BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027592
(221 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 78/134 (58%), Gaps = 2/134 (1%)
Query: 84 QACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRV 143
+A L D+D DG + EL A +IR PT+EE++ M+SEVD +G+G I + +S +
Sbjct: 14 EAFGLFDKDGDGCITVEEL-ATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
Query: 144 GNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKN 203
+ E ELKE F FD D +G I+A EL V LG++L T ++ MI D +
Sbjct: 73 AKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKL-TDEEVEQMIKEADLD 131
Query: 204 GDGFVCFEDFSRMM 217
GDG V +E+F +MM
Sbjct: 132 GDGQVNYEEFVKMM 145
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
S + E E EL E F FD D +G I+A EL V T LG++L T D+ MI
Sbjct: 70 SLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKL-TDDEVDEMIREA 128
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG + +E+F RMM
Sbjct: 129 DIDGDGHINYEEFVRMM 145
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D EL++A K+ DRD +G++ +EL ++ LG + T +EV M+ E D +GDG+I
Sbjct: 80 DSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG-EKLTDDEVDEMIREADIDGDGHINY 138
Query: 137 EALI 140
E +
Sbjct: 139 EEFV 142
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
S + E E EL E F FD D +G I+A EL V T LG++L T D+ MI
Sbjct: 70 SLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKL-TDDEVDEMIREA 128
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG + +E+F RMM
Sbjct: 129 DIDGDGHINYEEFVRMM 145
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D EL++A K+ DRD +G++ +EL ++ LG + T +EV M+ E D +GDG+I
Sbjct: 80 DSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG-EKLTDDEVDEMIREADIDGDGHINY 138
Query: 137 EALI 140
E +
Sbjct: 139 EEFV 142
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 2/160 (1%)
Query: 58 SVLHEISGDWSDMSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQE 117
+V+ + + W ++ + E +A L D+D DG + EL ++ LG +P T+
Sbjct: 280 AVMQKKTKGWEPTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEA 338
Query: 118 EVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELF 177
E++ M++EVD +GDG I + + + E E++E F FD D +G I+A EL
Sbjct: 339 ELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 398
Query: 178 GVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 217
V T LG++L T ++ MI D +GDG V +E+F +MM
Sbjct: 399 HVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYEEFVQMM 437
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +GDG I +
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGDGTIDFPEFL 369
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 370 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 428
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 429 DIDGDGQVNYEEFVQMM 445
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +GDG I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGDGTIDFPEFL 69
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 128
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 129 DIDGDGQVNYEEFVQMM 145
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +GDG I +
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGDGTIDFPEFL 370
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 371 TMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 429
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 430 DIDGDGQVNYEEFVQMM 446
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +GDG I +
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGDGTIDFPEFL 369
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 370 TMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 428
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 429 DIDGDGQVNYEEFVQMM 445
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +GDG I +
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGDGTIDFPEFL 369
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 370 TMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 428
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 429 DIDGDGQVNYEEFVQMM 445
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 275 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 333
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 334 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 392
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 393 DIDGDGQVNYEEFVQMM 409
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 313 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 371
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 372 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 430
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 431 DIDGDGQVNYEEFVQMM 447
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 370
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 371 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 429
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 430 DIDGDGQVNYEEFVQMM 446
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 370
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 371 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 429
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 430 DIDGDGQVNYEEFVQMM 446
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 336
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 337 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 395
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 396 DIDGDGQVNYEEFVQMM 412
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 70
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDQMIREA 129
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 130 DIDGDGQVNYEEFVQMM 146
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 336
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 337 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 395
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 396 DIDGDGQVNYEEFVQMM 412
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 15 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 73
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 74 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 132
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 133 DIDGDGQVNYEEFVQMM 149
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 17 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 75
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 76 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 134
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 135 DIDGDGQVNYEEFVQMM 151
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 128
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 129 DIDGDGQVNYEEFVQMM 145
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 70
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 129
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 130 DIDGDGQVNYEEFVQMM 146
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 70
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 129
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 130 DIDGDGQVNYEEFVQMM 146
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 67
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 68 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 126
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 127 DIDGDGQVNYEEFVQMM 143
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 67
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 68 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 126
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 127 DIDGDGQVNYEEFVQMM 143
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 370
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 371 TMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 429
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 430 DIDGDGQVNYEEFVQMM 446
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 13 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 71
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 72 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 130
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 131 DIDGDGQVNYEEFVQMM 147
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 128
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 129 DIDGDGQVNYEEFVQMM 145
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 65
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 66 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 124
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 125 DIDGDGQVNYEEFVQMM 141
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 70
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 129
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 130 DIDGDGQVNYEEFVQMM 146
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 70
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 129
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 130 DIDGDGQVNYEEFVQMM 146
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 67
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 68 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 126
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 127 DIDGDGQVNYEEFVQMM 143
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 10 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 68
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 69 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 127
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 128 DIDGDGQVNYEEFVQMM 144
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 66
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 67 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 125
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 126 DIDGDGQVNYEEFVQMM 142
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 370
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 371 TMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 429
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 430 DIDGDGQVNYEEFVQMM 446
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 70
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG+ L T ++ MI
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXL-TDEEVDEMIREA 129
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 130 DIDGDGQVNYEEFVQMM 146
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG+ L T ++ MI
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXL-TDEEVDEMIREA 128
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F +MM
Sbjct: 129 DIDGDGQVNYEEFVQMM 145
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 84/148 (56%), Gaps = 2/148 (1%)
Query: 70 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDRE 129
M+ ++ D E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDAD 59
Query: 130 GDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCT 189
G+G I ++ + + E ELKE F FD D +G I+A EL V T LG++L T
Sbjct: 60 GNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-T 118
Query: 190 LDDCRGMIALVDKNGDGFVCFEDFSRMM 217
++ MI D +GDG + +E+F ++M
Sbjct: 119 DEEVDEMIREADVDGDGQINYEEFVKVM 146
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M+SE+DR+G+G + +
Sbjct: 11 EFKEAFSLFDKDGDGCITTRELGTVMRSLGQNP-TEAELRDMMSEIDRDGNGTVDFPEFL 69
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + E E++E F FD D +G ++A EL V T+LG++L ++ MI
Sbjct: 70 GMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSD-EEVDEMIRAA 128
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F R++
Sbjct: 129 DTDGDGQVNYEEFVRVL 145
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 48 SAPDRVGTPTSVLHEISGDWSDMSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLI 107
S DR G T E G + D D E+ +A ++ D+D +G V +EL ++
Sbjct: 53 SEIDRDGNGTVDFPEFLGMMARKMKDT--DNEEEIREAFRVFDKDGNGFVSAAELRHVMT 110
Query: 108 RLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
RLG + + EEV M+ D +GDG + E +
Sbjct: 111 RLG-EKLSDEEVDEMIRAADTDGDGQVNYEEFV 142
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E ELKE F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 70 NLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREA 128
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F ++M
Sbjct: 129 DVDGDGQVNYEEFVQVM 145
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 66
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E ELKE F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 67 NLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREA 125
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F ++M
Sbjct: 126 DVDGDGQVNYEEFVQVM 142
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 128
Query: 201 DKNGDGFVCFEDFSRMM 217
+ +GDG V +E+F +MM
Sbjct: 129 NIDGDGQVNYEEFVQMM 145
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREA 128
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F MM
Sbjct: 129 DIDGDGQVNYEEFVTMM 145
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREA 128
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F MM
Sbjct: 129 DIDGDGQVNYEEFVTMM 145
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 70
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREA 129
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F MM
Sbjct: 130 DIDGDGQVNYEEFVTMM 146
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 84/148 (56%), Gaps = 2/148 (1%)
Query: 70 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDRE 129
M+ ++ D E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDAD 59
Query: 130 GDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCT 189
G+G I ++ + + E ELKE F FD D +G I+A EL V T LG++L T
Sbjct: 60 GNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-T 118
Query: 190 LDDCRGMIALVDKNGDGFVCFEDFSRMM 217
++ MI D +GDG + +++F ++M
Sbjct: 119 DEEVDEMIREADVDGDGQINYDEFVKVM 146
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 70
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREA 129
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F MM
Sbjct: 130 DIDGDGQVNYEEFVTMM 146
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 70
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIRES 129
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F MM
Sbjct: 130 DIDGDGQVNYEEFVTMM 146
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E +LKE F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 70 NLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREA 128
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F ++M
Sbjct: 129 DVDGDGQVNYEEFVQVM 145
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 78/137 (56%), Gaps = 4/137 (2%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 70 TMMARKMKD--SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREA 126
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG V +E+F MM
Sbjct: 127 DIDGDGQVNYEEFVTMM 143
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 79/137 (57%), Gaps = 3/137 (2%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 65
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 66 TMMARKMKDTDSE-EIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 123
Query: 201 DKNGDGFVCFEDFSRMM 217
+ +GDG V +E+F +MM
Sbjct: 124 NIDGDGQVNYEEFVQMM 140
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + +L ++ LG +P T+ E++ M++EV +G+G I +
Sbjct: 312 EFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNP-TEAELQDMINEVGADGNGTIDFPQFL 370
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + + E E++E F F D +G I+A +L V T LG++L T ++ MI
Sbjct: 371 TMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKL-TDEEVDEMIREA 429
Query: 201 DKNGDGFVCFEDFSRMM 217
+GDG V +E F +MM
Sbjct: 430 GIDGDGQVNYEQFVQMM 446
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL + LG +P T+ E++ ++EVD +G+G I +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNP-TEAELQDXINEVDADGNGTIDFPEFL 70
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + E E++E F FD D +G I+A EL V T LG++L T ++ I
Sbjct: 71 TXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKL-TDEEVDQXIREA 129
Query: 201 DKNGDGFVCFEDF 213
D +GDG V +E+F
Sbjct: 130 DIDGDGQVNYEEF 142
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+ +A ++ D+D +G + +EL + LG + T EEV + E D +GDG +
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVXTNLG-EKLTDEEVDQXIREADIDGDGQVNY 139
Query: 137 EALIS 141
E +
Sbjct: 140 EEFVQ 144
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 2/144 (1%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
++ + E+ +A L D D G + EL+ + LG +P +EE+K M+SE+D++G G
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPK-KEEIKKMISEIDKDGSGT 80
Query: 134 IPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDC 193
I E ++ + E E+ + F FD D+ G IT ++L V +LG+ L T ++
Sbjct: 81 IDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENL-TEEEL 139
Query: 194 RGMIALVDKNGDGFVCFEDFSRMM 217
+ MIA D+N D + ++F R+M
Sbjct: 140 QEMIAEADRNDDNEIDEDEFIRIM 163
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL + LG +P T+ E++ ++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNP-TEAELQDXINEVDADGNGTIDFPEFL 69
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + E E++E F FD D +G I+A EL V T LG++L T ++ I
Sbjct: 70 TXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKL-TDEEVDEXIREA 128
Query: 201 DKNGDGFVCFEDF 213
D +GDG V +E+F
Sbjct: 129 DIDGDGQVNYEEF 141
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+ +A ++ D+D +G + +EL + LG + T EEV + E D +GDG +
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVXTNLG-EKLTDEEVDEXIREADIDGDGQVNY 138
Query: 137 EALIS 141
E +
Sbjct: 139 EEFVQ 143
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
+ E+ +A L D D G + EL+ + LG +P +EE+K M+SE+D+EG G +
Sbjct: 3 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPK-KEEIKKMISEIDKEGTGKMNF 61
Query: 137 EALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGM 196
++ + E + E+ + F FD D GKI+ + L V +LG+ L T ++ + M
Sbjct: 62 GDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENL-TDEELQEM 120
Query: 197 IALVDKNGDGFVCFEDFSRMM 217
I D++GDG V ++F R+M
Sbjct: 121 IDEADRDGDGEVSEQEFLRIM 141
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL + LG +P T+ E++ ++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGCNP-TEAELQDXINEVDADGNGTINFPEFL 69
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ + E E++E F FD D +G I+A EL V T LG++L T ++ I
Sbjct: 70 TXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKL-TDEEVDEXIREA 128
Query: 201 DKNGDGFVCFEDF 213
D +GDG V +E+F
Sbjct: 129 DIDGDGQVNYEEF 141
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+ +A ++ D+D +G + +EL + LG + T EEV + E D +GDG +
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVXTNLG-EKLTDEEVDEXIREADIDGDGQVNY 138
Query: 137 EALIS 141
E +
Sbjct: 139 EEFVQ 143
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
+S +M E A + D D G + EL ++ LG PT+EE+ +++ EVD +G G
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQ-TPTKEELDAIIEEVDEDGSGT 69
Query: 134 IPLE---ALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTL 190
I E ++ R + E EL E F FD + DG I AEEL +F G E T
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASG-EHVTD 128
Query: 191 DDCRGMIALVDKNGDGFVCFEDFSRMME 218
++ ++ DKN DG + F++F +MME
Sbjct: 129 EEIESLMKDGDKNNDGRIDFDEFLKMME 156
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 78/144 (54%), Gaps = 2/144 (1%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
++ + E+ +A L D D G + EL+ + LG +P +EE+K M++++D++G G
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPK-KEEIKKMIADIDKDGSGT 60
Query: 134 IPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDC 193
I E + + E E+ + F FD D GKI+ + L V +LG+ + T ++
Sbjct: 61 IDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENM-TDEEL 119
Query: 194 RGMIALVDKNGDGFVCFEDFSRMM 217
+ MI D++GDG V E+F R+M
Sbjct: 120 QEMIDEADRDGDGEVNEEEFFRIM 143
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
+S +M E A + D D G + EL ++ LG PT+EE+ +++ EVD +G G
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQ-TPTKEELDAIIEEVDEDGSGT 69
Query: 134 IPLE---ALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTL 190
I E ++ R + E EL E F FD + DG I AEEL +F G E T
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASG-EHVTD 128
Query: 191 DDCRGMIALVDKNGDGFVCFEDFSRMME 218
++ ++ DKN DG + F++F +MME
Sbjct: 129 EEIESLMKDGDKNNDGRIDFDEFLKMME 156
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
+S +M E A + D D G + EL ++ LG +P T+EE+ +++ EVD +G G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGSGT 72
Query: 134 IPLE---ALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTL 190
I E ++ R + E EL++ F FD + DG I EEL + G E T
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATG-EHVTE 131
Query: 191 DDCRGMIALVDKNGDGFVCFEDFSRMME 218
+D ++ DKN DG + F++F +MME
Sbjct: 132 EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 5/148 (3%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
+S +M E A + D D G + EL ++ LG +P T+EE+ +++ EVD +G G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGSGT 72
Query: 134 IPLE---ALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTL 190
I E ++ R + E EL + F FD + DG I EEL + G E T
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATG-EHVTE 131
Query: 191 DDCRGMIALVDKNGDGFVCFEDFSRMME 218
+D ++ DKN DG + F++F +MME
Sbjct: 132 EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 74/148 (50%), Gaps = 5/148 (3%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
+S +M E A + D D G + EL ++ LG +P T+EE+ +++ EVD +G G
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGSGT 69
Query: 134 IPLE---ALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTL 190
I E ++ R + E EL F FD + DG I EEL + G E T
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATG-EHVTE 128
Query: 191 DDCRGMIALVDKNGDGFVCFEDFSRMME 218
+D ++ DKN DG + F++F +MME
Sbjct: 129 EDIEDLMKDSDKNNDGRIDFDEFLKMME 156
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 74/148 (50%), Gaps = 5/148 (3%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
+S +M E A + D D G + EL ++ LG +P T+EE+ +++ EVD +G G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGSGT 72
Query: 134 IPLE---ALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTL 190
I E ++ R + E EL F FD + DG I EEL + G E T
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATG-EHVTE 131
Query: 191 DDCRGMIALVDKNGDGFVCFEDFSRMME 218
+D ++ DKN DG + F++F +MME
Sbjct: 132 EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 74/148 (50%), Gaps = 5/148 (3%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
+S +M E A + D D G + EL ++ LG +P T+EE+ +++ EVD +G G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGSGT 72
Query: 134 IPLE---ALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTL 190
I E ++ R + E EL F FD + DG I EEL + G+ +
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIE- 131
Query: 191 DDCRGMIALVDKNGDGFVCFEDFSRMME 218
+D ++ DKN DG + F++F +MME
Sbjct: 132 EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 71 SADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREG 130
S++++ + E +A L D+DN+G + SEL ++ LG P++ EV +++E+D +G
Sbjct: 2 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGL-SPSEAEVNDLMNEIDVDG 60
Query: 131 DGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDEL--C 188
+ I ++ + E EL E F FD + DG I+A EL V T +G++L
Sbjct: 61 NHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 120
Query: 189 TLDDCRGMIALVDKNGDGFVCFEDFSRMM 217
+DD ++ +G G + + F+ ++
Sbjct: 121 EVDDMLREVS----DGSGEINIQQFAALL 145
Score = 33.9 bits (76), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 144 GNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKN 203
G+S+ E KE F FD D++G I++ EL V LG + ++ +D +
Sbjct: 1 GSSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEA-EVNDLMNEIDVD 59
Query: 204 GDGFVCFEDFSRMMELQ 220
G+ + F +F +M Q
Sbjct: 60 GNHQIEFSEFLALMSRQ 76
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 71 SADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREG 130
S++++ + E +A L D+DN+G + SEL ++ LG P++ EV +++E+D +G
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGL-SPSEAEVNDLMNEIDVDG 59
Query: 131 DGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDEL--C 188
+ I ++ + E EL E F FD + DG I+A EL V T +G++L
Sbjct: 60 NHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 119
Query: 189 TLDDCRGMIALVDKNGDGFVCFEDFSRMM 217
+DD ++ +G G + + F+ ++
Sbjct: 120 EVDDMLREVS----DGSGEINIQQFAALL 144
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Query: 71 SADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREG 130
S++++ + E +A L D+DN+G + SEL ++ LG P++ EV +++E+D +G
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGL-SPSEAEVNDLMNEIDVDG 59
Query: 131 DGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELC 188
+ I ++ + E EL E F FD + DG I+A EL V T +G++L
Sbjct: 60 NHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLT 117
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 7/122 (5%)
Query: 70 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDRE 129
MS +++ + E +A L D+DN G + SEL ++ LG P++ EV +++E+D +
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGL-SPSEAEVADLMNEIDVD 59
Query: 130 GDGYIPLE---ALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDE 186
G+ I AL+SR C + E EL E F FD + DG I+A EL V T +G++
Sbjct: 60 GNHAIEFSEFLALMSR--QLKCNDS-EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEK 116
Query: 187 LC 188
L
Sbjct: 117 LT 118
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E A D++ G + EL L+ LG +P T+ E++ +++E + +G +
Sbjct: 11 EFKDAFVQFDKEGTGKIATRELGTLMRTLGQNP-TEAELQDLIAEAENNNNGQLNFTEFC 69
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ E E E++E F FD D DG I+ EL V LG E T ++ MI
Sbjct: 70 GIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLG-EKVTDEEIDEMIREA 128
Query: 201 DKNGDGFVCFEDFSRMM 217
D +GDG + +E+F M+
Sbjct: 129 DFDGDGMINYEEFVWMI 145
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+ +A K+ DRD DG + +EL ++I LG + T EE+ M+ E D +GDG I
Sbjct: 80 DTEEEMREAFKIFDRDGDGFISPAELRFVMINLG-EKVTDEEIDEMIREADFDGDGMINY 138
Query: 137 EALI 140
E +
Sbjct: 139 EEFV 142
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 68/150 (45%), Gaps = 11/150 (7%)
Query: 75 SLDMNYELVQACKLLDRDNDGVVLRSEL-------EALLIRLGADPPTQEEVKSMLSEVD 127
+L+ EL K LD++ DG + + EL LG +EEV ++L EVD
Sbjct: 350 TLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVD 409
Query: 128 REGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDEL 187
+ +GYI IS + E L+ F+ FD D GKIT EEL +F
Sbjct: 410 FDKNGYIEYSEFISVCMDKQI-LFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSISE 468
Query: 188 CTLDDCRGMIALVDKNGDGFVCFEDFSRMM 217
T +D G D+N D + F++F MM
Sbjct: 469 KTWNDVLGE---ADQNKDNMIDFDEFVSMM 495
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E+ +A L D +NDG + EL+ + LG + P +E + ++ E D EG + +
Sbjct: 24 EIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKRE-ILDLIDEYDSEGRHLMKYDDFY 82
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+G + E+K F FD DH GKI+ + L V +LG E T ++ R MI
Sbjct: 83 IVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG-ETLTDEELRAMIEEF 141
Query: 201 DKNGDGFVCFEDF 213
D +GDG + +F
Sbjct: 142 DLDGDGEINENEF 154
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 15/157 (9%)
Query: 75 SLDMNYELVQACKLLDRDNDGVVLRSEL---EALLIRL-GADPPT---------QEEVKS 121
+LD +L + + LD +NDG++ R EL +RL G D + ++++ S
Sbjct: 326 TLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDS 385
Query: 122 MLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFT 181
++ +D +G G I I+ + + + E ++ F FD D GKI+ +ELF +F+
Sbjct: 386 LMPLLDMDGSGSIEYSEFIASAIDRTILLSRE-RMERAFKMFDKDGSGKISTKELFKLFS 444
Query: 182 KLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMME 218
+ D +++ +I VD N DG V F +F M++
Sbjct: 445 Q-ADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQ 480
Score = 30.0 bits (66), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 84 QACKLLDRDNDGVVLRSELEALLIRLGADPPTQ-EEVKSMLSEVDREGDGYIPLEALISR 142
+A K+ D+D G + EL L + AD Q EE++S++ +VD DG + +
Sbjct: 421 RAFKMFDKDGSGKISTKELFKLFSQ--ADSSIQMEELESIIEQVDNNKDGEVDFNEFVEM 478
Query: 143 VGN 145
+ N
Sbjct: 479 LQN 481
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLE---ALISRVGNSSCEP 150
DG + EL ++ LG +P T EE++ M+ EVD +G G + + ++ R +
Sbjct: 33 DGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 151 ACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCF 210
E EL + F FD + DG I EEL + G E T DD ++ DKN DG + +
Sbjct: 92 KSEEELSDLFRMFDKNADGYIDLEELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDY 150
Query: 211 EDFSRMM 217
++F M
Sbjct: 151 DEFLEFM 157
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLE---ALISRVGNSSCEP 150
DG + EL ++ LG +P T EE++ M+ EVD +G G + + ++ R +
Sbjct: 33 DGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 151 ACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCF 210
E EL + F FD + DG I EEL + G E T DD ++ DKN DG + +
Sbjct: 92 KTEEELSDLFRMFDKNADGYIDLEELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDY 150
Query: 211 EDFSRMM 217
++F M
Sbjct: 151 DEFLEFM 157
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLE---ALISRVGNSSCEP 150
DG + EL ++ LG +P T EE++ M+ EVD +G G + + ++ R +
Sbjct: 33 DGCISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKG 91
Query: 151 ACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCF 210
E EL + F FD + DG I EEL + G E T DD ++ DKN DG + +
Sbjct: 92 KTEEELSDLFRMFDKNADGYIDLEELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDY 150
Query: 211 EDFSRMM 217
++F M
Sbjct: 151 DEFLEFM 157
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 155 ELKETFDFFD-ADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 213
E K FD F DG I+ +EL V LG + T ++ + MI VD++G G V F++F
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 214 SRMM 217
MM
Sbjct: 78 LVMM 81
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 11/145 (7%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGAD-------PPTQEEVKSMLSEVDREGDGY 133
EL + +D++ DG + R EL +L + P + EV ++L D + +GY
Sbjct: 347 ELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGY 406
Query: 134 IPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDC 193
I ++ V + +L+ F FD D +GKI+ +EL VF G +
Sbjct: 407 IDYSEFVT-VAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVF---GLDHLESKTW 462
Query: 194 RGMIALVDKNGDGFVCFEDFSRMME 218
+ MI+ +D N DG V FE+F +M++
Sbjct: 463 KEMISGIDSNNDGDVDFEEFCKMIQ 487
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 11/145 (7%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGAD-------PPTQEEVKSMLSEVDREGDGY 133
EL + +D++ DG + R EL +L + P + EV ++L D + +GY
Sbjct: 64 ELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGY 123
Query: 134 IPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDC 193
I ++ V + +L+ F FD D +GKI+ +EL VF G +
Sbjct: 124 IDYSEFVT-VAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVF---GLDHLESKTW 179
Query: 194 RGMIALVDKNGDGFVCFEDFSRMME 218
+ MI+ +D N DG V FE+F +M++
Sbjct: 180 KEMISGIDSNNDGDVDFEEFCKMIQ 204
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 152 CEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFE 211
E ELKE F FD D +G I+A EL V LG++L T ++ MI D +GDG V +E
Sbjct: 7 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKL-TDEEVEQMIKEADLDGDGQVNYE 65
Query: 212 DFSRMM 217
+F +MM
Sbjct: 66 EFVKMM 71
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D EL +A K+ D+D +G + SEL ++I LG + T EEV+ M+ E D +GDG +
Sbjct: 6 DAEEELKEAFKVFDKDQNGYISASELRHVMINLG-EKLTDEEVEQMIKEADLDGDGQVNY 64
Query: 137 EALI 140
E +
Sbjct: 65 EEFV 68
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 152 CEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFE 211
E ELKE F FD D +G I+A EL V LG++L T ++ MI D +GDG V +E
Sbjct: 2 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKL-TDEEVEQMIKEADLDGDGQVNYE 60
Query: 212 DFSRMM 217
+F +MM
Sbjct: 61 EFVKMM 66
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D EL +A K+ D+D +G + SEL ++I LG + T EEV+ M+ E D +GDG +
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLG-EKLTDEEVEQMIKEADLDGDGQVNY 59
Query: 137 EALI 140
E +
Sbjct: 60 EEFV 63
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLE---ALISRVGNSSCEP 150
DG + EL ++ LG +P T EE++ M+ EVD +G G + + ++ R +
Sbjct: 33 DGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 151 ACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCF 210
E EL + F +D + DG I +EL + G E T DD ++ DKN DG + +
Sbjct: 92 KSEEELSDLFRMWDKNADGYIDLDELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDY 150
Query: 211 EDFSRMM 217
++F M
Sbjct: 151 DEFLEFM 157
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLE---ALISRVGNSSCEP 150
DG + EL ++ LG +P T EE++ M+ EVD +G G + + ++ R +
Sbjct: 33 DGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 151 ACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCF 210
E EL + F FD + DG I +EL + G E T DD ++ DKN DG + +
Sbjct: 92 KSEEELSDLFRMFDKNADGYIDLDELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDY 150
Query: 211 EDFSRMM 217
+++ M
Sbjct: 151 DEWLEFM 157
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 14/153 (9%)
Query: 75 SLDMNYELVQACKLLDRDNDGVVLRSEL----EALLIRLGADP------PTQEEVKSMLS 124
S D EL +D++ DG + R+EL + L+ G D + EV +L
Sbjct: 353 SQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLD 412
Query: 125 EVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLG 184
VD + +GYI ++ V L+ F FD+D+ GKI++ EL +F G
Sbjct: 413 AVDFDKNGYIEYSEFVT-VAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIF---G 468
Query: 185 DELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 217
+ + +++ VDKN DG V F++F +M+
Sbjct: 469 VSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 501
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 14/153 (9%)
Query: 75 SLDMNYELVQACKLLDRDNDGVVLRSEL----EALLIRLGADP------PTQEEVKSMLS 124
S D EL +D++ DG + R+EL + L+ G D + EV +L
Sbjct: 330 SQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLD 389
Query: 125 EVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLG 184
VD + +GYI ++ V L+ F FD+D+ GKI++ EL +F G
Sbjct: 390 AVDFDKNGYIEYSEFVT-VAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIF---G 445
Query: 185 DELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 217
+ + +++ VDKN DG V F++F +M+
Sbjct: 446 VSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 478
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 14/153 (9%)
Query: 75 SLDMNYELVQACKLLDRDNDGVVLRSEL----EALLIRLGADP------PTQEEVKSMLS 124
S D EL +D++ DG + R+EL + L+ G D + EV +L
Sbjct: 354 SQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLD 413
Query: 125 EVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLG 184
VD + +GYI ++ V L+ F FD+D+ GKI++ EL +F G
Sbjct: 414 AVDFDKNGYIEYSEFVT-VAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIF---G 469
Query: 185 DELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 217
+ + +++ VDKN DG V F++F +M+
Sbjct: 470 VSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 502
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 5/141 (3%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
EL +A + D+D DG + +L + +G PT+ E+ + +++ G++ + +
Sbjct: 26 ELREAFREFDKDKDGYINCRDLGNCMRTMGY-MPTEMELIELSQQINMNLGGHVDFDDFV 84
Query: 141 SRVGNSSCEPACE----PELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGM 196
+G + EL++ F FD + DG+I+ EL KL D +
Sbjct: 85 ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEI 144
Query: 197 IALVDKNGDGFVCFEDFSRMM 217
I VD NGDG V FE+F RMM
Sbjct: 145 IRDVDLNGDGRVDFEEFVRMM 165
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 135 PLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCR 194
PL L + + S P EL+E F FD D DG I +L +G + T +
Sbjct: 8 PLRNLSRK--DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMG-YMPTEMELI 64
Query: 195 GMIALVDKNGDGFVCFEDFSRMM 217
+ ++ N G V F+DF +M
Sbjct: 65 ELSQQINMNLGGHVDFDDFVELM 87
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 149 EPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFV 208
E E EL E F FD D +G I+A EL V T LG++L T D+ MI D +GDG +
Sbjct: 3 EQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKL-TDDEVDEMIREADIDGDGHI 61
Query: 209 CFEDFSRMM 217
+E+F RMM
Sbjct: 62 NYEEFVRMM 70
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
EL++A K+ DRD +G++ +EL ++ LG + T +EV M+ E D +GDG+I E +
Sbjct: 9 ELIEAFKVFDRDGNGLISAAELRHVMTNLG-EKLTDDEVDEMIREADIDGDGHINYEEFV 67
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
EL +A + D+D DG + +L + +G PT+ E+ + +++ G++ + +
Sbjct: 12 ELREAFREFDKDKDGYINCRDLGNCMRTMGY-MPTEMELIELSQQINMNLGGHVDFDDFV 70
Query: 141 SRVG----NSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGM 196
+G + + EL++ F FD + DG+I+ EL KL D +
Sbjct: 71 ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEI 130
Query: 197 IALVDKNGDGFVCFEDFSRMM 217
I VD NGDG V FE+F RMM
Sbjct: 131 IRDVDLNGDGRVDFEEFVRMM 151
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 145 NSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNG 204
+ S P EL+E F FD D DG I +L +G + T + + ++ N
Sbjct: 2 DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMG-YMPTEMELIELSQQINMNL 60
Query: 205 DGFVCFEDFSRMM 217
G V F+DF +M
Sbjct: 61 GGHVDFDDFVELM 73
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 75/159 (47%), Gaps = 24/159 (15%)
Query: 75 SLDMNYELVQACKLLDRDNDGVVLRSEL---EALLIRLGADPPT-------QEEVKSMLS 124
+L+ EL Q + LD + DG + R EL L++ D + + EV +L
Sbjct: 309 TLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQ 368
Query: 125 EVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEEL---FGVFT 181
VD + +GYI ++ + + E L F FD+D GKIT EEL FGV T
Sbjct: 369 SVDFDRNGYIEYSEFVTVCMDKQLLLSRE-RLLAAFQQFDSDGSGKITNEELGRLFGV-T 426
Query: 182 KLGDELC--TLDDCRGMIALVDKNGDGFVCFEDFSRMME 218
++ DE L +C DKN DG V FE+F MM+
Sbjct: 427 EVDDETWHQVLQEC-------DKNNDGEVDFEEFVEMMQ 458
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E+ +A L D +NDG + EL+ LG + P +E + ++ E D EG +
Sbjct: 24 EIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKRE-ILDLIDEYDSEGRHLXKYDDFY 82
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
G + E+K F FD DH GKI+ + L V +LG E T ++ R I
Sbjct: 83 IVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG-ETLTDEELRAXIEEF 141
Query: 201 DKNGDGFVCFEDF 213
D +GDG + +F
Sbjct: 142 DLDGDGEINENEF 154
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 75/159 (47%), Gaps = 24/159 (15%)
Query: 75 SLDMNYELVQACKLLDRDNDGVVLRSEL---EALLIRLGADPPT-------QEEVKSMLS 124
+L+ EL Q + LD + DG + R EL L++ D + + EV +L
Sbjct: 35 TLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQ 94
Query: 125 EVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEEL---FGVFT 181
VD + +GYI ++ + + E L F FD+D GKIT EEL FGV T
Sbjct: 95 SVDFDRNGYIEYSEFVTVCMDKQLLLSRER-LLAAFQQFDSDGSGKITNEELGRLFGV-T 152
Query: 182 KLGDELC--TLDDCRGMIALVDKNGDGFVCFEDFSRMME 218
++ DE L +C DKN DG V FE+F MM+
Sbjct: 153 EVDDETWHQVLQEC-------DKNNDGEVDFEEFVEMMQ 184
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLE---ALISRVGNSSCEP 150
DG + EL ++ LG +P T EE++ M+ EVD +G G + + ++ R +
Sbjct: 33 DGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 151 ACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCF 210
E EL + F D + DG I +EL + G E T DD ++ DKN DG + +
Sbjct: 92 KSEEELSDLFRMXDKNADGYIDLDELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDY 150
Query: 211 EDFSRMM 217
++F M
Sbjct: 151 DEFLEFM 157
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLE---ALISRVGNSSCEP 150
DG + EL ++ LG +P T EE++ M+ EVD +G G + + ++ R +
Sbjct: 33 DGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 151 ACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCF 210
E EL + F FD + DG I +EL + G E T DD ++ DKN DG + +
Sbjct: 92 KSEEELSDLFRMFDKNADGYIDLDELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDY 150
Query: 211 EDFSRMM 217
++ M
Sbjct: 151 DEXLEFM 157
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 5/141 (3%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
EL +A + D+D DG + +L + +G PT+ E+ + +++ G++ + +
Sbjct: 12 ELREAFREFDKDKDGYINCRDLGNCMRTMGY-MPTEMELIELSQQINMNLGGHVDFDDFV 70
Query: 141 SRVG----NSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGM 196
+G + + EL++ F FD + DG+I+ EL L D +
Sbjct: 71 ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEI 130
Query: 197 IALVDKNGDGFVCFEDFSRMM 217
I VD NGDG V FE+F RMM
Sbjct: 131 IRDVDLNGDGRVDFEEFVRMM 151
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 145 NSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNG 204
+ S P EL+E F FD D DG I +L +G + T + + ++ N
Sbjct: 2 DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMG-YMPTEMELIELSQQINMNL 60
Query: 205 DGFVCFEDFSRMM 217
G V F+DF +M
Sbjct: 61 GGHVDFDDFVELM 73
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 152 CEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFE 211
E E++E F FD D +G I+A EL V T LG++L T ++ MI D +GDG V +E
Sbjct: 7 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYE 65
Query: 212 DFSRMM 217
+F +MM
Sbjct: 66 EFVQMM 71
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E+ +A ++ D+D +G + +EL ++ LG + T EEV M+ E D +GDG + E +
Sbjct: 10 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 68
Query: 141 S 141
Sbjct: 69 Q 69
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 112 DPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKI 171
D ++EE++ D++G+GYI A + V + E + E+ E D D DG++
Sbjct: 4 DTDSEEEIREAFRVFDKDGNGYISA-AELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 62
Query: 172 TAEELFGVFT 181
EE + T
Sbjct: 63 NYEEFVQMMT 72
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 152 CEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFE 211
E ELKE F FD D +G I+A EL V T LG++L T ++ MI D +GDG + +E
Sbjct: 2 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADVDGDGQINYE 60
Query: 212 DFSRMM 217
+F ++M
Sbjct: 61 EFVKVM 66
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D EL +A ++ D+D +G + +EL ++ LG + T EEV M+ E D +GDG I
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG-EKLTDEEVDEMIREADVDGDGQINY 59
Query: 137 EALI 140
E +
Sbjct: 60 EEFV 63
Score = 27.3 bits (59), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 115 TQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAE 174
++EE+K D++ +G+I A + V + E + E+ E D D DG+I E
Sbjct: 2 SEEELKEAFRVFDKDQNGFISA-AELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 175 ELFGV 179
E V
Sbjct: 61 EFVKV 65
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 152 CEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFE 211
E E++E F FD D +G I+A EL V T LG++L T ++ MI D +GDG V +E
Sbjct: 6 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYE 64
Query: 212 DFSRMM 217
+F +MM
Sbjct: 65 EFVQMM 70
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E+ +A ++ D+D +G + +EL ++ LG + T EEV M+ E D +GDG + E +
Sbjct: 9 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 67
Query: 141 S 141
Sbjct: 68 Q 68
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 112 DPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKI 171
D ++EE++ D++G+GYI A + V + E + E+ E D D DG++
Sbjct: 3 DTDSEEEIREAFRVFDKDGNGYISA-AELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 61
Query: 172 TAEELFGVFT 181
EE + T
Sbjct: 62 NYEEFVQMMT 71
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 75/158 (47%), Gaps = 19/158 (12%)
Query: 72 ADISLDMNYELVQACKL-LDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREG 130
A S D + + ++A L LD + G + + +L L R G P ++ +L ++D +G
Sbjct: 46 AQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPNFDL--LLDQIDSDG 103
Query: 131 DGYIP----LEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDE 186
G I L A I R S C F FD D+DG+IT EL V G++
Sbjct: 104 SGNIDYTEFLAAAIDRRQLSKKLIYC------AFRVFDVDNDGEITTAELAHVLFN-GNK 156
Query: 187 LCTL-----DDCRGMIALVDKNGDGFVCFEDFSRMMEL 219
+ + + MI VDKNGDG + F +FS MM+L
Sbjct: 157 RGNITERDVNQVKKMIREVDKNGDGKIDFYEFSEMMKL 194
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 152 CEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFE 211
E E++E F FD D +G I+A EL V T LG++L T ++ MI D +GDG V +E
Sbjct: 4 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYE 62
Query: 212 DFSRMM 217
+F +MM
Sbjct: 63 EFVQMM 68
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E+ +A ++ D+D +G + +EL ++ LG + T EEV M+ E D +GDG + E +
Sbjct: 7 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 65
Query: 141 S 141
Sbjct: 66 Q 66
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 112 DPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKI 171
D ++EE++ D++G+GYI A + V + E + E+ E D D DG++
Sbjct: 1 DTDSEEEIREAFRVFDKDGNGYISA-AELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 59
Query: 172 TAEELFGVFT 181
EE + T
Sbjct: 60 NYEEFVQMMT 69
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 152 CEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFE 211
E E++E F FD D +G I+A EL V T LG++L T ++ MI D +GDG V +E
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYE 61
Query: 212 DFSRMM 217
+F +MM
Sbjct: 62 EFVQMM 67
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E+ +A ++ D+D +G + +EL ++ LG + T EEV M+ E D +GDG + E +
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 141 S 141
Sbjct: 65 Q 65
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 152 CEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFE 211
E E++E F FD D +G I+A +L V T LG++L T ++ MI D +GDG V +E
Sbjct: 5 SEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYE 63
Query: 212 DFSRMM 217
DF +MM
Sbjct: 64 DFVQMM 69
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E+ +A ++ D+D +G + ++L ++ LG + T EEV M+ E D +GDG + E +
Sbjct: 8 EIREAFRVFDKDGNGYISAADLRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEDFV 66
Query: 141 S 141
Sbjct: 67 Q 67
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 SRVGNSSCEPACEPELKETF 160
+ + + E E++E F
Sbjct: 70 TMMARKMKDTDSEEEIREAF 89
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFS 214
E KE F FD D DG IT +EL V LG + T + + MI VD +G+G + F +F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 215 RMM 217
MM
Sbjct: 70 TMM 72
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 75 SLDMNYELVQACKLLDRDNDGVVLRSEL----EALLIRLGADP------PTQEEVKSMLS 124
S D EL D++ DG + R+EL + L G D + EV +L
Sbjct: 330 SQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLD 389
Query: 125 EVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLG 184
VD + +GYI ++ V L+ F FD+D+ GKI++ EL +F G
Sbjct: 390 AVDFDKNGYIEYSEFVT-VAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATIF---G 445
Query: 185 DELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 217
+ + +++ VDKN DG V F++F + +
Sbjct: 446 VSDVDSETWKSVLSEVDKNNDGEVDFDEFQQXL 478
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 10/137 (7%)
Query: 88 LLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSS 147
+LD D G + + +L+ L + G P ++ +L ++D +G G I I+ +
Sbjct: 60 VLDEDGKGYITKEQLKKGLEKDGLKLPYNFDL--LLDQIDSDGSGKIDYTEFIAAALDR- 116
Query: 148 CEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTL-----DDCRGMIALVDK 202
+ + + F FD D+DG+IT EL + G++ + + + MI VDK
Sbjct: 117 -KQLSKKLIYCAFRVFDVDNDGEITTAELAHILYN-GNKKGNITQRDVNRVKRMIRDVDK 174
Query: 203 NGDGFVCFEDFSRMMEL 219
N DG + F +FS MM+L
Sbjct: 175 NNDGKIDFHEFSEMMKL 191
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 149 EPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFV 208
P + E + F FDA+ DGKI+A EL LG T D+ + M+A +D +GDGF+
Sbjct: 4 HPQDKAERERIFKRFDANGDGKISAAELGEALKTLGS--ITPDEVKHMMAEIDTDGDGFI 61
Query: 209 CFEDFSRMMELQR 221
F++F+ R
Sbjct: 62 SFQEFTDFGRANR 74
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLE 137
K D + DG + +EL L LG+ P +EVK M++E+D +GDG+I +
Sbjct: 16 KRFDANGDGKISAAELGEALKTLGSITP--DEVKHMMAEIDTDGDGFISFQ 64
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEE--VKSMLSEVDREGDGYIPLEALISRVG 144
K LD + DG V E++A + + P + E ++ + +D +G+G I L A ++
Sbjct: 7 KQLDANGDGSVSYEEVKAFV---SSKRPIKNEQLLQLIFKAIDIDGNGEIDL-AEFTKFA 62
Query: 145 NSSCEPACEPE---LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVD 201
+ E E LK + DAD DGK+T EE+ F K G E I D
Sbjct: 63 AAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVV-----DQIMKAD 117
Query: 202 KNGDGFVCFEDF 213
NGDG++ E+F
Sbjct: 118 ANGDGYITLEEF 129
Score = 34.3 bits (77), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 86 CKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS 141
KL+D D DG + + E+ + G E+V + + D GDGYI LE ++
Sbjct: 81 YKLMDADGDGKLTKEEVTTFFKKFG-----YEKVVDQIMKADANGDGYITLEEFLA 131
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 118 EVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELF 177
E++ M++EVD +G+G I ++ + + E E++E F FD D +G I+A EL
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 61
Query: 178 GVFTKLG 184
V T LG
Sbjct: 62 HVMTNLG 68
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEAL 139
EL +D D +G + E ++ R D ++EE++ D++G+GYI L
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 60
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 122 MLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFT 181
+ + D++ +G+I E I+ V +++ E +L F+ +D +HDG IT +E+ +
Sbjct: 68 LFTVFDKDNNGFIHFEEFIT-VLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVA 126
Query: 182 ---KLGDELCTLDD--------CRGMIALVDKNGDGFVCFEDF 213
K+ + TL++ + + L+DKN DG++ ++F
Sbjct: 127 SVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEF 169
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 7/137 (5%)
Query: 82 LVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL-EALI 140
L + K++D DN G + EL+ L R+G++ + E+K ++ D + G I E +
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSEL-MESEIKDLMDAADIDKSGTIDYGEFIA 70
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ V + E E L F +FD D G IT +E+ G + +DD MI +
Sbjct: 71 ATVHLNKLER--EENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDD---MIKEI 125
Query: 201 DKNGDGFVCFEDFSRMM 217
D++ DG + + +F+ MM
Sbjct: 126 DQDNDGQIDYGEFAAMM 142
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 47.0 bits (110), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 153 EPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 212
E E++E F FD D +G I+A EL V T LG++L T ++ MI D +GDG V +E+
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYEE 59
Query: 213 FSRMM 217
F +MM
Sbjct: 60 FVQMM 64
Score = 37.0 bits (84), Expect = 0.008, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E+ +A ++ D+D +G + +EL ++ LG + T EEV M+ E D +GDG + E +
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 61
Score = 29.6 bits (65), Expect = 1.5, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 116 QEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEE 175
+EE++ D++G+GYI A + V + E + E+ E D D DG++ EE
Sbjct: 1 EEEIREAFRVFDKDGNGYIS-AAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 59
Query: 176 LFGVFT 181
+ T
Sbjct: 60 FVQMMT 65
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 46.6 bits (109), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 153 EPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 212
E E++E F FD D +G I+A EL V T LG++L T ++ MI D +GDG V +E+
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYEE 62
Query: 213 FSRMM 217
F +MM
Sbjct: 63 FVQMM 67
Score = 37.4 bits (85), Expect = 0.006, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+ +A ++ D+D +G + +EL ++ LG + T EEV M+ E D +GDG +
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNY 60
Query: 137 EALI 140
E +
Sbjct: 61 EEFV 64
Score = 29.6 bits (65), Expect = 1.2, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 115 TQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAE 174
++EE++ D++G+GYI A + V + E + E+ E D D DG++ E
Sbjct: 3 SEEEIREAFRVFDKDGNGYIS-AAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 175 ELFGVFT 181
E + T
Sbjct: 62 EFVQMMT 68
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 152 CEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFE 211
E E++E F D D +G I+A EL V T LG++L T ++ MI D +GDG V +E
Sbjct: 27 SEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYE 85
Query: 212 DFSRMM 217
+F +MM
Sbjct: 86 EFVQMM 91
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E+ +A ++ D+D +G + +EL ++ LG + T EEV M+ E D +GDG + E +
Sbjct: 30 EIREAFRVEDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 88
Query: 141 S 141
Sbjct: 89 Q 89
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 109 LGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHD 168
L D ++EE++ D++G+GYI A + V + E + E+ E D D D
Sbjct: 21 LMKDTDSEEEIREAFRVEDKDGNGYISA-AELRHVMTNLGEKLTDEEVDEMIREADIDGD 79
Query: 169 GKITAEELFGVFT 181
G++ EE + T
Sbjct: 80 GQVNYEEFVQMMT 92
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 89 LDRDNDGVVLRSELEALLIRLGAD--PPTQEEVKSMLSEVDREGDGYIP----LEALISR 142
LD DN G + E+ L ++G PP ++ +L ++D G I L A I +
Sbjct: 66 LDVDNSGTLSSQEILDGLKKIGYQKIPP---DIHQVLRDIDSNASGQIHYTDFLAATIDK 122
Query: 143 VGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDC-RGMIALVD 201
E P F FFD D +GKI+ EEL +F + E +D ++ VD
Sbjct: 123 QTYLKKEVCLIP-----FKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVD 177
Query: 202 KNGDGFVCFEDFSRMMELQR 221
NGDG + F +F MM ++
Sbjct: 178 LNGDGEIDFHEFMLMMSKKK 197
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 153 EPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 212
+ E++E FD FD D G I A+EL LG E ++ + MI+ +DK+G G + FE+
Sbjct: 29 KQEIREAFDLFDTDGSGTIDAKELKVAMRALGFE-PKKEEIKKMISEIDKDGSGTIDFEE 87
Query: 213 FSRMM 217
F MM
Sbjct: 88 FLTMM 92
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
++ + E+ +A L D D G + EL+ + LG +P +EE+K M+SE+D++G G
Sbjct: 24 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPK-KEEIKKMISEIDKDGSGT 82
Query: 134 IPLEALIS 141
I E ++
Sbjct: 83 IDFEEFLT 90
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEE--VKSMLSEVDREGDGYIPLEALISRVG 144
K LD DN G + E +L P Q+ V+ ++ D +G+G + + I V
Sbjct: 14 KKLDLDNSGSLSVEEFMSL-------PELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVS 66
Query: 145 NSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKL-GDEL--CTLDD-CRGMIALV 200
S + E +L+ F +D D DG I+ ELF V + G+ L L I
Sbjct: 67 QFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINA 126
Query: 201 DKNGDGFVCFEDF 213
DK+GDG + FE+F
Sbjct: 127 DKDGDGRISFEEF 139
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 82 LVQ-ACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIP----L 136
LVQ + D D +G V E + + +++++ D + DGYI
Sbjct: 40 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELF 99
Query: 137 EALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGV 179
+ L VGN+ + + + +T D D DG+I+ EE V
Sbjct: 100 QVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAV 142
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEE--VKSMLSEVDREGDGYIPLEALISRVG 144
K LD DN G + E +L P Q+ V+ ++ D +G+G + + I V
Sbjct: 13 KKLDLDNSGSLSVEEFMSL-------PELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVS 65
Query: 145 NSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKL-GDEL--CTLDD-CRGMIALV 200
S + E +L+ F +D D DG I+ ELF V + G+ L L I
Sbjct: 66 QFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINA 125
Query: 201 DKNGDGFVCFEDF 213
DK+GDG + FE+F
Sbjct: 126 DKDGDGRISFEEF 138
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 82 LVQ-ACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIP----L 136
LVQ + D D +G V E + + +++++ D + DGYI
Sbjct: 39 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELF 98
Query: 137 EALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGV 179
+ L VGN+ + + + +T D D DG+I+ EE V
Sbjct: 99 QVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAV 141
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEE--VKSMLSEVDREGDGYIPLEALISRVG 144
K LD DN G + E +L P Q+ V+ ++ D +G+G + + I V
Sbjct: 28 KKLDLDNSGSLSVEEFMSL-------PELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVS 80
Query: 145 NSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKL-GDEL--CTLDD-CRGMIALV 200
S + E +L+ F +D D DG I+ ELF V + G+ L L I
Sbjct: 81 QFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINA 140
Query: 201 DKNGDGFVCFEDF 213
DK+GDG + FE+F
Sbjct: 141 DKDGDGRISFEEF 153
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Query: 82 LVQ-ACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIP----L 136
LVQ + D D +G V E + + +++++ D + DGYI
Sbjct: 54 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELF 113
Query: 137 EALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKL 183
+ L VGN+ + + + +T D D DG+I+ EE V L
Sbjct: 114 QVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL 160
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +GDG I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGDGTIDFPEFL 69
Query: 141 S 141
+
Sbjct: 70 T 70
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFS 214
E KE F FD D DG IT +EL V LG + T + + MI VD +GDG + F +F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGDGTIDFPEFL 69
Query: 215 RMM 217
MM
Sbjct: 70 TMM 72
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 111 ADPPTQEEV---KSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADH 167
AD T+E++ K S D++GDG I + L V S + E EL++ + DAD
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKEL-GTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 168 DGKI 171
DG I
Sbjct: 60 DGTI 63
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEE--VKSMLSEVDREGDGYIPLEALISRVG 144
K LD DN G + E +L P Q+ V+ ++ D +G+G + + I V
Sbjct: 27 KKLDLDNSGSLSVEEFMSL-------PELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVS 79
Query: 145 NSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKL-GDEL--CTLDD-CRGMIALV 200
S + E +L+ F +D D DG I+ ELF V + G+ L L I
Sbjct: 80 QFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINA 139
Query: 201 DKNGDGFVCFEDF 213
DK+GDG + FE+F
Sbjct: 140 DKDGDGRISFEEF 152
Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Query: 82 LVQ-ACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIP----L 136
LVQ + D D +G V E + + +++++ D + DGYI
Sbjct: 53 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELF 112
Query: 137 EALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKL 183
+ L VGN+ + + + +T D D DG+I+ EE V L
Sbjct: 113 QVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL 159
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 160 FDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMMEL 219
F FD + DGKI++ EL LG T D+ R M+A +D +GDGF+ F++F+
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLGS--VTPDEVRRMMAEIDTDGDGFISFDEFTDFARA 74
Query: 220 QR 221
R
Sbjct: 75 NR 76
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLE 137
K D + DG + SEL L LG+ P +EV+ M++E+D +GDG+I +
Sbjct: 18 KRFDTNGDGKISSSELGDALKTLGSVTP--DEVRRMMAEIDTDGDGFISFD 66
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNS 146
K +D + DG V E++A + + A ++ ++ + +D +G+G I G+
Sbjct: 7 KEIDVNGDGAVSYEEVKAFVSKKRA-IKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
Query: 147 SCEPACEPE--LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNG 204
+ + + LK + D D DGK+T EE+ F K G ++ + D NG
Sbjct: 66 QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG-----IEKVAEQVMKADANG 120
Query: 205 DGFVCFEDF 213
DG++ E+F
Sbjct: 121 DGYITLEEF 129
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 86 CKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
KL+D D DG + + E+ + + G + ++ +K+ D GDGYI LE +
Sbjct: 81 YKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKA-----DANGDGYITLEEFL 130
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNS 146
K +D + DG V E++A + + A ++ ++ + +D +G+G I G+
Sbjct: 7 KEIDVNGDGAVSYEEVKAFVSKKRA-IKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
Query: 147 SCEPACEPE--LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNG 204
+ + + LK + D D DGK+T EE+ F K G ++ + D NG
Sbjct: 66 QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG-----IEKVAEQVMKADANG 120
Query: 205 DGFVCFEDF 213
DG++ E+F
Sbjct: 121 DGYITLEEF 129
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 86 CKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
KL+D D DG + + E+ + + G + ++ +K+ D GDGYI LE +
Sbjct: 81 YKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKA-----DANGDGYITLEEFL 130
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 84 QACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS 141
+A L D+D DG + EL A +IR PT+EE++ M+SEVD +G+G I + +S
Sbjct: 14 EAFGLFDKDGDGCITVEEL-ATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFS 214
+ KE F FD D DG IT EEL V L D+ T ++ + MI+ VD +G+G + F++F
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSL-DQNPTEEELQDMISEVDADGNGTIEFDEFL 69
Query: 215 RMM 217
+M
Sbjct: 70 SLM 72
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 84 QACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS 141
+A L D+D DG + EL A +IR PT+EE++ M+SEVD +G+G I + +S
Sbjct: 14 EAFGLFDKDGDGCITVEEL-ATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFS 214
+ KE F FD D DG IT EEL V L D+ T ++ + MI+ VD +G+G + F++F
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSL-DQNPTEEELQDMISEVDADGNGTIEFDEFL 69
Query: 215 RMM 217
+M
Sbjct: 70 SLM 72
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%)
Query: 154 PELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 213
EL++ F FD + DG+I+ EL KL D +I VD NGDG V FE+F
Sbjct: 7 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 66
Query: 214 SRMM 217
RMM
Sbjct: 67 VRMM 70
Score = 30.0 bits (66), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
EL A + D + DG + SEL + +L +++ ++ +VD GDG + E +
Sbjct: 8 ELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 67
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Query: 83 VQAC-KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS 141
+Q C ++ D+DNDG V EL + L LG + PT E+ ++ +++ + + +
Sbjct: 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKN-PTNAELNTIKGQLNAKEFDLATFKTVYR 65
Query: 142 RVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVD 201
+ + E + E+ + F D + +G I EL + LGD L T + ++ V
Sbjct: 66 KPIKTPTEQS--KEMLDAFRALDKEGNGTIQEAELRQLLLNLGDAL-TSSEVEELMKEVS 122
Query: 202 KNGDGFVCFEDFSRMM 217
+GDG + +E F M+
Sbjct: 123 VSGDGAINYESFVDML 138
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 151 ACEPELKETFDFFDADHDGKITAEELFGVFTKLG 184
A +++E F FD D+DGK++ EEL LG
Sbjct: 2 ASADQIQECFQIFDKDNDGKVSIEELGSALRSLG 35
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFS 214
E KE F FD D DG IT +EL V LG T + + MI VD +G+G + F +F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 215 RMM 217
MM
Sbjct: 70 TMM 72
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYI 134
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTI 63
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 S 141
+
Sbjct: 70 T 70
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFS 214
E KE F FD D DG IT +EL V LG + T + + MI VD +G+G + F +F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 215 RMM 217
MM
Sbjct: 70 TMM 72
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 153 EPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 212
E ELKE F D + G I + L + LGDEL T D+ MIA D +G G V +E+
Sbjct: 6 ERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDEL-TEDEIENMIAETDTDGSGTVDYEE 64
Query: 213 FSRMM 217
F +M
Sbjct: 65 FKCLM 69
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLE 137
EL +A ++LD++ GV+ L +L LG D T++E+++M++E D +G G + E
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILKSLG-DELTEDEIENMIAETDTDGSGTVDYE 63
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFS 214
E KE F FD D DG IT +EL V LG T + + MI VD +G+G + F +F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 215 RMM 217
MM
Sbjct: 70 TMM 72
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYI 134
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTI 63
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFS 214
E KE F FD D DG IT +EL V LG T + + MI VD +G+G + F +F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 215 RMM 217
MM
Sbjct: 70 TMM 72
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYI 134
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTI 63
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFS 214
E KE F FD D DG IT +EL V LG T + + MI VD +G+G + F +F
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 215 RMM 217
MM
Sbjct: 71 TMM 73
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYI 134
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTI 64
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 S 141
+
Sbjct: 70 T 70
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFS 214
E KE F FD D DG IT +EL V LG + T + + MI VD +G+G + F +F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 215 RMM 217
MM
Sbjct: 70 TMM 72
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFS 214
E KE F FD D DG IT +EL V LG T + + MI VD +G+G + F +F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 215 RMM 217
MM
Sbjct: 70 TMM 72
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 S 141
+
Sbjct: 70 T 70
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYI 134
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTI 63
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFS 214
E KE F FD D DG IT +EL V LG + T + + MI VD +G+G + F +F
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 215 RMM 217
+M
Sbjct: 70 NLM 72
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGA--DPPTQEEVKSMLSEVDREGDGYIPLEA 138
E +A +L D + G + + L+ +L + G +P E M +E D G+G I
Sbjct: 7 EFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNE---MFNEADATGNGKIQFPE 63
Query: 139 LISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDEL 187
+S +G + E L++ F FD + G I L LGD L
Sbjct: 64 FLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRL 112
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 5/93 (5%)
Query: 118 EVKSMLSEVDREGDGYIPLEAL--ISRVGNSSCEPACEPELKETFDFFDADHDGKITAEE 175
E K D E G+I E L + + EPA E F+ DA +GKI E
Sbjct: 7 EFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAA---FNEMFNEADATGNGKIQFPE 63
Query: 176 LFGVFTKLGDELCTLDDCRGMIALVDKNGDGFV 208
+ + + + D R D G G++
Sbjct: 64 FLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYI 96
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 73 DISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDG 132
+++ + E+ +A L D D G + EL+ LG P +EE+K +SE+D+EG G
Sbjct: 24 ELTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGF-EPKKEEIKKXISEIDKEGTG 82
Query: 133 YIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDD 192
++ E + E+ + F FD D GKI+ + L V +LG+ L T ++
Sbjct: 83 KXNFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENL-TDEE 141
Query: 193 CRGMIALVDKNGDGFVCFEDFSRM 216
+ I D++GDG V ++F R+
Sbjct: 142 LQEXIDEADRDGDGEVSEQEFLRI 165
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 111 ADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGK 170
++ T+EE+ D + G I + L RV E + EL+E D D D DG+
Sbjct: 98 SEKDTKEEILKAFKLFDDDETGKISFKNL-KRVAKELGENLTDEELQEXIDEADRDGDGE 156
Query: 171 ITAEELFGVFTK 182
++ +E + K
Sbjct: 157 VSEQEFLRIXKK 168
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYI 134
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLN-PTEAELQDMINEVDADGNGTI 63
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFS 214
E KE F +D D DG IT +EL V LG T + + MI VD +G+G + F +F
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLN-PTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 215 RMM 217
MM
Sbjct: 70 TMM 72
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
EL +A ++D+D DG + +L+ + LG PP +E+ +ML E G + A +
Sbjct: 17 ELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPP-DDELNAMLKEC----PGQLNFTAFL 71
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELC 188
+ G E L+ F FD D G I + L + +GD
Sbjct: 72 TLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFS 119
Score = 31.2 bits (69), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLG-----DEL-CTLDDCRGMIALV 200
ELKE F D D DG I E+L +F+ LG DEL L +C G +
Sbjct: 17 ELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQLNFT 68
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFS 214
E++E FD FDAD G I +EL LG E ++ + MI+ +DK G G + F DF
Sbjct: 32 EIREAFDLFDADGTGTIDVKELKVAMRALGFE-PKKEEIKKMISEIDKEGTGKMNFGDFL 90
Query: 215 RMM 217
+M
Sbjct: 91 TVM 93
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 73 DISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDG 132
+++ + E+ +A L D D G + EL+ + LG +P +EE+K M+SE+D+EG G
Sbjct: 24 ELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPK-KEEIKKMISEIDKEGTG 82
Query: 133 YI 134
+
Sbjct: 83 KM 84
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Query: 79 NYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEA 138
++E + + D G++L E L I+ T+ ++ ++ E D G+G I ++
Sbjct: 21 DFETPEGSGRVSTDQIGIIL----EVLGIQ-----QTKSTIRQLIDEFDPFGNGDIDFDS 71
Query: 139 ---LISRVGNSSCEP-ACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCR 194
+ +R P + EL+E F +D + +G I+ + + + +L DE + +D
Sbjct: 72 FKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAEL-DETLSSEDLD 130
Query: 195 GMIALVDKNGDGFVCFEDFSRMM 217
MI +D +G G V FE+F +M
Sbjct: 131 AMIDEIDADGSGTVDFEEFMGVM 153
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E+++A K+ D + DGV+ E + ++ ++G +P T EV+ + E D +G+G I + +
Sbjct: 9 EILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 68
Query: 141 SRVGNSS 147
+ S
Sbjct: 69 DLIKKSK 75
Score = 30.0 bits (66), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 153 EPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 212
E E+ F FDA+ DG I +E + K+G+E T + + D++G+G + +
Sbjct: 7 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPE 66
Query: 213 FSRMM 217
F ++
Sbjct: 67 FMDLI 71
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 154 PELKETFDFFDADHDGKITAEELFGVFTKLGDE--LCTLDDCRGMIALVDKNGDGFVCFE 211
E K FD FDAD G I+ +EL V LG C LD +I VD++G G + FE
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELD---AIICEVDEDGSGTIDFE 76
Query: 212 DFSRMMELQ 220
+F MM Q
Sbjct: 77 EFLVMMVRQ 85
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 72 ADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGD 131
A +S +M E A + D D G + EL ++ LG +P T+ E+ +++ EVD +G
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP-TKCELDAIICEVDEDGS 70
Query: 132 GYIPLEALI 140
G I E +
Sbjct: 71 GTIDFEEFL 79
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 155 ELKETFDFFDADHD--GKITAEELFGVFTKLGDEL----CTLDDCRGMIALVDKNGDGFV 208
E+K F+ F A +I+ EEL V LG L TLD+ MI VDKNGDG V
Sbjct: 6 EIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDE---MIEEVDKNGDGEV 62
Query: 209 CFEDFSRMM 217
FE+F MM
Sbjct: 63 SFEEFLVMM 71
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 154 PELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 213
E K FD FDAD G I+ +EL V LG T ++ +I VD++G G + FE+F
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQN-PTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 214 SRMM 217
MM
Sbjct: 79 LVMM 82
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
+S +M E A + D D G + EL ++ LG +P T+EE+ +++ EVD +G G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGSGT 72
Query: 134 IPLEALI 140
I E +
Sbjct: 73 IDFEEFL 79
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 71 SADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREG 130
S++++ + E +A L D+DN+G + SEL ++ LG P++ EV +++E+D +G
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGL-SPSEAEVNDLMNEIDVDG 59
Query: 131 DGYIPLE---ALISR 142
+ I AL+SR
Sbjct: 60 NHQIEFSEFLALMSR 74
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 154 PELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 213
E KE F FD D++G I++ EL V LG + ++ +D +G+ + F +F
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEA-EVNDLMNEIDVDGNHQIEFSEF 68
Query: 214 SRMMELQ 220
+M Q
Sbjct: 69 LALMSRQ 75
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 154 PELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 213
E K FD FDAD G I+ +EL V LG T ++ +I VD++G G + FE+F
Sbjct: 9 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQN-PTKEELDAIIEEVDEDGSGTIDFEEF 67
Query: 214 SRMMELQ 220
MM Q
Sbjct: 68 LVMMVRQ 74
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 72 ADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGD 131
A +S +M E A + D D G + EL ++ LG +P T+EE+ +++ EVD +G
Sbjct: 1 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGS 59
Query: 132 GYIPLEALI 140
G I E +
Sbjct: 60 GTIDFEEFL 68
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 15/139 (10%)
Query: 84 QACKLLDRDNDGVVLRSELEALLIRLGADPPTQE--EVKSML-SEVDREGDGYIPLEALI 140
QA L DR G + ++ + LL G +P E E++S L +EVD E ++
Sbjct: 9 QAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDME-----QFLQVL 63
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCT--LDDCRGMIA 198
+R N P E + F FD D G I EL V T LG++L +D+ +
Sbjct: 64 NRP-NGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVP 122
Query: 199 LVDKNGDGFVCFEDFSRMM 217
+ DG V + DF +M+
Sbjct: 123 V----KDGMVNYHDFVQMI 137
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 72/152 (47%), Gaps = 13/152 (8%)
Query: 73 DISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGD- 131
D S + E +A +L DR DG +L S+ ++ LG +P E +K + + E +
Sbjct: 2 DFSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNL 61
Query: 132 ------GYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGD 185
++P+ I++ + + C + E FD + +G + E+ V LG+
Sbjct: 62 KTLKFEQFLPMMQTIAK----NKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGE 117
Query: 186 ELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 217
++ T ++ ++A ++ +G + +E+ RM+
Sbjct: 118 KM-TEEEVEQLVA-GHEDSNGCINYEELVRMV 147
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 148 CEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGF 207
E + E+ + F FD D GKI+ + L V +LG+ L T ++ + MI D++GDG
Sbjct: 5 SEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENL-TDEELQEMIDEADRDGDGE 63
Query: 208 VCFEDFSRMM 217
V ++F R+M
Sbjct: 64 VSEQEFLRIM 73
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+++A KL D D G + L+ + LG + T EE++ M+ E DR+GDG +
Sbjct: 8 DTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLTDEELQEMIDEADRDGDGEVSE 66
Query: 137 EALISRVGNSSC 148
+ + + +S
Sbjct: 67 QEFLRIMKKTSL 78
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 111 ADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGK 170
++ T+EE+ D + G I + L RV E + EL+E D D D DG+
Sbjct: 5 SEKDTKEEILKAFKLFDDDETGKISFKNL-KRVAKELGENLTDEELQEMIDEADRDGDGE 63
Query: 171 ITAEELFGVFTK 182
++ +E + K
Sbjct: 64 VSEQEFLRIMKK 75
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 21/120 (17%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADP-----------PTQEEVKSMLSEVDRE 129
E +A +L DR DG +L S+ ++ LG +P P +E+KS VD E
Sbjct: 11 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKS--RRVDFE 68
Query: 130 GDGYIP-LEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELC 188
++P L+A+ G + E E F FD + +GK+ EL V T LG+++
Sbjct: 69 --TFLPMLQAVAKNRGQGTYEDYLEG-----FRVFDKEGNGKVMGAELRHVLTTLGEKMT 121
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A ++D++ DG + + +L +L +G +P T E ++ M+SE G I +
Sbjct: 8 EFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNP-TDEYLEGMMSEAP----GPINFTMFL 62
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMI--A 198
+ G E ++ F FD + G I + L + T +GD T ++ M A
Sbjct: 63 TMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRF-TDEEVDEMYREA 121
Query: 199 LVDKNGDGFVCFEDFSRMME 218
+DK G+ + +F+R+++
Sbjct: 122 PIDKKGN--FNYVEFTRILK 139
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS 141
K D + DG + SEL L LG+ + +EV+ M++E+D +GDG+I IS
Sbjct: 10 KRFDTNGDGKISLSELTDALRTLGS--TSADEVQRMMAEIDTDGDGFIDFNEFIS 62
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 213
+++ F FD + DGKI+ EL LG + D+ + M+A +D +GDGF+ F +F
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRTLGS--TSADEVQRMMAEIDTDGDGFIDFNEF 60
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS 141
K D + DG + SEL L LG+ + +EV+ M++E+D +GDG+I IS
Sbjct: 9 KRFDTNGDGKISLSELTDALRTLGS--TSADEVQRMMAEIDTDGDGFIDFNEFIS 61
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 213
+++ F FD + DGKI+ EL LG + D+ + M+A +D +GDGF+ F +F
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTLGS--TSADEVQRMMAEIDTDGDGFIDFNEF 59
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 154 PELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 213
E K FD FDAD G I+ + L V LG T ++ +I VD++G G + FE+F
Sbjct: 20 AEFKAAFDMFDADGGGDISTKALGTVMRMLGQN-PTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 214 SRMM 217
MM
Sbjct: 79 LVMM 82
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
+S +M E A + D D G + L ++ LG +P T+EE+ +++ EVD +G G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNP-TKEELDAIIEEVDEDGSGT 72
Query: 134 IPLEALI 140
I E +
Sbjct: 73 IDFEEFL 79
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 148 CEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGF 207
E + E+ + F FD D GKI+ + L V +LG+ L T ++ + MI D++GDG
Sbjct: 15 SEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENL-TDEELQEMIDEADRDGDGE 73
Query: 208 VCFEDFSRMM 217
V ++F R+M
Sbjct: 74 VSEQEFLRIM 83
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+++A KL D D G + L+ + LG + T EE++ M+ E DR+GDG +
Sbjct: 18 DTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLTDEELQEMIDEADRDGDGEVSE 76
Query: 137 EALISRVGNSSC 148
+ + + +S
Sbjct: 77 QEFLRIMKKTSL 88
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 111 ADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGK 170
++ T+EE+ D + G I + L RV E + EL+E D D D DG+
Sbjct: 15 SEKDTKEEILKAFKLFDDDETGKISFKNL-KRVAKELGENLTDEELQEMIDEADRDGDGE 73
Query: 171 ITAEELFGVFTK 182
++ +E + K
Sbjct: 74 VSEQEFLRIMKK 85
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 147 SCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDG 206
S E E+ + F FD D+ G IT ++L V +LG+ L T ++ + MIA D+N D
Sbjct: 2 SGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENL-TEEELQEMIAEADRNDDN 60
Query: 207 FVCFEDFSRMM 217
+ ++F R+M
Sbjct: 61 EIDEDEFIRIM 71
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+++A +L D DN G + +L + LG + T+EE++ M++E DR D I
Sbjct: 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELG-ENLTEEELQEMIAEADRNDDNEIDE 64
Query: 137 EALISRVGNSSC 148
+ I + +S
Sbjct: 65 DEFIRIMKKTSL 76
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGD-- 131
S + E +A +L DR DG +L S+ ++ LG +P E +K + + E +
Sbjct: 1 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 60
Query: 132 -----GYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDE 186
++P+ I++ + + C + E FD + +G + E+ V LG++
Sbjct: 61 TLKFEQFLPMMQTIAK----NKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEK 116
Query: 187 LCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 217
+ T ++ ++A ++ +G + +E+ RM+
Sbjct: 117 M-TEEEVEQLVA-GHEDSNGCINYEELVRMV 145
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 153 EPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 212
E EL F FD + DG I EEL + G+ + +D ++ DKN DG + F++
Sbjct: 9 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIE-EDIEDLMKDSDKNNDGRIDFDE 67
Query: 213 FSRMME 218
F +MME
Sbjct: 68 FLKMME 73
Score = 26.9 bits (58), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 111 ADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGK 170
A ++EE+ + D+ DG+I +E L + ++ E E ++++ D ++DG+
Sbjct: 4 AKGKSEEELANCFRIFDKNADGFIDIEEL-GEILRATGEHVIEEDIEDLMKDSDKNNDGR 62
Query: 171 ITAEELF 177
I +E
Sbjct: 63 IDFDEFL 69
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 37.4 bits (85), Expect = 0.006, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFS 214
+L+ F FD D DG IT +EL LG L ++ MI D + DG V +E+F+
Sbjct: 7 DLQVAFRAFDQDGDGHITVDELRRAMAGLGQPL-PQEELDAMIREADVDQDGRVNYEEFA 65
Query: 215 RMM 217
RM+
Sbjct: 66 RML 68
Score = 31.2 bits (69), Expect = 0.41, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLE 137
+L A + D+D DG + EL + LG P QEE+ +M+ E D + DG + E
Sbjct: 7 DLQVAFRAFDQDGDGHITVDELRRAMAGLG-QPLPQEELDAMIREADVDQDGRVNYE 62
Score = 28.5 bits (62), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 117 EEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEEL 176
E+++ D++GDG+I ++ L R +P + EL D D DG++ EE
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDEL-RRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 10/133 (7%)
Query: 82 LVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS 141
L + +D+D GV+ +EL+ L P V+S++S DRE +
Sbjct: 27 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF-- 84
Query: 142 RVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELC-TLDDCRGMIALV 200
+ + + F +D D+ G I EL + G L D +I
Sbjct: 85 -----TGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDI--LIRKF 137
Query: 201 DKNGDGFVCFEDF 213
D+ G G + F+DF
Sbjct: 138 DRQGRGQIAFDDF 150
Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Query: 116 QEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEE 175
Q + ++ VD++ G I L + N + P ++ FD ++ + E
Sbjct: 24 QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSE 83
Query: 176 LFGVFTKLGDE---LCTLD-DCRGMIALVDKN 203
GV+ + D T D D GMI DKN
Sbjct: 84 FTGVWKYITDWQNVFRTYDRDNSGMI---DKN 112
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 7/137 (5%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A +L+D+D DG + ++++ A LG T++E+ SM++E G I +
Sbjct: 58 EFKEAFQLIDQDKDGFISKNDIRATFDSLGR-LCTEQELDSMVAEA----PGPINFTMFL 112
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 200
+ G+ E + F+ FD + DGK E L T G++ + D+ ++
Sbjct: 113 TIFGDRIAGTDEEDVIVNAFNLFD-EGDGKCKEETLKRSLTTWGEKF-SQDEVDQALSEA 170
Query: 201 DKNGDGFVCFEDFSRMM 217
+G+G + + F++++
Sbjct: 171 PIDGNGLIDIKKFAQIL 187
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 10/133 (7%)
Query: 82 LVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS 141
L + +D+D GV+ +EL+ L P V+S++S DRE +
Sbjct: 5 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF-- 62
Query: 142 RVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELC-TLDDCRGMIALV 200
+ + + F +D D+ G I EL + G L D +I
Sbjct: 63 -----TGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDI--LIRKF 115
Query: 201 DKNGDGFVCFEDF 213
D+ G G + F+DF
Sbjct: 116 DRQGRGQIAFDDF 128
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 10/133 (7%)
Query: 82 LVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS 141
L + +D+D GV+ +EL+ L P V+S++S DRE +
Sbjct: 28 LWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF-- 85
Query: 142 RVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELC-TLDDCRGMIALV 200
+ + + F +D D+ G I EL + G L D +I
Sbjct: 86 -----TGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDI--LIRKF 138
Query: 201 DKNGDGFVCFEDF 213
D+ G G + F+DF
Sbjct: 139 DRQGRGQIAFDDF 151
Score = 30.4 bits (67), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 7/94 (7%)
Query: 114 PTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITA 173
P Q + ++ VD++ G I L + N + P ++ FD ++ +
Sbjct: 23 PDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNF 82
Query: 174 EELFGVFTKLGDE---LCTLD-DCRGMIALVDKN 203
E GV+ + D T D D GMI DKN
Sbjct: 83 SEFTGVWKYITDWQNVFRTYDRDNSGMI---DKN 113
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 10/133 (7%)
Query: 82 LVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS 141
L + +D+D GV+ +EL+ L P V+S++S DRE +
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF-- 66
Query: 142 RVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELC-TLDDCRGMIALV 200
+ + + F +D D+ G I EL + G L D +I
Sbjct: 67 -----TGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDI--LIRKF 119
Query: 201 DKNGDGFVCFEDF 213
D+ G G + F+DF
Sbjct: 120 DRQGRGQIAFDDF 132
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 10/133 (7%)
Query: 82 LVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS 141
L + +D+D GV+ +EL+ L P V+S++S DRE +
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF-- 63
Query: 142 RVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELC-TLDDCRGMIALV 200
+ + + F +D D+ G I EL + G L D +I
Sbjct: 64 -----TGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDI--LIRKF 116
Query: 201 DKNGDGFVCFEDF 213
D+ G G + F+DF
Sbjct: 117 DRQGRGQIAFDDF 129
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 152 CEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFE 211
+ EL+E F +D + +G I+ + + + +L DE + +D MI +D +G G V FE
Sbjct: 1 MQQELREAFRLYDKEGNGYISTDVMREILAEL-DETLSSEDLDAMIDEIDADGSGTVDFE 59
Query: 212 DFSRMM 217
+F +M
Sbjct: 60 EFMGVM 65
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 116 QEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEE 175
Q+E++ D+EG+GYI + ++ + E +L D DAD G + EE
Sbjct: 2 QQELREAFRLYDKEGNGYISTD-VMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEE 60
Query: 176 LFGVFTKLGDE 186
GV T GDE
Sbjct: 61 FMGVMTG-GDE 70
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 78 MNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLE 137
M EL +A +L D++ +G + + +L L + + E++ +M+ E+D +G G + E
Sbjct: 1 MQQELREAFRLYDKEGNGYISTDVMREILAEL-DETLSSEDLDAMIDEIDADGSGTVDFE 59
Query: 138 ALI 140
+
Sbjct: 60 EFM 62
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 156 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 213
LK + D D DGK+T EE+ F K G ++ + D NGDG++ E+F
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFFKKHG-----IEKVAEQVMKADANGDGYITLEEF 59
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
KL+D D DG + + E+ + + G + ++ +K+ D GDGYI LE +
Sbjct: 12 KLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKA-----DANGDGYITLEEFL 60
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 88 LLDRDNDGVVLRSELEALLIRLGADPP--TQEEVKSMLSEVDREGDGYIPLEALISRVGN 145
+LD+D DG + EL ++L +D + +E K++++ D++GDG I +E + V
Sbjct: 49 ILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108
Query: 146 S 146
S
Sbjct: 109 S 109
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLD--DCRGMIALVDKNGDGFVCFED 212
++K+ F D D DG I +EL + + L + + ++A DK+GDG + E+
Sbjct: 42 DVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 213 FSRMM 217
FS ++
Sbjct: 102 FSTLV 106
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 16/136 (11%)
Query: 82 LVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS 141
L + +D+D GV+ +EL+ L P V+S++S DRE +
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF-- 66
Query: 142 RVGNSSCEPACEPELKETFDFFDADHDGKITAEE----LFGVFTKLGDELCTLDDCRGMI 197
+ + + F +D D+ G I E L G +L D+ + +I
Sbjct: 67 -----TGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDI-----LI 116
Query: 198 ALVDKNGDGFVCFEDF 213
D+ G G + F+DF
Sbjct: 117 RKFDRQGRGQIAFDDF 132
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 14/134 (10%)
Query: 82 LVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS 141
L + +D+D GV+ +EL+ L P V+S++S DRE +
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF-- 63
Query: 142 RVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFT--KLGDELCTLDDCRGMIAL 199
+ + + F +D D+ G I EL + +L D+ + +I
Sbjct: 64 -----TGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGYRLSDQFHDI-----LIRK 113
Query: 200 VDKNGDGFVCFEDF 213
D+ G G + F+DF
Sbjct: 114 FDRQGRGQIAFDDF 127
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 152 CEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFE 211
E EL + F FD + DG I EEL + G E T DD ++ DKN DG + ++
Sbjct: 8 TEEELSDLFRMFDKNADGYIDLEELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDYD 66
Query: 212 DFSRMM 217
+F M
Sbjct: 67 EFLEFM 72
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 114 PTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITA 173
T+EE+ + D+ DGYI LE L + ++ E E +++E D ++DG+I
Sbjct: 7 KTEEELSDLFRMFDKNADGYIDLEELKIML-QATGETITEDDIEELMKDGDKNNDGRIDY 65
Query: 174 EELF 177
+E
Sbjct: 66 DEFL 69
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 17/153 (11%)
Query: 82 LVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGD--GYIPLEAL 139
L + LDR+ G + R +L+ + L +P ++S + + D G++ + A
Sbjct: 31 LHHRFRALDRNKKGYLSRMDLQQIGA-LAVNPLGDRIIESFFPDGSQRVDFPGFVRVLAH 89
Query: 140 ISRVGNSSCEPA----CEP------ELKETFDFFDADHDGKITAEELFGVFTKLGDELCT 189
V + E EP +L F +D D DGKI+ E+ V + T
Sbjct: 90 FRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVT 149
Query: 190 LDDCRGM----IALVDKNGDGFVCFEDFSRMME 218
+ + + D++GDG V F +F++ +E
Sbjct: 150 EEQLENIADRTVQEADEDGDGAVSFVEFTKSLE 182
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 152 CEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFE 211
E EL + F FD + DG I EEL + G E T DD ++ DKN DG + ++
Sbjct: 3 SEEELSDLFRMFDKNADGYIDLEELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDYD 61
Query: 212 DFSRMM 217
+F M
Sbjct: 62 EFLEFM 67
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 114 PTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITA 173
++EE+ + D+ DGYI LE L + ++ E E +++E D ++DG+I
Sbjct: 2 KSEEELSDLFRMFDKNADGYIDLEELKIML-QATGETITEDDIEELMKDGDKNNDGRIDY 60
Query: 174 EELF 177
+E
Sbjct: 61 DEFL 64
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 152 CEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFE 211
E EL + F FD + DG I EEL + G E T DD ++ DKN DG + ++
Sbjct: 5 SEEELSDLFRMFDKNADGYIDLEELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDYD 63
Query: 212 DFSRMM 217
+F M
Sbjct: 64 EFLEFM 69
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 114 PTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITA 173
++EE+ + D+ DGYI LE L + ++ E E +++E D ++DG+I
Sbjct: 4 KSEEELSDLFRMFDKNADGYIDLEELKIML-QATGETITEDDIEELMKDGDKNNDGRIDY 62
Query: 174 EELF 177
+E
Sbjct: 63 DEFL 66
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A +L D+DND + EL ++ LGA+ PT++++ ++ + D++ G E +
Sbjct: 15 EYKEAFQLFDKDNDNKLTAEELGTVMRALGAN-PTKQKISEIVKDYDKDNSGKFDQETFL 73
Query: 141 S 141
+
Sbjct: 74 T 74
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 153 EPELKETFDFFDADHDGKITAEELFGVFTKLG 184
+ E KE F FD D+D K+TAEEL V LG
Sbjct: 13 QQEYKEAFQLFDKDNDNKLTAEELGTVMRALG 44
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 14/104 (13%)
Query: 122 MLSEVDREGDGYIPLEALISRVGNSSC-EPACEPELKETFDFFDADHDGKITAEELFGVF 180
+ + D +G+G I E + VG S +LK F+ +D + DG IT EE+ +
Sbjct: 134 LFNAFDADGNGAIHFEDFV--VGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIM 191
Query: 181 TKLGD-----------ELCTLDDCRGMIALVDKNGDGFVCFEDF 213
+ D E L+ +D+N DG V ++F
Sbjct: 192 KSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEF 235
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 152 CEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFE 211
E EL + F FD + DG I EEL + G E T DD ++ DKN DG + ++
Sbjct: 13 TEEELSDLFRMFDKNADGYIDLEELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDYD 71
Query: 212 DFSRMM 217
+F M
Sbjct: 72 EFLEFM 77
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 114 PTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITA 173
T+EE+ + D+ DGYI LE L + ++ E E +++E D ++DG+I
Sbjct: 12 KTEEELSDLFRMFDKNADGYIDLEELKIML-QATGETITEDDIEELMKDGDKNNDGRIDY 70
Query: 174 EELF 177
+E
Sbjct: 71 DEFL 74
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 34.7 bits (78), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 5/107 (4%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E+ +A ++D D DG V + +++A+ +LG P +E+ +ML +E G + +
Sbjct: 5 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGR-APDDKELTAML----KEAPGPLNFTMFL 59
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDEL 187
S + E ++ F FD K+ E + + +GD
Sbjct: 60 SIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNF 106
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 5/107 (4%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E+ +A ++D D DG V + +++A+ +LG P +E+ +ML +E G + +
Sbjct: 7 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGR-APDDKELTAML----KEAPGPLNFTMFL 61
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDEL 187
S + E ++ F FD K+ E + + +GD
Sbjct: 62 SIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNF 108
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 5/107 (4%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E+ +A ++D D DG V + +++A+ +LG P +E+ +ML +E G + +
Sbjct: 8 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGR-APDDKELTAML----KEAPGPLNFTMFL 62
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDEL 187
S + E ++ F FD K+ E + + +GD
Sbjct: 63 SIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNF 109
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKL--GDELCTLDDCRGMIALVDKNGDGFVCFED 212
+LKE F D D G I +EL + G + T + + +A D +GDG + E+
Sbjct: 42 QLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEE 101
Query: 213 FSRMME 218
F M++
Sbjct: 102 FQEMVQ 107
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
+S + E+ +A L D + G + EL+ + LG D + E+ +++E DREG+GY
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVK-KPEILELMNEYDREGNGY 59
Query: 134 IPLEALI 140
I + +
Sbjct: 60 IGFDDFL 66
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFS 214
E+KE FD FD + G I EL LG ++ + ++ D+ G+G++ F+DF
Sbjct: 8 EIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKK-PEILELMNEYDREGNGYIGFDDFL 66
Query: 215 RMM 217
+M
Sbjct: 67 DIM 69
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 34.3 bits (77), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 5/107 (4%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E+ +A ++D D DG V + +++A+ +LG P +E+ +ML +E G + +
Sbjct: 8 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGR-APDDKELTAML----KEAPGPLNFTMFL 62
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDEL 187
S + E ++ F FD K+ E + + +GD
Sbjct: 63 SIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNF 109
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 5/107 (4%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E+ +A ++D D DG V + +++A+ +LG P +E+ +ML +E G + +
Sbjct: 19 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGR-APDDKELTAML----KEAPGPLNFTMFL 73
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDEL 187
S + E ++ F FD K+ E + + +GD
Sbjct: 74 SIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNF 120
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 33.9 bits (76), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFS 214
E++E F FD D +G I+ +EL LG + + +I +D +GDG V FE+F
Sbjct: 37 EIREAFKVFDRDGNGFISKQELGTAMRSLG-YMPNEVELEVIIQRLDMDGDGQVDFEEFV 95
Query: 215 RMM 217
++
Sbjct: 96 TLL 98
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 117 EEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEEL 176
EE++ DR+G+G+I + L + + + P E EL+ D D DG++ EE
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMP-NEVELEVIIQRLDMDGDGQVDFEEF 94
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 33.9 bits (76), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 152 CEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFE 211
E EL + F FD + DG I +EL + G E T DD ++ DKN DG + ++
Sbjct: 4 SEEELSDLFRMFDKNADGYIDLDELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDYD 62
Query: 212 DFSRMM 217
+F M
Sbjct: 63 EFLEFM 68
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 114 PTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITA 173
++EE+ + D+ DGYI L+ L + ++ E E +++E D ++DG+I
Sbjct: 3 KSEEELSDLFRMFDKNADGYIDLDELKIML-QATGETITEDDIEELMKDGDKNNDGRIDY 61
Query: 174 EELF 177
+E
Sbjct: 62 DEFL 65
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 33.9 bits (76), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Query: 82 LVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS 141
L + +D D G + EL+A L R+GA+ + E+ + D + G I + I+
Sbjct: 29 LKEXFNXIDADKSGQITFEELKAGLKRVGANLK-ESEILDLXQAADVDNSGTIDYKEFIA 87
Query: 142 RVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVD 201
+ + + E L F +FD D G IT +EL + G E +++ + VD
Sbjct: 88 ATLHLN-KIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEE---LXRDVD 143
Query: 202 KNGDGFVCFEDF 213
++ DG + + +F
Sbjct: 144 QDNDGRIDYNEF 155
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 33.5 bits (75), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 114 PTQEEVKSMLSEVDREGDGYIPLEALI-SRVGNSSCEPACEPELKETFDFFDADHDGKIT 172
P E+V + + + G+ +P E + + G CE + E F FD + G I+
Sbjct: 44 PRNEDVFA-VGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFIS 102
Query: 173 AEELFGVFTKLGDELCTLDDCRGMIALVDKNGD--GFVCFEDFSR 215
EL V T LG+ L +D +I L D D G V +EDF +
Sbjct: 103 GAELRHVLTALGERLSD-EDVDEIIKLTDLQEDLEGNVKYEDFVK 146
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 33.5 bits (75), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 114 PTQEEVKSMLSEVDREGDGYIPLEALI-SRVGNSSCEPACEPELKETFDFFDADHDGKIT 172
P E+V + + + G+ +P E + + G CE + E F FD + G I+
Sbjct: 44 PRNEDVFA-VGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFIS 102
Query: 173 AEELFGVFTKLGDELCTLDDCRGMIALVDKNGD--GFVCFEDFSR 215
EL V T LG+ L +D +I L D D G V +EDF +
Sbjct: 103 GAELRHVLTALGERLSD-EDVDEIIKLTDLQEDLEGNVKYEDFVK 146
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 33.5 bits (75), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 114 PTQEEVKSMLSEVDREGDGYIPLEALI-SRVGNSSCEPACEPELKETFDFFDADHDGKIT 172
P E+V + + + G+ +P E + + G CE + E F FD + G I+
Sbjct: 44 PRNEDVFA-VGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFIS 102
Query: 173 AEELFGVFTKLGDELCTLDDCRGMIALVDKNGD--GFVCFEDFSR 215
EL V T LG+ L +D +I L D D G V +EDF +
Sbjct: 103 GAELRHVLTALGERLSD-EDVDEIIKLTDLQEDLEGNVKYEDFVK 146
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 33.5 bits (75), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 114 PTQEEVKSMLSEVDREGDGYIPLEALI-SRVGNSSCEPACEPELKETFDFFDADHDGKIT 172
P E+V + + + G+ +P E + + G CE + E F FD + G I+
Sbjct: 42 PRNEDVFA-VGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFIS 100
Query: 173 AEELFGVFTKLGDELCTLDDCRGMIALVDKNGD--GFVCFEDFSR 215
EL V T LG+ L +D +I L D D G V +EDF +
Sbjct: 101 GAELRHVLTALGERLSD-EDVDEIIKLTDLQEDLEGNVKYEDFVK 144
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 155 ELKETFDFFDAD-HDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 213
E K FD F D DG I+ +EL V LG + T ++ + MI VD++G G V F++F
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 214 SRMM 217
MM
Sbjct: 78 LVMM 81
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
DG + EL ++ LG +P T EE++ M+ EVD +G G + + +
Sbjct: 33 DGCISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKL--GDELCTLDDCRGMIALVDKNGDGFVCFED 212
++K+ F F D D G + EEL K G T + + ++A D +GDG + E+
Sbjct: 43 QVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEE 102
Query: 213 FSRMM 217
F M+
Sbjct: 103 FQEMV 107
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 87 KLLDRDNDGVVLRSELEALLIRL--GADPPTQEEVKSMLSEVDREGDGYIPLEALISRV 143
+ +D D G + EL+ L + GA T+ E KS+++ D +GDG I E V
Sbjct: 49 RFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEFQEMV 107
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 114 PTQEEVKSMLSEVDREGDGYIPLEALI-SRVGNSSCEPACEPELKETFDFFDADHDGKIT 172
P E+V + + + G+ +P E + + G CE + E F FD + G I+
Sbjct: 41 PRNEDVFA-VGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFIS 99
Query: 173 AEELFGVFTKLGDELCTLDDCRGMIALVDKNGD--GFVCFEDFSR 215
EL V T LG+ L +D +I L D D G V +EDF +
Sbjct: 100 GAELRHVLTALGERLSD-EDVDEIIKLTDLQEDLEGNVKYEDFVK 143
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 152 CEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDD--CRGMIALVDKNGDGFVC 209
+ ++KE F+ D D G I EEL GV L+D + ++A D + DG +
Sbjct: 39 TDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIG 98
Query: 210 FEDFSRMM 217
++F++M+
Sbjct: 99 ADEFAKMV 106
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 109 LGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPA--CEPELKETFDFFDAD 166
+G T +VK + +D++ G+I E L + S + E K D+D
Sbjct: 33 VGLKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSD 92
Query: 167 HDGKITAEEL 176
HDGKI A+E
Sbjct: 93 HDGKIGADEF 102
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 114 PTQEEVKSMLSEVDREGDGYIPLEALI-SRVGNSSCEPACEPELKETFDFFDADHDGKIT 172
P E+V + + + G+ +P E + + G CE + E F FD + G I+
Sbjct: 41 PRNEDVFA-VGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFIS 99
Query: 173 AEELFGVFTKLGDELCTLDDCRGMIALVDKNGD--GFVCFEDFSR 215
EL V T LG+ L +D +I L D D G V +EDF +
Sbjct: 100 GAELRHVLTALGERLSD-EDVDEIIKLTDLQEDLEGNVKYEDFVK 143
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 155 ELKETFDFFD-ADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 213
E K FD F DG I+ +EL V LG T ++ + MI VD++G G V F++F
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQN-PTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 214 SRMM 217
MM
Sbjct: 78 LVMM 81
Score = 30.4 bits (67), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
DG + EL ++ LG +P T EE++ M+ EVD +G G + + +
Sbjct: 33 DGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 155 ELKETFDFFDAD-HDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 213
E K FD F D DG I+ +EL V LG + T ++ + MI VD++G G V F++F
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 214 SRMM 217
MM
Sbjct: 78 LVMM 81
Score = 31.2 bits (69), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
DG + EL ++ LG +P T EE++ M+ EVD +G G + + +
Sbjct: 33 DGCISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 155 ELKETFDFFD-ADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 213
E K FD F DG I+ +EL V LG + T ++ + MI VD++G G V F++F
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 214 SRMM 217
MM
Sbjct: 78 LVMM 81
Score = 30.4 bits (67), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
DG + EL ++ LG +P T EE++ M+ EVD +G G + + +
Sbjct: 33 DGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 155 ELKETFDFFD-ADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 213
E K FD F DG I+ +EL V LG + T ++ + MI VD++G G V F++F
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 214 SRMM 217
MM
Sbjct: 78 LVMM 81
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
DG + EL ++ LG +P T EE++ M+ EVD +G G + + +
Sbjct: 33 DGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 17/111 (15%)
Query: 119 VKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFG 178
V++M D GD I ++ + N E +LK TF +D D +G I +EL
Sbjct: 61 VEAMFRAFDTNGDNTIDFLEYVAAL-NLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLD 119
Query: 179 VFTKL----------------GDELCTLDDCRGMIALVDKNGDGFVCFEDF 213
+ + G L + + LVD+NGDG + +F
Sbjct: 120 IVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEF 170
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 11/74 (14%)
Query: 151 ACEPELKETFDFFDADHDGKITAEELFGVFTKLGD-----------ELCTLDDCRGMIAL 199
+LK F+ +D + DG IT EE+ + + D E +
Sbjct: 6 TVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEK 65
Query: 200 VDKNGDGFVCFEDF 213
+D+N DG V E+F
Sbjct: 66 MDRNQDGVVTIEEF 79
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 22/153 (14%)
Query: 89 LDRDNDGVVLRSELEALL-----IRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRV 143
D D G + EL+ L+ R A E+K+ + + + DG I + L +
Sbjct: 25 FDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVL 84
Query: 144 GNSS-------CE--PACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELC-TLDDC 193
C+ +CE E +T+ +D DH G I EEL L ++ T+DD
Sbjct: 85 PTEENFLLLFRCQQLKSCE-EFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDT 143
Query: 194 R------GMIALVDKNGDGFVCFEDFSRMMELQ 220
+ M+ L D N DG + + +R++ +Q
Sbjct: 144 KLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQ 176
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 5/107 (4%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E+ +A ++D++ DG + ++L+ LG P +E+ +ML +E G + +
Sbjct: 3 EMKEAFTMIDQNRDGFIDINDLKEEFSSLGR-TPDDKELTAML----KEAPGPLNFTMFL 57
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDEL 187
S + E ++ F FD D K+ E + + +GD
Sbjct: 58 SIFSDKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNF 104
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 155 ELKETFDFF-DADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 213
E K FD F DG I+ +EL V LG + T ++ + MI VD++G G V F++F
Sbjct: 19 EFKAAFDIFVQGAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 214 SRMM 217
MM
Sbjct: 78 LVMM 81
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
DG + EL ++ LG +P T EE++ M+ EVD +G G + + +
Sbjct: 33 DGCISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|3LMB|A Chain A, The Crystal Structure Of The Protein Olei01261 With
Unknown Function From Chlorobaculum Tepidum Tls
pdb|3LMB|B Chain B, The Crystal Structure Of The Protein Olei01261 With
Unknown Function From Chlorobaculum Tepidum Tls
Length = 165
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 107 IRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDF 162
IR P +EE+ + +R+G I LEA I N +C EPE K + F
Sbjct: 103 IRAICHAPDEEELANFFDHFERKGKARISLEAAIY---NDACVXKIEPETKPSVKF 155
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
DG + EL ++ LG +P T EE++ M+ EVD +G G + + +
Sbjct: 33 DGCISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFL 78
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 155 ELKETFDFFD-ADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 213
E K FD F DG I+ +EL V LG T ++ + MI VD++G G V F++F
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQN-PTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 214 SRMM 217
MM
Sbjct: 78 LVMM 81
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 12/103 (11%)
Query: 122 MLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFT 181
+ + D + +G + E I + + + +L F+ +D + DG IT EE+ +
Sbjct: 107 LFNAFDTDHNGAVSFEDFIKGL-SILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMK 165
Query: 182 KLGDEL--CTL---------DDCRGMIALVDKNGDGFVCFEDF 213
+ D + CT +DKN DG V ++F
Sbjct: 166 AIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEF 208
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 46/104 (44%), Gaps = 12/104 (11%)
Query: 122 MLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELF---- 177
+ + D DG I I + +S + +L+ F +D D+DG IT E+
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSVTS-RGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVD 126
Query: 178 GVFTKLGDELCTLDD-------CRGMIALVDKNGDGFVCFEDFS 214
++ +G+ + ++ + A++DKN DG + ++F
Sbjct: 127 AIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQ 170
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 34/100 (34%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
+L A KL D DNDG + R+E ML VD A+
Sbjct: 100 KLRWAFKLYDLDNDGYITRNE--------------------MLDIVD----------AIY 129
Query: 141 SRVGNSSCEPACE--PE--LKETFDFFDADHDGKITAEEL 176
VGN+ P E PE + F D + DGK+T +E
Sbjct: 130 QMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEF 169
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 52 RVGTPTSVLHEISGDWSDMSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGA 111
++G L EI + +MS+ + E ++A K DR+ G++ +E+ +L LG
Sbjct: 57 KMGEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLG- 115
Query: 112 DPPTQEEVKSMLS--EVDREGDGYIPLEALISRV 143
+ T+++ + + ++ + DG I E L+ +V
Sbjct: 116 ERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKV 149
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVD--KNGDGFVCFED 212
E E F FD + G I++ E+ V LG E T D C + D ++ DG + +ED
Sbjct: 86 EFMEAFKTFDREGQGLISSAEIRNVLKMLG-ERITEDQCNDIFTFCDIREDIDGNIKYED 144
Query: 213 FSR 215
+
Sbjct: 145 LMK 147
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 30.4 bits (67), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
DG + EL ++ LG +P T EE++ M+ EVD +G G + + +
Sbjct: 33 DGCISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEWL 78
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 155 ELKETFDFFD-ADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 213
E K FD F DG I+ +EL V LG + T ++ + MI VD++G G V F+++
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSGTVDFDEW 77
Query: 214 SRMM 217
MM
Sbjct: 78 LVMM 81
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 30.4 bits (67), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 112 DPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKI 171
D + ++++S LS + D + ++ S VG SS P ++K+ F D D G I
Sbjct: 5 DILSAKDIESALSSC-QAADSF-NYKSFFSTVGLSSKTP---DQIKKVFGILDQDKSGFI 59
Query: 172 TAEELFGVFTK---LGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMME 218
EEL +F K + T + + +A D +GDG + E+F +++
Sbjct: 60 EEEEL-QLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 30.4 bits (67), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
DG + EL ++ LG +P T EE++ M+ EVD +G G + + +
Sbjct: 33 DGCISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEWL 78
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 155 ELKETFDFFD-ADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 213
E K FD F DG I+ +EL V LG T ++ + MI VD++G G V F+++
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQN-PTPEELQEMIDEVDEDGSGTVDFDEW 77
Query: 214 SRMM 217
MM
Sbjct: 78 LVMM 81
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 30.4 bits (67), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 112 DPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKI 171
D + ++++S LS + D + ++ S VG SS P ++K+ F D D G I
Sbjct: 4 DILSAKDIESALSSC-QAADSF-NYKSFFSTVGLSSKTP---DQIKKVFGILDQDKSGFI 58
Query: 172 TAEELFGVFTK---LGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMME 218
EEL +F K + T + + +A D +GDG + E+F +++
Sbjct: 59 EEEEL-QLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 107
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 165 ADHDGKITAEELFGVFTK-------LGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 217
A D +++A EL + K L + +D CR M+A++D + G + FE+F +
Sbjct: 741 AGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLW 800
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 155 ELKETFDFFDADHDGKITAEELFGV----FTKLGDELCTLDDCRGMIALVDKNGDGFVCF 210
ELK F+ +D + DG+++ EEL + F L + TLD+ + +DKNGDG V F
Sbjct: 6 ELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMSTLDE---LFEELDKNGDGEVSF 62
Query: 211 EDFSRMM 217
E+F ++
Sbjct: 63 EEFQVLV 69
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 165 ADHDGKITAEELFGVFTKLGDELC----TLDDCRGMIALVDKNGDGFVCFEDFSRM 216
A DG++ AEEL T+ G +L+ CR MIA++D++ G + F F +
Sbjct: 10 AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKEL 65
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 151 ACE--PELKETFDFFDADHDGKITAEELFGVFTKL-GDELCTLDDCR----GMIALVDKN 203
AC+ EL+ F DA+ DG +TA EL L + + D + +I + DKN
Sbjct: 2 ACKVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKN 61
Query: 204 GDGFVCFEDF 213
DG + E+F
Sbjct: 62 SDGKISKEEF 71
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPP-----TQEEVKSMLSEVDREGDGYIP 135
EL A K LD + DG V EL+ ++ L A +E ++ D+ DG I
Sbjct: 8 ELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKIS 67
Query: 136 LEALISRVGNSSCEPACE 153
E + N++ E C+
Sbjct: 68 KEEFL----NANAELLCQ 81
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 165 ADHDGKITAEELFGVFTKLGDELC----TLDDCRGMIALVDKNGDGFVCFEDFSRM 216
A DG++ AEEL T+ G +L+ CR MIA++D++ G + F F +
Sbjct: 10 AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKEL 65
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 11/74 (14%)
Query: 151 ACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTL-------DDCRGMIAL---- 199
+L+ TF+ +D + DG I EE+ + + D + D R + +
Sbjct: 89 TVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQK 148
Query: 200 VDKNGDGFVCFEDF 213
+DKN DG V ++F
Sbjct: 149 MDKNKDGIVTLDEF 162
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 114 PTQEEVKSMLSEVDREGDGYIPLEALI-SRVGNSSCEPACEPELKETFDFFDADHDGKIT 172
P E+V + + + G+ +P E + + G CE + E F FD + G I+
Sbjct: 45 PRNEDVFA-VGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFIS 103
Query: 173 AEELFGVFTKLGDELCTLDDCRGMIALVDKNGD--GFVCFEDFSR 215
EL V + LG+ L ++ +I L D D G V +E+F +
Sbjct: 104 GAELRHVLSGLGERLSD-EEVDEIINLTDLQEDLEGNVKYEEFVK 147
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLD--DCRGMIALVDKNGDGFVCFED 212
++K+ F D D G I +EL + + L + + ++A DK+GDG + E+
Sbjct: 42 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 213 FSRMM 217
FS ++
Sbjct: 102 FSTLV 106
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 88 LLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLE-------ALI 140
L D ++G++ E L + P +++ D + G+I + A +
Sbjct: 93 LFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATL 152
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEE 175
+ G + + E + +TF+ D HDGKI EE
Sbjct: 153 AESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEE 187
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 114 PTQEEVKSMLSEVDREGDGYIPLEALI-SRVGNSSCEPACEPELKETFDFFDADHDGKIT 172
P E+V + + + G+ +P E + + G CE + E F FD + G I+
Sbjct: 44 PRNEDVFA-VGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFIS 102
Query: 173 AEELFGVFTKLGDELCTLDDCRGMIALVDKNGD--GFVCFEDFSR 215
EL V + LG+ L ++ +I L D D G V +E+F +
Sbjct: 103 GAELRHVLSGLGERLSD-EEVDEIINLTDLQEDLEGNVKYEEFVK 146
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 165 ADHDGKITAEELFGVFTK-------LGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRM 216
A D +++A EL + K L + +D CR M+A++D + G + FE+F +
Sbjct: 25 AGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYL 83
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 155 ELKETFDFFDADH--DGKITAEELFGV----FTKLGDELCTLDDCRGMIALVDKNGDGFV 208
ELK F+ + A +++ EEL + F L TLDD + +DKNGDG V
Sbjct: 8 ELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDD---LFQELDKNGDGEV 64
Query: 209 CFEDFSRMM 217
FE+F ++
Sbjct: 65 SFEEFQVLV 73
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 11/70 (15%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTL-------DDCRGMIAL----VDKN 203
+L+ TF+ +D + DG I EE+ + + D + D R + + +DKN
Sbjct: 126 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKN 185
Query: 204 GDGFVCFEDF 213
DG V ++F
Sbjct: 186 KDGIVTLDEF 195
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 165 ADHDGKITAEELFGVFTK-------LGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRM 216
A D +++A EL + K L + +D CR M+A++D + G + FE+F +
Sbjct: 25 AGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYL 83
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLD--DCRGMIALVDKNGDGFVCFED 212
++K+ F D D G I +EL + + L + + ++A DK+GDG + E+
Sbjct: 6 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 65
Query: 213 FSRMM 217
FS ++
Sbjct: 66 FSTLV 70
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 90 DRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRV 143
D++ DG + E A L LG ++ E ++VD G+G + L+ L++ V
Sbjct: 112 DKNADGQINADEFAAWLTALG---MSKAEAAEAFNQVDTNGNGELSLDELLTAV 162
Score = 26.9 bits (58), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 137 EALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGM 196
E LI G +S P +K D + DG+I A+E T LG + +
Sbjct: 85 ENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG---MSKAEAAEA 141
Query: 197 IALVDKNGDG 206
VD NG+G
Sbjct: 142 FNQVDTNGNG 151
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 165 ADHDGKITAEELFGVFTK-------LGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRM 216
A D +++A EL + K L + +D CR M+A++D + G + FE+F +
Sbjct: 14 AGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYL 72
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/130 (19%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 95 GVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEP 154
GVV + + + + + D G + E ++ + +
Sbjct: 31 GVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTAL-SILLRGTVHE 89
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTL-------DDCRGMIAL----VDKN 203
+L+ TF+ +D + DG I EE+ + + D + D R + + +DKN
Sbjct: 90 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKN 149
Query: 204 GDGFVCFEDF 213
DG V ++F
Sbjct: 150 KDGIVTLDEF 159
>pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1NX0|A Chain A, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX0|B Chain B, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX1|A Chain A, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX1|B Chain B, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX2|A Chain A, Calpain Domain Vi
pdb|1NX3|A Chain A, Calpain Domain Vi In Complex With The Inhibitor Pd150606
Length = 173
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 165 ADHDGKITAEELFGVFTK-------LGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRM 216
A D +++A EL + K L + +D CR M+A++D + G + FE+F +
Sbjct: 14 AGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYL 72
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/130 (19%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 95 GVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEP 154
GVV + + + + + D G + E ++ + +
Sbjct: 31 GVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTAL-SILLRGTVHE 89
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTL-------DDCRGMIAL----VDKN 203
+L+ TF+ +D + DG I EE+ + + D + D R + + +DKN
Sbjct: 90 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKN 149
Query: 204 GDGFVCFEDF 213
DG V ++F
Sbjct: 150 KDGIVTLDEF 159
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 88 LLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLE-------ALI 140
L D ++G++ E L + P +++ D + G+I + A +
Sbjct: 62 LFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATL 121
Query: 141 SRVGNSSCEPACEPELKETFDFFDADHDGKITAEE 175
+ G + + E + +TF+ D HDGKI EE
Sbjct: 122 AESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEE 156
>pdb|1NP8|A Chain A, 18-K C-Terminally Trunucated Small Subunit Of Calpain
pdb|1NP8|B Chain B, 18-K C-Terminally Trunucated Small Subunit Of Calpain
Length = 159
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 165 ADHDGKITAEELFGVFTK-------LGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRM 216
A D +++A EL + K L + +D CR M+A++D + G + FE+F +
Sbjct: 21 AGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYL 79
>pdb|3BGA|A Chain A, Crystal Structure Of Beta-Galactosidase From Bacteroides
Thetaiotaomicron Vpi-5482
pdb|3BGA|B Chain B, Crystal Structure Of Beta-Galactosidase From Bacteroides
Thetaiotaomicron Vpi-5482
Length = 1010
Score = 28.5 bits (62), Expect = 3.1, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Query: 123 LSEVDREGDGYIPLEALISRVGNSSCEPACEPEL-----KETFDF 162
++E++R+G I L+A + VG ++C P P+ K++F+F
Sbjct: 952 INELERDGXITIHLDAEQAGVGTATCGPGVLPQYLVPVKKQSFEF 996
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 145 NSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNG 204
+ S P EL+E F FD D DG I +L +G + T + + ++ N
Sbjct: 1 DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMG-YMPTEMELIELSQQINMNL 59
Query: 205 DGFVCFEDFSRMM 217
G V F+DF +M
Sbjct: 60 GGHVDFDDFVELM 72
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 114 PTQEEVKSMLSEVDREGDGYIPLEALI-SRVGNSSCEPACEPELKETFDFFDADHDGKIT 172
P E+V + + + G+ +P E + + G CE + E F FD + G I+
Sbjct: 44 PRNEDVFA-VGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFIS 102
Query: 173 AEELFGVFTKLGDELCTLDDCRGMIALVDKNGD--GFVCFEDFSR 215
EL V + LG+ L ++ +I L D D G V +E+F +
Sbjct: 103 GAELRHVLSGLGERLSD-EEVDEIINLTDLQEDLEGNVKYEEFVK 146
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVF-----TKLGDE-LCTLDDCRGMIALVDKNGDGFV 208
+L F +D D D KI+ +EL V + DE L ++ D I D++GD +
Sbjct: 114 KLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADR--TIQEADQDGDSAI 171
Query: 209 CFEDFSRMME 218
F +F +++E
Sbjct: 172 SFTEFVKVLE 181
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVF-----TKLGDE-LCTLDDCRGMIALVDKNGDGFV 208
+L F +D D D KI+ +EL V + DE L ++ D I D++GD +
Sbjct: 114 KLHFAFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADR--TIQEADQDGDSAI 171
Query: 209 CFEDFSRMME 218
F +F +++E
Sbjct: 172 SFTEFVKVLE 181
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFS 214
EL FD DA + + EE KL ++D + +DKNG G V F++F+
Sbjct: 131 ELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFA 190
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLD--DCRGMIALVDKNGDGFVCFED 212
++K+ F D D G I +EL + + L + + ++A DK+GDG + E+
Sbjct: 42 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 213 FSRMM 217
FS ++
Sbjct: 102 FSTLV 106
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 187 LCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 217
+ TLD+ + +DKNGDG V FE+F ++
Sbjct: 43 MSTLDE---LFEELDKNGDGEVSFEEFQVLV 70
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 180 FTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 217
F L + TLD+ + +DKNGDG V FE+F ++
Sbjct: 40 FPSLLKGMSTLDE---LFEELDKNGDGEVSFEEFQVLV 74
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
DG + EL + LG +P T EE++ + EVD +G G + + +
Sbjct: 33 DGCISTKELGKVXRXLGQNP-TPEELQEXIDEVDEDGSGTVDFDEFL 78
>pdb|1EV9|A Chain A, Rat Glutathione S-Transferase A1-1 Mutant W21f With Gso3
Bound
pdb|1EV9|C Chain C, Rat Glutathione S-Transferase A1-1 Mutant W21f With Gso3
Bound
pdb|1EV9|D Chain D, Rat Glutathione S-Transferase A1-1 Mutant W21f With Gso3
Bound
Length = 221
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 88 LLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIP 135
L+D ++G++ +L ++++L PP Q+E K+ L++ DR + Y+P
Sbjct: 90 LIDMYSEGIL---DLTEMIMQLVICPPDQKEAKTALAK-DRTKNRYLP 133
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 180 FTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 217
F L + TLD+ + +DKNGDG V FE+F ++
Sbjct: 36 FPSLLKGMSTLDE---LFEELDKNGDGEVSFEEFQVLV 70
>pdb|1VGM|A Chain A, Crystal Structure Of An Isozyme Of Citrate Synthase From
Sulfolbus Tokodaii Strain7
pdb|1VGM|B Chain B, Crystal Structure Of An Isozyme Of Citrate Synthase From
Sulfolbus Tokodaii Strain7
Length = 378
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 14/92 (15%)
Query: 100 SELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNS------SCEPACE 153
S E+ L PTQEE+K+M + + D +P + V +S SC A
Sbjct: 152 SYAESFLAATFGKKPTQEEIKAMDASLILYTDHEVPASTTAALVASSTLSDMYSCIVAAL 211
Query: 154 PELKETFDFFDADHDGKITAEELFGVFTKLGD 185
LK H G AEE F F ++G
Sbjct: 212 AALKGPL------HGG--AAEEAFKQFVEIGS 235
>pdb|1EV4|A Chain A, Rat Glutathione S-transferase A1-1: Mutant W21f/f220y With
Gso3 Bound
pdb|1EV4|C Chain C, Rat Glutathione S-transferase A1-1: Mutant W21f/f220y With
Gso3 Bound
pdb|1EV4|D Chain D, Rat Glutathione S-transferase A1-1: Mutant W21f/f220y With
Gso3 Bound
Length = 221
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 88 LLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIP 135
L+D ++G++ +L ++++L PP Q+E K+ L++ DR + Y+P
Sbjct: 90 LIDMYSEGIL---DLTEMIMQLVICPPDQKEAKTALAK-DRTKNRYLP 133
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 180 FTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 217
F L + TLD+ + +DKNGDG V FE+F ++
Sbjct: 37 FPSLLKGMSTLDE---LFEELDKNGDGEVSFEEFQVLV 71
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 27.3 bits (59), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 157 KETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSR 215
K FDF D + +GKIT +E + +K D++C + A ++ VC E F R
Sbjct: 23 KHMFDFLDINGNGKITLDE---IVSKASDDICA-----KLEATPEQTKRHQVCVEAFFR 73
>pdb|2Z0F|A Chain A, Crystal Structure Of Putative Phosphoglucomutase From
Thermus Thermophilus Hb8
pdb|2Z0F|B Chain B, Crystal Structure Of Putative Phosphoglucomutase From
Thermus Thermophilus Hb8
Length = 524
Score = 27.3 bits (59), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 11/20 (55%)
Query: 152 CEPELKETFDFFDADHDGKI 171
P L TF F DHDGKI
Sbjct: 240 VNPTLDPTFRFMPKDHDGKI 259
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 157 KETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSR 215
K FDF D + +GKIT +E + +K D++C + A ++ VC E F R
Sbjct: 23 KHMFDFLDINGNGKITLDE---IVSKASDDICA-----KLEATPEQTKRHQVCVEAFFR 73
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 157 KETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSR 215
K FDF D + +GKIT +E + +K D++C + A ++ VC E F R
Sbjct: 23 KHMFDFLDINGNGKITLDE---IVSKASDDICA-----KLEATPEQTKRHQVCVEAFFR 73
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 27.3 bits (59), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 187 LCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 217
+ TLD+ + +DKNGDG V FE+F ++
Sbjct: 44 MSTLDE---LFEELDKNGDGEVSFEEFQVLV 71
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 27.3 bits (59), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 82 LVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS 141
L + K++D DN G + EL+ L R+G++ + E+K ++ D + G I I+
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSE-LMESEIKDLMDAADIDKSGTIDYGEFIA 83
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 27.3 bits (59), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 157 KETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSR 215
K FDF D + +GKIT +E + +K D++C + A ++ VC E F R
Sbjct: 23 KHMFDFLDINGNGKITLDE---IVSKASDDICA-----KLEATPEQTKRHQVCVEAFFR 73
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 26.9 bits (58), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 103 EALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGN--SSCEPACEPELKETF 160
+A ++G + ++VK + +D++ G+I + L + N + + E K
Sbjct: 28 KAFFAKVGLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFL 87
Query: 161 DFFDADHDGKITAEEL 176
D+D DGKI +E
Sbjct: 88 KAGDSDGDGKIGVDEF 103
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 26.9 bits (58), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 157 KETFDFFDADHDGKITAEELFGVFTKLGDELCT 189
K FDF D + +GKIT +E + +K D++C
Sbjct: 23 KHMFDFLDINGNGKITLDE---IVSKASDDICA 52
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 26.9 bits (58), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 155 ELKETFDFFDADHDGKITAEELFGVFTKLGDEL--CTLDDCRGMIALVDKNGDGFVCFED 212
++K+ F F D D G + +EL K + T + + ++ D +GDG + ++
Sbjct: 42 QVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADE 101
Query: 213 FSRMM 217
F M+
Sbjct: 102 FQEMV 106
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 26.9 bits (58), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 7/108 (6%)
Query: 112 DPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKI 171
D +++K L V EG + + VG + ++K+ F DAD G I
Sbjct: 5 DLLKADDIKKALDAVKAEGS--FNHKKFFALVG---LKAMSANDVKKVFKAIDADASGFI 59
Query: 172 TAEELFGVFTKLGDELCTLDDC--RGMIALVDKNGDGFVCFEDFSRMM 217
EEL V + L D + + DK+GDG + ++F ++
Sbjct: 60 EEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLV 107
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 26.9 bits (58), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 103 EALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGN--SSCEPACEPELKETF 160
+A ++G + ++VK + +D++ G+I + L + N + + E K
Sbjct: 27 KAFFAKVGLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFL 86
Query: 161 DFFDADHDGKITAEE 175
D+D DGKI +E
Sbjct: 87 KAGDSDGDGKIGVDE 101
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,995,268
Number of Sequences: 62578
Number of extensions: 233395
Number of successful extensions: 1827
Number of sequences better than 100.0: 283
Number of HSP's better than 100.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 764
Number of HSP's gapped (non-prelim): 546
length of query: 221
length of database: 14,973,337
effective HSP length: 95
effective length of query: 126
effective length of database: 9,028,427
effective search space: 1137581802
effective search space used: 1137581802
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.5 bits)