BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027581
(221 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|21553676|gb|AAM62769.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
Length = 300
Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 128/183 (69%), Positives = 145/183 (79%), Gaps = 18/183 (9%)
Query: 1 MALTVSRRLLRRFGSFSAFGRYESPSLTSRSIRSPPDLYVACSGDNLFPL----KSGLSF 56
MA ++SRR+ R FGSFSA GR SP+L++ + SG+ L L K G++
Sbjct: 1 MAASISRRIFRTFGSFSALGRSSSPNLSANT-----------SGNGLASLTNDLKYGMAL 49
Query: 57 LASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVL 116
L++RK ST+ILTPD S FPSDLL KKTVLTPD TIG +QDLVIPVTNF NE+KGFMVL
Sbjct: 50 LSNRKLSTSILTPDDS---FPSDLLTKKTVLTPDRTIGQYQDLVIPVTNFQNEEKGFMVL 106
Query: 117 AGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLR 176
AGDVFDVPIRKDIIH VVRWQLAKRQQGTHSTKT+SEVSGTG+KPW QKGTGRARHGTLR
Sbjct: 107 AGDVFDVPIRKDIIHNVVRWQLAKRQQGTHSTKTLSEVSGTGRKPWNQKGTGRARHGTLR 166
Query: 177 GPQ 179
GPQ
Sbjct: 167 GPQ 169
>gi|18399235|ref|NP_565463.1| large subunit ribosomal protein L4 [Arabidopsis thaliana]
gi|18252969|gb|AAL62411.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
gi|20197568|gb|AAD24390.2| 50S ribosomal protein L4 [Arabidopsis thaliana]
gi|25084070|gb|AAN72167.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
gi|330251866|gb|AEC06960.1| large subunit ribosomal protein L4 [Arabidopsis thaliana]
Length = 300
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 128/183 (69%), Positives = 145/183 (79%), Gaps = 18/183 (9%)
Query: 1 MALTVSRRLLRRFGSFSAFGRYESPSLTSRSIRSPPDLYVACSGDNLFPL----KSGLSF 56
MA ++SRR+ R FGSFSA GR SP+L++ + SG+ L L K G++
Sbjct: 1 MAASISRRIFRTFGSFSALGRSSSPNLSANT-----------SGNGLASLTNDLKYGMAL 49
Query: 57 LASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVL 116
L++RK ST+ILTPD S FPSDLL KKTVLTPD TIG +QDLVIPVTNF NE+KGFMVL
Sbjct: 50 LSNRKLSTSILTPDDS---FPSDLLTKKTVLTPDRTIGQYQDLVIPVTNFQNEEKGFMVL 106
Query: 117 AGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLR 176
AGDVFDVPIRKDIIH VVRWQLAKRQQGTHSTKT+SEVSGTG+KPW QKGTGRARHGTLR
Sbjct: 107 AGDVFDVPIRKDIIHNVVRWQLAKRQQGTHSTKTLSEVSGTGRKPWNQKGTGRARHGTLR 166
Query: 177 GPQ 179
GPQ
Sbjct: 167 GPQ 169
>gi|449433990|ref|XP_004134779.1| PREDICTED: 50S ribosomal protein L4-like [Cucumis sativus]
gi|449531047|ref|XP_004172499.1| PREDICTED: 50S ribosomal protein L4-like [Cucumis sativus]
Length = 315
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 128/184 (69%), Positives = 146/184 (79%), Gaps = 5/184 (2%)
Query: 1 MALTVSRRLLRRFGSFSAFGRYESPSLTSRSIRSPPDLYVACSGDN-LFPLKSGL----S 55
MA++VSRRLLR GS S FG+ S SRS +P ++Y SG + F +S L S
Sbjct: 1 MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGS 60
Query: 56 FLASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMV 115
FLASR F T+ILTP+SS AFPS+LL K V + + IGL+QDL+IPVTNF NEDKGFMV
Sbjct: 61 FLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGLYQDLMIPVTNFENEDKGFMV 120
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
LAGDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG+KPW+QKGTGRARHGTL
Sbjct: 121 LAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTL 180
Query: 176 RGPQ 179
RGPQ
Sbjct: 181 RGPQ 184
>gi|255554769|ref|XP_002518422.1| 50S ribosomal protein L4, putative [Ricinus communis]
gi|223542267|gb|EEF43809.1| 50S ribosomal protein L4, putative [Ricinus communis]
Length = 294
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 124/179 (69%), Positives = 142/179 (79%), Gaps = 16/179 (8%)
Query: 1 MALTVSRRLLRRFGSFSAFGRYESPSLTSRSIRSPPDLYVACSGDNLFPLKSGLSFLASR 60
MA+++SRR+LR F S PSLT +S R+ S ++ +K+G + LA R
Sbjct: 1 MAVSISRRILRSFRSL--------PSLTHQSFRA--------SHESSSFIKNGAASLACR 44
Query: 61 KFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDV 120
K ST+ILTP SS+ AFPSDLL KT+LTP+ IGLH+DLVIPVTNF NEDKGFMVLAGDV
Sbjct: 45 KLSTSILTPGSSDDAFPSDLLSTKTLLTPEREIGLHEDLVIPVTNFLNEDKGFMVLAGDV 104
Query: 121 FDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
FDVPI+K IIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP+RQKGTGRARHGTLRGPQ
Sbjct: 105 FDVPIKKHIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPYRQKGTGRARHGTLRGPQ 163
>gi|359494830|ref|XP_003634850.1| PREDICTED: 50S ribosomal protein L4-like [Vitis vinifera]
gi|297741766|emb|CBI32995.3| unnamed protein product [Vitis vinifera]
Length = 315
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/184 (66%), Positives = 135/184 (73%), Gaps = 5/184 (2%)
Query: 1 MALTVSRRLLRRFGSFSAFGRYESPSLTSRSIRSPPDLYVACSGDNLFPLKSGLS----- 55
MA+++SRRLLR FG FG SP + R+ L S D LF S
Sbjct: 1 MAVSISRRLLRTFGPSRVFGHCNSPMIMCPLFRTSDALCGLVSQDGLFSTDSSCKTGSSF 60
Query: 56 FLASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMV 115
+ +TTILTP+SS AFP +LL KTVLTP+ T G +QDLVIPVTNF NEDKGFMV
Sbjct: 61 LSSRSLSTTTILTPESSGVAFPPELLSTKTVLTPERTPGHYQDLVIPVTNFHNEDKGFMV 120
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
LAGDVFDVPIRKDI+HRVVRWQLAKRQQGTHSTKTISEVSGTG+KPWRQKGTGRARHGTL
Sbjct: 121 LAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTL 180
Query: 176 RGPQ 179
RGPQ
Sbjct: 181 RGPQ 184
>gi|297836242|ref|XP_002886003.1| 50S ribosomal protein L4 [Arabidopsis lyrata subsp. lyrata]
gi|297331843|gb|EFH62262.1| 50S ribosomal protein L4 [Arabidopsis lyrata subsp. lyrata]
Length = 297
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/183 (66%), Positives = 140/183 (76%), Gaps = 21/183 (11%)
Query: 1 MALTVSRRLLRRFGSFSAFGRYESPSLTSRSIRSPPDLYVACSGDNLFPLKS----GLSF 56
MA ++S R+ R FGS GR SP+L++ + SG+ L L S G++
Sbjct: 1 MAASISARIFRTFGSL---GRCSSPNLSANT-----------SGNGLSSLTSDLKYGMAL 46
Query: 57 LASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVL 116
L++RK ST ILTPD + FPSDLL KKTVLTPD TIG +QDLVIPVTNF +E+KGFMVL
Sbjct: 47 LSNRKLSTCILTPDDT---FPSDLLTKKTVLTPDRTIGQYQDLVIPVTNFQSEEKGFMVL 103
Query: 117 AGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLR 176
AGDVFDVPIRKDIIH VVRWQLAKRQQGTHSTKT+SEVSGTG+KPW QKGTGRARHGTLR
Sbjct: 104 AGDVFDVPIRKDIIHNVVRWQLAKRQQGTHSTKTLSEVSGTGRKPWNQKGTGRARHGTLR 163
Query: 177 GPQ 179
GPQ
Sbjct: 164 GPQ 166
>gi|363807964|ref|NP_001242456.1| uncharacterized protein LOC100804238 [Glycine max]
gi|255635327|gb|ACU18017.1| unknown [Glycine max]
Length = 312
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/182 (64%), Positives = 138/182 (75%), Gaps = 3/182 (1%)
Query: 1 MALTVSRRLLRRFG-SFSAFGR--YESPSLTSRSIRSPPDLYVACSGDNLFPLKSGLSFL 57
MA +S+R+LR S + GR ++SPS SI P D+ + SG+ + P L
Sbjct: 1 MAALISKRILRCSSWSLHSLGRCYFDSPSAGFASIYKPRDVCSSLSGERMLPADRSLVRS 60
Query: 58 ASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLA 117
R+FST+ILTP + + AFPSDLL KKT+ T + TIGL QDL+IPVTNF NEDKG+MV
Sbjct: 61 MVRQFSTSILTPGADDSAFPSDLLSKKTLATSERTIGLCQDLLIPVTNFHNEDKGYMVFP 120
Query: 118 GDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRG 177
GDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG+KPW QKGTGRARHG+LRG
Sbjct: 121 GDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGSLRG 180
Query: 178 PQ 179
PQ
Sbjct: 181 PQ 182
>gi|356532241|ref|XP_003534682.1| PREDICTED: 50S ribosomal protein L4-like [Glycine max]
Length = 310
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/182 (64%), Positives = 136/182 (74%), Gaps = 5/182 (2%)
Query: 1 MALTVSRRLLR-RFGSFSAFGR--YESPSLTSRSIRSPPDLYVACSGDNLFPLKSGLSFL 57
MA +S+R+LR GS + GR ++SP S I P D+ SG+ +F L
Sbjct: 1 MAALISKRILRCSSGSLHSLGRCYFDSPGFAS--IYKPRDVCGGLSGERMFSADRSLVGS 58
Query: 58 ASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLA 117
R+FST+ILTP + AFPSDLL KK + T + TIGL QDL+IPVTNF NEDKG+MVL
Sbjct: 59 MVRQFSTSILTPGDDDSAFPSDLLSKKILATSERTIGLCQDLLIPVTNFHNEDKGYMVLP 118
Query: 118 GDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRG 177
GDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG+KPW QKGTGRARHG+LRG
Sbjct: 119 GDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGSLRG 178
Query: 178 PQ 179
PQ
Sbjct: 179 PQ 180
>gi|224118096|ref|XP_002331557.1| predicted protein [Populus trichocarpa]
gi|222873781|gb|EEF10912.1| predicted protein [Populus trichocarpa]
Length = 285
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/180 (65%), Positives = 132/180 (73%), Gaps = 32/180 (17%)
Query: 1 MALTVSRRLLRRFGSFSAFGRY-ESPSLTSRSIRSPPDLYVACSGDNLFPLKSGLSFLAS 59
MAL++SRR+LR FGS S FGR +S SLT
Sbjct: 1 MALSISRRVLRSFGSLSGFGRCGDSSSLT------------------------------- 29
Query: 60 RKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGD 119
R+ ST+ +T +S++G+FPSDLL K V+TP IGL+QDLVIPVTNF NEDKG MVLAGD
Sbjct: 30 RQLSTSNVTSESTDGSFPSDLLSAKNVVTPQREIGLYQDLVIPVTNFHNEDKGLMVLAGD 89
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG+KP+RQKGTGRARHGTLRGPQ
Sbjct: 90 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPYRQKGTGRARHGTLRGPQ 149
>gi|255635335|gb|ACU18021.1| unknown [Glycine max]
Length = 224
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 117/182 (64%), Positives = 136/182 (74%), Gaps = 5/182 (2%)
Query: 1 MALTVSRRLLR-RFGSFSAFGR--YESPSLTSRSIRSPPDLYVACSGDNLFPLKSGLSFL 57
MA +S+R+LR GS + GR ++SP S I P D+ SG+ +F L
Sbjct: 1 MAALISKRILRCSSGSLHSLGRCYFDSPGFAS--IYKPRDVCGGLSGERMFSADRSLVGS 58
Query: 58 ASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLA 117
R+FST+ILTP + AFPSDLL KK + T + TIGL QDL+IPVTNF NEDKG+MVL
Sbjct: 59 MVRQFSTSILTPGDDDSAFPSDLLSKKILATSERTIGLCQDLLIPVTNFHNEDKGYMVLP 118
Query: 118 GDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRG 177
GDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG+KPW QKGTGRARHG+LRG
Sbjct: 119 GDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGSLRG 178
Query: 178 PQ 179
PQ
Sbjct: 179 PQ 180
>gi|147767815|emb|CAN77922.1| hypothetical protein VITISV_027648 [Vitis vinifera]
Length = 278
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/117 (85%), Positives = 107/117 (91%)
Query: 63 STTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFD 122
+TT+LTP+SS AFP +LL KTVLTP+ T G +QDLVIPVTNF NEDKGFM LAGDVFD
Sbjct: 31 TTTMLTPESSGVAFPPELLSTKTVLTPERTPGHYQDLVIPVTNFHNEDKGFMXLAGDVFD 90
Query: 123 VPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
VPIRKDI+HRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ
Sbjct: 91 VPIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 147
>gi|357466353|ref|XP_003603461.1| 50S ribosomal protein L4 [Medicago truncatula]
gi|355492509|gb|AES73712.1| 50S ribosomal protein L4 [Medicago truncatula]
Length = 366
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 109/181 (60%), Positives = 129/181 (71%), Gaps = 19/181 (10%)
Query: 1 MALTVSRRLLRRFGSFSAFGR--YESPSLTSRSIRSPPDLYVACSGDNLFPLKSGLSFLA 58
MA +S+RLLR + S + GR + SPS LY G+ L + L+
Sbjct: 48 MASFISKRLLRSYQSLHSLGRRCFNSPS--------AAGLY----GERLISAQRILTGSI 95
Query: 59 SRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAG 118
+++FST+ + E AFPSDLL KK + T + IGL QDL+IPVTNF NEDKGFMVLAG
Sbjct: 96 TQRFSTS-----TDEAAFPSDLLSKKPLATSERDIGLCQDLLIPVTNFHNEDKGFMVLAG 150
Query: 119 DVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGP 178
DVFD+PIRKDI+HRVV WQ AKRQQGTHSTKTISEVSGTG+KPW QKGTGRARHG+LRGP
Sbjct: 151 DVFDMPIRKDIVHRVVLWQRAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGSLRGP 210
Query: 179 Q 179
Q
Sbjct: 211 Q 211
>gi|388496888|gb|AFK36510.1| unknown [Lotus japonicus]
Length = 305
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 121/179 (67%), Gaps = 11/179 (6%)
Query: 1 MALTVSRRLLRRFGSFSAFGRYESPSLTSRSIRSPPDLYVACSGDNLFPLKSGLSFLAS- 59
MA +S+RLLR S + GR R D+ + SG+ F + LA
Sbjct: 1 MAALISKRLLRSSESLHSLGR--------RCFHQSRDICSSLSGERRFSAQRPGLLLARS 52
Query: 60 --RKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLA 117
++F T++ P EGAFPSDLL K + T + IGL QDL+IPVTNF NEDKG MVLA
Sbjct: 53 MIQRFCTSVSVPGYHEGAFPSDLLSNKPLATSERDIGLCQDLLIPVTNFHNEDKGLMVLA 112
Query: 118 GDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLR 176
GDVFDVPIRKDIIHRVVRWQLA+RQQGTHSTKT+SEV GTG+K ++QKG G+ARHG+ R
Sbjct: 113 GDVFDVPIRKDIIHRVVRWQLARRQQGTHSTKTVSEVRGTGRKMYKQKGLGKARHGSQR 171
>gi|357156335|ref|XP_003577421.1| PREDICTED: 50S ribosomal protein L4-like [Brachypodium distachyon]
Length = 289
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/116 (76%), Positives = 100/116 (86%), Gaps = 1/116 (0%)
Query: 64 TTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDV 123
+T+L P ++EG PS+LL KTV TPD +G ++DLV VTNF NEDKGFMVL GDVFDV
Sbjct: 44 STLLAP-ANEGMIPSELLSSKTVWTPDRELGQYEDLVARVTNFHNEDKGFMVLDGDVFDV 102
Query: 124 PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
PIRKDI+HRVVRWQLAKRQQGTHSTKTISEVSGTG+KP+ QKGTGRARHGTLRG Q
Sbjct: 103 PIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPYAQKGTGRARHGTLRGCQ 158
>gi|115486043|ref|NP_001068165.1| Os11g0585700 [Oryza sativa Japonica Group]
gi|77551649|gb|ABA94446.1| ribosomal protein L4/L1 family protein, expressed [Oryza sativa
Japonica Group]
gi|113645387|dbj|BAF28528.1| Os11g0585700 [Oryza sativa Japonica Group]
Length = 286
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/116 (75%), Positives = 99/116 (85%), Gaps = 1/116 (0%)
Query: 64 TTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDV 123
+T+L P ++E P +LL KTV TPD +G ++DLV VTNF NEDKGFMVL GDVFDV
Sbjct: 41 STLLAP-ANEVLIPQELLSSKTVWTPDRELGQYEDLVARVTNFHNEDKGFMVLDGDVFDV 99
Query: 124 PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
PIRKDI+HRVVRWQLAKRQQGTHSTKTISEVSGTG+KP+ QKGTGRARHGTLRGPQ
Sbjct: 100 PIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPYNQKGTGRARHGTLRGPQ 155
>gi|222616220|gb|EEE52352.1| hypothetical protein OsJ_34399 [Oryza sativa Japonica Group]
Length = 353
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/116 (75%), Positives = 99/116 (85%), Gaps = 1/116 (0%)
Query: 64 TTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDV 123
+T+L P ++E P +LL KTV TPD +G ++DLV VTNF NEDKGFMVL GDVFDV
Sbjct: 108 STLLAP-ANEVLIPQELLSSKTVWTPDRELGQYEDLVARVTNFHNEDKGFMVLDGDVFDV 166
Query: 124 PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
PIRKDI+HRVVRWQLAKRQQGTHSTKTISEVSGTG+KP+ QKGTGRARHGTLRGPQ
Sbjct: 167 PIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPYNQKGTGRARHGTLRGPQ 222
>gi|242072798|ref|XP_002446335.1| hypothetical protein SORBIDRAFT_06g014470 [Sorghum bicolor]
gi|241937518|gb|EES10663.1| hypothetical protein SORBIDRAFT_06g014470 [Sorghum bicolor]
Length = 333
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/116 (75%), Positives = 99/116 (85%), Gaps = 1/116 (0%)
Query: 64 TTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDV 123
+T+L P SE P +LL +TV TPD +G ++DLV VTNF NEDKGFMVL GDVFDV
Sbjct: 88 STLLAP-PSEVLIPPELLSSRTVWTPDRELGQYEDLVARVTNFHNEDKGFMVLDGDVFDV 146
Query: 124 PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
PIRKDI+HRVVRWQLAKRQQGTHSTKTISEVSGTG+KP++QKGTGRARHGTLRGPQ
Sbjct: 147 PIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPYKQKGTGRARHGTLRGPQ 202
>gi|326524247|dbj|BAK00507.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 289
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 113/156 (72%), Gaps = 4/156 (2%)
Query: 24 SPSLTSRSIRSPPDLYVACSGDNLFPLKSGLSFLASRKFSTTILTPDSSEGAFPSDLLLK 83
+ S+ R++ PP L G + L L + S +ST L ++E P +LL
Sbjct: 7 AASILRRAVACPPQL--GAVGRDTSLLAKILPNVYSNGYST--LMAPANEVLIPPELLSS 62
Query: 84 KTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQ 143
KTV TPD +G ++DLV VTNF NEDKGFMVL GDVFDVPIRKDI+HRVVRWQLAKRQQ
Sbjct: 63 KTVWTPDRELGQYEDLVARVTNFHNEDKGFMVLDGDVFDVPIRKDIVHRVVRWQLAKRQQ 122
Query: 144 GTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
GTHSTKTISEVSGTG+KP++QKGTGRARHGTLRG Q
Sbjct: 123 GTHSTKTISEVSGTGRKPYKQKGTGRARHGTLRGCQ 158
>gi|242032629|ref|XP_002463709.1| hypothetical protein SORBIDRAFT_01g004650 [Sorghum bicolor]
gi|241917563|gb|EER90707.1| hypothetical protein SORBIDRAFT_01g004650 [Sorghum bicolor]
Length = 294
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/116 (75%), Positives = 99/116 (85%), Gaps = 1/116 (0%)
Query: 64 TTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDV 123
+T+L P SE P +LL +TV TPD +G ++DLV VTNF NEDKGFMVL GDVFDV
Sbjct: 49 STLLAP-PSEVLIPPELLSSRTVWTPDRELGQYEDLVARVTNFHNEDKGFMVLDGDVFDV 107
Query: 124 PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
PIRKDI+HRVVRWQLAKRQQGTHSTKTISEVSGTG+KP++QKGTGRARHGTLRGPQ
Sbjct: 108 PIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPYKQKGTGRARHGTLRGPQ 163
>gi|414873447|tpg|DAA52004.1| TPA: 50S ribosomal protein L4 [Zea mays]
Length = 293
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/152 (61%), Positives = 108/152 (71%), Gaps = 9/152 (5%)
Query: 28 TSRSIRSPPDLYVACSGDNLFPLKSGLSFLASRKFSTTILTPDSSEGAFPSDLLLKKTVL 87
T+ S+ PP C NL G F +ST + P+ E P +LL +TV
Sbjct: 20 TTASLYHPPRNVGPCLVKNL----PGFFF---NGYSTLLAPPN--EVLIPPELLSSRTVW 70
Query: 88 TPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHS 147
TPD +G ++DLV VTNF NEDKGFMVL GDVFDVPIRKDI+HRVVRWQLAKRQQGTHS
Sbjct: 71 TPDRELGQYEDLVARVTNFHNEDKGFMVLDGDVFDVPIRKDIVHRVVRWQLAKRQQGTHS 130
Query: 148 TKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
TKTISEVSGTG+KP+ QKGTG+ARHGTLRG Q
Sbjct: 131 TKTISEVSGTGRKPYPQKGTGKARHGTLRGAQ 162
>gi|226491762|ref|NP_001147335.1| LOC100280943 [Zea mays]
gi|195610184|gb|ACG26922.1| 50S ribosomal protein L4 [Zea mays]
Length = 293
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/152 (61%), Positives = 108/152 (71%), Gaps = 9/152 (5%)
Query: 28 TSRSIRSPPDLYVACSGDNLFPLKSGLSFLASRKFSTTILTPDSSEGAFPSDLLLKKTVL 87
T+ S+ PP C NL G F +ST + P+ E P +LL +TV
Sbjct: 20 TTASLYHPPRNVGPCLVKNL----PGFFF---NGYSTLLAPPN--EVLIPPELLSSRTVW 70
Query: 88 TPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHS 147
TPD +G ++DLV VTNF NEDKGFMVL GDVFDVPIRKDI+HRVVRWQLAKRQQGTHS
Sbjct: 71 TPDRELGQYEDLVARVTNFHNEDKGFMVLDGDVFDVPIRKDIVHRVVRWQLAKRQQGTHS 130
Query: 148 TKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
TKTISEVSGTG+KP+ QKGTG+ARHGTLRG Q
Sbjct: 131 TKTISEVSGTGRKPYPQKGTGKARHGTLRGAQ 162
>gi|294463048|gb|ADE77062.1| unknown [Picea sitchensis]
Length = 323
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 86/152 (56%), Positives = 105/152 (69%), Gaps = 7/152 (4%)
Query: 41 ACSGDNLFPLKSGLSFLASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLV 100
A SG+ ++ S +++R + + TP + PS+LL + G +DL
Sbjct: 60 ATSGNGMW------SLISARGLCSFVPTPQTDLVISPSELLAAQAAYAAQRVQGKFEDLT 113
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ VTN NEDKG +VLAGDVFDVPIRKDIIHRVVRWQLAKR+QGTHSTKTISEVSGTG+K
Sbjct: 114 LRVTNMRNEDKGMIVLAGDVFDVPIRKDIIHRVVRWQLAKRRQGTHSTKTISEVSGTGRK 173
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PW QKGTG+ARHGTLRGPQ + + A KP
Sbjct: 174 PWPQKGTGKARHGTLRGPQ-FRHGATMHGPKP 204
>gi|218186003|gb|EEC68430.1| hypothetical protein OsI_36619 [Oryza sativa Indica Group]
Length = 273
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/116 (66%), Positives = 87/116 (75%), Gaps = 14/116 (12%)
Query: 64 TTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDV 123
+T+L P ++E P +LL KTV TPD ++DLV VTNF NEDKGFMVL GDVFDV
Sbjct: 41 STLLAP-ANEVLIPQELLSSKTVWTPDRQ---YEDLVARVTNFHNEDKGFMVLDGDVFDV 96
Query: 124 PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
PIRKDI+HRV GTHSTKTISEVSGTG+KP+ QKGTGRARHGTLRGPQ
Sbjct: 97 PIRKDIVHRV----------GTHSTKTISEVSGTGRKPYNQKGTGRARHGTLRGPQ 142
>gi|218186871|gb|EEC69298.1| hypothetical protein OsI_38360 [Oryza sativa Indica Group]
Length = 197
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/66 (90%), Positives = 64/66 (96%)
Query: 114 MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 173
MVL GDVFDVPIRKDI+HRVVRWQLAKRQQGTHSTK ISEVSGTG+KP++QKGTGRARHG
Sbjct: 1 MVLDGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKIISEVSGTGRKPYKQKGTGRARHG 60
Query: 174 TLRGPQ 179
TLRGPQ
Sbjct: 61 TLRGPQ 66
>gi|168041144|ref|XP_001773052.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675599|gb|EDQ62092.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 269
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 72/86 (83%)
Query: 94 GLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISE 153
G +D+ + VTNF +EDKG LAGDVFDVPIR D++HRVVRWQLAKR+QGT STK I E
Sbjct: 52 GQLKDVEVKVTNFQSEDKGLATLAGDVFDVPIRPDVVHRVVRWQLAKRRQGTASTKGIHE 111
Query: 154 VSGTGKKPWRQKGTGRARHGTLRGPQ 179
VSGTG+KP QKG+GRARHG+LRGPQ
Sbjct: 112 VSGTGRKPGPQKGSGRARHGSLRGPQ 137
>gi|223944103|gb|ACN26135.1| unknown [Zea mays]
Length = 197
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/66 (89%), Positives = 63/66 (95%)
Query: 114 MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 173
MVL GDVFDVPIRKDI+HRVVRWQLAKRQQGTHSTKTISEVSGTG+KP+ QKGTG+ARHG
Sbjct: 1 MVLDGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPYPQKGTGKARHG 60
Query: 174 TLRGPQ 179
TLRG Q
Sbjct: 61 TLRGAQ 66
>gi|307110022|gb|EFN58259.1| hypothetical protein CHLNCDRAFT_142203 [Chlorella variabilis]
Length = 322
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 74/102 (72%)
Query: 78 SDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQ 137
DLLL L GL++DL++P+ + + G + L GD+FDVPIR+DI+HRVVRWQ
Sbjct: 78 EDLLLPAIPLEQQERQGLYRDLIVPLYDLSRQPVGTVTLGGDIFDVPIRRDILHRVVRWQ 137
Query: 138 LAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
LAKRQQGTH TKT SEV G G+KP QKG+GR+R GT+R PQ
Sbjct: 138 LAKRQQGTHKTKTRSEVRGGGRKPRPQKGSGRSRQGTIRAPQ 179
>gi|302772867|ref|XP_002969851.1| hypothetical protein SELMODRAFT_227946 [Selaginella moellendorffii]
gi|300162362|gb|EFJ28975.1| hypothetical protein SELMODRAFT_227946 [Selaginella moellendorffii]
Length = 215
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 70/83 (84%)
Query: 97 QDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSG 156
+D+V+PVTN+ EDKG + +AGD+FDVPIRKDI+H VV+WQ AKR++GTHSTKT EV+G
Sbjct: 2 RDVVLPVTNWEQEDKGTVTIAGDIFDVPIRKDIVHHVVKWQRAKRRKGTHSTKTRGEVAG 61
Query: 157 TGKKPWRQKGTGRARHGTLRGPQ 179
+ +K +QKGTG+ARHG+ R PQ
Sbjct: 62 STRKIHKQKGTGKARHGSRRAPQ 84
>gi|302807160|ref|XP_002985293.1| hypothetical protein SELMODRAFT_181558 [Selaginella moellendorffii]
gi|300147121|gb|EFJ13787.1| hypothetical protein SELMODRAFT_181558 [Selaginella moellendorffii]
Length = 215
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 70/83 (84%)
Query: 97 QDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSG 156
+D+V+PVTN+ EDKG + +AGD+FDVPIRKDI+H VV+WQ AKR++GTHSTKT EV+G
Sbjct: 2 RDVVLPVTNWEQEDKGTVTIAGDIFDVPIRKDIVHHVVKWQRAKRRKGTHSTKTRGEVAG 61
Query: 157 TGKKPWRQKGTGRARHGTLRGPQ 179
+ +K +QKGTG+ARHG+ R PQ
Sbjct: 62 STRKINKQKGTGKARHGSRRAPQ 84
>gi|209964041|ref|YP_002296956.1| 50S ribosomal protein L4 [Rhodospirillum centenum SW]
gi|226730714|sp|B6IRQ7.1|RL4_RHOCS RecName: Full=50S ribosomal protein L4
gi|209957507|gb|ACI98143.1| ribosomal protein L4 [Rhodospirillum centenum SW]
Length = 206
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 59/77 (76%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V N NE G + LA +VF +P R+DI+ R+V WQLAKR+QGTH TK ISE++GT KKPW
Sbjct: 5 VKNLNNETVGEIELADEVFGLPTRQDILTRMVLWQLAKRRQGTHKTKGISEIAGTTKKPW 64
Query: 163 RQKGTGRARHGTLRGPQ 179
RQKGTGRAR G+ R PQ
Sbjct: 65 RQKGTGRARQGSTRSPQ 81
>gi|392383010|ref|YP_005032207.1| 50S ribosomal subunit protein L4 [Azospirillum brasilense Sp245]
gi|356877975|emb|CCC98837.1| 50S ribosomal subunit protein L4 [Azospirillum brasilense Sp245]
Length = 208
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 59/77 (76%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N NE G + LA ++F +P R DI+ R+V WQLAKR+ GTH TKTISE+SGTGKKP+
Sbjct: 7 IKNLNNETVGEIELADEIFGLPSRTDILARMVNWQLAKRRAGTHKTKTISEISGTGKKPY 66
Query: 163 RQKGTGRARHGTLRGPQ 179
RQKGTGRAR G++R Q
Sbjct: 67 RQKGTGRARQGSMRSAQ 83
>gi|427429419|ref|ZP_18919454.1| LSU ribosomal protein L4p (L1e) [Caenispirillum salinarum AK4]
gi|425880612|gb|EKV29308.1| LSU ribosomal protein L4p (L1e) [Caenispirillum salinarum AK4]
Length = 206
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 59/79 (74%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N+ G + LA D+F + +R D++HRVVRWQLAKRQ GTH TK ISE+SGT KK
Sbjct: 3 VDVITLDNKSAGSVELAEDIFGLDVRADLLHRVVRWQLAKRQAGTHKTKGISEISGTTKK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTG AR G++R PQ
Sbjct: 63 PFRQKGTGHARQGSMRSPQ 81
>gi|406989325|gb|EKE09117.1| hypothetical protein ACD_16C00213G0040 [uncultured bacterium]
Length = 206
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 60/77 (77%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V NF N+ G + L+ ++F P+R+DI+ R+V WQLAKR+ G H+TK IS++SGT KKPW
Sbjct: 5 VRNFDNKKVGEIKLSPEIFSAPLRQDILARMVHWQLAKRRSGNHATKGISQISGTTKKPW 64
Query: 163 RQKGTGRARHGTLRGPQ 179
RQKGTGRAR G+LR PQ
Sbjct: 65 RQKGTGRARQGSLRSPQ 81
>gi|83584315|gb|ABC24932.1| plastid 50S ribosomal protein L4 family [Prototheca wickerhamii]
Length = 228
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 58/86 (67%)
Query: 94 GLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISE 153
G DLV+P+ N G L GDVF+ +R DI+HRVVRWQLA RQQGTH TKT +E
Sbjct: 64 GSEADLVVPLLNHRGRSVGSFTLGGDVFNTVVRPDILHRVVRWQLAARQQGTHKTKTRTE 123
Query: 154 VSGTGKKPWRQKGTGRARHGTLRGPQ 179
V G G+KP QKG G +R G++R PQ
Sbjct: 124 VRGGGRKPRPQKGGGVSRQGSIRAPQ 149
>gi|347543074|ref|YP_004857712.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346986111|dbj|BAK81786.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 208
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G + L +VFDV I+K +H+VV QLA ++QGTHS KT SEVSG GKK
Sbjct: 4 VEVYNICGEKVGELELLKEVFDVEIKKYAVHQVVVAQLANKRQGTHSAKTRSEVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PWRQKGTGRAR G++R PQ W + A KP
Sbjct: 64 PWRQKGTGRARQGSIRAPQ-WIHGGVVFAPKP 94
>gi|389878488|ref|YP_006372053.1| 50S ribosomal protein L4P [Tistrella mobilis KA081020-065]
gi|388529272|gb|AFK54469.1| 50S ribosomal protein L4P [Tistrella mobilis KA081020-065]
Length = 207
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 74/136 (54%), Gaps = 17/136 (12%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V NED G + LA +VF +P R DI+HR+VR+QLAKR+ GTH KTISE++G+ K
Sbjct: 3 VKVITLDNEDAGTIALADEVFGLPARVDILHRMVRYQLAKRRAGTHKVKTISEIAGSTAK 62
Query: 161 PWRQKGTGRARHG-----------TLRGPQGWYY------NARSKAQKPCYKVEQEGAAA 203
+RQKGTGRARHG T+ GP + R A K V+ +G
Sbjct: 63 IYRQKGTGRARHGAKRANIFRGGATVHGPVVRSHAHDLPKKVRRLALKTALSVKAQGGKL 122
Query: 204 WVEDCSICSSSRRKAL 219
V D ++ KAL
Sbjct: 123 VVVDELKADDAKTKAL 138
>gi|342733057|ref|YP_004771896.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|384456425|ref|YP_005669023.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|417959301|ref|ZP_12602136.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-1]
gi|417965178|ref|ZP_12606767.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-4]
gi|417966153|ref|ZP_12607560.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-5]
gi|417968156|ref|ZP_12609199.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-co]
gi|418015536|ref|ZP_12655101.1| ribosomal protein L4/L1 family protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|418373310|ref|ZP_12965401.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|342330512|dbj|BAK57154.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345505871|gb|EGX28165.1| ribosomal protein L4/L1 family protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346984771|dbj|BAK80447.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|380333672|gb|EIA24208.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-1]
gi|380338716|gb|EIA27582.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-4]
gi|380340262|gb|EIA28883.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-co]
gi|380341699|gb|EIA30173.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|380343365|gb|EIA31747.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-5]
Length = 208
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G + L ++FDV I+K +H+VV QLA ++QGT S KT SEVSG GKK
Sbjct: 4 VAVYNICGEKVGELELLKEIFDVEIKKYAVHQVVVTQLANKRQGTQSAKTRSEVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PWRQKGTGRAR G++R PQ W + A KP
Sbjct: 64 PWRQKGTGRARQGSIRAPQ-WIHGGVVFAPKP 94
>gi|390450920|ref|ZP_10236504.1| 50S ribosomal protein L4 [Nitratireductor aquibiodomus RA22]
gi|389661682|gb|EIM73281.1| 50S ribosomal protein L4 [Nitratireductor aquibiodomus RA22]
Length = 206
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 58/79 (73%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I VT +D G + ++ ++F + R+DI+HRVVRWQLAK+QQGTH TK SE+S TG K
Sbjct: 3 IKVTTLAGKDAGKLKISDEIFGLDPREDILHRVVRWQLAKKQQGTHKTKGRSEISRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
+RQKGTGRARH + R PQ
Sbjct: 63 MYRQKGTGRARHSSARVPQ 81
>gi|83312228|ref|YP_422492.1| 50S ribosomal protein L4 [Magnetospirillum magneticum AMB-1]
gi|109893601|sp|Q2W2J2.1|RL4_MAGMM RecName: Full=50S ribosomal protein L4
gi|82947069|dbj|BAE51933.1| Ribosomal protein L4 [Magnetospirillum magneticum AMB-1]
Length = 206
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 55/77 (71%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V + N+ G + LA ++F VP+R DI+ R V WQLAKRQ G H TKTISE+SGT KKP+
Sbjct: 5 VISLDNQTVGEIELADEIFGVPVRGDILFRAVNWQLAKRQSGNHKTKTISEISGTTKKPF 64
Query: 163 RQKGTGRARHGTLRGPQ 179
QKG GRAR G+LR Q
Sbjct: 65 AQKGGGRARQGSLRSAQ 81
>gi|374291053|ref|YP_005038088.1| 50S ribosomal protein L4 [Azospirillum lipoferum 4B]
gi|357422992|emb|CBS85835.1| 50S ribosomal subunit protein L4 [Azospirillum lipoferum 4B]
Length = 209
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 55/77 (71%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N NE G + L+ VF +P R D++ R+V WQLAKR+ G H TK ISE+SGT KKP+
Sbjct: 8 IKNLNNEAVGEIELSDAVFGLPTRTDLLARMVNWQLAKRRSGNHKTKGISEISGTTKKPY 67
Query: 163 RQKGTGRARHGTLRGPQ 179
QKGTGRAR G++R PQ
Sbjct: 68 SQKGTGRARQGSIRSPQ 84
>gi|158317790|ref|YP_001510298.1| 50S ribosomal protein L4 [Frankia sp. EAN1pec]
gi|158113195|gb|ABW15392.1| ribosomal protein L4/L1e [Frankia sp. EAN1pec]
Length = 247
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 56/82 (68%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
D +PV D G + L G VFDVP+ +IH+VV QLA +QGTHSTKT EV G
Sbjct: 20 DRTVPVHAPAGGDAGSVELPGAVFDVPVNVPLIHQVVVAQLAAARQGTHSTKTRGEVRGG 79
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KP+RQKGTGRAR G+LR PQ
Sbjct: 80 GRKPYRQKGTGRARQGSLRAPQ 101
>gi|83594019|ref|YP_427771.1| 50S ribosomal protein L4 [Rhodospirillum rubrum ATCC 11170]
gi|386350771|ref|YP_006049019.1| 50S ribosomal protein L4 [Rhodospirillum rubrum F11]
gi|109893631|sp|Q2RQW1.1|RL4_RHORT RecName: Full=50S ribosomal protein L4
gi|83576933|gb|ABC23484.1| LSU ribosomal protein L4P [Rhodospirillum rubrum ATCC 11170]
gi|346719207|gb|AEO49222.1| 50S ribosomal protein L4 [Rhodospirillum rubrum F11]
Length = 206
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 56/77 (72%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ VF +P+R D++HR+VRWQLA+RQ GTH TK ISE+SGT KP+
Sbjct: 5 VKTLDGKDAGSIELSDSVFGLPVRTDLLHRMVRWQLARRQAGTHKTKGISEISGTTAKPF 64
Query: 163 RQKGTGRARHGTLRGPQ 179
+QKGTG AR G+ R PQ
Sbjct: 65 KQKGTGHARQGSKRSPQ 81
>gi|288957423|ref|YP_003447764.1| 50S ribosomal protein L4 [Azospirillum sp. B510]
gi|288909731|dbj|BAI71220.1| large subunit ribosomal protein L4 [Azospirillum sp. B510]
Length = 206
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 55/77 (71%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N NE G + L+ VF +P R D++ R+V WQLAKR+ G H TK ISE+SGT KKP+
Sbjct: 5 IKNLNNEAVGEIELSDAVFGLPARTDLLARMVNWQLAKRRSGNHKTKGISEISGTTKKPY 64
Query: 163 RQKGTGRARHGTLRGPQ 179
QKGTGRAR G++R PQ
Sbjct: 65 GQKGTGRARQGSIRSPQ 81
>gi|452965939|gb|EME70956.1| 50S ribosomal protein L4 [Magnetospirillum sp. SO-1]
Length = 206
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 55/77 (71%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V + N+ G + LA ++F +P+R DI+ R V WQLAKRQ G H TKTISE+SGT KKP+
Sbjct: 5 VISLDNQTVGEIELADEIFGLPVRGDILFRAVNWQLAKRQSGNHKTKTISEISGTTKKPF 64
Query: 163 RQKGTGRARHGTLRGPQ 179
QKG GRAR G+LR Q
Sbjct: 65 AQKGGGRARQGSLRSAQ 81
>gi|389866517|ref|YP_006368758.1| 50S ribosomal protein L4 [Modestobacter marinus]
gi|388488721|emb|CCH90299.1| 50S ribosomal protein L4 [Modestobacter marinus]
Length = 266
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 57/82 (69%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
D +PV N E G + L G++FD ++H+VV QLA +QGTHSTKT ++VSGT
Sbjct: 15 DREVPVRNAAGESTGSVTLPGELFDANANVSLMHQVVVAQLAAARQGTHSTKTRAQVSGT 74
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G KP+RQKGTGRAR G+LR PQ
Sbjct: 75 GAKPYRQKGTGRARQGSLRAPQ 96
>gi|23014087|ref|ZP_00053924.1| COG0088: Ribosomal protein L4 [Magnetospirillum magnetotacticum
MS-1]
Length = 206
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 55/77 (71%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V + N+ G + LA ++F +P+R DI+ R V WQLAKRQ G H TKTISE+SGT KKP+
Sbjct: 5 VISLDNQTVGEIELADEIFGLPVRGDILFRAVNWQLAKRQSGNHKTKTISEISGTTKKPF 64
Query: 163 RQKGTGRARHGTLRGPQ 179
QKG GRAR G+LR Q
Sbjct: 65 AQKGGGRARQGSLRSAQ 81
>gi|56417002|ref|YP_154076.1| 50S ribosomal protein L4 [Anaplasma marginale str. St. Maries]
gi|222475370|ref|YP_002563787.1| 50S ribosomal protein L4 [Anaplasma marginale str. Florida]
gi|81599118|sp|Q5PA59.1|RL4_ANAMM RecName: Full=50S ribosomal protein L4
gi|254803710|sp|B9KJ69.1|RL4_ANAMF RecName: Full=50S ribosomal protein L4
gi|56388234|gb|AAV86821.1| 50S ribosomal protein L4 [Anaplasma marginale str. St. Maries]
gi|222419508|gb|ACM49531.1| 50S ribosomal protein L4 (rplD) [Anaplasma marginale str. Florida]
Length = 208
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 57/79 (72%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N NE G + L+ +VF V +R+D++ VV WQLAKR+ GTH T+ IS+VSGT K
Sbjct: 3 VNVVNIKNEVVGKVQLSAEVFGVQLRRDVLRDVVTWQLAKRRAGTHKTRCISDVSGTTAK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQK TGRAR G+LR PQ
Sbjct: 63 PYRQKHTGRARQGSLRSPQ 81
>gi|384261633|ref|YP_005416819.1| 50S ribosomal protein L4 [Rhodospirillum photometricum DSM 122]
gi|378402733|emb|CCG07849.1| 50S ribosomal protein L4 [Rhodospirillum photometricum DSM 122]
Length = 206
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 55/77 (71%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V + G + L+ VF +P+R D++HR+VRWQLAKRQ GTH TK ISE+SGT KP+
Sbjct: 5 VKTLDGANAGSVELSEAVFGLPVRADLLHRLVRWQLAKRQAGTHKTKGISEISGTTAKPF 64
Query: 163 RQKGTGRARHGTLRGPQ 179
+QKGTG AR G+ R PQ
Sbjct: 65 KQKGTGNARQGSKRSPQ 81
>gi|347758880|ref|YP_004866442.1| 50S ribosomal protein L4 [Micavibrio aeruginosavorus ARL-13]
gi|347591398|gb|AEP10440.1| 50S ribosomal protein L4 [Micavibrio aeruginosavorus ARL-13]
Length = 207
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 56/79 (70%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N N++ G + L +F + +R DI+HR+V +QL KR+ GTH TK I EVSGTGKK
Sbjct: 3 VAVKNLQNKEVGQIDLDDAIFGMSVRNDILHRMVHFQLNKRRAGTHDTKEIGEVSGTGKK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P++QKGTG R G+LR PQ
Sbjct: 63 PFKQKGTGNGRQGSLRSPQ 81
>gi|110634029|ref|YP_674237.1| 50S ribosomal protein L4 [Chelativorans sp. BNC1]
gi|123057912|sp|Q11HQ3.1|RL4_MESSB RecName: Full=50S ribosomal protein L4
gi|110285013|gb|ABG63072.1| LSU ribosomal protein L4P [Chelativorans sp. BNC1]
Length = 206
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 61/93 (65%), Gaps = 3/93 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ VT +D G + ++ ++F + R+DI+HRVVRWQLAKRQQGTH K +E++ TG K
Sbjct: 3 LKVTTLAGKDAGKVEVSDEIFGLDPREDILHRVVRWQLAKRQQGTHKAKGRAEIARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPC 193
+RQKGTGRARH + R PQ + KA P
Sbjct: 63 MYRQKGTGRARHSSARAPQ---FRGGGKAHGPV 92
>gi|288917231|ref|ZP_06411600.1| ribosomal protein L4/L1e [Frankia sp. EUN1f]
gi|288351422|gb|EFC85630.1| ribosomal protein L4/L1e [Frankia sp. EUN1f]
Length = 247
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 55/82 (67%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
D +PV D G + L G VFDVP+ +IH+VV QLA +QGTH TKT EV G
Sbjct: 20 DRTVPVHAPAGGDAGSVELPGAVFDVPLNVPLIHQVVVAQLAAARQGTHDTKTRGEVRGG 79
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KP+RQKGTGRAR G+LR PQ
Sbjct: 80 GRKPYRQKGTGRARQGSLRAPQ 101
>gi|407779021|ref|ZP_11126281.1| 50S ribosomal protein L4 [Nitratireductor pacificus pht-3B]
gi|407299305|gb|EKF18437.1| 50S ribosomal protein L4 [Nitratireductor pacificus pht-3B]
Length = 206
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I VT D G + ++ ++F + R DI+HRVVRWQLAK+QQGTH +K +E+S TG K
Sbjct: 3 IKVTTLTGTDAGKLKISDEIFGLEPRDDILHRVVRWQLAKKQQGTHKSKGRAEISRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
++QKGTGRARH + R PQ + KA P +
Sbjct: 63 MYKQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|331268414|ref|YP_004394906.1| 50S ribosomal protein L4 [Clostridium botulinum BKT015925]
gi|329124964|gb|AEB74909.1| ribosomal protein L4/L1e [Clostridium botulinum BKT015925]
Length = 206
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + +N + G + LA VF V + D++H+VV QLA ++QGT S KT +EVSG
Sbjct: 1 MPTVDLYNREGQKVGDLQLAEAVFAVEVNADVLHQVVVAQLANKRQGTQSAKTRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
GKKPWRQKGTGRAR G++R PQ W + A KP
Sbjct: 61 GKKPWRQKGTGRARQGSIRAPQ-WIHGGIVFAPKP 94
>gi|407783108|ref|ZP_11130313.1| 50S ribosomal protein L4 [Oceanibaculum indicum P24]
gi|407203579|gb|EKE73565.1| 50S ribosomal protein L4 [Oceanibaculum indicum P24]
Length = 205
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 54/79 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N D G + L VF V +R D++ RVV WQLAKR+ G H TK ISE++GT KK
Sbjct: 3 VTVKNLEAADVGAIELDEAVFGVDVRADLLSRVVHWQLAKRRSGNHKTKGISEIAGTTKK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P++QKGTGRAR G+ R PQ
Sbjct: 63 PYKQKGTGRARQGSTRSPQ 81
>gi|253681900|ref|ZP_04862697.1| ribosomal protein, L4 [Clostridium botulinum D str. 1873]
gi|416350125|ref|ZP_11680767.1| 50S ribosomal protein L4 [Clostridium botulinum C str. Stockholm]
gi|253561612|gb|EES91064.1| ribosomal protein, L4 [Clostridium botulinum D str. 1873]
gi|338196362|gb|EGO88559.1| 50S ribosomal protein L4 [Clostridium botulinum C str. Stockholm]
Length = 206
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + +N + G + LA VF V + D++H+VV QLA ++QGT S KT +EVSG
Sbjct: 1 MPTVDLYNREGQKVGDLQLAEAVFAVEVNADVLHQVVVAQLANKRQGTQSAKTRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
GKKPWRQKGTGRAR G++R PQ W + A KP
Sbjct: 61 GKKPWRQKGTGRARQGSIRAPQ-WIHGGIVFAPKP 94
>gi|168187813|ref|ZP_02622448.1| ribosomal protein L4/L1 family [Clostridium botulinum C str.
Eklund]
gi|169294356|gb|EDS76489.1| ribosomal protein L4/L1 family [Clostridium botulinum C str.
Eklund]
Length = 206
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + +N + G + LA VF V + +D++H+VV QLA ++QG S KT +EVSG
Sbjct: 1 MPTVDLYNREGQKVGDLQLADTVFAVEVNEDVLHQVVVAQLANKRQGNQSAKTRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
GKKPWRQKGTGRAR G++R PQ W + A KP
Sbjct: 61 GKKPWRQKGTGRARQGSIRAPQ-WIHGGVVFAPKP 94
>gi|90417762|ref|ZP_01225674.1| ribosomal protein L4 [Aurantimonas manganoxydans SI85-9A1]
gi|90337434|gb|EAS51085.1| ribosomal protein L4 [Aurantimonas manganoxydans SI85-9A1]
Length = 206
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + + +D G LA D+F + R+DI+ R+VRWQLAKRQQG+H T +E++ TG K
Sbjct: 3 VTIKSLDGKDAGTATLADDIFGLEPREDILQRMVRWQLAKRQQGSHQTLGRAEIARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
+RQKGTGRARHG+ R PQ + KA P +
Sbjct: 63 LYRQKGTGRARHGSARAPQ---FRGGGKAHGPVSR 94
>gi|163796918|ref|ZP_02190875.1| 50S ribosomal protein L2 [alpha proteobacterium BAL199]
gi|159177907|gb|EDP62456.1| 50S ribosomal protein L2 [alpha proteobacterium BAL199]
Length = 206
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 56/79 (70%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ VTN E G + L +F + R+DI+ RVV WQLAKR+ G H TK+ISE+SGT KK
Sbjct: 3 LEVTNLDAEKTGEIDLDDSIFGLDPRRDILARVVNWQLAKRRSGNHKTKSISEISGTTKK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G++R Q
Sbjct: 63 PFRQKGTGRARQGSIRATQ 81
>gi|118444236|ref|YP_877199.1| 50S ribosomal protein L4 [Clostridium novyi NT]
gi|166234658|sp|A0PXU7.1|RL4_CLONN RecName: Full=50S ribosomal protein L4
gi|118134692|gb|ABK61736.1| ribosomal protein L4/L1 family [Clostridium novyi NT]
Length = 206
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + +N + G + LA VF V + +D++H+VV QLA ++QG S KT +EVSG
Sbjct: 1 MPTVDLYNIEGQKVGDLQLAETVFAVEVNEDVLHQVVVAQLANKRQGNQSAKTRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
GKKPWRQKGTGRAR G++R PQ W + A KP
Sbjct: 61 GKKPWRQKGTGRARQGSIRAPQ-WIHGGVVFAPKP 94
>gi|365854813|ref|ZP_09394878.1| 50S ribosomal protein L4 [Acetobacteraceae bacterium AT-5844]
gi|363719762|gb|EHM03061.1| 50S ribosomal protein L4 [Acetobacteraceae bacterium AT-5844]
Length = 222
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+PV N G + L DVF R DI+ RVV WQLAKR+ GTH K + EVSGT KK
Sbjct: 19 VPVITLDNGKAGDIDLPDDVFATSPRADIMARVVHWQLAKRRAGTHKVKGMGEVSGTTKK 78
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTG AR G+LR PQ
Sbjct: 79 PYRQKGTGNARQGSLRAPQ 97
>gi|325294397|ref|YP_004280911.1| 50S ribosomal protein L4 [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325064845|gb|ADY72852.1| ribosomal protein L4/L1e [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 208
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 18/141 (12%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I V N N++ G + + ++ + PI+K + V+WQLAKR++GTHSTKT EV G G
Sbjct: 1 MEIKVVNAANQEVGTVTIKDEIANAPIKKHAVWETVKWQLAKRRRGTHSTKTRGEVRGGG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ-------------GWYYNARSKAQKPCYKVE-----QEG 200
KKPW QK TGRAR G++R PQ +YY K +K + QEG
Sbjct: 61 KKPWPQKHTGRARQGSIRAPQWVGGGVVHGPKPRDYYYPLPKKVRKVALRSVVAGRLQEG 120
Query: 201 AAAWVEDCSICSSSRRKALGF 221
VED + ++A+ F
Sbjct: 121 NLIVVEDFTFEKPKTKQAIEF 141
>gi|297625783|ref|YP_003687546.1| 50S ribosomal protein L4 [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296921548|emb|CBL56102.1| 50S ribosomal protein L4 [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 233
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V N + G + L G++FD ++H+VV QLA +QGTHSTKT +EV
Sbjct: 1 MNETTSIDVVNAEGKKAGSVELPGELFDAQANVPLMHQVVTAQLAAARQGTHSTKTRAEV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
SG GKKPWRQKGTGRAR G++R PQ W S +P
Sbjct: 61 SGGGKKPWRQKGTGRARQGSIRSPQ-WAGGGISHGPQP 97
>gi|333980408|ref|YP_004518353.1| 50S ribosomal protein L4 [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823889|gb|AEG16552.1| ribosomal protein L4/L1e [Desulfotomaculum kuznetsovii DSM 6115]
Length = 208
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 53/78 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + L DVF VP+ ++H V WQLA R+ GTH TKT +EV G G+K
Sbjct: 4 VAVYNINGDQVGEIHLRDDVFGVPVHMSVLHDAVVWQLAGRRLGTHDTKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRARHG++R P
Sbjct: 64 PWRQKGTGRARHGSIRSP 81
>gi|381165702|ref|ZP_09874929.1| 50S ribosomal subunit protein L4 [Phaeospirillum molischianum DSM
120]
gi|380685192|emb|CCG39741.1| 50S ribosomal subunit protein L4 [Phaeospirillum molischianum DSM
120]
Length = 206
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 54/77 (70%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V + N+ G + LA VF +P+R DI+ R+V WQLAKR+ G H TK I E+SGT KKP+
Sbjct: 5 VISLENQTVGEIELAETVFGLPVRTDILARMVNWQLAKRRSGNHKTKGIKEISGTTKKPF 64
Query: 163 RQKGTGRARHGTLRGPQ 179
QKG GRAR G+LR PQ
Sbjct: 65 AQKGGGRARQGSLRSPQ 81
>gi|407976941|ref|ZP_11157836.1| 50S ribosomal protein L4 [Nitratireductor indicus C115]
gi|407427668|gb|EKF40357.1| 50S ribosomal protein L4 [Nitratireductor indicus C115]
Length = 206
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ VT D G + L+ ++F + R+DI+HRVVRWQLAK+Q GTH TK +E++ TG K
Sbjct: 3 LKVTTLAGADAGKLKLSDEIFGLDPREDILHRVVRWQLAKKQAGTHKTKGRAEIARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
++QKGTGRARH + R PQ + KA P +
Sbjct: 63 MYKQKGTGRARHSSARVPQ---FRGGGKAHGPVVR 94
>gi|301118172|ref|XP_002906814.1| 50S ribosomal protein L4 [Phytophthora infestans T30-4]
gi|262108163|gb|EEY66215.1| 50S ribosomal protein L4 [Phytophthora infestans T30-4]
Length = 277
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 54/71 (76%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
+D G + + G+VF P R DI+ RVVRWQLA R+ GT+ TKT SEVSG+ +KPW+QKG+G
Sbjct: 80 QDLGSISMDGEVFGAPDRVDILQRVVRWQLACRRAGTNKTKTRSEVSGSTRKPWKQKGSG 139
Query: 169 RARHGTLRGPQ 179
RAR G +R PQ
Sbjct: 140 RARVGDIRAPQ 150
>gi|426404881|ref|YP_007023852.1| 50S ribosomal protein L4 [Bdellovibrio bacteriovorus str. Tiberius]
gi|425861549|gb|AFY02585.1| 50S ribosomal protein L4 [Bdellovibrio bacteriovorus str. Tiberius]
Length = 209
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 56/76 (73%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N+ E G + LA DVF+ P++K+++H VV+WQLA R+QGTH TKT VSG GKK
Sbjct: 4 VNVLNWKKEKVGSVELAADVFETPVKKEVLHTVVQWQLAARRQGTHMTKTKGLVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLR 176
P++QKGTG AR G+ R
Sbjct: 64 PFKQKGTGGARQGSSR 79
>gi|397905104|ref|ZP_10505976.1| LSU ribosomal protein L4p (L1e) [Caloramator australicus RC3]
gi|397161899|emb|CCJ33310.1| LSU ribosomal protein L4p (L1e) [Caloramator australicus RC3]
Length = 206
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 61/95 (64%), Gaps = 4/95 (4%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + FN E G + L+ VF PI K+ +H+VV LA R+QGT S T +EVSG
Sbjct: 1 MPKVDLFNMNAEKVGEIELSDAVFGAPINKEAMHQVVVNILANRRQGTQSALTRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
GKKPWRQKGTGRARHG++R PQ W + A KP
Sbjct: 61 GKKPWRQKGTGRARHGSIRSPQ-WRHGGIVFAPKP 94
>gi|325293335|ref|YP_004279199.1| 50S ribosomal protein L4 [Agrobacterium sp. H13-3]
gi|418408668|ref|ZP_12981984.1| 50S ribosomal protein L4 [Agrobacterium tumefaciens 5A]
gi|325061188|gb|ADY64879.1| 50S ribosomal protein L4 [Agrobacterium sp. H13-3]
gi|358005582|gb|EHJ97908.1| 50S ribosomal protein L4 [Agrobacterium tumefaciens 5A]
Length = 206
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V +D G + L+ ++F + R+DI+ R+VRWQLAK+QQGTH TKT +EVS TG K
Sbjct: 3 LNVKTLEGKDAGKVSLSDEIFGLDPRQDILARMVRWQLAKKQQGTHKTKTRAEVSRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
++QKGTGRARH + R PQ + KA P +
Sbjct: 63 MYKQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|42524374|ref|NP_969754.1| 50S ribosomal protein L4 [Bdellovibrio bacteriovorus HD100]
gi|46576695|sp|P61061.1|RL4_BDEBA RecName: Full=50S ribosomal protein L4
gi|39576583|emb|CAE80747.1| 50S ribosomal protein L4 [Bdellovibrio bacteriovorus HD100]
Length = 209
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 56/76 (73%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N+ E G + LA DVF+ P++K+++H VV+WQLA R+QGTH TKT VSG GKK
Sbjct: 4 VNVLNWKKEKVGSVELAADVFETPVKKEVLHTVVQWQLAARRQGTHMTKTKGLVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLR 176
P++QKGTG AR G+ R
Sbjct: 64 PFKQKGTGGARQGSSR 79
>gi|169830437|ref|YP_001716419.1| 50S ribosomal protein L4 [Candidatus Desulforudis audaxviator
MP104C]
gi|226730652|sp|B1I1I9.1|RL4_DESAP RecName: Full=50S ribosomal protein L4
gi|169637281|gb|ACA58787.1| ribosomal protein L4/L1e [Candidatus Desulforudis audaxviator
MP104C]
Length = 207
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN + G + L+ VF P+ ++H VV QLA R+QGTH TKT SEV G
Sbjct: 1 MPTAAVFNIEGQQVGEIELSEAVFGQPVNDAVLHEVVVMQLANRRQGTHDTKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGP 178
G+KPWRQKGTGRARHGT+R P
Sbjct: 61 GRKPWRQKGTGRARHGTIRSP 81
>gi|392944817|ref|ZP_10310459.1| 50S ribosomal protein L4, bacterial/organelle [Frankia sp. QA3]
gi|392288111|gb|EIV94135.1| 50S ribosomal protein L4, bacterial/organelle [Frankia sp. QA3]
Length = 236
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 52/70 (74%)
Query: 110 DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGR 169
D G + L G VFDVP+ +IH+VV QLA +QGTH+TKT EV G G+KP+RQKGTGR
Sbjct: 27 DGGSVELPGGVFDVPLNVPLIHQVVVAQLAAARQGTHATKTRGEVRGGGRKPYRQKGTGR 86
Query: 170 ARHGTLRGPQ 179
AR G+LR PQ
Sbjct: 87 ARQGSLRAPQ 96
>gi|319783321|ref|YP_004142797.1| 50S ribosomal protein L4 [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169209|gb|ADV12747.1| ribosomal protein L4/L1e [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 206
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L+ ++F + R+DI+ RVVRWQLAK+QQGTH TK +E++ TG K
Sbjct: 3 LKITTLGGKDAGKVELSDEIFGLDPREDILQRVVRWQLAKKQQGTHKTKGRAEIARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
++QKGTGRARH + R PQ + KA P +
Sbjct: 63 MYKQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|15889241|ref|NP_354922.1| 50S ribosomal protein L4 [Agrobacterium fabrum str. C58]
gi|46576833|sp|Q8UE19.1|RL4_AGRT5 RecName: Full=50S ribosomal protein L4
gi|15157068|gb|AAK87707.1| 50S ribosomal protein L4 [Agrobacterium fabrum str. C58]
Length = 206
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V +D G + L+ ++F + R+DI+ R+VRWQLAK+QQGTH TK SEVS TG K
Sbjct: 3 LNVKTLEGKDAGKVSLSDEIFGLDPRQDILARMVRWQLAKKQQGTHKTKNRSEVSRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
++QKGTGRARH + R PQ + KA P +
Sbjct: 63 MYKQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|335036156|ref|ZP_08529483.1| 50S ribosomal protein L4 [Agrobacterium sp. ATCC 31749]
gi|333792047|gb|EGL63417.1| 50S ribosomal protein L4 [Agrobacterium sp. ATCC 31749]
Length = 206
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V +D G + L+ ++F + R+DI+ R+VRWQLAK+QQGTH TK SEVS TG K
Sbjct: 3 LNVKTLEGKDAGKVSLSDEIFGLDPRQDILARMVRWQLAKKQQGTHKTKNRSEVSRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
++QKGTGRARH + R PQ + KA P +
Sbjct: 63 MYKQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|348688832|gb|EGZ28646.1| hypothetical protein PHYSODRAFT_552366 [Phytophthora sojae]
Length = 277
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 55/72 (76%)
Query: 108 NEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGT 167
+++ G + + G+VF P R DI+ RVVRWQLA R+ GT+ TKT SEVSG+ +KPW+QKG+
Sbjct: 79 SQELGTVTMDGEVFGAPDRVDILQRVVRWQLACRRAGTNKTKTRSEVSGSTRKPWKQKGS 138
Query: 168 GRARHGTLRGPQ 179
GRAR G +R PQ
Sbjct: 139 GRARVGDIRAPQ 150
>gi|329114216|ref|ZP_08242978.1| 50S ribosomal protein L4 [Acetobacter pomorum DM001]
gi|326696292|gb|EGE47971.1| 50S ribosomal protein L4 [Acetobacter pomorum DM001]
Length = 204
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 52/81 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I + N G L ++F V R DI+ RVV WQLAKR+ GTH K + EVSGT
Sbjct: 1 MEIEIKTLDNSSAGSATLPDEIFAVAPRADIMARVVHWQLAKRRAGTHKVKGMGEVSGTT 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KKP+RQKGTG AR G+LR PQ
Sbjct: 61 KKPYRQKGTGSARQGSLRAPQ 81
>gi|258513641|ref|YP_003189863.1| 50S ribosomal protein L4 [Desulfotomaculum acetoxidans DSM 771]
gi|257777346|gb|ACV61240.1| ribosomal protein L4/L1e [Desulfotomaculum acetoxidans DSM 771]
Length = 206
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN E G + L +VF + + + ++H V QLA R+QGTH TKT EV G
Sbjct: 1 MPTVALFNIKGEQVGEVALKDEVFGIEVNESVLHDAVVMQLAGRRQGTHDTKTRGEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGP 178
GKKPWRQKGTGRARHGT+R P
Sbjct: 61 GKKPWRQKGTGRARHGTIRSP 81
>gi|111220547|ref|YP_711341.1| 50S ribosomal protein L4 [Frankia alni ACN14a]
gi|111148079|emb|CAJ59747.1| 50S ribosomal protein L4 [Frankia alni ACN14a]
Length = 236
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 51/70 (72%)
Query: 110 DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGR 169
D G L G VFDVP+ +IH+VV QLA +QGTH+TKT EV G G+KP+RQKGTGR
Sbjct: 27 DGGSAELPGGVFDVPLNVPLIHQVVVAQLAAARQGTHATKTRGEVRGGGRKPYRQKGTGR 86
Query: 170 ARHGTLRGPQ 179
AR G+LR PQ
Sbjct: 87 ARQGSLRAPQ 96
>gi|258542028|ref|YP_003187461.1| 50S ribosomal protein L4 [Acetobacter pasteurianus IFO 3283-01]
gi|384041949|ref|YP_005480693.1| 50S ribosomal protein L4 [Acetobacter pasteurianus IFO 3283-12]
gi|384050464|ref|YP_005477527.1| 50S ribosomal protein L4 [Acetobacter pasteurianus IFO 3283-03]
gi|384053574|ref|YP_005486668.1| 50S ribosomal protein L4 [Acetobacter pasteurianus IFO 3283-07]
gi|384056806|ref|YP_005489473.1| 50S ribosomal protein L4 [Acetobacter pasteurianus IFO 3283-22]
gi|384059447|ref|YP_005498575.1| 50S ribosomal protein L4 [Acetobacter pasteurianus IFO 3283-26]
gi|384062741|ref|YP_005483383.1| 50S ribosomal protein L4 [Acetobacter pasteurianus IFO 3283-32]
gi|384118817|ref|YP_005501441.1| 50S ribosomal protein L4 [Acetobacter pasteurianus IFO 3283-01-42C]
gi|421848614|ref|ZP_16281601.1| LSU ribosomal protein L4P [Acetobacter pasteurianus NBRC 101655]
gi|421851615|ref|ZP_16284308.1| LSU ribosomal protein L4P [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|256633106|dbj|BAH99081.1| LSU ribosomal protein L4P [Acetobacter pasteurianus IFO 3283-01]
gi|256636163|dbj|BAI02132.1| LSU ribosomal protein L4P [Acetobacter pasteurianus IFO 3283-03]
gi|256639218|dbj|BAI05180.1| LSU ribosomal protein L4P [Acetobacter pasteurianus IFO 3283-07]
gi|256642272|dbj|BAI08227.1| LSU ribosomal protein L4P [Acetobacter pasteurianus IFO 3283-22]
gi|256645327|dbj|BAI11275.1| LSU ribosomal protein L4P [Acetobacter pasteurianus IFO 3283-26]
gi|256648382|dbj|BAI14323.1| LSU ribosomal protein L4P [Acetobacter pasteurianus IFO 3283-32]
gi|256651435|dbj|BAI17369.1| LSU ribosomal protein L4P [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654426|dbj|BAI20353.1| LSU ribosomal protein L4P [Acetobacter pasteurianus IFO 3283-12]
gi|371460494|dbj|GAB26804.1| LSU ribosomal protein L4P [Acetobacter pasteurianus NBRC 101655]
gi|371480118|dbj|GAB29511.1| LSU ribosomal protein L4P [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 204
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 52/81 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I + N G L ++F V R DI+ RVV WQLAKR+ GTH K + EVSGT
Sbjct: 1 MEIEIKTLDNSSAGSATLPDEIFAVAPRADIMARVVHWQLAKRRAGTHKVKGMGEVSGTT 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KKP+RQKGTG AR G+LR PQ
Sbjct: 61 KKPYRQKGTGSARQGSLRAPQ 81
>gi|28212174|ref|NP_783118.1| 50S ribosomal protein L4 [Clostridium tetani E88]
gi|46577246|sp|Q890P0.1|RL4_CLOTE RecName: Full=50S ribosomal protein L4
gi|28204618|gb|AAO37055.1| LSU ribosomal protein L1E(= L4P) [Clostridium tetani E88]
Length = 206
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G L+ VF V + K+++H+V+ QLA ++QGT S+KT +EVSG
Sbjct: 1 MPTVGLFNKEGQKVGDFQLSDKVFGVEVNKEVLHQVIVAQLANKRQGTQSSKTRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
G+KPWRQKGTGRAR G++R PQ W A KP
Sbjct: 61 GRKPWRQKGTGRARQGSIRAPQ-WIKGGVVFAPKP 94
>gi|144900885|emb|CAM77749.1| 50S ribosomal protein L4 [Magnetospirillum gryphiswaldense MSR-1]
Length = 205
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 56/77 (72%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V + N+ G + L+ DVF + +R D++HR+V +QL+KR+ GTH TK ISE+SGT KKP+
Sbjct: 5 VISLDNQSVGEIDLSDDVFGLAVRNDLLHRMVSYQLSKRRSGTHKTKGISEISGTTKKPF 64
Query: 163 RQKGTGRARHGTLRGPQ 179
QKG GRAR G+LR Q
Sbjct: 65 NQKGGGRARQGSLRSAQ 81
>gi|145351929|ref|XP_001420312.1| Putative mitochondrial ribosomal protein L4 [Ostreococcus
lucimarinus CCE9901]
gi|144580546|gb|ABO98605.1| Putative mitochondrial ribosomal protein L4 [Ostreococcus
lucimarinus CCE9901]
Length = 224
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 59/86 (68%)
Query: 94 GLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISE 153
G +D V+PV +F E +G + L G +FD P+R D+ HRVVRWQ AK ++G H TK+ E
Sbjct: 12 GRGEDAVVPVYSFDGEARGSVELPGRIFDQPLRVDVAHRVVRWQRAKARKGLHKTKSRGE 71
Query: 154 VSGTGKKPWRQKGTGRARHGTLRGPQ 179
V+G+ +K QKG+GRAR G L+ PQ
Sbjct: 72 VAGSTRKVRPQKGSGRARVGNLKAPQ 97
>gi|54022701|ref|YP_116943.1| 50S ribosomal protein L4 [Nocardia farcinica IFM 10152]
gi|81603036|sp|Q5Z1W2.1|RL4_NOCFA RecName: Full=50S ribosomal protein L4
gi|54014209|dbj|BAD55579.1| putative ribosomal protein L4 [Nocardia farcinica IFM 10152]
Length = 230
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 56/82 (68%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+LV+PV + G + L ++FDV ++H+VV QLA +QGTH+TKT EVSG
Sbjct: 15 NLVLPVKEAGGKSNGTVELPAEIFDVTANIALMHQVVTAQLAAARQGTHATKTRGEVSGG 74
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
GKKP+RQKGTGRAR G+ R PQ
Sbjct: 75 GKKPYRQKGTGRARQGSTRAPQ 96
>gi|222148367|ref|YP_002549324.1| 50S ribosomal protein L4 [Agrobacterium vitis S4]
gi|254803708|sp|B9JVN8.1|RL4_AGRVS RecName: Full=50S ribosomal protein L4
gi|221735355|gb|ACM36318.1| 50S ribosomal protein L4 [Agrobacterium vitis S4]
Length = 206
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V D G + L+ +F + R+DII R+VRWQLAK+QQGTH TKT +EVS TG K
Sbjct: 3 LNVKTLEGTDAGTVSLSDAIFGLEPRQDIIARMVRWQLAKKQQGTHKTKTRAEVSRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
++QKGTGRARH + R PQ + KA P +
Sbjct: 63 MYKQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|162149173|ref|YP_001603634.1| 50S ribosomal protein L4 [Gluconacetobacter diazotrophicus PAl 5]
gi|209545083|ref|YP_002277312.1| 50S ribosomal protein L4 [Gluconacetobacter diazotrophicus PAl 5]
gi|189029506|sp|A9H3R2.1|RL4_GLUDA RecName: Full=50S ribosomal protein L4
gi|161787750|emb|CAP57346.1| 50S ribosomal protein L4 [Gluconacetobacter diazotrophicus PAl 5]
gi|209532760|gb|ACI52697.1| ribosomal protein L4/L1e [Gluconacetobacter diazotrophicus PAl 5]
Length = 204
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 51/77 (66%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N G VL ++F V R DI+ RVV WQLAKR+ GTH K + EVSGT KKP+
Sbjct: 5 IKTLDNGSAGTAVLPDEIFGVTPRADIMARVVHWQLAKRRAGTHKVKGMGEVSGTTKKPY 64
Query: 163 RQKGTGRARHGTLRGPQ 179
RQKGTG AR G+LR PQ
Sbjct: 65 RQKGTGSARQGSLRAPQ 81
>gi|395205593|ref|ZP_10396224.1| ribosomal protein L4/L1 family protein [Propionibacterium humerusii
P08]
gi|422441402|ref|ZP_16518212.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL037PA3]
gi|422472412|ref|ZP_16548900.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL037PA2]
gi|422572102|ref|ZP_16647673.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL044PA1]
gi|313836022|gb|EFS73736.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL037PA2]
gi|314929561|gb|EFS93392.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL044PA1]
gi|314970554|gb|EFT14652.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL037PA3]
gi|328906229|gb|EGG26004.1| ribosomal protein L4/L1 family protein [Propionibacterium humerusii
P08]
Length = 301
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 56/85 (65%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V + + G L GDVFDV +IH+VV QLA +QGTH+TKT +V
Sbjct: 1 MNETKTIDVLDVKGKKAGSAELPGDVFDVNTNIPLIHQVVVAQLAAARQGTHATKTRGQV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
SG GKKPWRQKGTGRAR G+ R PQ
Sbjct: 61 SGGGKKPWRQKGTGRARQGSTRAPQ 85
>gi|91205876|ref|YP_538231.1| 50S ribosomal protein L4 [Rickettsia bellii RML369-C]
gi|157826765|ref|YP_001495829.1| 50S ribosomal protein L4 [Rickettsia bellii OSU 85-389]
gi|109893633|sp|Q1RHM2.1|RL4_RICBR RecName: Full=50S ribosomal protein L4
gi|166199856|sp|A8GVB5.1|RL4_RICB8 RecName: Full=50S ribosomal protein L4
gi|91069420|gb|ABE05142.1| 50S ribosomal protein L4 [Rickettsia bellii RML369-C]
gi|157802069|gb|ABV78792.1| 50S ribosomal protein L4 [Rickettsia bellii OSU 85-389]
Length = 207
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ N NE+ G + L D+F V IR DII +VV WQ AK GTH TKT+SEVSGT KKP
Sbjct: 5 ILNLANEEIGEISLNEDIFAVEFIRDDIIKQVVDWQRAKAMAGTHKTKTVSEVSGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQ 179
++QKGTG AR G+LR Q
Sbjct: 65 FKQKGTGNARQGSLRSVQ 82
>gi|300120113|emb|CBK19667.2| unnamed protein product [Blastocystis hominis]
Length = 162
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 51/67 (76%)
Query: 113 FMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARH 172
+ L VF +P+R+DI+ RVV WQLAKR+QGTH KT+SEVSG+ +KP+ QKGTGRAR
Sbjct: 10 LVTLNNRVFGMPLREDILQRVVVWQLAKRRQGTHCVKTLSEVSGSNRKPFPQKGTGRARQ 69
Query: 173 GTLRGPQ 179
G R PQ
Sbjct: 70 GQKRAPQ 76
>gi|269958585|ref|YP_003328372.1| 50S ribosomal protein L4 [Anaplasma centrale str. Israel]
gi|269848414|gb|ACZ49058.1| 50S ribosomal protein L4 [Anaplasma centrale str. Israel]
Length = 208
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 53/79 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N NE G + L VF V R+D++ VV WQLAKR+ GTH T+ IS+V GT K
Sbjct: 3 VNVVNIKNEVVGQLELNASVFGVQPRRDVLRDVVDWQLAKRRAGTHKTRCISDVRGTTAK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQK TGRAR G+LR PQ
Sbjct: 63 PYRQKHTGRARQGSLRSPQ 81
>gi|15965110|ref|NP_385463.1| 50S ribosomal protein L4 [Sinorhizobium meliloti 1021]
gi|334315896|ref|YP_004548515.1| 50S ribosomal protein L4 [Sinorhizobium meliloti AK83]
gi|384529068|ref|YP_005713156.1| 50S ribosomal protein L4 [Sinorhizobium meliloti BL225C]
gi|384536652|ref|YP_005720737.1| 50S ribosomal protein L4 [Sinorhizobium meliloti SM11]
gi|407720297|ref|YP_006839959.1| 50S ribosomal protein L4 [Sinorhizobium meliloti Rm41]
gi|418404902|ref|ZP_12978340.1| 50S ribosomal protein L4 [Sinorhizobium meliloti CCNWSX0020]
gi|433613128|ref|YP_007189926.1| 50S ribosomal protein L4, bacterial/organelle [Sinorhizobium
meliloti GR4]
gi|46577284|sp|Q92QG9.1|RL4_RHIME RecName: Full=50S ribosomal protein L4
gi|15074290|emb|CAC45936.1| Probable 50S ribosomal protein L4 [Sinorhizobium meliloti 1021]
gi|333811244|gb|AEG03913.1| ribosomal protein L4/L1e [Sinorhizobium meliloti BL225C]
gi|334094890|gb|AEG52901.1| ribosomal protein L4/L1e [Sinorhizobium meliloti AK83]
gi|336033544|gb|AEH79476.1| 50S ribosomal protein L4 [Sinorhizobium meliloti SM11]
gi|359501166|gb|EHK73790.1| 50S ribosomal protein L4 [Sinorhizobium meliloti CCNWSX0020]
gi|407318529|emb|CCM67133.1| 50S ribosomal protein L4 [Sinorhizobium meliloti Rm41]
gi|429551318|gb|AGA06327.1| 50S ribosomal protein L4, bacterial/organelle [Sinorhizobium
meliloti GR4]
Length = 206
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V +D G + L+ +F + R+DII RVVRWQLAKRQQGTH +K +EVS TG K
Sbjct: 3 LTVKTLEGKDAGKVSLSDAIFGLEPREDIIARVVRWQLAKRQQGTHKSKGRAEVSRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
++QKGTGRARH + R PQ + KA P +
Sbjct: 63 MYKQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|20808659|ref|NP_623830.1| 50S ribosomal protein L4 [Thermoanaerobacter tengcongensis MB4]
gi|46577279|sp|Q8R7V5.1|RL4_THETN RecName: Full=50S ribosomal protein L4
gi|20517293|gb|AAM25434.1| Ribosomal protein L4 [Thermoanaerobacter tengcongensis MB4]
Length = 206
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 53/79 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+PV N E G + L VF VP+ ++H+ V LA ++QGTHSTKT EV G G+K
Sbjct: 4 VPVYNVKGEQVGEIELKDSVFGVPVNVAVMHQAVVNYLANQRQGTHSTKTRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G++R PQ
Sbjct: 64 PWRQKGTGRARQGSIRAPQ 82
>gi|288574663|ref|ZP_06393020.1| ribosomal protein L4/L1e [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570404|gb|EFC91961.1| ribosomal protein L4/L1e [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 206
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + E G + L+G+VFDVP+ +H+VV QLA R+QGTH TK +V G GKK
Sbjct: 4 IKLVTITGESTGELSLSGNVFDVPLHVPAMHQVVVAQLANRRQGTHCTKGRGDVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP-CYKVEQEGAAAWVEDCSICSSSRRKA- 218
PWRQK TGRARHG+ R P W + KP Y+ + + CS S R A
Sbjct: 64 PWRQKHTGRARHGSSRSPI-WVGGGVTHGPKPRNYRQKVNKKVRRLAICSALSQKIRDAQ 122
Query: 219 -LGF 221
+GF
Sbjct: 123 LMGF 126
>gi|408785477|ref|ZP_11197222.1| 50S ribosomal protein L4 [Rhizobium lupini HPC(L)]
gi|417859621|ref|ZP_12504677.1| 50S ribosomal protein L4 [Agrobacterium tumefaciens F2]
gi|418299388|ref|ZP_12911222.1| 50S ribosomal protein L4 [Agrobacterium tumefaciens CCNWGS0286]
gi|424910713|ref|ZP_18334090.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|338822685|gb|EGP56653.1| 50S ribosomal protein L4 [Agrobacterium tumefaciens F2]
gi|355535189|gb|EHH04479.1| 50S ribosomal protein L4 [Agrobacterium tumefaciens CCNWGS0286]
gi|392846744|gb|EJA99266.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|408488625|gb|EKJ96934.1| 50S ribosomal protein L4 [Rhizobium lupini HPC(L)]
Length = 206
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V +D G + L+ ++F + R+DI+ R+VRWQLAK+QQGTH +K SEVS TG K
Sbjct: 3 LNVKTLEGKDAGKVSLSDEIFGLDPRQDILARMVRWQLAKKQQGTHKSKNRSEVSRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
++QKGTGRARH + R PQ + KA P +
Sbjct: 63 MYKQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|304391027|ref|ZP_07372979.1| ribosomal protein L4/L1 family protein [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304325910|gb|EFL93156.1| ribosomal protein L4/L1 family protein [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 214
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 51/68 (75%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L G+VFD+ ++H+VV QLA +QGTH+TKT +VSG GKKPWRQKGTGRAR
Sbjct: 18 GTVELPGEVFDLDFNNPLVHQVVNAQLAAARQGTHATKTRGDVSGGGKKPWRQKGTGRAR 77
Query: 172 HGTLRGPQ 179
G++R PQ
Sbjct: 78 QGSIRAPQ 85
>gi|120402317|ref|YP_952146.1| 50S ribosomal protein L4 [Mycobacterium vanbaalenii PYR-1]
gi|119955135|gb|ABM12140.1| LSU ribosomal protein L4P [Mycobacterium vanbaalenii PYR-1]
Length = 219
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 56/83 (67%)
Query: 97 QDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSG 156
+D IPV + G + L ++FDV ++H+VV QLA ++QGTHSTKT EVSG
Sbjct: 4 EDRKIPVRTPAGKTDGSIELPAELFDVEPNIALMHQVVNAQLAAKRQGTHSTKTRGEVSG 63
Query: 157 TGKKPWRQKGTGRARHGTLRGPQ 179
GKKP+RQKGTGRAR G+ R PQ
Sbjct: 64 GGKKPYRQKGTGRARQGSTRAPQ 86
>gi|298345471|ref|YP_003718158.1| 50S ribosomal protein L4 [Mobiluncus curtisii ATCC 43063]
gi|315656194|ref|ZP_07909085.1| 50S ribosomal protein L4 [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|298235532|gb|ADI66664.1| 50S ribosomal protein L4 [Mobiluncus curtisii ATCC 43063]
gi|315493196|gb|EFU82796.1| 50S ribosomal protein L4 [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 214
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 51/68 (75%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L G+VFD+ ++H+VV QLA +QGTH+TKT +VSG GKKPWRQKGTGRAR
Sbjct: 18 GTVELPGEVFDLDFNNPLVHQVVNAQLAAARQGTHATKTRGDVSGGGKKPWRQKGTGRAR 77
Query: 172 HGTLRGPQ 179
G++R PQ
Sbjct: 78 QGSIRAPQ 85
>gi|150396208|ref|YP_001326675.1| 50S ribosomal protein L4 [Sinorhizobium medicae WSM419]
gi|166199909|sp|A6U860.1|RL4_SINMW RecName: Full=50S ribosomal protein L4
gi|150027723|gb|ABR59840.1| ribosomal protein L4/L1e [Sinorhizobium medicae WSM419]
Length = 206
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V +D G + L+ +F + R+DII RVVRWQLAKRQQGTH K +EVS TG K
Sbjct: 3 LTVKTLEGKDAGKVSLSDAIFGLEPREDIIARVVRWQLAKRQQGTHKAKGRAEVSRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
++QKGTGRARH + R PQ + KA P +
Sbjct: 63 MYKQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|332798207|ref|YP_004459706.1| 50S ribosomal protein L4 [Tepidanaerobacter acetatoxydans Re1]
gi|438001126|ref|YP_007270869.1| LSU ribosomal protein L4p (L1e) [Tepidanaerobacter acetatoxydans
Re1]
gi|332695942|gb|AEE90399.1| ribosomal protein L4/L1e [Tepidanaerobacter acetatoxydans Re1]
gi|432177920|emb|CCP24893.1| LSU ribosomal protein L4p (L1e) [Tepidanaerobacter acetatoxydans
Re1]
Length = 208
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 56/81 (69%), Gaps = 3/81 (3%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN E G + L+ DVF V +R DI+HR V LA ++QGT +T T +EV+G
Sbjct: 1 MPKVTLFNIAGEQIGEIELSDDVFGVEVRPDIMHRAVVNYLANQRQGTANTLTRAEVAGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGP 178
G+KPWRQKGTGRARHG++R P
Sbjct: 61 GRKPWRQKGTGRARHGSIRSP 81
>gi|315655880|ref|ZP_07908778.1| 50S ribosomal protein L4 [Mobiluncus curtisii ATCC 51333]
gi|315489944|gb|EFU79571.1| 50S ribosomal protein L4 [Mobiluncus curtisii ATCC 51333]
Length = 214
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 51/68 (75%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L G+VFD+ ++H+VV QLA +QGTH+TKT +VSG GKKPWRQKGTGRAR
Sbjct: 18 GTVELPGEVFDLDFNNPLVHQVVNAQLAAARQGTHATKTRGDVSGGGKKPWRQKGTGRAR 77
Query: 172 HGTLRGPQ 179
G++R PQ
Sbjct: 78 QGSIRAPQ 85
>gi|319789239|ref|YP_004150872.1| ribosomal protein L4/L1e [Thermovibrio ammonificans HB-1]
gi|317113741|gb|ADU96231.1| ribosomal protein L4/L1e [Thermovibrio ammonificans HB-1]
Length = 208
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 75/141 (53%), Gaps = 18/141 (12%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I V + N++ G + + ++ + PI++ + V+WQLAKR++GTHSTKT EV G G
Sbjct: 1 MEIKVVDLNNKETGTVQIKDEIANAPIKQHAVWETVKWQLAKRRRGTHSTKTRGEVRGGG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ-------------GWYYNARSKAQKPCYKVE-----QEG 200
+KPW QK TGRAR G++R PQ + YN K +K K QEG
Sbjct: 61 RKPWPQKHTGRARQGSIRAPQWVGGGVVHGPKPRDYSYNLPKKVRKVALKSVVAGRIQEG 120
Query: 201 AAAWVEDCSICSSSRRKALGF 221
VED S ++A+ F
Sbjct: 121 NFIVVEDFSFEKPKTKQAVEF 141
>gi|407642013|ref|YP_006805772.1| 50S ribosomal protein L4 [Nocardia brasiliensis ATCC 700358]
gi|407304897|gb|AFT98797.1| 50S ribosomal protein L4 [Nocardia brasiliensis ATCC 700358]
Length = 224
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 55/82 (67%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L +PV + G + L ++FDV ++H+VV QLA +QGTHSTKT EVSG
Sbjct: 9 NLTLPVKEPGGKTNGTVELPAEIFDVTANVALMHQVVTAQLAAARQGTHSTKTRGEVSGG 68
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
GKKP+RQKGTGRAR G+ R PQ
Sbjct: 69 GKKPYRQKGTGRARQGSTRAPQ 90
>gi|163868649|ref|YP_001609858.1| 50S ribosomal protein L4 [Bartonella tribocorum CIP 105476]
gi|189029491|sp|A9IW26.1|RL4_BART1 RecName: Full=50S ribosomal protein L4
gi|161018305|emb|CAK01863.1| 50S ribosomal protein L4 [Bartonella tribocorum CIP 105476]
Length = 206
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 64/98 (65%), Gaps = 5/98 (5%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + + G + ++ +FD+ R+DI+ RVVRWQLA+RQQGTH ++ S+VS T
Sbjct: 2 DLVIKTLD--GHEAGKLKVSESIFDLVPREDILQRVVRWQLARRQQGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
G K ++QKGTGRARH + R PQ + KA P ++
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQ---FRGGGKAHGPVFR 94
>gi|420241691|ref|ZP_14745801.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium sp. CF080]
gi|398069950|gb|EJL61275.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium sp. CF080]
Length = 206
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ ++F + R+DI+ R+VRWQLAK+QQGTH TK +EVS TG K +
Sbjct: 5 VKTLEGKDAGKVALSDEIFGLDPREDILARMVRWQLAKKQQGTHKTKGRAEVSRTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
+QKGTGRARH + R PQ + KA P +
Sbjct: 65 KQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|58038854|ref|YP_190818.1| 50S ribosomal protein L4 [Gluconobacter oxydans 621H]
gi|81557183|sp|Q5FTY4.1|RL4_GLUOX RecName: Full=50S ribosomal protein L4
gi|58001268|gb|AAW60162.1| LSU ribosomal protein L4P [Gluconobacter oxydans 621H]
Length = 204
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 52/77 (67%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N G + L ++F V R DI+ RVV WQLAKR+ GTH TK + E+SGT KKP+
Sbjct: 5 IKTLDNGSAGSVALPEEIFAVTPRSDIMARVVHWQLAKRRAGTHRTKGMGEISGTTKKPY 64
Query: 163 RQKGTGRARHGTLRGPQ 179
RQKGTG AR G+LR PQ
Sbjct: 65 RQKGTGSARQGSLRAPQ 81
>gi|296533988|ref|ZP_06896504.1| ribosomal protein L4/L1 family protein [Roseomonas cervicalis ATCC
49957]
gi|296265654|gb|EFH11763.1| ribosomal protein L4/L1 family protein [Roseomonas cervicalis ATCC
49957]
Length = 206
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+PV N G + L +F R DI+ RVV WQLAKR+ GTH K + EVSGT KK
Sbjct: 3 LPVITLDNGQAGEIDLPDALFAAAPRADIMARVVHWQLAKRRAGTHKVKGMGEVSGTTKK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTG AR G+LR PQ
Sbjct: 63 PYRQKGTGNARQGSLRAPQ 81
>gi|258512669|ref|YP_003186103.1| 50S ribosomal protein L4 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479395|gb|ACV59714.1| ribosomal protein L4/L1e [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 206
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 54/79 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + L +F PIR D++H VV LA R++GTH TKT +EVSG G+K
Sbjct: 4 VAVLNTAGQQVGEIELNEKIFGAPIRPDLMHIVVLQYLAARRRGTHKTKTRAEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G++R PQ
Sbjct: 64 PWRQKGTGRARQGSIRAPQ 82
>gi|218290004|ref|ZP_03494181.1| ribosomal protein L4/L1e [Alicyclobacillus acidocaldarius LAA1]
gi|218239989|gb|EED07176.1| ribosomal protein L4/L1e [Alicyclobacillus acidocaldarius LAA1]
Length = 206
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 54/79 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + L +F PIR D++H VV LA R++GTH TKT +EVSG G+K
Sbjct: 4 VAVLNTAGQQVGEIELNEKIFGAPIRPDLMHIVVLQYLAARRRGTHKTKTRAEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G++R PQ
Sbjct: 64 PWRQKGTGRARQGSIRAPQ 82
>gi|398353244|ref|YP_006398708.1| 50S ribosomal protein L4 [Sinorhizobium fredii USDA 257]
gi|390128570|gb|AFL51951.1| 50S ribosomal protein L4 [Sinorhizobium fredii USDA 257]
Length = 206
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V +D G + L+ +F + R+DII RV+RWQLAKRQQGTH K +EVS TG K
Sbjct: 3 LTVKTLEGKDAGKVSLSDAIFGLEPREDIIARVIRWQLAKRQQGTHKAKGRAEVSRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
++QKGTGRARH + R PQ + KA P +
Sbjct: 63 MYKQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|254796648|ref|YP_003081484.1| ribosomal protein L4/L1 family [Neorickettsia risticii str.
Illinois]
gi|254589885|gb|ACT69247.1| ribosomal protein L4/L1 family [Neorickettsia risticii str.
Illinois]
Length = 214
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 52/76 (68%), Gaps = 6/76 (7%)
Query: 110 DKGFMVLAGDV------FDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWR 163
D G LAG V + P R D++ V+ WQLAKR+ GTH TK ISEVSGT +KP+R
Sbjct: 10 DFGATSLAGSVAVDRALIEAPFRPDLLSLVINWQLAKRRAGTHKTKGISEVSGTTRKPYR 69
Query: 164 QKGTGRARHGTLRGPQ 179
QKGTGRAR G+LR PQ
Sbjct: 70 QKGTGRARQGSLRAPQ 85
>gi|340776597|ref|ZP_08696540.1| 50S ribosomal protein L4 [Acetobacter aceti NBRC 14818]
Length = 204
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N G L ++F V R DI+ RVV WQLAKR+ GTH K + EVSGT KK
Sbjct: 3 LDIKTLDNGSAGTATLPDEIFAVAPRADIMARVVHWQLAKRRAGTHKVKGMGEVSGTTKK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTG AR G+LR PQ
Sbjct: 63 PYRQKGTGSARQGSLRAPQ 81
>gi|337269080|ref|YP_004613135.1| 50S ribosomal protein L4/L1e [Mesorhizobium opportunistum WSM2075]
gi|336029390|gb|AEH89041.1| ribosomal protein L4/L1e [Mesorhizobium opportunistum WSM2075]
Length = 206
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L+ ++F + R+DI+ RVVRWQLAK+QQGTH K +E++ TG K
Sbjct: 3 LKITTLGGKDAGKVKLSEEIFGLDPREDILQRVVRWQLAKKQQGTHKAKGRAEIARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
++QKGTGRARH + R PQ + KA P +
Sbjct: 63 MYKQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|13470552|ref|NP_102121.1| 50S ribosomal protein L4 [Mesorhizobium loti MAFF303099]
gi|46577286|sp|Q98N56.1|RL4_RHILO RecName: Full=50S ribosomal protein L4
gi|14021294|dbj|BAB47907.1| 50S ribosomal protein L4 [Mesorhizobium loti MAFF303099]
Length = 206
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L+ ++F + R+DI+ RVVRWQLAK+QQGTH K +E++ TG K
Sbjct: 3 LKITTLGGKDAGKVKLSEEIFGLDPREDILQRVVRWQLAKKQQGTHKAKGRAEIARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
++QKGTGRARH + R PQ + KA P +
Sbjct: 63 MYKQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|357028808|ref|ZP_09090833.1| 50S ribosomal protein L4 [Mesorhizobium amorphae CCNWGS0123]
gi|355537508|gb|EHH06764.1| 50S ribosomal protein L4 [Mesorhizobium amorphae CCNWGS0123]
Length = 206
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L+ ++F + R+DI+ RVVRWQLAK+QQGTH K +E++ TG K
Sbjct: 3 LKITTLGGKDAGKVKLSEEIFGLDPREDILQRVVRWQLAKKQQGTHKAKGRAEIARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
++QKGTGRARH + R PQ + KA P +
Sbjct: 63 MYKQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|419419754|ref|ZP_13959987.1| ribosomal protein, L4/L1 family [Propionibacterium acnes PRP-38]
gi|422395713|ref|ZP_16475746.1| 50S ribosomal protein L4 [Propionibacterium acnes HL097PA1]
gi|327332710|gb|EGE74444.1| 50S ribosomal protein L4 [Propionibacterium acnes HL097PA1]
gi|379979475|gb|EIA12795.1| ribosomal protein, L4/L1 family [Propionibacterium acnes PRP-38]
Length = 301
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 56/85 (65%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V + + G L GD+FDV +IH+VV QLA +QGTH+TKT +V
Sbjct: 1 MNETKTIDVLDVKGKKAGSAELPGDLFDVNTNIPLIHQVVVAQLAAARQGTHATKTRGQV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
SG GKKPWRQKGTGRAR G+ R PQ
Sbjct: 61 SGGGKKPWRQKGTGRARQGSTRAPQ 85
>gi|114704485|ref|ZP_01437393.1| 50S ribosomal protein L4 [Fulvimarina pelagi HTCC2506]
gi|114539270|gb|EAU42390.1| 50S ribosomal protein L4 [Fulvimarina pelagi HTCC2506]
Length = 206
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 55/79 (69%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + D G + L+ +F + R+DI+HR+VR+QLAKRQQGTHST S+V+ TG K
Sbjct: 3 VTIKKLDGADAGTVTLSEAIFGLDPRQDILHRMVRYQLAKRQQGTHSTLGRSDVARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
+RQKGTGRARH T + PQ
Sbjct: 63 MYRQKGTGRARHSTAKAPQ 81
>gi|289424792|ref|ZP_06426574.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
SK187]
gi|289154755|gb|EFD03438.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
SK187]
Length = 301
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 56/85 (65%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V + + G L GD+FDV +IH+VV QLA +QGTH+TKT +V
Sbjct: 1 MNETKTIDVLDVKGKKAGSAELPGDLFDVNTNIPLIHQVVVAQLAAARQGTHATKTRGQV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
SG GKKPWRQKGTGRAR G+ R PQ
Sbjct: 61 SGGGKKPWRQKGTGRARQGSTRAPQ 85
>gi|422481184|ref|ZP_16557586.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL063PA1]
gi|313824893|gb|EFS62607.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL063PA1]
Length = 301
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 56/85 (65%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V + + G L GD+FDV +IH+VV QLA +QGTH+TKT +V
Sbjct: 1 MNETKTIDVLDVKGKKAGSAELPGDLFDVNTNIPLIHQVVVAQLAAARQGTHATKTRGQV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
SG GKKPWRQKGTGRAR G+ R PQ
Sbjct: 61 SGGGKKPWRQKGTGRARQGSTRAPQ 85
>gi|88608608|ref|YP_506158.1| 50S ribosomal protein L4 [Neorickettsia sennetsu str. Miyayama]
gi|109893610|sp|Q2GED8.1|RL4_NEOSM RecName: Full=50S ribosomal protein L4
gi|88600777|gb|ABD46245.1| ribosomal protein L4 [Neorickettsia sennetsu str. Miyayama]
Length = 214
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 52/76 (68%), Gaps = 6/76 (7%)
Query: 110 DKGFMVLAGDV------FDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWR 163
D G LAG V + P R D++ V+ WQLAKR+ GTH TK ISEVSGT +KP+R
Sbjct: 10 DFGASSLAGSVAVDRALIEAPFRPDLLSLVINWQLAKRRAGTHKTKGISEVSGTTRKPYR 69
Query: 164 QKGTGRARHGTLRGPQ 179
QKGTGRAR G+LR PQ
Sbjct: 70 QKGTGRARQGSLRAPQ 85
>gi|227821757|ref|YP_002825727.1| 50S ribosomal protein L4 [Sinorhizobium fredii NGR234]
gi|254803749|sp|C3MAY1.1|RL4_RHISN RecName: Full=50S ribosomal protein L4
gi|227340756|gb|ACP24974.1| 50S ribosomal protein L4 [Sinorhizobium fredii NGR234]
Length = 206
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V +D G + L+ +F + R+DII RVVRWQLAKRQQGTH K +EV+ TG K
Sbjct: 3 LTVKTLEGKDAGKVSLSDAIFGLEPREDIIARVVRWQLAKRQQGTHKAKGRAEVARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
++QKGTGRARH + R PQ + KA P +
Sbjct: 63 MYKQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|289427743|ref|ZP_06429455.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
J165]
gi|295131386|ref|YP_003582049.1| ribosomal protein, L4/L1 family [Propionibacterium acnes SK137]
gi|335052497|ref|ZP_08545383.1| 50S ribosomal protein L4 [Propionibacterium sp. 409-HC1]
gi|342211839|ref|ZP_08704564.1| 50S ribosomal protein L4 [Propionibacterium sp. CC003-HC2]
gi|354607577|ref|ZP_09025546.1| 50S ribosomal protein L4 [Propionibacterium sp. 5_U_42AFAA]
gi|365963507|ref|YP_004945073.1| ribosomal protein, L4/L1 family [Propionibacterium acnes TypeIA2
P.acn31]
gi|365965751|ref|YP_004947316.1| ribosomal protein, L4/L1 family [Propionibacterium acnes TypeIA2
P.acn17]
gi|365974686|ref|YP_004956245.1| ribosomal protein, L4/L1 family [Propionibacterium acnes TypeIA2
P.acn33]
gi|386024799|ref|YP_005943104.1| 50S ribosomal protein L4 [Propionibacterium acnes 266]
gi|407936243|ref|YP_006851885.1| 50S ribosomal protein L4 [Propionibacterium acnes C1]
gi|417930104|ref|ZP_12573484.1| 50S ribosomal protein L4 [Propionibacterium acnes SK182]
gi|422386376|ref|ZP_16466496.1| 50S ribosomal protein L4 [Propionibacterium acnes HL096PA3]
gi|422388799|ref|ZP_16468899.1| 50S ribosomal protein L4 [Propionibacterium acnes HL096PA2]
gi|422392519|ref|ZP_16472588.1| 50S ribosomal protein L4 [Propionibacterium acnes HL099PA1]
gi|422425705|ref|ZP_16502635.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL043PA1]
gi|422428746|ref|ZP_16505656.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL087PA1]
gi|422429718|ref|ZP_16506614.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL072PA2]
gi|422433913|ref|ZP_16510777.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL059PA2]
gi|422436515|ref|ZP_16513364.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL083PA2]
gi|422438982|ref|ZP_16515819.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL092PA1]
gi|422443903|ref|ZP_16520700.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL002PA1]
gi|422444527|ref|ZP_16521311.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL027PA1]
gi|422448524|ref|ZP_16525251.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL036PA3]
gi|422453941|ref|ZP_16530622.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL087PA3]
gi|422461318|ref|ZP_16537948.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL038PA1]
gi|422475875|ref|ZP_16552319.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL056PA1]
gi|422478508|ref|ZP_16554929.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL007PA1]
gi|422483693|ref|ZP_16560081.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL036PA1]
gi|422484317|ref|ZP_16560695.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL043PA2]
gi|422486921|ref|ZP_16563264.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL013PA2]
gi|422490067|ref|ZP_16566388.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL020PA1]
gi|422493845|ref|ZP_16570142.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL086PA1]
gi|422496555|ref|ZP_16572839.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL025PA1]
gi|422497184|ref|ZP_16573459.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL002PA3]
gi|422500587|ref|ZP_16576842.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL063PA2]
gi|422503594|ref|ZP_16579832.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL027PA2]
gi|422505811|ref|ZP_16582040.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL036PA2]
gi|422508789|ref|ZP_16584948.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL046PA2]
gi|422510211|ref|ZP_16586359.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL059PA1]
gi|422512200|ref|ZP_16588335.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL087PA2]
gi|422517137|ref|ZP_16593242.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL110PA2]
gi|422517731|ref|ZP_16593822.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL074PA1]
gi|422522290|ref|ZP_16598316.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL045PA1]
gi|422525062|ref|ZP_16601070.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL053PA2]
gi|422526778|ref|ZP_16602771.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL083PA1]
gi|422529981|ref|ZP_16605946.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL053PA1]
gi|422531032|ref|ZP_16606981.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL110PA1]
gi|422532943|ref|ZP_16608885.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL072PA1]
gi|422538119|ref|ZP_16613998.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL078PA1]
gi|422540702|ref|ZP_16616567.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL013PA1]
gi|422540764|ref|ZP_16616626.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL037PA1]
gi|422544806|ref|ZP_16620641.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL082PA1]
gi|422548442|ref|ZP_16624257.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL050PA3]
gi|422550135|ref|ZP_16625934.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL050PA1]
gi|422553277|ref|ZP_16629063.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL005PA3]
gi|422555941|ref|ZP_16631702.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL005PA2]
gi|422557849|ref|ZP_16633590.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL025PA2]
gi|422559813|ref|ZP_16635528.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL005PA1]
gi|422563744|ref|ZP_16639419.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL046PA1]
gi|422568168|ref|ZP_16643792.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL002PA2]
gi|422571652|ref|ZP_16647234.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL067PA1]
gi|422579624|ref|ZP_16655143.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL005PA4]
gi|289159234|gb|EFD07426.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
J165]
gi|291376076|gb|ADD99930.1| ribosomal protein, L4/L1 family [Propionibacterium acnes SK137]
gi|313763237|gb|EFS34601.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL013PA1]
gi|313773096|gb|EFS39062.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL074PA1]
gi|313793259|gb|EFS41317.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL110PA1]
gi|313801097|gb|EFS42365.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL110PA2]
gi|313808838|gb|EFS47292.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL087PA2]
gi|313810368|gb|EFS48082.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL083PA1]
gi|313812296|gb|EFS50010.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL025PA1]
gi|313816573|gb|EFS54287.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL059PA1]
gi|313818018|gb|EFS55732.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL046PA2]
gi|313819931|gb|EFS57645.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL036PA1]
gi|313823421|gb|EFS61135.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL036PA2]
gi|313828365|gb|EFS66079.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL063PA2]
gi|313830135|gb|EFS67849.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL007PA1]
gi|313832594|gb|EFS70308.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL056PA1]
gi|313837950|gb|EFS75664.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL086PA1]
gi|314914333|gb|EFS78164.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL005PA4]
gi|314917653|gb|EFS81484.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL050PA1]
gi|314919615|gb|EFS83446.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL050PA3]
gi|314925787|gb|EFS89618.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL036PA3]
gi|314930206|gb|EFS94037.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL067PA1]
gi|314957187|gb|EFT01291.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL027PA1]
gi|314957763|gb|EFT01866.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL002PA1]
gi|314960867|gb|EFT04968.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL002PA2]
gi|314963541|gb|EFT07641.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL082PA1]
gi|314969876|gb|EFT13974.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL037PA1]
gi|314973016|gb|EFT17112.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL053PA1]
gi|314975512|gb|EFT19607.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL045PA1]
gi|314979746|gb|EFT23840.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL072PA2]
gi|314984888|gb|EFT28980.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL005PA1]
gi|314986054|gb|EFT30146.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL005PA2]
gi|314988670|gb|EFT32761.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL005PA3]
gi|315077164|gb|EFT49231.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL053PA2]
gi|315079849|gb|EFT51825.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL078PA1]
gi|315083217|gb|EFT55193.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL027PA2]
gi|315086829|gb|EFT58805.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL002PA3]
gi|315089922|gb|EFT61898.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL072PA1]
gi|315096756|gb|EFT68732.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL038PA1]
gi|315097984|gb|EFT69960.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL059PA2]
gi|315100627|gb|EFT72603.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL046PA1]
gi|327325170|gb|EGE66976.1| 50S ribosomal protein L4 [Propionibacterium acnes HL096PA3]
gi|327325200|gb|EGE67005.1| 50S ribosomal protein L4 [Propionibacterium acnes HL096PA2]
gi|327444001|gb|EGE90655.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL043PA1]
gi|327449371|gb|EGE96025.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL013PA2]
gi|327449401|gb|EGE96055.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL043PA2]
gi|327451422|gb|EGE98076.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL087PA3]
gi|327451603|gb|EGE98257.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL092PA1]
gi|327451890|gb|EGE98544.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL083PA2]
gi|328752104|gb|EGF65720.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL087PA1]
gi|328755500|gb|EGF69116.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL025PA2]
gi|328756284|gb|EGF69900.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL020PA1]
gi|328761382|gb|EGF74909.1| 50S ribosomal protein L4 [Propionibacterium acnes HL099PA1]
gi|332676257|gb|AEE73073.1| 50S ribosomal protein L4 [Propionibacterium acnes 266]
gi|333763814|gb|EGL41239.1| 50S ribosomal protein L4 [Propionibacterium sp. 409-HC1]
gi|340767383|gb|EGR89908.1| 50S ribosomal protein L4 [Propionibacterium sp. CC003-HC2]
gi|340772791|gb|EGR95292.1| 50S ribosomal protein L4 [Propionibacterium acnes SK182]
gi|353556596|gb|EHC25966.1| 50S ribosomal protein L4 [Propionibacterium sp. 5_U_42AFAA]
gi|365740188|gb|AEW84390.1| ribosomal protein, L4/L1 family [Propionibacterium acnes TypeIA2
P.acn31]
gi|365742432|gb|AEW82126.1| ribosomal protein, L4/L1 family [Propionibacterium acnes TypeIA2
P.acn17]
gi|365744685|gb|AEW79882.1| ribosomal protein, L4/L1 family [Propionibacterium acnes TypeIA2
P.acn33]
gi|407904824|gb|AFU41654.1| 50S ribosomal protein L4 [Propionibacterium acnes C1]
gi|456738948|gb|EMF63515.1| 50S ribosomal protein L4 [Propionibacterium acnes FZ1/2/0]
Length = 301
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 56/85 (65%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V + + G L GD+FDV +IH+VV QLA +QGTH+TKT +V
Sbjct: 1 MNETKTIDVLDVKGKKAGSAELPGDLFDVNTNIPLIHQVVVAQLAAARQGTHATKTRGQV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
SG GKKPWRQKGTGRAR G+ R PQ
Sbjct: 61 SGGGKKPWRQKGTGRARQGSTRAPQ 85
>gi|422451192|ref|ZP_16527896.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL030PA2]
gi|315109231|gb|EFT81207.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL030PA2]
Length = 301
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 56/85 (65%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V + + G L GD+FDV +IH+VV QLA +QGTH+TKT +V
Sbjct: 1 MNETKTIDVLDVKGKKAGSAELPGDLFDVNTNIPLIHQVVVAQLAAARQGTHATKTRGQV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
SG GKKPWRQKGTGRAR G+ R PQ
Sbjct: 61 SGGGKKPWRQKGTGRARQGSTRAPQ 85
>gi|414342981|ref|YP_006984502.1| protein RplD [Gluconobacter oxydans H24]
gi|411028316|gb|AFW01571.1| RplD [Gluconobacter oxydans H24]
gi|453330316|dbj|GAC87544.1| 50S ribosomal protein L4 [Gluconobacter thailandicus NBRC 3255]
Length = 204
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 52/77 (67%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N G + L ++F V R DI+ RVV WQLAKR+ GTH TK + E+SGT KKP+
Sbjct: 5 IKTLDNGSAGSVALPEEIFAVSPRADIMARVVHWQLAKRRAGTHRTKGMGEISGTTKKPF 64
Query: 163 RQKGTGRARHGTLRGPQ 179
RQKGTG AR G+LR PQ
Sbjct: 65 RQKGTGSARQGSLRAPQ 81
>gi|50843317|ref|YP_056544.1| 50S ribosomal protein L4 [Propionibacterium acnes KPA171202]
gi|335053586|ref|ZP_08546422.1| 50S ribosomal protein L4 [Propionibacterium sp. 434-HC2]
gi|387504227|ref|YP_005945456.1| 50S ribosomal protein L4 [Propionibacterium acnes 6609]
gi|422456901|ref|ZP_16533564.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL030PA1]
gi|81611203|sp|Q6A6M7.1|RL4_PROAC RecName: Full=50S ribosomal protein L4
gi|50840919|gb|AAT83586.1| 50S ribosomal protein L4 [Propionibacterium acnes KPA171202]
gi|315106072|gb|EFT78048.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL030PA1]
gi|333766847|gb|EGL44129.1| 50S ribosomal protein L4 [Propionibacterium sp. 434-HC2]
gi|335278272|gb|AEH30177.1| 50S ribosomal protein L4 [Propionibacterium acnes 6609]
Length = 301
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 56/85 (65%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V + + G L GD+FDV +IH+VV QLA +QGTH+TKT +V
Sbjct: 1 MNETKTIDVLDVKGKKAGSAELPGDLFDVNTNIPLIHQVVVAQLAAARQGTHATKTRGQV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
SG GKKPWRQKGTGRAR G+ R PQ
Sbjct: 61 SGGGKKPWRQKGTGRARQGSTRAPQ 85
>gi|422391174|ref|ZP_16471267.1| 50S ribosomal protein L4 [Propionibacterium acnes HL103PA1]
gi|422458947|ref|ZP_16535596.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL050PA2]
gi|422464169|ref|ZP_16540780.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL060PA1]
gi|422566402|ref|ZP_16642036.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL082PA2]
gi|422575121|ref|ZP_16650665.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL001PA1]
gi|314924184|gb|EFS88015.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL001PA1]
gi|314965094|gb|EFT09193.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL082PA2]
gi|315093674|gb|EFT65650.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL060PA1]
gi|315103968|gb|EFT75944.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL050PA2]
gi|327326711|gb|EGE68497.1| 50S ribosomal protein L4 [Propionibacterium acnes HL103PA1]
Length = 301
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 56/85 (65%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V + + G L GD+FDV +IH+VV QLA +QGTH+TKT +V
Sbjct: 1 MNETKTIDVLDVKGKKAGSAELPGDLFDVNTNIPLIHQVVVAQLAAARQGTHATKTRGQV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
SG GKKPWRQKGTGRAR G+ R PQ
Sbjct: 61 SGGGKKPWRQKGTGRARQGSTRAPQ 85
>gi|86739296|ref|YP_479696.1| 50S ribosomal protein L4 [Frankia sp. CcI3]
gi|109893595|sp|Q2JFH5.1|RL4_FRASC RecName: Full=50S ribosomal protein L4
gi|86566158|gb|ABD09967.1| LSU ribosomal protein L4P [Frankia sp. CcI3]
Length = 245
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 51/70 (72%)
Query: 110 DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGR 169
+ G + L G VFDVP+ +IH+VV QLA +QGTH TKT EV G G+KP+RQKGTGR
Sbjct: 25 EGGSVELPGGVFDVPLNIPLIHQVVVAQLAAARQGTHDTKTRGEVRGGGRKPYRQKGTGR 84
Query: 170 ARHGTLRGPQ 179
AR G+LR PQ
Sbjct: 85 ARQGSLRAPQ 94
>gi|282855207|ref|ZP_06264539.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
J139]
gi|386070059|ref|YP_005984955.1| ribosomal protein, L4/L1 family [Propionibacterium acnes ATCC
11828]
gi|422467511|ref|ZP_16544063.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL110PA4]
gi|422468957|ref|ZP_16545487.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL110PA3]
gi|282581795|gb|EFB87180.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
J139]
gi|314982252|gb|EFT26345.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL110PA3]
gi|315090439|gb|EFT62415.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL110PA4]
gi|353454426|gb|AER04945.1| ribosomal protein, L4/L1 family [Propionibacterium acnes ATCC
11828]
Length = 301
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 56/85 (65%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V + + G L GD+FDV +IH+VV QLA +QGTH+TKT +V
Sbjct: 1 MNETKTIDVLDVKGKKAGSAELPGDLFDVNTNIPLIHQVVVAQLAAARQGTHATKTRGQV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
SG GKKPWRQKGTGRAR G+ R PQ
Sbjct: 61 SGGGKKPWRQKGTGRARQGSTRAPQ 85
>gi|339018300|ref|ZP_08644438.1| LSU ribosomal protein L4P [Acetobacter tropicalis NBRC 101654]
gi|338752577|dbj|GAA07742.1| LSU ribosomal protein L4P [Acetobacter tropicalis NBRC 101654]
Length = 204
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + N G L ++F V R DI+ RVV WQLAKR+ GTH K +++VSGT KK
Sbjct: 3 IEIKTLDNGTAGSATLPDELFAVAPRADIMARVVHWQLAKRRAGTHQVKGMADVSGTTKK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTG AR G+LR PQ
Sbjct: 63 PYRQKGTGSARQGSLRAPQ 81
>gi|410943569|ref|ZP_11375310.1| 50S ribosomal protein L4 [Gluconobacter frateurii NBRC 101659]
Length = 204
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 52/77 (67%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N G + L ++F V R DI+ RVV WQLAKR+ GTH TK + E+SGT KKP+
Sbjct: 5 IKTLDNGSAGSVALPEEIFAVSPRADIMARVVHWQLAKRRAGTHRTKGMGEISGTTKKPF 64
Query: 163 RQKGTGRARHGTLRGPQ 179
RQKGTG AR G+LR PQ
Sbjct: 65 RQKGTGSARQGSLRAPQ 81
>gi|159477929|ref|XP_001697061.1| mitochondrial ribosomal protein L4 [Chlamydomonas reinhardtii]
gi|158274973|gb|EDP00753.1| mitochondrial ribosomal protein L4 [Chlamydomonas reinhardtii]
Length = 124
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G L G F+VP+R DI+HRVVR+ AK QQGTH K+ +EVSG GKKPW QK TGRAR
Sbjct: 10 GLAPLPGAAFNVPVRIDILHRVVRYWRAKWQQGTHKAKSRAEVSGGGKKPWNQKKTGRAR 69
Query: 172 HGTLRGPQGWYYNARSKAQKP 192
G++R P W S A +P
Sbjct: 70 QGSIRSPL-WKGGGVSHAPRP 89
>gi|384136730|ref|YP_005519444.1| 50S ribosomal protein L4 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339290815|gb|AEJ44925.1| ribosomal protein L4/L1e [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 203
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 54/79 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + L +F PIR D++H VV LA R++GTH TKT +EVSG G+K
Sbjct: 1 MAVLNTAGQQVGEIELNEKIFGAPIRPDLMHIVVLQYLAARRRGTHKTKTRAEVSGGGRK 60
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G++R PQ
Sbjct: 61 PWRQKGTGRARQGSIRAPQ 79
>gi|417933024|ref|ZP_12576358.1| 50S ribosomal protein L4 [Propionibacterium acnes SK182B-JCVI]
gi|340772943|gb|EGR95438.1| 50S ribosomal protein L4 [Propionibacterium acnes SK182B-JCVI]
Length = 301
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 55/85 (64%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V + + G L GDVFD +IH+VV QLA +QGTH+TKT +V
Sbjct: 1 MNETKTIDVLDVKGKKAGSAELPGDVFDANTNIPLIHQVVIAQLAAARQGTHATKTRGQV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
SG GKKPWRQKGTGRAR G+ R PQ
Sbjct: 61 SGGGKKPWRQKGTGRARQGSTRAPQ 85
>gi|333918148|ref|YP_004491729.1| 50S ribosomal protein L4 [Amycolicicoccus subflavus DQS3-9A1]
gi|333480369|gb|AEF38929.1| 50S ribosomal protein L4 [Amycolicicoccus subflavus DQS3-9A1]
Length = 232
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 51/69 (73%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
G + L ++FD P+ ++H+VV QLA +QGTHSTKT +EVSG GKKP+RQKGTGRA
Sbjct: 25 NGTVDLPAEIFDAPVNVALMHQVVVAQLAAARQGTHSTKTRAEVSGGGKKPYRQKGTGRA 84
Query: 171 RHGTLRGPQ 179
R G+ R PQ
Sbjct: 85 RQGSTRAPQ 93
>gi|430003421|emb|CCF19208.1| 50S ribosomal subunit protein L4 [Rhizobium sp.]
Length = 206
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ ++F + R+DI+ R+VRWQLAK+QQGTH K SEVS TG K +
Sbjct: 5 VKTLEGKDAGKVSLSDEIFGLDPREDILARMVRWQLAKKQQGTHKIKNRSEVSRTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
+QKGTGRARH + R PQ + KA P +
Sbjct: 65 KQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|357032625|ref|ZP_09094560.1| 50S ribosomal protein L4 [Gluconobacter morbifer G707]
gi|356413616|gb|EHH67268.1| 50S ribosomal protein L4 [Gluconobacter morbifer G707]
Length = 204
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 52/77 (67%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N G + L ++F V R D++ RVV WQLAKR+ GTH TK + E+SGT KKP+
Sbjct: 5 IKTLDNGSAGTVALPEEIFAVSPRADLMARVVHWQLAKRRAGTHRTKGMGEISGTTKKPY 64
Query: 163 RQKGTGRARHGTLRGPQ 179
RQKGTG AR G+LR PQ
Sbjct: 65 RQKGTGSARQGSLRAPQ 81
>gi|271962633|ref|YP_003336829.1| 50S ribosomal protein L4 [Streptosporangium roseum DSM 43021]
gi|270505808|gb|ACZ84086.1| 50S ribosomal protein L4 [Streptosporangium roseum DSM 43021]
Length = 215
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V + G + L GD+FD + +IH+VV QLA R+QGTH KT EVSG GKK
Sbjct: 4 IDVLDVSGAKTGTVDLPGDIFDAKVNIPLIHQVVVAQLAARRQGTHKAKTRGEVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G+ R PQ
Sbjct: 64 PYRQKGTGRARQGSTRAPQ 82
>gi|402703209|ref|ZP_10851188.1| 50S ribosomal protein L4 [Rickettsia helvetica C9P9]
Length = 207
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + NE+ G + L+ D+F V IR DII RV+ WQ AK G H TKT+SEVSGT KKP
Sbjct: 5 ILSLANEEVGEISLSEDIFAVEFIRDDIIKRVIDWQRAKAMSGNHKTKTVSEVSGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQ 179
++QKGTG AR G+LR Q
Sbjct: 65 FKQKGTGNARQGSLRSVQ 82
>gi|378825668|ref|YP_005188400.1| 50S ribosomal protein L4 BL4 [Sinorhizobium fredii HH103]
gi|365178720|emb|CCE95575.1| 50S ribosomal protein L4 BL4 [Sinorhizobium fredii HH103]
Length = 206
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V +D G + L+ +F + R+DII RV+RWQLAKRQQGTH K +EV+ TG K
Sbjct: 3 LTVKTLEGKDAGKVSLSDAIFGLEPREDIIARVIRWQLAKRQQGTHKAKGRAEVARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
++QKGTGRARH + R PQ + KA P +
Sbjct: 63 MYKQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|427391364|ref|ZP_18885770.1| 50S ribosomal protein L4 [Actinobaculum massiliae ACS-171-V-Col2]
gi|425732007|gb|EKU94819.1| 50S ribosomal protein L4 [Actinobaculum massiliae ACS-171-V-Col2]
Length = 215
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 54/82 (65%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
D I V +F + G L ++FDV + ++H+VV QLA +QGTH TKT EV G
Sbjct: 3 DKKIDVLDFSGKAAGTATLPAELFDVEVNVSLLHQVVNAQLAAARQGTHKTKTRGEVRGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
GKKP+RQKGTGRAR G++R PQ
Sbjct: 63 GKKPFRQKGTGRARQGSIRAPQ 84
>gi|88606786|ref|YP_504893.1| 50S ribosomal protein L4 [Anaplasma phagocytophilum HZ]
gi|109893574|sp|Q2GL58.1|RL4_ANAPZ RecName: Full=50S ribosomal protein L4
gi|88597849|gb|ABD43319.1| ribosomal protein L4 [Anaplasma phagocytophilum HZ]
Length = 208
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 53/79 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N NE G + L VF + R+D++ VV WQLAKR+ GTH K IS++SGT K
Sbjct: 3 VNIVNIANEVVGSIDLNPQVFGLEPRRDVLKEVVNWQLAKRRAGTHKAKGISDISGTTAK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQK TGRAR G+LR PQ
Sbjct: 63 PYRQKHTGRARQGSLRSPQ 81
>gi|125975385|ref|YP_001039295.1| 50S ribosomal protein L4 [Clostridium thermocellum ATCC 27405]
gi|256005328|ref|ZP_05430294.1| ribosomal protein L4/L1e [Clostridium thermocellum DSM 2360]
gi|281419347|ref|ZP_06250362.1| ribosomal protein L4/L1e [Clostridium thermocellum JW20]
gi|385777821|ref|YP_005686986.1| 50S ribosomal protein L4 [Clostridium thermocellum DSM 1313]
gi|419723227|ref|ZP_14250360.1| ribosomal protein L4/L1e [Clostridium thermocellum AD2]
gi|419727128|ref|ZP_14254134.1| ribosomal protein L4/L1e [Clostridium thermocellum YS]
gi|166234659|sp|A3DJH3.1|RL4_CLOTH RecName: Full=50S ribosomal protein L4
gi|125715610|gb|ABN54102.1| ribosomal protein L4/L1e [Clostridium thermocellum ATCC 27405]
gi|255990764|gb|EEU00880.1| ribosomal protein L4/L1e [Clostridium thermocellum DSM 2360]
gi|281406967|gb|EFB37230.1| ribosomal protein L4/L1e [Clostridium thermocellum JW20]
gi|316939501|gb|ADU73535.1| ribosomal protein L4/L1e [Clostridium thermocellum DSM 1313]
gi|380769533|gb|EIC03447.1| ribosomal protein L4/L1e [Clostridium thermocellum YS]
gi|380780692|gb|EIC10357.1| ribosomal protein L4/L1e [Clostridium thermocellum AD2]
Length = 208
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 50/68 (73%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L D+F + + K IH+V+ QLA R+QGT STKT SEV G G+KPWRQKGTGRAR
Sbjct: 15 GEINLRDDIFGIEVNKHAIHQVIVNQLANRRQGTQSTKTKSEVRGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQ 179
HG++R Q
Sbjct: 75 HGSIRSAQ 82
>gi|374298075|ref|YP_005048266.1| 50S ribosomal protein L4 [Clostridium clariflavum DSM 19732]
gi|359827569|gb|AEV70342.1| LSU ribosomal protein L4P [Clostridium clariflavum DSM 19732]
Length = 207
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 52/68 (76%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ +VF V + K+++H+VV QLA ++QGT STKT SEV G G KPWRQKGTGRAR
Sbjct: 15 GDINLSDEVFGVEVNKEVVHQVVVNQLANKRQGTQSTKTKSEVRGGGIKPWRQKGTGRAR 74
Query: 172 HGTLRGPQ 179
HG++R Q
Sbjct: 75 HGSIRSAQ 82
>gi|317485821|ref|ZP_07944685.1| ribosomal protein L4/L1 family protein [Bilophila wadsworthia
3_1_6]
gi|345887472|ref|ZP_08838652.1| 50S ribosomal protein L4 [Bilophila sp. 4_1_30]
gi|316922927|gb|EFV44149.1| ribosomal protein L4/L1 family protein [Bilophila wadsworthia
3_1_6]
gi|345041781|gb|EGW45910.1| 50S ribosomal protein L4 [Bilophila sp. 4_1_30]
Length = 206
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 57/81 (70%), Gaps = 3/81 (3%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+ V +++DK G + L +VF+V +R +I+H VVR QLA ++ GTHSTKT + VSG
Sbjct: 1 MAVVKVYDQDKTEQGELTLTPEVFEVAVRPEILHLVVRAQLAAKRAGTHSTKTRAMVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGP 178
G KPWRQKGTGRAR G+ R P
Sbjct: 61 GVKPWRQKGTGRARAGSNRSP 81
>gi|418937871|ref|ZP_13491458.1| ribosomal protein L4/L1e [Rhizobium sp. PDO1-076]
gi|375055420|gb|EHS51681.1| ribosomal protein L4/L1e [Rhizobium sp. PDO1-076]
Length = 206
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V ++ G + L+ D+F + R+DII R++RWQLA ++QGTH TKT +EVS TG K +
Sbjct: 5 VKTLEGKEAGKVSLSDDIFGLDPREDIIARMIRWQLANKRQGTHKTKTRAEVSRTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
+QKGTGRARH + R PQ + KA P +
Sbjct: 65 KQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|433775497|ref|YP_007305964.1| 50S ribosomal protein L4, bacterial/organelle [Mesorhizobium
australicum WSM2073]
gi|433667512|gb|AGB46588.1| 50S ribosomal protein L4, bacterial/organelle [Mesorhizobium
australicum WSM2073]
Length = 206
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L+ +F + R+DI+ RVVRWQLAK+QQGTH K +E++ TG K
Sbjct: 3 LKITTLGGKDAGKVELSDGIFGLDPREDILQRVVRWQLAKKQQGTHKAKGRAEIARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
++QKGTGRARH + R PQ + KA P +
Sbjct: 63 MYKQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|218460209|ref|ZP_03500300.1| 50S ribosomal protein L4 [Rhizobium etli Kim 5]
Length = 206
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V +D G + L+ ++F + R+DI+ RV+RWQLAK+QQGTH K +EVS TG
Sbjct: 1 MELNVKTLEGKDAGKVSLSDEIFGLEPREDILARVIRWQLAKKQQGTHKAKGRAEVSRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
K ++QKGTGRARH + R PQ + KA P +
Sbjct: 61 AKMYKQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|220928208|ref|YP_002505117.1| 50S ribosomal protein L4 [Clostridium cellulolyticum H10]
gi|254803726|sp|B8I7Y0.1|RL4_CLOCE RecName: Full=50S ribosomal protein L4
gi|219998536|gb|ACL75137.1| ribosomal protein L4/L1e [Clostridium cellulolyticum H10]
Length = 207
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + +N E G + L+ +VF + KD +H VV QLA R+QGT STKT SEV G
Sbjct: 1 MPKVDLYNMKGEVVGDIQLSDNVFGTDVNKDALHAVVVNQLANRRQGTQSTKTKSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
GKKPWRQKGTGRAR G++R Q
Sbjct: 61 GKKPWRQKGTGRARQGSIRSAQ 82
>gi|86357306|ref|YP_469198.1| 50S ribosomal protein L4 [Rhizobium etli CFN 42]
gi|417103119|ref|ZP_11960977.1| 50S ribosomal protein L4 [Rhizobium etli CNPAF512]
gi|109893627|sp|Q2K9L5.1|RL4_RHIEC RecName: Full=50S ribosomal protein L4
gi|86281408|gb|ABC90471.1| 50S ribosomal protein L4 [Rhizobium etli CFN 42]
gi|327191387|gb|EGE58413.1| 50S ribosomal protein L4 [Rhizobium etli CNPAF512]
Length = 206
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V +D G + L+ ++F + R+DI+ RV+RWQLAK+QQGTH K +EVS TG
Sbjct: 1 MELNVKTLEGKDAGKVSLSDEIFGLEPREDILARVIRWQLAKKQQGTHKAKGRAEVSRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
K ++QKGTGRARH + R PQ + KA P +
Sbjct: 61 AKMYKQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|218672011|ref|ZP_03521680.1| 50S ribosomal protein L4 [Rhizobium etli GR56]
Length = 206
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V +D G + L+ ++F + R+DI+ RV+RWQLAK+QQGTH K +EVS TG
Sbjct: 1 MELNVKTLEGKDAGKVSLSDEIFGLEPREDILARVIRWQLAKKQQGTHKAKGRAEVSRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
K ++QKGTGRARH + R PQ + KA P +
Sbjct: 61 AKMYKQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|332982708|ref|YP_004464149.1| 50S ribosomal protein L4P [Mahella australiensis 50-1 BON]
gi|332700386|gb|AEE97327.1| LSU ribosomal protein L4P [Mahella australiensis 50-1 BON]
Length = 207
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+PV N + G + L ++F + + + +H+VV+ QLA ++QGT S KT EV G G+K
Sbjct: 4 VPVYNIEGQQVGEIELKDEIFGIEVNEAALHQVVQMQLANKRQGTQSAKTRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PWRQKGTGRAR G++R PQ W A KP
Sbjct: 64 PWRQKGTGRARQGSIRAPQ-WIKGGVVFAPKP 94
>gi|402486083|ref|ZP_10832915.1| 50S ribosomal protein L4 [Rhizobium sp. CCGE 510]
gi|401814739|gb|EJT07069.1| 50S ribosomal protein L4 [Rhizobium sp. CCGE 510]
Length = 206
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ +F + R+DII RVVRWQLAK+QQGTH K +EVS TG K +
Sbjct: 5 VKTLEGKDAGKVSLSDAIFGLEPREDIIARVVRWQLAKKQQGTHKAKGRAEVSRTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
+QKGTGRARH + R PQ + KA P +
Sbjct: 65 KQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|227876214|ref|ZP_03994330.1| ribosomal protein L4 [Mobiluncus mulieris ATCC 35243]
gi|269976880|ref|ZP_06183854.1| ribosomal protein L4/L1 family [Mobiluncus mulieris 28-1]
gi|306819490|ref|ZP_07453197.1| ribosomal protein L4/L1 family protein [Mobiluncus mulieris ATCC
35239]
gi|307701215|ref|ZP_07638237.1| 50S ribosomal protein L4 [Mobiluncus mulieris FB024-16]
gi|227843175|gb|EEJ53368.1| ribosomal protein L4 [Mobiluncus mulieris ATCC 35243]
gi|269934711|gb|EEZ91271.1| ribosomal protein L4/L1 family [Mobiluncus mulieris 28-1]
gi|304647782|gb|EFM45100.1| ribosomal protein L4/L1 family protein [Mobiluncus mulieris ATCC
35239]
gi|307613609|gb|EFN92856.1| 50S ribosomal protein L4 [Mobiluncus mulieris FB024-16]
Length = 214
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V + + G + L G+VFD+ + ++H+VV QLA +QGTH+TKT +VSG GKK
Sbjct: 7 IDVLDGAGKKTGTVELPGEVFDLELNVPLLHQVVNAQLAAARQGTHATKTRGDVSGGGKK 66
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G++R PQ
Sbjct: 67 PYRQKGTGRARQGSIRAPQ 85
>gi|354593427|ref|ZP_09011470.1| 50S ribosomal protein L4 [Commensalibacter intestini A911]
gi|353672538|gb|EHD14234.1| 50S ribosomal protein L4 [Commensalibacter intestini A911]
Length = 204
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N G + L ++F+V R DI+ RVV WQLAKR+ GTH K EVSGT KK
Sbjct: 3 VEIKTLDNGSVGNITLPAELFEVQPRADIMARVVHWQLAKRRAGTHKVKGRGEVSGTTKK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTG AR G+LRGP
Sbjct: 63 PFRQKGTGNARQGSLRGPH 81
>gi|399889063|ref|ZP_10774940.1| 50S ribosomal protein L4 [Clostridium arbusti SL206]
Length = 206
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G + L+ ++F + D +H+VV QLA ++QG S KT SEVSG
Sbjct: 1 MPTVGLFNQEGKKVGDIELSTNIFGAEVNTDALHQVVVAQLANKRQGNQSAKTRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
G KPWRQKGTGRAR G++R PQ W + A KP
Sbjct: 61 GIKPWRQKGTGRARQGSIRSPQ-WIHGGIVFAPKP 94
>gi|395782719|ref|ZP_10463091.1| 50S ribosomal protein L4 [Bartonella rattimassiliensis 15908]
gi|395416597|gb|EJF82967.1| 50S ribosomal protein L4 [Bartonella rattimassiliensis 15908]
Length = 206
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + + G + ++ +FD+ R+DI+ RVVRWQLA+RQQG+H ++ S+VS T
Sbjct: 2 DLVI--KTLYGNEAGKLKVSEAIFDLVPREDILQRVVRWQLARRQQGSHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
G K ++QKGTGRARH + R PQ + KA P +
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQ---FRGGGKAHGPVVR 94
>gi|39938687|ref|NP_950453.1| ribosomal protein L4 [Onion yellows phytoplasma OY-M]
gi|46577157|sp|P61067.1|RL4_ONYPE RecName: Full=50S ribosomal protein L4
gi|39721796|dbj|BAD04286.1| ribosomal protein L4 [Onion yellows phytoplasma OY-M]
Length = 207
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Query: 101 IPVTNFFNEDKGFM---VLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P N N+ F+ VLA VFD+ + +++ VV Q A +QGTH+TKT + V+G
Sbjct: 1 MPKINILNQQGDFVSEKVLATTVFDIKPNQQVLYDVVNAQRAAMRQGTHATKTRALVAGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGP 178
GKKPWRQKGTGRARHG++R P
Sbjct: 61 GKKPWRQKGTGRARHGSIRSP 81
>gi|330470172|ref|YP_004407915.1| 50S ribosomal protein L4 [Verrucosispora maris AB-18-032]
gi|328813143|gb|AEB47315.1| 50S ribosomal protein L4 [Verrucosispora maris AB-18-032]
Length = 216
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 53/79 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L GD+FDV ++H+VV QLA +QGTH TKT EVSG GKK
Sbjct: 4 VDVLNSEGTKTGSVELPGDIFDVQANVPLMHQVVVAQLAAARQGTHKTKTRGEVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P++QKGTGRAR G++R PQ
Sbjct: 64 PYKQKGTGRARQGSIRAPQ 82
>gi|297588192|ref|ZP_06946836.1| ribosomal protein L4/L1 family protein [Finegoldia magna ATCC
53516]
gi|297574881|gb|EFH93601.1| ribosomal protein L4/L1 family protein [Finegoldia magna ATCC
53516]
Length = 207
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 54/79 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E+ G + L +F V + + +++ VVR QLA ++QGT S KT SEV G GKK
Sbjct: 4 VQILNQQGENVGELELNEAIFGVDVNEHVVYEVVRNQLANKRQGTQSAKTRSEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G++R PQ
Sbjct: 64 PWRQKGTGRARQGSIRSPQ 82
>gi|347760287|ref|YP_004867848.1| 50S ribosomal protein L4 [Gluconacetobacter xylinus NBRC 3288]
gi|347579257|dbj|BAK83478.1| LSU ribosomal protein L4P [Gluconacetobacter xylinus NBRC 3288]
Length = 204
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 50/77 (64%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N G L ++F V R DI+ RVV WQLAKR+ GTH K + E+SGT KKP+
Sbjct: 5 IKTLDNGSAGTASLPDEIFAVTPRNDIMARVVHWQLAKRRAGTHKVKGMGEISGTTKKPY 64
Query: 163 RQKGTGRARHGTLRGPQ 179
RQKGTG AR G+LR PQ
Sbjct: 65 RQKGTGSARQGSLRSPQ 81
>gi|269219005|ref|ZP_06162859.1| ribosomal protein L4/L1 family protein [Actinomyces sp. oral taxon
848 str. F0332]
gi|269212116|gb|EEZ78456.1| ribosomal protein L4/L1 family protein [Actinomyces sp. oral taxon
848 str. F0332]
Length = 215
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 56/85 (65%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ Q L V + + G L ++FDV + +IH+VV QLA +QGTHSTKT EV
Sbjct: 1 MTQSLNADVYDVTGKVTGSFELPAELFDVEVNIPLIHQVVNAQLAAARQGTHSTKTRGEV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
SG GKKP++QKGTGRAR G++R PQ
Sbjct: 61 SGGGKKPFKQKGTGRARQGSIRAPQ 85
>gi|51473838|ref|YP_067595.1| 50S ribosomal protein L4 [Rickettsia typhi str. Wilmington]
gi|383752614|ref|YP_005427714.1| 50S ribosomal protein L4 [Rickettsia typhi str. TH1527]
gi|383843450|ref|YP_005423953.1| 50S ribosomal protein L4 [Rickettsia typhi str. B9991CWPP]
gi|81610771|sp|Q68W79.1|RL4_RICTY RecName: Full=50S ribosomal protein L4
gi|51460150|gb|AAU04113.1| 50S ribosomal protein L4 [Rickettsia typhi str. Wilmington]
gi|380759257|gb|AFE54492.1| 50S ribosomal protein L4 [Rickettsia typhi str. TH1527]
gi|380760097|gb|AFE55331.1| 50S ribosomal protein L4 [Rickettsia typhi str. B9991CWPP]
Length = 207
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEVSGT KKP
Sbjct: 5 ILSLANEEVGEITLNKDIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVSGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQ----GWYY--NARSKAQKPCYKVEQEGAA-AWVEDCS 209
++QKGTG AR G+LR Q G + RS A K KV + G A E C+
Sbjct: 65 FKQKGTGNARQGSLRSIQMRGGGISHGPKVRSHAIKLPKKVRKLGLIHALSEKCA 119
>gi|395786491|ref|ZP_10466218.1| 50S ribosomal protein L4 [Bartonella tamiae Th239]
gi|423716616|ref|ZP_17690806.1| 50S ribosomal protein L4 [Bartonella tamiae Th307]
gi|395422789|gb|EJF88985.1| 50S ribosomal protein L4 [Bartonella tamiae Th239]
gi|395428690|gb|EJF94765.1| 50S ribosomal protein L4 [Bartonella tamiae Th307]
Length = 206
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + ++ G + L+ VF + R+DI+ RVVRWQLA+RQQGTH T++ ++VS TG K
Sbjct: 3 LNIMTLEGKETGKVTLSDAVFGLDPREDILQRVVRWQLARRQQGTHQTQSRADVSRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
++QKGTGRARH + R PQ + KA P +
Sbjct: 63 MYKQKGTGRARHSSARAPQ---FRGGGKAHGPVAR 94
>gi|281206127|gb|EFA80316.1| hypothetical protein PPL_07147 [Polysphondylium pallidum PN500]
Length = 318
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 101 IPVTNFFN-EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
+PV NF + E+ G + L +F VP+R DI+HR+VRWQ AK QGTH + + ++ T K
Sbjct: 111 VPVVNFKSKENVGEIQLLKSIFSVPLRVDILHRIVRWQRAKAMQGTHYAQNMGDIDRTNK 170
Query: 160 KPWRQKGTGRARHGT 174
KP+ QKGTGRAR GT
Sbjct: 171 KPFSQKGTGRARQGT 185
>gi|399525030|ref|ZP_10765509.1| 50S ribosomal protein L4 [Atopobium sp. ICM58]
gi|398373562|gb|EJN51478.1| 50S ribosomal protein L4 [Atopobium sp. ICM58]
Length = 216
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 56/85 (65%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ D + V + + G +VL G +FDVP ++H+VV QLA +QGTH+TKT EV
Sbjct: 3 MADDRNVDVIDLEGKKAGSVVLPGSIFDVPTNIPLMHQVVVAQLAAARQGTHATKTRGEV 62
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
+G GKKP+RQKGTG AR G++R P
Sbjct: 63 AGGGKKPFRQKGTGNARQGSIRAPH 87
>gi|337286817|ref|YP_004626290.1| 50S ribosomal protein L4/L1e [Thermodesulfatator indicus DSM 15286]
gi|335359645|gb|AEH45326.1| ribosomal protein L4/L1e [Thermodesulfatator indicus DSM 15286]
Length = 207
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 54/79 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E + L D+F+VP++ ++H+VVRWQ+A+ + GT TKT EV G G+K
Sbjct: 4 VAVVNNKKEKVDEVNLREDIFNVPVKVGLLHQVVRWQMARWRAGTACTKTRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G++R P
Sbjct: 64 PWRQKGTGRARQGSIRAPH 82
>gi|357039748|ref|ZP_09101540.1| ribosomal protein L4/L1e [Desulfotomaculum gibsoniae DSM 7213]
gi|355357554|gb|EHG05327.1| ribosomal protein L4/L1e [Desulfotomaculum gibsoniae DSM 7213]
Length = 207
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N + G + L D+F + + + +H VV QLA R+QGTH TKT +EVSG G+K
Sbjct: 4 VAMYNINGDQVGEIDLKEDIFGIAVHQQALHDVVTMQLAGRRQGTHDTKTRAEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
P+RQKGTGRARHG++R P
Sbjct: 64 PYRQKGTGRARHGSIRSP 81
>gi|350567991|ref|ZP_08936397.1| 50S ribosomal protein L4 [Propionibacterium avidum ATCC 25577]
gi|348662243|gb|EGY78912.1| 50S ribosomal protein L4 [Propionibacterium avidum ATCC 25577]
Length = 301
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 54/85 (63%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V + + G L GDVFD +IH+VV QLA +QGTH+TKT V
Sbjct: 1 MNETKTIDVLDVKGKKAGSAELPGDVFDANTNIPLIHQVVIAQLAAARQGTHATKTRGLV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
SG GKKPWRQKGTGRAR G+ R PQ
Sbjct: 61 SGGGKKPWRQKGTGRARQGSTRAPQ 85
>gi|399528200|ref|ZP_10767854.1| 50S ribosomal protein L4 [Actinomyces sp. ICM39]
gi|398361252|gb|EJN45027.1| 50S ribosomal protein L4 [Actinomyces sp. ICM39]
Length = 214
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 56/85 (65%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ D + V + + G +VL G +FDVP ++H+VV QLA +QGTH+TKT EV
Sbjct: 1 MADDRNVDVIDLKGKKAGSVVLPGSIFDVPTNIPLMHQVVVAQLAAARQGTHATKTRGEV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
+G GKKP+RQKGTG AR G++R P
Sbjct: 61 AGGGKKPFRQKGTGNARQGSIRAPH 85
>gi|154507863|ref|ZP_02043505.1| hypothetical protein ACTODO_00345 [Actinomyces odontolyticus ATCC
17982]
gi|153797497|gb|EDN79917.1| 50S ribosomal protein L4 [Actinomyces odontolyticus ATCC 17982]
Length = 216
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 56/85 (65%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ D + V + + G +VL G +FDVP ++H+VV QLA +QGTH+TKT EV
Sbjct: 3 MADDRNVDVIDLKGKKAGSVVLPGSIFDVPTNIPLMHQVVVAQLAAARQGTHATKTRGEV 62
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
+G GKKP+RQKGTG AR G++R P
Sbjct: 63 AGGGKKPFRQKGTGNARQGSIRAPH 87
>gi|398829356|ref|ZP_10587554.1| 50S ribosomal protein L4, bacterial/organelle [Phyllobacterium sp.
YR531]
gi|398216841|gb|EJN03381.1| 50S ribosomal protein L4, bacterial/organelle [Phyllobacterium sp.
YR531]
Length = 206
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T D G + L+ ++F + R DI+ R+VR+QLA++QQGTH KT SE++ TG K
Sbjct: 3 LTITTLEGADAGKLKLSEEIFGLEPRDDILQRMVRYQLARKQQGTHKAKTRSEIARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPC 193
++QKGTGRARH + R PQ + KA P
Sbjct: 63 MYKQKGTGRARHHSARAPQ---FRGGGKAHGPV 92
>gi|436842983|ref|YP_007327361.1| ribosomal protein L4 [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432171889|emb|CCO25262.1| ribosomal protein L4 [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 206
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 55/78 (70%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + N++ G M LA +VF+VP++ +I+H VVR QLA ++ GTH+TKT G G K
Sbjct: 4 ITIYDQTNKEVGSMDLAPEVFEVPVKPEILHLVVRSQLAAKRSGTHATKTRGMKRGGGAK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRAR G+ R P
Sbjct: 64 PWRQKGTGRARAGSTRSP 81
>gi|379707020|ref|YP_005262225.1| 50S ribosomal protein L4 [Nocardia cyriacigeorgica GUH-2]
gi|374844519|emb|CCF61581.1| 50S ribosomal protein L4 [Nocardia cyriacigeorgica GUH-2]
Length = 226
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 53/82 (64%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L +PV + G + L ++FD ++H+VV QLA +QGTHSTKT EV G
Sbjct: 11 NLTLPVKELGGKTNGTVELPAEIFDATANIALMHQVVVAQLAAARQGTHSTKTRGEVRGG 70
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
GKKP+RQKGTGRAR G+ R PQ
Sbjct: 71 GKKPYRQKGTGRARQGSTRAPQ 92
>gi|293190258|ref|ZP_06608754.1| ribosomal protein L4/L1 family protein [Actinomyces odontolyticus
F0309]
gi|292821074|gb|EFF80027.1| ribosomal protein L4/L1 family protein [Actinomyces odontolyticus
F0309]
Length = 216
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 56/85 (65%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ D + V + + G +VL G +FDVP ++H+VV QLA +QGTH+TKT EV
Sbjct: 3 MADDRNVDVIDIKGKKAGSVVLPGSIFDVPTNIPLMHQVVVAQLAAARQGTHATKTRGEV 62
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
+G GKKP+RQKGTG AR G++R P
Sbjct: 63 AGGGKKPFRQKGTGNARQGSIRAPH 87
>gi|116748991|ref|YP_845678.1| 50S ribosomal protein L4 [Syntrophobacter fumaroxidans MPOB]
gi|166199918|sp|A0LIJ1.1|RL4_SYNFM RecName: Full=50S ribosomal protein L4
gi|116698055|gb|ABK17243.1| LSU ribosomal protein L4P [Syntrophobacter fumaroxidans MPOB]
Length = 207
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 56/81 (69%), Gaps = 3/81 (3%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + FN ++ G + L+ VF VP+R ++H VV +QLAKR+ GT TK S+V+G
Sbjct: 1 MPTVDIFNTNRDVVGQLELSDAVFAVPLRPHVLHEVVLYQLAKRRAGTVKTKGRSDVAGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGP 178
GKKPWRQKGTGRAR GT R P
Sbjct: 61 GKKPWRQKGTGRARAGTSRSP 81
>gi|242278659|ref|YP_002990788.1| 50S ribosomal protein L4 [Desulfovibrio salexigens DSM 2638]
gi|259491552|sp|C6C186.1|RL4_DESAD RecName: Full=50S ribosomal protein L4
gi|242121553|gb|ACS79249.1| ribosomal protein L4/L1e [Desulfovibrio salexigens DSM 2638]
Length = 206
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 55/78 (70%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + ++ G M LA +VF+VP++ +I+H VVR QLA ++QGTH+TKT G G K
Sbjct: 4 ITIYDQTKKEVGSMDLAPEVFEVPVKPEILHLVVRSQLAAKRQGTHATKTRGMKRGGGAK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRAR G+ R P
Sbjct: 64 PWRQKGTGRARAGSTRSP 81
>gi|383501401|ref|YP_005414760.1| 50S ribosomal protein L4 [Rickettsia australis str. Cutlack]
gi|378932412|gb|AFC70917.1| 50S ribosomal protein L4 [Rickettsia australis str. Cutlack]
Length = 207
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEVSGT KKP
Sbjct: 5 ILSLANEEVGEISLNEDIFAVEFIRNDIIKQVIDWQRAKAMSGNHKTKTVSEVSGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQ 179
++QKGTG AR G+LR Q
Sbjct: 65 FKQKGTGNARQGSLRSVQ 82
>gi|190891356|ref|YP_001977898.1| 50S ribosomal protein L4 [Rhizobium etli CIAT 652]
gi|226730712|sp|B3PWS2.1|RL4_RHIE6 RecName: Full=50S ribosomal protein L4
gi|190696635|gb|ACE90720.1| 50S ribosomal protein L4 [Rhizobium etli CIAT 652]
Length = 206
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V +D G + L+ +F + R+DI+ RV+RWQLAK+QQGTH K +EVS TG
Sbjct: 1 MELNVKTLEGKDAGKVSLSDAIFGLEPREDILARVIRWQLAKKQQGTHKAKGRAEVSRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
K ++QKGTGRARH + R PQ + KA P +
Sbjct: 61 AKMYKQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|443489527|ref|YP_007367674.1| 50S ribosomal protein L4, RplD [Mycobacterium liflandii 128FXT]
gi|442582024|gb|AGC61167.1| 50S ribosomal protein L4, RplD [Mycobacterium liflandii 128FXT]
Length = 224
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 96 HQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVS 155
+DL I V + G +VL ++FDVP ++H+VV Q A +QGTHSTKT +VS
Sbjct: 9 QKDLEIQVKAPDGKVDGSVVLPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGDVS 68
Query: 156 GTGKKPWRQKGTGRARHGTLRGPQ 179
G G+KP+RQKGTGRAR G+ R PQ
Sbjct: 69 GGGRKPYRQKGTGRARQGSTRAPQ 92
>gi|395777952|ref|ZP_10458465.1| 50S ribosomal protein L4 [Bartonella elizabethae Re6043vi]
gi|423715878|ref|ZP_17690099.1| 50S ribosomal protein L4 [Bartonella elizabethae F9251]
gi|395418261|gb|EJF84588.1| 50S ribosomal protein L4 [Bartonella elizabethae Re6043vi]
gi|395429180|gb|EJF95254.1| 50S ribosomal protein L4 [Bartonella elizabethae F9251]
Length = 206
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + + G + ++ +FD+ R+DI+ RVVRWQL++RQQGTH ++ S+VS T
Sbjct: 2 DLVIKTLD--GREAGKLKVSESIFDLVPREDILQRVVRWQLSRRQQGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
G K ++QKGTGRARH + R PQ + KA P +
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQ---FRGGGKAHGPVVR 94
>gi|336179781|ref|YP_004585156.1| 50S ribosomal protein L4 [Frankia symbiont of Datisca glomerata]
gi|334860761|gb|AEH11235.1| ribosomal protein L4/L1e [Frankia symbiont of Datisca glomerata]
Length = 263
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 110 DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGR 169
+ G + L G++FDV + +IH+VV QLA +QGTHST+T EV G G+KP+RQKGTGR
Sbjct: 37 EAGSVDLPGEIFDVALNVPLIHQVVVAQLAAARQGTHSTRTRGEVRGGGRKPYRQKGTGR 96
Query: 170 ARHGTLRGPQ 179
AR G+LR PQ
Sbjct: 97 ARQGSLRAPQ 106
>gi|302344355|ref|YP_003808884.1| 50S ribosomal protein L4 [Desulfarculus baarsii DSM 2075]
gi|301640968|gb|ADK86290.1| ribosomal protein L4/L1e [Desulfarculus baarsii DSM 2075]
Length = 206
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + ++E K G + LA +VF ++ ++H VV WQLAKR+ GT TKT SEV G
Sbjct: 1 MPKVDVYDEKKQKVGEIELADEVFAAEVKAHLLHEVVVWQLAKRRAGTACTKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGP 178
G+KPWRQKGTGRAR G+ R P
Sbjct: 61 GRKPWRQKGTGRARVGSRRSP 81
>gi|209548936|ref|YP_002280853.1| 50S ribosomal protein L4 [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|424914485|ref|ZP_18337849.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|226730713|sp|B5ZYT6.1|RL4_RHILW RecName: Full=50S ribosomal protein L4
gi|209534692|gb|ACI54627.1| ribosomal protein L4/L1e [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|392850661|gb|EJB03182.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. trifolii WSM597]
Length = 206
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ +F + R+DI+ RV+RWQLAK+QQGTH K +EVS TG K +
Sbjct: 5 VKTLEGKDAGKVSLSDAIFGLEPREDILARVIRWQLAKKQQGTHKAKGRAEVSRTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
+QKGTGRARH + R PQ + KA P +
Sbjct: 65 KQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|452994820|emb|CCQ93484.1| ribosomal protein L4 [Clostridium ultunense Esp]
Length = 207
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G + L DVF + + + +++ VV+ QLA +QGT S KT +EV G G+K
Sbjct: 4 VNVYNILGEQVGEIELNEDVFGIEVNQHVLYEVVKNQLANSRQGTQSVKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PWRQKGTGRAR G++R P W + A KP
Sbjct: 64 PWRQKGTGRARQGSIRAPH-WVGGGVAFAPKP 94
>gi|255526579|ref|ZP_05393486.1| ribosomal protein L4/L1e [Clostridium carboxidivorans P7]
gi|296187267|ref|ZP_06855663.1| ribosomal protein L4/L1 family protein [Clostridium carboxidivorans
P7]
gi|255509687|gb|EET86020.1| ribosomal protein L4/L1e [Clostridium carboxidivorans P7]
gi|296048138|gb|EFG87576.1| ribosomal protein L4/L1 family protein [Clostridium carboxidivorans
P7]
Length = 206
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G + L+ +VF V + + +H+VV LA ++QGT S KT SEVSG
Sbjct: 1 MPTVGLFNKEGKKVGDVQLSDNVFGVEVNQYALHQVVVALLANKRQGTQSAKTRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
G KPWRQKGTGRAR G++R PQ W + A KP
Sbjct: 61 GIKPWRQKGTGRARQGSIRAPQ-WIHGGMVFAVKP 94
>gi|148381420|ref|YP_001255961.1| 50S ribosomal protein L4 [Clostridium botulinum A str. ATCC 3502]
gi|153933556|ref|YP_001385795.1| 50S ribosomal protein L4 [Clostridium botulinum A str. ATCC 19397]
gi|153934780|ref|YP_001389202.1| 50S ribosomal protein L4 [Clostridium botulinum A str. Hall]
gi|153940969|ref|YP_001392833.1| 50S ribosomal protein L4 [Clostridium botulinum F str. Langeland]
gi|168178833|ref|ZP_02613497.1| ribosomal protein L4 [Clostridium botulinum NCTC 2916]
gi|226950932|ref|YP_002806023.1| 50S ribosomal protein L4 [Clostridium botulinum A2 str. Kyoto]
gi|384463796|ref|YP_005676391.1| 50S ribosomal protein L4 [Clostridium botulinum F str. 230613]
gi|387819761|ref|YP_005680108.1| 50S ribosomal protein L4 [Clostridium botulinum H04402 065]
gi|421834862|ref|ZP_16269789.1| 50S ribosomal protein L4 [Clostridium botulinum CFSAN001627]
gi|166234655|sp|A7FZ68.1|RL4_CLOB1 RecName: Full=50S ribosomal protein L4
gi|166234656|sp|A5I7K5.1|RL4_CLOBH RecName: Full=50S ribosomal protein L4
gi|166234657|sp|A7GJ73.1|RL4_CLOBL RecName: Full=50S ribosomal protein L4
gi|254803725|sp|C1FMV0.1|RL4_CLOBJ RecName: Full=50S ribosomal protein L4
gi|148290904|emb|CAL85040.1| 50S ribosomal protein L4 [Clostridium botulinum A str. ATCC 3502]
gi|152929600|gb|ABS35100.1| 50S ribosomal protein L4 [Clostridium botulinum A str. ATCC 19397]
gi|152930694|gb|ABS36193.1| 50S ribosomal protein L4 [Clostridium botulinum A str. Hall]
gi|152936865|gb|ABS42363.1| 50S ribosomal protein L4 [Clostridium botulinum F str. Langeland]
gi|182670131|gb|EDT82107.1| ribosomal protein L4 [Clostridium botulinum NCTC 2916]
gi|226844588|gb|ACO87254.1| ribosomal protein L4 [Clostridium botulinum A2 str. Kyoto]
gi|295320813|gb|ADG01191.1| 50S ribosomal protein L4 [Clostridium botulinum F str. 230613]
gi|322807805|emb|CBZ05380.1| LSU ribosomal protein L4p (L1e) [Clostridium botulinum H04402 065]
gi|409743654|gb|EKN42547.1| 50S ribosomal protein L4 [Clostridium botulinum CFSAN001627]
Length = 206
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + FN E G + LA VF V + +H+VV+ LA ++QGT S KT +EVSG
Sbjct: 1 MPKVDLFNQNGEKVGDLQLADSVFGVEVNTYAMHQVVKALLANKRQGTQSAKTRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
G KPWRQKGTGRAR G++R PQ W + A KP
Sbjct: 61 GIKPWRQKGTGRARQGSIRAPQ-WIHGGVVFAPKP 94
>gi|402771843|ref|YP_006591380.1| 50S ribosomal protein L4 [Methylocystis sp. SC2]
gi|401773863|emb|CCJ06729.1| 50S ribosomal protein L4 [Methylocystis sp. SC2]
Length = 206
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 65/104 (62%), Gaps = 6/104 (5%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I VT+F + G + L+ +VF + RKD+I R++RWQLAKR+ GTH+ K +E++ +GKK
Sbjct: 3 IDVTSFDGQAAGSIELSDEVFGLEPRKDLIFRMIRWQLAKRRAGTHAVKNRAEIARSGKK 62
Query: 161 PWRQKGTGRARHGTLRGPQ----GWYYN--ARSKAQKPCYKVEQ 198
+QKGTG ARHG+ R PQ G + RS A KV Q
Sbjct: 63 LHKQKGTGGARHGSARAPQFRGGGRAFGPVVRSHAHDLTKKVRQ 106
>gi|260893371|ref|YP_003239468.1| 50S ribosomal protein L4 [Ammonifex degensii KC4]
gi|260865512|gb|ACX52618.1| ribosomal protein L4/L1e [Ammonifex degensii KC4]
Length = 207
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 50/76 (65%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V N E G M L +VF + ++H VV LA R++GTHSTKT EV G G+KPW
Sbjct: 6 VYNLAGEPVGEMELKEEVFGIEPNPYVVHEVVVMHLANRRRGTHSTKTRGEVRGGGRKPW 65
Query: 163 RQKGTGRARHGTLRGP 178
RQKGTGRARHG++R P
Sbjct: 66 RQKGTGRARHGSIRSP 81
>gi|289579144|ref|YP_003477771.1| 50S ribosomal protein L4/L1e [Thermoanaerobacter italicus Ab9]
gi|297545328|ref|YP_003677630.1| 50S ribosomal protein L4/L1e [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|289528857|gb|ADD03209.1| ribosomal protein L4/L1e [Thermoanaerobacter italicus Ab9]
gi|296843103|gb|ADH61619.1| ribosomal protein L4/L1e [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 206
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G + L VF VP+ ++H+ V LA ++QGTHSTKT EV G G+K
Sbjct: 4 VAVYNVKGEQVGEIELKDSVFGVPVNVPVMHQAVLNYLANQRQGTHSTKTRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G++R PQ
Sbjct: 64 PWRQKGTGRARQGSIRAPQ 82
>gi|336430425|ref|ZP_08610372.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336018234|gb|EGN47986.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 206
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L+ VF V + + ++H V WQLA ++QGT KT SEVSG G+K
Sbjct: 4 VAVFNMEGKEVGTLDLSDAVFGVEVNEHLVHMAVVWQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|424894638|ref|ZP_18318212.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|393178865|gb|EJC78904.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 206
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ +F + R+DI+ RV+RWQLAK+QQGTH K +EVS TG K +
Sbjct: 5 VKTLEGKDAGKVSLSDAIFGLEPREDILARVIRWQLAKKQQGTHKAKGRAEVSRTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
+QKGTGRARH + R PQ + KA P +
Sbjct: 65 KQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|116251541|ref|YP_767379.1| 50S ribosomal protein L4 [Rhizobium leguminosarum bv. viciae 3841]
gi|424874859|ref|ZP_18298521.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|424881131|ref|ZP_18304763.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. trifolii WU95]
gi|166199852|sp|Q1MIE0.1|RL4_RHIL3 RecName: Full=50S ribosomal protein L4
gi|115256189|emb|CAK07270.1| putative 50S ribosomal protein L4 [Rhizobium leguminosarum bv.
viciae 3841]
gi|392517494|gb|EIW42226.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. trifolii WU95]
gi|393170560|gb|EJC70607.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 206
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ +F + R+DI+ RV+RWQLAK+QQGTH K +EVS TG K +
Sbjct: 5 VKTLEGKDAGKVSLSDAIFGLEPREDILARVIRWQLAKKQQGTHKAKGRAEVSRTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
+QKGTGRARH + R PQ + KA P +
Sbjct: 65 KQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|78043328|ref|YP_361117.1| 50S ribosomal protein L4 [Carboxydothermus hydrogenoformans Z-2901]
gi|109893583|sp|Q3A9R7.1|RL4_CARHZ RecName: Full=50S ribosomal protein L4
gi|77995443|gb|ABB14342.1| ribosomal protein L4 [Carboxydothermus hydrogenoformans Z-2901]
Length = 206
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+PV N G + L ++F P+ K +++ V LA +++GTH TKT EVSG G+K
Sbjct: 4 VPVYNMEGAQVGEIELKDEIFGAPVNKAVLYEVSLMYLANQRRGTHDTKTRGEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRARHG++R P
Sbjct: 64 PWRQKGTGRARHGSIRSP 81
>gi|323136087|ref|ZP_08071170.1| ribosomal protein L4/L1e [Methylocystis sp. ATCC 49242]
gi|322399178|gb|EFY01697.1| ribosomal protein L4/L1e [Methylocystis sp. ATCC 49242]
Length = 206
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 58/81 (71%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I VT+F + G + L+ DVF + R D+I R++RWQLAKR+ GTH+ K ++++ TG
Sbjct: 1 MKIDVTSFDGQAAGSIELSDDVFGLEPRTDLIFRMIRWQLAKRRAGTHAVKNRADIARTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KK ++QKGTG ARHG+ R PQ
Sbjct: 61 KKMYKQKGTGGARHGSGRAPQ 81
>gi|167036802|ref|YP_001664380.1| 50S ribosomal protein L4 [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|167039521|ref|YP_001662506.1| 50S ribosomal protein L4 [Thermoanaerobacter sp. X514]
gi|256752633|ref|ZP_05493485.1| ribosomal protein L4/L1e [Thermoanaerobacter ethanolicus CCSD1]
gi|300915228|ref|ZP_07132543.1| ribosomal protein L4/L1e [Thermoanaerobacter sp. X561]
gi|307725152|ref|YP_003904903.1| 50S ribosomal protein L4/L1e [Thermoanaerobacter sp. X513]
gi|320115224|ref|YP_004185383.1| 50S ribosomal protein L4/L1e [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|326390660|ref|ZP_08212215.1| ribosomal protein L4/L1e [Thermoanaerobacter ethanolicus JW 200]
gi|345018533|ref|YP_004820886.1| 50S ribosomal protein L4 [Thermoanaerobacter wiegelii Rt8.B1]
gi|392939575|ref|ZP_10305219.1| 50S ribosomal protein L4, bacterial/organelle [Thermoanaerobacter
siderophilus SR4]
gi|226731436|sp|B0KCK1.1|RL4_THEP3 RecName: Full=50S ribosomal protein L4
gi|226731437|sp|B0K5P4.1|RL4_THEPX RecName: Full=50S ribosomal protein L4
gi|166853761|gb|ABY92170.1| ribosomal protein L4/L1e [Thermoanaerobacter sp. X514]
gi|166855636|gb|ABY94044.1| ribosomal protein L4/L1e [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256748453|gb|EEU61505.1| ribosomal protein L4/L1e [Thermoanaerobacter ethanolicus CCSD1]
gi|300888952|gb|EFK84099.1| ribosomal protein L4/L1e [Thermoanaerobacter sp. X561]
gi|307582213|gb|ADN55612.1| ribosomal protein L4/L1e [Thermoanaerobacter sp. X513]
gi|319928315|gb|ADV79000.1| ribosomal protein L4/L1e [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|325993338|gb|EGD51775.1| ribosomal protein L4/L1e [Thermoanaerobacter ethanolicus JW 200]
gi|344033876|gb|AEM79602.1| ribosomal protein L4/L1e [Thermoanaerobacter wiegelii Rt8.B1]
gi|392291325|gb|EIV99768.1| 50S ribosomal protein L4, bacterial/organelle [Thermoanaerobacter
siderophilus SR4]
Length = 206
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G + L VF VP+ ++H V LA ++QGTHSTKT EV G G+K
Sbjct: 4 VAVYNVKGEQVGEIELKDSVFGVPVNVPVMHEAVLNYLANQRQGTHSTKTRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G++R PQ
Sbjct: 64 PWRQKGTGRARQGSIRAPQ 82
>gi|424890778|ref|ZP_18314377.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393172996|gb|EJC73041.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. trifolii WSM2012]
Length = 206
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ +F + R+DI+ RV+RWQLAK+QQGTH K +EVS TG K +
Sbjct: 5 VKTLEGKDAGKVSLSDAIFGLEPREDILARVIRWQLAKKQQGTHKAKGRAEVSRTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
+QKGTGRARH + R PQ + KA P +
Sbjct: 65 KQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|239948318|ref|ZP_04700071.1| ribosomal protein L4/L1 family protein [Rickettsia endosymbiont of
Ixodes scapularis]
gi|241563414|ref|XP_002401694.1| ribosomal protein L4, putative [Ixodes scapularis]
gi|215501886|gb|EEC11380.1| ribosomal protein L4, putative [Ixodes scapularis]
gi|239922594|gb|EER22618.1| ribosomal protein L4/L1 family protein [Rickettsia endosymbiont of
Ixodes scapularis]
Length = 207
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEVSGT KKP
Sbjct: 5 ILSLANEEVGEISLNEDIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVSGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQ 179
++QKGTG AR G+LR Q
Sbjct: 65 FKQKGTGNARQGSLRSVQ 82
>gi|312622046|ref|YP_004023659.1| 50S ribosomal protein L4/L1e [Caldicellulosiruptor kronotskyensis
2002]
gi|312202513|gb|ADQ45840.1| ribosomal protein L4/L1e [Caldicellulosiruptor kronotskyensis 2002]
Length = 208
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+PV N + G + L +F+VPI ++H+ V LA R+QGT + KT +EV G G+K
Sbjct: 4 VPVYNIEGQQIGEIELNDSIFNVPINNHVLHQAVVAHLANRRQGTFAAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PWRQKGTGRAR G++R P W A+KP
Sbjct: 64 PWRQKGTGRARQGSIRAPT-WRKGGVVFAKKP 94
>gi|168181865|ref|ZP_02616529.1| 50S ribosomal protein L4 [Clostridium botulinum Bf]
gi|237796941|ref|YP_002864493.1| 50S ribosomal protein L4 [Clostridium botulinum Ba4 str. 657]
gi|259491549|sp|C3KVQ0.1|RL4_CLOB6 RecName: Full=50S ribosomal protein L4
gi|182674730|gb|EDT86691.1| 50S ribosomal protein L4 [Clostridium botulinum Bf]
gi|229261648|gb|ACQ52681.1| 50S ribosomal protein L4 [Clostridium botulinum Ba4 str. 657]
Length = 206
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + FN E G + LA VF V + +H+VV+ LA ++QGT S KT +EVSG
Sbjct: 1 MPKVDLFNQNGEKVGDLQLADSVFGVEVNTYAMHQVVKALLANKRQGTQSAKTRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
G KPWRQKGTGRAR G++R PQ W + A KP
Sbjct: 61 GIKPWRQKGTGRARQGSIRAPQ-WIHGGIVFAPKP 94
>gi|404443138|ref|ZP_11008311.1| 50S ribosomal protein L4 [Mycobacterium vaccae ATCC 25954]
gi|403656052|gb|EJZ10876.1| 50S ribosomal protein L4 [Mycobacterium vaccae ATCC 25954]
Length = 222
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 50/68 (73%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDV ++H+VV QLA ++QGTHSTKT EVSG GKKP+RQKGTGRAR
Sbjct: 16 GSIELPAELFDVEPNIALMHQVVNAQLAAKRQGTHSTKTRGEVSGGGKKPYRQKGTGRAR 75
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 76 QGSTRAPQ 83
>gi|67458671|ref|YP_246295.1| 50S ribosomal protein L4 [Rickettsia felis URRWXCal2]
gi|75536864|sp|Q4UMS8.1|RL4_RICFE RecName: Full=50S ribosomal protein L4
gi|67004204|gb|AAY61130.1| 50S ribosomal protein L4 [Rickettsia felis URRWXCal2]
Length = 207
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEVSGT KKP
Sbjct: 5 ILSLANEEVGEISLNEDIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVSGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQ 179
++QKGTG AR G+LR Q
Sbjct: 65 FKQKGTGNARQGSLRSVQ 82
>gi|108797987|ref|YP_638184.1| 50S ribosomal protein L4 [Mycobacterium sp. MCS]
gi|119867083|ref|YP_937035.1| 50S ribosomal protein L4 [Mycobacterium sp. KMS]
gi|126433649|ref|YP_001069340.1| 50S ribosomal protein L4 [Mycobacterium sp. JLS]
gi|122977349|sp|Q1BDA6.1|RL4_MYCSS RecName: Full=50S ribosomal protein L4
gi|166234689|sp|A3PVC2.1|RL4_MYCSJ RecName: Full=50S ribosomal protein L4
gi|166234690|sp|A1UBN7.1|RL4_MYCSK RecName: Full=50S ribosomal protein L4
gi|108768406|gb|ABG07128.1| LSU ribosomal protein L4P [Mycobacterium sp. MCS]
gi|119693172|gb|ABL90245.1| LSU ribosomal protein L4P [Mycobacterium sp. KMS]
gi|126233449|gb|ABN96849.1| LSU ribosomal protein L4P [Mycobacterium sp. JLS]
Length = 219
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 50/68 (73%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDV ++H+VV QLA ++QGTHSTKT EVSG GKKP+RQKGTGRAR
Sbjct: 16 GSVELPAELFDVEANIALMHQVVTAQLAAKRQGTHSTKTRGEVSGGGKKPYRQKGTGRAR 75
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 76 QGSTRAPQ 83
>gi|187776577|ref|ZP_02993050.1| hypothetical protein CLOSPO_00091 [Clostridium sporogenes ATCC
15579]
gi|187775236|gb|EDU39038.1| 50S ribosomal protein L4 [Clostridium sporogenes ATCC 15579]
Length = 206
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + FN E G + LA VF V + +H+VV+ LA ++QGT S KT +EVSG
Sbjct: 1 MPKVDLFNQNGEKVGDLQLADSVFGVEVNTYAMHQVVKALLANKRQGTQSAKTRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
G KPWRQKGTGRAR G++R PQ W + A KP
Sbjct: 61 GIKPWRQKGTGRARQGSIRAPQ-WIHGGIVFAPKP 94
>gi|240850834|ref|YP_002972234.1| 50S ribosomal protein L4 [Bartonella grahamii as4aup]
gi|240267957|gb|ACS51545.1| 50S ribosomal protein L4 [Bartonella grahamii as4aup]
Length = 206
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + + G + ++ +FD+ R+DI+ RVVRWQLA+RQQG+H ++ S+VS T
Sbjct: 2 DLVIKTLD--GNEAGKLKVSEAIFDLVPREDILQRVVRWQLARRQQGSHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
G K ++QKGTGRARH + R PQ + KA P +
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQ---FRGGGKAHGPVVR 94
>gi|424835392|ref|ZP_18260057.1| 50S ribosomal protein L4 [Clostridium sporogenes PA 3679]
gi|365978185|gb|EHN14280.1| 50S ribosomal protein L4 [Clostridium sporogenes PA 3679]
Length = 206
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + FN E G + LA VF V + +H+VV+ LA ++QGT S KT +EVSG
Sbjct: 1 MPKVDLFNQNGEKVGDLQLADSVFGVEVNTYAMHQVVKALLANKRQGTQSAKTRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
G KPWRQKGTGRAR G++R PQ W + A KP
Sbjct: 61 GIKPWRQKGTGRARQGSIRAPQ-WIHGGIVFAPKP 94
>gi|58584598|ref|YP_198171.1| 50S ribosomal protein L4 [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|75497927|sp|Q5GSU5.1|RL4_WOLTR RecName: Full=50S ribosomal protein L4
gi|58418914|gb|AAW70929.1| Ribosomal protein L4 [Wolbachia endosymbiont strain TRS of Brugia
malayi]
Length = 204
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 50/77 (64%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N N D G L +F V + I+H +VRWQLAKR+ GTH K IS+VSGT KP+
Sbjct: 5 LVNLSNNDVGTTQLNPLIFSVEQKLSILHDIVRWQLAKRRAGTHKVKGISDVSGTTAKPY 64
Query: 163 RQKGTGRARHGTLRGPQ 179
QK TGRAR G+LR PQ
Sbjct: 65 SQKRTGRARQGSLRSPQ 81
>gi|157804034|ref|YP_001492583.1| 50S ribosomal protein L4 [Rickettsia canadensis str. McKiel]
gi|379023181|ref|YP_005299842.1| 50S ribosomal protein L4 [Rickettsia canadensis str. CA410]
gi|166199857|sp|A8EZL5.1|RL4_RICCK RecName: Full=50S ribosomal protein L4
gi|157785297|gb|ABV73798.1| 50S ribosomal protein L4 [Rickettsia canadensis str. McKiel]
gi|376324119|gb|AFB21360.1| 50S ribosomal protein L4 [Rickettsia canadensis str. CA410]
Length = 207
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEVSGT KKP
Sbjct: 5 ILSLANEEVGEISLNKDIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVSGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQ 179
++QKGTG AR G+LR Q
Sbjct: 65 FKQKGTGNARQGSLRSVQ 82
>gi|289449461|ref|YP_003475783.1| 50S ribosomal protein L4 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184008|gb|ADC90433.1| 50S ribosomal protein L4 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 207
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 51/68 (75%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ VF + + ++H+VV+ QLA R+QGT STKT SEVSG GK+PWRQKGTGRAR
Sbjct: 15 GQIELSDAVFGIEPNQSVMHQVVKNQLANRRQGTGSTKTRSEVSGGGKRPWRQKGTGRAR 74
Query: 172 HGTLRGPQ 179
HG+ R Q
Sbjct: 75 HGSTRSAQ 82
>gi|317050529|ref|YP_004111645.1| 50S ribosomal protein L4/L1e [Desulfurispirillum indicum S5]
gi|316945613|gb|ADU65089.1| ribosomal protein L4/L1e [Desulfurispirillum indicum S5]
Length = 207
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 52/79 (65%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
V+ V N NE G + L+ ++F ++ ++H VV QLA R+QGTH+ K S VSG G
Sbjct: 3 VVSVINVNNEKVGEVALSDELFGGAVKPHLMHEVVVAQLAARRQGTHAVKNRSAVSGGGS 62
Query: 160 KPWRQKGTGRARHGTLRGP 178
KPWRQKGTGRAR GT R P
Sbjct: 63 KPWRQKGTGRARAGTSRSP 81
>gi|147676656|ref|YP_001210871.1| 50S ribosomal protein L4 [Pelotomaculum thermopropionicum SI]
gi|189029511|sp|A5D5J1.1|RL4_PELTS RecName: Full=50S ribosomal protein L4
gi|146272753|dbj|BAF58502.1| ribosomal protein L4 [Pelotomaculum thermopropionicum SI]
Length = 206
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N E G + L ++F V + + ++H V LA R+ GTH TKT SEV G
Sbjct: 1 MPTVALYNTNGEQVGELALKDEIFGVEVHEPVLHDAVVMHLANRRLGTHDTKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGP 178
G+KPWRQKGTGRARHG++R P
Sbjct: 61 GRKPWRQKGTGRARHGSIRSP 81
>gi|170754589|ref|YP_001783120.1| 50S ribosomal protein L4 [Clostridium botulinum B1 str. Okra]
gi|226730644|sp|B1IGF3.1|RL4_CLOBK RecName: Full=50S ribosomal protein L4
gi|169119801|gb|ACA43637.1| 50S ribosomal protein L4 [Clostridium botulinum B1 str. Okra]
Length = 206
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + FN E G + LA VF V + +H+VV+ LA ++QGT S KT +EVSG
Sbjct: 1 MPKIDLFNQNGEKVGDLQLADSVFGVEVNTYAMHQVVKALLANKRQGTQSAKTRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
G KPWRQKGTGRAR G++R PQ W + A KP
Sbjct: 61 GIKPWRQKGTGRARQGSIRAPQ-WIHGGIVFAPKP 94
>gi|241204166|ref|YP_002975262.1| 50S ribosomal protein L4 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240858056|gb|ACS55723.1| ribosomal protein L4/L1e [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 206
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ +F + R+DI+ RV+RWQLAK+QQGTH K +E+S TG K +
Sbjct: 5 VKTLEGKDAGKVSLSDAIFGLEPREDILARVIRWQLAKKQQGTHKAKGRAEISRTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
+QKGTGRARH + R PQ + KA P +
Sbjct: 65 KQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|414162148|ref|ZP_11418395.1| 50S ribosomal protein L4 [Afipia felis ATCC 53690]
gi|410879928|gb|EKS27768.1| 50S ribosomal protein L4 [Afipia felis ATCC 53690]
Length = 206
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 55/81 (67%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT + G + L+ ++F + RKDII RVV WQLAKRQ GTH TK +EV TG
Sbjct: 1 MELNVTTLEGKAAGSVSLSDEIFGLEPRKDIIQRVVNWQLAKRQAGTHKTKGRAEVWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KK ++QKGTG ARHG+ R PQ
Sbjct: 61 KKMYKQKGTGGARHGSARVPQ 81
>gi|222529729|ref|YP_002573611.1| 50S ribosomal protein L4 [Caldicellulosiruptor bescii DSM 6725]
gi|254803711|sp|B9MKI0.1|RL4_ANATD RecName: Full=50S ribosomal protein L4
gi|222456576|gb|ACM60838.1| ribosomal protein L4/L1e [Caldicellulosiruptor bescii DSM 6725]
Length = 208
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+PV N + G + L +F+VPI ++H+ V LA R+QGT + KT +EV G G+K
Sbjct: 4 VPVYNIEGQQIGEIELNDSIFNVPINTHVLHQAVVAHLANRRQGTFAAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PWRQKGTGRAR G++R P W A+KP
Sbjct: 64 PWRQKGTGRARQGSIRAPT-WRKGGVVFAKKP 94
>gi|302871499|ref|YP_003840135.1| 50S ribosomal protein L4 [Caldicellulosiruptor obsidiansis OB47]
gi|312135495|ref|YP_004002833.1| 50S ribosomal protein L4/L1e [Caldicellulosiruptor owensensis OL]
gi|302574358|gb|ADL42149.1| ribosomal protein L4/L1e [Caldicellulosiruptor obsidiansis OB47]
gi|311775546|gb|ADQ05033.1| ribosomal protein L4/L1e [Caldicellulosiruptor owensensis OL]
Length = 208
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+PV N + G + L +F+VPI ++H+ V LA R+QGT + KT +EV G G+K
Sbjct: 4 VPVYNIEGQQIGEIELNDSIFNVPINTHVLHQAVVAHLANRRQGTFAAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PWRQKGTGRAR G++R P W A+KP
Sbjct: 64 PWRQKGTGRARQGSIRAPT-WRKGGVVFAKKP 94
>gi|15604504|ref|NP_221022.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. Madrid E]
gi|383486649|ref|YP_005404329.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. GvV257]
gi|383488057|ref|YP_005405736.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. Chernikova]
gi|383488902|ref|YP_005406580.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. Katsinyian]
gi|383489742|ref|YP_005407419.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. Dachau]
gi|383499882|ref|YP_005413243.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. BuV67-CWPP]
gi|383500719|ref|YP_005414079.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. RpGvF24]
gi|386082522|ref|YP_005999099.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. Rp22]
gi|6226007|sp|Q9ZCQ6.1|RL4_RICPR RecName: Full=50S ribosomal protein L4
gi|3861198|emb|CAA15098.1| 50S RIBOSOMAL PROTEIN L4 (rplD) [Rickettsia prowazekii str. Madrid
E]
gi|292572286|gb|ADE30201.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. Rp22]
gi|380757014|gb|AFE52251.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. GvV257]
gi|380758416|gb|AFE53652.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. RpGvF24]
gi|380760936|gb|AFE49458.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. Chernikova]
gi|380761781|gb|AFE50302.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. Katsinyian]
gi|380762628|gb|AFE51148.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. BuV67-CWPP]
gi|380763465|gb|AFE51984.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. Dachau]
Length = 207
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEVSGT KKP
Sbjct: 5 ILSLANEEVGEITLNKDIFAVEFIRDDIIKQVIDWQRAKAMFGNHKTKTVSEVSGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQ 179
++QKGTG AR G+LR Q
Sbjct: 65 FKQKGTGNARQGSLRSVQ 82
>gi|312127227|ref|YP_003992101.1| 50S ribosomal protein L4/L1e [Caldicellulosiruptor hydrothermalis
108]
gi|312793938|ref|YP_004026861.1| 50S ribosomal protein L4/L1e [Caldicellulosiruptor kristjanssonii
177R1B]
gi|344996424|ref|YP_004798767.1| 50S ribosomal protein L4 [Caldicellulosiruptor lactoaceticus 6A]
gi|311777246|gb|ADQ06732.1| ribosomal protein L4/L1e [Caldicellulosiruptor hydrothermalis 108]
gi|312181078|gb|ADQ41248.1| ribosomal protein L4/L1e [Caldicellulosiruptor kristjanssonii
177R1B]
gi|343964643|gb|AEM73790.1| ribosomal protein L4/L1e [Caldicellulosiruptor lactoaceticus 6A]
Length = 208
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+PV N + G + L +F+VPI ++H+ V LA R+QGT + KT +EV G G+K
Sbjct: 4 VPVYNIEGQQIGEIELNDSIFNVPINTHVLHQAVVAHLANRRQGTFAAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PWRQKGTGRAR G++R P W A+KP
Sbjct: 64 PWRQKGTGRARQGSIRAPT-WRKGGVVFAKKP 94
>gi|118616572|ref|YP_904904.1| 50S ribosomal protein L4 [Mycobacterium ulcerans Agy99]
gi|166234692|sp|A0PM64.1|RL4_MYCUA RecName: Full=50S ribosomal protein L4
gi|118568682|gb|ABL03433.1| 50S ribosomal protein L4, RplD [Mycobacterium ulcerans Agy99]
Length = 224
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 96 HQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVS 155
+DL I V + G +VL ++FDVP ++H+VV Q A +QGTHSTKT +VS
Sbjct: 9 QKDLEIQVKAPDGKVDGSVVLPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGDVS 68
Query: 156 GTGKKPWRQKGTGRARHGTLRGPQ 179
G G+KP+RQKGTGRAR G+ R PQ
Sbjct: 69 GGGRKPYRQKGTGRARQGSTRTPQ 92
>gi|157826062|ref|YP_001493782.1| 50S ribosomal protein L4 [Rickettsia akari str. Hartford]
gi|166199855|sp|A8GPE9.1|RL4_RICAH RecName: Full=50S ribosomal protein L4
gi|157800020|gb|ABV75274.1| 50S ribosomal protein L4 [Rickettsia akari str. Hartford]
Length = 207
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + NE+ G + L D+F V IR D+I +V+ WQ AK G H TKT+SEVSGT KKP
Sbjct: 5 ILSLANEEVGEISLNEDIFAVEFIRDDVIKQVIDWQRAKAMSGNHKTKTVSEVSGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQ 179
++QKGTG AR G+LR Q
Sbjct: 65 FKQKGTGNARQGSLRSVQ 82
>gi|146297284|ref|YP_001181055.1| 50S ribosomal protein L4 [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|166234648|sp|A4XLS9.1|RL4_CALS8 RecName: Full=50S ribosomal protein L4
gi|145410860|gb|ABP67864.1| ribosomal protein L4/L1e [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 208
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+PV N + G + L +F+VPI ++H+ V LA R+QGT + KT +EV G G+K
Sbjct: 4 VPVYNIEGQQIGEIELNDSIFNVPINTHVLHQAVVAHLANRRQGTFAAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PWRQKGTGRAR G++R P W A+KP
Sbjct: 64 PWRQKGTGRARQGSIRAPT-WRKGGVVFAKKP 94
>gi|409402007|ref|ZP_11251633.1| 50S ribosomal protein L4 [Acidocella sp. MX-AZ02]
gi|409129325|gb|EKM99183.1| 50S ribosomal protein L4 [Acidocella sp. MX-AZ02]
Length = 204
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 53/79 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V +F + G + L ++F R DII RV+ WQLAKR+ GTH K + EVSGT +K
Sbjct: 3 LDVVDFDAKAAGSVELPDELFAAEPRVDIIARVIHWQLAKRRAGTHKVKGMGEVSGTTRK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P++QKGTG AR G+LR PQ
Sbjct: 63 PYKQKGTGNARQGSLRAPQ 81
>gi|183981054|ref|YP_001849345.1| 50S ribosomal protein L4 [Mycobacterium marinum M]
gi|226730696|sp|B2HSN2.1|RL4_MYCMM RecName: Full=50S ribosomal protein L4
gi|183174380|gb|ACC39490.1| 50S ribosomal protein L4, RplD [Mycobacterium marinum M]
Length = 224
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 55/84 (65%)
Query: 96 HQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVS 155
+DL I V + G + L ++FDVP ++H+VV Q A +QGTHSTKT +VS
Sbjct: 9 QKDLEIQVKTPDGKVDGSVALPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGDVS 68
Query: 156 GTGKKPWRQKGTGRARHGTLRGPQ 179
G G+KP+RQKGTGRAR G+ R PQ
Sbjct: 69 GGGRKPYRQKGTGRARQGSTRAPQ 92
>gi|397670938|ref|YP_006512473.1| 50S ribosomal protein L4 [Propionibacterium propionicum F0230a]
gi|395141018|gb|AFN45125.1| 50S ribosomal protein L4 [Propionibacterium propionicum F0230a]
Length = 235
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 47/67 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G L G++FDV +IH+VV QLA +QGTHSTKT EV G G KPWRQKGTGRAR
Sbjct: 17 GTAELPGEIFDVQTNIPLIHQVVVAQLAAARQGTHSTKTRGEVRGGGSKPWRQKGTGRAR 76
Query: 172 HGTLRGP 178
HG+ R P
Sbjct: 77 HGSRRSP 83
>gi|395793268|ref|ZP_10472673.1| 50S ribosomal protein L4 [Bartonella vinsonii subsp. arupensis
Pm136co]
gi|423713038|ref|ZP_17687298.1| 50S ribosomal protein L4 [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395424664|gb|EJF90844.1| 50S ribosomal protein L4 [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395431582|gb|EJF97600.1| 50S ribosomal protein L4 [Bartonella vinsonii subsp. arupensis
Pm136co]
Length = 207
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V + G + ++ +F + R+DI+ RVVRWQLA+RQQGTH ++ S+VS TG K
Sbjct: 4 IVVKTLDGNEAGKLKVSEGIFGLVPREDILQRVVRWQLARRQQGTHQSQGRSDVSRTGAK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
++QKGTGRARH + R PQ + KA P ++
Sbjct: 64 MFKQKGTGRARHSSARAPQ---FRGGGKAHGPVFR 95
>gi|85057801|ref|YP_456717.1| 50S ribosomal protein L4 [Aster yellows witches'-broom phytoplasma
AYWB]
gi|109893576|sp|Q2NIV5.1|RL4_AYWBP RecName: Full=50S ribosomal protein L4
gi|84789906|gb|ABC65638.1| LSU ribosomal protein L1E [Aster yellows witches'-broom phytoplasma
AYWB]
Length = 207
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Query: 101 IPVTNFFNEDKGFM---VLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P N N+ + VLA VFD+ + +++ VV Q A +QGTH+TKT + V+G
Sbjct: 1 MPKINILNQQGDLVSEKVLATTVFDIKPNQQVLYDVVNAQRAAMRQGTHATKTRALVAGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGP 178
GKKPWRQKGTGRARHG++R P
Sbjct: 61 GKKPWRQKGTGRARHGSIRSP 81
>gi|426400733|ref|YP_007019705.1| 50S ribosomal protein L4/L1 family protein [Candidatus
Endolissoclinum patella L2]
gi|425857401|gb|AFX98437.1| ribosomal L4/L1 family protein [Candidatus Endolissoclinum patella
L2]
Length = 206
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 51/77 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N + + L +F + RKDI+ RVV WQLAKR+ G H K ISE+SGT KK
Sbjct: 3 IDVINLDAKKTDEIYLDESIFGLETRKDILTRVVNWQLAKRRSGNHKIKGISEISGTTKK 62
Query: 161 PWRQKGTGRARHGTLRG 177
P+RQKGTGRAR G++R
Sbjct: 63 PFRQKGTGRARQGSMRA 79
>gi|148284213|ref|YP_001248303.1| 50S ribosomal protein L4 [Orientia tsutsugamushi str. Boryong]
gi|189183952|ref|YP_001937737.1| 50S ribosomal protein L4 [Orientia tsutsugamushi str. Ikeda]
gi|166234696|sp|A5CCL1.1|RL4_ORITB RecName: Full=50S ribosomal protein L4
gi|226730701|sp|B3CT06.1|RL4_ORITI RecName: Full=50S ribosomal protein L4
gi|146739652|emb|CAM79441.1| 50S ribosomal protein L4 [Orientia tsutsugamushi str. Boryong]
gi|189180723|dbj|BAG40503.1| 50S ribosomal protein L4 [Orientia tsutsugamushi str. Ikeda]
Length = 210
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E + + L VF + R DII V+ WQLAKR GTH TKTIS VSGT KK
Sbjct: 3 VKVYNLLQEIEKEVELNPSVFCLKYRPDIIKLVIDWQLAKRMSGTHCTKTISGVSGTTKK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P++QKGTG AR G+LR Q
Sbjct: 63 PFKQKGTGNARQGSLRSVQ 81
>gi|451940811|ref|YP_007461449.1| 50S ribosomal protein L4 [Bartonella australis Aust/NH1]
gi|451900198|gb|AGF74661.1| 50S ribosomal protein L4 [Bartonella australis Aust/NH1]
Length = 207
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLV+ + + G + L+ +F + R+DI+ RVVRWQLA+RQQGTH ++ S+VS T
Sbjct: 3 DLVVKTLD--GNEVGELKLSESIFGLVPREDILQRVVRWQLARRQQGTHQSQGRSDVSRT 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
G K ++QKGTGRARH + R PQ + KA P +
Sbjct: 61 GAKMFKQKGTGRARHSSARAPQ---FRGGGKAHGPVVR 95
>gi|114327219|ref|YP_744376.1| 50S ribosomal protein L4 [Granulibacter bethesdensis CGDNIH1]
gi|122327801|sp|Q0BUP9.1|RL4_GRABC RecName: Full=50S ribosomal protein L4
gi|114315393|gb|ABI61453.1| LSU ribosomal protein L1E (= L4P) [Granulibacter bethesdensis
CGDNIH1]
Length = 215
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 50/81 (61%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I + N G L ++F R DI+ RVV WQLA R+ GTH K + EVSGT
Sbjct: 1 MQIEIKTLDNGSAGTAELPDEIFAATPRADIMARVVHWQLACRRAGTHKVKGMGEVSGTT 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KKP+RQKGTG AR G+LR PQ
Sbjct: 61 KKPYRQKGTGNARQGSLRAPQ 81
>gi|433645835|ref|YP_007290837.1| LSU ribosomal protein L4P [Mycobacterium smegmatis JS623]
gi|433295612|gb|AGB21432.1| LSU ribosomal protein L4P [Mycobacterium smegmatis JS623]
Length = 231
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 53/81 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + G + L ++FDV ++H+VV QLA ++QGTHSTKT EV G G
Sbjct: 6 LKIDVNTPAGKKDGSVELPAELFDVEPNIALMHQVVEAQLAAKRQGTHSTKTRGEVRGGG 65
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KKP+RQKGTGRAR G+ R PQ
Sbjct: 66 KKPYRQKGTGRARQGSTRAPQ 86
>gi|440785462|ref|ZP_20962219.1| 50S ribosomal protein L4 [Clostridium pasteurianum DSM 525]
gi|440218358|gb|ELP57580.1| 50S ribosomal protein L4 [Clostridium pasteurianum DSM 525]
Length = 206
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G + L+ +VF + D +H+VV LA ++QG S KT SEVSG
Sbjct: 1 MPTVGLFNKEGKKVGDIELSSEVFGTEVNSDALHQVVVALLANKRQGNQSAKTRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
G KPWRQKGTGRAR G++R PQ W + A KP
Sbjct: 61 GIKPWRQKGTGRARQGSIRSPQ-WIHGGIVFAPKP 94
>gi|94987403|ref|YP_595336.1| 50S ribosomal protein L4 [Lawsonia intracellularis PHE/MN1-00]
gi|442556248|ref|YP_007366073.1| 50S ribosomal protein L4 [Lawsonia intracellularis N343]
gi|166234679|sp|Q1MPR2.1|RL4_LAWIP RecName: Full=50S ribosomal protein L4
gi|94731652|emb|CAJ55015.1| ribosomal protein L4 [Lawsonia intracellularis PHE/MN1-00]
gi|441493695|gb|AGC50389.1| 50S ribosomal protein L4 [Lawsonia intracellularis N343]
Length = 206
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 54/79 (68%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
++ V N E+ G + L+ +F+V ++ +I+H VVR QLA ++ GTHS KT VSG G
Sbjct: 3 IVTVYNQQKEETGKINLSSKIFEVQVQPEILHLVVRAQLAAKRAGTHSVKTRGHVSGGGA 62
Query: 160 KPWRQKGTGRARHGTLRGP 178
KPWRQKGTGRAR G+ R P
Sbjct: 63 KPWRQKGTGRARAGSNRSP 81
>gi|389577501|ref|ZP_10167529.1| 50S ribosomal protein L4, bacterial/organelle [Eubacterium
cellulosolvens 6]
gi|389312986|gb|EIM57919.1| 50S ribosomal protein L4, bacterial/organelle [Eubacterium
cellulosolvens 6]
Length = 206
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G M L+ VF V I+++++H+ V QLA +QGT KT SEV G G+K
Sbjct: 4 VSVYNMEGAEVGKMELSDAVFGVEIKENLVHQAVVLQLANNRQGTQKAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRAPQ 82
>gi|256390141|ref|YP_003111705.1| 50S ribosomal protein L4 [Catenulispora acidiphila DSM 44928]
gi|256356367|gb|ACU69864.1| ribosomal protein L4/L1e [Catenulispora acidiphila DSM 44928]
Length = 217
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 47/64 (73%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L G++FDV +IH+VV QLA +QGTH TKT EVSG GKKP+RQKGTGRAR G+
Sbjct: 9 LPGEIFDVQTNIPLIHQVVVAQLAAARQGTHKTKTRGEVSGGGKKPYRQKGTGRARQGST 68
Query: 176 RGPQ 179
R PQ
Sbjct: 69 RAPQ 72
>gi|357020694|ref|ZP_09082925.1| 50S ribosomal protein L4 [Mycobacterium thermoresistibile ATCC
19527]
gi|356478442|gb|EHI11579.1| 50S ribosomal protein L4 [Mycobacterium thermoresistibile ATCC
19527]
Length = 220
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 50/69 (72%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
+G + L ++FDV ++H+VV QLA +QGTHSTKT EV G G+KPWRQKGTGRA
Sbjct: 13 EGSVELPAELFDVEPNIALMHQVVTAQLAAARQGTHSTKTRGEVRGGGRKPWRQKGTGRA 72
Query: 171 RHGTLRGPQ 179
R G+LR PQ
Sbjct: 73 RQGSLRAPQ 81
>gi|330993847|ref|ZP_08317779.1| 50S ribosomal protein L4 [Gluconacetobacter sp. SXCC-1]
gi|329759115|gb|EGG75627.1| 50S ribosomal protein L4 [Gluconacetobacter sp. SXCC-1]
Length = 204
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 49/77 (63%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N G L ++F R DI+ RVV WQLAKR+ GTH K + E+SGT KKP+
Sbjct: 5 IKTLDNGSAGTASLPDEIFAATPRPDILARVVHWQLAKRRAGTHKVKGMGEISGTTKKPY 64
Query: 163 RQKGTGRARHGTLRGPQ 179
RQKGTG AR G+LR PQ
Sbjct: 65 RQKGTGSARQGSLRSPQ 81
>gi|229821622|ref|YP_002883148.1| 50S ribosomal protein L4 [Beutenbergia cavernae DSM 12333]
gi|229567535|gb|ACQ81386.1| ribosomal protein L4/L1e [Beutenbergia cavernae DSM 12333]
Length = 221
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 51/81 (62%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V + + G L DVFDV +IH+VV QLA +QGTH TKT EV G G
Sbjct: 7 LTVDVIDAKGKKSGTADLPADVFDVQTNVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGG 66
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KKP+RQKGTGRAR G+ R PQ
Sbjct: 67 KKPYRQKGTGRARQGSTRAPQ 87
>gi|255282606|ref|ZP_05347161.1| ribosomal protein L4/L1 family protein [Bryantella formatexigens
DSM 14469]
gi|255266899|gb|EET60104.1| 50S ribosomal protein L4 [Marvinbryantia formatexigens DSM 14469]
Length = 206
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G M L+ VF V I + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVYNMEGKEVGTMELSDAVFGVEINEHLVHMAVLSQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRAPQ 82
>gi|118579120|ref|YP_900370.1| 50S ribosomal protein L4 [Pelobacter propionicus DSM 2379]
gi|166199839|sp|A1ALU2.1|RL4_PELPD RecName: Full=50S ribosomal protein L4
gi|118501830|gb|ABK98312.1| LSU ribosomal protein L4P [Pelobacter propionicus DSM 2379]
Length = 207
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 54/79 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N + G + LA DVF+ +++ ++H +R QLA R+ GT TKT SEV+G+GKK
Sbjct: 4 IAVYNMNRQQVGELQLADDVFNADVKEHLMHLALRIQLANRRAGTVKTKTRSEVAGSGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P++QKGTG AR G +R PQ
Sbjct: 64 PFKQKGTGNARQGCVRAPQ 82
>gi|117927516|ref|YP_872067.1| 50S ribosomal protein L4P [Acidothermus cellulolyticus 11B]
gi|117647979|gb|ABK52081.1| LSU ribosomal protein L4P [Acidothermus cellulolyticus 11B]
Length = 220
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 48/64 (75%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L DVFDV + +IH+VV QLA +QGTH T+T EVSG GKKP+RQKGTGRAR G++
Sbjct: 15 LPADVFDVQVNVPLIHQVVVAQLAAARQGTHKTRTRGEVSGGGKKPYRQKGTGRARQGSI 74
Query: 176 RGPQ 179
R PQ
Sbjct: 75 RAPQ 78
>gi|58617355|ref|YP_196554.1| 50S ribosomal protein L4 [Ehrlichia ruminantium str. Gardel]
gi|75432695|sp|Q5FFU1.1|RL4_EHRRG RecName: Full=50S ribosomal protein L4
gi|58416967|emb|CAI28080.1| 50S ribosomal protein L4 [Ehrlichia ruminantium str. Gardel]
Length = 205
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 53/79 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N +++ G + L +F V R DI+ VV WQL+KR+ G H TKTI +VSGT K
Sbjct: 3 VNVINIESQNIGKIDLNPLIFSVNYRPDILKMVVEWQLSKRRVGAHKTKTIGDVSGTTAK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQK TGRAR G+LR PQ
Sbjct: 63 PYRQKHTGRARQGSLRSPQ 81
>gi|404424713|ref|ZP_11006267.1| 50S ribosomal protein L4 [Mycobacterium fortuitum subsp. fortuitum
DSM 46621]
gi|403650611|gb|EJZ05832.1| 50S ribosomal protein L4 [Mycobacterium fortuitum subsp. fortuitum
DSM 46621]
Length = 215
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 53/81 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + G + L +FDV ++H+VV QLA ++QGTHSTKT EVSG G
Sbjct: 3 LKIDVKTPAGKKDGSIELPAALFDVEPNIALMHQVVNAQLAAKRQGTHSTKTRGEVSGGG 62
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KKP+RQKGTGRAR G+ R PQ
Sbjct: 63 KKPYRQKGTGRARQGSTRAPQ 83
>gi|296130494|ref|YP_003637744.1| 50S ribosomal protein L4 [Cellulomonas flavigena DSM 20109]
gi|296022309|gb|ADG75545.1| ribosomal protein L4/L1e [Cellulomonas flavigena DSM 20109]
Length = 228
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 52/81 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V + + G L GDVFDV +IH+VV QLA +QGTH TKT EV G G
Sbjct: 5 LTVDVLDEKGKKAGTADLPGDVFDVTTNVPLIHQVVVAQLAAVRQGTHDTKTRGEVRGGG 64
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KKP++QKGTGRAR G+ R PQ
Sbjct: 65 KKPYKQKGTGRARQGSTRAPQ 85
>gi|222085676|ref|YP_002544206.1| 50S ribosomal protein L4 [Agrobacterium radiobacter K84]
gi|398377350|ref|ZP_10535525.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium sp. AP16]
gi|254803707|sp|B9JDS9.1|RL4_AGRRK RecName: Full=50S ribosomal protein L4
gi|221723124|gb|ACM26280.1| 50S ribosomal protein L4 [Agrobacterium radiobacter K84]
gi|397726688|gb|EJK87120.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium sp. AP16]
Length = 206
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V +D G + L+ +F + R+DII RV+RWQLAK++QGTH + +EVS TG K
Sbjct: 3 LNVKTLEGKDAGKVSLSDAIFGLEPREDIIARVIRWQLAKKRQGTHKAQGRAEVSRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
++QKGTGRARH + R PQ + KA P +
Sbjct: 63 MYKQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|169823853|ref|YP_001691464.1| 50S ribosomal protein L4 [Finegoldia magna ATCC 29328]
gi|302379795|ref|ZP_07268279.1| 50S ribosomal protein L4 [Finegoldia magna ACS-171-V-Col3]
gi|303234753|ref|ZP_07321379.1| 50S ribosomal protein L4 [Finegoldia magna BVS033A4]
gi|417925299|ref|ZP_12568725.1| 50S ribosomal protein L4 [Finegoldia magna SY403409CC001050417]
gi|226730666|sp|B0RZU1.1|RL4_FINM2 RecName: Full=50S ribosomal protein L4
gi|167830658|dbj|BAG07574.1| 50S ribosomal protein L4 [Finegoldia magna ATCC 29328]
gi|302312383|gb|EFK94380.1| 50S ribosomal protein L4 [Finegoldia magna ACS-171-V-Col3]
gi|302494094|gb|EFL53874.1| 50S ribosomal protein L4 [Finegoldia magna BVS033A4]
gi|341592019|gb|EGS34915.1| 50S ribosomal protein L4 [Finegoldia magna SY403409CC001050417]
Length = 207
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 54/79 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E+ G + L +F V + + +++ VV+ QLA ++QGT S KT SEV G G+K
Sbjct: 4 VQILNQQGENVGELELNEAIFGVDVNEHVVYEVVKNQLANKRQGTQSAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G++R PQ
Sbjct: 64 PWRQKGTGRARQGSIRSPQ 82
>gi|441204845|ref|ZP_20972301.1| 50S ribosomal protein L4 [Mycobacterium smegmatis MKD8]
gi|440629311|gb|ELQ91101.1| 50S ribosomal protein L4 [Mycobacterium smegmatis MKD8]
Length = 209
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 50/68 (73%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDV ++H+VV QLA ++QGTHSTKT EVSG GKKP+RQKGTGRAR
Sbjct: 10 GSVELPAELFDVEPNIALMHQVVTAQLAAKRQGTHSTKTRGEVSGGGKKPYRQKGTGRAR 69
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 70 QGSTRAPQ 77
>gi|409436835|ref|ZP_11263994.1| 50S ribosomal subunit protein L4 [Rhizobium mesoamericanum STM3625]
gi|408751309|emb|CCM75148.1| 50S ribosomal subunit protein L4 [Rhizobium mesoamericanum STM3625]
Length = 206
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ +F + R+DI+ RV+RWQLAK+QQGTH K ++VS TG K +
Sbjct: 5 VKTLEGKDAGKVSLSDAIFGLEPREDILARVIRWQLAKKQQGTHQAKGRADVSRTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
+QKGTGRARH + R PQ + KA P +
Sbjct: 65 KQKGTGRARHHSARAPQ---FRGGGKAHGPVAR 94
>gi|118470088|ref|YP_885820.1| 50S ribosomal protein L4 [Mycobacterium smegmatis str. MC2 155]
gi|399985821|ref|YP_006566169.1| 50S ribosomal protein L4 [Mycobacterium smegmatis str. MC2 155]
gi|166234688|sp|A0QSD2.1|RL4_MYCS2 RecName: Full=50S ribosomal protein L4
gi|118171375|gb|ABK72271.1| ribosomal protein L4/L1 family protein [Mycobacterium smegmatis
str. MC2 155]
gi|399230381|gb|AFP37874.1| 50S ribosomal protein L4 [Mycobacterium smegmatis str. MC2 155]
Length = 215
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 50/68 (73%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDV ++H+VV QLA ++QGTHSTKT EVSG GKKP+RQKGTGRAR
Sbjct: 16 GSVELPAELFDVEPNIALMHQVVTAQLAAKRQGTHSTKTRGEVSGGGKKPYRQKGTGRAR 75
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 76 QGSTRAPQ 83
>gi|328543359|ref|YP_004303468.1| 50S ribosomal protein L4 [Polymorphum gilvum SL003B-26A1]
gi|326413104|gb|ADZ70167.1| 50S ribosomal protein L4 [Polymorphum gilvum SL003B-26A1]
Length = 206
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 49/68 (72%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + ++ ++F + R D+IHRVVRWQLAKRQ GTH K SEVSGT KK RQKG+G AR
Sbjct: 14 GSITVSDEIFGLEPRTDLIHRVVRWQLAKRQAGTHKAKGRSEVSGTTKKFVRQKGSGGAR 73
Query: 172 HGTLRGPQ 179
HG + PQ
Sbjct: 74 HGNRKAPQ 81
>gi|379058899|ref|ZP_09849425.1| 50S ribosomal protein L4P [Serinicoccus profundi MCCC 1A05965]
Length = 216
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I +T D G + L ++FDV +IH+VV QLA +QGTHSTKT EV G G+K
Sbjct: 4 ITITKPAGGDAGTVDLPAELFDVQTNVPLIHQVVVAQLAAARQGTHSTKTRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G+ R PQ
Sbjct: 64 PYRQKGTGRARQGSTRAPQ 82
>gi|349699373|ref|ZP_08901002.1| 50S ribosomal protein L4 [Gluconacetobacter europaeus LMG 18494]
Length = 204
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 49/77 (63%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N G L ++F R DI+ RVV WQLAKR+ GTH K + E+SGT KKP+
Sbjct: 5 IKTLDNGSAGKASLPDEIFAATPRTDIMARVVHWQLAKRRAGTHKVKGMGEISGTTKKPY 64
Query: 163 RQKGTGRARHGTLRGPQ 179
RQKGTG AR G+LR PQ
Sbjct: 65 RQKGTGSARQGSLRSPQ 81
>gi|296447531|ref|ZP_06889453.1| ribosomal protein L4/L1e [Methylosinus trichosporium OB3b]
gi|296254919|gb|EFH02024.1| ribosomal protein L4/L1e [Methylosinus trichosporium OB3b]
Length = 206
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 59/81 (72%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I VT++ ++ G + LA ++F + R D+I R++RWQLAKR+ GTH+ K ++++ TG
Sbjct: 1 MQIGVTSYDGQEAGSIELADEIFGLEPRTDLIFRMIRWQLAKRRAGTHAVKNRADIARTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KK ++QKGTG ARHG+ R PQ
Sbjct: 61 KKMYKQKGTGGARHGSRRVPQ 81
>gi|187934984|ref|YP_001884474.1| 50S ribosomal protein L4 [Clostridium botulinum B str. Eklund 17B]
gi|188589298|ref|YP_001919673.1| 50S ribosomal protein L4 [Clostridium botulinum E3 str. Alaska E43]
gi|251779469|ref|ZP_04822389.1| 50S ribosomal protein L4 [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|226730642|sp|B2UYB1.1|RL4_CLOBA RecName: Full=50S ribosomal protein L4
gi|226730643|sp|B2TIH6.1|RL4_CLOBB RecName: Full=50S ribosomal protein L4
gi|187723137|gb|ACD24358.1| 50S ribosomal protein L4 [Clostridium botulinum B str. Eklund 17B]
gi|188499579|gb|ACD52715.1| 50S ribosomal protein L4 [Clostridium botulinum E3 str. Alaska E43]
gi|243083784|gb|EES49674.1| 50S ribosomal protein L4 [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 206
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G + L +VF+V + K +H+VV LA ++QGT S KT +EV G
Sbjct: 1 MPTVGLFNQEGKQVGDIQLNANVFEVEVNKHALHQVVVALLANKRQGTQSAKTRTEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
G KPWRQKGTGRAR G++R PQ W A KP
Sbjct: 61 GIKPWRQKGTGRARQGSIRAPQ-WIKGGIVFAPKP 94
>gi|376259803|ref|YP_005146523.1| 50S ribosomal protein L4 [Clostridium sp. BNL1100]
gi|373943797|gb|AEY64718.1| 50S ribosomal protein L4, bacterial/organelle [Clostridium sp.
BNL1100]
Length = 207
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + +N E G + L +VF + +++H VV QLA ++QGT STKT SEV G
Sbjct: 1 MPKVDLYNMKGEVVGDIQLCDNVFGAEVNNEVLHAVVVNQLANKRQGTQSTKTKSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
GKKPWRQKGTGRAR G++R Q
Sbjct: 61 GKKPWRQKGTGRARQGSIRSAQ 82
>gi|319404424|emb|CBI78027.1| 50S ribosomal protein L4 [Bartonella rochalimae ATCC BAA-1498]
Length = 206
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 64/98 (65%), Gaps = 5/98 (5%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + ++ G + ++ ++F + R+DI+ RVVRWQLA+RQ+GTH ++ S+VS T
Sbjct: 2 DLVIKTLD--GKEAGKLKVSENIFGLTPREDILQRVVRWQLARRQKGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
G K ++QKGTGRARH + R PQ + KA P +
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQ---FRGGGKAHGPVMR 94
>gi|153952862|ref|YP_001393627.1| 50S ribosomal protein L4 [Clostridium kluyveri DSM 555]
gi|219853527|ref|YP_002470649.1| hypothetical protein CKR_0184 [Clostridium kluyveri NBRC 12016]
gi|189029496|sp|A5N4P8.1|RL4_CLOK5 RecName: Full=50S ribosomal protein L4
gi|254803727|sp|B9DYB0.1|RL4_CLOK1 RecName: Full=50S ribosomal protein L4
gi|146345743|gb|EDK32279.1| RplD [Clostridium kluyveri DSM 555]
gi|219567251|dbj|BAH05235.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 206
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 71/123 (57%), Gaps = 17/123 (13%)
Query: 101 IPVTNFFNEDKGFMV---LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P+ FN++ + L+ VF V + + ++H+VV LA ++QGT S KT +EVSG
Sbjct: 1 MPIVGLFNKEGQKITDFELSDKVFGVEVNQYVMHQVVVALLANKRQGTQSAKTRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP-CYKVEQEGAAAWVEDCSICSSSRR 216
G KPWRQKGTGRAR G++R PQ W + A KP Y++ S+ S+RR
Sbjct: 61 GIKPWRQKGTGRARQGSIRSPQ-WIHGGVVFAVKPRSYRI------------SVPKSARR 107
Query: 217 KAL 219
A+
Sbjct: 108 LAM 110
>gi|383818613|ref|ZP_09973899.1| 50S ribosomal protein L4 [Mycobacterium phlei RIVM601174]
gi|383338469|gb|EID16833.1| 50S ribosomal protein L4 [Mycobacterium phlei RIVM601174]
Length = 217
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 53/81 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + G + L ++FDV ++H+VV QLA +QGTHSTKT EVSG G
Sbjct: 3 LKIDVHTPAGKKDGSVELPAELFDVEANIALMHQVVTAQLAAARQGTHSTKTRGEVSGGG 62
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KKP+RQKGTGRAR G+ R PQ
Sbjct: 63 KKPYRQKGTGRARQGSTRAPQ 83
>gi|396585500|ref|ZP_10485909.1| 50S ribosomal protein L4 [Actinomyces sp. ICM47]
gi|395546701|gb|EJG14285.1| 50S ribosomal protein L4 [Actinomyces sp. ICM47]
Length = 214
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 55/85 (64%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ D + V + + G +VL G FDVP ++H+VV QLA +QGTH+TKT +V
Sbjct: 1 MADDRNVDVIDLEGKKAGTVVLPGSTFDVPTNIPLMHQVVVAQLAAARQGTHATKTRGDV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
+G GKKP+RQKGTG AR G++R P
Sbjct: 61 AGGGKKPFRQKGTGNARQGSIRAPH 85
>gi|194246734|ref|YP_002004373.1| 50S ribosomal protein L4 [Candidatus Phytoplasma mali]
gi|254803748|sp|B3QZZ2.1|RL4_PHYMT RecName: Full=50S ribosomal protein L4
gi|193807091|emb|CAP18529.1| 50S ribosomal protein L4 [Candidatus Phytoplasma mali]
Length = 207
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Query: 101 IPVTNFFNEDKGFMV---LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P N N+ F+ L ++F + I K +++ VV Q A +QGTH+TK + VSG
Sbjct: 1 MPKYNLINQKGDFLSQIDLDDEIFGISINKQVLYDVVNAQRASMRQGTHATKNRALVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGP 178
GKKPWRQKGTGRARHGT+R P
Sbjct: 61 GKKPWRQKGTGRARHGTIRSP 81
>gi|57239335|ref|YP_180471.1| 50S ribosomal protein L4 [Ehrlichia ruminantium str. Welgevonden]
gi|58579301|ref|YP_197513.1| 50S ribosomal protein L4 [Ehrlichia ruminantium str. Welgevonden]
gi|81557285|sp|Q5HAS3.1|RL4_EHRRW RecName: Full=50S ribosomal protein L4
gi|57161414|emb|CAH58338.1| 50S ribosomal protein L4 [Ehrlichia ruminantium str. Welgevonden]
gi|58417927|emb|CAI27131.1| 50S ribosomal protein L4 [Ehrlichia ruminantium str. Welgevonden]
Length = 205
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 53/79 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N +++ G + L +F V R DI+ VV WQL+KR+ G H TKTI +VSGT K
Sbjct: 3 VNVINIESQNIGKIDLNPLIFSVNYRPDILKMVVEWQLSKRRIGAHKTKTIGDVSGTTAK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQK TGRAR G+LR PQ
Sbjct: 63 PYRQKHTGRARQGSLRSPQ 81
>gi|399035013|ref|ZP_10732567.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium sp. CF122]
gi|398067225|gb|EJL58764.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium sp. CF122]
Length = 206
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ +F + R+DI+ RV+RWQLAK+QQGTH K ++VS TG K +
Sbjct: 5 VKTLEGKDAGKVSLSDAIFGLEPREDILARVIRWQLAKKQQGTHQAKGRADVSRTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQGWYYNARSKAQKPCYKVEQE 199
+QKGTGRARH + R PQ + KA P + +
Sbjct: 65 KQKGTGRARHHSARAPQ---FRGGGKAHGPVARSHEH 98
>gi|296131837|ref|YP_003639084.1| 50S ribosomal protein L4 [Thermincola potens JR]
gi|296030415|gb|ADG81183.1| ribosomal protein L4/L1e [Thermincola potens JR]
Length = 206
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 53/78 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E G + L +VF + + ++H VV QLA R+ GT STKT +EVSG G+K
Sbjct: 4 VALYNIKGEQVGEIELKDEVFGIEPNEGLVHDVVVMQLANRRVGTASTKTRAEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRARHG++R P
Sbjct: 64 PWRQKGTGRARHGSIRSP 81
>gi|46579715|ref|YP_010523.1| 50S ribosomal protein L4 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120602808|ref|YP_967208.1| 50S ribosomal protein L4 [Desulfovibrio vulgaris DP4]
gi|387153062|ref|YP_005701998.1| 50S ribosomal protein L4 [Desulfovibrio vulgaris RCH1]
gi|81566853|sp|Q72CH9.1|RL4_DESVH RecName: Full=50S ribosomal protein L4
gi|166234662|sp|A1VEB5.1|RL4_DESVV RecName: Full=50S ribosomal protein L4
gi|46449130|gb|AAS95782.1| ribosomal protein L4 [Desulfovibrio vulgaris str. Hildenborough]
gi|120563037|gb|ABM28781.1| LSU ribosomal protein L4P [Desulfovibrio vulgaris DP4]
gi|311233506|gb|ADP86360.1| ribosomal protein L4/L1e [Desulfovibrio vulgaris RCH1]
Length = 206
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
V+ V + ++ G + LA +VF+V +R +I+H VVR Q A + GTH+TKT + VSG G
Sbjct: 3 VVKVYDQNKQEAGEITLAPEVFEVEVRPEILHLVVRAQRAAFRAGTHATKTRAFVSGGGL 62
Query: 160 KPWRQKGTGRARHGTLRGP 178
KPWRQKGTGRAR G++R P
Sbjct: 63 KPWRQKGTGRARAGSIRSP 81
>gi|403738730|ref|ZP_10951331.1| 50S ribosomal protein L4 [Austwickia chelonae NBRC 105200]
gi|403191380|dbj|GAB78101.1| 50S ribosomal protein L4 [Austwickia chelonae NBRC 105200]
Length = 218
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + N + G + L ++FDV +IH+VV QLA +QGTH+TKT EV G GKK
Sbjct: 4 IDILNAEGQKSGSIELPSELFDVQTNVPLIHQVVVAQLAAARQGTHATKTRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G+ R PQ
Sbjct: 64 PYRQKGTGRARQGSTRAPQ 82
>gi|303246994|ref|ZP_07333270.1| ribosomal protein L4/L1e [Desulfovibrio fructosovorans JJ]
gi|302491701|gb|EFL51584.1| ribosomal protein L4/L1e [Desulfovibrio fructosovorans JJ]
Length = 210
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 56/78 (71%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + ++ G + LA +VF+V ++ +++H VVR QLA ++ GTHS KT S VSG GKK
Sbjct: 4 VKVYDQGRQEIGDVELAPEVFEVEVQPELLHLVVRAQLAAKRAGTHSVKTRSTVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRAR G+ R P
Sbjct: 64 PWRQKGTGRARAGSTRSP 81
>gi|237786394|ref|YP_002907099.1| 50S ribosomal protein L4 [Corynebacterium kroppenstedtii DSM 44385]
gi|259491550|sp|C4LL51.1|RL4_CORK4 RecName: Full=50S ribosomal protein L4
gi|237759306|gb|ACR18556.1| 50S ribosomal protein L4 [Corynebacterium kroppenstedtii DSM 44385]
Length = 219
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V G + L VFDV + ++H+VV QLA R+QGTH+TKT +V G
Sbjct: 3 NLTLDVHTADGSTNGTVDLPSSVFDVEVSTPLLHQVVTAQLAARRQGTHATKTRGQVRGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KP+RQKGTGRAR G++R PQ
Sbjct: 63 GRKPYRQKGTGRARQGSIRAPQ 84
>gi|383312961|ref|YP_005365762.1| 50S ribosomal protein L4 [Candidatus Rickettsia amblyommii str.
GAT-30V]
gi|378931621|gb|AFC70130.1| 50S ribosomal protein L4 [Candidatus Rickettsia amblyommii str.
GAT-30V]
Length = 207
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + NE+ G + L D+F V IR+DII +V+ WQ AK G H TKT+SEV GT KKP
Sbjct: 5 ILSLANEEVGEISLNEDIFAVEFIREDIIKQVIDWQRAKAMSGNHKTKTVSEVLGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQ 179
++QKGTG AR G+LR Q
Sbjct: 65 FKQKGTGNARQGSLRSVQ 82
>gi|340625722|ref|YP_004744174.1| putative 50S ribosomal protein L4 RPLD [Mycobacterium canettii CIPT
140010059]
gi|433625795|ref|YP_007259424.1| Putative 50S ribosomal protein L4 RplD [Mycobacterium canettii CIPT
140060008]
gi|433629786|ref|YP_007263414.1| Putative 50S ribosomal protein L4 RplD [Mycobacterium canettii CIPT
140070010]
gi|433633735|ref|YP_007267362.1| Putative 50S ribosomal protein L4 RplD [Mycobacterium canettii CIPT
140070017]
gi|433640825|ref|YP_007286584.1| Putative 50S ribosomal protein L4 RplD [Mycobacterium canettii CIPT
140070008]
gi|340003912|emb|CCC43046.1| putative 50S ribosomal protein L4 RPLD [Mycobacterium canettii CIPT
140010059]
gi|432153401|emb|CCK50623.1| Putative 50S ribosomal protein L4 RplD [Mycobacterium canettii CIPT
140060008]
gi|432157373|emb|CCK54651.1| Putative 50S ribosomal protein L4 RplD [Mycobacterium canettii CIPT
140070008]
gi|432161379|emb|CCK58721.1| Putative 50S ribosomal protein L4 RplD [Mycobacterium canettii CIPT
140070010]
gi|432165328|emb|CCK62803.1| Putative 50S ribosomal protein L4 RplD [Mycobacterium canettii CIPT
140070017]
Length = 223
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 49/68 (72%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDVP ++H+VV Q A +QGTHSTKT EVSG G+KP+RQKGTGRAR
Sbjct: 22 GAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGGRKPYRQKGTGRAR 81
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 82 QGSTRAPQ 89
>gi|15607842|ref|NP_215216.1| 50S ribosomal protein L4 RplD [Mycobacterium tuberculosis H37Rv]
gi|15840109|ref|NP_335146.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis CDC1551]
gi|31791887|ref|NP_854380.1| 50S ribosomal protein L4 [Mycobacterium bovis AF2122/97]
gi|121636624|ref|YP_976847.1| 50S ribosomal protein L4 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148660477|ref|YP_001282000.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis H37Ra]
gi|148821907|ref|YP_001286661.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis F11]
gi|167967944|ref|ZP_02550221.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis H37Ra]
gi|224989096|ref|YP_002643783.1| 50S ribosomal protein L4 [Mycobacterium bovis BCG str. Tokyo 172]
gi|253797645|ref|YP_003030646.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis KZN 1435]
gi|254231022|ref|ZP_04924349.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis C]
gi|254363649|ref|ZP_04979695.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis str.
Haarlem]
gi|254549663|ref|ZP_05140110.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289442103|ref|ZP_06431847.1| LSU ribosomal protein L4/L1 [Mycobacterium tuberculosis T46]
gi|289446262|ref|ZP_06436006.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis CPHL_A]
gi|289568646|ref|ZP_06448873.1| ribosomal protein L4 [Mycobacterium tuberculosis T17]
gi|289573310|ref|ZP_06453537.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis K85]
gi|289744426|ref|ZP_06503804.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis 02_1987]
gi|289749209|ref|ZP_06508587.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis T92]
gi|289752749|ref|ZP_06512127.1| ribosomal protein L4 [Mycobacterium tuberculosis EAS054]
gi|289756790|ref|ZP_06516168.1| ribosomal protein L4 [Mycobacterium tuberculosis T85]
gi|289760829|ref|ZP_06520207.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis GM 1503]
gi|294996197|ref|ZP_06801888.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis 210]
gi|297633201|ref|ZP_06950981.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis KZN 4207]
gi|297730181|ref|ZP_06959299.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis KZN R506]
gi|298524193|ref|ZP_07011602.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis 94_M4241A]
gi|306774813|ref|ZP_07413150.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu001]
gi|306781455|ref|ZP_07419792.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu002]
gi|306783354|ref|ZP_07421676.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu003]
gi|306787723|ref|ZP_07426045.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu004]
gi|306794490|ref|ZP_07432792.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu005]
gi|306796456|ref|ZP_07434758.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu006]
gi|306802316|ref|ZP_07438984.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu008]
gi|306806526|ref|ZP_07443194.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu007]
gi|306966723|ref|ZP_07479384.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu009]
gi|306970915|ref|ZP_07483576.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu010]
gi|307078645|ref|ZP_07487815.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu011]
gi|307083209|ref|ZP_07492322.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu012]
gi|313657508|ref|ZP_07814388.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis KZN V2475]
gi|339630771|ref|YP_004722413.1| 50S ribosomal protein L4 [Mycobacterium africanum GM041182]
gi|375294921|ref|YP_005099188.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis KZN 4207]
gi|378770458|ref|YP_005170191.1| 50S ribosomal protein L4 [Mycobacterium bovis BCG str. Mexico]
gi|383306603|ref|YP_005359414.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis RGTB327]
gi|385990177|ref|YP_005908475.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis CCDC5180]
gi|385993777|ref|YP_005912075.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis CCDC5079]
gi|385997481|ref|YP_005915779.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis CTRI-2]
gi|386003734|ref|YP_005922013.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis RGTB423]
gi|392385422|ref|YP_005307051.1| rplD [Mycobacterium tuberculosis UT205]
gi|392431131|ref|YP_006472175.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis KZN 605]
gi|397672511|ref|YP_006514046.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis H37Rv]
gi|422811642|ref|ZP_16860043.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis CDC1551A]
gi|424805800|ref|ZP_18231231.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis W-148]
gi|424946471|ref|ZP_18362167.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis NCGM2209]
gi|449062724|ref|YP_007429807.1| 50S ribosomal protein L4 [Mycobacterium bovis BCG str. Korea 1168P]
gi|46397667|sp|P60728.1|RL4_MYCBO RecName: Full=50S ribosomal protein L4
gi|46397668|sp|P60729.1|RL4_MYCTU RecName: Full=50S ribosomal protein L4
gi|166234687|sp|A1KGI3.1|RL4_MYCBP RecName: Full=50S ribosomal protein L4
gi|166234691|sp|A5U088.1|RL4_MYCTA RecName: Full=50S ribosomal protein L4
gi|254803746|sp|C1AL36.1|RL4_MYCBT RecName: Full=50S ribosomal protein L4
gi|13880259|gb|AAK44960.1| ribosomal protein L4 [Mycobacterium tuberculosis CDC1551]
gi|31617474|emb|CAD93584.1| PROBABLE 50S RIBOSOMAL PROTEIN L4 RPLD [Mycobacterium bovis
AF2122/97]
gi|121492271|emb|CAL70738.1| Probable 50S ribosomal protein L4 rplD [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|124600081|gb|EAY59091.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis C]
gi|134149163|gb|EBA41208.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis str.
Haarlem]
gi|148504629|gb|ABQ72438.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis H37Ra]
gi|148720434|gb|ABR05059.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis F11]
gi|224772209|dbj|BAH25015.1| 50S ribosomal protein L4 [Mycobacterium bovis BCG str. Tokyo 172]
gi|253319148|gb|ACT23751.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis KZN 1435]
gi|289415022|gb|EFD12262.1| LSU ribosomal protein L4/L1 [Mycobacterium tuberculosis T46]
gi|289419220|gb|EFD16421.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis CPHL_A]
gi|289537741|gb|EFD42319.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis K85]
gi|289542400|gb|EFD46048.1| ribosomal protein L4 [Mycobacterium tuberculosis T17]
gi|289684954|gb|EFD52442.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis 02_1987]
gi|289689796|gb|EFD57225.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis T92]
gi|289693336|gb|EFD60765.1| ribosomal protein L4 [Mycobacterium tuberculosis EAS054]
gi|289708335|gb|EFD72351.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis GM 1503]
gi|289712354|gb|EFD76366.1| ribosomal protein L4 [Mycobacterium tuberculosis T85]
gi|298493987|gb|EFI29281.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis 94_M4241A]
gi|308216703|gb|EFO76102.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu001]
gi|308325755|gb|EFP14606.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu002]
gi|308331848|gb|EFP20699.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu003]
gi|308335635|gb|EFP24486.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu004]
gi|308337250|gb|EFP26101.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu005]
gi|308343116|gb|EFP31967.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu006]
gi|308347003|gb|EFP35854.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu007]
gi|308350982|gb|EFP39833.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu008]
gi|308355578|gb|EFP44429.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu009]
gi|308359536|gb|EFP48387.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu010]
gi|308363441|gb|EFP52292.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu011]
gi|308367079|gb|EFP55930.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu012]
gi|323720926|gb|EGB29992.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis CDC1551A]
gi|326905076|gb|EGE52009.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis W-148]
gi|328457426|gb|AEB02849.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis KZN 4207]
gi|339293731|gb|AEJ45842.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis CCDC5079]
gi|339297370|gb|AEJ49480.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis CCDC5180]
gi|339330127|emb|CCC25783.1| putative 50S ribosomal protein L4 RPLD [Mycobacterium africanum
GM041182]
gi|341600640|emb|CCC63310.1| probable 50S ribosomal protein L4 rplD [Mycobacterium bovis BCG
str. Moreau RDJ]
gi|344218527|gb|AEM99157.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis CTRI-2]
gi|356592779|gb|AET18008.1| 50S ribosomal protein L4 [Mycobacterium bovis BCG str. Mexico]
gi|358230986|dbj|GAA44478.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis NCGM2209]
gi|378543973|emb|CCE36245.1| rplD [Mycobacterium tuberculosis UT205]
gi|379026853|dbj|BAL64586.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis str. Erdman =
ATCC 35801]
gi|380720556|gb|AFE15665.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis RGTB327]
gi|380724222|gb|AFE12017.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis RGTB423]
gi|392052540|gb|AFM48098.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis KZN 605]
gi|395137416|gb|AFN48575.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis H37Rv]
gi|440580166|emb|CCG10569.1| putative 50S RIBOSOMAL protein L4 RPLD [Mycobacterium tuberculosis
7199-99]
gi|444894192|emb|CCP43446.1| 50S ribosomal protein L4 RplD [Mycobacterium tuberculosis H37Rv]
gi|449031232|gb|AGE66659.1| 50S ribosomal protein L4 [Mycobacterium bovis BCG str. Korea 1168P]
Length = 223
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 49/68 (72%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDVP ++H+VV Q A +QGTHSTKT EVSG G+KP+RQKGTGRAR
Sbjct: 22 GAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGGRKPYRQKGTGRAR 81
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 82 QGSTRAPQ 89
>gi|443673934|ref|ZP_21138980.1| 50S ribosomal protein L4 [Rhodococcus sp. AW25M09]
gi|443413534|emb|CCQ17318.1| 50S ribosomal protein L4 [Rhodococcus sp. AW25M09]
Length = 225
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 52/81 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V + G + L ++FD P ++H+VV QLA +QGTHSTKT EV G G
Sbjct: 12 LTLDVKEAGGKTNGTVDLPAEIFDAPANIALLHQVVIAQLAAARQGTHSTKTRGEVRGGG 71
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KKP+RQKGTGRAR G+ R PQ
Sbjct: 72 KKPYRQKGTGRARQGSTRAPQ 92
>gi|238650971|ref|YP_002916827.1| 50S ribosomal protein L4 [Rickettsia peacockii str. Rustic]
gi|379019482|ref|YP_005295716.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Hlp#2]
gi|259491568|sp|C4K2H8.1|RL4_RICPU RecName: Full=50S ribosomal protein L4
gi|238625069|gb|ACR47775.1| 50S ribosomal protein L4 [Rickettsia peacockii str. Rustic]
gi|376332062|gb|AFB29296.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Hlp#2]
Length = 207
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEV GT KKP
Sbjct: 5 ILSLANEEVGEISLNEDIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVLGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQ----GWYYN--ARSKAQKPCYKVEQEGAA-AWVEDCS 209
++QKGTG AR G+LR Q G + RS A K KV + G A E C+
Sbjct: 65 FKQKGTGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKCA 119
>gi|423712871|ref|ZP_17687169.1| 50S ribosomal protein L4 [Bartonella washoensis Sb944nv]
gi|395410567|gb|EJF77121.1| 50S ribosomal protein L4 [Bartonella washoensis Sb944nv]
Length = 206
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLV V + G + ++ VF + R+DI+ RVVRWQLA+RQQGTH ++ S+VS T
Sbjct: 2 DLV--VKTLEGNEAGKLKVSEGVFGLVPREDILQRVVRWQLARRQQGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
G K ++QKGTGRARH + R PQ + KA P +
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQ---FRGGGKAHGPVVR 94
>gi|15892928|ref|NP_360642.1| 50S ribosomal protein L4 [Rickettsia conorii str. Malish 7]
gi|34581370|ref|ZP_00142850.1| 50S ribosomal protein L4 [Rickettsia sibirica 246]
gi|374319602|ref|YP_005066101.1| 50S ribosomal protein L4 [Rickettsia slovaca 13-B]
gi|383484334|ref|YP_005393247.1| 50S ribosomal protein L4 [Rickettsia parkeri str. Portsmouth]
gi|383751644|ref|YP_005426745.1| 50S ribosomal protein L4 [Rickettsia slovaca str. D-CWPP]
gi|46577283|sp|Q92GW7.1|RL4_RICCN RecName: Full=50S ribosomal protein L4
gi|15620120|gb|AAL03543.1| 50S ribosomal protein L4 [Rickettsia conorii str. Malish 7]
gi|28262755|gb|EAA26259.1| 50S ribosomal protein L4 [Rickettsia sibirica 246]
gi|360042151|gb|AEV92533.1| 50S ribosomal protein L4 [Rickettsia slovaca 13-B]
gi|378936688|gb|AFC75188.1| 50S ribosomal protein L4 [Rickettsia parkeri str. Portsmouth]
gi|379774658|gb|AFD20014.1| 50S ribosomal protein L4 [Rickettsia slovaca str. D-CWPP]
Length = 207
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEV GT KKP
Sbjct: 5 ILSLANEEVGEISLNEDIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVLGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQ----GWYYN--ARSKAQKPCYKVEQEGAA-AWVEDCS 209
++QKGTG AR G+LR Q G + RS A K KV + G A E C+
Sbjct: 65 FKQKGTGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKCA 119
>gi|341584193|ref|YP_004764684.1| 50S ribosomal protein L4 [Rickettsia heilongjiangensis 054]
gi|350273786|ref|YP_004885099.1| 50S ribosomal protein L4 [Rickettsia japonica YH]
gi|340808418|gb|AEK75006.1| 50S ribosomal protein L4 [Rickettsia heilongjiangensis 054]
gi|348592999|dbj|BAK96960.1| 50S ribosomal protein L4 [Rickettsia japonica YH]
Length = 207
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEV GT KKP
Sbjct: 5 ILSLANEEVGEISLNEDIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVLGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQ----GWYYN--ARSKAQKPCYKVEQEGAA-AWVEDCS 209
++QKGTG AR G+LR Q G + RS A K KV + G A E C+
Sbjct: 65 FKQKGTGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKCA 119
>gi|157828859|ref|YP_001495101.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933586|ref|YP_001650375.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Iowa]
gi|378721682|ref|YP_005286569.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Colombia]
gi|378723029|ref|YP_005287915.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Arizona]
gi|378724383|ref|YP_005289267.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Hauke]
gi|379016071|ref|YP_005292306.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Brazil]
gi|379018168|ref|YP_005294403.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Hino]
gi|166199858|sp|A8GT68.1|RL4_RICRS RecName: Full=50S ribosomal protein L4
gi|189042881|sp|B0BUQ9.1|RL4_RICRO RecName: Full=50S ribosomal protein L4
gi|157801340|gb|ABV76593.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908673|gb|ABY72969.1| LSU ribosomal protein L1E (= L4P) [Rickettsia rickettsii str. Iowa]
gi|376324595|gb|AFB21835.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Brazil]
gi|376326706|gb|AFB23945.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Colombia]
gi|376328053|gb|AFB25291.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Arizona]
gi|376330734|gb|AFB27970.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Hino]
gi|376333398|gb|AFB30631.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Hauke]
Length = 207
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEV GT KKP
Sbjct: 5 ILSLANEEVGEISLNEDIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVLGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQ----GWYYN--ARSKAQKPCYKVEQEGAA-AWVEDCS 209
++QKGTG AR G+LR Q G + RS A K KV + G A E C+
Sbjct: 65 FKQKGTGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKCA 119
>gi|395779755|ref|ZP_10460224.1| 50S ribosomal protein L4 [Bartonella washoensis 085-0475]
gi|395420130|gb|EJF86415.1| 50S ribosomal protein L4 [Bartonella washoensis 085-0475]
Length = 206
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLV V + G + ++ VF + R+DI+ RVVRWQLA+RQQGTH ++ S+VS T
Sbjct: 2 DLV--VKTLEGNEAGKLKVSEGVFGLVPREDILQRVVRWQLARRQQGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
G K ++QKGTGRARH + R PQ + KA P +
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQ---FRGGGKAHGPVVR 94
>gi|78357299|ref|YP_388748.1| 50S ribosomal protein L4 [Desulfovibrio alaskensis G20]
gi|109893592|sp|Q30Z43.1|RL4_DESDG RecName: Full=50S ribosomal protein L4
gi|78219704|gb|ABB39053.1| ribosomal protein L4/L1e [Desulfovibrio alaskensis G20]
Length = 206
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 56/81 (69%), Gaps = 3/81 (3%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+ V +++DK G + LA +VF+V +R +I++ VVR Q A ++ GTHS KT S +SG
Sbjct: 1 MAVVKVYDQDKKETGELTLAPEVFEVEVRPEILNLVVRAQRAAKRAGTHSVKTRSTISGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGP 178
G KPWRQKGTGRAR G+ R P
Sbjct: 61 GAKPWRQKGTGRARSGSNRSP 81
>gi|379712749|ref|YP_005301088.1| 50S ribosomal protein L4 [Rickettsia philipii str. 364D]
gi|376329394|gb|AFB26631.1| 50S ribosomal protein L4 [Rickettsia philipii str. 364D]
Length = 207
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEV GT KKP
Sbjct: 5 ILSLANEEVGEISLNEDIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVLGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQ----GWYYN--ARSKAQKPCYKVEQEGAA-AWVEDCS 209
++QKGTG AR G+LR Q G + RS A K KV + G A E C+
Sbjct: 65 FKQKGTGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKCA 119
>gi|225020387|ref|ZP_03709579.1| hypothetical protein CORMATOL_00394 [Corynebacterium matruchotii
ATCC 33806]
gi|305679737|ref|ZP_07402547.1| 50S ribosomal protein L4 [Corynebacterium matruchotii ATCC 14266]
gi|224946776|gb|EEG27985.1| hypothetical protein CORMATOL_00394 [Corynebacterium matruchotii
ATCC 33806]
gi|305660357|gb|EFM49854.1| 50S ribosomal protein L4 [Corynebacterium matruchotii ATCC 14266]
Length = 216
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V G + L ++FD + ++H+VV QLA R+QGTHSTKT EV G G
Sbjct: 4 LTLDVQTAAGSTAGQVELPAEIFDREVSISLLHQVVNAQLAARRQGTHSTKTRGEVRGGG 63
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KKP+RQKGTGRAR G++R P
Sbjct: 64 KKPFRQKGTGRARQGSIRAPH 84
>gi|392414830|ref|YP_006451435.1| LSU ribosomal protein L4P [Mycobacterium chubuense NBB4]
gi|390614606|gb|AFM15756.1| LSU ribosomal protein L4P [Mycobacterium chubuense NBB4]
Length = 232
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 50/68 (73%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDV ++H+VV QLA ++QGTH+TKT EVSG GKKP+RQKGTGRAR
Sbjct: 16 GSIELPAELFDVEPNIALMHQVVTAQLAAKRQGTHATKTRGEVSGGGKKPYRQKGTGRAR 75
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 76 QGSTRAPQ 83
>gi|328953157|ref|YP_004370491.1| 50S ribosomal protein L4/L1e [Desulfobacca acetoxidans DSM 11109]
gi|328453481|gb|AEB09310.1| ribosomal protein L4/L1e [Desulfobacca acetoxidans DSM 11109]
Length = 207
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 66/107 (61%), Gaps = 9/107 (8%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+PV + ++ D+ G + L D+F++P++ I+H VV QLA R+ GT STK SEV G
Sbjct: 1 MPVIDVYDIDRNKVGEVSLRDDIFNIPVQGHILHEVVTMQLACRRAGTASTKGRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ----GWYY--NARSKAQKPCYKVEQ 198
G KPWRQKGTGRAR G++R P G + RS A KP KV +
Sbjct: 61 GHKPWRQKGTGRARVGSIRSPLWRGGGVVFGPKPRSYAYKPPKKVRR 107
>gi|395790887|ref|ZP_10470346.1| 50S ribosomal protein L4 [Bartonella alsatica IBS 382]
gi|395409183|gb|EJF75782.1| 50S ribosomal protein L4 [Bartonella alsatica IBS 382]
Length = 206
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + ++ G + ++ +F + R+DI+ RVVRWQLA RQQGTH ++ S+VS T
Sbjct: 2 DLVIKTLD--GDEAGKLKVSDAIFGLVPREDILQRVVRWQLAHRQQGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
G K ++QKGTGRARH + R PQ + KA P +
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQ---FRGGGKAHGPVVR 94
>gi|359791889|ref|ZP_09294722.1| 50S ribosomal protein L4, partial [Mesorhizobium alhagi CCNWXJ12-2]
gi|359252045|gb|EHK55342.1| 50S ribosomal protein L4, partial [Mesorhizobium alhagi CCNWXJ12-2]
Length = 80
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 56/80 (70%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + ++ ED G + L+ ++F + R+DI+ RVVRWQLAK+QQGTH TK +E++ TG
Sbjct: 1 MDLKISTLGGEDAGKVKLSEEIFGLDPREDILQRVVRWQLAKKQQGTHKTKGRAEIARTG 60
Query: 159 KKPWRQKGTGRARHGTLRGP 178
K ++QKGTGRARH + P
Sbjct: 61 AKMYKQKGTGRARHHSAPAP 80
>gi|449018858|dbj|BAM82260.1| mitochondrial ribosomal protein L4 precursor [Cyanidioschyzon
merolae strain 10D]
Length = 471
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 51/71 (71%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
E F ++ + D P R D+IHRVV +Q A +++GT TKT +EVSG+G+KPW QKGTG
Sbjct: 145 EPSCFASVSRALLDAPFRPDVIHRVVLYQRAAQRRGTAHTKTRAEVSGSGRKPWAQKGTG 204
Query: 169 RARHGTLRGPQ 179
RAR G+LR PQ
Sbjct: 205 RARAGSLRAPQ 215
>gi|304315941|ref|YP_003851086.1| 50S ribosomal protein L4/L1e [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777443|gb|ADL68002.1| ribosomal protein L4/L1e [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 206
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G M L+ +VF V + ++H VV LA ++QGTHSTK EV G G K
Sbjct: 4 VAVYNINGEQIGEMELSDNVFGVEVNVPVMHEVVLNYLASQRQGTHSTKRRGEVRGGGIK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G++R PQ
Sbjct: 64 PWRQKGTGRARQGSIRAPQ 82
>gi|2113867|emb|CAA73673.1| rplD [Mycobacterium bovis BCG]
Length = 223
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 49/68 (72%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDVP ++H+VV Q A +QGTHSTKT EVSG G+KP+RQKGTGRAR
Sbjct: 22 GAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGGRKPYRQKGTGRAR 81
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 82 QGSTRAPQ 89
>gi|365827619|ref|ZP_09369470.1| 50S ribosomal protein L4/L1 [Actinomyces sp. oral taxon 849 str.
F0330]
gi|400294445|ref|ZP_10796230.1| 50S ribosomal protein L4 [Actinomyces naeslundii str. Howell 279]
gi|365264888|gb|EHM94674.1| 50S ribosomal protein L4/L1 [Actinomyces sp. oral taxon 849 str.
F0330]
gi|399900448|gb|EJN83418.1| 50S ribosomal protein L4 [Actinomyces naeslundii str. Howell 279]
Length = 214
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 56/85 (65%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ + L + V + + G + L +VFD P+ ++H+VV QLA +QGTH+TKT +V
Sbjct: 1 MTEALTVDVVDSAGKKTGSVELPAEVFDAPLNIPLMHQVVVGQLAAARQGTHATKTRGDV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
G G+KP+RQKGTGRAR G+ R PQ
Sbjct: 61 RGGGRKPYRQKGTGRARQGSTRAPQ 85
>gi|403388277|ref|ZP_10930334.1| 50S ribosomal protein L4 [Clostridium sp. JC122]
Length = 206
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 68/123 (55%), Gaps = 17/123 (13%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G + L +F I K+ +H+VV QLA ++QGT S KT +EV G
Sbjct: 1 MPTIKVFNKEGKEVGDIQLNESIFGAEISKESMHQVVLAQLANKRQGTQSAKTRAEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP-CYKVEQEGAAAWVEDCSICSSSRR 216
G KPWRQKGTGRAR G++R PQ W + A KP Y+V SI S RR
Sbjct: 61 GIKPWRQKGTGRARQGSIRAPQ-WIHGGIVFAPKPRDYRV------------SIPKSMRR 107
Query: 217 KAL 219
A+
Sbjct: 108 TAM 110
>gi|440226338|ref|YP_007333429.1| 50S ribosomal protein L4/L1 [Rhizobium tropici CIAT 899]
gi|440037849|gb|AGB70883.1| 50S ribosomal protein L4/L1 [Rhizobium tropici CIAT 899]
Length = 206
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ +F + R+DI+ RVVRWQLAK+QQGTH K ++V+ TG K +
Sbjct: 5 VKTLEGKDAGKVSLSDAIFGLEPREDILARVVRWQLAKKQQGTHQAKGRADVARTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
+QKGTGRARH + R PQ + KA P +
Sbjct: 65 KQKGTGRARHHSARAPQ---FRGGGKAHGPVAR 94
>gi|227487122|ref|ZP_03917438.1| 50S ribosomal protein L4 [Corynebacterium glucuronolyticum ATCC
51867]
gi|227092780|gb|EEI28092.1| 50S ribosomal protein L4 [Corynebacterium glucuronolyticum ATCC
51867]
Length = 226
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 55/82 (67%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+LV+ V + G + L ++FD + ++H+VV QLA +QGTHSTKT EVSG
Sbjct: 3 NLVLDVHTADGKTDGTVELPAELFDRKVSVALLHQVVNAQLAGARQGTHSTKTRGEVSGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
GKKP+RQKGTGRAR G++R P
Sbjct: 63 GKKPFRQKGTGRARQGSIRAPH 84
>gi|209884814|ref|YP_002288671.1| 50S ribosomal protein L4 [Oligotropha carboxidovorans OM5]
gi|337741542|ref|YP_004633270.1| 50S ribosomal protein L4 [Oligotropha carboxidovorans OM5]
gi|386030558|ref|YP_005951333.1| 50S ribosomal protein L4 [Oligotropha carboxidovorans OM4]
gi|226730700|sp|B6JET4.1|RL4_OLICO RecName: Full=50S ribosomal protein L4
gi|209873010|gb|ACI92806.1| ribosomal protein L4/L1 family [Oligotropha carboxidovorans OM5]
gi|336095626|gb|AEI03452.1| 50S ribosomal protein L4 [Oligotropha carboxidovorans OM4]
gi|336099206|gb|AEI07029.1| 50S ribosomal protein L4 [Oligotropha carboxidovorans OM5]
Length = 206
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 53/79 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ VT + G + L+ +F + R DII RVV WQLAKRQ GTH TK +E++ TGKK
Sbjct: 3 LNVTTLEGKAAGSVNLSDTIFGLEPRTDIIQRVVNWQLAKRQAGTHKTKGRAEIARTGKK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
++QKGTG ARHG+ R PQ
Sbjct: 63 MYKQKGTGGARHGSARVPQ 81
>gi|383829116|ref|ZP_09984205.1| 50S ribosomal protein L4, bacterial/organelle [Saccharomonospora
xinjiangensis XJ-54]
gi|383461769|gb|EID53859.1| 50S ribosomal protein L4, bacterial/organelle [Saccharomonospora
xinjiangensis XJ-54]
Length = 226
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
E KG + L ++FDV ++H+VV QLA +QGTH TKT EV G G+KP+RQKGTG
Sbjct: 13 ESKGTVELPAEIFDVQANIPLMHQVVVAQLAAARQGTHDTKTRGEVRGGGRKPYRQKGTG 72
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 73 RARQGSVRAPQ 83
>gi|326773964|ref|ZP_08233246.1| ribosomal protein L4/L1 family protein [Actinomyces viscosus C505]
gi|326636103|gb|EGE37007.1| ribosomal protein L4/L1 family protein [Actinomyces viscosus C505]
Length = 214
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 56/85 (65%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ + L + V + + G + L +VFD P+ ++H+VV QLA +QGTH+TKT +V
Sbjct: 1 MTEALTVDVVDSAGKKTGSVELPAEVFDAPLNIPLMHQVVVGQLAAARQGTHATKTRGDV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
G G+KP+RQKGTGRAR G+ R PQ
Sbjct: 61 RGGGRKPYRQKGTGRARQGSTRAPQ 85
>gi|170759420|ref|YP_001788820.1| 50S ribosomal protein L4 [Clostridium botulinum A3 str. Loch Maree]
gi|226730645|sp|B1KSM4.1|RL4_CLOBM RecName: Full=50S ribosomal protein L4
gi|169406409|gb|ACA54820.1| 50S ribosomal protein L4 [Clostridium botulinum A3 str. Loch Maree]
Length = 206
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 104 TNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ FN E G + LA VF V + +H+VV+ LA ++QGT S KT +EVSG G K
Sbjct: 4 VDLFNQNGEKVGDLQLADSVFGVEVNTYAMHQVVKALLANKRQGTQSAKTRAEVSGGGIK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PWRQKGTGRAR G++R PQ W + A KP
Sbjct: 64 PWRQKGTGRARQGSIRAPQ-WIHGGIVFAPKP 94
>gi|227541711|ref|ZP_03971760.1| 50S ribosomal protein L4 [Corynebacterium glucuronolyticum ATCC
51866]
gi|227182526|gb|EEI63498.1| 50S ribosomal protein L4 [Corynebacterium glucuronolyticum ATCC
51866]
Length = 226
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 55/82 (67%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+LV+ V + G + L ++FD + ++H+VV QLA +QGTHSTKT EVSG
Sbjct: 3 NLVLDVHTADGKTDGTVELPAELFDRKVSVALLHQVVNAQLAGARQGTHSTKTRGEVSGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
GKKP+RQKGTGRAR G++R P
Sbjct: 63 GKKPFRQKGTGRARQGSIRAPH 84
>gi|302869971|ref|YP_003838608.1| 50S ribosomal protein L4/L1e [Micromonospora aurantiaca ATCC 27029]
gi|315501432|ref|YP_004080319.1| 50S ribosomal protein L4/l1e [Micromonospora sp. L5]
gi|302572830|gb|ADL49032.1| ribosomal protein L4/L1e [Micromonospora aurantiaca ATCC 27029]
gi|315408051|gb|ADU06168.1| ribosomal protein L4/L1e [Micromonospora sp. L5]
Length = 221
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L D+FD ++H+VV QLA +QGTH TKT EVSG GKK
Sbjct: 4 VDVINVEGAKSGSVELPADIFDAQANIALMHQVVVAQLAAARQGTHKTKTRGEVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P++QKGTGRAR G+ R PQ
Sbjct: 64 PYKQKGTGRARQGSTRAPQ 82
>gi|421858368|ref|ZP_16290638.1| ribosomal protein L4 [Paenibacillus popilliae ATCC 14706]
gi|410832047|dbj|GAC41075.1| ribosomal protein L4 [Paenibacillus popilliae ATCC 14706]
Length = 207
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + LA VF + K ++H V QLA +QGTH KT SEVSG G+K
Sbjct: 4 VAVYNISGAQVGEIELADTVFGIEPNKHVLHDAVVMQLASMRQGTHKVKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PW+QKGTGRAR G++R PQ
Sbjct: 64 PWKQKGTGRARQGSIRSPQ 82
>gi|167759861|ref|ZP_02431988.1| hypothetical protein CLOSCI_02224 [Clostridium scindens ATCC 35704]
gi|336421094|ref|ZP_08601254.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 5_1_57FAA]
gi|167662480|gb|EDS06610.1| 50S ribosomal protein L4 [Clostridium scindens ATCC 35704]
gi|336002453|gb|EGN32562.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 5_1_57FAA]
Length = 206
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G M L+ VF V I + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVGTMDLSDAVFGVEINEHLLHMAVVNQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRAPQ 82
>gi|319407425|emb|CBI81076.1| 50S ribosomal protein L4 [Bartonella sp. 1-1C]
Length = 206
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 64/98 (65%), Gaps = 5/98 (5%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DL+I + ++ G + ++ ++F + R+DI+ RVVRWQLA+RQ+GTH ++ S+VS T
Sbjct: 2 DLIIKTLD--GKEAGKLKVSENIFGLTPREDILQRVVRWQLARRQKGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
G K ++QKGTGRARH + R PQ + KA P +
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQ---FRGGGKAHGPVIR 94
>gi|357419487|ref|YP_004932479.1| 50S ribosomal protein L4 [Thermovirga lienii DSM 17291]
gi|355396953|gb|AER66382.1| LSU ribosomal protein L4P [Thermovirga lienii DSM 17291]
Length = 208
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 50/78 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G L+ VF P+ +H+VV QLA R+QGTHSTK+ EV G G+K
Sbjct: 4 VKVVNLKGEIVGEQQLSDAVFSAPVHVPAMHQVVVAQLANRRQGTHSTKSRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQK TGRARHG+ R P
Sbjct: 64 PWRQKHTGRARHGSRRSP 81
>gi|329945685|ref|ZP_08293415.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 170 str.
F0386]
gi|343521953|ref|ZP_08758919.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 175 str.
F0384]
gi|328528493|gb|EGF55467.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 170 str.
F0386]
gi|343401362|gb|EGV13868.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 175 str.
F0384]
Length = 214
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 56/85 (65%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ + L + V + + G + L +VFD P+ ++H+VV QLA +QGTH+TKT +V
Sbjct: 1 MTEALTVDVVDSAGKKTGSVELPAEVFDAPLNIPLMHQVVVGQLAAARQGTHATKTRGDV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
G G+KP+RQKGTGRAR G+ R PQ
Sbjct: 61 RGGGRKPYRQKGTGRARQGSTRAPQ 85
>gi|153812866|ref|ZP_01965534.1| hypothetical protein RUMOBE_03273 [Ruminococcus obeum ATCC 29174]
gi|149831078|gb|EDM86167.1| 50S ribosomal protein L4 [Ruminococcus obeum ATCC 29174]
Length = 206
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G M L VF V I + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VTVYNMEGNEVGTMELNDAVFGVEINEHLVHLAVVRQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G++R PQ
Sbjct: 64 PWRQKGTGHARQGSIRAPQ 82
>gi|295109478|emb|CBL23431.1| LSU ribosomal protein L4P [Ruminococcus obeum A2-162]
Length = 206
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G M L VF V I + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VTVYNMEGNEVGTMELNDAVFGVEINEHLVHLAVVRQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G++R PQ
Sbjct: 64 PWRQKGTGHARQGSIRAPQ 82
>gi|229587008|ref|YP_002845509.1| 50S ribosomal protein L4 [Rickettsia africae ESF-5]
gi|259491567|sp|C3PPA6.1|RL4_RICAE RecName: Full=50S ribosomal protein L4
gi|228022058|gb|ACP53766.1| 50S ribosomal protein L4 [Rickettsia africae ESF-5]
Length = 207
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 64/110 (58%), Gaps = 8/110 (7%)
Query: 108 NEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKG 166
NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEV GT KKP++QKG
Sbjct: 10 NEEVGEISLNEDIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVLGTTKKPFKQKG 69
Query: 167 TGRARHGTLRGPQ----GWYYN--ARSKAQKPCYKVEQEGAA-AWVEDCS 209
TG AR G+LR Q G + RS A K KV + G A E C+
Sbjct: 70 TGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKCA 119
>gi|374603260|ref|ZP_09676242.1| 50S ribosomal protein L4 [Paenibacillus dendritiformis C454]
gi|374391129|gb|EHQ62469.1| 50S ribosomal protein L4 [Paenibacillus dendritiformis C454]
Length = 207
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + LA VF + K ++H V QLA +QGTH KT SEVSG G+K
Sbjct: 4 VAVYNISGAQVGEIELADTVFGIEPNKHVLHDAVVMQLASMRQGTHKVKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PW+QKGTGRAR G++R PQ
Sbjct: 64 PWKQKGTGRARQGSIRSPQ 82
>gi|336116749|ref|YP_004571516.1| 50S ribosomal protein L4 [Microlunatus phosphovorus NM-1]
gi|334684528|dbj|BAK34113.1| 50S ribosomal protein L4 [Microlunatus phosphovorus NM-1]
Length = 235
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V + G + L D+FDV +IH+VV QLA +QGTH+ KT SEV+G G K
Sbjct: 7 IDVIDADGGTSGSVELPADLFDVNANIPLIHQVVVAQLAAARQGTHAVKTRSEVAGGGAK 66
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G++R PQ
Sbjct: 67 PYRQKGTGRARQGSIRAPQ 85
>gi|410464304|ref|ZP_11317750.1| 50S ribosomal protein L4, bacterial/organelle [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409982555|gb|EKO38998.1| 50S ribosomal protein L4, bacterial/organelle [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 210
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 104 TNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
FN+ + G + LA +VF+V ++ +++H VVR QLA ++ GTHS KT + VSG GKK
Sbjct: 4 VKLFNQGCQEIGTVDLAPEVFEVEVQPELLHLVVRAQLAAKRAGTHSVKTRAYVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRAR G+ R P
Sbjct: 64 PWRQKGTGRARAGSTRSP 81
>gi|73667227|ref|YP_303243.1| 50S ribosomal protein L4 [Ehrlichia canis str. Jake]
gi|109893593|sp|Q3YRL0.1|RL4_EHRCJ RecName: Full=50S ribosomal protein L4
gi|72394368|gb|AAZ68645.1| LSU ribosomal protein L4P [Ehrlichia canis str. Jake]
Length = 205
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N ++ G + L +F V R DI+ VV WQL+KR+ GTH KTI ++SGT K
Sbjct: 3 VSIINVNSDKIGTIDLNPLIFSVDYRPDILKMVVNWQLSKRRAGTHKAKTIGDISGTTAK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQK TGRAR G+LR PQ
Sbjct: 63 PYRQKHTGRARQGSLRSPQ 81
>gi|294852569|ref|ZP_06793242.1| 50S ribosomal protein L4/L1 [Brucella sp. NVSL 07-0026]
gi|294821158|gb|EFG38157.1| 50S ribosomal protein L4/L1 [Brucella sp. NVSL 07-0026]
Length = 206
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 53/79 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L ++F + R DI+ RVVRWQLA+RQQG+H + +VS TG K
Sbjct: 3 LTITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTGSK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
++QKGTGRARH + R PQ
Sbjct: 63 MYKQKGTGRARHHSARAPQ 81
>gi|289423702|ref|ZP_06425501.1| ribosomal protein, L4/L1 family [Peptostreptococcus anaerobius
653-L]
gi|429727971|ref|ZP_19262717.1| 50S ribosomal protein L4 [Peptostreptococcus anaerobius VPI 4330]
gi|289155952|gb|EFD04618.1| ribosomal protein, L4/L1 family [Peptostreptococcus anaerobius
653-L]
gi|429150828|gb|EKX93722.1| 50S ribosomal protein L4 [Peptostreptococcus anaerobius VPI 4330]
Length = 207
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N ++ G + L +FD+ + + +++ V+ QLA ++QGT S KT +EV G G+K
Sbjct: 4 INVLNVSGQNVGEIELNDSIFDIEVNEHVLYEAVKCQLANKRQGTQSAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PWRQKGTGRAR G++R Q W + A KP
Sbjct: 64 PWRQKGTGRARQGSIRSVQ-WVGGGVAFAPKP 94
>gi|220930966|ref|YP_002507874.1| 50S ribosomal protein L4 [Halothermothrix orenii H 168]
gi|254803739|sp|B8D0C5.1|RL4_HALOH RecName: Full=50S ribosomal protein L4
gi|219992276|gb|ACL68879.1| ribosomal protein L4/L1e [Halothermothrix orenii H 168]
Length = 209
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 51/67 (76%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + LA +VF+ + + ++H+VV QLA ++GT STKT EVSG G+KPWRQKGTGRAR
Sbjct: 15 GDIDLADNVFNEEVNEHVVHQVVTAQLATMRRGTASTKTRGEVSGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGP 178
HG++R P
Sbjct: 75 HGSIRSP 81
>gi|239832121|ref|ZP_04680450.1| 50S ribosomal protein L4 [Ochrobactrum intermedium LMG 3301]
gi|444310461|ref|ZP_21146083.1| 50S ribosomal protein L4 [Ochrobactrum intermedium M86]
gi|239824388|gb|EEQ95956.1| 50S ribosomal protein L4 [Ochrobactrum intermedium LMG 3301]
gi|443486269|gb|ELT49049.1| 50S ribosomal protein L4 [Ochrobactrum intermedium M86]
Length = 206
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 53/79 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L ++F + R DI+ RVVRWQLA+RQQG+H + +VS TG K
Sbjct: 3 LTITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
++QKGTGRARH + R PQ
Sbjct: 63 MYKQKGTGRARHHSARAPQ 81
>gi|23502109|ref|NP_698236.1| 50S ribosomal protein L4 [Brucella suis 1330]
gi|62290143|ref|YP_221936.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. 9-941]
gi|82700066|ref|YP_414640.1| 50S ribosomal protein L4 [Brucella melitensis biovar Abortus 2308]
gi|148559402|ref|YP_001259152.1| 50S ribosomal protein L4 [Brucella ovis ATCC 25840]
gi|161619188|ref|YP_001593075.1| 50S ribosomal protein L4 [Brucella canis ATCC 23365]
gi|163843498|ref|YP_001627902.1| 50S ribosomal protein L4 [Brucella suis ATCC 23445]
gi|189024381|ref|YP_001935149.1| 50S ribosomal protein L4 [Brucella abortus S19]
gi|225627702|ref|ZP_03785739.1| 50S ribosomal protein L4 [Brucella ceti str. Cudo]
gi|225852729|ref|YP_002732962.1| 50S ribosomal protein L4 [Brucella melitensis ATCC 23457]
gi|237815651|ref|ZP_04594648.1| 50S ribosomal protein L4 [Brucella abortus str. 2308 A]
gi|256263781|ref|ZP_05466313.1| ribosomal protein L4 [Brucella melitensis bv. 2 str. 63/9]
gi|260546691|ref|ZP_05822430.1| ribosomal protein L4 [Brucella abortus NCTC 8038]
gi|260565516|ref|ZP_05836000.1| ribosomal protein L4/L1e [Brucella melitensis bv. 1 str. 16M]
gi|260566239|ref|ZP_05836709.1| ribosomal protein L4/L1e [Brucella suis bv. 4 str. 40]
gi|260754975|ref|ZP_05867323.1| ribosomal protein L4 [Brucella abortus bv. 6 str. 870]
gi|260758191|ref|ZP_05870539.1| ribosomal protein L4 [Brucella abortus bv. 4 str. 292]
gi|260762017|ref|ZP_05874360.1| ribosomal protein L4 [Brucella abortus bv. 2 str. 86/8/59]
gi|260883984|ref|ZP_05895598.1| ribosomal protein L4 [Brucella abortus bv. 9 str. C68]
gi|261214229|ref|ZP_05928510.1| ribosomal protein L4 [Brucella abortus bv. 3 str. Tulya]
gi|261219580|ref|ZP_05933861.1| ribosomal protein L4 [Brucella ceti M13/05/1]
gi|261314047|ref|ZP_05953244.1| ribosomal protein L4 [Brucella pinnipedialis M163/99/10]
gi|261317866|ref|ZP_05957063.1| ribosomal protein L4 [Brucella pinnipedialis B2/94]
gi|261322075|ref|ZP_05961272.1| ribosomal protein L4 [Brucella ceti M644/93/1]
gi|261325319|ref|ZP_05964516.1| ribosomal protein L4 [Brucella neotomae 5K33]
gi|261752541|ref|ZP_05996250.1| ribosomal protein L4 [Brucella suis bv. 5 str. 513]
gi|261755200|ref|ZP_05998909.1| ribosomal protein L4 [Brucella suis bv. 3 str. 686]
gi|261758424|ref|ZP_06002133.1| ribosomal protein L4 [Brucella sp. F5/99]
gi|265988895|ref|ZP_06101452.1| ribosomal protein L4 [Brucella pinnipedialis M292/94/1]
gi|265991309|ref|ZP_06103866.1| ribosomal protein L4 [Brucella melitensis bv. 1 str. Rev.1]
gi|265995146|ref|ZP_06107703.1| ribosomal protein L4 [Brucella melitensis bv. 3 str. Ether]
gi|297248538|ref|ZP_06932256.1| 50S ribosomal protein L4/L1 [Brucella abortus bv. 5 str. B3196]
gi|306840302|ref|ZP_07473074.1| 50S ribosomal protein L4 [Brucella sp. BO2]
gi|306844136|ref|ZP_07476730.1| 50S ribosomal protein L4 [Brucella inopinata BO1]
gi|340790850|ref|YP_004756315.1| 50S ribosomal protein L4 [Brucella pinnipedialis B2/94]
gi|376273038|ref|YP_005151616.1| 50S ribosomal protein L4 [Brucella abortus A13334]
gi|376276156|ref|YP_005116595.1| 50S ribosomal protein L4 [Brucella canis HSK A52141]
gi|376280903|ref|YP_005154909.1| 50S ribosomal protein L4 [Brucella suis VBI22]
gi|384211599|ref|YP_005600681.1| 50S ribosomal protein L4 [Brucella melitensis M5-90]
gi|384224897|ref|YP_005616061.1| 50S ribosomal protein L4 [Brucella suis 1330]
gi|384408707|ref|YP_005597328.1| 50S ribosomal protein4/L1e [Brucella melitensis M28]
gi|384445287|ref|YP_005604006.1| 50S ribosomal protein L4 [Brucella melitensis NI]
gi|423166674|ref|ZP_17153377.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI435a]
gi|423170952|ref|ZP_17157627.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI474]
gi|423172966|ref|ZP_17159637.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI486]
gi|423178341|ref|ZP_17164985.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI488]
gi|423180382|ref|ZP_17167023.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI010]
gi|423183514|ref|ZP_17170151.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI016]
gi|423185546|ref|ZP_17172160.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI021]
gi|423188681|ref|ZP_17175291.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI259]
gi|46577272|sp|Q8G077.1|RL4_BRUSU RecName: Full=50S ribosomal protein L4
gi|51338733|sp|Q8YHN9.2|RL4_BRUME RecName: Full=50S ribosomal protein L4
gi|75496682|sp|Q57CQ9.1|RL4_BRUAB RecName: Full=50S ribosomal protein L4
gi|109893579|sp|Q2YM04.1|RL4_BRUA2 RecName: Full=50S ribosomal protein L4
gi|166234640|sp|A5VR05.1|RL4_BRUO2 RecName: Full=50S ribosomal protein L4
gi|189029492|sp|A9M5P9.1|RL4_BRUC2 RecName: Full=50S ribosomal protein L4
gi|189029493|sp|B0CH31.1|RL4_BRUSI RecName: Full=50S ribosomal protein L4
gi|226730626|sp|B2S678.1|RL4_BRUA1 RecName: Full=50S ribosomal protein L4
gi|254803720|sp|C0RJK0.1|RL4_BRUMB RecName: Full=50S ribosomal protein L4
gi|23348069|gb|AAN30151.1| ribosomal protein L4 [Brucella suis 1330]
gi|62196275|gb|AAX74575.1| RplD, ribosomal protein L4 [Brucella abortus bv. 1 str. 9-941]
gi|82616167|emb|CAJ11210.1| Ribosomal protein L4/L1e [Brucella melitensis biovar Abortus 2308]
gi|82798166|gb|ABB91835.1| ribosomal protein L4 [Brucella abortus]
gi|82798168|gb|ABB91836.1| ribosomal protein L4 [Brucella abortus]
gi|82798170|gb|ABB91837.1| ribosomal protein L4 [Brucella abortus]
gi|82798172|gb|ABB91838.1| ribosomal protein L4 [Brucella abortus]
gi|82798174|gb|ABB91839.1| ribosomal protein L4 [Brucella abortus]
gi|82798176|gb|ABB91840.1| ribosomal protein L4 [Brucella abortus]
gi|82798178|gb|ABB91841.1| ribosomal protein L4 [Brucella abortus]
gi|82798180|gb|ABB91842.1| ribosomal protein L4 [Brucella canis]
gi|82798182|gb|ABB91843.1| ribosomal protein L4 [Brucella melitensis biovar Melitensis]
gi|82798184|gb|ABB91844.1| ribosomal protein L4 [Brucella melitensis biovar Melitensis]
gi|82798186|gb|ABB91845.1| ribosomal protein L4 [Brucella melitensis biovar Melitensis]
gi|82798188|gb|ABB91846.1| ribosomal protein L4 [Brucella neotomae 5K33]
gi|82798190|gb|ABB91847.1| ribosomal protein L4 [Brucella ovis]
gi|82798192|gb|ABB91848.1| ribosomal protein L4 [Brucella suis 1330]
gi|82798194|gb|ABB91849.1| ribosomal protein L4 [Brucella suis ATCC 23445]
gi|82798196|gb|ABB91850.1| ribosomal protein L4 [Brucella suis bv. 3 str. 686]
gi|82798198|gb|ABB91851.1| ribosomal protein L4 [Brucella suis bv. 4 str. 40]
gi|82798200|gb|ABB91852.1| ribosomal protein L4 [Brucella suis]
gi|82798202|gb|ABB91853.1| ribosomal protein L4 [Brucella pinnipedialis]
gi|82798204|gb|ABB91854.1| ribosomal protein L4 [Brucella ceti]
gi|148370659|gb|ABQ60638.1| ribosomal protein L4 [Brucella ovis ATCC 25840]
gi|161335999|gb|ABX62304.1| 50S ribosomal protein L4 [Brucella canis ATCC 23365]
gi|163674221|gb|ABY38332.1| 50S ribosomal protein L4 [Brucella suis ATCC 23445]
gi|189019953|gb|ACD72675.1| Ribosomal protein L4/L1e [Brucella abortus S19]
gi|225617707|gb|EEH14752.1| 50S ribosomal protein L4 [Brucella ceti str. Cudo]
gi|225641094|gb|ACO01008.1| 50S ribosomal protein L4 [Brucella melitensis ATCC 23457]
gi|237788949|gb|EEP63160.1| 50S ribosomal protein L4 [Brucella abortus str. 2308 A]
gi|260095741|gb|EEW79618.1| ribosomal protein L4 [Brucella abortus NCTC 8038]
gi|260151584|gb|EEW86678.1| ribosomal protein L4/L1e [Brucella melitensis bv. 1 str. 16M]
gi|260155757|gb|EEW90837.1| ribosomal protein L4/L1e [Brucella suis bv. 4 str. 40]
gi|260668509|gb|EEX55449.1| ribosomal protein L4 [Brucella abortus bv. 4 str. 292]
gi|260672449|gb|EEX59270.1| ribosomal protein L4 [Brucella abortus bv. 2 str. 86/8/59]
gi|260675083|gb|EEX61904.1| ribosomal protein L4 [Brucella abortus bv. 6 str. 870]
gi|260873512|gb|EEX80581.1| ribosomal protein L4 [Brucella abortus bv. 9 str. C68]
gi|260915836|gb|EEX82697.1| ribosomal protein L4 [Brucella abortus bv. 3 str. Tulya]
gi|260924669|gb|EEX91237.1| ribosomal protein L4 [Brucella ceti M13/05/1]
gi|261294765|gb|EEX98261.1| ribosomal protein L4 [Brucella ceti M644/93/1]
gi|261297089|gb|EEY00586.1| ribosomal protein L4 [Brucella pinnipedialis B2/94]
gi|261301299|gb|EEY04796.1| ribosomal protein L4 [Brucella neotomae 5K33]
gi|261303073|gb|EEY06570.1| ribosomal protein L4 [Brucella pinnipedialis M163/99/10]
gi|261738408|gb|EEY26404.1| ribosomal protein L4 [Brucella sp. F5/99]
gi|261742294|gb|EEY30220.1| ribosomal protein L4 [Brucella suis bv. 5 str. 513]
gi|261744953|gb|EEY32879.1| ribosomal protein L4 [Brucella suis bv. 3 str. 686]
gi|262766259|gb|EEZ12048.1| ribosomal protein L4 [Brucella melitensis bv. 3 str. Ether]
gi|263002093|gb|EEZ14668.1| ribosomal protein L4 [Brucella melitensis bv. 1 str. Rev.1]
gi|263093909|gb|EEZ17843.1| ribosomal protein L4 [Brucella melitensis bv. 2 str. 63/9]
gi|264661092|gb|EEZ31353.1| ribosomal protein L4 [Brucella pinnipedialis M292/94/1]
gi|297175707|gb|EFH35054.1| 50S ribosomal protein L4/L1 [Brucella abortus bv. 5 str. B3196]
gi|306275579|gb|EFM57311.1| 50S ribosomal protein L4 [Brucella inopinata BO1]
gi|306289701|gb|EFM60890.1| 50S ribosomal protein L4 [Brucella sp. BO2]
gi|326409254|gb|ADZ66319.1| Ribosomal protein L4/L1e [Brucella melitensis M28]
gi|326538962|gb|ADZ87177.1| 50S ribosomal protein L4 [Brucella melitensis M5-90]
gi|340559309|gb|AEK54547.1| 50S ribosomal protein L4 [Brucella pinnipedialis B2/94]
gi|343383077|gb|AEM18569.1| 50S ribosomal protein L4 [Brucella suis 1330]
gi|349743278|gb|AEQ08821.1| 50S ribosomal protein L4 [Brucella melitensis NI]
gi|358258502|gb|AEU06237.1| 50S ribosomal protein L4 [Brucella suis VBI22]
gi|363400644|gb|AEW17614.1| 50S ribosomal protein L4 [Brucella abortus A13334]
gi|363404723|gb|AEW15018.1| 50S ribosomal protein L4 [Brucella canis HSK A52141]
gi|374539530|gb|EHR11034.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI474]
gi|374542905|gb|EHR14389.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI435a]
gi|374543521|gb|EHR15003.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI486]
gi|374545580|gb|EHR17041.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI488]
gi|374548946|gb|EHR20393.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI010]
gi|374549577|gb|EHR21020.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI016]
gi|374558339|gb|EHR29732.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI259]
gi|374559637|gb|EHR31022.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI021]
Length = 206
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 53/79 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L ++F + R DI+ RVVRWQLA+RQQG+H + +VS TG K
Sbjct: 3 LTITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTGSK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
++QKGTGRARH + R PQ
Sbjct: 63 MYKQKGTGRARHHSARAPQ 81
>gi|319408764|emb|CBI82421.1| 50S ribosomal protein L4 [Bartonella schoenbuchensis R1]
Length = 206
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + + G + ++ +F + R+DI+ RVVRWQLA+RQQGTH ++ S+V+ T
Sbjct: 2 DLVIKTLD--GNEAGKLKVSEHIFGLAPREDILQRVVRWQLARRQQGTHQSQGRSDVART 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
G K ++QKGTGRARH + R PQ + KA P +
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQ---FRGGGKAHGPVAR 94
>gi|261222394|ref|ZP_05936675.1| ribosomal protein L4 [Brucella ceti B1/94]
gi|265998359|ref|ZP_06110916.1| ribosomal protein L4 [Brucella ceti M490/95/1]
gi|82798206|gb|ABB91855.1| ribosomal protein L4 [Brucella ceti]
gi|260920978|gb|EEX87631.1| ribosomal protein L4 [Brucella ceti B1/94]
gi|262552827|gb|EEZ08817.1| ribosomal protein L4 [Brucella ceti M490/95/1]
Length = 206
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 53/79 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L ++F + R DI+ RVVRWQLA+RQQG+H + +VS TG K
Sbjct: 3 LTITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTGSK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
++QKGTGRARH + R PQ
Sbjct: 63 MYKQKGTGRARHHSARAPQ 81
>gi|302523994|ref|ZP_07276336.1| ribosomal protein L4/L1 [Streptomyces sp. AA4]
gi|302432889|gb|EFL04705.1| ribosomal protein L4/L1 [Streptomyces sp. AA4]
Length = 229
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 49/68 (72%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L G++FDV ++H+VV QLA +QGTH TKT EVSG GKKP+RQKGTGRAR
Sbjct: 15 GTVELPGEIFDVQANVALMHQVVVGQLAAARQGTHDTKTRGEVSGGGKKPYRQKGTGRAR 74
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 75 QGSTRAPQ 82
>gi|303328093|ref|ZP_07358532.1| ribosomal protein L4/L1 family protein [Desulfovibrio sp. 3_1_syn3]
gi|345891281|ref|ZP_08842131.1| 50S ribosomal protein L4 [Desulfovibrio sp. 6_1_46AFAA]
gi|302861919|gb|EFL84854.1| ribosomal protein L4/L1 family protein [Desulfovibrio sp. 3_1_syn3]
gi|345048423|gb|EGW52258.1| 50S ribosomal protein L4 [Desulfovibrio sp. 6_1_46AFAA]
Length = 210
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 55/78 (70%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + ++ G M LA DVF++ +R +I++ VVR Q+A ++ GTH+ KT + VSG G K
Sbjct: 4 VKVYDQNKQESGEMTLASDVFEIEVRPEILNLVVRAQMAAKRAGTHNAKTRAFVSGGGVK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PW+QKGTGRAR G+ R P
Sbjct: 64 PWKQKGTGRARSGSNRSP 81
>gi|110800870|ref|YP_697093.1| 50S ribosomal protein L4 [Clostridium perfringens ATCC 13124]
gi|168211904|ref|ZP_02637529.1| ribosomal protein L4 [Clostridium perfringens B str. ATCC 3626]
gi|168215177|ref|ZP_02640802.1| ribosomal protein L4 [Clostridium perfringens CPE str. F4969]
gi|168216632|ref|ZP_02642257.1| ribosomal protein L4 [Clostridium perfringens NCTC 8239]
gi|169347046|ref|ZP_02865988.1| ribosomal protein L4 [Clostridium perfringens C str. JGS1495]
gi|182626931|ref|ZP_02954664.1| ribosomal protein L4 [Clostridium perfringens D str. JGS1721]
gi|422347466|ref|ZP_16428378.1| 50S ribosomal protein L4 [Clostridium perfringens WAL-14572]
gi|422875350|ref|ZP_16921835.1| 50S ribosomal protein L4 [Clostridium perfringens F262]
gi|123148513|sp|Q0TMP7.1|RL4_CLOP1 RecName: Full=50S ribosomal protein L4
gi|110675517|gb|ABG84504.1| 50S ribosomal protein L4 [Clostridium perfringens ATCC 13124]
gi|169296729|gb|EDS78858.1| ribosomal protein L4 [Clostridium perfringens C str. JGS1495]
gi|170710168|gb|EDT22350.1| ribosomal protein L4 [Clostridium perfringens B str. ATCC 3626]
gi|170713383|gb|EDT25565.1| ribosomal protein L4 [Clostridium perfringens CPE str. F4969]
gi|177907721|gb|EDT70336.1| ribosomal protein L4 [Clostridium perfringens D str. JGS1721]
gi|182381262|gb|EDT78741.1| ribosomal protein L4 [Clostridium perfringens NCTC 8239]
gi|373224764|gb|EHP47101.1| 50S ribosomal protein L4 [Clostridium perfringens WAL-14572]
gi|380303880|gb|EIA16176.1| 50S ribosomal protein L4 [Clostridium perfringens F262]
Length = 204
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G + L VF V + K +H+VV QLA ++QGT S KT SEV G
Sbjct: 1 MPKVGLFNKEGQQVGDIQLNEQVFGVEVNKYALHQVVVAQLANKRQGTQSAKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
G KPWRQKGTGRAR G++R PQ W A KP
Sbjct: 61 GIKPWRQKGTGRARQGSIRAPQ-WIKGGVVFAPKP 94
>gi|110803426|ref|YP_699662.1| 50S ribosomal protein L4 [Clostridium perfringens SM101]
gi|122956495|sp|Q0SQE5.1|RL4_CLOPS RecName: Full=50S ribosomal protein L4
gi|110683927|gb|ABG87297.1| 50S ribosomal protein L4 [Clostridium perfringens SM101]
Length = 204
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G + L VF V + K +H+VV QLA ++QGT S KT SEV G
Sbjct: 1 MPKVGLFNKEGQQVGDIQLNEQVFGVEVNKYALHQVVVAQLANKRQGTQSAKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
G KPWRQKGTGRAR G++R PQ W A KP
Sbjct: 61 GIKPWRQKGTGRARQGSIRAPQ-WIKGGVVFAPKP 94
>gi|326203895|ref|ZP_08193757.1| ribosomal protein L4/L1e [Clostridium papyrosolvens DSM 2782]
gi|325985993|gb|EGD46827.1| ribosomal protein L4/L1e [Clostridium papyrosolvens DSM 2782]
Length = 207
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + +N E G + L +VF + +++H VV QLA ++QGT STKT SEV G
Sbjct: 1 MPKVDLYNMKGEVVGDIQLCDNVFGAEVNNEVLHAVVVNQLANKRQGTQSTKTKSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R Q
Sbjct: 61 GRKPWRQKGTGRARQGSIRSAQ 82
>gi|299135256|ref|ZP_07028447.1| ribosomal protein L4/L1e [Afipia sp. 1NLS2]
gi|298590233|gb|EFI50437.1| ribosomal protein L4/L1e [Afipia sp. 1NLS2]
Length = 206
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 54/81 (66%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT + G + L+ ++F + RKDII RVV WQLAKRQ GTH K +EV TG
Sbjct: 1 MELNVTTLEGKAAGSVNLSDEIFGLEPRKDIIQRVVNWQLAKRQAGTHKAKGRAEVWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KK ++QKGTG ARHG+ R PQ
Sbjct: 61 KKMYKQKGTGGARHGSARVPQ 81
>gi|17987041|ref|NP_539675.1| 50S ribosomal protein L4 [Brucella melitensis bv. 1 str. 16M]
gi|17982697|gb|AAL51939.1| lsu ribosomal protein l1e (= l4p) [Brucella melitensis bv. 1 str.
16M]
Length = 201
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 54/81 (66%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + +T +D G + L ++F + R DI+ RVVRWQLA+RQQG+H + +VS TG
Sbjct: 1 MDLTITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
K ++QKGTGRARH + R PQ
Sbjct: 61 SKMYKQKGTGRARHHSARAPQ 81
>gi|46396649|sp|Q8XHS4.2|RL4_CLOPE RecName: Full=50S ribosomal protein L4
Length = 204
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G + L VF V + K +H+VV QLA ++QGT S KT SEV G
Sbjct: 1 MPKVGLFNKEGQQVGDIQLNEQVFGVEVNKYALHQVVVAQLANKRQGTQSAKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
G KPWRQKGTGRAR G++R PQ W A KP
Sbjct: 61 GIKPWRQKGTGRARQGSIRAPQ-WIKGGVVFAPKP 94
>gi|395765125|ref|ZP_10445741.1| 50S ribosomal protein L4 [Bartonella sp. DB5-6]
gi|395412978|gb|EJF79457.1| 50S ribosomal protein L4 [Bartonella sp. DB5-6]
Length = 206
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + + G + ++ VF + RKDI+ RVVRWQLA+ QQGTH ++ S+VS T
Sbjct: 2 DLVIKTLD--GNETGKLKVSEAVFGLIPRKDILQRVVRWQLARHQQGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
G K ++QKGTGRARH + R PQ + KA P +
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQ---FRGGGKAHGPVAR 94
>gi|335047491|ref|ZP_08540512.1| 50S ribosomal protein L4 [Parvimonas sp. oral taxon 110 str. F0139]
gi|333761299|gb|EGL38854.1| 50S ribosomal protein L4 [Parvimonas sp. oral taxon 110 str. F0139]
Length = 207
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P N +N E G + L +F V + + +++ VV+ LA R+QGT S KT +EV G
Sbjct: 1 MPKVNVYNQLGEVVGDIELNEAIFGVEVNEHVVYEVVKNHLANRRQGTQSAKTRAEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRAPQ 82
>gi|49475793|ref|YP_033834.1| 50S ribosomal protein L4 [Bartonella henselae str. Houston-1]
gi|81647792|sp|Q6G2W6.1|RL4_BARHE RecName: Full=50S ribosomal protein L4
gi|49238600|emb|CAF27841.1| 50S ribosomal protein l4 [Bartonella henselae str. Houston-1]
Length = 206
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DL+I + + G + ++ VF + R+DI+ RVVRWQLA+RQQGTH ++ S+VS T
Sbjct: 2 DLLIKTLD--GNEVGKLKVSESVFGLVPREDILQRVVRWQLARRQQGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
G K ++QKGTGRARH + R PQ + KA P +
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQ---FRGGGKAHGPVVR 94
>gi|451943234|ref|YP_007463870.1| 50S ribosomal protein L4 [Corynebacterium halotolerans YIM 70093 =
DSM 44683]
gi|451902621|gb|AGF71508.1| 50S ribosomal protein L4 [Corynebacterium halotolerans YIM 70093 =
DSM 44683]
Length = 217
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 50/68 (73%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD + ++H+VV QLA +QGTHSTKT SEVSG GKKP+RQKGTGRAR
Sbjct: 17 GQVDLPAEIFDREVSIALMHQVVNAQLAAARQGTHSTKTRSEVSGGGKKPFRQKGTGRAR 76
Query: 172 HGTLRGPQ 179
G++R P
Sbjct: 77 QGSIRAPH 84
>gi|3122740|sp|O06114.1|RL4_MYCSM RecName: Full=50S ribosomal protein L4
gi|2113890|emb|CAA73669.1| ribosomal protein L4 [Mycobacterium smegmatis]
Length = 215
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 50/68 (73%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDV ++H+VV QLA ++QGTHSTKT EVSG GKKP+RQKG+GRAR
Sbjct: 16 GSVELPAELFDVEPNIALMHQVVTAQLAAKRQGTHSTKTRGEVSGGGKKPYRQKGSGRAR 75
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 76 QGSTRAPQ 83
>gi|256825885|ref|YP_003149845.1| 50S ribosomal protein L4P [Kytococcus sedentarius DSM 20547]
gi|256689278|gb|ACV07080.1| LSU ribosomal protein L4P [Kytococcus sedentarius DSM 20547]
Length = 223
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 49/68 (72%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDV +IH+VV QLA +QGTHSTKT +EV G G+KP+RQKGTGRAR
Sbjct: 15 GSVELPAEIFDVAANVPLIHQVVVAQLAAARQGTHSTKTRAEVRGGGRKPYRQKGTGRAR 74
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 75 QGSTRAPQ 82
>gi|153009287|ref|YP_001370502.1| 50S ribosomal protein L4 [Ochrobactrum anthropi ATCC 49188]
gi|404318989|ref|ZP_10966922.1| 50S ribosomal protein L4 [Ochrobactrum anthropi CTS-325]
gi|166234695|sp|A6X0B9.1|RL4_OCHA4 RecName: Full=50S ribosomal protein L4
gi|151561175|gb|ABS14673.1| ribosomal protein L4/L1e [Ochrobactrum anthropi ATCC 49188]
Length = 206
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 53/79 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L ++F + R DI+ RVVRWQLA+RQQG+H + +VS TG K
Sbjct: 3 LTITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
++QKGTGRARH + R PQ
Sbjct: 63 MYKQKGTGRARHHSARAPQ 81
>gi|18311386|ref|NP_563320.1| 50S ribosomal protein L4 [Clostridium perfringens str. 13]
gi|18146070|dbj|BAB82110.1| 50S ribosomal protein L4 [Clostridium perfringens str. 13]
Length = 175
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G + L VF V + K +H+VV QLA ++QGT S KT SEV G
Sbjct: 1 MPKVGLFNKEGQQVGDIQLNEQVFGVEVNKYALHQVVVAQLANKRQGTQSAKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
G KPWRQKGTGRAR G++R PQ W A KP
Sbjct: 61 GIKPWRQKGTGRARQGSIRAPQ-WIKGGVVFAPKP 94
>gi|308809341|ref|XP_003081980.1| 50S ribosomal protein L4 (ISS) [Ostreococcus tauri]
gi|116060447|emb|CAL55783.1| 50S ribosomal protein L4 (ISS) [Ostreococcus tauri]
Length = 275
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 47/69 (68%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
+G L G +FD P+R D+ HRVVRWQ AK + GTH TKT EVSGT +K QKG GRA
Sbjct: 53 RGEATLPGRIFDQPLRVDVAHRVVRWQRAKARAGTHKTKTRGEVSGTTRKARPQKGQGRA 112
Query: 171 RHGTLRGPQ 179
R G LR PQ
Sbjct: 113 RVGMLRAPQ 121
>gi|381164254|ref|ZP_09873484.1| 50S ribosomal protein L4, bacterial/organelle [Saccharomonospora
azurea NA-128]
gi|379256159|gb|EHY90085.1| 50S ribosomal protein L4, bacterial/organelle [Saccharomonospora
azurea NA-128]
Length = 228
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 51/71 (71%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
E +G + L G++FDV ++H+VV Q+A +QGTH TKT EV G G+KP+RQKGTG
Sbjct: 13 EAQGTVELPGEIFDVQANIALMHQVVVAQMAAARQGTHDTKTRGEVRGGGRKPYRQKGTG 72
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 73 RARQGSVRAPQ 83
>gi|374300543|ref|YP_005052182.1| 50S ribosomal protein L4 [Desulfovibrio africanus str. Walvis Bay]
gi|332553479|gb|EGJ50523.1| ribosomal protein L4/L1e [Desulfovibrio africanus str. Walvis Bay]
Length = 206
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 66/103 (64%), Gaps = 4/103 (3%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
V+ V + ++ G + LA +VF+VP+R +I++ VVR Q A + GTH TK + ++G GK
Sbjct: 3 VVKVVDQAKKEIGDIELAPEVFEVPVRPEILNLVVRAQRAAARSGTHMTKNRALITGGGK 62
Query: 160 KPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP---CYKVEQE 199
KPWRQKGTGRAR G+ R P W + A + +P +KV ++
Sbjct: 63 KPWRQKGTGRARAGSSRSPL-WRHGATTFGPQPRSYAFKVNKK 104
>gi|451942180|ref|YP_007462817.1| 50S ribosomal protein L4 [Bartonella vinsonii subsp. berkhoffii
str. Winnie]
gi|451901567|gb|AGF76029.1| 50S ribosomal protein L4 [Bartonella vinsonii subsp. berkhoffii
str. Winnie]
Length = 207
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DL++ + + G + ++ +F + R+DI+ RV+RWQLA+RQQGTH ++ S+VS T
Sbjct: 3 DLIVKTLD--GNEAGKLKVSEGIFGLVPREDILQRVIRWQLARRQQGTHQSQGRSDVSRT 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
G K ++QKGTGRARH + R PQ + KA P ++
Sbjct: 61 GAKMFKQKGTGRARHSSARVPQ---FRGGGKAHGPVFR 95
>gi|418460805|ref|ZP_13031892.1| 50S ribosomal protein L4 [Saccharomonospora azurea SZMC 14600]
gi|359739113|gb|EHK87986.1| 50S ribosomal protein L4 [Saccharomonospora azurea SZMC 14600]
Length = 228
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 51/71 (71%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
E +G + L G++FDV ++H+VV Q+A +QGTH TKT EV G G+KP+RQKGTG
Sbjct: 13 EAQGTVELPGEIFDVQANIALMHQVVVAQMAAARQGTHDTKTRGEVRGGGRKPYRQKGTG 72
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 73 RARQGSVRAPQ 83
>gi|386394163|ref|ZP_10078944.1| 50S ribosomal protein L4, bacterial/organelle [Desulfovibrio sp.
U5L]
gi|385735041|gb|EIG55239.1| 50S ribosomal protein L4, bacterial/organelle [Desulfovibrio sp.
U5L]
Length = 210
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 53/71 (74%)
Query: 108 NEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGT 167
N++ G + L +VF+V ++ +++H VVR QLA ++ GTHS KT + VSG GKKPWRQKGT
Sbjct: 11 NQEIGTVELDPEVFEVEVQPELLHLVVRAQLAAKRAGTHSVKTRAFVSGGGKKPWRQKGT 70
Query: 168 GRARHGTLRGP 178
GRAR G+ R P
Sbjct: 71 GRARAGSTRSP 81
>gi|42520529|ref|NP_966444.1| 50S ribosomal protein L4 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|46577161|sp|P61071.1|RL4_WOLPM RecName: Full=50S ribosomal protein L4
gi|42410268|gb|AAS14378.1| ribosomal protein L4 [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 204
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 51/77 (66%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N N++ G L +F + I+H +VRWQLAKR+ GTH TK IS+VSGT KP+
Sbjct: 5 LVNLSNDNVGAAQLNPLIFSAKQKLSILHDIVRWQLAKRRAGTHKTKGISDVSGTTAKPY 64
Query: 163 RQKGTGRARHGTLRGPQ 179
QK TGRAR G+LR PQ
Sbjct: 65 GQKRTGRARQGSLRSPQ 81
>gi|404372642|ref|ZP_10977937.1| 50S ribosomal protein L4 [Clostridium sp. 7_2_43FAA]
gi|226911220|gb|EEH96421.1| 50S ribosomal protein L4 [Clostridium sp. 7_2_43FAA]
Length = 206
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G + L +VF V + D +H+VV LA ++QGT S KT +EV G
Sbjct: 1 MPTVGLFNQEGKQVGDIQLNDNVFGVEVNTDAMHQVVVALLANKRQGTQSAKTRAEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
G KPWRQKGTGRAR G++R PQ W A KP
Sbjct: 61 GIKPWRQKGTGRARQGSIRAPQ-WIKGGIVFAPKP 94
>gi|357635318|ref|ZP_09133196.1| ribosomal protein L4/L1e [Desulfovibrio sp. FW1012B]
gi|357583872|gb|EHJ49205.1| ribosomal protein L4/L1e [Desulfovibrio sp. FW1012B]
Length = 210
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 53/71 (74%)
Query: 108 NEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGT 167
N++ G + L +VF+V ++ +++H VVR QLA ++ GTHS KT + VSG GKKPWRQKGT
Sbjct: 11 NQEIGTVELDPEVFEVEVQPELLHLVVRAQLAAKRAGTHSVKTRAFVSGGGKKPWRQKGT 70
Query: 168 GRARHGTLRGP 178
GRAR G+ R P
Sbjct: 71 GRARAGSTRSP 81
>gi|284992873|ref|YP_003411427.1| 50S ribosomal protein L4/L1e [Geodermatophilus obscurus DSM 43160]
gi|284066118|gb|ADB77056.1| ribosomal protein L4/L1e [Geodermatophilus obscurus DSM 43160]
Length = 292
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 53/82 (64%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
D + V E G + L G++FD ++H+VV QLA +QGTH+TKT +VSG
Sbjct: 15 DRQVDVRTPAGETSGSVTLPGELFDASANVSLMHQVVVAQLAAARQGTHATKTRGQVSGG 74
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G KP+RQKGTGRAR G++R PQ
Sbjct: 75 GIKPYRQKGTGRARQGSIRAPQ 96
>gi|225621029|ref|YP_002722287.1| 50S ribosomal protein L4 [Brachyspira hyodysenteriae WA1]
gi|296126866|ref|YP_003634118.1| 50S ribosomal protein L4 [Brachyspira murdochii DSM 12563]
gi|384210011|ref|YP_005595731.1| 50S ribosomal protein L4 [Brachyspira intermedia PWS/A]
gi|254803718|sp|C0QVZ7.1|RL4_BRAHW RecName: Full=50S ribosomal protein L4
gi|225215849|gb|ACN84583.1| 50S ribosomal protein L4 [Brachyspira hyodysenteriae WA1]
gi|296018682|gb|ADG71919.1| ribosomal protein L4/L1e [Brachyspira murdochii DSM 12563]
gi|343387661|gb|AEM23151.1| 50S ribosomal protein L4 [Brachyspira intermedia PWS/A]
Length = 215
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + + N + G + + ++F + ++++ ++ +LA R+QGTHSTKT +EVSG G
Sbjct: 1 MEVVILNENGDSVGNLEIVDEIFKSEVNNNLLYEAIKNELANRRQGTHSTKTRAEVSGGG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
KKPWRQKGTGRAR G+ R P W ++ KP
Sbjct: 61 KKPWRQKGTGRARAGSTRSPI-WVGGGKTHTPKP 93
>gi|239905859|ref|YP_002952598.1| 50S ribosomal protein L4 [Desulfovibrio magneticus RS-1]
gi|259491554|sp|C4XLX4.1|RL4_DESMR RecName: Full=50S ribosomal protein L4
gi|239795723|dbj|BAH74712.1| 50S ribosomal protein L4 [Desulfovibrio magneticus RS-1]
Length = 210
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 104 TNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
FN+ + G + LA +VF+V ++ +++H VVR QLA ++ GTHS KT + VSG GKK
Sbjct: 4 VKLFNQGCQEIGTVDLAPEVFEVEVQPELLHLVVRAQLAAKRAGTHSVKTRAFVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRAR G+ R P
Sbjct: 64 PWRQKGTGRARAGSTRSP 81
>gi|225630300|ref|YP_002727091.1| ribosomal protein L4 [Wolbachia sp. wRi]
gi|254803765|sp|C0R308.1|RL4_WOLWR RecName: Full=50S ribosomal protein L4
gi|225592281|gb|ACN95300.1| ribosomal protein L4 [Wolbachia sp. wRi]
Length = 204
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 51/77 (66%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N N++ G L +F + I+H +VRWQLAKR+ GTH TK IS+VSGT KP+
Sbjct: 5 LVNLSNDNVGTAQLNPLIFSAKQKLSILHDIVRWQLAKRRAGTHKTKGISDVSGTTAKPY 64
Query: 163 RQKGTGRARHGTLRGPQ 179
QK TGRAR G+LR PQ
Sbjct: 65 GQKRTGRARQGSLRSPQ 81
>gi|407474712|ref|YP_006789112.1| 50S ribosomal protein L4 [Clostridium acidurici 9a]
gi|407051220|gb|AFS79265.1| 50S ribosomal protein L4 [Clostridium acidurici 9a]
Length = 213
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E G + L +F V + + +++ VV+ QLA ++QGT S KT +EV G G+K
Sbjct: 10 VALYNVTGEQVGDIELNDSIFGVEVNQHVLYEVVKNQLANKRQGTQSVKTRAEVRGGGRK 69
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP---CYKV 196
PWRQKGTGRAR G+ R PQ W A KP YKV
Sbjct: 70 PWRQKGTGRARQGSTRAPQ-WVGGGVVFAPKPRDYSYKV 107
>gi|302876533|ref|YP_003845166.1| 50S ribosomal protein L4 [Clostridium cellulovorans 743B]
gi|307687206|ref|ZP_07629652.1| 50S ribosomal protein L4 [Clostridium cellulovorans 743B]
gi|302579390|gb|ADL53402.1| ribosomal protein L4/L1e [Clostridium cellulovorans 743B]
Length = 206
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN ++ G + L +VF I + +H+VV LA ++QGT S KT +EVSG
Sbjct: 1 MPTVGLFNKEGQNVGDIQLNDNVFAAKISEAAVHQVVVALLANKRQGTQSAKTRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
G KPWRQKGTGRAR G++R PQ W + A KP
Sbjct: 61 GIKPWRQKGTGRARQGSIRSPQ-WIHGGIVFAPKP 94
>gi|363423639|ref|ZP_09311702.1| 50S ribosomal protein L4 [Rhodococcus pyridinivorans AK37]
gi|359731577|gb|EHK80619.1| 50S ribosomal protein L4 [Rhodococcus pyridinivorans AK37]
Length = 227
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V + G + L ++FD P ++H+VV QLA +QGTH+TKT EV G G
Sbjct: 10 LTLDVKAPGGQTSGSVDLPAEIFDAPANIALLHQVVTAQLAAARQGTHATKTRGEVRGGG 69
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KKP+RQKGTGRAR G+ R PQ
Sbjct: 70 KKPYRQKGTGRARQGSTRAPQ 90
>gi|429123821|ref|ZP_19184353.1| 50S ribosomal protein L4 [Brachyspira hampsonii 30446]
gi|445062118|ref|ZP_21374553.1| 50S ribosomal protein L4 [Brachyspira hampsonii 30599]
gi|426280390|gb|EKV57405.1| 50S ribosomal protein L4 [Brachyspira hampsonii 30446]
gi|444506513|gb|ELV06840.1| 50S ribosomal protein L4 [Brachyspira hampsonii 30599]
Length = 215
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + + N + G + + ++F + ++++ ++ +LA R+QGTHSTKT +EVSG G
Sbjct: 1 MEVVILNENGDSVGNLEIVDEIFKSEVNNNLLYEAIKNELANRRQGTHSTKTRAEVSGGG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
KKPWRQKGTGRAR G+ R P W ++ KP
Sbjct: 61 KKPWRQKGTGRARAGSTRSPI-WVGGGKTHTPKP 93
>gi|403743621|ref|ZP_10953173.1| 50S ribosomal protein L4/L1e [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122651|gb|EJY56856.1| 50S ribosomal protein L4/L1e [Alicyclobacillus hesperidum
URH17-3-68]
Length = 206
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + + L+ +F P+R D++H+VV LA R+ GTH K + VSG G+K
Sbjct: 4 VAVLNTAGQQVSELQLSDKIFGAPVRLDLMHQVVLQYLAARRAGTHKVKNRAAVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G++R PQ
Sbjct: 64 PWRQKGTGRARQGSIRAPQ 82
>gi|452820155|gb|EME27201.1| 50S ribosomal protein L4 [Galdieria sulphuraria]
Length = 493
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L G +F+ IR DI+HRVV WQ A R++G H+TKT +EVSG G+KP QKGTGR+R G++
Sbjct: 292 LPGIIFNAVIRPDIVHRVVVWQAACRRRGIHNTKTRAEVSGGGRKPRPQKGTGRSRQGSI 351
Query: 176 RGPQGWYYNARSKAQKPCYKVEQEG 200
R P W + + KP QE
Sbjct: 352 RSPL-WVHGGVAHGPKPKDYSYQEA 375
>gi|452818782|gb|EME25974.1| 50S ribosomal protein L4 (mitochondrial) [Galdieria sulphuraria]
Length = 279
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L G +F+ IR DI+HRVV WQ A R++G H+TKT +EVSG G+KP QKGTGR+R G++
Sbjct: 80 LPGIIFNAVIRPDIVHRVVVWQAACRRRGIHNTKTRAEVSGGGRKPRPQKGTGRSRQGSI 139
Query: 176 RGPQGWYYNARSKAQKPCYKVEQEG 200
R P W + + KP QE
Sbjct: 140 RSPL-WVHGGVAHGPKPKDYSYQEA 163
>gi|253580620|ref|ZP_04857884.1| 50S ribosomal protein L4/L1 [Ruminococcus sp. 5_1_39B_FAA]
gi|251847991|gb|EES75957.1| 50S ribosomal protein L4/L1 [Ruminococcus sp. 5_1_39BFAA]
Length = 206
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 49/79 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G M L VF V + + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VTVYNMEGNEVGTMELNDAVFGVEVNEHLVHLAVVRQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G++R PQ
Sbjct: 64 PWRQKGTGHARQGSIRAPQ 82
>gi|383482518|ref|YP_005391432.1| 50S ribosomal protein L4 [Rickettsia montanensis str. OSU 85-930]
gi|378934872|gb|AFC73373.1| 50S ribosomal protein L4 [Rickettsia montanensis str. OSU 85-930]
Length = 207
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + NE+ G + L D+F V IR DI+ +V+ WQ AK G H TKT+SEV GT KKP
Sbjct: 5 ILSLANEEVGEISLNEDIFAVEFIRDDIVKQVIDWQRAKAMSGNHKTKTVSEVLGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQ 179
++QKGTG AR G+LR Q
Sbjct: 65 FKQKGTGNARQGSLRSVQ 82
>gi|319405897|emb|CBI79529.1| 50S ribosomal protein L4 [Bartonella sp. AR 15-3]
Length = 206
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 64/98 (65%), Gaps = 5/98 (5%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLV+ + ++ G + ++ ++F + R+DI+ RV+RWQLA+RQ+GTH ++ S+VS T
Sbjct: 2 DLVVKTLD--GKEAGKLKVSENIFGLTPREDILQRVIRWQLARRQKGTHPSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
G K ++QKGTGRARH + R PQ + KA P +
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQ---FRGGGKAHGPVMR 94
>gi|160947699|ref|ZP_02094866.1| hypothetical protein PEPMIC_01634 [Parvimonas micra ATCC 33270]
gi|158446833|gb|EDP23828.1| 50S ribosomal protein L4 [Parvimonas micra ATCC 33270]
Length = 207
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P N +N E G + L +F + + + +++ VV+ LA R+QGT S KT +EV G
Sbjct: 1 MPKVNVYNQLGEVVGDIELNEAIFGIEVNEHVVYEVVKNHLANRRQGTQSAKTRAEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRAPQ 82
>gi|15896382|ref|NP_349731.1| 50S ribosomal protein L4 [Clostridium acetobutylicum ATCC 824]
gi|337738339|ref|YP_004637786.1| 50S ribosomal protein L4 [Clostridium acetobutylicum DSM 1731]
gi|384459849|ref|YP_005672269.1| 50S ribosomal protein L4 [Clostridium acetobutylicum EA 2018]
gi|46577285|sp|Q97EH9.1|RL4_CLOAB RecName: Full=50S ribosomal protein L4
gi|15026198|gb|AAK81071.1|AE007808_24 Ribosomal protein L4 [Clostridium acetobutylicum ATCC 824]
gi|325510538|gb|ADZ22174.1| 50S ribosomal protein L4 [Clostridium acetobutylicum EA 2018]
gi|336292263|gb|AEI33397.1| 50S ribosomal protein L4 [Clostridium acetobutylicum DSM 1731]
Length = 206
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 59/96 (61%), Gaps = 6/96 (6%)
Query: 101 IPVTNFFNEDKGFMV----LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSG 156
+P FN++ G V L+ VF I + +H+VV QLA ++QGT S KT +EVSG
Sbjct: 1 MPTVEVFNKE-GKKVEDIELSEKVFGAKISESALHQVVVAQLANKRQGTQSAKTRTEVSG 59
Query: 157 TGKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
G KPWRQKGTGRAR G++R PQ W + A KP
Sbjct: 60 GGIKPWRQKGTGRARQGSIRAPQ-WIHGGVVFAPKP 94
>gi|258406184|ref|YP_003198926.1| 50S ribosomal protein L4 [Desulfohalobium retbaense DSM 5692]
gi|257798411|gb|ACV69348.1| ribosomal protein L4/L1e [Desulfohalobium retbaense DSM 5692]
Length = 206
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 56/79 (70%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
V+ + + N+ G + L+ +VF+ +R +I+H+VVR QLA +++GT KT S + G G+
Sbjct: 3 VVQIVDKSNQAVGEVTLSSEVFEREVRAEILHQVVRSQLAAKRRGTVGVKTRSLIRGGGR 62
Query: 160 KPWRQKGTGRARHGTLRGP 178
KPWRQKGTGRAR GT+R P
Sbjct: 63 KPWRQKGTGRARAGTVRSP 81
>gi|300870646|ref|YP_003785517.1| 50S ribosomal protein L4 [Brachyspira pilosicoli 95/1000]
gi|404475006|ref|YP_006706437.1| 50S ribosomal protein L4 [Brachyspira pilosicoli B2904]
gi|431808526|ref|YP_007235424.1| 50S ribosomal protein L4 [Brachyspira pilosicoli P43/6/78]
gi|434383121|ref|YP_006704904.1| 50S ribosomal protein L4 [Brachyspira pilosicoli WesB]
gi|46577291|sp|Q9FA03.1|RL4_BRAPL RecName: Full=50S ribosomal protein L4
gi|11036694|gb|AAG27265.1| L4 ribosomal protein [Brachyspira pilosicoli P43/6/78]
gi|300688345|gb|ADK31016.1| 50S ribosomal protein L4 [Brachyspira pilosicoli 95/1000]
gi|404431770|emb|CCG57816.1| 50S ribosomal protein L4 [Brachyspira pilosicoli WesB]
gi|404436495|gb|AFR69689.1| 50S ribosomal protein L4 [Brachyspira pilosicoli B2904]
gi|430781885|gb|AGA67169.1| 50S ribosomal protein L4 [Brachyspira pilosicoli P43/6/78]
Length = 215
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + + N + G + + ++F + ++++ ++ +LA R+QGTHSTKT +EVSG G
Sbjct: 1 MEVVILNENGDSVGNLEVVDEIFKSEVNNNLLYEAIKNELANRRQGTHSTKTRAEVSGGG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
KKPWRQKGTGRAR G+ R P W ++ KP
Sbjct: 61 KKPWRQKGTGRARAGSTRSPI-WVGGGKTHTPKP 93
>gi|307946287|ref|ZP_07661622.1| ribosomal protein, L4/L1 family [Roseibium sp. TrichSKD4]
gi|307769951|gb|EFO29177.1| ribosomal protein, L4/L1 family [Roseibium sp. TrichSKD4]
Length = 206
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 49/68 (72%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + ++ ++F + R D+IHRVVRWQLAKRQ GTH T SEV+GT KK RQKG+G AR
Sbjct: 14 GSITVSDEIFGLEPRTDLIHRVVRWQLAKRQAGTHKTLQRSEVTGTTKKFVRQKGSGGAR 73
Query: 172 HGTLRGPQ 179
HG + PQ
Sbjct: 74 HGNRKAPQ 81
>gi|315605900|ref|ZP_07880931.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315312182|gb|EFU60268.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 216
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 55/85 (64%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ D + V + + G + L G +FDVP ++H+VV QLA +QGTH+TKT +V
Sbjct: 3 MADDRNVDVIDLTGKKVGSVSLPGSIFDVPTNIPLMHQVVVAQLAAARQGTHATKTRGQV 62
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
+G GKKP+RQKGTG AR G++R P
Sbjct: 63 AGGGKKPFRQKGTGNARQGSIRAPH 87
>gi|343520774|ref|ZP_08757743.1| 50S ribosomal protein L4 [Parvimonas sp. oral taxon 393 str. F0440]
gi|343397732|gb|EGV10266.1| 50S ribosomal protein L4 [Parvimonas sp. oral taxon 393 str. F0440]
Length = 207
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P N +N E G + L +F + + + +++ VV+ LA R+QGT S KT +EV G
Sbjct: 1 MPKVNVYNQLGEVVGDIELNEAIFGIEVNEHVVYEVVKNHLANRRQGTQSAKTRAEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRAPQ 82
>gi|395767222|ref|ZP_10447757.1| 50S ribosomal protein L4 [Bartonella doshiae NCTC 12862]
gi|395414535|gb|EJF80977.1| 50S ribosomal protein L4 [Bartonella doshiae NCTC 12862]
Length = 206
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 5/114 (4%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DL+I + + G + ++ +F + R+DI+ RVV WQLA+RQQGTH ++ S+VS T
Sbjct: 2 DLIIKTLD--GNEAGKLTVSRGIFGLVPREDILQRVVLWQLARRQQGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYKVEQEGAAAWVEDCSIC 211
G K ++QKGTGRARH + R PQ + KA P + V +C
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQ---FRGGGKAHGPVVRSHAHDLPKKVRALGLC 110
>gi|302390959|ref|YP_003826779.1| 50S ribosomal protein L4P [Acetohalobium arabaticum DSM 5501]
gi|302203036|gb|ADL11714.1| LSU ribosomal protein L4P [Acetohalobium arabaticum DSM 5501]
Length = 209
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 48/67 (71%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L +FDV I + ++H V QLA ++ GT STKT +EV G G+KPWRQKGTGRAR
Sbjct: 15 GEVELNQSIFDVEINEHVVHEAVTAQLAAKRAGTASTKTRAEVRGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGP 178
HG++R P
Sbjct: 75 HGSIRSP 81
>gi|300857245|ref|YP_003782229.1| 50S ribosomal protein L4 [Clostridium ljungdahlii DSM 13528]
gi|300437360|gb|ADK17127.1| 50S ribosomal protein L4 [Clostridium ljungdahlii DSM 13528]
Length = 206
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 60/96 (62%), Gaps = 6/96 (6%)
Query: 101 IPVTNFFNEDKGFMV----LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSG 156
+P FN++ G V L+ VF V + ++ +H+VV LA ++QGT S KT +EVSG
Sbjct: 1 MPKVGLFNKE-GQKVEDFELSDKVFGVEVNENAVHQVVVALLANKRQGTQSAKTRAEVSG 59
Query: 157 TGKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
G KPWRQKGTGRAR G++R PQ W + A KP
Sbjct: 60 GGIKPWRQKGTGRARQGSIRAPQ-WIHGGIVFAVKP 94
>gi|226365596|ref|YP_002783379.1| 50S ribosomal protein L4 [Rhodococcus opacus B4]
gi|226244086|dbj|BAH54434.1| 50S ribosomal protein L4 [Rhodococcus opacus B4]
Length = 229
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 48/68 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTH+TKT EV G GKKP+RQKGTGRAR
Sbjct: 24 GTVELPAEIFDAPANIALLHQVVVAQLAAARQGTHATKTRGEVRGGGKKPYRQKGTGRAR 83
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 84 QGSTRAPQ 91
>gi|410668886|ref|YP_006921257.1| 50S ribosomal protein L4 [Thermacetogenium phaeum DSM 12270]
gi|409106633|gb|AFV12758.1| 50S ribosomal protein L4 [Thermacetogenium phaeum DSM 12270]
Length = 209
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN + G + L DVF VP+ + ++H+ V LA R+ GT +TKT EV GT
Sbjct: 1 MPKAALFNTEGVRIGEVELRDDVFGVPVNEHVLHQAVVRHLANRRAGTAATKTRGEVQGT 60
Query: 158 GKKPWRQKGTGRARHGTLRGP 178
G+KPWRQKGTGRAR G++R P
Sbjct: 61 GRKPWRQKGTGRARVGSIRSP 81
>gi|121602068|ref|YP_988968.1| 50S ribosomal protein L4 [Bartonella bacilliformis KC583]
gi|121602137|ref|YP_988998.1| 50S ribosomal protein L4 [Bartonella bacilliformis KC583]
gi|421760771|ref|ZP_16197585.1| 50S ribosomal protein L4 [Bartonella bacilliformis INS]
gi|421760801|ref|ZP_16197615.1| 50S ribosomal protein L4 [Bartonella bacilliformis INS]
gi|120614245|gb|ABM44846.1| ribosomal protein L4 [Bartonella bacilliformis KC583]
gi|120614314|gb|ABM44915.1| ribosomal protein L4 [Bartonella bacilliformis KC583]
gi|411174539|gb|EKS44571.1| 50S ribosomal protein L4 [Bartonella bacilliformis INS]
gi|411174569|gb|EKS44601.1| 50S ribosomal protein L4 [Bartonella bacilliformis INS]
Length = 206
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 5/103 (4%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DL+I + + G + ++ VF + R+DI+ RVVRWQLA+RQ+GTH + S++S T
Sbjct: 2 DLIIKTLD--GKKTGELSVSEHVFGLVPREDILQRVVRWQLARRQKGTHKVQGRSDISRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYKVEQEG 200
G K ++QKGTGRARH + R PQ + KA P + G
Sbjct: 60 GAKMYKQKGTGRARHSSARAPQ---FRGGGKAHGPVIRSHAHG 99
>gi|414153573|ref|ZP_11409896.1| 50S ribosomal protein L4 [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411454971|emb|CCO07800.1| 50S ribosomal protein L4 [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 206
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E G + L +VF + + ++H V QLA ++QGTH TKT +EVSG G+K
Sbjct: 4 VALYNVNGEQVGEVELKDEVFGIEPHESVLHDAVTMQLANQRQGTHDTKTRAEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRAR G++R P
Sbjct: 64 PWRQKGTGRARVGSIRSP 81
>gi|405981223|ref|ZP_11039550.1| 50S ribosomal protein L4 [Actinomyces neuii BVS029A5]
gi|404392147|gb|EJZ87207.1| 50S ribosomal protein L4 [Actinomyces neuii BVS029A5]
Length = 216
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ + L I + + + G L ++FD + +IH+VV QLA +QGTH+TKT V
Sbjct: 1 MSEKLTIDIVDAEGKATGTYELPAEIFDRELNIPLIHQVVVAQLAAARQGTHATKTRGNV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
G GKKPW+QKGTGRAR G++R PQ W S +P
Sbjct: 61 RGGGKKPWKQKGTGRARQGSIRSPQ-WVGGGVSHGPQP 97
>gi|349685845|ref|ZP_08896987.1| 50S ribosomal protein L4 [Gluconacetobacter oboediens 174Bp2]
Length = 204
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N G L ++F R DI+ RVV WQLAKR+ G H K + E+SGT KKP+
Sbjct: 5 IKTLDNGSAGKTSLPDEIFAATPRTDIMARVVHWQLAKRRAGKHKVKGMGEISGTTKKPY 64
Query: 163 RQKGTGRARHGTLRGPQ 179
RQKGTG AR G+LR PQ
Sbjct: 65 RQKGTGSARQGSLRSPQ 81
>gi|148260938|ref|YP_001235065.1| 50S ribosomal protein L4 [Acidiphilium cryptum JF-5]
gi|326404336|ref|YP_004284418.1| 50S ribosomal protein L4 [Acidiphilium multivorum AIU301]
gi|338989186|ref|ZP_08634057.1| RplD [Acidiphilium sp. PM]
gi|166234626|sp|A5FZW4.1|RL4_ACICJ RecName: Full=50S ribosomal protein L4
gi|146402619|gb|ABQ31146.1| LSU ribosomal protein L4P [Acidiphilium cryptum JF-5]
gi|325051198|dbj|BAJ81536.1| 50S ribosomal protein L4 [Acidiphilium multivorum AIU301]
gi|338205873|gb|EGO94138.1| RplD [Acidiphilium sp. PM]
Length = 216
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 119 DVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGP 178
+ F R DI+ RVV WQLAKR+ GTH K + EVSGT KKP+RQKGTG AR G+LR P
Sbjct: 21 EYFAATPRADIMARVVHWQLAKRRAGTHKVKGMGEVSGTTKKPYRQKGTGNARQGSLRAP 80
Query: 179 Q 179
Q
Sbjct: 81 Q 81
>gi|265984290|ref|ZP_06097025.1| ribosomal protein L4 [Brucella sp. 83/13]
gi|306838042|ref|ZP_07470900.1| 50S ribosomal protein L4 [Brucella sp. NF 2653]
gi|264662882|gb|EEZ33143.1| ribosomal protein L4 [Brucella sp. 83/13]
gi|306406966|gb|EFM63187.1| 50S ribosomal protein L4 [Brucella sp. NF 2653]
Length = 206
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L ++F + R DI+ RVVRWQLA RQQG+H + +VS TG K
Sbjct: 3 LTITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLAHRQQGSHKAQGRGDVSRTGSK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
++QKGTGRARH + R PQ
Sbjct: 63 MYKQKGTGRARHHSARAPQ 81
>gi|384500965|gb|EIE91456.1| hypothetical protein RO3G_16167 [Rhizopus delemar RA 99-880]
Length = 247
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 49/72 (68%)
Query: 108 NEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGT 167
NE + L +VF VPIR+DI+HRVV WQ +QGT STKT +EVSGTGKK QKG
Sbjct: 48 NEPVSIINLEKEVFGVPIRRDILHRVVVWQRDSMRQGTSSTKTRAEVSGTGKKAAPQKGR 107
Query: 168 GRARHGTLRGPQ 179
G+AR G ++ P
Sbjct: 108 GKARVGDMKAPH 119
>gi|407982446|ref|ZP_11163122.1| 50S ribosomal protein L4 [Mycobacterium hassiacum DSM 44199]
gi|407375958|gb|EKF24898.1| 50S ribosomal protein L4 [Mycobacterium hassiacum DSM 44199]
Length = 211
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 50/69 (72%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
+G + L ++FDV ++H+VV QLA +QGTHSTKT EVSG G+KP+RQKGTGRA
Sbjct: 9 EGSVELPAELFDVEPNIPLMHQVVTAQLAAARQGTHSTKTRGEVSGGGRKPYRQKGTGRA 68
Query: 171 RHGTLRGPQ 179
R G+ R PQ
Sbjct: 69 RQGSTRAPQ 77
>gi|225027479|ref|ZP_03716671.1| hypothetical protein EUBHAL_01735 [Eubacterium hallii DSM 3353]
gi|224955214|gb|EEG36423.1| 50S ribosomal protein L4 [Eubacterium hallii DSM 3353]
Length = 198
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 48/68 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ +F VP+ + ++H+ V QLA ++QGT KT SEV G G+KPWRQKGTG AR
Sbjct: 7 GTIELSDSIFAVPVNEHLVHQAVVAQLANKRQGTQKAKTRSEVRGGGRKPWRQKGTGHAR 66
Query: 172 HGTLRGPQ 179
G++R PQ
Sbjct: 67 QGSIRAPQ 74
>gi|257064319|ref|YP_003143991.1| 50S ribosomal protein L4 [Slackia heliotrinireducens DSM 20476]
gi|256791972|gb|ACV22642.1| ribosomal protein L4 [Slackia heliotrinireducens DSM 20476]
Length = 207
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 48/79 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + N E + L VF + ++H VVR Q A +QGTH TKT EV G GKK
Sbjct: 4 IEIKNASGEKASEVELESAVFGIEPNVHVMHTVVRSQQAAMRQGTHDTKTRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR GT+R PQ
Sbjct: 64 PWRQKGTGRARQGTIRAPQ 82
>gi|395784124|ref|ZP_10463963.1| 50S ribosomal protein L4 [Bartonella melophagi K-2C]
gi|395423879|gb|EJF90067.1| 50S ribosomal protein L4 [Bartonella melophagi K-2C]
Length = 206
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + + G + ++ +F + R+DI+ RVVRWQLA+RQQG H ++ S+V+ T
Sbjct: 2 DLVIKTLD--GNEAGKLKVSKHIFGLAPREDILQRVVRWQLARRQQGAHQSQGRSDVART 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
G K ++QKGTGRARH + R PQ + KA P +
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQ---FRGGGKAHSPMAR 94
>gi|225387236|ref|ZP_03757000.1| hypothetical protein CLOSTASPAR_00988 [Clostridium asparagiforme
DSM 15981]
gi|225046654|gb|EEG56900.1| hypothetical protein CLOSTASPAR_00988 [Clostridium asparagiforme
DSM 15981]
Length = 206
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G M L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNMEGKEVGSMELNDAVFGVEVNEHLVHLAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|383481895|ref|YP_005390810.1| 50S ribosomal protein L4 [Rickettsia rhipicephali str.
3-7-female6-CWPP]
gi|378934234|gb|AFC72737.1| 50S ribosomal protein L4 [Rickettsia rhipicephali str.
3-7-female6-CWPP]
Length = 207
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + N++ G + L D+F V IR DII +V+ WQ AK G H TKT+SEV GT KKP
Sbjct: 5 ILSLANKEVGEISLNEDIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVLGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQ----GWYYN--ARSKAQKPCYKVEQEGAA-AWVEDCS 209
++QKGTG AR G+LR Q G + RS A K KV + G A E C+
Sbjct: 65 FKQKGTGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKCT 119
>gi|164686528|ref|ZP_02210556.1| hypothetical protein CLOBAR_00095 [Clostridium bartlettii DSM
16795]
gi|164604397|gb|EDQ97862.1| 50S ribosomal protein L4 [Clostridium bartlettii DSM 16795]
Length = 207
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L+ VF V + + +++ VV+ QLA ++QGT S KT +EV G G+K
Sbjct: 4 LNVLNIQGQNVGEIELSDAVFGVEVNEHVLYEVVKNQLANKRQGTQSAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PWRQKGTGRAR G++R Q W + A KP
Sbjct: 64 PWRQKGTGRARQGSIRAVQ-WIGGGVAFAPKP 94
>gi|50955565|ref|YP_062853.1| 50S ribosomal protein L4 [Leifsonia xyli subsp. xyli str. CTCB07]
gi|81612625|sp|Q6ACZ6.1|RL4_LEIXX RecName: Full=50S ribosomal protein L4
gi|50952047|gb|AAT89748.1| 50S ribosomal protein L4 [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 221
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V + + G + L +FDV +IH+VV QLA +QGTH TK EVSG G+K
Sbjct: 5 IDVVDLKGKKAGSIELPDSLFDVQTNIPLIHQVVTAQLAAARQGTHKTKNRGEVSGAGRK 64
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P++QKGTGRAR G++R PQ
Sbjct: 65 PFKQKGTGRARQGSIRAPQ 83
>gi|342215804|ref|ZP_08708451.1| 50S ribosomal protein L4 [Peptoniphilus sp. oral taxon 375 str.
F0436]
gi|341586694|gb|EGS30094.1| 50S ribosomal protein L4 [Peptoniphilus sp. oral taxon 375 str.
F0436]
Length = 206
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 47/64 (73%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L D+FDV + + ++ VV+ LA R+QGT S KT +EV G G+KPWRQKGTGRAR G++
Sbjct: 19 LKKDIFDVEVNEHAVYLVVKNILANRRQGTQSAKTRAEVRGGGRKPWRQKGTGRARQGSI 78
Query: 176 RGPQ 179
R PQ
Sbjct: 79 RSPQ 82
>gi|111023097|ref|YP_706069.1| 50S ribosomal protein L4 [Rhodococcus jostii RHA1]
gi|397736517|ref|ZP_10503199.1| 50S ribosomal protein L4 [Rhodococcus sp. JVH1]
gi|110822627|gb|ABG97911.1| 50S ribosomal protein L4 [Rhodococcus jostii RHA1]
gi|396927707|gb|EJI94934.1| 50S ribosomal protein L4 [Rhodococcus sp. JVH1]
Length = 229
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 48/68 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTH+TKT EV G GKKP+RQKGTGRAR
Sbjct: 24 GTVDLPAEIFDAPANIALLHQVVVAQLAAARQGTHATKTRGEVRGGGKKPYRQKGTGRAR 83
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 84 QGSTRAPQ 91
>gi|419961176|ref|ZP_14477185.1| 50S ribosomal protein L4 [Rhodococcus opacus M213]
gi|424851585|ref|ZP_18275982.1| 50S ribosomal protein L4 [Rhodococcus opacus PD630]
gi|432336150|ref|ZP_19587680.1| 50S ribosomal protein L4 [Rhodococcus wratislaviensis IFP 2016]
gi|356666250|gb|EHI46321.1| 50S ribosomal protein L4 [Rhodococcus opacus PD630]
gi|414573497|gb|EKT84181.1| 50S ribosomal protein L4 [Rhodococcus opacus M213]
gi|430776918|gb|ELB92311.1| 50S ribosomal protein L4 [Rhodococcus wratislaviensis IFP 2016]
Length = 229
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 48/68 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTH+TKT EV G GKKP+RQKGTGRAR
Sbjct: 24 GTVDLPAEIFDAPANIALLHQVVVAQLAAARQGTHATKTRGEVRGGGKKPYRQKGTGRAR 83
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 84 QGSTRAPQ 91
>gi|332669518|ref|YP_004452526.1| 50S ribosomal protein L4/L1e [Cellulomonas fimi ATCC 484]
gi|332338556|gb|AEE45139.1| ribosomal protein L4/L1e [Cellulomonas fimi ATCC 484]
Length = 229
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 51/81 (62%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V + + G L DVFDV +IH+VV QLA +QGTH TKT EV G G
Sbjct: 5 LTVDVLDPQGKKAGQAELPADVFDVQTNVPLIHQVVVAQLAAARQGTHDTKTRGEVRGGG 64
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KKP++QKGTGRAR G+ R PQ
Sbjct: 65 KKPYKQKGTGRARQGSTRAPQ 85
>gi|333991977|ref|YP_004524591.1| 50S ribosomal protein L4 [Mycobacterium sp. JDM601]
gi|333487945|gb|AEF37337.1| 50S ribosomal protein L4 RplD [Mycobacterium sp. JDM601]
Length = 225
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 53/81 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + + G + L ++FD P ++H+VV QLA +QGTHSTKT EV G G
Sbjct: 9 LKIDVKSPDGKKSGSVELPAELFDAPANIALMHQVVIAQLAAARQGTHSTKTRGEVRGGG 68
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
+KP+RQKGTGRAR G+ R PQ
Sbjct: 69 RKPYRQKGTGRARQGSTRAPQ 89
>gi|433654100|ref|YP_007297808.1| 50S ribosomal protein L4, bacterial/organelle
[Thermoanaerobacterium thermosaccharolyticum M0795]
gi|433292289|gb|AGB18111.1| 50S ribosomal protein L4, bacterial/organelle
[Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 206
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G M L+ +VF V + ++H V LA ++QGTHSTK EV G G K
Sbjct: 4 VAVYNINGEQIGEMELSDNVFGVEVNVPVMHEAVLNYLASQRQGTHSTKRRGEVRGGGIK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G++R PQ
Sbjct: 64 PWRQKGTGRARQGSIRAPQ 82
>gi|126724862|ref|ZP_01740705.1| 50S ribosomal protein L4 [Rhodobacterales bacterium HTCC2150]
gi|126706026|gb|EBA05116.1| 50S ribosomal protein L4 [Rhodobacteraceae bacterium HTCC2150]
Length = 206
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 50/78 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + G + LA D+F + R DI+HRVVR+QLAKRQ GTH KT SEV + KK
Sbjct: 3 LDVIKLDGKKAGSVDLAEDLFGLEARADILHRVVRYQLAKRQAGTHKVKTRSEVKYSTKK 62
Query: 161 PWRQKGTGRARHGTLRGP 178
+RQKGTG ARHG P
Sbjct: 63 IYRQKGTGGARHGARSAP 80
>gi|386841880|ref|YP_006246938.1| 50S ribosomal protein L4 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374102181|gb|AEY91065.1| 50S ribosomal protein L4 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451795174|gb|AGF65223.1| 50S ribosomal protein L4 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 217
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 48/71 (67%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
E G + L ++FD + +IH+VV QLA +QGTH TKT EV G GKKP+RQKGTG
Sbjct: 12 EKAGSVELPAEIFDAKVSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKKPYRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G+ R PQ
Sbjct: 72 RARQGSTRAPQ 82
>gi|317125871|ref|YP_004099983.1| 50S ribosomal protein L4P [Intrasporangium calvum DSM 43043]
gi|315589959|gb|ADU49256.1| LSU ribosomal protein L4P [Intrasporangium calvum DSM 43043]
Length = 212
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 46/64 (71%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L D+FDV +IH+VV QLA +QGTHSTKT EV G G+KP+RQKGTGRAR G+
Sbjct: 11 LPADIFDVQTNIPLIHQVVVAQLAAARQGTHSTKTRGEVRGGGRKPYRQKGTGRARQGST 70
Query: 176 RGPQ 179
R PQ
Sbjct: 71 RAPQ 74
>gi|296168558|ref|ZP_06850362.1| 50S ribosomal protein L4 [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896621|gb|EFG76260.1| 50S ribosomal protein L4 [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 217
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 49/69 (71%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
+G + L ++FD P ++H+VV Q A +QGTHSTKT EVSG G+KP+RQKGTGRA
Sbjct: 15 EGSIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGGRKPYRQKGTGRA 74
Query: 171 RHGTLRGPQ 179
R G+ R PQ
Sbjct: 75 RQGSTRAPQ 83
>gi|414174076|ref|ZP_11428703.1| 50S ribosomal protein L4 [Afipia broomeae ATCC 49717]
gi|410890710|gb|EKS38509.1| 50S ribosomal protein L4 [Afipia broomeae ATCC 49717]
Length = 206
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 54/81 (66%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT + G + L+ ++F + RKD+I RVV WQLAKRQ GTH K +E+ TG
Sbjct: 1 MELKVTTLEGKAAGSVQLSDEIFGLEPRKDLIQRVVNWQLAKRQAGTHKAKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KK ++QKGTG ARHG+ R PQ
Sbjct: 61 KKMYKQKGTGGARHGSARVPQ 81
>gi|309812335|ref|ZP_07706090.1| 50S ribosomal protein L4 [Dermacoccus sp. Ellin185]
gi|308433640|gb|EFP57517.1| 50S ribosomal protein L4 [Dermacoccus sp. Ellin185]
Length = 214
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 47/68 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L D+FDV +IH+VV QLA +QGTH TKT EV G G+KP+RQKGTGRAR
Sbjct: 15 GSVELPADIFDVATNVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGRKPYRQKGTGRAR 74
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 75 QGSTRAPQ 82
>gi|418247031|ref|ZP_12873417.1| 50S ribosomal protein L4 [Mycobacterium abscessus 47J26]
gi|353451524|gb|EHB99917.1| 50S ribosomal protein L4 [Mycobacterium abscessus 47J26]
Length = 218
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTHSTKT VSG GKKP+RQKGTGRAR
Sbjct: 19 GSIELPAELFDAPANIALLHQVVTAQLAAGRQGTHSTKTRGLVSGGGKKPYRQKGTGRAR 78
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 79 QGSTRAPQ 86
>gi|422012932|ref|ZP_16359568.1| 50S ribosomal protein L4 [Actinomyces georgiae F0490]
gi|394751874|gb|EJF35613.1| 50S ribosomal protein L4 [Actinomyces georgiae F0490]
Length = 214
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 53/79 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + + + L ++FDVP ++H+VV QLA +QGTHSTKT +VSG G+K
Sbjct: 7 VDVVDLKGKKAATVDLPAEIFDVPTNIPLMHQVVVAQLAAARQGTHSTKTRGQVSGGGRK 66
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTG AR G++R PQ
Sbjct: 67 PFRQKGTGNARQGSIRAPQ 85
>gi|419708878|ref|ZP_14236346.1| 50S ribosomal protein L4 [Mycobacterium abscessus M93]
gi|419715806|ref|ZP_14243206.1| 50S ribosomal protein L4 [Mycobacterium abscessus M94]
gi|382942306|gb|EIC66622.1| 50S ribosomal protein L4 [Mycobacterium abscessus M94]
gi|382942759|gb|EIC67073.1| 50S ribosomal protein L4 [Mycobacterium abscessus M93]
Length = 218
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTHSTKT VSG GKKP+RQKGTGRAR
Sbjct: 19 GSIELPAELFDAPANIALLHQVVTAQLAAGRQGTHSTKTRGLVSGGGKKPYRQKGTGRAR 78
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 79 QGSTRAPQ 86
>gi|338975038|ref|ZP_08630393.1| LSU ribosomal protein L4p [Bradyrhizobiaceae bacterium SG-6C]
gi|414167350|ref|ZP_11423579.1| 50S ribosomal protein L4 [Afipia clevelandensis ATCC 49720]
gi|338231637|gb|EGP06772.1| LSU ribosomal protein L4p [Bradyrhizobiaceae bacterium SG-6C]
gi|410891167|gb|EKS38965.1| 50S ribosomal protein L4 [Afipia clevelandensis ATCC 49720]
Length = 206
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 54/81 (66%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT + G + L+ ++F + RKD+I RVV WQLAKRQ GTH K +EV TG
Sbjct: 1 MELKVTTLEGKAVGSVQLSDEIFGLEPRKDLIQRVVNWQLAKRQAGTHKAKGRAEVWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KK ++QKGTG ARHG+ R PQ
Sbjct: 61 KKMYKQKGTGGARHGSARVPQ 81
>gi|15828001|ref|NP_302264.1| 50S ribosomal protein L4 [Mycobacterium leprae TN]
gi|221230478|ref|YP_002503894.1| 50S ribosomal protein L4 [Mycobacterium leprae Br4923]
gi|3122749|sp|O32982.1|RL4_MYCLE RecName: Full=50S ribosomal protein L4
gi|254803747|sp|B8ZSB8.1|RL4_MYCLB RecName: Full=50S ribosomal protein L4
gi|2344834|emb|CAB11436.1| ribosomal protein L4 [Mycobacterium leprae]
gi|13093554|emb|CAC30816.1| 50S ribosomal protein L4 [Mycobacterium leprae]
gi|219933585|emb|CAR71958.1| 50S ribosomal protein L4 [Mycobacterium leprae Br4923]
Length = 230
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 49/68 (72%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV Q A +QGTHSTKT +VSG G+KP+RQKGTGRAR
Sbjct: 25 GTIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRGDVSGGGRKPYRQKGTGRAR 84
Query: 172 HGTLRGPQ 179
G++R PQ
Sbjct: 85 QGSMRAPQ 92
>gi|365871757|ref|ZP_09411296.1| 50S ribosomal protein L4 [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|414582551|ref|ZP_11439691.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-1215]
gi|420879257|ref|ZP_15342624.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0304]
gi|420884795|ref|ZP_15348155.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0421]
gi|420891410|ref|ZP_15354757.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0422]
gi|420896257|ref|ZP_15359596.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0708]
gi|420900188|ref|ZP_15363519.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0817]
gi|420905028|ref|ZP_15368346.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-1212]
gi|420973381|ref|ZP_15436572.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0921]
gi|421050850|ref|ZP_15513844.1| 50S ribosomal protein L4 [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|363994097|gb|EHM15318.1| 50S ribosomal protein L4 [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|392078670|gb|EIU04497.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0422]
gi|392080558|gb|EIU06384.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0421]
gi|392084166|gb|EIU09991.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0304]
gi|392095569|gb|EIU21364.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0708]
gi|392097549|gb|EIU23343.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0817]
gi|392102932|gb|EIU28718.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-1212]
gi|392117703|gb|EIU43471.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-1215]
gi|392161264|gb|EIU86954.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0921]
gi|392239453|gb|EIV64946.1| 50S ribosomal protein L4 [Mycobacterium massiliense CCUG 48898]
Length = 213
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTHSTKT VSG GKKP+RQKGTGRAR
Sbjct: 14 GSIELPAELFDAPANIALLHQVVTAQLAAGRQGTHSTKTRGLVSGGGKKPYRQKGTGRAR 73
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 74 QGSTRAPQ 81
>gi|410867095|ref|YP_006981706.1| 50S ribosomal protein L4 [Propionibacterium acidipropionici ATCC
4875]
gi|410823736|gb|AFV90351.1| 50S ribosomal protein L4 [Propionibacterium acidipropionici ATCC
4875]
Length = 297
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 55/85 (64%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ ++ I V + G + L GDVFDV +IH+VV Q A +QGTHSTKT EV
Sbjct: 1 MSENKTIDVLTAKGKKSGSVELPGDVFDVATNVPLIHQVVVAQQAAARQGTHSTKTRGEV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
+G GKKPWRQKGTGRAR G+ R PQ
Sbjct: 61 AGGGKKPWRQKGTGRARQGSTRSPQ 85
>gi|397680313|ref|YP_006521848.1| 50S ribosomal protein L4 [Mycobacterium massiliense str. GO 06]
gi|420933053|ref|ZP_15396328.1| 50S ribosomal protein L4 [Mycobacterium massiliense 1S-151-0930]
gi|420937892|ref|ZP_15401161.1| 50S ribosomal protein L4 [Mycobacterium massiliense 1S-152-0914]
gi|420943315|ref|ZP_15406571.1| 50S ribosomal protein L4 [Mycobacterium massiliense 1S-153-0915]
gi|420947102|ref|ZP_15410352.1| 50S ribosomal protein L4 [Mycobacterium massiliense 1S-154-0310]
gi|420953464|ref|ZP_15416706.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-0626]
gi|420957637|ref|ZP_15420871.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-0107]
gi|420963166|ref|ZP_15426390.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-1231]
gi|420993582|ref|ZP_15456728.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-0307]
gi|420999357|ref|ZP_15462492.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-0912-R]
gi|421003880|ref|ZP_15467002.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-0912-S]
gi|392137812|gb|EIU63549.1| 50S ribosomal protein L4 [Mycobacterium massiliense 1S-151-0930]
gi|392143407|gb|EIU69132.1| 50S ribosomal protein L4 [Mycobacterium massiliense 1S-152-0914]
gi|392148412|gb|EIU74130.1| 50S ribosomal protein L4 [Mycobacterium massiliense 1S-153-0915]
gi|392152377|gb|EIU78084.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-0626]
gi|392154132|gb|EIU79838.1| 50S ribosomal protein L4 [Mycobacterium massiliense 1S-154-0310]
gi|392178139|gb|EIV03792.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-0912-R]
gi|392179684|gb|EIV05336.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-0307]
gi|392192583|gb|EIV18207.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-0912-S]
gi|392246079|gb|EIV71556.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-1231]
gi|392247363|gb|EIV72839.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-0107]
gi|395458578|gb|AFN64241.1| 50S ribosomal protein L4 [Mycobacterium massiliense str. GO 06]
Length = 213
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTHSTKT VSG GKKP+RQKGTGRAR
Sbjct: 14 GSIELPAELFDAPANIALLHQVVTAQLAAGRQGTHSTKTRGLVSGGGKKPYRQKGTGRAR 73
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 74 QGSTRAPQ 81
>gi|359407984|ref|ZP_09200457.1| ribosomal protein L4 [SAR116 cluster alpha proteobacterium HIMB100]
gi|356677050|gb|EHI49398.1| ribosomal protein L4 [SAR116 cluster alpha proteobacterium HIMB100]
Length = 205
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 48/74 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N KG + LA VF + R DI+ RVV+WQLAKR+ GTH K SEVS TG K
Sbjct: 3 VDVKTIDNRKKGDIELADSVFGIEPRADIVARVVKWQLAKRRAGTHKVKGRSEVSKTGAK 62
Query: 161 PWRQKGTGRARHGT 174
+RQKGTGRAR G
Sbjct: 63 MFRQKGTGRARAGN 76
>gi|350565593|ref|ZP_08934344.1| 50S ribosomal protein L4 [Peptoniphilus indolicus ATCC 29427]
gi|348663600|gb|EGY80162.1| 50S ribosomal protein L4 [Peptoniphilus indolicus ATCC 29427]
Length = 207
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E+ + L ++FD+ + + ++ VV+ LA ++QGT S KT SEV G G+K
Sbjct: 4 VQVINMNGENISEVELNEEIFDIEVNEHAVYLVVKNILANKRQGTKSAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G++R PQ
Sbjct: 64 PWRQKGTGRARQGSIRSPQ 82
>gi|406573628|ref|ZP_11049375.1| 50S ribosomal protein L4P [Janibacter hoylei PVAS-1]
gi|404556946|gb|EKA62401.1| 50S ribosomal protein L4P [Janibacter hoylei PVAS-1]
Length = 217
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 50/68 (73%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDV + +IH+VV QLA +QGTH+TKT ++V G G+KP+RQKGTGRAR
Sbjct: 15 GTVELPAEIFDVAVNVPLIHQVVVAQLAAARQGTHATKTRADVRGGGRKPYRQKGTGRAR 74
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 75 QGSTRAPQ 82
>gi|154483186|ref|ZP_02025634.1| hypothetical protein EUBVEN_00887 [Eubacterium ventriosum ATCC
27560]
gi|149735994|gb|EDM51880.1| 50S ribosomal protein L4 [Eubacterium ventriosum ATCC 27560]
Length = 206
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + L+ VF V + + ++H+ V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVLNMEGSEVGTIELSDAVFGVEVNEHLVHQAVLSQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|435852976|ref|YP_007314295.1| 50S ribosomal protein L4, bacterial/organelle [Halobacteroides
halobius DSM 5150]
gi|433669387|gb|AGB40202.1| 50S ribosomal protein L4, bacterial/organelle [Halobacteroides
halobius DSM 5150]
Length = 209
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+P+ + + G + L ++FDV I ++++H V QLA ++ GT TKT +V G G+K
Sbjct: 4 LPLYDTEGQTVGNVDLNDEIFDVEINENVVHEAVTAQLAAKRAGTAKTKTRGQVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRARHG++R P
Sbjct: 64 PWRQKGTGRARHGSIRSP 81
>gi|407278740|ref|ZP_11107210.1| 50S ribosomal protein L4 [Rhodococcus sp. P14]
gi|452954079|gb|EME59484.1| 50S ribosomal protein L4 [Rhodococcus ruber BKS 20-38]
Length = 227
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V + G + L ++FD P ++H+VV QLA +QGTH+TKT EV G G
Sbjct: 10 LTLDVKAPGGQTNGTVDLPAEIFDAPANIALLHQVVVAQLAAARQGTHATKTRGEVRGGG 69
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
+KP+RQKGTGRAR G+ R PQ
Sbjct: 70 RKPYRQKGTGRARQGSTRAPQ 90
>gi|453075557|ref|ZP_21978343.1| 50S ribosomal protein L4 [Rhodococcus triatomae BKS 15-14]
gi|452762983|gb|EME21270.1| 50S ribosomal protein L4 [Rhodococcus triatomae BKS 15-14]
Length = 223
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 51/81 (62%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V N G + L ++FD ++H+VV QLA +QGTHSTKT EV G G
Sbjct: 8 LTLDVRNADGGTNGTVDLPAEIFDAQANIALMHQVVVAQLAAARQGTHSTKTRGEVRGGG 67
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KKP+RQKGTGRAR G+ R PQ
Sbjct: 68 KKPYRQKGTGRARQGSTRAPQ 88
>gi|260589278|ref|ZP_05855191.1| ribosomal protein L4/L1 family protein [Blautia hansenii DSM 20583]
gi|331082684|ref|ZP_08331807.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 6_1_63FAA]
gi|260540359|gb|EEX20928.1| ribosomal protein L4/L1 family protein [Blautia hansenii DSM 20583]
gi|330400303|gb|EGG79945.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 6_1_63FAA]
Length = 206
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 48/79 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G M L VF V I ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVYNMEGKEVGTMELNDAVFGVEINDHLVHLAVVRQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|169630899|ref|YP_001704548.1| 50S ribosomal protein L4 [Mycobacterium abscessus ATCC 19977]
gi|418421923|ref|ZP_12995096.1| 50S ribosomal protein L4 [Mycobacterium abscessus subsp. bolletii
BD]
gi|420865311|ref|ZP_15328700.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0303]
gi|420870101|ref|ZP_15333483.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0726-RA]
gi|420874547|ref|ZP_15337923.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0726-RB]
gi|420911456|ref|ZP_15374768.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-0125-R]
gi|420917911|ref|ZP_15381214.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-0125-S]
gi|420923077|ref|ZP_15386373.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-0728-S]
gi|420928737|ref|ZP_15392017.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-1108]
gi|420968347|ref|ZP_15431551.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0810-R]
gi|420979078|ref|ZP_15442255.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-0212]
gi|420984462|ref|ZP_15447629.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-0728-R]
gi|420989629|ref|ZP_15452785.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0206]
gi|421008605|ref|ZP_15471715.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0119-R]
gi|421014514|ref|ZP_15477590.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0122-R]
gi|421019377|ref|ZP_15482434.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0122-S]
gi|421024384|ref|ZP_15487428.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0731]
gi|421030166|ref|ZP_15493197.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0930-R]
gi|421035420|ref|ZP_15498438.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0930-S]
gi|421041871|ref|ZP_15504879.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0116-R]
gi|421044899|ref|ZP_15507899.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0116-S]
gi|169242866|emb|CAM63894.1| 50S ribosomal protein L4 [Mycobacterium abscessus]
gi|363995839|gb|EHM17056.1| 50S ribosomal protein L4 [Mycobacterium abscessus subsp. bolletii
BD]
gi|392064027|gb|EIT89876.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0303]
gi|392066022|gb|EIT91870.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0726-RB]
gi|392069571|gb|EIT95418.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0726-RA]
gi|392110802|gb|EIU36572.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-0125-S]
gi|392113450|gb|EIU39219.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-0125-R]
gi|392127730|gb|EIU53480.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-0728-S]
gi|392129855|gb|EIU55602.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-1108]
gi|392163356|gb|EIU89045.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-0212]
gi|392169458|gb|EIU95136.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-0728-R]
gi|392183908|gb|EIV09559.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0206]
gi|392196753|gb|EIV22369.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0119-R]
gi|392198791|gb|EIV24402.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0122-R]
gi|392208007|gb|EIV33584.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0122-S]
gi|392211181|gb|EIV36747.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0731]
gi|392222799|gb|EIV48322.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0116-R]
gi|392223386|gb|EIV48908.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0930-R]
gi|392223915|gb|EIV49436.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0930-S]
gi|392234352|gb|EIV59850.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0116-S]
gi|392250854|gb|EIV76328.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0810-R]
Length = 213
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTHSTKT VSG GKKP+RQKGTGRAR
Sbjct: 14 GSIELPAELFDAPANIALLHQVVTAQLAAGRQGTHSTKTRGLVSGGGKKPYRQKGTGRAR 73
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 74 QGSTRAPQ 81
>gi|260438215|ref|ZP_05792031.1| ribosomal protein L4/L1 family protein [Butyrivibrio crossotus DSM
2876]
gi|292809407|gb|EFF68612.1| ribosomal protein L4/L1 family protein [Butyrivibrio crossotus DSM
2876]
Length = 206
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G M L VF V + ++H+ V QLA ++QGT S KT SEVSG G+K
Sbjct: 4 VSVYNIEGKVVGDMELNDAVFGVEVNTHLVHQAVVLQLANKRQGTQSAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|291518044|emb|CBK73265.1| LSU ribosomal protein L4P [Butyrivibrio fibrisolvens 16/4]
Length = 206
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 49/79 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G M L +F V I + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVFNMEGKEVGSMDLNDSIFAVEINEHLVHMAVVQQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|210623189|ref|ZP_03293628.1| hypothetical protein CLOHIR_01578 [Clostridium hiranonis DSM 13275]
gi|210153726|gb|EEA84732.1| hypothetical protein CLOHIR_01578 [Clostridium hiranonis DSM 13275]
Length = 207
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N ++ G + L +F+V + + +++ V+ QLA R+QGT S KT +EV G G+K
Sbjct: 4 INVMNINGQNVGEIELCDSIFNVEVNEHVLYEAVKCQLANRRQGTQSAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PW+QKGTGRAR G+ R Q W + A KP
Sbjct: 64 PWKQKGTGRARQGSTRSVQ-WVGGGVAFAPKP 94
>gi|429730004|ref|ZP_19264657.1| 50S ribosomal protein L4 [Corynebacterium durum F0235]
gi|429148599|gb|EKX91603.1| 50S ribosomal protein L4 [Corynebacterium durum F0235]
Length = 219
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 49/68 (72%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L D+FD ++H+VV QLA ++QGTHSTKT EVSG G+KP+RQKGTGRAR
Sbjct: 17 GQVELPADIFDREASIALMHQVVNAQLAAKRQGTHSTKTRGEVSGGGRKPFRQKGTGRAR 76
Query: 172 HGTLRGPQ 179
G++R P
Sbjct: 77 QGSIRAPH 84
>gi|49474403|ref|YP_032445.1| 50S ribosomal protein L4 [Bartonella quintana str. Toulouse]
gi|81646966|sp|Q6FZC3.1|RL4_BARQU RecName: Full=50S ribosomal protein L4
gi|49239907|emb|CAF26305.1| 50s ribosomal protein l4 [Bartonella quintana str. Toulouse]
Length = 206
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + + G + ++ +F + R+DI+ RVVRWQLA+ QQGTH ++ S+VS T
Sbjct: 2 DLVIRTLD--GNEAGRLKVSESIFGLVPREDILQRVVRWQLARHQQGTHHSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
G K ++QKGTGRARH + R PQ + KA P +
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQ---FRGGGKAHGPVVR 94
>gi|209165347|gb|ACI41235.1| ribosomal protein L4, partial [Mycobacterium abscessus subsp.
bolletii]
Length = 199
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTHSTKT VSG GKKP+RQKGTGRAR
Sbjct: 5 GSIELPAELFDAPANIALLHQVVTAQLAAGRQGTHSTKTRGLVSGGGKKPYRQKGTGRAR 64
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 65 QGSTRAPQ 72
>gi|403530689|ref|YP_006665218.1| 50S ribosomal protein L4 [Bartonella quintana RM-11]
gi|403232760|gb|AFR26503.1| 50S ribosomal protein L4 [Bartonella quintana RM-11]
Length = 206
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + + G + ++ +F + R+DI+ RVVRWQLA+ QQGTH ++ S+VS T
Sbjct: 2 DLVIRTLD--GNEAGRLKVSESIFGLIPREDILQRVVRWQLARHQQGTHHSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
G K ++QKGTGRARH + R PQ + KA P +
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQ---FRGGGKAHGPVVR 94
>gi|118591183|ref|ZP_01548582.1| 50S ribosomal protein L4 [Stappia aggregata IAM 12614]
gi|118436259|gb|EAV42901.1| 50S ribosomal protein L4 [Stappia aggregata IAM 12614]
Length = 206
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + ++ ++F + R D+IHRVVRWQLAKRQ GTH SEVSGT KK RQKG+G AR
Sbjct: 14 GSITVSDEIFGLEPRTDLIHRVVRWQLAKRQAGTHKALGRSEVSGTTKKFVRQKGSGGAR 73
Query: 172 HGTLRGPQ 179
HG + PQ
Sbjct: 74 HGNKKAPQ 81
>gi|320094579|ref|ZP_08026345.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319978494|gb|EFW10071.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 216
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 48/64 (75%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FDVP ++H+VV QLA +QGTHSTKT +VSG G+KP+RQKGTG AR G++
Sbjct: 24 LPAEIFDVPTNIPLMHQVVVAQLAAARQGTHSTKTRGQVSGGGRKPFRQKGTGNARQGSI 83
Query: 176 RGPQ 179
R PQ
Sbjct: 84 RAPQ 87
>gi|209165351|gb|ACI41237.1| ribosomal protein L4, partial [Mycobacterium chelonae]
Length = 199
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTHSTKT VSG GKKP+RQKGTGRAR
Sbjct: 5 GSIELPAELFDAPANIALLHQVVTAQLAAGRQGTHSTKTRGLVSGGGKKPYRQKGTGRAR 64
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 65 QGSTRAPQ 72
>gi|283796558|ref|ZP_06345711.1| ribosomal protein L4/L1 family protein [Clostridium sp. M62/1]
gi|291075972|gb|EFE13336.1| 50S ribosomal protein L4 [Clostridium sp. M62/1]
gi|295092548|emb|CBK78655.1| LSU ribosomal protein L4P [Clostridium cf. saccharolyticum K10]
Length = 204
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 49/79 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGNEVGTLELNDAVFGVEVNEHLVHLAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRAPQ 82
>gi|238916266|ref|YP_002929783.1| 50S ribosomal protein L4 [Eubacterium eligens ATCC 27750]
gi|259491557|sp|C4Z2T1.1|RL4_EUBE2 RecName: Full=50S ribosomal protein L4
gi|238871626|gb|ACR71336.1| large subunit ribosomal protein L4 [Eubacterium eligens ATCC 27750]
Length = 206
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA +QGT S KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVGSIELNDAVFGVEVNEHLVHMAVVNQLANNRQGTQSAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|261338278|ref|ZP_05966162.1| ribosomal protein L4/L1 family protein [Bifidobacterium gallicum
DSM 20093]
gi|270276933|gb|EFA22787.1| ribosomal protein L4/L1 family protein [Bifidobacterium gallicum
DSM 20093]
Length = 220
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 6/91 (6%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVF-----DVPIRKDIIHRVVRWQLAKRQQGTHSTKTIS 152
++ + VT+ G + +VF +V +IH+VV QLA R+QGTH+TKT
Sbjct: 3 NVTLNVTDNQGNATGTIEAPAEVFGFTAEEVHAHVPLIHQVVNAQLAARRQGTHATKTRG 62
Query: 153 EVSGTGKKPWRQKGTGRARHGTLRGPQGWYY 183
VSG G+KPW+QKGTGRAR G++R PQ WY+
Sbjct: 63 MVSGGGRKPWKQKGTGRARQGSIRAPQ-WYH 92
>gi|418049931|ref|ZP_12688018.1| ribosomal protein L4/L1e [Mycobacterium rhodesiae JS60]
gi|353190836|gb|EHB56346.1| ribosomal protein L4/L1e [Mycobacterium rhodesiae JS60]
Length = 219
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 54/81 (66%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + G + L +FDV ++H+VV QLA ++QGTH+TKT ++VSG G
Sbjct: 3 LKIDVLTPGGKKDGTVELPAALFDVEPNIALMHQVVTAQLAAKRQGTHATKTRAQVSGGG 62
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KKP+RQKGTGRAR G+ R PQ
Sbjct: 63 KKPYRQKGTGRARQGSTRAPQ 83
>gi|154505168|ref|ZP_02041906.1| hypothetical protein RUMGNA_02681 [Ruminococcus gnavus ATCC 29149]
gi|336433163|ref|ZP_08612989.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 2_1_58FAA]
gi|153794647|gb|EDN77067.1| 50S ribosomal protein L4 [Ruminococcus gnavus ATCC 29149]
gi|336017125|gb|EGN46893.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 2_1_58FAA]
Length = 206
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L+ VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVGTIDLSDAVFGVEVNEHLVHMAVVSQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|374611456|ref|ZP_09684242.1| ribosomal protein L4/L1e [Mycobacterium tusciae JS617]
gi|373549166|gb|EHP75839.1| ribosomal protein L4/L1e [Mycobacterium tusciae JS617]
Length = 225
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 51/81 (62%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + G + L +FD ++H+VV QLA ++QGTHSTKT EV G G
Sbjct: 6 LKIDVHTPAGKKDGSVELPAALFDAEANIALMHQVVEAQLAAKRQGTHSTKTRGEVRGGG 65
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KKP+RQKGTGRAR G+ R PQ
Sbjct: 66 KKPYRQKGTGRARQGSTRAPQ 86
>gi|121997648|ref|YP_001002435.1| 50S ribosomal protein L4 [Halorhodospira halophila SL1]
gi|166234674|sp|A1WVC1.1|RL4_HALHL RecName: Full=50S ribosomal protein L4
gi|121589053|gb|ABM61633.1| LSU ribosomal protein L4P [Halorhodospira halophila SL1]
Length = 205
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + ++N E G + ++ FD P R+ ++H+VV LA + GT + KT SEV+G G
Sbjct: 1 MELKLSNEKGEAAGQLEVSDQAFDAPFRESLVHQVVTAHLAGARAGTKAQKTRSEVAGGG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
KKPWRQKGTG AR GT+R P W ++ A KP
Sbjct: 61 KKPWRQKGTGNARAGTIRSPL-WRGGGQTFAAKP 93
>gi|209165345|gb|ACI41234.1| ribosomal protein L4, partial [Mycobacterium abscessus subsp.
bolletii]
gi|209165349|gb|ACI41236.1| ribosomal protein L4, partial [Mycobacterium abscessus]
Length = 199
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTHSTKT VSG GKKP+RQKGTGRAR
Sbjct: 5 GSIELPAELFDAPANIALLHQVVTAQLAAGRQGTHSTKTRGLVSGGGKKPYRQKGTGRAR 64
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 65 QGSTRAPQ 72
>gi|291547983|emb|CBL21091.1| LSU ribosomal protein L4P [Ruminococcus sp. SR1/5]
Length = 206
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 48/79 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G M L VF V I + ++H V QLA +QGT KT SEV G G+K
Sbjct: 4 VTVYNMEGNEVGTMELNDAVFGVEINEHLVHLAVVRQLANNRQGTQKAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G++R PQ
Sbjct: 64 PWRQKGTGHARQGSIRAPQ 82
>gi|220921900|ref|YP_002497201.1| 50S ribosomal protein L4 [Methylobacterium nodulans ORS 2060]
gi|254803744|sp|B8IS86.1|RL4_METNO RecName: Full=50S ribosomal protein L4
gi|219946506|gb|ACL56898.1| ribosomal protein L4/L1e [Methylobacterium nodulans ORS 2060]
Length = 206
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+T D G + L +F + R D++ R VRWQLAKRQ GTH KT SE+S T KK +
Sbjct: 5 ITTLDGADAGSVELDEAIFGLEPRADLLQRCVRWQLAKRQAGTHKVKTRSEISRTTKKMY 64
Query: 163 RQKGTGRARHGTLRGPQ 179
+QKGTG ARHG PQ
Sbjct: 65 KQKGTGNARHGAASAPQ 81
>gi|229489366|ref|ZP_04383229.1| ribosomal protein L4/L1 family protein [Rhodococcus erythropolis
SK121]
gi|453068364|ref|ZP_21971643.1| 50S ribosomal protein L4 [Rhodococcus qingshengii BKS 20-40]
gi|226184457|dbj|BAH32561.1| 50S ribosomal protein L4 [Rhodococcus erythropolis PR4]
gi|229323463|gb|EEN89221.1| ribosomal protein L4/L1 family protein [Rhodococcus erythropolis
SK121]
gi|452766014|gb|EME24265.1| 50S ribosomal protein L4 [Rhodococcus qingshengii BKS 20-40]
Length = 224
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 48/68 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTHSTKT +V G GKKP+RQKGTGRAR
Sbjct: 21 GTVDLPAEIFDAPANIALLHQVVVAQLAAARQGTHSTKTRGDVRGGGKKPYRQKGTGRAR 80
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 81 QGSTRAPQ 88
>gi|383761364|ref|YP_005440346.1| 50S ribosomal protein L4 [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381381632|dbj|BAL98448.1| 50S ribosomal protein L4 [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 211
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 48/68 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ VF PI ++H+ + QLA + GTH TKT SEVSG G+KPWRQKGTGRAR
Sbjct: 7 GEVELSDAVFAAPIHTAVMHQALMRQLANARLGTHDTKTRSEVSGGGRKPWRQKGTGRAR 66
Query: 172 HGTLRGPQ 179
G++R PQ
Sbjct: 67 QGSIRAPQ 74
>gi|302669962|ref|YP_003829922.1| 50S ribosomal protein L4 [Butyrivibrio proteoclasticus B316]
gi|302394435|gb|ADL33340.1| ribosomal protein L4 RplD [Butyrivibrio proteoclasticus B316]
Length = 207
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L+ +F V + + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVYNMEGKEVGKIDLSDAIFGVEVNEHLVHMAVLQQLADNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G++R PQ
Sbjct: 64 PWRQKGTGHARQGSIRAPQ 82
>gi|403510152|ref|YP_006641790.1| 50S ribosomal protein L4 [Nocardiopsis alba ATCC BAA-2165]
gi|402799443|gb|AFR06853.1| 50S ribosomal protein L4 [Nocardiopsis alba ATCC BAA-2165]
Length = 223
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N KG + L VF + +IH+VV QLA +QGTH+TKT EV G GKK
Sbjct: 4 IEVKNPEGGSKGSVELPESVFAQQVSIPLIHQVVNGQLAAARQGTHATKTRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G++R PQ
Sbjct: 64 PYRQKGTGRARQGSIRAPQ 82
>gi|229818239|ref|ZP_04448521.1| hypothetical protein BIFANG_03537 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229784490|gb|EEP20604.1| hypothetical protein BIFANG_03537 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 219
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Query: 129 IIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQGWYY 183
+IH+VV QLA +QGTH+TKT + VSG GKKPW+QKGTGRAR G++R PQ WY+
Sbjct: 39 LIHQVVVAQLAAARQGTHATKTRANVSGGGKKPWKQKGTGRARQGSIRAPQ-WYH 92
>gi|51894209|ref|YP_076900.1| 50S ribosomal protein L4 [Symbiobacterium thermophilum IAM 14863]
gi|81610342|sp|Q67JU4.1|RL4_SYMTH RecName: Full=50S ribosomal protein L4
gi|51857898|dbj|BAD42056.1| 50S ribosomal protein L4 [Symbiobacterium thermophilum IAM 14863]
Length = 207
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N++ G + L+ VF + ++H VV+ LA ++QGT TKT +EVSG
Sbjct: 1 MPKVAVYNKEGATVGEITLSDAVFGAEVNPGLLHEVVQMYLANKRQGTADTKTRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGP 178
G+KPWRQKGTGRARHG++R P
Sbjct: 61 GRKPWRQKGTGRARHGSIRSP 81
>gi|375098811|ref|ZP_09745074.1| 50S ribosomal protein L4, bacterial/organelle [Saccharomonospora
cyanea NA-134]
gi|374659543|gb|EHR59421.1| 50S ribosomal protein L4, bacterial/organelle [Saccharomonospora
cyanea NA-134]
Length = 227
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 50/71 (70%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
E +G + L ++FDV ++H+VV Q+A +QGTH TKT EV G G+KP+RQKGTG
Sbjct: 13 EAQGTVELPAEIFDVQANIPLMHQVVVAQMAAARQGTHDTKTRGEVRGGGRKPYRQKGTG 72
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 73 RARQGSVRAPQ 83
>gi|337290016|ref|YP_004629037.1| 50S ribosomal protein L4 [Corynebacterium ulcerans BR-AD22]
gi|384514938|ref|YP_005710030.1| 50S ribosomal protein L4 [Corynebacterium ulcerans 809]
gi|397653195|ref|YP_006493878.1| 50S ribosomal protein L4 [Corynebacterium ulcerans 0102]
gi|334696139|gb|AEG80936.1| 50S ribosomal protein L4 [Corynebacterium ulcerans 809]
gi|334698322|gb|AEG83118.1| 50S ribosomal protein L4 [Corynebacterium ulcerans BR-AD22]
gi|393402151|dbj|BAM26643.1| 50S ribosomal protein L4 [Corynebacterium ulcerans 0102]
Length = 217
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 55/82 (67%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V + G + L ++FD ++H+VV QLA ++QGTHSTKT +EVSG
Sbjct: 3 NLKLDVLTAEGKTDGQVELPAEIFDREASVALMHQVVNAQLAAKRQGTHSTKTRAEVSGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KP+RQKGTGRAR G++R P
Sbjct: 63 GRKPFRQKGTGRARQGSIRAPH 84
>gi|323483300|ref|ZP_08088690.1| hypothetical protein HMPREF9474_00439 [Clostridium symbiosum
WAL-14163]
gi|323691202|ref|ZP_08105478.1| ribosomal protein L4/L1 family protein [Clostridium symbiosum
WAL-14673]
gi|355626527|ref|ZP_09048802.1| 50S ribosomal protein L4 [Clostridium sp. 7_3_54FAA]
gi|323403398|gb|EGA95706.1| hypothetical protein HMPREF9474_00439 [Clostridium symbiosum
WAL-14163]
gi|323504721|gb|EGB20507.1| ribosomal protein L4/L1 family protein [Clostridium symbiosum
WAL-14673]
gi|354820847|gb|EHF05252.1| 50S ribosomal protein L4 [Clostridium sp. 7_3_54FAA]
Length = 206
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 49/79 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGNEVGTLELNDSVFGVEVNEHLVHLAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|402813925|ref|ZP_10863519.1| 50S ribosomal protein L4 [Paenibacillus alvei DSM 29]
gi|402507772|gb|EJW18293.1| 50S ribosomal protein L4 [Paenibacillus alvei DSM 29]
Length = 207
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 49/79 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L+ VF + K ++H V QLA +QGTH K SEVSG G+K
Sbjct: 4 VAVYNMSGAQVGEIELSDSVFGIEPNKHVLHDAVVMQLASMRQGTHKVKNRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PW+QKGTGRAR G++R PQ
Sbjct: 64 PWKQKGTGRARQGSIRSPQ 82
>gi|307244773|ref|ZP_07526874.1| ribosomal protein L4/L1 family protein [Peptostreptococcus stomatis
DSM 17678]
gi|306491871|gb|EFM63923.1| ribosomal protein L4/L1 family protein [Peptostreptococcus stomatis
DSM 17678]
Length = 207
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N ++ G + L +F++ + +++ V+ QLA ++QGT S KT +EV G G+K
Sbjct: 4 INVLNVSGQNVGEIELNDSIFNIEVNAHVLYEAVKCQLANKRQGTQSAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PWRQKGTGRAR G++R Q W + A KP
Sbjct: 64 PWRQKGTGRARQGSIRSVQ-WVGGGVAFAPKP 94
>gi|145596433|ref|YP_001160730.1| 50S ribosomal protein L4 [Salinispora tropica CNB-440]
gi|145305770|gb|ABP56352.1| LSU ribosomal protein L4P [Salinispora tropica CNB-440]
Length = 216
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 48/68 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L D+FD ++H+VV QLA +QGTH TKT EV+G GKKP++QKGTGRAR
Sbjct: 15 GSVELPADIFDAQANIALMHQVVVAQLAAARQGTHKTKTRGEVAGGGKKPYKQKGTGRAR 74
Query: 172 HGTLRGPQ 179
G++R PQ
Sbjct: 75 QGSIRAPQ 82
>gi|384564363|ref|ZP_10011467.1| 50S ribosomal protein L4, bacterial/organelle [Saccharomonospora
glauca K62]
gi|384520217|gb|EIE97412.1| 50S ribosomal protein L4, bacterial/organelle [Saccharomonospora
glauca K62]
Length = 227
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 50/71 (70%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
E +G + L ++FDV ++H+VV Q+A +QGTH TKT EV G G+KP+RQKGTG
Sbjct: 13 EAQGTVELPAEIFDVQANIPLMHQVVVAQMAAARQGTHDTKTRGEVRGGGRKPYRQKGTG 72
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 73 RARQGSVRAPQ 83
>gi|355681921|ref|ZP_09062209.1| 50S ribosomal protein L4 [Clostridium citroniae WAL-17108]
gi|354811332|gb|EHE95965.1| 50S ribosomal protein L4 [Clostridium citroniae WAL-17108]
Length = 206
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNMEGKEVGTLELNDAVFGVEVNEHLVHLAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|296268551|ref|YP_003651183.1| 50S ribosomal protein L4 [Thermobispora bispora DSM 43833]
gi|296091338|gb|ADG87290.1| ribosomal protein L4/L1e [Thermobispora bispora DSM 43833]
Length = 216
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 53/79 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V + G + L ++F + ++H+VV QLA R+QGTH+TKT +VSG GKK
Sbjct: 5 IDVLDANGAKAGTVELPEEIFGAKVNVPLMHQVVVAQLAARRQGTHATKTRGDVSGGGKK 64
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G++R PQ
Sbjct: 65 PYRQKGTGRARQGSIRAPQ 83
>gi|291521897|emb|CBK80190.1| LSU ribosomal protein L4P [Coprococcus catus GD/7]
Length = 206
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L VF V + ++++H+ V QLA +QGT S KT SEVSG G+K
Sbjct: 4 LSVYNIEGNQVGEIELNDAVFGVEVNENLMHKAVVAQLAASRQGTQSAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|407776106|ref|ZP_11123395.1| 50S ribosomal protein L4 [Thalassospira profundimaris WP0211]
gi|407280822|gb|EKF06389.1| 50S ribosomal protein L4 [Thalassospira profundimaris WP0211]
Length = 206
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 49/68 (72%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + LA D+F + +R+D++HR+V WQLAKR+ GTH K SEVS T KK RQKG+G AR
Sbjct: 14 GKIDLAEDIFGLEVRRDVLHRMVNWQLAKRRAGTHKVKEKSEVSATTKKFVRQKGSGGAR 73
Query: 172 HGTLRGPQ 179
HG+ + Q
Sbjct: 74 HGSRKAAQ 81
>gi|358446884|ref|ZP_09157423.1| 50S ribosomal protein L4 [Corynebacterium casei UCMA 3821]
gi|356607208|emb|CCE55775.1| 50S ribosomal protein L4 [Corynebacterium casei UCMA 3821]
Length = 221
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V + G + L ++FD + ++H+VV QLA +QGTHSTKT EV G
Sbjct: 3 NLKLDVKTAEGKTNGSVELPAEIFDAEVSIALMHQVVNAQLAAARQGTHSTKTRGEVRGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KP+RQKGTGRAR G++R P
Sbjct: 63 GRKPFRQKGTGRARQGSIRAPH 84
>gi|300857763|ref|YP_003782746.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis FRC41]
gi|375287929|ref|YP_005122470.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis
3/99-5]
gi|379714632|ref|YP_005302969.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis 316]
gi|383313531|ref|YP_005374386.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis
P54B96]
gi|384503951|ref|YP_005680621.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis 1002]
gi|384506040|ref|YP_005682709.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis C231]
gi|384508130|ref|YP_005684798.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis I19]
gi|385806797|ref|YP_005843194.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis 267]
gi|386739695|ref|YP_006212875.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis 31]
gi|387135897|ref|YP_005691877.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis
42/02-A]
gi|387137952|ref|YP_005693931.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis CIP
52.97]
gi|387139986|ref|YP_005695964.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis
1/06-A]
gi|389849699|ref|YP_006351934.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis 258]
gi|392399906|ref|YP_006436506.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis Cp162]
gi|300685217|gb|ADK28139.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis FRC41]
gi|302205501|gb|ADL09843.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis C231]
gi|302330056|gb|ADL20250.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis 1002]
gi|308275737|gb|ADO25636.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis I19]
gi|348606342|gb|AEP69615.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis
42/02-A]
gi|349734430|gb|AEQ05908.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis CIP
52.97]
gi|355391777|gb|AER68442.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis
1/06-A]
gi|371575218|gb|AEX38821.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis
3/99-5]
gi|377653338|gb|AFB71687.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis 316]
gi|380869032|gb|AFF21506.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis
P54B96]
gi|383804190|gb|AFH51269.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis 267]
gi|384476389|gb|AFH90185.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis 31]
gi|388247005|gb|AFK15996.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis 258]
gi|390530984|gb|AFM06713.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis Cp162]
Length = 217
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 55/82 (67%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V + G + L ++FD ++H+VV QLA ++QGTHSTKT +EVSG
Sbjct: 3 NLKLDVLTAEGKTDGQVELPAEIFDREASVALMHQVVNAQLAAKRQGTHSTKTRAEVSGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KP+RQKGTGRAR G++R P
Sbjct: 63 GRKPFRQKGTGRARQGSIRAPH 84
>gi|291562767|emb|CBL41583.1| LSU ribosomal protein L4P [butyrate-producing bacterium SS3/4]
Length = 206
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNMEGKEVGTIELNDAVFGVEVNEHLVHMAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|114764143|ref|ZP_01443381.1| 50S ribosomal protein L4, partial [Pelagibaca bermudensis HTCC2601]
gi|114543295|gb|EAU46311.1| 50S ribosomal protein L4 [Roseovarius sp. HTCC2601]
Length = 177
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD+ R DI+HRVVRWQ K Q GTH KT SEVS + KK +RQKGTG AR
Sbjct: 14 GEVELTDEIFDLEPRADILHRVVRWQRNKAQAGTHKVKTRSEVSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGP---QGWYYNA---RSKAQKPCYKVEQEG 200
HG+ + P +G Y RS A KV Q G
Sbjct: 74 HGSRKAPIFRKGGIYKGPTPRSHAHDLPKKVRQLG 108
>gi|296119210|ref|ZP_06837780.1| ribosomal protein L4/L1 family protein [Corynebacterium
ammoniagenes DSM 20306]
gi|295967836|gb|EFG81091.1| ribosomal protein L4/L1 family protein [Corynebacterium
ammoniagenes DSM 20306]
Length = 221
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V + G + L ++FD + ++H+VV QLA +QGTHSTKT EV G
Sbjct: 3 NLKLDVQTAEGKTNGSVELPAEIFDAEVSIALMHQVVNAQLAAARQGTHSTKTRGEVRGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KP+RQKGTGRAR G++R P
Sbjct: 63 GRKPFRQKGTGRARQGSIRAPH 84
>gi|387877768|ref|YP_006308072.1| 50S ribosomal protein L4 [Mycobacterium sp. MOTT36Y]
gi|443307552|ref|ZP_21037339.1| 50S ribosomal protein L4 [Mycobacterium sp. H4Y]
gi|386791226|gb|AFJ37345.1| 50S ribosomal protein L4 [Mycobacterium sp. MOTT36Y]
gi|442764920|gb|ELR82918.1| 50S ribosomal protein L4 [Mycobacterium sp. H4Y]
Length = 223
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 53/81 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + +G + L ++FD P ++H+VV Q A +QGTHSTKT +VSG G
Sbjct: 9 LKIDVKTPAGKVEGSIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRGDVSGGG 68
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
+KP+RQKGTGRAR G+ R PQ
Sbjct: 69 RKPYRQKGTGRARQGSTRAPQ 89
>gi|217976766|ref|YP_002360913.1| 50S ribosomal protein L4 [Methylocella silvestris BL2]
gi|254803745|sp|B8ELG2.1|RL4_METSB RecName: Full=50S ribosomal protein L4
gi|217502142|gb|ACK49551.1| ribosomal protein L4/L1e [Methylocella silvestris BL2]
Length = 206
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 56/81 (69%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I +T+ + G + L +F + R+D+I R+VR+QLAKR+ GTH TK +E++ TG
Sbjct: 1 MKIDITSLNGDSAGSIDLDDSIFGLEPRQDLIARMVRYQLAKRRAGTHKTKGRAEIARTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KK ++QKGTG ARHG+ R PQ
Sbjct: 61 KKLYKQKGTGSARHGSARVPQ 81
>gi|384918430|ref|ZP_10018507.1| 50S ribosomal protein L4 [Citreicella sp. 357]
gi|384467684|gb|EIE52152.1| 50S ribosomal protein L4 [Citreicella sp. 357]
Length = 205
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 59/106 (55%), Gaps = 6/106 (5%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L +FD+ R DI+HRVVRWQ K Q GTH KT SEVS + KK
Sbjct: 3 LDVINLDGSAAGEVELTDGIFDLEPRADILHRVVRWQRNKAQAGTHKVKTRSEVSYSTKK 62
Query: 161 PWRQKGTGRARHGTLRGP---QGWYYNA---RSKAQKPCYKVEQEG 200
+RQKGTG ARHG+ + P +G Y RS A + KV G
Sbjct: 63 IYRQKGTGGARHGSRKAPIFRKGGIYKGPTPRSHAHELPKKVRALG 108
>gi|254822786|ref|ZP_05227787.1| 50S ribosomal protein L4 [Mycobacterium intracellulare ATCC 13950]
gi|379756372|ref|YP_005345044.1| 50S ribosomal protein L4 [Mycobacterium intracellulare MOTT-02]
gi|406032656|ref|YP_006731548.1| 50S ribosomal protein L4 [Mycobacterium indicus pranii MTCC 9506]
gi|378806588|gb|AFC50723.1| 50S ribosomal protein L4 [Mycobacterium intracellulare MOTT-02]
gi|405131203|gb|AFS16458.1| 50S ribosomal protein L4 [Mycobacterium indicus pranii MTCC 9506]
Length = 223
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 53/81 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + +G + L ++FD P ++H+VV Q A +QGTHSTKT +VSG G
Sbjct: 9 LKIDVKTPAGKVEGSIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRGDVSGGG 68
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
+KP+RQKGTGRAR G+ R PQ
Sbjct: 69 RKPYRQKGTGRARQGSTRAPQ 89
>gi|403713406|ref|ZP_10939523.1| ribosomal protein L4 [Kineosphaera limosa NBRC 100340]
gi|403212492|dbj|GAB94206.1| ribosomal protein L4 [Kineosphaera limosa NBRC 100340]
Length = 215
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + G + L ++FDV +IH+VV QLA +QGTHSTKT E G G+K
Sbjct: 4 IDILDTTGGSNGTIELPAEIFDVQTNVPLIHQVVVAQLAAARQGTHSTKTRGETRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G++R PQ
Sbjct: 64 PYRQKGTGRARQGSVRAPQ 82
>gi|379763907|ref|YP_005350304.1| 50S ribosomal protein L4 [Mycobacterium intracellulare MOTT-64]
gi|378811849|gb|AFC55983.1| 50S ribosomal protein L4 [Mycobacterium intracellulare MOTT-64]
Length = 224
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 53/81 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + +G + L ++FD P ++H+VV Q A +QGTHSTKT +VSG G
Sbjct: 10 LKIDVKTPAGKVEGSIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRGDVSGGG 69
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
+KP+RQKGTGRAR G+ R PQ
Sbjct: 70 RKPYRQKGTGRARQGSTRAPQ 90
>gi|282882504|ref|ZP_06291125.1| ribosomal protein, L4/L1 family [Peptoniphilus lacrimalis 315-B]
gi|281297646|gb|EFA90121.1| ribosomal protein, L4/L1 family [Peptoniphilus lacrimalis 315-B]
Length = 207
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 47/61 (77%)
Query: 119 DVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGP 178
++F+ + + +++ VV+ LA R+QGTHS KT SEV G G+KPWRQKGTGRAR G++R P
Sbjct: 22 NIFNCDVNEHVVYLVVKNILANRRQGTHSAKTRSEVRGGGRKPWRQKGTGRARQGSIRSP 81
Query: 179 Q 179
Q
Sbjct: 82 Q 82
>gi|405376543|ref|ZP_11030497.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium sp. CF142]
gi|397326870|gb|EJJ31181.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium sp. CF142]
Length = 206
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V +D G + L+ +F + R+DI+ RV+RWQLAK+QQGTH K ++V TG
Sbjct: 1 MELNVKTLEGKDAGKVSLSEAIFGLEPREDILARVIRWQLAKKQQGTHQAKGRADVWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
K ++QKGTGRARH + R PQ + KA P +
Sbjct: 61 AKMYKQKGTGRARHHSARAPQ---FRGGGKAHGPVAR 94
>gi|239623348|ref|ZP_04666379.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522314|gb|EEQ62180.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 206
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNMEGKEVGTLELNDAVFGVEVNEHLVHLAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|441148601|ref|ZP_20964942.1| 50S ribosomal protein L4 [Streptomyces rimosus subsp. rimosus ATCC
10970]
gi|440619811|gb|ELQ82851.1| 50S ribosomal protein L4 [Streptomyces rimosus subsp. rimosus ATCC
10970]
Length = 216
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + + G + L ++FD + +IH+VV QLA +QGTH TKT EV G GKK
Sbjct: 4 IDILSPAGDKAGTVELPAEIFDAKVSIPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G+ R PQ
Sbjct: 64 PYRQKGTGRARQGSTRAPQ 82
>gi|160941068|ref|ZP_02088406.1| hypothetical protein CLOBOL_05961 [Clostridium bolteae ATCC
BAA-613]
gi|158436017|gb|EDP13784.1| hypothetical protein CLOBOL_05961 [Clostridium bolteae ATCC
BAA-613]
Length = 206
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNMEGKEVGALELNDAVFGVEVNEHLVHLAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|379749055|ref|YP_005339876.1| 50S ribosomal protein L4 [Mycobacterium intracellulare ATCC 13950]
gi|378801419|gb|AFC45555.1| 50S ribosomal protein L4 [Mycobacterium intracellulare ATCC 13950]
Length = 223
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 53/81 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + +G + L ++FD P ++H+VV Q A +QGTHSTKT +VSG G
Sbjct: 9 LKIDVKTPAGKVEGSIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRGDVSGGG 68
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
+KP+RQKGTGRAR G+ R PQ
Sbjct: 69 RKPYRQKGTGRARQGSTRAPQ 89
>gi|300814627|ref|ZP_07094878.1| 50S ribosomal protein L4 [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300511246|gb|EFK38495.1| 50S ribosomal protein L4 [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 207
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 47/61 (77%)
Query: 119 DVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGP 178
++F+ + + +++ VV+ LA R+QGTHS KT SEV G G+KPWRQKGTGRAR G++R P
Sbjct: 22 NIFNCDVNEHVVYLVVKNILANRRQGTHSAKTRSEVRGGGRKPWRQKGTGRARQGSIRSP 81
Query: 179 Q 179
Q
Sbjct: 82 Q 82
>gi|291457203|ref|ZP_06596593.1| ribosomal protein L4/L1 family protein [Bifidobacterium breve DSM
20213 = JCM 1192]
gi|384197729|ref|YP_005583473.1| 50S ribosomal protein L4 [Bifidobacterium breve ACS-071-V-Sch8b]
gi|417941877|ref|ZP_12585158.1| 50S ribosomal protein L4 [Bifidobacterium breve CECT 7263]
gi|291381038|gb|EFE88556.1| ribosomal protein L4/L1 family protein [Bifidobacterium breve DSM
20213 = JCM 1192]
gi|333110712|gb|AEF27728.1| 50S ribosomal protein L4 [Bifidobacterium breve ACS-071-V-Sch8b]
gi|339479841|gb|ABE96309.1| 50S ribosomal protein L4 [Bifidobacterium breve UCC2003]
gi|376167865|gb|EHS86684.1| 50S ribosomal protein L4 [Bifidobacterium breve CECT 7263]
Length = 218
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 122 DVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQGW 181
DV +IH+VV QLA +QGTH+TKT VSG GKKPW+QKGTGRAR G++R PQ W
Sbjct: 32 DVKAHIPLIHQVVTAQLAAARQGTHATKTRGMVSGGGKKPWKQKGTGRARQGSIRAPQ-W 90
Query: 182 YY 183
Y+
Sbjct: 91 YH 92
>gi|317131370|ref|YP_004090684.1| 50S ribosomal protein L4 [Ethanoligenens harbinense YUAN-3]
gi|315469349|gb|ADU25953.1| ribosomal protein L4/L1e [Ethanoligenens harbinense YUAN-3]
Length = 207
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V N E G + LA VF + K +H VV LA ++QGT ST T SEVSG G+KPW
Sbjct: 6 VFNIAGEQVGEIELADSVFGIEPNKTALHTVVVNYLANQRQGTQSTLTRSEVSGGGRKPW 65
Query: 163 RQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
RQKGTG AR G+ R PQ W + + KP
Sbjct: 66 RQKGTGHARQGSTRAPQ-WKHGGIALGPKP 94
>gi|23336502|ref|ZP_00121716.1| COG0088: Ribosomal protein L4 [Bifidobacterium longum DJO10A]
gi|23466131|ref|NP_696734.1| 50S ribosomal protein L4 [Bifidobacterium longum NCC2705]
gi|189440570|ref|YP_001955651.1| 50S ribosomal protein L4 [Bifidobacterium longum DJO10A]
gi|213693087|ref|YP_002323673.1| 50S ribosomal protein L4 [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|227546477|ref|ZP_03976526.1| ribosomal protein L4 [Bifidobacterium longum subsp. longum ATCC
55813]
gi|239621011|ref|ZP_04664042.1| 50S ribosomal protein L4 [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|296454869|ref|YP_003662013.1| 50S ribosomal protein L4/L1e [Bifidobacterium longum subsp. longum
JDM301]
gi|312133875|ref|YP_004001214.1| rpld [Bifidobacterium longum subsp. longum BBMN68]
gi|317483449|ref|ZP_07942439.1| ribosomal protein L4/L1 family protein [Bifidobacterium sp.
12_1_47BFAA]
gi|322689928|ref|YP_004209662.1| 50S ribosomal protein L4 [Bifidobacterium longum subsp. infantis
157F]
gi|322691869|ref|YP_004221439.1| 50S ribosomal protein L4 [Bifidobacterium longum subsp. longum JCM
1217]
gi|384200313|ref|YP_005586056.1| 50S ribosomal protein L4 [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|419846978|ref|ZP_14370181.1| 50S ribosomal protein L4 [Bifidobacterium longum subsp. longum
1-6B]
gi|419850272|ref|ZP_14373275.1| 50S ribosomal protein L4 [Bifidobacterium longum subsp. longum 35B]
gi|419853492|ref|ZP_14376310.1| 50S ribosomal protein L4 [Bifidobacterium longum subsp. longum
2-2B]
gi|419854613|ref|ZP_14377399.1| 50S ribosomal protein L4 [Bifidobacterium longum subsp. longum 44B]
gi|46576825|sp|Q8G416.1|RL4_BIFLO RecName: Full=50S ribosomal protein L4
gi|226730621|sp|B3DQ14.1|RL4_BIFLD RecName: Full=50S ribosomal protein L4
gi|254803717|sp|B7GND9.1|RL4_BIFLI RecName: Full=50S ribosomal protein L4
gi|23326867|gb|AAN25370.1| 50S ribosomal protein L4 [Bifidobacterium longum NCC2705]
gi|189429005|gb|ACD99153.1| Ribosomal protein L4 [Bifidobacterium longum DJO10A]
gi|213524548|gb|ACJ53295.1| ribosomal protein L4/L1e [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|227213026|gb|EEI80905.1| ribosomal protein L4 [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|239516112|gb|EEQ55979.1| 50S ribosomal protein L4 [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|291516468|emb|CBK70084.1| LSU ribosomal protein L4P [Bifidobacterium longum subsp. longum F8]
gi|296184301|gb|ADH01183.1| ribosomal protein L4/L1e [Bifidobacterium longum subsp. longum
JDM301]
gi|311773168|gb|ADQ02656.1| RplD [Bifidobacterium longum subsp. longum BBMN68]
gi|316915135|gb|EFV36567.1| ribosomal protein L4/L1 family protein [Bifidobacterium sp.
12_1_47BFAA]
gi|320456725|dbj|BAJ67347.1| 50S ribosomal protein L4 [Bifidobacterium longum subsp. longum JCM
1217]
gi|320459265|dbj|BAJ69886.1| 50S ribosomal protein L4 [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|320461264|dbj|BAJ71884.1| 50S ribosomal protein L4 [Bifidobacterium longum subsp. infantis
157F]
gi|386407849|gb|EIJ22802.1| 50S ribosomal protein L4 [Bifidobacterium longum subsp. longum
2-2B]
gi|386409769|gb|EIJ24603.1| 50S ribosomal protein L4 [Bifidobacterium longum subsp. longum 35B]
gi|386412522|gb|EIJ27189.1| 50S ribosomal protein L4 [Bifidobacterium longum subsp. longum
1-6B]
gi|386417618|gb|EIJ32094.1| 50S ribosomal protein L4 [Bifidobacterium longum subsp. longum 44B]
Length = 218
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 122 DVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQGW 181
DV +IH+VV QLA +QGTH+TKT VSG GKKPW+QKGTGRAR G++R PQ W
Sbjct: 32 DVQAHIPLIHQVVTAQLAAARQGTHATKTRGMVSGGGKKPWKQKGTGRARQGSIRAPQ-W 90
Query: 182 YY 183
Y+
Sbjct: 91 YH 92
>gi|384200763|ref|YP_005586510.1| 50S ribosomal protein L4 [Bifidobacterium longum subsp. longum KACC
91563]
gi|338753770|gb|AEI96759.1| 50S ribosomal protein L4 [Bifidobacterium longum subsp. longum KACC
91563]
Length = 218
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 122 DVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQGW 181
DV +IH+VV QLA +QGTH+TKT VSG GKKPW+QKGTGRAR G++R PQ W
Sbjct: 32 DVQAHIPLIHQVVTAQLAAARQGTHATKTRGMVSGGGKKPWKQKGTGRARQGSIRAPQ-W 90
Query: 182 YY 183
Y+
Sbjct: 91 YH 92
>gi|384106917|ref|ZP_10007821.1| 50S ribosomal protein L4 [Rhodococcus imtechensis RKJ300]
gi|383833368|gb|EID72831.1| 50S ribosomal protein L4 [Rhodococcus imtechensis RKJ300]
Length = 229
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 48/68 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTH+TKT EV G GKKP+RQKGTGRAR
Sbjct: 24 GTVDLPPEIFDAPANIALLHQVVVAQLAAARQGTHATKTRGEVRGGGKKPYRQKGTGRAR 83
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 84 QGSTRAPQ 91
>gi|374988946|ref|YP_004964441.1| 50S ribosomal protein L4 [Streptomyces bingchenggensis BCW-1]
gi|297159598|gb|ADI09310.1| 50S ribosomal protein L4 [Streptomyces bingchenggensis BCW-1]
Length = 217
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + + G + L ++FD + +IH+VV QLA +QGTH TKT EV G GKK
Sbjct: 4 IDILSPAGDKAGTVELPAEIFDAQVSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G+ R PQ
Sbjct: 64 PYRQKGTGRARQGSTRAPQ 82
>gi|357054995|ref|ZP_09116073.1| 50S ribosomal protein L4 [Clostridium clostridioforme 2_1_49FAA]
gi|355383695|gb|EHG30772.1| 50S ribosomal protein L4 [Clostridium clostridioforme 2_1_49FAA]
Length = 206
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNMEGKEVGTLELNDAVFGVEVNEHLVHLAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|225571553|ref|ZP_03780549.1| hypothetical protein CLOHYLEM_07651 [Clostridium hylemonae DSM
15053]
gi|225159630|gb|EEG72249.1| hypothetical protein CLOHYLEM_07651 [Clostridium hylemonae DSM
15053]
Length = 206
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVGTIDLNDAVFGVEVNEHLVHMAVVSQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRAPQ 82
>gi|379737641|ref|YP_005331147.1| 50S ribosomal protein L4 [Blastococcus saxobsidens DD2]
gi|378785448|emb|CCG05121.1| 50S ribosomal protein L4 [Blastococcus saxobsidens DD2]
Length = 258
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 53/82 (64%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
D + V E G + L G++FD ++H+VV QLA +QGTH+TKT ++V G
Sbjct: 10 DRQVDVRTPAGETSGSVTLPGELFDANANVSLMHQVVVAQLAAARQGTHATKTRAQVRGG 69
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G KP+RQKGTGRAR G++R PQ
Sbjct: 70 GVKPYRQKGTGRARQGSIRAPQ 91
>gi|330795906|ref|XP_003286011.1| hypothetical protein DICPUDRAFT_149944 [Dictyostelium purpureum]
gi|325084009|gb|EGC37447.1| hypothetical protein DICPUDRAFT_149944 [Dictyostelium purpureum]
Length = 258
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 95 LHQDLVIPVTNFFNEDK-GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISE 153
L +++ P+ +F ++ G + L+ D+F P+R D++HR+VR+Q AK QQGTH +
Sbjct: 42 LKEEIEFPIIDFDSKSNVGTIQLSKDIFSRPLRIDLLHRMVRYQRAKSQQGTHQALNMER 101
Query: 154 VSGTGKKPWRQKGTGRARHGTLRGPQ 179
+ + KKP++QKGTGRAR GT Q
Sbjct: 102 KTSSNKKPFKQKGTGRARQGTNHAVQ 127
>gi|453050466|gb|EME98004.1| 50S ribosomal protein L4 [Streptomyces mobaraensis NBRC 13819 = DSM
40847]
Length = 214
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + + G + L ++FD + +IH+VV QLA +QGTH TKT EV G GKK
Sbjct: 4 IDILSPAGDKAGTVELPAEIFDAKVSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G+ R PQ
Sbjct: 64 PYRQKGTGRARQGSTRAPQ 82
>gi|227494546|ref|ZP_03924862.1| ribosomal protein L4 [Actinomyces coleocanis DSM 15436]
gi|226832280|gb|EEH64663.1| ribosomal protein L4 [Actinomyces coleocanis DSM 15436]
Length = 212
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T + G + L +FD +IH+VV QLA +QGTH+TKT +V+G GKK
Sbjct: 5 VEITGVNGKSAGTIELPAAIFDAETNVPLIHQVVVAQLAAARQGTHATKTRGQVAGGGKK 64
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G++R P
Sbjct: 65 PYRQKGTGRARQGSIRAPH 83
>gi|318058127|ref|ZP_07976850.1| 50S ribosomal protein L4 [Streptomyces sp. SA3_actG]
gi|318076020|ref|ZP_07983352.1| 50S ribosomal protein L4 [Streptomyces sp. SA3_actF]
Length = 216
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 47/68 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD + +IH+VV QLA +QGTH TKT EV G GKKP+RQKGTGRAR
Sbjct: 15 GTVELPAEIFDAKVSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKKPYRQKGTGRAR 74
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 75 QGSTRAPQ 82
>gi|110180290|gb|ABG54388.1| 23S ribosomal protein L4 [Brucella pinnipedialis]
Length = 206
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L ++F + R DI+ RVVRWQLA+RQQG+H + +VS TG K
Sbjct: 3 LTITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTGSK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
++QKGTGRA H + R PQ
Sbjct: 63 MYKQKGTGRASHHSARAPQ 81
>gi|384510224|ref|YP_005689802.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis PAT10]
gi|341824163|gb|AEK91684.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis PAT10]
Length = 188
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 55/82 (67%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V + G + L ++FD ++H+VV QLA ++QGTHSTKT +EVSG
Sbjct: 3 NLKLDVLTAEGKTDGQVELPAEIFDREASVALMHQVVNAQLAAKRQGTHSTKTRAEVSGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KP+RQKGTGRAR G++R P
Sbjct: 63 GRKPFRQKGTGRARQGSIRAPH 84
>gi|339445914|ref|YP_004711918.1| hypothetical protein EGYY_24480 [Eggerthella sp. YY7918]
gi|338905666|dbj|BAK45517.1| hypothetical protein EGYY_24480 [Eggerthella sp. YY7918]
Length = 207
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + + G + LA VF + ++H VVR Q A +QGTH TKT +VSG GKK
Sbjct: 4 IEIKDASGKKAGSVDLAPSVFGIEPNVPVMHTVVRSQRAAWRQGTHDTKTRGQVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR GT+R PQ
Sbjct: 64 PWRQKGTGRARQGTIRAPQ 82
>gi|295838405|ref|ZP_06825338.1| ribosomal protein L4/L1 family protein [Streptomyces sp. SPB74]
gi|302519660|ref|ZP_07272002.1| ribosomal protein L4/L1 [Streptomyces sp. SPB78]
gi|333026514|ref|ZP_08454578.1| putative 50S ribosomal protein L4 [Streptomyces sp. Tu6071]
gi|197695798|gb|EDY42731.1| ribosomal protein L4/L1 family protein [Streptomyces sp. SPB74]
gi|302428555|gb|EFL00371.1| ribosomal protein L4/L1 [Streptomyces sp. SPB78]
gi|332746366|gb|EGJ76807.1| putative 50S ribosomal protein L4 [Streptomyces sp. Tu6071]
Length = 216
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 47/68 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD + +IH+VV QLA +QGTH TKT EV G GKKP+RQKGTGRAR
Sbjct: 15 GTVELPAEIFDAKVSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKKPYRQKGTGRAR 74
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 75 QGSTRAPQ 82
>gi|256369656|ref|YP_003107166.1| 50S ribosomal protein L4 [Brucella microti CCM 4915]
gi|255999818|gb|ACU48217.1| 50S ribosomal protein L4 [Brucella microti CCM 4915]
Length = 206
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D + L ++F + R DI+ RVVRWQLA+RQQG+H + +VS TG K
Sbjct: 3 LTITTLEGKDADKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTGSK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
++QKGTGRARH + R PQ
Sbjct: 63 MYKQKGTGRARHHSARAPQ 81
>gi|159039833|ref|YP_001539086.1| 50S ribosomal protein L4 [Salinispora arenicola CNS-205]
gi|157918668|gb|ABW00096.1| ribosomal protein L4/L1e [Salinispora arenicola CNS-205]
Length = 216
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 48/68 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L D+FD ++H+VV QLA +QGTH TKT EV+G GKKP++QKGTGRAR
Sbjct: 15 GSVELPADIFDAQANIALMHQVVVAQLAAARQGTHKTKTRGEVAGGGKKPYKQKGTGRAR 74
Query: 172 HGTLRGPQ 179
G++R PQ
Sbjct: 75 QGSIRAPQ 82
>gi|110180274|gb|ABG54380.1| 23S ribosomal protein L4 [Brucella ceti]
gi|110180278|gb|ABG54382.1| 23S ribosomal protein L4 [Brucella ceti]
Length = 206
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L ++F + R DI+ RVVRWQLA+RQQG+H + +VS TG K
Sbjct: 3 LTITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTGSK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
++QKGT RARH + R PQ
Sbjct: 63 MYKQKGTDRARHHSARAPQ 81
>gi|319899098|ref|YP_004159191.1| 50S ribosomal protein L4 [Bartonella clarridgeiae 73]
gi|319403062|emb|CBI76617.1| 50S ribosomal protein L4 [Bartonella clarridgeiae 73]
Length = 206
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 5/103 (4%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DL+I + ++ G + ++ VF + R+DI+ RVVRWQL +RQ+GTH ++ S+VS T
Sbjct: 2 DLMIKTLD--GKEAGKVKVSESVFGLIPREDILQRVVRWQLTRRQKGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYKVEQEG 200
G K ++QKGTGRARH + R PQ + KA P + G
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQ---FRGGGKAHGPVMRSHAHG 99
>gi|295093644|emb|CBK82735.1| LSU ribosomal protein L4P [Coprococcus sp. ART55/1]
Length = 206
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 43/60 (71%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
VF V I + I+H+ V QLA +QGT S KT SEVSG G+KPWRQKGTG AR G+ R PQ
Sbjct: 23 VFGVEINEHIMHKAVVGQLANNRQGTQSAKTRSEVSGGGRKPWRQKGTGHARQGSTRSPQ 82
>gi|291460719|ref|ZP_06600109.1| ribosomal protein L4/L1 family protein [Oribacterium sp. oral taxon
078 str. F0262]
gi|291416678|gb|EFE90397.1| ribosomal protein L4/L1 family protein [Oribacterium sp. oral taxon
078 str. F0262]
Length = 206
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 51/80 (63%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
++ V + ++ G M L VF PI + ++H V QLA R+QGT T +EVSG G+
Sbjct: 3 IVSVFDMQGKEVGKMELNDAVFAAPINEHLLHLAVVAQLANRRQGTKKALTRAEVSGGGR 62
Query: 160 KPWRQKGTGRARHGTLRGPQ 179
KPWRQKGTG AR G++R PQ
Sbjct: 63 KPWRQKGTGHARQGSIRAPQ 82
>gi|257790718|ref|YP_003181324.1| 50S ribosomal protein L4 [Eggerthella lenta DSM 2243]
gi|317488571|ref|ZP_07947116.1| ribosomal protein L4/L1 family protein [Eggerthella sp. 1_3_56FAA]
gi|325832045|ref|ZP_08165142.1| 50S ribosomal protein L4 [Eggerthella sp. HGA1]
gi|257474615|gb|ACV54935.1| ribosomal protein L4/L1e [Eggerthella lenta DSM 2243]
gi|316912313|gb|EFV33877.1| ribosomal protein L4/L1 family protein [Eggerthella sp. 1_3_56FAA]
gi|325486366|gb|EGC88818.1| 50S ribosomal protein L4 [Eggerthella sp. HGA1]
Length = 207
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + + G LA VF + ++H+VVR Q A +QGTH TKT +V G GKK
Sbjct: 4 IEIKDASGKKAGTADLAASVFGIEPNVPVMHQVVRAQRASWRQGTHDTKTRGQVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR GT+R PQ
Sbjct: 64 PWRQKGTGRARQGTIRAPQ 82
>gi|226323011|ref|ZP_03798529.1| hypothetical protein COPCOM_00783 [Coprococcus comes ATCC 27758]
gi|225208578|gb|EEG90932.1| 50S ribosomal protein L4 [Coprococcus comes ATCC 27758]
Length = 206
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVGTIDLNDAVFGVEVNEHLVHMAVVSQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRAPQ 82
>gi|291298711|ref|YP_003509989.1| 50S ribosomal protein L4 [Stackebrandtia nassauensis DSM 44728]
gi|290567931|gb|ADD40896.1| ribosomal protein L4/L1e [Stackebrandtia nassauensis DSM 44728]
Length = 217
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 54/81 (66%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + VT+ + G + L ++F+ + ++H+VV QLA ++QGTH+TKT VSG G
Sbjct: 3 LEVNVTDATGKKTGTVTLPAELFEREVNIHLMHQVVTAQLAAKRQGTHATKTRGAVSGGG 62
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KP+RQKGTGRAR G+ R PQ
Sbjct: 63 AKPYRQKGTGRARQGSTRAPQ 83
>gi|157964805|ref|YP_001499629.1| 50S ribosomal protein L4 [Rickettsia massiliae MTU5]
gi|157844581|gb|ABV85082.1| 50S ribosomal protein L4 [Rickettsia massiliae MTU5]
Length = 209
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
V + N++ G + L ++F V IR DII +V+ WQ AK G H TKT+SEV GT KKP
Sbjct: 7 VLSLANKEVGEISLNENIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVLGTTKKP 66
Query: 162 WRQKGTGRARHGTLRGPQ----GWYYN--ARSKAQKPCYKVEQEGAA-AWVEDCS 209
++QKGTG AR G+LR Q G + RS A K KV + G A E C+
Sbjct: 67 FKQKGTGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKCA 121
>gi|110180282|gb|ABG54384.1| 23S ribosomal protein L4 [Brucella ceti]
gi|110180286|gb|ABG54386.1| 23S ribosomal protein L4 [Brucella ceti]
Length = 206
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L ++F + R DI+ RVVRWQLA+RQQG+H + +VS TG K
Sbjct: 3 LTITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTGSK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
++QKGT RARH + R PQ
Sbjct: 63 MYKQKGTDRARHHSARAPQ 81
>gi|25027079|ref|NP_737133.1| 50S ribosomal protein L4 [Corynebacterium efficiens YS-314]
gi|259506792|ref|ZP_05749692.1| 50S ribosomal protein L4 [Corynebacterium efficiens YS-314]
gi|46577270|sp|Q8FS79.1|RL4_COREF RecName: Full=50S ribosomal protein L4
gi|23492359|dbj|BAC17333.1| putative 50S ribosomal protein L4 [Corynebacterium efficiens
YS-314]
gi|259165663|gb|EEW50217.1| 50S ribosomal protein L4 [Corynebacterium efficiens YS-314]
Length = 218
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V G + L ++FD + ++H+VV QLA +QGTHSTKT +EV G
Sbjct: 3 NLTLDVQTAEGTTNGSVDLPAEIFDREVSVALLHQVVNAQLAAARQGTHSTKTRAEVRGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KP+RQKGTGRAR G++R P
Sbjct: 63 GRKPFRQKGTGRARQGSIRAPH 84
>gi|357401169|ref|YP_004913094.1| 50S ribosomal protein L4 [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|386357232|ref|YP_006055478.1| 50S ribosomal protein L4 [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|337767578|emb|CCB76289.1| ribosomal protein L4 [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365807740|gb|AEW95956.1| 50S ribosomal protein L4 [Streptomyces cattleya NRRL 8057 = DSM
46488]
Length = 216
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + + G + L ++FD + +IH+VV QLA +QGTH TKT EV G GKK
Sbjct: 4 IDILSPAGDKAGTVELPAEIFDAKVSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G+ R PQ
Sbjct: 64 PYRQKGTGRARQGSTRAPQ 82
>gi|225376410|ref|ZP_03753631.1| hypothetical protein ROSEINA2194_02052 [Roseburia inulinivorans DSM
16841]
gi|225211786|gb|EEG94140.1| hypothetical protein ROSEINA2194_02052 [Roseburia inulinivorans DSM
16841]
Length = 206
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L +F V + + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VAVYNMEGKEVGSLELNDAIFGVEVNEHLVHMAVLQQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYY 183
PWRQKGTG AR G+ R PQ W +
Sbjct: 64 PWRQKGTGHARQGSTRAPQ-WTH 85
>gi|41410260|ref|NP_963096.1| 50S ribosomal protein L4 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|417747841|ref|ZP_12396299.1| 50S ribosomal protein L4, bacterial/organelle [Mycobacterium avium
subsp. paratuberculosis S397]
gi|440779638|ref|ZP_20958350.1| 50S ribosomal protein L4 [Mycobacterium avium subsp.
paratuberculosis S5]
gi|46577156|sp|P61066.1|RL4_MYCPA RecName: Full=50S ribosomal protein L4
gi|41399094|gb|AAS06712.1| RplD [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336460667|gb|EGO39558.1| 50S ribosomal protein L4, bacterial/organelle [Mycobacterium avium
subsp. paratuberculosis S397]
gi|436719835|gb|ELP44175.1| 50S ribosomal protein L4 [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 217
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 49/69 (71%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
+G + L ++FD P ++H+VV Q A +QGTHSTKT +VSG G+KP+RQKGTGRA
Sbjct: 15 EGSIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRGDVSGGGRKPYRQKGTGRA 74
Query: 171 RHGTLRGPQ 179
R G+ R PQ
Sbjct: 75 RQGSTRAPQ 83
>gi|115525584|ref|YP_782495.1| 50S ribosomal protein L4 [Rhodopseudomonas palustris BisA53]
gi|122295409|sp|Q07KL9.1|RL4_RHOP5 RecName: Full=50S ribosomal protein L4
gi|115519531|gb|ABJ07515.1| LSU ribosomal protein L4P [Rhodopseudomonas palustris BisA53]
Length = 206
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ VT +D G + L+ ++F + R DII R V WQLAKRQ GTH K +E+ TGKK
Sbjct: 3 LKVTTLEGKDAGSVQLSDEIFGLDPRSDIIQRCVIWQLAKRQAGTHKAKGRAEIWRTGKK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
++QKGTG ARHG+ R PQ
Sbjct: 63 MYKQKGTGGARHGSQRVPQ 81
>gi|289523368|ref|ZP_06440222.1| ribosomal protein L4/L1 family protein [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503060|gb|EFD24224.1| ribosomal protein L4/L1 family protein [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 208
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 61/104 (58%), Gaps = 6/104 (5%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + G + LA DVF I +H+VV LA ++QGTHSTKT EV G G+K
Sbjct: 4 VDVIGIDGQKVGEVALADDVFAARIHVPAMHQVVVAYLAAQRQGTHSTKTRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGP---QGWYYNA---RSKAQKPCYKVEQ 198
PWRQK TGRARHG++R P +G + RS QK KV+Q
Sbjct: 64 PWRQKHTGRARHGSIRSPLWIKGGVVHGPKPRSYDQKVNKKVKQ 107
>gi|345008571|ref|YP_004810925.1| 50S ribosomal protein L4 [Streptomyces violaceusniger Tu 4113]
gi|344034920|gb|AEM80645.1| ribosomal protein L4/L1e [Streptomyces violaceusniger Tu 4113]
Length = 217
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + + G + L ++FD + +IH+VV QLA +QGTH TKT EV G GKK
Sbjct: 4 IDILSPAGDKAGTVELPAEIFDTQVSIPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G+ R PQ
Sbjct: 64 PYRQKGTGRARQGSTRAPQ 82
>gi|298291439|ref|YP_003693378.1| 50S ribosomal protein L4 [Starkeya novella DSM 506]
gi|296927950|gb|ADH88759.1| ribosomal protein L4/L1e [Starkeya novella DSM 506]
Length = 206
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V D G + L+ ++F + R+DI+HR+V WQLA+RQ GTH T + SEV+ T +K
Sbjct: 3 LAVKKLDGTDAGSVTLSDEIFGLEPRQDILHRMVVWQLARRQAGTHQTLSRSEVNRTKRK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
++QKGTG ARHG PQ
Sbjct: 63 MYKQKGTGGARHGAASAPQ 81
>gi|254502843|ref|ZP_05114994.1| ribosomal protein L4/L1 family [Labrenzia alexandrii DFL-11]
gi|222438914|gb|EEE45593.1| ribosomal protein L4/L1 family [Labrenzia alexandrii DFL-11]
Length = 206
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 49/68 (72%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + ++ ++F + R D+IHRVVRWQLAKRQ GTH T SEV+G+ KK RQKG+G AR
Sbjct: 14 GSITVSDEIFGLDPRTDLIHRVVRWQLAKRQAGTHKTLGRSEVTGSTKKFVRQKGSGGAR 73
Query: 172 HGTLRGPQ 179
HG + PQ
Sbjct: 74 HGNKKAPQ 81
>gi|375093423|ref|ZP_09739688.1| 50S ribosomal protein L4, bacterial/organelle [Saccharomonospora
marina XMU15]
gi|374654156|gb|EHR48989.1| 50S ribosomal protein L4, bacterial/organelle [Saccharomonospora
marina XMU15]
Length = 223
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 49/69 (71%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
+G + L ++FDV ++H+VV QLA +QGTH TKT EV G G+KP+RQKGTGRA
Sbjct: 15 EGTVELPAEIFDVQANIPLMHQVVVAQLAAARQGTHDTKTRGEVRGGGRKPYRQKGTGRA 74
Query: 171 RHGTLRGPQ 179
R G++R PQ
Sbjct: 75 RQGSVRAPQ 83
>gi|150015044|ref|YP_001307298.1| 50S ribosomal protein L4 [Clostridium beijerinckii NCIMB 8052]
gi|189029495|sp|A6LPR2.1|RL4_CLOB8 RecName: Full=50S ribosomal protein L4
gi|149901509|gb|ABR32342.1| ribosomal protein L4/L1e [Clostridium beijerinckii NCIMB 8052]
Length = 206
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNEDKGF---MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ M L +VF I + +H+VV LA ++QGT STKT SEV G
Sbjct: 1 MPTVGVFNKEGNKVADMELNENVFAAEINEYALHQVVVALLANKRQGTQSTKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G KPWRQKGTGRAR G++R PQ
Sbjct: 61 GIKPWRQKGTGRARQGSIRSPQ 82
>gi|56961933|ref|YP_173655.1| 50S ribosomal protein L4 [Bacillus clausii KSM-K16]
gi|81601105|sp|Q5WLR1.1|RL4_BACSK RecName: Full=50S ribosomal protein L4
gi|56908167|dbj|BAD62694.1| 50S ribosomal protein L4 [Bacillus clausii KSM-K16]
Length = 207
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + FN+ G + LA +VF V + ++H V Q A +QGTH TK SEV G
Sbjct: 1 MPKVSLFNQTGSQVGEIELADNVFGVEPNESVLHDAVVMQQASLRQGTHKTKGRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQ 82
>gi|257054471|ref|YP_003132303.1| 50S ribosomal protein L4P [Saccharomonospora viridis DSM 43017]
gi|256584343|gb|ACU95476.1| LSU ribosomal protein L4P [Saccharomonospora viridis DSM 43017]
Length = 228
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 50/71 (70%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
E +G + L ++FDV ++H+VV Q+A +QGTH TKT EV G G+KP+RQKGTG
Sbjct: 13 EAQGTVELPSEIFDVQANIPLMHQVVVAQMAAARQGTHDTKTRGEVRGGGRKPYRQKGTG 72
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 73 RARQGSIRAPQ 83
>gi|451947650|ref|YP_007468245.1| 50S ribosomal protein L4, bacterial/organelle [Desulfocapsa
sulfexigens DSM 10523]
gi|451906998|gb|AGF78592.1| 50S ribosomal protein L4, bacterial/organelle [Desulfocapsa
sulfexigens DSM 10523]
Length = 207
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N NE G + L DVFD+ +++ ++H VVR Q A ++ G STKT EV G G K
Sbjct: 4 VDIVNTSNEKVGEIELNADVFDLTVKEHLLHDVVRMQRAAKRAGNASTKTRREVRGGGAK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PW+QKGTGRAR GT P
Sbjct: 64 PWKQKGTGRARAGTRNSP 81
>gi|404492292|ref|YP_006716398.1| 50S ribosomal protein L4 [Pelobacter carbinolicus DSM 2380]
gi|109893615|sp|Q3A6P6.1|RL4_PELCD RecName: Full=50S ribosomal protein L4
gi|77544399|gb|ABA87961.1| ribosomal protein L4 [Pelobacter carbinolicus DSM 2380]
Length = 206
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L+ +VF+ +++ +IH +VR+QLA R+QGT + K S V+G GKKP+RQKGTG AR GT+
Sbjct: 19 LSDEVFNAEVKEYLIHDMVRYQLAARRQGTSAAKNRSAVAGGGKKPYRQKGTGNARQGTI 78
Query: 176 RGPQ 179
R P
Sbjct: 79 RAPH 82
>gi|118466008|ref|YP_883605.1| 50S ribosomal protein L4 [Mycobacterium avium 104]
gi|254776906|ref|ZP_05218422.1| 50S ribosomal protein L4 [Mycobacterium avium subsp. avium ATCC
25291]
gi|166234686|sp|A0QL17.1|RL4_MYCA1 RecName: Full=50S ribosomal protein L4
gi|118167295|gb|ABK68192.1| ribosomal protein L4/L1 family protein [Mycobacterium avium 104]
Length = 217
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 49/69 (71%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
+G + L ++FD P ++H+VV Q A +QGTHSTKT +VSG G+KP+RQKGTGRA
Sbjct: 15 EGSIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRGDVSGGGRKPYRQKGTGRA 74
Query: 171 RHGTLRGPQ 179
R G+ R PQ
Sbjct: 75 RQGSTRAPQ 83
>gi|239787564|emb|CAX84032.1| 50S ribosomal protein L4 [uncultured bacterium]
Length = 217
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 50/78 (64%)
Query: 102 PVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
PV + N+ + L+ F +R D++ RVV +QLAKR+ GT STK EV G G KP
Sbjct: 5 PVVDAANQTSHTVNLSSHAFGCEVRGDLLTRVVHYQLAKRRLGTASTKRRGEVRGGGHKP 64
Query: 162 WRQKGTGRARHGTLRGPQ 179
+RQKGTG AR GT+R PQ
Sbjct: 65 YRQKGTGNARQGTIRAPQ 82
>gi|238061120|ref|ZP_04605829.1| 50S ribosomal protein L4 rplD [Micromonospora sp. ATCC 39149]
gi|57547708|gb|AAW52547.1| RplD [Micromonospora sp. ATCC 39149]
gi|237882931|gb|EEP71759.1| 50S ribosomal protein L4 rplD [Micromonospora sp. ATCC 39149]
Length = 216
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L +FDV ++H+VV QLA +QGTH KT EV+G GKK
Sbjct: 4 VDVLNVEGAKSGSVELPAGIFDVQANIALMHQVVVAQLAAARQGTHKAKTRGEVAGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P++QKGTGRAR G++R PQ
Sbjct: 64 PYKQKGTGRARQGSIRAPQ 82
>gi|218135280|ref|ZP_03464084.1| hypothetical protein BACPEC_03185 [[Bacteroides] pectinophilus ATCC
43243]
gi|217990665|gb|EEC56676.1| 50S ribosomal protein L4 [[Bacteroides] pectinophilus ATCC 43243]
Length = 206
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 49/79 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L +F V I + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVGSLELNDAIFGVEINEHLVHMAVVQQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRAPQ 82
>gi|92117099|ref|YP_576828.1| 50S ribosomal protein L4 [Nitrobacter hamburgensis X14]
gi|122418094|sp|Q1QN29.1|RL4_NITHX RecName: Full=50S ribosomal protein L4
gi|91799993|gb|ABE62368.1| LSU ribosomal protein L4P [Nitrobacter hamburgensis X14]
Length = 206
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT G + L+ +F + RKD+I R V WQLAKRQ GTH TK +E+ TG
Sbjct: 1 MELNVTTLEGNAAGSVQLSDGIFGLEPRKDLIQRCVNWQLAKRQAGTHKTKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KK ++QKGTG ARHG+ R PQ
Sbjct: 61 KKMFKQKGTGNARHGSARVPQ 81
>gi|383827527|ref|ZP_09982621.1| 50S ribosomal protein L4 [Mycobacterium xenopi RIVM700367]
gi|383330227|gb|EID08759.1| 50S ribosomal protein L4 [Mycobacterium xenopi RIVM700367]
Length = 218
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 53/79 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V + + +G + L ++FDV ++H+VV Q A +QGTHSTKT EV G G+K
Sbjct: 6 IDVKSPAGKTEGSIELPAELFDVEANIPLMHQVVTAQRAAARQGTHSTKTRGEVRGGGRK 65
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G++R PQ
Sbjct: 66 PYRQKGTGRARQGSVRAPQ 84
>gi|336436040|ref|ZP_08615753.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 1_4_56FAA]
gi|336008080|gb|EGN38099.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 1_4_56FAA]
Length = 206
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVGTIDLNDAVFGVEVNEHLVHMAVVSQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRAPQ 82
>gi|302388713|ref|YP_003824534.1| 50S ribosomal protein L4P [Thermosediminibacter oceani DSM 16646]
gi|302199341|gb|ADL06911.1| LSU ribosomal protein L4P [Thermosediminibacter oceani DSM 16646]
Length = 208
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 54/78 (69%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N + G + L+ VF V ++ +++H+VV LA ++ GT STKT +EV G G+K
Sbjct: 4 VALYNMQGQQVGEVELSDSVFGVEVKPEVMHQVVLNYLANQRVGTASTKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRARHG++R P
Sbjct: 64 PWRQKGTGRARHGSIRSP 81
>gi|400536062|ref|ZP_10799598.1| 50S ribosomal protein L4 [Mycobacterium colombiense CECT 3035]
gi|400331105|gb|EJO88602.1| 50S ribosomal protein L4 [Mycobacterium colombiense CECT 3035]
Length = 226
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 53/81 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + +G + L ++FD P ++H+VV Q A +QGTHSTKT +VSG G
Sbjct: 8 LKIDVKTPGGKVEGSIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRGDVSGGG 67
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
+KP+RQKGTGRAR G+ R PQ
Sbjct: 68 RKPYRQKGTGRARQGSTRAPQ 88
>gi|160881784|ref|YP_001560752.1| 50S ribosomal protein L4 [Clostridium phytofermentans ISDg]
gi|189029497|sp|A9KJJ3.1|RL4_CLOPH RecName: Full=50S ribosomal protein L4
gi|160430450|gb|ABX44013.1| ribosomal protein L4/L1e [Clostridium phytofermentans ISDg]
Length = 206
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L +F V + + ++H V QLA ++QGT S KT +EVSG G+K
Sbjct: 4 VKVYNIEGKEVGSLELNDAIFGVEVNEHLMHMAVVSQLANKRQGTQSAKTRAEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|163815976|ref|ZP_02207346.1| hypothetical protein COPEUT_02156 [Coprococcus eutactus ATCC 27759]
gi|158448786|gb|EDP25781.1| 50S ribosomal protein L4 [Coprococcus eutactus ATCC 27759]
Length = 206
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 43/60 (71%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
VF V I + I+H+ V QLA +QGT S KT SEVSG G+KPWRQKGTG AR G+ R PQ
Sbjct: 23 VFGVEINEHIMHKAVVGQLANSRQGTQSAKTRSEVSGGGRKPWRQKGTGHARQGSTRSPQ 82
>gi|363898729|ref|ZP_09325251.1| 50S ribosomal protein L4 [Oribacterium sp. ACB1]
gi|395209095|ref|ZP_10398260.1| 50S ribosomal protein L4 [Oribacterium sp. ACB8]
gi|361960634|gb|EHL13870.1| 50S ribosomal protein L4 [Oribacterium sp. ACB1]
gi|394705696|gb|EJF13222.1| 50S ribosomal protein L4 [Oribacterium sp. ACB8]
Length = 206
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G M L +F P+ + ++H V QLA ++QGT T SEVSG G+K
Sbjct: 4 VSVFNMQGKEVGKMDLNDAIFAAPVHEHLLHLAVVAQLANKRQGTQKALTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G++R PQ
Sbjct: 64 PWRQKGTGHARQGSIRAPQ 82
>gi|153854971|ref|ZP_01996184.1| hypothetical protein DORLON_02190 [Dorea longicatena DSM 13814]
gi|149752468|gb|EDM62399.1| 50S ribosomal protein L4 [Dorea longicatena DSM 13814]
Length = 206
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L+ VF V + + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVGKIDLSDAVFGVEVNEHLVHMAVVSQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRAPQ 82
>gi|359427460|ref|ZP_09218526.1| 50S ribosomal protein L4 [Gordonia amarae NBRC 15530]
gi|358237278|dbj|GAB08108.1| 50S ribosomal protein L4 [Gordonia amarae NBRC 15530]
Length = 226
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 48/69 (69%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
G + L ++FD P ++H+VV Q A ++QGTH+TKT +VSG G KP+RQKGTGRA
Sbjct: 24 NGTVDLPAELFDAPANISLMHQVVVAQQAAKRQGTHATKTRGQVSGGGAKPYRQKGTGRA 83
Query: 171 RHGTLRGPQ 179
R G+ R PQ
Sbjct: 84 RQGSTRAPQ 92
>gi|395789499|ref|ZP_10469019.1| 50S ribosomal protein L4 [Bartonella taylorii 8TBB]
gi|395430042|gb|EJF96094.1| 50S ribosomal protein L4 [Bartonella taylorii 8TBB]
Length = 206
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + + G + ++ +F + R+DI+ RV+ WQLA+RQQGTH ++ S+VS T
Sbjct: 2 DLVIKTLD--GNEAGKLKVSEAIFGLVPREDILQRVILWQLARRQQGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
G K ++QKGTGRARH + R PQ + KA P +
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQ---FRGGGKAHGPVTR 94
>gi|390934122|ref|YP_006391627.1| 50S ribosomal protein L4 [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569623|gb|AFK86028.1| ribosomal protein L4/L1e [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 206
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G + L+ +VF V + ++H V LA ++QGTHSTK EV G G K
Sbjct: 4 VAVYNINAEQIGEIELSDNVFGVEVNVPVMHEAVLNYLANQRQGTHSTKRRGEVRGGGIK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G++R PQ
Sbjct: 64 PWRQKGTGRARQGSIRAPQ 82
>gi|225574701|ref|ZP_03783311.1| hypothetical protein RUMHYD_02778 [Blautia hydrogenotrophica DSM
10507]
gi|225038091|gb|EEG48337.1| 50S ribosomal protein L4 [Blautia hydrogenotrophica DSM 10507]
Length = 206
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 49/79 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + L VF V I + ++H V QLA ++QGT KT SEV G G+K
Sbjct: 4 VSVLNMEGNEVGTIELNDAVFGVEINEHLVHLAVVRQLANKRQGTQKAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G++R PQ
Sbjct: 64 PWRQKGTGHARQGSIRAPQ 82
>gi|88657712|ref|YP_507228.1| 50S ribosomal protein L4 [Ehrlichia chaffeensis str. Arkansas]
gi|109893594|sp|Q2GH55.1|RL4_EHRCR RecName: Full=50S ribosomal protein L4
gi|88599169|gb|ABD44638.1| ribosomal protein L4 [Ehrlichia chaffeensis str. Arkansas]
Length = 205
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N ++ G + L +F V R DI+ VV WQL+KR+ GTH KTI ++SGT K
Sbjct: 3 VNIINVNSDRIGTIDLNPLIFSVNYRPDILKMVVDWQLSKRRAGTHKAKTIGDISGTTAK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P RQK TGRAR G+LR PQ
Sbjct: 63 PHRQKHTGRARQGSLRSPQ 81
>gi|220903935|ref|YP_002479247.1| 50S ribosomal protein L4 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254803730|sp|B8IYH3.1|RL4_DESDA RecName: Full=50S ribosomal protein L4
gi|219868234|gb|ACL48569.1| ribosomal protein L4/L1e [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 210
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + ++ G + LA DVF++ +R +I++ V R Q+A ++ GTH+ KT + VSG G K
Sbjct: 4 VKVYDQNKQESGEVTLASDVFEIEVRPEILNLVARAQMAAKRAGTHNVKTRAFVSGGGAK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PW+QKGTGRAR G+ R P
Sbjct: 64 PWKQKGTGRARAGSNRSP 81
>gi|408380611|ref|ZP_11178195.1| 50S ribosomal protein L4 [Agrobacterium albertimagni AOL15]
gi|407745824|gb|EKF57356.1| 50S ribosomal protein L4 [Agrobacterium albertimagni AOL15]
Length = 206
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ ++F + R+D+I R++R+QLAK++ GTH K SEVS TG K +
Sbjct: 5 VKTLEGKDAGKVSLSEEIFGLEPREDLIARMIRYQLAKKRAGTHKIKGRSEVSRTGSKMY 64
Query: 163 RQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
+QKGTGRARH + R PQ + KA P +
Sbjct: 65 KQKGTGRARHHSARAPQ---FRGGGKAHGPVVR 94
>gi|375137896|ref|YP_004998545.1| 50S ribosomal protein L4 [Mycobacterium rhodesiae NBB3]
gi|359818517|gb|AEV71330.1| 50S ribosomal protein L4, bacterial/organelle [Mycobacterium
rhodesiae NBB3]
Length = 220
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 52/81 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + G + L +FDV ++H+VV QLA ++QGTHSTKT +V G G
Sbjct: 6 LKIDVHTPAGKKDGSVELPAALFDVEPNIALMHQVVEAQLAAKRQGTHSTKTRGDVRGGG 65
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KKP+RQKGTGRAR G+ R PQ
Sbjct: 66 KKPYRQKGTGRARQGSTRAPQ 86
>gi|379713549|ref|YP_005301887.1| 50S ribosomal protein L4 [Rickettsia massiliae str. AZT80]
gi|376334195|gb|AFB31427.1| 50S ribosomal protein L4 [Rickettsia massiliae str. AZT80]
Length = 207
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + N++ G + L ++F V IR DII +V+ WQ AK G H TKT+SEV GT KKP
Sbjct: 5 ILSLANKEVGEISLNENIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVLGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQ----GWYYN--ARSKAQKPCYKVEQEGAA-AWVEDCS 209
++QKGTG AR G+LR Q G + RS A K KV + G A E C+
Sbjct: 65 FKQKGTGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKCA 119
>gi|335046489|ref|ZP_08539512.1| 50S ribosomal protein L4 [Oribacterium sp. oral taxon 108 str.
F0425]
gi|333760275|gb|EGL37832.1| 50S ribosomal protein L4 [Oribacterium sp. oral taxon 108 str.
F0425]
Length = 206
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G M L +F P+ + ++H V QLA ++QGT T SEVSG G+K
Sbjct: 4 VSVFNMQGKEVGKMDLNDAIFAAPVHEHLLHLAVVAQLANKRQGTQKALTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G++R PQ
Sbjct: 64 PWRQKGTGHARQGSIRAPQ 82
>gi|433609659|ref|YP_007042028.1| 50S ribosomal protein L4 [Saccharothrix espanaensis DSM 44229]
gi|407887512|emb|CCH35155.1| 50S ribosomal protein L4 [Saccharothrix espanaensis DSM 44229]
Length = 228
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 47/68 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L VFD ++H+VV QLA +QGTHSTKT EVSG GKKP+RQKGTGRAR
Sbjct: 15 GNVELPPSVFDAQANVALLHQVVVAQLAAARQGTHSTKTRGEVSGGGKKPYRQKGTGRAR 74
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 75 QGSTRAPQ 82
>gi|333896189|ref|YP_004470063.1| 50S ribosomal protein L4 [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333111454|gb|AEF16391.1| ribosomal protein L4/L1e [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 206
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G + L+ +VF V + ++H V LA ++QGTHSTK EV G G K
Sbjct: 4 VAVYNINAEQIGEIELSDNVFGVEVNVPVMHEAVLNYLANQRQGTHSTKRRGEVRGGGIK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G++R PQ
Sbjct: 64 PWRQKGTGRARQGSIRAPQ 82
>gi|269796254|ref|YP_003315709.1| 50S ribosomal protein L4P [Sanguibacter keddieii DSM 10542]
gi|269098439|gb|ACZ22875.1| LSU ribosomal protein L4P [Sanguibacter keddieii DSM 10542]
Length = 234
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 52/85 (61%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ + L + V + + G L +VFDV +IH+VV QLA +QGTH TK EV
Sbjct: 1 MSETLTVDVIDAKGKKAGTADLPAEVFDVQTNIPLIHQVVVAQLAAARQGTHDTKNRGEV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
G G+KP++QKGTGRAR G+ R PQ
Sbjct: 61 RGGGRKPYKQKGTGRARQGSTRAPQ 85
>gi|119961638|ref|YP_948656.1| ribosomal protein L4 [Arthrobacter aurescens TC1]
gi|403528132|ref|YP_006663019.1| 50S ribosomal protein L4 [Arthrobacter sp. Rue61a]
gi|119948497|gb|ABM07408.1| ribosomal protein L4 [Arthrobacter aurescens TC1]
gi|403230559|gb|AFR29981.1| 50S ribosomal protein L4 [Arthrobacter sp. Rue61a]
Length = 205
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FDV ++H+VV QLA +QGTH TKT +EVSG G+KP++QKGTGRAR G++
Sbjct: 9 LPAEIFDVQTNVPLLHQVVVAQLAAARQGTHKTKTRAEVSGAGRKPFKQKGTGRARQGSI 68
Query: 176 RGPQ 179
R P
Sbjct: 69 RAPH 72
>gi|134298094|ref|YP_001111590.1| 50S ribosomal protein L4 [Desulfotomaculum reducens MI-1]
gi|172044220|sp|A4J112.1|RL4_DESRM RecName: Full=50S ribosomal protein L4
gi|134050794|gb|ABO48765.1| LSU ribosomal protein L4P [Desulfotomaculum reducens MI-1]
Length = 206
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E G + L +VF + + ++H V QLA ++QGTH TKT +EV G G+K
Sbjct: 4 VALYNINGEQVGEVELKDEVFGIEPHEHVMHEAVNMQLANQRQGTHDTKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRAR G+ R P
Sbjct: 64 PWRQKGTGRARAGSSRSP 81
>gi|443294174|ref|ZP_21033268.1| 50S ribosomal protein L4 [Micromonospora lupini str. Lupac 08]
gi|385882688|emb|CCH21419.1| 50S ribosomal protein L4 [Micromonospora lupini str. Lupac 08]
Length = 216
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 46/64 (71%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L D+FDV ++H+VV QLA +QGTH KT EV+G GKKP++QKGTGRAR G++
Sbjct: 19 LPADIFDVQANVALMHQVVVAQLAAARQGTHKAKTRGEVAGGGKKPYKQKGTGRARQGSI 78
Query: 176 RGPQ 179
R PQ
Sbjct: 79 RAPQ 82
>gi|338739397|ref|YP_004676359.1| 50S ribosomal protein L4 [Hyphomicrobium sp. MC1]
gi|337759960|emb|CCB65791.1| 50S ribosomal protein L4 [Hyphomicrobium sp. MC1]
Length = 206
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
VT+ G + LA D+F + +R D+IHR+VR+Q KR GTH + SEV+ TGKK +
Sbjct: 5 VTSLDAGKSGDIELADDIFGLEVRNDLIHRMVRYQTLKRMAGTHHAQDRSEVAVTGKKMY 64
Query: 163 RQKGTGRARHGTLRGPQ 179
+QKGTG ARHG PQ
Sbjct: 65 KQKGTGGARHGDKSAPQ 81
>gi|320160415|ref|YP_004173639.1| 50S ribosomal protein L4 [Anaerolinea thermophila UNI-1]
gi|319994268|dbj|BAJ63039.1| 50S ribosomal protein L4 [Anaerolinea thermophila UNI-1]
Length = 208
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+++ V N + + L +F+ PI D++H+ Q+A + GTH TKT +EVSG G
Sbjct: 1 MLVDVVNMQGQKVSSVELPESIFEAPIYIDLMHQAYVRQMANARLGTHDTKTRNEVSGGG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
+KPWRQKGTGRAR G+ R P W A+ P
Sbjct: 61 RKPWRQKGTGRARQGSTRSPV-WAKGAKVHTPHP 93
>gi|90424936|ref|YP_533306.1| 50S ribosomal protein L4 [Rhodopseudomonas palustris BisB18]
gi|109893630|sp|Q211E9.1|RL4_RHOPB RecName: Full=50S ribosomal protein L4
gi|90106950|gb|ABD88987.1| LSU ribosomal protein L4P [Rhodopseudomonas palustris BisB18]
Length = 206
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ VT ++ G + L+ ++F + R DII R V WQLAKRQ GTH K +EV TGKK
Sbjct: 3 LKVTTLEGKEAGSVQLSDEIFGLDPRVDIIQRCVNWQLAKRQAGTHKAKGRAEVWRTGKK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
++QKGTG ARHG+ R PQ
Sbjct: 63 MYKQKGTGGARHGSQRVPQ 81
>gi|442806055|ref|YP_007374204.1| 50S ribosomal protein L4 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741905|gb|AGC69594.1| 50S ribosomal protein L4 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 208
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G + L+ D+F V + D +H V LA +QGT S KT SEV G G+K
Sbjct: 4 VDVYNIKGEVVGDIYLSDDIFGVEVNTDAMHTAVVNHLANTRQGTQSAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PWRQKGTGRAR G++R Q W + A KP
Sbjct: 64 PWRQKGTGRARQGSIRAVQ-WKGGGVAFAPKP 94
>gi|359777764|ref|ZP_09281040.1| 50S ribosomal protein L4 [Arthrobacter globiformis NBRC 12137]
gi|359304910|dbj|GAB14869.1| 50S ribosomal protein L4 [Arthrobacter globiformis NBRC 12137]
Length = 206
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FDV ++H+VV QLA +QGTH TKT +EVSG G+KP++QKGTGRAR G++
Sbjct: 9 LPAEIFDVQTNVPLLHQVVVAQLAAARQGTHKTKTRAEVSGAGRKPFKQKGTGRARQGSI 68
Query: 176 RGPQ 179
R P
Sbjct: 69 RAPH 72
>gi|326385098|ref|ZP_08206768.1| 50S ribosomal protein L4 [Gordonia neofelifaecis NRRL B-59395]
gi|326196183|gb|EGD53387.1| 50S ribosomal protein L4 [Gordonia neofelifaecis NRRL B-59395]
Length = 219
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 53/81 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V N + G + L ++FDV ++H+VV Q A +QGTHSTKT +V+G G
Sbjct: 9 LTLDVRNADGTNNGTVDLPAELFDVTANIALMHQVVVAQQAAGRQGTHSTKTRGQVAGGG 68
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KP+RQKGTGRAR G++R PQ
Sbjct: 69 AKPYRQKGTGRARQGSIRAPQ 89
>gi|116671520|ref|YP_832453.1| 50S ribosomal protein L4P [Arthrobacter sp. FB24]
gi|116611629|gb|ABK04353.1| LSU ribosomal protein L4P [Arthrobacter sp. FB24]
Length = 205
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FDV ++H+VV QLA +QGTH TKT +EVSG G+KP++QKGTGRAR G++
Sbjct: 9 LPAEIFDVQTNVPLLHQVVVAQLAAARQGTHKTKTRAEVSGAGRKPFKQKGTGRARQGSI 68
Query: 176 RGPQ 179
R P
Sbjct: 69 RAPH 72
>gi|302543360|ref|ZP_07295702.1| ribosomal protein L4/L1 family protein [Streptomyces hygroscopicus
ATCC 53653]
gi|302460978|gb|EFL24071.1| ribosomal protein L4/L1 family protein [Streptomyces himastatinicus
ATCC 53653]
Length = 217
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + + G + L ++FD + +IH+VV QLA +QGTH TKT EV G GKK
Sbjct: 4 IDILSPAGDKAGTVELPTEIFDAQVSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G+ R PQ
Sbjct: 64 PYRQKGTGRARQGSTRAPQ 82
>gi|312140917|ref|YP_004008253.1| 50S ribosomal protein l4 rpld [Rhodococcus equi 103S]
gi|325675445|ref|ZP_08155129.1| 50S ribosomal protein L4 [Rhodococcus equi ATCC 33707]
gi|311890256|emb|CBH49574.1| 50S ribosomal protein L4 RplD [Rhodococcus equi 103S]
gi|325553416|gb|EGD23094.1| 50S ribosomal protein L4 [Rhodococcus equi ATCC 33707]
Length = 221
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 51/81 (62%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V + G + L ++FD ++H+VV QLA +QGTHSTKT EV G G
Sbjct: 8 LTLDVKAAGGKTNGTVDLPSEIFDATANIALMHQVVVAQLAAARQGTHSTKTRGEVRGGG 67
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KKP+RQKGTGRAR G+ R PQ
Sbjct: 68 KKPYRQKGTGRARQGSTRAPQ 88
>gi|302853159|ref|XP_002958096.1| mitochondrial ribosomal protein L4 [Volvox carteri f. nagariensis]
gi|300256564|gb|EFJ40827.1| mitochondrial ribosomal protein L4 [Volvox carteri f. nagariensis]
Length = 357
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 50/76 (65%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V + + G + L G F+VP+R DI+HRVVR+ AK QQGTH K EVSG G+KP
Sbjct: 88 VYSMDEQPLGLVRLPGVAFNVPVRLDILHRVVRYLRAKWQQGTHKAKRRGEVSGGGRKPR 147
Query: 163 RQKGTGRARHGTLRGP 178
QK TGRAR G++R P
Sbjct: 148 PQKKTGRARQGSIRSP 163
>gi|258651364|ref|YP_003200520.1| 50S ribosomal protein L4 [Nakamurella multipartita DSM 44233]
gi|258554589|gb|ACV77531.1| ribosomal protein L4/L1e [Nakamurella multipartita DSM 44233]
Length = 248
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 46/64 (71%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++F+VP ++H+VV QLA +QGTH KT EVSG GKKP+RQKGTGRAR G+
Sbjct: 19 LPDEIFNVPANVPLMHQVVVAQLAAARQGTHKAKTRGEVSGGGKKPYRQKGTGRARQGST 78
Query: 176 RGPQ 179
R PQ
Sbjct: 79 RAPQ 82
>gi|338811126|ref|ZP_08623362.1| ribosomal protein L4/L1e [Acetonema longum DSM 6540]
gi|337276949|gb|EGO65350.1| ribosomal protein L4/L1e [Acetonema longum DSM 6540]
Length = 208
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G M L +VF + + ++H+ + QLA R+QGT +TKT ++V G GKK
Sbjct: 4 VAVYNVAGQKTGEMELNENVFGIQFNEAVVHQALVMQLASRRQGTAATKTRAQVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PW+QKGTGRAR G++R P
Sbjct: 64 PWKQKGTGRARAGSIRSP 81
>gi|295111421|emb|CBL28171.1| LSU ribosomal protein L4P [Synergistetes bacterium SGP1]
Length = 207
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 49/78 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V +F + G M L+ VF PI +H+VV LA +QGTH+ KT +VSG GKK
Sbjct: 4 IKVVDFSGQSAGEMELSEVVFGAPIHVAAMHQVVVAHLANCRQGTHAVKTRGDVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQK TGRAR G+ R P
Sbjct: 64 PWRQKHTGRARQGSTRSP 81
>gi|376242120|ref|YP_005132972.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae CDCE 8392]
gi|419860092|ref|ZP_14382737.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
gi|372105362|gb|AEX71424.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae CDCE 8392]
gi|387983300|gb|EIK56777.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
Length = 217
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 54/82 (65%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V + G + L ++FD ++H+VV QLA ++QGTHS KT +EVSG
Sbjct: 3 NLKLDVLTAEGKTDGQVELPAEIFDREASVALLHQVVNAQLAAKRQGTHSAKTRAEVSGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KP+RQKGTGRAR G++R P
Sbjct: 63 GRKPFRQKGTGRARQGSIRAPH 84
>gi|220913431|ref|YP_002488740.1| 50S ribosomal protein L4 [Arthrobacter chlorophenolicus A6]
gi|219860309|gb|ACL40651.1| ribosomal protein L4/L1e [Arthrobacter chlorophenolicus A6]
Length = 206
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FDV ++H+VV QLA +QGTH TKT +EVSG G+KP++QKGTGRAR G++
Sbjct: 9 LPAEIFDVQTNVPLLHQVVVAQLAAARQGTHKTKTRAEVSGAGRKPFKQKGTGRARQGSI 68
Query: 176 RGPQ 179
R P
Sbjct: 69 RAPH 72
>gi|39936312|ref|NP_948588.1| 50S ribosomal protein L4 [Rhodopseudomonas palustris CGA009]
gi|192292036|ref|YP_001992641.1| 50S ribosomal protein L4 [Rhodopseudomonas palustris TIE-1]
gi|46577158|sp|P61068.1|RL4_RHOPA RecName: Full=50S ribosomal protein L4; AltName: Full=RRP-L4
gi|226730715|sp|B3QBX9.1|RL4_RHOPT RecName: Full=50S ribosomal protein L4
gi|39650167|emb|CAE28690.1| 50S ribosomal protein L4 [Rhodopseudomonas palustris CGA009]
gi|192285785|gb|ACF02166.1| ribosomal protein L4/L1e [Rhodopseudomonas palustris TIE-1]
Length = 206
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ VT ++ G + L+ ++F + R DII R V WQLAKRQ GTH K +EV TGKK
Sbjct: 3 LKVTTLEGKEAGSVQLSDEIFGLEPRSDIIQRCVIWQLAKRQAGTHKAKGRAEVWRTGKK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
++QKGTG ARHG+ R PQ
Sbjct: 63 MYKQKGTGGARHGSQRVPQ 81
>gi|398784931|ref|ZP_10548052.1| 50S ribosomal protein L4 [Streptomyces auratus AGR0001]
gi|396994821|gb|EJJ05848.1| 50S ribosomal protein L4 [Streptomyces auratus AGR0001]
Length = 216
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + + G + L ++FD + +IH+VV QLA +QGTH TKT EV G GKK
Sbjct: 4 IDILSPAGDKAGTVELPTEIFDAKVSIPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G+ R PQ
Sbjct: 64 PYRQKGTGRARQGSTRAPQ 82
>gi|158424177|ref|YP_001525469.1| 50S ribosomal protein L4 [Azorhizobium caulinodans ORS 571]
gi|158331066|dbj|BAF88551.1| ribosomal protein L4/L1e [Azorhizobium caulinodans ORS 571]
Length = 207
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + G + L+ +F + R DI+HR+V WQLA+RQ GTH TK SE++ T KK
Sbjct: 4 LTVKTLDGAEAGSIQLSDAIFGLEPRADILHRMVTWQLARRQAGTHRTKGRSEINRTSKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
++QKGTG ARHG PQ
Sbjct: 64 LYKQKGTGNARHGAASAPQ 82
>gi|38233086|ref|NP_938853.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae NCTC 13129]
gi|375290142|ref|YP_005124682.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae 241]
gi|375292361|ref|YP_005126900.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae INCA 402]
gi|376244977|ref|YP_005135216.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae HC01]
gi|376247747|ref|YP_005139691.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae HC04]
gi|376250566|ref|YP_005137447.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae HC03]
gi|376253570|ref|YP_005142029.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae PW8]
gi|376256381|ref|YP_005144272.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae VA01]
gi|376283976|ref|YP_005157186.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae 31A]
gi|376286938|ref|YP_005159504.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae BH8]
gi|376289622|ref|YP_005161869.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae C7 (beta)]
gi|376292535|ref|YP_005164209.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae HC02]
gi|46577152|sp|P61062.1|RL4_CORDI RecName: Full=50S ribosomal protein L4
gi|38199345|emb|CAE48978.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae]
gi|371577491|gb|AEX41159.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae 31A]
gi|371579813|gb|AEX43480.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae 241]
gi|371582032|gb|AEX45698.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae INCA 402]
gi|371584272|gb|AEX47937.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae BH8]
gi|372103018|gb|AEX66615.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae C7 (beta)]
gi|372107607|gb|AEX73668.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae HC01]
gi|372109858|gb|AEX75918.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae HC02]
gi|372112070|gb|AEX78129.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae HC03]
gi|372114315|gb|AEX80373.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae HC04]
gi|372116654|gb|AEX69124.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae PW8]
gi|372118898|gb|AEX82632.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae VA01]
Length = 217
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 54/82 (65%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V + G + L ++FD ++H+VV QLA ++QGTHS KT +EVSG
Sbjct: 3 NLKLDVLTAEGKTDGQVELPAEIFDREASVALLHQVVNAQLAAKRQGTHSAKTRAEVSGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KP+RQKGTGRAR G++R P
Sbjct: 63 GRKPFRQKGTGRARQGSIRAPH 84
>gi|154253178|ref|YP_001414002.1| 50S ribosomal protein L4 [Parvibaculum lavamentivorans DS-1]
gi|171769628|sp|A7HWR2.1|RL4_PARL1 RecName: Full=50S ribosomal protein L4
gi|154157128|gb|ABS64345.1| ribosomal protein L4/L1e [Parvibaculum lavamentivorans DS-1]
Length = 206
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I VT + G + L VF + R DI+HR+V WQLAKRQ GTH TK SE++ TGKK
Sbjct: 3 IDVTTLEAKKAGSVDLTDGVFALEPRGDILHRMVAWQLAKRQAGTHKTKGRSEIALTGKK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
+QKG+G ARHG + PQ
Sbjct: 63 FVKQKGSGGARHGDRKAPQ 81
>gi|433456017|ref|ZP_20414079.1| 50S ribosomal protein L4 [Arthrobacter crystallopoietes BAB-32]
gi|432196799|gb|ELK53224.1| 50S ribosomal protein L4 [Arthrobacter crystallopoietes BAB-32]
Length = 205
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FDV ++H+VV QLA +QGTH TKT +EVSG G+KP++QKGTGRAR G++
Sbjct: 9 LPAEIFDVQTNVPLLHQVVVAQLAAARQGTHKTKTRAEVSGAGRKPFKQKGTGRARQGSI 68
Query: 176 RGPQ 179
R P
Sbjct: 69 RAPH 72
>gi|110180276|gb|ABG54381.1| 23S ribosomal protein L4 [Brucella ceti]
gi|110180280|gb|ABG54383.1| 23S ribosomal protein L4 [Brucella ceti]
Length = 206
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L ++F + R DI+ RVVRWQLA+RQQG+H + +VS TG K
Sbjct: 3 LTITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTGSK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
++QKGTGRA H + R PQ
Sbjct: 63 MYKQKGTGRACHHSARAPQ 81
>gi|429765123|ref|ZP_19297425.1| 50S ribosomal protein L4 [Clostridium celatum DSM 1785]
gi|429186866|gb|EKY27795.1| 50S ribosomal protein L4 [Clostridium celatum DSM 1785]
Length = 206
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 101 IPVTNFFNEDKGFMV---LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ + L VF V + D +H+VV LA ++QGT S KT +EV G
Sbjct: 1 MPTVGLFNKEGNKIEDIQLNDKVFAVEVNADAMHQVVVALLANKRQGTQSAKTRAEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
G KPWRQKGTGRAR G++R PQ W A KP
Sbjct: 61 GIKPWRQKGTGRARQGSIRAPQ-WIKGGVVFAPKP 94
>gi|325964165|ref|YP_004242071.1| 50S ribosomal protein L4P [Arthrobacter phenanthrenivorans Sphe3]
gi|323470252|gb|ADX73937.1| LSU ribosomal protein L4P [Arthrobacter phenanthrenivorans Sphe3]
Length = 207
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FDV ++H+VV QLA +QGTH TKT +EVSG G+KP++QKGTGRAR G++
Sbjct: 9 LPAEIFDVQTNVPLLHQVVVAQLAAARQGTHKTKTRAEVSGAGRKPFKQKGTGRARQGSI 68
Query: 176 RGPQ 179
R P
Sbjct: 69 RAPH 72
>gi|19551747|ref|NP_599749.1| 50S ribosomal protein L4 [Corynebacterium glutamicum ATCC 13032]
gi|62389402|ref|YP_224804.1| 50S ribosomal protein L4 [Corynebacterium glutamicum ATCC 13032]
gi|145294658|ref|YP_001137479.1| 50S ribosomal protein L4 [Corynebacterium glutamicum R]
gi|417969720|ref|ZP_12610656.1| 50S ribosomal protein L4 [Corynebacterium glutamicum S9114]
gi|418244690|ref|ZP_12871104.1| 50S ribosomal protein L4 [Corynebacterium glutamicum ATCC 14067]
gi|46577275|sp|Q8NT08.1|RL4_CORGL RecName: Full=50S ribosomal protein L4
gi|166234660|sp|A4QBI0.1|RL4_CORGB RecName: Full=50S ribosomal protein L4
gi|21323272|dbj|BAB97900.1| Ribosomal protein L4 [Corynebacterium glutamicum ATCC 13032]
gi|41324736|emb|CAF19218.1| 50S RIBOSOMAL PROTEIN L4 [Corynebacterium glutamicum ATCC 13032]
gi|140844578|dbj|BAF53577.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344045824|gb|EGV41493.1| 50S ribosomal protein L4 [Corynebacterium glutamicum S9114]
gi|354511199|gb|EHE84114.1| 50S ribosomal protein L4 [Corynebacterium glutamicum ATCC 14067]
gi|385142670|emb|CCH23709.1| 50S ribosomal protein L4 [Corynebacterium glutamicum K051]
Length = 218
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 48/69 (69%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
G + L ++FD + ++H+VV QLA +QGTHSTKT EV G G+KP+RQKGTGRA
Sbjct: 16 NGSVELPAEIFDREVSVALLHQVVNAQLAAARQGTHSTKTRGEVRGGGRKPFRQKGTGRA 75
Query: 171 RHGTLRGPQ 179
R G++R P
Sbjct: 76 RQGSIRAPH 84
>gi|227501135|ref|ZP_03931184.1| ribosomal protein L4 [Anaerococcus tetradius ATCC 35098]
gi|227216720|gb|EEI82121.1| ribosomal protein L4 [Anaerococcus tetradius ATCC 35098]
Length = 207
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E+ G + L +F+ I + ++ VV+ QLA ++QGT S KT SEV G G+K
Sbjct: 4 VDILNIKGENVGSLELNETLFNTEISEHAVYEVVKNQLANKRQGTQSAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G++R P
Sbjct: 64 PFRQKGTGRARQGSIRAPH 82
>gi|451817060|ref|YP_007453261.1| 50S ribosomal protein L4 [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451783039|gb|AGF54007.1| 50S ribosomal protein L4 [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 206
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNEDKGF---MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ M L VF I + +H+VV LA ++QGT STKT SEV G
Sbjct: 1 MPTVGVFNKEGNKVADMELNESVFAAEINEYALHQVVVALLANKRQGTQSTKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G KPWRQKGTGRAR G++R PQ
Sbjct: 61 GIKPWRQKGTGRARQGSIRAPQ 82
>gi|407797891|ref|ZP_11144806.1| 50S ribosomal protein L4 [Salimicrobium sp. MJ3]
gi|407017654|gb|EKE30411.1| 50S ribosomal protein L4 [Salimicrobium sp. MJ3]
Length = 207
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN+ G + L VF + ++H V Q A ++QGTH KT EVSG
Sbjct: 1 MPKVALFNQSGSKVGDLDLNDAVFGIEPNTHVLHETVLMQQASKRQGTHKVKTRGEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR GT+R PQ
Sbjct: 61 GRKPWRQKGTGRARQGTIRAPQ 82
>gi|366163748|ref|ZP_09463503.1| 50S ribosomal protein L4 [Acetivibrio cellulolyticus CD2]
Length = 207
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ VF + + K+++H+ V QLA ++QGT STKT SEV G G KPW+QKGTGRAR
Sbjct: 15 GDIDLSEAVFGIDVNKEVVHQAVVNQLANKRQGTQSTKTKSEVRGGGIKPWKQKGTGRAR 74
Query: 172 HGTLRGPQ 179
G++R Q
Sbjct: 75 QGSIRSAQ 82
>gi|365825952|ref|ZP_09367900.1| 50S ribosomal protein L4 [Actinomyces graevenitzii C83]
gi|365257433|gb|EHM87477.1| 50S ribosomal protein L4 [Actinomyces graevenitzii C83]
Length = 214
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + + E G L ++FDV ++H+VV QLA +QGTH+TKT V G G+K
Sbjct: 7 VDIVDSKGEKTGTAALPAEIFDVETNIALMHQVVTAQLAAARQGTHATKTRGMVRGGGRK 66
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G+ R PQ
Sbjct: 67 PYRQKGTGRARQGSTRAPQ 85
>gi|329850208|ref|ZP_08265053.1| 50S ribosomal protein L4 [Asticcacaulis biprosthecum C19]
gi|328840523|gb|EGF90094.1| 50S ribosomal protein L4 [Asticcacaulis biprosthecum C19]
Length = 210
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 112 GFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
G + L+ VF + IR DI+HRVV WQLAKR+ GTH +T +E S TGKK ++QKG+G A
Sbjct: 14 GSVELSDLVFGISDIRADILHRVVNWQLAKRRAGTHKVQTRNENSRTGKKMYKQKGSGGA 73
Query: 171 RHGTLRGPQ 179
RHG+ R PQ
Sbjct: 74 RHGSRRAPQ 82
>gi|163760800|ref|ZP_02167879.1| 50S ribosomal protein L4 [Hoeflea phototrophica DFL-43]
gi|162281844|gb|EDQ32136.1| 50S ribosomal protein L4 [Hoeflea phototrophica DFL-43]
Length = 206
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ VT + G + L+ +F + R+D+I R+VRWQLAK+QQG H T SE+S TG K
Sbjct: 3 LTVTTLEGKSAGKISLSDAIFGLEPRQDLIQRIVRWQLAKKQQGGHKTLGRSEISRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
++QKGTGRARH PQ
Sbjct: 63 MFKQKGTGRARHHAASAPQ 81
>gi|452955096|gb|EME60496.1| 50S ribosomal protein L4 [Amycolatopsis decaplanina DSM 44594]
Length = 228
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 47/68 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDV ++H+VV QLA +QGTH TKT EV G GKKP+RQKGTGRAR
Sbjct: 15 GTVELPSEIFDVQANVPLMHQVVVAQLAAARQGTHDTKTRGEVRGGGKKPYRQKGTGRAR 74
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 75 QGSTRAPQ 82
>gi|291280147|ref|YP_003496982.1| 50S ribosomal protein L4 [Deferribacter desulfuricans SSM1]
gi|290754849|dbj|BAI81226.1| 50S ribosomal protein L4 [Deferribacter desulfuricans SSM1]
Length = 209
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 51/79 (64%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
VI V N N+ + L + P++ ++H VV QLA R+ GTHSTKT EV G G+
Sbjct: 3 VIEVLNQENKKVKEVNLDDSIISYPVKPWLMHEVVVMQLACRRAGTHSTKTRGEVRGGGR 62
Query: 160 KPWRQKGTGRARHGTLRGP 178
KPWRQKGTGRAR G++R P
Sbjct: 63 KPWRQKGTGRARAGSIRSP 81
>gi|260425505|ref|ZP_05779485.1| ribosomal protein, L4/L1 family [Citreicella sp. SE45]
gi|260423445|gb|EEX16695.1| ribosomal protein, L4/L1 family [Citreicella sp. SE45]
Length = 205
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 47/67 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD+ R DI+HRVVRWQ K Q GTH KT SEVS + KK +RQKGTG AR
Sbjct: 14 GEVELTDEIFDLEPRADILHRVVRWQRNKAQAGTHKVKTRSEVSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGP 178
HG+ + P
Sbjct: 74 HGSRKAP 80
>gi|417002533|ref|ZP_11941916.1| 50S ribosomal protein L4 [Anaerococcus prevotii ACS-065-V-Col13]
gi|325479201|gb|EGC82298.1| 50S ribosomal protein L4 [Anaerococcus prevotii ACS-065-V-Col13]
Length = 207
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E+ G + L +F+ I + ++ VV+ QLA ++QGT S KT SEV G G+K
Sbjct: 4 VDILNIKGENVGSLELNETLFNTEISEHTVYEVVKNQLANKRQGTQSAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G++R P
Sbjct: 64 PFRQKGTGRARQGSIRAPH 82
>gi|171741272|ref|ZP_02917079.1| hypothetical protein BIFDEN_00347 [Bifidobacterium dentium ATCC
27678]
gi|283455367|ref|YP_003359931.1| 50S ribosomal protein L4 [Bifidobacterium dentium Bd1]
gi|306823567|ref|ZP_07456942.1| ribosomal protein L4/L1 family protein [Bifidobacterium dentium
ATCC 27679]
gi|309802989|ref|ZP_07697090.1| 50S ribosomal protein L4 [Bifidobacterium dentium JCVIHMP022]
gi|171276886|gb|EDT44547.1| 50S ribosomal protein L4 [Bifidobacterium dentium ATCC 27678]
gi|283102001|gb|ADB09107.1| rplD 50S ribosomal protein L4 [Bifidobacterium dentium Bd1]
gi|304553274|gb|EFM41186.1| ribosomal protein L4/L1 family protein [Bifidobacterium dentium
ATCC 27679]
gi|308220456|gb|EFO76767.1| 50S ribosomal protein L4 [Bifidobacterium dentium JCVIHMP022]
Length = 221
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 6/91 (6%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVF-----DVPIRKDIIHRVVRWQLAKRQQGTHSTKTIS 152
++ + VT+ + G + ++F +V R +IH+VV QLA +QGTH+TKT
Sbjct: 3 NVTLNVTDKQGKAAGTVEAPAEIFGFSAEEVQSRIPLIHQVVVAQLAAARQGTHATKTRG 62
Query: 153 EVSGTGKKPWRQKGTGRARHGTLRGPQGWYY 183
VSG G+KPW+QKGTGRAR G++R PQ WY+
Sbjct: 63 MVSGGGRKPWKQKGTGRARQGSIRAPQ-WYH 92
>gi|145225624|ref|YP_001136302.1| 50S ribosomal protein L4 [Mycobacterium gilvum PYR-GCK]
gi|315445977|ref|YP_004078856.1| 50S ribosomal protein L4P [Mycobacterium gilvum Spyr1]
gi|145218110|gb|ABP47514.1| LSU ribosomal protein L4P [Mycobacterium gilvum PYR-GCK]
gi|315264280|gb|ADU01022.1| LSU ribosomal protein L4P [Mycobacterium gilvum Spyr1]
Length = 218
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
D+V P + G + L +FD ++H+VV QLA ++QGTH+TKT + VSG
Sbjct: 7 DVVTPA----GKKDGTVELPAALFDAEPNIALMHQVVTAQLAAKRQGTHATKTRAMVSGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
GKKP+RQKGTGRAR G+ R PQ
Sbjct: 63 GKKPYRQKGTGRARQGSTRAPQ 84
>gi|331091666|ref|ZP_08340500.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 2_1_46FAA]
gi|330403423|gb|EGG82982.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 2_1_46FAA]
Length = 206
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 49/79 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGNEVGTIDLNDAVFGVEVNEHLLHMAVVNQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|326792606|ref|YP_004310427.1| 50S ribosomal protein L4/L1e [Clostridium lentocellum DSM 5427]
gi|326543370|gb|ADZ85229.1| ribosomal protein L4/L1e [Clostridium lentocellum DSM 5427]
Length = 207
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L +F V +++ ++H+ V LA R+QGT S KT +EV G G+K
Sbjct: 4 VAVLNMTGAQVGEVELNDSIFAVEVKEHLVHQAVVAHLANRRQGTQSAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PW+QKGTGRAR G++R Q W + A KP
Sbjct: 64 PWKQKGTGRARQGSIRAVQ-WVGGGVAFAPKP 94
>gi|375091979|ref|ZP_09738266.1| 50S ribosomal protein L4 [Helcococcus kunzii ATCC 51366]
gi|374562197|gb|EHR33529.1| 50S ribosomal protein L4 [Helcococcus kunzii ATCC 51366]
Length = 207
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L +F I + +++ VV+ QLA ++QGT S KT +EV G GKKPWRQKGTGRAR
Sbjct: 15 GNIDLPESLFGSEINEHVVYEVVKNQLANKRQGTQSAKTRAEVRGGGKKPWRQKGTGRAR 74
Query: 172 HGTLRGPQ 179
G++R PQ
Sbjct: 75 QGSIRSPQ 82
>gi|406943790|gb|EKD75703.1| 50S ribosomal protein L4 [uncultured bacterium]
Length = 204
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 48/70 (68%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
+ K +VLA VF + +IH+VV QLA R+ GT + KT SEVSG G KPWRQKGTG
Sbjct: 7 DTKKQLVLADSVFGCEFNESLIHQVVTAQLAHRRAGTKAQKTRSEVSGGGVKPWRQKGTG 66
Query: 169 RARHGTLRGP 178
RAR GT+R P
Sbjct: 67 RARAGTIRSP 76
>gi|210611126|ref|ZP_03288740.1| hypothetical protein CLONEX_00930 [Clostridium nexile DSM 1787]
gi|210152113|gb|EEA83120.1| hypothetical protein CLONEX_00930 [Clostridium nexile DSM 1787]
Length = 206
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVGTIDLNDAVFGVEVNEHLLHMAVVNQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|451340312|ref|ZP_21910809.1| LSU ribosomal protein L4p (L1e) [Amycolatopsis azurea DSM 43854]
gi|449416868|gb|EMD22570.1| LSU ribosomal protein L4p (L1e) [Amycolatopsis azurea DSM 43854]
Length = 228
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 47/68 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDV ++H+VV QLA +QGTH TKT EV G GKKP+RQKGTGRAR
Sbjct: 15 GTVELPSEIFDVQANVPLMHQVVVGQLAAARQGTHDTKTRGEVRGGGKKPYRQKGTGRAR 74
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 75 QGSTRAPQ 82
>gi|410727963|ref|ZP_11366156.1| 50S ribosomal protein L4, bacterial/organelle [Clostridium sp.
Maddingley MBC34-26]
gi|410597523|gb|EKQ52134.1| 50S ribosomal protein L4, bacterial/organelle [Clostridium sp.
Maddingley MBC34-26]
Length = 206
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNEDKGF---MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ M L VF I + +H+VV LA ++QGT STKT SEV G
Sbjct: 1 MPTVGVFNKEGNKVADMELNESVFAAEINEYALHQVVVALLANKRQGTQSTKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G KPWRQKGTGRAR G++R PQ
Sbjct: 61 GIKPWRQKGTGRARQGSIRSPQ 82
>gi|227871801|ref|ZP_03990205.1| ribosomal protein L4 [Oribacterium sinus F0268]
gi|227842364|gb|EEJ52590.1| ribosomal protein L4 [Oribacterium sinus F0268]
Length = 206
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G M L +F P+ + ++H V QLA ++QGT T +EVSG G+K
Sbjct: 4 VSVFNMQGKEVGKMDLNDAIFAAPVHEHLLHLAVVAQLANKRQGTQKALTRAEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G++R PQ
Sbjct: 64 PWRQKGTGHARQGSIRAPQ 82
>gi|359773384|ref|ZP_09276781.1| 50S ribosomal protein L4 [Gordonia effusa NBRC 100432]
gi|359309509|dbj|GAB19559.1| 50S ribosomal protein L4 [Gordonia effusa NBRC 100432]
Length = 220
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 51/82 (62%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V + G + L ++FD ++H+VV Q A +QGTHSTKT EVSG
Sbjct: 8 NLTLDVKTVDGKTNGTVELPAEIFDATANIALMHQVVIAQQAAARQGTHSTKTRGEVSGG 67
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G KP+RQKGTGRAR G+ R PQ
Sbjct: 68 GAKPYRQKGTGRARQGSTRAPQ 89
>gi|331004122|ref|ZP_08327602.1| 50S ribosomal protein L4 [Lachnospiraceae oral taxon 107 str.
F0167]
gi|402312693|ref|ZP_10831617.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium ICM7]
gi|404483000|ref|ZP_11018225.1| 50S ribosomal protein L4 [Clostridiales bacterium OBRC5-5]
gi|330411532|gb|EGG90942.1| 50S ribosomal protein L4 [Lachnospiraceae oral taxon 107 str.
F0167]
gi|400369151|gb|EJP22154.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium ICM7]
gi|404344090|gb|EJZ70449.1| 50S ribosomal protein L4 [Clostridiales bacterium OBRC5-5]
Length = 206
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 ISVFNIEGKEVGSIELNDAVFGVNVNEHLVHMAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PW+QKGTG AR G+ R PQ
Sbjct: 64 PWKQKGTGHARQGSTRSPQ 82
>gi|399924274|ref|ZP_10781632.1| 50S ribosomal protein L4 [Peptoniphilus rhinitidis 1-13]
Length = 207
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L+ +FD P+ ++ VV+ LA ++QGTHS KT +EV G G+KPWRQKGTGRAR G++
Sbjct: 19 LSEGLFDAPVSTHAVYLVVKNILANQRQGTHSAKTRAEVRGGGRKPWRQKGTGRARQGSI 78
Query: 176 RGPQGWYYNARSKAQKP 192
R PQ W A+KP
Sbjct: 79 RSPQ-WRGGGVVFAKKP 94
>gi|419719246|ref|ZP_14246532.1| 50S ribosomal protein L4 [Lachnoanaerobaculum saburreum F0468]
gi|383304572|gb|EIC95971.1| 50S ribosomal protein L4 [Lachnoanaerobaculum saburreum F0468]
Length = 206
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 ISVFNIEGKEVGSIELNDAVFGVNVNEHLVHMAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PW+QKGTG AR G+ R PQ
Sbjct: 64 PWKQKGTGHARQGSTRSPQ 82
>gi|154245624|ref|YP_001416582.1| 50S ribosomal protein L4 [Xanthobacter autotrophicus Py2]
gi|226731446|sp|A7IFY2.1|RL4_XANP2 RecName: Full=50S ribosomal protein L4
gi|154159709|gb|ABS66925.1| ribosomal protein L4/L1e [Xanthobacter autotrophicus Py2]
Length = 206
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V + G + L+ ++F + R DI+HR V WQL++RQ GTH TK SE++ T KK
Sbjct: 3 ITVKTLDGIEAGSVTLSDEIFGLEPRADILHRCVTWQLSRRQAGTHRTKGRSEINRTSKK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
++QKGTG ARHG PQ
Sbjct: 63 MYKQKGTGNARHGAASAPQ 81
>gi|315652353|ref|ZP_07905345.1| 50S ribosomal protein L4 [Lachnoanaerobaculum saburreum DSM 3986]
gi|315485476|gb|EFU75866.1| 50S ribosomal protein L4 [Lachnoanaerobaculum saburreum DSM 3986]
Length = 206
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 ISVFNIEGKEVGSIELNDAVFGVNVNEHLVHMAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PW+QKGTG AR G+ R PQ
Sbjct: 64 PWKQKGTGHARQGSTRSPQ 82
>gi|302536252|ref|ZP_07288594.1| 50S ribosomal protein L4 [Streptomyces sp. C]
gi|302445147|gb|EFL16963.1| 50S ribosomal protein L4 [Streptomyces sp. C]
Length = 216
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + + G + L ++FD +IH+VV QLA +QGTH TKT EV G GKK
Sbjct: 4 IDILSPAGDKAGTVELPAEIFDAKTSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G+ R PQ
Sbjct: 64 PYRQKGTGRARQGSTRAPQ 82
>gi|408828968|ref|ZP_11213858.1| 50S ribosomal protein L4 [Streptomyces somaliensis DSM 40738]
Length = 220
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + + G + L ++FD +IH+VV QLA +QGTH TKT EV G GKK
Sbjct: 4 IDILSPAGDKAGTVELPAEIFDAKTSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G+ R PQ
Sbjct: 64 PYRQKGTGRARQGSTRAPQ 82
>gi|410582520|ref|ZP_11319626.1| 50S ribosomal protein L4, bacterial/organelle [Thermaerobacter
subterraneus DSM 13965]
gi|410505340|gb|EKP94849.1| 50S ribosomal protein L4, bacterial/organelle [Thermaerobacter
subterraneus DSM 13965]
Length = 212
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 53/79 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G + L+ VF P+R+ ++H+ V LA +++GT +TKT VSG G+K
Sbjct: 4 VAVYNTQGERVGEIELSDAVFGAPVREALMHQAVVRYLANQRRGTAATKTRGMVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G++R PQ
Sbjct: 64 PWRQKGTGRARQGSIRAPQ 82
>gi|407771094|ref|ZP_11118457.1| 50S ribosomal protein L4 [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407285983|gb|EKF11476.1| 50S ribosomal protein L4 [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 206
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + LA ++F + +R+DI+HR+V WQLAKR+ GTH K SE+S T KK RQKG+G AR
Sbjct: 14 GNIDLAEEIFGLDVRRDILHRMVNWQLAKRRAGTHKVKEKSEISATTKKFVRQKGSGGAR 73
Query: 172 HGTLRGPQ 179
HG+ + Q
Sbjct: 74 HGSRKAVQ 81
>gi|358065650|ref|ZP_09152186.1| 50S ribosomal protein L4 [Clostridium hathewayi WAL-18680]
gi|356696136|gb|EHI57759.1| 50S ribosomal protein L4 [Clostridium hathewayi WAL-18680]
Length = 206
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V I + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNMEGKEVGTLELNDAVFGVEINEHLVHLSVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PW+QKGTG AR G+ R PQ
Sbjct: 64 PWKQKGTGHARQGSTRSPQ 82
>gi|75675557|ref|YP_317978.1| 50S ribosomal protein L4 [Nitrobacter winogradskyi Nb-255]
gi|109893613|sp|Q3SSW5.1|RL4_NITWN RecName: Full=50S ribosomal protein L4
gi|74420427|gb|ABA04626.1| LSU ribosomal protein L4P [Nitrobacter winogradskyi Nb-255]
Length = 206
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT + G + L+ +F + RKD+I R V WQLAK Q GTH TK +E+ TG
Sbjct: 1 MELNVTTLEGKAAGSVHLSDGIFGLEPRKDLIQRCVNWQLAKSQAGTHKTKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KK ++QKGTG ARHG+ R PQ
Sbjct: 61 KKLFKQKGTGNARHGSARAPQ 81
>gi|348533363|ref|XP_003454175.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like
[Oreochromis niloticus]
Length = 302
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 28/145 (19%)
Query: 58 ASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPD------------ITIGLHQDLVIP--- 102
+++F++++ S+E A P +LLL ++ PD + + D +P
Sbjct: 13 VAKRFASSL----SNESALPPNLLLPTNLVDPDRLKRPPPPADSSLPLLRKCDAAVPAHL 68
Query: 103 ------VTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISE 153
V + +D G L DVF VP R DI+H V WQ ++ TK SE
Sbjct: 69 TPVQTWVESLERQDSEPLGVAQLHPDVFAVPPRLDILHSVETWQRNYKRISHAHTKVRSE 128
Query: 154 VSGTGKKPWRQKGTGRARHGTLRGP 178
VSG G+KPW+QKG+GRARHG++R P
Sbjct: 129 VSGGGRKPWKQKGSGRARHGSIRSP 153
>gi|354612833|ref|ZP_09030773.1| ribosomal protein L4/L1e [Saccharomonospora paurometabolica YIM
90007]
gi|353222797|gb|EHB87094.1| ribosomal protein L4/L1e [Saccharomonospora paurometabolica YIM
90007]
Length = 226
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V E G + L ++FDV ++H+VV QLA +QGTH TKT +V G G+K
Sbjct: 5 VEVKTPAGEAGGTVELPAEIFDVQANIPLMHQVVVAQLAAARQGTHETKTRGDVRGGGRK 64
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G++R PQ
Sbjct: 65 PYRQKGTGRARQGSVRAPQ 83
>gi|316933528|ref|YP_004108510.1| 50S ribosomal protein L4 [Rhodopseudomonas palustris DX-1]
gi|315601242|gb|ADU43777.1| ribosomal protein L4/L1e [Rhodopseudomonas palustris DX-1]
Length = 206
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ VT + G + L+ ++F + R DII R V WQLAKRQ GTH K +EV TGKK
Sbjct: 3 LKVTTLEGNEAGSVQLSDEIFGLEPRTDIIQRCVIWQLAKRQAGTHKAKGRAEVWRTGKK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
++QKGTG ARHG+ R PQ
Sbjct: 63 MYKQKGTGGARHGSQRVPQ 81
>gi|317507410|ref|ZP_07965144.1| ribosomal protein L4/L1 family protein [Segniliparus rugosus ATCC
BAA-974]
gi|316254295|gb|EFV13631.1| ribosomal protein L4/L1 family protein [Segniliparus rugosus ATCC
BAA-974]
Length = 218
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + + + G L ++FD P ++H+VV QLA +QGTH KT EVSG G
Sbjct: 3 LTVTIHAADGKSAGTFDLPAEIFDAPANISLLHQVVTAQLAAARQGTHKAKTRGEVSGGG 62
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KKP++QKGTGRAR G+ R P
Sbjct: 63 KKPYKQKGTGRARQGSTRAPH 83
>gi|157363443|ref|YP_001470210.1| 50S ribosomal protein L4 [Thermotoga lettingae TMO]
gi|166990954|sp|A8F4R2.1|RL4_THELT RecName: Full=50S ribosomal protein L4
gi|157314047|gb|ABV33146.1| ribosomal protein L4/L1e [Thermotoga lettingae TMO]
Length = 226
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
V+ + N E G L D+F++ D++ R V +QL+ R+ GT STKT SEVSG G+
Sbjct: 3 VVDLYNMKGEKVGTQELKDDIFNIEPNFDVMWRYVDYQLSLRRAGTVSTKTRSEVSGGGR 62
Query: 160 KPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
KPW QK TGRARHG++R P W + + KP
Sbjct: 63 KPWIQKHTGRARHGSIRSPI-WRHGGVAHGPKP 94
>gi|373106847|ref|ZP_09521147.1| 50S ribosomal protein L4 [Stomatobaculum longum]
gi|371651786|gb|EHO17212.1| 50S ribosomal protein L4 [Stomatobaculum longum]
Length = 206
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNTDGKEVGTIELNDAVFGVELNEHLVHMAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|229829428|ref|ZP_04455497.1| hypothetical protein GCWU000342_01518 [Shuttleworthia satelles DSM
14600]
gi|229791859|gb|EEP27973.1| hypothetical protein GCWU000342_01518 [Shuttleworthia satelles DSM
14600]
Length = 206
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 48/79 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ M LA VF V + ++H V QLA ++QGT KT SEV G G+K
Sbjct: 4 VSVFNMEGKEVEQMELADSVFGVEVNDHLVHMAVLQQLANKRQGTQKAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|359410071|ref|ZP_09202536.1| ribosomal protein L4/L1e [Clostridium sp. DL-VIII]
gi|357168955|gb|EHI97129.1| ribosomal protein L4/L1e [Clostridium sp. DL-VIII]
Length = 206
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ M L VF + + +H+VV LA ++QGT STKT SEV G
Sbjct: 1 MPTVGVFNKEGKKVADMELNESVFAAEVNEYALHQVVVALLANKRQGTQSTKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G KPWRQKGTGRAR G++R PQ
Sbjct: 61 GIKPWRQKGTGRARQGSIRAPQ 82
>gi|336319936|ref|YP_004599904.1| ribosomal protein L4/L1e [[Cellvibrio] gilvus ATCC 13127]
gi|336103517|gb|AEI11336.1| ribosomal protein L4/L1e [[Cellvibrio] gilvus ATCC 13127]
Length = 230
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 50/81 (61%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V + + G L +VFD +IH+VV QLA +QGTH TKT EV G G
Sbjct: 5 LTVDVLDPQGKKAGTADLPAEVFDAQTNIPLIHQVVVAQLAAARQGTHDTKTRGEVRGGG 64
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KKP++QKGTGRAR G+ R PQ
Sbjct: 65 KKPYKQKGTGRARQGSTRAPQ 85
>gi|291542036|emb|CBL15146.1| LSU ribosomal protein L4P [Ruminococcus bromii L2-63]
Length = 207
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + ++ G + LA VF + ++H++V LA ++QGT S T SEVSG GKK
Sbjct: 4 LAVVDMEGKNVGTIELAESVFGIEPNAAVMHQMVVNYLAAQRQGTQSALTRSEVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PWRQKGTGRAR G+ R PQ W + A KP
Sbjct: 64 PWRQKGTGRARQGSTRAPQ-WTHGGVVFAPKP 94
>gi|150392159|ref|YP_001322208.1| 50S ribosomal protein L4 [Alkaliphilus metalliredigens QYMF]
gi|166990944|sp|A6TWI1.1|RL4_ALKMQ RecName: Full=50S ribosomal protein L4
gi|149952021|gb|ABR50549.1| ribosomal protein L4/L1e [Alkaliphilus metalliredigens QYMF]
Length = 207
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + M L+ ++F V + + +++ V+ QLA ++QGT S KT +EV G G+K
Sbjct: 4 VAVYNVSGQKVSEMELSENIFGVEVNEHVLYEAVKNQLANKRQGTQSAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PW+QKGTGRAR GT+R P
Sbjct: 64 PWKQKGTGRARAGTIRSP 81
>gi|295394347|ref|ZP_06804572.1| ribosomal protein L4/L1 family protein [Brevibacterium mcbrellneri
ATCC 49030]
gi|294972805|gb|EFG48655.1| ribosomal protein L4/L1 family protein [Brevibacterium mcbrellneri
ATCC 49030]
Length = 223
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 52/85 (61%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ ++L + + + + G L +FD +IH+VV QLA +QGTH KT SEV
Sbjct: 1 MSENLTVDILDAKGKKAGSAELPASIFDQKTNVPLIHQVVVAQLAASRQGTHKAKTRSEV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
G G+KP+RQKGTG AR G++R PQ
Sbjct: 61 RGGGRKPYRQKGTGNARQGSIRAPQ 85
>gi|336326438|ref|YP_004606404.1| 50S ribosomal protein L4 [Corynebacterium resistens DSM 45100]
gi|336102420|gb|AEI10240.1| 50S ribosomal protein L4 [Corynebacterium resistens DSM 45100]
Length = 217
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V + G + L +FD + ++H+VV QLA ++QGTH+TK +V G
Sbjct: 3 NLKLDVHTADGKTNGSVELPASIFDAEVSVALMHQVVTAQLAAKRQGTHATKARGDVRGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R P
Sbjct: 63 GRKPWRQKGTGRARQGSIRAPH 84
>gi|334564057|ref|ZP_08517048.1| 50S ribosomal protein L4 [Corynebacterium bovis DSM 20582]
Length = 221
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
G + L +FDV + ++H+VV QLA ++QGTH+TKT EV G G+KP+RQKGTGRA
Sbjct: 16 NGTVDLPASIFDVEVSVPLMHQVVVAQLAAKRQGTHATKTRGEVRGGGRKPFRQKGTGRA 75
Query: 171 RHGTLRGPQ 179
R G++R P
Sbjct: 76 RQGSIRAPH 84
>gi|170780734|ref|YP_001709066.1| 50S ribosomal protein L4 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155302|emb|CAQ00405.1| 50S ribosomal protein L4 [Clavibacter michiganensis subsp.
sepedonicus]
Length = 218
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 47/68 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L +FDV +IH+VV QLA +QGTH TK EVSG G+KP++QKGTGRAR
Sbjct: 18 GSVDLPASIFDVQTNVPLIHQVVVAQLAAARQGTHKTKGRGEVSGAGRKPFKQKGTGRAR 77
Query: 172 HGTLRGPQ 179
G++R PQ
Sbjct: 78 QGSIRAPQ 85
>gi|425735736|ref|ZP_18854048.1| 50S ribosomal protein L4P [Brevibacterium casei S18]
gi|425479328|gb|EKU46505.1| 50S ribosomal protein L4P [Brevibacterium casei S18]
Length = 217
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + G + L +VF V +IH+VV QLA +QGTH TKT SEV G G+K
Sbjct: 7 VDVVDATGAKTGSVDLPAEVFGVQTNVPLIHQVVVAQLAAARQGTHKTKTRSEVRGGGRK 66
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPC 193
P+RQKGTG AR G++R PQ YN P
Sbjct: 67 PYRQKGTGNARQGSIRAPQ---YNGGGIVHGPV 96
>gi|240145877|ref|ZP_04744478.1| ribosomal protein L4/L1 family protein [Roseburia intestinalis
L1-82]
gi|257202026|gb|EEV00311.1| ribosomal protein L4/L1 family protein [Roseburia intestinalis
L1-82]
gi|291535431|emb|CBL08543.1| LSU ribosomal protein L4P [Roseburia intestinalis M50/1]
Length = 206
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA +QGT KT SEV G G+K
Sbjct: 4 VAVYNMEGKEVGSLELNDAVFGVEVNEHLVHMAVLQQLANNRQGTQKAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYY 183
PWRQKGTG AR G+ R PQ W +
Sbjct: 64 PWRQKGTGHARQGSTRAPQ-WTH 85
>gi|418057098|ref|ZP_12695146.1| ribosomal protein L4/L1e [Hyphomicrobium denitrificans 1NES1]
gi|353204799|gb|EHB70211.1| ribosomal protein L4/L1e [Hyphomicrobium denitrificans 1NES1]
Length = 205
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
VTN G + LA ++F + +R D+IHR+VR+Q KR GTH + SEV+ TGKK
Sbjct: 5 VTNLDASKAGDIDLADEIFGLEVRNDLIHRMVRYQTLKRMAGTHHAQDRSEVAVTGKKMT 64
Query: 163 RQKGTGRARHGTLRGPQ 179
+QKGTG ARHG PQ
Sbjct: 65 KQKGTGGARHGDKSAPQ 81
>gi|121534760|ref|ZP_01666581.1| ribosomal protein L4/L1e [Thermosinus carboxydivorans Nor1]
gi|121306780|gb|EAX47701.1| ribosomal protein L4/L1e [Thermosinus carboxydivorans Nor1]
Length = 208
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + G + L+ VF V + K ++H+ V QLA ++ GTH+TKT V G GKK
Sbjct: 4 VAVYDITGAQTGEIELSDSVFGVEVNKAVLHQAVVMQLANQRLGTHATKTRGMVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRAR G++R P
Sbjct: 64 PWRQKGTGRARAGSIRSP 81
>gi|312144246|ref|YP_003995692.1| 50S ribosomal protein L4 [Halanaerobium hydrogeniformans]
gi|311904897|gb|ADQ15338.1| ribosomal protein L4/L1e [Halanaerobium hydrogeniformans]
Length = 209
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L VF+ I + ++H+VV QLA R+ GT STK + V G G+KPWRQKGTGRARHG++
Sbjct: 19 LNDSVFNNKINEHVVHQVVNAQLAARRSGTASTKNRANVRGGGRKPWRQKGTGRARHGSI 78
Query: 176 RGP 178
R P
Sbjct: 79 RSP 81
>gi|300022542|ref|YP_003755153.1| 50S ribosomal protein L4/L1e [Hyphomicrobium denitrificans ATCC
51888]
gi|299524363|gb|ADJ22832.1| ribosomal protein L4/L1e [Hyphomicrobium denitrificans ATCC 51888]
Length = 205
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
VTN G + LA ++F + +R D+IHR+VR+Q KR GTH + SEV+ TGKK
Sbjct: 5 VTNLDASKAGDIDLADEIFGLEVRNDLIHRMVRYQTLKRMAGTHHAQDRSEVAVTGKKMT 64
Query: 163 RQKGTGRARHGTLRGPQ 179
+QKGTG ARHG PQ
Sbjct: 65 KQKGTGGARHGDKSAPQ 81
>gi|353328464|ref|ZP_08970791.1| 50S ribosomal protein L4 [Wolbachia endosymbiont wVitB of Nasonia
vitripennis]
gi|373449860|ref|ZP_09541953.1| 50S ribosomal subunit protein L4 [Wolbachia pipientis wAlbB]
gi|371932905|emb|CCE76940.1| 50S ribosomal subunit protein L4 [Wolbachia pipientis wAlbB]
Length = 204
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ + N + G + L +F + I+H +VRWQLAKR+ G H TK IS+VSGT KP+
Sbjct: 5 LVDLSNNNVGSVELNPLIFSAKQKLSILHDIVRWQLAKRRVGAHKTKGISDVSGTTAKPY 64
Query: 163 RQKGTGRARHGTLRGPQ 179
QK TGRAR G+LR PQ
Sbjct: 65 GQKRTGRARQGSLRSPQ 81
>gi|260905720|ref|ZP_05914042.1| LSU ribosomal protein L4P [Brevibacterium linens BL2]
Length = 217
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + G + L ++F V +IH+VV QLA +QGTH TKT SEV G G+K
Sbjct: 7 VDVVDAAGAKTGSVELPAEIFGVQTNVPLIHQVVVAQLAAARQGTHKTKTRSEVRGGGRK 66
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKPC 193
P+RQKGTG AR G++R PQ YN P
Sbjct: 67 PYRQKGTGNARQGSIRAPQ---YNGGGVVHGPV 96
>gi|313140866|ref|ZP_07803059.1| ribosomal protein L4 [Bifidobacterium bifidum NCIMB 41171]
gi|313133376|gb|EFR50993.1| ribosomal protein L4 [Bifidobacterium bifidum NCIMB 41171]
Length = 221
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 6/91 (6%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVF-----DVPIRKDIIHRVVRWQLAKRQQGTHSTKTIS 152
++ + VT+ + G + + ++F +V +IH+VV QLA +QGTH+TKT
Sbjct: 3 NVTLNVTDGKGQATGSVEVPAELFGHTADEVQAHVPLIHQVVVAQLAAARQGTHATKTRG 62
Query: 153 EVSGTGKKPWRQKGTGRARHGTLRGPQGWYY 183
VSG GKKPW+QKGTGRAR G++R PQ WY+
Sbjct: 63 MVSGGGKKPWKQKGTGRARQGSIRAPQ-WYH 92
>gi|134103263|ref|YP_001108924.1| 50S ribosomal protein L4 [Saccharopolyspora erythraea NRRL 2338]
gi|291007944|ref|ZP_06565917.1| 50S ribosomal protein L4 [Saccharopolyspora erythraea NRRL 2338]
gi|166990952|sp|A4FPM4.1|RL4_SACEN RecName: Full=50S ribosomal protein L4
gi|133915886|emb|CAM05999.1| 50S ribosomal protein L4 [Saccharopolyspora erythraea NRRL 2338]
Length = 228
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 49/68 (72%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDV ++H+VV QLA +QGTH+TKT +VSG GKKP+RQKGTG AR
Sbjct: 16 GTVELPAEIFDVQANIALMHQVVVAQLAAGRQGTHATKTRGQVSGGGKKPYRQKGTGNAR 75
Query: 172 HGTLRGPQ 179
G++R PQ
Sbjct: 76 QGSIRAPQ 83
>gi|190571547|ref|YP_001975905.1| 50S ribosomal protein L4 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018949|ref|ZP_03334756.1| ribosomal protein L4 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|226731443|sp|B3CN27.1|RL4_WOLPP RecName: Full=50S ribosomal protein L4
gi|190357819|emb|CAQ55275.1| ribosomal protein L4 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995058|gb|EEB55699.1| ribosomal protein L4 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 204
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ + N + G + L +F + I+H +VRWQLAKR+ G H TK IS+VSGT KP+
Sbjct: 5 LVDLSNNNVGSVELNPLIFSAKQKLSILHDIVRWQLAKRRVGAHKTKGISDVSGTTAKPY 64
Query: 163 RQKGTGRARHGTLRGPQ 179
QK TGRAR G+LR PQ
Sbjct: 65 GQKRTGRARQGSLRSPQ 81
>gi|325663061|ref|ZP_08151511.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 4_1_37FAA]
gi|331086668|ref|ZP_08335745.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 9_1_43BFAA]
gi|325470515|gb|EGC73745.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 4_1_37FAA]
gi|330409834|gb|EGG89269.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 206
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L+ VF V + + ++H V QLA ++QGT KT SEV G G+K
Sbjct: 4 VSVYNIEGKEVGTIDLSDAVFGVEVNEHLLHMAVVSQLANKRQGTQKAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRAPQ 82
>gi|310288023|ref|YP_003939282.1| 50S ribosomal protein L4 [Bifidobacterium bifidum S17]
gi|311064896|ref|YP_003971622.1| 50S ribosomal protein L4 [Bifidobacterium bifidum PRL2010]
gi|390937450|ref|YP_006395009.1| 50S ribosomal protein L4 [Bifidobacterium bifidum BGN4]
gi|421733519|ref|ZP_16172623.1| 50S ribosomal protein L4 [Bifidobacterium bifidum LMG 13195]
gi|421736119|ref|ZP_16174966.1| 50S ribosomal protein L4 [Bifidobacterium bifidum IPLA 20015]
gi|309251960|gb|ADO53708.1| 50S ribosomal protein L4 [Bifidobacterium bifidum S17]
gi|310867216|gb|ADP36585.1| RplD 50S ribosomal protein L4 [Bifidobacterium bifidum PRL2010]
gi|389891063|gb|AFL05130.1| 50S ribosomal protein L4 [Bifidobacterium bifidum BGN4]
gi|407078555|gb|EKE51357.1| 50S ribosomal protein L4 [Bifidobacterium bifidum LMG 13195]
gi|407296583|gb|EKF16118.1| 50S ribosomal protein L4 [Bifidobacterium bifidum IPLA 20015]
Length = 221
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Query: 129 IIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQGWYY 183
+IH+VV QLA +QGTH+TKT VSG GKKPW+QKGTGRAR G++R PQ WY+
Sbjct: 39 LIHQVVVAQLAAARQGTHATKTRGMVSGGGKKPWKQKGTGRARQGSIRAPQ-WYH 92
>gi|257067059|ref|YP_003153315.1| 50S ribosomal protein L4 [Anaerococcus prevotii DSM 20548]
gi|256798939|gb|ACV29594.1| ribosomal protein L4/L1e [Anaerococcus prevotii DSM 20548]
Length = 207
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E+ G + L +F+ I + ++ VV+ QLA ++QGT S KT SEV G G+K
Sbjct: 4 VDILNIKGENVGSLELNETLFNTEISEHSVYEVVKNQLANKRQGTQSAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G++R P
Sbjct: 64 PFRQKGTGRARQGSIRAPH 82
>gi|27353674|dbj|BAC50664.1| 50S ribosomal protein L4 [Bradyrhizobium japonicum USDA 110]
Length = 220
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 97 QDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSG 156
+++ + VT ++ G + L+ +F + R+DII R V+WQL KRQ GTH K +E+
Sbjct: 13 REMELKVTTLEGKEAGSVQLSDAIFGLEPRQDIIARCVQWQLNKRQAGTHKAKGRAEIWR 72
Query: 157 TGKKPWRQKGTGRARHGTLRGPQ 179
TGKK ++QKGTG ARHG+ R PQ
Sbjct: 73 TGKKMYKQKGTGGARHGSARVPQ 95
>gi|148693201|gb|EDL25148.1| mitochondrial ribosomal protein L4, isoform CRA_b [Mus musculus]
Length = 194
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 64 TTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDV 123
I P S G D +L+K L + Q V + F E G L DVF
Sbjct: 27 AEISEPRDSAGLL--DPVLRKCELRIPVHRRPVQAWVESLRGFEQERIGLAELHPDVFAT 84
Query: 124 PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGP---QG 180
R DI+H+V WQ R+ +TKT +EVSG G+KPW+QKG+GRARHG++R P G
Sbjct: 85 APRLDIVHQVAIWQRNFRRISYANTKTRAEVSGGGRKPWQQKGSGRARHGSIRSPLWRGG 144
Query: 181 WYYNARSKAQKPCY 194
+ + PC+
Sbjct: 145 EWATEERVSDDPCH 158
>gi|441516755|ref|ZP_20998500.1| 50S ribosomal protein L4 [Gordonia hirsuta DSM 44140 = NBRC 16056]
gi|441456376|dbj|GAC56461.1| 50S ribosomal protein L4 [Gordonia hirsuta DSM 44140 = NBRC 16056]
Length = 219
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 48/69 (69%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
+G + L D+FDV ++H+VV Q A +QGTHSTKT EV G G KP+RQKGTGRA
Sbjct: 21 EGTVQLPADLFDVTANIALMHQVVVAQQAAGRQGTHSTKTRGEVRGGGVKPYRQKGTGRA 80
Query: 171 RHGTLRGPQ 179
R G++R PQ
Sbjct: 81 RQGSIRSPQ 89
>gi|15612698|ref|NP_241001.1| 50S ribosomal protein L4 [Bacillus halodurans C-125]
gi|7674304|sp|Q9Z9L3.1|RL4_BACHD RecName: Full=50S ribosomal protein L4
gi|4512405|dbj|BAA75272.1| rplD [Bacillus halodurans]
gi|10172747|dbj|BAB03854.1| 50S ribosomal protein L4 [Bacillus halodurans C-125]
Length = 207
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N+ G + L+ VF + ++++H V Q A +QGTH TKT SEV G
Sbjct: 1 MPKVALYNQAGSQVGDIELSDAVFGIEPNENVLHDAVVMQQASLRQGTHKTKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQ 82
>gi|302388087|ref|YP_003823909.1| 50S ribosomal protein L4 [Clostridium saccharolyticum WM1]
gi|302198715|gb|ADL06286.1| ribosomal protein L4/L1e [Clostridium saccharolyticum WM1]
Length = 206
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA ++QGT KT +EVSG G+K
Sbjct: 4 VSVYNMEGKEVGTLELNDAVFGVDVNEHLVHMAVVSQLANKRQGTQKAKTRAEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PW+QKGTG AR G+ R PQ
Sbjct: 64 PWKQKGTGHARQGSTRSPQ 82
>gi|119025340|ref|YP_909185.1| 50S ribosomal protein L4 [Bifidobacterium adolescentis ATCC 15703]
gi|154486748|ref|ZP_02028155.1| hypothetical protein BIFADO_00573 [Bifidobacterium adolescentis
L2-32]
gi|166234637|sp|A1A070.1|RL4_BIFAA RecName: Full=50S ribosomal protein L4
gi|118764924|dbj|BAF39103.1| 50S ribosomal protein L4 [Bifidobacterium adolescentis ATCC 15703]
gi|154084611|gb|EDN83656.1| 50S ribosomal protein L4 [Bifidobacterium adolescentis L2-32]
Length = 221
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 122 DVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQGW 181
+V R +IH+VV QLA +QGTH+TKT VSG G+KPW+QKGTGRAR G++R PQ W
Sbjct: 32 EVQSRIPLIHQVVIAQLAAARQGTHATKTRGMVSGGGRKPWKQKGTGRARQGSIRAPQ-W 90
Query: 182 YY 183
Y+
Sbjct: 91 YH 92
>gi|386383965|ref|ZP_10069388.1| 50S ribosomal protein L4 [Streptomyces tsukubaensis NRRL18488]
gi|385668575|gb|EIF91895.1| 50S ribosomal protein L4 [Streptomyces tsukubaensis NRRL18488]
Length = 217
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + + G + L ++FD + +IH+VV QLA +QGTH KT EV G GKK
Sbjct: 4 IDILSPAGDKTGTVELPAEIFDAKVSIPLIHQVVVAQLAAARQGTHKVKTRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G+ R PQ
Sbjct: 64 PYRQKGTGRARQGSTRAPQ 82
>gi|317153957|ref|YP_004122005.1| 50S ribosomal protein L4 [Desulfovibrio aespoeensis Aspo-2]
gi|316944208|gb|ADU63259.1| ribosomal protein L4/L1e [Desulfovibrio aespoeensis Aspo-2]
Length = 206
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + N+ G + LA +VF+V I+ +I++ VVR Q A ++ GTH+TKT SG G+K
Sbjct: 4 LQVVDQNNQKVGDIELAPEVFEVEIQPEILNLVVRAQRAAKRSGTHATKTRGMKSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRAR G+ R P
Sbjct: 64 PWRQKGTGRARAGSSRSP 81
>gi|410929341|ref|XP_003978058.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like [Takifugu
rubripes]
Length = 302
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 70/143 (48%), Gaps = 28/143 (19%)
Query: 60 RKFSTTILTPDSSEGAFPSDLLLKKTVLTP--------------------DITIGLH--- 96
++F++T+ + E A P++LLL ++ P D I H
Sbjct: 15 QRFASTL----AGESALPTNLLLPTNLVDPARLKRPSPPADCPLPVLRKCDAAIPAHLSH 70
Query: 97 -QDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVS 155
Q V + +E G L DVF VP R DI+H V WQ ++ TK SEV
Sbjct: 71 IQTWVETLEKEDSEPLGLAHLHPDVFAVPPRLDILHMVEIWQRNFKRISHAHTKVRSEVR 130
Query: 156 GTGKKPWRQKGTGRARHGTLRGP 178
G GKKPWRQKG+GRARHG++R P
Sbjct: 131 GGGKKPWRQKGSGRARHGSIRSP 153
>gi|254391392|ref|ZP_05006595.1| 50S ribosomal protein L4 [Streptomyces clavuligerus ATCC 27064]
gi|197705082|gb|EDY50894.1| 50S ribosomal protein L4 [Streptomyces clavuligerus ATCC 27064]
Length = 219
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 46/68 (67%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD + +IH+VV QLA +QGTH KT EV G GKKP+RQKGTGRAR
Sbjct: 18 GTVELPAEIFDAKVSVPLIHQVVVAQLAAARQGTHKVKTRGEVRGGGKKPYRQKGTGRAR 77
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 78 QGSTRAPQ 85
>gi|148256391|ref|YP_001240976.1| 50S ribosomal protein L4 [Bradyrhizobium sp. BTAi1]
gi|166234638|sp|A5ELM6.1|RL4_BRASB RecName: Full=50S ribosomal protein L4
gi|146408564|gb|ABQ37070.1| LSU ribosomal protein L4P [Bradyrhizobium sp. BTAi1]
Length = 206
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT +D G + L+ +F + R DII R V+WQL KRQ GTH K +E+ TG
Sbjct: 1 MELKVTTLEGKDAGSVQLSDAIFGLEPRVDIIQRCVQWQLNKRQAGTHKAKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KK ++QKGTG ARHG+ R PQ
Sbjct: 61 KKMYKQKGTGGARHGSARVPQ 81
>gi|297192702|ref|ZP_06910100.1| 50S ribosomal protein L4 [Streptomyces pristinaespiralis ATCC
25486]
gi|197721643|gb|EDY65551.1| 50S ribosomal protein L4 [Streptomyces pristinaespiralis ATCC
25486]
Length = 219
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + + G + L ++FD + +IH+VV QLA +QGTH KT EV G GKK
Sbjct: 7 IDILSPAGDKSGTVELPAEIFDAKVSIPLIHQVVVAQLAAARQGTHKVKTRGEVRGGGKK 66
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G+ R PQ
Sbjct: 67 PYRQKGTGRARQGSTRAPQ 85
>gi|269215704|ref|ZP_06159558.1| ribosomal protein L4/L1 family protein [Slackia exigua ATCC 700122]
gi|269131191|gb|EEZ62266.1| ribosomal protein L4/L1 family protein [Slackia exigua ATCC 700122]
Length = 207
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 45/64 (70%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L VF + ++H+VVR Q A +QGTHSTKT +VSG G+KPWRQKGTGRAR GT+
Sbjct: 19 LNAAVFGIEPNVPVMHQVVRSQQAALRQGTHSTKTRGQVSGGGRKPWRQKGTGRARQGTI 78
Query: 176 RGPQ 179
R P
Sbjct: 79 RAPH 82
>gi|269955436|ref|YP_003325225.1| 50S ribosomal protein L4/L1e [Xylanimonas cellulosilytica DSM
15894]
gi|269304117|gb|ACZ29667.1| ribosomal protein L4/L1e [Xylanimonas cellulosilytica DSM 15894]
Length = 232
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V + + G L +VFDV +IH+VV Q A +QGTH+TKT EV G G
Sbjct: 4 LTVDVLDAQGKKAGQAELPAEVFDVVTNVPLIHQVVVAQRAAARQGTHATKTRGEVRGGG 63
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
+KP++QKGTGRAR G+ R PQ
Sbjct: 64 RKPYKQKGTGRARQGSTRAPQ 84
>gi|297564038|ref|YP_003683011.1| 50S ribosomal protein L4 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848487|gb|ADH70505.1| ribosomal protein L4/L1e [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 223
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N KG + L VF + +IH+VV QLA +QGTH+TKT +V G GKK
Sbjct: 4 IEVKNPEGGTKGSVELPDTVFAQQVSIPLIHQVVNAQLAAGRQGTHATKTRGDVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G++R PQ
Sbjct: 64 PYRQKGTGRARQGSIRAPQ 82
>gi|405980231|ref|ZP_11038571.1| 50S ribosomal protein L4 [Actinomyces turicensis ACS-279-V-Col4]
gi|404390683|gb|EJZ85750.1| 50S ribosomal protein L4 [Actinomyces turicensis ACS-279-V-Col4]
Length = 214
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 46/64 (71%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FDVP ++H+VV QLA +QGTH+TKT VSG GKKP+RQKGTG AR G++
Sbjct: 22 LPAEIFDVPTNIPLMHQVVVAQLAAARQGTHATKTRGMVSGGGKKPFRQKGTGNARQGSI 81
Query: 176 RGPQ 179
R P
Sbjct: 82 RAPH 85
>gi|188584837|ref|YP_001916382.1| 50S ribosomal protein L4 [Natranaerobius thermophilus JW/NM-WN-LF]
gi|226730697|sp|B2A4E0.1|RL4_NATTJ RecName: Full=50S ribosomal protein L4
gi|179349524|gb|ACB83794.1| LSU ribosomal protein L4P [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 207
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N + G + L +F I + ++H V LA +++GT S KT SEV G
Sbjct: 1 MPKVALYNNEGSQVGEITLDDSIFATDINETLMHEAVNMHLASKRRGTASAKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
G+KPWRQKGTGRARHG++R P W S A KP
Sbjct: 61 GRKPWRQKGTGRARHGSIRSPI-WVGGGISFAPKP 94
>gi|294814468|ref|ZP_06773111.1| 50S ribosomal protein L4 [Streptomyces clavuligerus ATCC 27064]
gi|326442857|ref|ZP_08217591.1| 50S ribosomal protein L4 [Streptomyces clavuligerus ATCC 27064]
gi|294327067|gb|EFG08710.1| 50S ribosomal protein L4 [Streptomyces clavuligerus ATCC 27064]
Length = 216
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 46/68 (67%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD + +IH+VV QLA +QGTH KT EV G GKKP+RQKGTGRAR
Sbjct: 15 GTVELPAEIFDAKVSVPLIHQVVVAQLAAARQGTHKVKTRGEVRGGGKKPYRQKGTGRAR 74
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 75 QGSTRAPQ 82
>gi|395787644|ref|ZP_10467236.1| 50S ribosomal protein L4 [Bartonella birtlesii LL-WM9]
gi|395410266|gb|EJF76821.1| 50S ribosomal protein L4 [Bartonella birtlesii LL-WM9]
Length = 206
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 5/103 (4%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + + G + ++ +F + R+DI+ RV+RWQLA+RQQGTH ++ S+VS T
Sbjct: 2 DLVIKTLD--GGEAGKLKVSKAIFGLVPREDILQRVIRWQLARRQQGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYKVEQEG 200
G K ++QKGTGRARH + R Q + KA P + G
Sbjct: 60 GAKMFKQKGTGRARHSSARVSQ---FRGGGKAHGPVARGHAHG 99
>gi|440696591|ref|ZP_20879046.1| ribosomal protein L4/L1 family protein [Streptomyces turgidiscabies
Car8]
gi|440281099|gb|ELP68760.1| ribosomal protein L4/L1 family protein [Streptomyces turgidiscabies
Car8]
Length = 218
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 109 EDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGT 167
E G + L ++FDV I ++H+VV QLA +QGTH TKT +EV G G+KP+RQKGT
Sbjct: 12 EKAGSVELPAEIFDVEKISIPLLHQVVVAQLAAARQGTHKTKTRAEVRGGGRKPYRQKGT 71
Query: 168 GRARHGTLRGPQ 179
GRAR G+ R PQ
Sbjct: 72 GRARQGSTRAPQ 83
>gi|339442853|ref|YP_004708858.1| 50S ribosomal protein L4 [Clostridium sp. SY8519]
gi|338902254|dbj|BAK47756.1| ribosomal protein L4 [Clostridium sp. SY8519]
Length = 206
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 48/79 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E+ G + L VF V + ++H V QLA ++QGT KT SEV G G+K
Sbjct: 4 VSVYNMAGEEVGTLDLNDAVFGVEPNEHLVHAAVTAQLANKRQGTQKAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|308178135|ref|YP_003917541.1| 50S ribosomal protein L4 [Arthrobacter arilaitensis Re117]
gi|307745598|emb|CBT76570.1| 50S ribosomal protein L4 [Arthrobacter arilaitensis Re117]
Length = 200
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FDV ++H+VV QLA +QGTH TK SEVSG G+KP++QKGTGRAR G++
Sbjct: 9 LPAEIFDVQTNVPLLHQVVVAQLAAARQGTHKTKDRSEVSGAGRKPFKQKGTGRARQGSI 68
Query: 176 RGPQ 179
R P
Sbjct: 69 RAPH 72
>gi|284034001|ref|YP_003383932.1| 50S ribosomal protein L4/L1e [Kribbella flavida DSM 17836]
gi|283813294|gb|ADB35133.1| ribosomal protein L4/L1e [Kribbella flavida DSM 17836]
Length = 237
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 46/68 (67%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G L ++FDV + +IH+VV QLA +QGTH K+ EVSG G KP+RQKGTGRAR
Sbjct: 18 GSAELPAELFDVQVNIPLIHQVVVAQLAAARQGTHKVKSRGEVSGGGAKPYRQKGTGRAR 77
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 78 QGSTRAPQ 85
>gi|86749416|ref|YP_485912.1| 50S ribosomal protein L4 [Rhodopseudomonas palustris HaA2]
gi|109893629|sp|Q2IXQ9.1|RL4_RHOP2 RecName: Full=50S ribosomal protein L4
gi|86572444|gb|ABD07001.1| LSU ribosomal protein L4P [Rhodopseudomonas palustris HaA2]
Length = 206
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ VT ++ G + L+ +F + R DI+ R V WQLAKRQ GTH K +EV TGKK
Sbjct: 3 LKVTTLEGQEAGSVQLSDAIFGLEPRNDIVQRCVIWQLAKRQAGTHKAKGRAEVWRTGKK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
++QKGTG ARHG+ R PQ
Sbjct: 63 MYKQKGTGGARHGSQRVPQ 81
>gi|304321441|ref|YP_003855084.1| 50S ribosomal protein L4 [Parvularcula bermudensis HTCC2503]
gi|303300343|gb|ADM09942.1| 50S ribosomal protein L4 [Parvularcula bermudensis HTCC2503]
Length = 220
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 48/81 (59%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I V G + L D+F + R DI+HR V WQ AKRQQGTH K EV+GT
Sbjct: 1 MQIDVLTLDASKAGDLDLRDDIFGLEPRADILHRYVVWQQAKRQQGTHKAKERGEVTGTT 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KK RQKG+G ARHG + PQ
Sbjct: 61 KKFVRQKGSGGARHGNRKAPQ 81
>gi|395238078|ref|ZP_10416057.1| 50S ribosomal protein L4 [Turicella otitidis ATCC 51513]
gi|423351629|ref|ZP_17329260.1| 50S ribosomal protein L4 [Turicella otitidis ATCC 51513]
gi|237510710|gb|ACQ99342.1| ribosomal protein L4 [Turicella otitidis]
gi|394486514|emb|CCI84145.1| 50S ribosomal protein L4 [Turicella otitidis ATCC 51513]
gi|404386349|gb|EJZ81512.1| 50S ribosomal protein L4 [Turicella otitidis ATCC 51513]
Length = 217
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 48/68 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++F+ ++ H+VV QLA +QGTHSTKT EV G GKKP+RQKGTGRAR
Sbjct: 17 GQVELPSEIFEREASIELTHQVVVAQLAAARQGTHSTKTRGEVRGGGKKPYRQKGTGRAR 76
Query: 172 HGTLRGPQ 179
G++R PQ
Sbjct: 77 QGSIRAPQ 84
>gi|227497182|ref|ZP_03927430.1| ribosomal protein L4 [Actinomyces urogenitalis DSM 15434]
gi|226833313|gb|EEH65696.1| ribosomal protein L4 [Actinomyces urogenitalis DSM 15434]
Length = 214
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + + + + G L ++FDV ++H+VV QLA +QGTH+TKT V G G
Sbjct: 5 LTVDIVDSKGKKTGSAELPAEIFDVETNIPLMHQVVVAQLAAARQGTHATKTRGAVRGGG 64
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
+KP+RQKGTGRAR G+ R PQ
Sbjct: 65 RKPYRQKGTGRARQGSTRAPQ 85
>gi|166031658|ref|ZP_02234487.1| hypothetical protein DORFOR_01358 [Dorea formicigenerans ATCC
27755]
gi|346307825|ref|ZP_08849955.1| 50S ribosomal protein L4 [Dorea formicigenerans 4_6_53AFAA]
gi|166028635|gb|EDR47392.1| 50S ribosomal protein L4 [Dorea formicigenerans ATCC 27755]
gi|345904783|gb|EGX74527.1| 50S ribosomal protein L4 [Dorea formicigenerans 4_6_53AFAA]
Length = 206
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 49/79 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ + L+ VF V + + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVETIELSDAVFGVEVNEHLVHMAVVNQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRAPQ 82
>gi|402497078|ref|YP_006556338.1| 50S ribosomal protein L4 [Wolbachia endosymbiont of Onchocerca
ochengi]
gi|398650351|emb|CCF78521.1| 50S ribosomal protein L4 [Wolbachia endosymbiont of Onchocerca
ochengi]
Length = 204
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 48/70 (68%)
Query: 110 DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGR 169
D G + L +F V + I+H +V WQLAKR+ GTH T+ IS++SGT KP+ QK TGR
Sbjct: 12 DVGVVQLNPLIFFVKQKLSILHDIVTWQLAKRRAGTHKTRGISDISGTTAKPYSQKRTGR 71
Query: 170 ARHGTLRGPQ 179
AR G+LR PQ
Sbjct: 72 ARQGSLRSPQ 81
>gi|325179760|emb|CCA14163.1| 50S ribosomal protein L4 putative [Albugo laibachii Nc14]
Length = 279
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
Query: 102 PVTNF--FNEDKGFMVLAGD--VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
P+ N F ++ LA D VF+VP+RKDI+HRVVRWQLA R+ G H K+ SE G+
Sbjct: 71 PIINTLAFKDESVVNTLALDPSVFNVPLRKDILHRVVRWQLACRRSGNHKAKSRSETRGS 130
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
+K QKG+G+AR G +R PQ
Sbjct: 131 TRKVRPQKGSGQARVGDVRAPQ 152
>gi|184200263|ref|YP_001854470.1| 50S ribosomal protein L4 [Kocuria rhizophila DC2201]
gi|183580493|dbj|BAG28964.1| 50S ribosomal protein L4 [Kocuria rhizophila DC2201]
Length = 206
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FD ++H+VV QLA +QGTH TKT +EVSG G+KP++QKGTGRAR G++
Sbjct: 10 LPAEIFDAQTNVALLHQVVVAQLAAARQGTHKTKTRAEVSGAGRKPFKQKGTGRARQGSI 69
Query: 176 RGPQ 179
R P
Sbjct: 70 RAPH 73
>gi|260681847|ref|YP_003213132.1| 50S ribosomal protein L4 [Clostridium difficile CD196]
gi|260685445|ref|YP_003216578.1| 50S ribosomal protein L4 [Clostridium difficile R20291]
gi|423081657|ref|ZP_17070259.1| 50S ribosomal protein L4 [Clostridium difficile 002-P50-2011]
gi|423085189|ref|ZP_17073644.1| 50S ribosomal protein L4 [Clostridium difficile 050-P50-2011]
gi|423089504|ref|ZP_17077862.1| 50S ribosomal protein L4 [Clostridium difficile 70-100-2010]
gi|260208010|emb|CBA60188.1| 50S ribosomal protein L4 [Clostridium difficile CD196]
gi|260211461|emb|CBE01581.1| 50S ribosomal protein L4 [Clostridium difficile R20291]
gi|357550235|gb|EHJ32060.1| 50S ribosomal protein L4 [Clostridium difficile 002-P50-2011]
gi|357550521|gb|EHJ32335.1| 50S ribosomal protein L4 [Clostridium difficile 050-P50-2011]
gi|357558114|gb|EHJ39621.1| 50S ribosomal protein L4 [Clostridium difficile 70-100-2010]
Length = 217
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Query: 99 LVIPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVS 155
+ +P N N ++ G + L+ +F V + +++ VV+ QLA ++QGT S KT +EV
Sbjct: 9 ITMPKLNVLNVSGQNVGEIELSDSIFGVEVNGHVLYEVVKNQLANKRQGTQSAKTRAEVR 68
Query: 156 GTGKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP-CYK 195
G G+KPW+QKGTGRAR G+ R Q W + A KP YK
Sbjct: 69 GGGRKPWKQKGTGRARQGSTRSVQ-WVGGGVAFAPKPRSYK 108
>gi|197294630|ref|YP_001799171.1| 50S ribosomal protein L4 [Candidatus Phytoplasma australiense]
gi|226730703|sp|B1VAE7.1|RL4_PHYAS RecName: Full=50S ribosomal protein L4
gi|171853957|emb|CAM11920.1| 50S ribosomal protein L4 [Candidatus Phytoplasma australiense]
Length = 207
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L +VFD+ + ++ V+ Q A +QGTH+TKT + VSG GKKPWRQKGTGRARHG++
Sbjct: 19 LKSNVFDIQPHQQALYDVINAQRAAMRQGTHATKTRAFVSGGGKKPWRQKGTGRARHGSI 78
Query: 176 RGP 178
R P
Sbjct: 79 RSP 81
>gi|296449798|ref|ZP_06891567.1| ribosomal protein L4/L1 family protein [Clostridium difficile
NAP08]
gi|296877862|ref|ZP_06901884.1| ribosomal protein L4/L1 family protein [Clostridium difficile
NAP07]
gi|296261396|gb|EFH08222.1| ribosomal protein L4/L1 family protein [Clostridium difficile
NAP08]
gi|296431162|gb|EFH16987.1| ribosomal protein L4/L1 family protein [Clostridium difficile
NAP07]
Length = 217
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Query: 99 LVIPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVS 155
+ +P N N ++ G + L+ +F V + +++ VV+ QLA ++QGT S KT +EV
Sbjct: 9 ITMPKLNVLNVSGQNVGEIELSDSIFGVEVNGHVLYEVVKNQLANKRQGTQSAKTRAEVR 68
Query: 156 GTGKKPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP-CYK 195
G G+KPW+QKGTGRAR G+ R Q W + A KP YK
Sbjct: 69 GGGRKPWKQKGTGRARQGSTRSVQ-WVGGGVAFAPKPRSYK 108
>gi|357590058|ref|ZP_09128724.1| 50S ribosomal protein L4 [Corynebacterium nuruki S6-4]
Length = 217
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 51/82 (62%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V G + L +FDV ++H+VV QLA ++QGTH+TKT VSG
Sbjct: 3 NLTLNVNTADGSTNGTVELPASIFDVEPSVALMHQVVVAQLAAKRQGTHATKTRGMVSGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
GKKP+RQKGTGRAR G+ R P
Sbjct: 63 GKKPFRQKGTGRARQGSTRAPH 84
>gi|373469454|ref|ZP_09560640.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium oral taxon 082
str. F0431]
gi|371764414|gb|EHO52825.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium oral taxon 082
str. F0431]
Length = 129
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 ISVFNIEGKEVGSIELNDAVFGVNVNEHLVHMAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PW+QKGTG AR G+ R PQ
Sbjct: 64 PWKQKGTGHARQGSTRSPQ 82
>gi|340359378|ref|ZP_08681864.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 448 str.
F0400]
gi|339884699|gb|EGQ74467.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 448 str.
F0400]
Length = 214
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + + + E G L ++FDV ++H+VV QLA +QGTH+T+T V G G
Sbjct: 5 LSVAIVDSKGERTGTAELPAEIFDVEPNIPLMHQVVVAQLAAARQGTHATRTRGMVRGGG 64
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
+KP+RQKGTGRAR G++R PQ
Sbjct: 65 RKPYRQKGTGRARQGSIRAPQ 85
>gi|148273800|ref|YP_001223361.1| 50S ribosomal protein L4 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831730|emb|CAN02699.1| 50S ribosomal protein L4 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 218
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 47/68 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L +FDV +IH+VV QLA +QGTH TK EVSG G+KP++QKGTGRAR
Sbjct: 18 GSVDLPASLFDVQTNVPLIHQVVVAQLAAARQGTHKTKGRGEVSGAGRKPFKQKGTGRAR 77
Query: 172 HGTLRGPQ 179
G++R PQ
Sbjct: 78 QGSIRAPQ 85
>gi|386845735|ref|YP_006263748.1| 50S ribosomal protein L4 [Actinoplanes sp. SE50/110]
gi|359833239|gb|AEV81680.1| 50S ribosomal protein L4 [Actinoplanes sp. SE50/110]
Length = 215
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 49/79 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N G + L VFD ++H+VV QLA +QGTH KT EV+G GKK
Sbjct: 4 VDIINAEGAKAGSVDLPASVFDAQANIPLMHQVVVAQLAAARQGTHKAKTRGEVAGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P++QKGTGRAR G++R PQ
Sbjct: 64 PYKQKGTGRARQGSIRAPQ 82
>gi|296392586|ref|YP_003657470.1| 50S ribosomal protein L4 [Segniliparus rotundus DSM 44985]
gi|296179733|gb|ADG96639.1| ribosomal protein L4/L1e [Segniliparus rotundus DSM 44985]
Length = 218
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + + + G L ++FD P ++H+VV QLA +QGTH KT EVSG G
Sbjct: 3 LTVTIHAADGKSAGTFDLPAEIFDAPANISLLHQVVTAQLAAARQGTHKVKTRGEVSGGG 62
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
+KP++QKGTGRAR G+ R P
Sbjct: 63 RKPYKQKGTGRARQGSTRAPH 83
>gi|357411732|ref|YP_004923468.1| 50S ribosomal protein L4 [Streptomyces flavogriseus ATCC 33331]
gi|320009101|gb|ADW03951.1| ribosomal protein L4/L1e [Streptomyces flavogriseus ATCC 33331]
Length = 216
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + + G + L ++FD +IH+VV QLA +QGTH TKT EV G G+K
Sbjct: 4 IDILSPAGDKAGTVELPAEIFDAKTSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G+ R PQ
Sbjct: 64 PYRQKGTGRARQGSTRAPQ 82
>gi|363890335|ref|ZP_09317673.1| 50S ribosomal protein L4 [Eubacteriaceae bacterium CM5]
gi|361965779|gb|EHL18750.1| 50S ribosomal protein L4 [Eubacteriaceae bacterium CM5]
Length = 160
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 114 MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 173
M ++ D+F V I + ++ V+ LA R+QGT S KT +EV G G+KPWRQKGTGRAR G
Sbjct: 17 MEISEDIFAVEINEHCVYETVKNHLANRRQGTQSAKTRAEVRGGGRKPWRQKGTGRARQG 76
Query: 174 TLRGPQ 179
+ R PQ
Sbjct: 77 STRSPQ 82
>gi|299143193|ref|ZP_07036273.1| ribosomal protein L4/L1 family protein [Peptoniphilus sp. oral
taxon 386 str. F0131]
gi|298517678|gb|EFI41417.1| ribosomal protein L4/L1 family protein [Peptoniphilus sp. oral
taxon 386 str. F0131]
Length = 207
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N + L ++FD+ I + ++ VV+ LA R+QGT S KT +EV G G+K
Sbjct: 4 IQVVNMEGAAVSEIELNENIFDIDINEHAVYLVVKNILANRRQGTKSAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PW+QKGTGRAR G++R PQ
Sbjct: 64 PWKQKGTGRARQGSIRSPQ 82
>gi|398822815|ref|ZP_10581190.1| 50S ribosomal protein L4, bacterial/organelle [Bradyrhizobium sp.
YR681]
gi|398226521|gb|EJN12768.1| 50S ribosomal protein L4, bacterial/organelle [Bradyrhizobium sp.
YR681]
Length = 206
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT ++ G + L+ +F + R+DII R V+WQL KRQ GTH K +E+ TG
Sbjct: 1 MELKVTTLEGKEAGSVQLSDTIFGLEPRQDIIARCVQWQLNKRQAGTHKAKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KK ++QKGTG ARHG+ R PQ
Sbjct: 61 KKMYKQKGTGGARHGSARVPQ 81
>gi|385800568|ref|YP_005836972.1| 50S ribosomal protein L4 [Halanaerobium praevalens DSM 2228]
gi|309389932|gb|ADO77812.1| LSU ribosomal protein L4P [Halanaerobium praevalens DSM 2228]
Length = 209
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 45/63 (71%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L VF+ I K ++H+VV QLA R+ G STKT +V G G+KPWRQKGTGRARHG++
Sbjct: 19 LNESVFNDKINKHVVHQVVNAQLAARRGGNASTKTRGKVRGGGRKPWRQKGTGRARHGSI 78
Query: 176 RGP 178
R P
Sbjct: 79 RSP 81
>gi|91977651|ref|YP_570310.1| 50S ribosomal protein L4 [Rhodopseudomonas palustris BisB5]
gi|123762621|sp|Q134T0.1|RL4_RHOPS RecName: Full=50S ribosomal protein L4
gi|91684107|gb|ABE40409.1| LSU ribosomal protein L4P [Rhodopseudomonas palustris BisB5]
Length = 206
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ VT ++ G + L+ +F + R+DI+ R V WQLAKRQ GTH K +E+ TGKK
Sbjct: 3 LKVTTLEGKEAGSVQLSDAIFGLEPRQDIVQRCVIWQLAKRQAGTHKAKGRAEIWRTGKK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
++QKGTG ARHG+ R PQ
Sbjct: 63 MYKQKGTGGARHGSQRVPQ 81
>gi|295694838|ref|YP_003588076.1| 50S ribosomal protein L4 [Kyrpidia tusciae DSM 2912]
gi|295410440|gb|ADG04932.1| ribosomal protein L4/L1e [Kyrpidia tusciae DSM 2912]
Length = 207
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G + L+ VF V ++ ++H+ V QLA +QGT +TK + V G G+K
Sbjct: 4 VAVYNAAGEQVGELELSEKVFGVDVKPAVLHQAVVAQLANARQGTRATKNRALVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G++R PQ
Sbjct: 64 PWRQKGTGRARQGSIRAPQ 82
>gi|225629697|ref|ZP_03787669.1| ribosomal protein L4 [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225591450|gb|EEH12518.1| ribosomal protein L4 [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 201
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N N++ G L +F + I+H +VRWQLA R+ GTH TK IS+VSGT KP+
Sbjct: 5 LVNLSNDNVGTAQLNPLIFSAKQKLSILHDIVRWQLANRRAGTHKTKGISDVSGTTAKPY 64
Query: 163 RQKGTGRARHGTLRGPQ 179
QK T RAR G+LR PQ
Sbjct: 65 GQKRTARARPGSLRSPQ 81
>gi|347730657|ref|ZP_08863771.1| 50S ribosomal protein L4 [Desulfovibrio sp. A2]
gi|347520576|gb|EGY27707.1| 50S ribosomal protein L4 [Desulfovibrio sp. A2]
Length = 206
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+ V +++DK G + LA +VF+V ++ +I++ VVR A + GTH+TKT + VSG
Sbjct: 1 MAVVKVYDQDKKEAGELTLAPEVFEVEVKPEILNLVVRAHRAGLRSGTHATKTRAFVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGP 178
G KPWRQKGTGRAR G+ R P
Sbjct: 61 GAKPWRQKGTGRARSGSNRSP 81
>gi|269122980|ref|YP_003305557.1| 50S ribosomal protein L4 [Streptobacillus moniliformis DSM 12112]
gi|268314306|gb|ACZ00680.1| ribosomal protein L4/L1e [Streptobacillus moniliformis DSM 12112]
Length = 214
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
D + V N E+KG ++ ++F + K ++H V+ +LA + GT STKT EVSG
Sbjct: 3 DFNLKVYNLNGEEKGVTTVSSEIFGLEPNKYVMHEVLTAELAASRAGTASTKTRGEVSGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KP+RQKGTGRAR G+ R P
Sbjct: 63 GRKPFRQKGTGRARQGSTRAPH 84
>gi|383771136|ref|YP_005450201.1| 50S ribosomal protein L4 [Bradyrhizobium sp. S23321]
gi|381359259|dbj|BAL76089.1| 50S ribosomal protein L4 [Bradyrhizobium sp. S23321]
Length = 206
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT ++ G + L+ +F + R+DII R V+WQL KRQ GTH K +E+ TG
Sbjct: 1 MELKVTTLEGKEAGSVQLSDAIFGLEPRQDIIARCVQWQLNKRQAGTHKAKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KK ++QKGTG ARHG+ R PQ
Sbjct: 61 KKMYKQKGTGGARHGSARVPQ 81
>gi|374308550|ref|YP_005054981.1| 50S ribosomal protein L4/L1 [Filifactor alocis ATCC 35896]
gi|291166878|gb|EFE28924.1| 50S ribosomal protein L4/L1 [Filifactor alocis ATCC 35896]
Length = 207
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E M L+ ++F I + ++++VV+ LA ++ GT S KT +EV G G K
Sbjct: 4 VDVLNINGEKVSEMELSENLFGAEINEHVVYQVVKNHLANKRVGTQSAKTRAEVRGGGAK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G++R PQ
Sbjct: 64 PWRQKGTGRARQGSIRSPQ 82
>gi|254973732|ref|ZP_05270204.1| 50S ribosomal protein L4 [Clostridium difficile QCD-66c26]
gi|255091121|ref|ZP_05320599.1| 50S ribosomal protein L4 [Clostridium difficile CIP 107932]
gi|255099233|ref|ZP_05328210.1| 50S ribosomal protein L4 [Clostridium difficile QCD-63q42]
gi|255305016|ref|ZP_05349188.1| 50S ribosomal protein L4 [Clostridium difficile ATCC 43255]
gi|255312776|ref|ZP_05354359.1| 50S ribosomal protein L4 [Clostridium difficile QCD-76w55]
gi|255515535|ref|ZP_05383211.1| 50S ribosomal protein L4 [Clostridium difficile QCD-97b34]
gi|255648630|ref|ZP_05395532.1| 50S ribosomal protein L4 [Clostridium difficile QCD-37x79]
gi|306518753|ref|ZP_07405100.1| 50S ribosomal protein L4 [Clostridium difficile QCD-32g58]
gi|384359400|ref|YP_006197252.1| 50S ribosomal protein L4 [Clostridium difficile BI1]
gi|400927241|ref|YP_001086538.2| 50S ribosomal protein L4 [Clostridium difficile 630]
gi|328887509|emb|CAJ66889.2| 50S ribosomal protein L4 [Clostridium difficile 630]
Length = 207
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L+ +F V + +++ VV+ QLA ++QGT S KT +EV G G+K
Sbjct: 4 LNVLNVSGQNVGEIELSDSIFGVEVNGHVLYEVVKNQLANKRQGTQSAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP-CYK 195
PW+QKGTGRAR G+ R Q W + A KP YK
Sbjct: 64 PWKQKGTGRARQGSTRSVQ-WVGGGVAFAPKPRSYK 98
>gi|255654163|ref|ZP_05399572.1| 50S ribosomal protein L4 [Clostridium difficile QCD-23m63]
Length = 207
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L+ +F V + +++ VV+ QLA ++QGT S KT +EV G G+K
Sbjct: 4 LNVLNVSGQNVGEIELSDSIFGVEVNGHVLYEVVKNQLANKRQGTQSAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP-CYK 195
PW+QKGTGRAR G+ R Q W + A KP YK
Sbjct: 64 PWKQKGTGRARQGSTRSVQ-WVGGGVAFAPKPRSYK 98
>gi|85715130|ref|ZP_01046114.1| 50S ribosomal protein L4 [Nitrobacter sp. Nb-311A]
gi|85698045|gb|EAQ35918.1| 50S ribosomal protein L4 [Nitrobacter sp. Nb-311A]
Length = 206
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + +T + G + L+ +F + RKD+I R V WQLAKRQ GT TK +E+ TG
Sbjct: 1 MELNITTLEGKAAGSVQLSDGIFGLEPRKDLIQRCVNWQLAKRQAGTRKTKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KK ++QKGTG ARHG+ R PQ
Sbjct: 61 KKLFKQKGTGNARHGSARAPQ 81
>gi|161511095|ref|NP_772039.2| 50S ribosomal protein L4 [Bradyrhizobium japonicum USDA 110]
gi|384218079|ref|YP_005609245.1| 50S ribosomal protein L4 [Bradyrhizobium japonicum USDA 6]
gi|46577249|sp|Q89J85.2|RL4_BRAJA RecName: Full=50S ribosomal protein L4
gi|354956978|dbj|BAL09657.1| 50S ribosomal protein L4 [Bradyrhizobium japonicum USDA 6]
Length = 206
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT ++ G + L+ +F + R+DII R V+WQL KRQ GTH K +E+ TG
Sbjct: 1 MELKVTTLEGKEAGSVQLSDAIFGLEPRQDIIARCVQWQLNKRQAGTHKAKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KK ++QKGTG ARHG+ R PQ
Sbjct: 61 KKMYKQKGTGGARHGSARVPQ 81
>gi|363891264|ref|ZP_09318443.1| 50S ribosomal protein L4 [Eubacteriaceae bacterium CM2]
gi|402837871|ref|ZP_10886386.1| 50S ribosomal protein L4 [Eubacteriaceae bacterium OBRC8]
gi|361965321|gb|EHL18303.1| 50S ribosomal protein L4 [Eubacteriaceae bacterium CM2]
gi|402274302|gb|EJU23486.1| 50S ribosomal protein L4 [Eubacteriaceae bacterium OBRC8]
Length = 208
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Query: 114 MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 173
M ++ D+F V + + ++ V+ LA R+QGT S KT +EV G G+KPWRQKGTGRAR G
Sbjct: 17 MEISEDIFAVEVNEHCVYEAVKNHLANRRQGTQSAKTRAEVRGGGRKPWRQKGTGRARQG 76
Query: 174 TLRGPQGWYYNARSKAQKP---CYKVEQE 199
+ R PQ W A KP YK+ ++
Sbjct: 77 STRSPQ-WIGGGVVFAPKPRDYSYKINKK 104
>gi|323703547|ref|ZP_08115193.1| ribosomal protein L4/L1e [Desulfotomaculum nigrificans DSM 574]
gi|333922449|ref|YP_004496029.1| 50S ribosomal protein L4 [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|323531538|gb|EGB21431.1| ribosomal protein L4/L1e [Desulfotomaculum nigrificans DSM 574]
gi|333748010|gb|AEF93117.1| ribosomal protein L4/L1e [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 206
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E G + L +VF + + ++H VV LA ++QGTH TKT +EV G G+K
Sbjct: 4 VALYNISGEQIGEVELKDEVFGIEPNEAVMHDVVVMHLANQRQGTHDTKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRAR G+ R P
Sbjct: 64 PWRQKGTGRARAGSSRSP 81
>gi|266620262|ref|ZP_06113197.1| ribosomal protein L4/L1 family protein [Clostridium hathewayi DSM
13479]
gi|288868165|gb|EFD00464.1| ribosomal protein L4/L1 family protein [Clostridium hathewayi DSM
13479]
Length = 206
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + L VF V + + ++H V QLA ++QGT KT +EVSG G+K
Sbjct: 4 VSVYNMEGNEVGTLELNDAVFGVNVNEHLVHLAVVSQLANKRQGTQKAKTRAEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PW+QKGTG AR G+ R PQ
Sbjct: 64 PWKQKGTGHARQGSTRSPQ 82
>gi|146181037|ref|XP_001022027.2| ribosomal protein L4/L1 family protein [Tetrahymena thermophila]
gi|146144303|gb|EAS01782.2| ribosomal protein L4/L1 family protein [Tetrahymena thermophila
SB210]
Length = 358
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Query: 97 QDLVIPVTNFFNED----KGFMV-LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTI 151
Q L +PV F E+ G V L D+F+VP+R+DI+H V W+ + + TH TKT
Sbjct: 69 QPLRVPVLKFLAENGQAYTGKTVDLDHDIFNVPLRRDIVHSYVLWRQNRDEIKTHITKTK 128
Query: 152 SEVSGTGKKPWRQKGTGRARHGTLRGP 178
VSG+GKKP+ QKGTG+AR G R P
Sbjct: 129 GTVSGSGKKPYAQKGTGKARMGNKRAP 155
>gi|363893533|ref|ZP_09320631.1| 50S ribosomal protein L4/L1 [Eubacteriaceae bacterium ACC19a]
gi|361963837|gb|EHL16903.1| 50S ribosomal protein L4/L1 [Eubacteriaceae bacterium ACC19a]
Length = 208
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Query: 114 MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 173
M ++ ++F V I + ++ V+ LA R+QGT S KT +EV G GKKPWRQKGTGRAR G
Sbjct: 17 MEISEEIFAVEINEHCVYETVKNHLANRRQGTQSAKTRAEVRGGGKKPWRQKGTGRARQG 76
Query: 174 TLRGPQGWYYNARSKAQKP---CYKVEQE 199
+ R PQ W A KP YK+ ++
Sbjct: 77 STRSPQ-WIGGGVVFAPKPRDYSYKINKK 104
>gi|374576228|ref|ZP_09649324.1| 50S ribosomal protein L4, bacterial/organelle [Bradyrhizobium sp.
WSM471]
gi|386402176|ref|ZP_10086954.1| 50S ribosomal protein L4, bacterial/organelle [Bradyrhizobium sp.
WSM1253]
gi|374424549|gb|EHR04082.1| 50S ribosomal protein L4, bacterial/organelle [Bradyrhizobium sp.
WSM471]
gi|385742802|gb|EIG62998.1| 50S ribosomal protein L4, bacterial/organelle [Bradyrhizobium sp.
WSM1253]
Length = 206
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT ++ G + L+ +F + R+DII R V+WQL KRQ GTH K +E+ TG
Sbjct: 1 MELKVTTLEGKEAGSVQLSDTIFGLEPRQDIIARCVQWQLNKRQAGTHKAKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KK ++QKGTG ARHG+ R PQ
Sbjct: 61 KKMYKQKGTGGARHGSARVPQ 81
>gi|212704584|ref|ZP_03312712.1| hypothetical protein DESPIG_02646 [Desulfovibrio piger ATCC 29098]
gi|212671983|gb|EEB32466.1| 50S ribosomal protein L4 [Desulfovibrio piger ATCC 29098]
Length = 207
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + ++ G + L+ DVF+V R +I++ VVR Q+A ++ GTH KT + VSG G K
Sbjct: 4 VKVYDQNKQECGELTLSADVFEVEARPEILNLVVRAQMAAKRAGTHMAKTRAFVSGGGVK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PW+QKGTGRAR G+ R P
Sbjct: 64 PWKQKGTGRARSGSNRSP 81
>gi|456356077|dbj|BAM90522.1| 50S ribosomal protein L4 [Agromonas oligotrophica S58]
Length = 206
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT ++ G + L+ +F + R DII R V+WQL KRQ GTH K +E+ TG
Sbjct: 1 MELKVTTLEGKEAGSVQLSDAIFGLEPRADIIQRCVQWQLNKRQAGTHKAKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KK ++QKGTG ARHG+ R PQ
Sbjct: 61 KKMYKQKGTGGARHGSARVPQ 81
>gi|66810850|ref|XP_639132.1| hypothetical protein DDB_G0283275 [Dictyostelium discoideum AX4]
gi|60467762|gb|EAL65778.1| hypothetical protein DDB_G0283275 [Dictyostelium discoideum AX4]
Length = 258
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 101 IPVTNFFNEDKGF--MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+PV NF ++ + L+ DVF VP+R D++HR+VR+Q AK QQGTH + + T
Sbjct: 51 VPVLNFNDKLSPIENIQLSKDVFSVPLRVDLLHRMVRYQRAKSQQGTHQALNMGRMERTN 110
Query: 159 KKPWRQKGTGRARHGT 174
KKP RQKG+G AR GT
Sbjct: 111 KKPTRQKGSGNARKGT 126
>gi|167748431|ref|ZP_02420558.1| hypothetical protein ANACAC_03175 [Anaerostipes caccae DSM 14662]
gi|317472036|ref|ZP_07931368.1| ribosomal protein L4/L1 family protein [Anaerostipes sp. 3_2_56FAA]
gi|167652423|gb|EDR96552.1| 50S ribosomal protein L4 [Anaerostipes caccae DSM 14662]
gi|316900440|gb|EFV22422.1| ribosomal protein L4/L1 family protein [Anaerostipes sp. 3_2_56FAA]
Length = 206
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 48/79 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + + L +F V I + ++H V QLA +QGT S KT SEV G G+K
Sbjct: 4 VSVLNMEGNEVEKLNLNDGIFGVEINEHLVHLAVVSQLANNRQGTQSAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G++R PQ
Sbjct: 64 PWRQKGTGHARQGSIRAPQ 82
>gi|332655144|ref|ZP_08420885.1| ribosomal protein L4/L1 family protein [Ruminococcaceae bacterium
D16]
gi|332516004|gb|EGJ45613.1| ribosomal protein L4/L1 family protein [Ruminococcaceae bacterium
D16]
Length = 206
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V N + G + L+ VF + + ++H VV+ LA +QGT S T +EVSG GKKPW
Sbjct: 6 VFNMAGQQVGEIELSEAVFGIEPNQAVVHEVVKNHLANCRQGTQSALTRAEVSGGGKKPW 65
Query: 163 RQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
RQKGTG AR G+ R PQ W + A KP
Sbjct: 66 RQKGTGHARQGSTRAPQ-WTHGGIVFAPKP 94
>gi|297571934|ref|YP_003697708.1| 50S ribosomal protein L4 [Arcanobacterium haemolyticum DSM 20595]
gi|296932281|gb|ADH93089.1| ribosomal protein L4/L1e [Arcanobacterium haemolyticum DSM 20595]
Length = 215
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 50/82 (60%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DL + + + G L + FD+ I +IH+VV QLA +QGTH TKT EV G
Sbjct: 3 DLKVDILDTTGAKAGSATLPAESFDLEINIPLIHQVVVAQLAAARQGTHKTKTRGEVRGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G KP++QKGTGRAR G++R P
Sbjct: 63 GVKPFKQKGTGRARQGSIRAPH 84
>gi|383775774|ref|YP_005460340.1| 50S ribosomal protein L4 [Actinoplanes missouriensis 431]
gi|381369006|dbj|BAL85824.1| putative ribosomal protein L4 [Actinoplanes missouriensis 431]
Length = 216
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L +VFDV ++H+VV QLA +QGT KT EV+G GKK
Sbjct: 4 VDVINAEGNKAGSVELPSNVFDVQANIPLMHQVVVAQLAAARQGTAKAKTRGEVAGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P++QKGTGRAR G++R PQ
Sbjct: 64 PYKQKGTGRARQGSIRAPQ 82
>gi|269837067|ref|YP_003319295.1| 50S ribosomal protein L4 [Sphaerobacter thermophilus DSM 20745]
gi|269786330|gb|ACZ38473.1| ribosomal protein L4/L1e [Sphaerobacter thermophilus DSM 20745]
Length = 209
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ +PV + ++ G + LA VF + ++H+ Q+A + GTH TKT EV G G
Sbjct: 1 MQVPVYDVTGQETGQIELADSVFGIEPNVPVMHQAYVRQMANARLGTHDTKTRGEVRGGG 60
Query: 159 KKPWRQKGTGRARHGTLRGP 178
+KPWRQKGTGRARHG++R P
Sbjct: 61 RKPWRQKGTGRARHGSIRSP 80
>gi|167767802|ref|ZP_02439855.1| hypothetical protein CLOSS21_02337 [Clostridium sp. SS2/1]
gi|317497094|ref|ZP_07955421.1| ribosomal protein L4/L1 family protein [Lachnospiraceae bacterium
5_1_63FAA]
gi|429762505|ref|ZP_19294894.1| 50S ribosomal protein L4 [Anaerostipes hadrus DSM 3319]
gi|167710541|gb|EDS21120.1| 50S ribosomal protein L4 [Clostridium sp. SS2/1]
gi|291558861|emb|CBL37661.1| LSU ribosomal protein L4P [butyrate-producing bacterium SSC/2]
gi|316895639|gb|EFV17794.1| ribosomal protein L4/L1 family protein [Lachnospiraceae bacterium
5_1_63FAA]
gi|429181495|gb|EKY22654.1| 50S ribosomal protein L4 [Anaerostipes hadrus DSM 3319]
Length = 206
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ + L ++F V I + ++H V QLA +QGT KT SEV G G+K
Sbjct: 4 VSVLNMEGKEVEKLELNDNIFGVEINEHLVHLAVVSQLANNRQGTQKAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G++R PQ
Sbjct: 64 PWRQKGTGHARQGSIRAPQ 82
>gi|260579266|ref|ZP_05847150.1| 50S ribosomal protein L4 [Corynebacterium jeikeium ATCC 43734]
gi|258602618|gb|EEW15911.1| 50S ribosomal protein L4 [Corynebacterium jeikeium ATCC 43734]
Length = 217
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V + G + L +FD ++H+VV QLA ++QGTH+TKT +VSG
Sbjct: 3 NLKLDVHTADGKTNGTVELPASIFDAEASVALMHQVVTAQLAAKRQGTHATKTRGQVSGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KP+RQKGTGRAR G++R P
Sbjct: 63 GRKPFRQKGTGRARQGSIRAPH 84
>gi|146340058|ref|YP_001205106.1| 50S ribosomal protein L4 [Bradyrhizobium sp. ORS 278]
gi|365885437|ref|ZP_09424438.1| 50S ribosomal subunit protein L4 [Bradyrhizobium sp. ORS 375]
gi|365889689|ref|ZP_09428356.1| 50S ribosomal subunit protein L4 [Bradyrhizobium sp. STM 3809]
gi|367474530|ref|ZP_09474031.1| 50S ribosomal subunit protein L4 [Bradyrhizobium sp. ORS 285]
gi|166234639|sp|A4YSJ3.1|RL4_BRASO RecName: Full=50S ribosomal protein L4
gi|146192864|emb|CAL76869.1| 50S ribosomal subunit protein L4 [Bradyrhizobium sp. ORS 278]
gi|365273167|emb|CCD86499.1| 50S ribosomal subunit protein L4 [Bradyrhizobium sp. ORS 285]
gi|365285917|emb|CCD96969.1| 50S ribosomal subunit protein L4 [Bradyrhizobium sp. ORS 375]
gi|365334554|emb|CCE00887.1| 50S ribosomal subunit protein L4 [Bradyrhizobium sp. STM 3809]
Length = 206
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT ++ G + L+ +F + R DII R V+WQL KRQ GTH K +E+ TG
Sbjct: 1 MELKVTTLEGKEAGSVQLSDAIFGLEPRADIIQRCVQWQLNKRQAGTHKAKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KK ++QKGTG ARHG+ R PQ
Sbjct: 61 KKMYKQKGTGGARHGSARVPQ 81
>gi|452853998|ref|YP_007495682.1| 50S ribosomal protein L4 [Desulfovibrio piezophilus]
gi|451897652|emb|CCH50531.1| 50S ribosomal protein L4 [Desulfovibrio piezophilus]
Length = 206
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V + N G + L+ +VF+V I+ +I++ VVR Q A ++QGTH+TK + +G G+K
Sbjct: 4 IQVVDQNNTKVGDIELSPEVFEVEIQPEILNMVVRAQRAAKRQGTHATKNRALKTGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRAR G+ R P
Sbjct: 64 PWRQKGTGRARAGSSRSP 81
>gi|325261495|ref|ZP_08128233.1| ribosomal protein L4/L1 family protein [Clostridium sp. D5]
gi|324032949|gb|EGB94226.1| ribosomal protein L4/L1 family protein [Clostridium sp. D5]
Length = 206
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 49/79 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA +QGT KT +EVSG G+K
Sbjct: 4 VSVYNIEGKEVGTIDLNDAVFGVDVNEHLVHMAVVSQLANNRQGTQKAKTRAEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|72163044|ref|YP_290701.1| 50S ribosomal protein L4 [Thermobifida fusca YX]
gi|109893650|sp|Q47LJ4.1|RL4_THEFY RecName: Full=50S ribosomal protein L4
gi|71916776|gb|AAZ56678.1| LSU ribosomal protein L4P [Thermobifida fusca YX]
Length = 222
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V + KG + L ++F + +IH+VV Q A +QGTHSTKT EV G GKK
Sbjct: 4 IEVKDREGAAKGSVELPDEIFAQKVNIPLIHQVVVAQQAAGRQGTHSTKTRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G++R PQ
Sbjct: 64 PYRQKGTGRARQGSVRAPQ 82
>gi|335427953|ref|ZP_08554873.1| 50S ribosomal protein L4 [Haloplasma contractile SSD-17B]
gi|334893879|gb|EGM32088.1| 50S ribosomal protein L4 [Haloplasma contractile SSD-17B]
Length = 207
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN+ G + LA +VF + + +++ V Q A +QGTH TKT +EV G
Sbjct: 1 MPKVALFNQSGTQVGDIQLAEEVFGIEPNQQVLYDAVIMQRASLRQGTHKTKTRTEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQ 82
>gi|455651261|gb|EMF30007.1| 50S ribosomal protein L4 [Streptomyces gancidicus BKS 13-15]
Length = 219
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 112 GFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
G + L ++FDV + +IH+VV QLA +QGTH TKT EV G GKKP+RQKGTGRA
Sbjct: 15 GSVELPAEIFDVEKVSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKKPYRQKGTGRA 74
Query: 171 RHGTLRGPQ 179
R G+ R PQ
Sbjct: 75 RQGSTRAPQ 83
>gi|182412050|ref|YP_001817116.1| 50S ribosomal protein L4 [Opitutus terrae PB90-1]
gi|177839264|gb|ACB73516.1| ribosomal protein L4/L1e [Opitutus terrae PB90-1]
Length = 210
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 54/97 (55%), Gaps = 17/97 (17%)
Query: 82 LKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKR 141
+K TV +PD T QD +P F DKG + K++I + A
Sbjct: 1 MKLTVFSPDATKSTEQDFTLPT---FEGDKGLQAV----------KEVIVAIN----ANN 43
Query: 142 QQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGP 178
+QGTHSTKT EV G GKKPWRQKGTGRAR G++R P
Sbjct: 44 RQGTHSTKTRGEVRGGGKKPWRQKGTGRARAGSIRSP 80
>gi|182418832|ref|ZP_02950097.1| ribosomal protein L4/L1 family [Clostridium butyricum 5521]
gi|237666492|ref|ZP_04526477.1| ribosomal protein, L4/L1 family [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182377329|gb|EDT74890.1| ribosomal protein L4/L1 family [Clostridium butyricum 5521]
gi|237657691|gb|EEP55246.1| ribosomal protein, L4/L1 family [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 206
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 45/66 (68%)
Query: 114 MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 173
M L VF + + +H+VV LA ++QGT STKT SEV G G KPWRQKGTGRAR G
Sbjct: 17 MELNESVFATEVNQYALHQVVVALLANKRQGTQSTKTRSEVRGGGIKPWRQKGTGRARQG 76
Query: 174 TLRGPQ 179
++R PQ
Sbjct: 77 SIRAPQ 82
>gi|311744808|ref|ZP_07718604.1| 50S ribosomal protein L4 [Aeromicrobium marinum DSM 15272]
gi|311311925|gb|EFQ81846.1| 50S ribosomal protein L4 [Aeromicrobium marinum DSM 15272]
Length = 323
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 119 DVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGP 178
D+F + +IH+VV QLA +QGTH TK+ EV G GKKP+RQKGTGRAR G++R P
Sbjct: 15 DIFGTQVNIPLIHQVVVAQLAAARQGTHDTKSRGEVRGGGKKPYRQKGTGRARQGSIRAP 74
Query: 179 QGWYYNARSKAQKPC 193
Q YN P
Sbjct: 75 Q---YNGGGVVHGPT 86
>gi|302553543|ref|ZP_07305885.1| ribosomal protein L4/L1 [Streptomyces viridochromogenes DSM 40736]
gi|302471161|gb|EFL34254.1| ribosomal protein L4/L1 [Streptomyces viridochromogenes DSM 40736]
Length = 218
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 112 GFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
G + L ++FDV + +IH+VV QLA +QGTH TKT EV G GKKP+RQKGTGRA
Sbjct: 15 GSVELPAEIFDVEKVSIPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKKPYRQKGTGRA 74
Query: 171 RHGTLRGPQ 179
R G+ R PQ
Sbjct: 75 RQGSTRAPQ 83
>gi|224370690|ref|YP_002604854.1| 50S ribosomal protein L4 [Desulfobacterium autotrophicum HRM2]
gi|259491553|sp|C0Q9X2.1|RL4_DESAH RecName: Full=50S ribosomal protein L4
gi|223693407|gb|ACN16690.1| RplD [Desulfobacterium autotrophicum HRM2]
Length = 207
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E LA +VF +P++K ++H VVR QLA+R+ GT +K SEVSG+ +K
Sbjct: 4 VDVLNRSGEKVSEAFLADEVFSIPVKKSVLHDVVRMQLARRRSGTAKSKGRSEVSGSTRK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
+RQKGTG AR G+++ P
Sbjct: 64 LYRQKGTGNARSGSVKSP 81
>gi|168334351|ref|ZP_02692538.1| ribosomal protein L4/L1e [Epulopiscium sp. 'N.t. morphotype B']
Length = 207
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + L +F V I++ ++H+ V LA ++QGT TKT +EV G G+K
Sbjct: 4 VSVLNMEGKQVGEVSLDDGIFGVEIKEHLVHQAVVSYLANQRQGTQCTKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKG GRAR G++R PQ
Sbjct: 64 PWRQKGGGRARQGSIRSPQ 82
>gi|383639970|ref|ZP_09952376.1| 50S ribosomal protein L4 [Streptomyces chartreusis NRRL 12338]
Length = 218
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 112 GFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
G + L ++FDV + +IH+VV QLA +QGTH TKT EV G GKKP+RQKGTGRA
Sbjct: 15 GSVELPAEIFDVEKVSIPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKKPYRQKGTGRA 74
Query: 171 RHGTLRGPQ 179
R G+ R PQ
Sbjct: 75 RQGSTRAPQ 83
>gi|323357371|ref|YP_004223767.1| ribosomal protein L4 [Microbacterium testaceum StLB037]
gi|323273742|dbj|BAJ73887.1| ribosomal protein L4 [Microbacterium testaceum StLB037]
Length = 220
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V + G + L D+FDV +IH+VV Q A +QGTHSTK EVSG G
Sbjct: 6 LALDVVKADGKKAGSVELPADIFDVKTNIPLIHQVVVAQRAAARQGTHSTKRRGEVSGAG 65
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
+KP++QKGTG AR G++R P
Sbjct: 66 RKPFKQKGTGNARQGSIRAPH 86
>gi|319948722|ref|ZP_08022843.1| 50S ribosomal protein L4 [Dietzia cinnamea P4]
gi|319437624|gb|EFV92623.1| 50S ribosomal protein L4 [Dietzia cinnamea P4]
Length = 229
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 86 VLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGT 145
+ T + T+ L D+ P G + L ++F V ++H+VV QLA +QGT
Sbjct: 1 MTTTENTVNLKLDVRTPA----GSTDGSVELPAEIFGVEPNLPLMHQVVVAQLAAARQGT 56
Query: 146 HSTKTISEVSGTGKKPWRQKGTGRARHGTLRGP 178
HSTKT EVSG G+KP+RQKGTGRAR G+ R P
Sbjct: 57 HSTKTRGEVSGGGRKPFRQKGTGRARQGSTRAP 89
>gi|406971379|gb|EKD95479.1| 50S ribosomal protein L4 [uncultured bacterium]
Length = 209
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 114 MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 173
+ L D+F V + D+I VR L+ +QGT STKT +EVSG GKKPW+QKGTGRAR G
Sbjct: 16 ITLNDDIFGVKPKADLIANYVRVYLSNNRQGTSSTKTRAEVSGGGKKPWKQKGTGRARVG 75
Query: 174 TLRGPQGWYYNARSKAQKP 192
+ R P W + S KP
Sbjct: 76 STRNPL-WRHGGISHGPKP 93
>gi|348176425|ref|ZP_08883319.1| 50S ribosomal protein L4 [Saccharopolyspora spinosa NRRL 18395]
Length = 227
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 48/68 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDV ++H+VV QLA +QGTH+TKT VSG GKKP+RQKGTG AR
Sbjct: 16 GTVDLPAEIFDVQANVALMHQVVVAQLAAARQGTHATKTRGMVSGGGKKPYRQKGTGNAR 75
Query: 172 HGTLRGPQ 179
G++R PQ
Sbjct: 76 QGSIRAPQ 83
>gi|22478084|gb|AAH37064.1| Mrpl4 protein, partial [Mus musculus]
Length = 306
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 66 ILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPI 125
I P S G D +L+K L + Q V + F E G L DVF
Sbjct: 46 ISEPRDSAGLL--DPVLRKCELRIPVHRRPVQAWVESLRGFEQERIGLAELHPDVFATAP 103
Query: 126 RKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGP 178
R DI+H+V WQ R+ +TKT +EVSG G+KPW+QKG+GRARHG++R P
Sbjct: 104 RLDIVHQVAIWQRNFRRISYANTKTRAEVSGGGRKPWQQKGSGRARHGSIRSP 156
>gi|260886877|ref|ZP_05898140.1| ribosomal protein L4/L1 family protein [Selenomonas sputigena ATCC
35185]
gi|330839325|ref|YP_004413905.1| ribosomal protein L4/L1e [Selenomonas sputigena ATCC 35185]
gi|402832964|ref|ZP_10881587.1| 50S ribosomal protein L4 [Selenomonas sp. CM52]
gi|260863476|gb|EEX77976.1| ribosomal protein L4/L1 family protein [Selenomonas sputigena ATCC
35185]
gi|329747089|gb|AEC00446.1| ribosomal protein L4/L1e [Selenomonas sputigena ATCC 35185]
gi|402281707|gb|EJU30333.1| 50S ribosomal protein L4 [Selenomonas sp. CM52]
Length = 207
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 49/78 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N N+ G + L VF V + ++H+ V QLA R+ GTH+TKT V G G+K
Sbjct: 4 VAVYNSANQQVGDIELNDSVFGVEMNAGLVHQAVVMQLASRRLGTHATKTRGLVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRAR G+ R P
Sbjct: 64 PWRQKGTGRARSGSTRSP 81
>gi|298243967|ref|ZP_06967774.1| ribosomal protein L4/L1e [Ktedonobacter racemifer DSM 44963]
gi|297557021|gb|EFH90885.1| ribosomal protein L4/L1e [Ktedonobacter racemifer DSM 44963]
Length = 234
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P T +N E + L+ VF V ++H+VV QL R+QG STKT SEVSG
Sbjct: 1 MPSTTVYNMAGEAVEQLELSEQVFGVTPNMAVLHQVVTAQLVNRRQGNASTKTRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
KKP+RQKGTGRAR G+ R PQ
Sbjct: 61 NKKPYRQKGTGRARQGSTRAPQ 82
>gi|170738702|ref|YP_001767357.1| 50S ribosomal protein L4 [Methylobacterium sp. 4-46]
gi|226730694|sp|B0UHW8.1|RL4_METS4 RecName: Full=50S ribosomal protein L4
gi|168192976|gb|ACA14923.1| ribosomal protein L4/L1e [Methylobacterium sp. 4-46]
Length = 206
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+T + G + + +F + R D++ R VRWQLAKRQ GTH KT SE+S T KK +
Sbjct: 5 ITTLDGGEAGSVEVNEAIFGLEPRADLLQRCVRWQLAKRQAGTHKVKTRSEISRTTKKMY 64
Query: 163 RQKGTGRARHGTLRGPQ 179
+QKGTG ARHG PQ
Sbjct: 65 KQKGTGNARHGAASAPQ 81
>gi|254470116|ref|ZP_05083520.1| ribosomal protein, L4/L1 family [Pseudovibrio sp. JE062]
gi|374332220|ref|YP_005082404.1| 50S ribosomal protein L4 [Pseudovibrio sp. FO-BEG1]
gi|211960427|gb|EEA95623.1| ribosomal protein, L4/L1 family [Pseudovibrio sp. JE062]
gi|359345008|gb|AEV38382.1| 50S ribosomal protein L4 [Pseudovibrio sp. FO-BEG1]
Length = 205
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + G + ++ ++F + R D+I RVVRWQLAKRQ GTH + SEV+GT KK
Sbjct: 3 LEVKTLGGKAAGSITVSDEIFGLEPRIDLIQRVVRWQLAKRQAGTHKSLGRSEVNGTTKK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
RQKG+G ARHG + PQ
Sbjct: 63 FVRQKGSGGARHGNRKAPQ 81
>gi|139438581|ref|ZP_01772097.1| Hypothetical protein COLAER_01095 [Collinsella aerofaciens ATCC
25986]
gi|133776120|gb|EBA39940.1| 50S ribosomal protein L4 [Collinsella aerofaciens ATCC 25986]
Length = 208
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
LA +V+ + ++H +V+ Q+A +QGT S K SEVSG GKKPWRQKGTGRAR G++
Sbjct: 19 LAAEVYGIEPNIHVMHHIVKCQMASWRQGTQSAKGRSEVSGGGKKPWRQKGTGRARQGSI 78
Query: 176 RGPQGWYYNARSKAQKP 192
R Q W + A KP
Sbjct: 79 RAAQ-WRHGGVVFAPKP 94
>gi|383865973|ref|XP_003708446.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like [Megachile
rotundata]
Length = 282
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 45/67 (67%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L DVF R DIIH+ V+WQ R +TKT +EV G G+KPWRQKGTGRAR
Sbjct: 67 GLVTLHPDVFGAAPRIDIIHQNVQWQRMYRWVCYANTKTRAEVRGGGRKPWRQKGTGRAR 126
Query: 172 HGTLRGP 178
HG++R P
Sbjct: 127 HGSIRSP 133
>gi|380011885|ref|XP_003690024.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like [Apis
florea]
Length = 280
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 43/67 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G M+L DV+ R DIIH+ V+WQ R TK SEV G GKKPWRQKG GRAR
Sbjct: 66 GLMILHPDVYGAAPRIDIIHQNVQWQKMYRFVSYAHTKVRSEVRGGGKKPWRQKGLGRAR 125
Query: 172 HGTLRGP 178
HG++R P
Sbjct: 126 HGSIRSP 132
>gi|328875550|gb|EGG23914.1| hypothetical protein DFA_06052 [Dictyostelium fasciculatum]
Length = 333
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 44/68 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L VF VP+R D++HR++RWQ AK +QGTH + + +V T KKP QKG GRAR
Sbjct: 121 GEINLLNSVFKVPLRIDLLHRMIRWQRAKARQGTHYAQNMGDVERTNKKPMAQKGNGRAR 180
Query: 172 HGTLRGPQ 179
GT Q
Sbjct: 181 QGTNHAIQ 188
>gi|158319544|ref|YP_001512051.1| 50S ribosomal protein L4 [Alkaliphilus oremlandii OhILAs]
gi|166990945|sp|A8MLE1.1|RL4_ALKOO RecName: Full=50S ribosomal protein L4
gi|158139743|gb|ABW18055.1| ribosomal protein L4/L1e [Alkaliphilus oremlandii OhILAs]
Length = 207
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N + + L+ +VF V + + ++ VV+ QLA R+QGT S KT +EV G G+K
Sbjct: 4 VAIYNVSGQQVSEIELSENVFGVEVNEHAMYEVVKNQLANRRQGTQSAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PW+QKGTGRAR G++R P
Sbjct: 64 PWKQKGTGRARVGSIRSP 81
>gi|365896256|ref|ZP_09434338.1| 50S ribosomal subunit protein L4 [Bradyrhizobium sp. STM 3843]
gi|365422969|emb|CCE06880.1| 50S ribosomal subunit protein L4 [Bradyrhizobium sp. STM 3843]
Length = 206
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT ++ G + L+ +F + R+DII R V+WQL KRQ GTH K +E+ TG
Sbjct: 1 MELKVTTLEGKEAGSVQLSDAIFGLDPRQDIIARCVQWQLNKRQAGTHKAKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KK ++QKGTG ARHG+ R PQ
Sbjct: 61 KKMYKQKGTGGARHGSARVPQ 81
>gi|317123096|ref|YP_004103099.1| 50S ribosomal protein L4P [Thermaerobacter marianensis DSM 12885]
gi|315593076|gb|ADU52372.1| LSU ribosomal protein L4P [Thermaerobacter marianensis DSM 12885]
Length = 212
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G + L+ VF P+R+ ++H+ V LA +++GT +TKT VSG G+K
Sbjct: 4 VAVYNTRGERVGEIELSETVFGAPVREALMHQAVVRYLANQRRGTAATKTRGMVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G++R P
Sbjct: 64 PWRQKGTGRARQGSIRAPH 82
>gi|429758166|ref|ZP_19290685.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 181 str.
F0379]
gi|429173825|gb|EKY15334.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 181 str.
F0379]
Length = 216
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V + + G + L +VFDV ++H+VV QLA +QGTH+TKT VSG GKK
Sbjct: 9 IDVLDLKGKKAGTVDLPAEVFDVETNIPLMHQVVVAQLAAGRQGTHATKTRGMVSGGGKK 68
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTG AR G++R P
Sbjct: 69 PFRQKGTGNARQGSIRAPH 87
>gi|452909991|ref|ZP_21958674.1| LSU ribosomal protein L4p (L1e) [Kocuria palustris PEL]
gi|452834951|gb|EME37749.1| LSU ribosomal protein L4p (L1e) [Kocuria palustris PEL]
Length = 208
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FD ++H+VV QLA +QGTH TKT +EVSG G+KP++QKGTGRAR G++
Sbjct: 10 LPAEIFDAKSSVPLMHQVVVAQLAAARQGTHKTKTRAEVSGAGRKPFKQKGTGRARQGSI 69
Query: 176 RGPQ 179
R PQ
Sbjct: 70 REPQ 73
>gi|291451912|ref|ZP_06591302.1| 50S ribosomal protein L4 [Streptomyces albus J1074]
gi|359146077|ref|ZP_09179720.1| 50S ribosomal protein L4 [Streptomyces sp. S4]
gi|421739976|ref|ZP_16178257.1| 50S ribosomal protein L4, bacterial/organelle [Streptomyces sp.
SM8]
gi|291354861|gb|EFE81763.1| 50S ribosomal protein L4 [Streptomyces albus J1074]
gi|406691568|gb|EKC95308.1| 50S ribosomal protein L4, bacterial/organelle [Streptomyces sp.
SM8]
Length = 217
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + + G + L ++FD +IH+VV QLA +QGTH TK+ EV G G+K
Sbjct: 4 IDILSPAGDKAGTVELPAEIFDAKTSVPLIHQVVVAQLAAARQGTHKTKSRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G+ R PQ
Sbjct: 64 PYRQKGTGRARQGSTRAPQ 82
>gi|224477219|ref|YP_002634825.1| 50S ribosomal protein L4 [Staphylococcus carnosus subsp. carnosus
TM300]
gi|254803753|sp|B9DM18.1|RL4_STACT RecName: Full=50S ribosomal protein L4
gi|222421826|emb|CAL28640.1| 50S ribosomal protein L4 [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 207
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 44/68 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ VF + KD+I + Q A +QGTHS K S V G G+KPWRQKGTGRAR
Sbjct: 15 GSVELSDSVFAIEPNKDVIFEAINLQRASLRQGTHSVKNRSAVRGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQ 179
GT+R PQ
Sbjct: 75 QGTIRAPQ 82
>gi|153816251|ref|ZP_01968919.1| hypothetical protein RUMTOR_02500 [Ruminococcus torques ATCC 27756]
gi|145846434|gb|EDK23352.1| 50S ribosomal protein L4 [Ruminococcus torques ATCC 27756]
Length = 206
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 48/79 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ + L VF V + + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVDTIELNDAVFGVEVNEHLVHMAVVNQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRAPQ 82
>gi|345850549|ref|ZP_08803544.1| 50S ribosomal protein L4 [Streptomyces zinciresistens K42]
gi|345638030|gb|EGX59542.1| 50S ribosomal protein L4 [Streptomyces zinciresistens K42]
Length = 218
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 109 EDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGT 167
E G + L ++FDV + ++H+VV QLA +QGTH TKT EV G G+KP+RQKGT
Sbjct: 12 EKAGSVELPAEIFDVEKVSVPLLHQVVVAQLAAARQGTHKTKTRGEVRGGGRKPYRQKGT 71
Query: 168 GRARHGTLRGPQ 179
GRAR G+ R PQ
Sbjct: 72 GRARQGSTRAPQ 83
>gi|317501775|ref|ZP_07959961.1| ribosomal protein L4/L1 family protein [Lachnospiraceae bacterium
8_1_57FAA]
gi|331088704|ref|ZP_08337614.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 3_1_46FAA]
gi|336439587|ref|ZP_08619198.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 1_1_57FAA]
gi|316896808|gb|EFV18893.1| ribosomal protein L4/L1 family protein [Lachnospiraceae bacterium
8_1_57FAA]
gi|330407227|gb|EGG86730.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 3_1_46FAA]
gi|336015816|gb|EGN45618.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 1_1_57FAA]
Length = 206
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 48/79 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ + L VF V + + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVDTIELNDAVFGVEVNEHLVHMAVVNQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRAPQ 82
>gi|300779844|ref|ZP_07089700.1| ribosomal protein L4/L1 family protein [Corynebacterium genitalium
ATCC 33030]
gi|300533954|gb|EFK55013.1| ribosomal protein L4/L1 family protein [Corynebacterium genitalium
ATCC 33030]
Length = 220
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V KG + L ++FD ++H+VV QLA +QGTH TKT EV G
Sbjct: 3 NLTLDVHTADGATKGTVELPAELFDREASVPLMHQVVNAQLAAARQGTHKTKTRGEVRGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KP+RQKGTGRAR G++R P
Sbjct: 63 GRKPFRQKGTGRARQGSIRAPH 84
>gi|296141114|ref|YP_003648357.1| 50S ribosomal protein L4 [Tsukamurella paurometabola DSM 20162]
gi|296029248|gb|ADG80018.1| ribosomal protein L4/L1e [Tsukamurella paurometabola DSM 20162]
Length = 217
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V + G + L +FDV ++H+VV QLA + GTHSTKT EV G G
Sbjct: 4 LTLDVKTADGKTDGTVELPAAIFDVEPNISLMHQVVIAQLAAARAGTHSTKTRGEVRGGG 63
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
+KP+RQKGTGRAR G+ R PQ
Sbjct: 64 RKPYRQKGTGRARQGSTRAPQ 84
>gi|163840905|ref|YP_001625310.1| 50S ribosomal protein L4/L1 family protein [Renibacterium
salmoninarum ATCC 33209]
gi|162954381|gb|ABY23896.1| LSU ribosomal protein L4/L1 family [Renibacterium salmoninarum ATCC
33209]
Length = 226
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FDV ++H+VV QLA +QGT TKT +EVSG G+KP++QKGTGRAR G++
Sbjct: 10 LPAEIFDVQTNVPLLHQVVVAQLAAARQGTQKTKTRAEVSGAGRKPFKQKGTGRARQGSI 69
Query: 176 RGPQ 179
R P
Sbjct: 70 RAPH 73
>gi|291544461|emb|CBL17570.1| LSU ribosomal protein L4P [Ruminococcus champanellensis 18P13]
Length = 207
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L+ VF + + ++H +V LA ++QGT ST T +EVSG G+KPWRQKGTG AR G++
Sbjct: 19 LSDAVFGITPNEAVMHAMVVNYLANQRQGTQSTLTRTEVSGGGRKPWRQKGTGHARQGSI 78
Query: 176 RGPQGWYYNARSKAQKP 192
R PQ WY+ + KP
Sbjct: 79 RAPQ-WYHGGVALGPKP 94
>gi|218885188|ref|YP_002434509.1| 50S ribosomal protein L4 [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|226730654|sp|B8DN97.1|RL4_DESVM RecName: Full=50S ribosomal protein L4
gi|218756142|gb|ACL07041.1| ribosomal protein L4/L1e [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 206
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 54/79 (68%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
V+ V + ++ G + LA +VF+V ++ +I++ VVR A + GTH+TKT + VSG G
Sbjct: 3 VVKVYDQNKKEAGELTLAPEVFEVEVKPEILNLVVRAHRAGLRSGTHATKTRAFVSGGGA 62
Query: 160 KPWRQKGTGRARHGTLRGP 178
KPWRQKGTGRAR G+ R P
Sbjct: 63 KPWRQKGTGRARSGSNRSP 81
>gi|334338902|ref|YP_004543882.1| 50S ribosomal protein L4 [Desulfotomaculum ruminis DSM 2154]
gi|334090256|gb|AEG58596.1| ribosomal protein L4/L1e [Desulfotomaculum ruminis DSM 2154]
Length = 206
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E G + L +F + + ++H V QLA ++QGTH TKT +EV G G+K
Sbjct: 4 VALYNISGEQVGEVELNDAIFGIEPNEPVLHDAVVMQLANQRQGTHDTKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRAR G+ R P
Sbjct: 64 PWRQKGTGRARAGSTRSP 81
>gi|406944937|gb|EKD76572.1| 50S ribosomal protein L4 [uncultured bacterium]
Length = 211
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 99 LVIPVTNFFNEDK--GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSG 156
+ + V F NE K G VL VF V ++ D++H+VV Q A ++ TKT EV G
Sbjct: 1 MALNVKIFNNEGKVVGEQVLNPKVFGVKVKTDVVHQVVVSQAANVREAIAHTKTKGEVRG 60
Query: 157 TGKKPWRQKGTGRARHGTLRGPQ 179
G+KPW+QKGTGRAR G+ R PQ
Sbjct: 61 GGRKPWKQKGTGRARQGSTRNPQ 83
>gi|411002578|ref|ZP_11378907.1| 50S ribosomal protein L4 [Streptomyces globisporus C-1027]
Length = 216
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 49/79 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + + G + L ++FD +IH+VV QLA +QGTH TK EV G GKK
Sbjct: 4 IDILSPAGDKAGTVELPAEIFDAKTSVPLIHQVVVAQLAAARQGTHKTKRRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G+ R PQ
Sbjct: 64 PYRQKGTGRARQGSTRAPQ 82
>gi|365128104|ref|ZP_09340420.1| 50S ribosomal protein L4 [Subdoligranulum sp. 4_3_54A2FAA]
gi|363623451|gb|EHL74570.1| 50S ribosomal protein L4 [Subdoligranulum sp. 4_3_54A2FAA]
Length = 207
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L+ VF + + ++H V LA ++QGT STKT SEVSG G+KPWRQKGTGRAR G+
Sbjct: 19 LSDAVFGITPNEKVMHAAVVNFLANQRQGTQSTKTRSEVSGGGRKPWRQKGTGRARQGST 78
Query: 176 RGPQGWYYNARSKAQKP 192
R PQ W + + KP
Sbjct: 79 RSPQ-WTHGGVALGPKP 94
>gi|239990031|ref|ZP_04710695.1| 50S ribosomal protein L4 [Streptomyces roseosporus NRRL 11379]
gi|291447045|ref|ZP_06586435.1| 50S ribosomal protein L4 [Streptomyces roseosporus NRRL 15998]
gi|291349992|gb|EFE76896.1| 50S ribosomal protein L4 [Streptomyces roseosporus NRRL 15998]
Length = 216
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 49/79 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + + G + L ++FD +IH+VV QLA +QGTH TK EV G GKK
Sbjct: 4 IDILSPAGDKAGTVELPAEIFDAKTSVPLIHQVVVAQLAAARQGTHKTKRRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G+ R PQ
Sbjct: 64 PYRQKGTGRARQGSTRAPQ 82
>gi|346312036|ref|ZP_08854030.1| 50S ribosomal protein L4/L1 [Collinsella tanakaei YIT 12063]
gi|345899130|gb|EGX68981.1| 50S ribosomal protein L4/L1 [Collinsella tanakaei YIT 12063]
Length = 208
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
LA +V+ + ++H +V Q A +QGT S KT SEVSG GKKPWRQKGTGRAR G+
Sbjct: 19 LAAEVYGIEPNLHVMHHIVTCQQACWRQGTQSAKTRSEVSGGGKKPWRQKGTGRARQGST 78
Query: 176 RGPQGWYYNARSKAQKP 192
R PQ W + A KP
Sbjct: 79 RSPQ-WRHGGVVFAPKP 94
>gi|119508437|ref|NP_075656.2| 39S ribosomal protein L4, mitochondrial [Mus musculus]
gi|81881827|sp|Q9DCU6.1|RM04_MOUSE RecName: Full=39S ribosomal protein L4, mitochondrial; Short=L4mt;
Short=MRP-L4
gi|12832465|dbj|BAB22118.1| unnamed protein product [Mus musculus]
gi|13559359|dbj|BAB40839.1| mitochondrial ribosomal protein L4 (L4mt) [Mus musculus]
gi|37572295|gb|AAH39983.2| Mitochondrial ribosomal protein L4 [Mus musculus]
gi|38511681|gb|AAH61095.1| Mitochondrial ribosomal protein L4 [Mus musculus]
gi|148693202|gb|EDL25149.1| mitochondrial ribosomal protein L4, isoform CRA_c [Mus musculus]
Length = 294
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 66 ILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPI 125
I P S G D +L+K L + Q V + F E G L DVF
Sbjct: 34 ISEPRDSAGLL--DPVLRKCELRIPVHRRPVQAWVESLRGFEQERIGLAELHPDVFATAP 91
Query: 126 RKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGP 178
R DI+H+V WQ R+ +TKT +EVSG G+KPW+QKG+GRARHG++R P
Sbjct: 92 RLDIVHQVAIWQRNFRRISYANTKTRAEVSGGGRKPWQQKGSGRARHGSIRSP 144
>gi|227485524|ref|ZP_03915840.1| ribosomal protein L4 [Anaerococcus lactolyticus ATCC 51172]
gi|227236523|gb|EEI86538.1| ribosomal protein L4 [Anaerococcus lactolyticus ATCC 51172]
Length = 207
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P N N E+ G + L +F + + ++ V++ QLA ++QGT S KT +EV G
Sbjct: 1 MPKVNILNIKGENVGELELNETIFATKVSEHAVYEVIKNQLANKRQGTQSAKTRAEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KP+RQKGTGRAR G++R P
Sbjct: 61 GRKPFRQKGTGRARQGSIRAPH 82
>gi|381398000|ref|ZP_09923408.1| ribosomal protein L4/L1e [Microbacterium laevaniformans OR221]
gi|380774666|gb|EIC07962.1| ribosomal protein L4/L1e [Microbacterium laevaniformans OR221]
Length = 220
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V + + G + L +FDV +IH+VV QLA +QGTHSTK EVSG G
Sbjct: 6 LALDVHSPSGKKAGSVALPAALFDVKTNIPLIHQVVVAQLAAARQGTHSTKRRGEVSGAG 65
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
+KP++QKGTG AR G++R P
Sbjct: 66 RKPFKQKGTGNARQGSIRAPH 86
>gi|343526300|ref|ZP_08763250.1| 50S ribosomal protein L4 [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
gi|343394251|gb|EGV06799.1| 50S ribosomal protein L4 [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
Length = 207
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 48/71 (67%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDAVFGIELNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRSPQ 82
>gi|227509932|ref|ZP_03939981.1| 50S ribosomal protein L4 [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227190538|gb|EEI70605.1| 50S ribosomal protein L4 [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 207
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 44/68 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L DVF + +++ V Q A R+QGTHS K S V G GKKPWRQKGTGRAR
Sbjct: 15 GTVSLNDDVFGIEPNNNVVFDAVVMQRASRRQGTHSVKNRSAVRGGGKKPWRQKGTGRAR 74
Query: 172 HGTLRGPQ 179
G++R PQ
Sbjct: 75 QGSIRSPQ 82
>gi|402849274|ref|ZP_10897514.1| LSU ribosomal protein L4p (L1e) [Rhodovulum sp. PH10]
gi|402500587|gb|EJW12259.1| LSU ribosomal protein L4p (L1e) [Rhodovulum sp. PH10]
Length = 206
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V E G + L ++F + R D+I R + WQL++RQ+GTH+ K +E+ TG
Sbjct: 1 MQLDVKTLEGEAAGSIDLDQEIFGLEPRADLIQRCIVWQLSRRQRGTHAVKNRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KK ++QKGTG ARHG+ R PQ
Sbjct: 61 KKMYKQKGTGSARHGSARAPQ 81
>gi|387928109|ref|ZP_10130787.1| 50S ribosomal protein L4 [Bacillus methanolicus PB1]
gi|387587695|gb|EIJ80017.1| 50S ribosomal protein L4 [Bacillus methanolicus PB1]
Length = 207
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G + L VF + K ++ V Q A +QGTH TK SEVSG
Sbjct: 1 MPKVALFNQNGSQVGEIELNDAVFGIEPNKHVLFEAVVMQRASLRQGTHKTKIRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQ 82
>gi|295398289|ref|ZP_06808331.1| ribosomal protein L4/L1 family protein [Aerococcus viridans ATCC
11563]
gi|294973428|gb|EFG49213.1| ribosomal protein L4/L1 family protein [Aerococcus viridans ATCC
11563]
Length = 207
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L +VF + ++ I+ VV Q A +QGTH K SEVSG G+KPWRQKGTGRAR
Sbjct: 15 GEITLNDEVFAIEPNENAIYDVVIMQQASLRQGTHKVKGRSEVSGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQGWYYNARS 187
G++R PQ W R+
Sbjct: 75 QGSIRSPQ-WVGGGRA 89
>gi|402299395|ref|ZP_10819006.1| 50S ribosomal protein L4 [Bacillus alcalophilus ATCC 27647]
gi|401725433|gb|EJS98718.1| 50S ribosomal protein L4 [Bacillus alcalophilus ATCC 27647]
Length = 207
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN+ G + L +F + K ++H + Q A +QGTH TK SEV G
Sbjct: 1 MPKVALFNQSGSQVGDIELVESIFGLEPNKAVLHDAIVMQQASLRQGTHKTKGRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR GT+R PQ
Sbjct: 61 GRKPWRQKGTGRARQGTIRAPQ 82
>gi|334336187|ref|YP_004541339.1| 50S ribosomal protein L4 [Isoptericola variabilis 225]
gi|334106555|gb|AEG43445.1| ribosomal protein L4/L1e [Isoptericola variabilis 225]
Length = 235
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + + G L +VFDV +IH+VV Q A +QGTH+TKT +V G GKK
Sbjct: 6 VDVLDATGKKAGTAELPAEVFDVVTNVPLIHQVVVAQRAAARQGTHATKTRGDVRGGGKK 65
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P++QKGTGRAR G+ R PQ
Sbjct: 66 PYKQKGTGRARQGSTRAPQ 84
>gi|403723479|ref|ZP_10945634.1| 50S ribosomal protein L4 [Gordonia rhizosphera NBRC 16068]
gi|403205995|dbj|GAB89965.1| 50S ribosomal protein L4 [Gordonia rhizosphera NBRC 16068]
Length = 224
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 46/68 (67%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV Q A +QGTH+TKT VSG G KP+RQKGTGRAR
Sbjct: 27 GTVDLPAELFDAPANIALMHQVVVAQQAAGRQGTHATKTRGAVSGGGAKPYRQKGTGRAR 86
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 87 QGSTRAPQ 94
>gi|225707434|gb|ACO09563.1| Mitochondrial 39S ribosomal protein L4 [Osmerus mordax]
Length = 302
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 46/71 (64%)
Query: 108 NEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGT 167
+E G + L DVF +P R DI+H V WQ ++ +TK SEV G GKKPW QKG+
Sbjct: 83 SEPLGLVDLHPDVFALPARIDILHEVELWQRNYKRISHANTKVRSEVRGGGKKPWNQKGS 142
Query: 168 GRARHGTLRGP 178
GRARHG++R P
Sbjct: 143 GRARHGSIRSP 153
>gi|326803034|ref|YP_004320852.1| 50S ribosomal protein L4 [Aerococcus urinae ACS-120-V-Col10a]
gi|326650179|gb|AEA00362.1| 50S ribosomal protein L4 [Aerococcus urinae ACS-120-V-Col10a]
Length = 207
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 105 NFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
N + +D G + + D+F + + I V+ Q A R+QGTH+ K S VSG G+KP
Sbjct: 5 NLYKQDGSQNGEIEVKDDIFAIEPNETAIFDVILMQRASRRQGTHAVKNRSAVSGGGRKP 64
Query: 162 WRQKGTGRARHGTLRGPQGWYYNARS 187
WRQKGTGRAR G++R PQ W R+
Sbjct: 65 WRQKGTGRARQGSIRAPQ-WVGGGRA 89
>gi|313888849|ref|ZP_07822510.1| 50S ribosomal protein L4 [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845218|gb|EFR32618.1| 50S ribosomal protein L4 [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 207
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L+ +F P+ ++ VV+ LA ++QGTHS KT +EV G G+KPWRQKGTGRAR G++
Sbjct: 19 LSEGLFAAPVSTHAVYLVVKNILANKRQGTHSAKTRAEVRGGGRKPWRQKGTGRARQGSI 78
Query: 176 RGPQGWYYNARSKAQKP 192
R PQ W A+KP
Sbjct: 79 RSPQ-WRGGGVVFAKKP 94
>gi|415886278|ref|ZP_11548101.1| 50S ribosomal protein L4 [Bacillus methanolicus MGA3]
gi|387588931|gb|EIJ81252.1| 50S ribosomal protein L4 [Bacillus methanolicus MGA3]
Length = 207
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G + L VF + K ++ V Q A +QGTH TK SEVSG
Sbjct: 1 MPKVALFNQNGSQVGEIELNDAVFGIEPNKHVLFEAVVMQRASLRQGTHKTKIRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQ 82
>gi|408680098|ref|YP_006879925.1| LSU ribosomal protein L4p [Streptomyces venezuelae ATCC 10712]
gi|328884427|emb|CCA57666.1| LSU ribosomal protein L4p [Streptomyces venezuelae ATCC 10712]
Length = 216
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + + G + L ++F + +IH+VV QLA +QGTH TKT EV G GKK
Sbjct: 4 IDILSPAGDKTGTVELPEEIFGAKVSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G+ R PQ
Sbjct: 64 PYRQKGTGRARQGSTRAPQ 82
>gi|270291132|ref|ZP_06197355.1| 50S ribosomal protein L4/L1 [Pediococcus acidilactici 7_4]
gi|304385413|ref|ZP_07367758.1| ribosomal protein L4/L1 family protein [Pediococcus acidilactici
DSM 20284]
gi|418069690|ref|ZP_12706967.1| 50S ribosomal protein L4P [Pediococcus acidilactici MA18/5M]
gi|427442937|ref|ZP_18925765.1| 50S ribosomal protein L4/L1 [Pediococcus lolii NGRI 0510Q]
gi|270280528|gb|EFA26363.1| 50S ribosomal protein L4/L1 [Pediococcus acidilactici 7_4]
gi|304328620|gb|EFL95841.1| ribosomal protein L4/L1 family protein [Pediococcus acidilactici
DSM 20284]
gi|357536221|gb|EHJ20252.1| 50S ribosomal protein L4P [Pediococcus acidilactici MA18/5M]
gi|425786585|dbj|GAC46553.1| 50S ribosomal protein L4/L1 [Pediococcus lolii NGRI 0510Q]
Length = 207
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 104 TNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ F +D G + L D+F + D++ V Q A +QGTH+ K S V G GKK
Sbjct: 4 VSLFKQDGTQNGTVELNADIFGIEPNNDVVFEAVVMQRASMRQGTHAVKNRSAVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G++R PQ
Sbjct: 64 PWRQKGTGRARQGSIRSPQ 82
>gi|291549415|emb|CBL25677.1| LSU ribosomal protein L4P [Ruminococcus torques L2-14]
Length = 206
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 48/79 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ + L VF V + + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVDTIELNDAVFGVEVNEHLVHMAVVNQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|197303813|ref|ZP_03168849.1| hypothetical protein RUMLAC_02552 [Ruminococcus lactaris ATCC
29176]
gi|197297106|gb|EDY31670.1| 50S ribosomal protein L4 [Ruminococcus lactaris ATCC 29176]
Length = 206
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 48/79 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ + L VF V + + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVDTIELNDAVFGVEVNEHLVHMAVVNQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|332685664|ref|YP_004455438.1| 50S ribosomal protein L4 [Melissococcus plutonius ATCC 35311]
gi|379726738|ref|YP_005318923.1| 50S ribosomal protein L4p [Melissococcus plutonius DAT561]
gi|332369673|dbj|BAK20629.1| LSU ribosomal protein L4p (L1e) [Melissococcus plutonius ATCC
35311]
gi|376317641|dbj|BAL61428.1| 50S ribosomal protein L4p [Melissococcus plutonius DAT561]
Length = 207
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P F +D G M L D+F + +++++ + Q A +QGTH+ K S V G
Sbjct: 1 MPKIALFKQDGTKNGEMTLNEDIFGIDPNQNVVYDAIIMQRASLRQGTHAVKNRSAVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQ 82
>gi|227832220|ref|YP_002833927.1| 50S ribosomal protein L4 [Corynebacterium aurimucosum ATCC 700975]
gi|262183925|ref|ZP_06043346.1| 50S ribosomal protein L4 [Corynebacterium aurimucosum ATCC 700975]
gi|254803728|sp|C3PKQ3.1|RL4_CORA7 RecName: Full=50S ribosomal protein L4
gi|227453236|gb|ACP31989.1| 50S ribosomal protein L4 [Corynebacterium aurimucosum ATCC 700975]
Length = 220
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V + G + L ++FD ++H+VV QLA +QGTH TKT EV G
Sbjct: 3 NLKLDVQTADGKTNGTVELPAELFDTEASIALMHQVVNAQLAAARQGTHKTKTRGEVRGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KP+RQKGTGRAR G++R P
Sbjct: 63 GRKPFRQKGTGRARQGSIRAPH 84
>gi|313673466|ref|YP_004051577.1| 50S ribosomal protein L4/l1e [Calditerrivibrio nitroreducens DSM
19672]
gi|312940222|gb|ADR19414.1| ribosomal protein L4/L1e [Calditerrivibrio nitroreducens DSM 19672]
Length = 207
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 53/79 (67%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
++ V N NE G + ++ ++ P++ +IH VV+ QLA R+ GTH+T + + G G+
Sbjct: 3 LVDVLNTKNEKVGQVEISDNIMTYPVKPWLIHEVVKMQLACRRAGTHATLNRALIEGGGR 62
Query: 160 KPWRQKGTGRARHGTLRGP 178
KPW+QKGTGRAR G++R P
Sbjct: 63 KPWKQKGTGRARAGSIRSP 81
>gi|325000491|ref|ZP_08121603.1| 50S ribosomal protein L4 [Pseudonocardia sp. P1]
Length = 228
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 46/68 (67%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L VFDV ++H+VV QL +QG+H TKT EV G GKKP+RQKGTGRAR
Sbjct: 15 GSVELPDHVFDVTANIALMHQVVTAQLNAARQGSHDTKTRGEVRGGGKKPYRQKGTGRAR 74
Query: 172 HGTLRGPQ 179
G++R PQ
Sbjct: 75 QGSVRAPQ 82
>gi|160902255|ref|YP_001567836.1| 50S ribosomal protein L4 [Petrotoga mobilis SJ95]
gi|189029512|sp|A9BHA4.1|RL4_PETMO RecName: Full=50S ribosomal protein L4
gi|160359899|gb|ABX31513.1| ribosomal protein L4/L1e [Petrotoga mobilis SJ95]
Length = 221
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + N NE G + + ++F++ D+++R V QL ++ GT STKT SEVSG G+K
Sbjct: 4 IDIYNIQNEKVGTLDIKDEIFNIDPNMDVLYRYVDMQLTNKRAGTASTKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PW QK TGRAR G++R P
Sbjct: 64 PWPQKHTGRARAGSIRSP 81
>gi|238922831|ref|YP_002936344.1| ribosomal protein L4/L1e [Eubacterium rectale ATCC 33656]
gi|259491558|sp|C4ZBD5.1|RL4_EUBR3 RecName: Full=50S ribosomal protein L4
gi|238874503|gb|ACR74210.1| ribosomal protein L4/L1e [Eubacterium rectale ATCC 33656]
gi|291523733|emb|CBK89320.1| LSU ribosomal protein L4P [Eubacterium rectale DSM 17629]
gi|291528801|emb|CBK94387.1| LSU ribosomal protein L4P [Eubacterium rectale M104/1]
Length = 206
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ + L +F V I + ++H V QLA ++QGT KT SEV G G+K
Sbjct: 4 VAVYNMEGKEVDKIELNDSIFGVEINEHLVHMAVLQQLANKRQGTQKAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G+ R PQ
Sbjct: 64 PWRQKGTGHARQGSTRSPQ 82
>gi|406917511|gb|EKD56283.1| 50S ribosomal protein L4 [uncultured bacterium]
Length = 248
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L +F + I D+IH+ V QLA +Q + +KT SEV+G+GKKPWRQKGTGRAR G++
Sbjct: 19 LNDKIFGLKINNDLIHQAVVTQLANARQSSAHSKTRSEVAGSGKKPWRQKGTGRARSGSV 78
Query: 176 RGP 178
R P
Sbjct: 79 RNP 81
>gi|126732273|ref|ZP_01748073.1| 50S ribosomal protein L4 [Sagittula stellata E-37]
gi|126707142|gb|EBA06208.1| 50S ribosomal protein L4 [Sagittula stellata E-37]
Length = 205
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 68/135 (50%), Gaps = 16/135 (11%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L +F + R DI+HRVVRWQ K Q GTH KT SEVS + KK
Sbjct: 3 LDVINLDGGSAGEVELDEALFGLEPRADILHRVVRWQRNKAQAGTHKVKTRSEVSYSTKK 62
Query: 161 PWRQKGTGRARHGTLRGP---QGWYYNA---RSKAQKPCYKVEQEGAAAWVEDC------ 208
+RQKGTG ARHG+ + P +G Y RS A + KV G + D
Sbjct: 63 IYRQKGTGGARHGSRKAPIFRKGGIYKGPTPRSHAHELPKKVRALGLKMALSDKARNGAL 122
Query: 209 ----SICSSSRRKAL 219
SI +S+ KAL
Sbjct: 123 IVIDSIDGASKTKAL 137
>gi|374853563|dbj|BAL56468.1| 50S ribosomal protein L4 [uncultured prokaryote]
Length = 209
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V N + G M L +F + ++HRVV +LA ++QGTHST T EV G G+KPW
Sbjct: 6 VYNAQGQPVGEMELNPTLFSRTAKVSVLHRVVVAELAHQRQGTHSTLTRGEVRGGGRKPW 65
Query: 163 RQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
RQK TGRAR G++R PQ W + KP
Sbjct: 66 RQKHTGRARQGSIRAPQ-WRHGGIVHGPKP 94
>gi|350269369|ref|YP_004880677.1| 50S ribosomal protein L4 [Oscillibacter valericigenes Sjm18-20]
gi|348594211|dbj|BAK98171.1| 50S ribosomal protein L4 [Oscillibacter valericigenes Sjm18-20]
Length = 207
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L+ VF + + ++H V+ LA +QGT S T +EVSG GKK
Sbjct: 4 VEVLNMSGTKVGEVTLSDAVFGIEPNEAVVHEAVKNHLANCRQGTQSALTRAEVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PWRQKGTG AR G+ R PQ W + A KP
Sbjct: 64 PWRQKGTGHARQGSTRAPQ-WTHGGIVFAPKP 94
>gi|225351044|ref|ZP_03742067.1| hypothetical protein BIFPSEUDO_02626 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225158500|gb|EEG71742.1| hypothetical protein BIFPSEUDO_02626 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 221
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 6/91 (6%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVF-----DVPIRKDIIHRVVRWQLAKRQQGTHSTKTIS 152
++ + VT+ G + ++F +V R +IH+VV Q A +QGTH+TKT
Sbjct: 3 NVTLNVTDNQGNAAGTVEAPAEIFGFSAEEVQSRIPLIHQVVVAQRAAARQGTHATKTRG 62
Query: 153 EVSGTGKKPWRQKGTGRARHGTLRGPQGWYY 183
VSG G+KPW+QKGTGRAR G++R PQ WY+
Sbjct: 63 MVSGGGRKPWKQKGTGRARQGSIRAPQ-WYH 92
>gi|355575077|ref|ZP_09044644.1| 50S ribosomal protein L4/L1 [Olsenella sp. oral taxon 809 str.
F0356]
gi|354817721|gb|EHF02216.1| 50S ribosomal protein L4/L1 [Olsenella sp. oral taxon 809 str.
F0356]
Length = 207
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N + G + L+ +VF + ++H+VV A +QGTHSTK S VSG G K
Sbjct: 4 IEVKNVEGKAAGTVELSDNVFGIEPNIPVMHQVVVAYEASLRQGTHSTKNRSAVSGGGVK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR GT+R PQ
Sbjct: 64 PFRQKGTGRARQGTIRAPQ 82
>gi|182436626|ref|YP_001824345.1| 50S ribosomal protein L4 [Streptomyces griseus subsp. griseus NBRC
13350]
gi|326777248|ref|ZP_08236513.1| ribosomal protein L4/L1e [Streptomyces griseus XylebKG-1]
gi|365860363|ref|ZP_09400176.1| 50S ribosomal protein L4 [Streptomyces sp. W007]
gi|178465142|dbj|BAG19662.1| putative 50S ribosomal protein L4 [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326657581|gb|EGE42427.1| ribosomal protein L4/L1e [Streptomyces griseus XylebKG-1]
gi|364010215|gb|EHM31142.1| 50S ribosomal protein L4 [Streptomyces sp. W007]
Length = 216
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 49/79 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + + G + L ++FD +IH+VV QLA +QGTH TK EV G GKK
Sbjct: 4 IDILSPAGDKAGTVDLPAEIFDAKTSVPLIHQVVVAQLAAARQGTHKTKRRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G+ R PQ
Sbjct: 64 PYRQKGTGRARQGSTRAPQ 82
>gi|83949794|ref|ZP_00958527.1| 50S ribosomal protein L4 [Roseovarius nubinhibens ISM]
gi|83837693|gb|EAP76989.1| 50S ribosomal protein L4 [Roseovarius nubinhibens ISM]
Length = 205
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 44/67 (65%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L D+F + R DI+HRVVRWQ K QQGTH KT SE S + KK +RQKGTG AR
Sbjct: 14 GSVDLGEDIFGLEPRADILHRVVRWQRNKAQQGTHKVKTRSETSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGP 178
HG P
Sbjct: 74 HGDRNAP 80
>gi|84494785|ref|ZP_00993904.1| 50S ribosomal protein L4 [Janibacter sp. HTCC2649]
gi|84384278|gb|EAQ00158.1| 50S ribosomal protein L4 [Janibacter sp. HTCC2649]
Length = 331
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I T N D L ++FDV +IH+VV QLA +QGTHSTKT EV G G
Sbjct: 1 MTIMATQTVNVD-----LPAEIFDVQTNIPLIHQVVVAQLAAARQGTHSTKTRGEVRGGG 55
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
+KP RQKGTGRAR G+ R P
Sbjct: 56 RKPHRQKGTGRARAGSTRAPH 76
>gi|383806909|ref|ZP_09962470.1| 50S ribosomal protein L4 [Candidatus Aquiluna sp. IMCC13023]
gi|383299339|gb|EIC91953.1| 50S ribosomal protein L4 [Candidatus Aquiluna sp. IMCC13023]
Length = 216
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 48/68 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L G +FDV +IH+VV QLA +QGT ST EVSG+G+KP++QKGTGRAR
Sbjct: 15 GSVDLPGSIFDVQTNVPLIHQVVVAQLAAARQGTQSTLRRGEVSGSGRKPFKQKGTGRAR 74
Query: 172 HGTLRGPQ 179
G++R PQ
Sbjct: 75 QGSIRMPQ 82
>gi|302336381|ref|YP_003801588.1| 50S ribosomal protein L4 [Olsenella uli DSM 7084]
gi|301320221|gb|ADK68708.1| LSU ribosomal protein L4P [Olsenella uli DSM 7084]
Length = 208
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 49/79 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N + G + L+ VF + ++H+VV A +QGTHSTK S VSG G K
Sbjct: 4 IEVKNVEGKAAGEVELSDSVFGITPNIPVMHQVVVAYEASMRQGTHSTKNRSSVSGGGAK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR GT+R PQ
Sbjct: 64 PYRQKGTGRARQGTIRAPQ 82
>gi|340795348|ref|YP_004760811.1| 50S ribosomal protein L4 [Corynebacterium variabile DSM 44702]
gi|340535258|gb|AEK37738.1| 50S ribosomal protein L4 [Corynebacterium variabile DSM 44702]
Length = 216
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V G + L +FDV ++H+VV QLA ++QGTH+TKT +V G
Sbjct: 3 NLTLNVHTADGSTNGTVELPASIFDVEPSVPLMHQVVVAQLAAKRQGTHATKTRGDVRGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
GKKP+RQKGTGRAR G+ R P
Sbjct: 63 GKKPFRQKGTGRARQGSTRAPH 84
>gi|227512865|ref|ZP_03942914.1| 50S ribosomal protein L4 [Lactobacillus buchneri ATCC 11577]
gi|227522993|ref|ZP_03953042.1| 50S ribosomal protein L4 [Lactobacillus hilgardii ATCC 8290]
gi|227083865|gb|EEI19177.1| 50S ribosomal protein L4 [Lactobacillus buchneri ATCC 11577]
gi|227089811|gb|EEI25123.1| 50S ribosomal protein L4 [Lactobacillus hilgardii ATCC 8290]
Length = 207
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 44/68 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L D+F + +++ V Q A R+QGTHS K S V G GKKPWRQKGTGRAR
Sbjct: 15 GTVSLNDDIFGIEPNNNVVFDAVVMQRASRRQGTHSVKNRSAVRGGGKKPWRQKGTGRAR 74
Query: 172 HGTLRGPQ 179
G++R PQ
Sbjct: 75 QGSIRSPQ 82
>gi|212716610|ref|ZP_03324738.1| hypothetical protein BIFCAT_01539 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212660314|gb|EEB20889.1| hypothetical protein BIFCAT_01539 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 221
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 6/91 (6%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVF-----DVPIRKDIIHRVVRWQLAKRQQGTHSTKTIS 152
++ + VT+ G + ++F +V R +IH+VV Q A +QGTH+TKT
Sbjct: 3 NVTLNVTDNQGNATGTVEAPAEIFGFSAEEVQSRIPLIHQVVVAQRAAARQGTHATKTRG 62
Query: 153 EVSGTGKKPWRQKGTGRARHGTLRGPQGWYY 183
VSG G+KPW+QKGTGRAR G++R PQ WY+
Sbjct: 63 MVSGGGRKPWKQKGTGRARQGSIRAPQ-WYH 92
>gi|378550977|ref|ZP_09826193.1| hypothetical protein CCH26_12849 [Citricoccus sp. CH26A]
Length = 214
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FDV ++H+VV QLA +QGTH K EVSG G+KP++QKGTGRAR G++
Sbjct: 17 LPAEIFDVQSNVPLMHQVVVAQLAAARQGTHKVKRRGEVSGAGRKPFKQKGTGRARQGSI 76
Query: 176 RGPQ 179
R PQ
Sbjct: 77 RAPQ 80
>gi|315497974|ref|YP_004086778.1| 50S ribosomal protein L4/l1e [Asticcacaulis excentricus CB 48]
gi|315415986|gb|ADU12627.1| ribosomal protein L4/L1e [Asticcacaulis excentricus CB 48]
Length = 210
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
+ V N G + ++ VF + IR DI+ RVV WQLAKR+ GTH +T +E S TGK
Sbjct: 3 LDVITLDNGTAGSVDVSDAVFGLEEIRNDILARVVNWQLAKRRAGTHKVQTRNENSRTGK 62
Query: 160 KPWRQKGTGRARHGTLRGPQ 179
K ++QKG+G ARHG+ R PQ
Sbjct: 63 KMYKQKGSGGARHGSRRAPQ 82
>gi|149915845|ref|ZP_01904369.1| 50S ribosomal protein L4 [Roseobacter sp. AzwK-3b]
gi|149810168|gb|EDM70014.1| 50S ribosomal protein L4 [Roseobacter sp. AzwK-3b]
Length = 205
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L D+F + R DI+HRVVRWQ K QQGTH KT SE S + KK +RQKGTG AR
Sbjct: 14 GSVDLGEDIFGLDPRADILHRVVRWQRNKAQQGTHKVKTRSETSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGP---QGWYYNA---RSKAQKPCYKVEQEG 200
HG P +G Y RS A KV G
Sbjct: 74 HGDRNAPIFRKGGIYKGPTPRSHAHDLPKKVRMLG 108
>gi|68536922|ref|YP_251627.1| 50S ribosomal protein L4 [Corynebacterium jeikeium K411]
gi|109893588|sp|Q4JT48.1|RL4_CORJK RecName: Full=50S ribosomal protein L4
gi|68264521|emb|CAI38009.1| 50S ribosomal protein L4 [Corynebacterium jeikeium K411]
Length = 217
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V + G + L +FD ++H+VV QLA ++QGTH+TKT VSG
Sbjct: 3 NLKLDVHTADGKTNGTVELPASIFDAEASVALMHQVVTAQLAAKRQGTHATKTRGMVSGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KP+RQKGTGRAR G++R P
Sbjct: 63 GRKPFRQKGTGRARQGSIRAPH 84
>gi|294630894|ref|ZP_06709454.1| 50S ribosomal protein L4/L1 [Streptomyces sp. e14]
gi|292834227|gb|EFF92576.1| 50S ribosomal protein L4/L1 [Streptomyces sp. e14]
Length = 218
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 109 EDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGT 167
E G + L ++F V + +IH+VV QLA +QGTH TKT EV G GKKP+RQKGT
Sbjct: 12 EKAGTVELPAEIFGVEKVSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKKPYRQKGT 71
Query: 168 GRARHGTLRGPQ 179
GRAR G+ R PQ
Sbjct: 72 GRARQGSTRAPQ 83
>gi|352518454|ref|YP_004887771.1| 50S ribosomal protein L4 [Tetragenococcus halophilus NBRC 12172]
gi|348602561|dbj|BAK95607.1| 50S ribosomal protein L4 [Tetragenococcus halophilus NBRC 12172]
Length = 207
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P F +D G + L ++F + + ++ + Q A +QGTH+ K S VSG
Sbjct: 1 MPNVALFKQDGSQNGEVTLNEEIFGIEPNESVVFDAITMQRASLRQGTHAVKNRSAVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
GKKPWRQKGTGRAR GT+R PQ
Sbjct: 61 GKKPWRQKGTGRARQGTIRAPQ 82
>gi|331699175|ref|YP_004335414.1| 50S ribosomal protein L4/L1e [Pseudonocardia dioxanivorans CB1190]
gi|326953864|gb|AEA27561.1| ribosomal protein L4/L1e [Pseudonocardia dioxanivorans CB1190]
Length = 308
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 51/79 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G + L G VFDV ++H+VV Q A +QGTH TKT EV G G+K
Sbjct: 4 VDVKNAAGEKDGSVELPGHVFDVTANIPLMHQVVVAQQAAARQGTHDTKTRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G++R PQ
Sbjct: 64 PYRQKGTGRARQGSVRAPQ 82
>gi|299470351|emb|CBN78400.1| 50S ribosomal protein L4P [Ectocarpus siliculosus]
Length = 307
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
LA VF VP+R+D++H VVRWQLA+R++G TK I E+SG+G+K QKG G AR G
Sbjct: 116 LAPSVFGVPVRRDVVHEVVRWQLARRRKGNGQTKRIGEISGSGRKVRPQKGGGVARAGHS 175
Query: 176 RGPQGWYYNARSKAQKP 192
R P ++ +KA P
Sbjct: 176 RPP---HWRGGAKAHGP 189
>gi|225717040|gb|ACO14366.1| Mitochondrial 39S ribosomal protein L4 [Esox lucius]
Length = 302
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 108 NEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGT 167
+E G + L D+F VP R DI+H V WQ + ++ TK SEV G G+KPW+QKG+
Sbjct: 83 SEPLGLVDLHPDIFAVPARVDILHDVEMWQRSFKRISYAHTKVRSEVRGGGRKPWKQKGS 142
Query: 168 GRARHGTLRGP 178
GRARHG++R P
Sbjct: 143 GRARHGSIRSP 153
>gi|288818163|ref|YP_003432511.1| ribosomal protein L4 [Hydrogenobacter thermophilus TK-6]
gi|384128927|ref|YP_005511540.1| 50S ribosomal protein L4 [Hydrogenobacter thermophilus TK-6]
gi|288787563|dbj|BAI69310.1| ribosomal protein L4 [Hydrogenobacter thermophilus TK-6]
gi|308751764|gb|ADO45247.1| ribosomal protein L4/L1e [Hydrogenobacter thermophilus TK-6]
Length = 199
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 70/130 (53%), Gaps = 21/130 (16%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G M L DVF+V +++ I+ V++WQLA R+QGTHSTKT E+S +G+K QKGTG AR
Sbjct: 4 GDMELRDDVFNVEVKRHILWEVIKWQLACRRQGTHSTKTRGELSYSGRKLLPQKGTGNAR 63
Query: 172 HGTLRG--------------PQGWYYNARSKAQKPCYKV-----EQEGAAAWVEDCSICS 212
HG RG P +YY+ K +K K+ QEG + +I
Sbjct: 64 HGD-RGANIFVGGGVAHGPRPTDYYYSLPKKVRKLGLKMALSSKAQEGKMLLFDSINIGD 122
Query: 213 SSR-RKALGF 221
+ +KA+ F
Sbjct: 123 VPKTKKAIEF 132
>gi|116515258|ref|YP_802887.1| 50S ribosomal protein L4 [Buchnera aphidicola BCc]
gi|122285346|sp|Q057A5.1|RL4_BUCCC RecName: Full=50S ribosomal protein L4
gi|58384691|gb|AAW72706.1| 50S ribosomal protein L4 [Buchnera aphidicola (Cinara cedri)]
gi|116257112|gb|ABJ90794.1| 50S ribosomal protein L4 [Buchnera aphidicola BCc]
Length = 201
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%)
Query: 106 FFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQK 165
F + ++ +F+ + ++H+++ LA+R+QG+ + K+ SEVSG+GKKPWRQK
Sbjct: 4 MFQDTNEIYNISESIFNKVFNEPLVHQIIVCYLARRRQGSKAQKSRSEVSGSGKKPWRQK 63
Query: 166 GTGRARHGTLRGP 178
GTGRAR G+LR P
Sbjct: 64 GTGRARSGSLRSP 76
>gi|412987813|emb|CCO19209.1| 50S ribosomal protein L4 [Bathycoccus prasinos]
Length = 340
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 57/98 (58%), Gaps = 8/98 (8%)
Query: 90 DITIGLHQDLVIPV---TNFFNEDKGF----MVLAGDVFDVPIRKDIIHRVVRWQLA-KR 141
D+ G +D +P+ + E + +VL G FDVPIR DI HR VRWQLA KR
Sbjct: 99 DVEQGEMRDKTVPIHASAHIIEEKESSFDEKIVLPGRHFDVPIRIDIAHRCVRWQLARKR 158
Query: 142 QQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
T TK+ EVSGT +K QKG GRAR G+LR PQ
Sbjct: 159 GVSTAKTKSRGEVSGTTRKARPQKGGGRARVGSLRAPQ 196
>gi|291537925|emb|CBL11036.1| LSU ribosomal protein L4P [Roseburia intestinalis XB6B4]
Length = 198
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L VF V + + ++H V QLA +QGT KT SEV G G+KPWRQKGTG AR
Sbjct: 7 GSLELNDAVFGVEVNEHLVHMAVLQQLANNRQGTQKAKTRSEVRGGGRKPWRQKGTGHAR 66
Query: 172 HGTLRGPQGWYY 183
G+ R PQ W +
Sbjct: 67 QGSTRAPQ-WTH 77
>gi|227502655|ref|ZP_03932704.1| 50S ribosomal protein L4 [Corynebacterium accolens ATCC 49725]
gi|227076385|gb|EEI14348.1| 50S ribosomal protein L4 [Corynebacterium accolens ATCC 49725]
Length = 217
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 47/69 (68%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
G + L ++FD ++H+VV QLA +QGTH+TKT +V G G+KP+RQKGTGRA
Sbjct: 16 NGSVDLPAEIFDTEASVALMHQVVNAQLAAARQGTHATKTRGDVRGGGRKPFRQKGTGRA 75
Query: 171 RHGTLRGPQ 179
R G++R P
Sbjct: 76 RQGSIRAPH 84
>gi|376298177|ref|YP_005169407.1| 50S ribosomal protein L4 [Desulfovibrio desulfuricans ND132]
gi|323460739|gb|EGB16604.1| ribosomal protein L4/L1e [Desulfovibrio desulfuricans ND132]
Length = 206
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V + N G LA +VF+V I +I+++VVR Q A ++QGTH+TK + +G G+K
Sbjct: 4 IQVVDQNNTKVGDFELAPEVFEVEIMPEILNQVVRAQRASQRQGTHATKNRALKAGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRAR G+ P
Sbjct: 64 PWRQKGTGRARAGSSNSP 81
>gi|306835220|ref|ZP_07468254.1| ribosomal protein L4/L1 family protein [Corynebacterium accolens
ATCC 49726]
gi|304568900|gb|EFM44431.1| ribosomal protein L4/L1 family protein [Corynebacterium accolens
ATCC 49726]
Length = 217
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 47/69 (68%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
G + L ++FD ++H+VV QLA +QGTH+TKT +V G G+KP+RQKGTGRA
Sbjct: 16 NGSVDLPAEIFDTEASVALMHQVVNAQLAAARQGTHATKTRGDVRGGGRKPFRQKGTGRA 75
Query: 171 RHGTLRGPQ 179
R G++R P
Sbjct: 76 RQGSIRAPH 84
>gi|162446958|ref|YP_001620090.1| 50S ribosomal protein L4 [Acholeplasma laidlawii PG-8A]
gi|189029489|sp|A9NED4.1|RL4_ACHLI RecName: Full=50S ribosomal protein L4
gi|161985065|gb|ABX80714.1| large subunit ribosomal protein L4 [Acholeplasma laidlawii PG-8A]
Length = 207
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P N FN E + L +F + + +++ VV Q A +QGT TKT +EV G
Sbjct: 1 MPTLNLFNQAGEKISEVALNDAIFGITPNQQVLYDVVNAQRAALRQGTAKTKTRAEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
GKKPWRQKGTGRAR G++R PQ
Sbjct: 61 GKKPWRQKGTGRARQGSIRSPQ 82
>gi|206891119|ref|YP_002249244.1| ribosomal protein L4/L1 family [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|226731439|sp|B5YG46.1|RL4_THEYD RecName: Full=50S ribosomal protein L4
gi|206743057|gb|ACI22114.1| ribosomal protein L4/L1 family [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 210
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGP 178
VF+ + ++H V +A ++QGTH TKT SEVSG GKKPWRQK TGRARHG++R P
Sbjct: 23 VFNNSASESVVHTAVVAYMANQRQGTHCTKTRSEVSGGGKKPWRQKHTGRARHGSIRSP 81
>gi|357390093|ref|YP_004904933.1| 50S ribosomal protein L4 [Kitasatospora setae KM-6054]
gi|311896569|dbj|BAJ28977.1| putative ribosomal protein L4 [Kitasatospora setae KM-6054]
Length = 225
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 45/68 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD + ++H+VV QLA +QGTH K EV G GKKP+RQKGTGRAR
Sbjct: 15 GSLELPAEIFDAKVSVPLMHQVVVAQLAAARQGTHKVKRRGEVRGGGKKPYRQKGTGRAR 74
Query: 172 HGTLRGPQ 179
G+ R PQ
Sbjct: 75 QGSTRAPQ 82
>gi|421239799|ref|ZP_15696352.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2080913]
gi|395610673|gb|EJG70749.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2080913]
Length = 207
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 48/71 (67%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL+ VF + K ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGQVVLSDAVFGIEPNKSVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRSPQ 82
>gi|375310806|ref|ZP_09776071.1| 50S ribosomal protein L4/L1e [Paenibacillus sp. Aloe-11]
gi|390456379|ref|ZP_10241907.1| 50S ribosomal protein L4 [Paenibacillus peoriae KCTC 3763]
gi|375077174|gb|EHS55417.1| 50S ribosomal protein L4/L1e [Paenibacillus sp. Aloe-11]
Length = 207
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 47/79 (59%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N G + L VF + K ++H V QLA +QGTH K SEV G G+K
Sbjct: 4 VALLNISGSQVGEIELNDAVFGIEPNKHVLHDAVVMQLASLRQGTHKVKGRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PW+QKGTGRAR G++R PQ
Sbjct: 64 PWKQKGTGRARQGSIRAPQ 82
>gi|365845085|ref|ZP_09385883.1| 50S ribosomal protein L4 [Flavonifractor plautii ATCC 29863]
gi|364562009|gb|EHM39881.1| 50S ribosomal protein L4 [Flavonifractor plautii ATCC 29863]
Length = 206
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N G + L+ VF + + ++H VV+ LA +QGT S T +EVSG G KPW
Sbjct: 6 LVNMAGTQVGEVELSEAVFGIEPNQTVVHEVVKNHLANCRQGTQSALTRAEVSGGGIKPW 65
Query: 163 RQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
RQKGTGRAR G+ R PQ W + A KP
Sbjct: 66 RQKGTGRARQGSTRAPQ-WTHGGIVFAPKP 94
>gi|373116805|ref|ZP_09530956.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 7_1_58FAA]
gi|371668881|gb|EHO33985.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 7_1_58FAA]
Length = 206
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N G + L+ VF + + ++H VV+ LA +QGT S T +EVSG G KPW
Sbjct: 6 LVNMAGTQVGEVELSEAVFGIEPNQTVVHEVVKNHLANCRQGTQSALTRAEVSGGGIKPW 65
Query: 163 RQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
RQKGTGRAR G+ R PQ W + A KP
Sbjct: 66 RQKGTGRARQGSTRAPQ-WTHGGIVFAPKP 94
>gi|312115688|ref|YP_004013284.1| 50S ribosomal protein L4 [Rhodomicrobium vannielii ATCC 17100]
gi|311220817|gb|ADP72185.1| ribosomal protein L4/L1e [Rhodomicrobium vannielii ATCC 17100]
Length = 206
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 48/70 (68%)
Query: 110 DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGR 169
+ G + L VF + R DI+ R+VR+QL+KRQ GTH K SEV+G KK ++QKGTG+
Sbjct: 12 NAGSVELDDAVFALEPRTDILQRMVRYQLSKRQAGTHKAKARSEVNGPNKKIYKQKGTGQ 71
Query: 170 ARHGTLRGPQ 179
ARHG + PQ
Sbjct: 72 ARHGNDKPPQ 81
>gi|406900297|gb|EKD43310.1| 50S ribosomal protein L4 [uncultured bacterium]
Length = 209
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I V N ++ G M L+ +VF V I+ +++H+V Q +++ TK EVSG G
Sbjct: 1 MKIKVYNLAGKETGEMELSDEVFGVKIKPELVHQVFVQQTNNQREPWADTKNRGEVSGGG 60
Query: 159 KKPWRQKGTGRARHGTLRGP 178
KKPW+QKGTGRARHG++R P
Sbjct: 61 KKPWQQKGTGRARHGSIRSP 80
>gi|340030726|ref|ZP_08666789.1| 50S ribosomal protein L4 [Paracoccus sp. TRP]
Length = 206
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ D+F + R DI+HRVVRWQ AK Q GTHS S+VS + KK +RQKGTG AR
Sbjct: 14 GNIELSDDIFGLEPRADILHRVVRWQRAKAQAGTHSVLGKSDVSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGP 178
HG+ + P
Sbjct: 74 HGSRKAP 80
>gi|257125037|ref|YP_003163151.1| 50S ribosomal protein L4 [Leptotrichia buccalis C-1013-b]
gi|257048976|gb|ACV38160.1| ribosomal protein L4/L1e [Leptotrichia buccalis C-1013-b]
Length = 214
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+PV N + D G + + DVF + K ++H V+ +LA+ +QG+ STKT +EV G
Sbjct: 1 MPVLNIYKLDGSQAGTIEVNNDVFGIEPNKHVMHEVLVAELAEARQGSASTKTRAEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KP+RQKGTGRAR G+ R P
Sbjct: 61 GRKPFRQKGTGRARQGSTRAPH 82
>gi|443625140|ref|ZP_21109591.1| putative 50S ribosomal protein L4 [Streptomyces viridochromogenes
Tue57]
gi|443341403|gb|ELS55594.1| putative 50S ribosomal protein L4 [Streptomyces viridochromogenes
Tue57]
Length = 218
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 109 EDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGT 167
E G + L ++F V I ++H+VV QLA +QGTH TKT EV G GKKP+RQKGT
Sbjct: 12 EKAGSVELPAEIFGVEKISVPLLHQVVVAQLAAARQGTHKTKTRGEVRGGGKKPYRQKGT 71
Query: 168 GRARHGTLRGPQ 179
GRAR G+ R PQ
Sbjct: 72 GRARQGSTRAPQ 83
>gi|328787688|ref|XP_001120958.2| PREDICTED: 39S ribosomal protein L4, mitochondrial [Apis mellifera]
Length = 280
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 42/67 (62%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G M L DV+ R DIIH+ V+WQ R TK SEV G GKKPWRQKG GRAR
Sbjct: 66 GLMFLHPDVYGTAPRIDIIHQNVQWQKMYRFVSYAHTKVRSEVRGGGKKPWRQKGLGRAR 125
Query: 172 HGTLRGP 178
HG++R P
Sbjct: 126 HGSIRSP 132
>gi|212637955|ref|YP_002314475.1| 50S ribosomal protein L4 [Anoxybacillus flavithermus WK1]
gi|226730612|sp|B7GJ68.1|RL4_ANOFW RecName: Full=50S ribosomal protein L4
gi|212559435|gb|ACJ32490.1| Ribosomal protein L4 [Anoxybacillus flavithermus WK1]
Length = 207
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N E+ G + L VF + K ++ V Q A +QGTH TK +EVSG
Sbjct: 1 MPKVALYNQNGENIGEIELNDAVFGIEPNKHVLFEAVIMQRASLRQGTHKTKNRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQ 82
>gi|317575759|ref|NP_001187653.1| mitochondrial 39S ribosomal protein l4 [Ictalurus punctatus]
gi|308323607|gb|ADO28939.1| mitochondrial 39S ribosomal protein l4 [Ictalurus punctatus]
Length = 312
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 23/145 (15%)
Query: 57 LASRKFSTTILTPDSSEGAFPSDLLLKKTVLTP-------------------DITIGLH- 96
+ +R ST +++ S E A PS+L L ++ D + H
Sbjct: 19 VCTRGISTRLISSLSGESALPSNLRLPANLIGAPRQKAAVPTGSELPVVRRCDADVPAHL 78
Query: 97 ---QDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISE 153
Q + + ++ +E G + L DVF VP+R DI+H V WQ ++ K+ +E
Sbjct: 79 APVQTWLHSLGSYESEPLGVVDLHPDVFSVPVRLDILHAVEVWQRNFKRISNAKVKSRAE 138
Query: 154 VSGTGKKPWRQKGTGRARHGTLRGP 178
V G G KPW+QKG+GRARHG++R P
Sbjct: 139 VRGGGGKPWKQKGSGRARHGSIRSP 163
>gi|344923959|ref|ZP_08777420.1| 50S ribosomal protein L4 [Candidatus Odyssella thessalonicensis
L13]
Length = 207
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N + G + L ++F + R DI+ RV+ WQLAKR+ G H TK + +V G+ +K
Sbjct: 3 IDVINIEAKKAGDIELNPEIFGLQPRVDILSRVIEWQLAKRRSGNHKTKEVGDVRGSTRK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
+RQKGTG ARHG+ R Q
Sbjct: 63 IYRQKGTGNARHGSKRQVQ 81
>gi|255324737|ref|ZP_05365851.1| ribosomal protein L4/L1 family protein [Corynebacterium
tuberculostearicum SK141]
gi|311740076|ref|ZP_07713910.1| ribosomal protein L4/L1 family protein [Corynebacterium
pseudogenitalium ATCC 33035]
gi|255298212|gb|EET77515.1| ribosomal protein L4/L1 family protein [Corynebacterium
tuberculostearicum SK141]
gi|311305149|gb|EFQ81218.1| ribosomal protein L4/L1 family protein [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 217
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 47/69 (68%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
G + L ++FD ++H+VV QLA +QGTH+TKT +V G G+KP+RQKGTGRA
Sbjct: 16 NGSVDLPAEIFDTEASIALMHQVVNAQLAAARQGTHATKTRGDVRGGGRKPFRQKGTGRA 75
Query: 171 RHGTLRGPQ 179
R G++R P
Sbjct: 76 RQGSIRAPH 84
>gi|433447313|ref|ZP_20410910.1| 50S ribosomal protein L4 [Anoxybacillus flavithermus TNO-09.006]
gi|431999977|gb|ELK20884.1| 50S ribosomal protein L4 [Anoxybacillus flavithermus TNO-09.006]
Length = 207
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N E+ G + L VF + K ++ V Q A +QGTH TK +EVSG
Sbjct: 1 MPKVALYNQNGENIGEIELNDAVFGIEPNKHVLFEAVIMQRASLRQGTHKTKNRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQ 82
>gi|297717844|gb|ADI50065.1| LSU ribosomal protein L4p [Candidatus Odyssella thessalonicensis
L13]
Length = 206
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N + G + L ++F + R DI+ RV+ WQLAKR+ G H TK + +V G+ +K
Sbjct: 3 IDVINIEAKKAGDIELNPEIFGLQPRVDILSRVIEWQLAKRRSGNHKTKEVGDVRGSTRK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
+RQKGTG ARHG+ R Q
Sbjct: 63 IYRQKGTGNARHGSKRQVQ 81
>gi|304438906|ref|ZP_07398829.1| ribosomal protein L4/L1 family protein [Peptoniphilus duerdenii
ATCC BAA-1640]
gi|304372572|gb|EFM26155.1| ribosomal protein L4/L1 family protein [Peptoniphilus duerdenii
ATCC BAA-1640]
Length = 229
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 125 IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQGWYYN 184
I + ++ VV+ QLA ++QGTH+ KT +EV G G+KPWRQKGTGRAR G++R PQ W
Sbjct: 50 INRHAVYLVVKNQLANKRQGTHACKTRAEVRGGGRKPWRQKGTGRARQGSIRSPQ-WRKG 108
Query: 185 ARSKAQKP 192
A+KP
Sbjct: 109 GIVFAKKP 116
>gi|260787918|ref|XP_002588998.1| hypothetical protein BRAFLDRAFT_124913 [Branchiostoma floridae]
gi|229274171|gb|EEN45009.1| hypothetical protein BRAFLDRAFT_124913 [Branchiostoma floridae]
Length = 264
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 108 NEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGT 167
+E G + L DVF R DI+HR VRWQ R+ +T +E+ G G+KPW QKGT
Sbjct: 38 DEKLGMVELHPDVFATHPRMDILHRCVRWQYLYRKINYDFARTRAEMRGGGRKPWPQKGT 97
Query: 168 GRARHGTLRGPQGWYYNARSKAQKPCYKVEQ 198
GRARHG++R P W+ + + Y Q
Sbjct: 98 GRARHGSIRSPL-WHMGGKCHGPRGPYSYYQ 127
>gi|260807182|ref|XP_002598388.1| hypothetical protein BRAFLDRAFT_128122 [Branchiostoma floridae]
gi|229283660|gb|EEN54400.1| hypothetical protein BRAFLDRAFT_128122 [Branchiostoma floridae]
Length = 264
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 108 NEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGT 167
+E G + L DVF R DI+HR VRWQ R+ +T +E+ G G+KPW QKGT
Sbjct: 38 DEKLGMVELHPDVFATHPRMDILHRCVRWQYLYRKINYDFARTRAEMRGGGRKPWPQKGT 97
Query: 168 GRARHGTLRGPQGWYYNARSKAQKPCYKVEQ 198
GRARHG++R P W+ + + Y Q
Sbjct: 98 GRARHGSIRSPL-WHMGGKCHGPRGPYSYYQ 127
>gi|227505215|ref|ZP_03935264.1| 50S ribosomal protein L4 [Corynebacterium striatum ATCC 6940]
gi|227198189|gb|EEI78237.1| 50S ribosomal protein L4 [Corynebacterium striatum ATCC 6940]
Length = 220
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V + G + L ++FD ++H+VV QLA +QGTH KT EV G
Sbjct: 3 NLKLDVQTAEGKTNGSVELPAEIFDTEASIALMHQVVNAQLAAARQGTHKAKTRGEVRGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KP+RQKGTGRAR G++R P
Sbjct: 63 GRKPFRQKGTGRARQGSIRAPH 84
>gi|420151467|ref|ZP_14658574.1| 50S ribosomal protein L4 [Actinomyces massiliensis F0489]
gi|394766786|gb|EJF47777.1| 50S ribosomal protein L4 [Actinomyces massiliensis F0489]
Length = 218
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + + + G + L ++FDV ++H+VV QLA +QGTH+TKT V G G
Sbjct: 9 LSVAIVDSKGSKTGTVELPAEIFDVEPNIPLMHQVVVAQLAAIRQGTHATKTRGMVRGGG 68
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
+KP+RQKGTGRAR G+ R PQ
Sbjct: 69 RKPYRQKGTGRARQGSTRAPQ 89
>gi|414159413|ref|ZP_11415699.1| 50S ribosomal protein L4 [Staphylococcus simulans ACS-120-V-Sch1]
gi|410884415|gb|EKS32241.1| 50S ribosomal protein L4 [Staphylococcus simulans ACS-120-V-Sch1]
Length = 207
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 44/68 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ VF + KD++ + Q A +QGTHS K S V G G+KPWRQKGTGRAR
Sbjct: 15 GSVELSDAVFAIEPNKDVLFEAINLQRASLRQGTHSVKNRSAVRGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQ 179
GT+R PQ
Sbjct: 75 QGTIRAPQ 82
>gi|288554726|ref|YP_003426661.1| 50S ribosomal protein L4 [Bacillus pseudofirmus OF4]
gi|288545886|gb|ADC49769.1| 50S ribosomal protein L4 [Bacillus pseudofirmus OF4]
Length = 207
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN+ G + L+ +F + + ++H V Q A +QGTH TK SEV G
Sbjct: 1 MPKVAVFNQAGSQVGDIELSDSIFGIEPNQSVLHDAVVMQQASLRQGTHKTKGRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQ 82
>gi|409357874|ref|ZP_11236242.1| 50S ribosomal protein L4 [Dietzia alimentaria 72]
Length = 226
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 88 TPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHS 147
T + T+ L D+ P + G + L +VF V ++H+VV QLA +QGTHS
Sbjct: 3 TTENTVNLKLDVRTPA----GKTDGSVELPAEVFGVEPNLPLMHQVVVAQLAAARQGTHS 58
Query: 148 TKTISEVSGTGKKPWRQKGTGRARHGTLRGP 178
TKT EV G G+KP+RQKGTGRAR G+ R P
Sbjct: 59 TKTRGEVRGGGRKPFRQKGTGRARQGSTRAP 89
>gi|380750078|gb|AFE48780.1| 50S ribosomal protein L4 [Staphylococcus pettenkoferi]
Length = 207
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 43/68 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L VF + D++ + Q A +QGTHS K SEV G G+KPWRQKGTGRAR
Sbjct: 15 GSVELNDAVFAIEPNNDVLFEAINLQRASLRQGTHSVKNRSEVRGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQ 179
GT+R PQ
Sbjct: 75 QGTIRAPQ 82
>gi|312200019|ref|YP_004020080.1| 50S ribosomal protein L4 [Frankia sp. EuI1c]
gi|311231355|gb|ADP84210.1| ribosomal protein L4/L1e [Frankia sp. EuI1c]
Length = 234
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 49/70 (70%)
Query: 110 DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGR 169
+ G L G++FDV + +IH+VV Q A +QGTH TKT EV G GKKP+RQKGTGR
Sbjct: 33 EGGTAELPGEIFDVQVNVPLIHQVVVAQQAAARQGTHDTKTRGEVRGGGKKPYRQKGTGR 92
Query: 170 ARHGTLRGPQ 179
AR G+LR PQ
Sbjct: 93 ARQGSLRAPQ 102
>gi|256831828|ref|YP_003160555.1| 50S ribosomal protein L4 [Jonesia denitrificans DSM 20603]
gi|256685359|gb|ACV08252.1| ribosomal protein L4/L1e [Jonesia denitrificans DSM 20603]
Length = 228
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ ++L + + + G VL ++FDV + +IH+VV Q A +QGTH+TKT ++V
Sbjct: 1 MAENLTVDILDATGNKTGDAVLPAEIFDVALNVPLIHQVVVAQQAAARQGTHATKTRAQV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
SG G+KP++QKGTGRAR G+ R PQ
Sbjct: 61 SGGGRKPYKQKGTGRARQGSTRAPQ 85
>gi|189424411|ref|YP_001951588.1| 50S ribosomal protein L4 [Geobacter lovleyi SZ]
gi|226730669|sp|B3E7T6.1|RL4_GEOLS RecName: Full=50S ribosomal protein L4
gi|189420670|gb|ACD95068.1| ribosomal protein L4/L1e [Geobacter lovleyi SZ]
Length = 206
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + N E G + L +F +++ +IH+ ++ QLA R+ GT TKT +EVSG GKK
Sbjct: 4 IALYNMNREKIGEVALDEQIFAAEVKEPLIHQALKVQLANRRAGTVKTKTRAEVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P++QKGTG AR G R PQ
Sbjct: 64 PFKQKGTGNARQGCSRAPQ 82
>gi|366052601|ref|ZP_09450323.1| 50S ribosomal protein L4 [Lactobacillus suebicus KCTC 3549]
Length = 208
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 45/68 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L DVF + ++ I+ V Q A +QGTH+ K S VSG GKKPWRQKGTGRAR
Sbjct: 16 GTVDLNADVFGIEPNQNAIYDAVLRQRASLRQGTHAVKNRSAVSGGGKKPWRQKGTGRAR 75
Query: 172 HGTLRGPQ 179
G++R PQ
Sbjct: 76 QGSIRSPQ 83
>gi|335040796|ref|ZP_08533918.1| ribosomal protein L4/L1e [Caldalkalibacillus thermarum TA2.A1]
gi|334179371|gb|EGL82014.1| ribosomal protein L4/L1e [Caldalkalibacillus thermarum TA2.A1]
Length = 207
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N++ G + LA VF + + ++H V Q A + GTH+TK + V G
Sbjct: 1 MPKVTLYNQNGSIVGEIELADSVFGIEPNQYVLHDAVVMQRASMRAGTHATKNRAAVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRARHG++R PQ
Sbjct: 61 GRKPWRQKGTGRARHGSIRAPQ 82
>gi|418323019|ref|ZP_12934320.1| 50S ribosomal protein L4 [Staphylococcus pettenkoferi VCU012]
gi|365230673|gb|EHM71759.1| 50S ribosomal protein L4 [Staphylococcus pettenkoferi VCU012]
Length = 207
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 43/68 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L VF + D++ + Q A +QGTHS K SEV G G+KPWRQKGTGRAR
Sbjct: 15 GSVELNDAVFAIEPNNDVLFEAINLQRASLRQGTHSVKNRSEVRGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQ 179
GT+R PQ
Sbjct: 75 QGTIRAPQ 82
>gi|358066907|ref|ZP_09153396.1| 50S ribosomal protein L4 [Johnsonella ignava ATCC 51276]
gi|356694946|gb|EHI56598.1| 50S ribosomal protein L4 [Johnsonella ignava ATCC 51276]
Length = 206
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + ++ G M L +F + + + I+H V LA ++QGT KT EV G G+K
Sbjct: 4 VSVYDIEGKEVGDMELNDAIFGIEVNEHIVHMAVVAHLANKRQGTQKAKTRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTG AR G++R PQ
Sbjct: 64 PWRQKGTGHARQGSIRSPQ 82
>gi|403382869|ref|ZP_10924926.1| 50S ribosomal protein L4 [Paenibacillus sp. JC66]
Length = 207
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E G + L+ VF + K ++H V Q A +QGTH K SEV G G+K
Sbjct: 4 VALYNISGEQVGELELSEAVFGIEPNKHVLHDAVVMQQASLRQGTHKVKGRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PW+QKGTGRAR G++R PQ
Sbjct: 64 PWKQKGTGRARQGSIRSPQ 82
>gi|260891593|ref|ZP_05902856.1| hypothetical protein GCWU000323_02808 [Leptotrichia hofstadii
F0254]
gi|260858701|gb|EEX73201.1| ribosomal protein L4/L1 family protein [Leptotrichia hofstadii
F0254]
Length = 214
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+PV N + D G + + DVF + K ++H V+ +LA+ +QG+ STKT +EV G
Sbjct: 1 MPVLNIYKLDGSQAGTIEVNNDVFGIEPNKHVMHEVLVAELAEARQGSASTKTRAEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KP+RQKGTGRAR G+ R P
Sbjct: 61 GRKPFRQKGTGRARQGSTRAPH 82
>gi|260655382|ref|ZP_05860870.1| ribosomal protein L4/L1 family protein [Jonquetella anthropi E3_33
E1]
gi|424845194|ref|ZP_18269805.1| 50S ribosomal protein L4, bacterial/organelle [Jonquetella anthropi
DSM 22815]
gi|260629830|gb|EEX48024.1| ribosomal protein L4/L1 family protein [Jonquetella anthropi E3_33
E1]
gi|363986632|gb|EHM13462.1| 50S ribosomal protein L4, bacterial/organelle [Jonquetella anthropi
DSM 22815]
Length = 207
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 47/79 (59%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
VI + NF E G + L+ VF VP IH+VV Q A +QGT K EV G G+
Sbjct: 3 VIKILNFAGEVVGDLELSDAVFGVPFHSSAIHQVVVAQQANARQGTACAKDRGEVRGGGR 62
Query: 160 KPWRQKGTGRARHGTLRGP 178
KPWRQK TGRAR G++R P
Sbjct: 63 KPWRQKHTGRARAGSIRSP 81
>gi|336322753|ref|YP_004602720.1| 50S ribosomal protein L4 [Flexistipes sinusarabici DSM 4947]
gi|336106334|gb|AEI14152.1| ribosomal protein L4/L1e [Flexistipes sinusarabici DSM 4947]
Length = 208
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
++ + D P + ++H VV+ QLA R+ GTH+TK + +SG GKKPWRQKGTGRAR G+
Sbjct: 19 ISEQLMDYPEKPWLVHEVVKMQLAGRRAGTHATKNRANISGGGKKPWRQKGTGRARAGSS 78
Query: 176 RGP 178
R P
Sbjct: 79 RSP 81
>gi|365926342|ref|ZP_09449105.1| 50S ribosomal protein L4 [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|420265979|ref|ZP_14768491.1| 50S ribosomal protein L4 [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|394426842|gb|EJE99634.1| 50S ribosomal protein L4 [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 207
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P F +D G + L ++F + +++ V Q A +QGTH+ K S+VSG
Sbjct: 1 MPKVTLFKQDGSKNGEVELNENIFGIEPNDNVVFDAVIMQRASLRQGTHAVKNRSDVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
GKKPWRQKGTGRAR G++R PQ
Sbjct: 61 GKKPWRQKGTGRARQGSIRSPQ 82
>gi|312109262|ref|YP_003987578.1| 50S ribosomal protein L4/L1e [Geobacillus sp. Y4.1MC1]
gi|336233656|ref|YP_004586272.1| 50S ribosomal protein L4 [Geobacillus thermoglucosidasius C56-YS93]
gi|423718377|ref|ZP_17692559.1| 50S ribosomal protein L4/L1e [Geobacillus thermoglucosidans
TNO-09.020]
gi|311214363|gb|ADP72967.1| ribosomal protein L4/L1e [Geobacillus sp. Y4.1MC1]
gi|335360511|gb|AEH46191.1| ribosomal protein L4/L1e [Geobacillus thermoglucosidasius C56-YS93]
gi|383365187|gb|EID42488.1| 50S ribosomal protein L4/L1e [Geobacillus thermoglucosidans
TNO-09.020]
Length = 207
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N++ G + L VF + K ++ V Q A +QGTH TK +EVSG
Sbjct: 1 MPKVALYNQNGETIGEIELNDSVFGIEPNKHVLFEAVIMQRASLRQGTHKTKNRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRAPQ 82
>gi|269925832|ref|YP_003322455.1| 50S ribosomal protein L4 [Thermobaculum terrenum ATCC BAA-798]
gi|269789492|gb|ACZ41633.1| ribosomal protein L4/L1e [Thermobaculum terrenum ATCC BAA-798]
Length = 223
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ +PV N + + ++ VF + ++H+ + QLA + GTH T+T +EVSG G
Sbjct: 1 MQLPVYNLNGDIVSQLEVSDLVFGIQPNLAVMHQALVRQLANARTGTHDTRTRAEVSGGG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
+KPWRQKGTGRAR G++R PQ
Sbjct: 61 RKPWRQKGTGRARQGSIRAPQ 81
>gi|197104697|ref|YP_002130074.1| 50S ribosomal protein L4 [Phenylobacterium zucineum HLK1]
gi|226730702|sp|B4R8L8.1|RL4_PHEZH RecName: Full=50S ribosomal protein L4
gi|196478117|gb|ACG77645.1| 50S ribosomal protein L4 [Phenylobacterium zucineum HLK1]
Length = 212
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 112 GFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
G + L D+F + IR DI+ R V WQLAKR+ GTH + +EVS TGKK ++QKGTG A
Sbjct: 14 GSIELPDDIFGIEEIRADILQRCVTWQLAKRRAGTHKIQVRNEVSRTGKKMYKQKGTGGA 73
Query: 171 RHGTLRGPQGWYYNARSKAQKPCYK 195
RHG+ R Q + +KA P +
Sbjct: 74 RHGSRRAAQ---FVGGAKAHGPVVR 95
>gi|347533197|ref|YP_004839960.1| 50S ribosomal protein L4 [Roseburia hominis A2-183]
gi|345503345|gb|AEN98028.1| 50S ribosomal protein L4 [Roseburia hominis A2-183]
Length = 206
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ + L +F V + + ++H V QLA +QGT KT SEV G G+K
Sbjct: 4 VAVYNMEGKEVDSLELNDAIFGVEVNEHLVHMAVLQQLANNRQGTQKAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYY 183
PWRQKGTG AR G+ R PQ W +
Sbjct: 64 PWRQKGTGHARQGSTRAPQ-WTH 85
>gi|114771268|ref|ZP_01448688.1| 50S ribosomal protein L4 [Rhodobacterales bacterium HTCC2255]
gi|114548193|gb|EAU51080.1| 50S ribosomal protein L4 [Rhodobacterales bacterium HTCC2255]
Length = 206
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 44/67 (65%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L VF + R DI+HRVVR+QLAKRQ GTH KT SE S + KK + QKGTG AR
Sbjct: 14 GSIDLDDSVFGLEPRADILHRVVRYQLAKRQAGTHKVKTRSETSYSTKKIYNQKGTGGAR 73
Query: 172 HGTLRGP 178
HG P
Sbjct: 74 HGDRNAP 80
>gi|408501568|ref|YP_006865487.1| 50S ribosomal protein L4 [Bifidobacterium asteroides PRL2011]
gi|408466392|gb|AFU71921.1| 50S ribosomal protein L4 [Bifidobacterium asteroides PRL2011]
Length = 224
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 43/58 (74%)
Query: 122 DVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
DV +IH+VV QLA +QGTHS KT S VSG G+KPW+QKGTGRAR G++R PQ
Sbjct: 32 DVRSHVPLIHQVVVAQLAAARQGTHSVKTRSTVSGGGRKPWKQKGTGRARQGSIRAPQ 89
>gi|113476578|ref|YP_722639.1| 50S ribosomal protein L4 [Trichodesmium erythraeum IMS101]
gi|122964704|sp|Q110A8.1|RL4_TRIEI RecName: Full=50S ribosomal protein L4
gi|110167626|gb|ABG52166.1| LSU ribosomal protein L4P [Trichodesmium erythraeum IMS101]
Length = 212
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 48/76 (63%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V N+ E+ G L V I+HR +R Q+A +QGT STKT SEV G G+KPW
Sbjct: 6 VKNWQGEEVGQATLNLRVAKEESAAHIVHRSLRLQMANNRQGTASTKTRSEVRGGGRKPW 65
Query: 163 RQKGTGRARHGTLRGP 178
RQKGTGRAR G++R P
Sbjct: 66 RQKGTGRARAGSIRSP 81
>gi|308070974|ref|YP_003872579.1| 50S ribosomal protein L4 [Paenibacillus polymyxa E681]
gi|310644201|ref|YP_003948960.1| 50S ribosomal protein L4 [Paenibacillus polymyxa SC2]
gi|374320646|ref|YP_005073775.1| 50S ribosomal protein L4 [Paenibacillus terrae HPL-003]
gi|305860253|gb|ADM72041.1| 50S ribosomal protein L4 [Paenibacillus polymyxa E681]
gi|309249152|gb|ADO58719.1| 50S ribosomal protein L4 [Paenibacillus polymyxa SC2]
gi|357199655|gb|AET57552.1| 50S ribosomal protein L4 [Paenibacillus terrae HPL-003]
gi|392304897|emb|CCI71260.1| 50S ribosomal protein L4 BL4 [Paenibacillus polymyxa M1]
Length = 207
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN G + L VF + K ++H V QLA +QGTH K SEV G
Sbjct: 1 MPKVALFNISGSQVGEIELNDAVFGIEPNKHVLHDAVVMQLASLRQGTHKVKGRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPW+QKGTGRAR G++R PQ
Sbjct: 61 GRKPWKQKGTGRARQGSIRAPQ 82
>gi|56418642|ref|YP_145960.1| 50S ribosomal protein L4 [Geobacillus kaustophilus HTA426]
gi|261417608|ref|YP_003251290.1| 50S ribosomal protein L4 [Geobacillus sp. Y412MC61]
gi|297528483|ref|YP_003669758.1| ribosomal protein L4/L1e [Geobacillus sp. C56-T3]
gi|319765266|ref|YP_004130767.1| 50S ribosomal protein L4 [Geobacillus sp. Y412MC52]
gi|375006921|ref|YP_004980551.1| 50S ribosomal protein L4 [Geobacillus thermoleovorans CCB_US3_UF5]
gi|448236416|ref|YP_007400474.1| 50S ribosomal protein L4 [Geobacillus sp. GHH01]
gi|81558135|sp|Q5L3Z6.1|RL4_GEOKA RecName: Full=50S ribosomal protein L4
gi|56378484|dbj|BAD74392.1| 50S ribosomal protein L4 [Geobacillus kaustophilus HTA426]
gi|261374065|gb|ACX76808.1| ribosomal protein L4/L1e [Geobacillus sp. Y412MC61]
gi|297251735|gb|ADI25181.1| ribosomal protein L4/L1e [Geobacillus sp. C56-T3]
gi|317110132|gb|ADU92624.1| ribosomal protein L4/L1e [Geobacillus sp. Y412MC52]
gi|359285767|gb|AEV17451.1| 50S ribosomal protein L4 [Geobacillus thermoleovorans CCB_US3_UF5]
gi|445205258|gb|AGE20723.1| 50S ribosomal protein L4 [Geobacillus sp. GHH01]
Length = 207
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N++ G + L VF + K ++ V Q A +QGTH TK +EVSG
Sbjct: 1 MPKVALYNQNGQTVGEIELNDAVFGIEPNKHVLFEAVIMQRASMRQGTHKTKNRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRAPQ 82
>gi|336233429|ref|YP_004590175.1| 50S ribosomal protein L4 [Buchnera aphidicola (Cinara tujafilina)]
gi|335345370|gb|AEH39916.1| 50S ribosomal protein L4 [Buchnera aphidicola (Cinara tujafilina)]
Length = 201
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
+ + + L+ VF + + +IH+VV L+ R++G+ S K+ SEVSG+GKKPWRQKGTG
Sbjct: 7 DSEEMLTLSDIVFGKSLNEPLIHQVVTSYLSSRRKGSKSQKSRSEVSGSGKKPWRQKGTG 66
Query: 169 RARHGTLRGP 178
RAR G+LR P
Sbjct: 67 RARAGSLRSP 76
>gi|308233853|ref|ZP_07664590.1| LSU ribosomal protein L4P [Atopobium vaginae DSM 15829]
gi|328943561|ref|ZP_08241026.1| 50S ribosomal protein L4 [Atopobium vaginae DSM 15829]
gi|327491530|gb|EGF23304.1| 50S ribosomal protein L4 [Atopobium vaginae DSM 15829]
Length = 208
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 49/79 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N + + L+ DVF + ++H+VV A +QGTHSTK S VSG G K
Sbjct: 4 IEVKNVEGKSADTLELSSDVFGIEPNIPVVHQVVVAYEACLRQGTHSTKNRSAVSGGGVK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR GT+R PQ
Sbjct: 64 PFRQKGTGRARQGTIRAPQ 82
>gi|386712467|ref|YP_006178789.1| 50S ribosomal protein L4 [Halobacillus halophilus DSM 2266]
gi|384072022|emb|CCG43512.1| 50S ribosomal protein L4 [Halobacillus halophilus DSM 2266]
Length = 207
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 47/79 (59%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N + G + L VF + ++H V Q A +QGTH K SEVSG G+K
Sbjct: 4 VALLNQSGSNVGDVELNDAVFGIEPNTHVLHETVLMQRANLRQGTHKVKGRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G++R PQ
Sbjct: 64 PWRQKGTGRARQGSIRAPQ 82
>gi|392406846|ref|YP_006443454.1| 50S ribosomal protein L4 [Anaerobaculum mobile DSM 13181]
gi|390619982|gb|AFM21129.1| 50S ribosomal protein L4, bacterial/organelle [Anaerobaculum mobile
DSM 13181]
Length = 208
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + G + LA +VF I +H+VV LA ++QGTHSTKT EV G G+K
Sbjct: 4 VDVIGIDGQKVGEVALADEVFASRIHVPAMHQVVVAYLAAQRQGTHSTKTRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PWRQK TGRAR G++R P W + KP
Sbjct: 64 PWRQKHTGRARQGSIRSPL-WIKGGVAHGPKP 94
>gi|269128515|ref|YP_003301885.1| 50S ribosomal protein L4/L1e [Thermomonospora curvata DSM 43183]
gi|268313473|gb|ACY99847.1| ribosomal protein L4/L1e [Thermomonospora curvata DSM 43183]
Length = 204
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FD + +IH+VV Q A +QGTH+TKT +V G GKKP+RQKGTGRAR G++
Sbjct: 8 LPAEIFDAKVSVPLIHQVVVAQWAAARQGTHATKTRGDVRGGGKKPYRQKGTGRARQGSV 67
Query: 176 RGPQ 179
R PQ
Sbjct: 68 RAPQ 71
>gi|386773319|ref|ZP_10095697.1| 50S ribosomal protein L4 [Brachybacterium paraconglomeratum LC44]
Length = 315
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 53/85 (62%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ +L + V + + G + L +FDV +IH+VV Q A +QGTH KT +EV
Sbjct: 1 MAANLTVDVLDPAGKKSGTVELPASIFDVQTNVALIHQVVVAQQAAARQGTHKAKTRAEV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
G GKKPW+QKGTGRAR G+LR PQ
Sbjct: 61 RGGGKKPWKQKGTGRARQGSLRAPQ 85
>gi|132978|sp|P28601.1|RL4_BACST RecName: Full=50S ribosomal protein L4; Short=BL4
gi|40103|emb|CAA47403.1| ribosomal protein L4 [Geobacillus stearothermophilus]
Length = 207
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N++ G + L VF + K ++ V Q A +QGTH TK +EVSG
Sbjct: 1 MPKVALYNQNGQTVGEIELNDAVFGIEPNKHVLFEAVIMQRASMRQGTHKTKNRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRAPQ 82
>gi|239825694|ref|YP_002948318.1| 50S ribosomal protein L4 [Geobacillus sp. WCH70]
gi|259491561|sp|C5D3R8.1|RL4_GEOSW RecName: Full=50S ribosomal protein L4
gi|239805987|gb|ACS23052.1| ribosomal protein L4/L1e [Geobacillus sp. WCH70]
Length = 207
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N E G + L VF + K ++ V Q A +QGTH TK +EVSG
Sbjct: 1 MPKVALYNQSGETIGEIELNDSVFGIEPNKHVLFEAVIMQRASLRQGTHKTKNRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRAPQ 82
>gi|297703540|ref|XP_002828694.1| PREDICTED: 39S ribosomal protein L4, mitochondrial [Pongo abelii]
Length = 311
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Query: 52 SGLSFLASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDK 111
GLS LA T + P +L K + P + Q V + F E
Sbjct: 19 QGLSSLAEEAARPTENPEQVANEGLPEPVLRKVELPVPAHRRPV-QAWVESLRGFEQERV 77
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G L DVF + R DI+H+V WQ ++ TKT +EV G G+KPW QKGTGRAR
Sbjct: 78 GLADLHPDVFAIAPRLDILHQVAMWQKNFKRISYAKTKTRAEVRGGGRKPWPQKGTGRAR 137
Query: 172 HGTLRGP 178
HG++R P
Sbjct: 138 HGSIRSP 144
>gi|297569421|ref|YP_003690765.1| ribosomal protein L4/L1e [Desulfurivibrio alkaliphilus AHT2]
gi|296925336|gb|ADH86146.1| ribosomal protein L4/L1e [Desulfurivibrio alkaliphilus AHT2]
Length = 207
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 49/79 (62%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
V V N E G + L +F V + ++H +VR Q A R+ GT TKT +VSG+GK
Sbjct: 3 VTEVYNIKKEKVGDVELDDALFGVEVNPHLLHDIVRMQRANRRAGTACTKTRKDVSGSGK 62
Query: 160 KPWRQKGTGRARHGTLRGP 178
KPWRQKGTGRAR G+ + P
Sbjct: 63 KPWRQKGTGRARAGSRKSP 81
>gi|387885954|ref|YP_006316253.1| 50S ribosomal protein L4 [Francisella noatunensis subsp. orientalis
str. Toba 04]
gi|386870770|gb|AFJ42777.1| 50S ribosomal protein L4 [Francisella noatunensis subsp. orientalis
str. Toba 04]
Length = 207
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 110 DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGR 169
+ G + +A VF + +IH+VV +A +QGT + KT SEVSG G KPWRQKGTGR
Sbjct: 12 EAGVVGVADGVFAADYNESLIHQVVVAYMAGARQGTKAQKTRSEVSGGGAKPWRQKGTGR 71
Query: 170 ARHGTLRGP----QGWYYNARSKAQK 191
AR GT+R P G ++A+ K+ K
Sbjct: 72 ARAGTIRSPIFRKGGVTFSAKPKSYK 97
>gi|345021330|ref|ZP_08784943.1| 50S ribosomal protein L4 [Ornithinibacillus scapharcae TW25]
Length = 207
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P F +D G L VF + ++H V Q A +QGTH+ K SEV G
Sbjct: 1 MPKVALFKQDGSQAGEFELNESVFGIEPNTHVLHEAVVMQRASMRQGTHAVKNRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQ 82
>gi|212697254|ref|ZP_03305382.1| hypothetical protein ANHYDRO_01822 [Anaerococcus hydrogenalis DSM
7454]
gi|212675703|gb|EEB35310.1| hypothetical protein ANHYDRO_01822 [Anaerococcus hydrogenalis DSM
7454]
Length = 207
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E+ G + L +F I + ++ V+ QLA ++QGT S KT SEV G G+K
Sbjct: 4 VEVLNIKGENVGEIELNETLFAADIAETAVYDTVKNQLANKRQGTQSAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G++R P
Sbjct: 64 PFRQKGTGRARQGSIRAPH 82
>gi|405983003|ref|ZP_11041314.1| 50S ribosomal protein L4 [Slackia piriformis YIT 12062]
gi|404389712|gb|EJZ84788.1| 50S ribosomal protein L4 [Slackia piriformis YIT 12062]
Length = 207
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 41/64 (64%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L VF + ++H VVR A +QGTH TKT EV G GKKPWRQKGTGRAR GT+
Sbjct: 19 LNAAVFGIEPNVHVMHTVVRAYRAAMRQGTHDTKTRGEVRGGGKKPWRQKGTGRARQGTI 78
Query: 176 RGPQ 179
R P
Sbjct: 79 RAPH 82
>gi|450088768|ref|ZP_21854928.1| 50S ribosomal protein L4 [Streptococcus mutans NV1996]
gi|449216262|gb|EMC16396.1| 50S ribosomal protein L4 [Streptococcus mutans NV1996]
Length = 207
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G + L +FD+ + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVTLNDAIFDIEPNESVVFDVIISQRANLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRAPQ 82
>gi|405761597|ref|YP_006702193.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPNA45]
gi|404278486|emb|CCM09106.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPNA45]
Length = 207
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL+ VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGQVVLSDAVFGIESNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRSPQ 82
>gi|138893786|ref|YP_001124239.1| 50S ribosomal protein L4 [Geobacillus thermodenitrificans NG80-2]
gi|166234670|sp|A4IJJ0.1|RL4_GEOTN RecName: Full=50S ribosomal protein L4
gi|134265299|gb|ABO65494.1| Ribosomal protein L4 [Geobacillus thermodenitrificans NG80-2]
Length = 207
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N++ G + L VF + K ++ V Q A +QGTH TK +EVSG
Sbjct: 1 MPKVALYNQNGQTIGEIELNDAVFGIEPNKHVLFEAVIMQRASMRQGTHKTKNRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQ 82
>gi|325848833|ref|ZP_08170343.1| 50S ribosomal protein L4 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325480477|gb|EGC83539.1| 50S ribosomal protein L4 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 207
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E+ G + L +F I + ++ V+ QLA ++QGT S KT SEV G G+K
Sbjct: 4 VEVLNIKGENVGEIELNETLFAADIAETAVYDTVKNQLANKRQGTQSAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G++R P
Sbjct: 64 PFRQKGTGRARQGSIRAPH 82
>gi|365157325|ref|ZP_09353599.1| 50S ribosomal protein L4 [Bacillus smithii 7_3_47FAA]
gi|363625471|gb|EHL76510.1| 50S ribosomal protein L4 [Bacillus smithii 7_3_47FAA]
Length = 207
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N+ G + L +F + + ++H V Q A +QGTH K SEVSG
Sbjct: 1 MPKVALYNQSGTKVGDIELNDSIFGITPNEHVLHEAVVMQRASLRQGTHKVKNRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRAPQ 82
>gi|196251023|ref|ZP_03149705.1| ribosomal protein L4/L1e [Geobacillus sp. G11MC16]
gi|196209495|gb|EDY04272.1| ribosomal protein L4/L1e [Geobacillus sp. G11MC16]
Length = 207
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N++ G + L VF + K ++ V Q A +QGTH TK +EVSG
Sbjct: 1 MPKVALYNQNGQTIGEIELNDAVFGIEPNKHVLFEAVIMQRASMRQGTHKTKNRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQ 82
>gi|116493162|ref|YP_804897.1| 50S ribosomal protein L4P [Pediococcus pentosaceus ATCC 25745]
gi|421894155|ref|ZP_16324646.1| 50S ribosomal protein L4 [Pediococcus pentosaceus IE-3]
gi|122265374|sp|Q03EB7.1|RL4_PEDPA RecName: Full=50S ribosomal protein L4
gi|116103312|gb|ABJ68455.1| LSU ribosomal protein L4P [Pediococcus pentosaceus ATCC 25745]
gi|385272983|emb|CCG90018.1| 50S ribosomal protein L4 [Pediococcus pentosaceus IE-3]
Length = 207
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 104 TNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ F +D G + L D+F + D++ V Q A +QGTH+ K S V G G+K
Sbjct: 4 VSLFKQDGTKNGDVELNADIFGIEPNNDVVFEAVVMQRASMRQGTHAVKNRSAVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G++R PQ
Sbjct: 64 PWRQKGTGRARQGSIRSPQ 82
>gi|152964658|ref|YP_001360442.1| 50S ribosomal protein L4 [Kineococcus radiotolerans SRS30216]
gi|151359175|gb|ABS02178.1| ribosomal protein L4/L1e [Kineococcus radiotolerans SRS30216]
Length = 234
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 48/81 (59%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ +P+ G + L F +IH+VV QLA +QGTHSTK EV G G
Sbjct: 11 ITVPLRTADGGSNGTVELPAKDFGRQANISLIHQVVTAQLAAARQGTHSTKRRGEVRGGG 70
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KKP++QKGTGRAR G+LR PQ
Sbjct: 71 KKPYKQKGTGRARQGSLRAPQ 91
>gi|157690901|ref|YP_001485363.1| 50S ribosomal protein L4 [Bacillus pumilus SAFR-032]
gi|194017590|ref|ZP_03056201.1| ribosomal protein L4/L1 family [Bacillus pumilus ATCC 7061]
gi|166990946|sp|A8F986.1|RL4_BACP2 RecName: Full=50S ribosomal protein L4
gi|157679659|gb|ABV60803.1| ribosomal protein L4 [Bacillus pumilus SAFR-032]
gi|194010862|gb|EDW20433.1| ribosomal protein L4/L1 family [Bacillus pumilus ATCC 7061]
Length = 207
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G + L VF + + ++ + Q A +QGTH KT SEV G
Sbjct: 1 MPKVALFNQNGSTNGEIELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQ 82
>gi|389573511|ref|ZP_10163585.1| ribosomal protein L4/L1 family [Bacillus sp. M 2-6]
gi|388426826|gb|EIL84637.1| ribosomal protein L4/L1 family [Bacillus sp. M 2-6]
Length = 207
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G + L VF + + ++ + Q A +QGTH KT SEV G
Sbjct: 1 MPKVALFNQNGSTNGEIELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQ 82
>gi|257069507|ref|YP_003155762.1| 50S ribosomal protein L4 [Brachybacterium faecium DSM 4810]
gi|256560325|gb|ACU86172.1| LSU ribosomal protein L4P [Brachybacterium faecium DSM 4810]
Length = 312
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 53/85 (62%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ +L + V + + G + L +FDV +IH+VV Q A +QGTH KT +EV
Sbjct: 1 MAANLTVDVLDPAGKKSGSVELPASIFDVQTNVPLIHQVVVAQQAAARQGTHKAKTRAEV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQ 179
G GKKPW+QKGTGRAR G+LR PQ
Sbjct: 61 RGGGKKPWKQKGTGRARQGSLRAPQ 85
>gi|354475149|ref|XP_003499792.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like [Cricetulus
griseus]
gi|344240104|gb|EGV96207.1| 39S ribosomal protein L4, mitochondrial [Cricetulus griseus]
Length = 294
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 46/73 (63%)
Query: 106 FFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQK 165
F E G L DVF R DI+H+V WQ ++ TKT +EVSG G+KPW+QK
Sbjct: 72 FEQERVGLAELHPDVFATAPRLDILHQVATWQKNFKRISYAKTKTRAEVSGGGRKPWQQK 131
Query: 166 GTGRARHGTLRGP 178
G+GRARHG++R P
Sbjct: 132 GSGRARHGSIRSP 144
>gi|407978616|ref|ZP_11159445.1| 50S ribosomal protein L4 [Bacillus sp. HYC-10]
gi|407414812|gb|EKF36438.1| 50S ribosomal protein L4 [Bacillus sp. HYC-10]
Length = 207
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G + L VF + + ++ + Q A +QGTH KT SEV G
Sbjct: 1 MPKVALFNQNGSTNGEIELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQ 82
>gi|86135763|ref|ZP_01054342.1| 50S ribosomal protein L4 [Roseobacter sp. MED193]
gi|85826637|gb|EAQ46833.1| 50S ribosomal protein L4 [Roseobacter sp. MED193]
Length = 205
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 45/78 (57%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L D+F + R DI+HRVVRWQ Q GTH KT SEV + KK
Sbjct: 3 LDVMNLDGSKAGDIELNADLFGLEPRADILHRVVRWQRNNAQAGTHKVKTRSEVKYSTKK 62
Query: 161 PWRQKGTGRARHGTLRGP 178
+RQKGTG ARHG P
Sbjct: 63 IYRQKGTGGARHGARSAP 80
>gi|433461753|ref|ZP_20419356.1| 50S ribosomal protein L4 [Halobacillus sp. BAB-2008]
gi|432189768|gb|ELK46845.1| 50S ribosomal protein L4 [Halobacillus sp. BAB-2008]
Length = 207
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P N+ + G + L VF + ++H V Q A +QGTH K SEVSG
Sbjct: 1 MPKVALLNQGGSNVGEIELNDAVFGIEPNTHVLHETVLMQRANLRQGTHKVKGRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQ 82
>gi|77165786|ref|YP_344311.1| 50S ribosomal protein L4 [Nitrosococcus oceani ATCC 19707]
gi|109893612|sp|Q3J8R5.1|RL4_NITOC RecName: Full=50S ribosomal protein L4
gi|76884100|gb|ABA58781.1| LSU ribosomal protein L4P [Nitrosococcus oceani ATCC 19707]
Length = 206
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 108 NEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGT 167
N + G L+ VF + +IH+VV LAK + GTH+ KT SE G G KP+RQKGT
Sbjct: 11 NSETGMTQLSDTVFTQHFNEPLIHQVVTAYLAKARAGTHAQKTRSEARGGGAKPFRQKGT 70
Query: 168 GRARHGTLRGPQGWYYNARSKAQKP 192
GRAR GT+R P W R+ A KP
Sbjct: 71 GRARAGTIRSPL-WRGGGRAFAAKP 94
>gi|327287992|ref|XP_003228712.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like [Anolis
carolinensis]
Length = 314
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
Query: 69 PDSSEGAFPSDLLLKKTVL-TPDITIGLH----QDLVIPVTNFFNEDKGFMVLAGDVFDV 123
P S DL+ +L T +I I H Q V + ++ G L DVF V
Sbjct: 52 PRSCSAELQPDLVSSNPILRTCNIAIPKHLAPVQAWVESLKHYDARHMGLADLHPDVFAV 111
Query: 124 PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGP 178
R DI+H V WQ ++ TKT +EV G G+KPWRQKG+GRARHG++R P
Sbjct: 112 MPRIDILHTVATWQRNFKRISYAKTKTRAEVRGGGRKPWRQKGSGRARHGSIRSP 166
>gi|310659501|ref|YP_003937222.1| 50S ribosomal subunit protein L4 [[Clostridium] sticklandii]
gi|308826279|emb|CBH22317.1| 50S ribosomal subunit protein L4 [[Clostridium] sticklandii]
Length = 207
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + + L+ +F I + ++ V++ LA R+QGT S KT +EV G G+K
Sbjct: 4 VDVLNINGQKVEELELSESIFAAEISEYAVYEVIKNHLANRRQGTQSAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G+ R PQ
Sbjct: 64 PWRQKGTGRARQGSTRSPQ 82
>gi|256852037|ref|ZP_05557424.1| ribosomal protein L4/L1 [Lactobacillus jensenii 27-2-CHN]
gi|260661394|ref|ZP_05862307.1| ribosomal protein L4/L1 [Lactobacillus jensenii 115-3-CHN]
gi|256615449|gb|EEU20639.1| ribosomal protein L4/L1 [Lactobacillus jensenii 27-2-CHN]
gi|260547849|gb|EEX23826.1| ribosomal protein L4/L1 [Lactobacillus jensenii 115-3-CHN]
Length = 205
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
+D G + L +VF + ++++ V Q A +QGTH+TK S V G GKKPWRQKGTG
Sbjct: 12 KDAGEVTLNDNVFGIEPNENVVFDAVIRQRAGMRQGTHATKNRSAVRGGGKKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRAPQ 82
>gi|238855069|ref|ZP_04645397.1| ribosomal protein L4/L1 family protein [Lactobacillus jensenii
269-3]
gi|238832313|gb|EEQ24622.1| ribosomal protein L4/L1 family protein [Lactobacillus jensenii
269-3]
Length = 205
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
+D G + L +VF + ++++ V Q A +QGTH+TK S V G GKKPWRQKGTG
Sbjct: 12 KDAGEVTLNDNVFGIEPNENVVFDAVIRQRAGMRQGTHATKNRSAVRGGGKKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRAPQ 82
>gi|338730532|ref|YP_004659924.1| 50S ribosomal protein L4P [Thermotoga thermarum DSM 5069]
gi|335364883|gb|AEH50828.1| LSU ribosomal protein L4P [Thermotoga thermarum DSM 5069]
Length = 226
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
VI + N + G ++ +VF++ D++ R V +QL+ R+ GT STKT EVSG G+
Sbjct: 3 VIDLYNVKGQKIGTREISDEVFNIDPNYDVMWRYVDYQLSLRRAGTASTKTRGEVSGGGR 62
Query: 160 KPWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
KPW QK TGRARHG++R P W + + KP
Sbjct: 63 KPWPQKHTGRARHGSIRSPI-WRHGGVAHGPKP 94
>gi|260664854|ref|ZP_05865705.1| ribosomal protein L4/L1 [Lactobacillus jensenii SJ-7A-US]
gi|297205088|ref|ZP_06922484.1| ribosomal protein L4/L1 family protein [Lactobacillus jensenii
JV-V16]
gi|260561337|gb|EEX27310.1| ribosomal protein L4/L1 [Lactobacillus jensenii SJ-7A-US]
gi|297149666|gb|EFH29963.1| ribosomal protein L4/L1 family protein [Lactobacillus jensenii
JV-V16]
Length = 205
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
+D G + L +VF + ++++ V Q A +QGTH+TK S V G GKKPWRQKGTG
Sbjct: 12 KDAGEVTLNDNVFGIEPNENVVFDAVIRQRAGMRQGTHATKNRSAVRGGGKKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRAPQ 82
>gi|22547140|ref|NP_666500.1| 39S ribosomal protein L4, mitochondrial isoform b [Homo sapiens]
gi|12653925|gb|AAH00756.1| Mitochondrial ribosomal protein L4 [Homo sapiens]
gi|119604491|gb|EAW84085.1| mitochondrial ribosomal protein L4, isoform CRA_b [Homo sapiens]
Length = 263
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Query: 52 SGLSFLASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDK 111
GLS LA T + P +L K + P + Q V + F E
Sbjct: 19 QGLSSLAEEAARATENPEQVASEGLPEPVLRKVELPVPTHRRPV-QAWVESLRGFEQERV 77
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G L DVF R DI+H+V WQ ++ TKT +EV G G+KPW QKGTGRAR
Sbjct: 78 GLADLHPDVFATAPRLDILHQVAMWQKNFKRISYAKTKTRAEVRGGGRKPWPQKGTGRAR 137
Query: 172 HGTLRGP 178
HG++R P
Sbjct: 138 HGSIRSP 144
>gi|408529928|emb|CCK28102.1| 50S ribosomal protein L4 [Streptomyces davawensis JCM 4913]
Length = 218
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 112 GFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
G + L ++FDV I ++H+VV QLA +QGTH TK EV G GKKP+RQKGTGRA
Sbjct: 15 GSVELPAEIFDVEKISVPLLHQVVVAQLAAARQGTHKTKRRGEVRGGGKKPYRQKGTGRA 74
Query: 171 RHGTLRGPQ 179
R G+ R PQ
Sbjct: 75 RQGSTRAPQ 83
>gi|420157782|ref|ZP_14664610.1| 50S ribosomal protein L4 [Clostridium sp. MSTE9]
gi|394755610|gb|EJF38809.1| 50S ribosomal protein L4 [Clostridium sp. MSTE9]
Length = 207
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + ++ G + L+ VF + ++H +V+ LA ++QGT S T SEV+G G+K
Sbjct: 4 VAVLDMAGKEVGQIELSEAVFGIEPNVAVMHELVKNYLANQRQGTQSALTRSEVAGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PWRQKGTG AR G++R PQ W + A KP
Sbjct: 64 PWRQKGTGHARQGSIRAPQ-WRHGGVVFAPKP 94
>gi|160894755|ref|ZP_02075530.1| hypothetical protein CLOL250_02306 [Clostridium sp. L2-50]
gi|156863689|gb|EDO57120.1| 50S ribosomal protein L4 [Clostridium sp. L2-50]
Length = 206
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 42/64 (65%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L VF V I + ++H V Q A +QGT S KT SEVSG G+KPWRQKGTG AR G+
Sbjct: 19 LNDSVFGVEINEHLMHLAVVGQQANSRQGTQSAKTRSEVSGGGRKPWRQKGTGHARQGST 78
Query: 176 RGPQ 179
R PQ
Sbjct: 79 RSPQ 82
>gi|88704377|ref|ZP_01102091.1| 50S ribosomal protein L4 [Congregibacter litoralis KT71]
gi|88701428|gb|EAQ98533.1| 50S ribosomal protein L4 [Congregibacter litoralis KT71]
Length = 205
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%)
Query: 108 NEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGT 167
NE G + ++ F +D++H+VV LA +QGT + KT S+VSG GKKPWRQKGT
Sbjct: 10 NESAGTLSVSDANFAREYNEDLVHQVVTSFLAGARQGTRAQKTRSDVSGGGKKPWRQKGT 69
Query: 168 GRARHGTLRGP 178
GRAR GT+R P
Sbjct: 70 GRARAGTIRSP 80
>gi|291437838|ref|ZP_06577228.1| 50S ribosomal protein L4 [Streptomyces ghanaensis ATCC 14672]
gi|291340733|gb|EFE67689.1| 50S ribosomal protein L4 [Streptomyces ghanaensis ATCC 14672]
Length = 219
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 112 GFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
G + L ++F V + +IH+VV QLA +QGTH TKT EV G GKKP+RQKGTGRA
Sbjct: 15 GTVELPAEIFGVEKVSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKKPYRQKGTGRA 74
Query: 171 RHGTLRGPQ 179
R G+ R PQ
Sbjct: 75 RQGSTRAPQ 83
>gi|406837803|ref|ZP_11097397.1| 50S ribosomal protein L4 [Lactobacillus vini DSM 20605]
Length = 207
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + +D G + L+ ++F + + ++ V Q A +QGTH+ K S VSG
Sbjct: 1 MPTVALYKQDGSKNGEVSLSKEIFGIKPNESVVFDAVLMQRASLRQGTHAVKNRSAVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
GKKPWRQKGTGRAR G++R PQ
Sbjct: 61 GKKPWRQKGTGRARQGSIRSPQ 82
>gi|313472594|ref|ZP_07813083.1| ribosomal protein L4/L1 family protein [Lactobacillus jensenii
1153]
gi|313448951|gb|EFR61269.1| ribosomal protein L4/L1 family protein [Lactobacillus jensenii
1153]
Length = 178
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
+D G + L +VF + ++++ V Q A +QGTH+TK S V G GKKPWRQKGTG
Sbjct: 12 KDAGEVTLNDNVFGIEPNENVVFDAVIRQRAGMRQGTHATKNRSAVRGGGKKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRAPQ 82
>gi|410664377|ref|YP_006916748.1| 50S ribosomal protein L4 [Simiduia agarivorans SA1 = DSM 21679]
gi|409026734|gb|AFU99018.1| 50S ribosomal protein L4 [Simiduia agarivorans SA1 = DSM 21679]
Length = 204
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
KG + ++ F +D++H+ V +A +QGT + KT SEVSG G KPWRQKGTGRA
Sbjct: 12 KGTVSVSDVAFAREFNQDLVHQAVVAYMAAARQGTKAQKTRSEVSGGGAKPWRQKGTGRA 71
Query: 171 RHGTLRGPQGWYYNARSKAQKP 192
R GT RGP W + + A KP
Sbjct: 72 RAGTTRGPL-WRHGGVTFAAKP 92
>gi|239918198|ref|YP_002957756.1| 50S ribosomal protein L4P [Micrococcus luteus NCTC 2665]
gi|281415611|ref|ZP_06247353.1| LSU ribosomal protein L4P [Micrococcus luteus NCTC 2665]
gi|239839405|gb|ACS31202.1| LSU ribosomal protein L4P [Micrococcus luteus NCTC 2665]
Length = 211
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FDV ++H+VV QLA +QGTH TK EVSG G+KP++QKGTGRAR G++
Sbjct: 13 LPAELFDVQSNVPLMHQVVVAQLAAARQGTHKTKRRGEVSGAGRKPFKQKGTGRARQGSI 72
Query: 176 RGPQ 179
R P
Sbjct: 73 RAPH 76
>gi|88854681|ref|ZP_01129347.1| 50S ribosomal protein L4 [marine actinobacterium PHSC20C1]
gi|88815842|gb|EAR25698.1| 50S ribosomal protein L4 [marine actinobacterium PHSC20C1]
Length = 219
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FDV +IH+VV Q A +QGTH+T EVSG+G+KP++QKGTGRAR G++
Sbjct: 20 LPAEIFDVQTNVPLIHQVVVAQRAAARQGTHNTLRRGEVSGSGRKPFKQKGTGRARQGSI 79
Query: 176 RGPQ 179
R PQ
Sbjct: 80 RAPQ 83
>gi|400975465|ref|ZP_10802696.1| 50S ribosomal protein L4 [Salinibacterium sp. PAMC 21357]
Length = 219
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FDV +IH+VV Q A +QGTH+T EVSG+G+KP++QKGTGRAR G++
Sbjct: 20 LPAEIFDVQTNVPLIHQVVVAQRAAARQGTHNTLRRGEVSGSGRKPFKQKGTGRARQGSI 79
Query: 176 RGPQ 179
R PQ
Sbjct: 80 RAPQ 83
>gi|308235495|ref|ZP_07666232.1| 50S ribosomal protein L4 [Gardnerella vaginalis ATCC 14018 = JCM
11026]
gi|311115166|ref|YP_003986387.1| 50S ribosomal protein L4/L1 family protein [Gardnerella vaginalis
ATCC 14019]
gi|385801210|ref|YP_005837613.1| 50S ribosomal protein L4 [Gardnerella vaginalis HMP9231]
gi|415703880|ref|ZP_11459631.1| 50S ribosomal protein L4 [Gardnerella vaginalis 284V]
gi|415704820|ref|ZP_11460091.1| 50S ribosomal protein L4 [Gardnerella vaginalis 75712]
gi|415705943|ref|ZP_11461082.1| 50S ribosomal protein L4 [Gardnerella vaginalis 0288E]
gi|415712838|ref|ZP_11464996.1| 50S ribosomal protein L4 [Gardnerella vaginalis 55152]
gi|415715250|ref|ZP_11465804.1| 50S ribosomal protein L4 [Gardnerella vaginalis 1400E]
gi|417557071|ref|ZP_12208123.1| 50S ribosomal protein L4 [Gardnerella vaginalis 315-A]
gi|310946660|gb|ADP39364.1| ribosomal protein L4/L1 family protein [Gardnerella vaginalis ATCC
14019]
gi|333393258|gb|AEF31176.1| 50S ribosomal protein L4 [Gardnerella vaginalis HMP9231]
gi|333601712|gb|EGL13152.1| 50S ribosomal protein L4 [Gardnerella vaginalis 315-A]
gi|388051186|gb|EIK74211.1| 50S ribosomal protein L4 [Gardnerella vaginalis 284V]
gi|388051542|gb|EIK74566.1| 50S ribosomal protein L4 [Gardnerella vaginalis 75712]
gi|388055368|gb|EIK78281.1| 50S ribosomal protein L4 [Gardnerella vaginalis 0288E]
gi|388056735|gb|EIK79594.1| 50S ribosomal protein L4 [Gardnerella vaginalis 55152]
gi|388058641|gb|EIK81429.1| 50S ribosomal protein L4 [Gardnerella vaginalis 1400E]
Length = 221
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVF-----DVPIRKDIIHRVVRWQLAKRQQGTHSTKTIS 152
++ + VT+ G + ++F DV ++H+VV QLA +QGTH+ K +
Sbjct: 3 NVTLNVTDTKGNANGTVEAPAEIFGISNEDVLAHGPLVHQVVIAQLAAARQGTHAVKNRA 62
Query: 153 EVSGTGKKPWRQKGTGRARHGTLRGPQGWYY 183
VSG GKKPW+QKGTGRAR G++R PQ W +
Sbjct: 63 NVSGGGKKPWKQKGTGRARQGSIRAPQ-WVH 92
>gi|56707479|ref|YP_169375.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
SCHU S4]
gi|89255671|ref|YP_513032.1| 50S ribosomal protein L4 [Francisella tularensis subsp. holarctica
LVS]
gi|110669950|ref|YP_666507.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
FSC198]
gi|115314172|ref|YP_762895.1| 50S ribosomal protein L4 [Francisella tularensis subsp. holarctica
OSU18]
gi|118496853|ref|YP_897903.1| 50S ribosomal protein L4 [Francisella novicida U112]
gi|134302584|ref|YP_001122555.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|156501621|ref|YP_001427686.1| 50S ribosomal protein L4 [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|254370828|ref|ZP_04986833.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
FSC033]
gi|290953210|ref|ZP_06557831.1| 50S ribosomal protein L4 [Francisella tularensis subsp. holarctica
URFT1]
gi|379716669|ref|YP_005305005.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
TIGB03]
gi|379716747|ref|YP_005305083.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
TIGB03]
gi|379725351|ref|YP_005317537.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
TI0902]
gi|385792176|ref|YP_005825152.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|385794088|ref|YP_005830494.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
NE061598]
gi|421752469|ref|ZP_16189494.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
AS_713]
gi|421754335|ref|ZP_16191310.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
831]
gi|421754954|ref|ZP_16191912.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
80700075]
gi|421758066|ref|ZP_16194926.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
80700103]
gi|421759897|ref|ZP_16196721.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
70102010]
gi|422938167|ref|YP_007011314.1| 50S ribosomal protein L4 [Francisella tularensis subsp. holarctica
FSC200]
gi|423049981|ref|YP_007008415.1| 50S ribosomal protein L4 [Francisella tularensis subsp. holarctica
F92]
gi|424675219|ref|ZP_18112128.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
70001275]
gi|81597928|sp|Q5NHW7.1|RL4_FRATT RecName: Full=50S ribosomal protein L4
gi|109893596|sp|Q2A5G9.1|RL4_FRATH RecName: Full=50S ribosomal protein L4
gi|122325786|sp|Q0BNS6.1|RL4_FRATO RecName: Full=50S ribosomal protein L4
gi|123063580|sp|Q14JB9.1|RL4_FRAT1 RecName: Full=50S ribosomal protein L4
gi|166234667|sp|A7N9S7.1|RL4_FRATF RecName: Full=50S ribosomal protein L4
gi|166234668|sp|A0Q4I4.1|RL4_FRATN RecName: Full=50S ribosomal protein L4
gi|166234669|sp|A4IZT3.1|RL4_FRATW RecName: Full=50S ribosomal protein L4
gi|56603971|emb|CAG44959.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
SCHU S4]
gi|89143502|emb|CAJ78678.1| 50S ribosomal protein L4 [Francisella tularensis subsp. holarctica
LVS]
gi|110320283|emb|CAL08342.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
FSC198]
gi|115129071|gb|ABI82258.1| ribosomal protein L4 [Francisella tularensis subsp. holarctica
OSU18]
gi|118422759|gb|ABK89149.1| 50S ribosomal protein L4 [Francisella novicida U112]
gi|134050361|gb|ABO47432.1| ribosomal protein L4 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|151569071|gb|EDN34725.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
FSC033]
gi|156252224|gb|ABU60730.1| ribosomal protein L4 [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|282158623|gb|ADA78014.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
NE061598]
gi|328676322|gb|AEB27192.1| LSU ribosomal protein L4p (L1e) [Francisella cf. novicida Fx1]
gi|377826800|gb|AFB80048.1| LSU ribosomal protein L4p (L1e) [Francisella tularensis subsp.
tularensis TI0902]
gi|377828346|gb|AFB78425.1| LSU ribosomal protein L4p (L1e) [Francisella tularensis subsp.
tularensis TIGB03]
gi|377828424|gb|AFB78503.1| LSU ribosomal protein L4p (L1e) [Francisella tularensis subsp.
tularensis TIGB03]
gi|407293318|gb|AFT92224.1| 50S ribosomal protein L4 [Francisella tularensis subsp. holarctica
FSC200]
gi|409084859|gb|EKM85020.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
831]
gi|409085053|gb|EKM85206.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
AS_713]
gi|409089498|gb|EKM89538.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
80700075]
gi|409089814|gb|EKM89846.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
70102010]
gi|409090636|gb|EKM90649.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
80700103]
gi|417434168|gb|EKT89136.1| 50S ribosomal protein L4 [Francisella tularensis subsp. tularensis
70001275]
gi|421950703|gb|AFX69952.1| 50S ribosomal protein L4 [Francisella tularensis subsp. holarctica
F92]
Length = 207
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + + ++ G + +A VF + +IH+VV +A +QGT + KT SEVSG G K
Sbjct: 3 LNIKSLAGQEAGSLGVAEGVFAADYNEALIHQVVVAYMAGARQGTKAQKTRSEVSGGGAK 62
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRAR GT+R P
Sbjct: 63 PWRQKGTGRARAGTIRSP 80
>gi|29831470|ref|NP_826104.1| 50S ribosomal protein L4 [Streptomyces avermitilis MA-4680]
gi|46577225|sp|Q82DP4.1|RL4_STRAW RecName: Full=50S ribosomal protein L4
gi|29608585|dbj|BAC72639.1| putative ribosomal protein L4 [Streptomyces avermitilis MA-4680]
Length = 221
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 109 EDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGT 167
++ G + L ++FDV I ++H+VV QLA +QGTH K EV G GKKP+RQKGT
Sbjct: 12 DNAGTVELPAEIFDVEKISIPLLHQVVVAQLAAARQGTHKVKRRGEVRGGGKKPYRQKGT 71
Query: 168 GRARHGTLRGPQ 179
GRAR G+ R PQ
Sbjct: 72 GRARQGSTRAPQ 83
>gi|415721806|ref|ZP_11468739.1| 50S ribosomal protein L4 [Gardnerella vaginalis 00703Bmash]
gi|388060511|gb|EIK83203.1| 50S ribosomal protein L4 [Gardnerella vaginalis 00703Bmash]
Length = 221
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVF-----DVPIRKDIIHRVVRWQLAKRQQGTHSTKTIS 152
++ + VT+ G + ++F DV ++H+VV QLA +QGTH+ K +
Sbjct: 3 NVTLNVTDTKGNANGTVEAPAEIFGISNEDVLAHGPLVHQVVIAQLAAARQGTHAVKNRA 62
Query: 153 EVSGTGKKPWRQKGTGRARHGTLRGPQGWYY 183
VSG GKKPW+QKGTGRAR G++R PQ W +
Sbjct: 63 NVSGGGKKPWKQKGTGRARQGSIRAPQ-WVH 92
>gi|254418759|ref|ZP_05032483.1| ribosomal protein L4/L1 family [Brevundimonas sp. BAL3]
gi|196184936|gb|EDX79912.1| ribosomal protein L4/L1 family [Brevundimonas sp. BAL3]
Length = 212
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
+ V + G + L+ VF + IR DI+ R V WQLAKR+ GTH +T +E S TGK
Sbjct: 3 LSVIQLDGKAAGDVELSDAVFGISDIRGDILARTVNWQLAKRRAGTHKVQTRNENSRTGK 62
Query: 160 KPWRQKGTGRARHGTLRGPQ 179
K ++QKGTG ARHG+ R PQ
Sbjct: 63 KMYKQKGTGGARHGSRRAPQ 82
>gi|313895056|ref|ZP_07828613.1| 50S ribosomal protein L4 [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975951|gb|EFR41409.1| 50S ribosomal protein L4 [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 207
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + ++ G + L+ D F+V + ++H+ V QLA ++ GTH+TKT V G GKK
Sbjct: 4 VAVYDMSHKQVGEIDLSDDFFNVEMNAGLLHQAVVLQLASQRLGTHATKTRGLVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRAR G+ R P
Sbjct: 64 PWRQKGTGRARAGSTRSP 81
>gi|402302062|ref|ZP_10821182.1| 50S ribosomal protein L4 [Selenomonas sp. FOBRC9]
gi|400381049|gb|EJP33853.1| 50S ribosomal protein L4 [Selenomonas sp. FOBRC9]
Length = 207
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + ++ G + L+ D F+V + ++H+ V QLA ++ GTH+TKT V G GKK
Sbjct: 4 VAVYDMSHKQVGEIDLSDDFFNVEMNAGLLHQAVVLQLASQRLGTHATKTRGLVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRAR G+ R P
Sbjct: 64 PWRQKGTGRARAGSTRSP 81
>gi|298253072|ref|ZP_06976864.1| ribosomal protein L4 [Gardnerella vaginalis 5-1]
gi|297532467|gb|EFH71353.1| ribosomal protein L4 [Gardnerella vaginalis 5-1]
Length = 221
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVF-----DVPIRKDIIHRVVRWQLAKRQQGTHSTKTIS 152
++ + VT+ G + ++F DV ++H+VV QLA +QGTH+ K +
Sbjct: 3 NVTLNVTDTKGNANGTVEAPAEIFGISNEDVLAHGPLVHQVVIAQLAAARQGTHAVKNRA 62
Query: 153 EVSGTGKKPWRQKGTGRARHGTLRGPQGWYY 183
VSG GKKPW+QKGTGRAR G++R PQ W +
Sbjct: 63 NVSGGGKKPWKQKGTGRARQGSIRAPQ-WVH 92
>gi|415725188|ref|ZP_11470191.1| 50S ribosomal protein L4 [Gardnerella vaginalis 00703C2mash]
gi|388061993|gb|EIK84629.1| 50S ribosomal protein L4 [Gardnerella vaginalis 00703C2mash]
Length = 221
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVF-----DVPIRKDIIHRVVRWQLAKRQQGTHSTKTIS 152
++ + VT+ G + ++F DV ++H+VV QLA +QGTH+ K +
Sbjct: 3 NVTLNVTDTKGNANGTVEAPAEIFGISNEDVLAHGPLVHQVVIAQLAAARQGTHAVKNRA 62
Query: 153 EVSGTGKKPWRQKGTGRARHGTLRGPQGWYY 183
VSG GKKPW+QKGTGRAR G++R PQ W +
Sbjct: 63 NVSGGGKKPWKQKGTGRARQGSIRAPQ-WVH 92
>gi|317496189|ref|ZP_07954549.1| ribosomal protein L4/L1 family protein [Gemella morbillorum M424]
gi|316913764|gb|EFV35250.1| ribosomal protein L4/L1 family protein [Gemella morbillorum M424]
Length = 207
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNED--KGFMVLAGD-VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + F +D K V A D VF + + ++ + V Q A +QGTH TK SEVSG
Sbjct: 1 MPQLDLFKQDGTKVGAVEANDAVFGIEPNQHVLFQAVTLQRASLRQGTHKTKGRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQ 82
>gi|283782759|ref|YP_003373513.1| 50S ribosomal protein L4/L1 family protein [Gardnerella vaginalis
409-05]
gi|283440975|gb|ADB13441.1| ribosomal protein L4/L1 family protein [Gardnerella vaginalis
409-05]
Length = 221
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVF-----DVPIRKDIIHRVVRWQLAKRQQGTHSTKTIS 152
++ + VT+ G + ++F DV ++H+VV QLA +QGTH+ K +
Sbjct: 3 NVTLNVTDTKGNANGTVEAPAEIFGISNEDVLAHGPLVHQVVIAQLAAARQGTHAVKNRA 62
Query: 153 EVSGTGKKPWRQKGTGRARHGTLRGPQGWYY 183
VSG GKKPW+QKGTGRAR G++R PQ W +
Sbjct: 63 NVSGGGKKPWKQKGTGRARQGSIRAPQ-WVH 92
>gi|329770039|ref|ZP_08261434.1| 50S ribosomal protein L4 [Gemella sanguinis M325]
gi|328837350|gb|EGF86980.1| 50S ribosomal protein L4 [Gemella sanguinis M325]
Length = 207
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNED--KGFMVLAGD-VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + F +D K V A D VF + + ++ + V Q A +QGTH TK SEVSG
Sbjct: 1 MPQLDLFKQDGTKVGAVEANDAVFGIEPNQHVLFQAVTLQRASLRQGTHKTKGRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQ 82
>gi|260577180|ref|ZP_05845157.1| ribosomal protein L4/L1e [Rhodobacter sp. SW2]
gi|259020654|gb|EEW23973.1| ribosomal protein L4/L1e [Rhodobacter sp. SW2]
Length = 206
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L +F + R DI+HRVVRWQ AK Q GTHST T +EVS + KK ++QKGTG AR
Sbjct: 14 GSITLDEALFGLEPRADILHRVVRWQRAKAQAGTHSTLTRAEVSYSTKKIYKQKGTGGAR 73
Query: 172 HGTLRGP 178
HG+ + P
Sbjct: 74 HGSKKAP 80
>gi|187932142|ref|YP_001892127.1| 50S ribosomal protein L4 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|226730667|sp|B2SDY4.1|RL4_FRATM RecName: Full=50S ribosomal protein L4
gi|187713051|gb|ACD31348.1| 50S ribosomal protein L4 [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 207
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + + ++ G + +A VF + +IH+VV +A +QGT + KT SEVSG G K
Sbjct: 3 LNIKSLAGQEAGSLGVAEGVFAADYNEALIHQVVVAYMAGARQGTKAQKTRSEVSGGGAK 62
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRAR GT+R P
Sbjct: 63 PWRQKGTGRARAGTIRSP 80
>gi|167645579|ref|YP_001683242.1| 50S ribosomal protein L4 [Caulobacter sp. K31]
gi|189029494|sp|B0T2C3.1|RL4_CAUSK RecName: Full=50S ribosomal protein L4
gi|167348009|gb|ABZ70744.1| ribosomal protein L4/L1e [Caulobacter sp. K31]
Length = 212
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
+ V N G + L +F + IR DI+ RVV WQLAKR+ G H + +EVS TGK
Sbjct: 3 LDVINLDGGKAGSVDLDDAIFGIADIRGDILQRVVTWQLAKRRSGNHKIQVRNEVSRTGK 62
Query: 160 KPWRQKGTGRARHGTLRGPQGWYYNARSKAQKPCYK 195
K ++QKGTG ARHG+ R Q + +KA P +
Sbjct: 63 KMYKQKGTGSARHGSRRAAQ---FVGGAKAHGPVVR 95
>gi|15900146|ref|NP_344750.1| 50S ribosomal protein L4 [Streptococcus pneumoniae TIGR4]
gi|15902233|ref|NP_357783.1| 50S ribosomal protein L4 [Streptococcus pneumoniae R6]
gi|111658800|ref|ZP_01409431.1| hypothetical protein SpneT_02000097 [Streptococcus pneumoniae
TIGR4]
gi|116515366|ref|YP_815713.1| 50S ribosomal protein L4 [Streptococcus pneumoniae D39]
gi|148987946|ref|ZP_01819409.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP6-BS73]
gi|148992786|ref|ZP_01822429.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP9-BS68]
gi|148996631|ref|ZP_01824349.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP11-BS70]
gi|149001685|ref|ZP_01826658.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP14-BS69]
gi|149005959|ref|ZP_01829688.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP18-BS74]
gi|149011078|ref|ZP_01832383.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP19-BS75]
gi|149017898|ref|ZP_01834357.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP23-BS72]
gi|168483846|ref|ZP_02708798.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae
CDC1873-00]
gi|168489687|ref|ZP_02713886.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae SP195]
gi|168492163|ref|ZP_02716306.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae
CDC0288-04]
gi|168493903|ref|ZP_02718046.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae
CDC3059-06]
gi|168576363|ref|ZP_02722246.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae MLV-016]
gi|169833141|ref|YP_001693742.1| 50S ribosomal protein L4 [Streptococcus pneumoniae Hungary19A-6]
gi|182683189|ref|YP_001834936.1| 50S ribosomal protein L4 [Streptococcus pneumoniae CGSP14]
gi|225853816|ref|YP_002735328.1| 50S ribosomal protein L4 [Streptococcus pneumoniae JJA]
gi|225855975|ref|YP_002737486.1| 50S ribosomal protein L4 [Streptococcus pneumoniae P1031]
gi|225858064|ref|YP_002739574.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 70585]
gi|225860252|ref|YP_002741761.1| 50S ribosomal protein L4 [Streptococcus pneumoniae Taiwan19F-14]
gi|237649722|ref|ZP_04523974.1| 50S ribosomal protein L4 [Streptococcus pneumoniae CCRI 1974]
gi|298230367|ref|ZP_06964048.1| 50S ribosomal protein L4 [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298255988|ref|ZP_06979574.1| 50S ribosomal protein L4 [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298502024|ref|YP_003723964.1| 50S ribosomal protein L4 [Streptococcus pneumoniae TCH8431/19A]
gi|303255094|ref|ZP_07341170.1| 50S ribosomal protein L4 [Streptococcus pneumoniae BS455]
gi|303259262|ref|ZP_07345240.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP-BS293]
gi|303261017|ref|ZP_07346966.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP14-BS292]
gi|303263345|ref|ZP_07349268.1| 50S ribosomal protein L4 [Streptococcus pneumoniae BS397]
gi|303265510|ref|ZP_07351410.1| 50S ribosomal protein L4 [Streptococcus pneumoniae BS457]
gi|303267932|ref|ZP_07353734.1| 50S ribosomal protein L4 [Streptococcus pneumoniae BS458]
gi|307066887|ref|YP_003875853.1| hypothetical protein SPAP_0258 [Streptococcus pneumoniae AP200]
gi|307126430|ref|YP_003878461.1| 50S ribosomal protein L4/L1 family [Streptococcus pneumoniae
670-6B]
gi|387625701|ref|YP_006061873.1| 50S ribosomal protein L4 [Streptococcus pneumoniae INV104]
gi|387758565|ref|YP_006065543.1| 50S ribosomal protein L4 [Streptococcus pneumoniae INV200]
gi|387787421|ref|YP_006252489.1| 50S ribosomal protein L4 [Streptococcus pneumoniae ST556]
gi|410475710|ref|YP_006742469.1| 50S ribosomal protein L4 [Streptococcus pneumoniae gamPNI0373]
gi|417311811|ref|ZP_12098528.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA04375]
gi|417675991|ref|ZP_12325404.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17545]
gi|417678181|ref|ZP_12327582.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17570]
gi|417685693|ref|ZP_12334973.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41301]
gi|417695378|ref|ZP_12344558.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47368]
gi|417697684|ref|ZP_12346857.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41317]
gi|418075347|ref|ZP_12712589.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47502]
gi|418077754|ref|ZP_12714978.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 4027-06]
gi|418079913|ref|ZP_12717129.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 6735-05]
gi|418082129|ref|ZP_12719331.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44288]
gi|418084320|ref|ZP_12721508.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47281]
gi|418088016|ref|ZP_12725181.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47033]
gi|418088618|ref|ZP_12725779.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA43265]
gi|418090842|ref|ZP_12727987.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44452]
gi|418093078|ref|ZP_12730209.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA49138]
gi|418095314|ref|ZP_12732430.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA16531]
gi|418097627|ref|ZP_12734729.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 6901-05]
gi|418099808|ref|ZP_12736897.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 7286-06]
gi|418101933|ref|ZP_12739010.1| 50S ribosomal protein L4 [Streptococcus pneumoniae NP070]
gi|418108455|ref|ZP_12745490.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41410]
gi|418109185|ref|ZP_12746214.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA49447]
gi|418111569|ref|ZP_12748574.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41538]
gi|418113806|ref|ZP_12750799.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 5787-06]
gi|418115973|ref|ZP_12752950.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 6963-05]
gi|418118169|ref|ZP_12755130.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA18523]
gi|418124838|ref|ZP_12761761.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44511]
gi|418129391|ref|ZP_12766275.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA07643]
gi|418131624|ref|ZP_12768500.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA11304]
gi|418133938|ref|ZP_12770798.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA11426]
gi|418138559|ref|ZP_12775391.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13338]
gi|418140840|ref|ZP_12777655.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13455]
gi|418142997|ref|ZP_12779800.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13494]
gi|418145452|ref|ZP_12782238.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13637]
gi|418147693|ref|ZP_12784460.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13856]
gi|418149802|ref|ZP_12786558.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA14798]
gi|418151980|ref|ZP_12788720.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA16121]
gi|418154265|ref|ZP_12790996.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA16242]
gi|418156455|ref|ZP_12793174.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA16833]
gi|418158854|ref|ZP_12795560.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17227]
gi|418161261|ref|ZP_12797952.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17328]
gi|418163572|ref|ZP_12800248.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17371]
gi|418168312|ref|ZP_12804958.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19077]
gi|418170452|ref|ZP_12807082.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19451]
gi|418175025|ref|ZP_12811623.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41437]
gi|418179596|ref|ZP_12816171.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41688]
gi|418181845|ref|ZP_12818406.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA43380]
gi|418186231|ref|ZP_12822762.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47360]
gi|418188457|ref|ZP_12824972.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47373]
gi|418190684|ref|ZP_12827189.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47388]
gi|418192907|ref|ZP_12829403.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47439]
gi|418195026|ref|ZP_12831507.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47688]
gi|418197143|ref|ZP_12833609.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47778]
gi|418199166|ref|ZP_12835615.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47976]
gi|418201528|ref|ZP_12837960.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA52306]
gi|418213420|ref|ZP_12840155.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA54644]
gi|418217960|ref|ZP_12844629.1| 50S ribosomal protein L4 [Streptococcus pneumoniae NP127]
gi|418220159|ref|ZP_12846816.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47751]
gi|418222530|ref|ZP_12849176.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 5185-06]
gi|418224665|ref|ZP_12851295.1| 50S ribosomal protein L4 [Streptococcus pneumoniae NP112]
gi|418226833|ref|ZP_12853454.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 3063-00]
gi|418228955|ref|ZP_12855566.1| 50S ribosomal protein L4 [Streptococcus pneumoniae EU-NP01]
gi|418233439|ref|ZP_12860020.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA08780]
gi|418237800|ref|ZP_12864357.1| 50S ribosomal protein L4 [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419422541|ref|ZP_13962760.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA43264]
gi|419424290|ref|ZP_13964493.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 7533-05]
gi|419426423|ref|ZP_13966607.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 5652-06]
gi|419428498|ref|ZP_13968669.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA11856]
gi|419435136|ref|ZP_13975232.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 8190-05]
gi|419437874|ref|ZP_13977944.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13499]
gi|419439455|ref|ZP_13979512.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA40410]
gi|419443874|ref|ZP_13983889.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19923]
gi|419445984|ref|ZP_13985990.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 7879-04]
gi|419448143|ref|ZP_13988141.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 4075-00]
gi|419450236|ref|ZP_13990225.1| 50S ribosomal protein L4 [Streptococcus pneumoniae EU-NP02]
gi|419452482|ref|ZP_13992457.1| 50S ribosomal protein L4 [Streptococcus pneumoniae EU-NP03]
gi|419454636|ref|ZP_13994599.1| 50S ribosomal protein L4 [Streptococcus pneumoniae EU-NP04]
gi|419456805|ref|ZP_13996754.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA02254]
gi|419459085|ref|ZP_13999021.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA02270]
gi|419461345|ref|ZP_14001263.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA02714]
gi|419465868|ref|ZP_14005754.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA05248]
gi|419470246|ref|ZP_14010106.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA07914]
gi|419474612|ref|ZP_14014454.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA14688]
gi|419476878|ref|ZP_14016704.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA18068]
gi|419481255|ref|ZP_14021051.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA40563]
gi|419483484|ref|ZP_14023260.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA43257]
gi|419485719|ref|ZP_14025486.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44128]
gi|419488091|ref|ZP_14027844.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44386]
gi|419494556|ref|ZP_14034276.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47461]
gi|419500988|ref|ZP_14040675.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47628]
gi|419503092|ref|ZP_14042768.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47760]
gi|419505207|ref|ZP_14044868.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA49194]
gi|419507314|ref|ZP_14046970.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA49542]
gi|419511673|ref|ZP_14051307.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA05578]
gi|419513825|ref|ZP_14053453.1| 50S ribosomal protein L4 [Streptococcus pneumoniae England14-9]
gi|419515942|ref|ZP_14055560.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA02506]
gi|419518051|ref|ZP_14057661.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA08825]
gi|419520192|ref|ZP_14059791.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA05245]
gi|419522428|ref|ZP_14062011.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13723]
gi|419524980|ref|ZP_14064546.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA14373]
gi|419527245|ref|ZP_14066792.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17719]
gi|419531503|ref|ZP_14071023.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47794]
gi|421210226|ref|ZP_15667218.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070035]
gi|421219455|ref|ZP_15676317.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070425]
gi|421221772|ref|ZP_15678573.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070531]
gi|421226383|ref|ZP_15683097.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2072047]
gi|421231043|ref|ZP_15687693.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2080076]
gi|421233271|ref|ZP_15689896.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2061617]
gi|421235409|ref|ZP_15692010.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2071004]
gi|421237668|ref|ZP_15694241.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2071247]
gi|421242041|ref|ZP_15698570.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2081074]
gi|421244114|ref|ZP_15700619.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2081685]
gi|421246382|ref|ZP_15702873.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2082170]
gi|421248578|ref|ZP_15705041.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2082239]
gi|421265291|ref|ZP_15716175.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPAR27]
gi|421267442|ref|ZP_15718317.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPAR95]
gi|421269650|ref|ZP_15720507.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPAR48]
gi|421271869|ref|ZP_15722716.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPAR55]
gi|421274193|ref|ZP_15725025.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA52612]
gi|421278013|ref|ZP_15728825.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17301]
gi|421282461|ref|ZP_15733251.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA04216]
gi|421284422|ref|ZP_15735200.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA60190]
gi|421286750|ref|ZP_15737517.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA58771]
gi|421293187|ref|ZP_15743914.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA56113]
gi|421295491|ref|ZP_15746206.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA58581]
gi|421299939|ref|ZP_15750611.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19998]
gi|421302075|ref|ZP_15752740.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17484]
gi|421306416|ref|ZP_15757063.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA60132]
gi|421313196|ref|ZP_15763790.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47562]
gi|444383372|ref|ZP_21181562.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PCS8106]
gi|444386050|ref|ZP_21184115.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PCS8203]
gi|444386742|ref|ZP_21184769.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PCS125219]
gi|444390629|ref|ZP_21188544.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PCS70012]
gi|444392263|ref|ZP_21190000.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PCS81218]
gi|444394978|ref|ZP_21192526.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0002]
gi|444396682|ref|ZP_21194169.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0006]
gi|444398748|ref|ZP_21196224.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0007]
gi|444401706|ref|ZP_21198889.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0008]
gi|444404667|ref|ZP_21201613.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0009]
gi|444407051|ref|ZP_21203718.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0010]
gi|444409082|ref|ZP_21205682.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0076]
gi|444413643|ref|ZP_21209958.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0153]
gi|444414074|ref|ZP_21210380.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0199]
gi|444417571|ref|ZP_21213601.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0360]
gi|444420669|ref|ZP_21216439.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0427]
gi|444421764|ref|ZP_21217434.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0446]
gi|46396654|sp|Q97SV4.1|RL4_STRPN RecName: Full=50S ribosomal protein L4
gi|46577255|sp|Q8CWV7.1|RL4_STRR6 RecName: Full=50S ribosomal protein L4
gi|122279401|sp|Q04MN5.1|RL4_STRP2 RecName: Full=50S ribosomal protein L4
gi|226730731|sp|B1I8J9.1|RL4_STRPI RecName: Full=50S ribosomal protein L4
gi|226730739|sp|B2IS41.1|RL4_STRPS RecName: Full=50S ribosomal protein L4
gi|254803755|sp|C1CAL3.1|RL4_STRP7 RecName: Full=50S ribosomal protein L4
gi|254803758|sp|C1CC07.1|RL4_STRZJ RecName: Full=50S ribosomal protein L4
gi|254803759|sp|C1CI98.1|RL4_STRZP RecName: Full=50S ribosomal protein L4
gi|254803760|sp|C1CP89.1|RL4_STRZT RecName: Full=50S ribosomal protein L4
gi|14971678|gb|AAK74390.1| ribosomal protein L4 [Streptococcus pneumoniae TIGR4]
gi|15457733|gb|AAK98993.1| 50S Ribosomal protein L4 [Streptococcus pneumoniae R6]
gi|116075942|gb|ABJ53662.1| ribosomal protein L4 [Streptococcus pneumoniae D39]
gi|147757206|gb|EDK64245.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP11-BS70]
gi|147760143|gb|EDK67132.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP14-BS69]
gi|147762315|gb|EDK69276.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP18-BS74]
gi|147764714|gb|EDK71644.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP19-BS75]
gi|147926410|gb|EDK77483.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP6-BS73]
gi|147928512|gb|EDK79527.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP9-BS68]
gi|147931462|gb|EDK82440.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP23-BS72]
gi|168995643|gb|ACA36255.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae
Hungary19A-6]
gi|172042817|gb|EDT50863.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae
CDC1873-00]
gi|182628523|gb|ACB89471.1| 50S ribosomal protein L4 [Streptococcus pneumoniae CGSP14]
gi|183571793|gb|EDT92321.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae SP195]
gi|183573611|gb|EDT94139.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae
CDC0288-04]
gi|183576018|gb|EDT96546.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae
CDC3059-06]
gi|183577871|gb|EDT98399.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae MLV-016]
gi|225720617|gb|ACO16471.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae 70585]
gi|225723287|gb|ACO19140.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae JJA]
gi|225725631|gb|ACO21483.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae P1031]
gi|225728067|gb|ACO23918.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae
Taiwan19F-14]
gi|298237619|gb|ADI68750.1| 50S ribosomal protein L4 [Streptococcus pneumoniae TCH8431/19A]
gi|301793483|emb|CBW35856.1| 50S ribosomal protein L4 [Streptococcus pneumoniae INV104]
gi|301801154|emb|CBW33827.1| 50S ribosomal protein L4 [Streptococcus pneumoniae INV200]
gi|302597924|gb|EFL64994.1| 50S ribosomal protein L4 [Streptococcus pneumoniae BS455]
gi|302637854|gb|EFL68340.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP14-BS292]
gi|302639680|gb|EFL70137.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP-BS293]
gi|302642628|gb|EFL72973.1| 50S ribosomal protein L4 [Streptococcus pneumoniae BS458]
gi|302644950|gb|EFL75197.1| 50S ribosomal protein L4 [Streptococcus pneumoniae BS457]
gi|302647118|gb|EFL77342.1| 50S ribosomal protein L4 [Streptococcus pneumoniae BS397]
gi|306408424|gb|ADM83851.1| hypothetical protein SPAP_0258 [Streptococcus pneumoniae AP200]
gi|306483492|gb|ADM90361.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae 670-6B]
gi|327390629|gb|EGE88969.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA04375]
gi|332075875|gb|EGI86342.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17570]
gi|332076656|gb|EGI87118.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17545]
gi|332077511|gb|EGI87972.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41301]
gi|332202125|gb|EGJ16194.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41317]
gi|332203375|gb|EGJ17442.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47368]
gi|353748776|gb|EHD29427.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 4027-06]
gi|353751361|gb|EHD31993.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47502]
gi|353754232|gb|EHD34845.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 6735-05]
gi|353755693|gb|EHD36296.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47033]
gi|353757566|gb|EHD38159.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44288]
gi|353760623|gb|EHD41199.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47281]
gi|353764359|gb|EHD44908.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA43265]
gi|353766215|gb|EHD46755.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44452]
gi|353767431|gb|EHD47965.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA49138]
gi|353771783|gb|EHD52290.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 6901-05]
gi|353772094|gb|EHD52600.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA16531]
gi|353773807|gb|EHD54302.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 7286-06]
gi|353776982|gb|EHD57456.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41410]
gi|353777645|gb|EHD58117.1| 50S ribosomal protein L4 [Streptococcus pneumoniae NP070]
gi|353784478|gb|EHD64898.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA49447]
gi|353786626|gb|EHD67037.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41538]
gi|353788470|gb|EHD68867.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 5787-06]
gi|353791611|gb|EHD71985.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 6963-05]
gi|353793018|gb|EHD73388.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA18523]
gi|353801694|gb|EHD81996.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44511]
gi|353802683|gb|EHD82975.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA07643]
gi|353808359|gb|EHD88626.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13455]
gi|353808416|gb|EHD88682.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA11304]
gi|353810740|gb|EHD90990.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13494]
gi|353813891|gb|EHD94118.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13856]
gi|353816326|gb|EHD96535.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13637]
gi|353817944|gb|EHD98144.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA14798]
gi|353818625|gb|EHD98823.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA16121]
gi|353822557|gb|EHE02732.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA16242]
gi|353825732|gb|EHE05896.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA16833]
gi|353826509|gb|EHE06667.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17227]
gi|353830851|gb|EHE10980.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17328]
gi|353832998|gb|EHE13110.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17371]
gi|353836231|gb|EHE16319.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19077]
gi|353838746|gb|EHE18823.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19451]
gi|353843585|gb|EHE23629.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41437]
gi|353847018|gb|EHE27045.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41688]
gi|353850082|gb|EHE30086.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA43380]
gi|353854053|gb|EHE34033.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47360]
gi|353855599|gb|EHE35568.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47373]
gi|353858283|gb|EHE38243.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47388]
gi|353861054|gb|EHE40993.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47439]
gi|353863145|gb|EHE43074.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47688]
gi|353865680|gb|EHE45587.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47778]
gi|353866754|gb|EHE46650.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47976]
gi|353869004|gb|EHE48887.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA52306]
gi|353870703|gb|EHE50574.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA54644]
gi|353877101|gb|EHE56945.1| 50S ribosomal protein L4 [Streptococcus pneumoniae NP127]
gi|353877956|gb|EHE57795.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47751]
gi|353881618|gb|EHE61431.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 5185-06]
gi|353883309|gb|EHE63117.1| 50S ribosomal protein L4 [Streptococcus pneumoniae NP112]
gi|353884038|gb|EHE63840.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 3063-00]
gi|353890023|gb|EHE69790.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA08780]
gi|353891393|gb|EHE71149.1| 50S ribosomal protein L4 [Streptococcus pneumoniae EU-NP01]
gi|353894933|gb|EHE74673.1| 50S ribosomal protein L4 [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|353903925|gb|EHE79439.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA11426]
gi|353906266|gb|EHE81670.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13338]
gi|379137163|gb|AFC93954.1| 50S ribosomal protein L4 [Streptococcus pneumoniae ST556]
gi|379533491|gb|EHY98704.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA02254]
gi|379533957|gb|EHY99169.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA02270]
gi|379535381|gb|EHZ00585.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA02714]
gi|379537879|gb|EHZ03060.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13499]
gi|379541816|gb|EHZ06981.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA05245]
gi|379547440|gb|EHZ12577.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA05248]
gi|379547879|gb|EHZ13014.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA07914]
gi|379553749|gb|EHZ18832.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA11856]
gi|379560049|gb|EHZ25075.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13723]
gi|379560684|gb|EHZ25706.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA14373]
gi|379562119|gb|EHZ27133.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA14688]
gi|379567677|gb|EHZ32660.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA18068]
gi|379568408|gb|EHZ33388.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17719]
gi|379571567|gb|EHZ36524.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19923]
gi|379581940|gb|EHZ46823.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA40410]
gi|379582662|gb|EHZ47540.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA40563]
gi|379582995|gb|EHZ47872.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA43257]
gi|379588628|gb|EHZ53468.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44128]
gi|379589872|gb|EHZ54711.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA43264]
gi|379590206|gb|EHZ55044.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44386]
gi|379596920|gb|EHZ61723.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47461]
gi|379603233|gb|EHZ68002.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47628]
gi|379607121|gb|EHZ71867.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA49194]
gi|379609829|gb|EHZ74566.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47794]
gi|379610466|gb|EHZ75197.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47760]
gi|379613449|gb|EHZ78161.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA49542]
gi|379615442|gb|EHZ80148.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 7879-04]
gi|379616805|gb|EHZ81498.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 8190-05]
gi|379619383|gb|EHZ84055.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 5652-06]
gi|379621094|gb|EHZ85743.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 7533-05]
gi|379624955|gb|EHZ89583.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 4075-00]
gi|379625381|gb|EHZ90008.1| 50S ribosomal protein L4 [Streptococcus pneumoniae EU-NP02]
gi|379628445|gb|EHZ93049.1| 50S ribosomal protein L4 [Streptococcus pneumoniae EU-NP03]
gi|379631077|gb|EHZ95657.1| 50S ribosomal protein L4 [Streptococcus pneumoniae EU-NP04]
gi|379636143|gb|EIA00701.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA05578]
gi|379638315|gb|EIA02860.1| 50S ribosomal protein L4 [Streptococcus pneumoniae England14-9]
gi|379639945|gb|EIA04484.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA02506]
gi|379642264|gb|EIA06796.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA08825]
gi|395575925|gb|EJG36485.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070035]
gi|395590863|gb|EJG51163.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070531]
gi|395591255|gb|EJG51551.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070425]
gi|395597240|gb|EJG57447.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2080076]
gi|395597453|gb|EJG57659.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2072047]
gi|395603983|gb|EJG64116.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2061617]
gi|395604328|gb|EJG64460.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2071004]
gi|395605194|gb|EJG65325.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2071247]
gi|395611080|gb|EJG71154.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2081685]
gi|395611904|gb|EJG71958.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2081074]
gi|395615207|gb|EJG75223.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2082239]
gi|395616501|gb|EJG76512.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2082170]
gi|395869313|gb|EJG80428.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPAR27]
gi|395870302|gb|EJG81415.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPAR48]
gi|395872531|gb|EJG83629.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPAR95]
gi|395874921|gb|EJG86002.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA52612]
gi|395877428|gb|EJG88497.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPAR55]
gi|395883132|gb|EJG94175.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17301]
gi|395884431|gb|EJG95469.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA04216]
gi|395888342|gb|EJG99353.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA60190]
gi|395891009|gb|EJH02012.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA58771]
gi|395896241|gb|EJH07208.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA56113]
gi|395897560|gb|EJH08519.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA58581]
gi|395901036|gb|EJH11973.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19998]
gi|395902889|gb|EJH13821.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17484]
gi|395910126|gb|EJH21000.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA60132]
gi|395915167|gb|EJH26007.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47562]
gi|406368655|gb|AFS42345.1| 50S ribosomal protein L4 [Streptococcus pneumoniae gamPNI0373]
gi|444248489|gb|ELU54995.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PCS8203]
gi|444249525|gb|ELU56014.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PCS8106]
gi|444254493|gb|ELU60926.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PCS125219]
gi|444257092|gb|ELU63430.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PCS70012]
gi|444258947|gb|ELU65264.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0002]
gi|444261913|gb|ELU68211.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0006]
gi|444263666|gb|ELU69817.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PCS81218]
gi|444267807|gb|ELU73696.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0008]
gi|444269865|gb|ELU75662.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0007]
gi|444270647|gb|ELU76398.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0010]
gi|444272814|gb|ELU78501.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0153]
gi|444276368|gb|ELU81930.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0009]
gi|444280295|gb|ELU85666.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0076]
gi|444283376|gb|ELU88574.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0199]
gi|444283487|gb|ELU88684.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0360]
gi|444284159|gb|ELU89321.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0427]
gi|444288973|gb|ELU93861.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0446]
Length = 207
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL+ VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGQVVLSDAVFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRSPQ 82
>gi|415718754|ref|ZP_11467560.1| 50S ribosomal protein L4 [Gardnerella vaginalis 1500E]
gi|415726163|ref|ZP_11470664.1| 50S ribosomal protein L4 [Gardnerella vaginalis 00703Dmash]
gi|388059796|gb|EIK82514.1| 50S ribosomal protein L4 [Gardnerella vaginalis 1500E]
gi|388064036|gb|EIK86604.1| 50S ribosomal protein L4 [Gardnerella vaginalis 00703Dmash]
Length = 221
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVF-----DVPIRKDIIHRVVRWQLAKRQQGTHSTKTIS 152
++ + VT+ + G + ++F DV ++H+VV QLA +QGTH+ K +
Sbjct: 3 NVTLNVTDTKGKASGTVEAPAEIFGISNEDVLAHGPLVHQVVIAQLAAARQGTHAVKNRA 62
Query: 153 EVSGTGKKPWRQKGTGRARHGTLRGPQGWYY 183
VSG GKKPW+QKGTGRAR G++R PQ W +
Sbjct: 63 NVSGGGKKPWKQKGTGRARQGSIRAPQ-WVH 92
>gi|358459776|ref|ZP_09169970.1| ribosomal protein L4/L1e [Frankia sp. CN3]
gi|357076965|gb|EHI86430.1| ribosomal protein L4/L1e [Frankia sp. CN3]
Length = 230
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + G L G++FDV + +IH+VV Q A +QGTH TKT EV G GKK
Sbjct: 16 VTVHALAGGEAGTAELPGEIFDVQVNVPLIHQVVVAQQAAARQGTHDTKTRGEVRGGGKK 75
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G+ R PQ
Sbjct: 76 PYRQKGTGRARQGSTRAPQ 94
>gi|196006758|ref|XP_002113245.1| hypothetical protein TRIADDRAFT_27010 [Trichoplax adhaerens]
gi|190583649|gb|EDV23719.1| hypothetical protein TRIADDRAFT_27010, partial [Trichoplax
adhaerens]
Length = 220
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 125 IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+R DI+HR V WQLAKR+ GT TK EV G G+KPW QKG+GRAR G++R P
Sbjct: 1 LRIDILHRYVVWQLAKRRAGTAKTKNRGEVRGGGRKPWPQKGSGRARQGSIRAPH 55
>gi|421208093|ref|ZP_15665118.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070005]
gi|421224088|ref|ZP_15680834.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070768]
gi|395576563|gb|EJG37117.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070005]
gi|395591424|gb|EJG51719.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070768]
Length = 207
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL+ VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGQVVLSDAVFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRSPQ 82
>gi|415727969|ref|ZP_11471572.1| 50S ribosomal protein L4 [Gardnerella vaginalis 6119V5]
gi|388065495|gb|EIK87977.1| 50S ribosomal protein L4 [Gardnerella vaginalis 6119V5]
Length = 221
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVF-----DVPIRKDIIHRVVRWQLAKRQQGTHSTKTIS 152
++ + VT+ + G + ++F DV ++H+VV QLA +QGTH+ K +
Sbjct: 3 NVTLNVTDTKGKASGTVEAPAEIFGISNEDVLAHGPLVHQVVIAQLAAARQGTHAVKNRA 62
Query: 153 EVSGTGKKPWRQKGTGRARHGTLRGPQGWYY 183
VSG GKKPW+QKGTGRAR G++R PQ W +
Sbjct: 63 NVSGGGKKPWKQKGTGRARQGSIRAPQ-WVH 92
>gi|338707689|ref|YP_004661890.1| 50S ribosomal protein L4/L1e [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
gi|336294493|gb|AEI37600.1| ribosomal protein L4/L1e [Zymomonas mobilis subsp. pomaceae ATCC
29192]
Length = 208
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + KG + L VFDV R DI+HRVV WQL KR+ T +T+ ++V+ TGKK
Sbjct: 3 VEVQSLDASQKGSIELNDAVFDVEPRADILHRVVTWQLEKRRAPTRATRERADVARTGKK 62
Query: 161 PWRQKGTGRARHGTLRGP----QGWYYNARSKAQKPCY 194
RQKG G ARHG R P G + AR++ P
Sbjct: 63 FGRQKGGGTARHGDRRAPIFIGGGKAHGARARVFNPSL 100
>gi|315222819|ref|ZP_07864705.1| ribosomal protein L4/L1 family protein [Streptococcus anginosus
F0211]
gi|418962820|ref|ZP_13514670.1| 50S ribosomal protein L4 [Streptococcus anginosus subsp. whileyi
CCUG 39159]
gi|418966151|ref|ZP_13517900.1| 50S ribosomal protein L4 [Streptococcus constellatus subsp.
constellatus SK53]
gi|423069701|ref|ZP_17058486.1| 50S ribosomal protein L4 [Streptococcus intermedius F0395]
gi|423071652|ref|ZP_17060425.1| 50S ribosomal protein L4 [Streptococcus intermedius F0413]
gi|424788622|ref|ZP_18215373.1| 50S ribosomal protein L4 [Streptococcus intermedius BA1]
gi|315188122|gb|EFU21851.1| ribosomal protein L4/L1 family protein [Streptococcus anginosus
F0211]
gi|355363426|gb|EHG11163.1| 50S ribosomal protein L4 [Streptococcus intermedius F0413]
gi|355364123|gb|EHG11857.1| 50S ribosomal protein L4 [Streptococcus intermedius F0395]
gi|383340805|gb|EID19093.1| 50S ribosomal protein L4 [Streptococcus constellatus subsp.
constellatus SK53]
gi|383345023|gb|EID23168.1| 50S ribosomal protein L4 [Streptococcus anginosus subsp. whileyi
CCUG 39159]
gi|422112607|gb|EKU16390.1| 50S ribosomal protein L4 [Streptococcus intermedius BA1]
Length = 207
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDAVFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRSPQ 82
>gi|315925255|ref|ZP_07921469.1| 50S ribosomal protein L4 [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621489|gb|EFV01456.1| 50S ribosomal protein L4 [Pseudoramibacter alactolyticus ATCC
23263]
Length = 206
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L+ VF + + ++H+VV QLA ++QGT TKT SEV G G+KPWRQKGTGRAR G+
Sbjct: 19 LSDRVFGIEPNEPVVHQVVVAQLANKRQGTKGTKTRSEVRGGGRKPWRQKGTGRARAGSS 78
Query: 176 RGP 178
R P
Sbjct: 79 RSP 81
>gi|387823809|ref|YP_005823280.1| 50S ribosomal protein L4 [Francisella cf. novicida 3523]
gi|328675408|gb|AEB28083.1| LSU ribosomal protein L4p (L1e) [Francisella cf. novicida 3523]
Length = 207
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + + ++ G + +A VF + +IH+VV +A +QGT + KT SEVSG G K
Sbjct: 3 LNIKSLAGQEAGSLGVAEGVFAADYNEALIHQVVVAYMAGARQGTKAQKTRSEVSGGGAK 62
Query: 161 PWRQKGTGRARHGTLRGP 178
PWRQKGTGRAR GT+R P
Sbjct: 63 PWRQKGTGRARAGTIRSP 80
>gi|339626626|ref|YP_004718269.1| 50S ribosomal protein L4 [Sulfobacillus acidophilus TPY]
gi|379006078|ref|YP_005255529.1| 50S ribosomal protein L4 [Sulfobacillus acidophilus DSM 10332]
gi|339284415|gb|AEJ38526.1| 50S ribosomal protein L4 [Sulfobacillus acidophilus TPY]
gi|361052340|gb|AEW03857.1| ribosomal protein L4/L1e [Sulfobacillus acidophilus DSM 10332]
Length = 208
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P N +N E G M L+ VF VP ++H+V+ A R+ GT +TKT + V G
Sbjct: 1 MPNVNVYNLAGEVVGQMELSDAVFSVPANPALLHQVIVAYEANRRAGTAATKTRANVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQGWYY 183
G+KPWRQKGTGRAR G+ R P W +
Sbjct: 61 GRKPWRQKGTGRARAGSTRAPH-WRH 85
>gi|7674307|sp|Q9ZI49.1|RL4_AQUPY RecName: Full=50S ribosomal protein L4
gi|4165866|gb|AAD08786.1| ribosomal protein L4 [Aquifex pyrophilus]
Length = 199
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 44/55 (80%)
Query: 119 DVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 173
DVF+V ++K ++ VV+WQLAKR+QGTHSTKT EV+ +G+K QKGTG ARHG
Sbjct: 11 DVFNVKVKKHVLWEVVKWQLAKRRQGTHSTKTRGEVAYSGRKILPQKGTGNARHG 65
>gi|254875935|ref|ZP_05248645.1| 50S ribosomal protein L4/L1 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254841956|gb|EET20370.1| 50S ribosomal protein L4/L1 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 207
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 46/69 (66%)
Query: 110 DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGR 169
+ G + +A VF + +IH+VV +A +QGT + KT SEVSG G KPWRQKGTGR
Sbjct: 12 EAGVVGVAEGVFAADYNESLIHQVVVAYMAGARQGTKAQKTRSEVSGGGAKPWRQKGTGR 71
Query: 170 ARHGTLRGP 178
AR GT+R P
Sbjct: 72 ARAGTIRSP 80
>gi|157816923|ref|NP_001102224.1| 39S ribosomal protein L4, mitochondrial [Rattus norvegicus]
gi|149020531|gb|EDL78336.1| mitochondrial ribosomal protein L4 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 294
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 49/82 (59%)
Query: 97 QDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSG 156
Q V + F E G L DVF R DI+H+V WQ ++ TKT +EVSG
Sbjct: 63 QAWVESLRGFEQERIGLAELHPDVFATTPRLDILHQVAVWQRNFKRISYAKTKTRAEVSG 122
Query: 157 TGKKPWRQKGTGRARHGTLRGP 178
G+KPW+QKG+GRARHG++R P
Sbjct: 123 GGRKPWQQKGSGRARHGSIRSP 144
>gi|410459931|ref|ZP_11313620.1| 50S ribosomal protein L4 [Bacillus azotoformans LMG 9581]
gi|409928042|gb|EKN65166.1| 50S ribosomal protein L4 [Bacillus azotoformans LMG 9581]
Length = 207
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N+ G + L+ VF + +++ + Q A R+QGTH K SEVSG
Sbjct: 1 MPKVALYNQAGSQVGEIELSDAVFGIEPNNNVLFDAIIMQRATRRQGTHKVKNRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQ 82
>gi|392429440|ref|YP_006470454.1| 50S ribosomal protein L4 [Streptococcus intermedius JTH08]
gi|419776742|ref|ZP_14302661.1| 50S ribosomal protein L4 [Streptococcus intermedius SK54]
gi|383845427|gb|EID82830.1| 50S ribosomal protein L4 [Streptococcus intermedius SK54]
gi|391758589|dbj|BAM24206.1| 50S ribosomal protein L4 [Streptococcus intermedius JTH08]
Length = 207
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDAVFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRSPQ 82
>gi|383753516|ref|YP_005432419.1| putative 50S ribosomal protein L4 [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365568|dbj|BAL82396.1| putative 50S ribosomal protein L4 [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 207
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + N+ G + L ++F V + ++H+ V QLA ++ GTH+TKT S V G G+K
Sbjct: 4 VAVYDITNKQVGDIELNDNIFGVEMNAGLLHQAVVMQLAAQRLGTHATKTRSFVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
PW+QKGTGRAR G+ R P
Sbjct: 64 PWKQKGTGRARAGSTRSP 81
>gi|377809992|ref|YP_005005213.1| 50S ribosomal protein L4 [Pediococcus claussenii ATCC BAA-344]
gi|361056733|gb|AEV95537.1| 50S ribosomal protein L4 [Pediococcus claussenii ATCC BAA-344]
Length = 207
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 104 TNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ F +D G + L D+F + +++ V Q A +QGTH+ K S V G GKK
Sbjct: 4 VSLFKQDGSQNGDVELNADIFGIEPNDNVVFEAVVMQRASMRQGTHAVKNRSAVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PWRQKGTGRAR G++R PQ
Sbjct: 64 PWRQKGTGRARQGSIRSPQ 82
>gi|167626805|ref|YP_001677305.1| 50S ribosomal protein L4 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189029504|sp|B0U0Y8.1|RL4_FRAP2 RecName: Full=50S ribosomal protein L4
gi|167596806|gb|ABZ86804.1| 50S ribosomal protein L4 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 207
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 46/69 (66%)
Query: 110 DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGR 169
+ G + +A VF + +IH+VV +A +QGT + KT SEVSG G KPWRQKGTGR
Sbjct: 12 EAGVVGVAEGVFAADYNESLIHQVVVAYMAGARQGTKAQKTRSEVSGGGAKPWRQKGTGR 71
Query: 170 ARHGTLRGP 178
AR GT+R P
Sbjct: 72 ARAGTIRSP 80
>gi|223983922|ref|ZP_03634082.1| hypothetical protein HOLDEFILI_01363 [Holdemania filiformis DSM
12042]
gi|223964114|gb|EEF68466.1| hypothetical protein HOLDEFILI_01363 [Holdemania filiformis DSM
12042]
Length = 209
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFN-EDKGF--MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P N +N E K + LA VF + + ++ + Q A +QGTH TK+ EVSG
Sbjct: 1 MPKLNVYNLEAKEIREIELAEAVFGIEPNQQVMFDALIMQRANMRQGTHDTKSRHEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
GKKPWRQKGTGRAR G++R PQ
Sbjct: 61 GKKPWRQKGTGRARQGSIRAPQ 82
>gi|297242967|ref|ZP_06926905.1| ribosomal protein L4 [Gardnerella vaginalis AMD]
gi|415709573|ref|ZP_11463198.1| 50S ribosomal protein L4 [Gardnerella vaginalis 6420B]
gi|296889178|gb|EFH27912.1| ribosomal protein L4 [Gardnerella vaginalis AMD]
gi|388056245|gb|EIK79121.1| 50S ribosomal protein L4 [Gardnerella vaginalis 6420B]
Length = 221
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 122 DVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQGW 181
DV ++H+VV QLA +QGTH+ K + VSG GKKPW+QKGTGRAR G++R PQ W
Sbjct: 32 DVLAHGPLVHQVVIAQLAAARQGTHAVKNRANVSGGGKKPWKQKGTGRARQGSIRAPQ-W 90
Query: 182 YY 183
+
Sbjct: 91 VH 92
>gi|251799641|ref|YP_003014372.1| 50S ribosomal protein L4 [Paenibacillus sp. JDR-2]
gi|247547267|gb|ACT04286.1| ribosomal protein L4/L1e [Paenibacillus sp. JDR-2]
Length = 207
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 47/79 (59%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + LA VF + ++H V Q A + GTH TK SEV G G+K
Sbjct: 4 VTVFNVSGSEVGEIELADSVFGIEPNSHVLHSAVLLQQAAERAGTHKTKGRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PW+QKGTGRAR G++R PQ
Sbjct: 64 PWKQKGTGRARQGSIRSPQ 82
>gi|160932200|ref|ZP_02079591.1| hypothetical protein CLOLEP_01035 [Clostridium leptum DSM 753]
gi|156868802|gb|EDO62174.1| 50S ribosomal protein L4 [Clostridium leptum DSM 753]
Length = 207
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + ++ G + L+ VF + ++H VV LA ++QGT S T SEVSG GKK
Sbjct: 4 VAVFDVTGKEVGKIDLSDAVFGIEPNAVVMHEVVVNYLANQRQGTQSALTRSEVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PWRQKGTG AR G+ R PQ W + A KP
Sbjct: 64 PWRQKGTGHARQGSTRAPQ-WTHGGIVFAPKP 94
>gi|15605617|ref|NP_212990.1| 50S ribosomal protein L4 [Aquifex aeolicus VF5]
gi|6647723|sp|O66432.1|RL4_AQUAE RecName: Full=50S ribosomal protein L4
gi|2982768|gb|AAC06394.1| ribosomal protein L04 [Aquifex aeolicus VF5]
Length = 199
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 44/55 (80%)
Query: 119 DVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 173
DVF+V ++K ++ VV+WQLAKR+QGTHSTKT EV+ +G+K QKGTG ARHG
Sbjct: 11 DVFNVKVKKHVLWEVVKWQLAKRRQGTHSTKTRGEVAYSGRKILPQKGTGNARHG 65
>gi|335031215|ref|ZP_08524667.1| 50S ribosomal protein L4 [Streptococcus anginosus SK52 = DSM 20563]
gi|333770269|gb|EGL47318.1| 50S ribosomal protein L4 [Streptococcus anginosus SK52 = DSM 20563]
Length = 207
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDAVFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRSPQ 82
>gi|117924156|ref|YP_864773.1| 50S ribosomal protein L4P [Magnetococcus marinus MC-1]
gi|166234681|sp|A0L5X4.1|RL4_MAGSM RecName: Full=50S ribosomal protein L4
gi|117607912|gb|ABK43367.1| LSU ribosomal protein L4P [Magnetococcus marinus MC-1]
Length = 207
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 49/79 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+PV + N++ L VF IR D++ V +QLAKR+ GT + S+V G GKK
Sbjct: 4 VPVKDANNQEVRSTELNESVFGREIRADLLGMAVNYQLAKRRLGTATVLGRSDVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTG AR GT+R PQ
Sbjct: 64 PYRQKGTGNARQGTIRAPQ 82
>gi|421490226|ref|ZP_15937600.1| 50S ribosomal protein L4 [Streptococcus anginosus SK1138]
gi|400373631|gb|EJP26559.1| 50S ribosomal protein L4 [Streptococcus anginosus SK1138]
Length = 207
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDAVFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRSPQ 82
>gi|319940059|ref|ZP_08014413.1| 50S ribosomal protein L4 [Streptococcus anginosus 1_2_62CV]
gi|319810773|gb|EFW07100.1| 50S ribosomal protein L4 [Streptococcus anginosus 1_2_62CV]
Length = 207
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDAVFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRSPQ 82
>gi|297618383|ref|YP_003703542.1| 50S ribosomal protein L4/L1e [Syntrophothermus lipocalidus DSM
12680]
gi|297146220|gb|ADI02977.1| ribosomal protein L4/L1e [Syntrophothermus lipocalidus DSM 12680]
Length = 208
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+P+ N G + L+ +VF + + +H+VV+ QLA + GT +TKT EV G G+K
Sbjct: 4 VPLYNMNGTQVGEIELSDEVFGIEPNQAAMHQVVKMQLANHRVGTAATKTRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGP 178
P+RQKGTGRAR G++R P
Sbjct: 64 PYRQKGTGRARAGSIRSP 81
>gi|406578167|ref|ZP_11053708.1| 50S ribosomal protein L4 [Streptococcus sp. GMD6S]
gi|404458044|gb|EKA04510.1| 50S ribosomal protein L4 [Streptococcus sp. GMD6S]
Length = 207
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGQVVLNDAVFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRSPQ 82
>gi|256544507|ref|ZP_05471880.1| 50S ribosomal protein L4 [Anaerococcus vaginalis ATCC 51170]
gi|256399832|gb|EEU13436.1| 50S ribosomal protein L4 [Anaerococcus vaginalis ATCC 51170]
Length = 207
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E+ G + L +F I + ++ V+ QLA ++QGT S KT +EV G G+K
Sbjct: 4 VEVLNIKGENVGEIELNETLFAAEIAETAVYDTVKNQLANKRQGTQSAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQ 179
P+RQKGTGRAR G++R P
Sbjct: 64 PFRQKGTGRARQGSIRAPH 82
>gi|119383512|ref|YP_914568.1| 50S ribosomal protein L4 [Paracoccus denitrificans PD1222]
gi|166234698|sp|A1B028.1|RL4_PARDP RecName: Full=50S ribosomal protein L4
gi|119373279|gb|ABL68872.1| LSU ribosomal protein L4P [Paracoccus denitrificans PD1222]
Length = 206
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 47/67 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ D+F + R D++HRVVRWQ AK Q GTHS S+VS + KK +RQKGTG AR
Sbjct: 14 GDIDLSDDIFGLEPRADLLHRVVRWQRAKAQAGTHSVLGKSDVSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGP 178
HG+ + P
Sbjct: 74 HGSRKAP 80
>gi|254463733|ref|ZP_05077144.1| ribosomal protein L4/L1 family [Rhodobacterales bacterium Y4I]
gi|206684641|gb|EDZ45123.1| ribosomal protein L4/L1 family [Rhodobacterales bacterium Y4I]
Length = 205
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 44/67 (65%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ D+F + R DI+HRVVRWQ QQGTH KT SE S + KK +RQKGTG AR
Sbjct: 14 GDIELSEDLFGLEPRADILHRVVRWQRNNAQQGTHKVKTRSETSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGP 178
HG P
Sbjct: 74 HGDRNAP 80
>gi|229917357|ref|YP_002886003.1| 50S ribosomal protein L4 [Exiguobacterium sp. AT1b]
gi|259491559|sp|C4KZP5.1|RL4_EXISA RecName: Full=50S ribosomal protein L4
gi|229468786|gb|ACQ70558.1| ribosomal protein L4/L1e [Exiguobacterium sp. AT1b]
Length = 207
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + LA +F + + +++ + Q A R+QGTH TK SEV G G+KPW+QKGTGRAR
Sbjct: 15 GEIELAEAIFGIEPNESVLYDAIVMQQASRRQGTHDTKGRSEVRGGGRKPWKQKGTGRAR 74
Query: 172 HGTLRGPQ 179
G++R PQ
Sbjct: 75 QGSIRSPQ 82
>gi|54113207|gb|AAV29237.1| NT02FT0099 [synthetic construct]
Length = 207
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 47/70 (67%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G + +A VF + +IH+VV +A +QGT + KT SEVSG G KPWRQKGTG
Sbjct: 11 QEAGSLGVAEGVFAADYNEALIHQVVVAYMAGARQGTKAQKTRSEVSGGGAKPWRQKGTG 70
Query: 169 RARHGTLRGP 178
RAR GT+R P
Sbjct: 71 RARAGTIRSP 80
>gi|195952644|ref|YP_002120934.1| 50S ribosomal protein L4 [Hydrogenobaculum sp. Y04AAS1]
gi|226730675|sp|B4U745.1|RL4_HYDS0 RecName: Full=50S ribosomal protein L4
gi|195932256|gb|ACG56956.1| ribosomal protein L4/L1e [Hydrogenobaculum sp. Y04AAS1]
Length = 200
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 44/58 (75%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 173
L DVF+V +K I+ VVRWQLAKR+QGTHSTKT +EV+ + KK QKGTG ARHG
Sbjct: 8 LRDDVFNVEPKKHILWDVVRWQLAKRRQGTHSTKTRAEVNCSKKKIMPQKGTGNARHG 65
>gi|213965010|ref|ZP_03393209.1| ribosomal protein L4/L1 family protein [Corynebacterium amycolatum
SK46]
gi|213952546|gb|EEB63929.1| ribosomal protein L4/L1 family protein [Corynebacterium amycolatum
SK46]
Length = 215
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 44/69 (63%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
G + L VFD + ++H+VV Q A +QGTH KT EV G G+KPWRQKGTGRA
Sbjct: 16 NGSVELPASVFDAEVSIALMHQVVVAQRAAARQGTHKVKTRGEVRGGGRKPWRQKGTGRA 75
Query: 171 RHGTLRGPQ 179
R G++R P
Sbjct: 76 RQGSIRAPH 84
>gi|47212296|emb|CAF90559.1| unnamed protein product [Tetraodon nigroviridis]
Length = 302
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 45/71 (63%)
Query: 108 NEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGT 167
+E G L DVF VP R DI+H V WQ ++ TK +EV G G+KPWRQKG+
Sbjct: 83 SEPVGVAHLHPDVFAVPPRLDILHMVETWQRNFKRISHAHTKVRAEVRGGGRKPWRQKGS 142
Query: 168 GRARHGTLRGP 178
GRARHG++R P
Sbjct: 143 GRARHGSIRSP 153
>gi|341820709|emb|CCC57008.1| 50S ribosomal protein L4 [Weissella thailandensis fsh4-2]
Length = 207
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 106 FFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
F +D G + L VF V ++I V Q A +QGTH+ K S VSG GKKPW
Sbjct: 6 LFKQDGSNAGDIELNDSVFGVEPNNNVITDAVLMQRASMRQGTHAVKNRSAVSGGGKKPW 65
Query: 163 RQKGTGRARHGTLRGPQ 179
RQKGTGRAR G++R PQ
Sbjct: 66 RQKGTGRARQGSIRSPQ 82
>gi|307214236|gb|EFN89342.1| 39S ribosomal protein L4, mitochondrial [Harpegnathos saltator]
Length = 285
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 43/67 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
GF+ L +F R DIIH+ VRWQ R TKT +EV G G+KPW QKGTGRAR
Sbjct: 70 GFVTLHPHIFAATPRIDIIHQNVRWQKMYRWVCYAHTKTRTEVRGGGRKPWPQKGTGRAR 129
Query: 172 HGTLRGP 178
HG++R P
Sbjct: 130 HGSIRSP 136
>gi|187251821|ref|YP_001876303.1| 50S ribosomal protein L4/L1e [Elusimicrobium minutum Pei191]
gi|186971981|gb|ACC98966.1| Ribosomal protein L4/L1e [Elusimicrobium minutum Pei191]
Length = 211
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V N +++G L +F +H VV LA +++GT KT +EVSGTGKKPW
Sbjct: 5 VFNIQGKEEGTTALPEVLFSAKPNPTFLHEVVTAFLANQRRGTADVKTRAEVSGTGKKPW 64
Query: 163 RQKGTGRARHGTLRGP 178
+QKGTGRARHG++R P
Sbjct: 65 KQKGTGRARHGSMRSP 80
>gi|22547136|ref|NP_057040.2| 39S ribosomal protein L4, mitochondrial isoform a [Homo sapiens]
gi|22547138|ref|NP_666499.1| 39S ribosomal protein L4, mitochondrial isoform a [Homo sapiens]
gi|74733471|sp|Q9BYD3.1|RM04_HUMAN RecName: Full=39S ribosomal protein L4, mitochondrial; Short=L4mt;
Short=MRP-L4
gi|13559361|dbj|BAB40840.1| mitochondrial ribosomal protein L4 (L4mt) [Homo sapiens]
gi|14602670|gb|AAH09858.1| Mitochondrial ribosomal protein L4 [Homo sapiens]
gi|119604489|gb|EAW84083.1| mitochondrial ribosomal protein L4, isoform CRA_a [Homo sapiens]
gi|119604490|gb|EAW84084.1| mitochondrial ribosomal protein L4, isoform CRA_a [Homo sapiens]
Length = 311
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Query: 53 GLSFLASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKG 112
GLS LA T + P +L K + P + Q V + F E G
Sbjct: 20 GLSSLAEEAARATENPEQVASEGLPEPVLRKVELPVPTHRRPV-QAWVESLRGFEQERVG 78
Query: 113 FMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARH 172
L DVF R DI+H+V WQ ++ TKT +EV G G+KPW QKGTGRARH
Sbjct: 79 LADLHPDVFATAPRLDILHQVAMWQKNFKRISYAKTKTRAEVRGGGRKPWPQKGTGRARH 138
Query: 173 GTLRGP 178
G++R P
Sbjct: 139 GSIRSP 144
>gi|332852922|ref|XP_001164062.2| PREDICTED: 39S ribosomal protein L4, mitochondrial isoform 5 [Pan
troglodytes]
gi|410206720|gb|JAA00579.1| mitochondrial ribosomal protein L4 [Pan troglodytes]
gi|410253658|gb|JAA14796.1| mitochondrial ribosomal protein L4 [Pan troglodytes]
gi|410305182|gb|JAA31191.1| mitochondrial ribosomal protein L4 [Pan troglodytes]
gi|410332115|gb|JAA35004.1| mitochondrial ribosomal protein L4 [Pan troglodytes]
Length = 311
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Query: 53 GLSFLASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKG 112
GLS LA T + P +L K + P + Q V + F E G
Sbjct: 20 GLSSLAEEAARATENPEQVASEGLPEPVLRKVELPVPTHRRPV-QAWVESLRGFEQERVG 78
Query: 113 FMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARH 172
L DVF R DI+H+V WQ ++ TKT +EV G G+KPW QKGTGRARH
Sbjct: 79 LADLHPDVFATAPRLDILHQVAMWQKNFKRISYAKTKTRAEVRGGGRKPWPQKGTGRARH 138
Query: 173 GTLRGP 178
G++R P
Sbjct: 139 GSIRSP 144
>gi|451980684|ref|ZP_21929070.1| 50S ribosomal protein L4 [Nitrospina gracilis 3/211]
gi|451762020|emb|CCQ90309.1| 50S ribosomal protein L4 [Nitrospina gracilis 3/211]
Length = 208
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHST-KTISEVSGTGK 159
+ + N N+ G L+ +VF+ P+R+ ++ + V QLA ++ GT ST + ++SG GK
Sbjct: 4 LEIVNTENKKVGTATLSPEVFEGPVREHLVQQYVVMQLATKRSGTASTIENRGDISGGGK 63
Query: 160 KPWRQKGTGRARHGTLR 176
KPWRQKGTGRARHG+ R
Sbjct: 64 KPWRQKGTGRARHGSTR 80
>gi|241895186|ref|ZP_04782482.1| 50S ribosomal protein L4 [Weissella paramesenteroides ATCC 33313]
gi|241871492|gb|EER75243.1| 50S ribosomal protein L4 [Weissella paramesenteroides ATCC 33313]
Length = 207
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 106 FFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
F +D G + L VF V ++I V Q A +QGTH+ K S VSG GKKPW
Sbjct: 6 LFKQDGSNAGDIELNDSVFGVEPNNNVITDAVLMQRASMRQGTHAVKNRSAVSGGGKKPW 65
Query: 163 RQKGTGRARHGTLRGPQ 179
RQKGTGRAR G++R PQ
Sbjct: 66 RQKGTGRARQGSIRSPQ 82
>gi|452943479|ref|YP_007499644.1| ribosomal protein L4/L1e [Hydrogenobaculum sp. HO]
gi|452881897|gb|AGG14601.1| ribosomal protein L4/L1e [Hydrogenobaculum sp. HO]
Length = 200
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 44/58 (75%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 173
L DVF+V +K I+ VVRWQLAKR+QGTHSTKT +EV+ + KK QKGTG ARHG
Sbjct: 8 LRDDVFNVEPKKHILWDVVRWQLAKRRQGTHSTKTRAEVNCSKKKILPQKGTGNARHG 65
>gi|397476516|ref|XP_003809645.1| PREDICTED: 39S ribosomal protein L4, mitochondrial [Pan paniscus]
Length = 311
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Query: 53 GLSFLASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKG 112
GLS LA T + P +L K + P + Q V + F E G
Sbjct: 20 GLSSLAEEAARATENPEQVASEGLPEPVLRKVELPVPTHRRPV-QAWVESLRGFEQERVG 78
Query: 113 FMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARH 172
L DVF R DI+H+V WQ ++ TKT +EV G G+KPW QKGTGRARH
Sbjct: 79 LADLHPDVFATAPRLDILHQVAMWQKNFKRISYAKTKTRAEVRGGGRKPWPQKGTGRARH 138
Query: 173 GTLRGP 178
G++R P
Sbjct: 139 GSIRSP 144
>gi|172056141|ref|YP_001812601.1| 50S ribosomal protein L4 [Exiguobacterium sibiricum 255-15]
gi|407475994|ref|YP_006789871.1| 50S ribosomal protein L4 [Exiguobacterium antarcticum B7]
gi|226730665|sp|B1YGV1.1|RL4_EXIS2 RecName: Full=50S ribosomal protein L4
gi|171988662|gb|ACB59584.1| ribosomal protein L4/L1e [Exiguobacterium sibiricum 255-15]
gi|407060073|gb|AFS69263.1| 50S ribosomal protein L4 [Exiguobacterium antarcticum B7]
Length = 207
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + LA VF + + +++ + Q A R+QGTH TK SEV G G+KPW+QKGTGRAR
Sbjct: 15 GDIELADAVFGIEPNEAVVYDAIVMQQASRRQGTHDTKGRSEVRGGGRKPWKQKGTGRAR 74
Query: 172 HGTLRGPQ 179
G++R PQ
Sbjct: 75 QGSIRSPQ 82
>gi|406963070|gb|EKD89241.1| hypothetical protein ACD_34C00145G0019 [uncultured bacterium]
Length = 208
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + + L ++F+ PI D++H+ Q+A GTH TKT S V G G+K
Sbjct: 3 VEVLNMEGKKVSTLELPAEIFEAPINVDLMHQAFVRQMANAHLGTHETKTKSFVRGGGRK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
PW+QKGTGRAR G+ R Q
Sbjct: 63 PWKQKGTGRARQGSSRSAQ 81
>gi|342210668|ref|ZP_08703424.1| 50S ribosomal protein L4 [Mycoplasma anatis 1340]
gi|341579164|gb|EGS29305.1| 50S ribosomal protein L4 [Mycoplasma anatis 1340]
Length = 203
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 39/55 (70%)
Query: 125 IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
I + I V + A R+QGTH K +EVSGTGKKPWRQKGTGRAR G+LR PQ
Sbjct: 23 IYEQAIFDTVLSERASRRQGTHQVKNRAEVSGTGKKPWRQKGTGRARQGSLRSPQ 77
>gi|365851818|ref|ZP_09392233.1| 50S ribosomal protein L4 [Lactobacillus parafarraginis F0439]
gi|363715759|gb|EHL99182.1| 50S ribosomal protein L4 [Lactobacillus parafarraginis F0439]
Length = 207
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 106 FFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
F +D G + L +F + +++ V Q A R+QGTHS K S V G GKKPW
Sbjct: 6 LFKQDGSQNGTVSLNDSIFGIEPNNNVVFDAVVMQRASRRQGTHSVKNRSAVRGGGKKPW 65
Query: 163 RQKGTGRARHGTLRGPQ 179
RQKGTGRAR G++R PQ
Sbjct: 66 RQKGTGRARQGSIRSPQ 82
>gi|254995178|ref|ZP_05277368.1| 50S ribosomal protein L4 [Anaplasma marginale str. Mississippi]
gi|255003352|ref|ZP_05278316.1| 50S ribosomal protein L4 [Anaplasma marginale str. Puerto Rico]
gi|255004476|ref|ZP_05279277.1| 50S ribosomal protein L4 [Anaplasma marginale str. Virginia]
Length = 178
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%)
Query: 129 IIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
++ VV WQLAKR+ GTH T+ IS+VSGT KP+RQK TGRAR G+LR PQ
Sbjct: 1 MLRDVVTWQLAKRRAGTHKTRCISDVSGTTAKPYRQKHTGRARQGSLRSPQ 51
>gi|430755581|ref|YP_007211142.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|430020101|gb|AGA20707.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. subtilis str.
BSP1]
Length = 209
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 99 LVIPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVS 155
+++P +N++ G + L VF + + ++ + Q A +QGTH K SEV
Sbjct: 1 MIMPKVALYNQNGSTAGDIELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKNRSEVR 60
Query: 156 GTGKKPWRQKGTGRARHGTLRGPQ 179
G G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GGGRKPWRQKGTGRARQGSIRSPQ 84
>gi|389694571|ref|ZP_10182665.1| 50S ribosomal protein L4, bacterial/organelle [Microvirga sp.
WSM3557]
gi|388587957|gb|EIM28250.1| 50S ribosomal protein L4, bacterial/organelle [Microvirga sp.
WSM3557]
Length = 206
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 48/79 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T + G + L +F + R D++ R VRWQLAKRQ GTH+ K S++ T KK
Sbjct: 3 LDITTLEGGNAGSVDLNETIFGLEPRADLLARCVRWQLAKRQAGTHAVKNRSDIDRTTKK 62
Query: 161 PWRQKGTGRARHGTLRGPQ 179
++QKGTG ARHG PQ
Sbjct: 63 VYKQKGTGSARHGAASAPQ 81
>gi|408355487|ref|YP_006844018.1| 50S ribosomal protein L4 [Amphibacillus xylanus NBRC 15112]
gi|407726258|dbj|BAM46256.1| 50S ribosomal protein L4 [Amphibacillus xylanus NBRC 15112]
Length = 207
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N+ G + L VF + ++H V Q A ++QGTH+ K S VSG
Sbjct: 1 MPKLALYNQSGSQVGDIELNDAVFGIEPNTHVLHDAVVMQQASKRQGTHAVKNRSAVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQ 82
>gi|326436109|gb|EGD81679.1| hypothetical protein PTSG_02393 [Salpingoeca sp. ATCC 50818]
Length = 243
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 45/67 (67%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G M L VF +RKDI+ RVV +Q A + GT TKT SEV G GKKPW+QKGTGRAR
Sbjct: 38 GMMELDPTVFGEDLRKDILQRVVVFQRASWRAGTAKTKTRSEVRGGGKKPWQQKGTGRAR 97
Query: 172 HGTLRGP 178
++R P
Sbjct: 98 ASSIRSP 104
>gi|420143556|ref|ZP_14651053.1| 50S ribosomal protein L4 [Lactococcus garvieae IPLA 31405]
gi|391856427|gb|EIT66967.1| 50S ribosomal protein L4 [Lactococcus garvieae IPLA 31405]
Length = 208
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 104 TNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ F +D G + L VF + + ++ VV Q A +QGTH+ K S VSG GKK
Sbjct: 4 VSLFKQDGTQAGEVTLNDAVFGIEPNETVVFDVVLSQRASLRQGTHAHKNRSLVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ----GWYY--NARSKAQKPCYKVEQ 198
PWRQKGTGRAR G++R PQ G + N RS A K KV Q
Sbjct: 64 PWRQKGTGRARQGSIRSPQFRGGGTVFGPNPRSYAYKLPQKVRQ 107
>gi|259047554|ref|ZP_05737955.1| 50S ribosomal protein L4 [Granulicatella adiacens ATCC 49175]
gi|259035745|gb|EEW37000.1| 50S ribosomal protein L4 [Granulicatella adiacens ATCC 49175]
Length = 207
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 106 FFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
F +D G + L D+F + ++++ V Q A +QGTH+ K S VSG G+KPW
Sbjct: 6 LFKQDGTTNGEIELNSDIFGIEPNENVVFDAVIMQRASLRQGTHAVKNRSAVSGGGRKPW 65
Query: 163 RQKGTGRARHGTLRGPQ 179
RQKGTGRAR G++R PQ
Sbjct: 66 RQKGTGRARQGSIRSPQ 82
>gi|71891976|ref|YP_277706.1| 50S ribosomal protein L4 [Candidatus Blochmannia pennsylvanicus
str. BPEN]
gi|109893577|sp|Q493K7.1|RL4_BLOPB RecName: Full=50S ribosomal protein L4
gi|71796082|gb|AAZ40833.1| 50S ribosomal subunit protein L4 [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 210
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
++ ++F P + +IH+V+ L +QGT S K+ SEVSG+ KKPWRQKGTGRAR G++
Sbjct: 22 VSDEIFKCPFNQALIHQVISTYLTNSRQGTRSQKSRSEVSGSNKKPWRQKGTGRARSGSV 81
Query: 176 RGPQGWYYNARSKAQKP 192
+ P W + A KP
Sbjct: 82 KSP-IWRSGGVTFAAKP 97
>gi|422822250|ref|ZP_16870443.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK353]
gi|422852763|ref|ZP_16899427.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK160]
gi|324990001|gb|EGC21942.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK353]
gi|325697977|gb|EGD39860.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK160]
Length = 207
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDTVFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRSPQ 82
>gi|303284373|ref|XP_003061477.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456807|gb|EEH54107.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 252
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 98 DLVIPVTNFFNEDKG-FMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSG 156
D +PV G ++L G FD P+R D++HRVV WQ K ++G TKT EVSG
Sbjct: 1 DKTLPVFTIDGTPTGETLILPGRHFDQPLRVDLVHRVVHWQRNKARKGRKKTKTRGEVSG 60
Query: 157 TGKKPWRQKGTGRARHGTLRGPQ 179
T +K QKG GRAR G+LR PQ
Sbjct: 61 TTRKARPQKGGGRARVGSLRAPQ 83
>gi|440509770|ref|YP_007347206.1| 50S ribosomal protein L4 [Candidatus Blochmannia chromaiodes str.
640]
gi|440453983|gb|AGC03475.1| 50S ribosomal protein L4 [Candidatus Blochmannia chromaiodes str.
640]
Length = 210
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
++ ++F P + +IH+V+ L +QGT S K+ SEVSG+ KKPWRQKGTGRAR G++
Sbjct: 22 VSDEIFKCPFNQALIHQVISTYLTNSRQGTRSQKSRSEVSGSNKKPWRQKGTGRARSGSV 81
Query: 176 RGPQGWYYNARSKAQKP 192
+ P W + A KP
Sbjct: 82 KSP-IWRSGGVTFAAKP 97
>gi|335420824|ref|ZP_08551859.1| ribosomal protein L4/L1e [Salinisphaera shabanensis E1L3A]
gi|334894126|gb|EGM32333.1| ribosomal protein L4/L1e [Salinisphaera shabanensis E1L3A]
Length = 202
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 6/94 (6%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGP- 178
+F P KD++H++V LA + GT + K +EV G GKKPWRQKGTGRAR GT+R P
Sbjct: 18 IFARPFNKDLVHQIVTAYLAGARAGTKAQKNRAEVRGGGKKPWRQKGTGRARAGTIRSPI 77
Query: 179 ---QGWYYNA--RSKAQKPCYKVEQEGAAAWVED 207
G + A R AQK K+ + G +A V +
Sbjct: 78 WTGGGVTFAASPRDYAQKVNRKMYRAGMSAIVSE 111
>gi|222099968|ref|YP_002534536.1| 50S ribosomal protein L4 [Thermotoga neapolitana DSM 4359]
gi|254803761|sp|B9K887.1|RL4_THENN RecName: Full=50S ribosomal protein L4
gi|221572358|gb|ACM23170.1| 50S ribosomal protein L4 [Thermotoga neapolitana DSM 4359]
Length = 235
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E G + ++ VF++ D++ R V QL+ R+ GT STKT EVSG G+K
Sbjct: 4 VDLLNVKGEKVGTLEISDFVFNIDPNYDVMWRYVDMQLSNRRAGTASTKTRGEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PW QK TGRARHG++R P W + + KP
Sbjct: 64 PWPQKHTGRARHGSIRSPI-WRHGGVAHGPKP 94
>gi|407800499|ref|ZP_11147359.1| 50S ribosomal protein L4 [Oceaniovalibus guishaninsula JLT2003]
gi|407057418|gb|EKE43394.1| 50S ribosomal protein L4 [Oceaniovalibus guishaninsula JLT2003]
Length = 206
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 47/80 (58%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V + G + L ++F + R DI+HRVVRWQ QQGTH KT SE S +
Sbjct: 1 MKLDVITLDGGNAGSVDLGDEIFGLEPRADILHRVVRWQRNNAQQGTHKVKTRSETSYST 60
Query: 159 KKPWRQKGTGRARHGTLRGP 178
KK +RQKGTG ARHG P
Sbjct: 61 KKIYRQKGTGGARHGDRNAP 80
>gi|385261729|ref|ZP_10039846.1| 50S ribosomal protein L4 [Streptococcus sp. SK643]
gi|385192451|gb|EIF39856.1| 50S ribosomal protein L4 [Streptococcus sp. SK643]
Length = 207
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGQVVLNDAVFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRSPQ 82
>gi|372278262|ref|ZP_09514298.1| 50S ribosomal protein L4 [Oceanicola sp. S124]
Length = 205
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++F + R DI+HRVVRWQ K Q GTH T SEVS + KK +RQKGTG AR
Sbjct: 14 GSVDLGDEIFGLEPRADILHRVVRWQRNKAQAGTHKVLTKSEVSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGP---QGWYYNA---RSKAQKPCYKVEQEG 200
HG+ + P +G Y RS A + K + G
Sbjct: 74 HGSRKAPIFRKGGIYKGPTPRSHAHELTKKFRKLG 108
>gi|149203512|ref|ZP_01880482.1| 50S ribosomal protein L4 [Roseovarius sp. TM1035]
gi|149143345|gb|EDM31384.1| 50S ribosomal protein L4 [Roseovarius sp. TM1035]
Length = 205
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 43/67 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L D+F + R DI+HRVVRWQ K Q GTH KT SE S + KK +RQKGTG AR
Sbjct: 14 GSVDLGEDIFGLEPRADILHRVVRWQRNKAQAGTHKVKTRSETSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGP 178
HG P
Sbjct: 74 HGDKNAP 80
>gi|85703988|ref|ZP_01035091.1| 50S ribosomal protein L4 [Roseovarius sp. 217]
gi|85671308|gb|EAQ26166.1| 50S ribosomal protein L4 [Roseovarius sp. 217]
Length = 205
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 43/67 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L D+F + R DI+HRVVRWQ K Q GTH KT SE S + KK +RQKGTG AR
Sbjct: 14 GSVDLGEDIFGLEPRADILHRVVRWQRNKAQAGTHKVKTRSETSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGP 178
HG P
Sbjct: 74 HGDKNAP 80
>gi|329768274|ref|ZP_08259775.1| 50S ribosomal protein L4 [Gemella haemolysans M341]
gi|328837473|gb|EGF87102.1| 50S ribosomal protein L4 [Gemella haemolysans M341]
Length = 207
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + F +D G + + VF + + ++ + V Q A +QGTH TK SEVSG
Sbjct: 1 MPQLDLFKQDGTKVGAVEASEAVFGIEPNQHVLFQAVTLQRASLRQGTHKTKGRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQ 82
>gi|182678338|ref|YP_001832484.1| 50S ribosomal protein L4 [Beijerinckia indica subsp. indica ATCC
9039]
gi|226730620|sp|B2IK63.1|RL4_BEII9 RecName: Full=50S ribosomal protein L4
gi|182634221|gb|ACB94995.1| ribosomal protein L4/L1e [Beijerinckia indica subsp. indica ATCC
9039]
Length = 206
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I +T+ E G + L +F + R D+I R++R+QLAKR+ GTH + +++ TG
Sbjct: 1 MKIDITSVNGETAGSIDLDDAIFGLEPRVDLIARMIRYQLAKRRAGTHQSLGRADIHRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KK ++QKGTG ARHG+ R PQ
Sbjct: 61 KKMYKQKGTGSARHGSARAPQ 81
>gi|125716986|ref|YP_001034119.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK36]
gi|323350941|ref|ZP_08086599.1| 50S ribosomal protein L4 [Streptococcus sanguinis VMC66]
gi|401681287|ref|ZP_10813191.1| 50S ribosomal protein L4 [Streptococcus sp. AS14]
gi|422822937|ref|ZP_16871126.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK405]
gi|422825093|ref|ZP_16873272.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK678]
gi|422847985|ref|ZP_16894668.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK72]
gi|422850348|ref|ZP_16897018.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK150]
gi|422857191|ref|ZP_16903841.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1057]
gi|422861232|ref|ZP_16907874.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK330]
gi|422863734|ref|ZP_16910364.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK408]
gi|422864721|ref|ZP_16911346.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1058]
gi|422877761|ref|ZP_16924231.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1056]
gi|422880429|ref|ZP_16926892.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1059]
gi|422883160|ref|ZP_16929609.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK49]
gi|422929858|ref|ZP_16962798.1| 50S ribosomal protein L4 [Streptococcus sanguinis ATCC 29667]
gi|422930558|ref|ZP_16963489.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK340]
gi|166199916|sp|A3CK64.1|RL4_STRSV RecName: Full=50S ribosomal protein L4
gi|125496903|gb|ABN43569.1| 50S ribosomal protein L4, putative [Streptococcus sanguinis SK36]
gi|322122923|gb|EFX94629.1| 50S ribosomal protein L4 [Streptococcus sanguinis VMC66]
gi|324991816|gb|EGC23741.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK405]
gi|324996294|gb|EGC28202.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK678]
gi|325686406|gb|EGD28436.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK72]
gi|325695809|gb|EGD37706.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK150]
gi|327463722|gb|EGF10038.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1057]
gi|327467336|gb|EGF12836.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK330]
gi|327471741|gb|EGF17182.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK408]
gi|327490462|gb|EGF22244.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1058]
gi|332358878|gb|EGJ36700.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1056]
gi|332363752|gb|EGJ41532.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK49]
gi|332364033|gb|EGJ41811.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1059]
gi|339613690|gb|EGQ18421.1| 50S ribosomal protein L4 [Streptococcus sanguinis ATCC 29667]
gi|339621343|gb|EGQ25906.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK340]
gi|400187084|gb|EJO21286.1| 50S ribosomal protein L4 [Streptococcus sp. AS14]
Length = 207
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDAVFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRSPQ 82
>gi|377557611|ref|ZP_09787253.1| 50S ribosomal protein L4 [Gordonia otitidis NBRC 100426]
gi|377525306|dbj|GAB32418.1| 50S ribosomal protein L4 [Gordonia otitidis NBRC 100426]
Length = 228
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V E G + L ++FD P ++H+VV Q A +QGTH+TKT +VSG G
Sbjct: 9 LTLDVKTADGETNGTVDLPAEIFDAPANIALMHQVVVAQQAAARQGTHATKTRGQVSGGG 68
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KP+RQKGTGRAR G+ R PQ
Sbjct: 69 AKPYRQKGTGRARQGSTRAPQ 89
>gi|293364346|ref|ZP_06611072.1| 50S ribosomal protein L4 [Streptococcus oralis ATCC 35037]
gi|307702687|ref|ZP_07639639.1| 50S ribosomal protein L4 (BL4) [Streptococcus oralis ATCC 35037]
gi|307704066|ref|ZP_07640995.1| 50S ribosomal protein L4 (BL4) [Streptococcus mitis SK597]
gi|419781973|ref|ZP_14307784.1| 50S ribosomal protein L4 [Streptococcus oralis SK610]
gi|291317192|gb|EFE57619.1| 50S ribosomal protein L4 [Streptococcus oralis ATCC 35037]
gi|307622356|gb|EFO01364.1| 50S ribosomal protein L4 (BL4) [Streptococcus mitis SK597]
gi|307623803|gb|EFO02788.1| 50S ribosomal protein L4 (BL4) [Streptococcus oralis ATCC 35037]
gi|383183614|gb|EIC76149.1| 50S ribosomal protein L4 [Streptococcus oralis SK610]
Length = 207
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGQVVLNDAVFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRSPQ 82
>gi|422871944|ref|ZP_16918437.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1087]
gi|328945216|gb|EGG39370.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1087]
Length = 207
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDAVFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRSPQ 82
>gi|422856366|ref|ZP_16903023.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1]
gi|327458432|gb|EGF04788.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1]
Length = 207
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDAVFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRSPQ 82
>gi|294790412|ref|ZP_06755570.1| ribosomal protein L4/L1 family protein [Scardovia inopinata F0304]
gi|294458309|gb|EFG26662.1| ribosomal protein L4/L1 family protein [Scardovia inopinata F0304]
Length = 219
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVP---IRKDI--IHRVVRWQLAKRQQGTHSTKTIS 152
D+ + VT + G + ++F + +R I +H+VV QLA +QGTH+ K +
Sbjct: 3 DVSLKVTGLDGVEAGSVTAPEEIFGIAQDEVRTHIPLVHQVVVAQLAAARQGTHAVKNRA 62
Query: 153 EVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+SG GKKPW+QKGTGRAR G++R PQ
Sbjct: 63 RISGGGKKPWKQKGTGRARQGSIRAPQ 89
>gi|289706534|ref|ZP_06502884.1| ribosomal protein L4/L1 family protein [Micrococcus luteus SK58]
gi|289556669|gb|EFD50010.1| ribosomal protein L4/L1 family protein [Micrococcus luteus SK58]
Length = 211
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 44/61 (72%)
Query: 119 DVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGP 178
++FDV ++H+VV QLA +QGTH TK EVSG G+KP++QKGTGRAR G++R P
Sbjct: 16 ELFDVQSNVPLMHQVVVAQLAAARQGTHKTKRRGEVSGAGRKPFKQKGTGRARQGSIRAP 75
Query: 179 Q 179
Sbjct: 76 H 76
>gi|421765781|ref|ZP_16202562.1| LSU ribosomal protein L4p (L1e) [Lactococcus garvieae DCC43]
gi|407625866|gb|EKF52554.1| LSU ribosomal protein L4p (L1e) [Lactococcus garvieae DCC43]
Length = 208
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 104 TNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ F +D G + L VF + + ++ VV Q A +QGTH+ K S VSG GKK
Sbjct: 4 VSLFKQDGTQAGEVTLNDAVFGIEPNETVVFDVVLSQRASLRQGTHAHKNRSLVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQ----GWYY--NARSKAQKPCYKVEQ 198
PWRQKGTGRAR G++R PQ G + N RS A K KV Q
Sbjct: 64 PWRQKGTGRARQGSIRSPQFRGGGTVFGPNPRSYAYKLPQKVRQ 107
>gi|378719098|ref|YP_005283987.1| 50S ribosomal protein L4 [Gordonia polyisoprenivorans VH2]
gi|375753801|gb|AFA74621.1| 50S ribosomal protein L4 [Gordonia polyisoprenivorans VH2]
Length = 223
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 50/81 (61%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V N G + L D+FD P ++H+VV Q A +QGTH+TKT EV G G
Sbjct: 9 LTLDVRNADGTTNGTVELPADLFDAPANIALMHQVVVAQQAAARQGTHATKTRGEVRGGG 68
Query: 159 KKPWRQKGTGRARHGTLRGPQ 179
KP+RQKGTGRAR G+ R PQ
Sbjct: 69 AKPYRQKGTGRARQGSTRAPQ 89
>gi|159042833|ref|YP_001531627.1| 50S ribosomal protein L4 [Dinoroseobacter shibae DFL 12]
gi|189029501|sp|A8LM49.1|RL4_DINSH RecName: Full=50S ribosomal protein L4
gi|157910593|gb|ABV92026.1| 50S ribosomal protein L4/L1e [Dinoroseobacter shibae DFL 12]
Length = 205
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 47/80 (58%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V E G + L +F + R DI+HRVVRWQ K Q GTH KT SEVS +
Sbjct: 1 MKLDVIKLDGEAAGSVELDEALFGLEPRADILHRVVRWQRNKAQAGTHKVKTRSEVSYST 60
Query: 159 KKPWRQKGTGRARHGTLRGP 178
KK +RQKGTG ARHG P
Sbjct: 61 KKIYRQKGTGGARHGARSAP 80
>gi|452972597|gb|EME72426.1| 50S ribosomal protein L4 [Bacillus sonorensis L12]
Length = 207
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N++ G + L VF + + ++ + Q A +QGTH K SEVSG
Sbjct: 1 MPKVALYNQNGSTAGEIELNDSVFGIEPNESVVFDAILMQRASLRQGTHKVKNRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQ 82
>gi|148983608|ref|ZP_01816927.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP3-BS71]
gi|194397434|ref|YP_002036911.1| 50S ribosomal protein L4 [Streptococcus pneumoniae G54]
gi|221231114|ref|YP_002510266.1| 50S ribosomal protein L4 [Streptococcus pneumoniae ATCC 700669]
gi|270292001|ref|ZP_06198216.1| ribosomal protein L4 [Streptococcus sp. M143]
gi|306828784|ref|ZP_07461976.1| ribosomal protein L4/L1 family protein [Streptococcus mitis ATCC
6249]
gi|315612333|ref|ZP_07887246.1| ribosomal protein L4/L1 family protein [Streptococcus sanguinis
ATCC 49296]
gi|322375038|ref|ZP_08049552.1| ribosomal protein L4/L1 family protein [Streptococcus sp. C300]
gi|322377229|ref|ZP_08051721.1| ribosomal protein L4/L1 family protein [Streptococcus sp. M334]
gi|331267135|ref|YP_004326765.1| 50S ribosomal protein L4 [Streptococcus oralis Uo5]
gi|358465339|ref|ZP_09175289.1| 50S ribosomal protein L4 [Streptococcus sp. oral taxon 058 str.
F0407]
gi|387756770|ref|YP_006063749.1| 50S ribosomal protein L4 [Streptococcus pneumoniae OXC141]
gi|406587691|ref|ZP_11062539.1| 50S ribosomal protein L4 [Streptococcus sp. GMD1S]
gi|415696752|ref|ZP_11456394.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 459-5]
gi|415748587|ref|ZP_11476639.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SV35]
gi|415751313|ref|ZP_11478548.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SV36]
gi|417693135|ref|ZP_12342324.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47901]
gi|417916536|ref|ZP_12560113.1| 50S ribosomal protein L4 [Streptococcus mitis bv. 2 str. SK95]
gi|417933632|ref|ZP_12576952.1| 50S ribosomal protein L4 [Streptococcus mitis bv. 2 str. F0392]
gi|418073089|ref|ZP_12710352.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA11184]
gi|418104287|ref|ZP_12741347.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44500]
gi|418120328|ref|ZP_12757276.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44194]
gi|418122534|ref|ZP_12759469.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44378]
gi|418127116|ref|ZP_12764014.1| 50S ribosomal protein L4 [Streptococcus pneumoniae NP170]
gi|418136280|ref|ZP_12773124.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA11663]
gi|418165835|ref|ZP_12802493.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17971]
gi|418172615|ref|ZP_12809229.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41277]
gi|418177263|ref|ZP_12813848.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41565]
gi|418184001|ref|ZP_12820550.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47283]
gi|418215689|ref|ZP_12842415.1| 50S ribosomal protein L4 [Streptococcus pneumoniae
Netherlands15B-37]
gi|418231353|ref|ZP_12857942.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA07228]
gi|418235647|ref|ZP_12862216.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19690]
gi|419430658|ref|ZP_13970804.1| 50S ribosomal protein L4 [Streptococcus pneumoniae EU-NP05]
gi|419432862|ref|ZP_13972984.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA40183]
gi|419441647|ref|ZP_13981682.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13224]
gi|419463473|ref|ZP_14003369.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA04175]
gi|419468134|ref|ZP_14008007.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA06083]
gi|419472322|ref|ZP_14012175.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13430]
gi|419479109|ref|ZP_14018921.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19101]
gi|419490196|ref|ZP_14029938.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47179]
gi|419492384|ref|ZP_14032112.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47210]
gi|419496647|ref|ZP_14036359.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47522]
gi|419498805|ref|ZP_14038505.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47597]
gi|419509550|ref|ZP_14049195.1| 50S ribosomal protein L4 [Streptococcus pneumoniae NP141]
gi|419529340|ref|ZP_14068875.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA40028]
gi|419533661|ref|ZP_14073169.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17457]
gi|419767568|ref|ZP_14293718.1| 50S ribosomal protein L4 [Streptococcus mitis SK579]
gi|419778283|ref|ZP_14304176.1| 50S ribosomal protein L4 [Streptococcus oralis SK10]
gi|419781567|ref|ZP_14307385.1| 50S ribosomal protein L4 [Streptococcus oralis SK100]
gi|421212250|ref|ZP_15669216.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070108]
gi|421214474|ref|ZP_15671409.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070109]
gi|421280252|ref|ZP_15731051.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA04672]
gi|421288889|ref|ZP_15739641.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA54354]
gi|421297671|ref|ZP_15748366.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA60080]
gi|421304205|ref|ZP_15754863.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA62331]
gi|421308681|ref|ZP_15759312.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA62681]
gi|226730730|sp|B5E6F6.1|RL4_STRP4 RecName: Full=50S ribosomal protein L4
gi|254803756|sp|B8ZKF8.1|RL4_STRPJ RecName: Full=50S ribosomal protein L4
gi|74267363|dbj|BAE44179.1| ribosomal protein L4 [Streptococcus pneumoniae]
gi|147923755|gb|EDK74867.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP3-BS71]
gi|194357101|gb|ACF55549.1| 50S ribosomal protein L4 [Streptococcus pneumoniae G54]
gi|220673574|emb|CAR68060.1| 50S ribosomal protein L4 [Streptococcus pneumoniae ATCC 700669]
gi|270279529|gb|EFA25371.1| ribosomal protein L4 [Streptococcus sp. M143]
gi|301799359|emb|CBW31894.1| 50S ribosomal protein L4 [Streptococcus pneumoniae OXC141]
gi|304428962|gb|EFM32050.1| ribosomal protein L4/L1 family protein [Streptococcus mitis ATCC
6249]
gi|315315314|gb|EFU63353.1| ribosomal protein L4/L1 family protein [Streptococcus sanguinis
ATCC 49296]
gi|321280538|gb|EFX57577.1| ribosomal protein L4/L1 family protein [Streptococcus sp. C300]
gi|321281942|gb|EFX58950.1| ribosomal protein L4/L1 family protein [Streptococcus sp. M334]
gi|326683807|emb|CBZ01425.1| 50S ribosomal protein L4 [Streptococcus oralis Uo5]
gi|332204218|gb|EGJ18283.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47901]
gi|340770202|gb|EGR92717.1| 50S ribosomal protein L4 [Streptococcus mitis bv. 2 str. F0392]
gi|342829427|gb|EGU63781.1| 50S ribosomal protein L4 [Streptococcus mitis bv. 2 str. SK95]
gi|353752627|gb|EHD33252.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA11184]
gi|353778721|gb|EHD59187.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44500]
gi|353794883|gb|EHD75235.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44194]
gi|353798007|gb|EHD78337.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44378]
gi|353800921|gb|EHD81229.1| 50S ribosomal protein L4 [Streptococcus pneumoniae NP170]
gi|353831930|gb|EHE12053.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17971]
gi|353839314|gb|EHE19388.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41277]
gi|353845705|gb|EHE25745.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41565]
gi|353852470|gb|EHE32458.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47283]
gi|353874595|gb|EHE54450.1| 50S ribosomal protein L4 [Streptococcus pneumoniae
Netherlands15B-37]
gi|353889019|gb|EHE68791.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA07228]
gi|353893576|gb|EHE73321.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19690]
gi|353903338|gb|EHE78862.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA11663]
gi|357065834|gb|EHI76009.1| 50S ribosomal protein L4 [Streptococcus sp. oral taxon 058 str.
F0407]
gi|379540752|gb|EHZ05923.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA04175]
gi|379548404|gb|EHZ13536.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA06083]
gi|379553224|gb|EHZ18308.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13430]
gi|379555143|gb|EHZ20212.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13224]
gi|379568623|gb|EHZ33602.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17457]
gi|379573932|gb|EHZ38878.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19101]
gi|379576244|gb|EHZ41172.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA40028]
gi|379578984|gb|EHZ43892.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA40183]
gi|379596081|gb|EHZ60886.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47210]
gi|379596476|gb|EHZ61280.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47179]
gi|379602772|gb|EHZ67542.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47522]
gi|379603693|gb|EHZ68461.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47597]
gi|379631902|gb|EHZ96478.1| 50S ribosomal protein L4 [Streptococcus pneumoniae EU-NP05]
gi|379634736|gb|EHZ99300.1| 50S ribosomal protein L4 [Streptococcus pneumoniae NP141]
gi|381310918|gb|EIC51743.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SV36]
gi|381318844|gb|EIC59561.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SV35]
gi|381319845|gb|EIC60527.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 459-5]
gi|383184055|gb|EIC76583.1| 50S ribosomal protein L4 [Streptococcus oralis SK100]
gi|383187298|gb|EIC79751.1| 50S ribosomal protein L4 [Streptococcus oralis SK10]
gi|383352932|gb|EID30562.1| 50S ribosomal protein L4 [Streptococcus mitis SK579]
gi|395582095|gb|EJG42558.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070108]
gi|395582827|gb|EJG43277.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070109]
gi|395883609|gb|EJG94651.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA04672]
gi|395890149|gb|EJH01155.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA54354]
gi|395904814|gb|EJH15726.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA60080]
gi|395906596|gb|EJH17494.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA62331]
gi|395912826|gb|EJH23683.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA62681]
gi|404472830|gb|EKA17233.1| 50S ribosomal protein L4 [Streptococcus sp. GMD1S]
gi|429317205|emb|CCP36958.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPN034156]
gi|429318746|emb|CCP31949.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPN034183]
gi|429320559|emb|CCP33922.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPN994039]
gi|429322379|emb|CCP29963.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPN994038]
Length = 207
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGQVVLNDAVFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRSPQ 82
>gi|256827415|ref|YP_003151374.1| 50S ribosomal protein L4P [Cryptobacterium curtum DSM 15641]
gi|256583558|gb|ACU94692.1| LSU ribosomal protein L4P [Cryptobacterium curtum DSM 15641]
Length = 207
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 43/64 (67%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L VF + ++H+VVR Q A +QGTH T T +V G GKKPWRQKGTGRAR G++
Sbjct: 19 LNAGVFGIEPNVHVMHQVVRAQRASWRQGTHDTLTRGQVRGGGKKPWRQKGTGRARQGSI 78
Query: 176 RGPQ 179
R PQ
Sbjct: 79 RSPQ 82
>gi|169335630|ref|ZP_02862823.1| hypothetical protein ANASTE_02050 [Anaerofustis stercorihominis DSM
17244]
gi|169258368|gb|EDS72334.1| 50S ribosomal protein L4 [Anaerofustis stercorihominis DSM 17244]
Length = 205
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 43/63 (68%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L D+F + ++H+ V+ LA ++QGT S KT +EV G GKKPWRQKGTGRAR G+
Sbjct: 18 LNNDIFKIEPNMPVVHQYVKAYLANQRQGTQSAKTRAEVRGGGKKPWRQKGTGRARVGSS 77
Query: 176 RGP 178
R P
Sbjct: 78 RNP 80
>gi|148270423|ref|YP_001244883.1| 50S ribosomal protein L4 [Thermotoga petrophila RKU-1]
gi|170289182|ref|YP_001739420.1| 50S ribosomal protein L4 [Thermotoga sp. RQ2]
gi|281412730|ref|YP_003346809.1| ribosomal protein L4/L1e [Thermotoga naphthophila RKU-10]
gi|166199921|sp|A5IM84.1|RL4_THEP1 RecName: Full=50S ribosomal protein L4
gi|226731438|sp|B1LBN9.1|RL4_THESQ RecName: Full=50S ribosomal protein L4
gi|147735967|gb|ABQ47307.1| LSU ribosomal protein L4P [Thermotoga petrophila RKU-1]
gi|170176685|gb|ACB09737.1| ribosomal protein L4/L1e [Thermotoga sp. RQ2]
gi|281373833|gb|ADA67395.1| ribosomal protein L4/L1e [Thermotoga naphthophila RKU-10]
Length = 235
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E G + ++ VF++ D++ R V QL+ R+ GT STKT EVSG G+K
Sbjct: 4 VDLLNVKGEKVGTLEISDFVFNIDPNYDVMWRYVDMQLSNRRAGTASTKTRGEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PW QK TGRARHG++R P W + + KP
Sbjct: 64 PWPQKHTGRARHGSIRSPI-WRHGGIAHGPKP 94
>gi|421205633|ref|ZP_15662700.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2090008]
gi|421228894|ref|ZP_15685572.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2061376]
gi|421291022|ref|ZP_15741766.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA56348]
gi|421310919|ref|ZP_15761532.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA58981]
gi|395578054|gb|EJG38582.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2090008]
gi|395598561|gb|EJG58762.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2061376]
gi|395896822|gb|EJH07787.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA56348]
gi|395913879|gb|EJH24728.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA58981]
Length = 207
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGQVVLNDAVFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQ 179
RAR G++R PQ
Sbjct: 72 RARQGSIRSPQ 82
>gi|390363081|ref|XP_792959.3| PREDICTED: 39S ribosomal protein L4, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 270
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%)
Query: 80 LLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLA 139
++ + +L PD T+ Q + + + + G + L VF R DI+HR V WQ
Sbjct: 1 MITSRDLLHPDPTVEPIQAWLETINSLEDNKLGLLDLHPHVFATFPRLDILHRNVLWQRN 60
Query: 140 KRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGP 178
++ K+ +EV G GKKPWRQKGTGRARHG+ R P
Sbjct: 61 YKRISMAKAKSRAEVRGGGKKPWRQKGTGRARHGSTRSP 99
>gi|406671684|ref|ZP_11078923.1| 50S ribosomal protein L4 [Facklamia hominis CCUG 36813]
gi|405580934|gb|EKB54993.1| 50S ribosomal protein L4 [Facklamia hominis CCUG 36813]
Length = 207
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P F +D G + L +F V + +I V Q A +QGTH+ K S VSG
Sbjct: 1 MPKVTLFKQDGTQAGEVALNEAIFGVEPNEAVIFEAVVMQRASLRQGTHAVKNRSAVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQ 179
G+KPWRQKGTGRAR G++R PQ
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQ 82
>gi|39997948|ref|NP_953899.1| 50S ribosomal protein L4 [Geobacter sulfurreducens PCA]
gi|409913301|ref|YP_006891766.1| 50S ribosomal protein L4 [Geobacter sulfurreducens KN400]
gi|46577153|sp|P61063.1|RL4_GEOSL RecName: Full=50S ribosomal protein L4
gi|39984893|gb|AAR36249.1| ribosomal protein L4 [Geobacter sulfurreducens PCA]
gi|298506887|gb|ADI85610.1| ribosomal protein L4 [Geobacter sulfurreducens KN400]
Length = 207
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G M L +VF+ +++ +IH ++ QLA R+ GT S K + VSG GKKP+RQKGTG+AR
Sbjct: 15 GVMDLNDNVFNGEVKEYLIHEAIKVQLANRRAGTVSVKNRAIVSGGGKKPYRQKGTGQAR 74
Query: 172 HGTLRGPQ 179
G +R P
Sbjct: 75 QGCIRAPH 82
>gi|225016284|ref|ZP_03705476.1| hypothetical protein CLOSTMETH_00187 [Clostridium methylpentosum
DSM 5476]
gi|224950959|gb|EEG32168.1| hypothetical protein CLOSTMETH_00187 [Clostridium methylpentosum
DSM 5476]
Length = 207
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ + L+ +F + K ++H V LA ++QGT ST T +EV G GKK
Sbjct: 4 VAVMNMAGKEVSKIDLSDAIFGIEPNKAVLHMAVVNYLANQRQGTQSTLTRTEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQGWYYNARSKAQKP 192
PWRQKGTG AR G+ R PQ W + + KP
Sbjct: 64 PWRQKGTGHARQGSTRSPQ-WTHGGVALGPKP 94
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.135 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,563,034,247
Number of Sequences: 23463169
Number of extensions: 147050169
Number of successful extensions: 285835
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3251
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 282502
Number of HSP's gapped (non-prelim): 3310
length of query: 221
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 84
effective length of database: 9,144,741,214
effective search space: 768158261976
effective search space used: 768158261976
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 74 (33.1 bits)