Query 027585
Match_columns 221
No_of_seqs 342 out of 1715
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 20:37:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027585.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027585hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fi2_A Oxalate oxidase, germin 100.0 3.4E-49 1.2E-53 329.0 20.3 192 28-220 1-198 (201)
2 3kgl_A Cruciferin; 11S SEED gl 100.0 1E-29 3.6E-34 234.6 15.0 142 73-218 298-443 (466)
3 3ksc_A LEGA class, prolegumin; 100.0 1.4E-28 4.7E-33 228.7 17.5 153 62-218 321-478 (496)
4 3qac_A 11S globulin SEED stora 100.0 8.2E-29 2.8E-33 228.6 14.5 145 70-218 295-443 (465)
5 2e9q_A 11S globulin subunit be 100.0 1.6E-28 5.4E-33 227.0 14.8 153 63-219 286-443 (459)
6 3fz3_A Prunin; TREE NUT allerg 100.0 3.3E-28 1.1E-32 226.5 13.6 153 62-218 357-514 (531)
7 3c3v_A Arachin ARAH3 isoform; 99.9 4.5E-27 1.5E-31 219.3 17.4 146 70-219 344-493 (510)
8 1fxz_A Glycinin G1; proglycini 99.9 6.6E-27 2.3E-31 217.1 18.0 146 70-219 310-459 (476)
9 2cav_A Protein (canavalin); vi 99.9 3.4E-27 1.2E-31 217.6 15.2 155 59-218 243-412 (445)
10 1uij_A Beta subunit of beta co 99.9 5.1E-27 1.7E-31 214.9 15.7 156 58-218 210-383 (416)
11 2d5f_A Glycinin A3B4 subunit; 99.9 4E-27 1.4E-31 219.3 14.2 152 63-219 331-485 (493)
12 2ea7_A 7S globulin-1; beta bar 99.9 1.2E-26 4.1E-31 213.4 15.5 156 58-218 227-399 (434)
13 1dgw_A Canavalin; duplicated s 99.9 1.2E-25 4.1E-30 183.7 14.2 150 61-217 2-166 (178)
14 3s7i_A Allergen ARA H 1, clone 99.9 7.7E-26 2.6E-30 206.9 13.8 153 61-218 226-408 (418)
15 2vqa_A SLL1358 protein, MNCA; 99.9 9.5E-24 3.2E-28 188.4 16.9 159 55-219 194-352 (361)
16 2phl_A Phaseolin; plant SEED s 99.9 6.8E-24 2.3E-28 192.9 14.8 141 68-219 215-372 (397)
17 2cav_A Protein (canavalin); vi 99.9 9.4E-23 3.2E-27 188.0 15.1 153 60-217 46-211 (445)
18 1uij_A Beta subunit of beta co 99.9 1E-22 3.6E-27 186.3 13.3 152 60-216 8-173 (416)
19 2e9q_A 11S globulin subunit be 99.9 8.2E-23 2.8E-27 188.9 12.6 140 75-219 42-236 (459)
20 2ea7_A 7S globulin-1; beta bar 99.9 2.4E-22 8.2E-27 184.8 14.8 152 60-216 20-185 (434)
21 2phl_A Phaseolin; plant SEED s 99.9 2.6E-22 8.9E-27 182.5 13.2 152 60-216 11-181 (397)
22 1fxz_A Glycinin G1; proglycini 99.9 3.2E-22 1.1E-26 185.7 12.7 140 75-219 27-228 (476)
23 3qac_A 11S globulin SEED stora 99.9 1.1E-21 3.9E-26 181.0 13.0 139 75-218 29-237 (465)
24 3s7i_A Allergen ARA H 1, clone 99.9 1.9E-21 6.4E-26 177.9 13.0 135 75-216 19-168 (418)
25 3ksc_A LEGA class, prolegumin; 99.9 2.8E-21 9.7E-26 179.6 12.8 137 75-216 25-214 (496)
26 2vqa_A SLL1358 protein, MNCA; 99.8 1.9E-20 6.4E-25 167.0 16.3 149 62-217 20-171 (361)
27 2d5f_A Glycinin A3B4 subunit; 99.8 1.4E-20 4.7E-25 175.3 12.9 140 75-219 24-231 (493)
28 3kgl_A Cruciferin; 11S SEED gl 99.8 1.3E-20 4.6E-25 173.9 12.0 138 75-217 22-244 (466)
29 1j58_A YVRK protein; cupin, de 99.8 1.9E-19 6.4E-24 162.1 16.8 153 59-218 222-374 (385)
30 3c3v_A Arachin ARAH3 isoform; 99.8 4.6E-20 1.6E-24 172.1 12.7 138 75-217 27-268 (510)
31 3fz3_A Prunin; TREE NUT allerg 99.8 1.4E-19 4.9E-24 168.5 12.2 142 71-217 22-296 (531)
32 1j58_A YVRK protein; cupin, de 99.8 5.3E-19 1.8E-23 159.1 11.7 147 62-217 47-196 (385)
33 1dgw_X Canavalin; duplicated s 99.6 1.9E-16 6.5E-21 113.1 5.6 73 65-138 4-77 (79)
34 3h8u_A Uncharacterized conserv 99.6 1.5E-15 5.2E-20 115.3 10.8 83 96-183 38-121 (125)
35 3l2h_A Putative sugar phosphat 99.6 1.1E-14 3.7E-19 115.8 11.8 86 96-186 45-132 (162)
36 1lr5_A Auxin binding protein 1 99.6 2.4E-14 8.1E-19 114.1 12.7 114 96-214 40-158 (163)
37 2fqp_A Hypothetical protein BP 99.6 7.8E-15 2.7E-19 107.3 8.7 75 96-175 17-93 (97)
38 1v70_A Probable antibiotics sy 99.6 2.1E-14 7.3E-19 104.2 10.2 78 95-177 26-103 (105)
39 3ibm_A Cupin 2, conserved barr 99.6 1.2E-13 4E-18 111.3 15.1 117 55-178 11-132 (167)
40 3es1_A Cupin 2, conserved barr 99.5 2.3E-14 8E-19 116.4 10.1 80 95-181 77-157 (172)
41 3i7d_A Sugar phosphate isomera 99.5 7.1E-14 2.4E-18 112.0 12.6 86 96-186 42-130 (163)
42 2oa2_A BH2720 protein; 1017534 99.5 9.5E-14 3.3E-18 109.1 12.8 84 96-179 42-126 (148)
43 2xlg_A SLL1785 protein, CUCA; 99.5 2.1E-14 7.2E-19 122.3 9.0 82 94-175 40-137 (239)
44 3ht1_A REMF protein; cupin fol 99.5 9.2E-14 3.1E-18 107.4 10.8 82 96-183 38-121 (145)
45 2gu9_A Tetracenomycin polyketi 99.5 1.2E-13 4.1E-18 101.9 10.9 79 95-178 19-99 (113)
46 2bnm_A Epoxidase; oxidoreducta 99.5 2.8E-13 9.5E-18 110.6 12.2 81 93-175 113-197 (198)
47 4e2g_A Cupin 2 conserved barre 99.5 7.6E-14 2.6E-18 105.8 8.1 78 96-180 40-117 (126)
48 1x82_A Glucose-6-phosphate iso 99.5 5.1E-13 1.7E-17 109.7 13.5 83 96-178 66-156 (190)
49 3fjs_A Uncharacterized protein 99.5 1.2E-13 4E-18 104.2 8.8 73 96-174 35-107 (114)
50 3kgz_A Cupin 2 conserved barre 99.5 1.8E-13 6.2E-18 109.3 10.0 79 95-179 42-120 (156)
51 1o4t_A Putative oxalate decarb 99.5 2.7E-13 9.3E-18 104.7 9.9 77 94-175 54-130 (133)
52 2b8m_A Hypothetical protein MJ 99.5 3.8E-13 1.3E-17 100.9 10.3 75 96-176 26-101 (117)
53 3lag_A Uncharacterized protein 99.5 3.4E-14 1.2E-18 105.0 4.2 78 96-175 16-93 (98)
54 3jzv_A Uncharacterized protein 99.5 2.9E-13 9.8E-18 109.2 9.9 78 95-178 51-128 (166)
55 2pfw_A Cupin 2, conserved barr 99.4 3.6E-13 1.2E-17 100.5 9.1 77 96-180 33-109 (116)
56 2f4p_A Hypothetical protein TM 99.4 9.6E-13 3.3E-17 103.5 11.3 97 95-204 46-143 (147)
57 1vj2_A Novel manganese-contain 99.4 3.1E-13 1.1E-17 103.2 7.8 78 94-177 45-122 (126)
58 4i4a_A Similar to unknown prot 99.4 1.5E-12 5.2E-17 98.8 11.3 76 95-176 32-107 (128)
59 2o8q_A Hypothetical protein; c 99.4 8.3E-13 2.8E-17 101.3 9.6 80 97-182 43-123 (134)
60 2vpv_A Protein MIF2, MIF2P; nu 99.4 8.6E-13 3E-17 106.5 9.6 74 97-175 88-162 (166)
61 1y9q_A Transcriptional regulat 99.4 9.7E-13 3.3E-17 107.1 9.9 77 94-177 101-179 (192)
62 1yhf_A Hypothetical protein SP 99.4 1.8E-12 6.3E-17 96.5 10.4 74 96-177 39-112 (115)
63 3cew_A Uncharacterized cupin p 99.4 1.4E-12 4.8E-17 99.0 9.5 81 94-179 23-104 (125)
64 3h7j_A Bacilysin biosynthesis 99.4 1.2E-12 3.9E-17 111.1 9.0 80 97-182 145-225 (243)
65 1rc6_A Hypothetical protein YL 99.4 1.8E-12 6E-17 111.0 9.5 78 94-176 176-254 (261)
66 2ozj_A Cupin 2, conserved barr 99.3 7.7E-12 2.6E-16 93.3 10.9 72 97-176 38-109 (114)
67 2ozi_A Hypothetical protein RP 99.3 9.6E-13 3.3E-17 97.3 5.7 78 96-175 16-93 (98)
68 2q30_A Uncharacterized protein 99.3 5.4E-12 1.8E-16 92.8 9.3 75 96-177 32-108 (110)
69 1sef_A Conserved hypothetical 99.3 1.5E-11 5E-16 106.1 12.7 76 95-176 180-257 (274)
70 3lwc_A Uncharacterized protein 99.3 5.8E-12 2E-16 96.1 8.7 74 96-177 39-112 (119)
71 1y3t_A Hypothetical protein YX 99.3 1.3E-11 4.6E-16 108.0 10.3 78 96-179 45-122 (337)
72 1sfn_A Conserved hypothetical 99.3 3.7E-11 1.3E-15 102.2 12.5 77 94-176 162-239 (246)
73 2i45_A Hypothetical protein; n 99.3 1.4E-11 4.7E-16 91.0 7.7 69 99-175 30-99 (107)
74 1sq4_A GLXB, glyoxylate-induce 99.3 1.5E-11 5E-16 106.7 9.0 76 95-176 66-143 (278)
75 2opk_A Hypothetical protein; p 99.3 4.4E-11 1.5E-15 89.9 10.5 74 96-176 30-109 (112)
76 1rc6_A Hypothetical protein YL 99.3 1.6E-11 5.5E-16 105.0 9.1 77 95-176 57-134 (261)
77 2pyt_A Ethanolamine utilizatio 99.2 1.3E-11 4.4E-16 96.0 7.5 73 96-178 56-128 (133)
78 3h7j_A Bacilysin biosynthesis 99.2 1.9E-11 6.6E-16 103.5 8.9 74 98-177 35-109 (243)
79 1sef_A Conserved hypothetical 99.2 2.7E-11 9.4E-16 104.4 8.7 76 95-175 60-136 (274)
80 1y3t_A Hypothetical protein YX 99.2 1.5E-10 5E-15 101.4 13.3 75 99-179 219-294 (337)
81 4e2q_A Ureidoglycine aminohydr 99.2 6.9E-11 2.4E-15 102.0 10.6 103 56-175 38-141 (266)
82 1juh_A Quercetin 2,3-dioxygena 99.2 1E-10 3.6E-15 104.3 12.2 82 96-179 47-131 (350)
83 4h7l_A Uncharacterized protein 99.2 9.8E-11 3.4E-15 93.5 10.1 71 97-178 47-119 (157)
84 3d82_A Cupin 2, conserved barr 99.2 1.2E-10 4.1E-15 84.3 9.6 60 108-174 40-99 (102)
85 3rns_A Cupin 2 conserved barre 99.2 6.5E-11 2.2E-15 99.4 9.1 73 96-175 152-224 (227)
86 2d40_A Z3393, putative gentisa 99.2 3.1E-11 1.1E-15 108.0 7.2 75 96-176 99-174 (354)
87 1sq4_A GLXB, glyoxylate-induce 99.2 1.9E-10 6.4E-15 99.7 10.9 83 90-177 184-266 (278)
88 2d40_A Z3393, putative gentisa 99.1 2.5E-10 8.7E-15 102.1 11.4 90 77-176 249-339 (354)
89 3rns_A Cupin 2 conserved barre 99.1 2.1E-10 7.2E-15 96.2 10.2 74 96-177 36-109 (227)
90 4axo_A EUTQ, ethanolamine util 99.1 1.3E-10 4.5E-15 92.4 8.0 74 96-179 65-138 (151)
91 4e2q_A Ureidoglycine aminohydr 99.1 4.3E-10 1.5E-14 97.0 11.9 77 94-176 183-260 (266)
92 4b29_A Dimethylsulfoniopropion 99.1 2.3E-10 7.7E-15 95.7 8.8 76 95-177 130-206 (217)
93 3bu7_A Gentisate 1,2-dioxygena 99.1 1.4E-09 4.8E-14 98.7 13.3 92 78-176 276-368 (394)
94 3bu7_A Gentisate 1,2-dioxygena 99.0 8.1E-10 2.8E-14 100.2 10.4 77 94-176 120-198 (394)
95 1vr3_A Acireductone dioxygenas 99.0 2.8E-09 9.6E-14 87.7 12.5 84 98-183 75-168 (191)
96 3nw4_A Gentisate 1,2-dioxygena 99.0 3.5E-10 1.2E-14 101.7 7.6 77 95-177 101-178 (368)
97 1o5u_A Novel thermotoga mariti 99.0 6E-10 2E-14 82.6 6.4 62 101-170 35-97 (101)
98 1sfn_A Conserved hypothetical 99.0 1.8E-09 6.3E-14 91.6 9.3 71 96-176 49-119 (246)
99 3bcw_A Uncharacterized protein 98.9 1.5E-09 5.2E-14 83.2 6.3 66 96-168 48-114 (123)
100 2q1z_B Anti-sigma factor CHRR, 98.9 7E-09 2.4E-13 85.4 8.8 70 97-176 125-194 (195)
101 3ebr_A Uncharacterized RMLC-li 98.8 8.5E-09 2.9E-13 82.5 7.7 75 96-178 41-117 (159)
102 1juh_A Quercetin 2,3-dioxygena 98.8 2.4E-08 8.2E-13 89.0 11.4 75 96-177 248-326 (350)
103 2o1q_A Putative acetyl/propion 98.8 3.1E-09 1.1E-13 83.5 4.1 77 97-179 44-121 (145)
104 1zrr_A E-2/E-2' protein; nicke 98.8 4.1E-09 1.4E-13 85.9 4.9 71 110-183 93-163 (179)
105 2y0o_A Probable D-lyxose ketol 98.8 1.9E-08 6.4E-13 81.7 8.2 80 97-178 53-154 (175)
106 1dgw_Y Canavalin; duplicated s 98.7 8.5E-08 2.9E-12 70.1 10.1 73 141-218 6-82 (93)
107 1yfu_A 3-hydroxyanthranilate-3 98.7 8.3E-08 2.9E-12 77.4 10.8 61 103-165 41-101 (174)
108 3cjx_A Protein of unknown func 98.7 1.9E-08 6.5E-13 80.9 6.9 75 96-177 42-118 (165)
109 3eqe_A Putative cystein deoxyg 98.7 2E-07 6.8E-12 75.4 12.5 86 96-181 68-157 (171)
110 2arc_A ARAC, arabinose operon 98.6 4.1E-07 1.4E-11 70.5 10.8 61 111-177 32-93 (164)
111 3d0j_A Uncharacterized protein 98.6 1.2E-07 4.3E-12 73.8 7.4 69 106-176 38-109 (140)
112 3nw4_A Gentisate 1,2-dioxygena 98.5 4E-07 1.4E-11 81.8 10.4 89 78-176 260-350 (368)
113 3st7_A Capsular polysaccharide 98.5 5E-07 1.7E-11 79.5 10.4 84 98-183 273-365 (369)
114 2gm6_A Cysteine dioxygenase ty 98.5 1.3E-06 4.4E-11 72.7 11.6 83 96-179 78-169 (208)
115 1zvf_A 3-hydroxyanthranilate 3 98.5 1.3E-06 4.6E-11 70.3 10.6 60 103-164 40-103 (176)
116 3o14_A Anti-ecfsigma factor, C 98.4 8.4E-07 2.9E-11 74.5 8.9 72 96-179 42-113 (223)
117 2qnk_A 3-hydroxyanthranilate 3 98.3 2.8E-06 9.5E-11 73.2 10.3 67 105-175 39-105 (286)
118 3eln_A Cysteine dioxygenase ty 98.3 1.2E-05 4E-10 66.5 13.7 86 97-182 70-164 (200)
119 3bal_A Acetylacetone-cleaving 98.3 7.4E-07 2.5E-11 70.8 5.5 93 76-178 30-122 (153)
120 3myx_A Uncharacterized protein 98.1 1.7E-05 5.8E-10 67.2 10.6 72 96-176 46-117 (238)
121 2pa7_A DTDP-6-deoxy-3,4-keto-h 98.0 5.9E-05 2E-09 58.9 11.3 97 77-177 16-114 (141)
122 3uss_A Putative uncharacterize 98.0 0.00017 5.7E-09 60.0 13.4 84 96-180 72-164 (211)
123 3es4_A Uncharacterized protein 97.8 6.8E-05 2.3E-09 56.7 7.6 62 97-164 42-103 (116)
124 3ejk_A DTDP sugar isomerase; Y 97.7 0.00029 1E-08 56.8 10.6 74 103-176 59-141 (174)
125 1yud_A Hypothetical protein SO 97.7 0.00066 2.3E-08 54.5 12.2 131 75-215 26-164 (170)
126 3gbg_A TCP pilus virulence reg 97.5 0.00039 1.3E-08 58.5 9.2 75 96-174 6-84 (276)
127 3myx_A Uncharacterized protein 97.5 0.00043 1.5E-08 58.5 9.2 63 96-164 166-228 (238)
128 3o14_A Anti-ecfsigma factor, C 97.2 0.00065 2.2E-08 56.8 6.7 64 98-173 147-210 (223)
129 2vec_A YHAK, pirin-like protei 97.2 0.0021 7.3E-08 54.8 9.7 73 99-175 66-141 (256)
130 3kmh_A D-lyxose isomerase; cup 97.1 0.0021 7.2E-08 54.1 8.6 79 97-175 106-207 (246)
131 3bb6_A Uncharacterized protein 97.0 0.0042 1.4E-07 47.5 8.7 71 105-176 22-100 (127)
132 1vrb_A Putative asparaginyl hy 97.0 0.0056 1.9E-07 54.1 10.9 73 102-175 145-252 (342)
133 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 96.9 0.0062 2.1E-07 49.4 10.0 69 105-174 56-134 (185)
134 2ixk_A DTDP-4-dehydrorhamnose 96.9 0.0069 2.3E-07 49.1 10.1 70 105-175 57-136 (184)
135 1tq5_A Protein YHHW; bicupin, 96.7 0.0079 2.7E-07 50.8 9.4 73 99-175 43-118 (242)
136 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 96.7 0.0077 2.6E-07 49.4 8.8 69 105-175 68-142 (197)
137 1wlt_A 176AA long hypothetical 96.6 0.015 5.2E-07 47.6 10.2 69 104-173 72-151 (196)
138 4gjz_A Lysine-specific demethy 96.6 0.0058 2E-07 49.7 7.3 66 100-166 126-226 (235)
139 3ryk_A DTDP-4-dehydrorhamnose 96.4 0.015 5.1E-07 48.0 8.7 67 105-172 78-155 (205)
140 1dzr_A DTDP-4-dehydrorhamnose 96.4 0.027 9.3E-07 45.5 10.2 68 105-173 55-133 (183)
141 2c0z_A NOVW; isomerase, epimer 96.2 0.029 1E-06 46.6 9.7 68 105-173 63-141 (216)
142 2qdr_A Uncharacterized protein 96.2 0.053 1.8E-06 46.2 11.3 90 75-180 75-165 (303)
143 3d8c_A Hypoxia-inducible facto 96.2 0.018 6.3E-07 50.8 8.8 73 102-175 187-296 (349)
144 1oi6_A PCZA361.16; epimerase, 96.1 0.049 1.7E-06 44.8 10.3 68 105-173 55-133 (205)
145 2qnk_A 3-hydroxyanthranilate 3 96.0 0.02 6.7E-07 49.3 7.7 61 104-174 214-275 (286)
146 1upi_A DTDP-4-dehydrorhamnose 95.9 0.066 2.3E-06 44.7 10.6 68 105-173 74-152 (225)
147 2xdv_A MYC-induced nuclear ant 95.9 0.046 1.6E-06 49.9 10.4 65 100-165 141-223 (442)
148 4diq_A Lysine-specific demethy 95.6 0.13 4.3E-06 47.7 11.9 75 100-175 166-262 (489)
149 4hn1_A Putative 3-epimerase in 95.5 0.069 2.4E-06 43.8 9.0 66 105-170 52-128 (201)
150 1eyb_A Homogentisate 1,2-dioxy 95.5 0.05 1.7E-06 49.9 8.7 56 112-174 172-227 (471)
151 3al5_A HTYW5, JMJC domain-cont 95.4 0.04 1.4E-06 48.4 7.7 71 101-174 170-271 (338)
152 2qjv_A Uncharacterized IOLB-li 95.3 0.13 4.5E-06 44.0 10.3 81 96-178 152-248 (270)
153 3rcq_A Aspartyl/asparaginyl be 95.2 0.043 1.5E-06 44.9 6.7 84 87-176 91-180 (197)
154 1e5r_A Proline oxidase; oxidor 94.9 0.019 6.5E-07 49.8 3.8 68 97-168 91-167 (290)
155 2p17_A Pirin-like protein; GK1 94.6 0.27 9.2E-06 42.0 10.3 69 103-175 45-115 (277)
156 3k2o_A Bifunctional arginine d 93.9 0.21 7.2E-06 43.9 8.4 76 102-177 176-292 (336)
157 2oyz_A UPF0345 protein VPA0057 93.7 0.33 1.1E-05 35.0 7.7 64 103-174 29-92 (94)
158 2yu1_A JMJC domain-containing 93.4 0.22 7.6E-06 45.6 8.0 75 105-179 204-304 (451)
159 1xru_A 4-deoxy-L-threo-5-hexos 93.4 0.42 1.4E-05 41.1 9.2 82 96-179 179-266 (282)
160 2rg4_A Uncharacterized protein 93.0 0.23 7.8E-06 40.8 6.8 75 98-175 104-203 (216)
161 3kv5_D JMJC domain-containing 92.9 0.2 6.7E-06 46.4 6.9 62 105-166 274-361 (488)
162 1pmi_A PMI, phosphomannose iso 92.9 0.38 1.3E-05 43.8 8.7 76 96-175 356-437 (440)
163 1ywk_A 4-deoxy-L-threo-5-hexos 92.8 0.96 3.3E-05 38.9 10.6 82 96-179 179-266 (289)
164 3loi_A Putative uncharacterize 92.8 3 0.0001 33.2 13.5 107 97-215 53-167 (172)
165 1j1l_A Pirin; beta sandwich, c 92.8 0.66 2.3E-05 39.9 9.7 74 98-175 41-117 (290)
166 1qwr_A Mannose-6-phosphate iso 92.7 0.36 1.2E-05 42.1 7.9 56 97-160 251-306 (319)
167 3m3i_A Putative uncharacterize 92.7 3.1 0.00011 34.5 13.1 132 75-215 33-209 (225)
168 3hqx_A UPF0345 protein aciad03 92.3 0.62 2.1E-05 34.5 7.6 67 103-175 43-109 (111)
169 3kv4_A PHD finger protein 8; e 92.2 0.45 1.5E-05 43.5 8.2 75 105-179 239-339 (447)
170 2wfp_A Mannose-6-phosphate iso 91.9 0.21 7.1E-06 44.9 5.6 56 96-159 323-378 (394)
171 3dl3_A Tellurite resistance pr 91.9 1.1 3.6E-05 33.7 8.6 51 116-166 36-89 (119)
172 3kv9_A JMJC domain-containing 91.7 0.32 1.1E-05 43.8 6.5 65 102-166 179-270 (397)
173 3k3o_A PHF8, PHD finger protei 91.6 0.33 1.1E-05 43.3 6.5 63 105-167 155-243 (371)
174 1tq5_A Protein YHHW; bicupin, 91.2 1.1 3.7E-05 37.5 9.0 73 95-178 158-230 (242)
175 1zx5_A Mannosephosphate isomer 90.7 0.9 3.1E-05 39.2 8.2 56 97-162 230-286 (300)
176 1znp_A Hypothetical protein AT 90.6 4.9 0.00017 31.3 11.6 90 75-165 19-115 (154)
177 3pua_A GRC5, PHD finger protei 89.9 0.69 2.4E-05 41.5 7.0 63 105-167 182-270 (392)
178 1qwr_A Mannose-6-phosphate iso 89.7 0.43 1.5E-05 41.5 5.4 46 117-162 116-179 (319)
179 2qjv_A Uncharacterized IOLB-li 88.5 3.8 0.00013 34.8 10.3 84 81-175 16-109 (270)
180 3eo6_A Protein of unknown func 88.1 1.4 4.7E-05 32.4 6.3 55 103-163 42-96 (106)
181 2vec_A YHAK, pirin-like protei 87.7 3 0.0001 35.1 9.1 72 95-173 180-251 (256)
182 2ypd_A Probable JMJC domain-co 87.5 0.53 1.8E-05 42.2 4.4 40 140-179 292-331 (392)
183 1j1l_A Pirin; beta sandwich, c 87.5 2.3 8E-05 36.4 8.4 79 94-177 166-244 (290)
184 2p17_A Pirin-like protein; GK1 86.4 2.3 7.8E-05 36.2 7.8 74 94-176 164-242 (277)
185 3pur_A Lysine-specific demethy 85.6 1.7 5.7E-05 40.5 6.8 62 105-166 304-391 (528)
186 3g7d_A PHPD; non heme Fe(II) d 85.1 12 0.00039 33.1 11.5 49 119-170 355-403 (443)
187 3mdp_A Cyclic nucleotide-bindi 82.5 2.3 7.8E-05 30.5 5.3 52 99-151 29-84 (142)
188 2pqq_A Putative transcriptiona 81.9 3.2 0.00011 29.9 6.0 51 100-151 29-80 (149)
189 1ywk_A 4-deoxy-L-threo-5-hexos 81.9 5.9 0.0002 34.0 8.3 69 102-175 62-133 (289)
190 1zx5_A Mannosephosphate isomer 81.2 1.1 3.9E-05 38.5 3.7 45 118-162 117-179 (300)
191 3idb_B CAMP-dependent protein 79.6 5.7 0.00019 29.4 6.8 51 99-151 61-112 (161)
192 2oz6_A Virulence factor regula 78.1 7.4 0.00025 29.8 7.3 51 100-151 14-65 (207)
193 4ev0_A Transcription regulator 77.8 6.3 0.00022 30.5 6.9 117 100-219 23-187 (216)
194 3dn7_A Cyclic nucleotide bindi 77.7 6.8 0.00023 29.8 6.9 52 100-152 31-83 (194)
195 2bgc_A PRFA; bacterial infecti 77.3 12 0.0004 29.7 8.5 71 101-174 20-98 (238)
196 3fx3_A Cyclic nucleotide-bindi 77.0 7 0.00024 30.8 7.0 51 100-151 35-86 (237)
197 3e97_A Transcriptional regulat 76.9 7.4 0.00025 30.5 7.1 52 99-151 29-81 (231)
198 3ryp_A Catabolite gene activat 76.6 7.9 0.00027 29.7 7.1 52 100-152 20-72 (210)
199 3gyd_A CNMP-BD protein, cyclic 76.6 7.3 0.00025 29.9 6.9 52 99-151 62-114 (187)
200 1ft9_A Carbon monoxide oxidati 76.0 17 0.00058 28.3 9.0 70 99-174 23-93 (222)
201 3d0s_A Transcriptional regulat 76.0 8.4 0.00029 30.1 7.2 50 101-151 31-81 (227)
202 2z69_A DNR protein; beta barre 76.0 3.1 0.0001 30.3 4.3 52 99-151 35-87 (154)
203 2wfp_A Mannose-6-phosphate iso 75.6 2.2 7.7E-05 38.1 3.9 24 140-163 239-262 (394)
204 3iwz_A CAP-like, catabolite ac 75.6 7.8 0.00027 30.2 6.9 52 100-152 35-87 (230)
205 1zyb_A Transcription regulator 74.3 6.7 0.00023 31.1 6.2 118 99-219 43-210 (232)
206 3b02_A Transcriptional regulat 74.1 7.2 0.00025 29.9 6.2 35 118-152 17-52 (195)
207 3dv8_A Transcriptional regulat 74.0 7.3 0.00025 30.2 6.3 117 100-219 27-193 (220)
208 2fmy_A COOA, carbon monoxide o 73.8 25 0.00086 27.1 9.5 115 99-219 27-191 (220)
209 2ptm_A Hyperpolarization-activ 73.8 6.6 0.00023 30.3 5.9 49 99-151 94-142 (198)
210 4ava_A Lysine acetyltransferas 72.7 7.3 0.00025 32.6 6.4 51 100-151 37-87 (333)
211 3kcc_A Catabolite gene activat 72.6 11 0.00037 30.5 7.2 51 100-151 70-121 (260)
212 3la7_A Global nitrogen regulat 71.9 10 0.00035 30.2 6.8 52 99-151 43-95 (243)
213 2gau_A Transcriptional regulat 71.6 6.7 0.00023 30.8 5.6 118 99-219 33-204 (232)
214 1o5l_A Transcriptional regulat 71.5 8.5 0.00029 30.0 6.1 52 99-151 22-74 (213)
215 3bpz_A Potassium/sodium hyperp 69.4 8.2 0.00028 29.9 5.6 48 99-151 95-142 (202)
216 3e6c_C CPRK, cyclic nucleotide 69.3 13 0.00043 29.7 6.9 52 100-152 33-85 (250)
217 1pmi_A PMI, phosphomannose iso 68.5 4 0.00014 37.0 3.9 22 142-163 267-288 (440)
218 1xe7_A YML079WP, hypothetical 68.4 46 0.0016 26.9 12.8 110 98-218 80-200 (203)
219 3pna_A CAMP-dependent protein 67.8 11 0.00037 27.7 5.7 48 99-151 61-108 (154)
220 2qcs_B CAMP-dependent protein 66.4 16 0.00054 29.7 7.0 52 99-151 180-233 (291)
221 4f8a_A Potassium voltage-gated 66.0 12 0.0004 27.2 5.6 48 100-152 51-98 (160)
222 1xsq_A Ureidoglycolate hydrola 65.3 12 0.0004 29.5 5.6 63 112-174 71-139 (168)
223 3ocp_A PRKG1 protein; serine/t 64.6 14 0.00048 26.3 5.7 47 100-151 47-93 (139)
224 1xru_A 4-deoxy-L-threo-5-hexos 64.0 12 0.0004 32.1 5.7 54 116-175 77-133 (282)
225 2bdr_A Ureidoglycolate hydrola 61.9 17 0.00057 28.8 6.0 65 111-175 72-142 (175)
226 2d93_A RAP guanine nucleotide 61.4 9.7 0.00033 27.1 4.2 48 99-151 39-87 (134)
227 1yll_A PA5104, conserved hypot 61.3 11 0.00039 30.4 5.0 88 60-157 88-175 (200)
228 3tnp_B CAMP-dependent protein 59.9 24 0.00082 31.0 7.3 51 99-151 168-219 (416)
229 3ukn_A Novel protein similar t 59.8 13 0.00043 28.9 4.9 49 99-152 98-146 (212)
230 1o7f_A CAMP-dependent RAP1 gua 59.7 17 0.00058 31.9 6.3 53 99-152 65-120 (469)
231 2zcw_A TTHA1359, transcription 57.1 21 0.00073 27.2 5.8 70 102-174 8-84 (202)
232 3g7d_A PHPD; non heme Fe(II) d 55.1 36 0.0012 30.0 7.2 72 142-215 156-263 (443)
233 1vp6_A CNBD, cyclic-nucleotide 54.4 13 0.00044 26.3 3.9 45 100-151 35-79 (138)
234 3of1_A CAMP-dependent protein 54.2 13 0.00044 29.2 4.1 47 100-151 31-77 (246)
235 2qcs_B CAMP-dependent protein 54.0 20 0.00069 29.0 5.5 48 99-151 62-109 (291)
236 2xxz_A Lysine-specific demethy 52.7 23 0.00079 30.9 5.7 35 140-174 278-312 (332)
237 3shr_A CGMP-dependent protein 52.1 26 0.00087 28.6 5.8 52 99-151 180-233 (299)
238 3dkw_A DNR protein; CRP-FNR, H 50.9 6.2 0.00021 30.8 1.7 52 100-152 33-85 (227)
239 3of1_A CAMP-dependent protein 48.9 28 0.00096 27.1 5.4 49 99-151 148-196 (246)
240 3shr_A CGMP-dependent protein 48.4 24 0.00081 28.8 5.0 48 99-151 62-109 (299)
241 1s4c_A Protein HI0227; double- 45.3 37 0.0013 25.8 5.3 53 111-163 61-134 (155)
242 4ask_A Lysine-specific demethy 42.4 24 0.00082 32.6 4.4 80 86-169 228-341 (510)
243 3avr_A Lysine-specific demethy 42.3 38 0.0013 31.5 5.7 33 140-172 337-369 (531)
244 2qdr_A Uncharacterized protein 39.9 51 0.0017 28.0 5.6 66 96-179 216-289 (303)
245 1wgp_A Probable cyclic nucleot 36.9 8.8 0.0003 27.3 0.5 33 118-151 47-82 (137)
246 4din_B CAMP-dependent protein 35.2 56 0.0019 28.1 5.5 49 102-151 274-324 (381)
247 4din_B CAMP-dependent protein 32.9 30 0.001 29.8 3.4 48 99-151 153-200 (381)
248 4f7z_A RAP guanine nucleotide 31.2 89 0.0031 30.6 6.8 53 98-151 64-119 (999)
249 3tnp_B CAMP-dependent protein 30.8 65 0.0022 28.2 5.2 52 99-151 290-348 (416)
250 2dkz_A Hypothetical protein LO 30.3 37 0.0013 23.6 2.8 30 185-217 45-74 (84)
251 1tc3_C Protein (TC3 transposas 27.7 63 0.0022 18.0 3.3 25 195-219 21-45 (51)
252 3nnf_A CURA; non-HAEM Fe(II)/a 26.8 58 0.002 28.4 3.9 22 141-162 234-255 (344)
253 1o7f_A CAMP-dependent RAP1 gua 24.8 1.6E+02 0.0054 25.5 6.7 46 102-151 364-409 (469)
254 1wy3_A Villin; structural prot 23.7 41 0.0014 19.4 1.7 21 196-216 1-21 (35)
255 1pcq_O Groes protein; chaperon 21.5 2.2E+02 0.0075 20.0 6.3 30 123-155 40-69 (97)
256 1und_A Advillin, P92; actin bi 21.5 48 0.0016 19.4 1.7 21 196-216 3-23 (37)
257 2a1x_A Phytanoyl-COA dioxygena 21.4 1.1E+02 0.0037 25.2 4.7 30 139-168 214-244 (308)
258 2opw_A Phyhd1 protein; double- 20.5 75 0.0025 26.0 3.4 28 140-167 227-255 (291)
No 1
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=100.00 E-value=3.4e-49 Score=328.98 Aligned_cols=192 Identities=58% Similarity=0.979 Sum_probs=183.8
Q ss_pred cCCCCCcceeeccCCCC-cccCCcccCCCcccccCCeEEec-ccCCCCc-ccCCeeEEEeeccccCCCcccceEEEEEEE
Q 027585 28 ADPDPLQDFCVADLKAS-ASLNGFPCKLAAEVTSGDFFFDG-LSKEGNT-TIFGSAVTPANVLAFPGVNTLGISMNRVDF 104 (221)
Q Consensus 28 ~d~~~~~dfcva~~~~~-~~~~g~~ck~p~~~~~~df~~~~-l~~~~~~-~~~g~~v~~~~~~~fP~l~~~gis~~~v~l 104 (221)
+||||||||||||++++ +++||++|| |+.++++||+|++ +.+++++ +..|+.++.++..++|+++++++++.++++
T Consensus 1 ~~~~~~~d~c~~~~~~~~~~~~g~~c~-~~~~~~~df~~~~~~~~~~~~~~~~G~~v~~~~~~~~p~l~~~~~~~~~~~l 79 (201)
T 1fi2_A 1 TDPDPLQDFCVADLDGKAVSVNGHTCK-PMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDF 79 (201)
T ss_dssp CCCCCSSSCCCBCCCTTSCCCSSCCBC-CGGGCCSCTTCCCTTSSCCCCCSTTSEEEEEESTTTCGGGTTSSCEEEEEEE
T ss_pred CCCcccceeEEecCCCCcccccCcccc-cCcccccceEEeeeecCCCCccCCCCcEEEEEecccCCCcccCceEEEEEEE
Confidence 59999999999999988 999999999 9999999999998 9999887 889999999999999999999999999999
Q ss_pred cCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecC---CeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEEcCCCCe
Q 027585 105 APGGLNPPHSHPRASESGIVIKGKLLVGFFTTN---NVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFNSHLPG 181 (221)
Q Consensus 105 ~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~---~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg 181 (221)
.||+..++|||+++.|++||++|++++++.+.+ ++++++.|++||+++||+|.+|+++|.|++++++++++++++|+
T Consensus 80 ~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~p~ 159 (201)
T 1fi2_A 80 APGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPG 159 (201)
T ss_dssp CTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSCCC
T ss_pred CCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCCC
Confidence 999999999999888999999999999998665 67778999999999999999999999999999999999999999
Q ss_pred eeeccchhhcCCCCCCHHHHHhhcCCCHHHHHHHHhhhC
Q 027585 182 AVIVPTTLFASTPSVPNQVLTKTFQVDDDLISTIKSKFG 220 (221)
Q Consensus 182 ~~~~~~~lf~~~p~~~~~vla~~f~l~~~~v~~l~~~~~ 220 (221)
.+.++.++|+++|++++|+|+++|+++.+++++||++|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~vl~~af~~~~~~v~~l~~~~~ 198 (201)
T 1fi2_A 160 IVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKFA 198 (201)
T ss_dssp CEEHHHHHHHCSSCCCHHHHHHHHTSCHHHHHHHHHHST
T ss_pred eEehhhHHhcCCCCCCHHHHHHHHCcCHHHHHHHHHhhc
Confidence 999999999998889999999999999999999999885
No 2
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.96 E-value=1e-29 Score=234.63 Aligned_cols=142 Identities=15% Similarity=0.190 Sum_probs=133.8
Q ss_pred Cc-ccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCC-eEEEEEecCCcE
Q 027585 73 NT-TIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNN-VFYSKVLSAGEM 150 (221)
Q Consensus 73 ~~-~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~-~~~~~~L~~GDv 150 (221)
+. ++.||+++.+++.+||+|++++|++++++|.||++.+||||++|+|++||++|++++++.+++| +++..+|++||+
T Consensus 298 d~~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV 377 (466)
T 3kgl_A 298 DVYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQL 377 (466)
T ss_dssp EEEETTTEEEEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCE
T ss_pred CcccCCCceEEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcE
Confidence 44 7889999999999999999999999999999999999999999999999999999999999864 678999999999
Q ss_pred EEECCCCeEEEEecCCccEEEEEEEcCCCCeeeecc--chhhcCCCCCCHHHHHhhcCCCHHHHHHHHhh
Q 027585 151 FVIPRGLIHFQQNVGEGKALAFTAFNSHLPGAVIVP--TTLFASTPSVPNQVLTKTFQVDDDLISTIKSK 218 (221)
Q Consensus 151 ~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~~~~vla~~f~l~~~~v~~l~~~ 218 (221)
++||+|.+|++ |.|++++.+++++++++|+...++ .++|++ +|++||+++|+++.+++++|+++
T Consensus 378 ~v~P~G~~H~~-~ag~e~~~~l~~f~s~np~~~~LaG~~s~~~~---lP~eVla~aF~v~~~~v~~Lk~~ 443 (466)
T 3kgl_A 378 LSIPQGFSVVK-RATSEQFRWIEFKTNANAQINTLAGRTSVLRG---LPLEVISNGYQISLEEARRVKFN 443 (466)
T ss_dssp EEECTTCEEEE-EECSSEEEEEEEESSSSCCEEESSSTTCTGGG---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred EEECCCCeEEE-EcCCCCEEEEEEECCCCCccccccchhhhhhh---CCHHHHHHHhCcCHHHHHHHHhc
Confidence 99999999998 778999999999999999999998 577886 99999999999999999999974
No 3
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.96 E-value=1.4e-28 Score=228.66 Aligned_cols=153 Identities=14% Similarity=0.219 Sum_probs=136.8
Q ss_pred CeEEeccc-CCCCc-ccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecC-C
Q 027585 62 DFFFDGLS-KEGNT-TIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTN-N 138 (221)
Q Consensus 62 df~~~~l~-~~~~~-~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~-~ 138 (221)
.+.++... ...+. ++.||+++.+++.+||+|+++||++++++|.||++.+|||||+|+|++||++|++++++.+.+ +
T Consensus 321 ~l~~Ni~~p~~~di~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~ 400 (496)
T 3ksc_A 321 KLRLNIGPSSSPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGN 400 (496)
T ss_dssp CCEEECSTTSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSC
T ss_pred hhhccccccccCCcccCCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCc
Confidence 34565332 22344 788999999999999999999999999999999999999999999999999999999999986 4
Q ss_pred eEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEEcCCCCeeeecc--chhhcCCCCCCHHHHHhhcCCCHHHHHHHH
Q 027585 139 VFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFNSHLPGAVIVP--TTLFASTPSVPNQVLTKTFQVDDDLISTIK 216 (221)
Q Consensus 139 ~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~~~~vla~~f~l~~~~v~~l~ 216 (221)
+++..+|++||+++||+|.+|+..|. ++++.+++++++++|+...++ .++|+. +|++||+++|++|.+++++|+
T Consensus 401 ~~f~~~l~~GDV~v~P~G~~H~~~a~-~e~~~~l~f~~s~np~~~~LaG~~sv~~~---~p~eVLa~aF~v~~~~v~~Lk 476 (496)
T 3ksc_A 401 TVFDGELEAGRALTVPQNYAVAAKSL-SDRFSYVAFKTNDRAGIARLAGTSSVINN---LPLDVVAATFNLQRNEARQLK 476 (496)
T ss_dssp EEEEEEEETTCEEEECTTCEEEEEEC-SSEEEEEEEESSTTCCEEESSSTTCTTTT---SCHHHHHHHHTCCHHHHHHHH
T ss_pred EEEEEEecCCeEEEECCCCEEEEEeC-CCCEEEEEEECCCCCccccccchhhhhhh---CCHHHHHHHHCcCHHHHHHHH
Confidence 67888999999999999999998774 788999999999999999887 568875 999999999999999999998
Q ss_pred hh
Q 027585 217 SK 218 (221)
Q Consensus 217 ~~ 218 (221)
+.
T Consensus 477 ~~ 478 (496)
T 3ksc_A 477 SN 478 (496)
T ss_dssp HS
T ss_pred hc
Confidence 74
No 4
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.96 E-value=8.2e-29 Score=228.60 Aligned_cols=145 Identities=17% Similarity=0.210 Sum_probs=134.8
Q ss_pred CCCCc-ccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecC-CeEEEEEecC
Q 027585 70 KEGNT-TIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTN-NVFYSKVLSA 147 (221)
Q Consensus 70 ~~~~~-~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~-~~~~~~~L~~ 147 (221)
...+. ++.|++++.+++.+||+|+++|++++++++.||++.+|||||+|+|++||++|++++++.+++ ++++..+|++
T Consensus 295 ~~~dv~~~~gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~ 374 (465)
T 3qac_A 295 SKADVYTPEAGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSR 374 (465)
T ss_dssp TTCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCceEEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecC
Confidence 34455 888999999999999999999999999999999999999999999999999999999999986 4788999999
Q ss_pred CcEEEECCCCeEEEEecCCccEEEEEEEcCCCCeeeecc--chhhcCCCCCCHHHHHhhcCCCHHHHHHHHhh
Q 027585 148 GEMFVIPRGLIHFQQNVGEGKALAFTAFNSHLPGAVIVP--TTLFASTPSVPNQVLTKTFQVDDDLISTIKSK 218 (221)
Q Consensus 148 GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~~~~vla~~f~l~~~~v~~l~~~ 218 (221)
||+++||+|.+|+.. .|++++.+++++++++|+.+.++ .++|+. +|++||+++|++|.+++++|+++
T Consensus 375 GDVfvvP~g~~h~~~-ag~e~~~~l~f~~s~np~~~~LaG~~sv~~~---ip~eVla~aF~v~~e~v~~Lk~~ 443 (465)
T 3qac_A 375 GQLVVVPQNFAIVKQ-AFEDGFEWVSFKTSENAMFQSLAGRTSAIRS---LPIDVVSNIYQISREEAFGLKFN 443 (465)
T ss_dssp TCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSSSBHHHH---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred CeEEEECCCcEEEEE-cCCCCeEEEEEecCCCCcccccccchhhhhh---CCHHHHHHHhCCCHHHHHHHHhc
Confidence 999999999999986 57889999999999999999997 678886 99999999999999999999875
No 5
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.96 E-value=1.6e-28 Score=227.04 Aligned_cols=153 Identities=11% Similarity=0.167 Sum_probs=138.4
Q ss_pred eEEeccc-CCCCc-ccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCC-e
Q 027585 63 FFFDGLS-KEGNT-TIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNN-V 139 (221)
Q Consensus 63 f~~~~l~-~~~~~-~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~-~ 139 (221)
+.++... ..+++ ++.|++++.+++.+||+|++++++++++++.||++.+||||+++.|++||++|++++++++.+| +
T Consensus 286 l~~n~~~~~~~~~~~~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~ 365 (459)
T 2e9q_A 286 LKQNIGRSERADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQS 365 (459)
T ss_dssp CEEECSTTSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCE
T ss_pred eeecccccccCCcccCCCeeEEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCE
Confidence 4444332 44555 8899999999999999999999999999999999999999999999999999999999998764 6
Q ss_pred EEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEEcCCCCeeeecc--chhhcCCCCCCHHHHHhhcCCCHHHHHHHHh
Q 027585 140 FYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFNSHLPGAVIVP--TTLFASTPSVPNQVLTKTFQVDDDLISTIKS 217 (221)
Q Consensus 140 ~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~~~~vla~~f~l~~~~v~~l~~ 217 (221)
++..+|++||+++||+|.+|++.| |++++.+++++++++|+...++ .++|++ +|++||+++|+++.+++++|++
T Consensus 366 ~~~~~l~~GDv~v~P~G~~H~~~n-g~~~~~~l~~~~s~~~~~~~laG~~s~~~~---~p~~Vla~af~v~~~~v~~l~~ 441 (459)
T 2e9q_A 366 VFDGEVREGQVLMIPQNFVVIKRA-SDRGFEWIAFKTNDNAITNLLAGRVSQMRM---LPLGVLSNMYRISREEAQRLKY 441 (459)
T ss_dssp EEEEEEETTCEEEECTTCEEEEEE-EEEEEEEEEEESSSSCCEEESSSSSSHHHH---SCHHHHHHHHTCCHHHHHHHHH
T ss_pred EEeeEEeCCcEEEECCCCEEEEEe-CCCCeEEEEEecCCCCcceeecchhHHHHh---CCHHHHHHHHCcCHHHHHHHHh
Confidence 777889999999999999999999 7889999999999999999998 677886 9999999999999999999998
Q ss_pred hh
Q 027585 218 KF 219 (221)
Q Consensus 218 ~~ 219 (221)
..
T Consensus 442 ~~ 443 (459)
T 2e9q_A 442 GQ 443 (459)
T ss_dssp SC
T ss_pred cC
Confidence 63
No 6
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.95 E-value=3.3e-28 Score=226.46 Aligned_cols=153 Identities=18% Similarity=0.259 Sum_probs=135.5
Q ss_pred CeEEeccc-CCCCc-ccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCC-
Q 027585 62 DFFFDGLS-KEGNT-TIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNN- 138 (221)
Q Consensus 62 df~~~~l~-~~~~~-~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~- 138 (221)
.+.|+... ...++ ++.|++++.+++.+||+|+++++++++++|.||++.+||||++++|++||++|++++++++++|
T Consensus 357 rl~~Ni~~ps~~d~~n~~GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~ 436 (531)
T 3fz3_A 357 RLKENIGNPERADIFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGD 436 (531)
T ss_dssp CCEEECCCGGGCSEEETTTEEEEEESTTTCTHHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSC
T ss_pred eeeeccCCcccCCcccCCCeEEEEeccccCCccccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCCc
Confidence 34666432 33455 8889999999999999999999999999999999999999999999999999999999999864
Q ss_pred eEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEEcCCCCeeeecc--chhhcCCCCCCHHHHHhhcCCCHHHHHHHH
Q 027585 139 VFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFNSHLPGAVIVP--TTLFASTPSVPNQVLTKTFQVDDDLISTIK 216 (221)
Q Consensus 139 ~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~~~~vla~~f~l~~~~v~~l~ 216 (221)
++++.+|++||+++||+|.+|+.. .+++.+.++++.++++|+...++ .++|++ +|++||+++|++|.+++++|+
T Consensus 437 ~v~~~~L~~GDV~v~P~G~~H~~~-ag~e~l~flaF~ss~np~~~~LaG~~svf~~---lP~eVLa~aF~v~~e~v~kLk 512 (531)
T 3fz3_A 437 AILDQEVQQGQLFIVPQNHGVIQQ-AGNQGFEYFAFKTEENAFINTLAGRTSFLRA---LPDEVLANAYQISREQARQLK 512 (531)
T ss_dssp EEEEEEEETTCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSTTCHHHH---SCHHHHHHHHTCCHHHHHHHH
T ss_pred EEEEEEecCCeEEEECCCCeEEEe-cCCCCEEEEEEecCCCCcceeccchhHHHHh---CCHHHHHHHhCcCHHHHHHHH
Confidence 678999999999999999999765 46777888766677999999998 778886 999999999999999999999
Q ss_pred hh
Q 027585 217 SK 218 (221)
Q Consensus 217 ~~ 218 (221)
++
T Consensus 513 ~~ 514 (531)
T 3fz3_A 513 YN 514 (531)
T ss_dssp HS
T ss_pred hc
Confidence 85
No 7
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.95 E-value=4.5e-27 Score=219.27 Aligned_cols=146 Identities=15% Similarity=0.247 Sum_probs=135.9
Q ss_pred CCCCc-ccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCC-eEEEEEecC
Q 027585 70 KEGNT-TIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNN-VFYSKVLSA 147 (221)
Q Consensus 70 ~~~~~-~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~-~~~~~~L~~ 147 (221)
..+++ ++.|++++.++..+||+|+++++++++++++||++.+||||+++.|++||++|++++++++++| +++..+|++
T Consensus 344 ~~~~~~~~~gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~ 423 (510)
T 3c3v_A 344 RSPDIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQE 423 (510)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCeEEEEeccccCcccccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcC
Confidence 34556 8899999999999999999999999999999999999999999999999999999999998764 677788999
Q ss_pred CcEEEECCCCeEEEEecCCccEEEEEEEcCCCCeeeecc--chhhcCCCCCCHHHHHhhcCCCHHHHHHHHhhh
Q 027585 148 GEMFVIPRGLIHFQQNVGEGKALAFTAFNSHLPGAVIVP--TTLFASTPSVPNQVLTKTFQVDDDLISTIKSKF 219 (221)
Q Consensus 148 GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~~~~vla~~f~l~~~~v~~l~~~~ 219 (221)
||+++||+|.+|++.| +++++.+++++++++|+...++ .++|++ +|++||+++|+++.+++++|++.+
T Consensus 424 GDv~viP~G~~H~~~N-g~e~l~~l~f~~s~~p~~~~LaG~~svf~~---lp~eVla~aF~v~~e~v~~L~~~~ 493 (510)
T 3c3v_A 424 GHVLVVPQNFAVAGKS-QSDNFEYVAFKTDSRPSIANLAGENSVIDN---LPEEVVANSYGLPREQARQLKNNN 493 (510)
T ss_dssp TCEEEECTTCEEEEEE-CSSEEEEEEEESSSSCCEEESSSTTSTTTT---SCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred CcEEEECCCCeEEEEe-CCCCEEEEEEECCCCcceeecccHhHHHHh---CCHHHHHHHHCcCHHHHHHHHhhC
Confidence 9999999999999999 8889999999988999999998 788886 999999999999999999999865
No 8
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.95 E-value=6.6e-27 Score=217.14 Aligned_cols=146 Identities=17% Similarity=0.286 Sum_probs=135.6
Q ss_pred CCCCc-ccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCC-eEEEEEecC
Q 027585 70 KEGNT-TIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNN-VFYSKVLSA 147 (221)
Q Consensus 70 ~~~~~-~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~-~~~~~~L~~ 147 (221)
..+++ ++.|++++.++..+||+++++++++++++++||++.+||||+++.|++||++|++++++++++| +.+..+|++
T Consensus 310 ~~~~~~~~~gG~v~~~~~~~~P~L~~l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~ 389 (476)
T 1fxz_A 310 SSPDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQE 389 (476)
T ss_dssp SCCSEEETTTEEEEEECTTTSGGGTTTTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCeEEEEeccccCcccccCcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcC
Confidence 34456 8899999999999999999999999999999999999999999999999999999999998764 667788999
Q ss_pred CcEEEECCCCeEEEEecCCccEEEEEEEcCCCCeeeecc--chhhcCCCCCCHHHHHhhcCCCHHHHHHHHhhh
Q 027585 148 GEMFVIPRGLIHFQQNVGEGKALAFTAFNSHLPGAVIVP--TTLFASTPSVPNQVLTKTFQVDDDLISTIKSKF 219 (221)
Q Consensus 148 GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~~~~vla~~f~l~~~~v~~l~~~~ 219 (221)
||+++||+|.+|++.| |++++.+++++++++|+...++ .++|++ +|++||+++|++|.+++++|++.+
T Consensus 390 GDv~viP~G~~H~~~n-g~~~l~~l~f~~s~~p~~~~laG~~s~~~~---~p~~Vla~af~~~~~~v~~l~~~~ 459 (476)
T 1fxz_A 390 GRVLIVPQNFVVAARS-QSDNFEYVSFKTNDTPMIGTLAGANSLLNA---LPEEVIQHTFNLKSQQARQIKNNN 459 (476)
T ss_dssp TCEEEECTTCEEEEEE-CSTTEEEEEEESSSSCCEEESSSTTCTGGG---SCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred CCEEEECCCCeEEEEe-CCCCEEEEEEECCCCCceeEccchhHHHHh---CCHHHHHHHhCcCHHHHHHHHhhC
Confidence 9999999999999999 8899999999988999999997 788886 999999999999999999999865
No 9
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.95 E-value=3.4e-27 Score=217.57 Aligned_cols=155 Identities=18% Similarity=0.180 Sum_probs=135.2
Q ss_pred ccCCeEEecccCCCCcccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCC
Q 027585 59 TSGDFFFDGLSKEGNTTIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNN 138 (221)
Q Consensus 59 ~~~df~~~~l~~~~~~~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~ 138 (221)
....+.|+.+.++...++.|++++.+++.+||+|+++|++++++++.||++.+||||+++.|++||++|++++++.++++
T Consensus 243 ~~~~~~~~l~~~~p~~~~~~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~ 322 (445)
T 2cav_A 243 SSQDKPFNLRSRDPIYSNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQ 322 (445)
T ss_dssp ---CCCEETTSSCCSEESSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC--
T ss_pred CCcccceeccccCCCccCCCceEEEeChHHCcccccCCCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCCC
Confidence 34567888666554447888899999999999999999999999999999999999999999999999999999998863
Q ss_pred ---------e--EEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE-cCCCCeeeecc---chhhcCCCCCCHHHHHh
Q 027585 139 ---------V--FYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF-NSHLPGAVIVP---TTLFASTPSVPNQVLTK 203 (221)
Q Consensus 139 ---------~--~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~-~s~~pg~~~~~---~~lf~~~p~~~~~vla~ 203 (221)
+ +++.+|++||+++||+|.+|++.|. +++.++++. ++++|+.+.++ .++|++ +|++||++
T Consensus 323 ~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~~---~p~~vla~ 397 (445)
T 2cav_A 323 QQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA--SDLNMVGIGVNAENNERNFLAGHKENVIRQ---IPRQVSDL 397 (445)
T ss_dssp ---------CCEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEESCTTCCEEESSSSTTBSGGG---SCHHHHHH
T ss_pred cccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC--CCeEEEEEEccCCCCCcEEcccchhhhhhh---CCHHHHHH
Confidence 3 6899999999999999999999998 467777766 45689999998 688886 99999999
Q ss_pred hcCCCHHHHHHHHhh
Q 027585 204 TFQVDDDLISTIKSK 218 (221)
Q Consensus 204 ~f~l~~~~v~~l~~~ 218 (221)
+|++|.+++++|++.
T Consensus 398 af~v~~~~v~~l~~~ 412 (445)
T 2cav_A 398 TFPGSGEEVEELLEN 412 (445)
T ss_dssp HSSSCHHHHHHHHHH
T ss_pred HHCcCHHHHHHHHhc
Confidence 999999999999875
No 10
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.95 E-value=5.1e-27 Score=214.89 Aligned_cols=156 Identities=17% Similarity=0.139 Sum_probs=138.0
Q ss_pred cccCCeEEecccCCCCcccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecC
Q 027585 58 VTSGDFFFDGLSKEGNTTIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTN 137 (221)
Q Consensus 58 ~~~~df~~~~l~~~~~~~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~ 137 (221)
.....+.|+.+..+......+|+++.+++.+||+|++++++++++++.||++.+||||+++.|++||++|++++++.+++
T Consensus 210 ~~~~~~~~~l~~~~p~~~~~~G~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~ 289 (416)
T 1uij_A 210 ISSEDEPFNLRSRNPIYSNNFGKFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIK 289 (416)
T ss_dssp GGCSSSCEETTSSCCSEECSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC
T ss_pred CCCcccceeccccCCCccCCCceEEEEChHHCccchhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCC
Confidence 34567888866554444667779999999999999999999999999999999999999999999999999999999986
Q ss_pred C--------------eEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEEcC-CCCeeeecc---chhhcCCCCCCHH
Q 027585 138 N--------------VFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFNS-HLPGAVIVP---TTLFASTPSVPNQ 199 (221)
Q Consensus 138 ~--------------~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s-~~pg~~~~~---~~lf~~~p~~~~~ 199 (221)
| +.+..+|++||+++||+|.+|++.|. +++.+++++++ ++|+...++ .++|+. +|++
T Consensus 290 g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~f~~~~~~~~~~~laG~~~sv~~~---~p~~ 364 (416)
T 1uij_A 290 EQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLAFGINAENNQRNFLAGEKDNVVRQ---IERQ 364 (416)
T ss_dssp ------------CCEEEEEEEEETTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBSGGG---SCHH
T ss_pred CccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEEcCCCCCcceecccchhhHHHh---CCHH
Confidence 6 46777999999999999999999998 57999998855 599999887 678886 9999
Q ss_pred HHHhhcCCCHHHHHHHHhh
Q 027585 200 VLTKTFQVDDDLISTIKSK 218 (221)
Q Consensus 200 vla~~f~l~~~~v~~l~~~ 218 (221)
||+++|+++.+++++|++.
T Consensus 365 vla~af~~~~~~v~~l~~~ 383 (416)
T 1uij_A 365 VQELAFPGSAQDVERLLKK 383 (416)
T ss_dssp HHHHHSSSCHHHHHHHTTS
T ss_pred HHHHHHCcCHHHHHHHHhc
Confidence 9999999999999999874
No 11
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.94 E-value=4e-27 Score=219.34 Aligned_cols=152 Identities=18% Similarity=0.312 Sum_probs=137.6
Q ss_pred eEEeccc-CCCCc-ccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecC-Ce
Q 027585 63 FFFDGLS-KEGNT-TIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTN-NV 139 (221)
Q Consensus 63 f~~~~l~-~~~~~-~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~-~~ 139 (221)
+.++... .++++ ++.|++++.+++.+||+++++++++++++++||++.+||||+++.|++||++|++++++++++ ++
T Consensus 331 l~~ni~~~~~~~~~~~~gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~ 410 (493)
T 2d5f_A 331 LHENIARPSRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNA 410 (493)
T ss_dssp CEEECCCGGGCSEEETTTEEEEEESTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCE
T ss_pred eeecccccCCCCcccCCCeEEEEeccccCccccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCE
Confidence 4444322 56677 899999999999999999999999999999999999999999999999999999999999876 46
Q ss_pred EEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEEcCCCCeeeeccchhhcCCCCCCHHHHHhhcCCCHHHHHHHHhhh
Q 027585 140 FYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFNSHLPGAVIVPTTLFASTPSVPNQVLTKTFQVDDDLISTIKSKF 219 (221)
Q Consensus 140 ~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~lf~~~p~~~~~vla~~f~l~~~~v~~l~~~~ 219 (221)
++..+|++||+++||+|.+|+..| +++++++++++++++|+...+ .++|++ +|++||+++|+++.+++++|++..
T Consensus 411 ~~~~~l~~GDv~vvP~G~~H~~~n-~~e~~~~l~~~ts~~p~~~~l-~s~~~~---~p~eVla~aF~v~~~~v~~l~~~~ 485 (493)
T 2d5f_A 411 VFDGELRRGQLLVVPQNFVVAEQG-GEQGLEYVVFKTHHNAVSSYI-KDVFRA---IPSEVLSNSYNLGQSQVRQLKYQG 485 (493)
T ss_dssp EEEEEEETTCEEEECTTCEEEEEE-EEEEEEEEEEESSTTCCEEEH-HHHHHH---SCHHHHHHHHTCCHHHHHHHHHSS
T ss_pred EEeEEEcCCCEEEECCCCeEeeee-CCCCEEEEEEECCCCCcceeH-HHHHHh---CCHHHHHHHHCcCHHHHHHHHhcC
Confidence 667889999999999999999998 568999999999999999999 778886 999999999999999999999763
No 12
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.94 E-value=1.2e-26 Score=213.41 Aligned_cols=156 Identities=17% Similarity=0.178 Sum_probs=137.7
Q ss_pred cccCCeEEecccCCCCcccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecC
Q 027585 58 VTSGDFFFDGLSKEGNTTIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTN 137 (221)
Q Consensus 58 ~~~~df~~~~l~~~~~~~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~ 137 (221)
.....+.|+...++......|++++.+++.+||+|++++++++++++.||++.+||||+++.|++||++|++++++++++
T Consensus 227 ~~~~~~~~~l~~~~p~~~~~gG~v~~~~~~~~P~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~ 306 (434)
T 2ea7_A 227 LSSQDEPFNLRNSKPIYSNKFGRWYEMTPEKNPQLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGLS 306 (434)
T ss_dssp TTCSSSCEETTSSCCSEEETTEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEEE
T ss_pred CCCcccceeeccCCCceeCCCcEEEEEChhhCccccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEecC
Confidence 34556788866555444778889999999999999999999999999999999999999999999999999999999875
Q ss_pred C-------------eEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEEc-CCCCeeeecc---chhhcCCCCCCHHH
Q 027585 138 N-------------VFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFN-SHLPGAVIVP---TTLFASTPSVPNQV 200 (221)
Q Consensus 138 ~-------------~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~-s~~pg~~~~~---~~lf~~~p~~~~~v 200 (221)
| +.+..+|++||+++||+|.+|++.|. +++.+++++. +++++...++ .++|++ +|++|
T Consensus 307 g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~~---~p~~v 381 (434)
T 2ea7_A 307 DQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINAT--SNLNFFAFGINAENNRRNFLAGGKDNVMSE---IPTEV 381 (434)
T ss_dssp ECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBGGGG---SCHHH
T ss_pred ccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEECCCCCCCceecccchhhhhhh---CCHHH
Confidence 4 26677999999999999999999998 5788888774 4589999888 678886 99999
Q ss_pred HHhhcCCCHHHHHHHHhh
Q 027585 201 LTKTFQVDDDLISTIKSK 218 (221)
Q Consensus 201 la~~f~l~~~~v~~l~~~ 218 (221)
|+++|+++.+++++|++.
T Consensus 382 la~af~v~~~~v~~l~~~ 399 (434)
T 2ea7_A 382 LEVSFPASGKKVEKLIKK 399 (434)
T ss_dssp HHHHSSSCHHHHHHHHTT
T ss_pred HHHHHCcCHHHHHHHHhc
Confidence 999999999999999874
No 13
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.93 E-value=1.2e-25 Score=183.68 Aligned_cols=150 Identities=13% Similarity=0.143 Sum_probs=124.2
Q ss_pred CCeEEecccCCCCcccCCeeEEEeec-----cccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEe
Q 027585 61 GDFFFDGLSKEGNTTIFGSAVTPANV-----LAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFT 135 (221)
Q Consensus 61 ~df~~~~l~~~~~~~~~g~~v~~~~~-----~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~ 135 (221)
+.|+|+...........||+++.++. ..+|+++ ++++.+++++||+..++| |++++|++||++|++++++++
T Consensus 2 ~p~~f~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~~ 78 (178)
T 1dgw_A 2 NPYLFRSNKFLTLFKNQHGSLRLLQRFNEDTEKLENLR--DYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVN 78 (178)
T ss_dssp CTTEECGGGEEEEEEETTEEEEEECCTTSSCGGGGGGT--TEEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEEE
T ss_pred CCceechhhcccceEcCCCEEEEEcccCCcchhcCCcC--cEEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEEe
Confidence 35778744332222788999999877 6788877 489999999999999999 988899999999999999986
Q ss_pred cCCeEEEEEecCCcEEEECCCCeEEEEecCCc-cEEEEEEE-cCCCCeeee---cc-----chhhcCCCCCCHHHHHhhc
Q 027585 136 TNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEG-KALAFTAF-NSHLPGAVI---VP-----TTLFASTPSVPNQVLTKTF 205 (221)
Q Consensus 136 ~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~-~a~~l~~~-~s~~pg~~~---~~-----~~lf~~~p~~~~~vla~~f 205 (221)
++|. .++.|++||+++||+|.+|+++|.|++ ++++++++ ++++||.+. ++ .++|+. +|+|||+++|
T Consensus 79 ~~~~-~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~~~~g~~~~~~l~g~~~~~~~~~~---~p~~vla~af 154 (178)
T 1dgw_A 79 PDGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSA---FSKNFLEASY 154 (178)
T ss_dssp TTEE-EEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGGG---SCHHHHHHHH
T ss_pred CCCc-EEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECCCCCCCceEEeeccCCcCcchhhhh---CCHHHHHHHH
Confidence 5432 388999999999999999999999986 78888875 556787433 22 467775 9999999999
Q ss_pred CCCHHHHHHHHh
Q 027585 206 QVDDDLISTIKS 217 (221)
Q Consensus 206 ~l~~~~v~~l~~ 217 (221)
++|++++++|+.
T Consensus 155 ~v~~~~~~~l~~ 166 (178)
T 1dgw_A 155 DSPYDEIEQTLL 166 (178)
T ss_dssp TSCHHHHHHHTT
T ss_pred CcCHHHHHHHhc
Confidence 999999999984
No 14
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.93 E-value=7.7e-26 Score=206.94 Aligned_cols=153 Identities=13% Similarity=0.118 Sum_probs=134.0
Q ss_pred CCeEEecccCCCCcccCCeeEEEeecccc-CCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCC-
Q 027585 61 GDFFFDGLSKEGNTTIFGSAVTPANVLAF-PGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNN- 138 (221)
Q Consensus 61 ~df~~~~l~~~~~~~~~g~~v~~~~~~~f-P~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~- 138 (221)
..+.|+...+++...+.+|+++.+++.+| |+|+++|++++++++.||++.+||||+++.|++||++|++++++.++++
T Consensus 226 ~~~~~nl~~~~p~~~n~~G~~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~ 305 (418)
T 3s7i_A 226 ITNPINLREGEPDLSNNFGKLFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRKE 305 (418)
T ss_dssp CCCCEETTCSCCSEEETTEEEEEECSBTTBHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEEC
T ss_pred CCcccccccCCCceeCCCCeEEEechHHcchhhccCCeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCCc
Confidence 37888876655544666778899999999 9999999999999999999999999999999999999999999998654
Q ss_pred ------------------------eEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE-cCCCCeeeeccc---hhh
Q 027585 139 ------------------------VFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF-NSHLPGAVIVPT---TLF 190 (221)
Q Consensus 139 ------------------------~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~-~s~~pg~~~~~~---~lf 190 (221)
+.+...|++||+++||+|.+|++.|.+ +++++++. ++++|+.+.++. ++|
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~--~l~~v~f~~~~~~~~~~~LAG~~~sv~ 383 (418)
T 3s7i_A 306 QQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINASS--ELHLLGFGINAENNHRIFLAGDKDNVI 383 (418)
T ss_dssp -------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEESS--CEEEEEEEESCTTCCEEESSSSTTBHH
T ss_pred cccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEECCC--CEEEEEEEcCCCCCcceEccCchhhhh
Confidence 567899999999999999999999854 47777654 456899999885 678
Q ss_pred cCCCCCCHHHHHhhcCCCHHHHHHHHhh
Q 027585 191 ASTPSVPNQVLTKTFQVDDDLISTIKSK 218 (221)
Q Consensus 191 ~~~p~~~~~vla~~f~l~~~~v~~l~~~ 218 (221)
+. +|+++|+++|++|.+++++|++.
T Consensus 384 ~~---~~~evla~af~v~~~~v~~L~~~ 408 (418)
T 3s7i_A 384 DQ---IEKQAKDLAFPGSGEQVEKLIKN 408 (418)
T ss_dssp HH---SCHHHHHHHSSSCHHHHHHHHHT
T ss_pred hc---CCHHHHHHHhCCCHHHHHHHHhc
Confidence 85 99999999999999999999874
No 15
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.91 E-value=9.5e-24 Score=188.37 Aligned_cols=159 Identities=22% Similarity=0.295 Sum_probs=141.3
Q ss_pred CcccccCCeEEecccCCCCcccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEE
Q 027585 55 AAEVTSGDFFFDGLSKEGNTTIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFF 134 (221)
Q Consensus 55 p~~~~~~df~~~~l~~~~~~~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~ 134 (221)
+.....++|+|+.+..++..+..|+.++.+....+|++++ +++.+++++||+..++|||+++.|++||++|++++++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~--~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v~ 271 (361)
T 2vqa_A 194 QTAKIEVPHTHNLLGQQPLVSLGGNELRLASAKEFPGSFN--MTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVF 271 (361)
T ss_dssp CCCBCCSCCEEECTTSCCSEEETTEEEEEECTTTCTTSTT--CEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEEE
T ss_pred cCCCCCcceEeccccCCCcccCCCceEEEEehhhCcCccc--ceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEEE
Confidence 4456788999998776653377899999999999998774 67889999999999999999889999999999999997
Q ss_pred ecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEEcCCCCeeeeccchhhcCCCCCCHHHHHhhcCCCHHHHHH
Q 027585 135 TTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFNSHLPGAVIVPTTLFASTPSVPNQVLTKTFQVDDDLIST 214 (221)
Q Consensus 135 ~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~lf~~~p~~~~~vla~~f~l~~~~v~~ 214 (221)
+.+|+..++.|++||++++|+|.+|++.|.|++++++++++++++++...++.++ +. +|++||+++|+++++++++
T Consensus 272 ~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~~~~~~~~-~~---~~~~vl~~~f~~~~~~~~~ 347 (361)
T 2vqa_A 272 ASEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDGDYQSIDLSTWL-AS---NPSSVLGNTFQISPELTKK 347 (361)
T ss_dssp CSTTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSSSCCCEEHHHHH-HT---SCHHHHHHHHTCCHHHHTT
T ss_pred cCCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCCCcceeeHHHHh-hh---CCHHHHHHHHCcCHHHHHh
Confidence 7667666899999999999999999999999999999999999999999998765 54 9999999999999999999
Q ss_pred HHhhh
Q 027585 215 IKSKF 219 (221)
Q Consensus 215 l~~~~ 219 (221)
||+..
T Consensus 348 l~~~~ 352 (361)
T 2vqa_A 348 LPVQD 352 (361)
T ss_dssp SCCSC
T ss_pred hhccC
Confidence 98754
No 16
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.91 E-value=6.8e-24 Score=192.93 Aligned_cols=141 Identities=21% Similarity=0.183 Sum_probs=122.0
Q ss_pred ccCCCCc-ccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEec------CC-e
Q 027585 68 LSKEGNT-TIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTT------NN-V 139 (221)
Q Consensus 68 l~~~~~~-~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~------~~-~ 139 (221)
+....+. ...+|+++.+++.+ ++++++++++.||++.+||||+++.|+.||++|+++++++++ ++ +
T Consensus 215 l~~~~p~~~n~~G~~~~v~~~~------l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~ 288 (397)
T 2phl_A 215 LSKQDNTIGNEFGNLTERTDNS------LNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYE 288 (397)
T ss_dssp -----CEEEETTEEEEEEEETT------TTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEE
T ss_pred ccccCCcccCCCCeEEEEeecc------CCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCce
Confidence 3333344 67788899999877 789999999999999999999999999999999999999987 44 8
Q ss_pred EEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEEc-CCCCeeeecc---chhhcCCCCCC-----HHHHHhhcCCCHH
Q 027585 140 FYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFN-SHLPGAVIVP---TTLFASTPSVP-----NQVLTKTFQVDDD 210 (221)
Q Consensus 140 ~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~-s~~pg~~~~~---~~lf~~~p~~~-----~~vla~~f~l~~~ 210 (221)
+++.+|++||+++||+|.+|++.|.+ ++.++++.+ +++|+.+.++ .++|++ +| ++||+++|+++++
T Consensus 289 ~~~~~l~~GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s~~~~~~~laG~~~sv~~~---~p~~~~~~eVla~af~v~~~ 363 (397)
T 2phl_A 289 SYRAELSKDDVFVIPAAYPVAIKATS--NVNFTGFGINANNNNRNLLAGKTDNVISS---IGRALDGKDVLGLTFSGSGD 363 (397)
T ss_dssp EEEEEEETTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSSSBHHHH---HHTSTTHHHHHHHHSSSCHH
T ss_pred EEEEEecCCCEEEECCCCeEEEEeCC--CeEEEEEECCCCCCcceecccchhhHHhh---CCCccchHHHHHHHhCcCHH
Confidence 89999999999999999999999985 788888665 4589998888 788887 66 9999999999999
Q ss_pred HHHHHHhhh
Q 027585 211 LISTIKSKF 219 (221)
Q Consensus 211 ~v~~l~~~~ 219 (221)
++++|++..
T Consensus 364 ~v~~l~~~~ 372 (397)
T 2phl_A 364 EVMKLINKQ 372 (397)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHhcC
Confidence 999999864
No 17
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.89 E-value=9.4e-23 Score=187.97 Aligned_cols=153 Identities=12% Similarity=0.130 Sum_probs=125.0
Q ss_pred cCCeEEecccCCCCcccCCeeEEEeec--cccCCCcccc-eEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEec
Q 027585 60 SGDFFFDGLSKEGNTTIFGSAVTPANV--LAFPGVNTLG-ISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTT 136 (221)
Q Consensus 60 ~~df~~~~l~~~~~~~~~g~~v~~~~~--~~fP~l~~~g-is~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~ 136 (221)
.+.|+|+...........++.+..++. ...|.+++++ +++++++++||+..++| |++++|++||++|++++++.++
T Consensus 46 ~~p~vf~~~~~~~~i~~e~G~i~~l~~~~~~~~~l~~~g~~s~~~~~l~Pgg~~~pH-h~~a~E~~yVl~G~g~v~~v~~ 124 (445)
T 2cav_A 46 NNPYLFRSNKFLTLFKNQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVNP 124 (445)
T ss_dssp CCTTEECGGGEEEEEEETTEEEEEECCTTSSCSTTGGGTTEEEEEEEECSSEEEEEE-EESSEEEEEEEESEEEEEEEET
T ss_pred CCCeEEchhhcCceEEcCCEEEEEEeccCcccccccccCcEEEEEEEECCCcCccCc-CCCCceEEEEEeCEEEEEEEeC
Confidence 455777733221112456888888654 4556888877 99999999999999999 7778999999999999999876
Q ss_pred CCeEEEEEecCCcEEEECCCCeEEEEecC-CccEEEEEEEc-CCCCee---eecc-----chhhcCCCCCCHHHHHhhcC
Q 027585 137 NNVFYSKVLSAGEMFVIPRGLIHFQQNVG-EGKALAFTAFN-SHLPGA---VIVP-----TTLFASTPSVPNQVLTKTFQ 206 (221)
Q Consensus 137 ~~~~~~~~L~~GDv~~~P~g~~H~~~N~g-~~~a~~l~~~~-s~~pg~---~~~~-----~~lf~~~p~~~~~vla~~f~ 206 (221)
+++ +++.|++||++++|+|..|+++|.| +++++++++++ +++|+. +.++ .++|+. +|++||+++|+
T Consensus 125 ~~~-~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~~~~~~pg~~~~F~laG~~~~~~~~~~---~~~~vLa~af~ 200 (445)
T 2cav_A 125 DGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSA---FSKNFLEASYD 200 (445)
T ss_dssp TEE-EEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGGG---SCHHHHHHHHT
T ss_pred CCC-EEEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEeccCCCCCceeeeeccCCCchhhhhhc---CCHHHHHHHhC
Confidence 554 6899999999999999999999998 89999999987 556763 3344 367775 99999999999
Q ss_pred CCHHHHHHHHh
Q 027585 207 VDDDLISTIKS 217 (221)
Q Consensus 207 l~~~~v~~l~~ 217 (221)
+|.+++++|++
T Consensus 201 v~~~~v~~l~~ 211 (445)
T 2cav_A 201 SPYDEIEQTLL 211 (445)
T ss_dssp SCHHHHHHHTT
T ss_pred CCHHHHHhhhc
Confidence 99999999984
No 18
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.88 E-value=1e-22 Score=186.30 Aligned_cols=152 Identities=15% Similarity=0.211 Sum_probs=124.0
Q ss_pred cCCeEEecccCCCCc-ccCCeeEEEeec--cccCCCcccc-eEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEe
Q 027585 60 SGDFFFDGLSKEGNT-TIFGSAVTPANV--LAFPGVNTLG-ISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFT 135 (221)
Q Consensus 60 ~~df~~~~l~~~~~~-~~~g~~v~~~~~--~~fP~l~~~g-is~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~ 135 (221)
.+.|+|+-....... ...||.++.+.. ...+.+++.+ +++++++++||+..+|| |++++|++||++|++++++.+
T Consensus 8 ~~p~~f~~~~~~~~~~~~e~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~E~~yVl~G~g~v~~v~ 86 (416)
T 1uij_A 8 NNPFYFRSSNSFQTLFENQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPH-HADADFLLFVLSGRAILTLVN 86 (416)
T ss_dssp SCTTEECGGGSEEEEEECSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESCEEEEEEC
T ss_pred CCCeEecccccccceEEcCCEEEEEEeccCCccccccCcccEEEEEEEeccCcCcccc-cCCCceEEEEEeeEEEEEEEE
Confidence 356777722222233 667888888633 3447788887 99999999999999999 778899999999999999987
Q ss_pred cCCeEEEEEecCCcEEEECCCCeEEEEecC-CccEEEEEEEc-CCCCee---eeccc-----hhhcCCCCCCHHHHHhhc
Q 027585 136 TNNVFYSKVLSAGEMFVIPRGLIHFQQNVG-EGKALAFTAFN-SHLPGA---VIVPT-----TLFASTPSVPNQVLTKTF 205 (221)
Q Consensus 136 ~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g-~~~a~~l~~~~-s~~pg~---~~~~~-----~lf~~~p~~~~~vla~~f 205 (221)
+ |+.+++.+++||+++||+|..|+++|.| ++++++++++. +++|+. +.++. ++|+. +|++||+++|
T Consensus 87 ~-~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e~l~~l~~~~~~~~pg~~~~f~l~g~~~~~~~~~~---~~~~vLa~af 162 (416)
T 1uij_A 87 N-DDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLAIPVNKPGRYDDFFLSSTQAQQSYLQG---FSHNILETSF 162 (416)
T ss_dssp S-SCEEEEEECTTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEESSCBSSCCCGGGG---SCHHHHHHHH
T ss_pred C-CCCeEEEecCCCEEEECCCCeEEEEecCCCCCEEEEEEeccCCCCCcceeeeecCCcccchhhhc---CCHHHHHHHh
Confidence 6 5556899999999999999999999995 99999999985 566653 34443 36675 9999999999
Q ss_pred CCCHHHHHHHH
Q 027585 206 QVDDDLISTIK 216 (221)
Q Consensus 206 ~l~~~~v~~l~ 216 (221)
++|.+++++|+
T Consensus 163 ~v~~~~v~~l~ 173 (416)
T 1uij_A 163 HSEFEEINRVL 173 (416)
T ss_dssp TSCHHHHHHHH
T ss_pred CcCHHHHHhhh
Confidence 99999999998
No 19
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.88 E-value=8.2e-23 Score=188.88 Aligned_cols=140 Identities=18% Similarity=0.264 Sum_probs=119.8
Q ss_pred ccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-E-------------
Q 027585 75 TIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-F------------- 140 (221)
Q Consensus 75 ~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~------------- 140 (221)
...+|.+..++ ...|+|+++|+++++++++||+..+||||+ +.|++||++|+++++++.++++ .
T Consensus 42 ~se~G~~~~~~-~~~~~l~~~gvs~~r~~i~pggl~~Ph~h~-a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~ 119 (459)
T 2e9q_A 42 EAEAGFTEVWD-QDNDEFQCAGVNMIRHTIRPKGLLLPGFSN-APKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGS 119 (459)
T ss_dssp EETTEEEEECC-TTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEEECCC-------
T ss_pred ecCCcEEEecC-CCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEeeEEEEEEEeCCCcchhccchhhcccccc
Confidence 56677776655 456999999999999999999999999997 6999999999999999976532 1
Q ss_pred -------EEEEecCCcEEEECCCCeEEEEecCCccEEEEEEEcCCC--------Ceeeecc-------------------
Q 027585 141 -------YSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFNSHL--------PGAVIVP------------------- 186 (221)
Q Consensus 141 -------~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~--------pg~~~~~------------------- 186 (221)
..+.|++||+++||+|++||++|.|++++++++++++.+ +..+.++
T Consensus 120 ~~~d~~q~~~~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ 199 (459)
T 2e9q_A 120 AFKDQHQKIRPFREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWERSSRK 199 (459)
T ss_dssp CCCEEECCCEEEETTEEEEECTTCCEEEEECSSSCEEEEEEEESSSTTCCSCSSCCEEESSSCCCCCSSTTCC-------
T ss_pred ccccccceeEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCCcccccCcccceeeccCCccccchhhhcccccccc
Confidence 257999999999999999999999999999999998665 3344444
Q ss_pred -------chhhcCCCCCCHHHHHhhcCCCHHHHHHHHhhh
Q 027585 187 -------TTLFASTPSVPNQVLTKTFQVDDDLISTIKSKF 219 (221)
Q Consensus 187 -------~~lf~~~p~~~~~vla~~f~l~~~~v~~l~~~~ 219 (221)
.++|+. +|+++|+++|++|.++++||++..
T Consensus 200 ~~~~~~~~nif~g---f~~evLa~aF~v~~~~v~kL~~~~ 236 (459)
T 2e9q_A 200 GSSGEKSGNIFSG---FADEFLEEAFQIDGGLVRKLKGED 236 (459)
T ss_dssp -----CCCCTTTT---SCHHHHHHHHTCCHHHHHHHHTTT
T ss_pred ccccccccchhhc---CCHHHHHhhcCCCHHHHHhhhhcc
Confidence 378885 999999999999999999999754
No 20
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.88 E-value=2.4e-22 Score=184.76 Aligned_cols=152 Identities=16% Similarity=0.176 Sum_probs=124.7
Q ss_pred cCCeEEecccCCCCc-ccCCeeEEEeec--cccCCCcccc-eEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEe
Q 027585 60 SGDFFFDGLSKEGNT-TIFGSAVTPANV--LAFPGVNTLG-ISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFT 135 (221)
Q Consensus 60 ~~df~~~~l~~~~~~-~~~g~~v~~~~~--~~fP~l~~~g-is~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~ 135 (221)
.+.|.|+...--... ...+|.++.+.. .+.|.+++.+ +++++++++||+..+|| |++++|++||++|++++++.+
T Consensus 20 ~~p~~f~~~~~~~~~~~se~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~Ei~yVl~G~g~v~~v~ 98 (434)
T 2ea7_A 20 NNPFYFNSDRWFRTLYRNEWGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPH-HADADFLLVVLNGTAVLTLVN 98 (434)
T ss_dssp GCTTEECTTTSEEEEEEETTEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEEC
T ss_pred CCCeEEeccccccceEEcCCEEEEEEeccCCcccccCccccEEEEEEEecCCcCccCc-cCCCceEEEEEecEEEEEEEe
Confidence 356777722201123 567888888643 5567888888 99999999999999999 888899999999999999987
Q ss_pred cCCeEEEEEecCCcEEEECCCCeEEEEecC-CccEEEEEEEc-CCCCee---eeccc-----hhhcCCCCCCHHHHHhhc
Q 027585 136 TNNVFYSKVLSAGEMFVIPRGLIHFQQNVG-EGKALAFTAFN-SHLPGA---VIVPT-----TLFASTPSVPNQVLTKTF 205 (221)
Q Consensus 136 ~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g-~~~a~~l~~~~-s~~pg~---~~~~~-----~lf~~~p~~~~~vla~~f 205 (221)
+ ++.+++.|++||++++|+|..||++|.| ++++++++++. +++|+. +.++. ++|+. +|++||+++|
T Consensus 99 ~-~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~~l~~~~~s~~pg~~~~f~l~g~~~~~~~~~~---~~~~vLa~af 174 (434)
T 2ea7_A 99 P-DSRDSYILEQGHAQKIPAGTTFFLVNPDDNENLRIIKLAIPVNNPHRFQDFFLSSTEAQQSYLRG---FSKNILEASF 174 (434)
T ss_dssp S-SCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEECSCCSSCCCGGGG---SCHHHHHHHH
T ss_pred C-CCCEEEEeCCCCEEEECCCccEEEEeCCCCCCeEEEEEecCCCCCCceeeeeecCCcchhhhhhc---CCHHHHHHHh
Confidence 4 4567899999999999999999999998 88999999874 566653 34443 36675 9999999999
Q ss_pred CCCHHHHHHHH
Q 027585 206 QVDDDLISTIK 216 (221)
Q Consensus 206 ~l~~~~v~~l~ 216 (221)
++|.+++++|+
T Consensus 175 ~v~~~~v~~l~ 185 (434)
T 2ea7_A 175 DSDFKEINRVL 185 (434)
T ss_dssp TSCHHHHHHHH
T ss_pred CCCHHHHHhhh
Confidence 99999999998
No 21
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.88 E-value=2.6e-22 Score=182.53 Aligned_cols=152 Identities=12% Similarity=0.119 Sum_probs=125.9
Q ss_pred cCCeEEecccCCCCc-ccCCeeEEEe--eccccCCCcccc-eEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEe
Q 027585 60 SGDFFFDGLSKEGNT-TIFGSAVTPA--NVLAFPGVNTLG-ISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFT 135 (221)
Q Consensus 60 ~~df~~~~l~~~~~~-~~~g~~v~~~--~~~~fP~l~~~g-is~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~ 135 (221)
.+.|+|.....-.+. ...+|.++.+ .....|++++++ +++++++++||+..+|||| +++|++||++|++++++++
T Consensus 11 ~~p~~f~~~~~~~~~~~~e~G~i~~l~~~~~~~~~l~~~~~~s~~~~~l~pgg~~~ph~~-~a~ei~yVl~G~~~v~~v~ 89 (397)
T 2phl_A 11 DNPFYFNSDNSWNTLFKNQYGHIRVLQRFDQQSKRLQNLEDYRLVEFRSKPETLLLPQQA-DAELLLVVRSGSAILVLVK 89 (397)
T ss_dssp CCTTEECGGGTEEEEEEETTEEEEEECCHHHHCGGGGGGTTCEEEEEEECSSEEEEEEEE-SEEEEEEEEESEEEEEEEE
T ss_pred CCCcEeccchhccceEEcCCEEEEEecccCCCChhhcccccEEEEEEEECCCcCccCEec-CCCeEEEEEeeeEEEEEEe
Confidence 456777733201133 7888999887 445668999988 9999999999999999999 5799999999999999998
Q ss_pred cCCeEEEEEecCCcE------EEECCCCeEEEEecC-CccEEEEEEEcCCC-C--eeeecc-----chhhcCCCCCCHHH
Q 027585 136 TNNVFYSKVLSAGEM------FVIPRGLIHFQQNVG-EGKALAFTAFNSHL-P--GAVIVP-----TTLFASTPSVPNQV 200 (221)
Q Consensus 136 ~~~~~~~~~L~~GDv------~~~P~g~~H~~~N~g-~~~a~~l~~~~s~~-p--g~~~~~-----~~lf~~~p~~~~~v 200 (221)
++++ +++.|++||+ ++||+|.+||++|.| ++++++++++.+.+ | ..+.++ .++|+. +|++|
T Consensus 90 ~~~~-~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l~~i~~~~~~~~~~~~~f~L~G~~~~~s~~~~---~~~~v 165 (397)
T 2phl_A 90 PDDR-REYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKEDLRIIQLAMPVNNPQIHEFFLSSTEAQQSYLQE---FSKHI 165 (397)
T ss_dssp TTTE-EEEEEEESSCTTSCSEEEECTTCEEEEEECCSSCCEEEEEEEEESSSSSCCEEECCCBTTBCCGGGG---SCHHH
T ss_pred CCCc-EEEEECCCCcccccceEEECCCCcEEEEeCCCCCCeEEEEeecCCCCccceeeeccCCCchhHHhhc---CCHHH
Confidence 7666 5899999999 999999999999999 78999999986443 3 334443 246675 99999
Q ss_pred HHhhcCCCHHHHHHHH
Q 027585 201 LTKTFQVDDDLISTIK 216 (221)
Q Consensus 201 la~~f~l~~~~v~~l~ 216 (221)
|+++|++|.+++++|+
T Consensus 166 La~af~v~~~~v~~l~ 181 (397)
T 2phl_A 166 LEASFNSKFEEINRVL 181 (397)
T ss_dssp HHHHHTSCHHHHHHHH
T ss_pred HHHHhCCCHHHHHhhh
Confidence 9999999999999999
No 22
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.87 E-value=3.2e-22 Score=185.75 Aligned_cols=140 Identities=13% Similarity=0.239 Sum_probs=119.6
Q ss_pred ccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeE--------------
Q 027585 75 TIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVF-------------- 140 (221)
Q Consensus 75 ~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~-------------- 140 (221)
...+|.+..++. ..|+++++|+++++++++||+..+||||+ +.|++||++|++.++++.++++.
T Consensus 27 ~se~G~~e~~~~-~~~~l~~~gvs~~r~~l~Pggl~~Ph~~~-a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~ 104 (476)
T 1fxz_A 27 ESEGGLIETWNP-NNKPFQCAGVALSRCTLNRNALRRPSYTN-GPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQS 104 (476)
T ss_dssp EETTEEEEECCT-TSHHHHHHTCEEEEEEECTTEEEEEEEES-SCEEEEEEECCEEEEEECTTCCCC-------------
T ss_pred ecCCceEEeeCC-CChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEecEEEEEEEcCCCcchhhccccccccccc
Confidence 567777777664 44899999999999999999999999998 69999999999999999865431
Q ss_pred --------EEEEecCCcEEEECCCCeEEEEecCCccEEEEEEEcCCCC--------eeeecc------------------
Q 027585 141 --------YSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFNSHLP--------GAVIVP------------------ 186 (221)
Q Consensus 141 --------~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~p--------g~~~~~------------------ 186 (221)
..+.|++||+++||+|++||++|.|+++++++++++..++ ..+.++
T Consensus 105 ~~~~d~~qk~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~ 184 (476)
T 1fxz_A 105 SRPQDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGGHQ 184 (476)
T ss_dssp -----CCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTHHHHC------
T ss_pred cccccccceEEEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecCCCcccccCCccceeeccCCcccccccccccccccc
Confidence 2689999999999999999999999999999999985553 344443
Q ss_pred --------------chhhcCCCCCCHHHHHhhcCCCHHHHHHHHhhh
Q 027585 187 --------------TTLFASTPSVPNQVLTKTFQVDDDLISTIKSKF 219 (221)
Q Consensus 187 --------------~~lf~~~p~~~~~vla~~f~l~~~~v~~l~~~~ 219 (221)
.++|+. +++++|+++|++|.++++||++..
T Consensus 185 ~~~~~~~~~~~~~~~~if~g---f~~~vLa~af~v~~~~~~kl~~~~ 228 (476)
T 1fxz_A 185 SQKGKHQQEEENEGGSILSG---FTLEFLEHAFSVDKQIAKNLQGEN 228 (476)
T ss_dssp -------------CCCGGGG---SCHHHHHHHHTCCHHHHHHHSCC-
T ss_pred ccccccccccccccchhhhc---CCHHHHHhhhCCCHHHHHhhhccc
Confidence 368885 999999999999999999998653
No 23
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.86 E-value=1.1e-21 Score=181.00 Aligned_cols=139 Identities=19% Similarity=0.340 Sum_probs=120.2
Q ss_pred ccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecC-CeEE------------
Q 027585 75 TIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTN-NVFY------------ 141 (221)
Q Consensus 75 ~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~-~~~~------------ 141 (221)
...||.+..++..+ +.++++|++++|++++||+..+|||| ++.|++||++|++++++..++ ++.+
T Consensus 29 ~se~G~~e~~d~~~-~~l~~~gvs~~R~~i~P~gl~~Ph~h-~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~ 106 (465)
T 3qac_A 29 QAERGLTEVWDSNE-QEFRCAGVSVIRRTIEPHGLLLPSFT-SAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGED 106 (465)
T ss_dssp EETTEEEEECCTTS-HHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEEECTTCCCCC------------
T ss_pred eCCCcEEEEECCCC-hhhcccceEEEEEEEcCCcCcccEEc-CCCEEEEEEECcEEEEEecCCCCceeecchhccccccc
Confidence 57788899888655 57888999999999999999999999 789999999999999998653 2322
Q ss_pred ------------------------EEEecCCcEEEECCCCeEEEEecCCccEEEEEEEcCCC---------Ceeeecc--
Q 027585 142 ------------------------SKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFNSHL---------PGAVIVP-- 186 (221)
Q Consensus 142 ------------------------~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~---------pg~~~~~-- 186 (221)
.+.+++||++++|+|+.||++|.|++++++++++++.| +..+.++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n~~nqld~~~~r~F~LaG~ 186 (465)
T 3qac_A 107 ERIREQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTANHANQLDKNFPTRFYLAGK 186 (465)
T ss_dssp ------------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTTSTTCCSCSSSCCEEESSSC
T ss_pred cccccccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCCcccccccccceeEEecCC
Confidence 46899999999999999999999999999999998754 4445554
Q ss_pred ----------------------chhhcCCCCCCHHHHHhhcCCCHHHHHHHHhh
Q 027585 187 ----------------------TTLFASTPSVPNQVLTKTFQVDDDLISTIKSK 218 (221)
Q Consensus 187 ----------------------~~lf~~~p~~~~~vla~~f~l~~~~v~~l~~~ 218 (221)
.++|+. +++++|+++|+++.++++||++.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~ni~sg---F~~e~La~Af~v~~~~~~kl~~~ 237 (465)
T 3qac_A 187 PQQEHSGEHQFSRESRRGERNTGNIFRG---FETRLLAESFGVSEEIAQKLQAE 237 (465)
T ss_dssp CCCSCC--------------CCCCGGGG---SCHHHHHHHHTCCHHHHHHHHTT
T ss_pred Cccccccccccccccccccccccchhhc---CCHHHHHHHhCCCHHHHHHhhhc
Confidence 368885 99999999999999999999753
No 24
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.86 E-value=1.9e-21 Score=177.92 Aligned_cols=135 Identities=16% Similarity=0.221 Sum_probs=113.2
Q ss_pred ccCCeeEEEee-----ccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCc
Q 027585 75 TIFGSAVTPAN-----VLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGE 149 (221)
Q Consensus 75 ~~~g~~v~~~~-----~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GD 149 (221)
...+|.++.+. ...+|+|++ +.+++++++|++..+|| |++++|++||++|+++++++++ |+.+.+.|++||
T Consensus 19 ~se~G~i~~l~~f~~~s~~l~~l~~--~~l~~~~l~p~gl~~Ph-h~~A~ei~yV~~G~g~~g~V~~-~~~~~~~l~~GD 94 (418)
T 3s7i_A 19 GNQNGRIRVLQRFDQRSRQFQNLQN--HRIVQIEAKPNTLVLPK-HADADNILVIQQGQATVTVANG-NNRKSFNLDEGH 94 (418)
T ss_dssp ECSSEEEEEECCHHHHCGGGGGGTT--CEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECS-SCEEEEEEETTE
T ss_pred EcCCcEEEEecccCCcchhcccccc--eEEEEEEecCCceeeee-eCCCCeEEEEEEeeEEEEEEec-CCEEEEEecCCC
Confidence 67788888874 357888885 56778899999999999 8999999999999999999987 455689999999
Q ss_pred EEEECCCCeEEEEecCCc-cEEEEEE-EcCCCCeeeec--------cchhhcCCCCCCHHHHHhhcCCCHHHHHHHH
Q 027585 150 MFVIPRGLIHFQQNVGEG-KALAFTA-FNSHLPGAVIV--------PTTLFASTPSVPNQVLTKTFQVDDDLISTIK 216 (221)
Q Consensus 150 v~~~P~g~~H~~~N~g~~-~a~~l~~-~~s~~pg~~~~--------~~~lf~~~p~~~~~vla~~f~l~~~~v~~l~ 216 (221)
+++||+|.+||++|.|+. .++++++ .++++||.+.. ..++|+. +|+|||+++|+++.+++++|+
T Consensus 95 v~~~P~G~~h~~~N~g~~~~l~i~~l~~~s~~pg~~~~f~laG~~~~~s~~~g---f~~evLa~af~v~~~~v~kl~ 168 (418)
T 3s7i_A 95 ALRIPSGFISYILNRHDNQNLRVAKISMPVNTPGQFEDFFPASSRDQSSYLQG---FSRNTLEAAFNAEFNEIRRVL 168 (418)
T ss_dssp EEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEECSSCCSSCCCGGGG---SCHHHHHHHHTSCHHHHHHHT
T ss_pred EEEECCCCeEEEEecCCCccEEEEEeecCcCCCCccceeeccCCcchhHHhhc---CCHHHHHHHHCcCHHHHHhhh
Confidence 999999999999998754 5666653 56677875433 1357775 999999999999999999997
No 25
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.85 E-value=2.8e-21 Score=179.57 Aligned_cols=137 Identities=13% Similarity=0.293 Sum_probs=117.6
Q ss_pred ccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecC-CeEE------------
Q 027585 75 TIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTN-NVFY------------ 141 (221)
Q Consensus 75 ~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~-~~~~------------ 141 (221)
...||.+..++ ...|+|+++|++++++++.||++.+||+| ++.|++||++|++.++++.++ ++.+
T Consensus 25 ~se~G~~e~~~-~~~~~L~~~gvs~~R~~i~pggl~lPh~~-~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~ 102 (496)
T 3ksc_A 25 ESEGGLIETWN-PNNKQFRCAGVALSRATLQRNALRRPYYS-NAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGR 102 (496)
T ss_dssp EETTEEEEECC-TTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECCEEEEEECTTCCCC-------------
T ss_pred CCCCcEEEecc-ccchhhccCCceEEEEEecCCCEeCceEc-CCCEEEEEEeCceEEEEEeCCCCccchhhhhccccccc
Confidence 45677666665 67899999999999999999999999999 789999999999999998764 3333
Q ss_pred --------EEEecCCcEEEECCCCeEEEEecCCccEEEEEEEcCCCCe--------eeecc-------------------
Q 027585 142 --------SKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFNSHLPG--------AVIVP------------------- 186 (221)
Q Consensus 142 --------~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg--------~~~~~------------------- 186 (221)
.+.|++||+|+||+|++||++|.|++++++++++...++. .+.++
T Consensus 103 ~~~d~~qk~~~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~n~~NQld~~~r~F~LaG~~~~~~~~~~~~~~~~~~ 182 (496)
T 3ksc_A 103 RYRDRHQKVNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLQYQHQQGGKQE 182 (496)
T ss_dssp --CCCCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTGGGCC-------
T ss_pred ccccchheeeccCCCCEEEECCCCcEEEEcCCCCCEEEEEEeccCcccccCCCceeeeEecCCCcccccccccccccccc
Confidence 4599999999999999999999999999999999766542 23332
Q ss_pred -----chhhcCCCCCCHHHHHhhcCCCHHHHHHHH
Q 027585 187 -----TTLFASTPSVPNQVLTKTFQVDDDLISTIK 216 (221)
Q Consensus 187 -----~~lf~~~p~~~~~vla~~f~l~~~~v~~l~ 216 (221)
.++|+. ++.++|+.||+++.++++||.
T Consensus 183 ~~~~~~ni~sg---F~~e~La~Af~v~~e~~~kl~ 214 (496)
T 3ksc_A 183 QENEGNNIFSG---FKRDFLEDAFNVNRHIVDRLQ 214 (496)
T ss_dssp ----CCSGGGG---SCHHHHHHHHTCCHHHHHHHT
T ss_pred ccccCCCchhh---cCHHHHHHHHCCCHHHHHHHH
Confidence 468885 999999999999999999998
No 26
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.85 E-value=1.9e-20 Score=167.01 Aligned_cols=149 Identities=17% Similarity=0.248 Sum_probs=126.6
Q ss_pred CeEEecccCCCCcccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEE
Q 027585 62 DFFFDGLSKEGNTTIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFY 141 (221)
Q Consensus 62 df~~~~l~~~~~~~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~ 141 (221)
.|.|+.-..+ +....|+.++.++..++|.+. ++++.++++.||+..++|||+++.|++||++|++++++.+.+|+..
T Consensus 20 ~~~~~~~~~~-~~~~~~G~~~~~~~~~~p~~~--~~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~ 96 (361)
T 2vqa_A 20 AFTYAFSKTP-LVLYDGGTTKQVGTYNFPVSK--GMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVE 96 (361)
T ss_dssp CSEECGGGSC-CEEETTEEEEEESTTTCTTCC--SCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEE
T ss_pred ceEEEcccCC-ceecCCceEEEeChhhCcccc--ceeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEE
Confidence 4778854333 344578999999999999887 4689999999999999999997799999999999999987666545
Q ss_pred EEEecCCcEEEECCCCeEEEEecCCccEEEEEEEcCCCCe---eeeccchhhcCCCCCCHHHHHhhcCCCHHHHHHHHh
Q 027585 142 SKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFNSHLPG---AVIVPTTLFASTPSVPNQVLTKTFQVDDDLISTIKS 217 (221)
Q Consensus 142 ~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg---~~~~~~~lf~~~p~~~~~vla~~f~l~~~~v~~l~~ 217 (221)
.+.|++||+++||+|.+|++.|.++++++++.+++..++. .+...+++ +. +|.++|+++|+++.+.++++++
T Consensus 97 ~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~~~~~~~~~~~~~~~-~~---~p~~vLa~~~~v~~~~~~~l~~ 171 (361)
T 2vqa_A 97 IADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDGTFSEGATFSVTDWL-SH---TPIAWVEENLGWTAAQVAQLPK 171 (361)
T ss_dssp EEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESSTTCCTTSSEEHHHHH-HT---SCHHHHHHHHTCCHHHHTTSCS
T ss_pred EEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCccccceecHhHHH-Hh---CCHHHHHHHhCcCHHHHHhccc
Confidence 7999999999999999999999999999999999887765 45555554 64 9999999999999999988764
No 27
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.84 E-value=1.4e-20 Score=175.34 Aligned_cols=140 Identities=19% Similarity=0.377 Sum_probs=116.3
Q ss_pred ccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe---------------
Q 027585 75 TIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV--------------- 139 (221)
Q Consensus 75 ~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~--------------- 139 (221)
...|+.+..++ ...|.|+++|+++++++++||++.+||||+. .|++||++|+++++++.++..
T Consensus 24 ~se~G~~e~~~-~~~~~l~~~gv~~~r~~i~pggl~~Ph~~~~-~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~ 101 (493)
T 2d5f_A 24 ESEGGLIETWN-SQHPELQCAGVTVSKRTLNRNGLHLPSYSPY-PQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGS 101 (493)
T ss_dssp ECSSEEEEECC-TTSHHHHHHTCEEEEEEECTTEEEEEEECSS-CEEEEEEECEEEEEECCTTCCCCEEECC--------
T ss_pred ecCCcEEEEeC-CCChhhccCCEEEEEEEeCCCcEeCceecCC-CeEEEEEeCEEEEEEEeCCCcccccccccccccccc
Confidence 45677666655 5559999999999999999999999999985 899999999999999954310
Q ss_pred ----------EEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEEcCCC--------Ceeeecc---------------
Q 027585 140 ----------FYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFNSHL--------PGAVIVP--------------- 186 (221)
Q Consensus 140 ----------~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~--------pg~~~~~--------------- 186 (221)
-..+.|++||+++||+|++||++|.|+++++++++++..+ +..+.++
T Consensus 102 ~~~~~~~d~~qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~ 181 (493)
T 2d5f_A 102 RSQQQLQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYLAGNPDIEHPETMQQQQ 181 (493)
T ss_dssp -----CSEEESCEEEEETTEEEEECTTCCEEEEECSSSCEEEEEEECTTCTTCCSCSSCCCEESSSCCCCSCGGGTC---
T ss_pred ccccccccccceEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCcCcccccccccceeeccCCccccchhhhhhcc
Confidence 1256999999999999999999999999999999987443 2334443
Q ss_pred --------------------chhhcCCCCCCHHHHHhhcCCCHHHHHHHHhhh
Q 027585 187 --------------------TTLFASTPSVPNQVLTKTFQVDDDLISTIKSKF 219 (221)
Q Consensus 187 --------------------~~lf~~~p~~~~~vla~~f~l~~~~v~~l~~~~ 219 (221)
.++|+. +++++|+++|+++.+++++|++..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~nif~g---f~~e~La~aF~v~~~~v~kl~~~~ 231 (493)
T 2d5f_A 182 QQKSHGGRKQGQHQQQEEEGGSVLSG---FSKHFLAQSFNTNEDTAEKLRSPD 231 (493)
T ss_dssp ------------------CCCCGGGG---SCHHHHHHHTTCCHHHHHHTTCTT
T ss_pred cccccccccccccccccccccchhhc---CCHHHHHhHhCCCHHHHHHhhhcc
Confidence 368875 999999999999999999998654
No 28
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.83 E-value=1.3e-20 Score=173.88 Aligned_cols=138 Identities=16% Similarity=0.253 Sum_probs=118.4
Q ss_pred ccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EE------------
Q 027585 75 TIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FY------------ 141 (221)
Q Consensus 75 ~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~------------ 141 (221)
...+|.+..++... |+|+++|+++++++++||+..+||+|+ +.|++||++|++++++..++.+ .+
T Consensus 22 ~se~G~~e~w~~~~-~~L~~~gvs~~r~~i~p~Gl~lPh~~~-a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~ 99 (466)
T 3kgl_A 22 KAEAGRIEVWDHHA-PQLRCSGVSFVRYIIESKGLYLPSFFS-TAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGS 99 (466)
T ss_dssp EETTEEEEECCTTS-HHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC--
T ss_pred eCCCcEEEEECCCC-hhhccCCeEEEEEEECCCCEeCCeeCC-CCeEEEEEeCeEEEEEecCCCcchhhccccccccccc
Confidence 57788888888766 999999999999999999999999998 7999999999999999975211 00
Q ss_pred ----------------------------------------------EEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 142 ----------------------------------------------SKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 142 ----------------------------------------------~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
.+.|++||+++||+|.+||++|.|++++++++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~ 179 (466)
T 3kgl_A 100 PFGEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVL 179 (466)
T ss_dssp ---------------------------------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEEEEEE
Confidence 2489999999999999999999999999999999
Q ss_pred cCCCC--------eeeecc------------------chhhcCCCCCCHHHHHhhcCCCHHHHHHHHh
Q 027585 176 NSHLP--------GAVIVP------------------TTLFASTPSVPNQVLTKTFQVDDDLISTIKS 217 (221)
Q Consensus 176 ~s~~p--------g~~~~~------------------~~lf~~~p~~~~~vla~~f~l~~~~v~~l~~ 217 (221)
+..+. ..+.++ .++|+. ++.++|+++|+++.++++||++
T Consensus 180 d~~n~~nQld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ni~sG---F~~e~La~Af~v~~e~~~kL~~ 244 (466)
T 3kgl_A 180 DLASHQNQLDRNPRPFYLAGNNPQGQVWIEGREQQPQKNILNG---FTPEVLAKAFKIDVRTAQQLQN 244 (466)
T ss_dssp ESSSTTCCSCSSCCEEESSCCBTTCCTTSTTCTTCCBCCGGGG---SCHHHHHHHHTSCHHHHHHHTC
T ss_pred cCCCcccccCCceeeeEecCCCccccccccccccccCCCcccc---CCHHHHHHHhCCCHHHHHHHhc
Confidence 66543 344444 267774 9999999999999999999974
No 29
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.82 E-value=1.9e-19 Score=162.09 Aligned_cols=153 Identities=20% Similarity=0.291 Sum_probs=128.9
Q ss_pred ccCCeEEecccCCCCcccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCC
Q 027585 59 TSGDFFFDGLSKEGNTTIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNN 138 (221)
Q Consensus 59 ~~~df~~~~l~~~~~~~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~ 138 (221)
....|+|+....+. ....++.++.+....++... ++.+.+++++||+..++|||+++.|++||++|++++.+++.+|
T Consensus 222 ~~~~~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~--~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g 298 (385)
T 1j58_A 222 VPYPFTYRLLEQEP-IESEGGKVYIADSTNFKVSK--TIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDG 298 (385)
T ss_dssp CSSCSEEEGGGSCC-EECSSEEEEEESTTTSTTCC--SCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETT
T ss_pred CCCCeeeecccCCC-eeCCCceEEEeecccCCccc--ceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCCC
Confidence 35678888554432 33446677777777777543 5789999999999999999998899999999999999985555
Q ss_pred eEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEEcCCCCeeeeccchhhcCCCCCCHHHHHhhcCCCHHHHHHHHhh
Q 027585 139 VFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFNSHLPGAVIVPTTLFASTPSVPNQVLTKTFQVDDDLISTIKSK 218 (221)
Q Consensus 139 ~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~lf~~~p~~~~~vla~~f~l~~~~v~~l~~~ 218 (221)
+-.++.|++||++++|+|.+|++.|.+++++++++++....+....+.+|+ +. +|+++++++|+++.+++++|++.
T Consensus 299 ~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~d~~~~~~l-~~---~~~~v~~~~f~~~~~~~~~l~~~ 374 (385)
T 1j58_A 299 HARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYADVSLNQWL-AM---LPETFVQAHLDLGKDFTDVLSKE 374 (385)
T ss_dssp EEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESSSSCCCEEHHHHH-HT---SCHHHHHHHHTCCHHHHTTCCSS
T ss_pred cEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECCCCccccCHHHHH-Hh---CCHHHHHHHhCCCHHHHHhhhcc
Confidence 444899999999999999999999999999999999998888888887776 53 99999999999999999999764
No 30
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.82 E-value=4.6e-20 Score=172.08 Aligned_cols=138 Identities=14% Similarity=0.281 Sum_probs=116.8
Q ss_pred ccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe---------------
Q 027585 75 TIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV--------------- 139 (221)
Q Consensus 75 ~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~--------------- 139 (221)
...+|.+..++. ..|+|+++|+++++++++||+..+||||+ +.|++||++|++.++++.+++.
T Consensus 27 ~se~G~~e~~~~-~~~~l~~~gvs~~r~~i~p~gl~lPh~~~-a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~ 104 (510)
T 3c3v_A 27 ESEGGYIETWNP-NNQEFECAGVALSRLVLRRNALRRPFYSN-APQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQS 104 (510)
T ss_dssp EETTEEEEECCT-TSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECCEEEEEECTTCCCCEEEECCC------
T ss_pred ccCCceEEEeCC-CCcccccCcEEEEEEEECCCCCccceecC-CCeEEEEEeCEEEEEEEeCCCcccccccccccccccc
Confidence 567777777765 44999999999999999999999999998 5999999999999999986431
Q ss_pred --------------------EEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEEcCCCC--------eeeecc-----
Q 027585 140 --------------------FYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFNSHLP--------GAVIVP----- 186 (221)
Q Consensus 140 --------------------~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~p--------g~~~~~----- 186 (221)
...+.|++||+++||+|++||++|.|+++++++++++..++ ..+.++
T Consensus 105 ~~~~~~~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n~~nqld~~~r~F~LaG~~~~ 184 (510)
T 3c3v_A 105 QRPPRRLQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNNNDNQLDQFPRRFNLAGNHEQ 184 (510)
T ss_dssp --------------CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTBTTCCSCSCCCCEESSCCCCC
T ss_pred ccccccccccccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCCcccccccccceeEecCCccc
Confidence 01378999999999999999999999999999999977653 233332
Q ss_pred -------------------------------------------------------chhhcCCCCCCHHHHHhhcCCC-HH
Q 027585 187 -------------------------------------------------------TTLFASTPSVPNQVLTKTFQVD-DD 210 (221)
Q Consensus 187 -------------------------------------------------------~~lf~~~p~~~~~vla~~f~l~-~~ 210 (221)
.++|+. ++.++|+++|+++ .+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~sg---F~~~~La~af~v~~~~ 261 (510)
T 3c3v_A 185 EFLRYQQQSRQSRRRSLPYSPYSPQSQPRQEEREFSPRGQHSRRERAGQEEEHEGGNIFSG---FTPEFLAQAFQVDDRQ 261 (510)
T ss_dssp TTGGGCC------------------------------------------------CCTGGG---SCHHHHHHHHTCCCHH
T ss_pred ccchhhhccccccccccccccccccccccccccccccccccccccccccccccccccceec---CCHHHHHHHhCCCHHH
Confidence 247774 9999999999999 99
Q ss_pred HHHHHHh
Q 027585 211 LISTIKS 217 (221)
Q Consensus 211 ~v~~l~~ 217 (221)
++++|++
T Consensus 262 ~~~~l~~ 268 (510)
T 3c3v_A 262 IVQNLRG 268 (510)
T ss_dssp HHHHHTT
T ss_pred HHHHhhc
Confidence 9999975
No 31
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.80 E-value=1.4e-19 Score=168.50 Aligned_cols=142 Identities=16% Similarity=0.332 Sum_probs=118.9
Q ss_pred CCCc-ccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecC-Ce---------
Q 027585 71 EGNT-TIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTN-NV--------- 139 (221)
Q Consensus 71 ~~~~-~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~-~~--------- 139 (221)
|.+. ...||.+..++ .++|+|+++|++++|+++.|+|+++||+|+ +.|++||++|++.++++.+. .+
T Consensus 22 P~~~i~se~G~~e~w~-~~~p~l~~~Gvs~~R~~i~p~Gl~lPh~~~-a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~ 99 (531)
T 3fz3_A 22 PDNRIQAEAGQIETWN-FNQGDFQCAGVAASRITIQRNGLHLPSYSN-APQLIYIVQGRGVLGAVFSGCPETFEESQQSS 99 (531)
T ss_dssp CCEEEEETTEEEEECC-TTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEECCCC--
T ss_pred CchhcccCCceEEEeC-CCChhhccCcceEEEEEecCCCEeCCccCC-CCeEEEEEECcEEEEEEcCCCccccccccccc
Confidence 3344 67888888887 568999999999999999999999999998 79999999999999998652 00
Q ss_pred -----------------------------------------------------------------------EEEEEecCC
Q 027585 140 -----------------------------------------------------------------------FYSKVLSAG 148 (221)
Q Consensus 140 -----------------------------------------------------------------------~~~~~L~~G 148 (221)
...+.+++|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~vr~G 179 (531)
T 3fz3_A 100 QQGRQQEQEQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKTRRIREG 179 (531)
T ss_dssp -----------------------------------------------------------------CCSCEESCCEEEETT
T ss_pred cccccccccccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceeeecccCC
Confidence 114678999
Q ss_pred cEEEECCCCeEEEEecCCccEEEEEEEcCCC--------Ceeeecc----------------------------------
Q 027585 149 EMFVIPRGLIHFQQNVGEGKALAFTAFNSHL--------PGAVIVP---------------------------------- 186 (221)
Q Consensus 149 Dv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~--------pg~~~~~---------------------------------- 186 (221)
|++.+|+|+.||++|.|+++++++++++..| |..+.++
T Consensus 180 DviaiPaG~~~w~yN~G~~~l~iv~~~Dt~n~~NQld~~~r~F~LAGn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (531)
T 3fz3_A 180 DVVAIPAGVAYWSYNDGDQELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPRQQGEQGRPGQHQQPFGRP 259 (531)
T ss_dssp EEEEECTTCCEEEECCSSSCEEEEEEEETTCTTCCSCSSCCEEESSSCCCCTTCC-------------------------
T ss_pred cEEEECCCCeEEEEeCCCceEEEEEEEccccccccCCCccceeEEcCCCccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999995533 2223332
Q ss_pred ---------chhhcCCCCCCHHHHHhhcCCCHHHHHHHHh
Q 027585 187 ---------TTLFASTPSVPNQVLTKTFQVDDDLISTIKS 217 (221)
Q Consensus 187 ---------~~lf~~~p~~~~~vla~~f~l~~~~v~~l~~ 217 (221)
.++|+. ++.++|++||++|.++++||++
T Consensus 260 ~~~~~~~~~~nifsG---Fs~e~La~A~~v~~~~a~kLq~ 296 (531)
T 3fz3_A 260 RQQEQQGNGNNVFSG---FNTQLLAQALNVNEETARNLQG 296 (531)
T ss_dssp -------CCSSGGGG---SCHHHHHHHHTSCHHHHHHHHT
T ss_pred chhhhcccCCCeeec---CCHHHHHHHHCCCHHHHHHHhc
Confidence 368885 9999999999999999999985
No 32
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.78 E-value=5.3e-19 Score=159.10 Aligned_cols=147 Identities=18% Similarity=0.269 Sum_probs=123.5
Q ss_pred CeEEecccCCCCcccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEE
Q 027585 62 DFFFDGLSKEGNTTIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFY 141 (221)
Q Consensus 62 df~~~~l~~~~~~~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~ 141 (221)
.++|+.-..+. ....|+.++.++...+|.++ ++++.++++.||+..++|||+ +.|++||++|++++++++++|+.+
T Consensus 47 ~~~~~~~~~~~-~~~~~G~~~~~~~~~lp~~~--~~~~~~~~l~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~g~~~ 122 (385)
T 1j58_A 47 NMKFSFSDTHN-RLEKGGYAREVTVRELPISE--NLASVNMRLKPGAIRELHWHK-EAEWAYMIYGSARVTIVDEKGRSF 122 (385)
T ss_dssp CCEECGGGSCC-EEETTEEEEEECTTTCTTCS--SCEEEEEEECTTCEEEEEEES-SCEEEEEEEEEEEEEEECTTSCEE
T ss_pred ceEEEcccCCc-cccCCcEEEEeccccCcccC--ceEEEEEEECCCCCCCCccCC-hheEEEEEeeeEEEEEEeCCCcEE
Confidence 47787544332 44578899999999999988 688999999999999999999 599999999999999998778766
Q ss_pred EEEecCCcEEEECCCCeEEEEecCCccEEEEEEEcCCCCee---eeccchhhcCCCCCCHHHHHhhcCCCHHHHHHHHh
Q 027585 142 SKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFNSHLPGA---VIVPTTLFASTPSVPNQVLTKTFQVDDDLISTIKS 217 (221)
Q Consensus 142 ~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~---~~~~~~lf~~~p~~~~~vla~~f~l~~~~v~~l~~ 217 (221)
.+.|++||+++||+|.+|++.|.+ ++++++.+++...+.. +.+. ++|+. +|.++|+++|+++.++++++++
T Consensus 123 ~~~l~~GD~~~ip~g~~H~~~n~~-~~~~~~~v~~~~~~~~~~~~~~~-~~~~~---~p~evla~~~~vs~~~~~~l~~ 196 (385)
T 1j58_A 123 IDDVGEGDLWYFPSGLPHSIQALE-EGAEFLLVFDDGSFSENSTFQLT-DWLAH---TPKEVIAANFGVTKEEISNLPG 196 (385)
T ss_dssp EEEEETTEEEEECTTCCEEEEEEE-EEEEEEEEESCTTCCGGGEEEHH-HHHHT---SCHHHHHHHHTCCTGGGTTSCS
T ss_pred EEEeCCCCEEEECCCCeEEEEECC-CCEEEEEEECCCCccccchhhhh-hhhhc---ccHHHHHHHhCCCHHHHHhccc
Confidence 779999999999999999999987 4689999998877653 2343 45564 9999999999999988887754
No 33
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=99.64 E-value=1.9e-16 Score=113.13 Aligned_cols=73 Identities=19% Similarity=0.231 Sum_probs=63.4
Q ss_pred EecccCCCCc-ccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCC
Q 027585 65 FDGLSKEGNT-TIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNN 138 (221)
Q Consensus 65 ~~~l~~~~~~-~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~ 138 (221)
|+.+.+.+.+ +..| +++.+++.++|+|+++|++++++++.||++.+||||++|.|++||++|++++++++.+|
T Consensus 4 fnl~~~~p~~~n~~G-~~~~~~~~~~P~Ln~lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V~~~g 77 (79)
T 1dgw_X 4 FNLRSRDPIYSNNYG-KLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQ 77 (79)
T ss_dssp EETTSSCCSEECSSE-EEEEECTTTCHHHHTTTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEEEEC-
T ss_pred cccccCCCCccCCCC-cEEEEChhhCcccCcCCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEecCCC
Confidence 5555555555 5555 45999999999999999999999999999999999999999999999999999998754
No 34
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.63 E-value=1.5e-15 Score=115.31 Aligned_cols=83 Identities=19% Similarity=0.195 Sum_probs=74.7
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEE-EecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGF-FTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTA 174 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~-~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 174 (221)
++.+.++.++||+..++|||+...|++||++|++++.+ +++ .+.|++||++++|+|.+|++.|.++++++++++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~~~-----~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v 112 (125)
T 3h8u_A 38 DSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQGNGI-----VTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSV 112 (125)
T ss_dssp SCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECSTTC-----EEEEETTEEEEECTTCCCEEEECSSSCEEEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEECCCe-----EEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEE
Confidence 46788999999999999999977999999999999998 666 899999999999999999999999999999999
Q ss_pred EcCCCCeee
Q 027585 175 FNSHLPGAV 183 (221)
Q Consensus 175 ~~s~~pg~~ 183 (221)
+....+++.
T Consensus 113 ~~p~~~~~~ 121 (125)
T 3h8u_A 113 VAPGNAGFA 121 (125)
T ss_dssp EESTTCCCC
T ss_pred ECCCcccch
Confidence 987776654
No 35
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.59 E-value=1.1e-14 Score=115.82 Aligned_cols=86 Identities=17% Similarity=0.197 Sum_probs=77.2
Q ss_pred ceEEEEEEEcCCC-cCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCC-CeEEEEecCCccEEEEE
Q 027585 96 GISMNRVDFAPGG-LNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRG-LIHFQQNVGEGKALAFT 173 (221)
Q Consensus 96 gis~~~v~l~Pgg-~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g-~~H~~~N~g~~~a~~l~ 173 (221)
++.+.+++++||+ ..++|||+...|++||++|++++.++++ ++.|++||++++|+| ..|++.|.+++++++++
T Consensus 45 ~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~~~-----~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~ 119 (162)
T 3l2h_A 45 HMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTMEND-----QYPIAPGDFVGFPCHAAAHSISNDGTETLVCLV 119 (162)
T ss_dssp SEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTSCCEEEECCSSSCEEEEE
T ss_pred eEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEECCE-----EEEeCCCCEEEECCCCceEEeEeCCCCCEEEEE
Confidence 5789999999999 5899999666999999999999999887 899999999999998 99999999999999999
Q ss_pred EEcCCCCeeeecc
Q 027585 174 AFNSHLPGAVIVP 186 (221)
Q Consensus 174 ~~~s~~pg~~~~~ 186 (221)
+.....+....++
T Consensus 120 v~~p~~~~~~~~p 132 (162)
T 3l2h_A 120 IGQRLDQDVVDYP 132 (162)
T ss_dssp EEECCSEEEEEET
T ss_pred EECCCCCCeEecC
Confidence 9987766555554
No 36
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.57 E-value=2.4e-14 Score=114.07 Aligned_cols=114 Identities=18% Similarity=0.123 Sum_probs=88.3
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecC----CeEEEEEecCCcEEEECCCCeEEEEecC-CccEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTN----NVFYSKVLSAGEMFVIPRGLIHFQQNVG-EGKAL 170 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~----~~~~~~~L~~GDv~~~P~g~~H~~~N~g-~~~a~ 170 (221)
++.+.++.++||+..++|+|+. .|++||++|++++.+++.+ ++...+.|++||++++|+|..|++.|.+ +++++
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~~-~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~ 118 (163)
T 1lr5_A 40 EVEVWLQTISPGQRTPIHRHSC-EEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQ 118 (163)
T ss_dssp SEEEEEEEECTTCBCCEEEESS-CEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEE
T ss_pred cEEEEEEEECCCCcCCCeECCC-CeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEE
Confidence 4788899999999999999986 8999999999999998821 1223899999999999999999999999 89999
Q ss_pred EEEEEcCCCCeeeeccchhhcCCCCCCHHHHHhhcCCCHHHHHH
Q 027585 171 AFTAFNSHLPGAVIVPTTLFASTPSVPNQVLTKTFQVDDDLIST 214 (221)
Q Consensus 171 ~l~~~~s~~pg~~~~~~~lf~~~p~~~~~vla~~f~l~~~~v~~ 214 (221)
+++++...........+|+ . ++....+...+.++.+.+++
T Consensus 119 ~l~i~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~ 158 (163)
T 1lr5_A 119 VLVIISRPPAKIFLYDDWS-M---PHTAAVLKFPFVWDEDCFEA 158 (163)
T ss_dssp EEEEEESSSCCEEEESSTT-S---CGGGCEEESSCTTTHHHHHH
T ss_pred EEEEECCCCcccccccccc-c---CCcCccceeccccccccccc
Confidence 9999876554444444443 2 14444444455666666664
No 37
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.57 E-value=7.8e-15 Score=107.29 Aligned_cols=75 Identities=20% Similarity=0.235 Sum_probs=68.9
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEe--cCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFT--TNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFT 173 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~--~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 173 (221)
.+.+.+++++||+..++|.|+...|++||++|++++.+++ + .+.|++||++++|+|..|++.|.|+++++++.
T Consensus 17 ~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~g~~-----~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~ 91 (97)
T 2fqp_A 17 RVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPEGSV-----TSQLTRGVSYTRPEGVEHNVINPSDTEFVFVE 91 (97)
T ss_dssp SEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEETTEEE-----EEEECTTCCEEECTTCEEEEECCSSSCEEEEE
T ss_pred eEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeCCCCE-----EEEEcCCCEEEeCCCCcccCEeCCCCcEEEEE
Confidence 5789999999999999999998557999999999999876 4 89999999999999999999999999999887
Q ss_pred EE
Q 027585 174 AF 175 (221)
Q Consensus 174 ~~ 175 (221)
+-
T Consensus 92 v~ 93 (97)
T 2fqp_A 92 IE 93 (97)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 38
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.56 E-value=2.1e-14 Score=104.16 Aligned_cols=78 Identities=18% Similarity=0.220 Sum_probs=71.6
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEE
Q 027585 95 LGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTA 174 (221)
Q Consensus 95 ~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 174 (221)
.++.+.++.++||...++|+|++..|++||++|++++.++++ .+.+++||++++|+|..|.+.|.++++++++.+
T Consensus 26 ~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~v 100 (105)
T 1v70_A 26 ERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVGEE-----EALLAPGMAAFAPAGAPHGVRNESASPALLLVV 100 (105)
T ss_dssp TTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTSCEEEECCSSSCEEEEEE
T ss_pred CceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 357889999999999999999976899999999999999876 899999999999999999999999999999988
Q ss_pred EcC
Q 027585 175 FNS 177 (221)
Q Consensus 175 ~~s 177 (221)
+..
T Consensus 101 ~~p 103 (105)
T 1v70_A 101 TAP 103 (105)
T ss_dssp EES
T ss_pred eCC
Confidence 764
No 39
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.55 E-value=1.2e-13 Score=111.30 Aligned_cols=117 Identities=15% Similarity=0.185 Sum_probs=89.9
Q ss_pred CcccccCCeEEecccCCCC----cccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEE
Q 027585 55 AAEVTSGDFFFDGLSKEGN----TTIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLL 130 (221)
Q Consensus 55 p~~~~~~df~~~~l~~~~~----~~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~ 130 (221)
++-+..+++.+..+..... ....|...+.+..... +....++.+.+++++||+..++|||+. .|++||++|+++
T Consensus 11 ~~iv~~~~~~W~~~~~~~~~~~~~~~~g~~~~~L~~~~~-g~~~~~~~~~~~~l~pG~~~~~H~H~~-~E~~~Vl~G~~~ 88 (167)
T 3ibm_A 11 SRVLRERDYRWEGTEEEAYKAEGTHFSGARRQTLVGRPA-GQEAPAFETRYFEVEPGGYTTLERHEH-THVVMVVRGHAE 88 (167)
T ss_dssp CEEECEETTEETTCCCC---------CCEEEEEEECTTT-TCCSSSEEEEEEEECTTCBCCCBBCSS-CEEEEEEESEEE
T ss_pred CceeecCCcccccceeeeccCCCCcCCCcEEEEEECCCC-CCCCCcEEEEEEEECCCCCCCCccCCC-cEEEEEEeCEEE
Confidence 3456677777776543111 1224555554443332 222346889999999999999999985 999999999999
Q ss_pred EEEEecCCeEEEEEecCCcEEEECCCCeEEEEecC-CccEEEEEEEcCC
Q 027585 131 VGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVG-EGKALAFTAFNSH 178 (221)
Q Consensus 131 v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g-~~~a~~l~~~~s~ 178 (221)
+.++++ .+.|++||++++|+|.+|.+.|.+ ++++++++++...
T Consensus 89 ~~i~~~-----~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 89 VVLDDR-----VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp EEETTE-----EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred EEECCE-----EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 999887 999999999999999999999999 9999999998755
No 40
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.54 E-value=2.3e-14 Score=116.40 Aligned_cols=80 Identities=20% Similarity=0.298 Sum_probs=74.4
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEE-ecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEE
Q 027585 95 LGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFF-TTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFT 173 (221)
Q Consensus 95 ~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~-~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 173 (221)
.|..+.+++++||+..++|.|+. .|++||++|++++.++ ++ ++.|++||++ ||+|..|+++|.|++++++++
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H~~-eE~~~VLeGel~l~ld~ge-----~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~ 149 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRTNS-IDYGIVLEGEIELELDDGA-----KRTVRQGGII-VQRGTNHLWRNTTDKPCRIAF 149 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCCSE-EEEEEEEESCEEEECGGGC-----EEEECTTCEE-EECSCCBEEECCSSSCEEEEE
T ss_pred CCeEEEEEEECCCCCCCCeecCc-eEEEEEEeCEEEEEECCCe-----EEEECCCCEE-EeCCCcEEEEeCCCCCEEEEE
Confidence 47889999999999999999986 8999999999999998 55 8999999999 999999999999999999999
Q ss_pred EEcCCCCe
Q 027585 174 AFNSHLPG 181 (221)
Q Consensus 174 ~~~s~~pg 181 (221)
++....|-
T Consensus 150 V~~P~~p~ 157 (172)
T 3es1_A 150 ILIEAPAY 157 (172)
T ss_dssp EEEECCCC
T ss_pred EEcCCCce
Confidence 99988774
No 41
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.54 E-value=7.1e-14 Score=112.01 Aligned_cols=86 Identities=19% Similarity=0.160 Sum_probs=77.3
Q ss_pred ceEEEEEEEcCCCcC-CCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCC--CeEEEEecCCccEEEE
Q 027585 96 GISMNRVDFAPGGLN-PPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRG--LIHFQQNVGEGKALAF 172 (221)
Q Consensus 96 gis~~~v~l~Pgg~~-~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g--~~H~~~N~g~~~a~~l 172 (221)
.+.+.+++++||+.. ++|||+..+|++||++|++++.++++ ++.|++||++++|+| ..|.+.|.++++++++
T Consensus 42 ~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~~~-----~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~l 116 (163)
T 3i7d_A 42 QFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDDQG-----EHPMVPGDCAAFPAGDPNGHQFVNRTDAPATFL 116 (163)
T ss_dssp SEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTCCCCBEEECCSSSCEEEE
T ss_pred eEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEECCE-----EEEeCCCCEEEECCCCCcceEEEECCCCCEEEE
Confidence 588999999999965 89999986799999999999999887 899999999999999 9999999999999999
Q ss_pred EEEcCCCCeeeecc
Q 027585 173 TAFNSHLPGAVIVP 186 (221)
Q Consensus 173 ~~~~s~~pg~~~~~ 186 (221)
++..........+.
T Consensus 117 ~v~~p~~~d~~~yp 130 (163)
T 3i7d_A 117 VVGTRTPTETAYYS 130 (163)
T ss_dssp EEEECCSCEEEEET
T ss_pred EEECCCCCCcccCC
Confidence 99987766555444
No 42
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.53 E-value=9.5e-14 Score=109.07 Aligned_cols=84 Identities=15% Similarity=0.182 Sum_probs=72.8
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEEEECCCCeEEEEecCCccEEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTA 174 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 174 (221)
++.+.++.++||...++|+|+...|++||++|++++.+++..+. .+++.|++||++++|+|.+|.+.|.++++++++++
T Consensus 42 ~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~i 121 (148)
T 2oa2_A 42 HLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYSI 121 (148)
T ss_dssp SCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred ceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEEE
Confidence 46788999999999999999976799999999999999887211 12399999999999999999999999999999988
Q ss_pred EcCCC
Q 027585 175 FNSHL 179 (221)
Q Consensus 175 ~~s~~ 179 (221)
+....
T Consensus 122 ~~~~~ 126 (148)
T 2oa2_A 122 YAPPQ 126 (148)
T ss_dssp EESCC
T ss_pred ECCCC
Confidence 76543
No 43
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.53 E-value=2.1e-14 Score=122.34 Aligned_cols=82 Identities=18% Similarity=0.182 Sum_probs=72.3
Q ss_pred ccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEE--------Eec-------CCeEEEEEecCCcEEEECCCCe
Q 027585 94 TLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGF--------FTT-------NNVFYSKVLSAGEMFVIPRGLI 158 (221)
Q Consensus 94 ~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~--------~~~-------~~~~~~~~L~~GDv~~~P~g~~ 158 (221)
+.++++.+++++||+..++|+|++..|++||++|++++.+ +++ +++.+.+.+++||++++|+|.+
T Consensus 40 ~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~ 119 (239)
T 2xlg_A 40 DIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYM 119 (239)
T ss_dssp TEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEE
T ss_pred CCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCC
Confidence 3457899999999999999999988999999999999998 443 2355689999999999999999
Q ss_pred EEEEecCCccEEE-EEEE
Q 027585 159 HFQQNVGEGKALA-FTAF 175 (221)
Q Consensus 159 H~~~N~g~~~a~~-l~~~ 175 (221)
|.++|.+++++++ +.++
T Consensus 120 H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 120 HGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp EEEECCSSSCEEEEEEEE
T ss_pred EEEEeCCCCCEEEEEEEE
Confidence 9999999999998 6666
No 44
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.51 E-value=9.2e-14 Score=107.41 Aligned_cols=82 Identities=20% Similarity=0.244 Sum_probs=74.4
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEE--EEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVG--FFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFT 173 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~--~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 173 (221)
.+.+.+++++||+..++|+|+. .|++||++|++++. ++++ .+.+++||++++|+|..|.+.|.++++++++.
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~ 111 (145)
T 3ht1_A 38 RFVLTEFEVSPNGSTPPHFHEW-EHEIYVLEGSMGLVLPDQGR-----TEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLV 111 (145)
T ss_dssp SEEEEEEEEEEEEECCCEECSS-CEEEEEEEECEEEEEGGGTE-----EEEECTTCEEEECTTCCBEEECCTTCCEEEEE
T ss_pred cEEEEEEEECCCCcCCCccCCC-ceEEEEEEeEEEEEEeECCE-----EEEECCCCEEEECCCCeEEeEcCCCCCEEEEE
Confidence 5789999999999999999997 88899999999999 7766 89999999999999999999999999999999
Q ss_pred EEcCCCCeee
Q 027585 174 AFNSHLPGAV 183 (221)
Q Consensus 174 ~~~s~~pg~~ 183 (221)
++....+...
T Consensus 112 i~~~~~~~~~ 121 (145)
T 3ht1_A 112 VAPCERPPVR 121 (145)
T ss_dssp EEESCCCCCE
T ss_pred EECCCCCCee
Confidence 9987766543
No 45
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.51 E-value=1.2e-13 Score=101.89 Aligned_cols=79 Identities=20% Similarity=0.234 Sum_probs=71.7
Q ss_pred cceEEEEEEEcCCCcCCCC--CCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEE
Q 027585 95 LGISMNRVDFAPGGLNPPH--SHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAF 172 (221)
Q Consensus 95 ~gis~~~v~l~Pgg~~~~H--~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l 172 (221)
.++.+.++.+.||...++| +|++..|++||++|++++.++++ .+.|++||++++|+|..|.+.|.++++++++
T Consensus 19 ~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~~~~-----~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~ 93 (113)
T 2gu9_A 19 RQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVDGH-----TQALQAGSLIAIERGQAHEIRNTGDTPLKTV 93 (113)
T ss_dssp TTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEETTE-----EEEECTTEEEEECTTCCEEEECCSSSCEEEE
T ss_pred CcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEcCCCCCEEEE
Confidence 3578899999999998888 99856999999999999999876 8999999999999999999999999999999
Q ss_pred EEEcCC
Q 027585 173 TAFNSH 178 (221)
Q Consensus 173 ~~~~s~ 178 (221)
.++...
T Consensus 94 ~v~~~~ 99 (113)
T 2gu9_A 94 NFYHPP 99 (113)
T ss_dssp EEEESC
T ss_pred EEECCC
Confidence 887653
No 46
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.48 E-value=2.8e-13 Score=110.60 Aligned_cols=81 Identities=15% Similarity=0.155 Sum_probs=70.0
Q ss_pred cccceEEEEEEEcCCCcCC---CCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEec-CCcc
Q 027585 93 NTLGISMNRVDFAPGGLNP---PHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNV-GEGK 168 (221)
Q Consensus 93 ~~~gis~~~v~l~Pgg~~~---~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~-g~~~ 168 (221)
.+..+.+.+++++||+..+ +|+|++ .|++||++|++++.+++. +....+.|++||+++||++.+|.+.|. ++++
T Consensus 113 ~~~~~~~~~~~~~pg~~~~~~~~h~h~~-~E~~~Vl~G~~~~~~~~~-~~~~~~~l~~GD~~~~~~~~~H~~~n~~~~~~ 190 (198)
T 2bnm_A 113 RAPSLVPLVVDVLTDNPDDAKFNSGHAG-NEFLFVLEGEIHMKWGDK-ENPKEALLPTGASMFVEEHVPHAFTAAKGTGS 190 (198)
T ss_dssp TSTTCEEEEEEECCCCGGGCCCCCCCSS-CEEEEEEESCEEEEESCT-TSCEEEEECTTCEEEECTTCCEEEEESTTSCC
T ss_pred CCCcceEEEEEEcCCCCCcccccccCCC-eEEEEEEeeeEEEEECCc-CCcccEEECCCCEEEeCCCCceEEEecCCCCC
Confidence 3446889999999999765 799987 999999999999999881 111189999999999999999999999 9999
Q ss_pred EEEEEEE
Q 027585 169 ALAFTAF 175 (221)
Q Consensus 169 a~~l~~~ 175 (221)
+++++++
T Consensus 191 ~~~l~v~ 197 (198)
T 2bnm_A 191 AKLIAVN 197 (198)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 9999875
No 47
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.48 E-value=7.6e-14 Score=105.81 Aligned_cols=78 Identities=24% Similarity=0.500 Sum_probs=71.2
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
++.+.++.++||+..++|+|+. .|++||++|++++.++++ .+.|++||++++|+|..|.+.|.++ +++++.++
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l~v~ 112 (126)
T 4e2g_A 40 NLMLNWVRIEPNTEMPAHEHPH-EQAGVMLEGTLELTIGEE-----TRVLRPGMAYTIPGGVRHRARTFED-GCLVLDIF 112 (126)
T ss_dssp SCEEEEEEECTTCEEEEECCSS-EEEEEEEEECEEEEETTE-----EEEECTTEEEEECTTCCEEEECCTT-CEEEEEEE
T ss_pred CeEEEEEEECCCCcCCCccCCC-ceEEEEEEeEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEECCC-CEEEEEEE
Confidence 5789999999999999999997 999999999999999877 8999999999999999999999987 89999888
Q ss_pred cCCCC
Q 027585 176 NSHLP 180 (221)
Q Consensus 176 ~s~~p 180 (221)
.....
T Consensus 113 ~p~~~ 117 (126)
T 4e2g_A 113 SPPRE 117 (126)
T ss_dssp ESCCH
T ss_pred CCCCc
Confidence 75443
No 48
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.48 E-value=5.1e-13 Score=109.68 Aligned_cols=83 Identities=17% Similarity=0.230 Sum_probs=75.0
Q ss_pred ceEEEEEEEcCCCc------CCCCCCC--CCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCc
Q 027585 96 GISMNRVDFAPGGL------NPPHSHP--RASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEG 167 (221)
Q Consensus 96 gis~~~v~l~Pgg~------~~~H~Hp--~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~ 167 (221)
.+.+..++++||+. .++|+|+ +..|++||++|++++.++++.|+...+.|++||++++|+|..|++.|.|++
T Consensus 66 ~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~~ 145 (190)
T 1x82_A 66 DLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGDE 145 (190)
T ss_dssp CEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEECSSS
T ss_pred CeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeEEEEECCcc
Confidence 57888889999998 7899998 447999999999999999886777779999999999999999999999999
Q ss_pred cEEEEEEEcCC
Q 027585 168 KALAFTAFNSH 178 (221)
Q Consensus 168 ~a~~l~~~~s~ 178 (221)
++++++++...
T Consensus 146 ~~~~l~v~~~~ 156 (190)
T 1x82_A 146 PFIFLAIYPAD 156 (190)
T ss_dssp CEEEEEEEETT
T ss_pred cEEEEEEECCC
Confidence 99999988754
No 49
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.48 E-value=1.2e-13 Score=104.23 Aligned_cols=73 Identities=15% Similarity=0.232 Sum_probs=64.9
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTA 174 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 174 (221)
++.+.++.++||...++|||+. .|++||++|++++.++++ ++.|++||++++|+|.+|.+.|.++....++.+
T Consensus 35 ~~~v~~~~l~~G~~~~~H~H~~-~e~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~~v 107 (114)
T 3fjs_A 35 RLEVMRMVLPAGKQVGSHSVAG-PSTIQCLEGEVEIGVDGA-----QRRLHQGDLLYLGAGAAHDVNAITNTSLLVTVV 107 (114)
T ss_dssp TEEEEEEEECTTCEEEEECCSS-CEEEEEEESCEEEEETTE-----EEEECTTEEEEECTTCCEEEEESSSEEEEEEEE
T ss_pred CEEEEEEEECCCCccCceeCCC-cEEEEEEECEEEEEECCE-----EEEECCCCEEEECCCCcEEEEeCCCcEEEEEEE
Confidence 5789999999999999999997 899999999999999887 899999999999999999999986655444333
No 50
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.47 E-value=1.8e-13 Score=109.27 Aligned_cols=79 Identities=14% Similarity=0.108 Sum_probs=73.3
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEE
Q 027585 95 LGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTA 174 (221)
Q Consensus 95 ~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 174 (221)
.++.+..++++||+..++|+|+. .|++||++|++++.++++ .+.|++||++++|+|..|.+.|.++++++++++
T Consensus 42 ~~~~~~~~~l~pG~~~~~H~H~~-~E~~~Vl~G~~~v~v~g~-----~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i 115 (156)
T 3kgz_A 42 LACEWRYFEVDEGGYSTLERHAH-VHAVMIHRGHGQCLVGET-----ISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCV 115 (156)
T ss_dssp CSEEEEEEEEEEEEECCCBBCSS-CEEEEEEEEEEEEEETTE-----EEEEETTCEEEECTTCCEEEECCSSSCEEEEEE
T ss_pred CcEEEEEEEECCCCccCceeCCC-cEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 46888999999999999999997 899999999999999887 999999999999999999999999999999999
Q ss_pred EcCCC
Q 027585 175 FNSHL 179 (221)
Q Consensus 175 ~~s~~ 179 (221)
++...
T Consensus 116 ~~~~~ 120 (156)
T 3kgz_A 116 VNAAR 120 (156)
T ss_dssp EESSC
T ss_pred EeCCC
Confidence 87554
No 51
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.46 E-value=2.7e-13 Score=104.71 Aligned_cols=77 Identities=17% Similarity=0.172 Sum_probs=70.2
Q ss_pred ccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEE
Q 027585 94 TLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFT 173 (221)
Q Consensus 94 ~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 173 (221)
+..+.+.+++++||+..++|+|++..|++||++|++++.++++ .+.|++||++++|+|.+|++.|.+++++++++
T Consensus 54 ~~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~ 128 (133)
T 1o4t_A 54 NKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDNGK-----DVPIKAGDVCFTDSGESHSIENTGNTDLEFLA 128 (133)
T ss_dssp TSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEETTE-----EEEEETTEEEEECTTCEEEEECCSSSCEEEEE
T ss_pred CceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEECCE-----EEEeCCCcEEEECCCCcEEeEECCCCCEEEEE
Confidence 3346788999999999999999866999999999999999877 89999999999999999999999999999988
Q ss_pred EE
Q 027585 174 AF 175 (221)
Q Consensus 174 ~~ 175 (221)
+.
T Consensus 129 v~ 130 (133)
T 1o4t_A 129 VI 130 (133)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 52
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.46 E-value=3.8e-13 Score=100.94 Aligned_cols=75 Identities=17% Similarity=0.244 Sum_probs=68.3
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEE-EecCCcEEEECCCCeEEEEecCCccEEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSK-VLSAGEMFVIPRGLIHFQQNVGEGKALAFTA 174 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~-~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 174 (221)
++.+.++.+.||+..++|+|+. .|++||++|++++.++++ .+ .|++||++++|+|.+|.+.|.++++++++.+
T Consensus 26 ~~~~~~~~~~pg~~~~~H~H~~-~e~~~Vl~G~~~~~i~~~-----~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i 99 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPKHYSNS-YVHLIIIKGEMTLTLEDQ-----EPHNYKEGNIVYVPFNVKMLIQNINSDILEFFVV 99 (117)
T ss_dssp SCEEEEEEEETTCBCCCEECSS-CEEEEEEESEEEEEETTS-----CCEEEETTCEEEECTTCEEEEECCSSSEEEEEEE
T ss_pred ceEEEEEEECCCCcCCCEeCCC-cEEEEEEeCEEEEEECCE-----EEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEE
Confidence 4678889999999999999986 999999999999999876 77 9999999999999999999999999998887
Q ss_pred Ec
Q 027585 175 FN 176 (221)
Q Consensus 175 ~~ 176 (221)
..
T Consensus 100 ~~ 101 (117)
T 2b8m_A 100 KA 101 (117)
T ss_dssp EC
T ss_pred EC
Confidence 54
No 53
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.45 E-value=3.4e-14 Score=104.98 Aligned_cols=78 Identities=13% Similarity=0.129 Sum_probs=68.2
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
.+.+.+++++||+..++|+|+...|+++|++|++++...+ ++.....+++||++++|+|..|++.|.|+++++++.+-
T Consensus 16 ~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d--~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~IeVE 93 (98)
T 3lag_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPD--GTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEIE 93 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTT--SCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEEEE
T ss_pred eEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEeCC--CceEEEEecCCcEEEEcCCCcEECEECCCCeEEEEEEE
Confidence 4789999999999999999998789999999999987654 33336779999999999999999999999999999873
No 54
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.45 E-value=2.9e-13 Score=109.18 Aligned_cols=78 Identities=14% Similarity=0.172 Sum_probs=72.6
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEE
Q 027585 95 LGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTA 174 (221)
Q Consensus 95 ~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 174 (221)
.++.+..++++||+..++|||+. .|++||++|++++.++++ .+.|++||++++|+|..|.+.|.++++++++++
T Consensus 51 ~~~~~~~~~l~pG~~~~~H~H~~-~E~~~Vl~G~~~~~v~g~-----~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i 124 (166)
T 3jzv_A 51 LTGELRYFEVGPGGHSTLERHQH-AHGVMILKGRGHAMVGRA-----VSAVAPYDLVTIPGWSWHQFRAPADEALGFLCM 124 (166)
T ss_dssp CSEEEEEEEEEEEEECCCBBCSS-CEEEEEEEECEEEEETTE-----EEEECTTCEEEECTTCCEEEECCTTSCEEEEEE
T ss_pred CeEEEEEEEECCCCccCceeCCC-cEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 46888999999999999999997 899999999999999877 999999999999999999999999999999998
Q ss_pred EcCC
Q 027585 175 FNSH 178 (221)
Q Consensus 175 ~~s~ 178 (221)
+...
T Consensus 125 ~~~~ 128 (166)
T 3jzv_A 125 VNAE 128 (166)
T ss_dssp EESS
T ss_pred EccC
Confidence 8754
No 55
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.44 E-value=3.6e-13 Score=100.50 Aligned_cols=77 Identities=22% Similarity=0.302 Sum_probs=68.9
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
++.+.+++++||...++|+|+. .|++||++|++++.++++ .+.|++||++++|+|..|.+.|.+ +++++.++
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~v~ 104 (116)
T 2pfw_A 33 ELMAVKIWFDKGAEGYVHAHRH-SQVSYVVEGEFHVNVDGV-----IKVLTAGDSFFVPPHVDHGAVCPT--GGILIDTF 104 (116)
T ss_dssp TEEEEEEEECTTEEEEEECCSS-EEEEEEEEECEEEEETTE-----EEEECTTCEEEECTTCCEEEEESS--CEEEEEEE
T ss_pred ceEEEEEEECCCCcCCcEECCc-ceEEEEEeeEEEEEECCE-----EEEeCCCCEEEECcCCceeeEeCC--CcEEEEEE
Confidence 3788999999999999999995 999999999999999776 899999999999999999999986 67888888
Q ss_pred cCCCC
Q 027585 176 NSHLP 180 (221)
Q Consensus 176 ~s~~p 180 (221)
....+
T Consensus 105 ~p~~~ 109 (116)
T 2pfw_A 105 SPARE 109 (116)
T ss_dssp ESCCG
T ss_pred CCchh
Confidence 75544
No 56
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.43 E-value=9.6e-13 Score=103.54 Aligned_cols=97 Identities=23% Similarity=0.319 Sum_probs=80.1
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEE-EEecCCcEEEECCCCeEEEEecCCccEEEEE
Q 027585 95 LGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYS-KVLSAGEMFVIPRGLIHFQQNVGEGKALAFT 173 (221)
Q Consensus 95 ~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~-~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 173 (221)
.++.+.++.++||+..++|+|+. .|++||++|++++.++++ . +.|++||++++|+|.+|++.|.+++++++++
T Consensus 46 ~~~~~~~~~~~pg~~~~~H~H~~-~E~~~Vl~G~~~~~~~~~-----~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~ 119 (147)
T 2f4p_A 46 FNTQVYDVVFEPGARTHWHSHPG-GQILIVTRGKGFYQERGK-----PARILKKGDVVEIPPNVVHWHGAAPDEELVHIG 119 (147)
T ss_dssp SSCEEEEEEECTTCEECSEECTT-CEEEEEEEEEEEEEETTS-----CCEEEETTCEEEECTTCCEEEEEBTTBCEEEEE
T ss_pred CcEEEEEEEECCCCccCceECCC-ceEEEEEeCEEEEEECCE-----EEEEECCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 46889999999999999999998 999999999999999876 6 8999999999999999999999999999998
Q ss_pred EEcCCCCeeeeccchhhcCCCCCCHHHHHhh
Q 027585 174 AFNSHLPGAVIVPTTLFASTPSVPNQVLTKT 204 (221)
Q Consensus 174 ~~~s~~pg~~~~~~~lf~~~p~~~~~vla~~ 204 (221)
++...... ...|+ . .+.++.+.++
T Consensus 120 v~~~~~~~---~~~wl-~---~v~~e~~~~~ 143 (147)
T 2f4p_A 120 ISTQVHLG---PAEWL-G---SVTEEEYRKA 143 (147)
T ss_dssp EECCGGGC---CCEEC-C---CCCHHHHHHH
T ss_pred EEccCCCC---Cceec-c---cCCHHHhhhc
Confidence 88654321 22343 3 2666655543
No 57
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.42 E-value=3.1e-13 Score=103.21 Aligned_cols=78 Identities=24% Similarity=0.264 Sum_probs=71.4
Q ss_pred ccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEE
Q 027585 94 TLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFT 173 (221)
Q Consensus 94 ~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 173 (221)
..++.+.+++++||+..++|+|+. .|++||++|++++.++++ .+.+++||++++|+|.+|.+.|.+++++++++
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~~-~e~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~ 118 (126)
T 1vj2_A 45 APNFVMRLFTVEPGGLIDRHSHPW-EHEIFVLKGKLTVLKEQG-----EETVEEGFYIFVEPNEIHGFRNDTDSEVEFLC 118 (126)
T ss_dssp CSSEEEEEEEEEEEEEEEEECCSS-CEEEEEEESEEEEECSSC-----EEEEETTEEEEECTTCCEEEECCSSSCEEEEE
T ss_pred CCCEEEEEEEECCCCcCCceeCCC-cEEEEEEEeEEEEEECCE-----EEEECCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 446889999999999999999995 999999999999999877 89999999999999999999999999999988
Q ss_pred EEcC
Q 027585 174 AFNS 177 (221)
Q Consensus 174 ~~~s 177 (221)
++..
T Consensus 119 v~~~ 122 (126)
T 1vj2_A 119 LIPK 122 (126)
T ss_dssp EEEG
T ss_pred EEcc
Confidence 8753
No 58
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.42 E-value=1.5e-12 Score=98.81 Aligned_cols=76 Identities=20% Similarity=0.194 Sum_probs=69.5
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEE
Q 027585 95 LGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTA 174 (221)
Q Consensus 95 ~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 174 (221)
..+.+...+++||...++|||+. .|++||++|++++.++++ .+.+++||++++|+|..|.+.|.++++++++++
T Consensus 32 ~~~~~~~~~~~pg~~~~~H~H~~-~Ei~~v~~G~~~~~i~~~-----~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i 105 (128)
T 4i4a_A 32 TPFGGAWCIVRPETKSFRHSHNE-YELFIVIQGNAIIRINDE-----DFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTI 105 (128)
T ss_dssp CSSEEEEEEECTTEECCCBCCSS-EEEEEEEESEEEEEETTE-----EEEEETTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred CCcEEEEEEECCCCccCCEecCC-eEEEEEEeCEEEEEECCE-----EEEECCCcEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 35788899999999999999975 999999999999999887 999999999999999999999999999988877
Q ss_pred Ec
Q 027585 175 FN 176 (221)
Q Consensus 175 ~~ 176 (221)
+-
T Consensus 106 ~f 107 (128)
T 4i4a_A 106 WW 107 (128)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 59
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.41 E-value=8.3e-13 Score=101.32 Aligned_cols=80 Identities=14% Similarity=0.068 Sum_probs=63.5
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEe-cCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 97 ISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFT-TNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 97 is~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~-~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
+.+.++.++||+..++|+|+...|++||++|++++.+++ + .+.|++||++++|+|.+|.+.|.+++ +++++++
T Consensus 43 ~~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~~~~~-----~~~l~~Gd~~~ip~g~~H~~~~~~~~-~~~l~~~ 116 (134)
T 2o8q_A 43 AHVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEYEDIG-----AVMLEAGGSAFQPPGVRHRELRHSDD-LEVLEIV 116 (134)
T ss_dssp EEEEEECC-----CCCEEECCSCEEEEEEESEEEEEETTTE-----EEEEETTCEEECCTTCCEEEEEECTT-CEEEEEE
T ss_pred EEEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEECCcE-----EEEecCCCEEEECCCCcEEeEeCCCC-eEEEEEE
Confidence 346666667888899999997799999999999999987 6 89999999999999999999998774 6888777
Q ss_pred cCCCCee
Q 027585 176 NSHLPGA 182 (221)
Q Consensus 176 ~s~~pg~ 182 (221)
.......
T Consensus 117 ~p~~~~~ 123 (134)
T 2o8q_A 117 SPAGFAT 123 (134)
T ss_dssp SSTTCCE
T ss_pred CCCchhe
Confidence 6655443
No 60
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.41 E-value=8.6e-13 Score=106.53 Aligned_cols=74 Identities=19% Similarity=0.118 Sum_probs=66.9
Q ss_pred eEEEEEEEcC-CCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 97 ISMNRVDFAP-GGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 97 is~~~v~l~P-gg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
+...+++++| |+...+|.|+.+.|++||++|++++.++++ .+.|++||+++||+|..|.++|.++++++++++.
T Consensus 88 ~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~g~-----~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~Vq 162 (166)
T 2vpv_A 88 FASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVCKN-----KFLSVKGSTFQIPAFNEYAIANRGNDEAKMFFVQ 162 (166)
T ss_dssp CEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEETTE-----EEEEETTCEEEECTTCEEEEEECSSSCEEEEEEE
T ss_pred ceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEECCE-----EEEEcCCCEEEECCCCCEEEEECCCCCEEEEEEE
Confidence 5778899999 777776656667999999999999999887 9999999999999999999999999999999875
No 61
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.40 E-value=9.7e-13 Score=107.10 Aligned_cols=77 Identities=18% Similarity=0.075 Sum_probs=68.0
Q ss_pred ccceEEEEEEEcCCCcCC--CCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEE
Q 027585 94 TLGISMNRVDFAPGGLNP--PHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALA 171 (221)
Q Consensus 94 ~~gis~~~v~l~Pgg~~~--~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~ 171 (221)
+..+.+.+++++||+..+ +|+|+. .|++||++|++++.++++ .+.|++||+++||++.+|.+.|.+++++ +
T Consensus 101 ~~~~~~~~~~~~pg~~~~~~~H~h~~-~E~~~Vl~G~~~~~~~~~-----~~~l~~GD~i~i~~~~~H~~~n~~~~~~-~ 173 (192)
T 1y9q_A 101 DTGLEIFEITLLDHHQQMSSPHALGV-IEYIHVLEGIMKVFFDEQ-----WHELQQGEHIRFFSDQPHGYAAVTEKAV-F 173 (192)
T ss_dssp TTTEEEEEEEECTTCEEEECCCSTTC-EEEEEEEESCEEEEETTE-----EEEECTTCEEEEECSSSEEEEESSSCEE-E
T ss_pred CCcEEEEEEEECCCCCccCCCCCCCC-EEEEEEEEeEEEEEECCE-----EEEeCCCCEEEEcCCCCeEeECCCCCcE-E
Confidence 345889999999999765 787765 999999999999999877 8999999999999999999999999999 7
Q ss_pred EEEEcC
Q 027585 172 FTAFNS 177 (221)
Q Consensus 172 l~~~~s 177 (221)
++++..
T Consensus 174 l~v~~~ 179 (192)
T 1y9q_A 174 QNIVAY 179 (192)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 777654
No 62
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.40 E-value=1.8e-12 Score=96.46 Aligned_cols=74 Identities=15% Similarity=0.197 Sum_probs=65.9
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
++.+.++.++||...++|+|+. .|++||++|++++.++++ .+.+++||++++|+|..|.+.|.+ ++++++++
T Consensus 39 ~~~~~~~~~~~g~~~~~H~H~~-~e~~~vl~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~~~v~ 110 (115)
T 1yhf_A 39 DLGITVFSLDKGQEIGRHSSPG-DAMVTILSGLAEITIDQE-----TYRVAEGQTIVMPAGIPHALYAVE--AFQMLLVV 110 (115)
T ss_dssp TEEEEEEEECTTCEEEEECCSS-EEEEEEEESEEEEEETTE-----EEEEETTCEEEECTTSCEEEEESS--CEEEEEEE
T ss_pred ceEEEEEEECCCCccCCEECCC-cEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCCEEEEECC--CceEEEEE
Confidence 5778899999999999999996 999999999999998776 899999999999999999999986 56777665
Q ss_pred cC
Q 027585 176 NS 177 (221)
Q Consensus 176 ~s 177 (221)
..
T Consensus 111 ~~ 112 (115)
T 1yhf_A 111 VK 112 (115)
T ss_dssp EC
T ss_pred Ec
Confidence 43
No 63
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.39 E-value=1.4e-12 Score=98.99 Aligned_cols=81 Identities=16% Similarity=0.084 Sum_probs=69.3
Q ss_pred ccceEEEEEEEcCCCcCC-CCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEE
Q 027585 94 TLGISMNRVDFAPGGLNP-PHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAF 172 (221)
Q Consensus 94 ~~gis~~~v~l~Pgg~~~-~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l 172 (221)
..++.+.++.++||...+ +|+|+...+++||++|++++.++++ .+.+++||++++|+|.+|.+.|.++++++++
T Consensus 23 ~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i~~~-----~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~~ 97 (125)
T 3cew_A 23 LTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITIDGE-----KIELQAGDWLRIAPDGKRQISAASDSPIGFL 97 (125)
T ss_dssp CSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEETTE-----EEEEETTEEEEECTTCCEEEEEBTTBCEEEE
T ss_pred CCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEEEcCCCCCEEEE
Confidence 335778889999999888 8999873445559999999999877 8999999999999999999999999999988
Q ss_pred EEEcCCC
Q 027585 173 TAFNSHL 179 (221)
Q Consensus 173 ~~~~s~~ 179 (221)
+++....
T Consensus 98 ~i~~~~~ 104 (125)
T 3cew_A 98 CIQVKAG 104 (125)
T ss_dssp EEEEETT
T ss_pred EEEcCCc
Confidence 8775443
No 64
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.38 E-value=1.2e-12 Score=111.10 Aligned_cols=80 Identities=18% Similarity=0.160 Sum_probs=72.4
Q ss_pred eEEEEEEEcC-CCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 97 ISMNRVDFAP-GGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 97 is~~~v~l~P-gg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
+.+..++++| |+..++|||+. .|++||++|++++.++++ .+.|++||++++|+|.+|.++|.|+++++++.++
T Consensus 145 ~~~~~~~~~p~g~~~~~H~H~~-~e~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~ 218 (243)
T 3h7j_A 145 VEIMLAKIPGNGGEMPFHKHRN-EQIGICIGGGYDMTVEGC-----TVEMKFGTAYFCEPREDHGAINRSEKESKSINIF 218 (243)
T ss_dssp EEEEEEEECTTTEEEEEECCSS-EEEEEECSSCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred eEEEEEEECCCCCcCCCEeCCC-cEEEEEEECEEEEEECCE-----EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 5677888999 88899999997 899999999999999887 8999999999999999999999999999999999
Q ss_pred cCCCCee
Q 027585 176 NSHLPGA 182 (221)
Q Consensus 176 ~s~~pg~ 182 (221)
......+
T Consensus 219 ~p~~~d~ 225 (243)
T 3h7j_A 219 FPPRYNR 225 (243)
T ss_dssp ESCSSCC
T ss_pred cCChhcc
Confidence 8655443
No 65
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.36 E-value=1.8e-12 Score=110.98 Aligned_cols=78 Identities=12% Similarity=0.141 Sum_probs=68.8
Q ss_pred ccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCC-ccEEEE
Q 027585 94 TLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGE-GKALAF 172 (221)
Q Consensus 94 ~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~-~~a~~l 172 (221)
...+.+.+++++||+..++|+|+...|++||++|++++.++++ .+.|++||++++|++.+|++.|.|+ ++++++
T Consensus 176 ~~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~-----~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l 250 (261)
T 1rc6_A 176 GFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNN-----WIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYI 250 (261)
T ss_dssp TCSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEESSSC-----EEEEETTCEEEECSSEEEEEEEC----CEEEE
T ss_pred CCceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEeCCCCcCEEEE
Confidence 4458899999999999999999877999999999999999887 9999999999999999999999999 999998
Q ss_pred EEEc
Q 027585 173 TAFN 176 (221)
Q Consensus 173 ~~~~ 176 (221)
.+.+
T Consensus 251 ~~~d 254 (261)
T 1rc6_A 251 YSKD 254 (261)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8754
No 66
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.35 E-value=7.7e-12 Score=93.28 Aligned_cols=72 Identities=14% Similarity=0.200 Sum_probs=63.8
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEEc
Q 027585 97 ISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFN 176 (221)
Q Consensus 97 is~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~ 176 (221)
+.+..+.+.||...++|+|+. .|++||++|++++.++++ .+.|++||++++|+|.+|.+.|. ++++++++..
T Consensus 38 ~~~~~~~~~~g~~~~~H~h~~-~e~~~vl~G~~~~~i~~~-----~~~l~~Gd~i~i~~~~~H~~~~~--~~~~~~~i~~ 109 (114)
T 2ozj_A 38 VQISLFSFADGESVSEEEYFG-DTLYLILQGEAVITFDDQ-----KIDLVPEDVLMVPAHKIHAIAGK--GRFKMLQITL 109 (114)
T ss_dssp EEEEEEEEETTSSCCCBCCSS-CEEEEEEEEEEEEEETTE-----EEEECTTCEEEECTTCCBEEEEE--EEEEEEEEEE
T ss_pred ceEEEEEECCCCccccEECCC-CeEEEEEeCEEEEEECCE-----EEEecCCCEEEECCCCcEEEEeC--CCcEEEEEEE
Confidence 567777889999999999987 999999999999999877 89999999999999999999996 5677776654
No 67
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.34 E-value=9.6e-13 Score=97.29 Aligned_cols=78 Identities=13% Similarity=0.138 Sum_probs=65.1
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
.+.+.+++++||+..+||.|+...+++++++|++++... +|+.....+++||++++|+|..|++.|.|+++++++.+-
T Consensus 16 ~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~~--dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~vE 93 (98)
T 2ozi_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAP--DGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEIE 93 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECT--TSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEEEE
T ss_pred cEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEeC--CCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEEEE
Confidence 478999999999999999998755666777888887653 333235789999999999999999999999999999874
No 68
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.33 E-value=5.4e-12 Score=92.78 Aligned_cols=75 Identities=19% Similarity=0.162 Sum_probs=64.8
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEE-EEEEeCEEEEEEE-ecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASES-GIVIKGKLLVGFF-TTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFT 173 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei-~yVl~G~~~v~~~-~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 173 (221)
++.+.++.+.||...++|+|+...|+ +||++|++++.++ ++ .+.|++||++++|+|..|.+.|.++ ++++.
T Consensus 32 ~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~l~ 104 (110)
T 2q30_A 32 NFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDGDA-----VIPAPRGAVLVAPISTPHGVRAVTD--MKVLV 104 (110)
T ss_dssp SCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGGGC-----EEEECTTEEEEEETTSCEEEEESSS--EEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeCCCE-----EEEECCCCEEEeCCCCcEEEEEcCC--cEEEE
Confidence 46788999999999999999864687 8999999999987 46 8999999999999999999999765 56666
Q ss_pred EEcC
Q 027585 174 AFNS 177 (221)
Q Consensus 174 ~~~s 177 (221)
+++.
T Consensus 105 ~~~p 108 (110)
T 2q30_A 105 TIAP 108 (110)
T ss_dssp EEES
T ss_pred EECC
Confidence 6653
No 69
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.32 E-value=1.5e-11 Score=106.10 Aligned_cols=76 Identities=13% Similarity=0.231 Sum_probs=69.9
Q ss_pred cceEEEEEEEcCCCcCCC-CCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCC-ccEEEE
Q 027585 95 LGISMNRVDFAPGGLNPP-HSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGE-GKALAF 172 (221)
Q Consensus 95 ~gis~~~v~l~Pgg~~~~-H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~-~~a~~l 172 (221)
..+.+.+++++||+..++ |+|+. .|++||++|++++.++++ .+.|++||+++||++.+|++.|.++ ++++++
T Consensus 180 ~~~~~~~~~l~pg~~~~~~H~H~~-~E~~yVl~G~~~~~i~~~-----~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l 253 (274)
T 1sef_A 180 FDMNMHILSFEPGASHAYIETHVQ-EHGAYLISGQGMYNLDNE-----WYPVEKGDYIFMSAYVPQAAYAVGREEPLMYV 253 (274)
T ss_dssp CSEEEEEEEECTTCBCSSCBCCSC-CEEEEEEECEEEEEETTE-----EEEEETTCEEEECTTCCEEEEEECSSSCEEEE
T ss_pred CCEEEEEEEECCCCccCcceeccC-eEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeCCCCCCEEEE
Confidence 468899999999999888 99976 899999999999999887 8999999999999999999999999 999988
Q ss_pred EEEc
Q 027585 173 TAFN 176 (221)
Q Consensus 173 ~~~~ 176 (221)
+..+
T Consensus 254 ~~~~ 257 (274)
T 1sef_A 254 YSKD 257 (274)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 8753
No 70
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.31 E-value=5.8e-12 Score=96.07 Aligned_cols=74 Identities=20% Similarity=0.227 Sum_probs=64.2
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
.+++..++++||...++|. ..+|++||++|++++.++++ ++.|++||+++||+|..|.+.|.+ ++++++.+.
T Consensus 39 ~~~~~~~~~~pG~~~~~H~--~~~E~~~Vl~G~~~~~~~g~-----~~~l~~GD~v~ip~g~~H~~~~~~-~~~~~l~v~ 110 (119)
T 3lwc_A 39 PITIGYGRYAPGQSLTETM--AVDDVMIVLEGRLSVSTDGE-----TVTAGPGEIVYMPKGETVTIRSHE-EGALTAYVT 110 (119)
T ss_dssp CCEEEEEEECTTCEEEEEC--SSEEEEEEEEEEEEEEETTE-----EEEECTTCEEEECTTCEEEEEEEE-EEEEEEEEE
T ss_pred CEEEEEEEECCCCCcCccC--CCCEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCEEEEEcCC-CCeEEEEEE
Confidence 4788899999998776664 56999999999999999766 899999999999999999999875 788888877
Q ss_pred cC
Q 027585 176 NS 177 (221)
Q Consensus 176 ~s 177 (221)
+.
T Consensus 111 ~P 112 (119)
T 3lwc_A 111 YP 112 (119)
T ss_dssp EC
T ss_pred CC
Confidence 64
No 71
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.28 E-value=1.3e-11 Score=108.02 Aligned_cols=78 Identities=19% Similarity=0.168 Sum_probs=70.8
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
.+++.++.+.||+..++|||++..|++||++|++++.++++ .+.|++||++++|+|.+|.+.|.++ +++++.++
T Consensus 45 ~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~~~-----~~~l~~Gd~~~~p~~~~H~~~n~~~-~~~~~~~~ 118 (337)
T 1y3t_A 45 LFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTLDGE-----RYLLISGDYANIPAGTPHSYRMQSH-RTRLVSYT 118 (337)
T ss_dssp SEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECST-TEEEEEEE
T ss_pred eEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEECCE-----EEEECCCCEEEECCCCcEEEEECCC-CeEEEEEE
Confidence 57899999999999999999866999999999999998776 8999999999999999999999987 68999887
Q ss_pred cCCC
Q 027585 176 NSHL 179 (221)
Q Consensus 176 ~s~~ 179 (221)
+...
T Consensus 119 ~p~~ 122 (337)
T 1y3t_A 119 MKGN 122 (337)
T ss_dssp ETTS
T ss_pred CCCC
Confidence 7654
No 72
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.27 E-value=3.7e-11 Score=102.19 Aligned_cols=77 Identities=14% Similarity=0.201 Sum_probs=69.8
Q ss_pred ccceEEEEEEEcCCCcCCC-CCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEE
Q 027585 94 TLGISMNRVDFAPGGLNPP-HSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAF 172 (221)
Q Consensus 94 ~~gis~~~v~l~Pgg~~~~-H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l 172 (221)
+..+.+.+++++||+..+. |.|.. +|.+||++|++++.++++ .+.|++||+++++++.+|+++|.|+++++++
T Consensus 162 ~~~~~~~~~tl~PG~~~~~~~~h~~-ee~~~vLeG~~~~~~~~~-----~~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl 235 (246)
T 1sfn_A 162 AFDFMVSTMSFAPGASLPYAEVHYM-EHGLLMLEGEGLYKLEEN-----YYPVTAGDIIWMGAHCPQWYGALGRNWSKYL 235 (246)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCCSS-CEEEEEEECEEEEEETTE-----EEEEETTCEEEECTTCCEEEEEESSSCEEEE
T ss_pred CCCeEEEEEEECCCCccCcccCCCc-eEEEEEEECEEEEEECCE-----EEEcCCCCEEEECCCCCEEEEcCCCCCEEEE
Confidence 4568999999999999887 45654 999999999999999887 9999999999999999999999999999999
Q ss_pred EEEc
Q 027585 173 TAFN 176 (221)
Q Consensus 173 ~~~~ 176 (221)
.+-+
T Consensus 236 ~~kd 239 (246)
T 1sfn_A 236 LYKD 239 (246)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8764
No 73
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.25 E-value=1.4e-11 Score=90.99 Aligned_cols=69 Identities=19% Similarity=0.207 Sum_probs=56.5
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEe-cCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFT-TNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~-~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
..++.+.||. .++|+|+...|++||++|++++.+++ + .+.|++||++++|+|.+|++.|. ++++++.+-
T Consensus 30 ~~~~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~--~~~~~l~i~ 99 (107)
T 2i45_A 30 QFHLVKLLGD-YGWHTHGYSDKVLFAVEGDMAVDFADGG-----SMTIREGEMAVVPKSVSHRPRSE--NGCSLVLIE 99 (107)
T ss_dssp EEEEEEEEEE-CCCBCC--CCEEEEESSSCEEEEETTSC-----EEEECTTEEEEECTTCCEEEEEE--EEEEEEEEE
T ss_pred EEEEEECCCC-CcceeCCCCCEEEEEEeCEEEEEECCCc-----EEEECCCCEEEECCCCcEeeEeC--CCeEEEEEE
Confidence 4556677776 46999987799999999999999988 6 89999999999999999999995 456666543
No 74
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.25 E-value=1.5e-11 Score=106.68 Aligned_cols=76 Identities=20% Similarity=0.184 Sum_probs=68.8
Q ss_pred cceEEEEEEEcCCCcC--CCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEE
Q 027585 95 LGISMNRVDFAPGGLN--PPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAF 172 (221)
Q Consensus 95 ~gis~~~v~l~Pgg~~--~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l 172 (221)
..+.+.+++++||+.. ++|.|+ ..|++||++|++++.++++ ++.|++||+++||+|..|.++|.++++++++
T Consensus 66 ~~~~~~~~~l~PG~~~~~~~h~H~-~eE~~~Vl~G~l~v~v~g~-----~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l 139 (278)
T 1sq4_A 66 ETFSQYIVELAPNGGSDKPEQDPN-AEAVLFVVEGELSLTLQGQ-----VHAMQPGGYAFIPPGADYKVRNTTGQHTRFH 139 (278)
T ss_dssp CSCEEEEEEEEEEEEESSCCCCTT-EEEEEEEEESCEEEEESSC-----EEEECTTEEEEECTTCCEEEECCSSSCEEEE
T ss_pred CcEEEEEEEECCCCccCCCCcCCC-ceEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCcEEEEECCCCCEEEE
Confidence 3588999999999875 567787 4999999999999999887 9999999999999999999999999999999
Q ss_pred EEEc
Q 027585 173 TAFN 176 (221)
Q Consensus 173 ~~~~ 176 (221)
++..
T Consensus 140 ~v~~ 143 (278)
T 1sq4_A 140 WIRK 143 (278)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8874
No 75
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=99.25 E-value=4.4e-11 Score=89.87 Aligned_cols=74 Identities=19% Similarity=0.332 Sum_probs=59.3
Q ss_pred ceEEEEEEEcCCCcCCC---CCCCCCcEEEEEEeCEEEEEEEecCCeEEE--EEecCCcEEEECCCCeEEEEecCCc-cE
Q 027585 96 GISMNRVDFAPGGLNPP---HSHPRASESGIVIKGKLLVGFFTTNNVFYS--KVLSAGEMFVIPRGLIHFQQNVGEG-KA 169 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~---H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~--~~L~~GDv~~~P~g~~H~~~N~g~~-~a 169 (221)
++.+.++. .+|...++ |.|+ ..|++||++|++++.++++ . +.|++||+++||+|..|++.|.+++ ++
T Consensus 30 ~~~i~~i~-~~g~~~~~~~~~~~~-~~E~~~Vl~G~~~l~~~~~-----~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~~~ 102 (112)
T 2opk_A 30 GLKIERII-SNGQASPPGFWYDSP-QDEWVMVVSGSAGIECEGD-----TAPRVMRPGDWLHVPAHCRHRVAWTDGGEPT 102 (112)
T ss_dssp TEEEEEEE-ESSCCCCTTCCBCCS-SEEEEEEEESCEEEEETTC-----SSCEEECTTEEEEECTTCCEEEEEECSSSCE
T ss_pred CEEEEEEE-eCCccCCCCccccCC-ccEEEEEEeCeEEEEECCE-----EEEEEECCCCEEEECCCCcEEEEeCCCCCCE
Confidence 45566664 44555444 4455 4999999999999999887 6 8999999999999999999999876 67
Q ss_pred EEEEEEc
Q 027585 170 LAFTAFN 176 (221)
Q Consensus 170 ~~l~~~~ 176 (221)
++++++.
T Consensus 103 ~~l~v~~ 109 (112)
T 2opk_A 103 VWLAVHC 109 (112)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 7777765
No 76
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.25 E-value=1.6e-11 Score=104.97 Aligned_cols=77 Identities=17% Similarity=0.061 Sum_probs=68.4
Q ss_pred cceEEEEEEEcCCCcCCCCCC-CCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEE
Q 027585 95 LGISMNRVDFAPGGLNPPHSH-PRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFT 173 (221)
Q Consensus 95 ~gis~~~v~l~Pgg~~~~H~H-p~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 173 (221)
..+.+.+++++||+....|.| ++.+|++||++|++++.++++ ++.|++||+++||++.+|.++|.+++++++++
T Consensus 57 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~~~-----~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~ 131 (261)
T 1rc6_A 57 ASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGK-----TFALSEGGYLYCPPGSLMTFVNAQAEDSQIFL 131 (261)
T ss_dssp CSSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEETTE-----EEEEETTEEEEECTTCCCEEEECSSSCEEEEE
T ss_pred CcEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeCCCCCEEEEE
Confidence 357889999999997766554 566899999999999999887 99999999999999999999999999999999
Q ss_pred EEc
Q 027585 174 AFN 176 (221)
Q Consensus 174 ~~~ 176 (221)
+..
T Consensus 132 v~~ 134 (261)
T 1rc6_A 132 YKR 134 (261)
T ss_dssp EEE
T ss_pred EEe
Confidence 874
No 77
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.25 E-value=1.3e-11 Score=96.01 Aligned_cols=73 Identities=14% Similarity=0.101 Sum_probs=62.7
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
.+++..++++|| .+|||...+|++||++|++++.++++ .+.|++||+++||+|..|.+.| ++++++++++
T Consensus 56 ~~~~~~~~~~pG---~~~~h~~~~E~~~VLeG~~~l~~~g~-----~~~l~~GD~i~~p~g~~h~~~~--~~~~~~l~v~ 125 (133)
T 2pyt_A 56 SMAAGFMQWDNA---FFPWTLNYDEIDMVLEGELHVRHEGE-----TMIAKAGDVMFIPKGSSIEFGT--PTSVRFLYVA 125 (133)
T ss_dssp SSEEEEEEEEEE---EEEEECSSEEEEEEEEEEEEEEETTE-----EEEEETTCEEEECTTCEEEEEE--EEEEEEEEEE
T ss_pred cEEEEEEEECCC---CccccCCCCEEEEEEECEEEEEECCE-----EEEECCCcEEEECCCCEEEEEe--CCCEEEEEEE
Confidence 478889999999 45666556999999999999999876 8999999999999999999997 4678888887
Q ss_pred cCC
Q 027585 176 NSH 178 (221)
Q Consensus 176 ~s~ 178 (221)
...
T Consensus 126 ~p~ 128 (133)
T 2pyt_A 126 WPA 128 (133)
T ss_dssp EST
T ss_pred cCC
Confidence 543
No 78
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.24 E-value=1.9e-11 Score=103.53 Aligned_cols=74 Identities=19% Similarity=0.226 Sum_probs=67.3
Q ss_pred EEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEE-ECCCCeEEEEecCCccEEEEEEEc
Q 027585 98 SMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFV-IPRGLIHFQQNVGEGKALAFTAFN 176 (221)
Q Consensus 98 s~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~-~P~g~~H~~~N~g~~~a~~l~~~~ 176 (221)
.+..+.++||...++|||+. .|++||++|++++.++++ .+.|++||.++ +|+|.+|.+.|.++++++++.+..
T Consensus 35 ~~~~~~~~pg~~~~~H~H~~-~e~~~Vl~G~~~~~~~~~-----~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~i~r 108 (243)
T 3h7j_A 35 EVLMSYVPPHTNVEPHQHKE-VQIGMVVSGELMMTVGDV-----TRKMTALESAYIAPPHVPHGARNDTDQEVIAIDIKR 108 (243)
T ss_dssp EEEEEEECTTEEEEEECCSS-EEEEEEEESEEEEEETTE-----EEEEETTTCEEEECTTCCEEEEECSSSCEEEEEEEE
T ss_pred EEEEEEECCCCccCCEECCC-cEEEEEEEeEEEEEECCE-----EEEECCCCEEEEcCCCCcEeeEeCCCCcEEEEEEec
Confidence 56777899999999999996 999999999999999776 89999999996 999999999999999999998754
Q ss_pred C
Q 027585 177 S 177 (221)
Q Consensus 177 s 177 (221)
-
T Consensus 109 ~ 109 (243)
T 3h7j_A 109 L 109 (243)
T ss_dssp C
T ss_pred c
Confidence 3
No 79
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.21 E-value=2.7e-11 Score=104.38 Aligned_cols=76 Identities=17% Similarity=0.083 Sum_probs=67.9
Q ss_pred cceEEEEEEEcCCCcCCCCC-CCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEE
Q 027585 95 LGISMNRVDFAPGGLNPPHS-HPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFT 173 (221)
Q Consensus 95 ~gis~~~v~l~Pgg~~~~H~-Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 173 (221)
..+.+.+++++||+....|. |++.+|++||++|++++.++++ ++.|++||+++||++.+|.++|.+++++++++
T Consensus 60 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~~~-----~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~ 134 (274)
T 1sef_A 60 ATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSDGQE-----THELEAGGYAYFTPEMKMYLANAQEADTEVFL 134 (274)
T ss_dssp CSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEECSSC-----EEEEETTEEEEECTTSCCEEEESSSSCEEEEE
T ss_pred CcEEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeCCCCCEEEEE
Confidence 35788999999998766554 4566899999999999999887 99999999999999999999999999999998
Q ss_pred EE
Q 027585 174 AF 175 (221)
Q Consensus 174 ~~ 175 (221)
+.
T Consensus 135 v~ 136 (274)
T 1sef_A 135 YK 136 (274)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 80
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.21 E-value=1.5e-10 Score=101.37 Aligned_cols=75 Identities=15% Similarity=0.148 Sum_probs=65.2
Q ss_pred EEEEEEcC-CCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEEcC
Q 027585 99 MNRVDFAP-GGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFNS 177 (221)
Q Consensus 99 ~~~v~l~P-gg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s 177 (221)
...+.+.| |...++|||++..|++||++|++++.++++ ++.|++||++++|++.+|++.|.++ +++++.+++.
T Consensus 219 ~~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i~~~-----~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~~~ 292 (337)
T 1y3t_A 219 IVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWTDGQ-----EIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLVP 292 (337)
T ss_dssp EEEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECSS-SEEEEEEEES
T ss_pred EEEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCeEEEEECCC-CeEEEEEEcC
Confidence 34456656 567889999966999999999999999876 8999999999999999999999988 8999999865
Q ss_pred CC
Q 027585 178 HL 179 (221)
Q Consensus 178 ~~ 179 (221)
..
T Consensus 293 ~~ 294 (337)
T 1y3t_A 293 GL 294 (337)
T ss_dssp ST
T ss_pred cc
Confidence 54
No 81
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.20 E-value=6.9e-11 Score=102.00 Aligned_cols=103 Identities=15% Similarity=0.048 Sum_probs=79.4
Q ss_pred cccccCCeEEecccCCCCcccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEE-
Q 027585 56 AEVTSGDFFFDGLSKEGNTTIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFF- 134 (221)
Q Consensus 56 ~~~~~~df~~~~l~~~~~~~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~- 134 (221)
+-.+.+|++.+.+ | ...+..++.+..... + ..+.+.+++++||+..+.|.|. .+|++||++|++++.++
T Consensus 38 avI~~~~iv~s~l--P---g~~~~~~~vL~sP~~-G---~~f~~~lv~l~PGg~s~~~~h~-~EEfiyVleG~l~l~l~~ 107 (266)
T 4e2q_A 38 ALITPESHVYSPL--P---DWTNTLGAYLITPAT-G---SHFVMYLAKMKEMSSSGLPPQD-IERLIFVVEGAVTLTNTS 107 (266)
T ss_dssp EEECGGGCCCEEC--T---TSSSEEEEEEECGGG-T---CSSEEEEEEECSSEECCCCCTT-EEEEEEEEEECEEEEC--
T ss_pred EEECccceEEeeC--C---CCcCEEEEEEcCCCC-C---CcEEEEEEEECcCCcCCCCCCC-CeEEEEEEEEEEEEEECC
Confidence 4444566666644 2 234455555544433 2 3588999999999988888665 59999999999999998
Q ss_pred ecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 135 TTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 135 ~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
++ +++|++||.++||++..|+++|. ++++++++.
T Consensus 108 g~-----~~~L~~Gds~y~p~~~~H~~~N~--~~Ar~l~V~ 141 (266)
T 4e2q_A 108 SS-----SKKLTVDSYAYLPPNFHHSLDCV--ESATLVVFE 141 (266)
T ss_dssp CC-----CEEECTTEEEEECTTCCCEEEES--SCEEEEEEE
T ss_pred Cc-----EEEEcCCCEEEECCCCCEEEEeC--CCEEEEEEE
Confidence 77 89999999999999999999994 689988884
No 82
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.20 E-value=1e-10 Score=104.34 Aligned_cols=82 Identities=21% Similarity=0.159 Sum_probs=66.4
Q ss_pred ceEEEEEEEcCCC-cCC--CCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEE
Q 027585 96 GISMNRVDFAPGG-LNP--PHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAF 172 (221)
Q Consensus 96 gis~~~v~l~Pgg-~~~--~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l 172 (221)
.+.+. ..+.|++ ..+ +|+|++..|++||++|++++.+++.+|+...+.|++||++++|+|.+|++.|.++++ +++
T Consensus 47 ~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~l 124 (350)
T 1juh_A 47 AFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-EMT 124 (350)
T ss_dssp SCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTE-EEE
T ss_pred cEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCC-EEE
Confidence 35666 4555655 455 999997799999999999999998444334899999999999999999999998876 888
Q ss_pred EEEcCCC
Q 027585 173 TAFNSHL 179 (221)
Q Consensus 173 ~~~~s~~ 179 (221)
.++....
T Consensus 125 ~v~~p~~ 131 (350)
T 1juh_A 125 GVIVPGG 131 (350)
T ss_dssp EEEESSC
T ss_pred EEEcCcc
Confidence 8876543
No 83
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=99.19 E-value=9.8e-11 Score=93.54 Aligned_cols=71 Identities=15% Similarity=0.108 Sum_probs=60.5
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCcEEEEEEe--CEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEE
Q 027585 97 ISMNRVDFAPGGLNPPHSHPRASESGIVIK--GKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTA 174 (221)
Q Consensus 97 is~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~--G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 174 (221)
+++..+++ ++..++|||+...|++||++ |++++.++++ .+.|++||+++||+|..|++.+ +++++++
T Consensus 47 ~sv~~v~~--g~~~~~H~H~~~~E~~yVLe~~G~g~v~idge-----~~~l~~GD~v~IPpg~~H~i~g----~l~~L~I 115 (157)
T 4h7l_A 47 VSVHYTQI--TKAARTHYHREHQEIYVVLDHAAHATIELNGQ-----SYPLTKLLAISIPPLVRHRIVG----EATIINI 115 (157)
T ss_dssp CEEEEEEE--CSCCCCBBCSSCEEEEEEEEECTTCEEEETTE-----EEECCTTEEEEECTTCCEEEES----CEEEEEE
T ss_pred EEEEEEeC--CCCccceECCCCcEEEEEEecCcEEEEEECCE-----EEEeCCCCEEEECCCCeEeeEC----CEEEEEE
Confidence 45555554 55678999987789999999 9999999887 8999999999999999999973 7999998
Q ss_pred EcCC
Q 027585 175 FNSH 178 (221)
Q Consensus 175 ~~s~ 178 (221)
++.+
T Consensus 116 ~~Pp 119 (157)
T 4h7l_A 116 VSPP 119 (157)
T ss_dssp EESS
T ss_pred ECCC
Confidence 8754
No 84
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=99.18 E-value=1.2e-10 Score=84.33 Aligned_cols=60 Identities=32% Similarity=0.436 Sum_probs=52.3
Q ss_pred CcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEE
Q 027585 108 GLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTA 174 (221)
Q Consensus 108 g~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 174 (221)
+..++|+|+...|++||++|++++.++++ .+.+++||++++|+|..|.+.|.+ +++++.+
T Consensus 40 ~~~~~H~H~~~~e~~~v~~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~i 99 (102)
T 3d82_A 40 GEFVWHEHADTDEVFIVMEGTLQIAFRDQ-----NITLQAGEMYVIPKGVEHKPMAKE--ECKIMII 99 (102)
T ss_dssp EECCCBCCTTCCEEEEEEESEEEEECSSC-----EEEEETTEEEEECTTCCBEEEEEE--EEEEEEE
T ss_pred CCCCceeCCCCcEEEEEEeCEEEEEECCE-----EEEEcCCCEEEECCCCeEeeEcCC--CCEEEEE
Confidence 45899999977999999999999999877 899999999999999999999973 5555543
No 85
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.18 E-value=6.5e-11 Score=99.37 Aligned_cols=73 Identities=18% Similarity=0.191 Sum_probs=65.2
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
.+.+..+.++||...++|+|+. .|++||++|++++.++++ .+.+++||.+++|+|.+|++.|. .++++++.++
T Consensus 152 ~~~~~~~~~~~G~~~~~H~H~~-~e~~~Vl~G~~~~~i~g~-----~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~ll~~ 224 (227)
T 3rns_A 152 NLVMTIMSFWKGESLDPHKAPG-DALVTVLDGEGKYYVDGK-----PFIVKKGESAVLPANIPHAVEAE-TENFKMLLIL 224 (227)
T ss_dssp TEEEEEEEECTTCEEEEECCSS-EEEEEEEEEEEEEEETTE-----EEEEETTEEEEECTTSCEEEECC-SSCEEEEEEE
T ss_pred CeEEEEEEECCCCccCCEECCC-cEEEEEEeEEEEEEECCE-----EEEECCCCEEEECCCCcEEEEeC-CCCEEEEEEE
Confidence 4778899999999999999996 999999999999999887 99999999999999999999993 5667776654
No 86
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.17 E-value=3.1e-11 Score=108.02 Aligned_cols=75 Identities=17% Similarity=0.302 Sum_probs=68.5
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEE-EEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLV-GFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTA 174 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v-~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 174 (221)
.+.+....++||+..++|+|+. .|++||++|++++ .++++ .+.+++||++++|+|..|.+.|.++++++++.+
T Consensus 99 ~l~~~~~~l~PG~~~~~H~H~~-~e~~yVl~G~g~~t~v~g~-----~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v 172 (354)
T 2d40_A 99 TLYAGLQLIMPGEVAPSHRHNQ-SALRFIVEGKGAFTAVDGE-----RTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDG 172 (354)
T ss_dssp SCEEEEEEECTTCEEEEEEESS-CEEEEEEECSSCEEEETTE-----EEECCTTCEEEECTTSCEEEECCSSSCEEEEEE
T ss_pred cEEEEEEEECCCCCcCCeecCc-ceEEEEEEEEEEEEEECCE-----EEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 5788999999999999999986 8999999999988 66555 899999999999999999999999999999988
Q ss_pred Ec
Q 027585 175 FN 176 (221)
Q Consensus 175 ~~ 176 (221)
.+
T Consensus 173 ~d 174 (354)
T 2d40_A 173 LD 174 (354)
T ss_dssp EC
T ss_pred EC
Confidence 64
No 87
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.15 E-value=1.9e-10 Score=99.66 Aligned_cols=83 Identities=17% Similarity=0.143 Sum_probs=72.8
Q ss_pred CCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccE
Q 027585 90 PGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKA 169 (221)
Q Consensus 90 P~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a 169 (221)
|.-....+.+.+++++||+..+.|.|+.-+|.+||++|++.+.++++ .+.|++||+++++.+..|+++|.|++++
T Consensus 184 p~~~~~~~~~~~~~l~pG~~i~~~~~h~~e~~~~il~G~~~~~~~~~-----~~~v~~GD~~~~~~~~~h~~~n~g~~~~ 258 (278)
T 1sq4_A 184 MSDMRHDMHVNIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYRLNQD-----WVEVEAGDFMWLRAFCPQACYSGGPGRF 258 (278)
T ss_dssp TTCTTCSEEEEEEEECSSSEESCCCCCSEEEEEEEEECEEEEEETTE-----EEEEETTCEEEEEESCCEEEECCSSSCE
T ss_pred CCCcCCCeEEEEEEECCCCCcCCCCCCCccEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCCEEEEcCCCCCE
Confidence 43445678999999999999987444444899999999999999887 9999999999999999999999999999
Q ss_pred EEEEEEcC
Q 027585 170 LAFTAFNS 177 (221)
Q Consensus 170 ~~l~~~~s 177 (221)
+++.+.+-
T Consensus 259 ~yl~~~d~ 266 (278)
T 1sq4_A 259 RYLLYKDV 266 (278)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEc
Confidence 99998864
No 88
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.14 E-value=2.5e-10 Score=102.09 Aligned_cols=90 Identities=16% Similarity=0.016 Sum_probs=75.2
Q ss_pred CCeeEEEeecc-ccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECC
Q 027585 77 FGSAVTPANVL-AFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPR 155 (221)
Q Consensus 77 ~g~~v~~~~~~-~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~ 155 (221)
.|+.+..++.. .++...++ ++....++||+..++|||+. .|+.||++|++++.++++ ++.+++||++++|+
T Consensus 249 ~G~~~~~~np~t~~~~~~ti--~~~~~~l~pG~~~~~H~h~~-~ev~~v~~G~g~~~v~~~-----~~~~~~GD~~~vP~ 320 (354)
T 2d40_A 249 DGYKMRYVNPVTGGYPMPSM--GAFLQLLPKGFASRVARTTD-STIYHVVEGSGQVIIGNE-----TFSFSAKDIFVVPT 320 (354)
T ss_dssp TBEEEEECCTTTSSCSSSSC--EEEEEEECTTCBCCCBEESS-CEEEEEEEEEEEEEETTE-----EEEEETTCEEEECT
T ss_pred CCeEEEEeCCCcCCCCCCcc--eeEEEEECCCCCCCceecCC-cEEEEEEeCeEEEEECCE-----EEEEcCCCEEEECC
Confidence 46677777743 56666654 55567999999999999998 599999999999999765 89999999999999
Q ss_pred CCeEEEEecCCccEEEEEEEc
Q 027585 156 GLIHFQQNVGEGKALAFTAFN 176 (221)
Q Consensus 156 g~~H~~~N~g~~~a~~l~~~~ 176 (221)
+..|++.|. ++++++++.+
T Consensus 321 ~~~H~~~n~--e~~~l~~~~d 339 (354)
T 2d40_A 321 WHGVSFQTT--QDSVLFSFSD 339 (354)
T ss_dssp TCCEEEEEE--EEEEEEEEES
T ss_pred CCeEEEEeC--CCEEEEEEcC
Confidence 999999993 7788887754
No 89
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.13 E-value=2.1e-10 Score=96.22 Aligned_cols=74 Identities=8% Similarity=-0.047 Sum_probs=67.2
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
+..+.++.++||...++|.|+. +|++||++|++++.++++ ++.|++||++++|+|.+|.+.|. ++++++.+.
T Consensus 36 ~~~~~~~~~~~G~~~~~h~h~~-~~~~~Vl~G~~~~~i~~~-----~~~l~~Gd~~~~p~~~~H~~~a~--~~~~~l~i~ 107 (227)
T 3rns_A 36 NSYISLFSLAKDEEITAEAMLG-NRYYYCFNGNGEIFIENN-----KKTISNGDFLEITANHNYSIEAR--DNLKLIEIG 107 (227)
T ss_dssp SEEEEEEEECTTCEEEECSCSS-CEEEEEEESEEEEEESSC-----EEEEETTEEEEECSSCCEEEEES--SSEEEEEEE
T ss_pred CcEEEEEEECCCCccCccccCC-CEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCCEEEEEC--CCcEEEEEE
Confidence 4678999999999999999997 999999999999999887 89999999999999999999985 468888876
Q ss_pred cC
Q 027585 176 NS 177 (221)
Q Consensus 176 ~s 177 (221)
..
T Consensus 108 ~~ 109 (227)
T 3rns_A 108 EK 109 (227)
T ss_dssp EC
T ss_pred ee
Confidence 54
No 90
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=99.12 E-value=1.3e-10 Score=92.38 Aligned_cols=74 Identities=16% Similarity=0.036 Sum_probs=60.9
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
.+++..++++ ++. .|||...+|+.||++|++++.++++ ++.|++||+++||+|..|++.|. ++++++++.
T Consensus 65 ~~s~g~~~~e-~~~--~~~~~~~eE~~yVLeG~~~l~i~g~-----~~~l~~GD~i~iP~G~~h~~~n~--~~a~~l~V~ 134 (151)
T 4axo_A 65 RLGCGMMEMK-ETT--FDWTLNYDEIDYVIDGTLDIIIDGR-----KVSASSGELIFIPKGSKIQFSVP--DYARFIYVT 134 (151)
T ss_dssp SCEEEEEEEE-EEE--EEEECSSEEEEEEEEEEEEEEETTE-----EEEEETTCEEEECTTCEEEEEEE--EEEEEEEEE
T ss_pred cEEEEEEEEc-Ccc--ccEeCCCcEEEEEEEeEEEEEECCE-----EEEEcCCCEEEECCCCEEEEEeC--CCEEEEEEE
Confidence 3667777776 433 4566666999999999999998666 89999999999999999999997 789999888
Q ss_pred cCCC
Q 027585 176 NSHL 179 (221)
Q Consensus 176 ~s~~ 179 (221)
....
T Consensus 135 ~P~~ 138 (151)
T 4axo_A 135 YPAD 138 (151)
T ss_dssp ECSC
T ss_pred CCCC
Confidence 6543
No 91
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.12 E-value=4.3e-10 Score=97.03 Aligned_cols=77 Identities=12% Similarity=0.213 Sum_probs=69.5
Q ss_pred ccceEEEEEEEcCCCcCCC-CCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEE
Q 027585 94 TLGISMNRVDFAPGGLNPP-HSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAF 172 (221)
Q Consensus 94 ~~gis~~~v~l~Pgg~~~~-H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l 172 (221)
...+.+.+++++||+..+. |.|.. +|.+||++|++.+.++++ .+.+++||+++++++.+|++.|.|++++++|
T Consensus 183 ~~d~~~~~~t~~PG~~~p~~e~H~~-eh~~~vL~G~g~y~l~~~-----~~~V~~GD~i~~~~~~~h~~~n~G~e~~~yl 256 (266)
T 4e2q_A 183 AYDFNIHTMDFQPGEFLNVKEVHYN-QHGLLLLEGQGIYRLGDN-----WYPVQAGDVIWMAPFVPQWYAALGKTRSRYL 256 (266)
T ss_dssp TCSEEEEEEEECTTCBCSSCCCCSC-CEEEEEEECEEEEEETTE-----EEEEETTCEEEECTTCCEEEEEESSSCEEEE
T ss_pred ccceEEEEEEECCCcCcCCceEccc-ceEEEEEeceEEEEECCE-----EEEecCCCEEEECCCCcEEEEeCCCCCEEEE
Confidence 4468899999999999996 77765 899999999999999887 9999999999999999999999999999988
Q ss_pred EEEc
Q 027585 173 TAFN 176 (221)
Q Consensus 173 ~~~~ 176 (221)
.--+
T Consensus 257 ~ykd 260 (266)
T 4e2q_A 257 LYKD 260 (266)
T ss_dssp EEEE
T ss_pred EEcc
Confidence 6543
No 92
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=99.10 E-value=2.3e-10 Score=95.69 Aligned_cols=76 Identities=17% Similarity=0.161 Sum_probs=68.6
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEE-ecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEE
Q 027585 95 LGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFF-TTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFT 173 (221)
Q Consensus 95 ~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~-~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 173 (221)
..+.+..+.++||...|+|.|+. +|+.||++|++++.++ ++ .+.+++||++++|+|.+|..+ .+++|+.++.
T Consensus 130 ~~l~lG~v~l~PG~~yP~HsHp~-EEiy~VLsG~~e~~v~~g~-----~~~l~pGd~v~ipsgv~Ha~r-t~dePllalw 202 (217)
T 4b29_A 130 QSLRVTVGYWGPGLDYGWHEHLP-EELYSVVSGRALFHLRNAP-----DLMLEPGQTRFHPANAPHAMT-TLTDPILTLV 202 (217)
T ss_dssp SSCEEEEEEECSSCEEEEEECSS-EEEEEEEEECEEEEETTSC-----CEEECTTCEEEECTTCCEEEE-CCSSCEEEEE
T ss_pred CeEEEEEEEECCCCcCCCCCCCC-ceEEEEEeCCEEEEECCCC-----EEecCCCCEEEcCCCCceeEE-ECCccEEEEE
Confidence 35889999999999999999996 9999999999999998 44 899999999999999999998 4889998888
Q ss_pred EEcC
Q 027585 174 AFNS 177 (221)
Q Consensus 174 ~~~s 177 (221)
+...
T Consensus 203 vW~G 206 (217)
T 4b29_A 203 LWRG 206 (217)
T ss_dssp EEES
T ss_pred EEeC
Confidence 7754
No 93
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.07 E-value=1.4e-09 Score=98.65 Aligned_cols=92 Identities=20% Similarity=0.132 Sum_probs=75.6
Q ss_pred CeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCC
Q 027585 78 GSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGL 157 (221)
Q Consensus 78 g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~ 157 (221)
+..+...+... .+-....+.+....++||+..++|.|.. .|++||++|++++.++++ ++.+++||++++|+|.
T Consensus 276 ~~~l~l~nP~~-g~~~~~tl~~~~~~l~PG~~~~~HrH~~-~~v~~VleG~G~~~V~ge-----~~~~~~GD~~~iP~g~ 348 (394)
T 3bu7_A 276 GLILRYTNPQT-GGHPMLTMGASMQMLRPGEHTKAHRHTG-NVIYNVAKGQGYSIVGGK-----RFDWSEHDIFCVPAWT 348 (394)
T ss_dssp BEEEEECCTTT-SSCSSSSCEEEEEEECTTCBCCCEEESS-CEEEEEEECCEEEEETTE-----EEEECTTCEEEECTTC
T ss_pred ceEEEEeCCCC-CCCCCCeeeEEEEEECCCCcCCCcccCC-cEEEEEEeCeEEEEECCE-----EEEEeCCCEEEECCCC
Confidence 44455555432 2222334778889999999999999996 799999999999998776 9999999999999999
Q ss_pred eEEEEecC-CccEEEEEEEc
Q 027585 158 IHFQQNVG-EGKALAFTAFN 176 (221)
Q Consensus 158 ~H~~~N~g-~~~a~~l~~~~ 176 (221)
.|.+.|.| +++++++++.+
T Consensus 349 ~H~~~N~g~~e~~~ll~i~D 368 (394)
T 3bu7_A 349 WHEHCNTQERDDACLFSFND 368 (394)
T ss_dssp CEEEEECCSSCCEEEEEEES
T ss_pred eEEeEeCCCCCCeEEEEeeC
Confidence 99999998 79999888854
No 94
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.04 E-value=8.1e-10 Score=100.19 Aligned_cols=77 Identities=13% Similarity=0.078 Sum_probs=69.3
Q ss_pred ccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEE-EEEecCCeEEEEEecCCcEEEECCCCeEEEEe-cCCccEEE
Q 027585 94 TLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLV-GFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQN-VGEGKALA 171 (221)
Q Consensus 94 ~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v-~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N-~g~~~a~~ 171 (221)
+..+.+....+.||+..++|.|.. .|+.||++|++.+ .++++ ++.+++||++++|+|..|...| .|++++++
T Consensus 120 t~~L~a~~~~l~PG~~~~~HrH~~-~ev~~IleG~G~~t~v~G~-----~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~ 193 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGAHRHAA-SALRFIMEGSGAYTIVDGH-----KVELGANDFVLTPNGTWHEHGILESGTECIW 193 (394)
T ss_dssp BTTBEEEEEEECTTCBCCCEEESS-CEEEEEEECSCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECTTCCCEEE
T ss_pred CCeeEEEEEEECCCCCcCCccCCc-ceEEEEEEeeEEEEEECCE-----EEEEcCCCEEEECcCCCEEEEcCCCCCCEEE
Confidence 446888999999999999999987 7999999999976 55554 8999999999999999999999 99999999
Q ss_pred EEEEc
Q 027585 172 FTAFN 176 (221)
Q Consensus 172 l~~~~ 176 (221)
+++.+
T Consensus 194 l~v~d 198 (394)
T 3bu7_A 194 QDGLD 198 (394)
T ss_dssp EEEEC
T ss_pred EEccc
Confidence 98764
No 95
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=99.03 E-value=2.8e-09 Score=87.71 Aligned_cols=84 Identities=17% Similarity=0.218 Sum_probs=69.2
Q ss_pred EEEEEEEcCCCc----------CCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCc
Q 027585 98 SMNRVDFAPGGL----------NPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEG 167 (221)
Q Consensus 98 s~~~v~l~Pgg~----------~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~ 167 (221)
+...+.+.|+.. .++|+|+. .|+.||++|++.+.+.+.+++.+...+++||++++|+|+.|++.+..+.
T Consensus 75 ~~D~v~~~p~~~p~~~~k~~~~~~~H~H~~-~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~~ 153 (191)
T 1vr3_A 75 WMDIITICKDTLPNYEEKIKMFFEEHLHLD-EEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKN 153 (191)
T ss_dssp EEEEEEESTTTSTTHHHHHHHHHSCEECSS-CEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTC
T ss_pred ceeEEEECCCcCcchhhhhccCCcceECCc-ceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCCC
Confidence 455566777752 38999998 9999999999999999865666678999999999999999999987777
Q ss_pred cEEEEEEEcCCCCeee
Q 027585 168 KALAFTAFNSHLPGAV 183 (221)
Q Consensus 168 ~a~~l~~~~s~~pg~~ 183 (221)
....+-+|..+ |+..
T Consensus 154 ~~~airlF~~~-~~W~ 168 (191)
T 1vr3_A 154 YVKAMRLFVGE-PVWT 168 (191)
T ss_dssp CEEEEEEESSS-CCCC
T ss_pred CEEEEEEECCC-CCcc
Confidence 78888888644 5544
No 96
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=99.03 E-value=3.5e-10 Score=101.68 Aligned_cols=77 Identities=14% Similarity=0.166 Sum_probs=69.9
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEE-EEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEE
Q 027585 95 LGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLL-VGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFT 173 (221)
Q Consensus 95 ~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~-v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 173 (221)
..+.+....+.||+..++|.|.. +|+.||++|++. +.++++ +..+++||++++|+|..|...|.|+++++++.
T Consensus 101 ~~L~a~~~~l~PG~~~~~HrH~~-~ev~~VleG~G~~~~vdG~-----~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l~ 174 (368)
T 3nw4_A 101 PTMWAAIQYLGPRETAPEHRHSQ-NAFRFVVEGEGVWTVVNGD-----PVRMSRGDLLLTPGWCFHGHMNDTDQPMAWID 174 (368)
T ss_dssp SSCEEEEEEECTTCEEEEEEESS-CEEEECSSCEEEEEEETTE-----EEEEETTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred CceEEEEEEECCCCccCceeccc-ceEEEEEecceEEEEECCE-----EEEEeCCCEEEECCCCcEEeEeCCCCCeEEEE
Confidence 45889999999999999999986 899999999995 666665 99999999999999999999999999999999
Q ss_pred EEcC
Q 027585 174 AFNS 177 (221)
Q Consensus 174 ~~~s 177 (221)
+.+.
T Consensus 175 v~D~ 178 (368)
T 3nw4_A 175 GLDI 178 (368)
T ss_dssp EECH
T ss_pred ecch
Confidence 8753
No 97
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.99 E-value=6e-10 Score=82.58 Aligned_cols=62 Identities=15% Similarity=0.126 Sum_probs=51.2
Q ss_pred EEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEE-ecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEE
Q 027585 101 RVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFF-TTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKAL 170 (221)
Q Consensus 101 ~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~-~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~ 170 (221)
.....||.. ++| |+. .|++||++|++++.++ ++ .+.|++||+++||+|.+|.+.|.++....
T Consensus 35 ~~~~~pg~~-~~h-H~~-~E~~~Vl~G~~~~~i~~g~-----~~~l~~GD~i~ip~g~~H~~~n~~~~~~~ 97 (101)
T 1o5u_A 35 IWEKEVSEF-DWY-YDT-NETCYILEGKVEVTTEDGK-----KYVIEKGDLVTFPKGLRCRWKVLEPVRKH 97 (101)
T ss_dssp EEEECSEEE-EEE-CSS-CEEEEEEEEEEEEEETTCC-----EEEEETTCEEEECTTCEEEEEEEEEEEEE
T ss_pred EEEeCCCcc-ccc-CCc-eEEEEEEeCEEEEEECCCC-----EEEECCCCEEEECCCCcEEEEeCCCeeEE
Confidence 456777753 356 665 9999999999999997 66 89999999999999999999997664433
No 98
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.97 E-value=1.8e-09 Score=91.63 Aligned_cols=71 Identities=13% Similarity=0.107 Sum_probs=63.9
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
.+.+.+++++||+....|+ .+|++||++|++++.++++ ++.|++||+++||++.+|.++|. ++++++++.
T Consensus 49 ~~~~~~~~l~Pg~~~~~~~---~ee~~~Vl~G~~~~~~~~~-----~~~l~~Gd~~~~p~~~~H~~~n~--~~~~~l~v~ 118 (246)
T 1sfn_A 49 RFVQFTAEMPAGAQATESV---YQRFAFVLSGEVDVAVGGE-----TRTLREYDYVYLPAGEKHMLTAK--TDARVSVFE 118 (246)
T ss_dssp SSEEEEEEECTTCEEECCS---SEEEEEEEEEEEEEECSSC-----EEEECTTEEEEECTTCCCEEEEE--EEEEEEEEE
T ss_pred cEEEEEEEECCCCcCCCCc---eeEEEEEEECEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeC--CCEEEEEEE
Confidence 5788999999999877775 5999999999999999887 99999999999999999999998 788888876
Q ss_pred c
Q 027585 176 N 176 (221)
Q Consensus 176 ~ 176 (221)
.
T Consensus 119 ~ 119 (246)
T 1sfn_A 119 K 119 (246)
T ss_dssp E
T ss_pred e
Confidence 3
No 99
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.92 E-value=1.5e-09 Score=83.20 Aligned_cols=66 Identities=17% Similarity=0.172 Sum_probs=55.0
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEE-EecCCeEEEEEecCCcEEEECCCCeEEEEecCCcc
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGF-FTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGK 168 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~-~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~ 168 (221)
.+++...+..||... +|+|.. +|++||++|++++.+ +++ .+.|++||++++|+|..|.+.|.++..
T Consensus 48 ~~~~g~w~~~pG~~~-~~~~~~-~E~~~Vl~G~~~l~~~~g~-----~~~l~~GD~~~ip~g~~h~~~~~~~~r 114 (123)
T 3bcw_A 48 KVESGVWESTSGSFQ-SNTTGY-IEYCHIIEGEARLVDPDGT-----VHAVKAGDAFIMPEGYTGRWEVDRHVK 114 (123)
T ss_dssp TEEEEEEEEEEEEEE-CCCTTE-EEEEEEEEEEEEEECTTCC-----EEEEETTCEEEECTTCCCEEEEEEEEE
T ss_pred CEEEEEEEECCCcee-eEcCCC-cEEEEEEEEEEEEEECCCe-----EEEECCCCEEEECCCCeEEEEECCcee
Confidence 367888888898654 577754 899999999999998 444 799999999999999999999975543
No 100
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.86 E-value=7e-09 Score=85.41 Aligned_cols=70 Identities=17% Similarity=0.215 Sum_probs=61.8
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEEc
Q 027585 97 ISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFN 176 (221)
Q Consensus 97 is~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~ 176 (221)
..+..+.++||+..+.|+|++ .|+.||++|+.. ++ ...+.+||.+++|+|..|...+.+++.++++.+.+
T Consensus 125 ~~v~l~~~~pG~~~p~H~H~g-~E~~~VL~G~f~----de-----~~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~~~d 194 (195)
T 2q1z_B 125 AIARLLWIPGGQAVPDHGHRG-LELTLVLQGAFR----DE-----TDRFGAGDIEIADQELEHTPVAERGLDCICLAATD 194 (195)
T ss_dssp SEEEEEEECTTCBCCCCCCSS-CEEEEEEESEEE----CS-----SSEEETTCEEEECSSCCCCCEECSSSCEEEEEEEC
T ss_pred cEEEEEEECCCCCCCCcCCCC-eEEEEEEEEEEE----CC-----cEEECCCeEEEeCcCCccCCEeCCCCCEEEEEEec
Confidence 356789999999999999987 899999999955 55 56899999999999999999998788999888764
No 101
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=98.82 E-value=8.5e-09 Score=82.45 Aligned_cols=75 Identities=16% Similarity=0.182 Sum_probs=63.6
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEec--CCccEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNV--GEGKALAFT 173 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~--g~~~a~~l~ 173 (221)
+..+.+++++||+..+.|+|++ .|.+||++|+.++. ++ ...+++||.++.|+|..|...+. ++++++++.
T Consensus 41 g~~v~lvr~~pG~~~p~H~H~g-~ee~~VL~G~~~~~---e~----~~~~~~Gd~~~~P~g~~H~~~~~~~~~e~~~~~~ 112 (159)
T 3ebr_A 41 GETITLLKAPAGMEMPRHHHTG-TVIVYTVQGSWRYK---EH----DWVAHAGSVVYETASTRHTPQSAYAEGPDIITFN 112 (159)
T ss_dssp TEEEEEEEECSSCBCCCEEESS-CEEEEEEESCEEET---TS----SCCBCTTCEEEECSSEEECEEESSSSSSCEEEEE
T ss_pred CeEEEEEEECCCCCcccccCCC-CEEEEEEEeEEEEe---CC----CeEECCCeEEEECCCCcceeEeCCCCCCCEEEEE
Confidence 4567889999999999999998 88899999998752 22 24899999999999999999998 778998888
Q ss_pred EEcCC
Q 027585 174 AFNSH 178 (221)
Q Consensus 174 ~~~s~ 178 (221)
+.+.+
T Consensus 113 ~~~G~ 117 (159)
T 3ebr_A 113 IVAGE 117 (159)
T ss_dssp EEESC
T ss_pred EecCc
Confidence 65544
No 102
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.82 E-value=2.4e-08 Score=89.00 Aligned_cols=75 Identities=15% Similarity=0.168 Sum_probs=64.4
Q ss_pred ceEEEEEEEcCC---CcCCCCCCCCCcEEEEEEeCEEEEEEEe-cCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEE
Q 027585 96 GISMNRVDFAPG---GLNPPHSHPRASESGIVIKGKLLVGFFT-TNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALA 171 (221)
Q Consensus 96 gis~~~v~l~Pg---g~~~~H~Hp~a~Ei~yVl~G~~~v~~~~-~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~ 171 (221)
.+++..+++.++ +..+.|.|+. +|++||++|++++++++ + .+.|++||++++|+|.+|.+.|.++. +.+
T Consensus 248 ~f~~~~i~~~~~~~g~~~~~h~~~~-~~~~~vleG~~~i~i~g~~-----~~~l~~Gd~~~iPag~~h~~~~~~~~-~~~ 320 (350)
T 1juh_A 248 NYTLSTISMSTTPSTVTVPTWSFPG-ACAFQVQEGRVVVQIGDYA-----ATELGSGDVAFIPGGVEFKYYSEAYF-SKV 320 (350)
T ss_dssp CEEEEEEEECCCCTTSCCCCBCCSS-CEEEEEEESCEEEEETTSC-----CEEECTTCEEEECTTCCEEEEESSSS-EEE
T ss_pred EEEEEEEeeccccCCCCCCcccCCC-cEEEEEEeeEEEEEECCeE-----EEEeCCCCEEEECCCCCEEEEecCCe-EEE
Confidence 478888888884 4678898987 99999999999999988 6 89999999999999999999998654 677
Q ss_pred EEEEcC
Q 027585 172 FTAFNS 177 (221)
Q Consensus 172 l~~~~s 177 (221)
+.+.+.
T Consensus 321 l~~~~g 326 (350)
T 1juh_A 321 LFVSSG 326 (350)
T ss_dssp EEEEES
T ss_pred EEEecC
Confidence 766654
No 103
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.79 E-value=3.1e-09 Score=83.47 Aligned_cols=77 Identities=16% Similarity=-0.027 Sum_probs=60.5
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEE-EEecCCccEEEEEEE
Q 027585 97 ISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHF-QQNVGEGKALAFTAF 175 (221)
Q Consensus 97 is~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~-~~N~g~~~a~~l~~~ 175 (221)
-.+.+++++||+..+.|+|++ .|.+||++|+++...++. ...+++++||.+++|+|..|. ..+ .+.++++.++
T Consensus 44 ~~~~~~~~~pG~~~p~H~H~~-~ee~~VL~G~~~~~~g~~---~~~~~~~~Gd~~~~p~g~~H~p~~~--~e~~~~l~~~ 117 (145)
T 2o1q_A 44 SWTAIFDCPAGSSFAAHVHVG-PGEYFLTKGKMDVRGGKA---AGGDTAIAPGYGYESANARHDKTEF--PVASEFYMSF 117 (145)
T ss_dssp EEEEEEEECTTEEECCEEESS-CEEEEEEEEEEEETTCGG---GTSEEEESSEEEEECTTCEESCCEE--EEEEEEEEEE
T ss_pred cEEEEEEECCCCCCCccCCCC-CEEEEEEEeEEEEcCCCE---ecceEeCCCEEEEECcCCccCCeEC--CCCeEEEEEE
Confidence 357789999999999999997 677999999999653332 013799999999999999999 443 4557777777
Q ss_pred cCCC
Q 027585 176 NSHL 179 (221)
Q Consensus 176 ~s~~ 179 (221)
+.+.
T Consensus 118 ~gp~ 121 (145)
T 2o1q_A 118 LGPL 121 (145)
T ss_dssp ESCE
T ss_pred CCcc
Confidence 6554
No 104
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.79 E-value=4.1e-09 Score=85.94 Aligned_cols=71 Identities=15% Similarity=0.259 Sum_probs=57.9
Q ss_pred CCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEEcCCCCeee
Q 027585 110 NPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFNSHLPGAV 183 (221)
Q Consensus 110 ~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~ 183 (221)
.++|+|+. .|+.||++|++++.+. .+++.+...+++||++++|+|+.|++.+..+.....+-+|..+ |+..
T Consensus 93 ~~~H~H~~-~Ei~~Vl~G~g~~~i~-~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~-~~w~ 163 (179)
T 1zrr_A 93 LNEHTHGE-DEVRFFVEGAGLFCLH-IGDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNP-EGWI 163 (179)
T ss_dssp HSCBEESS-CEEEEEEESCCCCCEE-CSSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCG-GGEE
T ss_pred ccceECCh-heEEEEEcceEEEEEE-eCCEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCC-CCcc
Confidence 57999997 9999999999999886 2355556779999999999999999988766667777777654 5543
No 105
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.77 E-value=1.9e-08 Score=81.65 Aligned_cols=80 Identities=25% Similarity=0.330 Sum_probs=62.6
Q ss_pred eEEEEEEEcCCCcCCCCCCCC------CcEEEEEEeCEEEEEEEecCCe----------------EEEEEecCCcEEEEC
Q 027585 97 ISMNRVDFAPGGLNPPHSHPR------ASESGIVIKGKLLVGFFTTNNV----------------FYSKVLSAGEMFVIP 154 (221)
Q Consensus 97 is~~~v~l~Pgg~~~~H~Hp~------a~Ei~yVl~G~~~v~~~~~~~~----------------~~~~~L~~GDv~~~P 154 (221)
....++.+.||+..|.|.|+. -.|-++|++|.+++.+.++.-. -....|++||++.+|
T Consensus 53 Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIp 132 (175)
T 2y0o_A 53 YCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIP 132 (175)
T ss_dssp EEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEEC
T ss_pred ceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEEC
Confidence 567888999999999999998 8999999999999988653100 024699999999999
Q ss_pred CCCeEEEEecCCccEEEEEEEcCC
Q 027585 155 RGLIHFQQNVGEGKALAFTAFNSH 178 (221)
Q Consensus 155 ~g~~H~~~N~g~~~a~~l~~~~s~ 178 (221)
+|..|+++| +.+.+. +.-+++.
T Consensus 133 pg~~H~f~a-geegvl-i~EvSt~ 154 (175)
T 2y0o_A 133 PNTKHWFQA-GEEGAV-VTEMSST 154 (175)
T ss_dssp TTCCEEEEE-EEEEEE-EEEEEEC
T ss_pred CCCcEEEEe-CCCCEE-EEEEeCC
Confidence 999999999 444444 4444433
No 106
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=98.74 E-value=8.5e-08 Score=70.06 Aligned_cols=73 Identities=16% Similarity=0.212 Sum_probs=62.8
Q ss_pred EEEEecCCcEEEECCCCeEEEEecCCccEEEEEEEcCC-CCeeeeccc---hhhcCCCCCCHHHHHhhcCCCHHHHHHHH
Q 027585 141 YSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFNSH-LPGAVIVPT---TLFASTPSVPNQVLTKTFQVDDDLISTIK 216 (221)
Q Consensus 141 ~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~-~pg~~~~~~---~lf~~~p~~~~~vla~~f~l~~~~v~~l~ 216 (221)
....|++||+++||+|.+-...+.. ...++++-++. ++....++. +++.. ||.++++.+|+++.+++++|+
T Consensus 6 ~~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tna~~~~~~~LAG~~~Svl~~---l~~evla~aF~~s~ee~~~l~ 80 (93)
T 1dgw_Y 6 YAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVNAENNERNFLAGHKENVIRQ---IPRQVSDLTFPGSGEEVEELL 80 (93)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSTTBSTTT---SCHHHHHHHSSSCTHHHHHHT
T ss_pred hhceecCCcEEEECCCCceeEEecC--CeEEEEEEecCCCCeeeeccCCcccHHHh---CCHHHHHHHcCCCHHHHHHHH
Confidence 4678999999999999999999964 49999985555 888888864 88886 999999999999999999997
Q ss_pred hh
Q 027585 217 SK 218 (221)
Q Consensus 217 ~~ 218 (221)
..
T Consensus 81 ~~ 82 (93)
T 1dgw_Y 81 EN 82 (93)
T ss_dssp TS
T ss_pred hc
Confidence 54
No 107
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.73 E-value=8.3e-08 Score=77.38 Aligned_cols=61 Identities=18% Similarity=0.239 Sum_probs=52.9
Q ss_pred EEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecC
Q 027585 103 DFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVG 165 (221)
Q Consensus 103 ~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g 165 (221)
.-.|++...+|.|+. +|++||++|++++.+.+. |+.....|++||++++|+|++|+-...+
T Consensus 41 v~Gpn~r~d~H~h~~-dE~FyvlkG~m~i~v~d~-g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 41 VGGPNHRTDYHDDPL-EEFFYQLRGNAYLNLWVD-GRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp ECSCBCCCCEEECSS-CEEEEEEESCEEEEEEET-TEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred EcCCCcCccCcCCCC-ceEEEEEeeEEEEEEEcC-CceeeEEECCCCEEEeCCCCCcCccccC
Confidence 346788899998865 999999999999999873 5556899999999999999999987754
No 108
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=98.73 E-value=1.9e-08 Score=80.94 Aligned_cols=75 Identities=25% Similarity=0.306 Sum_probs=61.1
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecC--CccEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVG--EGKALAFT 173 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g--~~~a~~l~ 173 (221)
+..+.+++++||+..++|+|++ .|.+|||+|++... ..+ .+.+++||.++.|+|..|...+.. +++++.+.
T Consensus 42 g~~v~lvr~~pG~~~p~H~H~g-~ee~~VL~G~f~~~---~~~---~~~~~aGd~~~~P~g~~H~~~a~~~~~~gci~l~ 114 (165)
T 3cjx_A 42 GLMVMRASFAPGLTLPLHFHTG-TVHMYTISGCWYYT---EYP---GQKQTAGCYLYEPGGSIHQFNTPRDNEGQTEVIF 114 (165)
T ss_dssp TEEEEEEEECTTCBCCEEEESS-CEEEEEEESEEEET---TCT---TSCEETTEEEEECTTCEECEECCTTCSSCEEEEE
T ss_pred CcEEEEEEECCCCcCCcccCCC-CEEEEEEEEEEEEC---CCc---eEEECCCeEEEeCCCCceeeEeCCCCCCCcEEEE
Confidence 4567889999999999999998 99999999999863 211 367899999999999999998864 34787777
Q ss_pred EEcC
Q 027585 174 AFNS 177 (221)
Q Consensus 174 ~~~s 177 (221)
+...
T Consensus 115 v~~G 118 (165)
T 3cjx_A 115 MLSG 118 (165)
T ss_dssp EEES
T ss_pred EEec
Confidence 6553
No 109
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.71 E-value=2e-07 Score=75.35 Aligned_cols=86 Identities=20% Similarity=0.385 Sum_probs=73.6
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEec-CCe---EEEEEecCCcEEEECCCCeEEEEecCCccEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTT-NNV---FYSKVLSAGEMFVIPRGLIHFQQNVGEGKALA 171 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~-~~~---~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~ 171 (221)
++++..+...||...++|-|.++..++.|++|+++..+... +++ ..+..+.+||++++|++.+|++.|.++++++-
T Consensus 68 ~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aVS 147 (171)
T 3eqe_A 68 ELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMVS 147 (171)
T ss_dssp SCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEEE
T ss_pred CeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEEE
Confidence 46789999999999999999988899999999999876432 231 23678999999999999999999999999999
Q ss_pred EEEEcCCCCe
Q 027585 172 FTAFNSHLPG 181 (221)
Q Consensus 172 l~~~~s~~pg 181 (221)
+-+++.+..+
T Consensus 148 lHvY~pp~~~ 157 (171)
T 3eqe_A 148 LHVYSPPLED 157 (171)
T ss_dssp EEEEESCCCC
T ss_pred EEEeCCCccc
Confidence 9999877653
No 110
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.59 E-value=4.1e-07 Score=70.55 Aligned_cols=61 Identities=18% Similarity=0.174 Sum_probs=52.2
Q ss_pred CCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCC-ccEEEEEEEcC
Q 027585 111 PPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGE-GKALAFTAFNS 177 (221)
Q Consensus 111 ~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~-~~a~~l~~~~s 177 (221)
.+|.|+. -|++||++|++++.++++ .+.+++||++++|+|.+|.+.+.++ ++...+++.-+
T Consensus 32 ~p~~h~~-~~i~~v~~G~~~~~i~~~-----~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i~f~ 93 (164)
T 2arc_A 32 RPLGMKG-YILNLTIRGQGVVKNQGR-----EFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFR 93 (164)
T ss_dssp ETTCCSS-EEEEEEEEECEEEEETTE-----EEEECTTCEEEECTTCCEEEEECTTSSEEEEEEEEEC
T ss_pred cccCCCc-eEEEEEEEeEEEEEECCE-----EEEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEEEEC
Confidence 4788986 999999999999999887 9999999999999999999998763 66666665433
No 111
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.58 E-value=1.2e-07 Score=73.80 Aligned_cols=69 Identities=12% Similarity=0.131 Sum_probs=54.3
Q ss_pred CCCcCCCCCCCCCcEEEEEEeCEEEEEEEecC---CeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEEc
Q 027585 106 PGGLNPPHSHPRASESGIVIKGKLLVGFFTTN---NVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFN 176 (221)
Q Consensus 106 Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~---~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~ 176 (221)
+++...+|.|++.+|+++|++|++++.+.+.. .+-....|++|+++++|+|+.|..... +.++++.+=.
T Consensus 38 ~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~--~e~~vLLiEp 109 (140)
T 3d0j_A 38 IEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQ--KDTKMMYVQD 109 (140)
T ss_dssp TTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEEC--TTCEEEEEEE
T ss_pred cccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCC--CceEEEEEEe
Confidence 34567889999999999999999999998531 122378999999999999999999874 4455555443
No 112
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.53 E-value=4e-07 Score=81.80 Aligned_cols=89 Identities=19% Similarity=0.109 Sum_probs=71.2
Q ss_pred Cee-EEEeeccc-cCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECC
Q 027585 78 GSA-VTPANVLA-FPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPR 155 (221)
Q Consensus 78 g~~-v~~~~~~~-fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~ 155 (221)
|.. +...+... -+...+ |.+....+.||...++|.|.. +++++|++|++++.++++ ++..++||+|++|+
T Consensus 260 g~~~~~y~NP~tg~~~~pt--i~~~~~~L~pG~~t~~hRht~-s~Vy~V~eG~G~~~I~~~-----~~~w~~gD~fvvP~ 331 (368)
T 3nw4_A 260 GHAAIRYVNPTTGGDVMPT--LRCEFHRLRAGTETATRNEVG-STVFQVFEGAGAVVMNGE-----TTKLEKGDMFVVPS 331 (368)
T ss_dssp TEEEEECBCTTTSSBSSSS--CEEEEEEECTTCBCCCEEESS-CEEEEEEESCEEEEETTE-----EEEECTTCEEEECT
T ss_pred ceEEEEEeCCCCCCCcchh--HHhheEEECCCCccCCeeccc-cEEEEEEeCcEEEEECCE-----EEEecCCCEEEECC
Confidence 555 55555332 223343 567778899999999999986 899999999999999887 99999999999999
Q ss_pred CCeEEEEecCCccEEEEEEEc
Q 027585 156 GLIHFQQNVGEGKALAFTAFN 176 (221)
Q Consensus 156 g~~H~~~N~g~~~a~~l~~~~ 176 (221)
+..|...|. +++.++++-+
T Consensus 332 w~~h~~~n~--~~a~Lf~~~D 350 (368)
T 3nw4_A 332 WVPWSLQAE--TQFDLFRFSD 350 (368)
T ss_dssp TCCEEEEES--SSEEEEEEES
T ss_pred CCcEEEEeC--CCEEEEEEeC
Confidence 999999996 5777776543
No 113
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=98.51 E-value=5e-07 Score=79.49 Aligned_cols=84 Identities=23% Similarity=0.291 Sum_probs=67.1
Q ss_pred EEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecC-CeEEEEEecC-C---cEEEECCCCeEEEEecCCccEEEE
Q 027585 98 SMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTN-NVFYSKVLSA-G---EMFVIPRGLIHFQQNVGEGKALAF 172 (221)
Q Consensus 98 s~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~-~~~~~~~L~~-G---Dv~~~P~g~~H~~~N~g~~~a~~l 172 (221)
.....+..||....+|||....|.++|++|++.+.+.+.. ++ .+.++. | +.+++|+|..|.+.|.|+++++++
T Consensus 273 q~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~ 350 (369)
T 3st7_A 273 QVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDE--IIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTI 350 (369)
T ss_dssp EEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCCC--CEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEE
T ss_pred eEEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCCCc--EEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEE
Confidence 3455678999999999999889999999999999887543 45 445555 6 999999999999999998999888
Q ss_pred EEE----cCCCCeee
Q 027585 173 TAF----NSHLPGAV 183 (221)
Q Consensus 173 ~~~----~s~~pg~~ 183 (221)
... +.++|.++
T Consensus 351 ~~~~~~y~~~~~d~~ 365 (369)
T 3st7_A 351 MWVNEMFDPNQPDTY 365 (369)
T ss_dssp EEESSCCCSSSCCCE
T ss_pred EecCcccCCCCCccc
Confidence 754 34445544
No 114
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=98.48 E-value=1.3e-06 Score=72.66 Aligned_cols=83 Identities=17% Similarity=0.237 Sum_probs=70.0
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEec--CCeE----EEEEecCCcEEEECC--CCeEEEEec-CC
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTT--NNVF----YSKVLSAGEMFVIPR--GLIHFQQNV-GE 166 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~--~~~~----~~~~L~~GDv~~~P~--g~~H~~~N~-g~ 166 (221)
.+++..+...||...++|-|.. ..+++|++|+++..+-.. +|+. .+.++++||+.+++. |.+|.+.|. ++
T Consensus 78 ~~~v~~l~w~PGq~spiHdH~~-~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~ 156 (208)
T 2gm6_A 78 RFSIVSFVWGPGQRTPIHDHTV-WGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDD 156 (208)
T ss_dssp SCEEEEEEECTTCBCCSBCCSS-CEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEeCCCcccCcccCCc-ceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCC
Confidence 3678899999999999999997 999999999998876432 2321 268999999999999 999999998 78
Q ss_pred ccEEEEEEEcCCC
Q 027585 167 GKALAFTAFNSHL 179 (221)
Q Consensus 167 ~~a~~l~~~~s~~ 179 (221)
++++.|-+|....
T Consensus 157 ~~avsLHvY~~~~ 169 (208)
T 2gm6_A 157 RVSISIHVYGANI 169 (208)
T ss_dssp SCEEEEEEESSCG
T ss_pred CcEEEEEEEcCCC
Confidence 8999999886543
No 115
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.46 E-value=1.3e-06 Score=70.30 Aligned_cols=60 Identities=18% Similarity=0.293 Sum_probs=50.9
Q ss_pred EEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCC----eEEEEEecCCcEEEECCCCeEEEEec
Q 027585 103 DFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNN----VFYSKVLSAGEMFVIPRGLIHFQQNV 164 (221)
Q Consensus 103 ~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~----~~~~~~L~~GDv~~~P~g~~H~~~N~ 164 (221)
.-.|+....+|.|+ .+|++|+++|++.+.+.++ | +.....|++||++++|+|++|+-...
T Consensus 40 vgGPn~r~D~H~~~-~eE~Fy~lkG~m~l~v~d~-g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~ 103 (176)
T 1zvf_A 40 VGGPNERTDYHINP-TPEWFYQKKGSMLLKVVDE-TDAEPKFIDIIINEGDSYLLPGNVPHSPVRF 103 (176)
T ss_dssp ECSSBCCSCEEECS-SCEEEEEEESCEEEEEEEC-SSSSCEEEEEEECTTEEEEECTTCCEEEEEC
T ss_pred EcCCCcCCcCcCCC-CceEEEEEeCEEEEEEEcC-CCcccceeeEEECCCCEEEcCCCCCcCCccc
Confidence 34566789999555 5999999999999999984 4 45689999999999999999998664
No 116
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.41 E-value=8.4e-07 Score=74.50 Aligned_cols=72 Identities=21% Similarity=0.236 Sum_probs=60.3
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
+.....++++||...++|+|++ .|.+||++|++. ++ ...+.+||.++.|+|..|.... ++.|.++...
T Consensus 42 g~~~~lvr~~pG~~~p~H~H~g-~Ee~~VL~G~f~----d~-----~~~~~~Gd~~~~P~g~~H~p~a--~~gc~~~vk~ 109 (223)
T 3o14_A 42 ARATSIVRYAPGSRFSAHTHDG-GEEFIVLDGVFQ----DE-----HGDYPAGTYVRNPPTTSHVPGS--AEGCTIFVKL 109 (223)
T ss_dssp CEEEEEEEECTTEECCCEECTT-CEEEEEEEEEEE----ET-----TEEEETTEEEEECTTCEECCEE--SSCEEEEEEE
T ss_pred ccEEEEEEECCCCCcccccCCC-CEEEEEEEeEEE----EC-----CeEECCCeEEEeCCCCccccEe--CCCCEEEEEe
Confidence 3456788999999999999997 899999999976 34 5689999999999999998876 5678888877
Q ss_pred cCCC
Q 027585 176 NSHL 179 (221)
Q Consensus 176 ~s~~ 179 (221)
..=.
T Consensus 110 ~~~~ 113 (223)
T 3o14_A 110 WQFD 113 (223)
T ss_dssp SCSC
T ss_pred cCCC
Confidence 5433
No 117
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.34 E-value=2.8e-06 Score=73.24 Aligned_cols=67 Identities=16% Similarity=0.302 Sum_probs=55.6
Q ss_pred cCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 105 APGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 105 ~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
.|+....+| |+..+|++|+++|.+++.+.+ +|+.....+++||++++|+|++|.-.... .++.+.+=
T Consensus 39 GpN~R~d~H-~~~~dE~FyqlkG~m~l~~~d-~g~~~~V~i~eGemfllP~gv~HsP~r~~--et~gLviE 105 (286)
T 2qnk_A 39 GPNTRKDYH-IEEGEEVFYQLEGDMVLRVLE-QGKHRDVVIRQGEIFLLPARVPHSPQRFA--NTVGLVVE 105 (286)
T ss_dssp SCBCCCCEE-ECSSCEEEEEEESCEEEEEEE-TTEEEEEEECTTEEEEECTTCCEEEEECT--TCEEEEEE
T ss_pred CCCcCccCc-CCCCCeEEEEEeCeEEEEEEe-CCceeeEEECCCeEEEeCCCCCcCCcccC--CeEEEEEe
Confidence 466678999 998999999999999999998 46667899999999999999999998744 34444443
No 118
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=98.33 E-value=1.2e-05 Score=66.46 Aligned_cols=86 Identities=14% Similarity=0.148 Sum_probs=72.6
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEec--CC-----eEEEEEecCCcEEEE-CCCCeEEEEecC-Cc
Q 027585 97 ISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTT--NN-----VFYSKVLSAGEMFVI-PRGLIHFQQNVG-EG 167 (221)
Q Consensus 97 is~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~--~~-----~~~~~~L~~GDv~~~-P~g~~H~~~N~g-~~ 167 (221)
+++..+...||...++|-|.++..+++|++|+++...-+. ++ ...+.++++||+.++ |++.+|.+.|.+ ++
T Consensus 70 ~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~~ 149 (200)
T 3eln_A 70 FNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHTE 149 (200)
T ss_dssp CEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSSC
T ss_pred eEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCCC
Confidence 6788899999999999999988999999999999886432 11 123689999999999 888899999998 78
Q ss_pred cEEEEEEEcCCCCee
Q 027585 168 KALAFTAFNSHLPGA 182 (221)
Q Consensus 168 ~a~~l~~~~s~~pg~ 182 (221)
+++-|=+|..+..+.
T Consensus 150 ~avSlHvY~pp~~~~ 164 (200)
T 3eln_A 150 PAVSLHLYSPPFDTC 164 (200)
T ss_dssp CEEEEEEEESCCSEE
T ss_pred CEEEEEeCCCCccce
Confidence 999999998776653
No 119
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=98.30 E-value=7.4e-07 Score=70.76 Aligned_cols=93 Identities=14% Similarity=-0.009 Sum_probs=66.4
Q ss_pred cCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECC
Q 027585 76 IFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPR 155 (221)
Q Consensus 76 ~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~ 155 (221)
..|..++.+... | ..|-...+++++||+..++|+|++ .|.+|||+|+.....++. .....+++|+.++.|+
T Consensus 30 ~~Gv~~k~L~~~--~---e~g~~t~lvr~~pG~~~p~H~H~g-~ee~~VL~G~~~~~~Gd~---~~~~~~~aGsYv~ePp 100 (153)
T 3bal_A 30 DGGITWQLLHSS--P---ETSSWTAIFNCPAGSSFASHIHAG-PGEYFLTKGKMEVRGGEQ---EGGSTAYAPSYGFESS 100 (153)
T ss_dssp ESCCEEEEEEEE--T---TTTEEEEEEEECTTEEECCEEESS-CEEEEEEESEEEETTCGG---GTSEEEESSEEEEECT
T ss_pred CCCeEEEEEEEC--C---ccceEEEEEEeCCCCCccCccCCC-CEEEEEEEEEEEecCccc---cCccccCCCeEEEcCC
Confidence 345566665322 2 235678899999999999999998 888999999998754432 0157889999999999
Q ss_pred CCeEEEEecCCccEEEEEEEcCC
Q 027585 156 GLIHFQQNVGEGKALAFTAFNSH 178 (221)
Q Consensus 156 g~~H~~~N~g~~~a~~l~~~~s~ 178 (221)
|..|..... ++..+++.+...+
T Consensus 101 Gs~H~p~~~-~~~~~~~~~~~Gp 122 (153)
T 3bal_A 101 GALHGKTFF-PVESQFYMTFLGP 122 (153)
T ss_dssp TCEESCCEE-SSCEEEEEEEESC
T ss_pred CCcccceeC-CCCeEEEEEEECC
Confidence 999985432 3344555555433
No 120
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=98.12 E-value=1.7e-05 Score=67.19 Aligned_cols=72 Identities=31% Similarity=0.295 Sum_probs=54.6
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
++++..+.+ .|..... .++. +|++||++|++++...++ ..++++||+++||+|..|.+...+.. -.+++.+
T Consensus 46 ~~~~G~~~~-~g~~~v~-~~p~-dE~~~VleG~~~lt~~g~-----~~~~~~Gd~~~ip~G~~~~w~~~~~~-~~~y~~~ 116 (238)
T 3myx_A 46 GIAAGIVEF-GTALSVE-AYPY-TEMLVMHRGSVTLTSGTD-----SVTLSTGESAVIGRGTQVRIDAQPES-LWAFCAS 116 (238)
T ss_dssp SEEEEEEEE-CSEEEES-SCSS-EEEEEEEESEEEEEETTE-----EEEEETTCEEEECTTCCEEEEECTTE-EEEEEEE
T ss_pred CeEEEEEEe-ccccccc-cCCC-cEEEEEEEeEEEEECCCe-----EEEEcCCCEEEECCCCEEEEEecCCe-EEEEEec
Confidence 477777777 5443322 2333 899999999999987443 89999999999999999999986554 3455566
Q ss_pred c
Q 027585 176 N 176 (221)
Q Consensus 176 ~ 176 (221)
.
T Consensus 117 ~ 117 (238)
T 3myx_A 117 T 117 (238)
T ss_dssp C
T ss_pred c
Confidence 6
No 121
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=98.03 E-value=5.9e-05 Score=58.92 Aligned_cols=97 Identities=9% Similarity=0.008 Sum_probs=68.3
Q ss_pred CCeeEEEeec-cccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCc-EEEEC
Q 027585 77 FGSAVTPANV-LAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGE-MFVIP 154 (221)
Q Consensus 77 ~g~~v~~~~~-~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GD-v~~~P 154 (221)
..|.++.+.. ...|.-- .. .......+||....||.|....|++++++|++.+.+.+... ..++.|.+.. .+.+|
T Consensus 16 ~RG~L~~~e~~~~ipf~i-kR-vy~~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg~~-~~~~~L~~~~~gL~Ip 92 (141)
T 2pa7_A 16 SRGSLVAIEENKNIPFSI-KR-VYYIFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDGNI-IQEITLDSPAVGLYVG 92 (141)
T ss_dssp TTEEEEEEETTTTSSSCC-CE-EEEEESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECSSC-EEEEEECCTTEEEEEC
T ss_pred CCCcEEEEeccCCCCCCc-cE-EEEEEecCCCCEECcCcCCCceEEEEEEccEEEEEEECCcE-EEEEEECCCCcEEEeC
Confidence 3556666654 4444421 11 22334456888999999999999999999999999966422 3456666554 59999
Q ss_pred CCCeEEEEecCCccEEEEEEEcC
Q 027585 155 RGLIHFQQNVGEGKALAFTAFNS 177 (221)
Q Consensus 155 ~g~~H~~~N~g~~~a~~l~~~~s 177 (221)
+|+.|.+.+.++. ++++.+-+.
T Consensus 93 pgvWh~~~~~s~~-avllvlas~ 114 (141)
T 2pa7_A 93 PAVWHEMHDFSSD-CVMMVLASD 114 (141)
T ss_dssp TTCEEEEECCCTT-CEEEEEESS
T ss_pred CCEEEEEEEcCCC-eEEEEECCC
Confidence 9999999999875 666665543
No 122
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=97.96 E-value=0.00017 Score=59.99 Aligned_cols=84 Identities=14% Similarity=0.235 Sum_probs=69.2
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEec--CCeEE----EEEecCCcEEEECCC--CeEEEEec-CC
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTT--NNVFY----SKVLSAGEMFVIPRG--LIHFQQNV-GE 166 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~--~~~~~----~~~L~~GDv~~~P~g--~~H~~~N~-g~ 166 (221)
.+++..+...||...++|-|. +.-++.|++|+++-.+-.. +|+.. ...+.+||+.+++++ .+|.+.|. ++
T Consensus 72 ~f~v~~l~W~PGq~spiHDH~-swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d 150 (211)
T 3uss_A 72 RFSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSD 150 (211)
T ss_dssp SCEEEEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEECCCCcCCCCCCC-eeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCC
Confidence 367888999999999999999 7999999999998876432 23311 478999999999987 89999998 47
Q ss_pred ccEEEEEEEcCCCC
Q 027585 167 GKALAFTAFNSHLP 180 (221)
Q Consensus 167 ~~a~~l~~~~s~~p 180 (221)
++++-|=+|..+..
T Consensus 151 ~~avSLHvYg~pl~ 164 (211)
T 3uss_A 151 RTSISIHVYGANIG 164 (211)
T ss_dssp SCEEEEEEESSCGG
T ss_pred CCEEEEEEcCCCCC
Confidence 88998888876653
No 123
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.80 E-value=6.8e-05 Score=56.71 Aligned_cols=62 Identities=16% Similarity=0.146 Sum_probs=47.8
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEec
Q 027585 97 ISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNV 164 (221)
Q Consensus 97 is~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~ 164 (221)
......+..||... ++.+.. +|++|||+|++++...+ |. ..++++||+++||+|..-.+.-.
T Consensus 42 ~~~GvWe~tPG~~~-~~~~~~-~E~~~iLeG~~~lt~dd--G~--~~~l~aGD~~~~P~G~~gtWev~ 103 (116)
T 3es4_A 42 TIVAVWMAEPGIYN-YAGRDL-EETFVVVEGEALYSQAD--AD--PVKIGPGSIVSIAKGVPSRLEIL 103 (116)
T ss_dssp CEEEEEEECSEEEE-ECCCSE-EEEEEEEECCEEEEETT--CC--CEEECTTEEEEECTTCCEEEEEC
T ss_pred EEEEEEecCCceeE-CeeCCC-cEEEEEEEeEEEEEeCC--Ce--EEEECCCCEEEECCCCeEEEEEe
Confidence 45556678888643 333332 59999999999998764 33 78999999999999999998764
No 124
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=97.71 E-value=0.00029 Score=56.82 Aligned_cols=74 Identities=15% Similarity=0.121 Sum_probs=61.4
Q ss_pred EEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecC------CeEEEEEec---CCcEEEECCCCeEEEEecCCccEEEEE
Q 027585 103 DFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTN------NVFYSKVLS---AGEMFVIPRGLIHFQQNVGEGKALAFT 173 (221)
Q Consensus 103 ~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~------~~~~~~~L~---~GDv~~~P~g~~H~~~N~g~~~a~~l~ 173 (221)
...+|....+|+|..-.++++|++|++...++|-- |+.....|. ....++||+|..|.+.+.++++++++.
T Consensus 59 ~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~ly 138 (174)
T 3ejk_A 59 EVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVAN 138 (174)
T ss_dssp EECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEEE
T ss_pred ECCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEEEE
Confidence 34788889999998779999999999999987632 456788888 567999999999999999887777666
Q ss_pred EEc
Q 027585 174 AFN 176 (221)
Q Consensus 174 ~~~ 176 (221)
..+
T Consensus 139 ~~s 141 (174)
T 3ejk_A 139 CTD 141 (174)
T ss_dssp EES
T ss_pred ECC
Confidence 544
No 125
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=97.69 E-value=0.00066 Score=54.53 Aligned_cols=131 Identities=17% Similarity=0.181 Sum_probs=86.5
Q ss_pred ccCCeeEEEeeccccC-CCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCE-EEEEEEecCCeEEEEE----ecCC
Q 027585 75 TIFGSAVTPANVLAFP-GVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGK-LLVGFFTTNNVFYSKV----LSAG 148 (221)
Q Consensus 75 ~~~g~~v~~~~~~~fP-~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~-~~v~~~~~~~~~~~~~----L~~G 148 (221)
.|.||..+....+.-+ .-.....+....-+.+|....||... ++|+.+...|. +++.+.+++|+..+.+ +.+|
T Consensus 26 HPEGG~yret~rs~~~~~~~R~~~T~IYfLL~~g~~S~~HRv~-sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~G 104 (170)
T 1yud_A 26 HVEGGFYRSSYRSETAFDPSRQLWSSIYFLLRTGEVSHFHRLT-ADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAG 104 (170)
T ss_dssp CTTSSEEEEEEECSSBSSSSSBSCEEEEEEEETTCCEEEEECS-SCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTT
T ss_pred CCCCceEEEeecCCCCCCCCCccceEEEEEECCCCCCeeEEcC-CCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccC
Confidence 4677777766654311 11222346777788999988888875 79999999998 5888888777755555 6779
Q ss_pred cE--EEECCCCeEEEEecCCccEEEEEEEcCCCCeeeeccchhhcCCCCCCHHHHHhhcCCCHHHHHHH
Q 027585 149 EM--FVIPRGLIHFQQNVGEGKALAFTAFNSHLPGAVIVPTTLFASTPSVPNQVLTKTFQVDDDLISTI 215 (221)
Q Consensus 149 Dv--~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~lf~~~p~~~~~vla~~f~l~~~~v~~l 215 (221)
+. ++||+|..+..++.+.+.+.+-++.. ||+..-...+ .+.+-|.+.|---.+.|++|
T Consensus 105 e~pQ~vVP~G~wqaa~~~~g~~~LV~C~Va---PGF~f~dfel------~~~~~L~~~~P~~~~~I~~l 164 (170)
T 1yud_A 105 ERPQFLVPKGCIFGSAMNQDGFSLVGCMVS---PGFTFDDFEL------FSQEALLAMYPQHKAVVQKL 164 (170)
T ss_dssp EESCEEECTTCEEEEEESSSSEEEEEEEES---SCCCGGGCCB------CBHHHHHHSCCTTHHHHTTS
T ss_pred ceeEEEECCCCEEEEEECCCCcEEEEEEEC---CCccCCceEE------cCHHHHHhHCchhHHHHHHh
Confidence 98 99999999999998335555555543 5543332222 34455555565555555544
No 126
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.52 E-value=0.00039 Score=58.51 Aligned_cols=75 Identities=7% Similarity=-0.102 Sum_probs=55.2
Q ss_pred ceEEEEEEEcCCC--cCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEec--CCccEEE
Q 027585 96 GISMNRVDFAPGG--LNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNV--GEGKALA 171 (221)
Q Consensus 96 gis~~~v~l~Pgg--~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~--g~~~a~~ 171 (221)
++-+....+.... ..++|||+. -|++||.+|+++ .+++.... .+.+++||++++|+|..|.+... ++++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~v~~G~~~-~i~~~~~~--~~~l~~g~l~~i~p~~~h~~~~~~~~~~~~~~ 81 (276)
T 3gbg_A 6 SFQTNVYRMSKFDTYIFNNLYIND-YKMFWIDSGIAK-LIDKNCLV--SYEINSSSIILLKKNSIQRFSLTSLSDENINV 81 (276)
T ss_dssp TEEEEEEEECTTCEEEEEEEECSS-CEEEEESSSCEE-EEETTTTE--EEEECTTEEEEECTTCEEEEEEEECCSSCEEE
T ss_pred hhhhhhhhhhcccchhccHhhhcc-eEEEEEecCceE-EECCccce--eEEEcCCCEEEEcCCCceeeccccCCCcceEE
Confidence 3445566666554 357899987 999999999999 77643111 68999999999999999998765 3444444
Q ss_pred EEE
Q 027585 172 FTA 174 (221)
Q Consensus 172 l~~ 174 (221)
+.+
T Consensus 82 ~~i 84 (276)
T 3gbg_A 82 SVI 84 (276)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 127
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.51 E-value=0.00043 Score=58.55 Aligned_cols=63 Identities=13% Similarity=0.138 Sum_probs=50.6
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEec
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNV 164 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~ 164 (221)
.++....+..||....+++ + .+|++|||+|++++...+ |+ ..++++||+++||+|..-.|.-.
T Consensus 166 ~~~~GiW~~tpG~~~~~~~-~-~~E~~~ILeG~v~lt~~~--G~--~~~~~aGD~~~~P~G~~~tWev~ 228 (238)
T 3myx_A 166 TLRIGVWDSTPYERISRPH-K-IHELMNLIEGRVVLSLEN--GS--SLTVNTGDTVFVAQGAPCKWTST 228 (238)
T ss_dssp SCEEEEEEECCEEBCCEEC-S-SCEEEEEEECCEEEEETT--SC--EEEECTTCEEEECTTCEEEEEES
T ss_pred CEEEeEEEeCCCEEECCcC-C-CCEEEEEEEeEEEEEeCC--CC--EEEECCCCEEEECCCCEEEEEEC
Confidence 3677888888988555432 3 489999999999998643 44 78999999999999999888765
No 128
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.20 E-value=0.00065 Score=56.77 Aligned_cols=64 Identities=17% Similarity=0.295 Sum_probs=52.7
Q ss_pred EEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEE
Q 027585 98 SMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFT 173 (221)
Q Consensus 98 s~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 173 (221)
....+.++||...++|.| +..|+ +||+|++. ++ ...+.+|+.+..|.|..|.... |++.|.++.
T Consensus 147 ~v~l~r~~~G~~~~~~~h-gG~Ei-lVL~G~~~----d~-----~~~~~~GsWlR~P~gs~h~~~a-g~~g~~i~~ 210 (223)
T 3o14_A 147 TVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVT----VN-----DEVLGRNAWLRLPEGEALSATA-GARGAKIWM 210 (223)
T ss_dssp EEEEEEECTTCEEEECCS-SCEEE-EEEEEEEE----ET-----TEEECTTEEEEECTTCCEEEEE-EEEEEEEEE
T ss_pred EEEEEEECCCCccCCCCC-CcEEE-EEEEeEEE----EC-----CceECCCeEEEeCCCCccCcEE-CCCCeEEEE
Confidence 356678899999999999 66886 99999975 33 4689999999999999999887 667776554
No 129
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=97.17 E-value=0.0021 Score=54.76 Aligned_cols=73 Identities=18% Similarity=0.322 Sum_probs=57.0
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEEC--CCCeEEEEecCC-ccEEEEEEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIP--RGLIHFQQNVGE-GKALAFTAF 175 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P--~g~~H~~~N~g~-~~a~~l~~~ 175 (221)
+....+.||.-.++|-|.+-+.+.||++|+++-. |..|. ..++++||+-+.. +|+.|.-.|..+ ++++++-+.
T Consensus 66 ln~~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQlW 141 (256)
T 2vec_A 66 LNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYR--DSEGN--HVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLW 141 (256)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEESEEEEE--ETTSC--EEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEEEE
T ss_pred ccccccCCCCccCCcCCCCcEEEEEEEeeEEEEE--eCCCC--EEEECCCeEEEEECCCCeEEEEEECCCCceEEEEEEE
Confidence 4456788998899999998555789999998765 33344 7899999999994 567999999754 677777654
No 130
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=97.08 E-value=0.0021 Score=54.05 Aligned_cols=79 Identities=23% Similarity=0.162 Sum_probs=59.0
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCcEEEEEEeC---EEEEEEEecC-------------CeEE------EEEecCCcEEEEC
Q 027585 97 ISMNRVDFAPGGLNPPHSHPRASESGIVIKG---KLLVGFFTTN-------------NVFY------SKVLSAGEMFVIP 154 (221)
Q Consensus 97 is~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G---~~~v~~~~~~-------------~~~~------~~~L~~GDv~~~P 154 (221)
..--.+.+.||+..|.|.|+.-.|-+++--| .+++...+++ |+.. ...|+||+.+-++
T Consensus 106 YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~ 185 (246)
T 3kmh_A 106 YAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLP 185 (246)
T ss_dssp EEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEEC
T ss_pred ceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEecC
Confidence 4556678899999999999998999999998 4455444432 2211 3589999999999
Q ss_pred CCCeEEEEecCC-ccEEEEEEE
Q 027585 155 RGLIHFQQNVGE-GKALAFTAF 175 (221)
Q Consensus 155 ~g~~H~~~N~g~-~~a~~l~~~ 175 (221)
+|+.|+++..+. +++.+-.+.
T Consensus 186 Pg~~H~F~ae~g~G~vligEVS 207 (246)
T 3kmh_A 186 PGLYHSFWAEAGFGDVLVGEVS 207 (246)
T ss_dssp TTEEEEEEECTTSCCEEEEEEE
T ss_pred CCCEEEEEecCCCccEEEEEcc
Confidence 999999998765 345554443
No 131
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=96.97 E-value=0.0042 Score=47.46 Aligned_cols=71 Identities=18% Similarity=0.235 Sum_probs=55.3
Q ss_pred cCCCcCCCC----CCCCCcEEEEEEeCEEEEEEEecCCe---EEEEEecCCcEEEECCCCeEEEEecCCccEEE-EEEEc
Q 027585 105 APGGLNPPH----SHPRASESGIVIKGKLLVGFFTTNNV---FYSKVLSAGEMFVIPRGLIHFQQNVGEGKALA-FTAFN 176 (221)
Q Consensus 105 ~Pgg~~~~H----~Hp~a~Ei~yVl~G~~~v~~~~~~~~---~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~-l~~~~ 176 (221)
.|++..+.| +|++..+.+.|++|++++..-+++|. .......+|+..++|++..|+++...+ ++++ +.++.
T Consensus 22 lP~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsd-d~~f~leFyc 100 (127)
T 3bb6_A 22 APAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTD-DTYFNIDFFV 100 (127)
T ss_dssp SCGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESST-TCEEEEEEEE
T ss_pred ChHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCC-CEEEEEEEEe
Confidence 367778889 59999999999999999986544443 345678999999999999999998655 5555 44443
No 132
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=96.97 E-value=0.0056 Score=54.09 Aligned_cols=73 Identities=26% Similarity=0.187 Sum_probs=55.3
Q ss_pred EEEcC-CCcCCCCCCCCCcEEEEEEeCEEEEEEE-ecC---------------------------------CeEEEEEec
Q 027585 102 VDFAP-GGLNPPHSHPRASESGIVIKGKLLVGFF-TTN---------------------------------NVFYSKVLS 146 (221)
Q Consensus 102 v~l~P-gg~~~~H~Hp~a~Ei~yVl~G~~~v~~~-~~~---------------------------------~~~~~~~L~ 146 (221)
+.+.| |+..++|+.+. .-++..++|+=++.+. .+. -...+.+|+
T Consensus 145 ~~~gp~g~~~~~H~D~~-dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~ 223 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFDAY-TNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLT 223 (342)
T ss_dssp EEEECSSCCCCSEECSS-EEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEEC
T ss_pred EEEeCCCCCCCCeECCh-hcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEEC
Confidence 55566 77889999765 7888889999888877 321 012578999
Q ss_pred CCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 147 AGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 147 ~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
+||++++|+|..|+.++.++++..-+++-
T Consensus 224 pGD~LyiP~gwwH~v~s~~~~~slsvsi~ 252 (342)
T 1vrb_A 224 PGTMLYLPRGLWHSTKSDQATLALNITFG 252 (342)
T ss_dssp TTCEEEECTTCEEEEECSSCEEEEEEEEC
T ss_pred CCcEEEeCCCccEEEEECCCCceEEEEEC
Confidence 99999999999999999865555444443
No 133
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=96.94 E-value=0.0062 Score=49.45 Aligned_cols=69 Identities=20% Similarity=0.197 Sum_probs=54.5
Q ss_pred cCCCcCCCCCC--CCCcEEEEEEeCEE-EEEEEecC-----CeEEEEEecC--CcEEEECCCCeEEEEecCCccEEEEEE
Q 027585 105 APGGLNPPHSH--PRASESGIVIKGKL-LVGFFTTN-----NVFYSKVLSA--GEMFVIPRGLIHFQQNVGEGKALAFTA 174 (221)
Q Consensus 105 ~Pgg~~~~H~H--p~a~Ei~yVl~G~~-~v~~~~~~-----~~~~~~~L~~--GDv~~~P~g~~H~~~N~g~~~a~~l~~ 174 (221)
.+|....+|+| ..-.++++|++|++ .+-++... |+.....|.+ +..++||+|..|.+.+.++. +.++..
T Consensus 56 ~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 134 (185)
T 1ep0_A 56 VRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE-CIVNYK 134 (185)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred cCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEEe
Confidence 47888999999 66699999999997 45555443 5677888876 58999999999999999877 555544
No 134
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=96.91 E-value=0.0069 Score=49.14 Aligned_cols=70 Identities=21% Similarity=0.104 Sum_probs=55.0
Q ss_pred cCCCcCCCCCC--CCCcEEEEEEeCEE-EEEEEecC-----CeEEEEEecC--CcEEEECCCCeEEEEecCCccEEEEEE
Q 027585 105 APGGLNPPHSH--PRASESGIVIKGKL-LVGFFTTN-----NVFYSKVLSA--GEMFVIPRGLIHFQQNVGEGKALAFTA 174 (221)
Q Consensus 105 ~Pgg~~~~H~H--p~a~Ei~yVl~G~~-~v~~~~~~-----~~~~~~~L~~--GDv~~~P~g~~H~~~N~g~~~a~~l~~ 174 (221)
.+|....+|+| ..-.++++|++|++ .+-++... |+.....|.+ +..++||+|..|.+.+.++. ++++..
T Consensus 57 ~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 135 (184)
T 2ixk_A 57 ARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY-AEFLYK 135 (184)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred CCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC-EEEEEe
Confidence 47888999999 55689999999997 55555443 5677788876 58999999999999999877 555544
Q ss_pred E
Q 027585 175 F 175 (221)
Q Consensus 175 ~ 175 (221)
.
T Consensus 136 ~ 136 (184)
T 2ixk_A 136 T 136 (184)
T ss_dssp E
T ss_pred C
Confidence 3
No 135
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=96.72 E-value=0.0079 Score=50.76 Aligned_cols=73 Identities=16% Similarity=0.210 Sum_probs=57.2
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEE--CCCCeEEEEecC-CccEEEEEEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVI--PRGLIHFQQNVG-EGKALAFTAF 175 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~--P~g~~H~~~N~g-~~~a~~l~~~ 175 (221)
+....+.||.-.++|-|.+-+.+.||++|+++-. |+.|. ..++++||+-+. -+|+.|.-.|.. +++++++-+.
T Consensus 43 ~n~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQlW 118 (242)
T 1tq5_A 43 INDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQ--DSMGN--KEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQIW 118 (242)
T ss_dssp EEEEEECTTCEEEEEEECSCEEEEEEEESEEEEE--ESSSC--EEEEETTCEEEEECTTCEEEEEECCCSSCCEEEEEEE
T ss_pred eccceeCCCCcCCCcCCCCcEEEEEEEEeEEEEE--eCCCC--cEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEEE
Confidence 3456688988889999999666999999998765 33344 689999999999 566899999975 4677776654
No 136
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=96.69 E-value=0.0077 Score=49.39 Aligned_cols=69 Identities=19% Similarity=0.131 Sum_probs=54.9
Q ss_pred cCCCcCCCCCCCCCcEEEEEEe-CEE-EEEEEecC----CeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 105 APGGLNPPHSHPRASESGIVIK-GKL-LVGFFTTN----NVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 105 ~Pgg~~~~H~Hp~a~Ei~yVl~-G~~-~v~~~~~~----~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
.+|....+|.|+. .++++|++ |++ .+.++..+ |+.....|.++..++||+|..|.+.+.++. +.++...
T Consensus 68 ~~GvlRGlH~h~q-~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~-a~~~y~~ 142 (197)
T 1nxm_A 68 RKNVLRGLHAEPW-DKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF-VAYSYLV 142 (197)
T ss_dssp ETTBEEEEEECSS-CEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE-EEEEEEE
T ss_pred CCCCcceeeeccc-ceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC-eEEEEEC
Confidence 6788899999965 89999999 996 44444431 567789999999999999999999998766 5554443
No 137
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=96.64 E-value=0.015 Score=47.57 Aligned_cols=69 Identities=19% Similarity=0.201 Sum_probs=53.4
Q ss_pred EcCCCcCCCCCCCC---CcEEEEEEeCEE-EEEEEecC-----CeEEEEEecC--CcEEEECCCCeEEEEecCCccEEEE
Q 027585 104 FAPGGLNPPHSHPR---ASESGIVIKGKL-LVGFFTTN-----NVFYSKVLSA--GEMFVIPRGLIHFQQNVGEGKALAF 172 (221)
Q Consensus 104 l~Pgg~~~~H~Hp~---a~Ei~yVl~G~~-~v~~~~~~-----~~~~~~~L~~--GDv~~~P~g~~H~~~N~g~~~a~~l 172 (221)
-.+|....+|+|.. -.++++|++|++ .+-++... |+.....|.+ +..++||+|..|.+.+.++. +.++
T Consensus 72 s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~-a~~l 150 (196)
T 1wlt_A 72 SRKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDS-IVIY 150 (196)
T ss_dssp ECTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSE-EEEE
T ss_pred CCCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEE
Confidence 35787889999964 489999999999 55555443 4677888886 68999999999999999874 4443
Q ss_pred E
Q 027585 173 T 173 (221)
Q Consensus 173 ~ 173 (221)
.
T Consensus 151 y 151 (196)
T 1wlt_A 151 F 151 (196)
T ss_dssp E
T ss_pred E
Confidence 3
No 138
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.56 E-value=0.0058 Score=49.72 Aligned_cols=66 Identities=24% Similarity=0.507 Sum_probs=50.1
Q ss_pred EEEEEcCCC-cCCCCCCCCCcEEEEEEeCEEEEEEEecCC----------------------------------eEEEEE
Q 027585 100 NRVDFAPGG-LNPPHSHPRASESGIVIKGKLLVGFFTTNN----------------------------------VFYSKV 144 (221)
Q Consensus 100 ~~v~l~Pgg-~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~----------------------------------~~~~~~ 144 (221)
..+-+.+++ ..++|+.+. .-+..+++|+=++.+..+.. +..+.+
T Consensus 126 ~~~wiG~~gs~t~~H~D~~-~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~ 204 (235)
T 4gjz_A 126 INAWFGPQGTISPLHQDPQ-QNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCI 204 (235)
T ss_dssp EEEEEECTTCEEEEECCSS-EEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEE
T ss_pred eEEEEeCCCCCceeeeccc-cceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEE
Confidence 445566654 567787665 77889999999998864320 224679
Q ss_pred ecCCcEEEECCCCeEEEEecCC
Q 027585 145 LSAGEMFVIPRGLIHFQQNVGE 166 (221)
Q Consensus 145 L~~GDv~~~P~g~~H~~~N~g~ 166 (221)
|++||++++|+|..|..+|.+.
T Consensus 205 l~pGD~LyiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 205 LSPGEILFIPVKYWHYVRALDL 226 (235)
T ss_dssp ECTTCEEEECTTCEEEEEESSS
T ss_pred ECCCCEEEeCCCCcEEEEECCC
Confidence 9999999999999999999864
No 139
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=96.40 E-value=0.015 Score=47.98 Aligned_cols=67 Identities=15% Similarity=0.232 Sum_probs=52.3
Q ss_pred cCCCcCCCCCCC---CCcEEEEEEeCEEEEEEEe-cC-----CeEEEEEecC--CcEEEECCCCeEEEEecCCccEEEE
Q 027585 105 APGGLNPPHSHP---RASESGIVIKGKLLVGFFT-TN-----NVFYSKVLSA--GEMFVIPRGLIHFQQNVGEGKALAF 172 (221)
Q Consensus 105 ~Pgg~~~~H~Hp---~a~Ei~yVl~G~~~v~~~~-~~-----~~~~~~~L~~--GDv~~~P~g~~H~~~N~g~~~a~~l 172 (221)
.+|....+|+|. .-.++++|++|++...+.| .. |+.....|.+ +..++||+|..|.+.+.++. +.++
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~-a~~~ 155 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH-TIVM 155 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS-EEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC-EEEE
Confidence 578889999995 3589999999996544443 22 5677888886 78999999999999999876 4444
No 140
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=96.39 E-value=0.027 Score=45.53 Aligned_cols=68 Identities=19% Similarity=0.081 Sum_probs=53.2
Q ss_pred cCCCcCCCCCCC---CCcEEEEEEeCEE-EEEEEecC-----CeEEEEEecC--CcEEEECCCCeEEEEecCCccEEEEE
Q 027585 105 APGGLNPPHSHP---RASESGIVIKGKL-LVGFFTTN-----NVFYSKVLSA--GEMFVIPRGLIHFQQNVGEGKALAFT 173 (221)
Q Consensus 105 ~Pgg~~~~H~Hp---~a~Ei~yVl~G~~-~v~~~~~~-----~~~~~~~L~~--GDv~~~P~g~~H~~~N~g~~~a~~l~ 173 (221)
.+|....+|+|. .-.++++|++|++ .+-++... |+.....|.+ +..++||+|..|.+.+.++. +.++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (183)
T 1dzr_A 55 KKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY-AEFLY 133 (183)
T ss_dssp ETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEE
Confidence 478889999995 5589999999997 55555442 4677788876 48999999999999999877 44443
No 141
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=96.23 E-value=0.029 Score=46.56 Aligned_cols=68 Identities=12% Similarity=0.017 Sum_probs=52.9
Q ss_pred cCCCcCCCCCCCC---CcEEEEEEeCEE-EEEEEecC-----CeEEEEEecCC--cEEEECCCCeEEEEecCCccEEEEE
Q 027585 105 APGGLNPPHSHPR---ASESGIVIKGKL-LVGFFTTN-----NVFYSKVLSAG--EMFVIPRGLIHFQQNVGEGKALAFT 173 (221)
Q Consensus 105 ~Pgg~~~~H~Hp~---a~Ei~yVl~G~~-~v~~~~~~-----~~~~~~~L~~G--Dv~~~P~g~~H~~~N~g~~~a~~l~ 173 (221)
.+|....+|+|.. -.++++|++|++ .+.++... |+.....|.+. ..++||+|..|.+.+.++. ++++.
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~~ly 141 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE-ATLCY 141 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC-eEEEE
Confidence 4788889999964 489999999997 45555432 46778888875 7999999999999999877 44443
No 142
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=96.22 E-value=0.053 Score=46.25 Aligned_cols=90 Identities=23% Similarity=0.202 Sum_probs=67.9
Q ss_pred ccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEEC
Q 027585 75 TIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIP 154 (221)
Q Consensus 75 ~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P 154 (221)
+...++.+..+. ..-|-+-.++.++|+...|+-.|.--.| +||++|++.++ ...|.+|...++|
T Consensus 75 ~~~~gs~RlLs~------~d~GaSTl~V~fpp~~~~P~Gi~~ad~E-~fVL~G~i~~G---------~~~l~~h~Y~f~P 138 (303)
T 2qdr_A 75 NIAPGSRRLLTW------HDSGASTSRVVLPPKFEAPSGIFTADLE-IFVIKGAIQLG---------EWQLNKHSYSFIP 138 (303)
T ss_dssp TSCCEEEEEEEE------CTTSCEEEEEEECTTCEECCBEESSCEE-EEEEESEEEET---------TEEECTTEEEEEC
T ss_pred CcCccceeeccc------CCCCcceEEEEecCCCCCCCcccccceE-EEEEEeEEEeC---------CEEecCCceEEec
Confidence 334455555543 2335678899999999998877765578 99999999874 4789999999999
Q ss_pred CCCeE-EEEecCCccEEEEEEEcCCCC
Q 027585 155 RGLIH-FQQNVGEGKALAFTAFNSHLP 180 (221)
Q Consensus 155 ~g~~H-~~~N~g~~~a~~l~~~~s~~p 180 (221)
+|+.- .+.-.|++++.++.+.+..-|
T Consensus 139 aGV~~~~~kv~~~~g~~iL~fe~g~~p 165 (303)
T 2qdr_A 139 AGVRIGSWKVLGGEEAEILWMENGSVP 165 (303)
T ss_dssp TTCCBCCEEEETTSCEEEEEEECSSSC
T ss_pred CCCccCceeecCCCCcEEEEEecCCcc
Confidence 99955 455568999999988555544
No 143
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=96.19 E-value=0.018 Score=50.83 Aligned_cols=73 Identities=21% Similarity=0.291 Sum_probs=55.3
Q ss_pred EEEcC-CCcCCCCCCCCCcEEEEEEeCEEEEEEEecC-----------------------------------CeEEEEEe
Q 027585 102 VDFAP-GGLNPPHSHPRASESGIVIKGKLLVGFFTTN-----------------------------------NVFYSKVL 145 (221)
Q Consensus 102 v~l~P-gg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~-----------------------------------~~~~~~~L 145 (221)
+.+.| |...++|+.+. .-+..+++|+=++.+..+. -+..+.+|
T Consensus 187 l~iG~~gs~t~~H~D~~-~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 265 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGEQ-QNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVV 265 (349)
T ss_dssp EEEECTTCEEEEECCSE-EEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEE
T ss_pred EEEECCCCCccceECCh-hcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEE
Confidence 55654 45679998776 7889999999888875431 03468999
Q ss_pred cCCcEEEECCCCeEEEEecCC-ccEEEEEEE
Q 027585 146 SAGEMFVIPRGLIHFQQNVGE-GKALAFTAF 175 (221)
Q Consensus 146 ~~GDv~~~P~g~~H~~~N~g~-~~a~~l~~~ 175 (221)
++||++++|+|..|...|.++ .....+...
T Consensus 266 ~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w 296 (349)
T 3d8c_A 266 GPGDVLYIPMYWWHHIESLLNGGITITVNFW 296 (349)
T ss_dssp CTTCEEEECTTCEEEEEECTTSCCEEEEEEE
T ss_pred CCCCEEEECCCCcEEEEEcCCCCcEEEEEEE
Confidence 999999999999999999873 445555543
No 144
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=96.08 E-value=0.049 Score=44.80 Aligned_cols=68 Identities=12% Similarity=0.103 Sum_probs=52.6
Q ss_pred cCCCcCCCCCCCC---CcEEEEEEeCEEE-EEEEecC-----CeEEEEEecCC--cEEEECCCCeEEEEecCCccEEEEE
Q 027585 105 APGGLNPPHSHPR---ASESGIVIKGKLL-VGFFTTN-----NVFYSKVLSAG--EMFVIPRGLIHFQQNVGEGKALAFT 173 (221)
Q Consensus 105 ~Pgg~~~~H~Hp~---a~Ei~yVl~G~~~-v~~~~~~-----~~~~~~~L~~G--Dv~~~P~g~~H~~~N~g~~~a~~l~ 173 (221)
.+|....+|+|.. -.++++|++|++. +-++... |+.....|.+. ..++||+|..|.+.+.++. ++++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD-TVMSY 133 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT-EEEEE
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC-eEEEE
Confidence 5788889999953 4899999999974 4444432 46778888874 7999999999999999877 44444
No 145
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=95.99 E-value=0.02 Score=49.33 Aligned_cols=61 Identities=10% Similarity=0.102 Sum_probs=46.7
Q ss_pred EcCCCcC-CCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEE
Q 027585 104 FAPGGLN-PPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTA 174 (221)
Q Consensus 104 l~Pgg~~-~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 174 (221)
+.+|... ..-. .+-+++++||+..+.+++. ++.|++||++.||++..|.+... +.++++.+
T Consensus 214 ~G~Ges~~~~~~---~d~wiWqLEGss~Vt~~~q-----~~~L~~~DsLLIpa~~~y~~~r~--~gsv~L~I 275 (286)
T 2qnk_A 214 YGQGSSEGLRQN---VDVWLWQLEGSSVVTMGGR-----RLSLAPDDSLLVLAGTSYAWERT--QGSVALSV 275 (286)
T ss_dssp ECSEEEEECCCS---SCEEEEEEESCEEEEETTE-----EEEECTTEEEEECTTCCEEEEEC--TTCEEEEE
T ss_pred EcCCccccccCc---CcEEEEEEcCceEEEECCe-----EEeccCCCEEEecCCCeEEEEec--CCeEEEEE
Confidence 6666542 2222 2789999999999999887 99999999999999999999763 33444444
No 146
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=95.94 E-value=0.066 Score=44.68 Aligned_cols=68 Identities=15% Similarity=0.114 Sum_probs=52.5
Q ss_pred cCCCcCCCCCCCC---CcEEEEEEeCEE-EEEEEecC-----CeEEEEEecCC--cEEEECCCCeEEEEecCCccEEEEE
Q 027585 105 APGGLNPPHSHPR---ASESGIVIKGKL-LVGFFTTN-----NVFYSKVLSAG--EMFVIPRGLIHFQQNVGEGKALAFT 173 (221)
Q Consensus 105 ~Pgg~~~~H~Hp~---a~Ei~yVl~G~~-~v~~~~~~-----~~~~~~~L~~G--Dv~~~P~g~~H~~~N~g~~~a~~l~ 173 (221)
.+|....+|+|.. -.++++|++|++ .+-++... |+.....|.+. ..++||+|..|.+.+.++. ++++.
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~vly 152 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN-STVMY 152 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSS-EEEEE
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC-EEEEE
Confidence 5788889999953 489999999997 45554432 46677888874 7999999999999999877 44443
No 147
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=95.93 E-value=0.046 Score=49.94 Aligned_cols=65 Identities=22% Similarity=0.378 Sum_probs=49.4
Q ss_pred EEEEEcCCC-cC-CCCCCCCCcEEEEEEeCEEEEEEEecCC----------------eEEEEEecCCcEEEECCCCeEEE
Q 027585 100 NRVDFAPGG-LN-PPHSHPRASESGIVIKGKLLVGFFTTNN----------------VFYSKVLSAGEMFVIPRGLIHFQ 161 (221)
Q Consensus 100 ~~v~l~Pgg-~~-~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~----------------~~~~~~L~~GDv~~~P~g~~H~~ 161 (221)
..+.+.|+| .. ++|+-.. +-+++.++|+=++.+..+.. .....+|++||++|+|+|..|+.
T Consensus 141 ~n~y~~~~g~~g~~~H~D~~-dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~ 219 (442)
T 2xdv_A 141 SNVYITPAGSQGLPPHYDDV-EVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQA 219 (442)
T ss_dssp EEEEEECTTCBCSCSEECSS-EEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEE
T ss_pred cceEECCCCCCCccceECCc-ceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEE
Confidence 334555555 33 7999654 77888899998888765431 13478999999999999999999
Q ss_pred EecC
Q 027585 162 QNVG 165 (221)
Q Consensus 162 ~N~g 165 (221)
++.+
T Consensus 220 ~s~~ 223 (442)
T 2xdv_A 220 DTPA 223 (442)
T ss_dssp ECCS
T ss_pred EecC
Confidence 9875
No 148
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=95.59 E-value=0.13 Score=47.67 Aligned_cols=75 Identities=21% Similarity=0.337 Sum_probs=54.6
Q ss_pred EEEEEcCCCc--CCCCCCCCCcEEEEEEeCEEEEEEEecCC--------------------eEEEEEecCCcEEEECCCC
Q 027585 100 NRVDFAPGGL--NPPHSHPRASESGIVIKGKLLVGFFTTNN--------------------VFYSKVLSAGEMFVIPRGL 157 (221)
Q Consensus 100 ~~v~l~Pgg~--~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~--------------------~~~~~~L~~GDv~~~P~g~ 157 (221)
+.+.+.|++. .++|+-+. +-++.=++|+=++.+..+.. ...+.+|++||++++|+|.
T Consensus 166 ~N~Y~tp~Gs~g~~pH~D~~-DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~ 244 (489)
T 4diq_A 166 SNVYLTPPNSQGFAPHYDDI-EAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGF 244 (489)
T ss_dssp EEEEEECSSBCCSCCBCCSS-EEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTC
T ss_pred ceEEecCCCcccccCccCCc-ceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCC
Confidence 3455666664 47998775 77888888988888865421 1247899999999999999
Q ss_pred eEEEEecCCccEEEEEEE
Q 027585 158 IHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 158 ~H~~~N~g~~~a~~l~~~ 175 (221)
+|+..+.+++...=+.+-
T Consensus 245 ~H~~~s~~~~~SlhlTi~ 262 (489)
T 4diq_A 245 IHQAECQDGVHSLHLTLS 262 (489)
T ss_dssp EEEEEBCSSCCEEEEEEE
T ss_pred ceEEEecCCCceEEEeec
Confidence 999999876554444433
No 149
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=95.54 E-value=0.069 Score=43.81 Aligned_cols=66 Identities=12% Similarity=0.098 Sum_probs=52.1
Q ss_pred cCCCcCCCCCCC---CCcEEEEEEeCEEEEEEEec-C-----CeEEEEEecC--CcEEEECCCCeEEEEecCCccEE
Q 027585 105 APGGLNPPHSHP---RASESGIVIKGKLLVGFFTT-N-----NVFYSKVLSA--GEMFVIPRGLIHFQQNVGEGKAL 170 (221)
Q Consensus 105 ~Pgg~~~~H~Hp---~a~Ei~yVl~G~~~v~~~~~-~-----~~~~~~~L~~--GDv~~~P~g~~H~~~N~g~~~a~ 170 (221)
.+|....+|.|. .-..+++|++|++.--++|- . |+.....|.+ +..++||+|..|.+.+.++....
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~a~~ 128 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDDATL 128 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTTEEE
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCCeEE
Confidence 578888999984 45899999999976665542 1 5677788876 67999999999999998776433
No 150
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=95.48 E-value=0.05 Score=49.87 Aligned_cols=56 Identities=16% Similarity=0.112 Sum_probs=45.5
Q ss_pred CCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEE
Q 027585 112 PHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTA 174 (221)
Q Consensus 112 ~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 174 (221)
.-...+++|++++-+|++++.-.-. ...+++||.++||+|+.+++.-.+ +++.+.+
T Consensus 172 ~f~NaDGD~Livpq~G~l~i~TEfG-----~L~v~pgei~VIPRGi~frv~l~~--p~Rgyi~ 227 (471)
T 1eyb_A 172 CFYNSDGDFLIVPQKGNLLIYTEFG-----KMLVQPNEICVIQRGMRFSIDVFE--ETRGYIL 227 (471)
T ss_dssp EEEESSEEEEEEEEESCEEEEETTE-----EEEECTTEEEEECTTCCEEEECSS--SEEEEEE
T ss_pred eeecCCCCEEEEEEeCCEEEEEecc-----cEEeccCCEEEECCccEEEEeeCC--CceEEEE
Confidence 3445667999999999999986654 788999999999999999997765 6665543
No 151
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=95.42 E-value=0.04 Score=48.35 Aligned_cols=71 Identities=20% Similarity=0.158 Sum_probs=52.6
Q ss_pred EEEEcC-CCcCCCCCCCCCcEEEEEEeCEEEEEEEecC------------------------------CeEEEEEecCCc
Q 027585 101 RVDFAP-GGLNPPHSHPRASESGIVIKGKLLVGFFTTN------------------------------NVFYSKVLSAGE 149 (221)
Q Consensus 101 ~v~l~P-gg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~------------------------------~~~~~~~L~~GD 149 (221)
.+.+.| |+..++|+.+. .-++..++|+=++.+..+. -+..+.+|++||
T Consensus 170 ~l~~g~~g~~~~~H~D~~-~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD 248 (338)
T 3al5_A 170 VFRISSPGLQLWTHYDVM-DNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGD 248 (338)
T ss_dssp EEEEECTTCEEEEECCSS-EEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTC
T ss_pred eeEECCCCCCccceECCc-ccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCC
Confidence 344554 55678898775 6788889999888876431 024688999999
Q ss_pred EEEECCCCeEEEEecCCccEEEEEE
Q 027585 150 MFVIPRGLIHFQQNVGEGKALAFTA 174 (221)
Q Consensus 150 v~~~P~g~~H~~~N~g~~~a~~l~~ 174 (221)
++++|+|..|...|.+ ....+.+
T Consensus 249 ~LyiP~gWwH~v~~l~--~sisvn~ 271 (338)
T 3al5_A 249 VLFIPALWFHNVISEE--FGVGVNI 271 (338)
T ss_dssp EEEECTTCEEEEEESS--CEEEEEE
T ss_pred EEEECCCCeEEEeeCC--CEEEEEE
Confidence 9999999999999985 4455554
No 152
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=95.31 E-value=0.13 Score=43.97 Aligned_cols=81 Identities=16% Similarity=0.257 Sum_probs=54.9
Q ss_pred ceEEEEEEEcCCCc---CCCCCCCCC--c------EEEEE-Ee---CEEEEEEEecCC-eEEEEEecCCcEEEECCCCeE
Q 027585 96 GISMNRVDFAPGGL---NPPHSHPRA--S------ESGIV-IK---GKLLVGFFTTNN-VFYSKVLSAGEMFVIPRGLIH 159 (221)
Q Consensus 96 gis~~~v~l~Pgg~---~~~H~Hp~a--~------Ei~yV-l~---G~~~v~~~~~~~-~~~~~~L~~GDv~~~P~g~~H 159 (221)
.+-+..+ +.|||. .|||.|++. . |+.|- +. |-+.-.+-..++ --....++-||++.+|+|. |
T Consensus 152 ~LlvgEv-~tpgG~WSSyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~de~~~V~~~d~VlvP~Gy-H 229 (270)
T 2qjv_A 152 SLLVVEV-YTNAGATSSWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDECMAVYNRDVVXVPXGY-H 229 (270)
T ss_dssp SCEEEEE-EECTTCEESCSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSSEEEEEEETTCEEEESSSB-C
T ss_pred eEEEEEE-EcCCCccccCCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCCceEEEEECCCEEecCCCc-C
Confidence 3566666 778874 599999874 3 88765 43 444444412122 1237999999999999999 9
Q ss_pred EEEecCCccEEEEEEEcCC
Q 027585 160 FQQNVGEGKALAFTAFNSH 178 (221)
Q Consensus 160 ~~~N~g~~~a~~l~~~~s~ 178 (221)
-.........-++.+...+
T Consensus 230 p~~a~pGy~~YylwvMaG~ 248 (270)
T 2qjv_A 230 PVATIAGYDNYYLNVMAGP 248 (270)
T ss_dssp CEEECTTCEEEEEEEEECS
T ss_pred CCcCCCCcccEEEEEEECC
Confidence 8766545566688888764
No 153
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=95.19 E-value=0.043 Score=44.89 Aligned_cols=84 Identities=17% Similarity=0.206 Sum_probs=57.3
Q ss_pred cccCCCcccce-EEEEEEEcCCCcCCCCCCCCCcEE----EEEEeC-EEEEEEEecCCeEEEEEecCCcEEEECCCCeEE
Q 027585 87 LAFPGVNTLGI-SMNRVDFAPGGLNPPHSHPRASES----GIVIKG-KLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHF 160 (221)
Q Consensus 87 ~~fP~l~~~gi-s~~~v~l~Pgg~~~~H~Hp~a~Ei----~yVl~G-~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~ 160 (221)
.++|+....+. ++....+.||+.+++|..+....+ ..++-. ...+.++++ ++..++|++++|.-...|.
T Consensus 91 ~~ip~~~~~~~~~a~fs~L~pG~~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V~~~-----~~~w~eGe~~~fDds~~He 165 (197)
T 3rcq_A 91 EKFPETTGCRRGQIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRCANE-----TKTWEEGKVLIFDDSFEHE 165 (197)
T ss_dssp TTCHHHHTCTTCEEEEEEECTTEEEEEECCSCTTEEEEEEEEECCSSSEEEEETTE-----EECCCBTCEEEECTTSCEE
T ss_pred HhCcccccCCcceEEEEEeCCCCCcCCeeCCCCCeEEEEEEEEeCCCCcEEEECCE-----EEEeeCCcEEEEcCCeEEE
Confidence 45665432111 456678999999999988753333 222222 455666655 8899999999999999999
Q ss_pred EEecCCccEEEEEEEc
Q 027585 161 QQNVGEGKALAFTAFN 176 (221)
Q Consensus 161 ~~N~g~~~a~~l~~~~ 176 (221)
..|.++++-+ +.+++
T Consensus 166 v~N~~d~~Rv-vL~~D 180 (197)
T 3rcq_A 166 VWQDASSFRL-IFIVD 180 (197)
T ss_dssp EEECSSSCEE-EEEEE
T ss_pred EEECCCCCEE-EEEEe
Confidence 9999887543 33443
No 154
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=94.87 E-value=0.019 Score=49.75 Aligned_cols=68 Identities=15% Similarity=0.166 Sum_probs=47.8
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecC---------CeEEEEEecCCcEEEECCCCeEEEEecCCc
Q 027585 97 ISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTN---------NVFYSKVLSAGEMFVIPRGLIHFQQNVGEG 167 (221)
Q Consensus 97 is~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~---------~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~ 167 (221)
+.+.|+.+.||+.+.+|.=+ -|+....+|..++++.=.. |+ .+.+++|+++++....+|+..|.|++
T Consensus 91 l~~vRlrL~PG~~I~~HrD~--~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~--~~~m~~GE~w~~d~~~~H~v~N~g~~ 166 (290)
T 1e5r_A 91 LQMARSRNLKNAIVIPHRDF--VELDREVDRYFRTFMVLEDSPLAFHSNEDT--VIHMRPGEIWFLDAATVHSAVNFSEI 166 (290)
T ss_dssp EEEEEEEEEESEEEEEECCC----------CBCCEEEECSCCTTEEEEETTE--EECCCTTEEEECCTTSCEEEEESSSS
T ss_pred hheEEEEeCCCCEeeCccCc--cccccccCCceEEEeeEecCCCcEEEECCE--EEecCCCCEEEEcCCCeeEEEcCCCC
Confidence 46788899999999998543 2444445677666655322 22 78899999999999999999999876
Q ss_pred c
Q 027585 168 K 168 (221)
Q Consensus 168 ~ 168 (221)
+
T Consensus 167 ~ 167 (290)
T 1e5r_A 167 S 167 (290)
T ss_dssp C
T ss_pred C
Confidence 5
No 155
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=94.56 E-value=0.27 Score=42.05 Aligned_cols=69 Identities=17% Similarity=0.237 Sum_probs=54.6
Q ss_pred EEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECC--CCeEEEEecCCccEEEEEEE
Q 027585 103 DFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPR--GLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 103 ~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~--g~~H~~~N~g~~~a~~l~~~ 175 (221)
...|+.-.++|-|.+-+-+-||++|+++-. |+.|. ..++++||+=+.-+ |+.|.-.|..+++++.+-+.
T Consensus 45 ~~~~~~gf~~HPHrg~EtVTyvl~G~~~H~--DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlW 115 (277)
T 2p17_A 45 DIFERGTFDVHPHRGIETVTYVISGELEHF--DSKAG--HSTLGPGDVQWMTAGRGVVHKEDPASGSTVHSLQLW 115 (277)
T ss_dssp EEECTTCCCCEEECSEEEEEEEEESCEEEE--ETTTE--EEEECTTCEEEEECTTCEEEEEEECTTCCEEEEEEE
T ss_pred CCCCCCCCCCCCCCCcEEEEEEEEeEEEEe--eCCCC--ceEECCCeEEEEeCCCCEEEEeecCCCCCEEEEEEE
Confidence 667888899999998444889999998765 44454 68999999877776 56899999877788777654
No 156
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=93.88 E-value=0.21 Score=43.92 Aligned_cols=76 Identities=20% Similarity=0.202 Sum_probs=51.9
Q ss_pred EEEcC-CCcCCCCCCCCC-cEEEEEEeCEEEEEEEecC---------------------------------------CeE
Q 027585 102 VDFAP-GGLNPPHSHPRA-SESGIVIKGKLLVGFFTTN---------------------------------------NVF 140 (221)
Q Consensus 102 v~l~P-gg~~~~H~Hp~a-~Ei~yVl~G~~~v~~~~~~---------------------------------------~~~ 140 (221)
+-+.+ |...++|+++.. .-+..++.|+=++.+..+. .+.
T Consensus 176 ~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~~ 255 (336)
T 3k2o_A 176 FVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKP 255 (336)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGCC
T ss_pred EEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccCce
Confidence 44555 445688888753 3588888998777665321 022
Q ss_pred EEEEecCCcEEEECCCCeEEEEecCCccEEEEEEEcC
Q 027585 141 YSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFNS 177 (221)
Q Consensus 141 ~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s 177 (221)
.+.++++||++++|+|..|+..|.++.-++-....+.
T Consensus 256 ~~~~l~pGd~l~iP~gw~H~v~~~~~sisv~~~f~~~ 292 (336)
T 3k2o_A 256 LEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASS 292 (336)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECCT
T ss_pred EEEEECCCCEEEeCCCCcEEEecCCCeEEEEcccCCc
Confidence 4688999999999999999999987543333333333
No 157
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=93.71 E-value=0.33 Score=34.99 Aligned_cols=64 Identities=22% Similarity=0.139 Sum_probs=46.9
Q ss_pred EEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEE
Q 027585 103 DFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTA 174 (221)
Q Consensus 103 ~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 174 (221)
.+.||. .+....+.|+.-|++|++++.+.+++ ...+.++||.+.+|++.--.++-. ++...++.
T Consensus 29 Vm~pGe---ytF~T~~~E~M~vvsG~~~V~lpg~~---ew~~~~aGesF~Vpans~F~l~v~--~~~~YlC~ 92 (94)
T 2oyz_A 29 VMLPGE---YTFGTQAPERMTVVKGALVVKRVGEA---DWTTYSSGESFDVEGNSSFELQVK--DATAYLCE 92 (94)
T ss_dssp EECSEE---EEEEESSCEEEEEEESEEEEEETTCS---SCEEEETTCEEEECSSEEEEEEES--SCEEEEEE
T ss_pred EEeceE---EEEcCCCeEEEEEEEeEEEEEcCCCC---cCEEECCCCEEEECCCCEEEEEEc--ccEeEEEE
Confidence 345554 22233468999999999999997642 278999999999999988777663 44555554
No 158
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=93.43 E-value=0.22 Score=45.56 Aligned_cols=75 Identities=19% Similarity=0.112 Sum_probs=54.7
Q ss_pred cCCCcCCCCCCCCC-cEEEEEEeCEEEEEEEecC-------------------------CeEEEEEecCCcEEEECCCCe
Q 027585 105 APGGLNPPHSHPRA-SESGIVIKGKLLVGFFTTN-------------------------NVFYSKVLSAGEMFVIPRGLI 158 (221)
Q Consensus 105 ~Pgg~~~~H~Hp~a-~Ei~yVl~G~~~v~~~~~~-------------------------~~~~~~~L~~GDv~~~P~g~~ 158 (221)
.+|...+.|..+.. .-+..+++|+=++.+..+. .+....++++||+++||.|..
T Consensus 204 p~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIPsGWw 283 (451)
T 2yu1_A 204 VRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIPSGWI 283 (451)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEECTTCE
T ss_pred cCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeCCCce
Confidence 44556788998753 4577899999888876432 124578999999999999999
Q ss_pred EEEEecCCccEEEEEEEcCCC
Q 027585 159 HFQQNVGEGKALAFTAFNSHL 179 (221)
Q Consensus 159 H~~~N~g~~~a~~l~~~~s~~ 179 (221)
|...|..+.-+.---..++.|
T Consensus 284 H~V~nledsIait~NF~~~~n 304 (451)
T 2yu1_A 284 HAVYTPTDTLVFGGNFLHSFN 304 (451)
T ss_dssp EEEECSSCEEEEEEEECCSSS
T ss_pred EEEecCCCeEEEeeeeCCccc
Confidence 999998654443334455554
No 159
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=93.40 E-value=0.42 Score=41.10 Aligned_cols=82 Identities=21% Similarity=0.233 Sum_probs=55.8
Q ss_pred ceEEEEEEEcCCCc---CCCCCCCCCcEEEEEEe---CEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccE
Q 027585 96 GISMNRVDFAPGGL---NPPHSHPRASESGIVIK---GKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKA 169 (221)
Q Consensus 96 gis~~~v~l~Pgg~---~~~H~Hp~a~Ei~yVl~---G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a 169 (221)
.+-+..-.+.||+. .|||.|++..|..|--+ ....+++.++.++.....++-||++++|...+|. ..|.+.-
T Consensus 179 qllmg~evltpgg~WSSyPpHkHDrr~EeyyYF~l~~~gfv~q~~g~p~Etrhi~V~n~daVlvP~wh~h~--~~G~~~Y 256 (282)
T 1xru_A 179 QLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFHMMGQPQETRHIVMHNEQAVISPSWSIHS--GVGTKAY 256 (282)
T ss_dssp SCEEEEEEECTTCCEESCSEEECTTEEEEEEEESCCTTCCEEEEEEETTEEEEEEECSSEEEEECTTCEEE--EEESSCC
T ss_pred hEEEEEEEEeCCCCcCCCCCccCCCCceEEEEEEeCCCCEEEEEeCCCCCeeEEEEECCCEEEeCCCCCCC--CCCccce
Confidence 35566677888873 69999997777776654 1234444444444445678999999999656666 4466666
Q ss_pred EEEEEEcCCC
Q 027585 170 LAFTAFNSHL 179 (221)
Q Consensus 170 ~~l~~~~s~~ 179 (221)
.+|++...+|
T Consensus 257 ~ylwvMAG~n 266 (282)
T 1xru_A 257 TFIWGMVGEN 266 (282)
T ss_dssp EEEEEEEESC
T ss_pred EEEEEEEcCC
Confidence 6787776654
No 160
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=92.99 E-value=0.23 Score=40.79 Aligned_cols=75 Identities=19% Similarity=0.169 Sum_probs=46.2
Q ss_pred EEEEEEEcCCCcCCCCCCCCCcEE---EEEE----eCEEEEEEEecC------------------CeEEEEEecCCcEEE
Q 027585 98 SMNRVDFAPGGLNPPHSHPRASES---GIVI----KGKLLVGFFTTN------------------NVFYSKVLSAGEMFV 152 (221)
Q Consensus 98 s~~~v~l~Pgg~~~~H~Hp~a~Ei---~yVl----~G~~~v~~~~~~------------------~~~~~~~L~~GDv~~ 152 (221)
.......++|+...+|.|++ .-+ +|+- .|.+.+. ++. .......-++|++++
T Consensus 104 ~~W~~~~~~G~~~~~H~H~~-~~lSgV~Yl~~p~~~G~L~f~--~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvl 180 (216)
T 2rg4_A 104 DIWINILPEGGVHGSHIHPH-SVISGTTYVAMPEGTSALKLE--DPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLL 180 (216)
T ss_dssp EEEEEEECTTCCEEEECCTT-CSEEEEEEEECCSCSCCEEEE--CTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEE
T ss_pred eEEEEEcCCCCcccCccCCC-CeEEEEEEEECCCCCccEEEe--CCccccccccCcccccCcccCCCeeEecCCCCeEEE
Confidence 35556778999999999986 332 2322 2344443 321 111245679999999
Q ss_pred ECCCCeEEEEecCCccEEEEEEE
Q 027585 153 IPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 153 ~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
||+...|.......+.-|+-..|
T Consensus 181 FpS~l~H~V~p~~~~~~RiSIsF 203 (216)
T 2rg4_A 181 WESWLRHEVPMNMAEEDRISVSF 203 (216)
T ss_dssp EETTSCEEECCCCSSSCEEEEEE
T ss_pred ECCCCEEeccCCCCCCCEEEEEE
Confidence 99999999965433333444344
No 161
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=92.92 E-value=0.2 Score=46.36 Aligned_cols=62 Identities=16% Similarity=0.208 Sum_probs=48.2
Q ss_pred cCCCcCCCCCCCCCc-EEEEEEeCEEEEEEEecC-------------------------CeEEEEEecCCcEEEECCCCe
Q 027585 105 APGGLNPPHSHPRAS-ESGIVIKGKLLVGFFTTN-------------------------NVFYSKVLSAGEMFVIPRGLI 158 (221)
Q Consensus 105 ~Pgg~~~~H~Hp~a~-Ei~yVl~G~~~v~~~~~~-------------------------~~~~~~~L~~GDv~~~P~g~~ 158 (221)
..|...+.|..+... -+..+++|+=++.+..+. .+.++.++++||++++|+|..
T Consensus 274 ~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGWw 353 (488)
T 3kv5_D 274 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWI 353 (488)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCce
Confidence 445567899986533 467899999888887542 134578999999999999999
Q ss_pred EEEEecCC
Q 027585 159 HFQQNVGE 166 (221)
Q Consensus 159 H~~~N~g~ 166 (221)
|+..|..+
T Consensus 354 H~V~nled 361 (488)
T 3kv5_D 354 HAVLTSQD 361 (488)
T ss_dssp EEEEEEEE
T ss_pred EEeeCCCC
Confidence 99999744
No 162
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=92.86 E-value=0.38 Score=43.84 Aligned_cols=76 Identities=16% Similarity=0.158 Sum_probs=48.8
Q ss_pred ceEEEEEEEc--CCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEE-EEecCCcEEEECCCCeEEEEec---CCccE
Q 027585 96 GISMNRVDFA--PGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYS-KVLSAGEMFVIPRGLIHFQQNV---GEGKA 169 (221)
Q Consensus 96 gis~~~v~l~--Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~-~~L~~GDv~~~P~g~~H~~~N~---g~~~a 169 (221)
.+++.++++. ++.....-.+. ...+++|++|++++...+ ++. . ..|++||++++|++..-.+.+. +.+.+
T Consensus 356 eF~v~~~~~~~~~~~~~~~~~~~-~~~illv~~G~g~i~~~~--~~~-~~~~l~~G~~~fvpa~~~~~i~g~~~~~~~~~ 431 (440)
T 1pmi_A 356 EFSVLQTIFDKSKGGKQVIEGLN-GPSIVIATNGKGTIQITG--DDS-TKQKIDTGYVFFVAPGSSIELTADSANQDQDF 431 (440)
T ss_dssp SCEEEEEECCTTTCCEEEECCCS-SCEEEEEEESEEEEEETT--CGG-GCEEEETTCEEEECTTCCEEEEECSSCCSSCC
T ss_pred eEEEEEEEecCCCCceeEEecCC-CcEEEEEEeCeEEEEeCC--ccc-ceEEeccCCEEEEeCCCcEEEEEecccCCCcE
Confidence 3678888887 34222111233 488999999999987632 100 2 6899999999999954445554 14455
Q ss_pred EEEEEE
Q 027585 170 LAFTAF 175 (221)
Q Consensus 170 ~~l~~~ 175 (221)
+++.++
T Consensus 432 ~~~~a~ 437 (440)
T 1pmi_A 432 TTYRAF 437 (440)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555544
No 163
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=92.85 E-value=0.96 Score=38.94 Aligned_cols=82 Identities=20% Similarity=0.211 Sum_probs=46.7
Q ss_pred ceEEEEEEEcCCCc---CCCCCCCCCcEEEEEEe---CEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccE
Q 027585 96 GISMNRVDFAPGGL---NPPHSHPRASESGIVIK---GKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKA 169 (221)
Q Consensus 96 gis~~~v~l~Pgg~---~~~H~Hp~a~Ei~yVl~---G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a 169 (221)
.+-+..-.+.||+. .|||.|++..|..|--+ ....+++.++-++.....++-||++++|++-.|. ..|...-
T Consensus 179 qllmg~evltpGg~WSSyPpHkHDrr~E~yyYF~l~p~~~v~h~~g~pdEtrh~~V~n~daVlvP~wgyHp--~~Gt~~Y 256 (289)
T 1ywk_A 179 QLQMGYTILEPGSAWNTMPCHTHERRMEAYVYFDMEEDTRIFHMMGKPDETKHLVMSNEQAAISPSWSIHS--GVGTSNY 256 (289)
T ss_dssp SCEEEEEEECTTCCCCC--------CEEEEEEESCCTTCCEEEEESSTTSCEEEEECTTEEEEECTTSCCC--EEESSCC
T ss_pred eEEEEEEEEeCCCCcCCCCCccCCCCCeeEEEEEeCCCCeEEEECCCCCceEEEEEECCCEEEeCCCcccC--CCCCcCe
Confidence 35566677888873 59999997777776443 1123344443344445788999999999998886 2344454
Q ss_pred EEEEEEcCCC
Q 027585 170 LAFTAFNSHL 179 (221)
Q Consensus 170 ~~l~~~~s~~ 179 (221)
.+|++...+|
T Consensus 257 ~ylwvMAG~n 266 (289)
T 1ywk_A 257 SFIWAMCGEN 266 (289)
T ss_dssp EEEEEEECC-
T ss_pred EEEEEEEcCC
Confidence 5777776654
No 164
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=92.80 E-value=3 Score=33.16 Aligned_cols=107 Identities=18% Similarity=0.225 Sum_probs=70.2
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCE-EEEEEEecCCeEEEEEec----CCc---EEEECCCCeEEEEecCCcc
Q 027585 97 ISMNRVDFAPGGLNPPHSHPRASESGIVIKGK-LLVGFFTTNNVFYSKVLS----AGE---MFVIPRGLIHFQQNVGEGK 168 (221)
Q Consensus 97 is~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~-~~v~~~~~~~~~~~~~L~----~GD---v~~~P~g~~H~~~N~g~~~ 168 (221)
.+....-+.+|....||.- +++|+.+-..|. +++.+.+++|+..+.+|. +|+ -+++|+|.....+. | .
T Consensus 53 ~TaIYfLL~~~~~S~~HRv-~sdEiW~~~~G~pL~l~~~~~dG~~~~~~LG~d~~~Ge~~pQ~vVP~G~WqaA~~-~--~ 128 (172)
T 3loi_A 53 LTMIYYLMQAGQPDPFHRV-KSDETFVHNLGGSMKIHMIHPDGSYSCSILGNPLEHPEARHQVVVPRRVWFAQEV-D--G 128 (172)
T ss_dssp CEEEEEEEETTCCEEEEEC-SSEEEEEEEEESCEEEEEECTTSCEEEEEESCTTTSTTCBSEEEECTTCEEEEEE-S--S
T ss_pred ceEEEEEEcCCCCccCEEe-cCCEEEEEEcCCCEEEEEEcCCCceEEEEeCCCcccCCcceEEEECCCEEEEEEe-C--C
Confidence 3556667788875555544 469999999985 689999888877777664 577 78999999888877 3 2
Q ss_pred EEEEEEEcCCCCeeeeccchhhcCCCCCCHHHHHhhcCCCHHHHHHH
Q 027585 169 ALAFTAFNSHLPGAVIVPTTLFASTPSVPNQVLTKTFQVDDDLISTI 215 (221)
Q Consensus 169 a~~l~~~~s~~pg~~~~~~~lf~~~p~~~~~vla~~f~l~~~~v~~l 215 (221)
-.+++..- .||+..-...+ .+.+-|.+.|.--++.|++|
T Consensus 129 ~~LVsctV--aPGF~f~dfel------~~~~~L~~~~P~~~~~I~~l 167 (172)
T 3loi_A 129 YCLASVLV--APGFDFKDFSL------GKREELIKEYPQHRDVIMRC 167 (172)
T ss_dssp EEEEEEEE--ESCCCGGGCEE------CCHHHHHHHCGGGHHHHHHT
T ss_pred cEEEEEEE--cCCccchhcEE------cCHHHHHHHCchHHHHHHHh
Confidence 33333221 35543332222 45566666676556666665
No 165
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=92.80 E-value=0.66 Score=39.91 Aligned_cols=74 Identities=14% Similarity=0.214 Sum_probs=56.0
Q ss_pred EEEEEEEcCCCcCCCCCCCCCcEEEEEE-eCEEEEEEEecCCeEEEEEecCCcEEEECC--CCeEEEEecCCccEEEEEE
Q 027585 98 SMNRVDFAPGGLNPPHSHPRASESGIVI-KGKLLVGFFTTNNVFYSKVLSAGEMFVIPR--GLIHFQQNVGEGKALAFTA 174 (221)
Q Consensus 98 s~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl-~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~--g~~H~~~N~g~~~a~~l~~ 174 (221)
-+....+.|+.-.++|-|.+-+-+-||+ +|+++-. |+.|. ..++++||+-..-+ |+.|.-.|..+++++.+-+
T Consensus 41 ~ld~~~~~~~~Gf~~HPHrg~EtVTyvl~~G~~~H~--DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQl 116 (290)
T 1j1l_A 41 LFDEFKGGRPGGFPDHPHRGFETVSYLLEGGSMAHE--DFCGH--TGKMNPGDLQWMTAGRGILHAEMPCSEEPAHGLQL 116 (290)
T ss_dssp EEEEEEECTTCBEEEEEEBSEEEEEEECSSSCEEEE--ETTSC--EEEECTTCEEEEECTTCEEEEEEECSSSCEEEEEE
T ss_pred EEEccccCCCCCCCCCCCCCeEEEEEECcceEEEEe--eCCCC--ceEECCCcEEEEeCCCCEEEEeEcCCCCCEEEEEE
Confidence 3445567788778999999844478999 9998865 33344 68999999877765 5689999987778877766
Q ss_pred E
Q 027585 175 F 175 (221)
Q Consensus 175 ~ 175 (221)
.
T Consensus 117 W 117 (290)
T 1j1l_A 117 W 117 (290)
T ss_dssp E
T ss_pred E
Confidence 4
No 166
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=92.67 E-value=0.36 Score=42.05 Aligned_cols=56 Identities=20% Similarity=0.275 Sum_probs=40.8
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEE
Q 027585 97 ISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHF 160 (221)
Q Consensus 97 is~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~ 160 (221)
+++.++++.++... .......++.|++|++++...+. ...|++||++++|++...+
T Consensus 251 F~~~~~~~~~~~~~---~~~~~~~il~v~~G~~~l~~~~~-----~~~l~~G~~~~vpa~~~~~ 306 (319)
T 1qwr_A 251 FSVYKWDINGEAEM---AQDESFLICSVIEGSGLLKYEDK-----TCPLKKGDHFILPAQMPDF 306 (319)
T ss_dssp CEEEEEEEEEEEEE---CCCSSCEEEEEEEEEEEEEETTE-----EEEEETTCEEEECTTCCCE
T ss_pred EEEEEEEECCceEE---ccCCccEEEEEEcCeEEEEECCE-----EEEEcCCcEEEEeCCCceE
Confidence 56777777644322 22345899999999999976332 6799999999999987433
No 167
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=92.67 E-value=3.1 Score=34.47 Aligned_cols=132 Identities=14% Similarity=0.164 Sum_probs=78.2
Q ss_pred ccCCeeEEEeeccccC-----CCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCE-EEEEEEecCC----------
Q 027585 75 TIFGSAVTPANVLAFP-----GVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGK-LLVGFFTTNN---------- 138 (221)
Q Consensus 75 ~~~g~~v~~~~~~~fP-----~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~-~~v~~~~~~~---------- 138 (221)
-+.||..+....+... +-.....+....-+.+|....||. -+++|+.+.-.|. +++.+.+++|
T Consensus 33 HPEGG~yrEt~Rs~~~v~~~~~~~R~~~TaIYfLL~~g~~S~~HR-v~sdEiW~~h~G~pL~l~li~~dG~~~~~~~~~~ 111 (225)
T 3m3i_A 33 HPEGGYYSEVVRSAHKVDNEEGNRRHAYTTIYFLCTPESPSHLHR-LCSDETWMYHAGDPLQLHVILKDPQDEDRIAAQP 111 (225)
T ss_dssp CTTSSEEEEEEECSSEEECTTSCEEESCEEEEEEECSSSCEEEEE-CSSEEEEEEEEESCEEEEEEESSSTTTTC-----
T ss_pred CCCCceEEEEEECCCcccCCCCCCcccceeEEEEecCCCCcccEE-ecCCEEEEEECCCCEEEEEEcCCCcccccccccc
Confidence 4567777666543321 111112355556678887544444 3579999999987 6788877666
Q ss_pred ------------------eEEEEEec----CCc--EEEECCCCeEEEEecCCc-----cEEEEEEEcCCCCeeeeccchh
Q 027585 139 ------------------VFYSKVLS----AGE--MFVIPRGLIHFQQNVGEG-----KALAFTAFNSHLPGAVIVPTTL 189 (221)
Q Consensus 139 ------------------~~~~~~L~----~GD--v~~~P~g~~H~~~N~g~~-----~a~~l~~~~s~~pg~~~~~~~l 189 (221)
+..+.+|. +|+ -++||+|.....+..+++ .-.+++..- .||+..-...+
T Consensus 112 ~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~~~~~~~~~~~sLVsCtV--aPGFdF~DFel 189 (225)
T 3m3i_A 112 PAAPQAETDTADARPKYQVYRRVLVGARVERGELLQYTVPGGAIFGSSVAADGADGQAGYSLVSCIV--SPGFDYRDFEI 189 (225)
T ss_dssp -------------CCSSCEEEEEEESSCGGGTCBSEEEECTTCEEEEECCSSSTTCSSSCEEEEEEE--ESCCCGGGCEE
T ss_pred cccccccccccccccccCceEEEEeCCCccCCceeEEEeCCCEEEEEEECCCCcCcCCCeEEEEEEE--cCCccchhcEe
Confidence 45566664 466 679999998888776543 333333322 25544333222
Q ss_pred hcCCCCCCHHHHHhhcCCCHHHHHHH
Q 027585 190 FASTPSVPNQVLTKTFQVDDDLISTI 215 (221)
Q Consensus 190 f~~~p~~~~~vla~~f~l~~~~v~~l 215 (221)
.+.+-|.+.|.--++.|++|
T Consensus 190 ------~~~~~L~~~~P~~~~~I~~l 209 (225)
T 3m3i_A 190 ------FTQAQLMELYPQHEAVIKQM 209 (225)
T ss_dssp ------CBHHHHHHHCGGGHHHHHHH
T ss_pred ------cCHHHHHHHCchHHHHHHHh
Confidence 45556666665556666666
No 168
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=92.30 E-value=0.62 Score=34.50 Aligned_cols=67 Identities=16% Similarity=0.198 Sum_probs=49.9
Q ss_pred EEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 103 DFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 103 ~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
.+.||. .|.+....+.|+.-|++|++++.+.+++ ...+.++|+.|.+|++.--.++- .++..++|.|
T Consensus 43 Vm~PGe-~~YtF~T~~~E~MevvsG~l~V~Lpg~~---eW~~~~aGesF~VpanssF~lkv--~~~~~Y~C~y 109 (111)
T 3hqx_A 43 VILPTE-QPLTFETHVPERMEIISGECRVKIADST---ESELFRAGQSFYVPGNSLFKIET--DEVLDYVCHL 109 (111)
T ss_dssp EECCCS-SCEEEECSSCEEEEEEESEEEEEETTCS---SCEEEETTCEEEECTTCEEEEEC--SSCEEEEEEE
T ss_pred EEeccc-cceEEcCCCcEEEEEEEeEEEEEcCCcc---cCEEeCCCCEEEECCCCcEEEEE--CcceeEEEEc
Confidence 456663 1233344568999999999999998752 27899999999999999887775 3566666654
No 169
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=92.20 E-value=0.45 Score=43.50 Aligned_cols=75 Identities=19% Similarity=0.152 Sum_probs=52.6
Q ss_pred cCCCcCCCCCCCCC-cEEEEEEeCEEEEEEEecC-------------------------CeEEEEEecCCcEEEECCCCe
Q 027585 105 APGGLNPPHSHPRA-SESGIVIKGKLLVGFFTTN-------------------------NVFYSKVLSAGEMFVIPRGLI 158 (221)
Q Consensus 105 ~Pgg~~~~H~Hp~a-~Ei~yVl~G~~~v~~~~~~-------------------------~~~~~~~L~~GDv~~~P~g~~ 158 (221)
..|+..+.|..+.. .-+..+++|+=++.+..+. .+.++.++++||++++|+|..
T Consensus 239 ~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPsGWw 318 (447)
T 3kv4_A 239 VRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWI 318 (447)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecCCCCe
Confidence 34556788887643 3467899999888876432 133578999999999999999
Q ss_pred EEEEecCCccEEEEEEEcCCC
Q 027585 159 HFQQNVGEGKALAFTAFNSHL 179 (221)
Q Consensus 159 H~~~N~g~~~a~~l~~~~s~~ 179 (221)
|+..|..+.-+.---.+++.|
T Consensus 319 H~V~nledsIai~~NF~~~~n 339 (447)
T 3kv4_A 319 HAVLTPVDCLAFGGNFLHSLN 339 (447)
T ss_dssp EEEEESSCEEEEEEEECCSTT
T ss_pred EEEecCCCEEEEccccccccC
Confidence 999998554333333444443
No 170
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=91.93 E-value=0.21 Score=44.91 Aligned_cols=56 Identities=14% Similarity=0.077 Sum_probs=41.5
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeE
Q 027585 96 GISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIH 159 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H 159 (221)
.+++.++++.++.. ...+.+ ..++.|++|++++...++ +..|++||++++|++...
T Consensus 323 ~F~v~~~~l~~~~~--~~~~~~-~~il~v~~G~~~l~~~~~-----~~~l~~G~~~fvpa~~~~ 378 (394)
T 2wfp_A 323 DFAFSLHDLALQET--SIGQHS-AAILFCVEGEAVLRKDEQ-----RLVLKPGESAFIGADESP 378 (394)
T ss_dssp SCEEEEEECCSSCE--EECCSS-CEEEEEEEEEEEEEETTE-----EEEECTTCEEEECGGGCC
T ss_pred EEEEEEEEEcCCeE--EecCCC-cEEEEEEeceEEEEECCe-----EEEEccCcEEEEeCCCce
Confidence 46788888875532 123444 799999999999876443 689999999999998533
No 171
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=91.88 E-value=1.1 Score=33.69 Aligned_cols=51 Identities=16% Similarity=0.104 Sum_probs=39.5
Q ss_pred CCCcEEEEEEeCEEEEEEEecCCe---EEEEEecCCcEEEECCCCeEEEEecCC
Q 027585 116 PRASESGIVIKGKLLVGFFTTNNV---FYSKVLSAGEMFVIPRGLIHFQQNVGE 166 (221)
Q Consensus 116 p~a~Ei~yVl~G~~~v~~~~~~~~---~~~~~L~~GDv~~~P~g~~H~~~N~g~ 166 (221)
.+...-+-|++|++++..-+++|. .....+.+|+.-++|+...|++...++
T Consensus 36 ~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sdD 89 (119)
T 3dl3_A 36 VDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSDD 89 (119)
T ss_dssp TTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECTT
T ss_pred CcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECCC
Confidence 456677999999999996543332 246789999999999999999994333
No 172
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=91.69 E-value=0.32 Score=43.80 Aligned_cols=65 Identities=15% Similarity=0.180 Sum_probs=49.1
Q ss_pred EEEcC-CCcCCCCCCCCCc-EEEEEEeCEEEEEEEecC-------------------------CeEEEEEecCCcEEEEC
Q 027585 102 VDFAP-GGLNPPHSHPRAS-ESGIVIKGKLLVGFFTTN-------------------------NVFYSKVLSAGEMFVIP 154 (221)
Q Consensus 102 v~l~P-gg~~~~H~Hp~a~-Ei~yVl~G~~~v~~~~~~-------------------------~~~~~~~L~~GDv~~~P 154 (221)
+-+.| |...+.|+.+... -+..+++|+=++.+..++ .+.++.++++||++++|
T Consensus 179 l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIP 258 (397)
T 3kv9_A 179 CLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVP 258 (397)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEEC
T ss_pred EEEcCCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeC
Confidence 34444 5567889987543 467899999888877542 13457899999999999
Q ss_pred CCCeEEEEecCC
Q 027585 155 RGLIHFQQNVGE 166 (221)
Q Consensus 155 ~g~~H~~~N~g~ 166 (221)
+|..|+..|..+
T Consensus 259 sGW~H~V~nled 270 (397)
T 3kv9_A 259 TGWIHAVLTSQD 270 (397)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCCeEEccCCcC
Confidence 999999999744
No 173
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=91.65 E-value=0.33 Score=43.31 Aligned_cols=63 Identities=17% Similarity=0.197 Sum_probs=47.8
Q ss_pred cCCCcCCCCCCCCCc-EEEEEEeCEEEEEEEecC-------------------------CeEEEEEecCCcEEEECCCCe
Q 027585 105 APGGLNPPHSHPRAS-ESGIVIKGKLLVGFFTTN-------------------------NVFYSKVLSAGEMFVIPRGLI 158 (221)
Q Consensus 105 ~Pgg~~~~H~Hp~a~-Ei~yVl~G~~~v~~~~~~-------------------------~~~~~~~L~~GDv~~~P~g~~ 158 (221)
+.|+..+.|..+... -+..+++|+=++.+..+. .+.++.++++||++++|+|..
T Consensus 155 p~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIPsGWw 234 (371)
T 3k3o_A 155 VRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWI 234 (371)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeCCCCe
Confidence 345567889887644 366899999888876331 134678999999999999999
Q ss_pred EEEEecCCc
Q 027585 159 HFQQNVGEG 167 (221)
Q Consensus 159 H~~~N~g~~ 167 (221)
|+..|..+.
T Consensus 235 H~V~nledS 243 (371)
T 3k3o_A 235 HAVLTPVDC 243 (371)
T ss_dssp EEEEEEEEE
T ss_pred EEEecCCCe
Confidence 999997443
No 174
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=91.24 E-value=1.1 Score=37.51 Aligned_cols=73 Identities=8% Similarity=-0.042 Sum_probs=50.4
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEE
Q 027585 95 LGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTA 174 (221)
Q Consensus 95 ~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 174 (221)
..+.+..+.++||+....-..++..-++||++|++++. | ..|++||.+++..+..-.+.+ .++++++.+
T Consensus 158 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~v~~G~v~v~-----g----~~l~~gd~~~~~~~~~l~l~a--~~~a~~Ll~ 226 (242)
T 1tq5_A 158 QDMELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTIN-----G----VKASTSDGLAIWDEQAISIHA--DSDSEVLLF 226 (242)
T ss_dssp SSCEEEEEEECTTCEEEECCCTTCEEEEEEEESEEEET-----T----EEEETTCEEEEESCSCEEEEE--SSSEEEEEE
T ss_pred CCCEEEEEEECCCCEEEeecCCCcEEEEEEccCcEEEC-----C----EEeCCCCEEEECCCCeEEEEe--CCCCEEEEE
Confidence 35778889999998753333444467899999998872 2 369999999998766545555 355666655
Q ss_pred EcCC
Q 027585 175 FNSH 178 (221)
Q Consensus 175 ~~s~ 178 (221)
-...
T Consensus 227 ~~~~ 230 (242)
T 1tq5_A 227 DLPP 230 (242)
T ss_dssp EECC
T ss_pred ECCc
Confidence 4433
No 175
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=90.65 E-value=0.9 Score=39.17 Aligned_cols=56 Identities=13% Similarity=0.070 Sum_probs=40.3
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCc-EEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEE
Q 027585 97 ISMNRVDFAPGGLNPPHSHPRAS-ESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQ 162 (221)
Q Consensus 97 is~~~v~l~Pgg~~~~H~Hp~a~-Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~ 162 (221)
+++.++++.+.... .. ++. .++.|++| +++...+. ...|++||++++|++...+..
T Consensus 230 F~v~~~~~~~~~~~---~~-~~~~~il~v~~G-~~i~~~~~-----~~~l~~G~~~~ipa~~~~~~i 286 (300)
T 1zx5_A 230 FGLEVVDVTGTAEI---KT-GGVMNILYAAEG-YFILRGKE-----TADLHRGYSCLVPASTDSFTV 286 (300)
T ss_dssp EEEEEEEEEEEEEE---EC-CSBCEEEEEEES-CEEEESSS-----EEEECTTCEEEECTTCCEEEE
T ss_pred EEEEEEEECCceEE---ec-CCceEEEEEccc-EEEEeCCe-----EEEEccceEEEEeCCCceEEE
Confidence 56777777642222 23 457 89999999 98876443 678999999999998854433
No 176
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=90.60 E-value=4.9 Score=31.35 Aligned_cols=90 Identities=13% Similarity=0.019 Sum_probs=60.6
Q ss_pred ccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCE-EEEEEEecCCeEEEEEec----CCc
Q 027585 75 TIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGK-LLVGFFTTNNVFYSKVLS----AGE 149 (221)
Q Consensus 75 ~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~-~~v~~~~~~~~~~~~~L~----~GD 149 (221)
.|.||..+....+...+-. .-.+....-+.+|....+|.=.+++|+.+-..|. +++.+..++|+..+.+|. +|+
T Consensus 19 HPEGG~yrEt~Rs~~~~~R-~~~TaIYfLL~~g~~S~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~~~~~LG~d~~~Ge 97 (154)
T 1znp_A 19 HPEGGFYHQTFRDKAGGER-GHSTAIYYLLEKGVRSHWHRVTDAVEVWHYYAGAPIALHLSQDGREVQTFTLGPAILEGE 97 (154)
T ss_dssp CTTSSEEEEEEECSSSTTT-CSCEEEEEEEESSCCEEEEEETTSCEEEEEEEESCEEEEEESSSSCCEEEEESSCTTTTE
T ss_pred CCCCccEEEEEeCCCCCCC-cceeEEEEEecCCCCCcceeccCCCEEEEeECCCCEEEEEEcCCCcEEEEEeCCCcccCc
Confidence 4678888776654332211 1234555556777765555532579999999987 888888777766666664 566
Q ss_pred --EEEECCCCeEEEEecC
Q 027585 150 --MFVIPRGLIHFQQNVG 165 (221)
Q Consensus 150 --v~~~P~g~~H~~~N~g 165 (221)
-++||+|.....+..|
T Consensus 98 ~pQ~vVP~G~WqaA~~~g 115 (154)
T 1znp_A 98 RPQVIVPANCWQSAESLG 115 (154)
T ss_dssp ESEEEECTTCEEEEEESS
T ss_pred ccEEEEcCCEEEEeeECC
Confidence 4899999999887664
No 177
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=89.89 E-value=0.69 Score=41.54 Aligned_cols=63 Identities=17% Similarity=0.194 Sum_probs=48.1
Q ss_pred cCCCcCCCCCCCCC-cEEEEEEeCEEEEEEEecC-------------------------CeEEEEEecCCcEEEECCCCe
Q 027585 105 APGGLNPPHSHPRA-SESGIVIKGKLLVGFFTTN-------------------------NVFYSKVLSAGEMFVIPRGLI 158 (221)
Q Consensus 105 ~Pgg~~~~H~Hp~a-~Ei~yVl~G~~~v~~~~~~-------------------------~~~~~~~L~~GDv~~~P~g~~ 158 (221)
+.|.....|..+.. .-+..+++|+=++.+..+. .+.++.++++||++++|+|..
T Consensus 182 p~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIPsGWw 261 (392)
T 3pua_A 182 VKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGWI 261 (392)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeCCCce
Confidence 44556788987653 4577899999888876432 133578999999999999999
Q ss_pred EEEEecCCc
Q 027585 159 HFQQNVGEG 167 (221)
Q Consensus 159 H~~~N~g~~ 167 (221)
|+..|..+.
T Consensus 262 H~V~nledS 270 (392)
T 3pua_A 262 YATLTPVDC 270 (392)
T ss_dssp EEEEEEEEE
T ss_pred EEEecCCCE
Confidence 999997443
No 178
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=89.67 E-value=0.43 Score=41.50 Aligned_cols=46 Identities=15% Similarity=0.369 Sum_probs=32.3
Q ss_pred CCcEEEEEEeC----EEEEEEEecC----------C----eEEEEEecCCcEEEECCCCeEEEE
Q 027585 117 RASESGIVIKG----KLLVGFFTTN----------N----VFYSKVLSAGEMFVIPRGLIHFQQ 162 (221)
Q Consensus 117 ~a~Ei~yVl~G----~~~v~~~~~~----------~----~~~~~~L~~GDv~~~P~g~~H~~~ 162 (221)
+-.|.+|+++. ++.++..+.+ | -+....|++||.+++|+|.+|.+.
T Consensus 116 gKpE~~y~L~~~~~~~~~~G~~~~~~e~l~~~i~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (319)
T 1qwr_A 116 GKTECWYIIDCKENAEIIYGHTARSKTELVTMINSGDWEGLLRRIKIKPGDFYYVPSGTLHALC 179 (319)
T ss_dssp CCCEEEEEEEECTTCEEEEEECCSSHHHHHHHHHTTCHHHHEEEEECCTTCEEEECTTCCEEEC
T ss_pred CCCEEEEEccCCCchhheeCCCCCCHHHHHHHHHcCCHHHhceEEEcCCCCEEEcCCCCceEec
Confidence 35899999985 3444421110 1 024789999999999999999974
No 179
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=88.53 E-value=3.8 Score=34.85 Aligned_cols=84 Identities=8% Similarity=-0.045 Sum_probs=55.5
Q ss_pred EEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEe--cC--------CcE
Q 027585 81 VTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVL--SA--------GEM 150 (221)
Q Consensus 81 v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L--~~--------GDv 150 (221)
+..++...- ++. -+.+..++|++|.......-.+ +-.++.+.|++++.++++ ++.+ .. .|+
T Consensus 16 ~~~itp~~a-~~~--y~~f~~~~L~~Ge~~~~~~~~~-E~~iv~l~G~~~V~~~g~-----~~~~~g~R~svF~~~~p~~ 86 (270)
T 2qjv_A 16 IQHISPQNA-GWE--YVGFDVWQLXAGESITLPSDER-ERCLVLVAGLASVXAADS-----FFYRIGQRMSPFERIPAYS 86 (270)
T ss_dssp EEEECHHHH-TSS--SCEEEEEEECTTCEEEECCSSE-EEEEEEEESCEEEEETTE-----EEEEECCCSSGGGCSCCCE
T ss_pred EEEeCCCCC-CcE--EeEEEEEEecCCCEEEecCCCc-EEEEEEecceEEEEECCE-----EEeccccccccccCCCCcE
Confidence 555554332 222 1568888999999776665432 444566789999998776 5655 22 499
Q ss_pred EEECCCCeEEEEecCCccEEEEEEE
Q 027585 151 FVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 151 ~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
+++|+|.--.+...+ ++++....
T Consensus 87 lYvp~g~~v~i~a~~--~~~~~v~s 109 (270)
T 2qjv_A 87 VYLPHHTEAXVTAET--DLELAVCS 109 (270)
T ss_dssp EEECSSCCEEEEESS--SEEEEEEE
T ss_pred EEECCCCEEEEEecC--CceEEEEe
Confidence 999999966666654 46655544
No 180
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=88.06 E-value=1.4 Score=32.35 Aligned_cols=55 Identities=22% Similarity=0.141 Sum_probs=42.2
Q ss_pred EEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEe
Q 027585 103 DFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQN 163 (221)
Q Consensus 103 ~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N 163 (221)
.+.||. .+....+.|+.-|++|++++.+.+++ ...++++||.|.+|++.--.++-
T Consensus 42 Vm~PGe---Y~F~T~~~E~MevvsG~l~V~LpG~~---eW~~~~aGesF~VpanssF~lkv 96 (106)
T 3eo6_A 42 LLHPGV---YTLSSEVAETIRVLSGMAYYHAEGAN---DVQELHAGDSMVIPANQSYRLEV 96 (106)
T ss_dssp EECSEE---EEECCSSCEEEEEEEEEEEEECTTCS---SCEEEETTCEEEECSSSCEEEEE
T ss_pred EEeeeE---EEecCCCcEEEEEEEeEEEEECCCCc---cCEEECCCCEEEECCCCcEEEEE
Confidence 345553 23344569999999999999987642 27899999999999998777664
No 181
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=87.69 E-value=3 Score=35.12 Aligned_cols=72 Identities=14% Similarity=0.040 Sum_probs=48.3
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEE
Q 027585 95 LGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFT 173 (221)
Q Consensus 95 ~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 173 (221)
..+.+..+.++||.....-...+. -++||++|++++. +.++ ....|.+||.+++..+..-.+.+ .++++++.
T Consensus 180 ~~~~~~~~~L~~g~~~~~~~~~~~-~~l~v~~G~v~v~--g~~~--~~~~l~~gd~~~l~~~~~l~l~a--~~~a~~LL 251 (256)
T 2vec_A 180 QQVWLHHIVLDKGESANFQLHGPR-AYLQSIHGKFHAL--THHE--EKAALTCGDGAFIRDEANITLVA--DSPLRALL 251 (256)
T ss_dssp SSCEEEEEEECTTCEEEEECSSSE-EEEEEEESCEEEE--ETTE--EEEEECTTCEEEEESCSEEEEEE--SSSEEEEE
T ss_pred CCcEEEEEEECCCCEEEEecCCCe-EEEEEEECEEEEC--Cccc--cceEECCCCEEEECCCCeEEEEe--CCCCEEEE
Confidence 356788889999987644443443 7899999998874 3111 14679999999997665444444 24555554
No 182
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=87.48 E-value=0.53 Score=42.18 Aligned_cols=40 Identities=18% Similarity=0.204 Sum_probs=31.7
Q ss_pred EEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEEcCCC
Q 027585 140 FYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFNSHL 179 (221)
Q Consensus 140 ~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~ 179 (221)
.++..-++||.++||+|.+|..+|..+.--+..-.++.++
T Consensus 292 ~~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe~ 331 (392)
T 2ypd_A 292 TCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEH 331 (392)
T ss_dssp CEEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCGGG
T ss_pred eEEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcChhh
Confidence 4578889999999999999999999865555555555544
No 183
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=87.47 E-value=2.3 Score=36.44 Aligned_cols=79 Identities=10% Similarity=0.059 Sum_probs=51.9
Q ss_pred ccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEE
Q 027585 94 TLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFT 173 (221)
Q Consensus 94 ~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 173 (221)
...+.+..+.+++|........++..-++||++|++++. +.+. ...+.++.++++..|..-.+.+.+.++++++.
T Consensus 166 ~~~~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v~--g~~~---~~~~~~~~~~~l~~gd~~~i~~~a~~~a~~LL 240 (290)
T 1j1l_A 166 RTPTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIG--PDDA---QQKIEPHHTAVLGEGDSVQVENKDPKRSHFVL 240 (290)
T ss_dssp SSCEEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEES--CTTS---CEEECTTEEEEECSCSEEEEECCSSSCEEEEE
T ss_pred cCCcEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEEC--Cccc---ceeccCceEEEecCCCEEEEEEcCCCCcEEEE
Confidence 346788889999999763333333367899999999873 2100 14566777777776766556654566777776
Q ss_pred EEcC
Q 027585 174 AFNS 177 (221)
Q Consensus 174 ~~~s 177 (221)
+-..
T Consensus 241 l~G~ 244 (290)
T 1j1l_A 241 IAGE 244 (290)
T ss_dssp EEEC
T ss_pred EEcc
Confidence 5543
No 184
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=86.39 E-value=2.3 Score=36.17 Aligned_cols=74 Identities=11% Similarity=-0.007 Sum_probs=49.8
Q ss_pred ccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECC-C----CeEEEEecCCcc
Q 027585 94 TLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPR-G----LIHFQQNVGEGK 168 (221)
Q Consensus 94 ~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~-g----~~H~~~N~g~~~ 168 (221)
...+.+..+.++||........++..-++||++|++++ ++. ...|.+||.+++.. + ..-.+.+. ++
T Consensus 164 ~~~~~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v--~g~-----~~~l~~~d~~~~~~~~~~~~~~l~l~a~--~~ 234 (277)
T 2p17_A 164 IVPVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVF--GAD-----NIEGKAGQALFFSRHNRGEETELNVTAR--EK 234 (277)
T ss_dssp SSCEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEE--TTT-----TEEEETTEEEEECCCCTTCEEEEEEEES--SS
T ss_pred CCCCEEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEE--CCC-----ceEeCCCcEEEEcCCCCCccceEEEEeC--CC
Confidence 34678899999999976433333336789999999876 231 24799999999986 5 33344553 35
Q ss_pred EEEEEEEc
Q 027585 169 ALAFTAFN 176 (221)
Q Consensus 169 a~~l~~~~ 176 (221)
++++.+-.
T Consensus 235 a~~Ll~~G 242 (277)
T 2p17_A 235 LRLLLYAG 242 (277)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEec
Confidence 66665443
No 185
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=85.58 E-value=1.7 Score=40.51 Aligned_cols=62 Identities=19% Similarity=0.236 Sum_probs=45.6
Q ss_pred cCCCcCCCCCCCCC-cEEEEEEeCEEEEEEEecC-------------------------CeEEEEEecCCcEEEECCCCe
Q 027585 105 APGGLNPPHSHPRA-SESGIVIKGKLLVGFFTTN-------------------------NVFYSKVLSAGEMFVIPRGLI 158 (221)
Q Consensus 105 ~Pgg~~~~H~Hp~a-~Ei~yVl~G~~~v~~~~~~-------------------------~~~~~~~L~~GDv~~~P~g~~ 158 (221)
+.|....+|.-+.. .-+..|++|+=++.+..+. +.....++++||.+++|+|..
T Consensus 304 ~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIPsGW~ 383 (528)
T 3pur_A 304 MAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGWI 383 (528)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEecCCce
Confidence 34445677876543 3677888888887776542 123468999999999999999
Q ss_pred EEEEecCC
Q 027585 159 HFQQNVGE 166 (221)
Q Consensus 159 H~~~N~g~ 166 (221)
|+..|..+
T Consensus 384 HaV~tleD 391 (528)
T 3pur_A 384 HAVLTPVD 391 (528)
T ss_dssp EEEEEEEE
T ss_pred EEEecCCC
Confidence 99999744
No 186
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=85.13 E-value=12 Score=33.13 Aligned_cols=49 Identities=18% Similarity=0.135 Sum_probs=40.4
Q ss_pred cEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEecCCccEE
Q 027585 119 SESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKAL 170 (221)
Q Consensus 119 ~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~ 170 (221)
.--..|++|++++....++|. ....|+++|..++-+-++|.|. |.....
T Consensus 355 e~hY~v~~G~lTL~W~~~dGt-~~a~L~PDgSAwv~PFV~H~w~--G~GtVl 403 (443)
T 3g7d_A 355 ENHYVVTEGRLTLEWDGPDGP-ASVELEPDGSAWTGPFVRHRWH--GTGTVL 403 (443)
T ss_dssp EEEEEEEESCEEEEEEETTEE-EEEEECTTCEEEECTTCCEEEE--SSEEEE
T ss_pred cceEEEecCceEEEecCCCCc-cceEECCCCceeeccccccccc--CCceEE
Confidence 334558899999999988776 7899999999999999999998 454433
No 187
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=82.50 E-value=2.3 Score=30.54 Aligned_cols=52 Identities=12% Similarity=0.173 Sum_probs=32.4
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EE---EEEecCCcEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FY---SKVLSAGEMF 151 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~---~~~L~~GDv~ 151 (221)
+....+++|...-.- ......+.+|++|.+++...+.+|+ .. ...+.+||.+
T Consensus 29 ~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~f 84 (142)
T 3mdp_A 29 SEEKSFPTGSVIFKE-NSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIF 84 (142)
T ss_dssp EEEEEECTTCEEECT-TSBCCEEEEEEESCEEEECC---------CEEEEECTTCEE
T ss_pred hcEEecCCCCEEEeC-CCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEe
Confidence 455667777754222 2234889999999999987766663 33 5678999976
No 188
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=81.89 E-value=3.2 Score=29.91 Aligned_cols=51 Identities=16% Similarity=0.152 Sum_probs=36.4
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEE
Q 027585 100 NRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMF 151 (221)
Q Consensus 100 ~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~ 151 (221)
....+++|...-..-. ....+.+|++|.+.+...+.+|+ .....+.+||.+
T Consensus 29 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~ 80 (149)
T 2pqq_A 29 SEVTLARGDTLFHEGD-PGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELI 80 (149)
T ss_dssp EEEEECTTCEEECTTS-EECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEE
T ss_pred eEEEeCCCCEEECCCC-CCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEe
Confidence 4566777776433222 24779999999999998876664 346789999976
No 189
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=81.85 E-value=5.9 Score=34.01 Aligned_cols=69 Identities=10% Similarity=0.116 Sum_probs=44.1
Q ss_pred EEEcCCCcCCCCCCCCCcEEEEE-EeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEe-cC-CccEEEEEEE
Q 027585 102 VDFAPGGLNPPHSHPRASESGIV-IKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQN-VG-EGKALAFTAF 175 (221)
Q Consensus 102 v~l~Pgg~~~~H~Hp~a~Ei~yV-l~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N-~g-~~~a~~l~~~ 175 (221)
+.|+.|......+--+..|+.+| +.|.+++.++++ ++.|..-|++++|+|..-.... .+ ..++++....
T Consensus 62 l~L~~~~~~~~~~fl~~rE~~iV~lgG~~~V~vdg~-----~f~lg~~dalYVp~G~~~v~~as~d~~~~a~fav~s 133 (289)
T 1ywk_A 62 LEIILDKELGVDYFLERRELGVINIGGPGFIEIDGA-----KETMKKQDGYYIGKETKHVRFSSENPDNPAKFYISC 133 (289)
T ss_dssp EECCCSGGGTSSSTTTTEEEEEEECSSCEEEEETTE-----EEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEEE
T ss_pred EEcCCCceecccccCCCcEEEEEEccCeEEEEECCE-----EEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEc
Confidence 44555544333332233676554 589999999876 7899999999999997644433 22 3455555433
No 190
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=81.24 E-value=1.1 Score=38.51 Aligned_cols=45 Identities=22% Similarity=0.295 Sum_probs=34.6
Q ss_pred CcEEEEEEe-CEEEEEEEecC-----------Ce------EEEEEecCCcEEEECCCCeEEEE
Q 027585 118 ASESGIVIK-GKLLVGFFTTN-----------NV------FYSKVLSAGEMFVIPRGLIHFQQ 162 (221)
Q Consensus 118 a~Ei~yVl~-G~~~v~~~~~~-----------~~------~~~~~L~~GDv~~~P~g~~H~~~ 162 (221)
-.|.+|+++ .++..++.... ++ +....|++||.+++|+|.+|.+-
T Consensus 117 KpE~~y~L~~~~~~~Gf~~~~~~~~~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (300)
T 1zx5_A 117 VESAWLVFNKGKAYAGFKEDVKIEELEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAGE 179 (300)
T ss_dssp CCEEEEECSSCEEEEEESSCCCHHHHHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEEE
T ss_pred CcEEEEEcccHHHhhCCCCCCCHHHHHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEcC
Confidence 479999998 56666654321 33 45788999999999999999975
No 191
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=79.57 E-value=5.7 Score=29.40 Aligned_cols=51 Identities=10% Similarity=-0.010 Sum_probs=35.4
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMF 151 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~ 151 (221)
+....+.+|...-.. ...+..+.+|++|.+.+.. +.+|+ .....+.+||.+
T Consensus 61 ~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~-~~~g~~~~~~~~~~G~~f 112 (161)
T 3idb_B 61 MFEKLVKEGEHVIDQ-GDDGDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSF 112 (161)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEESEEEEEE-EETTEEEEEEEEESCCEE
T ss_pred cceeEeCCCCEEEeC-CCCCcEEEEEEeCEEEEEE-cCCCCeEEEEEcCCCCEe
Confidence 345677777754322 2334889999999999998 55564 345678999965
No 192
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=78.08 E-value=7.4 Score=29.84 Aligned_cols=51 Identities=16% Similarity=0.197 Sum_probs=36.3
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEE
Q 027585 100 NRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMF 151 (221)
Q Consensus 100 ~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~ 151 (221)
....+++|...-.. ......+.+|++|.+++...+++|+ .....+.+||++
T Consensus 14 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~ 65 (207)
T 2oz6_A 14 HRRRYTAKSTIIYA-GDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFF 65 (207)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEE
T ss_pred ceEEECCCCEEEcC-CCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCc
Confidence 34567777754222 2234789999999999998877665 345688999987
No 193
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=77.80 E-value=6.3 Score=30.46 Aligned_cols=117 Identities=13% Similarity=0.045 Sum_probs=69.1
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEEEE-----CCCCeEEEEecCCccEEEEE
Q 027585 100 NRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMFVI-----PRGLIHFQQNVGEGKALAFT 173 (221)
Q Consensus 100 ~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~~~-----P~g~~H~~~N~g~~~a~~l~ 173 (221)
....+++|...-..-.+ ...+.+|++|.+.+...+++|+ .....+.+||.+=. .....+.... .+++.++.
T Consensus 23 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a--~~~~~v~~ 99 (216)
T 4ev0_A 23 QRRLYPQGKPIFYQGDL-GQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVA--VEDTELLA 99 (216)
T ss_dssp EEEEECTTCEEECTTCB-CCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEE--SSSEEEEE
T ss_pred eEEEeCCCCEEEeCCCC-CCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEE--cCCEEEEE
Confidence 45567777754333223 4789999999999998877775 34678999998732 1122334444 34455554
Q ss_pred EEc-------CCCCeeeec----------------------------cchhh---cC----CCCCCHHHHHhhcCCCHHH
Q 027585 174 AFN-------SHLPGAVIV----------------------------PTTLF---AS----TPSVPNQVLTKTFQVDDDL 211 (221)
Q Consensus 174 ~~~-------s~~pg~~~~----------------------------~~~lf---~~----~p~~~~~vla~~f~l~~~~ 211 (221)
+-. ..+|..... +..+. .. ..+++.+-+|..+|++++.
T Consensus 100 i~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~sr~t 179 (216)
T 4ev0_A 100 LFREDYLALIRRLPLVAHNLAALLARRLREADLELDLLSFEEARNRVAYALLKLLRQGLGPLFQIRHHELAALAGTSRET 179 (216)
T ss_dssp EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCHHHHHHHHTSCHHH
T ss_pred EcHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccCCCCCHHHHHHHhCCCHHH
Confidence 421 122321110 01111 00 1137888999999999998
Q ss_pred HHHHHhhh
Q 027585 212 ISTIKSKF 219 (221)
Q Consensus 212 v~~l~~~~ 219 (221)
+.++.+++
T Consensus 180 vsR~l~~l 187 (216)
T 4ev0_A 180 VSRVLHAL 187 (216)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877654
No 194
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=77.74 E-value=6.8 Score=29.83 Aligned_cols=52 Identities=10% Similarity=-0.037 Sum_probs=36.9
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEEE
Q 027585 100 NRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMFV 152 (221)
Q Consensus 100 ~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~~ 152 (221)
....+++|...-.- ......+.+|++|.+++...+++|+ .....+.+||.+-
T Consensus 31 ~~~~~~~g~~l~~~-G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~g 83 (194)
T 3dn7_A 31 QLKKVRKKETLLKT-GEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLS 83 (194)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEC
T ss_pred EEEEEcCCCEEECC-CCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEe
Confidence 45567777754222 2234789999999999998877775 3456789999884
No 195
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=77.28 E-value=12 Score=29.70 Aligned_cols=71 Identities=10% Similarity=0.074 Sum_probs=43.7
Q ss_pred EEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEE-EEecCCcEEEECC----CC---eEEEEecCCccEEEE
Q 027585 101 RVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYS-KVLSAGEMFVIPR----GL---IHFQQNVGEGKALAF 172 (221)
Q Consensus 101 ~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~-~~L~~GDv~~~P~----g~---~H~~~N~g~~~a~~l 172 (221)
...+++|...-.- -.....+.+|++|.+++...+.+|+... ..+ +||++-... .. .+...... ++++++
T Consensus 20 ~~~~~~ge~i~~~-G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~-~~~~v~ 96 (238)
T 2bgc_A 20 PKQFHKKELIFNQ-WDPQEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVIS-EQATAY 96 (238)
T ss_dssp CEEEETTCEEECT-TCCCCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECS-SEEEEE
T ss_pred EEEECCCCEEEeC-CCCCceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEE-cceEEE
Confidence 3456666654222 2234789999999999998877776443 445 999874432 22 35555543 456665
Q ss_pred EE
Q 027585 173 TA 174 (221)
Q Consensus 173 ~~ 174 (221)
.+
T Consensus 97 ~i 98 (238)
T 2bgc_A 97 VI 98 (238)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 196
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=77.05 E-value=7 Score=30.81 Aligned_cols=51 Identities=20% Similarity=0.157 Sum_probs=36.9
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEE
Q 027585 100 NRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMF 151 (221)
Q Consensus 100 ~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~ 151 (221)
....+++|...-..-.+ ...+.+|++|.+.+...+.+|+ .....+.+||++
T Consensus 35 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 86 (237)
T 3fx3_A 35 VWRSYDRGETLFLQEEK-AQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESF 86 (237)
T ss_dssp EEEEECTTCEEECTTSC-CCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEE
T ss_pred EEEEECCCCEEEcCCCc-cceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 45567777764332222 4789999999999998877775 345688999987
No 197
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=76.87 E-value=7.4 Score=30.53 Aligned_cols=52 Identities=13% Similarity=0.102 Sum_probs=37.3
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMF 151 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~ 151 (221)
+....+++|...-..-.+ ...+.+|++|.+.+...+++|+ .....+.+||++
T Consensus 29 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~ 81 (231)
T 3e97_A 29 VTERNFQPDELVVEQDAE-GEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVV 81 (231)
T ss_dssp EEEEEECTTCBCCCTTCT-TTCEEEECSSEEEEEEECC--CEEEEEEEESSEEE
T ss_pred cEEEEECCCCEEEeCCCC-CCeEEEEEecEEEEEEECCCCceEEEEecCCCCEE
Confidence 456678888865443333 4789999999999998877665 445789999986
No 198
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=76.64 E-value=7.9 Score=29.74 Aligned_cols=52 Identities=12% Similarity=0.102 Sum_probs=36.9
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEEE
Q 027585 100 NRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMFV 152 (221)
Q Consensus 100 ~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~~ 152 (221)
....+++|...-..--+ ...+.+|++|.+++...+++|+ .....+.+||.+=
T Consensus 20 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 72 (210)
T 3ryp_A 20 HIHKYPSKSTLIHQGEK-AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 72 (210)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred EEEEeCCCCEEECCCCC-CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEee
Confidence 34566777754332222 4789999999999998877775 3456789999873
No 199
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=76.62 E-value=7.3 Score=29.91 Aligned_cols=52 Identities=13% Similarity=0.028 Sum_probs=37.7
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMF 151 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~ 151 (221)
+....+.+|...-.---+ ...+.+|++|.+++...+++|+ .....+.+||++
T Consensus 62 ~~~~~~~~ge~i~~~G~~-~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 62 MQCYAAPRDCQLLTEGDP-GDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred cEEEEeCCCCEEEcCCCC-CCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 445667777754332223 4789999999999998887775 345689999976
No 200
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=75.96 E-value=17 Score=28.28 Aligned_cols=70 Identities=17% Similarity=0.112 Sum_probs=45.2
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEEEECCCCeEEEEecCCccEEEEEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTA 174 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 174 (221)
+....+++|...-..-.+ ...+.+|++|.+.+. .+.+|+ .....+.+||++= ....+..... ++++++.+
T Consensus 23 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~fG--~~~~~~~~A~--~~~~v~~i 93 (222)
T 1ft9_A 23 FRSKIHAKGSLVCTGEGD-ENGVFVVVDGRLRVY-LVGEEREISLFYLTSGDMFC--MHSGCLVEAT--ERTEVRFA 93 (222)
T ss_dssp CEEEEECTTCEEECTTCC-CCCEEEEEESEEEEE-EEETTEEEEEEEEETTCEEE--SCSSCEEEES--SCEEEEEE
T ss_pred CcEEEECCCCEEECCCCC-CCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEec--CCCCEEEEEc--cceEEEEE
Confidence 345667777765332223 378999999999996 555665 3456889999887 3444555553 45555544
No 201
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=75.96 E-value=8.4 Score=30.09 Aligned_cols=50 Identities=24% Similarity=0.382 Sum_probs=35.9
Q ss_pred EEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEE
Q 027585 101 RVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMF 151 (221)
Q Consensus 101 ~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~ 151 (221)
...+++|...-..-.+ ...+.+|++|.+.+...+++|+ .....+.+||++
T Consensus 31 ~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 81 (227)
T 3d0s_A 31 PVDFPRGHTVFAEGEP-GDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMF 81 (227)
T ss_dssp EEEECTTCEEECTTCC-CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEE
T ss_pred EEEeCCCCEEEcCCCc-CCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEE
Confidence 4567777654322222 4789999999999998877665 345689999987
No 202
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=75.95 E-value=3.1 Score=30.30 Aligned_cols=52 Identities=17% Similarity=0.155 Sum_probs=34.3
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMF 151 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~ 151 (221)
+....+++|...-..-.+ ...+.+|++|.+++...+++|+ .....+.+||.+
T Consensus 35 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 35 SDLVNLDKGAYVFRQGEP-AHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTF 87 (154)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESCEEEECCCC-----CCEEECTTEEE
T ss_pred CcEEEecCCCEEecCCCc-cceEEEEEeCEEEEEEECCCCCEEEEEEccCCCee
Confidence 345667777765333233 4789999999999987665554 335688999976
No 203
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=75.56 E-value=2.2 Score=38.11 Aligned_cols=24 Identities=17% Similarity=0.105 Sum_probs=20.9
Q ss_pred EEEEEecCCcEEEECCCCeEEEEe
Q 027585 140 FYSKVLSAGEMFVIPRGLIHFQQN 163 (221)
Q Consensus 140 ~~~~~L~~GDv~~~P~g~~H~~~N 163 (221)
+-...|++||.+++|+|.+|.+..
T Consensus 239 Ln~v~l~pGd~~fipAG~~HAy~~ 262 (394)
T 2wfp_A 239 LNVVKLNPGEAMFLFAETPHAYLQ 262 (394)
T ss_dssp EEEEEECTTCEEEECTTCCEEEEE
T ss_pred heEEECCCCCEEEcCCCCceEcCC
Confidence 446789999999999999999854
No 204
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=75.55 E-value=7.8 Score=30.24 Aligned_cols=52 Identities=15% Similarity=0.109 Sum_probs=37.4
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEEE
Q 027585 100 NRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMFV 152 (221)
Q Consensus 100 ~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~~ 152 (221)
....+++|...-..-.+ ...+.+|++|.+.+...+++|+ .....+.+||++=
T Consensus 35 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 35 HRRRYPTRTDVFRPGDP-AGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVG 87 (230)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred eEEEeCCCCEEECCCCC-CCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEE
Confidence 45567777754332222 4789999999999998877775 3456799999873
No 205
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=74.34 E-value=6.7 Score=31.08 Aligned_cols=118 Identities=8% Similarity=0.032 Sum_probs=69.8
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEEE----ECCC--CeEEEEecCCccEEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMFV----IPRG--LIHFQQNVGEGKALA 171 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~~----~P~g--~~H~~~N~g~~~a~~ 171 (221)
+....+++|...-.--.+ ...+.+|++|.+++...+.+|+ .....+.+||++= +... ..+..... +++++
T Consensus 43 ~~~~~~~~ge~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG~~~~~~~~~~~~~~~~A~--~~~~v 119 (232)
T 1zyb_A 43 LHFIKHKAGETIIKSGNP-CTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAH--TEVHT 119 (232)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEECGGGGSSSCCBCSSEEEES--SCEEE
T ss_pred cEEEEECCCCEEECCCCc-ccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeeeehHHhCCCCCCceEEEEc--cceEE
Confidence 455677787765332223 4789999999999988776664 4456789999772 2222 34455553 44555
Q ss_pred EEEEc-------CCCCeeee----------------------------ccchhhc--CC------CCCCHHHHHhhcCCC
Q 027585 172 FTAFN-------SHLPGAVI----------------------------VPTTLFA--ST------PSVPNQVLTKTFQVD 208 (221)
Q Consensus 172 l~~~~-------s~~pg~~~----------------------------~~~~lf~--~~------p~~~~~vla~~f~l~ 208 (221)
+.+-. ..+|.... ++..+.. .. -+++.+-||...|++
T Consensus 120 ~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~t~~~lA~~lG~s 199 (232)
T 1zyb_A 120 VCISKAFVLSDLFRYDIFRLNYMNIVSNRAQNLYSRLWDEPTLDLKSKIIRFFLSHCEKPQGEKTFKVKMDDLARCLDDT 199 (232)
T ss_dssp EEEEHHHHHHTGGGSHHHHHHHHHHHHHHHHHHHHHTTSCCCCSHHHHHHHHHHTTCSSSSSCEEEECCHHHHHHHHTSC
T ss_pred EEEEHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHhhcCCeEEecCCHHHHHHHhCCC
Confidence 54421 12332111 0011110 00 137889999999999
Q ss_pred HHHHHHHHhhh
Q 027585 209 DDLISTIKSKF 219 (221)
Q Consensus 209 ~~~v~~l~~~~ 219 (221)
++.+.++.+.+
T Consensus 200 r~tvsR~l~~l 210 (232)
T 1zyb_A 200 RLNISKTLNEL 210 (232)
T ss_dssp HHHHHHHHHHH
T ss_pred hhHHHHHHHHH
Confidence 99888877654
No 206
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=74.11 E-value=7.2 Score=29.90 Aligned_cols=35 Identities=14% Similarity=0.060 Sum_probs=28.0
Q ss_pred CcEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEEE
Q 027585 118 ASESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMFV 152 (221)
Q Consensus 118 a~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~~ 152 (221)
...+.+|++|.+.+...+.+|+ .....+.+||++=
T Consensus 17 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G 52 (195)
T 3b02_A 17 ARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFG 52 (195)
T ss_dssp CCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEec
Confidence 3679999999999998877665 4456899999873
No 207
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=74.01 E-value=7.3 Score=30.20 Aligned_cols=117 Identities=9% Similarity=0.056 Sum_probs=68.7
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEEEEC-----CC--CeEEEEecCCccEEE
Q 027585 100 NRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMFVIP-----RG--LIHFQQNVGEGKALA 171 (221)
Q Consensus 100 ~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~~~P-----~g--~~H~~~N~g~~~a~~ 171 (221)
....+++|...-..-.+ ...+.+|++|.+.+...+++|+ .....+.+||.+.+. .+ ..+.... .+++++
T Consensus 27 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~a--~~~~~~ 103 (220)
T 3dv8_A 27 ITQHVKKGTIIHNGNMD-CTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLLSASCIMRSIQFEVTIEA--EKDTDL 103 (220)
T ss_dssp EEEEECTTCEEEEGGGC-CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESGGGGGGCTTCCCCCEEEE--SSCEEE
T ss_pred ceEEeCCCCEEECCCCC-cceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeehhHHHHhCCCCCceEEEE--eeeeEE
Confidence 44567777754322222 4789999999999998877775 345678999985321 22 2333443 345555
Q ss_pred EEEEc-------CCCCeeeec----------------------------cch------hhcC-CCCCCHHHHHhhcCCCH
Q 027585 172 FTAFN-------SHLPGAVIV----------------------------PTT------LFAS-TPSVPNQVLTKTFQVDD 209 (221)
Q Consensus 172 l~~~~-------s~~pg~~~~----------------------------~~~------lf~~-~p~~~~~vla~~f~l~~ 209 (221)
+.+-. ..+|..... +.. ..+. .-+++.+-+|..+|+++
T Consensus 104 ~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~sr 183 (220)
T 3dv8_A 104 WIIPAEIYKGIMKDSAPVANYTNELMATRFSDVMWLIEQIMWKSLDKRVASFLLEETSIEGTNELKITHETIANHLGSHR 183 (220)
T ss_dssp EEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTSSEECCCHHHHHHHHTCCH
T ss_pred EEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcCCceecCCHHHHHHHhCCCH
Confidence 55421 122321110 000 0110 01478889999999999
Q ss_pred HHHHHHHhhh
Q 027585 210 DLISTIKSKF 219 (221)
Q Consensus 210 ~~v~~l~~~~ 219 (221)
+.+.++.+.+
T Consensus 184 ~tvsR~l~~L 193 (220)
T 3dv8_A 184 EVITRMLRYF 193 (220)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9988877654
No 208
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=73.82 E-value=25 Score=27.15 Aligned_cols=115 Identities=12% Similarity=0.153 Sum_probs=69.0
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEEc-
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAFN- 176 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~- 176 (221)
+....+++|...-.--.+ ...+.+|++|.+.+. .+.+|+ .....+.+||++=. ...+..... +++.++.+-.
T Consensus 27 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~~G~--~~~~~~~A~--~~~~v~~i~~~ 100 (220)
T 2fmy_A 27 FREQRYSKKAILYTPNTE-RNLVFLVKSGRVRVY-LAYEDKEFTLAILEAGDIFCT--HTRAFIQAM--EDTTILYTDIR 100 (220)
T ss_dssp SEEEEECTTCEEECTTCS-SCEEEEEEESEEEEE-EECSSCEEEEEEEETTCEEES--CSSSEEEES--SSEEEEEEEHH
T ss_pred hheeEeCCCCEEECCCCC-CCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEeCC--ccceEEEEc--CcEEEEEEeHH
Confidence 345667777765332223 478999999999994 555564 44578899998765 233445543 4555555421
Q ss_pred ------CCCCeeeec----------------------------cchh------hc--------CCCCCCHHHHHhhcCCC
Q 027585 177 ------SHLPGAVIV----------------------------PTTL------FA--------STPSVPNQVLTKTFQVD 208 (221)
Q Consensus 177 ------s~~pg~~~~----------------------------~~~l------f~--------~~p~~~~~vla~~f~l~ 208 (221)
.++|..... +..+ ++ -..+++.+-+|...|++
T Consensus 101 ~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~g~~~~~~~~~~~~~t~~~lA~~lg~s 180 (220)
T 2fmy_A 101 NFQNIVVEFPAFSLNMVKVLGDLLKNSLTIINGLVFKDARLRLAEFLVQAAMDTGLKVPQGIKLELGLNTEEIALMLGTT 180 (220)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCEEETTEEEEECSSCHHHHHHHHTSC
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCCCCCcEEEeccCCHHHHHHHhCCc
Confidence 123321110 0000 01 01148889999999999
Q ss_pred HHHHHHHHhhh
Q 027585 209 DDLISTIKSKF 219 (221)
Q Consensus 209 ~~~v~~l~~~~ 219 (221)
++.+.++.+.+
T Consensus 181 r~tvsR~l~~l 191 (220)
T 2fmy_A 181 RQTVSVLLNDF 191 (220)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988877665
No 209
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=73.82 E-value=6.6 Score=30.25 Aligned_cols=49 Identities=16% Similarity=0.205 Sum_probs=34.7
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMF 151 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~ 151 (221)
+....+.||...-..-.+ ...+.+|++|++.+.. ++|+ ....+.+||.+
T Consensus 94 ~~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~~~~--~~g~-~~~~l~~G~~f 142 (198)
T 2ptm_A 94 LEFEVFQPADYVIQEGTF-GDRMFFIQQGIVDIIM--SDGV-IATSLSDGSYF 142 (198)
T ss_dssp CEEEEECTTCEEECTTSC-CSEEEEEEECCEEEEC--TTSC-EEEEECTTCEE
T ss_pred ccceeeCCCCEEEECCCc-CcEEEEEEeCEEEEEe--cCCe-EEEEecCCCEe
Confidence 455677788764332223 4789999999999875 4455 46789999976
No 210
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=72.66 E-value=7.3 Score=32.63 Aligned_cols=51 Identities=16% Similarity=0.130 Sum_probs=37.5
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEE
Q 027585 100 NRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMF 151 (221)
Q Consensus 100 ~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~ 151 (221)
....+++|...-.--.+ ...+.+|++|.+++...+.+|+.....+.+||.+
T Consensus 37 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~f 87 (333)
T 4ava_A 37 QPLRAAAGQVLLRQGEP-AVSFLLISSGSAEVSHVGDDGVAIIARALPGMIV 87 (333)
T ss_dssp EEEEECTTCEEECTTSB-CCCEEEEEECCEEEEEECTTCCEEEEEECTTCEE
T ss_pred eEEEECCCCEEEeCCCc-CCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEe
Confidence 45567777653222222 3779999999999998887777677889999986
No 211
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=72.57 E-value=11 Score=30.55 Aligned_cols=51 Identities=12% Similarity=0.125 Sum_probs=37.6
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEE
Q 027585 100 NRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMF 151 (221)
Q Consensus 100 ~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~ 151 (221)
....+++|...-.---+ ...+.+|++|.+++...+.+|+ .....+.+||++
T Consensus 70 ~~~~~~~ge~i~~~G~~-~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~ 121 (260)
T 3kcc_A 70 HIHKYPSKSTLIHQGEK-AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFI 121 (260)
T ss_dssp EEEEECTTCEEECTTCB-CCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEE
T ss_pred EEEEECCCCEEECCCCc-CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEE
Confidence 45677888765332223 4789999999999998877775 346788999987
No 212
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=71.87 E-value=10 Score=30.23 Aligned_cols=52 Identities=13% Similarity=0.086 Sum_probs=38.1
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMF 151 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~ 151 (221)
+....+++|...-.---+ ...+.+|++|.+++...+++|+ .....+.+||++
T Consensus 43 ~~~~~~~~ge~i~~~G~~-~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~ 95 (243)
T 3la7_A 43 PVVETFERNKTIFFPGDP-AERVYFLLKGAVKLSRVYEAGEEITVALLRENSVF 95 (243)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEE
T ss_pred heeEEECCCCEEEcCCCC-CceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEE
Confidence 446677888765333223 4789999999999998887775 345678999976
No 213
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=71.62 E-value=6.7 Score=30.82 Aligned_cols=118 Identities=10% Similarity=0.023 Sum_probs=66.6
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEEEE-----CCCCeEEEEecCCccEEEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMFVI-----PRGLIHFQQNVGEGKALAF 172 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~~~-----P~g~~H~~~N~g~~~a~~l 172 (221)
.....+++|...-..-.+ ...+.+|++|.+.+...+++|+ .....+.+||++=. .....+..... +++.++
T Consensus 33 ~~~~~~~~g~~i~~~g~~-~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~--~~~~v~ 109 (232)
T 2gau_A 33 IQPFPCKKASTVFSEGDI-PNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGMRPYFAEETCSSTAIAV--ENSKVL 109 (232)
T ss_dssp CEEEEECTTCEEECTTCC-CCEEEEEEESCEEEEC-----CCCEEEEECTTCEESHHHHHHTSCCSSEEEES--SCEEEE
T ss_pred CeEEEECCCCEEEeCCCC-CCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeeeehhhCCCCcceEEEEe--cceEEE
Confidence 355677787764332223 4789999999999987766554 44678999998721 11233444443 445555
Q ss_pred EEEc-------CCCCeeee----------------------------ccchh------hc-------CCCCCCHHHHHhh
Q 027585 173 TAFN-------SHLPGAVI----------------------------VPTTL------FA-------STPSVPNQVLTKT 204 (221)
Q Consensus 173 ~~~~-------s~~pg~~~----------------------------~~~~l------f~-------~~p~~~~~vla~~ 204 (221)
.+-. ..+|.... ++..+ ++ -..+++.+-+|..
T Consensus 110 ~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~ 189 (232)
T 2gau_A 110 AIPVEAIEALLKGNTSFCRYFLKALAKELGYAERRTVTLTQKHVRGRLAETLLILKENFGFENDGATLSIYLSREELATL 189 (232)
T ss_dssp EEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHCBCTTSSBBSCCCCHHHHHHH
T ss_pred EEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCcEEEcccCHHHHHHH
Confidence 4421 12222110 01111 11 0125889999999
Q ss_pred cCCCHHHHHHHHhhh
Q 027585 205 FQVDDDLISTIKSKF 219 (221)
Q Consensus 205 f~l~~~~v~~l~~~~ 219 (221)
.|++++.+.++.+.+
T Consensus 190 lg~sr~tvsR~l~~l 204 (232)
T 2gau_A 190 SNMTVSNAIRTLSTF 204 (232)
T ss_dssp TTSCHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHH
Confidence 999999998887665
No 214
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=71.50 E-value=8.5 Score=30.00 Aligned_cols=52 Identities=13% Similarity=0.227 Sum_probs=37.3
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMF 151 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~ 151 (221)
+....+++|...-..-.+ ...+.+|++|.+++...+++|+ .....+.+||++
T Consensus 22 ~~~~~~~~g~~i~~~G~~-~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 74 (213)
T 1o5l_A 22 GKVIVFRKGEIVKHQDDP-IEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQII 74 (213)
T ss_dssp SEEEEECTTCEEECTTCB-CCEEEEEEESCEEEEEECTTSCEEEEEEECSSEES
T ss_pred cEEEEECCCCEEEcCCCc-cceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEe
Confidence 345667777765333233 3789999999999998877775 345678999976
No 215
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=69.37 E-value=8.2 Score=29.86 Aligned_cols=48 Identities=21% Similarity=0.197 Sum_probs=32.9
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMF 151 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~ 151 (221)
+....+.||..+-..-.+ ...+.+|++|.+.+.. .+|+ ...+.+||++
T Consensus 95 ~~~~~~~~ge~I~~~g~~-~~~ly~I~~G~v~v~~--~~g~--~~~l~~G~~f 142 (202)
T 3bpz_A 95 LKFEVFQPGDYIIREGTI-GKKMYFIQHGVVSVLT--KGNK--EMKLSDGSYF 142 (202)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECEEEEEC--TTSC--CEEEETTCEE
T ss_pred CCceEECCCCEEEECCCc-CCeEEEEeccEEEEEE--CCCe--EEEEcCCCEe
Confidence 345677788765333233 3789999999999853 3455 3478999976
No 216
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=69.35 E-value=13 Score=29.70 Aligned_cols=52 Identities=12% Similarity=0.075 Sum_probs=37.1
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeE-EEEEecCCcEEE
Q 027585 100 NRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVF-YSKVLSAGEMFV 152 (221)
Q Consensus 100 ~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~-~~~~L~~GDv~~ 152 (221)
....+++|...-.---+ ...+.+|++|.+++...+++|+. ....+.+||++=
T Consensus 33 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G 85 (250)
T 3e6c_C 33 LIRDFAKGSAVIMPGEE-ITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIG 85 (250)
T ss_dssp EEEEECTTCEEECTTCC-CCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred eEEEECCCCEEECCCCC-CCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEe
Confidence 45567777754332223 37899999999999988777753 456789999873
No 217
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=68.54 E-value=4 Score=37.05 Aligned_cols=22 Identities=18% Similarity=0.090 Sum_probs=19.9
Q ss_pred EEEecCCcEEEECCCCeEEEEe
Q 027585 142 SKVLSAGEMFVIPRGLIHFQQN 163 (221)
Q Consensus 142 ~~~L~~GDv~~~P~g~~H~~~N 163 (221)
...|++||.+++|+|.+|.+..
T Consensus 267 ~v~L~pGea~flpAg~~HAYl~ 288 (440)
T 1pmi_A 267 HVGLNKGEAMFLQAKDPHAYIS 288 (440)
T ss_dssp EEEECTTCEEEECTTCCEEEEE
T ss_pred eEecCCCCEEecCCCCccccCC
Confidence 5679999999999999999865
No 218
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=68.38 E-value=46 Score=26.93 Aligned_cols=110 Identities=15% Similarity=0.156 Sum_probs=67.6
Q ss_pred EEEEEEEcCCC-cCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecC----Cc--EEEECCCCeEEEEec-CCccE
Q 027585 98 SMNRVDFAPGG-LNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSA----GE--MFVIPRGLIHFQQNV-GEGKA 169 (221)
Q Consensus 98 s~~~v~l~Pgg-~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~----GD--v~~~P~g~~H~~~N~-g~~~a 169 (221)
+....-+.++. ...||.- +++|+.+--.|.....+..++|+..+.+|.+ |+ -++||+|.....+.. +++..
T Consensus 80 TaIYfLL~~~~~~S~wHRv-~sdEiW~~h~G~p~~~li~~dg~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~~~~~~~ 158 (203)
T 1xe7_A 80 TLIYYLLTPDSPIGKFHKN-INRIIHILQRGKGQYVLVYPDGQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLLPNEEFD 158 (203)
T ss_dssp EEEEEEEBTTBCEEEEEEE-SSCEEEEEEEECEEEEEECTTSCEEEEEESSCGGGTCBSEEEECTTCEEEEEECCCTTTT
T ss_pred eEEEEEEcCCCCcccceee-CCCEEEEEEcCCccEEEEcCCCCEEEEEeCCCcccCcccEEEEcCCEEEEeEecCCCCcc
Confidence 45555677775 4666654 5799999999966555666777766777654 55 479999999988764 33221
Q ss_pred --EEEEEEcCCCCeeeeccchhhcCCCCCCHH-HHHhhcCCCHHHHHHHHhh
Q 027585 170 --LAFTAFNSHLPGAVIVPTTLFASTPSVPNQ-VLTKTFQVDDDLISTIKSK 218 (221)
Q Consensus 170 --~~l~~~~s~~pg~~~~~~~lf~~~p~~~~~-vla~~f~l~~~~v~~l~~~ 218 (221)
.+++..- .||+..-...+ .+.+ -|.+.|. ++.++.|+-.
T Consensus 159 ~~tLVgCtV--aPGFdF~dFel------~~~~~~L~~~~P--~~~~~~l~~l 200 (203)
T 1xe7_A 159 NGFLISEVV--VPGFDFEDHTF------LKGEDELKHLVG--PEKAAELAFL 200 (203)
T ss_dssp TCEEEEEEE--SSCCCGGGEEE------CCHHHHHHHHHC--HHHHHHTGGG
T ss_pred cceEEEEEe--cCCccchhcEe------cCCcHHHHHHCC--HHHHHHHHHH
Confidence 3333332 35554443333 3444 4555554 7777776543
No 219
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=67.80 E-value=11 Score=27.66 Aligned_cols=48 Identities=19% Similarity=0.234 Sum_probs=33.1
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMF 151 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~ 151 (221)
+....+.+|...-.--.+ ...+.+|++|.+.+... |+ ....+.+||.+
T Consensus 61 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~---~~-~~~~~~~G~~f 108 (154)
T 3pna_A 61 MFPVSFIAGETVIQQGDE-GDNFYVIDQGEMDVYVN---NE-WATSVGEGGSF 108 (154)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEESCEEEEET---TE-EEEEECTTCEE
T ss_pred ceEEEECCCCEEEeCCCC-CCeEEEEEecEEEEEEC---CE-EEEEecCCCEe
Confidence 345677777764322223 48899999999999863 33 35678999975
No 220
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=66.38 E-value=16 Score=29.69 Aligned_cols=52 Identities=21% Similarity=0.254 Sum_probs=37.4
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCC--eEEEEEecCCcEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNN--VFYSKVLSAGEMF 151 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~--~~~~~~L~~GDv~ 151 (221)
+....+.+|...-..-.+ +..+.+|++|++.+.....+| ......+.+||.+
T Consensus 180 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 180 LEPVQFEDGQKIVVQGEP-GDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEE
T ss_pred cEEEEECCCCEEEeCCcc-CCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEe
Confidence 456677888765433333 478999999999998765544 2456789999987
No 221
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=65.95 E-value=12 Score=27.23 Aligned_cols=48 Identities=25% Similarity=0.235 Sum_probs=32.3
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEE
Q 027585 100 NRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFV 152 (221)
Q Consensus 100 ~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~ 152 (221)
....+.+|...-.- ......+.+|++|.+++...+ .....+.+||.+=
T Consensus 51 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~----~~~~~~~~G~~fG 98 (160)
T 4f8a_A 51 QTVHCAPGDLIYHA-GESVDSLCFVVSGSLEVIQDD----EVVAILGKGDVFG 98 (160)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEETT----EEEEEEETTCEEE
T ss_pred eeeeeCCCCEEEeC-CCCccEEEEEEeeEEEEEECC----EEEEEecCCCEeC
Confidence 34566677654222 222489999999999997632 2467899999764
No 222
>1xsq_A Ureidoglycolate hydrolase; northeast structural genomics consortium, NESG, structural genomics, protein structure initiative, PSI, ET81, X-RAY; 1.60A {Escherichia coli} SCOP: b.82.1.14 PDB: 1xsr_A 1yqc_A
Probab=65.28 E-value=12 Score=29.46 Aligned_cols=63 Identities=14% Similarity=0.125 Sum_probs=46.6
Q ss_pred CCCCCCCcEEEEEEeCEEEEEEEecC------CeEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEE
Q 027585 112 PHSHPRASESGIVIKGKLLVGFFTTN------NVFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTA 174 (221)
Q Consensus 112 ~H~Hp~a~Ei~yVl~G~~~v~~~~~~------~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 174 (221)
+-.|+..+|.+.-+.|...+-++.++ ++...+...+|+.+.+-+|++|...-.-+++..++.+
T Consensus 71 lERHp~~sQafiPl~~~~~lVvVA~~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~~F~vv 139 (168)
T 1xsq_A 71 LERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTI 139 (168)
T ss_dssp EEECTTBCEEEEESBCCCCEEEEEECSSSCEEEEEEEEECCSSCEEEECTTCEECCCCBSSSCEEEEEE
T ss_pred EeeCCCCceEEEECCCCEEEEEEeCCCCCCChhheEEEEecCCeEEEeCCCceecccccCCCcceEEEE
Confidence 34588889999999998665554443 2566899999999999999999864443455666644
No 223
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=64.58 E-value=14 Score=26.34 Aligned_cols=47 Identities=17% Similarity=0.150 Sum_probs=32.0
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEE
Q 027585 100 NRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMF 151 (221)
Q Consensus 100 ~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~ 151 (221)
....+.+|...-.- -.....+.+|++|.+++.- +|+ ....+.+||.+
T Consensus 47 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~---~g~-~~~~~~~G~~f 93 (139)
T 3ocp_A 47 YPVEYGKDSCIIKE-GDVGSLVYVMEDGKVEVTK---EGV-KLCTMGPGKVF 93 (139)
T ss_dssp EEEEECSSCEEECT-TSCCCEEEEEEECCEEEEE---TTE-EEEEECTTCEE
T ss_pred EEEecCCCCEEEeC-CCcCCEEEEEEeCEEEEEE---CCE-EEEEeCCCCEe
Confidence 45667777754322 2234889999999999843 344 46788999976
No 224
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=64.03 E-value=12 Score=32.07 Aligned_cols=54 Identities=13% Similarity=0.104 Sum_probs=37.9
Q ss_pred CCCcEEEE-EEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEEEEe-c-CCccEEEEEEE
Q 027585 116 PRASESGI-VIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHFQQN-V-GEGKALAFTAF 175 (221)
Q Consensus 116 p~a~Ei~y-Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N-~-g~~~a~~l~~~ 175 (221)
.+ .|+.+ .+.|.+++.++++ ++.|..-|.+++|+|....... . +..++++....
T Consensus 77 ~~-rE~~iV~l~G~~~V~vdG~-----~f~lg~~dalYVp~g~~~v~~as~da~~~a~fav~s 133 (282)
T 1xru_A 77 ER-RELGVINIGGAGTITVDGQ-----CYEIGHRDALYVGKGAKEVVFASIDTGTPAKFYYNC 133 (282)
T ss_dssp TT-EEEEEEECSSCEEEEETTE-----EEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEEE
T ss_pred CC-cEEEEEEccCeEEEEECCE-----EEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEc
Confidence 44 66655 4589999998876 7899999999999998644443 3 23456554433
No 225
>2bdr_A Ureidoglycolate hydrolase; all beta protein, structural genomics, PSI, protein structur initiative, northeast structural genomics consortium; 1.60A {Pseudomonas putida} SCOP: b.82.1.14
Probab=61.92 E-value=17 Score=28.77 Aligned_cols=65 Identities=14% Similarity=0.035 Sum_probs=47.0
Q ss_pred CCCCCCCCcEEEEEEeCEEEEEEEecCC------eEEEEEecCCcEEEECCCCeEEEEecCCccEEEEEEE
Q 027585 111 PPHSHPRASESGIVIKGKLLVGFFTTNN------VFYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTAF 175 (221)
Q Consensus 111 ~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~------~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 175 (221)
.+-.|+..+|.+.-+.|...+-++..++ +...+....|+.+.+-+|++|...-.-+++..++.+-
T Consensus 72 ~lERHp~~sQafiPl~~~~~lVvVAp~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~dF~vvd 142 (175)
T 2bdr_A 72 MLERHPLGSQAFIPLLGNPFLIVVAPVGDAPVSGLVRAFRSNGRQGVNYHRGVWHHPVLTIEKRDDFLVVD 142 (175)
T ss_dssp EEEECTTBCEEEEESSCCCEEEEEECSSSSCCGGGCEEEEECSSCEEEECTTCEECSCEESSSEEEEEEEE
T ss_pred EEeeCCCCceEEEECCCCEEEEEEeCCCCCCCccceEEEEeCCCeEEEeCCCceecccccCCCCceEEEEE
Confidence 3446888899999999986555554432 5678999999999999999996544334455555443
No 226
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=61.43 E-value=9.7 Score=27.11 Aligned_cols=48 Identities=13% Similarity=0.156 Sum_probs=31.8
Q ss_pred EEEEEEc-CCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEE
Q 027585 99 MNRVDFA-PGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMF 151 (221)
Q Consensus 99 ~~~v~l~-Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~ 151 (221)
+....+. +|...-.- ......+.+|++|.+++.. .+|+. ..+.+||.+
T Consensus 39 ~~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~--~~g~~--~~l~~G~~f 87 (134)
T 2d93_A 39 MIFEVVEQAGAIILED-GQELDSWYVILNGTVEISH--PDGKV--ENLFMGNSF 87 (134)
T ss_dssp EEEEEECSSSCEEECT-TCEECEEEECCBSCEEEEC--SSSCE--EEECTTCEE
T ss_pred heEEEecCCCCEEEeC-CCCCCeEEEEEeCEEEEEc--CCCcE--EEecCCCcc
Confidence 3455666 66654222 2234778999999999873 45664 668999966
No 227
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=61.30 E-value=11 Score=30.37 Aligned_cols=88 Identities=15% Similarity=0.161 Sum_probs=48.2
Q ss_pred cCCeEEecccCCCCcccCCeeEEEeeccccCCCcccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe
Q 027585 60 SGDFFFDGLSKEGNTTIFGSAVTPANVLAFPGVNTLGISMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV 139 (221)
Q Consensus 60 ~~df~~~~l~~~~~~~~~g~~v~~~~~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~ 139 (221)
-+.|.|+|-..- .....++.++-.|...=++.-. ..+..+.+. +... .+.+. ..-++|+++|++.+...+.
T Consensus 88 ~~p~~F~G~~~v-~a~L~~G~~~DfNlM~rr~~~~--~~v~~~~~~-~~~~-~~~~~-~~~~v~~l~G~~~v~~~~~--- 158 (200)
T 1yll_A 88 RQAFAFSGDSEV-HCTLLDGAIRDFNLIYAPRRHR--ARLQWLRVE-GELD-WHGTA-STLLLFAQQDGVAISLQGQ--- 158 (200)
T ss_dssp TCCEEEETTSCE-EEEESSSCEEEEEEEECTTTEE--EEEEEEEEE-EEEE-EEECC-SEEEEEESSSCEEEEETTE---
T ss_pred CCcEEeCCCCcE-EEEECCCCEEEEEEEEcCCccE--EEEEEEecC-CCee-EcCCC-CEEEEEEccCcEEEEcCCC---
Confidence 355777764321 0123345566666555444221 122222322 1111 11122 2689999999999876421
Q ss_pred EEEEEecCCcEEEECCCC
Q 027585 140 FYSKVLSAGEMFVIPRGL 157 (221)
Q Consensus 140 ~~~~~L~~GDv~~~P~g~ 157 (221)
....|.+||.+.+....
T Consensus 159 -~~~~L~~~d~l~~~~~~ 175 (200)
T 1yll_A 159 -PRGQLAAHDCLCAEGLQ 175 (200)
T ss_dssp -EEEEECTTCEEEEESCC
T ss_pred -ceeecCCCCEEEEeCCC
Confidence 27899999999987654
No 228
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=59.89 E-value=24 Score=31.03 Aligned_cols=51 Identities=8% Similarity=-0.060 Sum_probs=36.3
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCC-eEEEEEecCCcEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNN-VFYSKVLSAGEMF 151 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~-~~~~~~L~~GDv~ 151 (221)
+....+.+|..+-..-.+ ...+.+|++|.+.+... .+| ......+.+||++
T Consensus 168 ~~~~~~~~Ge~I~~qGd~-~d~~YiI~sG~v~v~~~-~~G~~~~v~~l~~G~~f 219 (416)
T 3tnp_B 168 MFEKLVKEGEHVIDQGDD-GDNFYVIDRGTFDIYVK-CDGVGRCVGNYDNRGSF 219 (416)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEECEEEEEEE-CSSCEEEEEEEESCCEE
T ss_pred cEEEEeCCCCEEEeCCCC-CceEEEEEeeEEEEEEe-cCCCEEEEEEecCCCEE
Confidence 455677888765443334 38999999999999884 344 3446789999966
No 229
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=59.76 E-value=13 Score=28.95 Aligned_cols=49 Identities=18% Similarity=0.137 Sum_probs=34.0
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFV 152 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~ 152 (221)
+....+.||...-.---+ ...+.+|++|++.+... | .....+.+||.+=
T Consensus 98 ~~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~v~~~---~-~~~~~l~~G~~fG 146 (212)
T 3ukn_A 98 IKTSFCAPGEFLIRQGDA-LQAIYFVCSGSMEVLKD---N-TVLAILGKGDLIG 146 (212)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECCEEEESS---S-CEEEEECTTCEEE
T ss_pred hheEEeCCCCEEEECCCc-ccEEEEEEecEEEEEEC---C-eEEEEecCCCCcC
Confidence 445677888764332223 48999999999998753 2 2467899999773
No 230
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=59.67 E-value=17 Score=31.92 Aligned_cols=53 Identities=17% Similarity=0.006 Sum_probs=38.1
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe---EEEEEecCCcEEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV---FYSKVLSAGEMFV 152 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~---~~~~~L~~GDv~~ 152 (221)
+....+++|...-.- ......+.+|++|.+.+...+.+|+ .....+.+||++=
T Consensus 65 ~~~~~~~~g~~i~~~-Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fG 120 (469)
T 1o7f_A 65 GYYENLEKGITLFRQ-GDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFG 120 (469)
T ss_dssp CEEEEECTTCEEECT-TSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEEC
T ss_pred ceEEEECCCCEEEeC-CCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcc
Confidence 345577777754322 2234789999999999998877663 5678899999873
No 231
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=57.11 E-value=21 Score=27.21 Aligned_cols=70 Identities=13% Similarity=0.108 Sum_probs=42.6
Q ss_pred EEEcCCCcCCCCCCCCC--cEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEEEE----CCCCeEEEEecCCccEEEEEE
Q 027585 102 VDFAPGGLNPPHSHPRA--SESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMFVI----PRGLIHFQQNVGEGKALAFTA 174 (221)
Q Consensus 102 v~l~Pgg~~~~H~Hp~a--~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~~~----P~g~~H~~~N~g~~~a~~l~~ 174 (221)
..+++|...-.. .... ..+.+|++|.+.+...+.+|+ .....+.+||++=. .....+..... ++++++.+
T Consensus 8 ~~~~~g~~i~~~-g~~~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~--~~~~v~~i 84 (202)
T 2zcw_A 8 VSFKAGDVILYP-GVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEAA--TDVRLEPL 84 (202)
T ss_dssp EEECTTCEEECS-BSCCTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEES--SCEEEEEC
T ss_pred EEECCCCEEECC-CCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEEc--ccEEEEEE
Confidence 456666643221 1223 568999999999998877765 34567999997732 22233444443 45555555
No 232
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=55.10 E-value=36 Score=30.04 Aligned_cols=72 Identities=17% Similarity=0.084 Sum_probs=52.1
Q ss_pred EEEecC---------CcEEEECCCCeEEEEecCCccEEEEEEEcCCCCe-----------------------eee----c
Q 027585 142 SKVLSA---------GEMFVIPRGLIHFQQNVGEGKALAFTAFNSHLPG-----------------------AVI----V 185 (221)
Q Consensus 142 ~~~L~~---------GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg-----------------------~~~----~ 185 (221)
..+|++ ||+++-|+-.+|.+.-.++.|+++++.-...+-. ... +
T Consensus 156 wr~l~~~~~~~~w~~gdsyveps~cphty~l~~d~parivsyt~~s~l~~l~~e~n~w~~~a~e~~l~~l~~~~aagv~L 235 (443)
T 3g7d_A 156 WRVLHANHGGDRWITGDSYVEPSYCPHSYSLAGDAPARIVSYTAQSNISPLMTEANNWSTGAFEEALKALSGKVSAGSVL 235 (443)
T ss_dssp EEEECBCCSSCTTSCBCEEEECTTCCCEEEESSSSCEEEEEEECCCTTHHHHHHHTTSCHHHHHHHHHHHSSCCCHHHHH
T ss_pred heeeccCCCCCccccCCcccccccCCcccccccCCchheEeeccccchHHHHHhhcccccHHHHHHHHhhcccchHHHHH
Confidence 567787 9999999999999999999999999865444310 000 0
Q ss_pred cchhhcCCCCCCHHHHHhhcCCCHHHHHHH
Q 027585 186 PTTLFASTPSVPNQVLTKTFQVDDDLISTI 215 (221)
Q Consensus 186 ~~~lf~~~p~~~~~vla~~f~l~~~~v~~l 215 (221)
...+-.. +++.+-||+..|++++.+..+
T Consensus 236 R~ar~Re--glTQ~~LAe~TGIPq~hISeM 263 (443)
T 3g7d_A 236 DLFLARR--AHTRTSAAEAAGVPPADLEAA 263 (443)
T ss_dssp HHHHHHT--TCCHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHhc--CCCHHHHHHHhCCCHHHHHHH
Confidence 0112222 588999999999998887654
No 233
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=54.42 E-value=13 Score=26.32 Aligned_cols=45 Identities=18% Similarity=0.237 Sum_probs=30.9
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEE
Q 027585 100 NRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMF 151 (221)
Q Consensus 100 ~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~ 151 (221)
....+++|...-..-.+ ...+.+|++|.+++...+ ...+.+||.+
T Consensus 35 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~------~~~~~~G~~~ 79 (138)
T 1vp6_A 35 RARTVPAGAVICRIGEP-GDRMFFVVEGSVSVATPN------PVELGPGAFF 79 (138)
T ss_dssp EEEEECTTCEEECTTSC-CCEEEEEEESCEEECSSS------CEEECTTCEE
T ss_pred cEEEeCCCCEEEeCCCC-cceEEEEEeeEEEEEeCC------cceECCCCEe
Confidence 45677787765333233 478999999999986543 2478888875
No 234
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=54.18 E-value=13 Score=29.16 Aligned_cols=47 Identities=13% Similarity=0.016 Sum_probs=32.5
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEE
Q 027585 100 NRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMF 151 (221)
Q Consensus 100 ~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~ 151 (221)
....+++|...-.--.+ +..+.+|++|.+.+...+ +. ...+.+||.+
T Consensus 31 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~v~~~~---~~-~~~~~~g~~f 77 (246)
T 3of1_A 31 EEKSVPKGATIIKQGDQ-GDYFYVVEKGTVDFYVND---NK-VNSSGPGSSF 77 (246)
T ss_dssp EEEEECTTCEEECTTCC-CCEEEEEEECCEEEESTT---SC-CEEECTTCEE
T ss_pred ceEEECCCCEEEecCCC-CCEEEEEEeeEEEEEECC---EE-EEecCCCCee
Confidence 45566777754332233 489999999999987533 22 4789999987
No 235
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=54.00 E-value=20 Score=29.00 Aligned_cols=48 Identities=19% Similarity=0.234 Sum_probs=34.0
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMF 151 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~ 151 (221)
+....+++|...-..-.+ ...+.+|++|++.+... |+ ....+.+||.+
T Consensus 62 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~---g~-~~~~l~~G~~f 109 (291)
T 2qcs_B 62 MFPVSFIAGETVIQQGDE-GDNFYVIDQGEMDVYVN---NE-WATSVGEGGSF 109 (291)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECCEEEEET---TE-EEEEECTTCEE
T ss_pred ccEEEECCCCEEEeCCCC-CceEEEEeeeEEEEEEC---Ce-EEEEcCCCCcc
Confidence 345667777765333233 48899999999999873 33 36789999976
No 236
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=52.66 E-value=23 Score=30.91 Aligned_cols=35 Identities=26% Similarity=0.454 Sum_probs=27.9
Q ss_pred EEEEEecCCcEEEECCCCeEEEEecCCccEEEEEE
Q 027585 140 FYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAFTA 174 (221)
Q Consensus 140 ~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 174 (221)
++..+=++||.+++++|..|+..|.|-.-.+..-+
T Consensus 278 vyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~awN~ 312 (332)
T 2xxz_A 278 VYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNV 312 (332)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEE
T ss_pred eEEEEECCCCEEEECCCceEEEEecceeeEEEEEe
Confidence 44788899999999999999999998754444333
No 237
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=52.13 E-value=26 Score=28.61 Aligned_cols=52 Identities=21% Similarity=0.303 Sum_probs=36.3
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEe-cCCe-EEEEEecCCcEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFT-TNNV-FYSKVLSAGEMF 151 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~-~~~~-~~~~~L~~GDv~ 151 (221)
+....+.+|..+-.-- ..+..+.+|++|++.+...+ .+|+ .....+.+||.+
T Consensus 180 ~~~~~~~~g~~I~~~G-~~~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~f 233 (299)
T 3shr_A 180 LEETHYENGEYIIRQG-ARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWF 233 (299)
T ss_dssp CEEEEECTTCEEECTT-CEECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEE
T ss_pred ccEEEECCCCEEEeCC-CCCCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEe
Confidence 3456677777543322 23478999999999998876 3453 456789999976
No 238
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=50.91 E-value=6.2 Score=30.77 Aligned_cols=52 Identities=17% Similarity=0.165 Sum_probs=35.2
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCe-EEEEEecCCcEEE
Q 027585 100 NRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNV-FYSKVLSAGEMFV 152 (221)
Q Consensus 100 ~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~L~~GDv~~ 152 (221)
....+++|...-..-.+ ...+.+|++|.+.+...+++|+ .....+.+||.+=
T Consensus 33 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 85 (227)
T 3dkw_A 33 DLVNLDKGAYVFRQGEP-AHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFA 85 (227)
T ss_dssp EEEECCTTEEEECTTSB-CCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEES
T ss_pred EEEEECCCCEEEcCCCc-cceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEee
Confidence 34556666654332223 4789999999999988766654 3356788999774
No 239
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=48.86 E-value=28 Score=27.07 Aligned_cols=49 Identities=12% Similarity=0.119 Sum_probs=33.6
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMF 151 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~ 151 (221)
+....+.+|...-..-- .+..+.+|.+|++++...+. + ....+.+||.+
T Consensus 148 ~~~~~~~~g~~i~~~g~-~~~~~y~I~~G~v~v~~~~~-~--~~~~l~~g~~f 196 (246)
T 3of1_A 148 LDTKIYQPGETIIREGD-QGENFYLIEYGAVDVSKKGQ-G--VINKLKDHDYF 196 (246)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEECEEEEEETTT-E--EEEEEETTCEE
T ss_pred hheEEeCCCCEEEeCCC-cCCEEEEEEecEEEEEEcCC-c--eEEEcCCCCcc
Confidence 34566777775433222 34889999999999876553 1 36788999976
No 240
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=48.35 E-value=24 Score=28.81 Aligned_cols=48 Identities=19% Similarity=0.198 Sum_probs=33.7
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMF 151 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~ 151 (221)
+....+.+|...-..-.+ +..+.+|++|.+++.. +|+ ....+.+||.+
T Consensus 62 ~~~~~~~~g~~i~~~G~~-~~~~yiI~~G~v~v~~---~g~-~~~~~~~G~~f 109 (299)
T 3shr_A 62 MYPVEYGKDSCIIKEGDV-GSLVYVMEDGKVEVTK---EGV-KLCTMGPGKVF 109 (299)
T ss_dssp CEEEEECTTCEEECTTCB-CCCEEEEEESCEEEEE---TTE-EEEEECTTCEE
T ss_pred cCeEEECCCCEEEcCCCc-CceEEEEEEEEEEEEE---CCE-EEEEeCCCCee
Confidence 445677888765433334 3789999999999854 333 36789999976
No 241
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=45.32 E-value=37 Score=25.79 Aligned_cols=53 Identities=11% Similarity=-0.024 Sum_probs=38.5
Q ss_pred CCCCCCCCcEEEEEEeCEEEEEEEecC--------------------C-eEEEEEecCCcEEEECCCCeEEEEe
Q 027585 111 PPHSHPRASESGIVIKGKLLVGFFTTN--------------------N-VFYSKVLSAGEMFVIPRGLIHFQQN 163 (221)
Q Consensus 111 ~~H~Hp~a~Ei~yVl~G~~~v~~~~~~--------------------~-~~~~~~L~~GDv~~~P~g~~H~~~N 163 (221)
.+-.|.+-..+-|+++|+=++++.... + ......|++|+.++|-++.+|....
T Consensus 61 ~~E~Hr~YiDIq~~l~G~E~i~~~~~~~~~~~~~~y~~e~D~~~~~~~~~~~~v~l~~G~FaiFfP~d~H~p~~ 134 (155)
T 1s4c_A 61 KAELHHEYLDVQVLIRGTENIEVGATYPNLSKYEDYNEADDYQLCADIDDKFTVTMKPKMFAVFYPYEPHKPCC 134 (155)
T ss_dssp CEEECSSEEEEEEEEESCEEEEECCSCCCGGGSCCCBTTTTBEEESCCTTCEEEEECTTEEEEECTTCCEEEEE
T ss_pred ccccccceEEEEecceeeEEEEEEecccCcccCCCCCcCCCEEecCCCCccEEEEeCCCEEEEECCCccccccc
Confidence 444587788999999998777766421 0 1124678999999999999998744
No 242
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=42.45 E-value=24 Score=32.59 Aligned_cols=80 Identities=25% Similarity=0.292 Sum_probs=50.4
Q ss_pred ccccCCCcccceEEEEEEEcCCCcCCCCCCC-CCcEEEEEEeCEEEEEEEecC---------------------------
Q 027585 86 VLAFPGVNTLGISMNRVDFAPGGLNPPHSHP-RASESGIVIKGKLLVGFFTTN--------------------------- 137 (221)
Q Consensus 86 ~~~fP~l~~~gis~~~v~l~Pgg~~~~H~Hp-~a~Ei~yVl~G~~~v~~~~~~--------------------------- 137 (221)
...+||.++-.+.+ -.+|...+||.-. .-.-+-|-..|.-.+++.-+.
T Consensus 228 ~~~I~GVNtpqLYi----gm~gS~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~k~e~l~~k~~~d~l~~~~~pspe 303 (510)
T 4ask_A 228 GHTILGMNTVQLYM----KVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRHGVDYLTGSWWPILD 303 (510)
T ss_dssp SSCCTTTTSCEEEE----ECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHTTCCTTTSCBCCCHH
T ss_pred CCcCCCcChhheEE----ccccccccceecCCcceeEEEeecCCceeEEEECHHHHHHHHHHHHHhCcchhhccccCCHH
Confidence 35778888643332 3577788888622 123444555444333333111
Q ss_pred -----C-eEEEEEecCCcEEEECCCCeEEEEecCCccE
Q 027585 138 -----N-VFYSKVLSAGEMFVIPRGLIHFQQNVGEGKA 169 (221)
Q Consensus 138 -----~-~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a 169 (221)
| .++..+=++||.+++++|..|+..|.|-..-
T Consensus 304 ~L~kagIPvyr~iQkPGdfVit~PgtyH~Vqs~Gf~~n 341 (510)
T 4ask_A 304 DLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNN 341 (510)
T ss_dssp HHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEE
T ss_pred HHHhCCCCeEEEEECCCCEEEECCCceEEEEecCeeee
Confidence 2 3446888999999999999999999987443
No 243
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=42.34 E-value=38 Score=31.47 Aligned_cols=33 Identities=24% Similarity=0.503 Sum_probs=27.1
Q ss_pred EEEEEecCCcEEEECCCCeEEEEecCCccEEEE
Q 027585 140 FYSKVLSAGEMFVIPRGLIHFQQNVGEGKALAF 172 (221)
Q Consensus 140 ~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l 172 (221)
++..+=++||.+++++|..|+..|.|-.-.+..
T Consensus 337 vyr~vQkpGd~Vi~~PgayH~v~n~G~~~n~aw 369 (531)
T 3avr_A 337 VYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAW 369 (531)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred eEEEEECCCCEEEECCCceEEEEecceeeeeEE
Confidence 447888999999999999999999997444333
No 244
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=39.85 E-value=51 Score=28.03 Aligned_cols=66 Identities=17% Similarity=0.210 Sum_probs=44.3
Q ss_pred ceEEEEEEEcCCCcCC-CCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEEEECCCCeEE-------EEecCCc
Q 027585 96 GISMNRVDFAPGGLNP-PHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPRGLIHF-------QQNVGEG 167 (221)
Q Consensus 96 gis~~~v~l~Pgg~~~-~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~-------~~N~g~~ 167 (221)
|.....+.+.||.... .-.|+- .|=+|+++|.. ..|+.++-|+|..|- -.- .+.
T Consensus 216 G~~TrLlr~~Pg~dt~~v~iHdy-~EEvY~LeG~~----------------d~G~Y~~RPpg~~HGps~~~~ppf~-Se~ 277 (303)
T 2qdr_A 216 GGGVWLLAILPHFDNKYQMIQPY-NEEGYCLTGYC----------------DVGDYRIVKDHYWYCPSFSTLPRHI-TDD 277 (303)
T ss_dssp SCEEEEEEECSSEECCSEEEECS-CEEEEEEEEEE----------------EETTEEEETTEEEEECTTEEECCEE-ESS
T ss_pred CCeEEEEEECCCCCCCCceeecc-ceeEEEEeeec----------------cCceeeEcCCCCccCccccCCCCcC-cCC
Confidence 4456667777876543 223665 78899999977 338899999999998 332 356
Q ss_pred cEEEEEEEcCCC
Q 027585 168 KALAFTAFNSHL 179 (221)
Q Consensus 168 ~a~~l~~~~s~~ 179 (221)
.+.++.-.+.+-
T Consensus 278 G~l~fvR~DgdL 289 (303)
T 2qdr_A 278 GGLFFVRVDRDL 289 (303)
T ss_dssp CEEEEEEESSCT
T ss_pred ceEEEEEeCccc
Confidence 666666555443
No 245
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=36.85 E-value=8.8 Score=27.28 Aligned_cols=33 Identities=21% Similarity=0.234 Sum_probs=23.0
Q ss_pred CcEEEEEEeCEEEEEEEecCCeEE-EE--EecCCcEE
Q 027585 118 ASESGIVIKGKLLVGFFTTNNVFY-SK--VLSAGEMF 151 (221)
Q Consensus 118 a~Ei~yVl~G~~~v~~~~~~~~~~-~~--~L~~GDv~ 151 (221)
...+.+|++|++++. ...+|+.. .. .+.+||.+
T Consensus 47 ~~~~y~i~~G~v~~~-~~~~g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 47 VNEMLFIIRGRLESV-TTDGGRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp CSEEEEEEECCCEEE-CCSSCSSSSSCEEECCTTCBS
T ss_pred CCeEEEEEeeEEEEE-EcCCCcceeeeeeeecCCCEe
Confidence 478999999999965 44445421 23 78899965
No 246
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=35.22 E-value=56 Score=28.09 Aligned_cols=49 Identities=20% Similarity=0.204 Sum_probs=33.1
Q ss_pred EEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCC--eEEEEEecCCcEE
Q 027585 102 VDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNN--VFYSKVLSAGEMF 151 (221)
Q Consensus 102 v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~--~~~~~~L~~GDv~ 151 (221)
..+.+|..+-.--.+ +..+.+|++|++++.....+| ......+.+||.+
T Consensus 274 ~~~~~ge~I~~eGd~-~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~f 324 (381)
T 4din_B 274 VQFEDGEKIVVQGEP-GDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYF 324 (381)
T ss_dssp CCBCSSCBSSCTTSB-CCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEE
T ss_pred ccCCCCCEEEeCCCc-CCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEe
Confidence 445566554332233 488999999999998765444 2346789999976
No 247
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=32.91 E-value=30 Score=29.85 Aligned_cols=48 Identities=19% Similarity=0.156 Sum_probs=34.8
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMF 151 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~ 151 (221)
+....+.+|..+-..-.+ +..+.+|++|.+.+... |+ ....+.+||++
T Consensus 153 ~~~~~~~~ge~I~~~Gd~-~~~~yiI~~G~v~v~~~---~~-~v~~l~~G~~f 200 (381)
T 4din_B 153 MFPVTHIAGETVIQQGNE-GDNFYVVDQGEVDVYVN---GE-WVTNISEGGSF 200 (381)
T ss_dssp CEEEECCTTCBSSCTTSB-CCEEEECSSSEEEEEET---TE-EEEEEESSCCB
T ss_pred ceEEEECCCCEEEeCCCC-CCeEEEEEeeEEEEEEC---Ce-EeeeCCCCCEE
Confidence 556778888876544444 38899999999999863 33 35678999975
No 248
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=31.16 E-value=89 Score=30.58 Aligned_cols=53 Identities=17% Similarity=0.048 Sum_probs=37.7
Q ss_pred EEEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCC---eEEEEEecCCcEE
Q 027585 98 SMNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNN---VFYSKVLSAGEMF 151 (221)
Q Consensus 98 s~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~---~~~~~~L~~GDv~ 151 (221)
.+....+++|..+-.-=.++ +.+.+|++|++.+.+.++++ ......+.+||.|
T Consensus 64 ~m~ye~~~~Ge~IfrqGd~g-d~fYIIlsGsV~V~i~~~~~~~~~~~v~~l~~G~sF 119 (999)
T 4f7z_A 64 CGYYENLEKGITLFRQGDIG-TNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAF 119 (999)
T ss_dssp HCEEEEECTTCEEECTTSCC-CEEEEEEESEEEEEECSSSCTTSCEEEEEEETTCEE
T ss_pred heEEEEECCCCEEEcCCCcC-CEEEEEEeeEEEEEEecCCCCCCceeEEEecCCcch
Confidence 45556777877653333454 89999999999999875432 3445789999976
No 249
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=30.76 E-value=65 Score=28.17 Aligned_cols=52 Identities=15% Similarity=0.086 Sum_probs=33.2
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecC------Ce-EEEEEecCCcEE
Q 027585 99 MNRVDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTN------NV-FYSKVLSAGEMF 151 (221)
Q Consensus 99 ~~~v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~------~~-~~~~~L~~GDv~ 151 (221)
+....+.+|..+-.--. .+..+.+|++|++.+...+.+ |+ .....+.+||.+
T Consensus 290 l~~~~~~~Ge~I~~eGd-~~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 290 IGTKVYNDGEQIIAQGD-LADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYF 348 (416)
T ss_dssp CEEEEECTTCEEECTTS-CCCEEEEEEEEEEEEECC------------CEEEEECTTCEE
T ss_pred ceEEEECCCCEEEeCCC-cCCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCCCEe
Confidence 34557777775432222 348899999999999876543 32 345789999976
No 250
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.29 E-value=37 Score=23.63 Aligned_cols=30 Identities=13% Similarity=0.381 Sum_probs=25.1
Q ss_pred ccchhhcCCCCCCHHHHHhhcCCCHHHHHHHHh
Q 027585 185 VPTTLFASTPSVPNQVLTKTFQVDDDLISTIKS 217 (221)
Q Consensus 185 ~~~~lf~~~p~~~~~vla~~f~l~~~~v~~l~~ 217 (221)
+...+|-. +++|+|..-|+++.-+++|+++
T Consensus 45 IDG~lL~~---L~ee~L~edf~ls~Lq~kKi~~ 74 (84)
T 2dkz_A 45 IDGNLLVQ---LTEEILSEDFKLSKLQVKKIMQ 74 (84)
T ss_dssp CCHHHHHH---CCHHHHHHTSCCCHHHHHHHHH
T ss_pred cchHHHHh---CCHHHHHhhcCCCHHHHHHHHH
Confidence 44566764 9999999999999999999875
No 251
>1tc3_C Protein (TC3 transposase); DNA binding, helix-turn-helix, TC1/mariner family, complex (transposase/DNA), DNA binding protein/DNA complex; HET: DNA; 2.45A {Caenorhabditis elegans} SCOP: a.4.1.2
Probab=27.71 E-value=63 Score=18.01 Aligned_cols=25 Identities=8% Similarity=0.058 Sum_probs=21.7
Q ss_pred CCCHHHHHhhcCCCHHHHHHHHhhh
Q 027585 195 SVPNQVLTKTFQVDDDLISTIKSKF 219 (221)
Q Consensus 195 ~~~~~vla~~f~l~~~~v~~l~~~~ 219 (221)
+++..-+|+.++++..+|.+..+.+
T Consensus 21 g~s~~~IA~~lgis~~Tv~~~~~~~ 45 (51)
T 1tc3_C 21 NVSLHEMSRKISRSRHCIRVYLKDP 45 (51)
T ss_dssp TCCHHHHHHHHTCCHHHHHHHHHCS
T ss_pred CCCHHHHHHHHCcCHHHHHHHHhhH
Confidence 4888999999999999999887655
No 252
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=26.77 E-value=58 Score=28.36 Aligned_cols=22 Identities=14% Similarity=0.259 Sum_probs=20.2
Q ss_pred EEEEecCCcEEEECCCCeEEEE
Q 027585 141 YSKVLSAGEMFVIPRGLIHFQQ 162 (221)
Q Consensus 141 ~~~~L~~GDv~~~P~g~~H~~~ 162 (221)
....+++||+++|...++|.-.
T Consensus 234 ~ewd~epGDav~F~~~tlHga~ 255 (344)
T 3nnf_A 234 EEDEYNLGDAFFFNKYVLHQSV 255 (344)
T ss_dssp EECCBCTTCEEEEETTCEEEEC
T ss_pred ccccCCCCcEEEEecceeecCC
Confidence 4678999999999999999987
No 253
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=24.83 E-value=1.6e+02 Score=25.49 Aligned_cols=46 Identities=17% Similarity=0.161 Sum_probs=32.3
Q ss_pred EEEcCCCcCCCCCCCCCcEEEEEEeCEEEEEEEecCCeEEEEEecCCcEE
Q 027585 102 VDFAPGGLNPPHSHPRASESGIVIKGKLLVGFFTTNNVFYSKVLSAGEMF 151 (221)
Q Consensus 102 v~l~Pgg~~~~H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~L~~GDv~ 151 (221)
..+++|...-..-.+ +..+.+|++|++.+...+. .....+.+||.+
T Consensus 364 ~~~~~g~~i~~~G~~-~~~~yiI~~G~v~v~~~~~---~~~~~l~~G~~f 409 (469)
T 1o7f_A 364 SHAKGGTVLFNQGEE-GTSWYIILKGSVNVVIYGK---GVVCTLHEGDDF 409 (469)
T ss_dssp EECSTTCEEECTTSC-CCEEEEEEESEEEEEETTT---EEEEEEETTCEE
T ss_pred eEecCCCEEEeCCCc-CCeEEEEEEeEEEEEEcCC---eeEEEecCCCEE
Confidence 467777765333233 4889999999999976432 246789999966
No 254
>1wy3_A Villin; structural protein; HET: NLE; 0.95A {Synthetic} PDB: 1wy4_A 1yri_A* 1yrf_A* 2f4k_A* 1vii_A 3trv_A* 3trw_A 3tjw_B* 3trv_B* 3try_A* 2ppz_A 2jm0_A* 3tjw_A* 3iur_B*
Probab=23.68 E-value=41 Score=19.42 Aligned_cols=21 Identities=5% Similarity=0.260 Sum_probs=17.1
Q ss_pred CCHHHHHhhcCCCHHHHHHHH
Q 027585 196 VPNQVLTKTFQVDDDLISTIK 216 (221)
Q Consensus 196 ~~~~vla~~f~l~~~~v~~l~ 216 (221)
++++--.+.|+++.++..+|+
T Consensus 1 Lsd~dF~~vFgmsr~eF~~LP 21 (35)
T 1wy3_A 1 LSDEDFKAVFGMTRSAFANLP 21 (35)
T ss_dssp CCHHHHHHHHSSCHHHHHHSC
T ss_pred CCHHHHHHHHCCCHHHHHHCc
Confidence 467778889999999998764
No 255
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=21.47 E-value=2.2e+02 Score=20.04 Aligned_cols=30 Identities=10% Similarity=0.195 Sum_probs=21.0
Q ss_pred EEEeCEEEEEEEecCCeEEEEEecCCcEEEECC
Q 027585 123 IVIKGKLLVGFFTTNNVFYSKVLSAGEMFVIPR 155 (221)
Q Consensus 123 yVl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~ 155 (221)
.|-=|..+. +.+|+.....++.||.++|+.
T Consensus 40 VvAVG~G~~---~~~G~~~p~~VkvGD~Vlf~k 69 (97)
T 1pcq_O 40 VLAVGNGRI---LENGEVKPLDVKVGDIVIFND 69 (97)
T ss_dssp EEEECSEEC---TTSSSCEECSCCTTCEEEECC
T ss_pred EEEEcCcee---cCCCCEEecccCCCCEEEECC
Confidence 333466543 345665667899999999999
No 256
>1und_A Advillin, P92; actin binding, F-actin binding, cytoskeleton, headpiece subdomain; NMR {Homo sapiens} SCOP: a.14.1.1
Probab=21.46 E-value=48 Score=19.36 Aligned_cols=21 Identities=10% Similarity=0.275 Sum_probs=18.3
Q ss_pred CCHHHHHhhcCCCHHHHHHHH
Q 027585 196 VPNQVLTKTFQVDDDLISTIK 216 (221)
Q Consensus 196 ~~~~vla~~f~l~~~~v~~l~ 216 (221)
++++--.+.|+++.++..+|+
T Consensus 3 Lsd~dF~~vFgmsr~eF~~LP 23 (37)
T 1und_A 3 LSEQDFVSVFGITRGQFAALP 23 (37)
T ss_dssp CCHHHHHHHHSSCHHHHHHSC
T ss_pred CCHHHHHHHHCcCHHHHHHCh
Confidence 788888999999999998764
No 257
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=21.45 E-value=1.1e+02 Score=25.23 Aligned_cols=30 Identities=23% Similarity=0.191 Sum_probs=23.4
Q ss_pred eEEEEEecCCcEEEECCCCeEEEE-ecCCcc
Q 027585 139 VFYSKVLSAGEMFVIPRGLIHFQQ-NVGEGK 168 (221)
Q Consensus 139 ~~~~~~L~~GDv~~~P~g~~H~~~-N~g~~~ 168 (221)
......+++||++++...++|.-. |.++.+
T Consensus 214 ~~v~~~~~aGd~vlf~~~~~H~s~~N~s~~~ 244 (308)
T 2a1x_A 214 ARVHLVMEKGDTVFFHPLLIHGSGQNKTQGF 244 (308)
T ss_dssp CCEEECBCTTCEEEECTTCCEEECCBCSSSC
T ss_pred CeEEccCCCccEEEECCCccccCCCCCCCCc
Confidence 345788999999999999999874 555443
No 258
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=20.45 E-value=75 Score=25.96 Aligned_cols=28 Identities=18% Similarity=0.422 Sum_probs=23.0
Q ss_pred EEEEEecCCcEEEECCCCeEEEE-ecCCc
Q 027585 140 FYSKVLSAGEMFVIPRGLIHFQQ-NVGEG 167 (221)
Q Consensus 140 ~~~~~L~~GDv~~~P~g~~H~~~-N~g~~ 167 (221)
.....+++||++++...++|.-. |.++.
T Consensus 227 ~v~~~~~aGd~~~f~~~~~H~s~~N~s~~ 255 (291)
T 2opw_A 227 FVPTPVQRGALVLIHGEVVHKSKQNLSDR 255 (291)
T ss_dssp CEEECBCTTCEEEEETTCEEEECCBCSSS
T ss_pred eeecccCCCcEEEEcCCceecCCCCCCCC
Confidence 45788999999999999999874 65543
Done!