCh
Q 027577 35 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE---EDLDTML------PKCDIVVVNTPLTE 104 (221)
Q Consensus 35 ~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~---~~l~ell------~~aDvVv~~~p~~~ 104 (221)
.|++|.|+| .|.+|...++.++..|++|++. .++...+.++++|...+ .++.+.+ ...|+|+-++.. +
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~i~~~~~~~~~~~~~~~~~g~D~vid~~g~-~ 227 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVYDTLGG-P 227 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEEEETTSCHHHHHHHHHTTSCEEEEEESSCT-H
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCEeccCCCHHHHHHHHhcCCCceEEEECCCc-H
Confidence 589999999 7999999999999999999988 55545556666676542 1222222 257888887762 1
Q ss_pred hhhhcchHHHHhcCCCCCEEEEcCCCC
Q 027577 105 KTRGMFDKDRIAKMKKGVLIVNNARGA 131 (221)
Q Consensus 105 ~t~~~i~~~~~~~mk~ga~lIn~srg~ 131 (221)
.....+..|+++..++.++-..
T Consensus 228 -----~~~~~~~~l~~~G~iv~~g~~~ 249 (343)
T 3gaz_A 228 -----VLDASFSAVKRFGHVVSCLGWG 249 (343)
T ss_dssp -----HHHHHHHHEEEEEEEEESCCCS
T ss_pred -----HHHHHHHHHhcCCeEEEEcccC
Confidence 2234566778888888775433
No 457
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.75 E-value=0.0012 Score=56.02 Aligned_cols=89 Identities=17% Similarity=0.125 Sum_probs=58.9
Q ss_pred CCCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHh----hc--CCCCEEEEeCCC
Q 027577 35 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDT----ML--PKCDIVVVNTPL 102 (221)
Q Consensus 35 ~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e----ll--~~aDvVv~~~p~ 102 (221)
.|++|.|+| .|.||..+++.++..|++|++.++++...+.+++.|.... .+..+ .. ...|+|+.++.
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g- 218 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVG- 218 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSC-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCc-
Confidence 489999999 7999999999999999999999986544445555554211 11111 11 13677777765
Q ss_pred ChhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 103 TEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
.. .....+..|+++..++.++.
T Consensus 219 -~~----~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 219 -RD----TWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp -GG----GHHHHHHTEEEEEEEEECCC
T ss_pred -hH----HHHHHHHHhcCCCEEEEEec
Confidence 11 22445666777777777653
No 458
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=96.75 E-value=0.0077 Score=53.08 Aligned_cols=68 Identities=16% Similarity=0.318 Sum_probs=52.4
Q ss_pred CCCCCEEEEEcc-----C---HHHHHHHHHHccCCCeEEEEcCCCC--ChhHH-------HhcCc--eecCCHHhhcCCC
Q 027577 33 DLEGKTVGTVGC-----G---RIGKLLLQRLKPFNCNLLYHDRVKM--DPQLE-------KETGA--KFEEDLDTMLPKC 93 (221)
Q Consensus 33 ~l~g~~vgIIG~-----G---~iG~~iA~~l~~~G~~V~~~d~~~~--~~~~~-------~~~g~--~~~~~l~ell~~a 93 (221)
.|.|+||+|+|- | ++.++++..+..+|++|.+..|... .++.. +..|. ....+++++++++
T Consensus 188 ~l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~d~~eav~~a 267 (399)
T 3q98_A 188 NLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDA 267 (399)
T ss_dssp GGTTCEEEEECCCCSSCCCCTHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTC
T ss_pred ccCCCEEEEEEecccccCcchHHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhCCC
Confidence 378999999973 4 7999999999999999999988632 22222 23353 4568999999999
Q ss_pred CEEEEeC
Q 027577 94 DIVVVNT 100 (221)
Q Consensus 94 DvVv~~~ 100 (221)
|+|..-+
T Consensus 268 DvVytd~ 274 (399)
T 3q98_A 268 DIVYPKS 274 (399)
T ss_dssp SEEEECC
T ss_pred CEEEecC
Confidence 9998754
No 459
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=96.75 E-value=0.002 Score=53.05 Aligned_cols=66 Identities=15% Similarity=0.234 Sum_probs=48.1
Q ss_pred CEEEEEcc-CHHHHHHHHHHccC--CCeEEEEcCCCCChhHHHhcCcee-------cCCHHhhcCCCCEEEEeCCC
Q 027577 37 KTVGTVGC-GRIGKLLLQRLKPF--NCNLLYHDRVKMDPQLEKETGAKF-------EEDLDTMLPKCDIVVVNTPL 102 (221)
Q Consensus 37 ~~vgIIG~-G~iG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~g~~~-------~~~l~ell~~aDvVv~~~p~ 102 (221)
|+|.|.|. |.||+.+++.|... |++|.+.+|+..........++.. .++++++++.+|+|+.+...
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 76 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGP 76 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCC
Confidence 57889996 99999999999988 999999998764433322233321 12456778899999877653
No 460
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.75 E-value=0.0012 Score=56.54 Aligned_cols=90 Identities=16% Similarity=0.103 Sum_probs=64.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHccC-CCeEEEEcCCCCChhHHHhcCceec----CCHHh----hc--CCCCEEEEeCCCC
Q 027577 35 EGKTVGTVGCGRIGKLLLQRLKPF-NCNLLYHDRVKMDPQLEKETGAKFE----EDLDT----ML--PKCDIVVVNTPLT 103 (221)
Q Consensus 35 ~g~~vgIIG~G~iG~~iA~~l~~~-G~~V~~~d~~~~~~~~~~~~g~~~~----~~l~e----ll--~~aDvVv~~~p~~ 103 (221)
.|.+|.|+|.|.+|...++.++.. |.+|++.++++...+.++++|+..+ .++.+ +. ...|+|+-++..
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~G~- 249 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGA- 249 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESSCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECCCC-
Confidence 588999999999999999999887 7899999987766677777776432 12222 11 157888888762
Q ss_pred hhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 104 EKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
+. .-...+..++++..++.++-
T Consensus 250 ~~----~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 250 QS----TIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp HH----HHHHHHHHEEEEEEEEECSC
T ss_pred HH----HHHHHHHHHhcCCEEEEECC
Confidence 21 22345667788888887753
No 461
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=96.74 E-value=0.0016 Score=58.04 Aligned_cols=112 Identities=14% Similarity=0.164 Sum_probs=70.0
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCCh--hHHHhcCceec--CCHHhhcCCCCEEEEeCCC---Chh
Q 027577 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDP--QLEKETGAKFE--EDLDTMLPKCDIVVVNTPL---TEK 105 (221)
Q Consensus 33 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~--~~~~~~g~~~~--~~l~ell~~aDvVv~~~p~---~~~ 105 (221)
++.+|+|.|||+|..|.+.|+.|...|++|.++|.+.... .... .|+... ....+.++.+|.|++.... .|.
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~~~~~~~~~~d~vV~s~gi~~~~p~ 80 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTGSLNDEWLMAADLIVASPGIALAHPS 80 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEESSCCHHHHHTCSEEEECTTSCTTCHH
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEECCCcHHHhccCCEEEeCCCCCCCCHH
Confidence 3678999999999999999999999999999999765332 2233 465432 1124556689999887432 232
Q ss_pred hhh-------cchH-HHH-hcCCCCCEEEEcCCCCccCHHHHHHHHHhC
Q 027577 106 TRG-------MFDK-DRI-AKMKKGVLIVNNARGAIMDTQAVVDACSSG 145 (221)
Q Consensus 106 t~~-------~i~~-~~~-~~mk~ga~lIn~srg~~vd~~al~~al~~g 145 (221)
... ++.+ +.+ ..++...+-|--+.|+--...-+...|+..
T Consensus 81 ~~~a~~~~~~v~~~~~~~~~~~~~~vI~VTGTnGKTTT~~ml~~iL~~~ 129 (439)
T 2x5o_A 81 LSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAA 129 (439)
T ss_dssp HHHHHHTTCEEECHHHHHHHHCCSCEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCcEEEHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhc
Confidence 211 2221 122 224434455655677766555566666654
No 462
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=96.74 E-value=0.0044 Score=51.83 Aligned_cols=38 Identities=21% Similarity=0.179 Sum_probs=34.1
Q ss_pred cCCCCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCC
Q 027577 32 YDLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVK 69 (221)
Q Consensus 32 ~~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~ 69 (221)
.++.||++.|.|. |.||+++|+.|...|++|++.+++.
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~ 81 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDE 81 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4689999999994 8899999999999999999998865
No 463
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.74 E-value=0.0043 Score=52.28 Aligned_cols=107 Identities=10% Similarity=0.147 Sum_probs=74.9
Q ss_pred CCCCEEEEEccCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCCh---------
Q 027577 34 LEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTE--------- 104 (221)
Q Consensus 34 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~--------- 104 (221)
+.|++|.++|........++.|...|++|........ .....|.....++.+.++++|+|+...|...
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~---~~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~ 81 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQL---DHGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVF 81 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCTTS---SCCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSS
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEecccc---ccccccceeccchHHHHhcCCEEEeccccccCCccccccc
Confidence 6789999999999999999999999999987753211 1112344445567778889999987444221
Q ss_pred -hhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCce
Q 027577 105 -KTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (221)
Q Consensus 105 -~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~ 148 (221)
.+...++++.++.++++.+|+ + + +|..++.+++.+.++.
T Consensus 82 a~~~~~~~~~~l~~~~~l~~i~-~---g-~~~~d~~~~~~~~gi~ 121 (300)
T 2rir_A 82 SNEEVVLKQDHLDRTPAHCVIF-S---G-ISNAYLENIAAQAKRK 121 (300)
T ss_dssp CSSCEECCHHHHHTSCTTCEEE-E---S-SCCHHHHHHHHHTTCC
T ss_pred ccCCccchHHHHhhcCCCCEEE-E---e-cCCHHHHHHHHHCCCE
Confidence 122236788889999988887 2 2 2667766777777776
No 464
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=96.74 E-value=0.00088 Score=59.83 Aligned_cols=88 Identities=19% Similarity=0.143 Sum_probs=64.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecC---C-----------------------HH
Q 027577 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEE---D-----------------------LD 87 (221)
Q Consensus 35 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~---~-----------------------l~ 87 (221)
.|.+|.|+|. |.+|...++.++..|++|++.++++...+.++++|+..+- + +.
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~ 307 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIR 307 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHH
Confidence 5899999998 9999999999999999999888766566677777764321 1 11
Q ss_pred hhc--CCCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcC
Q 027577 88 TML--PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 88 ell--~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~s 128 (221)
++. ...|+|+-++.. + .-...+..++++..++.++
T Consensus 308 ~~t~g~g~Dvvid~~G~-~-----~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 308 ELTGGEDIDIVFEHPGR-E-----TFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHTSCCEEEEEECSCH-H-----HHHHHHHHEEEEEEEEESC
T ss_pred HHhCCCCCcEEEEcCCc-h-----hHHHHHHHhhCCcEEEEEe
Confidence 112 368999988862 1 2244566788888888876
No 465
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=96.73 E-value=0.0047 Score=53.14 Aligned_cols=89 Identities=17% Similarity=0.077 Sum_probs=62.2
Q ss_pred CC-CEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCC----hhHHHhcCceecCC--------HHhhc--------CC
Q 027577 35 EG-KTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMD----PQLEKETGAKFEED--------LDTML--------PK 92 (221)
Q Consensus 35 ~g-~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~----~~~~~~~g~~~~~~--------l~ell--------~~ 92 (221)
.| .+|.|+|. |.+|...++.++.+|++|++..++... .+.++++|+..+-+ +.+.+ ..
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g 245 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGE 245 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCC
Confidence 47 89999998 999999999999999998888755443 34556677643211 11111 25
Q ss_pred CCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 93 CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 93 aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
+|+|+-++.. +. .. ..+..++++..++.++.
T Consensus 246 ~Dvvid~~G~-~~----~~-~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 246 AKLALNCVGG-KS----ST-GIARKLNNNGLMLTYGG 276 (364)
T ss_dssp EEEEEESSCH-HH----HH-HHHHTSCTTCEEEECCC
T ss_pred ceEEEECCCc-hh----HH-HHHHHhccCCEEEEecC
Confidence 8999988861 11 12 45788899988888764
No 466
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=96.72 E-value=0.0035 Score=52.09 Aligned_cols=66 Identities=17% Similarity=0.056 Sum_probs=48.8
Q ss_pred CCEEEEEcc-CHHHHHHHHHHccCC-CeEEEEcCCCCChh--HHHhcCceec-------CCHHhhcCCCCEEEEeCC
Q 027577 36 GKTVGTVGC-GRIGKLLLQRLKPFN-CNLLYHDRVKMDPQ--LEKETGAKFE-------EDLDTMLPKCDIVVVNTP 101 (221)
Q Consensus 36 g~~vgIIG~-G~iG~~iA~~l~~~G-~~V~~~d~~~~~~~--~~~~~g~~~~-------~~l~ell~~aDvVv~~~p 101 (221)
.|+|.|.|. |.+|+.+++.|.+.| ++|.+.+|++.... .....++..+ ++++++++.+|+|+.+.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 579999996 999999999998888 99999998764431 1222344321 245567889999998875
No 467
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=96.71 E-value=0.0016 Score=55.35 Aligned_cols=86 Identities=16% Similarity=0.133 Sum_probs=60.0
Q ss_pred EEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec---CCH-Hhhc-----CCCCEEEEeCCCChhhh
Q 027577 38 TVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE---EDL-DTML-----PKCDIVVVNTPLTEKTR 107 (221)
Q Consensus 38 ~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~---~~l-~ell-----~~aDvVv~~~p~~~~t~ 107 (221)
+|.|+|. |.+|...++.++..|++|++.++++...+.++++|...+ .+. .+.+ ...|+|+-++.. +
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~-~--- 227 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGG-R--- 227 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTT-T---
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcH-H---
Confidence 7999997 999999999999999999999988777777777775421 111 1111 236788777752 1
Q ss_pred hcchHHHHhcCCCCCEEEEcCC
Q 027577 108 GMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn~sr 129 (221)
.-...+..++++..++.++.
T Consensus 228 --~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 228 --TLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp --THHHHHHTEEEEEEEEECSC
T ss_pred --HHHHHHHhhccCCEEEEEee
Confidence 12355677788777777753
No 468
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=96.71 E-value=0.0022 Score=54.00 Aligned_cols=69 Identities=13% Similarity=0.063 Sum_probs=49.0
Q ss_pred CCCCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh-------cCcee--------cCCHHhhcCCCCEE
Q 027577 33 DLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-------TGAKF--------EEDLDTMLPKCDIV 96 (221)
Q Consensus 33 ~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-------~g~~~--------~~~l~ell~~aDvV 96 (221)
.+.+++|.|.|. |.||+.+++.|...|++|++.+|+....+.... .++.. ..+++++++.+|+|
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 467999999996 999999999999999999999986422211110 12211 13455677789999
Q ss_pred EEeCC
Q 027577 97 VVNTP 101 (221)
Q Consensus 97 v~~~p 101 (221)
+.+..
T Consensus 88 ih~A~ 92 (342)
T 1y1p_A 88 AHIAS 92 (342)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 88764
No 469
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=96.71 E-value=0.005 Score=53.33 Aligned_cols=89 Identities=13% Similarity=0.013 Sum_probs=62.3
Q ss_pred CCCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHhhc-----CCCCEEEEeCCC
Q 027577 34 LEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTML-----PKCDIVVVNTPL 102 (221)
Q Consensus 34 l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell-----~~aDvVv~~~p~ 102 (221)
-.|.+|.|+|. |.+|...++.++..|++|++.. ++.+.+.++++|+..+ .++.+.+ ...|+|+-++..
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~ 241 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITN 241 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCS
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCc
Confidence 46899999999 8999999999999999988875 4556677778876422 1222222 238999888762
Q ss_pred ChhhhhcchHHHHhcC-CCCCEEEEcC
Q 027577 103 TEKTRGMFDKDRIAKM-KKGVLIVNNA 128 (221)
Q Consensus 103 ~~~t~~~i~~~~~~~m-k~ga~lIn~s 128 (221)
+.+ -...+..+ +++..++.++
T Consensus 242 -~~~----~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 242 -VES----TTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp -HHH----HHHHHHHSCTTCEEEEESS
T ss_pred -hHH----HHHHHHHhhcCCCEEEEEe
Confidence 211 23455667 5788888775
No 470
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.70 E-value=0.0079 Score=49.55 Aligned_cols=74 Identities=18% Similarity=0.279 Sum_probs=47.2
Q ss_pred CEEEEEcc-CHHHHHHHHHHccC-CCeEE-EEcCCCCChhHHHhcCceecCCHHhhcC-CCCEEEEeCCCChhhhhcchH
Q 027577 37 KTVGTVGC-GRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLP-KCDIVVVNTPLTEKTRGMFDK 112 (221)
Q Consensus 37 ~~vgIIG~-G~iG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~g~~~~~~l~ell~-~aDvVv~~~p~~~~t~~~i~~ 112 (221)
++|+|+|+ |.||+.+++.+... ++++. ++|+. +++++++. .+|+|+-+++ |+. ...
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~---------------~dl~~~~~~~~DvvIDfT~--p~a---~~~ 60 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG---------------DPLSLLTDGNTEVVIDFTH--PDV---VMG 60 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT---------------CCTHHHHHTTCCEEEECSC--TTT---HHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC---------------CCHHHHhccCCcEEEEccC--hHH---HHH
Confidence 48999996 99999999998755 88876 45552 24555553 7899986654 221 111
Q ss_pred HHHhcCCCCCEEEEcCCC
Q 027577 113 DRIAKMKKGVLIVNNARG 130 (221)
Q Consensus 113 ~~~~~mk~ga~lIn~srg 130 (221)
-....++.|.-+|-.+.|
T Consensus 61 ~~~~a~~~g~~~VigTTG 78 (245)
T 1p9l_A 61 NLEFLIDNGIHAVVGTTG 78 (245)
T ss_dssp HHHHHHHTTCEEEECCCC
T ss_pred HHHHHHHcCCCEEEcCCC
Confidence 122234556666665566
No 471
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=96.69 E-value=0.004 Score=53.90 Aligned_cols=87 Identities=17% Similarity=0.296 Sum_probs=51.2
Q ss_pred CEEEEEc-cCHHHHHHHHHHccCC-CeEEEEc--CCCCChhHHHh-------------cCceec-CCHHhhcCCCCEEEE
Q 027577 37 KTVGTVG-CGRIGKLLLQRLKPFN-CNLLYHD--RVKMDPQLEKE-------------TGAKFE-EDLDTMLPKCDIVVV 98 (221)
Q Consensus 37 ~~vgIIG-~G~iG~~iA~~l~~~G-~~V~~~d--~~~~~~~~~~~-------------~g~~~~-~~l~ell~~aDvVv~ 98 (221)
.+|||+| .|.+|+.+++.|.... +++.++. ++......... ...... .+.++ ++++|+|++
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~vDvVf~ 83 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HKDVDVVLS 83 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GTTCSEEEE
T ss_pred cEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hcCCCEEEE
Confidence 5899999 8999999999997653 5666663 21111111110 111111 13444 478999999
Q ss_pred eCCCChhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 99 NTPLTEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 99 ~~p~~~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
|+|... +.. +.. ..++.|+.+|+.+.
T Consensus 84 atp~~~-s~~-~a~---~~~~aG~~VId~s~ 109 (350)
T 2ep5_A 84 ALPNEL-AES-IEL---ELVKNGKIVVSNAS 109 (350)
T ss_dssp CCCHHH-HHH-HHH---HHHHTTCEEEECSS
T ss_pred CCChHH-HHH-HHH---HHHHCCCEEEECCc
Confidence 998321 111 222 22456888998874
No 472
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=96.68 E-value=0.0022 Score=54.34 Aligned_cols=72 Identities=13% Similarity=0.078 Sum_probs=46.2
Q ss_pred ccCCCCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhH-HHhcCceecCCHHhhcCCCCEEEEeCCC
Q 027577 31 AYDLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQL-EKETGAKFEEDLDTMLPKCDIVVVNTPL 102 (221)
Q Consensus 31 ~~~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~-~~~~g~~~~~~l~ell~~aDvVv~~~p~ 102 (221)
...+.+|+|.|.|. |.||+.+++.|...|++|++.+++...... .....+....+++++++.+|+|+.+...
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~ 87 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAF 87 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCCCEEEECCcc
Confidence 45788999999996 999999999999999999999987533100 0000111123456778899999877653
No 473
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=96.67 E-value=0.0018 Score=54.99 Aligned_cols=86 Identities=14% Similarity=0.110 Sum_probs=63.1
Q ss_pred EEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhh----c-----CCCCEEEEeCCCChhhh
Q 027577 38 TVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTM----L-----PKCDIVVVNTPLTEKTR 107 (221)
Q Consensus 38 ~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~el----l-----~~aDvVv~~~p~~~~t~ 107 (221)
+|.|+|. |.+|...++.++..|++|++.++++...+.++++|...+-+..+. + ...|+|+-++.. +
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g~-~--- 228 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGG-K--- 228 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCT-H---
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCcH-H---
Confidence 7999997 999999999999999999999988777777777776432222211 1 246888888762 2
Q ss_pred hcchHHHHhcCCCCCEEEEcCC
Q 027577 108 GMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 108 ~~i~~~~~~~mk~ga~lIn~sr 129 (221)
.-.+.+..++++..++.++-
T Consensus 229 --~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 229 --QLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp --HHHHHHTTEEEEEEEEECCC
T ss_pred --HHHHHHHhhcCCCEEEEEec
Confidence 12456778888888888764
No 474
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=96.67 E-value=0.0025 Score=52.74 Aligned_cols=38 Identities=21% Similarity=0.058 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcc---CHHHHHHHHHHccCCCeEEEEcCCCC
Q 027577 33 DLEGKTVGTVGC---GRIGKLLLQRLKPFNCNLLYHDRVKM 70 (221)
Q Consensus 33 ~l~g~~vgIIG~---G~iG~~iA~~l~~~G~~V~~~d~~~~ 70 (221)
.+.||++.|.|. |.||+.+|+.|...|++|++.+|+..
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~ 43 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES 43 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 478999999997 69999999999999999999998754
No 475
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=96.67 E-value=0.002 Score=55.10 Aligned_cols=89 Identities=18% Similarity=0.134 Sum_probs=58.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec-----CCHH----hhc--CCCCEEEEeCCC
Q 027577 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLD----TML--PKCDIVVVNTPL 102 (221)
Q Consensus 35 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~----ell--~~aDvVv~~~p~ 102 (221)
.|++|.|+|. |.+|..+++.++..|++|++.++++...+.+++.|...+ .++. ++. ...|+|+.++.
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g- 244 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTG- 244 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEEESSC-
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC-
Confidence 5899999998 999999999999999999999986544455555554211 1111 111 24677776665
Q ss_pred ChhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 103 TEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
.+ .....+..|+++..++.++.
T Consensus 245 ~~-----~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 245 AL-----YFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp SS-----SHHHHHHHEEEEEEEEESSC
T ss_pred HH-----HHHHHHHhhccCCEEEEEec
Confidence 21 12345556666666666653
No 476
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.66 E-value=0.0021 Score=55.40 Aligned_cols=31 Identities=23% Similarity=0.387 Sum_probs=25.3
Q ss_pred CEEEEEccCHHHHHHHHHHccC---CCeEEEEcC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF---NCNLLYHDR 67 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~---G~~V~~~d~ 67 (221)
.+|||+|+|.||+.+.+.|... .++|.+.+.
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~ 34 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAIND 34 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEc
Confidence 4799999999999999998654 478776643
No 477
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.66 E-value=0.0011 Score=52.67 Aligned_cols=66 Identities=17% Similarity=0.134 Sum_probs=47.5
Q ss_pred CEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCce-------ecCCHHhhcCCCCEEEEeCCCC
Q 027577 37 KTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAK-------FEEDLDTMLPKCDIVVVNTPLT 103 (221)
Q Consensus 37 ~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~-------~~~~l~ell~~aDvVv~~~p~~ 103 (221)
++|.|.| .|.||+.+++.|...|++|++.+|++....... .++. ..++++++++.+|+|+.+....
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~ 78 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN-EHLKVKKADVSSLDEVCEVCKGADAVISAFNPG 78 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC-TTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc-CceEEEEecCCCHHHHHHHhcCCCEEEEeCcCC
Confidence 6899999 599999999999999999999998753221110 1121 1134567888999999887543
No 478
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.65 E-value=0.0033 Score=53.60 Aligned_cols=91 Identities=18% Similarity=0.115 Sum_probs=65.3
Q ss_pred CCCCEEEEEccCHHHHHHHHHHccCCCe-EEEEcCCCCChhHHHhcCceec-----CCHHhhc------CCCCEEEEeCC
Q 027577 34 LEGKTVGTVGCGRIGKLLLQRLKPFNCN-LLYHDRVKMDPQLEKETGAKFE-----EDLDTML------PKCDIVVVNTP 101 (221)
Q Consensus 34 l~g~~vgIIG~G~iG~~iA~~l~~~G~~-V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell------~~aDvVv~~~p 101 (221)
..|++|.|+|.|.+|...++.++.+|.+ +++.++++.+.+.++++|...+ .+..+.. ...|+|+-++.
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v~d~~G 238 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAG 238 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEEEECSC
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCccccccccc
Confidence 4589999999999999999999999987 5678887666677788886432 2222222 34788887775
Q ss_pred CChhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 102 LTEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
.+.+ -...++.++++..++.++-
T Consensus 239 -~~~~----~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 239 -VPQT----VELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp -SHHH----HHHHHHHCCTTCEEEECCC
T ss_pred -ccch----hhhhhheecCCeEEEEEec
Confidence 2222 2345678899999888764
No 479
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=96.65 E-value=0.004 Score=52.82 Aligned_cols=70 Identities=23% Similarity=0.203 Sum_probs=50.2
Q ss_pred CCCCCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCCChh-HHH---h-------cCcee-------cCCHHhhcCCC
Q 027577 33 DLEGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQ-LEK---E-------TGAKF-------EEDLDTMLPKC 93 (221)
Q Consensus 33 ~l~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~-~~~---~-------~g~~~-------~~~l~ell~~a 93 (221)
.+.+|+|.|.| .|.||+.+++.|...|++|++.+|+..... ... . .++.. .++++++++.+
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 46789999999 599999999999999999999998653321 111 1 12221 12356778899
Q ss_pred CEEEEeCCC
Q 027577 94 DIVVVNTPL 102 (221)
Q Consensus 94 DvVv~~~p~ 102 (221)
|+|+.+...
T Consensus 102 d~Vih~A~~ 110 (351)
T 3ruf_A 102 DHVLHQAAL 110 (351)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCcc
Confidence 999887753
No 480
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=96.65 E-value=0.014 Score=52.24 Aligned_cols=135 Identities=12% Similarity=0.106 Sum_probs=88.4
Q ss_pred ccCCCCCEEEEEccCHHHHHHHHHHccCCC---eEEEEcCCC----CChhH------------HHhcCceecCCHHhhcC
Q 027577 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC---NLLYHDRVK----MDPQL------------EKETGAKFEEDLDTMLP 91 (221)
Q Consensus 31 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~---~V~~~d~~~----~~~~~------------~~~~g~~~~~~l~ell~ 91 (221)
+..|...||.|.|.|..|..+|+.+...|. +++.+|+.. ...+. ++..+-....+|.|+++
T Consensus 214 gk~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~~~~~~L~eav~ 293 (487)
T 3nv9_A 214 KKDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNPSKFGSIAEACV 293 (487)
T ss_dssp TCCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCTTCCCSHHHHHT
T ss_pred CCChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEeccccccCCcchhhhhcccHHHHHHHHhcccccCCCHHHHHh
Confidence 567889999999999999999999999998 699999863 11111 11111112358999999
Q ss_pred CCCEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCCCC
Q 027577 92 KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPN 171 (221)
Q Consensus 92 ~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~vd~~al~~al~~g~i~~a~lDV~~~ep~~~~~~l~~~~n 171 (221)
.+|+++=+.. . ..+.+.++.++.|.+..+|.-.|.-.. |-.=.++.+.|... .+.= ..+.| =+..|
T Consensus 294 ~adVlIG~S~--~-~pg~ft~e~V~~Ma~~PIIFaLSNPtp--Ei~pe~A~~~G~aI-vATG---rsd~P-----nQ~NN 359 (487)
T 3nv9_A 294 GADVLISLST--P-GPGVVKAEWIKSMGEKPIVFCCANPVP--EIYPYEAKEAGAYI-VATG---RGDFP-----NQVNN 359 (487)
T ss_dssp TCSEEEECCC--S-SCCCCCHHHHHTSCSSCEEEECCSSSC--SSCHHHHHHTTCSE-EEES---CTTSS-----SBCCG
T ss_pred cCCEEEEecc--c-CCCCCCHHHHHhhcCCCEEEECCCCCc--cCCHHHHHHhCCEE-EEEC---CCCCc-----ccCcc
Confidence 9997764431 1 136899999999999999999887654 21112233356533 2221 11111 24567
Q ss_pred eEECCCCC
Q 027577 172 QAMTPHVS 179 (221)
Q Consensus 172 ~~~tPH~a 179 (221)
+++-|-++
T Consensus 360 ~liFPGI~ 367 (487)
T 3nv9_A 360 SVGFPGIL 367 (487)
T ss_dssp GGTHHHHH
T ss_pred eeEcchhh
Confidence 88777664
No 481
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=96.64 E-value=0.0015 Score=56.27 Aligned_cols=88 Identities=14% Similarity=0.170 Sum_probs=57.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHh----hcC--CCCEEEEeCCC
Q 027577 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDT----MLP--KCDIVVVNTPL 102 (221)
Q Consensus 35 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e----ll~--~aDvVv~~~p~ 102 (221)
.|++|.|+|. |.+|..+++.++..|++|++.++++...+.+++.|.... .+..+ ... ..|+|+.++..
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G~ 249 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLAN 249 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHH
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECCCh
Confidence 4889999997 999999999999999999999987544455555554311 11111 111 46777666541
Q ss_pred ChhhhhcchHHHHhcCCCCCEEEEcC
Q 027577 103 TEKTRGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~lIn~s 128 (221)
. .+ ...+..++++..++.++
T Consensus 250 --~---~~-~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 250 --V---NL-SKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp --H---HH-HHHHHHEEEEEEEEECC
T ss_pred --H---HH-HHHHHhccCCCEEEEEe
Confidence 1 11 33456666666666665
No 482
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=96.62 E-value=0.003 Score=52.54 Aligned_cols=67 Identities=16% Similarity=0.220 Sum_probs=48.5
Q ss_pred CCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCC---hhHH------HhcCceec-------CCHHhhcCCCCEEEE
Q 027577 36 GKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMD---PQLE------KETGAKFE-------EDLDTMLPKCDIVVV 98 (221)
Q Consensus 36 g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~---~~~~------~~~g~~~~-------~~l~ell~~aDvVv~ 98 (221)
.++|.|.|. |.+|+.+++.|...|++|++.+|+... .+.. ...++..+ +++.++++.+|+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 478999995 999999999999999999999986432 1111 12344321 235667889999998
Q ss_pred eCCC
Q 027577 99 NTPL 102 (221)
Q Consensus 99 ~~p~ 102 (221)
+.+.
T Consensus 84 ~a~~ 87 (308)
T 1qyc_A 84 TVGS 87 (308)
T ss_dssp CCCG
T ss_pred CCcc
Confidence 8763
No 483
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=96.61 E-value=0.0064 Score=54.56 Aligned_cols=106 Identities=12% Similarity=0.181 Sum_probs=72.0
Q ss_pred CCCCEEEEEccC----HHHHHHHHHHccCC-CeEEEEcCCCCChhHHHhcCceecCCHHhhcCCCCEEEEeCCCChhhhh
Q 027577 34 LEGKTVGTVGCG----RIGKLLLQRLKPFN-CNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRG 108 (221)
Q Consensus 34 l~g~~vgIIG~G----~iG~~iA~~l~~~G-~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVv~~~p~~~~t~~ 108 (221)
++-++|+|||.+ ++|+.+++.++..| ..|+.+++... + -.|+..+.+++++-...|++++++|. +....
T Consensus 6 ~~p~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~~~--~---i~G~~~y~sl~~lp~~~Dlavi~vp~-~~~~~ 79 (457)
T 2csu_A 6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEE--E---VQGVKAYKSVKDIPDEIDLAIIVVPK-RFVKD 79 (457)
T ss_dssp TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCS--E---ETTEECBSSTTSCSSCCSEEEECSCH-HHHHH
T ss_pred cCCCeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCCCC--e---ECCEeccCCHHHcCCCCCEEEEecCH-HHHHH
Confidence 567899999987 89999999999885 77888887532 1 24777778899988889999999992 23333
Q ss_pred cchHHHHhcCCCCCEEEEcCCCC--ccC-----HHHHHHHHHhCCce
Q 027577 109 MFDKDRIAKMKKGVLIVNNARGA--IMD-----TQAVVDACSSGHIA 148 (221)
Q Consensus 109 ~i~~~~~~~mk~ga~lIn~srg~--~vd-----~~al~~al~~g~i~ 148 (221)
++. +..+. .-. .+|..+.|= .-+ ++.+.+..++..+.
T Consensus 80 ~v~-e~~~~-Gi~-~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~ 123 (457)
T 2csu_A 80 TLI-QCGEK-GVK-GVVIITAGFGETGEEGKREEKELVEIAHKYGMR 123 (457)
T ss_dssp HHH-HHHHH-TCC-EEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCE
T ss_pred HHH-HHHHc-CCC-EEEEecCCCCccccccHHHHHHHHHHHHHcCCE
Confidence 333 22221 222 344444432 223 66788888776666
No 484
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=96.60 E-value=0.0017 Score=55.34 Aligned_cols=46 Identities=11% Similarity=0.249 Sum_probs=37.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCc
Q 027577 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (221)
Q Consensus 35 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (221)
.|++|.|+|. |.||..+++.++..|++|++.+++....+.+++.|.
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~ 191 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGC 191 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC
Confidence 4889999995 999999999999999999999986544444444443
No 485
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=96.59 E-value=0.0064 Score=55.42 Aligned_cols=113 Identities=13% Similarity=0.109 Sum_probs=72.8
Q ss_pred CCCCEEEEEccCHHHHH-HHHHHccCCCeEEEEcCCCCC--hhHHHhcCceec--CCHHhhcCCCCEEEEeC--C-CChh
Q 027577 34 LEGKTVGTVGCGRIGKL-LLQRLKPFNCNLLYHDRVKMD--PQLEKETGAKFE--EDLDTMLPKCDIVVVNT--P-LTEK 105 (221)
Q Consensus 34 l~g~~vgIIG~G~iG~~-iA~~l~~~G~~V~~~d~~~~~--~~~~~~~g~~~~--~~l~ell~~aDvVv~~~--p-~~~~ 105 (221)
..+++|-|||.|.+|.+ +|+.|+..|++|.++|..... .+.+++.|+... .+.+.+..++|+||..- | .+|.
T Consensus 17 ~~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~~~~~~~d~vV~Spgi~~~~p~ 96 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVTIEEGYLIAHLQPAPDLVVVGNAMKRGMDV 96 (524)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCEEEESCCGGGGCSCCSEEEECTTCCTTSHH
T ss_pred ecCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEECCCCHHHcCCCCCEEEECCCcCCCCHH
Confidence 56899999999999997 799999999999999986432 234556677643 24455557899998863 3 2332
Q ss_pred hh-------hcch-HHHHhc--CCC-CCEEEEcCCCCccCHHHHHHHHHhCC
Q 027577 106 TR-------GMFD-KDRIAK--MKK-GVLIVNNARGAIMDTQAVVDACSSGH 146 (221)
Q Consensus 106 t~-------~~i~-~~~~~~--mk~-ga~lIn~srg~~vd~~al~~al~~g~ 146 (221)
.. .++. .+.+.. ++. ..+-|.-+.|+--...-+...|+...
T Consensus 97 l~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~G 148 (524)
T 3hn7_A 97 IEYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYAG 148 (524)
T ss_dssp HHHHHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCcEEEHHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHcC
Confidence 21 1232 233333 332 24556666788777777777777654
No 486
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=96.59 E-value=0.011 Score=50.92 Aligned_cols=88 Identities=13% Similarity=0.184 Sum_probs=60.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCC----hhHHHhcCceecCC--------HHhhcC---CCCEEEE
Q 027577 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMD----PQLEKETGAKFEED--------LDTMLP---KCDIVVV 98 (221)
Q Consensus 35 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~----~~~~~~~g~~~~~~--------l~ell~---~aDvVv~ 98 (221)
.|.+|.|+|. |.+|...++.++.+|+++++...+... .+.++++|...+-+ +.++.. ..|+|+-
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvid 246 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALN 246 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEEEE
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEEEE
Confidence 5889999998 999999999999999987766543322 24556677643211 222332 3799988
Q ss_pred eCCCChhhhhcchHHHHhcCCCCCEEEEcC
Q 027577 99 NTPLTEKTRGMFDKDRIAKMKKGVLIVNNA 128 (221)
Q Consensus 99 ~~p~~~~t~~~i~~~~~~~mk~ga~lIn~s 128 (221)
++. .+.+ .+.+..++++..++.++
T Consensus 247 ~~g-~~~~-----~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 247 CVG-GKSS-----TELLRQLARGGTMVTYG 270 (357)
T ss_dssp SSC-HHHH-----HHHHTTSCTTCEEEECC
T ss_pred CCC-cHHH-----HHHHHhhCCCCEEEEEe
Confidence 876 2221 24678889998888875
No 487
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=96.58 E-value=0.0057 Score=50.54 Aligned_cols=38 Identities=16% Similarity=0.150 Sum_probs=34.2
Q ss_pred ccCCCCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCC
Q 027577 31 AYDLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRV 68 (221)
Q Consensus 31 ~~~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~ 68 (221)
+..+.||++.|.|. |.||+.+|+.|...|++|++.+++
T Consensus 5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence 34689999999994 789999999999999999999876
No 488
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=96.57 E-value=0.0021 Score=55.26 Aligned_cols=89 Identities=19% Similarity=0.194 Sum_probs=59.3
Q ss_pred CC--CEEEEEcc-CHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHh-cCceec-----CCHHhhc----C-CCCEEEEe
Q 027577 35 EG--KTVGTVGC-GRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKE-TGAKFE-----EDLDTML----P-KCDIVVVN 99 (221)
Q Consensus 35 ~g--~~vgIIG~-G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~-~g~~~~-----~~l~ell----~-~aDvVv~~ 99 (221)
.| ++|.|.|. |.||..+++.++..|+ +|++.+++....+.+.+ +|.... .+..+.+ . ..|+++.+
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~d~vi~~ 237 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDN 237 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCCCEEEEC
Confidence 36 89999998 9999999999999999 99999986544444444 554321 1222222 1 36777777
Q ss_pred CCCChhhhhcchHHHHhcCCCCCEEEEcCC
Q 027577 100 TPLTEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (221)
Q Consensus 100 ~p~~~~t~~~i~~~~~~~mk~ga~lIn~sr 129 (221)
+.. -.....+..++++..++.++.
T Consensus 238 ~G~------~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 238 VGG------NISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp CCH------HHHHHHHHTEEEEEEEEECCC
T ss_pred CCH------HHHHHHHHHhccCcEEEEECC
Confidence 651 122455667777777777654
No 489
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=96.57 E-value=0.0034 Score=52.59 Aligned_cols=38 Identities=16% Similarity=0.101 Sum_probs=33.7
Q ss_pred cCCCCCEEEEEcc-CH--HHHHHHHHHccCCCeEEEEcCCC
Q 027577 32 YDLEGKTVGTVGC-GR--IGKLLLQRLKPFNCNLLYHDRVK 69 (221)
Q Consensus 32 ~~l~g~~vgIIG~-G~--iG~~iA~~l~~~G~~V~~~d~~~ 69 (221)
..+.||++.|.|. |. ||+++|+.|...|++|++.+++.
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~ 67 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGD 67 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSH
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999997 45 99999999999999999998863
No 490
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=96.57 E-value=0.023 Score=47.20 Aligned_cols=67 Identities=24% Similarity=0.210 Sum_probs=47.6
Q ss_pred CCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCCC--hhHH------HhcCceec-------CCHHhhcCCCCEEEEe
Q 027577 36 GKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMD--PQLE------KETGAKFE-------EDLDTMLPKCDIVVVN 99 (221)
Q Consensus 36 g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~--~~~~------~~~g~~~~-------~~l~ell~~aDvVv~~ 99 (221)
.++|.|.| .|.+|+.+++.|...|++|.+.+|+... .+.. ...++..+ +++.++++.+|+|+.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 83 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 83 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence 47899999 5999999999999999999999987432 1111 12243321 2456678889998887
Q ss_pred CCC
Q 027577 100 TPL 102 (221)
Q Consensus 100 ~p~ 102 (221)
...
T Consensus 84 a~~ 86 (313)
T 1qyd_A 84 LAG 86 (313)
T ss_dssp CCC
T ss_pred Ccc
Confidence 763
No 491
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=96.56 E-value=0.0043 Score=51.83 Aligned_cols=65 Identities=18% Similarity=0.202 Sum_probs=47.2
Q ss_pred CCEEEEEc-cCHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh-----cCceecCCHHhhcCCCCEEEEeCCC
Q 027577 36 GKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-----TGAKFEEDLDTMLPKCDIVVVNTPL 102 (221)
Q Consensus 36 g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-----~g~~~~~~l~ell~~aDvVv~~~p~ 102 (221)
+++|.|.| .|.||+.+++.|...|++|++.+|++...+ ... ..+. .+++.++++.+|+|+.+...
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~ 72 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-INDYEYRVSDYT-LEDLINQLNDVDAVVHLAAT 72 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------CCEEEECCCC-HHHHHHHTTTCSEEEECCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CCceEEEEcccc-HHHHHHhhcCCCEEEEcccc
Confidence 47999999 699999999999999999999998743222 211 1122 23466788999999887653
No 492
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=96.56 E-value=0.0067 Score=52.32 Aligned_cols=69 Identities=20% Similarity=0.154 Sum_probs=49.4
Q ss_pred CCCCCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCcee-------cCCHHhhcCCCCEEEEeCC
Q 027577 33 DLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKF-------EEDLDTMLPKCDIVVVNTP 101 (221)
Q Consensus 33 ~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~-------~~~l~ell~~aDvVv~~~p 101 (221)
...+|+|.|.|. |.||+.+++.|...|++|++.+|+..........++.. .++++++++.+|+|+.+..
T Consensus 26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~ 102 (379)
T 2c5a_A 26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAA 102 (379)
T ss_dssp TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECce
Confidence 346789999996 99999999999999999999998653322111112221 1235677889999987765
No 493
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=96.54 E-value=0.0032 Score=53.29 Aligned_cols=38 Identities=26% Similarity=0.342 Sum_probs=33.4
Q ss_pred cCCCCCEEEEEccCHHHHHHHHHHccCCC-eEEEEcCCC
Q 027577 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVK 69 (221)
Q Consensus 32 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~ 69 (221)
..|.+++|.|||+|.+|..+++.|...|. ++.++|...
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 46899999999999999999999998886 688888653
No 494
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=96.54 E-value=0.018 Score=47.66 Aligned_cols=39 Identities=15% Similarity=0.092 Sum_probs=34.0
Q ss_pred ccCCCCCEEEEEcc-CH--HHHHHHHHHccCCCeEEEEcCCC
Q 027577 31 AYDLEGKTVGTVGC-GR--IGKLLLQRLKPFNCNLLYHDRVK 69 (221)
Q Consensus 31 ~~~l~g~~vgIIG~-G~--iG~~iA~~l~~~G~~V~~~d~~~ 69 (221)
+..+.||++.|.|. |. ||+++|+.|...|++|++.+++.
T Consensus 21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 45789999999995 45 99999999999999999999865
No 495
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=96.53 E-value=0.0047 Score=53.02 Aligned_cols=110 Identities=15% Similarity=0.138 Sum_probs=66.0
Q ss_pred CEEEEEccCHHHHHHHHHHccC-------CCeEEE-EcCCCC------Chh----HHHhcC-ce--ecCCHHhhcC--CC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF-------NCNLLY-HDRVKM------DPQ----LEKETG-AK--FEEDLDTMLP--KC 93 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~-------G~~V~~-~d~~~~------~~~----~~~~~g-~~--~~~~l~ell~--~a 93 (221)
.+|+|+|+|.||+.+++.+... +.+|.+ .|++.. ..+ .....+ +. .+ +.++++. +.
T Consensus 5 irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~-d~~e~l~~~~i 83 (325)
T 3ing_A 5 IRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAF-SGPEDLMGEAA 83 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBC-CSGGGGTTSCC
T ss_pred EEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccC-CHHHHhcCCCC
Confidence 4799999999999999998653 455544 455431 011 112223 21 12 5677774 58
Q ss_pred CEEEEeCCCChhhhhcchHHHHhcCCCCCEEEEcCCCCcc-CHHHHHHHHHhCCce
Q 027577 94 DIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIM-DTQAVVDACSSGHIA 148 (221)
Q Consensus 94 DvVv~~~p~~~~t~~~i~~~~~~~mk~ga~lIn~srg~~v-d~~al~~al~~g~i~ 148 (221)
|+|+.|+|..... +..-+.....|+.|..+|....+.+. .-+.|.++.++.+..
T Consensus 84 DvVVe~T~~~~~~-~pa~~~~~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~~g~~ 138 (325)
T 3ing_A 84 DLLVDCTPASRDG-VREYSLYRMAFESGMNVVTANKSGLANKWHDIMDSANQNSKY 138 (325)
T ss_dssp SEEEECCCCCSSS-HHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCC
T ss_pred CEEEECCCCcccc-chHHHHHHHHHHCCCeEEEcCchhHHHHHHHHHHHHHHcCCe
Confidence 9999999843110 11112345567789999987665442 344566666665554
No 496
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=96.52 E-value=0.013 Score=51.02 Aligned_cols=97 Identities=11% Similarity=0.189 Sum_probs=67.5
Q ss_pred cCCCCCEEEEEcc--CHHHHHHHHHHccCCCeEEEEcCCCC-C-hh-------HHHhcC--ceecCCHHhhcCCCCEEEE
Q 027577 32 YDLEGKTVGTVGC--GRIGKLLLQRLKPFNCNLLYHDRVKM-D-PQ-------LEKETG--AKFEEDLDTMLPKCDIVVV 98 (221)
Q Consensus 32 ~~l~g~~vgIIG~--G~iG~~iA~~l~~~G~~V~~~d~~~~-~-~~-------~~~~~g--~~~~~~l~ell~~aDvVv~ 98 (221)
..+.|.+|++||= ++++++.+..+..+|++|.+..|... . .+ .+.+.| +....+++++++++|+|..
T Consensus 177 ~~l~gl~ia~vGD~~~~va~S~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt 256 (358)
T 4h31_A 177 KALADIQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYT 256 (358)
T ss_dssp CCGGGCEEEEESCTTSHHHHHHHHHHHHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEE
T ss_pred CCcCceEEEecCCCCcccchHHHHHHHhcCceEEEeCCcccCCCHHHHHHHHHHHHHcCCcceeccCHHHHhccCcEEEE
Confidence 3688999999994 58999999999999999999987532 1 11 122334 3456799999999999986
Q ss_pred eCCCC----hhh---------hhcchHHHHhc-CCCCCEEEEcC
Q 027577 99 NTPLT----EKT---------RGMFDKDRIAK-MKKGVLIVNNA 128 (221)
Q Consensus 99 ~~p~~----~~t---------~~~i~~~~~~~-mk~ga~lIn~s 128 (221)
-.=.. ++. ..-++.+.++. .|++++|+.+.
T Consensus 257 ~~w~s~~~~~~~~~~~~~~~~~y~v~~~~l~~~ak~~~i~mH~L 300 (358)
T 4h31_A 257 DVWVSMGESPEAWDERVALMKPYQVNMNVLKQTGNPNVKFMHCL 300 (358)
T ss_dssp CCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHHTTCTTCEEEECS
T ss_pred EEEEEcccCchhHHHHHHHHhCcccCHHHHHhcCCCCcEEECCC
Confidence 43211 111 12356677765 46788888874
No 497
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=96.50 E-value=0.0029 Score=52.84 Aligned_cols=65 Identities=11% Similarity=0.178 Sum_probs=40.1
Q ss_pred CCEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCC--CCEEEEeCC
Q 027577 36 GKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPK--CDIVVVNTP 101 (221)
Q Consensus 36 g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~--aDvVv~~~p 101 (221)
+|+|.|.|. |.||+.+++.|...|++|++.+|+..... .....+....+++++++. +|+|+.+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 69 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPK-FEQVNLLDSNAVHHIIHDFQPHVIVHCAA 69 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-------------------CHHHHHHHCCSEEEECC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCCC-eEEecCCCHHHHHHHHHhhCCCEEEECCc
Confidence 689999996 99999999999999999999997543211 111122222345566664 899987764
No 498
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=96.48 E-value=0.0036 Score=54.11 Aligned_cols=30 Identities=23% Similarity=0.287 Sum_probs=24.6
Q ss_pred CEEEEEccCHHHHHHHHHHccC---CCeEEEEc
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF---NCNLLYHD 66 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~---G~~V~~~d 66 (221)
.+|||+|+|.||+.+.+.|... +++|.+.+
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaIn 35 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAIN 35 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEe
Confidence 3899999999999999998765 36776654
No 499
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=96.48 E-value=0.0023 Score=51.61 Aligned_cols=65 Identities=20% Similarity=0.181 Sum_probs=43.2
Q ss_pred CEEEEEcc-CHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcC----CCCEEEEeCC
Q 027577 37 KTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLP----KCDIVVVNTP 101 (221)
Q Consensus 37 ~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~----~aDvVv~~~p 101 (221)
|+|.|.|. |.||+.+++.|...|++|++.+|+....+......+....+++++++ ..|+|+.+..
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag 71 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAG 71 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHHTTCCSEEEECCC
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccccccCCcccHHHHHHHHHHcCCCccEEEECCC
Confidence 47889985 99999999999999999999998753321100000111123344443 7999988764
No 500
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=96.46 E-value=0.0061 Score=52.53 Aligned_cols=31 Identities=23% Similarity=0.367 Sum_probs=25.3
Q ss_pred CEEEEEccCHHHHHHHHHHccC-CCeEEEEcC
Q 027577 37 KTVGTVGCGRIGKLLLQRLKPF-NCNLLYHDR 67 (221)
Q Consensus 37 ~~vgIIG~G~iG~~iA~~l~~~-G~~V~~~d~ 67 (221)
.+|||+|+|.||+.+.+.|... .++|.+.+.
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~~veivain~ 33 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNPDIEVVAVND 33 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTTEEEEEEEC
T ss_pred eEEEEECCCHHHHHHHHHHhCCCCeEEEEEeC
Confidence 3799999999999999998765 567766653
Done!