BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027586
(221 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9V3R6|ADAT1_DROME tRNA-specific adenosine deaminase 1 OS=Drosophila melanogaster
GN=adat PE=2 SV=1
Length = 394
Score = 130 bits (327), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 116/213 (54%), Gaps = 24/213 (11%)
Query: 9 EVSKKVLWQYKSLPKKGKPQGREVTVLAAFL-ISSPSKDLEVVALGTGTKCIGRSLLSPH 67
E+++ L +++SLPK GKP + T+LA + + ++ ++V+LG GTKCIG S L P+
Sbjct: 11 EIAELCLKKFESLPKTGKPTANQWTILAGIVEFNRNTEACQLVSLGCGTKCIGESKLCPN 70
Query: 68 GDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVF--NNFLFELGPTGKYRF 125
G I+NDSHAE++ARR LRF Y E+ KQ D +F N+ L Y
Sbjct: 71 GLILNDSHAEVLARRGFLRFLYQEL--KQ----------DRIFHWNSTL------STYDM 112
Query: 126 REGWQLHLYISQLPCGDAS-LSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDS--LQH 182
E + H +Q PCGDA L A R R V + D LQ
Sbjct: 113 DEHVEFHFLSTQTPCGDACILEEEQPAARAKRQRLDEDSEMVYTGAKLISDLSDDPMLQT 172
Query: 183 IGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQG 215
G ++ KPGRG+ TLS+SCSDKIARWN +GVQG
Sbjct: 173 PGALRTKPGRGERTLSMSCSDKIARWNVIGVQG 205
>sp|Q9NS39|RED2_HUMAN Double-stranded RNA-specific editase B2 OS=Homo sapiens GN=ADARB2
PE=1 SV=1
Length = 739
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 110/224 (49%), Gaps = 29/224 (12%)
Query: 6 WGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISS--PSKDLEVVALGTGTKCIGRSL 63
+ D +S+ V +++ + P LA +++ ++ +VVAL +GTKCI
Sbjct: 361 FADSISQLVTQKFREVTTDLTPMHARHKALAGIVMTKGLDARQAQVVALSSGTKCISGEH 420
Query: 64 LSPHGDIVNDSHAEIVARRALLRFFYTEV---LNKQKCSNGIEGLRDDVFNNFLFELGPT 120
LS G +VND HAE+VARRA L F YT++ L+K+ R+D + L
Sbjct: 421 LSDQGLVVNDCHAEVVARRAFLHFLYTQLELHLSKR---------REDSERSIFVRLK-E 470
Query: 121 GKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSL 180
G YR RE HLY+S PCGDA L S + + S S V + G +S
Sbjct: 471 GGYRLRENILFHLYVSTSPCGDARLHSPYEITTDLHS----SKHLVRKFRGHLRTKIESG 526
Query: 181 QHIGRVQRKPGR---------GDTTLSVSCSDKIARWNAVGVQG 215
+ V R P G+ +++SC+DKIARWN +G+QG
Sbjct: 527 EGTVPV-RGPSAVQTWDGVLLGEQLITMSCTDKIARWNVLGLQG 569
>sp|Q91ZS8|RED1_MOUSE Double-stranded RNA-specific editase 1 OS=Mus musculus GN=Adarb1
PE=1 SV=1
Length = 711
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 113/229 (49%), Gaps = 26/229 (11%)
Query: 4 ECWGDEVSKKVLWQYKSLPKK-GKPQGREVTVLAAFLISSPS--KDLEVVALGTGTKCIG 60
+ D VS+ VL ++ L P R VL+ ++++ + KD +V+++ TGTKCI
Sbjct: 321 QVLADAVSRLVLGKFSDLTDNFSSPHARR-KVLSGVVMTTGTDVKDAKVISVSTGTKCIN 379
Query: 61 RSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPT 120
+S G +ND HAEI++RR+LLRF Y ++ + N E + +F
Sbjct: 380 GEYMSDRGLALNDCHAEIISRRSLLRFLYAQL---ELYLNNKEDQKKSIFQK-----SER 431
Query: 121 GKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSL 180
G +R ++ Q HLYIS PCGDA + S H + + + L+ + + +
Sbjct: 432 GGFRLKDTVQFHLYISTSPCGDARIFSPHEPVLEGMTPDSHQLTEPADRHPNRKARGQLR 491
Query: 181 QHI------------GRVQRKPG--RGDTTLSVSCSDKIARWNAVGVQG 215
I +Q G +G+ L++SCSDKIARWN VG+QG
Sbjct: 492 TKIESGEGTIPVRSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQG 540
>sp|P51400|RED1_RAT Double-stranded RNA-specific editase 1 OS=Rattus norvegicus
GN=Adarb1 PE=1 SV=1
Length = 711
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 113/229 (49%), Gaps = 26/229 (11%)
Query: 4 ECWGDEVSKKVLWQYKSLPKK-GKPQGREVTVLAAFLISSPS--KDLEVVALGTGTKCIG 60
+ D VS+ VL ++ L P R VL+ ++++ + KD +V+++ TGTKCI
Sbjct: 321 QVLADAVSRLVLGKFSDLTDNFSSPHARR-KVLSGVVMTTGTDVKDAKVISVSTGTKCIN 379
Query: 61 RSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPT 120
+S G +ND HAEI++RR+LLRF Y ++ + N E + +F
Sbjct: 380 GEYMSDRGLALNDCHAEIISRRSLLRFLYAQL---ELYLNNKEDQKKSIFQK-----SER 431
Query: 121 GKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSL 180
G +R ++ Q HLYIS PCGDA + S H + + + L+ + + +
Sbjct: 432 GGFRLKDTVQFHLYISTSPCGDARIFSPHEPVLEGMAPDSHQLTEPADRHPNRKARGQLR 491
Query: 181 QHI------------GRVQRKPG--RGDTTLSVSCSDKIARWNAVGVQG 215
I +Q G +G+ L++SCSDKIARWN VG+QG
Sbjct: 492 TKIESGEGTIPVRSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQG 540
>sp|P78563|RED1_HUMAN Double-stranded RNA-specific editase 1 OS=Homo sapiens GN=ADARB1
PE=1 SV=1
Length = 741
Score = 97.8 bits (242), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 119/262 (45%), Gaps = 62/262 (23%)
Query: 4 ECWGDEVSKKVLWQYKSLPKK-GKPQGREVTVLAAFLISSPS--KDLEVVALGTGTKCIG 60
+ D VS+ VL ++ L P R VLA ++++ + KD +V+++ TGTKCI
Sbjct: 321 QVLADAVSRLVLGKFGDLTDNFSSPHARR-KVLAGVVMTTGTDVKDAKVISVSTGTKCIN 379
Query: 61 RSLLSPHGDIVNDSHAEIVARRALLRFFYTEV---LNKQKCSNGIEGLRDDVFNNFLFEL 117
+S G +ND HAEI++RR+LLRF YT++ LN +DD + +F+
Sbjct: 380 GEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNN----------KDDQKRS-IFQK 428
Query: 118 GPTGKYRFREGWQLHLYISQLPCGDASLSSCHSA---PRNFFSREGNSLSSVDELNGFKD 174
G +R +E Q HLYIS PCGDA + S H +++ G + L
Sbjct: 429 SERGGFRLKENVQFHLYISTSPCGDARIFSPHEPILEGSRSYTQAGVQWCNHGSLQPRPP 488
Query: 175 GIY-----DSLQHIGRVQ---RKPGR------------GDTTLSV--------------- 199
G+ + Q G + R P R G+ T+ V
Sbjct: 489 GLLSDPSTSTFQGAGTTEPADRHPNRKARGQLRTKIESGEGTIPVRSNASIQTWDGVLQG 548
Query: 200 ------SCSDKIARWNAVGVQG 215
SCSDKIARWN VG+QG
Sbjct: 549 ERLLTMSCSDKIARWNVVGIQG 570
>sp|Q54XP3|ADAT1_DICDI tRNA-specific adenosine deaminase 1 OS=Dictyostelium discoideum
GN=adat1 PE=3 SV=1
Length = 545
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 30/162 (18%)
Query: 19 KSLPKKGKPQGREVTVLAAFLI----SSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDS 74
K L KKGKP E TVLA ++ +S + +V++LGTG +C+G+S LS GD++NDS
Sbjct: 23 KKLIKKGKPISGEWTVLATLVLVVENTSSYEIKQVLSLGTGNRCLGKSSLSNQGDVLNDS 82
Query: 75 HAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFEL---------------GP 119
HAEI+ +R+ +F Y E+LN L+ +N+ LF + G
Sbjct: 83 HAEIICKRSFQKFCYNEILN---------LLQSKYYNSILFNIEYHDSNNNNKDNDNNGS 133
Query: 120 TGKYRFREGWQLHLYISQLPCGDASLSSC--HSAPRNFFSRE 159
++G LH Y++Q PCGD S+ + P NF +E
Sbjct: 134 LPTISIKKGHSLHFYVNQTPCGDCSIFPFKKETQPENFIEKE 175
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 29/35 (82%)
Query: 181 QHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQG 215
IG ++ KPGRGD T+S+SCSDKIARWN +G+QG
Sbjct: 295 HQIGVLRVKPGRGDPTVSMSCSDKIARWNVLGIQG 329
>sp|P97616|RED2_RAT Double-stranded RNA-specific editase B2 OS=Rattus norvegicus
GN=Adarb2 PE=2 SV=1
Length = 746
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 6 WGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISS--PSKDLEVVALGTGTKCIGRSL 63
+ D VS+ V +++ L LA +++ +K +V+ L +GTKCI
Sbjct: 368 FADSVSQLVTQKFRELTVGLTSVYARHKTLAGIVMTKGLDTKQAQVIVLSSGTKCISGEH 427
Query: 64 LSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKY 123
+S G +VND HAEIVARRA L F YT++ + S E +F G Y
Sbjct: 428 ISDQGLVVNDCHAEIVARRAFLHFLYTQL--ELHLSKHQEDPERSIFIRV-----KEGGY 480
Query: 124 RFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHI 183
R RE HLY+S PCGDA L+S P +S V + G +S +
Sbjct: 481 RLRENILFHLYVSTSPCGDARLNS----PYEITIDLNSSKHIVRKFRGHLRTKIESGEGT 536
Query: 184 GRVQRKPGR---------GDTTLSVSCSDKIARWNAVGVQG 215
V R P G+ +++SC+DKIA WN +G+QG
Sbjct: 537 VPV-RGPSAVQTWDGILLGEQLVTMSCTDKIASWNVLGLQG 576
>sp|Q9JI20|RED2_MOUSE Double-stranded RNA-specific editase B2 OS=Mus musculus GN=Adarb2
PE=2 SV=2
Length = 745
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 6 WGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISS--PSKDLEVVALGTGTKCIGRSL 63
+ D VS+ V +++ L LA +++ +K +V+ L +GTKCI
Sbjct: 367 FADSVSQLVTQKFRELTVGLTSVYARHKTLAGIVMTKGLDTKQAQVIVLSSGTKCISGEH 426
Query: 64 LSPHGDIVNDSHAEIVARRALLRFFYTEV---LNKQKCSNGIEGLRDDVFNNFLFELGPT 120
+S G +VND HAEIVARRA L F Y+++ L+K + +D + L
Sbjct: 427 ISDQGLVVNDCHAEIVARRAFLHFLYSQLELHLSKHQ---------EDPERSIFIRLK-E 476
Query: 121 GKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSL 180
G YR RE HLY+S PCGDA ++S P + +S V + G +S
Sbjct: 477 GGYRLRENILFHLYVSTSPCGDARVNS----PYEITTDLNSSKHIVRKFRGHLRTKIESG 532
Query: 181 QHIGRVQRKPGR---------GDTTLSVSCSDKIARWNAVGVQG 215
+ V R P G+ +++SC+DKIA WN +G+QG
Sbjct: 533 EGTVPV-RGPSAVQTWDGILLGEQLITMSCTDKIASWNVLGLQG 575
>sp|Q9NII1|ADAR_DROME Double-stranded RNA-specific editase Adar OS=Drosophila
melanogaster GN=Adar PE=1 SV=2
Length = 676
Score = 90.9 bits (224), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 40/230 (17%)
Query: 4 ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSK--DLEVVALGTGTKCIGR 61
+ D + + VL ++ + K + R VLA +++ + +V+++ TGTKC+
Sbjct: 300 QIHADTIGRLVLEKFMEVIKGQEAYSRR-KVLAGIVMTENMNFCEAKVISVSTGTKCVSG 358
Query: 62 SLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTG 121
+S +G ++NDSHAEIV+RR LL++ Y ++ + + + + F+
Sbjct: 359 EHMSVNGAVLNDSHAEIVSRRCLLKYLYAQLDLQCNQATAYQSI-------FVRNTDGQY 411
Query: 122 KYRFREGWQLHLYISQLPCGDASLSSCHSAPR------NFFSR--------EGNSLSSVD 167
Y+ + G HLYI+ PCGDA + S H N +R G V
Sbjct: 412 PYKLKSGVHFHLYINTAPCGDARIFSPHENDTGVDKHPNRKARGQLRTKIESGEGTIPVK 471
Query: 168 ELNGFK--DGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQG 215
+G + DG+ +G L++SCSDKIARWN VG+QG
Sbjct: 472 SSDGIQTWDGVL--------------QGQRLLTMSCSDKIARWNIVGIQG 507
>sp|P55265|DSRAD_HUMAN Double-stranded RNA-specific adenosine deaminase OS=Homo sapiens
GN=ADAR PE=1 SV=4
Length = 1226
Score = 90.5 bits (223), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 98/207 (47%), Gaps = 49/207 (23%)
Query: 34 VLAAFLISSPSKDL-EVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEV 92
+LAA ++ S+D+ VV+LGTG +C+ LS G+ VND HAEI++RR +RF Y+E+
Sbjct: 868 ILAAIIMKKDSEDMGVVVSLGTGNRCVKGDSLSLKGETVNDCHAEIISRRGFIRFLYSEL 927
Query: 93 L--NKQKCSNGIEGLRDDVFNNFLFELGPTG-KYRFREGWQLHLYISQLPCGDASLSSCH 149
+ N Q + I FE G K + ++ HLYIS PCGD +L
Sbjct: 928 MKYNSQTAKDSI------------FEPAKGGEKLQIKKTVSFHLYISTAPCGDGALFDKS 975
Query: 150 SAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSV---------- 199
+ R S E ++++ + G+++ K G+ T+ V
Sbjct: 976 CSDRAMESTESRHYP-----------VFENPKQ-GKLRTKVENGEGTIPVESSDIVPTWD 1023
Query: 200 -----------SCSDKIARWNAVGVQG 215
SCSDKI RWN +G+QG
Sbjct: 1024 GIRLGERLRTMSCSDKILRWNVLGLQG 1050
>sp|Q99MU3|DSRAD_MOUSE Double-stranded RNA-specific adenosine deaminase OS=Mus musculus
GN=Adar PE=1 SV=2
Length = 1178
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 49/207 (23%)
Query: 34 VLAAFLISSPSKDL-EVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEV 92
+LAA ++ +D+ VV+LGTG +C+ LS G+ VND HAEI++RR +RF Y+E+
Sbjct: 817 ILAAIIMKRDPEDMGVVVSLGTGNRCVKGDSLSLKGETVNDCHAEIISRRGFIRFLYSEL 876
Query: 93 LNKQKCSNGIEGLRDDVFNNFLFELGPTG-KYRFREGWQLHLYISQLPCGDASL--SSCH 149
+ N +FEL G K + ++ HLYIS PCGD +L SC
Sbjct: 877 MK----------YNHHTAKNSIFELARGGEKLQIKKTVSFHLYISTAPCGDGALFDKSC- 925
Query: 150 SAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSV---------- 199
S +V+ ++++ + G+++ K G+ T+ V
Sbjct: 926 ------------SDRAVESTESRHYPVFENPKQ-GKLRTKVENGEGTIPVESSDIVPTWD 972
Query: 200 -----------SCSDKIARWNAVGVQG 215
SCSDKI RWN +G+QG
Sbjct: 973 GIRLGERLRTMSCSDKILRWNVLGLQG 999
>sp|P55266|DSRAD_RAT Double-stranded RNA-specific adenosine deaminase OS=Rattus
norvegicus GN=Adar PE=2 SV=1
Length = 1175
Score = 87.0 bits (214), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 97/207 (46%), Gaps = 49/207 (23%)
Query: 34 VLAAFLISSPSKDL-EVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEV 92
+LAA ++ +D+ VV+LGTG +C+ LS G+ VND HAEI++RR +RF Y+E+
Sbjct: 814 ILAAIIMKRDPEDMGVVVSLGTGNRCVKGDSLSLKGETVNDCHAEIISRRGFIRFLYSEL 873
Query: 93 LNKQKCSNGIEGLRDDVFNNFLFELGPTG-KYRFREGWQLHLYISQLPCGDASL--SSCH 149
+ N +FEL G K + ++ HLYIS PCGD + SC
Sbjct: 874 MK----------YNHHTAKNSIFELARGGEKLQIKKTVSFHLYISTAPCGDGAHFDKSC- 922
Query: 150 SAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSV---------- 199
S +V+ ++++ + G+++ K G+ T+ V
Sbjct: 923 ------------SDRAVESTESRHYPVFENPKQ-GKLRTKVENGEGTIPVESSDIVPTWD 969
Query: 200 -----------SCSDKIARWNAVGVQG 215
SCSDKI RWN +G+QG
Sbjct: 970 GIRLGERLRTMSCSDKILRWNVLGLQG 996
>sp|Q5ZI16|ADAT1_CHICK tRNA-specific adenosine deaminase 1 OS=Gallus gallus GN=ADAT1 PE=2
SV=1
Length = 503
Score = 84.3 bits (207), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 83/157 (52%), Gaps = 31/157 (19%)
Query: 7 GDEVSKKVLWQYKS-LPKKGKPQ-GREVTVLAAFL-ISSPSKDL------------EVVA 51
DE+++ Y+S LPK+GKP RE T LAA + + S + + EVVA
Sbjct: 4 ADEIAELCYEHYRSRLPKQGKPDPSREWTSLAAVVKVESAANEAGSAVLGTLQVAKEVVA 63
Query: 52 LGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEV---LNKQKCSNGIEGLRDD 108
LGTGTKCIG + + GD++NDSHAE+VA+R+ R+ ++ + Q+CS I G
Sbjct: 64 LGTGTKCIGLNKMRKTGDVLNDSHAEVVAKRSFQRYLLHQMRLATSYQQCSIFIPGTE-- 121
Query: 109 VFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASL 145
TGK++ + + S PCGDAS+
Sbjct: 122 -----------TGKWKLKPNIIFIFFCSHTPCGDASI 147
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 183 IGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQG 215
+G ++ KPGRGD T S+SCSDK+ARWN +G QG
Sbjct: 282 VGLLRVKPGRGDRTCSMSCSDKLARWNVLGCQG 314
>sp|P53065|TAD1_YEAST tRNA-specific adenosine deaminase 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TAD1 PE=1 SV=1
Length = 400
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 116/245 (47%), Gaps = 55/245 (22%)
Query: 7 GDEVSKKVLWQYKSLPKKGKPQGR-----EVTVLAAFLISSPSKD-----LEVVALGTGT 56
G+E+S +V+ +Y L +P R E T+LA +++ ++D +E++++ TG
Sbjct: 24 GEEISTRVINEYSKLKSACRPIIRPSGIREWTILAG--VAAINRDGGANKIEILSIATGV 81
Query: 57 KCIGRSLLS-PHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLF 115
K + S L G I++D HAEI+A LR T +LN+ + N G D F
Sbjct: 82 KALPDSELQRSEGKILHDCHAEILA----LRGANTVLLNRIQNYNPSSG---DKFIQHND 134
Query: 116 ELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDG 175
E+ ++ +E W+L LYIS+LPCGDAS+S + +N D+ +D
Sbjct: 135 EI--PARFNLKENWELALYISRLPCGDASMSFLNDNCKN------------DDFIKIEDS 180
Query: 176 IYDSLQHIGR-----------------VQRKPGRGDT--TLSVSCSDKIARWNAVGVQGL 216
D Q++ R V+ KPGR D+ TLS SCSDK+ V
Sbjct: 181 --DEFQYVDRSVKTILRGRLNFNRRNVVRTKPGRYDSNITLSKSCSDKLLMKQRSSVLNC 238
Query: 217 FNYNL 221
NY L
Sbjct: 239 LNYEL 243
>sp|Q9JHI2|ADAT1_MOUSE tRNA-specific adenosine deaminase 1 OS=Mus musculus GN=Adat1 PE=2
SV=1
Length = 499
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 27/155 (17%)
Query: 7 GDEVSKKVLWQYK-SLPKKGKPQ-GREVTVLAAFL---------ISSPSKDL----EVVA 51
DE+++ Y LPK+GKP+ RE T+LAA + P K++ EVV+
Sbjct: 4 ADEIAQLCYAHYNVRLPKQGKPEPNREWTLLAAVVKIQASANQACDIPEKEVQVTKEVVS 63
Query: 52 LGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFN 111
+GTGTKCIG+S + GDI+NDSHAEI+ARR+ R+ ++ L +
Sbjct: 64 MGTGTKCIGQSKMRESGDILNDSHAEIIARRSFQRYLLHQL-----------HLAAVLKE 112
Query: 112 NFLFELGPT-GKYRFREGWQLHLYISQLPCGDASL 145
+ +F G G +R R + S PCGDAS+
Sbjct: 113 DSIFVPGTQRGLWRLRPDLSFVFFSSHTPCGDASI 147
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 179 SLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGLF 217
+ +G ++ KPGRGD T S+SCSDK+ARWN +G QG
Sbjct: 272 AYHQVGLLRVKPGRGDRTCSMSCSDKMARWNVLGCQGAL 310
>sp|Q9BUB4|ADAT1_HUMAN tRNA-specific adenosine deaminase 1 OS=Homo sapiens GN=ADAT1 PE=2
SV=1
Length = 502
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 81/155 (52%), Gaps = 27/155 (17%)
Query: 7 GDEVSKKVLWQYK-SLPKKGKPQ-GREVTVLAAFL-ISSPSKDL------------EVVA 51
DE+++ Y LPKKGKP+ E T+LAA + I SP+ EVV+
Sbjct: 4 ADEIAQLCYEHYGIRLPKKGKPEPNHEWTLLAAVVKIQSPADKACDTPDKPVQVTKEVVS 63
Query: 52 LGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFN 111
+GTGTKCIG+S + +GDI+NDSHAE++ARR+ R+ ++ L +
Sbjct: 64 MGTGTKCIGQSKMRKNGDILNDSHAEVIARRSFQRYLLHQL-----------QLAATLKE 112
Query: 112 NFLFELGPT-GKYRFREGWQLHLYISQLPCGDASL 145
+ +F G G ++ R + S PCGDAS+
Sbjct: 113 DSIFVPGTQKGVWKLRRDLIFVFFSSHTPCGDASI 147
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 179 SLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGLFNYNL 221
+ +G ++ KPGRGD T S+SCSDK+ARWN +G QG +L
Sbjct: 277 AFHQVGLLRVKPGRGDRTRSMSCSDKMARWNVLGCQGALLMHL 319
>sp|Q28FE8|ADAT1_XENTR tRNA-specific adenosine deaminase 1 OS=Xenopus tropicalis GN=adat1
PE=2 SV=1
Length = 472
Score = 77.8 bits (190), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 24/197 (12%)
Query: 7 GDEVSKKVLWQYKS-LPKKGKPQ-GREVTVLAAFLISSPSKDLEV----VALGTGTKCIG 60
DE++ Y + LPK+G P RE T++AA + +D +V VA+GTGTKCIG
Sbjct: 9 ADEIAALSYGHYTTQLPKQGLPDPSREWTLMAAVIQIESVEDTKVIKKVVAMGTGTKCIG 68
Query: 61 RSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPT 120
++ L GD++ DSHAEI+A+R+ R+ ++ S + +D +F
Sbjct: 69 QAKLRKTGDVLQDSHAEIIAKRSFQRYLLHQL------SLAVSDTKDCLF----IPGTEK 118
Query: 121 GKYRFREGWQLHLYISQLPCGDASLSSC--------HSAPRNFFSREGNSLSSVDELNGF 172
GK+ R + S PCGDAS+ H P ++ +S + + +N
Sbjct: 119 GKWMLRPEISFVFFTSHTPCGDASIIPVISHEDELGHPLPSEVTEKDHSSNNVCESVNTT 178
Query: 173 KDGIYDSLQHIGRVQRK 189
S + IG + +K
Sbjct: 179 YKRKVRSEEDIGFISKK 195
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 28/33 (84%)
Query: 183 IGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQG 215
+G ++ KPGRGD T+S+SCSDK+ARWN +G QG
Sbjct: 253 VGVLRIKPGRGDRTMSMSCSDKMARWNVLGCQG 285
>sp|Q4R7N3|ADAT1_MACFA tRNA-specific adenosine deaminase 1 OS=Macaca fascicularis GN=ADAT1
PE=2 SV=1
Length = 502
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 73/140 (52%), Gaps = 26/140 (18%)
Query: 21 LPKKGKPQ-GREVTVLAAFL-ISSPSKD------------LEVVALGTGTKCIGRSLLSP 66
LPKKGKP+ E T+LAA + I SP+ EVV++GTGTKCIG+S +
Sbjct: 19 LPKKGKPEPNHEWTLLAAVVKIQSPADQDCDTPDKPAQVTKEVVSMGTGTKCIGQSKMRK 78
Query: 67 HGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPT-GKYRF 125
GDI+NDSHAE++ARR R+ ++ L + + +F G G ++
Sbjct: 79 SGDILNDSHAEVIARRNFQRYLLHQL-----------QLAATLKEDSIFVPGTQKGLWKL 127
Query: 126 REGWQLHLYISQLPCGDASL 145
R + S PCGDAS+
Sbjct: 128 RRDLFFVFFSSHTPCGDASI 147
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 179 SLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGLF 217
+ +G ++ KPGRGD T S+SCSDK+ARWN +G QG
Sbjct: 277 AFHQVGLLRVKPGRGDRTRSMSCSDKMARWNVLGCQGAL 315
>sp|O42912|TAD1_SCHPO tRNA-specific adenosine deaminase 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC16A3.06 PE=3 SV=1
Length = 388
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 28/211 (13%)
Query: 7 GDEVSKKVLWQYKSLPKKGKPQ-----GREVTVLAAFLISSPSK-DLEVVALGTGTKCIG 60
G+ ++ VL ++ L + GKP RE T LA +I + + V L TG KC
Sbjct: 13 GNLIALAVLNKFDELARHGKPIIRANGVREWTTLAGVVIQKKMENEFICVCLATGVKCTP 72
Query: 61 RSLLSPH--GDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELG 118
++ G +++D HAEI+A R R + +++ + +L E+
Sbjct: 73 AGIIKNEQLGSVLHDCHAEILALRCFNRLLLEHCI----------LIKESKKDTWLLEVA 122
Query: 119 PTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGN-SLSSVDELNGFKDGIY 177
GK+ +HLY+S+ PCGDAS+ S N ++ N ++ S + G D
Sbjct: 123 DNGKFTLNSNLLIHLYVSECPCGDASMELLASRLEN--NKPWNLTVDSEKLMRGRAD--- 177
Query: 178 DSLQHIGRVQRKPGRGDTTL--SVSCSDKIA 206
+G V+ KPGR D + S SC+DK+A
Sbjct: 178 --FGLLGIVRTKPGRPDAPVSWSKSCTDKLA 206
>sp|Q32NG0|ADAD1_XENLA Adenosine deaminase domain-containing protein 1 OS=Xenopus laevis
GN=adad1 PE=2 SV=1
Length = 586
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 91/187 (48%), Gaps = 26/187 (13%)
Query: 35 LAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLN 94
LAAF+I + EVVA+GTG G+SL S G +++DSHA +VARR+LLR+FY ++L
Sbjct: 242 LAAFVIEKGGQHWEVVAIGTGEFNYGQSLQS-DGRVLHDSHAMVVARRSLLRYFYRQLLL 300
Query: 95 KQKCSNGIEGLRDDVFNNFLFELGP-TGKYRFREGWQLHLYISQLPCGDASLSS--CHSA 151
+NG+ + +F P T + + LY++QLP G A + C S
Sbjct: 301 LYSGNNGM-------MDKSIFCTEPATNLLALKPNLNIFLYMNQLPKGAAQTNPQLCLS- 352
Query: 152 PRNFFSREGN---SLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARW 208
P + + E N SL E Y G + S+S +DK+ RW
Sbjct: 353 PHSLSAHEANDKLSLHVSVEGKNIPASYYS-----GEIVHN------LYSMSSTDKLTRW 401
Query: 209 NAVGVQG 215
+GVQG
Sbjct: 402 EVLGVQG 408
>sp|Q5SUE7|ADAD1_MOUSE Adenosine deaminase domain-containing protein 1 OS=Mus musculus
GN=Adad1 PE=1 SV=1
Length = 619
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 90/189 (47%), Gaps = 31/189 (16%)
Query: 35 LAAFLISSPSKDLEVVALGTG----TKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYT 90
LAAF+I EVVA+GTG ++CI P+G +++D+HA + ARR+LLR+FY
Sbjct: 276 LAAFIIERAGHH-EVVAIGTGEYNYSQCI-----KPNGRVLHDTHAVVTARRSLLRYFYR 329
Query: 91 EVLNKQKCSNGIEGLRDDVFNNFLFELGPTGK-YRFREGWQLHLYISQLPCGDASL-SSC 148
++L + +F P ++ L+LY++QLP G A + S
Sbjct: 330 QLL-------LFYSKNPAMMEKSIFCTEPASNLLTLKQNINLYLYMNQLPKGSAQIKSQL 382
Query: 149 HSAPRNFFSREGN-SLSSVDELNG-FKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIA 206
P + + E N LS + G +Y S + RV S+S SDK+
Sbjct: 383 RLNPHSISAFEANEELSLHVAVEGKIYLTVYCSADGVNRVN----------SMSSSDKLT 432
Query: 207 RWNAVGVQG 215
RW +GVQG
Sbjct: 433 RWEVLGVQG 441
>sp|Q3KR54|ADAD1_RAT Adenosine deaminase domain-containing protein 1 OS=Rattus
norvegicus GN=Adad1 PE=2 SV=1
Length = 619
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 90/189 (47%), Gaps = 31/189 (16%)
Query: 35 LAAFLISSPSKDLEVVALGTG----TKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYT 90
LAAF+I EVVA+GTG ++CI P+G +++D+HA + ARR+LLR+FY
Sbjct: 276 LAAFIIERGGHH-EVVAIGTGEYNYSQCI-----KPNGRVLHDTHAVVTARRSLLRYFYR 329
Query: 91 EVLNKQKCSNGIEGLRDDVFNNFLFELGPTGK-YRFREGWQLHLYISQLPCGDASL-SSC 148
++L + +F P ++ L+LY++QLP G A + S
Sbjct: 330 QLL-------LFYSKNPAMMEKSIFCTEPASNLLTLKQNINLYLYMNQLPKGSAQIKSQL 382
Query: 149 HSAPRNFFSREGN-SLSSVDELNG-FKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIA 206
P + + E N LS + G +Y S + RV S+S SDK+
Sbjct: 383 RLNPHSISAFEANEELSLHVAVEGKIYLTVYCSADGVNRVN----------SMSSSDKLT 432
Query: 207 RWNAVGVQG 215
RW +GVQG
Sbjct: 433 RWEVLGVQG 441
>sp|Q96M93|ADAD1_HUMAN Adenosine deaminase domain-containing protein 1 OS=Homo sapiens
GN=ADAD1 PE=2 SV=1
Length = 576
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 27/187 (14%)
Query: 35 LAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLN 94
LAAF+I + EVVA+GTG + + P G +++D+HA + ARR+LLR+FY ++L
Sbjct: 234 LAAFIIERAGQH-EVVAIGTGEYNYSQDI-KPDGRVLHDTHAVVTARRSLLRYFYRQLL- 290
Query: 95 KQKCSNGIEGLRDDVFNNFLFELGPTGKY-RFREGWQLHLYISQLPCGDASL-SSCHSAP 152
+ +F PT ++ + LY++QLP G A + S P
Sbjct: 291 ------LFYSKNPAMMEKSIFCTEPTSNLLTLKQNINICLYMNQLPKGSAQIKSQLRLNP 344
Query: 153 RNFFSREGNSLSSVDEL---NGFKDGIYDSLQHIGRVQRKPGRGDTTLS-VSCSDKIARW 208
+ + E N +EL + IY ++ P G +S +S SDK+ RW
Sbjct: 345 HSISAFEAN-----EELCLHVAVEGKIYLTVYC-------PKDGVNRISSMSSSDKLTRW 392
Query: 209 NAVGVQG 215
+GVQG
Sbjct: 393 EVLGVQG 399
>sp|Q22618|ADR2_CAEEL Probable double-stranded RNA-specific adenosine deaminase
OS=Caenorhabditis elegans GN=adr-2 PE=2 SV=2
Length = 495
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 86/210 (40%), Gaps = 60/210 (28%)
Query: 29 GREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFF 88
G E + + FL + +L+++AL TG K + + G + D HAEI+ARR LLRF
Sbjct: 147 GFEKVIASVFL--KINGNLQIIALSTGNKGLRGDKIVNDGTALIDCHAEILARRGLLRFL 204
Query: 89 YTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSC 148
Y+EVL K S N +F G + G HL+I+ PCG A +
Sbjct: 205 YSEVL---KFSTEPP--------NSIFTKGKNA-LVLKPGISFHLFINTAPCGVARID-- 250
Query: 149 HSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTL----------- 197
K G D LQ+ R++ K +G T+
Sbjct: 251 ---------------------KKLKPGTSDDLQNSSRLRFKIDKGMGTVLGGASEFEAPQ 289
Query: 198 ------------SVSCSDKIARWNAVGVQG 215
++SCSDK+ R N +GVQG
Sbjct: 290 TFDGIMMGERMRTMSCSDKLLRANVLGVQG 319
>sp|Q9D5P4|ADAD2_MOUSE Adenosine deaminase domain-containing protein 2 OS=Mus musculus
GN=Adad2 PE=2 SV=1
Length = 478
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 19/163 (11%)
Query: 48 EVVALGTGTK-CIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLR 106
E+VALGTG+ C G S G ++D H ++ARRALLRFF+ ++L + G +G
Sbjct: 153 ELVALGTGSSSCAGWLEFS--GRRLHDCHGLVIARRALLRFFFRQLLLVTQ--GGPKGQE 208
Query: 107 DDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSV 166
V + GP + + G LHLY+S P G A H S + S
Sbjct: 209 RSVLTP---QPGPGPPFALKPGVFLHLYVSNTPKGAA-----HDIYLLLASEDSVLHSPA 260
Query: 167 DELNGFKDGIYDSLQHIGRVQRKPGRGDTTL-SVSCSDKIARW 208
L G + ++ P DT + +S SDK+ARW
Sbjct: 261 FRLQAHVCGQLKPVSYVA-----PALRDTHVGCLSASDKLARW 298
>sp|Q95JV3|ADAD2_MACFA Adenosine deaminase domain-containing protein 2 OS=Macaca
fascicularis GN=ADAD2 PE=2 SV=2
Length = 580
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 48 EVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRD 107
++VALGTG+ C L G ++D H ++ARRALLRF + ++L + G +G
Sbjct: 255 KLVALGTGSSCCA-GWLEFSGQQLHDCHGLVIARRALLRFLFRQLLLATQ--GGAKGKEQ 311
Query: 108 DVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFF----SREGNSL 163
V + GP + + LHLYIS P G A R+ + S G
Sbjct: 312 SVLAP---QPGPGPPFTLKPRVFLHLYISNTPKGAA---------RDIYLPPTSEGGLPH 359
Query: 164 SSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLS-VSCSDKIARWNAVGVQGLFNYNL 221
S L G + ++ P DT + +S SDK+ARW +G+ G +L
Sbjct: 360 SPPMRLQAHVLGQLKPVCYVA-----PSLCDTHVGCLSASDKLARWAVLGLGGALLAHL 413
>sp|Q8NCV1|ADAD2_HUMAN Adenosine deaminase domain-containing protein 2 OS=Homo sapiens
GN=ADAD2 PE=2 SV=1
Length = 583
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 48 EVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRD 107
++VALGTG+ C L G ++D H ++ARRALLRF + ++L + G +G
Sbjct: 258 KLVALGTGSSCCA-GWLEFSGQQLHDCHGLVIARRALLRFLFRQLLLATQ--GGPKGKEQ 314
Query: 108 DVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFF----SREGNSL 163
V + GP + + LHLYIS P G A R+ + S G
Sbjct: 315 SVLAP---QPGPGPPFTLKPRVFLHLYISNTPKGAA---------RDIYLPPTSEGGLPH 362
Query: 164 SSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLS-VSCSDKIARWNAVGVQGLFNYNL 221
S L G + ++ P DT + +S SDK+ARW +G+ G +L
Sbjct: 363 SPPMRLQAHVLGQLKPVCYVA-----PSLCDTHVGCLSASDKLARWAVLGLGGALLAHL 416
>sp|A6VQX0|SECA_ACTSZ Protein translocase subunit SecA OS=Actinobacillus succinogenes
(strain ATCC 55618 / 130Z) GN=secA PE=3 SV=1
Length = 915
Score = 32.7 bits (73), Expect = 2.2, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 60 GRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGP 119
GR L + D+ ND I +R +L L+ S I+ +R+DVFN+ + E P
Sbjct: 641 GRKNLLQYDDVANDQRHAIYEQRNVL-------LDNDDISETIDAIREDVFNSVIDEYIP 693
Query: 120 TGKYRFREGWQL 131
E W++
Sbjct: 694 PQS--LEEQWKI 703
>sp|Q6B0Y1|YM009_YEAST Putative uncharacterized protein YML009W-B OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YML009W-B
PE=5 SV=1
Length = 158
Score = 30.8 bits (68), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 22 PKKGKPQGREVTVL----AAFLISSPSKDLEVVALGTGTKCIGRSLL-SPHGDIVNDS 74
P G P G E+T++ A L+ +K +E+ LGT TK I ++++ + HG+++N
Sbjct: 91 PTAGLPPGEEITIIKVQEMAELLHGVTKTMEIGLLGT-TKEISQTMVVTVHGEVINHQ 147
>sp|A8AJJ1|CITX_CITK8 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83
/ SGSC4696) GN=citX PE=3 SV=1
Length = 183
Score = 30.8 bits (68), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 17/85 (20%)
Query: 10 VSKKVLWQYK---SLPKKGKPQGREVTVLAAFL-ISSPSKDLEVVALGTGTK-CIGR--- 61
V+KK W + +L P+G FL I +P++DL++ + + +GR
Sbjct: 71 VAKKAGWSVREQAALASASGPEG--------FLAIEAPARDLKLATIELEHQHPLGRLWD 122
Query: 62 -SLLSPHGDIVNDSHAEIVARRALL 85
+L+P GDI++ H + ARR LL
Sbjct: 123 IDVLTPEGDILSRRHFSLPARRCLL 147
>sp|E1C656|HACE1_CHICK E3 ubiquitin-protein ligase HACE1 OS=Gallus gallus GN=HACE1 PE=2
SV=1
Length = 942
Score = 30.4 bits (67), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 149 HSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSD 203
+SA N + EG + +NG + ++D +QH+ V + G T L V+C +
Sbjct: 120 YSADVNICNNEGLTAIHWLAVNGRTELLHDLVQHVSNVDVEDAMGQTALHVACQN 174
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,046,555
Number of Sequences: 539616
Number of extensions: 3582664
Number of successful extensions: 6866
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 6773
Number of HSP's gapped (non-prelim): 50
length of query: 221
length of database: 191,569,459
effective HSP length: 113
effective length of query: 108
effective length of database: 130,592,851
effective search space: 14104027908
effective search space used: 14104027908
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)