Query 027589
Match_columns 221
No_of_seqs 234 out of 778
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 20:44:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027589.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027589hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dkt_A Ring finger and CHY zin 100.0 3.7E-57 1.3E-61 367.9 11.5 139 3-151 4-142 (143)
2 2ecm_A Ring finger and CHY zin 99.5 1.7E-14 5.9E-19 96.4 3.5 52 148-200 3-54 (55)
3 2ep4_A Ring finger protein 24; 99.4 1.4E-13 4.6E-18 97.6 4.6 56 146-203 11-66 (74)
4 1iym_A EL5; ring-H2 finger, ub 99.4 1.1E-13 3.7E-18 92.6 3.4 49 150-200 5-54 (55)
5 2kiz_A E3 ubiquitin-protein li 99.4 2.1E-13 7.1E-18 95.4 4.4 53 147-201 11-63 (69)
6 1x4j_A Ring finger protein 38; 99.4 9.4E-14 3.2E-18 99.0 2.5 53 148-202 21-73 (75)
7 2ecl_A Ring-box protein 2; RNF 99.4 3.4E-13 1.2E-17 98.3 4.8 49 150-200 26-75 (81)
8 1v87_A Deltex protein 2; ring- 99.3 5.8E-13 2E-17 101.6 4.7 56 147-202 22-95 (114)
9 2l0b_A E3 ubiquitin-protein li 99.3 4.4E-13 1.5E-17 99.5 3.6 51 148-200 38-88 (91)
10 2ect_A Ring finger protein 126 99.3 6.5E-13 2.2E-17 94.9 3.4 52 148-201 13-64 (78)
11 3ng2_A RNF4, snurf, ring finge 99.3 1E-12 3.5E-17 91.9 3.1 53 148-201 8-63 (71)
12 2ea6_A Ring finger protein 4; 99.3 1.2E-12 4.1E-17 90.7 3.2 52 148-200 13-67 (69)
13 2xeu_A Ring finger protein 4; 99.3 1.6E-12 5.6E-17 88.8 3.6 51 150-201 3-56 (64)
14 1g25_A CDK-activating kinase a 99.3 4.3E-12 1.5E-16 88.0 4.5 51 150-200 3-54 (65)
15 1chc_A Equine herpes virus-1 r 99.2 3.8E-12 1.3E-16 88.5 3.3 50 149-202 4-53 (68)
16 3dpl_R Ring-box protein 1; ubi 99.2 1.1E-11 3.8E-16 95.5 4.7 48 151-199 49-99 (106)
17 2ct2_A Tripartite motif protei 99.2 1.2E-11 4.1E-16 89.6 4.4 52 149-200 14-67 (88)
18 1e4u_A Transcriptional repress 99.2 1.5E-12 5.1E-17 95.2 -0.9 61 149-211 10-72 (78)
19 2ecn_A Ring finger protein 141 99.2 1.8E-12 6E-17 90.9 -1.0 51 148-204 13-63 (70)
20 2d8t_A Dactylidin, ring finger 99.1 1.9E-11 6.4E-16 86.2 3.0 49 148-201 13-61 (71)
21 2djb_A Polycomb group ring fin 99.1 3.2E-11 1.1E-15 85.2 3.7 49 149-201 14-62 (72)
22 2csy_A Zinc finger protein 183 99.1 2.6E-11 9.1E-16 87.3 3.2 48 149-201 14-61 (81)
23 4ap4_A E3 ubiquitin ligase RNF 99.1 3.3E-11 1.1E-15 92.7 3.4 52 148-200 5-59 (133)
24 4ayc_A E3 ubiquitin-protein li 99.1 1E-10 3.5E-15 92.7 5.5 46 151-201 54-99 (138)
25 2ecy_A TNF receptor-associated 99.1 8.2E-11 2.8E-15 81.6 3.6 48 150-201 15-62 (66)
26 2d8s_A Cellular modulator of i 99.1 7E-11 2.4E-15 86.7 3.4 52 147-200 12-69 (80)
27 2ysl_A Tripartite motif-contai 99.0 1.2E-10 4.1E-15 81.8 4.3 49 148-200 18-68 (73)
28 1t1h_A Gspef-atpub14, armadill 99.0 2.7E-10 9.3E-15 81.1 6.0 49 148-200 6-54 (78)
29 3lrq_A E3 ubiquitin-protein li 99.0 9.9E-11 3.4E-15 88.1 3.1 48 150-200 22-69 (100)
30 2yur_A Retinoblastoma-binding 99.0 6.6E-11 2.2E-15 84.2 1.5 51 149-203 14-66 (74)
31 4a0k_B E3 ubiquitin-protein li 99.0 4.4E-11 1.5E-15 94.0 0.5 50 149-199 47-110 (117)
32 3fl2_A E3 ubiquitin-protein li 99.0 2E-10 6.8E-15 89.1 3.5 48 150-201 52-99 (124)
33 4ap4_A E3 ubiquitin ligase RNF 99.0 2.9E-10 9.8E-15 87.4 4.3 53 148-201 70-125 (133)
34 2ysj_A Tripartite motif-contai 99.0 3.7E-10 1.3E-14 77.4 4.2 43 149-195 19-63 (63)
35 2ckl_B Ubiquitin ligase protei 99.0 3.1E-10 1.1E-14 92.0 4.0 47 151-200 55-101 (165)
36 2ecj_A Tripartite motif-contai 99.0 3.9E-10 1.3E-14 75.6 3.7 43 149-195 14-58 (58)
37 1rmd_A RAG1; V(D)J recombinati 99.0 1.9E-10 6.6E-15 88.0 2.4 65 150-218 23-89 (116)
38 2y43_A E3 ubiquitin-protein li 98.9 3.1E-10 1.1E-14 84.6 3.1 47 150-200 22-68 (99)
39 2ecw_A Tripartite motif-contai 98.9 6.4E-10 2.2E-14 79.4 4.2 48 149-200 18-70 (85)
40 2ckl_A Polycomb group ring fin 98.9 4.4E-10 1.5E-14 85.1 3.5 49 149-201 14-62 (108)
41 3hct_A TNF receptor-associated 98.9 2.8E-10 9.6E-15 87.8 2.2 64 150-217 18-82 (118)
42 3ztg_A E3 ubiquitin-protein li 98.9 4.5E-10 1.5E-14 82.4 3.2 48 149-200 12-61 (92)
43 2egp_A Tripartite motif-contai 98.9 1.6E-10 5.5E-15 82.1 0.3 47 150-200 12-64 (79)
44 2ecv_A Tripartite motif-contai 98.9 7.6E-10 2.6E-14 79.0 3.4 48 149-200 18-70 (85)
45 3l11_A E3 ubiquitin-protein li 98.9 2.4E-10 8.2E-15 87.4 0.5 48 150-201 15-62 (115)
46 2k2d_A Ring finger and CHY zin 98.9 2.7E-10 9.2E-15 83.9 0.0 29 192-220 1-29 (79)
47 1jm7_A BRCA1, breast cancer ty 98.8 6E-09 2E-13 78.5 6.4 47 150-200 21-69 (112)
48 1z6u_A NP95-like ring finger p 98.8 2.7E-09 9.2E-14 86.2 3.6 48 150-201 78-125 (150)
49 2vje_B MDM4 protein; proto-onc 98.7 2.7E-09 9.2E-14 74.3 0.7 51 148-203 5-58 (63)
50 2vje_A E3 ubiquitin-protein li 98.7 4.4E-09 1.5E-13 73.4 1.3 51 147-202 5-58 (64)
51 3knv_A TNF receptor-associated 98.6 4.2E-09 1.4E-13 84.4 -0.2 47 149-199 30-76 (141)
52 3hcs_A TNF receptor-associated 98.6 1.1E-08 3.7E-13 83.1 1.9 64 150-217 18-82 (170)
53 1bor_A Transcription factor PM 98.6 7E-09 2.4E-13 70.2 0.5 45 148-200 4-48 (56)
54 4ic3_A E3 ubiquitin-protein li 98.6 6.3E-09 2.1E-13 74.3 -0.2 44 150-202 24-68 (74)
55 2ct0_A Non-SMC element 1 homol 98.5 5.9E-08 2E-12 70.4 3.9 48 150-200 15-63 (74)
56 1jm7_B BARD1, BRCA1-associated 98.5 1.5E-08 5.1E-13 77.9 0.8 45 150-200 22-66 (117)
57 2y1n_A E3 ubiquitin-protein li 98.5 6.3E-08 2.2E-12 89.7 4.9 49 149-201 331-379 (389)
58 1wim_A KIAA0161 protein; ring 98.4 2.6E-07 8.9E-12 68.3 5.3 49 149-198 4-61 (94)
59 1vyx_A ORF K3, K3RING; zinc-bi 98.4 1.6E-07 5.6E-12 65.1 3.3 51 146-200 2-58 (60)
60 2kr4_A Ubiquitin conjugation f 98.4 1.8E-07 6.3E-12 68.5 3.6 47 149-200 13-59 (85)
61 2ecg_A Baculoviral IAP repeat- 98.4 7.6E-08 2.6E-12 68.5 0.9 44 150-202 25-69 (75)
62 2kre_A Ubiquitin conjugation f 98.3 2.8E-07 9.6E-12 69.8 3.4 47 149-200 28-74 (100)
63 2ea5_A Cell growth regulator w 98.3 1.4E-07 4.7E-12 66.7 1.4 49 147-204 12-61 (68)
64 1wgm_A Ubiquitin conjugation f 98.3 4.6E-07 1.6E-11 68.3 3.5 47 149-200 21-68 (98)
65 3k1l_B Fancl; UBC, ring, RWD, 98.2 3.1E-07 1.1E-11 84.3 1.9 53 148-200 306-372 (381)
66 2yu4_A E3 SUMO-protein ligase 98.2 7.8E-07 2.7E-11 66.1 3.7 47 149-198 6-59 (94)
67 2c2l_A CHIP, carboxy terminus 98.2 7.5E-07 2.6E-11 76.0 3.6 70 146-219 204-278 (281)
68 2yho_A E3 ubiquitin-protein li 98.2 1.9E-07 6.4E-12 67.7 -0.7 46 150-204 18-64 (79)
69 3htk_C E3 SUMO-protein ligase 97.8 5.2E-06 1.8E-10 73.4 2.5 50 148-200 179-231 (267)
70 2f42_A STIP1 homology and U-bo 97.8 8.7E-06 3E-10 68.0 3.1 48 149-200 105-152 (179)
71 3t6p_A Baculoviral IAP repeat- 97.7 7.3E-06 2.5E-10 74.6 1.2 44 150-202 295-339 (345)
72 2bay_A PRE-mRNA splicing facto 97.5 4.3E-05 1.5E-09 52.8 2.6 48 149-200 2-49 (61)
73 3vk6_A E3 ubiquitin-protein li 97.5 5.3E-05 1.8E-09 58.0 3.1 50 152-204 3-52 (101)
74 3nw0_A Non-structural maintena 96.0 0.0042 1.4E-07 53.6 3.5 47 150-199 180-227 (238)
75 2ko5_A Ring finger protein Z; 91.4 0.067 2.3E-06 40.5 1.5 44 150-200 28-72 (99)
76 2jrp_A Putative cytoplasmic pr 91.2 0.055 1.9E-06 39.7 0.8 28 67-99 33-60 (81)
77 2lbm_A Transcriptional regulat 90.7 0.21 7.1E-06 40.1 3.8 67 145-215 58-139 (142)
78 2jun_A Midline-1; B-BOX, TRIM, 89.7 0.2 6.7E-06 36.5 2.7 34 149-184 2-36 (101)
79 2ysm_A Myeloid/lymphoid or mix 85.0 0.15 5E-06 38.4 -0.4 84 112-199 9-105 (111)
80 3v43_A Histone acetyltransfera 82.7 0.24 8.2E-06 37.5 -0.1 75 120-197 22-111 (112)
81 2jne_A Hypothetical protein YF 80.3 1 3.6E-05 34.1 2.7 9 66-74 33-41 (101)
82 2kwj_A Zinc finger protein DPF 76.6 0.12 4.2E-06 39.4 -3.5 86 112-201 3-111 (114)
83 2ysm_A Myeloid/lymphoid or mix 73.1 3.5 0.00012 30.6 3.9 69 64-136 6-81 (111)
84 1weo_A Cellulose synthase, cat 73.1 5.6 0.00019 29.6 4.8 56 145-200 11-69 (93)
85 4bbq_A Lysine-specific demethy 71.0 0.56 1.9E-05 35.2 -1.0 27 171-197 80-113 (117)
86 2lri_C Autoimmune regulator; Z 67.8 3.2 0.00011 28.6 2.5 46 149-198 11-59 (66)
87 1we9_A PHD finger family prote 65.1 0.55 1.9E-05 31.8 -2.0 51 149-199 5-59 (64)
88 3ql9_A Transcriptional regulat 64.6 6.2 0.00021 30.9 3.8 54 143-200 50-113 (129)
89 3mjh_B Early endosome antigen 64.0 4.2 0.00014 24.9 2.1 18 189-206 5-22 (34)
90 3lqh_A Histone-lysine N-methyl 62.5 2.9 9.9E-05 34.5 1.6 51 151-201 3-66 (183)
91 1zfo_A LAsp-1; LIM domain, zin 62.2 2.1 7E-05 25.2 0.5 30 149-181 2-31 (31)
92 2k16_A Transcription initiatio 60.0 1.8 6.1E-05 30.1 -0.1 49 151-200 19-70 (75)
93 2dkt_A Ring finger and CHY zin 59.4 3 0.0001 33.4 1.1 31 89-119 97-127 (143)
94 2egq_A FHL1 protein; LIM domai 58.1 3.7 0.00012 27.9 1.3 41 150-201 15-58 (77)
95 1g47_A Pinch protein; LIM doma 57.1 4.9 0.00017 27.1 1.8 43 148-201 9-51 (77)
96 1f62_A Transcription factor WS 56.3 5.1 0.00017 25.6 1.7 46 152-198 2-50 (51)
97 1x61_A Thyroid receptor intera 55.9 5.9 0.0002 26.4 2.0 39 151-200 6-44 (72)
98 2k4x_A 30S ribosomal protein S 54.9 9.1 0.00031 25.5 2.8 9 78-86 18-26 (55)
99 2l5u_A Chromodomain-helicase-D 54.1 5.2 0.00018 26.9 1.5 49 146-198 7-58 (61)
100 1x63_A Skeletal muscle LIM-pro 54.1 5.1 0.00018 27.4 1.5 41 150-201 15-55 (82)
101 1iml_A CRIP, cysteine rich int 50.0 3.9 0.00013 27.8 0.3 22 173-197 47-69 (76)
102 2jvx_A NF-kappa-B essential mo 49.7 6 0.0002 23.2 1.0 16 189-204 3-18 (28)
103 2jrp_A Putative cytoplasmic pr 49.6 7.8 0.00027 28.1 1.9 15 122-137 50-64 (81)
104 1x4l_A Skeletal muscle LIM-pro 49.4 9 0.00031 25.5 2.1 41 150-201 5-47 (72)
105 1wyh_A SLIM 2, skeletal muscle 49.3 5.5 0.00019 26.5 1.0 40 151-201 6-45 (72)
106 3j20_Y 30S ribosomal protein S 48.0 8.3 0.00029 25.2 1.7 9 78-86 19-27 (50)
107 1klr_A Zinc finger Y-chromosom 47.0 14 0.00049 18.7 2.4 19 189-207 2-20 (30)
108 1wil_A KIAA1045 protein; ring 46.2 19 0.00064 26.6 3.5 44 148-196 13-74 (89)
109 2cu8_A Cysteine-rich protein 2 44.6 7.4 0.00025 26.3 1.1 40 150-201 9-48 (76)
110 2ehe_A Four and A half LIM dom 43.9 10 0.00035 25.9 1.7 40 151-201 16-55 (82)
111 1x4k_A Skeletal muscle LIM-pro 43.9 9.4 0.00032 25.3 1.5 40 151-201 6-45 (72)
112 2co8_A NEDD9 interacting prote 43.9 8.5 0.00029 26.7 1.3 42 148-201 13-54 (82)
113 1x68_A FHL5 protein; four-and- 43.8 11 0.00036 25.5 1.8 39 151-200 6-46 (76)
114 3v43_A Histone acetyltransfera 43.6 23 0.00078 26.3 3.8 26 171-196 31-62 (112)
115 2dj7_A Actin-binding LIM prote 43.0 12 0.0004 25.9 1.9 40 149-200 14-53 (80)
116 1x6a_A LIMK-2, LIM domain kina 42.9 9.7 0.00033 26.0 1.5 37 151-200 16-52 (81)
117 4ayb_P DNA-directed RNA polyme 42.4 12 0.00041 24.6 1.7 9 67-75 5-13 (48)
118 1znf_A 31ST zinc finger from X 41.9 15 0.0005 18.4 1.8 15 190-204 2-16 (27)
119 2m0e_A Zinc finger and BTB dom 41.8 17 0.00057 18.2 2.1 18 189-206 2-19 (29)
120 1ard_A Yeast transcription fac 41.6 19 0.00065 18.1 2.3 16 189-204 2-17 (29)
121 1mm2_A MI2-beta; PHD, zinc fin 41.6 5.3 0.00018 26.8 -0.1 49 148-200 7-58 (61)
122 2kvf_A Zinc finger and BTB dom 41.5 13 0.00044 18.9 1.6 16 189-204 3-18 (28)
123 2cup_A Skeletal muscle LIM-pro 41.3 9.4 0.00032 27.1 1.2 44 151-200 34-77 (101)
124 1wep_A PHF8; structural genomi 41.2 14 0.00048 25.8 2.1 48 152-200 14-65 (79)
125 2kwj_A Zinc finger protein DPF 41.1 7.3 0.00025 29.3 0.6 45 151-195 2-58 (114)
126 1qxf_A GR2, 30S ribosomal prot 40.2 11 0.00038 26.4 1.4 35 65-99 7-47 (66)
127 2kgg_A Histone demethylase jar 40.0 4.7 0.00016 26.2 -0.5 45 152-196 4-52 (52)
128 1p7a_A BF3, BKLF, kruppel-like 39.3 20 0.00069 19.5 2.3 18 188-205 10-27 (37)
129 2elr_A Zinc finger protein 406 38.3 21 0.00073 19.2 2.3 20 188-207 8-27 (36)
130 1x5w_A Zinc finger protein 64, 38.3 23 0.0008 22.5 2.8 33 188-220 36-68 (70)
131 2kdx_A HYPA, hydrogenase/ureas 37.9 9.7 0.00033 28.7 0.9 10 65-74 73-82 (119)
132 2kvh_A Zinc finger and BTB dom 37.8 16 0.00055 18.4 1.6 16 189-204 3-18 (27)
133 2kvg_A Zinc finger and BTB dom 37.7 13 0.00045 19.0 1.2 16 189-204 3-18 (27)
134 1x3h_A Leupaxin; paxillin fami 37.6 15 0.00051 24.8 1.8 38 151-201 16-53 (80)
135 1vq8_Z 50S ribosomal protein L 37.5 13 0.00045 26.8 1.5 33 77-120 26-58 (83)
136 3u5c_f 40S ribosomal protein S 37.3 16 0.00056 28.8 2.2 21 78-98 118-146 (152)
137 2d8x_A Protein pinch; LIM doma 37.2 15 0.00052 24.2 1.7 38 151-201 6-43 (70)
138 3i2d_A E3 SUMO-protein ligase 37.1 24 0.00081 32.3 3.4 48 150-200 249-299 (371)
139 2cor_A Pinch protein; LIM doma 37.0 14 0.00049 25.3 1.6 39 150-201 15-53 (79)
140 2fiy_A Protein FDHE homolog; F 36.7 27 0.00092 30.9 3.7 24 64-87 207-231 (309)
141 2dar_A PDZ and LIM domain prot 36.7 15 0.0005 25.7 1.6 40 149-201 24-63 (90)
142 2e6s_A E3 ubiquitin-protein li 36.7 9.4 0.00032 27.0 0.6 64 121-197 7-76 (77)
143 1rim_A E6APC2 peptide; E6-bind 36.6 23 0.00079 19.2 2.2 20 189-208 2-21 (33)
144 1rik_A E6APC1 peptide; E6-bind 36.1 17 0.0006 18.4 1.6 16 189-204 2-17 (29)
145 2m0f_A Zinc finger and BTB dom 35.6 19 0.00063 18.1 1.6 17 189-205 2-18 (29)
146 2m0d_A Zinc finger and BTB dom 35.6 18 0.00063 18.2 1.6 18 189-206 3-20 (30)
147 4fo9_A E3 SUMO-protein ligase 35.5 26 0.00087 31.9 3.4 47 151-200 216-265 (360)
148 3u5c_b RP61, YS20, 40S ribosom 35.1 23 0.0008 25.7 2.5 36 64-99 33-74 (82)
149 1paa_A Yeast transcription fac 35.1 23 0.00077 18.0 1.9 18 189-206 2-19 (30)
150 3j20_W 30S ribosomal protein S 35.1 16 0.00054 25.4 1.5 35 64-98 14-54 (63)
151 1ryq_A DNA-directed RNA polyme 35.0 20 0.00068 25.2 2.0 24 63-87 9-32 (69)
152 1qyp_A RNA polymerase II; tran 34.9 25 0.00087 22.9 2.5 32 79-114 16-50 (57)
153 3f6q_B LIM and senescent cell 34.3 14 0.00047 24.2 1.1 43 148-201 9-51 (72)
154 3lpe_B DNA-directed RNA polyme 34.2 16 0.00056 24.8 1.5 19 67-86 3-21 (59)
155 2cur_A Skeletal muscle LIM-pro 34.2 19 0.00066 23.6 1.9 37 151-200 6-42 (69)
156 3u5n_A E3 ubiquitin-protein li 33.9 9.3 0.00032 31.4 0.2 44 148-198 5-54 (207)
157 3shb_A E3 ubiquitin-protein li 33.8 52 0.0018 23.1 4.2 14 122-135 39-52 (77)
158 2xb1_A Pygopus homolog 2, B-ce 32.6 2.8 9.5E-05 31.4 -3.0 50 151-200 4-63 (105)
159 2elx_A Zinc finger protein 406 32.0 22 0.00075 18.9 1.6 18 188-205 6-23 (35)
160 3gox_A Restriction endonucleas 31.5 47 0.0016 27.9 4.1 73 117-200 68-148 (200)
161 2emz_A ZFP-95, zinc finger pro 31.4 51 0.0018 18.9 3.4 21 188-208 11-31 (46)
162 1nyp_A Pinch protein; LIM doma 31.4 9.7 0.00033 24.9 -0.1 38 151-201 6-43 (66)
163 1v6g_A Actin binding LIM prote 31.2 21 0.00071 24.3 1.7 38 151-201 16-53 (81)
164 2epr_A POZ-, at HOOK-, and zin 31.1 26 0.00091 20.6 2.0 9 106-114 39-47 (48)
165 2l3k_A Rhombotin-2, linker, LI 30.9 16 0.00054 27.2 1.1 14 173-186 57-70 (123)
166 2els_A Zinc finger protein 406 30.9 24 0.00081 19.1 1.6 18 188-205 8-25 (36)
167 1x4s_A Protein FON, zinc finge 30.4 17 0.0006 24.8 1.1 24 64-87 10-35 (59)
168 1twf_L ABC10-alpha, DNA-direct 30.3 24 0.00081 24.7 1.8 7 109-115 47-53 (70)
169 2ayj_A 50S ribosomal protein L 30.1 37 0.0013 22.9 2.7 26 62-87 16-42 (56)
170 2elv_A Zinc finger protein 406 30.0 24 0.00084 19.1 1.6 17 188-204 8-24 (36)
171 2ytm_A Zinc finger protein 28 30.0 46 0.0016 19.2 3.0 21 188-208 11-31 (46)
172 2yte_A Zinc finger protein 473 30.0 34 0.0012 19.1 2.3 20 188-207 9-28 (42)
173 2lvu_A Zinc finger and BTB dom 35.6 11 0.00039 18.9 0.0 15 189-203 2-16 (26)
174 1vd4_A Transcription initiatio 29.5 33 0.0011 21.7 2.3 8 81-88 17-24 (62)
175 2elt_A Zinc finger protein 406 29.5 26 0.00087 18.8 1.6 18 188-205 8-25 (36)
176 3iz6_X 40S ribosomal protein S 29.4 29 0.00098 25.5 2.2 35 65-99 36-76 (86)
177 6rxn_A Rubredoxin; electron tr 29.0 27 0.00092 22.5 1.8 13 88-100 2-15 (46)
178 2elq_A Zinc finger protein 406 28.8 27 0.00091 18.9 1.6 18 188-205 8-25 (36)
179 2xzm_6 RPS27E; ribosome, trans 28.8 22 0.00077 25.7 1.5 36 64-99 31-72 (81)
180 2v3b_B Rubredoxin 2, rubredoxi 28.6 32 0.0011 22.8 2.1 14 88-101 1-15 (55)
181 1x62_A C-terminal LIM domain p 28.5 23 0.00079 24.0 1.5 38 150-200 15-52 (79)
182 2yt5_A Metal-response element- 28.3 36 0.0012 22.5 2.4 10 150-159 52-61 (66)
183 2cuq_A Four and A half LIM dom 28.2 30 0.001 23.2 2.1 37 151-200 16-52 (80)
184 2lvt_A Zinc finger and BTB dom 34.2 12 0.00042 19.1 0.0 16 189-204 2-17 (29)
185 3o70_A PHD finger protein 13; 27.8 4.7 0.00016 27.9 -2.3 49 148-198 17-67 (68)
186 3uk3_C Zinc finger protein 217 27.6 50 0.0017 19.7 2.9 20 188-207 31-50 (57)
187 2epx_A Zinc finger protein 28 27.5 38 0.0013 19.4 2.2 20 188-207 11-30 (47)
188 1srk_A Zinc finger protein ZFP 27.4 29 0.001 18.5 1.6 18 188-205 6-23 (35)
189 2en7_A Zinc finger protein 268 27.3 40 0.0014 19.0 2.3 20 188-207 11-30 (44)
190 2yqq_A Zinc finger HIT domain- 27.3 30 0.001 23.3 1.8 16 81-97 15-30 (56)
191 2lvr_A Zinc finger and BTB dom 33.3 13 0.00045 19.0 0.0 16 189-204 3-18 (30)
192 1m3v_A FLIN4, fusion of the LI 27.0 53 0.0018 24.2 3.4 48 152-201 34-81 (122)
193 2iyb_E Testin, TESS, TES; LIM 26.7 18 0.00061 23.7 0.6 38 152-200 4-43 (65)
194 2eoq_A Zinc finger protein 224 26.7 40 0.0014 19.3 2.2 21 188-208 11-31 (46)
195 2d8z_A Four and A half LIM dom 26.5 21 0.0007 23.5 0.9 36 152-200 7-42 (70)
196 2ytb_A Zinc finger protein 32; 26.3 28 0.00096 19.5 1.4 18 188-205 10-27 (42)
197 2emk_A Zinc finger protein 28 26.3 42 0.0014 19.3 2.2 22 188-209 11-32 (46)
198 2enf_A Zinc finger protein 347 26.2 42 0.0014 19.2 2.3 18 188-205 11-28 (46)
199 1ptq_A Protein kinase C delta 26.1 40 0.0014 20.9 2.2 24 91-114 12-35 (50)
200 2elo_A Zinc finger protein 406 26.0 31 0.0011 18.7 1.5 18 188-205 8-25 (37)
201 2eos_A B-cell lymphoma 6 prote 25.8 34 0.0012 19.2 1.7 18 188-205 10-27 (42)
202 2ytr_A Zinc finger protein 347 25.8 43 0.0015 19.1 2.3 18 188-205 11-28 (46)
203 2emg_A Zinc finger protein 484 25.8 44 0.0015 19.2 2.3 19 188-206 11-29 (46)
204 2eop_A Zinc finger protein 268 25.7 45 0.0015 19.1 2.3 19 188-206 11-29 (46)
205 2eoh_A Zinc finger protein 28 25.6 43 0.0015 19.3 2.2 21 188-208 11-31 (46)
206 2eov_A Zinc finger protein 484 25.6 44 0.0015 19.1 2.3 21 188-208 11-31 (46)
207 2ku3_A Bromodomain-containing 25.6 50 0.0017 22.7 2.8 51 146-197 12-65 (71)
208 1njq_A Superman protein; zinc- 25.5 33 0.0011 19.0 1.6 19 188-206 5-23 (39)
209 2dlo_A Thyroid receptor-intera 25.5 31 0.001 23.4 1.7 37 151-200 16-52 (81)
210 2yti_A Zinc finger protein 347 25.4 44 0.0015 19.2 2.2 18 188-205 11-28 (46)
211 2i5o_A DNA polymerase ETA; zin 25.3 40 0.0014 21.0 2.0 26 188-214 8-33 (39)
212 2vpb_A Hpygo1, pygopus homolog 25.2 33 0.0011 23.3 1.8 47 150-196 8-64 (65)
213 2eou_A Zinc finger protein 473 25.0 54 0.0018 18.6 2.6 21 188-208 11-31 (44)
214 2elp_A Zinc finger protein 406 25.0 34 0.0012 18.6 1.6 20 188-207 8-28 (37)
215 2epc_A Zinc finger protein 32; 24.8 34 0.0012 19.1 1.6 21 188-208 10-30 (42)
216 1wem_A Death associated transc 24.8 7.8 0.00027 26.9 -1.6 47 151-199 17-71 (76)
217 2eoo_A ZFP-95, zinc finger pro 24.7 47 0.0016 19.1 2.3 21 188-208 11-31 (46)
218 2eon_A ZFP-95, zinc finger pro 24.5 37 0.0013 19.7 1.7 19 188-206 11-29 (46)
219 2epz_A Zinc finger protein 28 24.1 49 0.0017 18.9 2.3 19 188-206 11-29 (46)
220 2ene_A Zinc finger protein 347 24.1 35 0.0012 19.6 1.6 19 188-206 11-29 (46)
221 2ely_A Zinc finger protein 224 24.0 46 0.0016 19.1 2.1 21 188-208 11-31 (46)
222 1wig_A KIAA1808 protein; LIM d 24.0 32 0.0011 23.0 1.5 8 173-180 24-31 (73)
223 2en9_A Zinc finger protein 28 23.9 50 0.0017 19.0 2.3 20 188-207 11-30 (46)
224 2eq2_A Zinc finger protein 347 23.9 42 0.0014 19.3 1.9 19 188-206 11-29 (46)
225 2em6_A Zinc finger protein 224 23.8 50 0.0017 19.0 2.3 19 188-206 11-29 (46)
226 1bbo_A Human enhancer-binding 23.8 49 0.0017 19.7 2.3 15 190-204 2-16 (57)
227 2ytt_A Zinc finger protein 473 23.8 62 0.0021 18.5 2.7 18 188-205 11-28 (46)
228 4esj_A Type-2 restriction enzy 23.7 35 0.0012 29.7 2.0 19 79-97 35-63 (257)
229 2emp_A Zinc finger protein 347 23.7 49 0.0017 18.9 2.2 21 188-208 11-31 (46)
230 2eor_A Zinc finger protein 224 23.6 50 0.0017 18.8 2.3 21 188-208 11-31 (46)
231 2em5_A ZFP-95, zinc finger pro 23.5 36 0.0012 19.6 1.6 21 188-208 11-31 (46)
232 1v5n_A PDI-like hypothetical p 23.4 39 0.0013 24.3 1.9 10 123-132 60-69 (89)
233 2ytq_A Zinc finger protein 268 23.4 51 0.0017 18.9 2.2 17 188-204 11-27 (46)
234 2ep1_A Zinc finger protein 484 23.2 52 0.0018 18.7 2.3 19 188-206 11-29 (46)
235 2eq3_A Zinc finger protein 347 23.2 37 0.0013 19.4 1.6 19 188-206 11-29 (46)
236 2emh_A Zinc finger protein 484 23.1 53 0.0018 18.8 2.3 20 188-207 11-30 (46)
237 2eq1_A Zinc finger protein 347 23.1 52 0.0018 18.8 2.3 18 188-205 11-28 (46)
238 2em8_A Zinc finger protein 224 23.1 51 0.0017 18.9 2.2 20 188-207 11-30 (46)
239 2puy_A PHD finger protein 21A; 23.0 75 0.0025 20.7 3.2 23 111-135 6-28 (60)
240 3u6p_A Formamidopyrimidine-DNA 23.0 36 0.0012 29.3 2.0 19 78-96 245-271 (273)
241 2en3_A ZFP-95, zinc finger pro 22.9 63 0.0021 18.4 2.6 21 188-208 11-31 (46)
242 2eq4_A Zinc finger protein 224 22.8 54 0.0018 18.7 2.3 20 188-207 11-30 (46)
243 2eoj_A Zinc finger protein 268 22.7 38 0.0013 19.1 1.5 18 188-205 11-28 (44)
244 2eom_A ZFP-95, zinc finger pro 22.6 54 0.0018 18.9 2.2 20 188-207 11-30 (46)
245 2fnf_X Putative RAS effector N 22.5 53 0.0018 22.6 2.4 22 91-115 36-57 (72)
246 1wew_A DNA-binding family prot 22.4 11 0.00038 26.4 -1.2 51 149-201 15-75 (78)
247 2xzf_A Formamidopyrimidine-DNA 22.4 38 0.0013 29.0 2.0 20 78-97 242-269 (271)
248 2lv9_A Histone-lysine N-methyl 22.3 24 0.00082 25.8 0.6 32 171-202 47-80 (98)
249 2emy_A Zinc finger protein 268 22.3 47 0.0016 19.0 1.9 21 188-208 11-31 (46)
250 1vfy_A Phosphatidylinositol-3- 22.3 53 0.0018 22.4 2.4 22 80-114 13-34 (73)
251 1k3x_A Endonuclease VIII; hydr 22.3 39 0.0013 28.9 2.0 18 79-96 235-260 (262)
252 2em0_A Zinc finger protein 224 22.1 45 0.0016 19.1 1.8 20 188-207 11-30 (46)
253 2ep2_A Zinc finger protein 484 22.1 41 0.0014 19.3 1.6 21 188-208 11-31 (46)
254 3h0g_L DNA-directed RNA polyme 22.1 45 0.0016 22.9 2.0 10 106-115 37-46 (63)
255 1fv5_A First zinc finger of U- 22.0 41 0.0014 19.8 1.5 20 188-207 7-26 (36)
256 3asl_A E3 ubiquitin-protein li 22.0 1.2E+02 0.004 20.6 4.2 24 112-135 20-44 (70)
257 2ytf_A Zinc finger protein 268 22.0 41 0.0014 19.2 1.6 20 188-207 11-30 (46)
258 1k82_A Formamidopyrimidine-DNA 21.8 40 0.0014 28.9 2.0 19 78-96 240-266 (268)
259 2emi_A Zinc finger protein 484 21.8 41 0.0014 19.3 1.6 18 188-205 11-28 (46)
260 1ee8_A MUTM (FPG) protein; bet 21.7 40 0.0014 28.9 2.0 20 78-97 235-262 (266)
261 1ajj_A LR5, low-density lipopr 21.7 57 0.0019 19.3 2.2 31 123-154 5-37 (37)
262 1e8j_A Rubredoxin; iron-sulfur 21.7 56 0.0019 21.3 2.3 12 88-99 1-12 (52)
263 2epw_A Zinc finger protein 268 21.6 42 0.0014 19.2 1.5 21 188-208 11-31 (46)
264 2eow_A Zinc finger protein 347 21.6 43 0.0015 19.1 1.6 21 188-208 11-31 (46)
265 2el6_A Zinc finger protein 268 21.5 42 0.0014 19.3 1.6 19 188-206 11-29 (46)
266 2el5_A Zinc finger protein 268 21.5 43 0.0015 18.7 1.6 18 188-205 9-26 (42)
267 3a7q_B Low-density lipoprotein 21.5 73 0.0025 19.6 2.7 31 123-154 11-43 (44)
268 2adr_A ADR1; transcription reg 21.4 57 0.002 19.7 2.3 15 190-204 3-17 (60)
269 2yts_A Zinc finger protein 484 21.3 35 0.0012 19.5 1.2 20 188-207 11-30 (46)
270 2en8_A Zinc finger protein 224 21.3 44 0.0015 19.1 1.6 20 188-207 11-30 (46)
271 2eme_A Zinc finger protein 473 21.2 44 0.0015 19.1 1.6 20 188-207 11-30 (46)
272 2ep3_A Zinc finger protein 484 21.1 44 0.0015 19.2 1.6 20 188-207 11-30 (46)
273 2enh_A Zinc finger protein 28 21.1 50 0.0017 19.0 1.8 17 188-204 11-27 (46)
274 2eof_A Zinc finger protein 268 21.1 45 0.0015 18.8 1.6 20 188-207 11-30 (44)
275 2elz_A Zinc finger protein 224 21.1 50 0.0017 19.0 1.8 18 188-205 11-28 (46)
276 2emx_A Zinc finger protein 268 21.1 44 0.0015 18.9 1.6 21 188-208 9-29 (44)
277 2ytn_A Zinc finger protein 347 21.0 51 0.0017 18.9 1.9 17 188-204 11-27 (46)
278 2epv_A Zinc finger protein 268 20.9 44 0.0015 19.1 1.6 20 188-207 11-30 (44)
279 2eml_A Zinc finger protein 28 20.9 44 0.0015 19.1 1.6 18 188-205 11-28 (46)
280 2eoe_A Zinc finger protein 347 20.9 44 0.0015 19.1 1.6 20 188-207 11-30 (46)
281 2enn_A NPKC-theta, protein kin 20.8 64 0.0022 22.2 2.6 26 90-115 34-59 (77)
282 2em3_A Zinc finger protein 28 20.8 45 0.0015 19.1 1.6 21 188-208 11-31 (46)
283 2yth_A Zinc finger protein 224 20.8 51 0.0017 18.9 1.8 18 188-205 11-28 (46)
284 2enc_A Zinc finger protein 224 20.7 45 0.0015 19.1 1.6 21 188-208 11-31 (46)
285 2ept_A Zinc finger protein 32; 20.6 37 0.0013 18.9 1.2 17 188-204 9-25 (41)
286 2eq0_A Zinc finger protein 347 20.6 46 0.0016 19.1 1.6 18 188-205 11-28 (46)
287 1rfh_A RAS association (ralgds 20.5 69 0.0024 21.0 2.6 11 105-115 34-44 (59)
288 2emm_A ZFP-95, zinc finger pro 20.5 46 0.0016 19.0 1.6 21 188-208 11-31 (46)
289 1pft_A TFIIB, PFTFIIBN; N-term 20.5 74 0.0025 19.9 2.7 7 80-86 7-13 (50)
290 2en2_A B-cell lymphoma 6 prote 20.5 49 0.0017 18.4 1.7 20 188-207 10-29 (42)
291 2ysp_A Zinc finger protein 224 20.3 39 0.0013 19.4 1.2 18 188-205 11-28 (46)
292 2eoy_A Zinc finger protein 473 20.3 46 0.0016 19.1 1.5 18 188-205 11-28 (46)
293 2yto_A Zinc finger protein 484 20.2 47 0.0016 19.1 1.6 21 188-208 11-31 (46)
294 3p8b_A DNA-directed RNA polyme 20.1 43 0.0015 24.2 1.6 22 65-87 23-44 (81)
295 2emj_A Zinc finger protein 28 20.0 54 0.0018 18.8 1.8 21 188-208 11-31 (46)
No 1
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=100.00 E-value=3.7e-57 Score=367.95 Aligned_cols=139 Identities=42% Similarity=1.050 Sum_probs=131.5
Q ss_pred CCccccccCCCCccCcccccccceeecCCCCCcccCchhHHhhhcCCCCCCCCccccccccceeecCCCCccccccccCC
Q 027589 3 GSANERITFGKMGYGCKHYRRRCRIRAPCCNEIFDCRHCHNEAASMLRNPYDRHELVRQDVKQVICSVCDTEQPVAQVCT 82 (221)
Q Consensus 3 ~~~~~~~~~~~~~~gC~HY~r~c~l~~pCC~~~ypCr~CHde~~~~~~~~~~~H~~~r~~~~~v~C~~C~~~q~~~~~C~ 82 (221)
++....+|++++++||+||+|+|+|+||||++|||||+||||++ +|+++|+++++|+||+|+++|++++.|+
T Consensus 4 ~~~~~~~~~~~~~~gC~HY~r~~~lr~pCC~k~y~Cr~CHde~~--------dH~l~r~~~~~vlCg~C~~~q~~~~~C~ 75 (143)
T 2dkt_A 4 GSSGGVRNLAQGPRGCEHYDRACLLKAPCCDKLYTCRLCHDTNE--------DHQLDRFKVKEVQCINCEKLQHAQQTCE 75 (143)
T ss_dssp CCCCCCCCCCCCSSSCSSCCCSEEEEETTTTEEESSHHHHHHTS--------SSCCCSSSCCCEEESSSCCEECSCSBCS
T ss_pred CCCCcccccccCcCCCcccCCCeeEECCCCCCccchhhhhcccc--------ccccchhccceeeecccCccccccCcCC
Confidence 44555789999999999999999999999999999999999974 6999999999999999999999999999
Q ss_pred CCCCCcceeeccccccccCCCCcCeeeCCCCCcceeCCccceeecCccCccccccccCcceeecCCCCC
Q 027589 83 NCGVNMGEYFCDICKFYDDDIEKGQFHCDDCGICRIGGRENYFHCKRCGSCYSTSLRNNHLCIENSMHH 151 (221)
Q Consensus 83 ~Cg~~f~~y~C~~C~l~dd~~~k~~yHC~~CgiCR~G~~~~~fHC~~C~~C~s~~~~~~H~C~e~~~~~ 151 (221)
+||+.||+|||+|||||| ++|+||||++|||||||+++|||||++||+|||++|+++|+|+|+++++
T Consensus 76 ~Cg~~f~~Y~C~~C~l~d--~~k~~yHC~~CgiCR~G~~~~ffHC~~C~~C~s~~l~~~H~C~e~~~~s 142 (143)
T 2dkt_A 76 DCSTLFGEYYCSICHLFD--KDKRQYHCESCGICRIGPKEDFFHCLKCNLCLTTNLRGKHKCIESGPSS 142 (143)
T ss_dssp SSCCBSCSEECSSSCCEE--CSSSEEEETTTTEEEESCGGGEEEETTTTEEEEGGGSSSSCCSCCCSCC
T ss_pred CCCccceeeEeceeeccc--CCCceecCCCCCceeccCCcCcEECCcCCeeeccccCcCcccCccCccC
Confidence 999999999999999997 4699999999999999999999999999999999999999999999864
No 2
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=99.47 E-value=1.7e-14 Score=96.45 Aligned_cols=52 Identities=42% Similarity=0.875 Sum_probs=45.5
Q ss_pred CCCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 148 SMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 148 ~~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
+.+..||||++.+.++.+.+.+|+|||.||..|+.+|++. +.+||+||+.+.
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 3 SGSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKE-GYRCPLCSGPSS 54 (55)
T ss_dssp SCCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHH-TCCCTTSCCSSC
T ss_pred CCCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHc-CCcCCCCCCcCC
Confidence 4567899999998777677889999999999999999985 589999998874
No 3
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=1.4e-13 Score=97.61 Aligned_cols=56 Identities=23% Similarity=0.694 Sum_probs=46.8
Q ss_pred cCCCCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccchh
Q 027589 146 ENSMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDMS 203 (221)
Q Consensus 146 e~~~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~dm~ 203 (221)
+...+..|+||++.+ .....+.+|+|||.||..|+.+|++. +.+||+||+.+..+.
T Consensus 11 ~~~~~~~C~IC~~~~-~~~~~~~~~~C~H~f~~~Ci~~~~~~-~~~CP~Cr~~~~~~~ 66 (74)
T 2ep4_A 11 ELNLHELCAVCLEDF-KPRDELGICPCKHAFHRKCLIKWLEV-RKVCPLCNMPVLQLA 66 (74)
T ss_dssp CCCCSCBCSSSCCBC-CSSSCEEEETTTEEEEHHHHHHHHHH-CSBCTTTCCBCSSCC
T ss_pred cCCCCCCCcCCCccc-CCCCcEEEcCCCCEecHHHHHHHHHc-CCcCCCcCccccccc
Confidence 445577899999995 44467788999999999999999985 579999999998653
No 4
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=99.40 E-value=1.1e-13 Score=92.65 Aligned_cols=49 Identities=29% Similarity=0.729 Sum_probs=41.3
Q ss_pred CCCCccchhhcccCCCceeeec-cCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 150 HHHCPICYEYLFDSLRNTTVMK-CGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~-CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
+..|+||++.+.+ .+.+..|+ |||.||..|+.+|++ .+.+||+||+.+.
T Consensus 5 ~~~C~IC~~~~~~-~~~~~~~~~C~H~f~~~Ci~~w~~-~~~~CP~Cr~~~~ 54 (55)
T 1iym_A 5 GVECAVCLAELED-GEEARFLPRCGHGFHAECVDMWLG-SHSTCPLCRLTVV 54 (55)
T ss_dssp SCCCTTTCCCCCT-TSCCEECSSSCCEECTTHHHHTTT-TCCSCSSSCCCSC
T ss_pred CCcCccCCccccC-CCceEECCCCCCcccHHHHHHHHH-cCCcCcCCCCEeE
Confidence 4689999999654 45677787 999999999999998 4789999998864
No 5
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=99.39 E-value=2.1e-13 Score=95.41 Aligned_cols=53 Identities=23% Similarity=0.532 Sum_probs=44.5
Q ss_pred CCCCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 147 NSMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 147 ~~~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
...+..|+||++.+. ....++.|+|||.||..|+.+|+.. +.+||+||+.+..
T Consensus 11 ~~~~~~C~IC~~~~~-~~~~~~~~~C~H~fc~~Ci~~~~~~-~~~CP~Cr~~~~~ 63 (69)
T 2kiz_A 11 EDTEEKCTICLSILE-EGEDVRRLPCMHLFHQVCVDQWLIT-NKKCPICRVDIEA 63 (69)
T ss_dssp TTCCCSBTTTTBCCC-SSSCEEECTTSCEEEHHHHHHHHHH-CSBCTTTCSBSCS
T ss_pred CCCCCCCeeCCcccc-CCCcEEEeCCCCHHHHHHHHHHHHc-CCCCcCcCccccC
Confidence 445678999999854 4467888999999999999999985 6799999998863
No 6
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.39 E-value=9.4e-14 Score=98.97 Aligned_cols=53 Identities=26% Similarity=0.590 Sum_probs=44.6
Q ss_pred CCCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccch
Q 027589 148 SMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDM 202 (221)
Q Consensus 148 ~~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~dm 202 (221)
..+..|+||++.+ ...+.++.|||||.||..|+.+|++. +.+||+||+.+...
T Consensus 21 ~~~~~C~IC~~~~-~~~~~~~~l~C~H~fh~~Ci~~w~~~-~~~CP~Cr~~~~~~ 73 (75)
T 1x4j_A 21 SEQTLCVVCMCDF-ESRQLLRVLPCNHEFHAKCVDKWLKA-NRTCPICRADSGPS 73 (75)
T ss_dssp SSCCEETTTTEEC-CBTCEEEEETTTEEEETTHHHHHHHH-CSSCTTTCCCCCCC
T ss_pred CCCCCCeECCccc-CCCCeEEEECCCCHhHHHHHHHHHHc-CCcCcCcCCcCCCC
Confidence 3456799999995 44567889999999999999999984 68999999988653
No 7
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=3.4e-13 Score=98.31 Aligned_cols=49 Identities=22% Similarity=0.539 Sum_probs=39.2
Q ss_pred CCCCccchhhcccCCCceeee-ccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 150 HHHCPICYEYLFDSLRNTTVM-KCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L-~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
+..||||++++..+ +.+++| +|||.||..||++||+. +.+||+||+.+.
T Consensus 26 ~~~C~iC~~~~~~~-~~~~~~~~C~H~FH~~Ci~~Wl~~-~~~CP~CR~~~~ 75 (81)
T 2ecl_A 26 MDACLRCQAENKQE-DCVVVWGECNHSFHNCCMSLWVKQ-NNRCPLCQQDWV 75 (81)
T ss_dssp TSCCTTHHHHTCTT-TCCEEEETTSCEEEHHHHHHHTTT-CCBCTTTCCBCC
T ss_pred hccCcccccccCCC-ceEEEeCCCCCccChHHHHHHHHh-CCCCCCcCCCcc
Confidence 45688888885544 445555 59999999999999984 679999999875
No 8
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=99.34 E-value=5.8e-13 Score=101.63 Aligned_cols=56 Identities=25% Similarity=0.434 Sum_probs=43.5
Q ss_pred CCCCCCCccchhhcccCC--------------CceeeeccCCccCHHHHHHHHh----cCcCCCCCCcccccch
Q 027589 147 NSMHHHCPICYEYLFDSL--------------RNTTVMKCGHTMHCECYHEMIK----RDKYCCPICSKSVIDM 202 (221)
Q Consensus 147 ~~~~~~CpICle~lf~s~--------------~~v~~L~CGH~~H~~C~~~~l~----~~~~~CPiCrksi~dm 202 (221)
...+..|||||++|.+.. ..++.|+|||.||..||.+|+. ..+.+||+||+.+...
T Consensus 22 ~~~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T 1v87_A 22 VAPEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp SCCSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred CCCCCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCC
Confidence 344678999999975432 2344789999999999999995 2467999999988753
No 9
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=99.34 E-value=4.4e-13 Score=99.51 Aligned_cols=51 Identities=24% Similarity=0.511 Sum_probs=43.3
Q ss_pred CCCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 148 SMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 148 ~~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
..+..|+||++.+.. .+.++.|||||.||..|+++|+. .+.+||+||+.+.
T Consensus 38 ~~~~~C~IC~~~~~~-~~~~~~l~C~H~Fh~~Ci~~wl~-~~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 38 GQEMCCPICCSEYVK-GDVATELPCHHYFHKPCVSIWLQ-KSGTCPVCRCMFP 88 (91)
T ss_dssp SSCSEETTTTEECCT-TCEEEEETTTEEEEHHHHHHHHT-TTCBCTTTCCBSS
T ss_pred CCCCCCcccChhhcC-CCcEEecCCCChHHHHHHHHHHH-cCCcCcCcCccCC
Confidence 345679999998544 46788899999999999999998 5789999999875
No 10
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.32 E-value=6.5e-13 Score=94.94 Aligned_cols=52 Identities=25% Similarity=0.609 Sum_probs=43.8
Q ss_pred CCCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 148 SMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 148 ~~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
..+..|+||++.+ .....+.+|+|||.||..|+.+|++ .+.+||+||+.+..
T Consensus 13 ~~~~~C~IC~~~~-~~~~~~~~~~C~H~fc~~Ci~~~~~-~~~~CP~Cr~~~~~ 64 (78)
T 2ect_A 13 GSGLECPVCKEDY-ALGESVRQLPCNHLFHDSCIVPWLE-QHDSCPVCRKSLTG 64 (78)
T ss_dssp SSSCCCTTTTSCC-CTTSCEEECTTSCEEETTTTHHHHT-TTCSCTTTCCCCCC
T ss_pred CCCCCCeeCCccc-cCCCCEEEeCCCCeecHHHHHHHHH-cCCcCcCcCCccCC
Confidence 3456899999985 4446778899999999999999998 46899999999864
No 11
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=99.29 E-value=1e-12 Score=91.86 Aligned_cols=53 Identities=28% Similarity=0.636 Sum_probs=43.6
Q ss_pred CCCCCCccchhhcccC---CCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 148 SMHHHCPICYEYLFDS---LRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 148 ~~~~~CpICle~lf~s---~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
..+..||||++.+.+. .+.+..++|||.||..|+.+|++. +.+||+||+.+..
T Consensus 8 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-~~~CP~Cr~~~~~ 63 (71)
T 3ng2_A 8 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-ANTCPTCRKKINH 63 (71)
T ss_dssp TTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHH-CSBCTTTCCBCCC
T ss_pred CCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHc-CCCCCCCCCccCh
Confidence 4467899999997553 244578999999999999999984 6799999999863
No 12
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.29 E-value=1.2e-12 Score=90.70 Aligned_cols=52 Identities=29% Similarity=0.646 Sum_probs=42.6
Q ss_pred CCCCCCccchhhcccC---CCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 148 SMHHHCPICYEYLFDS---LRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 148 ~~~~~CpICle~lf~s---~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
.....||||++.+.+. ...+..++|||.||..|+.+|+.. +.+||+||+.|.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-ANTCPTCRKKIN 67 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH-CSSCTTTCCCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc-CCCCCCCCCccC
Confidence 3456799999997653 234478999999999999999984 789999999875
No 13
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=99.28 E-value=1.6e-12 Score=88.75 Aligned_cols=51 Identities=27% Similarity=0.663 Sum_probs=42.6
Q ss_pred CCCCccchhhcccC---CCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 150 HHHCPICYEYLFDS---LRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 150 ~~~CpICle~lf~s---~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
+..||||++.+.+. .+.+..++|||.||..|+.+|++. +.+||+||+.+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-~~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-ANTCPTCRKKINH 56 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH-CSBCTTTCCBCTT
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHc-CCCCCCCCccCCc
Confidence 56799999997552 244578899999999999999985 7899999999863
No 14
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.25 E-value=4.3e-12 Score=87.95 Aligned_cols=51 Identities=25% Similarity=0.522 Sum_probs=41.7
Q ss_pred CCCCccchh-hcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 150 HHHCPICYE-YLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 150 ~~~CpICle-~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
+..||||++ .+.+....+..++|||+|+..|+.+|+..+..+||+||+.+.
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 54 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLR 54 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCS
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCccc
Confidence 467999999 655543344568999999999999997756788999999986
No 15
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=99.23 E-value=3.8e-12 Score=88.49 Aligned_cols=50 Identities=26% Similarity=0.641 Sum_probs=42.3
Q ss_pred CCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccch
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDM 202 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~dm 202 (221)
.+..||||++.+. +++..++|||.||..|+.+|++. +.+||+||+.+..+
T Consensus 4 ~~~~C~IC~~~~~---~~~~~~~C~H~fc~~Ci~~~~~~-~~~CP~Cr~~~~~~ 53 (68)
T 1chc_A 4 VAERCPICLEDPS---NYSMALPCLHAFCYVCITRWIRQ-NPTCPLCKVPVESV 53 (68)
T ss_dssp CCCCCSSCCSCCC---SCEEETTTTEEESTTHHHHHHHH-SCSTTTTCCCCCCE
T ss_pred CCCCCeeCCcccc---CCcEecCCCCeeHHHHHHHHHhC-cCcCcCCChhhHhh
Confidence 3568999999853 35688999999999999999984 68999999998754
No 16
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=99.19 E-value=1.1e-11 Score=95.50 Aligned_cols=48 Identities=19% Similarity=0.429 Sum_probs=35.5
Q ss_pred CCCccchhhcccC---CCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccc
Q 027589 151 HHCPICYEYLFDS---LRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSV 199 (221)
Q Consensus 151 ~~CpICle~lf~s---~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi 199 (221)
..|+||++++.++ ...+..|+|||.||..||++||. .+.+||+||+.+
T Consensus 49 ~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~-~~~~CP~Cr~~~ 99 (106)
T 3dpl_R 49 DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLK-TRQVCPLDNREW 99 (106)
T ss_dssp SCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHT-TCSBCSSSCSBC
T ss_pred CcCchhhccccccCCccceEeecccCcEECHHHHHHHHH-cCCcCcCCCCcc
Confidence 3455555443221 12467789999999999999998 478999999985
No 17
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.19 E-value=1.2e-11 Score=89.61 Aligned_cols=52 Identities=29% Similarity=0.702 Sum_probs=42.9
Q ss_pred CCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcC--cCCCCCCccccc
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRD--KYCCPICSKSVI 200 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~--~~~CPiCrksi~ 200 (221)
....||||++.+.++....+.|+|||.||..|+.+|+... ..+||+||+.+.
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 67 (88)
T 2ct2_A 14 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITR 67 (88)
T ss_dssp SCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBC
T ss_pred CCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCccc
Confidence 3467999999976654447788999999999999999853 489999999875
No 18
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=99.18 E-value=1.5e-12 Score=95.16 Aligned_cols=61 Identities=23% Similarity=0.539 Sum_probs=48.5
Q ss_pred CCCCCccchhhcccCCCceeeec--cCCccCHHHHHHHHhcCcCCCCCCcccccchhHHHHHHHH
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMK--CGHTMHCECYHEMIKRDKYCCPICSKSVIDMSRTWKRIDE 211 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~--CGH~~H~~C~~~~l~~~~~~CPiCrksi~dm~~~~~~lD~ 211 (221)
.+..||||+|.+.. .++.++| |||.|+..|+..++....++||+||+.+......|+++|+
T Consensus 10 ~~~~CpICle~~~~--~d~~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~~~~~~~~~~~ 72 (78)
T 1e4u_A 10 DPVECPLCMEPLEI--DDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDPAVYKPLSQ 72 (78)
T ss_dssp CCCBCTTTCCBCCT--TTTTCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCSSCSSCCCSCCC
T ss_pred cCCcCCccCccCcc--ccccccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccCCCchhhccCCH
Confidence 35689999997532 2344555 9999999999999865678999999999987777777664
No 19
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.16 E-value=1.8e-12 Score=90.87 Aligned_cols=51 Identities=22% Similarity=0.562 Sum_probs=42.7
Q ss_pred CCCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccchhH
Q 027589 148 SMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDMSR 204 (221)
Q Consensus 148 ~~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~dm~~ 204 (221)
.....||||++.+.+ ..|+|||.||..|+.+|+. .+.+||+||+.+.....
T Consensus 13 ~~~~~C~IC~~~~~~-----~~~~CgH~fc~~Ci~~~~~-~~~~CP~Cr~~~~~~~~ 63 (70)
T 2ecn_A 13 TDEEECCICMDGRAD-----LILPCAHSFCQKCIDKWSD-RHRNCPICRLQMTGANE 63 (70)
T ss_dssp CCCCCCSSSCCSCCS-----EEETTTEEECHHHHHHSSC-CCSSCHHHHHCTTCCCC
T ss_pred CCCCCCeeCCcCccC-----cccCCCCcccHHHHHHHHH-CcCcCCCcCCcccCCCc
Confidence 345689999998532 6799999999999999998 57899999999876543
No 20
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.13 E-value=1.9e-11 Score=86.19 Aligned_cols=49 Identities=16% Similarity=0.422 Sum_probs=40.6
Q ss_pred CCCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 148 SMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 148 ~~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
..+..|+||++.+. ..+.|+|||.||..|+.+|+. .+.+||+||+.+..
T Consensus 13 ~~~~~C~IC~~~~~----~~~~~~CgH~fC~~Ci~~~~~-~~~~CP~Cr~~~~~ 61 (71)
T 2d8t_A 13 LTVPECAICLQTCV----HPVSLPCKHVFCYLCVKGASW-LGKRCALCRQEIPE 61 (71)
T ss_dssp SSCCBCSSSSSBCS----SEEEETTTEEEEHHHHHHCTT-CSSBCSSSCCBCCH
T ss_pred CCCCCCccCCcccC----CCEEccCCCHHHHHHHHHHHH-CCCcCcCcCchhCH
Confidence 34567999999853 246789999999999999998 46899999999863
No 21
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.12 E-value=3.2e-11 Score=85.21 Aligned_cols=49 Identities=33% Similarity=0.578 Sum_probs=40.7
Q ss_pred CCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
.+..||||++.+.+ ++..++|||.||..|+.+|+.. +.+||+||+.+..
T Consensus 14 ~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~-~~~CP~Cr~~~~~ 62 (72)
T 2djb_A 14 PYILCSICKGYLID---ATTITECLHTFCKSCIVRHFYY-SNRCPKCNIVVHQ 62 (72)
T ss_dssp GGGSCTTTSSCCSS---CEECSSSCCEECHHHHHHHHHH-CSSCTTTCCCCCS
T ss_pred CCCCCCCCChHHHC---cCEECCCCCHHHHHHHHHHHHc-CCcCCCcCcccCc
Confidence 35679999998543 4555699999999999999984 7899999998863
No 22
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.11 E-value=2.6e-11 Score=87.35 Aligned_cols=48 Identities=25% Similarity=0.497 Sum_probs=40.0
Q ss_pred CCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
....||||++.+.+ + .+++|||+||..|+.+|+. ...+||+||+.+..
T Consensus 14 ~~~~C~IC~~~~~~---p-~~~~CgH~fC~~Ci~~~~~-~~~~CP~Cr~~~~~ 61 (81)
T 2csy_A 14 IPFRCFICRQAFQN---P-VVTKCRHYFCESCALEHFR-ATPRCYICDQPTGG 61 (81)
T ss_dssp CCSBCSSSCSBCCS---E-EECTTSCEEEHHHHHHHHH-HCSBCSSSCCBCCS
T ss_pred CCCCCcCCCchhcC---e-eEccCCCHhHHHHHHHHHH-CCCcCCCcCccccc
Confidence 35679999998532 3 4689999999999999998 47899999999863
No 23
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.10 E-value=3.3e-11 Score=92.69 Aligned_cols=52 Identities=29% Similarity=0.658 Sum_probs=43.1
Q ss_pred CCCCCCccchhhcccC---CCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 148 SMHHHCPICYEYLFDS---LRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 148 ~~~~~CpICle~lf~s---~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
+.+..||||++.+.+. .+.++.++|||+||..|+.+|++ .+.+||+||+.+.
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~-~~~~CP~Cr~~~~ 59 (133)
T 4ap4_A 5 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK-NANTCPTCRKKIN 59 (133)
T ss_dssp CCSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHT-TCSBCTTTCCBCT
T ss_pred CCCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHH-hCCCCCCCCCcCc
Confidence 3456899999986543 34458899999999999999998 4679999999986
No 24
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=99.08 E-value=1e-10 Score=92.65 Aligned_cols=46 Identities=35% Similarity=0.865 Sum_probs=39.3
Q ss_pred CCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 151 HHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 151 ~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
..||||++.+.+ .+.|||||.||..|+..|+. .+.+||+||+.+..
T Consensus 54 ~~C~iC~~~~~~----~~~~~CgH~fc~~Ci~~~~~-~~~~CP~Cr~~~~~ 99 (138)
T 4ayc_A 54 LQCIICSEYFIE----AVTLNCAHSFCSYCINEWMK-RKIECPICRKDIKS 99 (138)
T ss_dssp SBCTTTCSBCSS----EEEETTSCEEEHHHHHHHTT-TCSBCTTTCCBCCC
T ss_pred CCCcccCcccCC----ceECCCCCCccHHHHHHHHH-cCCcCCCCCCcCCC
Confidence 469999998532 45689999999999999998 47899999999864
No 25
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.06 E-value=8.2e-11 Score=81.63 Aligned_cols=48 Identities=21% Similarity=0.556 Sum_probs=39.5
Q ss_pred CCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
+..||||++.+.+ ++ .++|||.||..|+.+|+...+.+||+||+.+..
T Consensus 15 ~~~C~IC~~~~~~---p~-~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 15 KYKCEKCHLVLCS---PK-QTECGHRFCESCMAALLSSSSPKCTACQESIVK 62 (66)
T ss_dssp CEECTTTCCEESS---CC-CCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCT
T ss_pred CCCCCCCChHhcC---ee-ECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCCh
Confidence 4579999998543 33 389999999999999996567899999999863
No 26
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.05 E-value=7e-11 Score=86.72 Aligned_cols=52 Identities=29% Similarity=0.593 Sum_probs=41.0
Q ss_pred CCCCCCCccchhhcccCCCceeeeccC-----CccCHHHHHHHHhcC-cCCCCCCccccc
Q 027589 147 NSMHHHCPICYEYLFDSLRNTTVMKCG-----HTMHCECYHEMIKRD-KYCCPICSKSVI 200 (221)
Q Consensus 147 ~~~~~~CpICle~lf~s~~~v~~L~CG-----H~~H~~C~~~~l~~~-~~~CPiCrksi~ 200 (221)
.+.+..|+||++++ +..+++ ++||+ |+||..||++||... +.+||+||..+.
T Consensus 12 ~~~~~~C~IC~~~~-~~~~~l-~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~ 69 (80)
T 2d8s_A 12 PSSQDICRICHCEG-DDESPL-ITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFI 69 (80)
T ss_dssp CTTSCCCSSSCCCC-CSSSCE-ECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCC
T ss_pred CCCCCCCeEcCccc-cCCCee-EeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeee
Confidence 34467899999984 433444 68996 999999999999853 369999999885
No 27
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.05 E-value=1.2e-10 Score=81.77 Aligned_cols=49 Identities=29% Similarity=0.735 Sum_probs=39.7
Q ss_pred CCCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhc--CcCCCCCCccccc
Q 027589 148 SMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKR--DKYCCPICSKSVI 200 (221)
Q Consensus 148 ~~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~--~~~~CPiCrksi~ 200 (221)
..+..||||++.+. ...+|+|||.||..|+.+|+.. ...+||+||+.+.
T Consensus 18 ~~~~~C~IC~~~~~----~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 68 (73)
T 2ysl_A 18 QEEVICPICLDILQ----KPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVR 68 (73)
T ss_dssp CCCCBCTTTCSBCS----SEEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCC
T ss_pred ccCCEeccCCcccC----CeEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCC
Confidence 34568999999753 2456799999999999999962 4679999999875
No 28
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=99.04 E-value=2.7e-10 Score=81.15 Aligned_cols=49 Identities=18% Similarity=0.449 Sum_probs=40.5
Q ss_pred CCCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 148 SMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 148 ~~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
..+..||||++.|.+ + .+++|||+|++.|+.+|+..++.+||+||+.+.
T Consensus 6 ~~~~~C~IC~~~~~~---P-v~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~ 54 (78)
T 1t1h_A 6 PEYFRCPISLELMKD---P-VIVSTGQTYERSSIQKWLDAGHKTCPKSQETLL 54 (78)
T ss_dssp SSSSSCTTTSCCCSS---E-EEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCS
T ss_pred cccCCCCCccccccC---C-EEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCC
Confidence 345689999997532 3 457999999999999999855789999999985
No 29
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=99.02 E-value=9.9e-11 Score=88.09 Aligned_cols=48 Identities=21% Similarity=0.483 Sum_probs=40.4
Q ss_pred CCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
+..||||++.+. +++..++|||.||..||.+|+.....+||+||+.+.
T Consensus 22 ~~~C~IC~~~~~---~p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~ 69 (100)
T 3lrq_A 22 VFRCFICMEKLR---DARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQ 69 (100)
T ss_dssp HTBCTTTCSBCS---SEEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCccCCcccc---CccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCC
Confidence 457999999853 356559999999999999999864479999999985
No 30
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=99.01 E-value=6.6e-11 Score=84.25 Aligned_cols=51 Identities=24% Similarity=0.588 Sum_probs=40.3
Q ss_pred CCCCCccchhhcccCCCceeeec-cCCccCHHHHHHHHhcC-cCCCCCCcccccchh
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMK-CGHTMHCECYHEMIKRD-KYCCPICSKSVIDMS 203 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~-CGH~~H~~C~~~~l~~~-~~~CPiCrksi~dm~ 203 (221)
.+..||||++.+.+ + ++|+ |||.||..|+.+|+... ..+||+||+.+....
T Consensus 14 ~~~~C~IC~~~~~~---p-~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~ 66 (74)
T 2yur_A 14 DELLCLICKDIMTD---A-VVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPD 66 (74)
T ss_dssp GGGSCSSSCCCCTT---C-EECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSCCTT
T ss_pred CCCCCcCCChHHhC---C-eEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCCCcc
Confidence 35679999998543 3 4588 99999999999999843 369999999876543
No 31
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=99.00 E-value=4.4e-11 Score=93.98 Aligned_cols=50 Identities=22% Similarity=0.555 Sum_probs=0.9
Q ss_pred CCCCCccchhhcccC--------------CCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccc
Q 027589 149 MHHHCPICYEYLFDS--------------LRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSV 199 (221)
Q Consensus 149 ~~~~CpICle~lf~s--------------~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi 199 (221)
.+.+|+||+++|.+. ...+..++|||.||..||++||.. +.+||+||+.+
T Consensus 47 ~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~-~~~CP~Cr~~~ 110 (117)
T 4a0k_B 47 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT-RQVCPLDNREW 110 (117)
T ss_dssp CC---------------------------------------------------------------
T ss_pred CCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHc-CCcCCCCCCee
Confidence 356899999886431 113344699999999999999984 78999999875
No 32
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=98.98 E-value=2e-10 Score=89.09 Aligned_cols=48 Identities=21% Similarity=0.614 Sum_probs=40.1
Q ss_pred CCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
+..||||++.+.+ .+.++|||.|+..|+..|+.....+||+||+.+..
T Consensus 52 ~~~C~IC~~~~~~----p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 52 TFQCICCQELVFR----PITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp HTBCTTTSSBCSS----EEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred CCCCCcCChHHcC----cEEeeCCCcccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 3579999998542 34579999999999999998666799999999964
No 33
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=98.98 E-value=2.9e-10 Score=87.37 Aligned_cols=53 Identities=28% Similarity=0.636 Sum_probs=43.1
Q ss_pred CCCCCCccchhhcccC---CCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 148 SMHHHCPICYEYLFDS---LRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 148 ~~~~~CpICle~lf~s---~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
.....|+||++.+.+. ...+..++|||.||..|+++|+.. +.+||+||+++..
T Consensus 70 ~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-~~~CP~Cr~~~~~ 125 (133)
T 4ap4_A 70 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-ANTCPTCRKKINH 125 (133)
T ss_dssp SSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHH-CSBCTTTCCBCCG
T ss_pred CCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHc-CCCCCCCCCcCCh
Confidence 4467899999986542 234478899999999999999984 6799999999863
No 34
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.97 E-value=3.7e-10 Score=77.44 Aligned_cols=43 Identities=28% Similarity=0.807 Sum_probs=35.0
Q ss_pred CCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhc--CcCCCCCC
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKR--DKYCCPIC 195 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~--~~~~CPiC 195 (221)
.+..||||++.+.+ .++|+|||.||..|+.+|++. ...+||+|
T Consensus 19 ~~~~C~IC~~~~~~----p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 19 EEVICPICLDILQK----PVTIDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCBCTTTCSBCSS----CEECTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred cCCCCCcCCchhCC----eEEeCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 35679999998542 345799999999999999974 46789998
No 35
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=98.96 E-value=3.1e-10 Score=92.04 Aligned_cols=47 Identities=28% Similarity=0.725 Sum_probs=40.2
Q ss_pred CCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 151 HHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 151 ~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
..||||++.+.+ ++..++|||.||..|+..|+...+.+||+||+.+.
T Consensus 55 ~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 101 (165)
T 2ckl_B 55 LMCPICLDMLKN---TMTTKECLHRFCADCIITALRSGNKECPTCRKKLV 101 (165)
T ss_dssp HBCTTTSSBCSS---EEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCC
T ss_pred CCCcccChHhhC---cCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCC
Confidence 479999998543 56666999999999999999865789999999985
No 36
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.96 E-value=3.9e-10 Score=75.62 Aligned_cols=43 Identities=28% Similarity=0.892 Sum_probs=34.8
Q ss_pred CCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhc--CcCCCCCC
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKR--DKYCCPIC 195 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~--~~~~CPiC 195 (221)
.+..||||++.+.+ + +.|+|||.||..|+.+|+.. ...+||+|
T Consensus 14 ~~~~C~IC~~~~~~---p-~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKE---P-VIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSS---C-CCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred cCCCCccCCcccCc---c-EeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 35679999998543 2 45899999999999999653 57899998
No 37
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=98.95 E-value=1.9e-10 Score=88.03 Aligned_cols=65 Identities=20% Similarity=0.353 Sum_probs=48.7
Q ss_pred CCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc--hhHHHHHHHHHHHhCCC
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID--MSRTWKRIDEEVSLFNL 218 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d--m~~~~~~lD~~i~~~pm 218 (221)
+..||||++.+.+ ++ .++|||.|+..|+.+|+.....+||+||+.+.. +....+.+.++|...++
T Consensus 23 ~~~C~IC~~~~~~---p~-~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~~l~~~i~~l~v 89 (116)
T 1rmd_A 23 SISCQICEHILAD---PV-ETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLESPVKSFLNILNSLMV 89 (116)
T ss_dssp HTBCTTTCSBCSS---EE-ECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCBCCCHHHHHHHHHCEE
T ss_pred CCCCCCCCcHhcC---cE-EcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCHhhccccHHHHHHHHHHhcC
Confidence 4579999998532 34 489999999999999998656899999999863 22234566666665543
No 38
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=98.94 E-value=3.1e-10 Score=84.62 Aligned_cols=47 Identities=28% Similarity=0.671 Sum_probs=39.5
Q ss_pred CCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
+..||||++.+.+ ++..++|||.||..|+..|+. .+.+||+||+.+.
T Consensus 22 ~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~-~~~~CP~Cr~~~~ 68 (99)
T 2y43_A 22 LLRCGICFEYFNI---AMIIPQCSHNYCSLCIRKFLS-YKTQCPTCCVTVT 68 (99)
T ss_dssp HTBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHHT-TCCBCTTTCCBCC
T ss_pred CCCcccCChhhCC---cCEECCCCCHhhHHHHHHHHH-CCCCCCCCCCcCC
Confidence 4579999998542 555559999999999999998 4689999999887
No 39
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.93 E-value=6.4e-10 Score=79.40 Aligned_cols=48 Identities=27% Similarity=0.605 Sum_probs=39.6
Q ss_pred CCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcC-----cCCCCCCccccc
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRD-----KYCCPICSKSVI 200 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~-----~~~CPiCrksi~ 200 (221)
.+..||||++.+.+ + .+++|||.|+..|+..|+... ..+||+||+.+.
T Consensus 18 ~~~~C~IC~~~~~~---p-~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecw_A 18 EEVTCPICLELLKE---P-VSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYP 70 (85)
T ss_dssp TTTSCTTTCSCCSS---C-EECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCC
T ss_pred cCCCCcCCChhhCc---c-eeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCC
Confidence 35679999998532 3 368999999999999999852 679999999886
No 40
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=98.93 E-value=4.4e-10 Score=85.13 Aligned_cols=49 Identities=29% Similarity=0.675 Sum_probs=40.8
Q ss_pred CCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
.+..||||++.+. +++..++|||.||..|+.+|+.. +.+||+||+.+..
T Consensus 14 ~~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~~-~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 14 PHLMCVLCGGYFI---DATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHK 62 (108)
T ss_dssp GGTBCTTTSSBCS---SEEEETTTCCEEEHHHHHHHHTS-CSBCTTTCCBSCS
T ss_pred CcCCCccCChHHh---CcCEeCCCCChhhHHHHHHHHHh-CCcCcCCCccccc
Confidence 3567999999854 35655699999999999999984 6899999999874
No 41
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=98.92 E-value=2.8e-10 Score=87.76 Aligned_cols=64 Identities=20% Similarity=0.401 Sum_probs=47.3
Q ss_pred CCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccchhH-HHHHHHHHHHhCC
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDMSR-TWKRIDEEVSLFN 217 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~dm~~-~~~~lD~~i~~~p 217 (221)
+..||||++.+.+ + +.++|||+|+..|+.+|+.....+||+||+.+..... .-..+.++|.+.+
T Consensus 18 ~~~C~IC~~~~~~---p-~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~l~~~i~~l~ 82 (118)
T 3hct_A 18 KYECPICLMALRE---A-VQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFAKREILSLM 82 (118)
T ss_dssp GGBCTTTCSBCSS---E-EECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEECHHHHHHHHTSE
T ss_pred CCCCCcCChhhcC---e-EECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCHHhcccCHHHHHHHccce
Confidence 4579999988542 3 4579999999999999998655699999999875321 2244566666554
No 42
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=98.92 E-value=4.5e-10 Score=82.39 Aligned_cols=48 Identities=27% Similarity=0.663 Sum_probs=38.5
Q ss_pred CCCCCccchhhcccCCCceeeec-cCCccCHHHHHHHHhc-CcCCCCCCccccc
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMK-CGHTMHCECYHEMIKR-DKYCCPICSKSVI 200 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~-CGH~~H~~C~~~~l~~-~~~~CPiCrksi~ 200 (221)
.+..||||++.|.+ + +.|+ |||+|+..|+.+|+.. ...+||+||+.+.
T Consensus 12 ~~~~C~IC~~~~~~---p-~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 61 (92)
T 3ztg_A 12 DELLCLICKDIMTD---A-VVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDV 61 (92)
T ss_dssp TTTEETTTTEECSS---C-EECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSSC
T ss_pred cCCCCCCCChhhcC---c-eECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcCC
Confidence 35679999997542 3 4678 9999999999999964 3479999999973
No 43
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=98.91 E-value=1.6e-10 Score=82.12 Aligned_cols=47 Identities=34% Similarity=0.753 Sum_probs=38.8
Q ss_pred CCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcC------cCCCCCCccccc
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRD------KYCCPICSKSVI 200 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~------~~~CPiCrksi~ 200 (221)
+..||||++.+.+ + +.|+|||.|+..|+.+|+... ..+||+||+.+.
T Consensus 12 ~~~C~IC~~~~~~---p-~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~ 64 (79)
T 2egp_A 12 EVTCPICLELLTE---P-LSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYS 64 (79)
T ss_dssp CCEETTTTEECSS---C-CCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCC
T ss_pred CCCCcCCCcccCC---e-eECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCC
Confidence 5679999998532 3 358999999999999999742 679999999986
No 44
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.89 E-value=7.6e-10 Score=79.01 Aligned_cols=48 Identities=31% Similarity=0.725 Sum_probs=39.6
Q ss_pred CCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhc-----CcCCCCCCccccc
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKR-----DKYCCPICSKSVI 200 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~-----~~~~CPiCrksi~ 200 (221)
....||||++.+.+ ...|+|||.|+..|+.+|+.. ...+||+||+.+.
T Consensus 18 ~~~~C~IC~~~~~~----p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecv_A 18 EEVTCPICLELLTQ----PLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQ 70 (85)
T ss_dssp CCCCCTTTCSCCSS----CBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSC
T ss_pred CCCCCCCCCcccCC----ceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccC
Confidence 35689999998532 345799999999999999974 2689999999886
No 45
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=98.88 E-value=2.4e-10 Score=87.39 Aligned_cols=48 Identities=29% Similarity=0.887 Sum_probs=40.0
Q ss_pred CCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
+..||||++.+.+ .+.|+|||+|+..|+..|+..++.+||+||+.+..
T Consensus 15 ~~~C~iC~~~~~~----p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 15 ECQCGICMEILVE----PVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSS 62 (115)
T ss_dssp HHBCTTTCSBCSS----CEECTTSCEECHHHHCCCCCTTTSBCTTTCCBCHH
T ss_pred CCCCccCCcccCc----eeEcCCCCHHhHHHHHHHHhHCcCCCCCCCcccCc
Confidence 4579999998643 34579999999999999997667899999999863
No 46
>2k2d_A Ring finger and CHY zinc finger domain- containing protein 1; zinc-binding protein, cytoplasm, metal-binding, nucleus, metal binding protein; NMR {Homo sapiens}
Probab=98.85 E-value=2.7e-10 Score=83.94 Aligned_cols=29 Identities=28% Similarity=0.522 Sum_probs=0.0
Q ss_pred CCCCcccccchhHHHHHHHHHHHhCCCCC
Q 027589 192 CPICSKSVIDMSRTWKRIDEEVSLFNLSF 220 (221)
Q Consensus 192 CPiCrksi~dm~~~~~~lD~~i~~~pmP~ 220 (221)
||+|+||+.||+.+|++||++||++|||+
T Consensus 1 ~~~c~ks~~dm~~~~~~lD~~ia~~pmP~ 29 (79)
T 2k2d_A 1 GSHMMHSALDMTRYWRQLDDEVAQTPMPS 29 (79)
T ss_dssp -----------------------------
T ss_pred CCcccccHHHHHHHHHHHHHHHHhCCCCH
Confidence 79999999999999999999999999996
No 47
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.82 E-value=6e-09 Score=78.53 Aligned_cols=47 Identities=26% Similarity=0.705 Sum_probs=37.8
Q ss_pred CCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcC--cCCCCCCccccc
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRD--KYCCPICSKSVI 200 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~--~~~CPiCrksi~ 200 (221)
...||||++.+.+ + ..++|||.|+..|+..|+... ..+||+||+.+.
T Consensus 21 ~~~C~IC~~~~~~---p-~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 69 (112)
T 1jm7_A 21 ILECPICLELIKE---P-VSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDIT 69 (112)
T ss_dssp HTSCSSSCCCCSS---C-CBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCC
T ss_pred CCCCcccChhhcC---e-EECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCC
Confidence 4579999997532 3 348999999999999999842 258999999876
No 48
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=98.78 E-value=2.7e-09 Score=86.25 Aligned_cols=48 Identities=21% Similarity=0.622 Sum_probs=39.9
Q ss_pred CCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
+..||||++.+.+ ++ +|+|||+|+..|+..|+.....+||+||+.+..
T Consensus 78 ~~~C~IC~~~~~~---pv-~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 125 (150)
T 1z6u_A 78 SFMCVCCQELVYQ---PV-TTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQ 125 (150)
T ss_dssp HTBCTTTSSBCSS---EE-ECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred CCEeecCChhhcC---CE-EcCCCCchhHHHHHHHHHhCCCcCCCCCccCCC
Confidence 4579999997532 34 489999999999999998656799999999873
No 49
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=98.69 E-value=2.7e-09 Score=74.27 Aligned_cols=51 Identities=24% Similarity=0.557 Sum_probs=40.1
Q ss_pred CCCCCCccchhhcccCCCceeee--ccCCc-cCHHHHHHHHhcCcCCCCCCcccccchh
Q 027589 148 SMHHHCPICYEYLFDSLRNTTVM--KCGHT-MHCECYHEMIKRDKYCCPICSKSVIDMS 203 (221)
Q Consensus 148 ~~~~~CpICle~lf~s~~~v~~L--~CGH~-~H~~C~~~~l~~~~~~CPiCrksi~dm~ 203 (221)
.....|+||++...+ ..++ ||||. |-..|+..|.+. +.+||+||+.|.+.-
T Consensus 5 ~~~~~C~IC~~~~~~----~~~~~~pCgH~~~C~~C~~~~~~~-~~~CPiCR~~i~~~i 58 (63)
T 2vje_B 5 NLLKPCSLCEKRPRD----GNIIHGRTGHLVTCFHCARRLKKA-GASCPICKKEIQLVI 58 (63)
T ss_dssp GGGSBCTTTSSSBSC----EEEEETTEEEEEECHHHHHHHHHT-TCBCTTTCCBCCEEE
T ss_pred CcCCCCcccCCcCCC----eEEEecCCCCHhHHHHHHHHHHHh-CCcCCCcCchhhceE
Confidence 345689999997432 3344 99998 999999999874 679999999987643
No 50
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=98.67 E-value=4.4e-09 Score=73.36 Aligned_cols=51 Identities=24% Similarity=0.484 Sum_probs=40.7
Q ss_pred CCCCCCCccchhhcccCCCceeee--ccCCc-cCHHHHHHHHhcCcCCCCCCcccccch
Q 027589 147 NSMHHHCPICYEYLFDSLRNTTVM--KCGHT-MHCECYHEMIKRDKYCCPICSKSVIDM 202 (221)
Q Consensus 147 ~~~~~~CpICle~lf~s~~~v~~L--~CGH~-~H~~C~~~~l~~~~~~CPiCrksi~dm 202 (221)
...+..|+||++... .+.++ ||||. |-..|+..|+. .+.+||+||+.|.+.
T Consensus 5 ~~~~~~C~IC~~~~~----~~~~~~~pCgH~~~C~~C~~~~~~-~~~~CPiCR~~i~~~ 58 (64)
T 2vje_A 5 LNAIEPCVICQGRPK----NGCIVHGKTGHLMACFTCAKKLKK-RNKPCPVCRQPIQMI 58 (64)
T ss_dssp CGGGSCCTTTSSSCS----CEEEEETTEEEEEECHHHHHHHHH-TTCCCTTTCCCCCEE
T ss_pred CCCcCCCCcCCCCCC----CEEEECCCCCChhhHHHHHHHHHH-cCCcCCCcCcchhce
Confidence 445678999999732 23444 99999 78999999997 467999999998754
No 51
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=98.61 E-value=4.2e-09 Score=84.39 Aligned_cols=47 Identities=19% Similarity=0.446 Sum_probs=38.7
Q ss_pred CCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccc
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSV 199 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi 199 (221)
.+..||||++.|.+ + +.++|||.|++.||.+|+.....+||+||+.+
T Consensus 30 ~~~~C~IC~~~~~~---p-v~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~ 76 (141)
T 3knv_A 30 AKYLCSACRNVLRR---P-FQAQCGHRYCSFCLASILSSGPQNCAACVHEG 76 (141)
T ss_dssp GGGBCTTTCSBCSS---E-EECTTSCEEEHHHHHHHGGGSCEECHHHHHTT
T ss_pred cCcCCCCCChhhcC---c-EECCCCCccCHHHHHHHHhcCCCCCCCCCCcc
Confidence 34579999998643 4 44799999999999999986567999999964
No 52
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=98.60 E-value=1.1e-08 Score=83.12 Aligned_cols=64 Identities=20% Similarity=0.401 Sum_probs=46.1
Q ss_pred CCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccchhH-HHHHHHHHHHhCC
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDMSR-TWKRIDEEVSLFN 217 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~dm~~-~~~~lD~~i~~~p 217 (221)
+..||||++.|.+ ++ .++|||+|.+.|+.+|+.....+||+||+.+..-.. .-..+.++|...+
T Consensus 18 ~~~C~IC~~~~~~---pv-~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~~~~~i~~l~ 82 (170)
T 3hcs_A 18 KYECPICLMALRE---AV-QTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFAKREILSLM 82 (170)
T ss_dssp GGBCTTTCSBCSS---EE-ECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEECHHHHHHHHTSE
T ss_pred CCCCCCCChhhcC---cE-ECCCCCHHHHHHHHHHHHhCCCCCCCCccCcchhhhhhhHHHHHHHhhcc
Confidence 4579999998543 44 489999999999999998655699999999874211 1133455555543
No 53
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.59 E-value=7e-09 Score=70.24 Aligned_cols=45 Identities=22% Similarity=0.450 Sum_probs=36.4
Q ss_pred CCCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 148 SMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 148 ~~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
..+..|+||++.+.+ .++|+|||+|+..|+..| ..+||+||+.+.
T Consensus 4 ~~~~~C~IC~~~~~~----p~~l~CgH~fC~~Ci~~~----~~~CP~Cr~~~~ 48 (56)
T 1bor_A 4 FQFLRCQQCQAEAKC----PKLLPCLHTLCSGCLEAS----GMQCPICQAPWP 48 (56)
T ss_dssp CCCSSCSSSCSSCBC----CSCSTTSCCSBTTTCSSS----SSSCSSCCSSSS
T ss_pred ccCCCceEeCCccCC----eEEcCCCCcccHHHHccC----CCCCCcCCcEee
Confidence 445679999998542 357899999999999773 579999999875
No 54
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=98.57 E-value=6.3e-09 Score=74.28 Aligned_cols=44 Identities=23% Similarity=0.582 Sum_probs=37.0
Q ss_pred CCCCccchhhcccCCCceeeeccCCc-cCHHHHHHHHhcCcCCCCCCcccccch
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCGHT-MHCECYHEMIKRDKYCCPICSKSVIDM 202 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CGH~-~H~~C~~~~l~~~~~~CPiCrksi~dm 202 (221)
+..|+||++.+. ....|||||. |...|+..| .+||+||+.+...
T Consensus 24 ~~~C~iC~~~~~----~~~~~pCgH~~~C~~C~~~~-----~~CP~Cr~~i~~~ 68 (74)
T 4ic3_A 24 EKLCKICMDRNI----AIVFVPCGHLVTCKQCAEAV-----DKCPMCYTVITFK 68 (74)
T ss_dssp HTBCTTTSSSBC----CEEEETTCCBCCCHHHHTTC-----SBCTTTCCBCSEE
T ss_pred CCCCCCCCCCCC----CEEEcCCCChhHHHHhhhcC-----ccCCCcCcCccCc
Confidence 467999999743 3567899999 999999887 6999999998754
No 55
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.52 E-value=5.9e-08 Score=70.41 Aligned_cols=48 Identities=25% Similarity=0.585 Sum_probs=38.1
Q ss_pred CCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcC-cCCCCCCccccc
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRD-KYCCPICSKSVI 200 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~-~~~CPiCrksi~ 200 (221)
..+|+||.+.+.. ..+-..|||.||..||..||++. +.+||+|+....
T Consensus 15 i~~C~IC~~~i~~---g~~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~ 63 (74)
T 2ct0_A 15 VKICNICHSLLIQ---GQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWP 63 (74)
T ss_dssp SCBCSSSCCBCSS---SEECSSSCCEECHHHHHHHSTTCSSCCCTTTCSCCC
T ss_pred CCcCcchhhHccc---CCccCCCCchhhHHHHHHHHHhcCCCCCCCCcCcCC
Confidence 4689999998643 23444899999999999999853 278999998764
No 56
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.52 E-value=1.5e-08 Score=77.87 Aligned_cols=45 Identities=22% Similarity=0.535 Sum_probs=37.0
Q ss_pred CCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
+..||||++.+. +++...+|||+|+..|+..|+. .+||+||+.+.
T Consensus 22 ~~~C~IC~~~~~---~pv~~~~CgH~fC~~Ci~~~~~---~~CP~Cr~~~~ 66 (117)
T 1jm7_B 22 LLRCSRCTNILR---EPVCLGGCEHIFCSNCVSDCIG---TGCPVCYTPAW 66 (117)
T ss_dssp TTSCSSSCSCCS---SCBCCCSSSCCBCTTTGGGGTT---TBCSSSCCBCS
T ss_pred CCCCCCCChHhh---CccEeCCCCCHHHHHHHHHHhc---CCCcCCCCcCc
Confidence 467999999853 2444449999999999999986 78999999885
No 57
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=98.51 E-value=6.3e-08 Score=89.73 Aligned_cols=49 Identities=24% Similarity=0.567 Sum_probs=41.2
Q ss_pred CCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
....|+||++.+. ..+.+||||.||..|+.+|+.....+||+||+.+..
T Consensus 331 ~~~~C~ICle~~~----~pv~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~ 379 (389)
T 2y1n_A 331 TFQLCKICAENDK----DVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKG 379 (389)
T ss_dssp SSSBCTTTSSSBC----CEEEETTCCEECHHHHHHHHHHTCSBCTTTCCBCCE
T ss_pred CCCCCCccCcCCC----CeEEeCCCChhhHHHHHHHHhcCCCCCCCCCCccCC
Confidence 3468999999852 356799999999999999998557899999998864
No 58
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.42 E-value=2.6e-07 Score=68.27 Aligned_cols=49 Identities=20% Similarity=0.484 Sum_probs=37.3
Q ss_pred CCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhc-------CcCCCCC--Cccc
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKR-------DKYCCPI--CSKS 198 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~-------~~~~CPi--Crks 198 (221)
....||||++++ .....+..++|||.|.+.|+.+|+.. ...+||. |+..
T Consensus 4 ~~~~C~IC~~~~-~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 4 GSSGCKLCLGEY-PVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp SBCCCSSSCCCC-BGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CCcCCcccCccc-ccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 356799999984 43233333479999999999999873 1368999 9998
No 59
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=98.39 E-value=1.6e-07 Score=65.12 Aligned_cols=51 Identities=25% Similarity=0.496 Sum_probs=38.8
Q ss_pred cCCCCCCCccchhhcccCCCceeeeccC--C---ccCHHHHHHHHhc-CcCCCCCCccccc
Q 027589 146 ENSMHHHCPICYEYLFDSLRNTTVMKCG--H---TMHCECYHEMIKR-DKYCCPICSKSVI 200 (221)
Q Consensus 146 e~~~~~~CpICle~lf~s~~~v~~L~CG--H---~~H~~C~~~~l~~-~~~~CPiCrksi~ 200 (221)
|......|.||+++. + ++. ++||. + .||..|+.+|+.. ++.+||+|+..+.
T Consensus 2 e~~~~~~CrIC~~~~-~--~~l-~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~ 58 (60)
T 1vyx_A 2 EDEDVPVCWICNEEL-G--NER-FRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp TTCSCCEETTTTEEC-S--CCC-CCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCCCEeEEeecCC-C--Cce-ecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeee
Confidence 455667899999872 2 233 68864 4 9999999999974 4689999998763
No 60
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=98.38 E-value=1.8e-07 Score=68.52 Aligned_cols=47 Identities=11% Similarity=0.105 Sum_probs=39.3
Q ss_pred CCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
.+..||||++.|.+ +| +++|||+|-+.||.+|+. .+.+||+|++.+.
T Consensus 13 ~~~~CpI~~~~m~d---PV-~~~cGhtf~r~~I~~~l~-~~~~cP~~~~~l~ 59 (85)
T 2kr4_A 13 DEFRDPLMDTLMTD---PV-RLPSGTVMDRSIILRHLL-NSPTDPFNRQMLT 59 (85)
T ss_dssp TTTBCTTTCSBCSS---EE-ECTTSCEEEHHHHHHHHH-HCSBCTTTCCBCC
T ss_pred hheECcccCchhcC---Ce-ECCCCCEECHHHHHHHHh-cCCCCCCCcCCCC
Confidence 35679999997532 44 578999999999999998 4789999999875
No 61
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.35 E-value=7.6e-08 Score=68.55 Aligned_cols=44 Identities=23% Similarity=0.557 Sum_probs=35.3
Q ss_pred CCCCccchhhcccCCCceeeeccCCc-cCHHHHHHHHhcCcCCCCCCcccccch
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCGHT-MHCECYHEMIKRDKYCCPICSKSVIDM 202 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CGH~-~H~~C~~~~l~~~~~~CPiCrksi~dm 202 (221)
+..|+||++.+. .+..|||||. |...|+.. ..+||+||+.+...
T Consensus 25 ~~~C~IC~~~~~----~~~~~pCgH~~~C~~C~~~-----~~~CP~Cr~~i~~~ 69 (75)
T 2ecg_A 25 EKLCKICMDRNI----AIVFVPCGHLVTCKQCAEA-----VDKCPMCYTVITFK 69 (75)
T ss_dssp HHSCSSSCSSCC----CBCCSSSCCCCBCHHHHHH-----CSBCTTTCCBCCCC
T ss_pred CCCCCcCCCCCC----CEEEecCCCHHHHHHHhhC-----CCCCccCCceecCc
Confidence 457999999742 3557899999 99999953 36899999998753
No 62
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=98.32 E-value=2.8e-07 Score=69.79 Aligned_cols=47 Identities=11% Similarity=0.121 Sum_probs=39.4
Q ss_pred CCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
.+..||||++.|.+ +| +++|||+|-+.||..|+. .+.+||+|+..+.
T Consensus 28 ~~~~CpI~~~~m~d---PV-~~~cGhtf~r~~I~~~l~-~~~~cP~~~~~l~ 74 (100)
T 2kre_A 28 DEFRDPLMDTLMTD---PV-RLPSGTIMDRSIILRHLL-NSPTDPFNRQTLT 74 (100)
T ss_dssp TTTBCTTTCSBCSS---EE-EETTTEEEEHHHHHHHTT-SCSBCSSSCCBCC
T ss_pred HhhCCcCccCcccC---Ce-ECCCCCEEchHHHHHHHH-cCCCCCCCCCCCC
Confidence 35679999997532 44 578999999999999998 5789999999886
No 63
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.31 E-value=1.4e-07 Score=66.68 Aligned_cols=49 Identities=22% Similarity=0.468 Sum_probs=39.0
Q ss_pred CCCCCCCccchhhcccCCCceeeeccCCc-cCHHHHHHHHhcCcCCCCCCcccccchhH
Q 027589 147 NSMHHHCPICYEYLFDSLRNTTVMKCGHT-MHCECYHEMIKRDKYCCPICSKSVIDMSR 204 (221)
Q Consensus 147 ~~~~~~CpICle~lf~s~~~v~~L~CGH~-~H~~C~~~~l~~~~~~CPiCrksi~dm~~ 204 (221)
...+..|+||++.. ..+..|||||. |...|+.. ..+||+||+.|.....
T Consensus 12 ~~~~~~C~IC~~~~----~~~v~~pCgH~~~C~~C~~~-----~~~CP~CR~~i~~~~~ 61 (68)
T 2ea5_A 12 EENSKDCVVCQNGT----VNWVLLPCRHTCLCDGCVKY-----FQQCPMCRQFVQESFA 61 (68)
T ss_dssp CCCSSCCSSSSSSC----CCCEETTTTBCCSCTTHHHH-----CSSCTTTCCCCCCEEC
T ss_pred CCCCCCCCCcCcCC----CCEEEECCCChhhhHHHHhc-----CCCCCCCCcchhceEE
Confidence 34467899999873 35778999999 99999973 3699999999986543
No 64
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=98.27 E-value=4.6e-07 Score=68.34 Aligned_cols=47 Identities=13% Similarity=0.103 Sum_probs=39.4
Q ss_pred CCCCCccchhhcccCCCceeeeccC-CccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMKCG-HTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~CG-H~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
.+..||||++.|.+ +| +++|| |+|-+.||.+|+.. +.+||+|++.+.
T Consensus 21 ~~~~CpI~~~~m~d---PV-~~~cG~htf~r~cI~~~l~~-~~~cP~~~~~l~ 68 (98)
T 1wgm_A 21 DEFLDPIMSTLMCD---PV-VLPSSRVTVDRSTIARHLLS-DQTDPFNRSPLT 68 (98)
T ss_dssp TTTBCTTTCSBCSS---EE-ECTTTCCEEEHHHHHHHTTT-SCBCTTTCSBCC
T ss_pred HhcCCcCccccccC---Ce-ECCCCCeEECHHHHHHHHHh-CCCCCCCCCCCC
Confidence 35679999997532 44 58999 99999999999984 789999999886
No 65
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=98.22 E-value=3.1e-07 Score=84.27 Aligned_cols=53 Identities=26% Similarity=0.530 Sum_probs=39.9
Q ss_pred CCCCCCccchhhcccCCC-ce---eeeccCCccCHHHHHHHHhcCc----------CCCCCCccccc
Q 027589 148 SMHHHCPICYEYLFDSLR-NT---TVMKCGHTMHCECYHEMIKRDK----------YCCPICSKSVI 200 (221)
Q Consensus 148 ~~~~~CpICle~lf~s~~-~v---~~L~CGH~~H~~C~~~~l~~~~----------~~CPiCrksi~ 200 (221)
....+|+||++.+.++.+ +. ..++|||.||..|+.+|+++.. .+||.||+.|.
T Consensus 306 e~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs 372 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLS 372 (381)
T ss_dssp CSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEE
T ss_pred cCCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCC
Confidence 346789999999665222 11 1358999999999999998522 57999999886
No 66
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.21 E-value=7.8e-07 Score=66.11 Aligned_cols=47 Identities=32% Similarity=0.605 Sum_probs=36.5
Q ss_pred CCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcC-----cCCCCC--Cccc
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRD-----KYCCPI--CSKS 198 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~-----~~~CPi--Crks 198 (221)
.+..||||++.| . ++|+...|||+|-+.||.+|+... ..+||+ |++.
T Consensus 6 ~~~~CPI~~~~~-~--dPV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 6 SGFTCPITKEEM-K--KPVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHT 59 (94)
T ss_dssp SCCBCTTTCSBC-S--SEEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCC
T ss_pred cEeECcCcCchh-c--CCEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCccc
Confidence 356799999874 3 355533599999999999999853 369999 9865
No 67
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.19 E-value=7.5e-07 Score=75.98 Aligned_cols=70 Identities=14% Similarity=0.068 Sum_probs=49.2
Q ss_pred cCCCCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccch-----hHHHHHHHHHHHhCCCC
Q 027589 146 ENSMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDM-----SRTWKRIDEEVSLFNLS 219 (221)
Q Consensus 146 e~~~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~dm-----~~~~~~lD~~i~~~pmP 219 (221)
+....-.||||++.|. +|| ++||||+|-+.||..|+..+..+||+|+.++..- ...=+.+++-++..+++
T Consensus 204 ~~~~~~~c~i~~~~~~---dPv-~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~~~l~~n~~l~~~i~~~~~~~~~~ 278 (281)
T 2c2l_A 204 DIPDYLCGKISFELMR---EPC-ITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQLIPNLAMKEVIDAFISENGWV 278 (281)
T ss_dssp CCCSTTBCTTTCSBCS---SEE-ECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGGGCEECHHHHHHHHHHHTTCSCS
T ss_pred CCCcccCCcCcCCHhc---CCe-ECCCCCEECHHHHHHHHHHCCCCCcCCCCCCchhcCcccHHHHHHHHHHHHHCCCC
Confidence 3445678999999753 244 5889999999999999986556699999998621 11234455555555544
No 68
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=98.16 E-value=1.9e-07 Score=67.73 Aligned_cols=46 Identities=30% Similarity=0.661 Sum_probs=37.2
Q ss_pred CCCCccchhhcccCCCceeeeccCCc-cCHHHHHHHHhcCcCCCCCCcccccchhH
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCGHT-MHCECYHEMIKRDKYCCPICSKSVIDMSR 204 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CGH~-~H~~C~~~~l~~~~~~CPiCrksi~dm~~ 204 (221)
+..|+||++.+ ..+..|||||. |-..|+..| .+||+||+.+.....
T Consensus 18 ~~~C~IC~~~~----~~~v~~pCgH~~~C~~C~~~~-----~~CP~Cr~~i~~~~~ 64 (79)
T 2yho_A 18 AMLCMVCCEEE----INSTFCPCGHTVCCESCAAQL-----QSCPVCRSRVEHVQH 64 (79)
T ss_dssp HTBCTTTSSSB----CCEEEETTCBCCBCHHHHTTC-----SBCTTTCCBCCEEEE
T ss_pred CCEeEEeCccc----CcEEEECCCCHHHHHHHHHhc-----CcCCCCCchhhCeEE
Confidence 45799999874 24678999999 999999765 399999999986533
No 69
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=97.85 E-value=5.2e-06 Score=73.40 Aligned_cols=50 Identities=22% Similarity=0.480 Sum_probs=41.2
Q ss_pred CCCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhc-CcCCCCC--Cccccc
Q 027589 148 SMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKR-DKYCCPI--CSKSVI 200 (221)
Q Consensus 148 ~~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~-~~~~CPi--Crksi~ 200 (221)
..+..||||++.| . +||+.+.|||.|-+.||.+|+.. ...+||+ |++.+.
T Consensus 179 ~~el~CPIcl~~f-~--DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~ 231 (267)
T 3htk_C 179 KIELTCPITCKPY-E--APLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVS 231 (267)
T ss_dssp BCCSBCTTTSSBC-S--SEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEEC
T ss_pred ceeeECcCccCcc-c--CCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCc
Confidence 3456799999985 3 58887899999999999999974 2468999 999775
No 70
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=97.81 E-value=8.7e-06 Score=68.02 Aligned_cols=48 Identities=15% Similarity=0.126 Sum_probs=38.9
Q ss_pred CCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
.+..||||++.|. +|| ++||||+|-+.||..|+..+..+||+|+..+.
T Consensus 105 ~~f~CPI~~elm~---DPV-~~~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~ 152 (179)
T 2f42_A 105 DYLCGKISFELMR---EPC-ITPSGITYDRKDIEEHLQRVGHFDPVTRSPLT 152 (179)
T ss_dssp GGGBCTTTCSBCS---SEE-ECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred HhhcccCccccCC---CCe-ECCCCCEECHHHHHHHHHhCCCCCCCCcCCCC
Confidence 4567999999754 245 46999999999999999854447999999875
No 71
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=97.71 E-value=7.3e-06 Score=74.64 Aligned_cols=44 Identities=25% Similarity=0.680 Sum_probs=36.7
Q ss_pred CCCCccchhhcccCCCceeeeccCCc-cCHHHHHHHHhcCcCCCCCCcccccch
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCGHT-MHCECYHEMIKRDKYCCPICSKSVIDM 202 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CGH~-~H~~C~~~~l~~~~~~CPiCrksi~dm 202 (221)
+..|+||++.+. ....|||||. |...|+..| .+||+||+.+...
T Consensus 295 ~~~C~IC~~~~~----~~v~lpCgH~~fC~~C~~~~-----~~CP~CR~~i~~~ 339 (345)
T 3t6p_A 295 ERTCKVCMDKEV----SVVFIPCGHLVVCQECAPSL-----RKCPICRGIIKGT 339 (345)
T ss_dssp TCBCTTTSSSBC----CEEEETTCCEEECTTTGGGC-----SBCTTTCCBCCEE
T ss_pred CCCCCccCCcCC----ceEEcCCCChhHhHHHHhcC-----CcCCCCCCCccCe
Confidence 467999999843 3567899999 999999877 5899999998754
No 72
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=97.51 E-value=4.3e-05 Score=52.84 Aligned_cols=48 Identities=17% Similarity=0.133 Sum_probs=38.5
Q ss_pred CCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
+...|||+++-|. ++|...++||+|=+.+|.+|++. +.+||+.++.+.
T Consensus 2 ~~~~CpIs~~~m~---dPV~~~~sG~~yer~~I~~~l~~-~~~cP~t~~~L~ 49 (61)
T 2bay_A 2 SHMLCAISGKVPR---RPVLSPKSRTIFEKSLLEQYVKD-TGNDPITNEPLS 49 (61)
T ss_dssp --CCCTTTCSCCS---SEEEETTTTEEEEHHHHHHHHHH-HSBCTTTCCBCC
T ss_pred CeEEecCCCCCCC---CCEEeCCCCcEEcHHHHHHHHHh-CCCCcCCcCCCC
Confidence 3457999999754 35554499999999999999984 678999999875
No 73
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=97.50 E-value=5.3e-05 Score=57.96 Aligned_cols=50 Identities=22% Similarity=0.440 Sum_probs=41.1
Q ss_pred CCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccchhH
Q 027589 152 HCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDMSR 204 (221)
Q Consensus 152 ~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~dm~~ 204 (221)
.|++|.-++. .-.+.+||+|+|-.+|+..|.+....+||+|+..|.+++.
T Consensus 3 fC~~C~~Pi~---iygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~rVe~ 52 (101)
T 3vk6_A 3 FCDKCGLPIK---VYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRIEQ 52 (101)
T ss_dssp BCTTTCSBCS---EEEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCSEEEE
T ss_pred ecCccCCCeE---EEeeeccccccHHHHHHHHHHhccCCCCcCcCCeeeeeEE
Confidence 4788877643 3567899999999999999987667899999999987653
No 74
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=95.96 E-value=0.0042 Score=53.59 Aligned_cols=47 Identities=26% Similarity=0.615 Sum_probs=35.2
Q ss_pred CCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcC-cCCCCCCcccc
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRD-KYCCPICSKSV 199 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~-~~~CPiCrksi 199 (221)
-..|.||.+-+.- .++--.|+|.||..|+..|+++. +.+||.|+...
T Consensus 180 i~~C~iC~~iv~~---g~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~~W 227 (238)
T 3nw0_A 180 VKICNICHSLLIQ---GQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYW 227 (238)
T ss_dssp CCBCTTTCSBCSS---CEECSSSCCEECHHHHHHHTTTCSSCBCTTTCCBC
T ss_pred CCcCcchhhHHhC---CcccCccChHHHHHHHHHHHHhCCCCCCCCCCCCC
Confidence 4568888886542 23333499999999999999753 46999999864
No 75
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=91.41 E-value=0.067 Score=40.47 Aligned_cols=44 Identities=20% Similarity=0.580 Sum_probs=35.4
Q ss_pred CCCCccchhhcccCCCceeeeccC-CccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCG-HTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CG-H~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
..+|-.|+-. +. ..+.|. |.+...|+..+|+ .+.+||||.+.+-
T Consensus 28 ~~nCKsCWf~-~k-----~LV~C~dHYLCl~CLtlmL~-~SdrCpIC~~pLP 72 (99)
T 2ko5_A 28 PQFCKSCWFE-NK-----GLVECNNHYLCLNCLTLLLS-VSNRCPICKMPLP 72 (99)
T ss_dssp CCCCCSSCSC-CS-----SEEECSSCEEEHHHHHHTCS-SSSEETTTTEECC
T ss_pred cccChhhccc-cC-----CeeeecchhhHHHHHHHHHh-hccCCcccCCcCC
Confidence 4588889843 22 356896 9999999999998 5789999999885
No 76
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=91.20 E-value=0.055 Score=39.71 Aligned_cols=28 Identities=29% Similarity=0.701 Sum_probs=15.6
Q ss_pred ecCCCCccccccccCCCCCCCcceeeccccccc
Q 027589 67 ICSVCDTEQPVAQVCTNCGVNMGEYFCDICKFY 99 (221)
Q Consensus 67 ~C~~C~~~q~~~~~C~~Cg~~f~~y~C~~C~l~ 99 (221)
+|..|+.++.+ |..||+. .|||+.|+=.
T Consensus 33 fCPeCgq~Le~---lkACGA~--~yFC~~C~~L 60 (81)
T 2jrp_A 33 LCPDCRQPLQV---LKACGAV--DYFCQNGHGL 60 (81)
T ss_dssp ECSSSCSCCCE---EEETTEE--EECCTTTTCC
T ss_pred cCcchhhHHHH---HHhcCCc--CeeeccCCCE
Confidence 45555544333 4455544 7888888633
No 77
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=90.71 E-value=0.21 Score=40.09 Aligned_cols=67 Identities=15% Similarity=0.382 Sum_probs=44.5
Q ss_pred ecCCCCCCCccchhhcccCCCceeeeccCCccCHHHHHHHH----------hcCcCCCCCCccccc-c----hhHHHHHH
Q 027589 145 IENSMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMI----------KRDKYCCPICSKSVI-D----MSRTWKRI 209 (221)
Q Consensus 145 ~e~~~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l----------~~~~~~CPiCrksi~-d----m~~~~~~l 209 (221)
.+...+..|.||.+. .+-+--=.|--+||..|+..-+ ......||+|+..-+ . ...+++.|
T Consensus 58 d~Dg~~d~C~vC~~G----G~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~pl~~l~~~c~~~~~~~ 133 (142)
T 2lbm_A 58 DSDGMDEQCRWCAEG----GNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVTACNSVFENL 133 (142)
T ss_dssp CTTSCBCSCSSSCCC----SSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCCTTHHHHHHHHHHHHHH
T ss_pred cCCCCCCeecccCCC----CcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCccHHHHHHHHHHHHHHH
Confidence 456778889999974 2211112688999999999654 235788999995432 2 34466777
Q ss_pred HHHHHh
Q 027589 210 DEEVSL 215 (221)
Q Consensus 210 D~~i~~ 215 (221)
|+.+++
T Consensus 134 ~~~~~~ 139 (142)
T 2lbm_A 134 EQLLQQ 139 (142)
T ss_dssp HHHHTC
T ss_pred HHHHhc
Confidence 775543
No 78
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=89.69 E-value=0.2 Score=36.50 Aligned_cols=34 Identities=15% Similarity=0.322 Sum_probs=25.6
Q ss_pred CCCCCccchhhcccCCCceee-eccCCccCHHHHHHH
Q 027589 149 MHHHCPICYEYLFDSLRNTTV-MKCGHTMHCECYHEM 184 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~-L~CGH~~H~~C~~~~ 184 (221)
.+..|+||+++++. .++.. |.|||.|-..|+..+
T Consensus 2 ee~~C~~C~~~~~~--~av~~C~~C~~~~C~~Cl~~~ 36 (101)
T 2jun_A 2 EKVLCQFCDQDPAQ--DAVKTCVTCEVSYCDECLKAT 36 (101)
T ss_dssp CCCBCTTCCSSSCC--BCCEEETTTTEEECHHHHHHH
T ss_pred CCCCCcCCCCCCCC--CceEECCcCChHHhHHHCHHH
Confidence 34679999986443 23433 999999999999983
No 79
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=85.01 E-value=0.15 Score=38.40 Aligned_cols=84 Identities=21% Similarity=0.601 Sum_probs=44.2
Q ss_pred CCCcceeCCc-cceeecCccCc-----ccccccc----CcceeecCCCCCCCccchhhcccCCCceeeeccCCccCHHHH
Q 027589 112 DCGICRIGGR-ENYFHCKRCGS-----CYSTSLR----NNHLCIENSMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECY 181 (221)
Q Consensus 112 ~CgiCR~G~~-~~~fHC~~C~~-----C~s~~~~----~~H~C~e~~~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~ 181 (221)
.|.||..+|. ++...|+.|+. |+.+.+. +.=.|.+= ..|.||... .+...-+.--.|.-.||..|+
T Consensus 9 ~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C---~~C~~C~~~-~~~~~ll~Cd~C~~~yH~~Cl 84 (111)
T 2ysm_A 9 NCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPEC---KVCQNCKQS-GEDSKMLVCDTCDKGYHTFCL 84 (111)
T ss_dssp CBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTT---CCCTTTCCC-SCCTTEEECSSSCCEEEGGGS
T ss_pred CCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcC---CcccccCcc-CCCCCeeECCCCCcHHhHHhc
Confidence 4556655553 45667777764 3443321 11111110 146677764 111111222268899999999
Q ss_pred HHHHhc---CcCCCCCCcccc
Q 027589 182 HEMIKR---DKYCCPICSKSV 199 (221)
Q Consensus 182 ~~~l~~---~~~~CPiCrksi 199 (221)
+.-|.. ....||.|....
T Consensus 85 ~ppl~~~P~g~W~C~~C~~c~ 105 (111)
T 2ysm_A 85 QPVMKSVPTNGWKCKNCRICI 105 (111)
T ss_dssp SSCCSSCCSSCCCCHHHHCCS
T ss_pred CCccccCCCCCcCCcCCcCcC
Confidence 854432 467788886543
No 80
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=82.70 E-value=0.24 Score=37.51 Aligned_cols=75 Identities=25% Similarity=0.518 Sum_probs=41.7
Q ss_pred CccceeecCccCcccccc-c-----------cCcceeecCCCCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhc
Q 027589 120 GRENYFHCKRCGSCYSTS-L-----------RNNHLCIENSMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKR 187 (221)
Q Consensus 120 ~~~~~fHC~~C~~C~s~~-~-----------~~~H~C~e~~~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~ 187 (221)
.+++...|..|+.-+-.+ | ..+=.|.+= ..|.||.+.-.+..+-+.--.|...||..|++.-|..
T Consensus 22 ~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C---~~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~ 98 (112)
T 3v43_A 22 KPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIEC---KTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTR 98 (112)
T ss_dssp CCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTT---CCBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSS
T ss_pred CchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccC---CccccccCcCCCccceEEcCCCCCeeecccCCCCCCC
Confidence 456778888886554322 1 112222221 1577887641111111111258899999999765442
Q ss_pred ---CcCCCCCCcc
Q 027589 188 ---DKYCCPICSK 197 (221)
Q Consensus 188 ---~~~~CPiCrk 197 (221)
....||.|+.
T Consensus 99 ~P~~~W~C~~C~~ 111 (112)
T 3v43_A 99 MPKGMWICQICRP 111 (112)
T ss_dssp CCSSCCCCTTTSC
T ss_pred CCCCCeECCCCCC
Confidence 4678999975
No 81
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=80.34 E-value=1 Score=34.05 Aligned_cols=9 Identities=22% Similarity=0.748 Sum_probs=3.8
Q ss_pred eecCCCCcc
Q 027589 66 VICSVCDTE 74 (221)
Q Consensus 66 v~C~~C~~~ 74 (221)
.+|..|+.+
T Consensus 33 ~~CP~Cq~e 41 (101)
T 2jne_A 33 LHCPQCQHV 41 (101)
T ss_dssp CBCSSSCSB
T ss_pred ccCccCCCc
Confidence 344444443
No 82
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=76.64 E-value=0.12 Score=39.36 Aligned_cols=86 Identities=21% Similarity=0.508 Sum_probs=47.8
Q ss_pred CCCcceeCC--------ccceeecCccCcc-----ccccc-------cCcceeecCCCCCCCccchhhcccCCCceeeec
Q 027589 112 DCGICRIGG--------RENYFHCKRCGSC-----YSTSL-------RNNHLCIENSMHHHCPICYEYLFDSLRNTTVMK 171 (221)
Q Consensus 112 ~CgiCR~G~--------~~~~fHC~~C~~C-----~s~~~-------~~~H~C~e~~~~~~CpICle~lf~s~~~v~~L~ 171 (221)
.|+||..|+ +++...|+.|+.- +...+ ...=.|.+= ..|.||...- +..+-+.=-.
T Consensus 3 ~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C---~~C~~C~~~~-~~~~ll~Cd~ 78 (114)
T 2kwj_A 3 YCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIEC---KSCILCGTSE-NDDQLLFCDD 78 (114)
T ss_dssp CCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGG---CCCTTTTCCT-TTTTEEECSS
T ss_pred cCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCcccc---CccCcccccC-CCCceEEcCC
Confidence 455665443 4678888888754 44321 112223221 1578887642 1111111226
Q ss_pred cCCccCHHHHHHHHhc---CcCCCCCCcccccc
Q 027589 172 CGHTMHCECYHEMIKR---DKYCCPICSKSVID 201 (221)
Q Consensus 172 CGH~~H~~C~~~~l~~---~~~~CPiCrksi~d 201 (221)
|.-.||..|+..=|.. ....||.|...+.+
T Consensus 79 C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~~~~ 111 (114)
T 2kwj_A 79 CDRGYHMYCLNPPVAEPPEGSWSCHLCWELLKE 111 (114)
T ss_dssp SCCEEETTTSSSCCSSCCSSCCCCHHHHHHHHH
T ss_pred CCccccccccCCCccCCCCCCeECccccchhhc
Confidence 8899999999853332 36779988765543
No 83
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=73.08 E-value=3.5 Score=30.63 Aligned_cols=69 Identities=25% Similarity=0.701 Sum_probs=34.4
Q ss_pred ceeecCCCCcccccc--ccCCCCCCCcceeecccccccc-CCCCcCeeeCCCCC---cceeCC-ccceeecCccCccccc
Q 027589 64 KQVICSVCDTEQPVA--QVCTNCGVNMGEYFCDICKFYD-DDIEKGQFHCDDCG---ICRIGG-RENYFHCKRCGSCYST 136 (221)
Q Consensus 64 ~~v~C~~C~~~q~~~--~~C~~Cg~~f~~y~C~~C~l~d-d~~~k~~yHC~~Cg---iCR~G~-~~~~fHC~~C~~C~s~ 136 (221)
...+|..|+...... ..|..|+..|=. .|--.. ....+..+.|+.|. +|+.++ .+....|+.|+.-|-.
T Consensus 6 ~~~~C~~C~~~g~~~~ll~C~~C~~~~H~----~Cl~~~~~~~~~~~W~C~~C~~C~~C~~~~~~~~ll~Cd~C~~~yH~ 81 (111)
T 2ysm_A 6 SGANCAVCDSPGDLLDQFFCTTCGQHYHG----MCLDIAVTPLKRAGWQCPECKVCQNCKQSGEDSKMLVCDTCDKGYHT 81 (111)
T ss_dssp CCSCBTTTCCCCCTTTSEECSSSCCEECT----TTTTCCCCTTTSTTCCCTTTCCCTTTCCCSCCTTEEECSSSCCEEEG
T ss_pred CCCCCcCCCCCCCCcCCeECCCCCCCcCh----HHhCCccccccccCccCCcCCcccccCccCCCCCeeECCCCCcHHhH
Confidence 455666665543221 356666554321 121111 11123456666654 455444 2458889988865444
No 84
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=73.08 E-value=5.6 Score=29.64 Aligned_cols=56 Identities=20% Similarity=0.433 Sum_probs=41.7
Q ss_pred ecCCCCCCCccchhhcccCCCcee---eeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 145 IENSMHHHCPICYEYLFDSLRNTT---VMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 145 ~e~~~~~~CpICle~lf~s~~~v~---~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
+.....+.|.||.+++-...+.-. -.-|+=.+.+.|++--.+..+..||-|+...-
T Consensus 11 ~~~~~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrYk 69 (93)
T 1weo_A 11 LKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYK 69 (93)
T ss_dssp CSCCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCC
T ss_pred ccccCCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhccCccccccCCccc
Confidence 344455789999999644333322 23589999999999999888999999997664
No 85
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=71.00 E-value=0.56 Score=35.24 Aligned_cols=27 Identities=22% Similarity=0.560 Sum_probs=19.3
Q ss_pred ccCCccCHHHHHHHHhc-------CcCCCCCCcc
Q 027589 171 KCGHTMHCECYHEMIKR-------DKYCCPICSK 197 (221)
Q Consensus 171 ~CGH~~H~~C~~~~l~~-------~~~~CPiCrk 197 (221)
-|...+|..|....... ..+.||.|+.
T Consensus 80 ~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~ 113 (117)
T 4bbq_A 80 ICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQ 113 (117)
T ss_dssp TTCCEECGGGCCSCCCCEECSSSSSEEECTTTC-
T ss_pred ecCCeEECCCCCCCccccccccCCCCeECCCCcC
Confidence 58999999998653210 2488999985
No 86
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=67.84 E-value=3.2 Score=28.63 Aligned_cols=46 Identities=17% Similarity=0.369 Sum_probs=31.6
Q ss_pred CCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhc---CcCCCCCCccc
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKR---DKYCCPICSKS 198 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~---~~~~CPiCrks 198 (221)
....|.||.+. .+-+.=-.|...||..|++..|.. ....||.|+..
T Consensus 11 ~~~~C~vC~~~----~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 11 PGARCGVCGDG----TDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGD 59 (66)
T ss_dssp TTCCCTTTSCC----TTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTC
T ss_pred CCCCcCCCCCC----CeEEECCCCCCceecccCCCccCcCCCCCEECccccCC
Confidence 34569999753 222222268899999999877653 46789999753
No 87
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=65.06 E-value=0.55 Score=31.75 Aligned_cols=51 Identities=22% Similarity=0.338 Sum_probs=32.9
Q ss_pred CCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHh----cCcCCCCCCcccc
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIK----RDKYCCPICSKSV 199 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~----~~~~~CPiCrksi 199 (221)
....||||.....+...-+.--.|.-.||..|+..-.. ...|.||.|+..-
T Consensus 5 e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~ 59 (64)
T 1we9_A 5 SSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKS 59 (64)
T ss_dssp SCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTT
T ss_pred CCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCcC
Confidence 34569999876433322233336889999999864322 1468999997643
No 88
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=64.64 E-value=6.2 Score=30.91 Aligned_cols=54 Identities=17% Similarity=0.358 Sum_probs=36.3
Q ss_pred eeecCCCCCCCccchhhcccCCCceeeeccCCccCHHHHHHHH----------hcCcCCCCCCccccc
Q 027589 143 LCIENSMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMI----------KRDKYCCPICSKSVI 200 (221)
Q Consensus 143 ~C~e~~~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l----------~~~~~~CPiCrksi~ 200 (221)
.-.+...+..|.||.+. .+-+--=.|-.+||..|+...+ ......|++|+-+-+
T Consensus 50 ~~d~Dg~~~~C~vC~dG----G~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~pl 113 (129)
T 3ql9_A 50 SRDSDGMDEQCRWCAEG----GNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPEPL 113 (129)
T ss_dssp CBCTTSCBSSCTTTCCC----SEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCGGG
T ss_pred ccCCCCCCCcCeecCCC----CeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCHHH
Confidence 33466778889999974 1111111578999999999652 235689999976544
No 89
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=64.00 E-value=4.2 Score=24.87 Aligned_cols=18 Identities=28% Similarity=0.665 Sum_probs=13.5
Q ss_pred cCCCCCCcccccchhHHH
Q 027589 189 KYCCPICSKSVIDMSRTW 206 (221)
Q Consensus 189 ~~~CPiCrksi~dm~~~~ 206 (221)
.+.||+|.+.+.+.+...
T Consensus 5 GFiCP~C~~~l~s~~~L~ 22 (34)
T 3mjh_B 5 GFICPQCMKSLGSADELF 22 (34)
T ss_dssp EEECTTTCCEESSHHHHH
T ss_pred ccCCcHHHHHcCCHHHHH
Confidence 478999999998765433
No 90
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=62.48 E-value=2.9 Score=34.50 Aligned_cols=51 Identities=24% Similarity=0.582 Sum_probs=33.0
Q ss_pred CCCccchhhcccCCCceeee---ccCCccCHHHHHH------HHh----cCcCCCCCCcccccc
Q 027589 151 HHCPICYEYLFDSLRNTTVM---KCGHTMHCECYHE------MIK----RDKYCCPICSKSVID 201 (221)
Q Consensus 151 ~~CpICle~lf~s~~~v~~L---~CGH~~H~~C~~~------~l~----~~~~~CPiCrksi~d 201 (221)
..||||.....++......+ .|...||..|... -+. ...|.||.|+..-..
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~~ 66 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHPA 66 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSSC
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCCH
Confidence 45999987643332122334 4789999999843 111 126999999987664
No 91
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=62.16 E-value=2.1 Score=25.18 Aligned_cols=30 Identities=17% Similarity=0.505 Sum_probs=18.3
Q ss_pred CCCCCccchhhcccCCCceeeeccCCccCHHHH
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECY 181 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~ 181 (221)
+...||.|....+.. +.+. .=|..+|+.||
T Consensus 2 m~~~C~~C~k~Vy~~-Ek~~--~~g~~~Hk~CF 31 (31)
T 1zfo_A 2 MNPNCARCGKIVYPT-EKVN--CLDKFWHKACF 31 (31)
T ss_dssp CCCBCSSSCSBCCGG-GCCC--SSSSCCCGGGC
T ss_pred CCCcCCccCCEEecc-eeEE--ECCeEecccCC
Confidence 345688888776543 2222 23778888775
No 92
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=59.97 E-value=1.8 Score=30.07 Aligned_cols=49 Identities=22% Similarity=0.451 Sum_probs=31.7
Q ss_pred CCCccchhhcccCCCceeeeccCCccCHHHHHHHHhc---CcCCCCCCccccc
Q 027589 151 HHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKR---DKYCCPICSKSVI 200 (221)
Q Consensus 151 ~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~---~~~~CPiCrksi~ 200 (221)
..|+||...- +...-+.-=.|.-.||..|+..-+.. ..+.||.|...+.
T Consensus 19 ~~C~~C~~~~-~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~ 70 (75)
T 2k16_A 19 WICPGCNKPD-DGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKIK 70 (75)
T ss_dssp ECBTTTTBCC-SSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHHC
T ss_pred cCCCCCCCCC-CCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCchh
Confidence 4599998752 21111111258899999999754432 4788999987654
No 93
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=59.42 E-value=3 Score=33.41 Aligned_cols=31 Identities=26% Similarity=0.734 Sum_probs=21.7
Q ss_pred ceeeccccccccCCCCcCeeeCCCCCcceeC
Q 027589 89 GEYFCDICKFYDDDIEKGQFHCDDCGICRIG 119 (221)
Q Consensus 89 ~~y~C~~C~l~dd~~~k~~yHC~~CgiCR~G 119 (221)
..|-|+.|.+=--...+.-|||+.||+|.--
T Consensus 97 ~~yHC~~CgiCR~G~~~~ffHC~~C~~C~s~ 127 (143)
T 2dkt_A 97 RQYHCESCGICRIGPKEDFFHCLKCNLCLTT 127 (143)
T ss_dssp SEEEETTTTEEEESCGGGEEEETTTTEEEEG
T ss_pred ceecCCCCCceeccCCcCcEECCcCCeeecc
Confidence 3466655555433457899999999999654
No 94
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=58.09 E-value=3.7 Score=27.87 Aligned_cols=41 Identities=20% Similarity=0.469 Sum_probs=27.5
Q ss_pred CCCCccchhhccc---CCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 150 HHHCPICYEYLFD---SLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 150 ~~~CpICle~lf~---s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
...|+-|.+.+.. ..+.+..+ |..+|..|| +|-.|+++|.+
T Consensus 15 ~~~C~~C~~~I~~~g~~~~~~~a~--~~~~H~~CF---------~C~~C~~~L~~ 58 (77)
T 2egq_A 15 AKKCAGCKNPITGFGKGSSVVAYE--GQSWHDYCF---------HCKKCSVNLAN 58 (77)
T ss_dssp CCCCSSSCCCCCCCSSCCCEEEET--TEEEETTTC---------BCSSSCCBCTT
T ss_pred CccCcccCCcccCCCCCceeEEEC--cceeCcccC---------EehhcCCCCCC
Confidence 4568888888764 22333333 778888765 67788888863
No 95
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=57.06 E-value=4.9 Score=27.12 Aligned_cols=43 Identities=16% Similarity=0.399 Sum_probs=27.2
Q ss_pred CCCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 148 SMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 148 ~~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
.....|+.|.+.+......+.. =|..+|..|| +|-.|+++|.+
T Consensus 9 ~~~~~C~~C~~~I~~~~~~~~a--~~~~~H~~CF---------~C~~C~~~L~~ 51 (77)
T 1g47_A 9 LASATCERCKGGFAPAEKIVNS--NGELYHEQCF---------VCAQCFQQFPE 51 (77)
T ss_dssp CCCCBCSSSCCBCCSTTTCEEE--TTEEECTTTC---------CCTTTCCCCGG
T ss_pred CCCCCchhcCCccCCCceEEEe--CccEeccccC---------eECCCCCCCCC
Confidence 3456788888886543222223 3778887765 56778877764
No 96
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=56.33 E-value=5.1 Score=25.60 Aligned_cols=46 Identities=17% Similarity=0.533 Sum_probs=28.1
Q ss_pred CCccchhhcccCCCceeeeccCCccCHHHHHHHHh---cCcCCCCCCccc
Q 027589 152 HCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIK---RDKYCCPICSKS 198 (221)
Q Consensus 152 ~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~---~~~~~CPiCrks 198 (221)
.|.||... -+..+-+.=-.|.-.||..|++.=+. .....||.|.+.
T Consensus 2 ~C~vC~~~-~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~~ 50 (51)
T 1f62_A 2 RCKVCRKK-GEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCS-SCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSCC
T ss_pred CCCCCCCC-CCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCcccc
Confidence 47777754 11111122226889999999965332 246789999764
No 97
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=55.95 E-value=5.9 Score=26.42 Aligned_cols=39 Identities=18% Similarity=0.467 Sum_probs=19.3
Q ss_pred CCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 151 HHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 151 ~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
..|+.|.+.+......+.. =|..+|..|| +|-.|++.|.
T Consensus 6 ~~C~~C~~~I~~~~~~~~a--~~~~~H~~CF---------~C~~C~~~L~ 44 (72)
T 1x61_A 6 SGCGGCGEDVVGDGAGVVA--LDRVFHVGCF---------VCSTCRAQLR 44 (72)
T ss_dssp CCCSSSCSCCCSSSCCEEC--SSSEECTTTC---------BCSSSCCBCT
T ss_pred CCCccCCCccCCCceEEEE--CCCeEcccCC---------cccccCCcCC
Confidence 3466666655432122222 2566666554 4555666653
No 98
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=54.87 E-value=9.1 Score=25.52 Aligned_cols=9 Identities=33% Similarity=1.073 Sum_probs=5.8
Q ss_pred cccCCCCCC
Q 027589 78 AQVCTNCGV 86 (221)
Q Consensus 78 ~~~C~~Cg~ 86 (221)
...||.||.
T Consensus 18 ~~fCPkCG~ 26 (55)
T 2k4x_A 18 HRFCPRCGP 26 (55)
T ss_dssp SCCCTTTTT
T ss_pred cccCcCCCC
Confidence 356777775
No 99
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=54.11 E-value=5.2 Score=26.87 Aligned_cols=49 Identities=22% Similarity=0.537 Sum_probs=32.7
Q ss_pred cCCCCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHh---cCcCCCCCCccc
Q 027589 146 ENSMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIK---RDKYCCPICSKS 198 (221)
Q Consensus 146 e~~~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~---~~~~~CPiCrks 198 (221)
+...+..|.||.+. .+-+.--.|--.||..|+..-+. .....||.|.+.
T Consensus 7 ~~~~~~~C~vC~~~----g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 7 ETDHQDYCEVCQQG----GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp SSCCCSSCTTTSCC----SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred cCCCCCCCccCCCC----CcEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 34456679999863 12222226788999999987432 257889999864
No 100
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=54.05 E-value=5.1 Score=27.43 Aligned_cols=41 Identities=20% Similarity=0.559 Sum_probs=23.3
Q ss_pred CCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
...|+.|.+.+......+.. =|..+|..|| +|-.|++.|.+
T Consensus 15 ~~~C~~C~~~I~~~~~~~~a--~~~~~H~~CF---------~C~~C~~~L~~ 55 (82)
T 1x63_A 15 SPKCKGCFKAIVAGDQNVEY--KGTVWHKDCF---------TCSNCKQVIGT 55 (82)
T ss_dssp SCBCSSSCCBCCSSSCEEEC--SSCEEETTTC---------CCSSSCCCCTT
T ss_pred CCcCccCCcccccCceEEEE--CccccccccC---------chhhCCCccCC
Confidence 34677777776532222222 2667776655 56667776653
No 101
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=50.02 E-value=3.9 Score=27.79 Aligned_cols=22 Identities=18% Similarity=0.119 Sum_probs=10.5
Q ss_pred CCccCH-HHHHHHHhcCcCCCCCCcc
Q 027589 173 GHTMHC-ECYHEMIKRDKYCCPICSK 197 (221)
Q Consensus 173 GH~~H~-~C~~~~l~~~~~~CPiCrk 197 (221)
|..+.. .|+.+.+ ..+|--|..
T Consensus 47 g~~yC~~~cy~~~f---~~~C~~C~~ 69 (76)
T 1iml_A 47 GKPYCNHPCYSAMF---GPKGFGRGG 69 (76)
T ss_dssp TEEEETTTHHHHHS---SCCCSSCCC
T ss_pred CeEeeCHHHHHHHh---CccCCCcCC
Confidence 445555 3555443 234555553
No 102
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=49.71 E-value=6 Score=23.17 Aligned_cols=16 Identities=38% Similarity=1.055 Sum_probs=13.5
Q ss_pred cCCCCCCcccccchhH
Q 027589 189 KYCCPICSKSVIDMSR 204 (221)
Q Consensus 189 ~~~CPiCrksi~dm~~ 204 (221)
+++||+|+..+-|+..
T Consensus 3 k~~CpvCk~q~Pd~kt 18 (28)
T 2jvx_A 3 DFCCPKCQYQAPDMDT 18 (28)
T ss_dssp CEECTTSSCEESSHHH
T ss_pred cccCccccccCcChHH
Confidence 5789999999988755
No 103
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=49.61 E-value=7.8 Score=28.14 Aligned_cols=15 Identities=27% Similarity=0.569 Sum_probs=8.8
Q ss_pred cceeecCccCcccccc
Q 027589 122 ENYFHCKRCGSCYSTS 137 (221)
Q Consensus 122 ~~~fHC~~C~~C~s~~ 137 (221)
++|| |..||.=+|++
T Consensus 50 ~~yF-C~~C~~LiSkk 64 (81)
T 2jrp_A 50 VDYF-CQNGHGLISKK 64 (81)
T ss_dssp EEEC-CTTTTCCCCTT
T ss_pred cCee-eccCCCEeecc
Confidence 3444 66666666654
No 104
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=49.45 E-value=9 Score=25.52 Aligned_cols=41 Identities=20% Similarity=0.434 Sum_probs=25.6
Q ss_pred CCCCccchhhccc--CCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 150 HHHCPICYEYLFD--SLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 150 ~~~CpICle~lf~--s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
...|+-|.+.+.. +...+ ..=|..+|..|| +|-.|+++|.+
T Consensus 5 ~~~C~~C~~~I~~~~~~~~~--~a~~~~wH~~CF---------~C~~C~~~L~~ 47 (72)
T 1x4l_A 5 SSGCAGCTNPISGLGGTKYI--SFEERQWHNDCF---------NCKKCSLSLVG 47 (72)
T ss_dssp SCSBTTTTBCCCCSSSCSCE--ECSSCEECTTTC---------BCSSSCCBCTT
T ss_pred CCCCcCCCccccCCCCcceE--EECCcccCcccC---------EeccCCCcCCC
Confidence 3468888887664 22222 224778887765 67778887753
No 105
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=49.35 E-value=5.5 Score=26.51 Aligned_cols=40 Identities=25% Similarity=0.563 Sum_probs=21.9
Q ss_pred CCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 151 HHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 151 ~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
..|+.|.+.+...... +..=|..+|..|| +|-.|+++|.+
T Consensus 6 ~~C~~C~~~I~~~~~~--~~a~~~~~H~~CF---------~C~~C~~~L~~ 45 (72)
T 1wyh_A 6 SGCSACGETVMPGSRK--LEYGGQTWHEHCF---------LCSGCEQPLGS 45 (72)
T ss_dssp CBCSSSCCBCCSSSCE--ECSTTCCEETTTC---------BCTTTCCBTTT
T ss_pred CCCccCCCccccCccE--EEECccccCcccC---------eECCCCCcCCC
Confidence 4577777765532121 2223667776654 56667766653
No 106
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=47.97 E-value=8.3 Score=25.22 Aligned_cols=9 Identities=33% Similarity=1.091 Sum_probs=6.3
Q ss_pred cccCCCCCC
Q 027589 78 AQVCTNCGV 86 (221)
Q Consensus 78 ~~~C~~Cg~ 86 (221)
-..||.||+
T Consensus 19 ~k~CP~CG~ 27 (50)
T 3j20_Y 19 NKFCPRCGP 27 (50)
T ss_dssp SEECSSSCS
T ss_pred cccCCCCCC
Confidence 356888877
No 107
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=47.04 E-value=14 Score=18.67 Aligned_cols=19 Identities=26% Similarity=0.415 Sum_probs=14.2
Q ss_pred cCCCCCCcccccchhHHHH
Q 027589 189 KYCCPICSKSVIDMSRTWK 207 (221)
Q Consensus 189 ~~~CPiCrksi~dm~~~~~ 207 (221)
.|.|++|.+++...+.+.+
T Consensus 2 ~~~C~~C~k~f~~~~~l~~ 20 (30)
T 1klr_A 2 TYQCQYCEFRSADSSNLKT 20 (30)
T ss_dssp CCCCSSSSCCCSCSHHHHH
T ss_pred CccCCCCCCccCCHHHHHH
Confidence 4789999999987655433
No 108
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=46.17 E-value=19 Score=26.57 Aligned_cols=44 Identities=18% Similarity=0.575 Sum_probs=30.9
Q ss_pred CCCCCCccchhhcccCCCceeeec---cCCccCHHHHHHH------------Hh---cCcCCCCCCc
Q 027589 148 SMHHHCPICYEYLFDSLRNTTVMK---CGHTMHCECYHEM------------IK---RDKYCCPICS 196 (221)
Q Consensus 148 ~~~~~CpICle~lf~s~~~v~~L~---CGH~~H~~C~~~~------------l~---~~~~~CPiCr 196 (221)
..+..|+||-- |++. ..+| ||=+||..|+.+. ++ ....+||-|.
T Consensus 13 ~~D~~C~VC~~--~t~~---~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Ce 74 (89)
T 1wil_A 13 VNDEMCDVCEV--WTAE---SLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCD 74 (89)
T ss_dssp CCSCCCTTTCC--CCSS---CCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTC
T ss_pred CCCcccCcccc--cccc---ceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccc
Confidence 45778999974 4432 2455 6999999999997 21 1357899994
No 109
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=44.65 E-value=7.4 Score=26.31 Aligned_cols=40 Identities=25% Similarity=0.593 Sum_probs=25.9
Q ss_pred CCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
...|+.|.+.+... +.+. .=|..+|..|| +|-.|+++|.+
T Consensus 9 ~~~C~~C~~~I~~~-~~v~--a~~~~~H~~CF---------~C~~C~~~L~~ 48 (76)
T 2cu8_A 9 ASKCPKCDKTVYFA-EKVS--SLGKDWHKFCL---------KCERCSKTLTP 48 (76)
T ss_dssp CCBCTTTCCBCCTT-TEEE--ETTEEEETTTC---------BCSSSCCBCCT
T ss_pred CCCCcCCCCEeECC-eEEE--ECCeEeeCCCC---------CCCCCCCccCC
Confidence 45688888876533 2333 33777887664 67788887764
No 110
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.95 E-value=10 Score=25.91 Aligned_cols=40 Identities=23% Similarity=0.524 Sum_probs=23.6
Q ss_pred CCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 151 HHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 151 ~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
..|+.|.+.+......+.. =|..+|..|| +|-.|+++|.+
T Consensus 16 ~~C~~C~~~I~~~~~~~~a--~~~~~H~~CF---------~C~~C~~~L~~ 55 (82)
T 2ehe_A 16 NTCAECQQLIGHDSRELFY--EDRHFHEGCF---------RCCRCQRSLAD 55 (82)
T ss_dssp CBCTTTCCBCCSSCCBCCC--SSCCCBTTTS---------BCTTTCCBCSS
T ss_pred CcCccCCCccccCcEEEEe--CCccccccCC---------eecCCCCccCC
Confidence 4678888776522121222 2677787664 56777777753
No 111
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=43.90 E-value=9.4 Score=25.29 Aligned_cols=40 Identities=20% Similarity=0.542 Sum_probs=21.3
Q ss_pred CCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 151 HHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 151 ~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
..|+.|.+.+......+.. =|..+|..|| +|-.|+++|.+
T Consensus 6 ~~C~~C~~~I~~~~~~~~a--~~~~~H~~CF---------~C~~C~~~L~~ 45 (72)
T 1x4k_A 6 SGCQECKKTIMPGTRKMEY--KGSSWHETCF---------ICHRCQQPIGT 45 (72)
T ss_dssp CCBSSSCCCCCSSSCEEEE--TTEEEETTTT---------CCSSSCCCCCS
T ss_pred CCCccCCCcccCCceEEEE--CcCeecccCC---------cccccCCccCC
Confidence 3577777665532122222 3566776554 46666666653
No 112
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=43.87 E-value=8.5 Score=26.68 Aligned_cols=42 Identities=24% Similarity=0.573 Sum_probs=27.8
Q ss_pred CCCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 148 SMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 148 ~~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
.....|+.|.+.+... +.+. .=|..+|..|| +|-.|+++|..
T Consensus 13 ~~~~~C~~C~~~I~~~-e~v~--a~~~~wH~~CF---------~C~~C~~~L~~ 54 (82)
T 2co8_A 13 GAGDLCALCGEHLYVL-ERLC--VNGHFFHRSCF---------RCHTCEATLWP 54 (82)
T ss_dssp CSSCBCSSSCCBCCTT-TBCC--BTTBCCBTTTC---------BCSSSCCBCCT
T ss_pred CCCCCCcccCCCcccc-eEEE--ECCCeeCCCcC---------EEcCCCCCcCC
Confidence 3456788888887543 2333 23778888775 67778887764
No 113
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=43.80 E-value=11 Score=25.55 Aligned_cols=39 Identities=23% Similarity=0.491 Sum_probs=25.4
Q ss_pred CCCccchhhccc--CCCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 151 HHCPICYEYLFD--SLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 151 ~~CpICle~lf~--s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
..|+.|.+.+.. ..+.+. .=|..+|..|| +|-.|+++|.
T Consensus 6 ~~C~~C~~~I~~~g~~~~~~--a~~~~wH~~CF---------~C~~C~~~L~ 46 (76)
T 1x68_A 6 SGCVACSKPISGLTGAKFIC--FQDSQWHSECF---------NCGKCSVSLV 46 (76)
T ss_dssp CCCTTTCCCCCTTTTCCEEE--ETTEEEEGGGC---------BCTTTCCBCS
T ss_pred CCCccCCCcccCCCCceeEE--ECCcccCcccC---------ChhhCCCcCC
Confidence 468888887664 222222 34678888765 6778888775
No 114
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=43.59 E-value=23 Score=26.31 Aligned_cols=26 Identities=27% Similarity=0.658 Sum_probs=18.4
Q ss_pred ccCCccCHHHHHH------HHhcCcCCCCCCc
Q 027589 171 KCGHTMHCECYHE------MIKRDKYCCPICS 196 (221)
Q Consensus 171 ~CGH~~H~~C~~~------~l~~~~~~CPiCr 196 (221)
.||..||..|+.. .+......||-|+
T Consensus 31 ~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 31 DCGNSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp TTCCEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred hcCCCCCCchhcCCHHHHHHhhccccccccCC
Confidence 6899999999952 2334566677764
No 115
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=42.98 E-value=12 Score=25.94 Aligned_cols=40 Identities=23% Similarity=0.531 Sum_probs=26.3
Q ss_pred CCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
....|+-|.+.+... +.+..+ |..+|..|| +|-.|++.|.
T Consensus 14 ~~~~C~~C~~~I~~~-~~v~a~--~~~wH~~CF---------~C~~C~~~L~ 53 (80)
T 2dj7_A 14 GPSHCAGCKEEIKHG-QSLLAL--DKQWHVSCF---------KCQTCSVILT 53 (80)
T ss_dssp SCSCCTTTCCCCSSS-CCEEET--TEEECTTTC---------BCSSSCCBCS
T ss_pred CCCCCcCcCCeeCCC-eEEEEC--CcccccccC---------CcCcCCCCcC
Confidence 345688888876543 334333 678887765 6777887775
No 116
>1x6a_A LIMK-2, LIM domain kinase 2; LIM-kinase 2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=42.94 E-value=9.7 Score=25.96 Aligned_cols=37 Identities=19% Similarity=0.412 Sum_probs=20.4
Q ss_pred CCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 151 HHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 151 ~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
..|+.|.+.+.+ +.+.. =|..+|..|| +|-.|++.|.
T Consensus 16 ~~C~~C~~~I~~--~~~~a--~~~~~H~~CF---------~C~~C~~~L~ 52 (81)
T 1x6a_A 16 EFCHGCSLLMTG--PFMVA--GEFKYHPECF---------ACMSCKVIIE 52 (81)
T ss_dssp CBCTTTCCBCCS--CCBCC--TTCCBCTTSC---------BCTTTCCBCC
T ss_pred CcCccCCCCcCc--eEEEE--CCceeccccC---------CccCCCCccC
Confidence 357777766552 22222 2666776554 5666776664
No 117
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=42.38 E-value=12 Score=24.59 Aligned_cols=9 Identities=22% Similarity=0.427 Sum_probs=4.7
Q ss_pred ecCCCCccc
Q 027589 67 ICSVCDTEQ 75 (221)
Q Consensus 67 ~C~~C~~~q 75 (221)
+|+.|+++.
T Consensus 5 ~C~rCg~~f 13 (48)
T 4ayb_P 5 RCGKCWKTF 13 (48)
T ss_dssp CCCCTTTTC
T ss_pred EeeccCCCc
Confidence 455555543
No 118
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=41.94 E-value=15 Score=18.38 Aligned_cols=15 Identities=33% Similarity=0.897 Sum_probs=11.9
Q ss_pred CCCCCCcccccchhH
Q 027589 190 YCCPICSKSVIDMSR 204 (221)
Q Consensus 190 ~~CPiCrksi~dm~~ 204 (221)
|.|++|.+++...+.
T Consensus 2 ~~C~~C~k~f~~~~~ 16 (27)
T 1znf_A 2 YKCGLCERSFVEKSA 16 (27)
T ss_dssp CBCSSSCCBCSSHHH
T ss_pred ccCCCCCCcCCCHHH
Confidence 689999999886543
No 119
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=41.78 E-value=17 Score=18.20 Aligned_cols=18 Identities=22% Similarity=0.447 Sum_probs=13.4
Q ss_pred cCCCCCCcccccchhHHH
Q 027589 189 KYCCPICSKSVIDMSRTW 206 (221)
Q Consensus 189 ~~~CPiCrksi~dm~~~~ 206 (221)
.|.|++|.+.+...+.+.
T Consensus 2 ~~~C~~C~~~f~~~~~l~ 19 (29)
T 2m0e_A 2 EHKCPHCDKKFNQVGNLK 19 (29)
T ss_dssp CCCCSSCCCCCCTTTHHH
T ss_pred CCcCCCCCcccCCHHHHH
Confidence 478999999988655433
No 120
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=41.59 E-value=19 Score=18.13 Aligned_cols=16 Identities=13% Similarity=0.727 Sum_probs=12.6
Q ss_pred cCCCCCCcccccchhH
Q 027589 189 KYCCPICSKSVIDMSR 204 (221)
Q Consensus 189 ~~~CPiCrksi~dm~~ 204 (221)
.+.|++|.+++...+.
T Consensus 2 ~~~C~~C~~~f~~~~~ 17 (29)
T 1ard_A 2 SFVCEVCTRAFARQEH 17 (29)
T ss_dssp CCBCTTTCCBCSSHHH
T ss_pred CeECCCCCcccCCHHH
Confidence 4789999999986544
No 121
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=41.59 E-value=5.3 Score=26.84 Aligned_cols=49 Identities=16% Similarity=0.479 Sum_probs=32.0
Q ss_pred CCCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHh---cCcCCCCCCccccc
Q 027589 148 SMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIK---RDKYCCPICSKSVI 200 (221)
Q Consensus 148 ~~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~---~~~~~CPiCrksi~ 200 (221)
..+..|.||.+. .+-+.--.|.-.||..|+..-|. .....||.|....+
T Consensus 7 ~~~~~C~vC~~~----g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~~ 58 (61)
T 1mm2_A 7 HHMEFCRVCKDG----GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPAL 58 (61)
T ss_dssp SSCSSCTTTCCC----SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTCC
T ss_pred CCCCcCCCCCCC----CCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCchh
Confidence 445679999853 12222225789999999985333 24678999987644
No 122
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=41.46 E-value=13 Score=18.87 Aligned_cols=16 Identities=25% Similarity=0.654 Sum_probs=12.8
Q ss_pred cCCCCCCcccccchhH
Q 027589 189 KYCCPICSKSVIDMSR 204 (221)
Q Consensus 189 ~~~CPiCrksi~dm~~ 204 (221)
.|.|++|.+++...+.
T Consensus 3 ~~~C~~C~k~f~~~~~ 18 (28)
T 2kvf_A 3 PYSCSVCGKRFSLKHQ 18 (28)
T ss_dssp SEECSSSCCEESCHHH
T ss_pred CccCCCCCcccCCHHH
Confidence 5789999999886544
No 123
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=41.34 E-value=9.4 Score=27.06 Aligned_cols=44 Identities=20% Similarity=0.373 Sum_probs=29.8
Q ss_pred CCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 151 HHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 151 ~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
-.|..|...|.+. . -...=|..|...|+.+.. ..+|..|++.|.
T Consensus 34 F~C~~C~~~L~~~--~-~~~~~g~~yC~~cy~~~~---~~~C~~C~~~I~ 77 (101)
T 2cup_A 34 FRCAKCLHPLANE--T-FVAKDNKILCNKCTTRED---SPKCKGCFKAIV 77 (101)
T ss_dssp CCCSSSCCCTTSS--C-CEEETTEEECHHHHTTCC---CCBCSSSCCBCC
T ss_pred CcccccCCCCCcC--e-eECcCCEEEChhHhhhhc---CCccccCCCccc
Confidence 3578888776322 1 233447788888886543 468999999997
No 124
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=41.16 E-value=14 Score=25.77 Aligned_cols=48 Identities=21% Similarity=0.318 Sum_probs=29.9
Q ss_pred CCccchhhcccCCCceeeeccCCccCHHHHHHHHh----cCcCCCCCCccccc
Q 027589 152 HCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIK----RDKYCCPICSKSVI 200 (221)
Q Consensus 152 ~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~----~~~~~CPiCrksi~ 200 (221)
-| ||.....+...-+.--.|.-.||..|+..-.. ...|.||.|+++..
T Consensus 14 ~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~~ 65 (79)
T 1wep_A 14 YC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVFG 65 (79)
T ss_dssp CS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTSC
T ss_pred EE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCcccccC
Confidence 45 78765322222233335889999999953221 25799999997653
No 125
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=41.09 E-value=7.3 Score=29.25 Aligned_cols=45 Identities=24% Similarity=0.468 Sum_probs=25.5
Q ss_pred CCCccchhhcccC---CCc---eeeeccCCccCHHHHHHH------HhcCcCCCCCC
Q 027589 151 HHCPICYEYLFDS---LRN---TTVMKCGHTMHCECYHEM------IKRDKYCCPIC 195 (221)
Q Consensus 151 ~~CpICle~lf~s---~~~---v~~L~CGH~~H~~C~~~~------l~~~~~~CPiC 195 (221)
..|.||+..-..+ .++ +.=-.|+-.||..|+... +......||.|
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C 58 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIEC 58 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGG
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCcccc
Confidence 4578887653221 111 222368999999998742 33345555544
No 126
>1qxf_A GR2, 30S ribosomal protein S27E; structural genomics, beta sheet, PSI, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: g.41.8.4
Probab=40.16 E-value=11 Score=26.36 Aligned_cols=35 Identities=26% Similarity=0.459 Sum_probs=23.1
Q ss_pred eeecCCCCccccc------cccCCCCCCCcceeeccccccc
Q 027589 65 QVICSVCDTEQPV------AQVCTNCGVNMGEYFCDICKFY 99 (221)
Q Consensus 65 ~v~C~~C~~~q~~------~~~C~~Cg~~f~~y~C~~C~l~ 99 (221)
.|.|..|..+|.+ ...|..||..+++-.=.+-+|-
T Consensus 7 ~VKCp~C~niq~VFShA~tvV~C~~Cg~~L~~PTGGKA~l~ 47 (66)
T 1qxf_A 7 KVKCPDCEHEQVIFDHPSTIVKCIICGRTVAEPTGGKGNIK 47 (66)
T ss_dssp EEECTTTCCEEEEESSCSSCEECSSSCCEEEECCSSSCEEC
T ss_pred EEECCCCCCceEEEecCceEEEcccCCCEEeecCCcceeee
Confidence 6778888888766 1368888887766554444443
No 127
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=40.01 E-value=4.7 Score=26.16 Aligned_cols=45 Identities=18% Similarity=0.317 Sum_probs=27.5
Q ss_pred CCccchhhcccCCCceeee-ccCCccCHHHHHHHH---hcCcCCCCCCc
Q 027589 152 HCPICYEYLFDSLRNTTVM-KCGHTMHCECYHEMI---KRDKYCCPICS 196 (221)
Q Consensus 152 ~CpICle~lf~s~~~v~~L-~CGH~~H~~C~~~~l---~~~~~~CPiCr 196 (221)
.|.||.....++..-+.-- .|.-.||..|+..-. ....|.||.|+
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 4778877643332222223 578899999976321 12579999985
No 128
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=39.32 E-value=20 Score=19.53 Aligned_cols=18 Identities=22% Similarity=0.578 Sum_probs=14.0
Q ss_pred CcCCCCCCcccccchhHH
Q 027589 188 DKYCCPICSKSVIDMSRT 205 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~ 205 (221)
..|.||+|.+++...+.+
T Consensus 10 k~~~C~~C~k~f~~~~~l 27 (37)
T 1p7a_A 10 KPFQCPDCDRSFSRSDHL 27 (37)
T ss_dssp SSBCCTTTCCCBSSHHHH
T ss_pred CCccCCCCCcccCcHHHH
Confidence 468999999999875443
No 129
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.34 E-value=21 Score=19.19 Aligned_cols=20 Identities=15% Similarity=0.302 Sum_probs=14.8
Q ss_pred CcCCCCCCcccccchhHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWK 207 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~ 207 (221)
..|.|++|.+.+...+.+.+
T Consensus 8 ~~~~C~~C~k~f~~~~~l~~ 27 (36)
T 2elr_A 8 KTHLCDMCGKKFKSKGTLKS 27 (36)
T ss_dssp SSCBCTTTCCBCSSHHHHHH
T ss_pred CCeecCcCCCCcCchHHHHH
Confidence 46899999999986554433
No 130
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=38.30 E-value=23 Score=22.53 Aligned_cols=33 Identities=15% Similarity=0.110 Sum_probs=23.2
Q ss_pred CcCCCCCCcccccchhHHHHHHHHHHHhCCCCC
Q 027589 188 DKYCCPICSKSVIDMSRTWKRIDEEVSLFNLSF 220 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~lD~~i~~~pmP~ 220 (221)
..|.|++|.+.+...+.+.+.+-......|-|.
T Consensus 36 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p~ 68 (70)
T 1x5w_A 36 RPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68 (70)
T ss_dssp CSEECSSSSCEESSHHHHHHHHHHHHSSSCCSS
T ss_pred CCEeCCCCCCccCCHHHHHHHHHHHhCCCCCCC
Confidence 358999999999887766666655555555553
No 131
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=37.92 E-value=9.7 Score=28.66 Aligned_cols=10 Identities=20% Similarity=0.644 Sum_probs=4.3
Q ss_pred eeecCCCCcc
Q 027589 65 QVICSVCDTE 74 (221)
Q Consensus 65 ~v~C~~C~~~ 74 (221)
...|..|+.+
T Consensus 73 ~~~C~~CG~~ 82 (119)
T 2kdx_A 73 ELECKDCSHV 82 (119)
T ss_dssp EEECSSSSCE
T ss_pred eEEcCCCCCE
Confidence 3444444433
No 132
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=37.79 E-value=16 Score=18.42 Aligned_cols=16 Identities=25% Similarity=0.771 Sum_probs=12.8
Q ss_pred cCCCCCCcccccchhH
Q 027589 189 KYCCPICSKSVIDMSR 204 (221)
Q Consensus 189 ~~~CPiCrksi~dm~~ 204 (221)
.|.|++|.+++...+.
T Consensus 3 ~~~C~~C~k~f~~~~~ 18 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFSA 18 (27)
T ss_dssp CEECSSSSCEESSHHH
T ss_pred CccCCCcChhhCCHHH
Confidence 5789999999986544
No 133
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=37.66 E-value=13 Score=19.00 Aligned_cols=16 Identities=25% Similarity=0.829 Sum_probs=12.7
Q ss_pred cCCCCCCcccccchhH
Q 027589 189 KYCCPICSKSVIDMSR 204 (221)
Q Consensus 189 ~~~CPiCrksi~dm~~ 204 (221)
.|.|++|.+++...+.
T Consensus 3 ~~~C~~C~k~f~~~~~ 18 (27)
T 2kvg_A 3 PYRCPLCRAGCPSLAS 18 (27)
T ss_dssp TEEETTTTEEESCHHH
T ss_pred CcCCCCCCcccCCHHH
Confidence 5789999999886543
No 134
>1x3h_A Leupaxin; paxillin family, protein-protein interaction, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=37.56 E-value=15 Score=24.83 Aligned_cols=38 Identities=21% Similarity=0.478 Sum_probs=20.5
Q ss_pred CCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 151 HHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 151 ~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
..|+.|.+.+.+ +.+.. =|..+|..|| +|-.|+++|.+
T Consensus 16 ~~C~~C~~~I~~--~~v~a--~~~~~H~~CF---------~C~~C~~~L~~ 53 (80)
T 1x3h_A 16 PKCGGCNRPVLE--NYLSA--MDTVWHPECF---------VCGDCFTSFST 53 (80)
T ss_dssp CBCTTTCCBCCS--SCEEE--TTEEECTTTC---------BCSSSCCBSCS
T ss_pred CccccCCCeecc--eeEEE--CCCeEecCcC---------ChhhCCCCCCC
Confidence 456666666543 22222 2566666554 46666666653
No 135
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=37.47 E-value=13 Score=26.84 Aligned_cols=33 Identities=27% Similarity=0.590 Sum_probs=22.6
Q ss_pred ccccCCCCCCCcceeeccccccccCCCCcCeeeCCCCCcceeCC
Q 027589 77 VAQVCTNCGVNMGEYFCDICKFYDDDIEKGQFHCDDCGICRIGG 120 (221)
Q Consensus 77 ~~~~C~~Cg~~f~~y~C~~C~l~dd~~~k~~yHC~~CgiCR~G~ 120 (221)
..-.||+||...- | ++...+++|+.||-=-.||
T Consensus 26 ~~y~Cp~CG~~~v---------~--r~atGiW~C~~Cg~~~agg 58 (83)
T 1vq8_Z 26 EDHACPNCGEDRV---------D--RQGTGIWQCSYCDYKFTGG 58 (83)
T ss_dssp SCEECSSSCCEEE---------E--EEETTEEEETTTCCEEECC
T ss_pred ccCcCCCCCCcce---------e--ccCCCeEECCCCCCEecCC
Confidence 3446777776431 2 3456899999999887776
No 136
>3u5c_f 40S ribosomal protein S31; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3u5g_f
Probab=37.31 E-value=16 Score=28.84 Aligned_cols=21 Identities=29% Similarity=0.923 Sum_probs=15.5
Q ss_pred cccCCC--CCC------Ccceeecccccc
Q 027589 78 AQVCTN--CGV------NMGEYFCDICKF 98 (221)
Q Consensus 78 ~~~C~~--Cg~------~f~~y~C~~C~l 98 (221)
...||+ ||+ -|+|+||.+|.+
T Consensus 118 ~~~c~~~~cg~g~fma~h~~r~~cgkc~~ 146 (152)
T 3u5c_f 118 RRECSNPTCGAGVFLANHKDRLYCGKCHS 146 (152)
T ss_dssp SCBCCSTTSCSSSBEEECSSCEEESSSSS
T ss_pred cCcCCCccCCCceEecccCCCcccCCCce
Confidence 467999 987 335888888864
No 137
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=37.16 E-value=15 Score=24.18 Aligned_cols=38 Identities=26% Similarity=0.723 Sum_probs=21.3
Q ss_pred CCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 151 HHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 151 ~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
..|+.|.+.+.+ +.+.. =|..+|..|| +|-.|++.|.+
T Consensus 6 ~~C~~C~~~I~~--~~~~a--~~~~~H~~CF---------~C~~C~~~L~~ 43 (70)
T 2d8x_A 6 SGCHQCGEFIIG--RVIKA--MNNSWHPECF---------RCDLCQEVLAD 43 (70)
T ss_dssp SBCSSSCCBCCS--CCEEE--TTEEECTTTS---------BCSSSCCBCSS
T ss_pred CcCccCCCEecc--eEEEE--CcccccccCC---------EeCCCCCcCCC
Confidence 456677766542 22222 2566776654 56667766654
No 138
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=37.06 E-value=24 Score=32.30 Aligned_cols=48 Identities=19% Similarity=0.516 Sum_probs=33.9
Q ss_pred CCCCccchhhcccCCCceeeeccCCc--cCHHHHHHHHh-cCcCCCCCCccccc
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCGHT--MHCECYHEMIK-RDKYCCPICSKSVI 200 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CGH~--~H~~C~~~~l~-~~~~~CPiCrksi~ 200 (221)
.-.|||=+..|. .+++...|.|. |=..=|.++.. ....+||+|.+.+.
T Consensus 249 SL~CPlS~~ri~---~PvRg~~C~HlQCFDl~sfL~~~~~~~~W~CPIC~k~~~ 299 (371)
T 3i2d_A 249 SLQCPISYTRMK---YPSKSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDIA 299 (371)
T ss_dssp ESBCTTTSSBCS---SEEEETTCCSSCCEEHHHHHHHHHHSCCCBCTTTCCBCC
T ss_pred eecCCCcccccc---ccCcCCcCCCcceECHHHHHHHhhcCCceeCCCCCcccC
Confidence 347998777643 58899999987 55544444432 35789999999883
No 139
>2cor_A Pinch protein; LIM domain, particularly interesting NEW Cys- His protein, LIM and senescent cell antigen-like domains 1, structural genomics; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=37.03 E-value=14 Score=25.28 Aligned_cols=39 Identities=15% Similarity=0.353 Sum_probs=25.1
Q ss_pred CCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
...|+-|.+.+.+ +.+. -=|..+|..|| +|-.|+++|.+
T Consensus 15 ~~~C~~C~~~I~~--~~v~--a~~~~~H~~CF---------~C~~C~~~L~~ 53 (79)
T 2cor_A 15 KYICQKCHAIIDE--QPLI--FKNDPYHPDHF---------NCANCGKELTA 53 (79)
T ss_dssp CCBCTTTCCBCCS--CCCC--CSSSCCCTTTS---------BCSSSCCBCCT
T ss_pred CCCCccCCCEecc--eEEE--ECcceeCCCCC---------EeCCCCCccCC
Confidence 4568888887662 2232 23777887664 67778887764
No 140
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=36.73 E-value=27 Score=30.92 Aligned_cols=24 Identities=25% Similarity=0.643 Sum_probs=20.9
Q ss_pred ceeecCCCCcccccc-ccCCCCCCC
Q 027589 64 KQVICSVCDTEQPVA-QVCTNCGVN 87 (221)
Q Consensus 64 ~~v~C~~C~~~q~~~-~~C~~Cg~~ 87 (221)
+-..|+.|+++..+. ..|++||..
T Consensus 207 R~l~Cs~C~t~W~~~R~~C~~Cg~~ 231 (309)
T 2fiy_A 207 RYLSCSLCACEWHYVRIKCSHCEES 231 (309)
T ss_dssp EEEEETTTCCEEECCTTSCSSSCCC
T ss_pred EEEEeCCCCCEEeecCcCCcCCCCC
Confidence 478999999998774 689999987
No 141
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=36.67 E-value=15 Score=25.74 Aligned_cols=40 Identities=18% Similarity=0.371 Sum_probs=23.4
Q ss_pred CCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 149 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
....|+.|.+.+.+ +.+. .=|..+|..|| +|-.|++.|.+
T Consensus 24 ~~~~C~~C~~~I~~--~~v~--a~~~~~H~~CF---------~C~~C~~~L~~ 63 (90)
T 2dar_A 24 RTPMCAHCNQVIRG--PFLV--ALGKSWHPEEF---------NCAHCKNTMAY 63 (90)
T ss_dssp CCCBBSSSCCBCCS--CEEE--ETTEEECTTTC---------BCSSSCCBCSS
T ss_pred CCCCCccCCCEecc--eEEE--ECCccccccCC---------ccCCCCCCCCC
Confidence 34567777776532 2222 33677777654 56677777653
No 142
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.66 E-value=9.4 Score=27.00 Aligned_cols=64 Identities=22% Similarity=0.649 Sum_probs=36.6
Q ss_pred ccceeecCccCccccccccCcceeecCCCCCCCccchhhcccCCCceeee--ccCCccCHHHHHHHHhc---C-cCCCCC
Q 027589 121 RENYFHCKRCGSCYSTSLRNNHLCIENSMHHHCPICYEYLFDSLRNTTVM--KCGHTMHCECYHEMIKR---D-KYCCPI 194 (221)
Q Consensus 121 ~~~~fHC~~C~~C~s~~~~~~H~C~e~~~~~~CpICle~lf~s~~~v~~L--~CGH~~H~~C~~~~l~~---~-~~~CPi 194 (221)
+.++..|..|+. ...-.|. +..|.||... .+. ...++ .|.-.||..|++.=|.. . ...||.
T Consensus 7 ~~~~~~c~~C~~------~~~w~C~----~c~C~vC~~~-~~~--~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~ 73 (77)
T 2e6s_A 7 GRNDTECDLCGG------DPEKKCH----SCSCRVCGGK-HEP--NMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPS 73 (77)
T ss_dssp CCCCCCCTTTCS------CSSSCCS----SSSCSSSCCC-CCS--TTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTT
T ss_pred ccCCccChhhcC------CCCeECC----CCCCcCcCCc-CCC--CCEEEcCCCCccccccccCCCccCCCCCCCcCCcC
Confidence 346666666654 1223343 2368888863 111 12222 67889999999753331 3 568998
Q ss_pred Ccc
Q 027589 195 CSK 197 (221)
Q Consensus 195 Crk 197 (221)
|..
T Consensus 74 C~~ 76 (77)
T 2e6s_A 74 CKT 76 (77)
T ss_dssp TCC
T ss_pred ccC
Confidence 864
No 143
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=36.63 E-value=23 Score=19.15 Aligned_cols=20 Identities=30% Similarity=0.688 Sum_probs=14.9
Q ss_pred cCCCCCCcccccchhHHHHH
Q 027589 189 KYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 189 ~~~CPiCrksi~dm~~~~~~ 208 (221)
.|.|++|.+.+...+.+.+.
T Consensus 2 p~~C~~C~k~F~~~~~L~~H 21 (33)
T 1rim_A 2 KFACPECPKRFMRSDHLSKH 21 (33)
T ss_dssp CCCCSSSCCCCSSHHHHHHH
T ss_pred cccCCCCCchhCCHHHHHHH
Confidence 47899999999876554444
No 144
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=36.08 E-value=17 Score=18.35 Aligned_cols=16 Identities=31% Similarity=0.877 Sum_probs=12.5
Q ss_pred cCCCCCCcccccchhH
Q 027589 189 KYCCPICSKSVIDMSR 204 (221)
Q Consensus 189 ~~~CPiCrksi~dm~~ 204 (221)
.|.|++|.+.+...+.
T Consensus 2 ~~~C~~C~k~f~~~~~ 17 (29)
T 1rik_A 2 KFACPECPKRFMRSDH 17 (29)
T ss_dssp CEECSSSSCEESCSHH
T ss_pred CccCCCCCchhCCHHH
Confidence 3789999999886544
No 145
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=35.62 E-value=19 Score=18.09 Aligned_cols=17 Identities=18% Similarity=0.341 Sum_probs=12.9
Q ss_pred cCCCCCCcccccchhHH
Q 027589 189 KYCCPICSKSVIDMSRT 205 (221)
Q Consensus 189 ~~~CPiCrksi~dm~~~ 205 (221)
.+.|++|.+++...+.+
T Consensus 2 ~~~C~~C~k~f~~~~~l 18 (29)
T 2m0f_A 2 PLKCRECGKQFTTSGNL 18 (29)
T ss_dssp CEECTTTSCEESCHHHH
T ss_pred CccCCCCCCccCChhHH
Confidence 37899999998865443
No 146
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=35.60 E-value=18 Score=18.20 Aligned_cols=18 Identities=28% Similarity=0.606 Sum_probs=13.6
Q ss_pred cCCCCCCcccccchhHHH
Q 027589 189 KYCCPICSKSVIDMSRTW 206 (221)
Q Consensus 189 ~~~CPiCrksi~dm~~~~ 206 (221)
.|.|++|.+++...+.+.
T Consensus 3 ~~~C~~C~~~f~~~~~l~ 20 (30)
T 2m0d_A 3 PYQCDYCGRSFSDPTSKM 20 (30)
T ss_dssp CEECTTTCCEESCHHHHH
T ss_pred CccCCCCCcccCCHHHHH
Confidence 478999999988665433
No 147
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=35.46 E-value=26 Score=31.93 Aligned_cols=47 Identities=23% Similarity=0.559 Sum_probs=34.2
Q ss_pred CCCccchhhcccCCCceeeeccCCc--cCHHHHHHHHh-cCcCCCCCCccccc
Q 027589 151 HHCPICYEYLFDSLRNTTVMKCGHT--MHCECYHEMIK-RDKYCCPICSKSVI 200 (221)
Q Consensus 151 ~~CpICle~lf~s~~~v~~L~CGH~--~H~~C~~~~l~-~~~~~CPiCrksi~ 200 (221)
-.|||=+..|. .+++...|.|. |=..=|.++.. ....+||+|++.+.
T Consensus 216 L~CPlS~~ri~---~P~Rg~~C~HlqCFDl~sfL~~~~~~~~W~CPiC~k~~~ 265 (360)
T 4fo9_A 216 LMCPLGKMRLT---IPCRAVTCTHLQCFDAALYLQMNEKKPTWICPVCDKKAA 265 (360)
T ss_dssp SBCTTTCSBCS---SEEEETTCCCCCCEEHHHHHHHHHHSCCCBCTTTCSBCC
T ss_pred eeCCCccceec---cCCcCCCCCCCccCCHHHHHHHHhhCCCeECCCCCcccC
Confidence 46998776643 58899999987 65555555543 34789999999885
No 148
>3u5c_b RP61, YS20, 40S ribosomal protein S27-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_X 3u5g_b
Probab=35.15 E-value=23 Score=25.71 Aligned_cols=36 Identities=22% Similarity=0.325 Sum_probs=26.8
Q ss_pred ceeecCCCCccccc------cccCCCCCCCcceeeccccccc
Q 027589 64 KQVICSVCDTEQPV------AQVCTNCGVNMGEYFCDICKFY 99 (221)
Q Consensus 64 ~~v~C~~C~~~q~~------~~~C~~Cg~~f~~y~C~~C~l~ 99 (221)
-.|.|..|..+|.| ...|..||..+++-.=.+-+|-
T Consensus 33 m~VkCp~C~~~q~VFSha~t~V~C~~Cg~~L~~PTGGKa~l~ 74 (82)
T 3u5c_b 33 LDVKCPGCLNITTVFSHAQTAVTCESCSTILCTPTGGKAKLS 74 (82)
T ss_dssp EEEECTTSCSCEEEESBCSSCCCCSSSCCCCEECCSSBCEEC
T ss_pred EEEECCCCCCeeEEEecCCeEEEccccCCEEeccCCCCeEec
Confidence 48999999999877 2479999999877654444443
No 149
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=35.13 E-value=23 Score=18.04 Aligned_cols=18 Identities=17% Similarity=0.547 Sum_probs=13.6
Q ss_pred cCCCCCCcccccchhHHH
Q 027589 189 KYCCPICSKSVIDMSRTW 206 (221)
Q Consensus 189 ~~~CPiCrksi~dm~~~~ 206 (221)
.|.|+.|.+++...+.+.
T Consensus 2 ~~~C~~C~k~f~~~~~l~ 19 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLLI 19 (30)
T ss_dssp CSBCTTTCCBCSSSHHHH
T ss_pred CcCCcccCcccCChHHHH
Confidence 478999999998665433
No 150
>3j20_W 30S ribosomal protein S27E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=35.08 E-value=16 Score=25.36 Aligned_cols=35 Identities=29% Similarity=0.370 Sum_probs=25.3
Q ss_pred ceeecCCCCccccc------cccCCCCCCCcceeecccccc
Q 027589 64 KQVICSVCDTEQPV------AQVCTNCGVNMGEYFCDICKF 98 (221)
Q Consensus 64 ~~v~C~~C~~~q~~------~~~C~~Cg~~f~~y~C~~C~l 98 (221)
-.|.|..|..+|.+ ...|..||..+++-.=.+-+|
T Consensus 14 m~VkCp~C~~~q~VFSha~t~V~C~~Cgt~L~~PTGGKa~l 54 (63)
T 3j20_W 14 LRVKCIDCGNEQIVFSHPATKVRCLICGATLVEPTGGKGIV 54 (63)
T ss_dssp EEEECSSSCCEEEEESSCSSCEECSSSCCEEEECCSSSCEE
T ss_pred EEEECCCCCCeeEEEecCCeEEEccCcCCEEecCCCCcEEE
Confidence 47899999999876 236888988887655444443
No 151
>1ryq_A DNA-directed RNA polymerase, subunit E''; structural genomics, zinc, PSI, protein structure initiative; 1.38A {Pyrococcus furiosus} SCOP: g.41.9.3 PDB: 3qqc_E
Probab=35.03 E-value=20 Score=25.24 Aligned_cols=24 Identities=21% Similarity=0.551 Sum_probs=18.6
Q ss_pred cceeecCCCCccccccccCCCCCCC
Q 027589 63 VKQVICSVCDTEQPVAQVCTNCGVN 87 (221)
Q Consensus 63 ~~~v~C~~C~~~q~~~~~C~~Cg~~ 87 (221)
..+..|..|...+ ..+.||+||..
T Consensus 9 ~~~~AC~~C~~~~-~~~~CPnC~s~ 32 (69)
T 1ryq_A 9 SSEKACRHCHYIT-SEDRCPVCGSR 32 (69)
T ss_dssp --CEEETTTCBEE-SSSSCTTTCCC
T ss_pred chhhhHHhCCccc-cCCcCCCccCC
Confidence 4678899999977 77899999843
No 152
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=34.87 E-value=25 Score=22.93 Aligned_cols=32 Identities=22% Similarity=0.712 Sum_probs=17.3
Q ss_pred ccCCCCCCCcceeecccccc-c--cCCCCcCeeeCCCCC
Q 027589 79 QVCTNCGVNMGEYFCDICKF-Y--DDDIEKGQFHCDDCG 114 (221)
Q Consensus 79 ~~C~~Cg~~f~~y~C~~C~l-~--dd~~~k~~yHC~~Cg 114 (221)
..|+.||..-+.|+ .+ + .|++....|.|..||
T Consensus 16 ~~Cp~Cg~~~~~~~----q~Q~rsadep~T~fy~C~~Cg 50 (57)
T 1qyp_A 16 ITCPKCGNDTAYWW----EMQTRAGDEPSTIFYKCTKCG 50 (57)
T ss_dssp CCCTTTCCSEEEEE----EECCSSSSCSSEEEEEESSSC
T ss_pred eECCCCCCCEEEEE----EeecccCCCCCcEEEEcCCCC
Confidence 35777777655555 11 1 233455566666665
No 153
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=34.34 E-value=14 Score=24.20 Aligned_cols=43 Identities=21% Similarity=0.473 Sum_probs=27.0
Q ss_pred CCCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 148 SMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 148 ~~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
.....|+.|.+.+... +.+ +..=|..+|..|| +|-.|+++|.+
T Consensus 9 ~~~~~C~~C~~~i~~~-e~~-~~~~~~~~H~~CF---------~C~~C~~~L~~ 51 (72)
T 3f6q_B 9 SASATCERCKGGFAPA-EKI-VNSNGELYHEQCF---------VCAQCFQQFPE 51 (72)
T ss_dssp CTTCBCTTTCCBCCTT-CEE-EEETTEEEETTTS---------SCTTTCCCCGG
T ss_pred cCCccchhcCccccCC-ceE-EEeCcCeeCcCCC---------cccCCCCCCCC
Confidence 3455788888876543 222 1133677887776 57778888764
No 154
>3lpe_B DNA-directed RNA polymerase subunit E''; transcription regulation, SPT4, SPT5, NUSG, archaea, evoluti directed RNA polymerase; 1.90A {Methanocaldococcus jannaschii} SCOP: g.41.9.0
Probab=34.25 E-value=16 Score=24.79 Aligned_cols=19 Identities=21% Similarity=0.551 Sum_probs=14.3
Q ss_pred ecCCCCccccccccCCCCCC
Q 027589 67 ICSVCDTEQPVAQVCTNCGV 86 (221)
Q Consensus 67 ~C~~C~~~q~~~~~C~~Cg~ 86 (221)
-|+.|+..++.. .|++|+.
T Consensus 3 AC~~C~~v~~~~-~CpnC~~ 21 (59)
T 3lpe_B 3 ACLKCKYLTNDE-ICPICHS 21 (59)
T ss_dssp EETTTCBEESSS-BCTTTCC
T ss_pred ccccCCcccCCC-CCCCCCC
Confidence 478888887665 6888876
No 155
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=34.25 E-value=19 Score=23.58 Aligned_cols=37 Identities=24% Similarity=0.607 Sum_probs=20.9
Q ss_pred CCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 151 HHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 151 ~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
..|+.|.+.+.. +.+.. =|..+|..|| +|-.|+++|.
T Consensus 6 ~~C~~C~~~I~~--~~~~a--~~~~~H~~CF---------~C~~C~~~L~ 42 (69)
T 2cur_A 6 SGCVKCNKAITS--GGITY--QDQPWHADCF---------VCVTCSKKLA 42 (69)
T ss_dssp CCCSSSCCCCCT--TCEEE--TTEEECTTTT---------BCTTTCCBCT
T ss_pred CCCcccCCEeCc--ceEEE--CccccccCcC---------EECCCCCCCC
Confidence 456777766542 22322 3567776654 4666776664
No 156
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=33.93 E-value=9.3 Score=31.39 Aligned_cols=44 Identities=18% Similarity=0.548 Sum_probs=31.1
Q ss_pred CCCCCCccchhhcccCCCceeee---ccCCccCHHHHHHHHhc---CcCCCCCCccc
Q 027589 148 SMHHHCPICYEYLFDSLRNTTVM---KCGHTMHCECYHEMIKR---DKYCCPICSKS 198 (221)
Q Consensus 148 ~~~~~CpICle~lf~s~~~v~~L---~CGH~~H~~C~~~~l~~---~~~~CPiCrks 198 (221)
..+..|.||... ++ .| .|.-.||..|+..-+.. +...||.|++.
T Consensus 5 ~~~~~C~~C~~~----g~---ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~ 54 (207)
T 3u5n_A 5 PNEDWCAVCQNG----GD---LLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDI 54 (207)
T ss_dssp SSCSSBTTTCCC----EE---EEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCS
T ss_pred CCCCCCCCCCCC----Cc---eEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCc
Confidence 445679999753 11 33 57899999999765542 46789999875
No 157
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=33.75 E-value=52 Score=23.09 Aligned_cols=14 Identities=14% Similarity=0.726 Sum_probs=8.3
Q ss_pred cceeecCccCcccc
Q 027589 122 ENYFHCKRCGSCYS 135 (221)
Q Consensus 122 ~~~fHC~~C~~C~s 135 (221)
+....|+.|..-+-
T Consensus 39 ~~ll~CD~C~~~yH 52 (77)
T 3shb_A 39 DKQLMCDECDMAFH 52 (77)
T ss_dssp GGEEECTTTCCEEE
T ss_pred cceeEeCCCCCccC
Confidence 45666777665443
No 158
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=32.57 E-value=2.8 Score=31.42 Aligned_cols=50 Identities=20% Similarity=0.373 Sum_probs=32.2
Q ss_pred CCCccchhhcccCCCceeee-ccCCccCHHHHHHHH---------hcCcCCCCCCccccc
Q 027589 151 HHCPICYEYLFDSLRNTTVM-KCGHTMHCECYHEMI---------KRDKYCCPICSKSVI 200 (221)
Q Consensus 151 ~~CpICle~lf~s~~~v~~L-~CGH~~H~~C~~~~l---------~~~~~~CPiCrksi~ 200 (221)
..|+||.....+..+-+.-= .|.-.||..|+.--. ....|.||.|++...
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~~ 63 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKE 63 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTTT
T ss_pred CCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcCC
Confidence 46999998754433222221 577999999985221 114799999987643
No 159
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=31.97 E-value=22 Score=18.94 Aligned_cols=18 Identities=28% Similarity=0.711 Sum_probs=13.9
Q ss_pred CcCCCCCCcccccchhHH
Q 027589 188 DKYCCPICSKSVIDMSRT 205 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~ 205 (221)
..|.|++|.+.+...+.+
T Consensus 6 k~~~C~~C~k~f~~~~~L 23 (35)
T 2elx_A 6 SGYVCALCLKKFVSSIRL 23 (35)
T ss_dssp CSEECSSSCCEESSHHHH
T ss_pred CCeECCCCcchhCCHHHH
Confidence 358999999999865443
No 160
>3gox_A Restriction endonuclease HPY99I; endonuclease-DNA complex, restriction enzyme, HPY99I, pseudopalindrome; HET: 1PE; 1.50A {Helicobacter pylori} PDB: 3fc3_A*
Probab=31.46 E-value=47 Score=27.88 Aligned_cols=73 Identities=19% Similarity=0.270 Sum_probs=47.5
Q ss_pred eeCCccceeecCccCccccccccCcceeecCC---CCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCc----
Q 027589 117 RIGGRENYFHCKRCGSCYSTSLRNNHLCIENS---MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDK---- 189 (221)
Q Consensus 117 R~G~~~~~fHC~~C~~C~s~~~~~~H~C~e~~---~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~---- 189 (221)
+.|.+.....|.+|+.=-+.+.+...+=..+. ....|.-|.-.+ .+-.+ =..=+++++....
T Consensus 68 ~~~~~~G~K~C~~Cg~~Kp~seF~rnkt~~DG~~~l~s~CkeC~~~l--r~YGI---------T~eey~~L~e~Qg~~~~ 136 (200)
T 3gox_A 68 RTGKGYDKKICNICHILKNTDGFEINQTDAKGRKTTRPSCRECRKNI--DGVKL---------SSTEKKKMDEIAPPKGS 136 (200)
T ss_dssp GSSTTSSEEECTTTCBEEEGGGSCEEEECTTSCEEECSSCHHHHHHH--HCSCC---------CHHHHHHHHTTCCCTTC
T ss_pred eccccCCCeECCCCCCCcchhhhcccccCCCCCcccCccChhhhhcc--CCcCC---------CHHHHHHHHHHcccCCC
Confidence 77888889999999998777766444444334 567888887543 11111 0112455565555
Q ss_pred -CCCCCCccccc
Q 027589 190 -YCCPICSKSVI 200 (221)
Q Consensus 190 -~~CPiCrksi~ 200 (221)
.+||||++...
T Consensus 137 ~G~C~ICg~~~~ 148 (200)
T 3gox_A 137 VFTCPICEKRSI 148 (200)
T ss_dssp EEECTTTCCEEE
T ss_pred CCcCcCCCCCCC
Confidence 78999998775
No 161
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.41 E-value=51 Score=18.90 Aligned_cols=21 Identities=19% Similarity=0.252 Sum_probs=15.3
Q ss_pred CcCCCCCCcccccchhHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~ 208 (221)
..|.|++|.+++...+.+-+.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2emz_A 11 RPFKCNECGKGFGRRSHLAGH 31 (46)
T ss_dssp CSCCCSSSCCCCSSHHHHHHH
T ss_pred CCeECCCCCcccCCHHHHHHH
Confidence 468999999999876554443
No 162
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=31.39 E-value=9.7 Score=24.89 Aligned_cols=38 Identities=26% Similarity=0.545 Sum_probs=22.1
Q ss_pred CCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 151 HHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 151 ~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
..|+.|.+.+. + +. +..=|..+|..|| +|-.|+++|.+
T Consensus 6 ~~C~~C~~~I~-~-~~--~~a~~~~~H~~CF---------~C~~C~~~L~~ 43 (66)
T 1nyp_A 6 PICGACRRPIE-G-RV--VNAMGKQWHVEHF---------VCAKCEKPFLG 43 (66)
T ss_dssp CEETTTTEECC-S-CE--ECCTTSBEETTTC---------BCTTTCCBCSS
T ss_pred CCCcccCCEec-c-eE--EEECccccccCcC---------EECCCCCCCCC
Confidence 45777777655 2 22 2233667776654 56677777653
No 163
>1v6g_A Actin binding LIM protein 2; LIM domain, zinc binding domain, ablim2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.19 E-value=21 Score=24.26 Aligned_cols=38 Identities=21% Similarity=0.632 Sum_probs=25.2
Q ss_pred CCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 151 HHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 151 ~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
..|+.|.+.+.+ +.+.. =|..+|..|| +|-.|++.|.+
T Consensus 16 ~~C~~C~~~I~~--~~v~a--~~~~wH~~CF---------~C~~C~~~L~~ 53 (81)
T 1v6g_A 16 TRCFSCDQFIEG--EVVSA--LGKTYHPDCF---------VCAVCRLPFPP 53 (81)
T ss_dssp CBCTTTCCBCCS--CCEEE--TTEEECTTTS---------SCSSSCCCCCS
T ss_pred CcCccccCEecc--ceEEE--CCceeCccCC---------ccccCCCCCCC
Confidence 468888887652 22332 3788887765 57778887753
No 164
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=31.07 E-value=26 Score=20.60 Aligned_cols=9 Identities=0% Similarity=0.135 Sum_probs=5.1
Q ss_pred CeeeCCCCC
Q 027589 106 GQFHCDDCG 114 (221)
Q Consensus 106 ~~yHC~~Cg 114 (221)
.+|.|+.||
T Consensus 39 k~~~C~~C~ 47 (48)
T 2epr_A 39 KPYSSGPSS 47 (48)
T ss_dssp CCCCSCCCC
T ss_pred CCccCCCCC
Confidence 456666554
No 165
>2l3k_A Rhombotin-2, linker, LIM domain-binding protein 1; LMO2(LIM2)-LDB1(LID), chimera, fusion protein, oncoprotein; NMR {Mus musculus} PDB: 2l6y_B 2l6z_C
Probab=30.94 E-value=16 Score=27.21 Aligned_cols=14 Identities=14% Similarity=-0.038 Sum_probs=8.4
Q ss_pred CCccCHHHHHHHHh
Q 027589 173 GHTMHCECYHEMIK 186 (221)
Q Consensus 173 GH~~H~~C~~~~l~ 186 (221)
|..|...|+.+++.
T Consensus 57 g~~yC~~cy~~~~~ 70 (123)
T 2l3k_A 57 SDIVCEQDIYEWTK 70 (123)
T ss_dssp SSEEEGGGHHHHHH
T ss_pred CEEEcHHHhHHHhc
Confidence 55666666666553
No 166
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.92 E-value=24 Score=19.15 Aligned_cols=18 Identities=17% Similarity=0.340 Sum_probs=13.7
Q ss_pred CcCCCCCCcccccchhHH
Q 027589 188 DKYCCPICSKSVIDMSRT 205 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~ 205 (221)
..|.|++|.+.+...+.+
T Consensus 8 k~~~C~~C~k~f~~~~~l 25 (36)
T 2els_A 8 KIFTCEYCNKVFKFKHSL 25 (36)
T ss_dssp CCEECTTTCCEESSHHHH
T ss_pred CCEECCCCCceeCCHHHH
Confidence 358899999998865443
No 167
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=30.39 E-value=17 Score=24.78 Aligned_cols=24 Identities=25% Similarity=0.653 Sum_probs=14.8
Q ss_pred ceeecCCCCcc--ccccccCCCCCCC
Q 027589 64 KQVICSVCDTE--QPVAQVCTNCGVN 87 (221)
Q Consensus 64 ~~v~C~~C~~~--q~~~~~C~~Cg~~ 87 (221)
++.+|..|..+ ++..-+||.|++.
T Consensus 10 ~~~~C~vC~~~~~~~akY~CPrC~~r 35 (59)
T 1x4s_A 10 PAGPCGFCPAGEVQPARYTCPRCNAP 35 (59)
T ss_dssp CCEEECSSCTTCCEEECEECTTTCCE
T ss_pred CCCcCcCCCCCcCCCccccCcCCCCC
Confidence 35678888752 4455566666643
No 168
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=30.26 E-value=24 Score=24.70 Aligned_cols=7 Identities=57% Similarity=1.578 Sum_probs=3.8
Q ss_pred eCCCCCc
Q 027589 109 HCDDCGI 115 (221)
Q Consensus 109 HC~~Cgi 115 (221)
+|+.||-
T Consensus 47 rCp~CG~ 53 (70)
T 1twf_L 47 RCKDCGH 53 (70)
T ss_dssp CCSSSCC
T ss_pred cCCCCCc
Confidence 5555553
No 169
>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7
Probab=30.15 E-value=37 Score=22.94 Aligned_cols=26 Identities=23% Similarity=0.645 Sum_probs=21.1
Q ss_pred ccceeecCCCCccccc-cccCCCCCCC
Q 027589 62 DVKQVICSVCDTEQPV-AQVCTNCGVN 87 (221)
Q Consensus 62 ~~~~v~C~~C~~~q~~-~~~C~~Cg~~ 87 (221)
....++|+.|+...++ +..|..||..
T Consensus 16 ~~~k~ICrkC~ARnp~~A~~CRKCg~~ 42 (56)
T 2ayj_A 16 VFLKKVCRKCGALNPIRATKCRRCHST 42 (56)
T ss_dssp SCCCEEETTTCCEECTTCSSCTTTCCC
T ss_pred HhchhhhccccCcCCcccccccCCCCC
Confidence 3468999999999888 5789888854
No 170
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.05 E-value=24 Score=19.07 Aligned_cols=17 Identities=24% Similarity=0.456 Sum_probs=13.3
Q ss_pred CcCCCCCCcccccchhH
Q 027589 188 DKYCCPICSKSVIDMSR 204 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~ 204 (221)
..|.|++|.+.+...+.
T Consensus 8 k~~~C~~C~k~f~~~~~ 24 (36)
T 2elv_A 8 LLYDCHICERKFKNELD 24 (36)
T ss_dssp CCEECSSSCCEESSHHH
T ss_pred CCeECCCCCCccCCHHH
Confidence 35899999999986544
No 171
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.04 E-value=46 Score=19.20 Aligned_cols=21 Identities=29% Similarity=0.409 Sum_probs=14.5
Q ss_pred CcCCCCCCcccccchhHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~ 208 (221)
..|.|++|.+.+...+.+-+.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2ytm_A 11 KPYKCMECGKAFGDNSSCTQH 31 (46)
T ss_dssp CSSSBTTTTBCCSSHHHHHHH
T ss_pred CCcCCCCCCchhCCHHHHHHH
Confidence 357888888888866544443
No 172
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.98 E-value=34 Score=19.09 Aligned_cols=20 Identities=25% Similarity=0.587 Sum_probs=14.9
Q ss_pred CcCCCCCCcccccchhHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWK 207 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~ 207 (221)
..|.|++|.+++...+.+-+
T Consensus 9 k~~~C~~C~k~f~~~~~L~~ 28 (42)
T 2yte_A 9 KPYSCAECKETFSDNNRLVQ 28 (42)
T ss_dssp CSCBCTTTCCBCSSHHHHHH
T ss_pred CCeECCCCCCccCCHHHHHH
Confidence 46899999999987654333
No 173
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=35.65 E-value=11 Score=18.88 Aligned_cols=15 Identities=33% Similarity=0.791 Sum_probs=11.2
Q ss_pred cCCCCCCcccccchh
Q 027589 189 KYCCPICSKSVIDMS 203 (221)
Q Consensus 189 ~~~CPiCrksi~dm~ 203 (221)
.|.|++|.+++...+
T Consensus 2 p~~C~~C~k~f~~~~ 16 (26)
T 2lvu_A 2 PYVCERCGKRFVQSS 16 (26)
Confidence 378999998887543
No 174
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=29.47 E-value=33 Score=21.71 Aligned_cols=8 Identities=25% Similarity=0.933 Sum_probs=3.6
Q ss_pred CCCCCCCc
Q 027589 81 CTNCGVNM 88 (221)
Q Consensus 81 C~~Cg~~f 88 (221)
|+.||..|
T Consensus 17 C~~C~k~F 24 (62)
T 1vd4_A 17 CPVCSSTF 24 (62)
T ss_dssp CSSSCCEE
T ss_pred CCCCCchh
Confidence 44444444
No 175
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.46 E-value=26 Score=18.85 Aligned_cols=18 Identities=28% Similarity=0.517 Sum_probs=13.6
Q ss_pred CcCCCCCCcccccchhHH
Q 027589 188 DKYCCPICSKSVIDMSRT 205 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~ 205 (221)
..|.|++|.+.+...+.+
T Consensus 8 k~~~C~~C~k~f~~~~~l 25 (36)
T 2elt_A 8 KPYKCPQCSYASAIKANL 25 (36)
T ss_dssp CSEECSSSSCEESSHHHH
T ss_pred CCCCCCCCCcccCCHHHH
Confidence 358999999998865443
No 176
>3iz6_X 40S ribosomal protein S27 (S27E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=29.42 E-value=29 Score=25.45 Aligned_cols=35 Identities=20% Similarity=0.360 Sum_probs=25.8
Q ss_pred eeecCCCCccccc------cccCCCCCCCcceeeccccccc
Q 027589 65 QVICSVCDTEQPV------AQVCTNCGVNMGEYFCDICKFY 99 (221)
Q Consensus 65 ~v~C~~C~~~q~~------~~~C~~Cg~~f~~y~C~~C~l~ 99 (221)
.|.|..|..+|.+ ...|..||..+++-.=.+-+|-
T Consensus 36 ~VkCp~C~~~~~VFShA~t~V~C~~CgtvL~~PTGGKa~l~ 76 (86)
T 3iz6_X 36 DVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLT 76 (86)
T ss_dssp EEECTTTCCEEEEETTCSSCCCCSSSCCCCSCCCSSSCCCS
T ss_pred EEECCCCCCeeEEEecCCcEEEccCCCCEeecCCCCCEEec
Confidence 6899999999877 2479999988877655544443
No 177
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=28.99 E-value=27 Score=22.49 Aligned_cols=13 Identities=46% Similarity=1.464 Sum_probs=9.3
Q ss_pred cceeecccccc-cc
Q 027589 88 MGEYFCDICKF-YD 100 (221)
Q Consensus 88 f~~y~C~~C~l-~d 100 (221)
|.+|-|.+|-+ ||
T Consensus 2 m~~y~C~vCGyvyd 15 (46)
T 6rxn_A 2 MQKYVCNVCGYEYD 15 (46)
T ss_dssp CCCEEETTTCCEEC
T ss_pred CCEEECCCCCeEEe
Confidence 56788888865 44
No 178
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.81 E-value=27 Score=18.92 Aligned_cols=18 Identities=17% Similarity=0.473 Sum_probs=13.8
Q ss_pred CcCCCCCCcccccchhHH
Q 027589 188 DKYCCPICSKSVIDMSRT 205 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~ 205 (221)
..|.|++|.+.+...+.+
T Consensus 8 k~~~C~~C~k~f~~~~~l 25 (36)
T 2elq_A 8 KPFKCSLCEYATRSKSNL 25 (36)
T ss_dssp CSEECSSSSCEESCHHHH
T ss_pred CCccCCCCCchhCCHHHH
Confidence 358899999999865443
No 179
>2xzm_6 RPS27E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_6
Probab=28.80 E-value=22 Score=25.75 Aligned_cols=36 Identities=17% Similarity=0.392 Sum_probs=26.0
Q ss_pred ceeecCCCCccccc------cccCCCCCCCcceeeccccccc
Q 027589 64 KQVICSVCDTEQPV------AQVCTNCGVNMGEYFCDICKFY 99 (221)
Q Consensus 64 ~~v~C~~C~~~q~~------~~~C~~Cg~~f~~y~C~~C~l~ 99 (221)
-.|.|..|..+|.+ ...|..||..+++-.=.+-+|-
T Consensus 31 m~VkCp~C~n~q~VFShA~t~V~C~~Cg~~L~~PTGGKA~l~ 72 (81)
T 2xzm_6 31 MDVKCAQCQNIQMIFSNAQSTIICEKCSAILCKPTGGKVQIQ 72 (81)
T ss_dssp EEEECSSSCCEEEEETTCSSCEECSSSCCEEEEECSSCEEEC
T ss_pred EEeECCCCCCeeEEEecCccEEEccCCCCEEeecCCCCeEec
Confidence 47899999999877 2468889888877654444443
No 180
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=28.64 E-value=32 Score=22.83 Aligned_cols=14 Identities=43% Similarity=1.196 Sum_probs=9.1
Q ss_pred cceeecccccc-ccC
Q 027589 88 MGEYFCDICKF-YDD 101 (221)
Q Consensus 88 f~~y~C~~C~l-~dd 101 (221)
|.+|.|.+|-+ ||.
T Consensus 1 m~~y~C~~CGyvYd~ 15 (55)
T 2v3b_B 1 MRKWQCVVCGFIYDE 15 (55)
T ss_dssp CCEEEETTTCCEEET
T ss_pred CCcEEeCCCCeEECC
Confidence 45788888854 443
No 181
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.49 E-value=23 Score=24.02 Aligned_cols=38 Identities=21% Similarity=0.395 Sum_probs=26.3
Q ss_pred CCCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 150 HHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
...|+.|.+.+.. +.+ .-=|..+|..|| +|-.|++.|.
T Consensus 15 ~~~C~~C~~~I~~--~~~--~a~~~~~H~~CF---------~C~~C~~~L~ 52 (79)
T 1x62_A 15 LPMCDKCGTGIVG--VFV--KLRDRHRHPECY---------VCTDCGTNLK 52 (79)
T ss_dssp CCCCSSSCCCCCS--SCE--ECSSCEECTTTT---------SCSSSCCCHH
T ss_pred CCccccCCCCccC--cEE--EECcceeCcCcC---------eeCCCCCCCC
Confidence 4568999988764 223 234788898876 5778888775
No 182
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=28.30 E-value=36 Score=22.54 Aligned_cols=10 Identities=20% Similarity=0.365 Sum_probs=5.2
Q ss_pred CCCCccchhh
Q 027589 150 HHHCPICYEY 159 (221)
Q Consensus 150 ~~~CpICle~ 159 (221)
+-.|+.|...
T Consensus 52 ~W~C~~C~~~ 61 (66)
T 2yt5_A 52 KWLCRQCVFA 61 (66)
T ss_dssp CCCCHHHHHT
T ss_pred CEECCCCcCc
Confidence 3456666543
No 183
>2cuq_A Four and A half LIM domains 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.16 E-value=30 Score=23.21 Aligned_cols=37 Identities=22% Similarity=0.493 Sum_probs=22.1
Q ss_pred CCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 151 HHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 151 ~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
..|+.|.+.+.. +.+ ..=|..+|..|| +|-.|+++|.
T Consensus 16 ~~C~~C~~~I~~--~~v--~a~~~~~H~~CF---------~C~~C~~~L~ 52 (80)
T 2cuq_A 16 PRCARCSKTLTQ--GGV--TYRDQPWHRECL---------VCTGCQTPLA 52 (80)
T ss_dssp CCCTTTCCCCCS--CCE--ESSSSEECTTTC---------BCSSSCCBCT
T ss_pred CcCCCCCCEecC--cEE--EECCchhhhhhC---------CcccCCCcCC
Confidence 467777777543 222 233677777654 5666777764
No 184
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=34.20 E-value=12 Score=19.14 Aligned_cols=16 Identities=25% Similarity=0.555 Sum_probs=11.8
Q ss_pred cCCCCCCcccccchhH
Q 027589 189 KYCCPICSKSVIDMSR 204 (221)
Q Consensus 189 ~~~CPiCrksi~dm~~ 204 (221)
.|.|++|.+++...+.
T Consensus 2 ~~~C~~C~k~f~~~~~ 17 (29)
T 2lvt_A 2 PCQCVMCGKAFTQASS 17 (29)
Confidence 3789999998875443
No 185
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=27.84 E-value=4.7 Score=27.87 Aligned_cols=49 Identities=18% Similarity=0.409 Sum_probs=30.1
Q ss_pred CCCCCCccchhhcccCCCceeeeccCCccCHHHHHHHHh--cCcCCCCCCccc
Q 027589 148 SMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIK--RDKYCCPICSKS 198 (221)
Q Consensus 148 ~~~~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~--~~~~~CPiCrks 198 (221)
.....| ||... .+...-+.--.|.-.||..|+..-.. ...|.||.|+++
T Consensus 17 ~~~~~C-iC~~~-~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~s 67 (68)
T 3o70_A 17 QGLVTC-FCMKP-FAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDS 67 (68)
T ss_dssp TTCCCS-TTCCC-CTTCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHTC
T ss_pred CCceEe-ECCCc-CCCCCEEECCCCCccccccccCcCcccCCCcEECCCCCCC
Confidence 334557 88765 22222233336899999999964321 146889988764
No 186
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=27.59 E-value=50 Score=19.68 Aligned_cols=20 Identities=15% Similarity=0.380 Sum_probs=14.9
Q ss_pred CcCCCCCCcccccchhHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWK 207 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~ 207 (221)
..+.||+|.+.+...+.+.+
T Consensus 31 ~~~~C~~C~~~f~~~~~l~~ 50 (57)
T 3uk3_C 31 KPYKCEFCEYAAAQKTSLRY 50 (57)
T ss_dssp CCEECSSSSCEESSHHHHHH
T ss_pred CCcCCCCCcchhCCHHHHHH
Confidence 46899999999887654443
No 187
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.50 E-value=38 Score=19.40 Aligned_cols=20 Identities=25% Similarity=0.514 Sum_probs=15.1
Q ss_pred CcCCCCCCcccccchhHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWK 207 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~ 207 (221)
..|.|++|.+++...+.+.+
T Consensus 11 k~~~C~~C~k~F~~~~~L~~ 30 (47)
T 2epx_A 11 KPYECIECGKAFIQNTSLIR 30 (47)
T ss_dssp CSBCCSSSCCCBSSHHHHHH
T ss_pred CCEECCccCchhCChHHHHH
Confidence 46899999999987654443
No 188
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=27.36 E-value=29 Score=18.52 Aligned_cols=18 Identities=17% Similarity=0.527 Sum_probs=13.8
Q ss_pred CcCCCCCCcccccchhHH
Q 027589 188 DKYCCPICSKSVIDMSRT 205 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~ 205 (221)
..|.|++|.+.+...+.+
T Consensus 6 k~~~C~~C~k~f~~~~~l 23 (35)
T 1srk_A 6 RPFVCRICLSAFTTKANC 23 (35)
T ss_dssp SCEECSSSCCEESSHHHH
T ss_pred cCeeCCCCCcccCCHHHH
Confidence 468999999999865443
No 189
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.32 E-value=40 Score=18.99 Aligned_cols=20 Identities=25% Similarity=0.398 Sum_probs=14.9
Q ss_pred CcCCCCCCcccccchhHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWK 207 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~ 207 (221)
..|.|++|.+.+...+.+.+
T Consensus 11 k~~~C~~C~k~f~~~~~L~~ 30 (44)
T 2en7_A 11 KPYVCNECGKAFRSKSYLII 30 (44)
T ss_dssp SSSCCTTTCCCCSSHHHHHH
T ss_pred cCeECCCCCCccCCHHHHHH
Confidence 46899999999987654433
No 190
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.31 E-value=30 Score=23.26 Aligned_cols=16 Identities=31% Similarity=0.851 Sum_probs=7.4
Q ss_pred CCCCCCCcceeeccccc
Q 027589 81 CTNCGVNMGEYFCDICK 97 (221)
Q Consensus 81 C~~Cg~~f~~y~C~~C~ 97 (221)
|.-|+. .++|.|+.|.
T Consensus 15 C~vC~~-~~kY~CPrC~ 30 (56)
T 2yqq_A 15 CVICLE-KPKYRCPACR 30 (56)
T ss_dssp CTTTCS-CCSEECTTTC
T ss_pred cCcCcC-CCeeeCCCCC
Confidence 444444 4444444444
No 191
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=33.28 E-value=13 Score=18.98 Aligned_cols=16 Identities=25% Similarity=0.623 Sum_probs=12.1
Q ss_pred cCCCCCCcccccchhH
Q 027589 189 KYCCPICSKSVIDMSR 204 (221)
Q Consensus 189 ~~~CPiCrksi~dm~~ 204 (221)
.|.|++|.+++...+.
T Consensus 3 ~~~C~~C~k~f~~~~~ 18 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGA 18 (30)
Confidence 4789999998876443
No 192
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=27.02 E-value=53 Score=24.17 Aligned_cols=48 Identities=15% Similarity=0.124 Sum_probs=32.5
Q ss_pred CCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCcccccc
Q 027589 152 HCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 201 (221)
Q Consensus 152 ~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~d 201 (221)
.|..|...|.+.. ..-...=|-.|...|+.+.+. ...+|-.|++.|..
T Consensus 34 ~C~~C~~~L~~~~-~~~~~~~g~~yC~~cy~~~f~-~~~~C~~C~~~I~~ 81 (122)
T 1m3v_A 34 KCSSCQAQLGDIG-TSSYTKSGMILCRNDYIRLFG-NSGAGGSGGHMGSG 81 (122)
T ss_dssp CCSSSCCCTTTSE-ECCEEETTEEECHHHHHHHHC-CCCSSSCSSCCSCC
T ss_pred CcCCCCCcccccC-CeEEEECCeeecHHHHHHHcC-CCCccccCCCCcCc
Confidence 6888887764211 112344577888999988764 23489999999975
No 193
>2iyb_E Testin, TESS, TES; LIM domain, SH3-binding, tumour supressor LIM domain EVH1 DO cell motility, phosphorylation, cytoskeleton; 2.35A {Homo sapiens}
Probab=26.70 E-value=18 Score=23.69 Aligned_cols=38 Identities=29% Similarity=0.632 Sum_probs=23.5
Q ss_pred CCccchhhcccCCCceeeeccCCccC--HHHHHHHHhcCcCCCCCCccccc
Q 027589 152 HCPICYEYLFDSLRNTTVMKCGHTMH--CECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 152 ~CpICle~lf~s~~~v~~L~CGH~~H--~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
.|+-|.+.+....+.+..+ |..+| ..|| +|-.|+++|.
T Consensus 4 ~C~~C~~~I~~~~~~v~a~--~~~wH~~~~CF---------~C~~C~~~L~ 43 (65)
T 2iyb_E 4 VCQGCHNAIDPEVQRVTYN--NFSWHASTECF---------LCSCCSKCLI 43 (65)
T ss_dssp ECTTTSSEECTTSCEEEET--TEEEETTTTTS---------BCTTTCCBCT
T ss_pred CCcCCCCeeccCceEEEEC--CCccCCCCCCE---------ECCCCCCcCC
Confidence 4777777765322333333 77888 7764 5667777775
No 194
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.69 E-value=40 Score=19.33 Aligned_cols=21 Identities=33% Similarity=0.588 Sum_probs=15.7
Q ss_pred CcCCCCCCcccccchhHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~ 208 (221)
..|.|++|.+++...+.+-+.
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2eoq_A 11 KPFKCDICGKSFCGRSRLNRH 31 (46)
T ss_dssp CSCCCSSSCCCCSSHHHHHHH
T ss_pred CCcCCCcCCchhCCHHHHHHH
Confidence 468999999999876554443
No 195
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.52 E-value=21 Score=23.46 Aligned_cols=36 Identities=22% Similarity=0.532 Sum_probs=16.8
Q ss_pred CCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 152 HCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 152 ~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
.|+.|.+.+.. +.+ ..=|..+|..|| +|-.|+++|.
T Consensus 7 ~C~~C~~~I~~--~~~--~a~~~~~H~~CF---------~C~~C~~~L~ 42 (70)
T 2d8z_A 7 GCVQCKKPITT--GGV--TYREQPWHKECF---------VCTACRKQLS 42 (70)
T ss_dssp BCSSSCCBCCS--SEE--ESSSSEEETTTS---------BCSSSCCBCT
T ss_pred CCcccCCeecc--ceE--EECccccCCCCC---------ccCCCCCcCC
Confidence 45555555432 112 222555665543 4555555553
No 196
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.34 E-value=28 Score=19.50 Aligned_cols=18 Identities=22% Similarity=0.506 Sum_probs=14.0
Q ss_pred CcCCCCCCcccccchhHH
Q 027589 188 DKYCCPICSKSVIDMSRT 205 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~ 205 (221)
..|.|++|.+++...+.+
T Consensus 10 k~~~C~~C~k~f~~~~~L 27 (42)
T 2ytb_A 10 KPYRCDQCGKAFSQKGSL 27 (42)
T ss_dssp CSBCCTTTTCCBSSHHHH
T ss_pred CCeeCCCccchhCCHHHH
Confidence 468999999999875443
No 197
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=26.28 E-value=42 Score=19.33 Aligned_cols=22 Identities=18% Similarity=0.409 Sum_probs=16.4
Q ss_pred CcCCCCCCcccccchhHHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKRI 209 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~l 209 (221)
..|.|++|.+++...+.+.+.+
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~ 32 (46)
T 2emk_A 11 KPYECKECGKAFSQTTHLIQHQ 32 (46)
T ss_dssp CSCBCSSSCCBCSCHHHHHHHH
T ss_pred CceECCCCCchhCCHHHHHHHH
Confidence 4689999999998765554443
No 198
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.18 E-value=42 Score=19.24 Aligned_cols=18 Identities=28% Similarity=0.493 Sum_probs=14.1
Q ss_pred CcCCCCCCcccccchhHH
Q 027589 188 DKYCCPICSKSVIDMSRT 205 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~ 205 (221)
..|.|++|.+++...+.+
T Consensus 11 k~~~C~~C~k~F~~~~~L 28 (46)
T 2enf_A 11 KPYKCNECGKVFTQNSHL 28 (46)
T ss_dssp CSCBCSSSCCBCSSHHHH
T ss_pred cCeECCCCCcccCCHHHH
Confidence 468999999999875443
No 199
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=26.11 E-value=40 Score=20.86 Aligned_cols=24 Identities=38% Similarity=0.823 Sum_probs=10.6
Q ss_pred eeccccccccCCCCcCeeeCCCCC
Q 027589 91 YFCDICKFYDDDIEKGQFHCDDCG 114 (221)
Q Consensus 91 y~C~~C~l~dd~~~k~~yHC~~Cg 114 (221)
-||+.|.-+--...|+-|.|..||
T Consensus 12 t~C~~C~~~l~g~~~qg~~C~~C~ 35 (50)
T 1ptq_A 12 TFCDHCGSLLWGLVKQGLKCEDCG 35 (50)
T ss_dssp CBCTTTCCBCCSSSSCEEEETTTC
T ss_pred CCcCCCCceeeccCCccCEeCCCC
Confidence 345555322112235556565555
No 200
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.01 E-value=31 Score=18.66 Aligned_cols=18 Identities=33% Similarity=0.778 Sum_probs=13.9
Q ss_pred CcCCCCCCcccccchhHH
Q 027589 188 DKYCCPICSKSVIDMSRT 205 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~ 205 (221)
..|.|++|.+++...+.+
T Consensus 8 k~~~C~~C~k~f~~~~~l 25 (37)
T 2elo_A 8 RSYSCPVCEKSFSEDRLI 25 (37)
T ss_dssp CCCEETTTTEECSSHHHH
T ss_pred CCcCCCCCCCccCCHHHH
Confidence 468999999999865443
No 201
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.81 E-value=34 Score=19.24 Aligned_cols=18 Identities=22% Similarity=0.574 Sum_probs=14.0
Q ss_pred CcCCCCCCcccccchhHH
Q 027589 188 DKYCCPICSKSVIDMSRT 205 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~ 205 (221)
..|.|++|.+++...+.+
T Consensus 10 k~~~C~~C~k~f~~~~~L 27 (42)
T 2eos_A 10 KPYPCEICGTRFRHLQTL 27 (42)
T ss_dssp CCBCCSSSCCCBSSHHHH
T ss_pred CCEECCCCCCccCCHHHH
Confidence 468999999999865443
No 202
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.79 E-value=43 Score=19.11 Aligned_cols=18 Identities=28% Similarity=0.578 Sum_probs=14.0
Q ss_pred CcCCCCCCcccccchhHH
Q 027589 188 DKYCCPICSKSVIDMSRT 205 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~ 205 (221)
..|.|++|.+++...+.+
T Consensus 11 k~~~C~~C~k~f~~~~~L 28 (46)
T 2ytr_A 11 KPYKCNECGKAFSQTSKL 28 (46)
T ss_dssp CTTCCTTTCCCCSSHHHH
T ss_pred cCcCCCCCCCccCCHHHH
Confidence 468999999999865443
No 203
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.79 E-value=44 Score=19.15 Aligned_cols=19 Identities=16% Similarity=0.459 Sum_probs=14.4
Q ss_pred CcCCCCCCcccccchhHHH
Q 027589 188 DKYCCPICSKSVIDMSRTW 206 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~ 206 (221)
..|.|++|.+.+...+.+.
T Consensus 11 k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2emg_A 11 NPFICSECGKVFTHKTNLI 29 (46)
T ss_dssp CSCBCTTTCCBCSSHHHHH
T ss_pred CCEECCccCcccCCHHHHH
Confidence 4689999999998654433
No 204
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.65 E-value=45 Score=19.06 Aligned_cols=19 Identities=26% Similarity=0.214 Sum_probs=14.5
Q ss_pred CcCCCCCCcccccchhHHH
Q 027589 188 DKYCCPICSKSVIDMSRTW 206 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~ 206 (221)
..|.|++|.+++...+.+.
T Consensus 11 ~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eop_A 11 KPHECRECGKSFSFNSQLI 29 (46)
T ss_dssp CSCBCTTTCCBCSSHHHHH
T ss_pred CCeeCCCCCchhCCHHHHH
Confidence 4689999999998765443
No 205
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.61 E-value=43 Score=19.25 Aligned_cols=21 Identities=24% Similarity=0.550 Sum_probs=15.5
Q ss_pred CcCCCCCCcccccchhHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~ 208 (221)
..|.|++|.+++...+.+.+.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2eoh_A 11 KPYECKECRKTFIQIGHLNQH 31 (46)
T ss_dssp CSCCCSSSCCCCSSHHHHHHH
T ss_pred CCcCCCCcCchhCCHHHHHHH
Confidence 468999999999876544433
No 206
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.58 E-value=44 Score=19.08 Aligned_cols=21 Identities=33% Similarity=0.409 Sum_probs=15.5
Q ss_pred CcCCCCCCcccccchhHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~ 208 (221)
..|.|++|.+++...+.+-+.
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2eov_A 11 KPYKCSDCGKSFTWKSRLRIH 31 (46)
T ss_dssp CSCBCSSSCCBCSSHHHHHHH
T ss_pred CCccCCccChhhCCHHHHHHH
Confidence 468999999999876544443
No 207
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=25.57 E-value=50 Score=22.73 Aligned_cols=51 Identities=24% Similarity=0.510 Sum_probs=32.0
Q ss_pred cCCCCCCCccchhhcccCCCceeee--ccCCccCHHHHHHH-HhcCcCCCCCCcc
Q 027589 146 ENSMHHHCPICYEYLFDSLRNTTVM--KCGHTMHCECYHEM-IKRDKYCCPICSK 197 (221)
Q Consensus 146 e~~~~~~CpICle~lf~s~~~v~~L--~CGH~~H~~C~~~~-l~~~~~~CPiCrk 197 (221)
+...+..|.||.+.-.+. ....++ .|.=.||..|+..- +-.....||.|..
T Consensus 12 ~~~~~~~C~vC~~~~s~~-~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~ 65 (71)
T 2ku3_A 12 LIDEDAVCSICMDGESQN-SNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQ 65 (71)
T ss_dssp CCCSSCSCSSSCCCCCCS-SSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCC-CCCEEECCCCCCccccccCCCCcCCCCCcCCccCcC
Confidence 345567899998752122 222333 68899999999742 2234677888764
No 208
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=25.50 E-value=33 Score=19.01 Aligned_cols=19 Identities=16% Similarity=0.462 Sum_probs=14.3
Q ss_pred CcCCCCCCcccccchhHHH
Q 027589 188 DKYCCPICSKSVIDMSRTW 206 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~ 206 (221)
..|.|++|.+.+...+.+.
T Consensus 5 k~~~C~~C~k~f~~~~~L~ 23 (39)
T 1njq_A 5 RSYTCSFCKREFRSAQALG 23 (39)
T ss_dssp SSEECTTTCCEESSHHHHH
T ss_pred CceECCCCCcccCCHHHHH
Confidence 3589999999998654433
No 209
>2dlo_A Thyroid receptor-interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.49 E-value=31 Score=23.38 Aligned_cols=37 Identities=24% Similarity=0.721 Sum_probs=21.7
Q ss_pred CCCccchhhcccCCCceeeeccCCccCHHHHHHHHhcCcCCCCCCccccc
Q 027589 151 HHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 200 (221)
Q Consensus 151 ~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l~~~~~~CPiCrksi~ 200 (221)
..|+.|.+.+.+ +.+. .=|..+|..|| +|..|+++|.
T Consensus 16 ~~C~~C~~~I~~--~~~~--a~~~~~H~~CF---------~C~~C~~~L~ 52 (81)
T 2dlo_A 16 EKCATCSQPILD--RILR--AMGKAYHPGCF---------TCVVCHRGLD 52 (81)
T ss_dssp CBCTTTCCBCCS--CCEE--ETTEEECTTTC---------BCSSSCCBCT
T ss_pred CccccCCCeecc--eeEE--ECCccccHHhc---------CcccCCCccC
Confidence 457777776542 2222 23667776654 5667777665
No 210
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.38 E-value=44 Score=19.16 Aligned_cols=18 Identities=28% Similarity=0.493 Sum_probs=14.0
Q ss_pred CcCCCCCCcccccchhHH
Q 027589 188 DKYCCPICSKSVIDMSRT 205 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~ 205 (221)
..|.|++|.+.+...+.+
T Consensus 11 k~~~C~~C~k~F~~~~~L 28 (46)
T 2yti_A 11 KPYKCNECGKVFTQNSHL 28 (46)
T ss_dssp CTTCCSSSCCCCSSHHHH
T ss_pred cCeECCCCCcccCChhHH
Confidence 468999999999865443
No 211
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=25.29 E-value=40 Score=20.96 Aligned_cols=26 Identities=19% Similarity=0.225 Sum_probs=19.1
Q ss_pred CcCCCCCCcccccchhHHHHHHHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKRIDEEVS 214 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~lD~~i~ 214 (221)
..++||.|++.|.. ...-+.+|=.+|
T Consensus 8 ~~~~C~~C~~~i~~-~~~~EH~D~H~A 33 (39)
T 2i5o_A 8 DQVPCEKCGSLVPV-WDMPEHMDYHFA 33 (39)
T ss_dssp CEEECTTTCCEEEG-GGHHHHHHHHHH
T ss_pred CCcccccccCcCCc-ccccchhhHHHH
Confidence 46899999999876 334677776655
No 212
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=25.16 E-value=33 Score=23.26 Aligned_cols=47 Identities=19% Similarity=0.340 Sum_probs=29.9
Q ss_pred CCCCccchhhcccCCCceeee-ccCCccCHHHHHHHHh---------cCcCCCCCCc
Q 027589 150 HHHCPICYEYLFDSLRNTTVM-KCGHTMHCECYHEMIK---------RDKYCCPICS 196 (221)
Q Consensus 150 ~~~CpICle~lf~s~~~v~~L-~CGH~~H~~C~~~~l~---------~~~~~CPiCr 196 (221)
...|++|.....+...-+.-- .|.-.||..|+.--.. ...+.||.|.
T Consensus 8 ~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 8 VYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp -CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred cCcCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 457999999865543333334 7889999999843211 1256787765
No 213
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.05 E-value=54 Score=18.60 Aligned_cols=21 Identities=19% Similarity=0.200 Sum_probs=15.2
Q ss_pred CcCCCCCCcccccchhHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~ 208 (221)
..|.|++|.+++...+.+-+.
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H 31 (44)
T 2eou_A 11 TTSECQECGKIFRHSSLLIEH 31 (44)
T ss_dssp CCCCCTTTCCCCSSHHHHHHH
T ss_pred cCeECCCCCcccCCHHHHHHH
Confidence 468999999999876544333
No 214
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.02 E-value=34 Score=18.58 Aligned_cols=20 Identities=20% Similarity=0.384 Sum_probs=14.6
Q ss_pred CcCCCCCCcccccch-hHHHH
Q 027589 188 DKYCCPICSKSVIDM-SRTWK 207 (221)
Q Consensus 188 ~~~~CPiCrksi~dm-~~~~~ 207 (221)
..|.|++|.+++... +.+.+
T Consensus 8 k~~~C~~C~k~f~~~~~~L~~ 28 (37)
T 2elp_A 8 RAMKCPYCDFYFMKNGSDLQR 28 (37)
T ss_dssp CCEECSSSSCEECSSCHHHHH
T ss_pred CCeECCCCChhhccCHHHHHH
Confidence 358999999998876 54433
No 215
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=24.79 E-value=34 Score=19.11 Aligned_cols=21 Identities=24% Similarity=0.381 Sum_probs=15.4
Q ss_pred CcCCCCCCcccccchhHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~ 208 (221)
..|.|++|.+++...+.+.+.
T Consensus 10 ~~~~C~~C~k~f~~~~~l~~H 30 (42)
T 2epc_A 10 TPYLCGQCGKSFTQRGSLAVH 30 (42)
T ss_dssp CCEECSSSCCEESSHHHHHHH
T ss_pred CCeECCCCCcccCCHHHHHHH
Confidence 468999999999876544333
No 216
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=24.78 E-value=7.8 Score=26.86 Aligned_cols=47 Identities=21% Similarity=0.453 Sum_probs=29.0
Q ss_pred CCCccchhhcccCCCceeeeccCCccCHHHHHHHH--------hcCcCCCCCCcccc
Q 027589 151 HHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMI--------KRDKYCCPICSKSV 199 (221)
Q Consensus 151 ~~CpICle~lf~s~~~v~~L~CGH~~H~~C~~~~l--------~~~~~~CPiCrksi 199 (221)
.-| ||.... +...-+.--.|.-.||..|+..-. ....|.||.|++.-
T Consensus 17 ~~C-~C~~~~-~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~ 71 (76)
T 1wem_A 17 LYC-ICRQPH-NNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILS 71 (76)
T ss_dssp CCS-TTCCCC-CSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHS
T ss_pred CEE-ECCCcc-CCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCcc
Confidence 446 787753 222222223688999999985221 12479999998643
No 217
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.66 E-value=47 Score=19.07 Aligned_cols=21 Identities=24% Similarity=0.387 Sum_probs=14.5
Q ss_pred CcCCCCCCcccccchhHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~ 208 (221)
..|.|++|.+++...+.+-+.
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H 31 (46)
T 2eoo_A 11 RPYGCNECGKNFGRHSHLIEH 31 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHH
T ss_pred CCEEccccCcccCCHHHHHHH
Confidence 357889998888866554433
No 218
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.50 E-value=37 Score=19.66 Aligned_cols=19 Identities=26% Similarity=0.489 Sum_probs=14.4
Q ss_pred CcCCCCCCcccccchhHHH
Q 027589 188 DKYCCPICSKSVIDMSRTW 206 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~ 206 (221)
..|.|++|.+++...+.+.
T Consensus 11 k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eon_A 11 KPYKCQVCGKAFRVSSHLV 29 (46)
T ss_dssp CSCBCSSSCCBCSSHHHHH
T ss_pred cccCCCCCCcccCcHHHHH
Confidence 4689999999998764433
No 219
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.12 E-value=49 Score=18.92 Aligned_cols=19 Identities=21% Similarity=0.302 Sum_probs=14.4
Q ss_pred CcCCCCCCcccccchhHHH
Q 027589 188 DKYCCPICSKSVIDMSRTW 206 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~ 206 (221)
..|.|++|.+++...+.+-
T Consensus 11 k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2epz_A 11 KPFDCIDCGKAFSDHIGLN 29 (46)
T ss_dssp CSBCCTTTCCCBSSHHHHH
T ss_pred CCeECCCCCceeCCHHHHH
Confidence 4689999999998654433
No 220
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.10 E-value=35 Score=19.62 Aligned_cols=19 Identities=26% Similarity=0.328 Sum_probs=14.5
Q ss_pred CcCCCCCCcccccchhHHH
Q 027589 188 DKYCCPICSKSVIDMSRTW 206 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~ 206 (221)
..|.|++|.+++...+.+-
T Consensus 11 k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ene_A 11 KPYKCNECGKVFRHNSYLS 29 (46)
T ss_dssp SSEECSSSCCEESSHHHHH
T ss_pred CCeECCCCCchhCChHHHH
Confidence 4689999999998765433
No 221
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=24.03 E-value=46 Score=19.13 Aligned_cols=21 Identities=19% Similarity=0.265 Sum_probs=15.7
Q ss_pred CcCCCCCCcccccchhHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~ 208 (221)
..+.|++|.+++...+.+.+.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2ely_A 11 KPFKCVECGKGFSRRSALNVH 31 (46)
T ss_dssp CSBCCSSSCCCBSSTTHHHHH
T ss_pred CCcccCccCcccCCHHHHHHH
Confidence 468999999999876554444
No 222
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.01 E-value=32 Score=23.04 Aligned_cols=8 Identities=25% Similarity=0.580 Sum_probs=3.5
Q ss_pred CCccCHHH
Q 027589 173 GHTMHCEC 180 (221)
Q Consensus 173 GH~~H~~C 180 (221)
|..+|..|
T Consensus 24 ~~~wH~~C 31 (73)
T 1wig_A 24 EKHYHPSC 31 (73)
T ss_dssp SCCBCTTT
T ss_pred CCCCCCCc
Confidence 34444443
No 223
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.93 E-value=50 Score=18.95 Aligned_cols=20 Identities=20% Similarity=0.325 Sum_probs=15.0
Q ss_pred CcCCCCCCcccccchhHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWK 207 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~ 207 (221)
..|.|++|.+++...+.+-+
T Consensus 11 k~~~C~~C~k~F~~~~~L~~ 30 (46)
T 2en9_A 11 KLFKCNECKKTFTQSSSLTV 30 (46)
T ss_dssp CCCBCTTTCCBCSSHHHHHH
T ss_pred CCEECCccCcccCCHHHHHH
Confidence 46899999999987654433
No 224
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.91 E-value=42 Score=19.26 Aligned_cols=19 Identities=26% Similarity=0.492 Sum_probs=14.5
Q ss_pred CcCCCCCCcccccchhHHH
Q 027589 188 DKYCCPICSKSVIDMSRTW 206 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~ 206 (221)
..|.|++|.+++...+.+.
T Consensus 11 k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eq2_A 11 KPYQCNECGKAFSQTSKLA 29 (46)
T ss_dssp CSSSCCSSCCCCSSHHHHH
T ss_pred CCeECCCCCcccCCHHHHH
Confidence 4689999999998765433
No 225
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.83 E-value=50 Score=18.97 Aligned_cols=19 Identities=26% Similarity=0.501 Sum_probs=14.4
Q ss_pred CcCCCCCCcccccchhHHH
Q 027589 188 DKYCCPICSKSVIDMSRTW 206 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~ 206 (221)
..|.|++|.+++...+.+-
T Consensus 11 k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em6_A 11 KCYKCDVCGKEFSQSSHLQ 29 (46)
T ss_dssp CCCBCSSSCCBCSSHHHHH
T ss_pred CCeECCCCCcccCCHHHHH
Confidence 4689999999998664433
No 226
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=23.82 E-value=49 Score=19.74 Aligned_cols=15 Identities=27% Similarity=0.475 Sum_probs=8.6
Q ss_pred CCCCCCcccccchhH
Q 027589 190 YCCPICSKSVIDMSR 204 (221)
Q Consensus 190 ~~CPiCrksi~dm~~ 204 (221)
|.|++|.+.+...+.
T Consensus 2 ~~C~~C~~~f~~~~~ 16 (57)
T 1bbo_A 2 YICEECGIRXKKPSM 16 (57)
T ss_dssp CBCTTTCCBCSSHHH
T ss_pred CcCCCCcCcCCCHHH
Confidence 456666666655443
No 227
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.78 E-value=62 Score=18.50 Aligned_cols=18 Identities=33% Similarity=0.562 Sum_probs=12.3
Q ss_pred CcCCCCCCcccccchhHH
Q 027589 188 DKYCCPICSKSVIDMSRT 205 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~ 205 (221)
..|.|++|.+++...+.+
T Consensus 11 k~~~C~~C~k~f~~~~~L 28 (46)
T 2ytt_A 11 KPYQCSECGKSFSGSYRL 28 (46)
T ss_dssp CTTCCSSSCCCCSSHHHH
T ss_pred CCeeCCCCCcccCCHHHH
Confidence 357888888887765443
No 228
>4esj_A Type-2 restriction enzyme DPNI; restriction endonuclease-DNA complex, type IIM, type IIE, RE enzyme, DPNI; HET: DNA 6MA; 2.05A {Streptococcus pneumoniae}
Probab=23.70 E-value=35 Score=29.67 Aligned_cols=19 Identities=32% Similarity=1.184 Sum_probs=11.6
Q ss_pred ccCCCCCC----------Ccceeeccccc
Q 027589 79 QVCTNCGV----------NMGEYFCDICK 97 (221)
Q Consensus 79 ~~C~~Cg~----------~f~~y~C~~C~ 97 (221)
..||+||. +.|..||+.|+
T Consensus 35 ~yCPnCG~~~l~~f~nN~PVaDF~C~~C~ 63 (257)
T 4esj_A 35 SYCPNCGNNPLNHFENNRPVADFYCNHCS 63 (257)
T ss_dssp CCCTTTCCSSCEEC----CCCEEECTTTC
T ss_pred CcCCCCCChhhhhccCCCcccccccCCcc
Confidence 36777777 34555666664
No 229
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.70 E-value=49 Score=18.93 Aligned_cols=21 Identities=24% Similarity=0.382 Sum_probs=14.1
Q ss_pred CcCCCCCCcccccchhHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~ 208 (221)
..|.|++|.+++...+.+-+.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2emp_A 11 KPYMCNECGKAFSVYSSLTTH 31 (46)
T ss_dssp CSEECSSSCCEESCHHHHHHH
T ss_pred cCeECCCCCchhCCHHHHHHH
Confidence 357888888888765544433
No 230
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.64 E-value=50 Score=18.81 Aligned_cols=21 Identities=29% Similarity=0.531 Sum_probs=14.9
Q ss_pred CcCCCCCCcccccchhHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~ 208 (221)
..|.|++|.+.+...+.+-+.
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2eor_A 11 KPYNCEECGKAFIHDSQLQEH 31 (46)
T ss_dssp CSEECTTTCCEESSHHHHHHH
T ss_pred cCccCCCCCCCcCCHHHHHHH
Confidence 458899999998866554433
No 231
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.54 E-value=36 Score=19.61 Aligned_cols=21 Identities=14% Similarity=0.205 Sum_probs=15.4
Q ss_pred CcCCCCCCcccccchhHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~ 208 (221)
..|.|++|.+++...+.+.+.
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2em5_A 11 KSHQCHECGRGFTLKSHLNQH 31 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHH
T ss_pred CCeECCcCCCccCCHHHHHHH
Confidence 468999999999876554433
No 232
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=23.40 E-value=39 Score=24.27 Aligned_cols=10 Identities=30% Similarity=0.893 Sum_probs=5.6
Q ss_pred ceeecCccCc
Q 027589 123 NYFHCKRCGS 132 (221)
Q Consensus 123 ~~fHC~~C~~ 132 (221)
-+++|..|+.
T Consensus 60 ~~Y~C~~C~f 69 (89)
T 1v5n_A 60 WSYHCDECDF 69 (89)
T ss_dssp CEEECTTTCC
T ss_pred cEEEcCCCCC
Confidence 4566666553
No 233
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.38 E-value=51 Score=18.91 Aligned_cols=17 Identities=29% Similarity=0.567 Sum_probs=13.6
Q ss_pred CcCCCCCCcccccchhH
Q 027589 188 DKYCCPICSKSVIDMSR 204 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~ 204 (221)
..|.|++|.+++...+.
T Consensus 11 k~~~C~~C~k~f~~~~~ 27 (46)
T 2ytq_A 11 KPYGCSECGKAFSSKSY 27 (46)
T ss_dssp CSCBCSSSCCBCSCHHH
T ss_pred CCcCCCccChhhCChHH
Confidence 46899999999986544
No 234
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.24 E-value=52 Score=18.75 Aligned_cols=19 Identities=37% Similarity=0.613 Sum_probs=14.4
Q ss_pred CcCCCCCCcccccchhHHH
Q 027589 188 DKYCCPICSKSVIDMSRTW 206 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~ 206 (221)
..|.|++|.+++...+.+.
T Consensus 11 k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ep1_A 11 KPYECSDCGKSFIKKSQLH 29 (46)
T ss_dssp CSSCCSSSCCCCSSHHHHH
T ss_pred CCcCCCCCCchhCCHHHHH
Confidence 4689999999998654433
No 235
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.20 E-value=37 Score=19.42 Aligned_cols=19 Identities=26% Similarity=0.361 Sum_probs=14.4
Q ss_pred CcCCCCCCcccccchhHHH
Q 027589 188 DKYCCPICSKSVIDMSRTW 206 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~ 206 (221)
..|.|++|.+.+...+.+.
T Consensus 11 k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eq3_A 11 KPYECNQCGKAFSVRSSLT 29 (46)
T ss_dssp CSSEETTTTEECSSHHHHH
T ss_pred CCeECCCCChhhCCHHHHH
Confidence 4689999999998765433
No 236
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.10 E-value=53 Score=18.77 Aligned_cols=20 Identities=35% Similarity=0.697 Sum_probs=13.5
Q ss_pred CcCCCCCCcccccchhHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWK 207 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~ 207 (221)
..|.|++|.+++...+.+-+
T Consensus 11 k~~~C~~C~k~F~~~~~L~~ 30 (46)
T 2emh_A 11 RPYICTVCGKAFTDRSNLIK 30 (46)
T ss_dssp CSEECTTTCCEESSHHHHHH
T ss_pred CCcCCCCCCchhCCHHHHHH
Confidence 35788888888876544433
No 237
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.09 E-value=52 Score=18.80 Aligned_cols=18 Identities=28% Similarity=0.488 Sum_probs=14.0
Q ss_pred CcCCCCCCcccccchhHH
Q 027589 188 DKYCCPICSKSVIDMSRT 205 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~ 205 (221)
..|.|++|.+++...+.+
T Consensus 11 k~~~C~~C~k~f~~~~~L 28 (46)
T 2eq1_A 11 KPYKCNECGKAFRAHSNL 28 (46)
T ss_dssp CCCCCTTTTCCCSSHHHH
T ss_pred CCeECCcCChhhCCHHHH
Confidence 468999999999865443
No 238
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.07 E-value=51 Score=18.92 Aligned_cols=20 Identities=20% Similarity=0.169 Sum_probs=13.5
Q ss_pred CcCCCCCCcccccchhHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWK 207 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~ 207 (221)
..|.|++|.+++...+.+-+
T Consensus 11 k~~~C~~C~k~f~~~~~L~~ 30 (46)
T 2em8_A 11 KPYKCVECGKGYKRRLDLDF 30 (46)
T ss_dssp CSEECSSSCCEESSHHHHHH
T ss_pred CCeECcccCchhCCHHHHHH
Confidence 35788888888876544333
No 239
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=23.00 E-value=75 Score=20.69 Aligned_cols=23 Identities=35% Similarity=0.996 Sum_probs=14.2
Q ss_pred CCCCcceeCCccceeecCccCcccc
Q 027589 111 DDCGICRIGGRENYFHCKRCGSCYS 135 (221)
Q Consensus 111 ~~CgiCR~G~~~~~fHC~~C~~C~s 135 (221)
+.|.+|+.+| +..-|+.|..-+-
T Consensus 6 ~~C~vC~~~g--~ll~Cd~C~~~fH 28 (60)
T 2puy_A 6 DFCSVCRKSG--QLLMCDTCSRVYH 28 (60)
T ss_dssp SSCTTTCCCS--SCEECSSSSCEEC
T ss_pred CCCcCCCCCC--cEEEcCCCCcCEE
Confidence 3466776654 5677777765443
No 240
>3u6p_A Formamidopyrimidine-DNA glycosylase; DNA glycosylase, DNA repair, sequence context; HET: DNA 08Q; 1.60A {Geobacillus stearothermophilus} PDB: 3u6d_A* 3u6c_A* 3u6l_A* 3u6m_A* 3u6o_A* 3u6e_A* 3u6q_A* 3u6s_A* 3gp1_A* 3sbj_A* 2f5q_A* 2f5s_A* 3gq4_A* 3gpy_A* 2f5n_A 2f5o_A 2f5p_A 3sau_A* 3sar_A* 3sav_A* ...
Probab=22.99 E-value=36 Score=29.28 Aligned_cols=19 Identities=32% Similarity=1.057 Sum_probs=13.8
Q ss_pred cccCCCCCCCc--------ceeecccc
Q 027589 78 AQVCTNCGVNM--------GEYFCDIC 96 (221)
Q Consensus 78 ~~~C~~Cg~~f--------~~y~C~~C 96 (221)
++.|+.||..+ +.|||+.|
T Consensus 245 g~pC~~CG~~I~~~~~~gR~t~~CP~C 271 (273)
T 3u6p_A 245 GNPCKRCGTPIEKTVVAGRGTHYCPRC 271 (273)
T ss_dssp TSBCTTTCCBCEEEEETTEEEEECTTT
T ss_pred cCCCCCCCCeEEEEEECCCCeEECCCC
Confidence 35799999887 45666666
No 241
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.94 E-value=63 Score=18.43 Aligned_cols=21 Identities=14% Similarity=0.317 Sum_probs=14.9
Q ss_pred CcCCCCCCcccccchhHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~ 208 (221)
..|.|++|.+.+...+.+-+.
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H 31 (46)
T 2en3_A 11 KPFQCKECGMNFSWSCSLFKH 31 (46)
T ss_dssp CSEECSSSCCEESSSHHHHHH
T ss_pred CCeeCcccChhhCCHHHHHHH
Confidence 358899999998865554433
No 242
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.80 E-value=54 Score=18.67 Aligned_cols=20 Identities=30% Similarity=0.444 Sum_probs=14.9
Q ss_pred CcCCCCCCcccccchhHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWK 207 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~ 207 (221)
..|.|++|.+++...+.+-+
T Consensus 11 k~~~C~~C~k~f~~~~~L~~ 30 (46)
T 2eq4_A 11 KLYNCKECGKSFSRAPCLLK 30 (46)
T ss_dssp CCCCBTTTTBCCSCHHHHHH
T ss_pred CCeECCCCCCccCchHHHHH
Confidence 46899999999987654433
No 243
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.72 E-value=38 Score=19.15 Aligned_cols=18 Identities=22% Similarity=0.436 Sum_probs=13.9
Q ss_pred CcCCCCCCcccccchhHH
Q 027589 188 DKYCCPICSKSVIDMSRT 205 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~ 205 (221)
..|.|++|.+++...+.+
T Consensus 11 k~~~C~~C~k~f~~~~~L 28 (44)
T 2eoj_A 11 NPYECCECGKVFSRKDQL 28 (44)
T ss_dssp CSCEETTTTEECSSHHHH
T ss_pred cCeeCCCCCCccCCHHHH
Confidence 468999999999865443
No 244
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.57 E-value=54 Score=18.88 Aligned_cols=20 Identities=20% Similarity=0.297 Sum_probs=14.9
Q ss_pred CcCCCCCCcccccchhHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWK 207 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~ 207 (221)
..|.|++|.+.+...+.+-+
T Consensus 11 k~~~C~~C~k~F~~~~~L~~ 30 (46)
T 2eom_A 11 RGHRCSDCGKFFLQASNFIQ 30 (46)
T ss_dssp SSCCCSSSCCCCSSHHHHHH
T ss_pred CCcCCCCCCCeeCChHHHHH
Confidence 46899999999986554433
No 245
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=22.46 E-value=53 Score=22.58 Aligned_cols=22 Identities=23% Similarity=0.702 Sum_probs=11.7
Q ss_pred eeccccccccCCCCcCeeeCCCCCc
Q 027589 91 YFCDICKFYDDDIEKGQFHCDDCGI 115 (221)
Q Consensus 91 y~C~~C~l~dd~~~k~~yHC~~Cgi 115 (221)
-||+.|.-+- .++-|.|..||+
T Consensus 36 t~C~~C~~~l---~~qG~kC~~C~~ 57 (72)
T 2fnf_X 36 GWCDLCGREV---LRQALRCANCKF 57 (72)
T ss_dssp CBCTTTSSBC---SSCCEECTTSSC
T ss_pred cchhhhhHHH---HhCcCccCCCCC
Confidence 3455554332 355666666664
No 246
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=22.40 E-value=11 Score=26.38 Aligned_cols=51 Identities=18% Similarity=0.393 Sum_probs=31.3
Q ss_pred CCCCCccchhhcccCCCceeee--ccCCccCHHHHHHHHh--------cCcCCCCCCcccccc
Q 027589 149 MHHHCPICYEYLFDSLRNTTVM--KCGHTMHCECYHEMIK--------RDKYCCPICSKSVID 201 (221)
Q Consensus 149 ~~~~CpICle~lf~s~~~v~~L--~CGH~~H~~C~~~~l~--------~~~~~CPiCrksi~d 201 (221)
....| ||... .+...-+.-= .|.-.||..|+.--.. ...|.||.|+....+
T Consensus 15 ~~~~C-iC~~~-~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~~~ 75 (78)
T 1wew_A 15 IKVRC-VCGNS-LETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTSGP 75 (78)
T ss_dssp CCCCC-SSCCC-CCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCCSC
T ss_pred CCEEe-ECCCc-CCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCcccCC
Confidence 34457 78875 2222222222 6899999999963221 137999999876543
No 247
>2xzf_A Formamidopyrimidine-DNA glycosylase; hydrolase-DNA complex; HET: VET; 1.80A {Lactococcus lactis subsp} PDB: 1pm5_A* 1xc8_A* 1pji_A* 2xzu_A* 3c58_A* 1tdz_A* 1nnj_A 1kfv_A 1pjj_A*
Probab=22.35 E-value=38 Score=29.04 Aligned_cols=20 Identities=35% Similarity=1.225 Sum_probs=14.5
Q ss_pred cccCCCCCCCc--------ceeeccccc
Q 027589 78 AQVCTNCGVNM--------GEYFCDICK 97 (221)
Q Consensus 78 ~~~C~~Cg~~f--------~~y~C~~C~ 97 (221)
++.|+.||..+ +.|||+.|.
T Consensus 242 G~pC~~CG~~I~~~~~~gR~t~~CP~CQ 269 (271)
T 2xzf_A 242 GEKCSRCGAEIQKIKVAGRGTHFCPVCQ 269 (271)
T ss_dssp TSBCTTTCCBCEEEEETTEEEEECTTTS
T ss_pred CCCCCCCCCEeeEEEECCCceEECCCCC
Confidence 35799999887 566777663
No 248
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=22.29 E-value=24 Score=25.75 Aligned_cols=32 Identities=28% Similarity=0.569 Sum_probs=23.4
Q ss_pred ccCCccCHHHHHHHHhc--CcCCCCCCcccccch
Q 027589 171 KCGHTMHCECYHEMIKR--DKYCCPICSKSVIDM 202 (221)
Q Consensus 171 ~CGH~~H~~C~~~~l~~--~~~~CPiCrksi~dm 202 (221)
.|.-.||..|+..=+.. ..+.||.|+..-.+.
T Consensus 47 ~C~~w~H~~C~~~~~~~~p~~w~C~~C~~~~~~~ 80 (98)
T 2lv9_A 47 KCSVWQHIDCMGIDRQHIPDTYLCERCQPRNLDK 80 (98)
T ss_dssp TTCBEEETTTTTCCTTSCCSSBCCTTTSSSCCCH
T ss_pred CCCCcCcCcCCCCCccCCCCCEECCCCcCCCCCH
Confidence 57899999999653221 368999998665554
No 249
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.28 E-value=47 Score=19.04 Aligned_cols=21 Identities=19% Similarity=0.384 Sum_probs=14.0
Q ss_pred CcCCCCCCcccccchhHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~ 208 (221)
..|.|++|.+++...+.+.+.
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H 31 (46)
T 2emy_A 11 NPYECHECGKAFSRKYQLISH 31 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHH
T ss_pred cCcCCCCCCcccCcHHHHHHH
Confidence 357888888888765544333
No 250
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=22.27 E-value=53 Score=22.42 Aligned_cols=22 Identities=27% Similarity=0.839 Sum_probs=14.3
Q ss_pred cCCCCCCCcceeeccccccccCCCCcCeeeCCCCC
Q 027589 80 VCTNCGVNMGEYFCDICKFYDDDIEKGQFHCDDCG 114 (221)
Q Consensus 80 ~C~~Cg~~f~~y~C~~C~l~dd~~~k~~yHC~~Cg 114 (221)
.|..|+..|+- | +...||-.||
T Consensus 13 ~C~~C~~~F~~--------~-----~RrHHCR~CG 34 (73)
T 1vfy_A 13 ACMICSKKFSL--------L-----NRKHHCRSCG 34 (73)
T ss_dssp BCTTTCCBCBT--------T-----BCCEECTTTC
T ss_pred cccCCCCccCC--------c-----cccccCCCCC
Confidence 57777777752 2 4567777766
No 251
>1k3x_A Endonuclease VIII; hydrolase/DNA, hydrolase-DNA complex; HET: BRU PED; 1.25A {Escherichia coli} SCOP: a.156.1.2 b.113.1.1 g.39.1.8 PDB: 1k3w_A* 1q39_A 2ea0_A* 2oq4_A* 1q3c_A 2opf_A* 1q3b_A*
Probab=22.26 E-value=39 Score=28.87 Aligned_cols=18 Identities=33% Similarity=0.964 Sum_probs=13.4
Q ss_pred ccCCCCCCCc--------ceeecccc
Q 027589 79 QVCTNCGVNM--------GEYFCDIC 96 (221)
Q Consensus 79 ~~C~~Cg~~f--------~~y~C~~C 96 (221)
+.|+.||..+ +.|||+.|
T Consensus 235 ~pC~~CG~~I~~~~~~gR~t~~CP~C 260 (262)
T 1k3x_A 235 EPCERCGSIIEKTTLSSRPFYWCPGC 260 (262)
T ss_dssp SBCTTTCCBCEEEEETTEEEEECTTT
T ss_pred CCCCCCCCEeEEEEECCCCeEECCCC
Confidence 5799998887 55677666
No 252
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=22.12 E-value=45 Score=19.09 Aligned_cols=20 Identities=15% Similarity=0.268 Sum_probs=14.9
Q ss_pred CcCCCCCCcccccchhHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWK 207 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~ 207 (221)
..|.|++|.+++...+.+.+
T Consensus 11 k~~~C~~C~k~F~~~~~L~~ 30 (46)
T 2em0_A 11 KTWKCRECDMCFSQASSLRL 30 (46)
T ss_dssp CCCCCSSSCCCCSSHHHHHH
T ss_pred cCeECCCCCcccCCHHHHHH
Confidence 46899999999987654433
No 253
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.09 E-value=41 Score=19.32 Aligned_cols=21 Identities=33% Similarity=0.588 Sum_probs=15.5
Q ss_pred CcCCCCCCcccccchhHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~ 208 (221)
..|.|++|.+++...+.+.+.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2ep2_A 11 KPYECSICGKSFTKKSQLHVH 31 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHH
T ss_pred cCcCCCCCCcccCCHHHHHHH
Confidence 468999999999876554443
No 254
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=22.05 E-value=45 Score=22.89 Aligned_cols=10 Identities=30% Similarity=0.969 Sum_probs=5.9
Q ss_pred CeeeCCCCCc
Q 027589 106 GQFHCDDCGI 115 (221)
Q Consensus 106 ~~yHC~~Cgi 115 (221)
.+..|+.||-
T Consensus 37 ~~iRC~~CG~ 46 (63)
T 3h0g_L 37 EVIRCRECGH 46 (63)
T ss_dssp SCCCCSSSCC
T ss_pred CceECCCCCc
Confidence 4556666663
No 255
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=21.99 E-value=41 Score=19.82 Aligned_cols=20 Identities=15% Similarity=0.277 Sum_probs=15.3
Q ss_pred CcCCCCCCcccccchhHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWK 207 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~ 207 (221)
.-|.|+.|.|++...+...+
T Consensus 7 kp~~C~~CgK~F~~~s~L~~ 26 (36)
T 1fv5_A 7 ARFMCLPCGIAFSSPSTLEA 26 (36)
T ss_dssp CCCEETTTTEECSCHHHHHH
T ss_pred cCeECCCCCCccCCHhHccC
Confidence 46899999999987655443
No 256
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=21.96 E-value=1.2e+02 Score=20.63 Aligned_cols=24 Identities=17% Similarity=0.642 Sum_probs=14.3
Q ss_pred CCCcceeCC-ccceeecCccCcccc
Q 027589 112 DCGICRIGG-RENYFHCKRCGSCYS 135 (221)
Q Consensus 112 ~CgiCR~G~-~~~~fHC~~C~~C~s 135 (221)
.|.||+.+. ..+..-|+.|..-+-
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH 44 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFH 44 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEE
T ss_pred CCcCCCCcCCCCCEEEcCCCCCcee
Confidence 345555442 457788888865443
No 257
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.95 E-value=41 Score=19.23 Aligned_cols=20 Identities=20% Similarity=0.348 Sum_probs=14.9
Q ss_pred CcCCCCCCcccccchhHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWK 207 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~ 207 (221)
..|.|++|.+++...+.+-+
T Consensus 11 k~~~C~~C~k~f~~~~~L~~ 30 (46)
T 2ytf_A 11 KPFECSECQKAFNTKSNLIV 30 (46)
T ss_dssp CSEECSSSCCEESSHHHHHH
T ss_pred CCcCCCCCCcccCCHHHHHH
Confidence 46899999999987654433
No 258
>1k82_A Formamidopyrimidine-DNA glycosylase; protein-DNA complex, DNA repair, beta sandwich, zinc finger, helix two-turns helix, hydrolase/DNA complex; HET: PED; 2.10A {Escherichia coli} SCOP: a.156.1.2 b.113.1.1 g.39.1.8
Probab=21.85 E-value=40 Score=28.93 Aligned_cols=19 Identities=26% Similarity=1.062 Sum_probs=14.0
Q ss_pred cccCCCCCCCc--------ceeecccc
Q 027589 78 AQVCTNCGVNM--------GEYFCDIC 96 (221)
Q Consensus 78 ~~~C~~Cg~~f--------~~y~C~~C 96 (221)
++.|+.||... +.|||+.|
T Consensus 240 g~pC~~CG~~I~~~~~~gR~t~~CP~C 266 (268)
T 1k82_A 240 GEPCRVCGTPIVATKHAQRATFYCRQC 266 (268)
T ss_dssp TSBCTTTCCBCEEEEETTEEEEECTTT
T ss_pred CCCCCCCCCEeeEEEECCCceEECCCC
Confidence 35799999887 55667666
No 259
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.79 E-value=41 Score=19.27 Aligned_cols=18 Identities=33% Similarity=0.645 Sum_probs=14.0
Q ss_pred CcCCCCCCcccccchhHH
Q 027589 188 DKYCCPICSKSVIDMSRT 205 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~ 205 (221)
..|.|++|.+++...+.+
T Consensus 11 ~~~~C~~C~k~F~~~~~L 28 (46)
T 2emi_A 11 RHYECSECGKAFIQKSTL 28 (46)
T ss_dssp CCEECSSSCCEESSHHHH
T ss_pred CCCCCCCCCcccCCHHHH
Confidence 468999999999865443
No 260
>1ee8_A MUTM (FPG) protein; beta sandwich, zinc finger, helix two-turns helix, riken STR genomics/proteomics initiative, RSGI, structural genomics; 1.90A {Thermus thermophilus} SCOP: a.156.1.2 b.113.1.1 g.39.1.8
Probab=21.71 E-value=40 Score=28.90 Aligned_cols=20 Identities=35% Similarity=0.994 Sum_probs=14.2
Q ss_pred cccCCCCCCCc--------ceeeccccc
Q 027589 78 AQVCTNCGVNM--------GEYFCDICK 97 (221)
Q Consensus 78 ~~~C~~Cg~~f--------~~y~C~~C~ 97 (221)
++.|+.||... +.|||+.|.
T Consensus 235 g~pC~~CG~~I~~~~~~gR~t~~CP~CQ 262 (266)
T 1ee8_A 235 GLPCPACGRPVERRVVAGRGTHFCPTCQ 262 (266)
T ss_dssp TSBCTTTCCBCEEEESSSCEEEECTTTT
T ss_pred CCCCCCCCCEeeEEEECCCceEECCCCC
Confidence 35799998887 556666664
No 261
>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor, cysteine-rich module, calcium; 1.70A {Homo sapiens} SCOP: g.12.1.1
Probab=21.69 E-value=57 Score=19.33 Aligned_cols=31 Identities=32% Similarity=0.679 Sum_probs=16.9
Q ss_pred ceeecCccCcccccccc--CcceeecCCCCCCCc
Q 027589 123 NYFHCKRCGSCYSTSLR--NNHLCIENSMHHHCP 154 (221)
Q Consensus 123 ~~fHC~~C~~C~s~~~~--~~H~C~e~~~~~~Cp 154 (221)
+.|.|.. |.|++.... +..-|..++-+.+||
T Consensus 5 ~~f~C~~-g~Ci~~~~~CDg~~DC~DgsDE~~C~ 37 (37)
T 1ajj_A 5 FEFHCLS-GECIHSSWRCDGGPDCKDKSDEENCA 37 (37)
T ss_dssp TCEECTT-SCEECGGGTTSSSCCSTTCGGGTTCC
T ss_pred CceEcCC-CCeechhhccCCCCCCCCCccccCCC
Confidence 4566765 677776543 334444445444553
No 262
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=21.68 E-value=56 Score=21.34 Aligned_cols=12 Identities=33% Similarity=1.027 Sum_probs=8.2
Q ss_pred cceeeccccccc
Q 027589 88 MGEYFCDICKFY 99 (221)
Q Consensus 88 f~~y~C~~C~l~ 99 (221)
|.+|.|.+|-+.
T Consensus 1 m~~y~C~~CGyv 12 (52)
T 1e8j_A 1 MDIYVCTVCGYE 12 (52)
T ss_dssp CCCEECSSSCCC
T ss_pred CCcEEeCCCCeE
Confidence 457888888543
No 263
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.62 E-value=42 Score=19.20 Aligned_cols=21 Identities=19% Similarity=0.222 Sum_probs=15.6
Q ss_pred CcCCCCCCcccccchhHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~ 208 (221)
..|.|++|.+++...+.+.+.
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H 31 (46)
T 2epw_A 11 KPCKCTECGKAFCWKSQLIMH 31 (46)
T ss_dssp CSEECSSSCCEESSSHHHHHH
T ss_pred CCeeCCCCCCccCCHHHHHHH
Confidence 458999999999876554443
No 264
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.61 E-value=43 Score=19.12 Aligned_cols=21 Identities=24% Similarity=0.324 Sum_probs=15.7
Q ss_pred CcCCCCCCcccccchhHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~ 208 (221)
..+.|++|.+++...+.+-+.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2eow_A 11 KPYKCNECGKAFRARSSLAIH 31 (46)
T ss_dssp CCEECTTSCCEESSHHHHHHH
T ss_pred CCeeccccCChhcCHHHHHHH
Confidence 468999999999876554443
No 265
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=21.53 E-value=42 Score=19.29 Aligned_cols=19 Identities=32% Similarity=0.550 Sum_probs=14.4
Q ss_pred CcCCCCCCcccccchhHHH
Q 027589 188 DKYCCPICSKSVIDMSRTW 206 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~ 206 (221)
..|.|++|.+++...+.+.
T Consensus 11 k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2el6_A 11 NPYKCSQCEKSFSGKLRLL 29 (46)
T ss_dssp CSEECSSSSCEESSHHHHH
T ss_pred CCeECCCCCcccCCHHHHH
Confidence 4689999999998765433
No 266
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=21.51 E-value=43 Score=18.70 Aligned_cols=18 Identities=22% Similarity=0.521 Sum_probs=13.8
Q ss_pred CcCCCCCCcccccchhHH
Q 027589 188 DKYCCPICSKSVIDMSRT 205 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~ 205 (221)
..|.|++|.+++...+.+
T Consensus 9 k~~~C~~C~k~f~~~~~L 26 (42)
T 2el5_A 9 NPYECSECGKAFNRKDQL 26 (42)
T ss_dssp CSEECSSSCCEESSHHHH
T ss_pred CCccCCCcChhhCCHHHH
Confidence 468999999999865443
No 267
>3a7q_B Low-density lipoprotein receptor-related protein; signaling protein; HET: NAG; 2.60A {Homo sapiens}
Probab=21.50 E-value=73 Score=19.63 Aligned_cols=31 Identities=26% Similarity=0.807 Sum_probs=20.2
Q ss_pred ceeecCccCcccccccc--CcceeecCCCCCCCc
Q 027589 123 NYFHCKRCGSCYSTSLR--NNHLCIENSMHHHCP 154 (221)
Q Consensus 123 ~~fHC~~C~~C~s~~~~--~~H~C~e~~~~~~Cp 154 (221)
+.|.|.. +.|++..+. +..-|..++-+.+|+
T Consensus 11 ~~f~C~~-g~CI~~~~~CDg~~DC~DgSDE~~C~ 43 (44)
T 3a7q_B 11 DQFQCRN-ERCIPSVWRCDEDDDCLDHSDEDDCP 43 (44)
T ss_dssp TEEECTT-SCEEEGGGTTSSSCCSSSSTTTSCC-
T ss_pred CceEcCC-CCEeChhhccCCCCCCCCCccccCCC
Confidence 5688887 888887754 445556666666664
No 268
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=21.41 E-value=57 Score=19.71 Aligned_cols=15 Identities=13% Similarity=0.773 Sum_probs=8.8
Q ss_pred CCCCCCcccccchhH
Q 027589 190 YCCPICSKSVIDMSR 204 (221)
Q Consensus 190 ~~CPiCrksi~dm~~ 204 (221)
|.|++|.+.+...+.
T Consensus 3 ~~C~~C~~~f~~~~~ 17 (60)
T 2adr_A 3 FVCEVCTRAFARQEH 17 (60)
T ss_dssp BCCTTTCCCBSCHHH
T ss_pred CcCCCCccccCCHHH
Confidence 566666666655433
No 269
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.32 E-value=35 Score=19.55 Aligned_cols=20 Identities=35% Similarity=0.601 Sum_probs=14.9
Q ss_pred CcCCCCCCcccccchhHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWK 207 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~ 207 (221)
..|.|++|.+++...+.+.+
T Consensus 11 k~~~C~~C~k~f~~~~~L~~ 30 (46)
T 2yts_A 11 KPYICNECGKSFIQKSHLNR 30 (46)
T ss_dssp CSEECSSSCCEESSHHHHHH
T ss_pred cCEECCCCChhhCChHHHHH
Confidence 46899999999987654433
No 270
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.31 E-value=44 Score=19.10 Aligned_cols=20 Identities=20% Similarity=0.290 Sum_probs=14.9
Q ss_pred CcCCCCCCcccccchhHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWK 207 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~ 207 (221)
..+.|++|.+++...+.+.+
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~ 30 (46)
T 2en8_A 11 KSHTCDECGKNFCYISALRI 30 (46)
T ss_dssp SSEECTTTCCEESSHHHHHH
T ss_pred CCeECCCcCcccCCHHHHHH
Confidence 45899999999987654433
No 271
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.16 E-value=44 Score=19.11 Aligned_cols=20 Identities=20% Similarity=0.409 Sum_probs=14.8
Q ss_pred CcCCCCCCcccccchhHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWK 207 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~ 207 (221)
..|.|++|.+++...+.+-+
T Consensus 11 k~~~C~~C~k~f~~~~~L~~ 30 (46)
T 2eme_A 11 KPYVCDYCGKAFGLSAELVR 30 (46)
T ss_dssp CSEECSSSCCEESSHHHHHH
T ss_pred CCeECCCCChhhCCHHHHHH
Confidence 45899999999987654333
No 272
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.14 E-value=44 Score=19.17 Aligned_cols=20 Identities=30% Similarity=0.637 Sum_probs=14.9
Q ss_pred CcCCCCCCcccccchhHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWK 207 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~ 207 (221)
..|.|++|.+++...+.+.+
T Consensus 11 k~~~C~~C~k~f~~~~~L~~ 30 (46)
T 2ep3_A 11 KPYRCAECGKAFTDRSNLFT 30 (46)
T ss_dssp CSEECSSSCCEESSHHHHHH
T ss_pred CCeECCCCCchhCCHHHHHH
Confidence 46899999999987654433
No 273
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.10 E-value=50 Score=18.97 Aligned_cols=17 Identities=24% Similarity=0.637 Sum_probs=13.5
Q ss_pred CcCCCCCCcccccchhH
Q 027589 188 DKYCCPICSKSVIDMSR 204 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~ 204 (221)
..|.|++|.+.+...+.
T Consensus 11 k~~~C~~C~k~F~~~~~ 27 (46)
T 2enh_A 11 KPYECDVCRKAFSHHAS 27 (46)
T ss_dssp SSCBCTTTCCBCSSSHH
T ss_pred CCcCCCCcCchhCCHHH
Confidence 46899999999986544
No 274
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.09 E-value=45 Score=18.77 Aligned_cols=20 Identities=25% Similarity=0.384 Sum_probs=14.9
Q ss_pred CcCCCCCCcccccchhHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWK 207 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~ 207 (221)
..|.|++|.+++...+.+-+
T Consensus 11 k~~~C~~C~k~f~~~~~L~~ 30 (44)
T 2eof_A 11 KPYECNECQKAFNTKSNLMV 30 (44)
T ss_dssp CSEECTTTCCEESCHHHHHH
T ss_pred CCeECCCCCcccCCHhHHHH
Confidence 46899999999987654433
No 275
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.06 E-value=50 Score=18.97 Aligned_cols=18 Identities=22% Similarity=0.346 Sum_probs=14.0
Q ss_pred CcCCCCCCcccccchhHH
Q 027589 188 DKYCCPICSKSVIDMSRT 205 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~ 205 (221)
..|.|++|.+++...+.+
T Consensus 11 k~~~C~~C~k~F~~~~~L 28 (46)
T 2elz_A 11 KPYKCEDCGKGYNRRLNL 28 (46)
T ss_dssp SSCBCSSSCCBCSSHHHH
T ss_pred CCeeCcccCchhCCHHHH
Confidence 468999999999865443
No 276
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.06 E-value=44 Score=18.93 Aligned_cols=21 Identities=19% Similarity=0.390 Sum_probs=15.8
Q ss_pred CcCCCCCCcccccchhHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~ 208 (221)
..|.|++|.+++...+.+-+.
T Consensus 9 k~~~C~~C~k~f~~~~~L~~H 29 (44)
T 2emx_A 9 KPFGCSCCEKAFSSKSYLLVH 29 (44)
T ss_dssp CCEECSSSSCEESSHHHHHHH
T ss_pred cCccCCCCCcccCCHHHHHHH
Confidence 468999999999876554443
No 277
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.98 E-value=51 Score=18.85 Aligned_cols=17 Identities=29% Similarity=0.548 Sum_probs=13.6
Q ss_pred CcCCCCCCcccccchhH
Q 027589 188 DKYCCPICSKSVIDMSR 204 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~ 204 (221)
..|.|++|.+.+...+.
T Consensus 11 k~~~C~~C~k~F~~~~~ 27 (46)
T 2ytn_A 11 KPYKCNECGKVFTQNSH 27 (46)
T ss_dssp SSCBCTTTCCBCSSHHH
T ss_pred cCeECCCCCCeeCCHHH
Confidence 46899999999987544
No 278
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.95 E-value=44 Score=19.06 Aligned_cols=20 Identities=30% Similarity=0.360 Sum_probs=14.9
Q ss_pred CcCCCCCCcccccchhHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWK 207 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~ 207 (221)
..|.|++|.+.+...+.+.+
T Consensus 11 k~~~C~~C~k~F~~~~~L~~ 30 (44)
T 2epv_A 11 KPYECNECGKAFIWKSLLIV 30 (44)
T ss_dssp CSEECSSSCCEESSHHHHHH
T ss_pred cCeECCCCCcccCchHHHHH
Confidence 46899999999987654433
No 279
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.89 E-value=44 Score=19.13 Aligned_cols=18 Identities=22% Similarity=0.586 Sum_probs=13.9
Q ss_pred CcCCCCCCcccccchhHH
Q 027589 188 DKYCCPICSKSVIDMSRT 205 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~ 205 (221)
..|.|++|.+++...+.+
T Consensus 11 k~~~C~~C~k~f~~~~~L 28 (46)
T 2eml_A 11 KPYECSVCGKAFSHRQSL 28 (46)
T ss_dssp CSEECSSSCCEESSHHHH
T ss_pred CCeeCCCcCCccCCHHHH
Confidence 468999999999865443
No 280
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.89 E-value=44 Score=19.07 Aligned_cols=20 Identities=25% Similarity=0.398 Sum_probs=15.0
Q ss_pred CcCCCCCCcccccchhHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWK 207 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~ 207 (221)
..|.|++|.+++...+.+-+
T Consensus 11 ~~~~C~~C~k~F~~~~~L~~ 30 (46)
T 2eoe_A 11 KPYKCNECGKVFTQNSHLAN 30 (46)
T ss_dssp CSSEETTTTEECSSHHHHHH
T ss_pred CCeECCCcChhhCCHHHHHH
Confidence 46899999999987654433
No 281
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=20.84 E-value=64 Score=22.22 Aligned_cols=26 Identities=23% Similarity=0.761 Sum_probs=12.5
Q ss_pred eeeccccccccCCCCcCeeeCCCCCc
Q 027589 90 EYFCDICKFYDDDIEKGQFHCDDCGI 115 (221)
Q Consensus 90 ~y~C~~C~l~dd~~~k~~yHC~~Cgi 115 (221)
..||+.|.-+--...++-|.|..|++
T Consensus 34 pt~C~~C~~~lwGl~kqG~~C~~C~~ 59 (77)
T 2enn_A 34 PTFCSVCHEFVWGLNKQGYQCRQCNA 59 (77)
T ss_dssp CEECSSSCCEECCTTCCEEECSSSCC
T ss_pred CcCccccChhhccccccccCcCCCCC
Confidence 45566664221123455566655553
No 282
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.84 E-value=45 Score=19.13 Aligned_cols=21 Identities=24% Similarity=0.550 Sum_probs=15.7
Q ss_pred CcCCCCCCcccccchhHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~ 208 (221)
..|.|++|.+++...+.+-+.
T Consensus 11 ~~~~C~~C~k~F~~~~~L~~H 31 (46)
T 2em3_A 11 KPYECKVCSKAFTQKAHLAQH 31 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHH
T ss_pred cCeECCCCCcccCCHHHHHHH
Confidence 468999999999876554443
No 283
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.77 E-value=51 Score=18.93 Aligned_cols=18 Identities=22% Similarity=0.473 Sum_probs=13.9
Q ss_pred CcCCCCCCcccccchhHH
Q 027589 188 DKYCCPICSKSVIDMSRT 205 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~ 205 (221)
..|.|++|.+.+...+.+
T Consensus 11 k~~~C~~C~k~f~~~~~L 28 (46)
T 2yth_A 11 KPFQCEECGKRFTQNSHL 28 (46)
T ss_dssp SSBCCSSSCCCBSSHHHH
T ss_pred cCCCCCCCCcccCCHHHH
Confidence 468999999999865443
No 284
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.66 E-value=45 Score=19.10 Aligned_cols=21 Identities=19% Similarity=0.496 Sum_probs=15.5
Q ss_pred CcCCCCCCcccccchhHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~ 208 (221)
..|.|++|.+++...+.+-+.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2enc_A 11 KPFKCEECGKGFYTNSQCYSH 31 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHH
T ss_pred CCcCCCCCCCcCCChHHHHHH
Confidence 468999999999876554433
No 285
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.65 E-value=37 Score=18.94 Aligned_cols=17 Identities=29% Similarity=0.512 Sum_probs=13.3
Q ss_pred CcCCCCCCcccccchhH
Q 027589 188 DKYCCPICSKSVIDMSR 204 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~ 204 (221)
..|.|++|.+++...+.
T Consensus 9 k~~~C~~C~k~f~~~~~ 25 (41)
T 2ept_A 9 RVYECQECGKSFRQKGS 25 (41)
T ss_dssp CCEECSSSCCEESSHHH
T ss_pred CCeECCCCCCCcCCHHH
Confidence 46899999999986543
No 286
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.62 E-value=46 Score=19.06 Aligned_cols=18 Identities=28% Similarity=0.434 Sum_probs=14.0
Q ss_pred CcCCCCCCcccccchhHH
Q 027589 188 DKYCCPICSKSVIDMSRT 205 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~ 205 (221)
..|.|++|.+++...+.+
T Consensus 11 k~~~C~~C~k~F~~~~~L 28 (46)
T 2eq0_A 11 KPYKCHECGKVFRRNSHL 28 (46)
T ss_dssp CCEECTTTCCEESSHHHH
T ss_pred CCeECCCCCchhCCHHHH
Confidence 468999999999876443
No 287
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=20.54 E-value=69 Score=20.95 Aligned_cols=11 Identities=18% Similarity=0.875 Sum_probs=6.3
Q ss_pred cCeeeCCCCCc
Q 027589 105 KGQFHCDDCGI 115 (221)
Q Consensus 105 k~~yHC~~Cgi 115 (221)
|+-|.|.+||+
T Consensus 34 kqg~kC~~C~~ 44 (59)
T 1rfh_A 34 RQALRCANCKF 44 (59)
T ss_dssp SCCEECTTTSC
T ss_pred hCccEeCCCCC
Confidence 45566666654
No 288
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.53 E-value=46 Score=19.01 Aligned_cols=21 Identities=24% Similarity=0.376 Sum_probs=15.5
Q ss_pred CcCCCCCCcccccchhHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~ 208 (221)
..|.|++|.+++...+.+-+.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2emm_A 11 RPHKCNECGKSFIQSAHLIQH 31 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHH
T ss_pred CCeeCCCCChhhCCHHHHHHH
Confidence 468999999999876554433
No 289
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=20.49 E-value=74 Score=19.90 Aligned_cols=7 Identities=43% Similarity=1.160 Sum_probs=3.5
Q ss_pred cCCCCCC
Q 027589 80 VCTNCGV 86 (221)
Q Consensus 80 ~C~~Cg~ 86 (221)
.||.||.
T Consensus 7 ~CP~C~~ 13 (50)
T 1pft_A 7 VCPACES 13 (50)
T ss_dssp SCTTTSC
T ss_pred eCcCCCC
Confidence 4555544
No 290
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.48 E-value=49 Score=18.44 Aligned_cols=20 Identities=15% Similarity=0.513 Sum_probs=14.8
Q ss_pred CcCCCCCCcccccchhHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWK 207 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~ 207 (221)
..|.|++|.+++...+.+-+
T Consensus 10 k~~~C~~C~k~f~~~~~L~~ 29 (42)
T 2en2_A 10 KPYKCETCGARFVQVAHLRA 29 (42)
T ss_dssp CSEECTTTCCEESSHHHHHH
T ss_pred CCEeCCCcChhhCCHHHHHH
Confidence 46899999999987654433
No 291
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.31 E-value=39 Score=19.41 Aligned_cols=18 Identities=22% Similarity=0.384 Sum_probs=13.9
Q ss_pred CcCCCCCCcccccchhHH
Q 027589 188 DKYCCPICSKSVIDMSRT 205 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~ 205 (221)
..|.|++|.+++...+.+
T Consensus 11 k~~~C~~C~k~f~~~~~L 28 (46)
T 2ysp_A 11 KPYKCEKCGKGYNSKFNL 28 (46)
T ss_dssp CSEEETTTTEEESCHHHH
T ss_pred CCeECCCCCCccCCHHHH
Confidence 468999999999876443
No 292
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.27 E-value=46 Score=19.13 Aligned_cols=18 Identities=17% Similarity=0.290 Sum_probs=14.0
Q ss_pred CcCCCCCCcccccchhHH
Q 027589 188 DKYCCPICSKSVIDMSRT 205 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~ 205 (221)
..|.|++|.+++...+.+
T Consensus 11 k~~~C~~C~k~f~~~~~L 28 (46)
T 2eoy_A 11 KCFKCNKCEKTFSCSKYL 28 (46)
T ss_dssp CCEECSSSCCEESSSHHH
T ss_pred CCEECcCCCCcCCCHHHH
Confidence 458999999999876543
No 293
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.18 E-value=47 Score=19.09 Aligned_cols=21 Identities=24% Similarity=0.392 Sum_probs=15.4
Q ss_pred CcCCCCCCcccccchhHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~ 208 (221)
..|.|++|.+.+...+.+-+.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2yto_A 11 KPYKCSDCGKAFTRKSGLHIH 31 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHH
T ss_pred CCEECcccCCccCCHhHHHHH
Confidence 468999999999876544433
No 294
>3p8b_A DNA-directed RNA polymerase, subunit E''; transcription elongation factor, RNA polymerase, transferase transcription complex; 1.80A {Pyrococcus furiosus}
Probab=20.08 E-value=43 Score=24.21 Aligned_cols=22 Identities=23% Similarity=0.588 Sum_probs=16.8
Q ss_pred eeecCCCCccccccccCCCCCCC
Q 027589 65 QVICSVCDTEQPVAQVCTNCGVN 87 (221)
Q Consensus 65 ~v~C~~C~~~q~~~~~C~~Cg~~ 87 (221)
.-.|..|+..++.. .||+||..
T Consensus 23 ~rAC~~C~~v~~~d-~CPnCgs~ 44 (81)
T 3p8b_A 23 EKACRHCHYITSED-RCPVCGSR 44 (81)
T ss_dssp CEEETTTCBEESSS-SCTTTCCC
T ss_pred HHHHhhCCCccCCC-CCCCCCCC
Confidence 44699999887664 69999763
No 295
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=20.04 E-value=54 Score=18.80 Aligned_cols=21 Identities=24% Similarity=0.335 Sum_probs=14.8
Q ss_pred CcCCCCCCcccccchhHHHHH
Q 027589 188 DKYCCPICSKSVIDMSRTWKR 208 (221)
Q Consensus 188 ~~~~CPiCrksi~dm~~~~~~ 208 (221)
..|.|++|.+.+...+.+-+.
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H 31 (46)
T 2emj_A 11 KPFECAECGKSFSISSQLATH 31 (46)
T ss_dssp CSEECSSSSCEESSHHHHHHH
T ss_pred CCEECCCCCcccCCHHHHHHH
Confidence 458899999998865544333
Done!