Your job contains 1 sequence.
>027605
MTGKRNQTSPIGSPTSGNISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVS
EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRETEGEKNSM
ARQEDQAANPNPSHAAAAEINKANNSFSSSDNKADFQNFNMGFYSLGAQVAPNSNGEGTR
VMGYGENLGVEAFNLSRIYDNGDGNGGNRSAMAAHVHGVGW
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027605
(221 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2129885 - symbol:NF-YB3 ""nuclear factor Y, su... 489 1.1e-46 1
TAIR|locus:2054095 - symbol:NF-YB7 ""nuclear factor Y, su... 469 1.5e-44 1
TAIR|locus:2168983 - symbol:NF-YB2 ""nuclear factor Y, su... 458 2.2e-43 1
DICTYBASE|DDB_G0279419 - symbol:nfyB "putative histone-li... 412 1.1e-40 2
TAIR|locus:2061789 - symbol:NF-YB8 ""nuclear factor Y, su... 424 8.7e-40 1
TAIR|locus:2083941 - symbol:NF-YB10 ""nuclear factor Y, s... 423 1.1e-39 1
TAIR|locus:2043293 - symbol:NF-YB5 ""nuclear factor Y, su... 389 4.4e-36 1
TAIR|locus:2201163 - symbol:LEC1 "LEAFY COTYLEDON 1" spec... 371 3.6e-34 1
TAIR|locus:2169028 - symbol:NF-YB6 ""nuclear factor Y, su... 368 7.4e-34 1
UNIPROTKB|E1C5G6 - symbol:NFYB "Nuclear transcription fac... 356 1.4e-32 1
UNIPROTKB|P25207 - symbol:NFYB "Nuclear transcription fac... 356 1.4e-32 1
UNIPROTKB|Q32KW0 - symbol:NFYB "Nuclear transcription fac... 356 1.4e-32 1
UNIPROTKB|E2RDU1 - symbol:NFYB "Uncharacterized protein" ... 356 1.4e-32 1
UNIPROTKB|P25208 - symbol:NFYB "Nuclear transcription fac... 356 1.4e-32 1
UNIPROTKB|F1SG36 - symbol:NFYB "Uncharacterized protein" ... 356 1.4e-32 1
MGI|MGI:97317 - symbol:Nfyb "nuclear transcription factor... 356 1.4e-32 1
RGD|3172 - symbol:Nfyb "nuclear transcription factor-Y be... 356 1.4e-32 1
UNIPROTKB|F1M6L1 - symbol:Nfyb "Nuclear transcription fac... 356 1.4e-32 1
UNIPROTKB|H7C5X4 - symbol:Nfyb "Nuclear transcription fac... 356 1.4e-32 1
ZFIN|ZDB-GENE-050306-25 - symbol:nfybb "nuclear transcrip... 353 2.9e-32 1
CGD|CAL0000086 - symbol:HAP31 species:5476 "Candida albic... 352 3.7e-32 1
UNIPROTKB|Q5A6N7 - symbol:HAP31 "Potential histone-like t... 352 3.7e-32 1
ZFIN|ZDB-GENE-050417-13 - symbol:nfyba "nuclear transcrip... 350 6.0e-32 1
TAIR|locus:2036064 - symbol:NF-YB4 ""nuclear factor Y, su... 338 1.1e-30 1
SGD|S000000117 - symbol:HAP3 "Subunit of the Hap2p/3p/4p/... 337 1.4e-30 1
POMBASE|SPAC23C11.08 - symbol:php3 "CCAAT-binding factor ... 329 1.0e-29 1
FB|FBgn0032816 - symbol:Nf-YB "Nuclear factor Y-box B" sp... 319 1.2e-28 1
GENEDB_PFALCIPARUM|PF11_0477 - symbol:PF11_0477 "CCAAT-bo... 319 3.0e-27 1
UNIPROTKB|F8VSL3 - symbol:NFYB "Nuclear transcription fac... 297 2.5e-26 1
WB|WBGene00021132 - symbol:nfyb-1 species:6239 "Caenorhab... 284 5.9e-25 1
DICTYBASE|DDB_G0269638 - symbol:dr1 "putative histone-lik... 192 3.3e-15 1
UNIPROTKB|F1SN88 - symbol:POLE3 "Uncharacterized protein"... 186 1.4e-14 1
UNIPROTKB|Q3SZN5 - symbol:POLE3 "DNA polymerase epsilon s... 185 1.8e-14 1
UNIPROTKB|J9P0Z6 - symbol:POLE3 "Uncharacterized protein"... 185 1.8e-14 1
UNIPROTKB|Q9NRF9 - symbol:POLE3 "DNA polymerase epsilon s... 185 1.8e-14 1
UNIPROTKB|Q5R4W3 - symbol:POLE3 "DNA polymerase epsilon s... 185 1.8e-14 1
MGI|MGI:1933378 - symbol:Pole3 "polymerase (DNA directed)... 185 1.8e-14 1
RGD|1359475 - symbol:Pole3 "polymerase (DNA directed), ep... 185 1.8e-14 1
UNIPROTKB|F1P2L0 - symbol:POLE3 "Uncharacterized protein"... 181 4.9e-14 1
ZFIN|ZDB-GENE-040426-1773 - symbol:pole3 "polymerase (DNA... 174 2.7e-13 1
UNIPROTKB|Q5ZMV3 - symbol:DR1 "Protein Dr1" species:9031 ... 165 2.4e-12 1
UNIPROTKB|Q2KJ19 - symbol:DR1 "Down-regulator of transcri... 165 2.4e-12 1
UNIPROTKB|E2RR45 - symbol:DR1 "Uncharacterized protein" s... 165 2.4e-12 1
UNIPROTKB|Q01658 - symbol:DR1 "Protein Dr1" species:9606 ... 165 2.4e-12 1
MGI|MGI:1100515 - symbol:Dr1 "down-regulator of transcrip... 165 2.4e-12 1
RGD|1305201 - symbol:Dr1 "down-regulator of transcription... 165 2.4e-12 1
UNIPROTKB|F1S534 - symbol:DR1 "Uncharacterized protein" s... 164 3.1e-12 1
FB|FBgn0043002 - symbol:Chrac-14 "Chromatin accessibility... 163 3.9e-12 1
TAIR|locus:2181529 - symbol:NF-YB12 ""nuclear factor Y, s... 163 3.9e-12 1
TAIR|locus:2178307 - symbol:NF-YB13 ""nuclear factor Y, s... 159 1.0e-11 1
ZFIN|ZDB-GENE-061013-797 - symbol:dr1 "down-regulator of ... 159 1.0e-11 1
FB|FBgn0028926 - symbol:NC2beta "Negative Cofactor 2beta"... 157 1.7e-11 1
UNIPROTKB|Q8W0W9 - symbol:Dr1 "Repressor protein" species... 153 1.2e-10 1
CGD|CAL0002303 - symbol:NCB2 species:5476 "Candida albica... 149 1.2e-10 1
UNIPROTKB|Q5A0I6 - symbol:NCB2 "Putative uncharacterized ... 149 1.2e-10 1
UNIPROTKB|G5EHZ6 - symbol:MGCH7_ch7g579 "Negative cofacto... 144 4.1e-10 1
POMBASE|SPBC30D10.02 - symbol:SPBC30D10.02 "transcription... 143 5.2e-10 1
ASPGD|ASPL0000055867 - symbol:AN9358 species:162425 "Emer... 139 1.4e-09 1
DICTYBASE|DDB_G0272222 - symbol:ybl1 "YB-like 1" species:... 133 5.9e-09 1
TAIR|locus:2038648 - symbol:NF-YB11 ""nuclear factor Y, s... 126 3.9e-06 1
WB|WBGene00020823 - symbol:T26A5.8 species:6239 "Caenorha... 101 3.2e-05 1
UNIPROTKB|Q22798 - symbol:T26A5.8 "Protein T26A5.8" speci... 101 3.2e-05 1
ASPGD|ASPL0000061732 - symbol:AN1225 species:162425 "Emer... 114 0.00012 1
WB|WBGene00001092 - symbol:dro-1 species:6239 "Caenorhabd... 107 0.00024 1
GENEDB_PFALCIPARUM|PF13_0043 - symbol:PF13_0043 "CCAAT-bi... 100 0.00065 1
UNIPROTKB|Q8IEN4 - symbol:PF13_0043 "CCAAT-binding transc... 100 0.00065 1
>TAIR|locus:2129885 [details] [associations]
symbol:NF-YB3 ""nuclear factor Y, subunit B3""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:Z97336 EMBL:AL161539
eggNOG:COG2036 OMA:NDSGGHK HOGENOM:HOG000211832
PANTHER:PTHR11064:SF9 EMBL:AK117818 EMBL:BT003684 IPI:IPI00516812
PIR:G71407 RefSeq:NP_193190.1 UniGene:At.33269
ProteinModelPortal:O23310 SMR:O23310 IntAct:O23310 STRING:O23310
PaxDb:O23310 PRIDE:O23310 EnsemblPlants:AT4G14540.1 GeneID:827101
KEGG:ath:AT4G14540 GeneFarm:5133 TAIR:At4g14540 InParanoid:O23310
PhylomeDB:O23310 ProtClustDB:CLSN2685335 Genevestigator:O23310
GermOnline:AT4G14540 Uniprot:O23310
Length = 161
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 96/116 (82%), Positives = 103/116 (88%)
Query: 12 GSPTSGNISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEAS 71
G GN S +EQDRFLPIANVSRIMKK+LPANAKISK+AKETVQECVSEFISFITGEAS
Sbjct: 10 GHKDGGNASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEAS 69
Query: 72 DKCQREKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRETEGEKNSMA-RQEDQ 126
DKCQREKRKTINGDDLLWAMTTLGFE+YV PLK+YL KYRE EGEK + A RQ D+
Sbjct: 70 DKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTTAGRQGDK 125
>TAIR|locus:2054095 [details] [associations]
symbol:NF-YB7 ""nuclear factor Y, subunit B7""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002685 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AC007063 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 PANTHER:PTHR11064:SF9 EMBL:DQ446491
EMBL:BT025276 IPI:IPI00548512 PIR:F84508 RefSeq:NP_178981.1
UniGene:At.64924 ProteinModelPortal:Q9SIT9 SMR:Q9SIT9 IntAct:Q9SIT9
EnsemblPlants:AT2G13570.1 GeneID:815843 KEGG:ath:AT2G13570
GeneFarm:5137 TAIR:At2g13570 InParanoid:Q9SIT9 OMA:NKEQDRF
PhylomeDB:Q9SIT9 ProtClustDB:CLSN2913036 ArrayExpress:Q9SIT9
Genevestigator:Q9SIT9 Uniprot:Q9SIT9
Length = 215
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 91/124 (73%), Positives = 108/124 (87%)
Query: 7 QTSPIGSPTS----GNISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEF 62
+T+P GSP+S N ++KEQDRFLPIANV RIMKK LP N KISK+AKETVQECVSEF
Sbjct: 17 ETNP-GSPSSKTNNNNNNNKEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEF 75
Query: 63 ISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRETEGEKNSMAR 122
ISF+TGEASDKCQREKRKTINGDD++WA+TTLGFE+YV+PLK+YL KYR+TEGEK + +
Sbjct: 76 ISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEKVNSPK 135
Query: 123 QEDQ 126
Q+ Q
Sbjct: 136 QQQQ 139
>TAIR|locus:2168983 [details] [associations]
symbol:NF-YB2 ""nuclear factor Y, subunit B2""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AB025628 eggNOG:COG2036
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 EMBL:AF385744
EMBL:AY078026 EMBL:Y13724 EMBL:AF250338 IPI:IPI00519534
RefSeq:NP_199575.1 UniGene:At.21494 UniGene:At.71142
ProteinModelPortal:Q9FGJ3 SMR:Q9FGJ3 STRING:Q9FGJ3 PaxDb:Q9FGJ3
PRIDE:Q9FGJ3 EnsemblPlants:AT5G47640.1 GeneID:834815
KEGG:ath:AT5G47640 GeneFarm:5132 TAIR:At5g47640 InParanoid:Q9FGJ3
OMA:YLQRFRE PhylomeDB:Q9FGJ3 ProtClustDB:CLSN2914913
Genevestigator:Q9FGJ3 GermOnline:AT5G47640 Uniprot:Q9FGJ3
Length = 190
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 84/107 (78%), Positives = 99/107 (92%)
Query: 18 NISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQRE 77
++S +EQDRFLPIANVSRIMKK+LPANAKISK+AKET+QECVSEFISF+TGEASDKCQ+E
Sbjct: 22 SLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKE 81
Query: 78 KRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRETEGEKNSMARQE 124
KRKTINGDDLLWAMTTLGFE+YV PLK+YL ++RE EGE+ + R +
Sbjct: 82 KRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGERTGLGRPQ 128
>DICTYBASE|DDB_G0279419 [details] [associations]
symbol:nfyB "putative histone-like transcription
factor" species:44689 "Dictyostelium discoideum" [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 dictyBase:DDB_G0279419 GenomeReviews:CM000152_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006366 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:AAFI02000031 eggNOG:COG2036 GO:GO:0016602
RefSeq:XP_641617.1 HSSP:P25208 ProteinModelPortal:Q54WV0 SMR:Q54WV0
EnsemblProtists:DDB0220099 GeneID:8622023 KEGG:ddi:DDB_G0279419
InParanoid:Q54WV0 OMA:SLHNSGN ProtClustDB:CLSZ2846666
Uniprot:Q54WV0
Length = 490
Score = 412 (150.1 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 78/117 (66%), Positives = 95/117 (81%)
Query: 3 GKRNQTSPIGSPTSGNISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEF 62
G N S + + N D+EQDR+LPIAN+ RIMKK+LP NAK++K+AKETVQ+CVSEF
Sbjct: 28 GSSNNNSGGNANNNNNEGDREQDRYLPIANIIRIMKKALPNNAKVAKDAKETVQDCVSEF 87
Query: 63 ISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRETEGEKNS 119
ISFIT EASDKCQ+EKRKTING+D++ AM +LGFENYV PLK+YL KYRETE N+
Sbjct: 88 ISFITSEASDKCQQEKRKTINGEDIIAAMVSLGFENYVEPLKVYLLKYRETEKNSNN 144
Score = 37 (18.1 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 11/48 (22%), Positives = 20/48 (41%)
Query: 141 NKANNSFSSSDNKADFQNFNMGFYSLGAQVAPNSNGEGTRVMGYGENL 188
N NN+ +S++N + N N + + N N + G +L
Sbjct: 415 NNNNNNNNSNNNNNNNNNNNNNNNNPNNNINNNLNNSSNSLHNSGNSL 462
>TAIR|locus:2061789 [details] [associations]
symbol:NF-YB8 ""nuclear factor Y, subunit B8""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036 EMBL:AC006260
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 EMBL:AY070477
EMBL:AY091673 IPI:IPI00541270 PIR:A84788 RefSeq:NP_001031500.1
RefSeq:NP_850277.2 RefSeq:NP_973617.1 UniGene:At.28391
ProteinModelPortal:Q8VYK4 SMR:Q8VYK4 EnsemblPlants:AT2G37060.1
EnsemblPlants:AT2G37060.2 EnsemblPlants:AT2G37060.3 GeneID:818282
KEGG:ath:AT2G37060 GeneFarm:5138 TAIR:At2g37060 InParanoid:Q8VYK4
OMA:GCGSHES PhylomeDB:Q8VYK4 ProtClustDB:CLSN2681248
Genevestigator:Q8VYK4 GermOnline:AT2G37060 Uniprot:Q8VYK4
Length = 173
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 81/113 (71%), Positives = 95/113 (84%)
Query: 13 SPTSGNISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASD 72
SP S ++ +EQDRFLPIAN+SRIMK+ LPAN KI+K+AKE VQECVSEFISF+T EASD
Sbjct: 22 SPRSLHV--REQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVTSEASD 79
Query: 73 KCQREKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRETEGEKNSMARQED 125
KCQREKRKTINGDDLLWAM TLGFE+Y+ PLK+YL +YRE EG+ A+ D
Sbjct: 80 KCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGDTKGSAKGGD 132
>TAIR|locus:2083941 [details] [associations]
symbol:NF-YB10 ""nuclear factor Y, subunit B10""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AL132966 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 ProtClustDB:CLSN2681248
EMBL:AK176827 IPI:IPI00539611 PIR:T45874 RefSeq:NP_190902.2
UniGene:At.35203 ProteinModelPortal:Q67XJ2 SMR:Q67XJ2 IntAct:Q67XJ2
PaxDb:Q67XJ2 PRIDE:Q67XJ2 EnsemblPlants:AT3G53340.1 GeneID:824502
KEGG:ath:AT3G53340 GeneFarm:5140 TAIR:At3g53340 InParanoid:Q67XJ2
OMA:QKYREVR PhylomeDB:Q67XJ2 Genevestigator:Q67XJ2
GermOnline:AT3G53340 Uniprot:Q67XJ2
Length = 176
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 79/104 (75%), Positives = 92/104 (88%)
Query: 13 SPTSGNISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASD 72
SP S N+ +EQDRFLPIAN+SRIMK+ LP N KI+K+AKET+QECVSEFISF+T EASD
Sbjct: 21 SPRSLNV--REQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASD 78
Query: 73 KCQREKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRETEGE 116
KCQREKRKTINGDDLLWAM TLGFE+Y+ PLK+YL +YRE EG+
Sbjct: 79 KCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGD 122
>TAIR|locus:2043293 [details] [associations]
symbol:NF-YB5 ""nuclear factor Y, subunit B5""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AC005309 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 EMBL:BT003968
EMBL:BT005081 IPI:IPI00540695 PIR:G84919 RefSeq:NP_182302.1
UniGene:At.36317 ProteinModelPortal:O82248 SMR:O82248 IntAct:O82248
STRING:O82248 PRIDE:O82248 EnsemblPlants:AT2G47810.1 GeneID:819393
KEGG:ath:AT2G47810 GeneFarm:5135 TAIR:At2g47810 InParanoid:O82248
OMA:ICWAMAN PhylomeDB:O82248 ProtClustDB:CLSN2913222
Genevestigator:O82248 GermOnline:AT2G47810 Uniprot:O82248
Length = 160
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 72/96 (75%), Positives = 83/96 (86%)
Query: 22 KEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKT 81
KEQDR LPIANV RIMK LPANAK+SKEAKET+QECVSEFISF+TGEASDKC +EKRKT
Sbjct: 50 KEQDRLLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKT 109
Query: 82 INGDDLLWAMTTLGFENYVSPLKIYLNKYRETEGEK 117
+NGDD+ WAM LGF++Y + LK YL++YR EGEK
Sbjct: 110 VNGDDICWAMANLGFDDYAAQLKKYLHRYRVLEGEK 145
>TAIR|locus:2201163 [details] [associations]
symbol:LEC1 "LEAFY COTYLEDON 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0010262 "somatic
embryogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=IMP] [GO:0009785 "blue light signaling pathway"
evidence=IMP] [GO:0045723 "positive regulation of fatty acid
biosynthetic process" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA;IDA;IMP]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045893 GO:GO:0009738 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0010262 GO:GO:0045723 eggNOG:COG2036 GO:GO:0009785
EMBL:AC013482 HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9
EMBL:AB493474 EMBL:BX817269 EMBL:AF036684 IPI:IPI00542473
PIR:G86352 RefSeq:NP_173616.2 UniGene:At.28011
ProteinModelPortal:Q9SFD8 SMR:Q9SFD8 IntAct:Q9SFD8 STRING:Q9SFD8
PaxDb:Q9SFD8 PRIDE:Q9SFD8 EnsemblPlants:AT1G21970.1 GeneID:838800
KEGG:ath:AT1G21970 GeneFarm:5139 TAIR:At1g21970 InParanoid:Q9SFD8
OMA:INGMPAF Genevestigator:Q9SFD8 GermOnline:AT1G21970
Uniprot:Q9SFD8
Length = 238
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 64/103 (62%), Positives = 90/103 (87%)
Query: 22 KEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKT 81
+EQD+++PIANV RIM+K+LP++AKIS +AKET+QECVSE+ISF+TGEA+++CQRE+RKT
Sbjct: 58 REQDQYMPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKT 117
Query: 82 INGDDLLWAMTTLGFENYVSPLKIYLNKYRETEGEKNSMARQE 124
I +D+LWAM+ LGF+NYV PL +++N+YRE E ++ S R E
Sbjct: 118 ITAEDILWAMSKLGFDNYVDPLTVFINRYREIETDRGSALRGE 160
>TAIR|locus:2169028 [details] [associations]
symbol:NF-YB6 ""nuclear factor Y, subunit B6""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0009738 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AB025628 eggNOG:COG2036 HOGENOM:HOG000211832
PANTHER:PTHR11064:SF9 EMBL:AY138461 EMBL:BT004183 IPI:IPI00522576
IPI:IPI00655434 RefSeq:NP_001078727.1 RefSeq:NP_199578.2
UniGene:At.29883 UniGene:At.49140 ProteinModelPortal:Q84W66
SMR:Q84W66 IntAct:Q84W66 STRING:Q84W66 EnsemblPlants:AT5G47670.1
GeneID:834818 KEGG:ath:AT5G47670 GeneFarm:5136 TAIR:At5g47670
InParanoid:Q84W66 OMA:TEYGAYG PhylomeDB:Q84W66
ProtClustDB:CLSN2680471 Genevestigator:Q84W66 GermOnline:AT5G47670
Uniprot:Q84W66
Length = 234
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 66/112 (58%), Positives = 92/112 (82%)
Query: 6 NQTSPIGSPTSGNISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISF 65
NQ + + + +EQDRF+PIANV RIM++ LPA+AKIS ++KET+QECVSE+ISF
Sbjct: 41 NQPNKTSNGGEEECTVREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISF 100
Query: 66 ITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRETEGEK 117
ITGEA+++CQRE+RKTI +D+LWAM+ LGF++Y+ PL +YL++YRE EGE+
Sbjct: 101 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGER 152
>UNIPROTKB|E1C5G6 [details] [associations]
symbol:NFYB "Nuclear transcription factor Y subunit beta"
species:9031 "Gallus gallus" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.20.10
SUPFAM:SSF47113 GeneTree:ENSGT00550000074689 GO:GO:0016602
PANTHER:PTHR11064:SF9 EMBL:AADN02006311 EMBL:AADN02006310
IPI:IPI00596965 Ensembl:ENSGALT00000037650 ArrayExpress:E1C5G6
Uniprot:E1C5G6
Length = 152
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 69/105 (65%), Positives = 90/105 (85%)
Query: 15 TSGNI-SDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDK 73
T+G+ S +EQD +LPIANV+RIMK ++P KI+K+AKE VQECVSEFISFIT EAS++
Sbjct: 43 TNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASER 102
Query: 74 CQREKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRET-EGEK 117
C +EKRKTING+D+L+AM+TLGF++YV PLK+YL K+RE +GEK
Sbjct: 103 CHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 147
>UNIPROTKB|P25207 [details] [associations]
symbol:NFYB "Nuclear transcription factor Y subunit beta"
species:9031 "Gallus gallus" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
GeneTree:ENSGT00550000074689 GO:GO:0016602 HOGENOM:HOG000211832
PANTHER:PTHR11064:SF9 CTD:4801 HOVERGEN:HBG008864 KO:K08065
OMA:KENFREQ OrthoDB:EOG4D52ZM EMBL:AJ719889 EMBL:X59713
IPI:IPI00820911 PIR:S24469 RefSeq:NP_990600.1 UniGene:Gga.1264
ProteinModelPortal:P25207 SMR:P25207 STRING:P25207
Ensembl:ENSGALT00000020762 Ensembl:ENSGALT00000037651 GeneID:396205
KEGG:gga:396205 InParanoid:P25207 NextBio:20816257
ArrayExpress:P25207 Uniprot:P25207
Length = 205
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 69/105 (65%), Positives = 90/105 (85%)
Query: 15 TSGNI-SDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDK 73
T+G+ S +EQD +LPIANV+RIMK ++P KI+K+AKE VQECVSEFISFIT EAS++
Sbjct: 43 TNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASER 102
Query: 74 CQREKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRET-EGEK 117
C +EKRKTING+D+L+AM+TLGF++YV PLK+YL K+RE +GEK
Sbjct: 103 CHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 147
>UNIPROTKB|Q32KW0 [details] [associations]
symbol:NFYB "Nuclear transcription factor Y subunit beta"
species:9913 "Bos taurus" [GO:0070491 "repressing transcription
factor binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0045893 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
GeneTree:ENSGT00550000074689 GO:GO:0016602 PANTHER:PTHR11064:SF9
EMBL:BC109900 IPI:IPI01002647 RefSeq:NP_001073254.1
UniGene:Bt.63176 ProteinModelPortal:Q32KW0 SMR:Q32KW0 STRING:Q32KW0
Ensembl:ENSBTAT00000043454 GeneID:614382 KEGG:bta:614382 CTD:4801
HOVERGEN:HBG008864 InParanoid:Q32KW0 KO:K08065 OMA:KENFREQ
OrthoDB:EOG4D52ZM NextBio:20899084 ArrayExpress:Q32KW0
Uniprot:Q32KW0
Length = 207
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 69/105 (65%), Positives = 90/105 (85%)
Query: 15 TSGNI-SDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDK 73
T+G+ S +EQD +LPIANV+RIMK ++P KI+K+AKE VQECVSEFISFIT EAS++
Sbjct: 45 TNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASER 104
Query: 74 CQREKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRET-EGEK 117
C +EKRKTING+D+L+AM+TLGF++YV PLK+YL K+RE +GEK
Sbjct: 105 CHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 149
>UNIPROTKB|E2RDU1 [details] [associations]
symbol:NFYB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070491 "repressing transcription factor
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0045893 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 GeneTree:ENSGT00550000074689
GO:GO:0016602 PANTHER:PTHR11064:SF9 CTD:4801 KO:K08065 OMA:KENFREQ
EMBL:AAEX03009996 RefSeq:XP_003432091.1 Ensembl:ENSCAFT00000050062
GeneID:475450 KEGG:cfa:475450 NextBio:20851292 Uniprot:E2RDU1
Length = 205
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 69/105 (65%), Positives = 90/105 (85%)
Query: 15 TSGNI-SDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDK 73
T+G+ S +EQD +LPIANV+RIMK ++P KI+K+AKE VQECVSEFISFIT EAS++
Sbjct: 43 TNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASER 102
Query: 74 CQREKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRET-EGEK 117
C +EKRKTING+D+L+AM+TLGF++YV PLK+YL K+RE +GEK
Sbjct: 103 CHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 147
>UNIPROTKB|P25208 [details] [associations]
symbol:NFYB "Nuclear transcription factor Y subunit beta"
species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0016602 "CCAAT-binding
factor complex" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070491 "repressing transcription factor binding" evidence=IPI]
Reactome:REACT_111217 InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0045893 GO:GO:0003677 GO:GO:0043565
EMBL:CH471054 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 GO:GO:0016602 HOGENOM:HOG000211832
PANTHER:PTHR11064:SF9 CTD:4801 HOVERGEN:HBG008864 KO:K08065
OMA:KENFREQ OrthoDB:EOG4D52ZM EMBL:L06145 EMBL:X59710 EMBL:AK291934
EMBL:BC005316 EMBL:BC005317 EMBL:BC007035 IPI:IPI00013217
PIR:S22817 RefSeq:NP_006157.1 UniGene:Hs.84928 PDB:1N1J PDBsum:1N1J
ProteinModelPortal:P25208 SMR:P25208 IntAct:P25208 MINT:MINT-146867
STRING:P25208 PhosphoSite:P25208 DMDM:399193 PaxDb:P25208
PRIDE:P25208 DNASU:4801 Ensembl:ENST00000240055
Ensembl:ENST00000551727 GeneID:4801 KEGG:hsa:4801 UCSC:uc001tkl.1
GeneCards:GC12M104510 HGNC:HGNC:7805 HPA:CAB004211 MIM:189904
neXtProt:NX_P25208 PharmGKB:PA31610 InParanoid:P25208
PhylomeDB:P25208 ChiTaRS:NFYB EvolutionaryTrace:P25208
GenomeRNAi:4801 NextBio:18506 ArrayExpress:P25208 Bgee:P25208
CleanEx:HS_NFYB Genevestigator:P25208 GermOnline:ENSG00000120837
Uniprot:P25208
Length = 207
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 69/105 (65%), Positives = 90/105 (85%)
Query: 15 TSGNI-SDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDK 73
T+G+ S +EQD +LPIANV+RIMK ++P KI+K+AKE VQECVSEFISFIT EAS++
Sbjct: 45 TNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASER 104
Query: 74 CQREKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRET-EGEK 117
C +EKRKTING+D+L+AM+TLGF++YV PLK+YL K+RE +GEK
Sbjct: 105 CHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 149
>UNIPROTKB|F1SG36 [details] [associations]
symbol:NFYB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016602 "CCAAT-binding factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR003956
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685 GO:GO:0045893
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.20.10 SUPFAM:SSF47113
GeneTree:ENSGT00550000074689 GO:GO:0016602 PANTHER:PTHR11064:SF9
CTD:4801 KO:K08065 OMA:KENFREQ EMBL:CU457468 RefSeq:NP_001138402.1
UniGene:Ssc.54110 Ensembl:ENSSSCT00000000919 GeneID:100157587
KEGG:ssc:100157587 ArrayExpress:F1SG36 Uniprot:F1SG36
Length = 207
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 69/105 (65%), Positives = 90/105 (85%)
Query: 15 TSGNI-SDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDK 73
T+G+ S +EQD +LPIANV+RIMK ++P KI+K+AKE VQECVSEFISFIT EAS++
Sbjct: 45 TNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASER 104
Query: 74 CQREKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRET-EGEK 117
C +EKRKTING+D+L+AM+TLGF++YV PLK+YL K+RE +GEK
Sbjct: 105 CHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 149
>MGI|MGI:97317 [details] [associations]
symbol:Nfyb "nuclear transcription factor-Y beta"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=IC] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0016602 "CCAAT-binding factor
complex" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] Reactome:REACT_112621
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
MGI:MGI:97317 GO:GO:0045893 GO:GO:0003677 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 GeneTree:ENSGT00550000074689
GO:GO:0016602 PANTHER:PTHR11064:SF9 CTD:4801 HOVERGEN:HBG008864
KO:K08065 OMA:KENFREQ EMBL:X55316 EMBL:AK010762 EMBL:AK146168
EMBL:BC010719 IPI:IPI00753226 PIR:F38245 RefSeq:NP_035044.1
UniGene:Mm.245998 ProteinModelPortal:P63139 SMR:P63139
STRING:P63139 PhosphoSite:P63139 PRIDE:P63139 DNASU:18045
Ensembl:ENSMUST00000130911 GeneID:18045 KEGG:mmu:18045
UCSC:uc007gjv.1 InParanoid:P63139 NextBio:293161 Bgee:P63139
CleanEx:MM_NFYB Genevestigator:P63139 GermOnline:ENSMUSG00000020248
Uniprot:P63139
Length = 207
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 69/105 (65%), Positives = 90/105 (85%)
Query: 15 TSGNI-SDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDK 73
T+G+ S +EQD +LPIANV+RIMK ++P KI+K+AKE VQECVSEFISFIT EAS++
Sbjct: 45 TNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASER 104
Query: 74 CQREKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRET-EGEK 117
C +EKRKTING+D+L+AM+TLGF++YV PLK+YL K+RE +GEK
Sbjct: 105 CHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 149
>RGD|3172 [details] [associations]
symbol:Nfyb "nuclear transcription factor-Y beta" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0016602 "CCAAT-binding factor complex" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA;ISO] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 RGD:3172 GO:GO:0045893 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
GeneTree:ENSGT00550000074689 GO:GO:0016602 HOGENOM:HOG000211832
PANTHER:PTHR11064:SF9 CTD:4801 HOVERGEN:HBG008864 KO:K08065
OrthoDB:EOG4D52ZM EMBL:M55045 EMBL:BC089791 IPI:IPI00208278
PIR:A23692 RefSeq:NP_113741.1 UniGene:Rn.90077
ProteinModelPortal:P63140 SMR:P63140 DIP:DIP-2660N STRING:P63140
Ensembl:ENSRNOT00000066143 GeneID:25336 KEGG:rno:25336 UCSC:RGD:3172
InParanoid:P63140 NextBio:606231 ArrayExpress:P63140
Genevestigator:P63140 GermOnline:ENSRNOG00000010309 Uniprot:P63140
Length = 207
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 69/105 (65%), Positives = 90/105 (85%)
Query: 15 TSGNI-SDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDK 73
T+G+ S +EQD +LPIANV+RIMK ++P KI+K+AKE VQECVSEFISFIT EAS++
Sbjct: 45 TNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASER 104
Query: 74 CQREKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRET-EGEK 117
C +EKRKTING+D+L+AM+TLGF++YV PLK+YL K+RE +GEK
Sbjct: 105 CHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 149
>UNIPROTKB|F1M6L1 [details] [associations]
symbol:Nfyb "Nuclear transcription factor Y subunit beta"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 RGD:3172 GO:GO:0005634 GO:GO:0006355 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 PANTHER:PTHR11064:SF9
IPI:IPI00949385 Ensembl:ENSRNOT00000067075 ArrayExpress:F1M6L1
Uniprot:F1M6L1
Length = 207
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 69/105 (65%), Positives = 90/105 (85%)
Query: 15 TSGNI-SDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDK 73
T+G+ S +EQD +LPIANV+RIMK ++P KI+K+AKE VQECVSEFISFIT EAS++
Sbjct: 45 TNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASER 104
Query: 74 CQREKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRET-EGEK 117
C +EKRKTING+D+L+AM+TLGF++YV PLK+YL K+RE +GEK
Sbjct: 105 CHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 149
>UNIPROTKB|H7C5X4 [details] [associations]
symbol:Nfyb "Nuclear transcription factor Y subunit beta"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 RGD:3172 GO:GO:0005634 GO:GO:0006355 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 PANTHER:PTHR11064:SF9
ProteinModelPortal:H7C5X4 Ensembl:ENSRNOT00000014122 Uniprot:H7C5X4
Length = 205
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 69/105 (65%), Positives = 90/105 (85%)
Query: 15 TSGNI-SDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDK 73
T+G+ S +EQD +LPIANV+RIMK ++P KI+K+AKE VQECVSEFISFIT EAS++
Sbjct: 43 TNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASER 102
Query: 74 CQREKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRET-EGEK 117
C +EKRKTING+D+L+AM+TLGF++YV PLK+YL K+RE +GEK
Sbjct: 103 CHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 147
>ZFIN|ZDB-GENE-050306-25 [details] [associations]
symbol:nfybb "nuclear transcription factor Y, beta
b" species:7955 "Danio rerio" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR003956
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685 ZFIN:ZDB-GENE-050306-25
GO:GO:0005634 GO:GO:0006355 GO:GO:0043565 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 GeneTree:ENSGT00550000074689
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 HOVERGEN:HBG008864
KO:K08065 OrthoDB:EOG4D52ZM EMBL:BX323444 EMBL:BC090693
IPI:IPI00512171 RefSeq:NP_001013340.1 UniGene:Dr.151645 SMR:Q5CZV3
STRING:Q5CZV3 Ensembl:ENSDART00000067072 GeneID:503744
KEGG:dre:503744 CTD:503744 InParanoid:Q5CZV3 NextBio:20866288
Uniprot:Q5CZV3
Length = 205
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 68/107 (63%), Positives = 89/107 (83%)
Query: 12 GSPTSGNISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEAS 71
G+ + N+ +EQD +LPIANV+RIMK ++P KI+K+AKE VQECVSEFISFIT EAS
Sbjct: 44 GNGSKDNL--REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEAS 101
Query: 72 DKCQREKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRET-EGEK 117
++C +EKRKTING+D+L+AM+TLGF+ YV PLK+YL K+RE +GEK
Sbjct: 102 ERCHQEKRKTINGEDILFAMSTLGFDMYVEPLKLYLQKFREAMKGEK 148
>CGD|CAL0000086 [details] [associations]
symbol:HAP31 species:5476 "Candida albicans" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0071280 "cellular response to copper ion"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0016602 "CCAAT-binding factor complex" evidence=IEA]
[GO:0043457 "regulation of cellular respiration" evidence=IEA]
[GO:0000436 "carbon catabolite activation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000978 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
CGD:CAL0000086 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0071280 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0035690
EMBL:AACQ01000055 EMBL:AACQ01000054 eggNOG:COG2036
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 RefSeq:XP_717380.1
RefSeq:XP_717470.1 ProteinModelPortal:Q5A6N7 SMR:Q5A6N7
STRING:Q5A6N7 GeneID:3640853 GeneID:3640994 KEGG:cal:CaO19.517
KEGG:cal:CaO19.8148 Uniprot:Q5A6N7
Length = 105
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 68/95 (71%), Positives = 81/95 (85%)
Query: 18 NISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQRE 77
+I +EQDR+LPIANV+RIMK +LP AK+SK+AKE +QECVSEFISFIT EASDKC +E
Sbjct: 8 DIELREQDRWLPIANVARIMKNTLPPTAKVSKDAKECMQECVSEFISFITSEASDKCLKE 67
Query: 78 KRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRE 112
KRKTING+D+L++M LGFENY LKIYL KYRE
Sbjct: 68 KRKTINGEDILYSMYDLGFENYAEVLKIYLAKYRE 102
>UNIPROTKB|Q5A6N7 [details] [associations]
symbol:HAP31 "Potential histone-like transcription factor"
species:237561 "Candida albicans SC5314" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0071280 "cellular response to copper ion" evidence=IMP]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
CGD:CAL0000086 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0071280 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0035690
EMBL:AACQ01000055 EMBL:AACQ01000054 eggNOG:COG2036
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 RefSeq:XP_717380.1
RefSeq:XP_717470.1 ProteinModelPortal:Q5A6N7 SMR:Q5A6N7
STRING:Q5A6N7 GeneID:3640853 GeneID:3640994 KEGG:cal:CaO19.517
KEGG:cal:CaO19.8148 Uniprot:Q5A6N7
Length = 105
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 68/95 (71%), Positives = 81/95 (85%)
Query: 18 NISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQRE 77
+I +EQDR+LPIANV+RIMK +LP AK+SK+AKE +QECVSEFISFIT EASDKC +E
Sbjct: 8 DIELREQDRWLPIANVARIMKNTLPPTAKVSKDAKECMQECVSEFISFITSEASDKCLKE 67
Query: 78 KRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRE 112
KRKTING+D+L++M LGFENY LKIYL KYRE
Sbjct: 68 KRKTINGEDILYSMYDLGFENYAEVLKIYLAKYRE 102
>ZFIN|ZDB-GENE-050417-13 [details] [associations]
symbol:nfyba "nuclear transcription factor Y, beta
a" species:7955 "Danio rerio" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR003956
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685 ZFIN:ZDB-GENE-050417-13
GO:GO:0005634 GO:GO:0006355 GO:GO:0043565 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 GeneTree:ENSGT00550000074689
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 HOVERGEN:HBG008864
KO:K08065 OrthoDB:EOG4D52ZM EMBL:FP236856 EMBL:BC092926
IPI:IPI00490399 RefSeq:NP_001017565.1 UniGene:Dr.31402 SMR:Q561X4
Ensembl:ENSDART00000057254 GeneID:550227 KEGG:dre:550227 CTD:550227
InParanoid:Q561X4 OMA:IPQTGKX NextBio:20879490 Uniprot:Q561X4
Length = 204
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 66/97 (68%), Positives = 84/97 (86%)
Query: 22 KEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKT 81
+EQD +LPIANV+RIMK ++P KI+K+AKE VQECVSEFISFIT EAS++C +EKRKT
Sbjct: 51 REQDIYLPIANVARIMKNAVPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 110
Query: 82 INGDDLLWAMTTLGFENYVSPLKIYLNKYRET-EGEK 117
ING+D+L+AM+TLGF+ YV PLK+YL K+RE +GEK
Sbjct: 111 INGEDILFAMSTLGFDMYVEPLKLYLQKFREAMKGEK 147
>TAIR|locus:2036064 [details] [associations]
symbol:NF-YB4 ""nuclear factor Y, subunit B4""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AC000106 eggNOG:COG2036 HOGENOM:HOG000211832
PANTHER:PTHR11064:SF9 EMBL:BT029363 IPI:IPI00522503 PIR:C86222
RefSeq:NP_172377.1 UniGene:At.64828 ProteinModelPortal:O04027
SMR:O04027 IntAct:O04027 EnsemblPlants:AT1G09030.1 GeneID:837424
KEGG:ath:AT1G09030 GeneFarm:5134 TAIR:At1g09030 InParanoid:O04027
OMA:RERTEHN PhylomeDB:O04027 ProtClustDB:CLSN2912861
ArrayExpress:O04027 Genevestigator:O04027 GermOnline:AT1G09030
Uniprot:O04027
Length = 139
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 61/95 (64%), Positives = 79/95 (83%)
Query: 23 EQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTI 82
++DR LPIANV R+MK+ LP+NAKISKEAK+TVQEC +EFISF+T EAS+KC RE RKT+
Sbjct: 3 DEDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTV 62
Query: 83 NGDDLLWAMTTLGFENYVSPLKIYLNKYRETEGEK 117
NGDD+ WA++TLG +NY + +L+KYRE E E+
Sbjct: 63 NGDDIWWALSTLGLDNYADAVGRHLHKYREAERER 97
>SGD|S000000117 [details] [associations]
symbol:HAP3 "Subunit of the Hap2p/3p/4p/5p CCAAT-binding
complex" species:4932 "Saccharomyces cerevisiae" [GO:0016602
"CCAAT-binding factor complex" evidence=IDA;IPI] [GO:0000436
"carbon catabolite activation of transcription from RNA polymerase
II promoter" evidence=IDA] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0043457 "regulation of cellular respiration"
evidence=IMP] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
SGD:S000000117 GO:GO:0043565 GO:GO:0006351 EMBL:BK006936
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036 GO:GO:0043457
GeneTree:ENSGT00550000074689 GO:GO:0000436 GO:GO:0016602
HOGENOM:HOG000211832 OrthoDB:EOG4N33Z8 PANTHER:PTHR11064:SF9
EMBL:M20318 EMBL:X74544 EMBL:Z35782 EMBL:AY558459 PIR:A28123
RefSeq:NP_009532.1 ProteinModelPortal:P13434 SMR:P13434
DIP:DIP-1362N IntAct:P13434 MINT:MINT-567883 STRING:P13434
PaxDb:P13434 EnsemblFungi:YBL021C GeneID:852260 KEGG:sce:YBL021C
CYGD:YBL021c OMA:NYIEPLK NextBio:970850 Genevestigator:P13434
GermOnline:YBL021C Uniprot:P13434
Length = 144
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 62/104 (59%), Positives = 83/104 (79%)
Query: 22 KEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKT 81
+EQDR+LPI NV+R+MK +LP +AK+SK+AKE +QECVSE ISF+T EASD+C +KRKT
Sbjct: 36 REQDRWLPINNVARLMKNTLPPSAKVSKDAKECMQECVSELISFVTSEASDRCAADKRKT 95
Query: 82 INGDDLLWAMTTLGFENYVSPLKIYLNKYRETEGEKNSMARQED 125
ING+D+L ++ LGFENY LKIYL KYR+ + KN + ++D
Sbjct: 96 INGEDILISLHALGFENYAEVLKIYLAKYRQQQALKNQLMYEQD 139
>POMBASE|SPAC23C11.08 [details] [associations]
symbol:php3 "CCAAT-binding factor complex subunit Php3"
species:4896 "Schizosaccharomyces pombe" [GO:0000785 "chromatin"
evidence=NAS] [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=ISO;TAS] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0016602 "CCAAT-binding
factor complex" evidence=ISO] [GO:0031670 "cellular response to
nutrient" evidence=IC] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:1900402 "regulation of carbohydrate
metabolic process by regulation of transcription from RNA
polymerase II promoter" evidence=ISO] InterPro:IPR003956
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685 PomBase:SPAC23C11.08
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0000785 GO:GO:0000978
GO:GO:0001077 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0031670
eggNOG:COG2036 GO:GO:0016602 EMBL:X75072 PIR:S42744
RefSeq:NP_593639.1 ProteinModelPortal:P36611 SMR:P36611
STRING:P36611 EnsemblFungi:SPAC23C11.08.1 GeneID:2542027
KEGG:spo:SPAC23C11.08 HOGENOM:HOG000211832 OMA:XDEDEER
OrthoDB:EOG4N33Z8 NextBio:20803105 GO:GO:1900402
PANTHER:PTHR11064:SF9 Uniprot:P36611
Length = 116
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 64/93 (68%), Positives = 76/93 (81%)
Query: 28 LPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDL 87
LPIANV+RIMK +LP NAKISKEAK+ VQ+CVSEFISF+TGEAS++C +EKRKTI G+D+
Sbjct: 12 LPIANVARIMKSALPENAKISKEAKDCVQDCVSEFISFVTGEASEQCTQEKRKTITGEDV 71
Query: 88 LWAMTTLGFENYVSPLKIYLNKYRETEGEKNSM 120
L A+ TLGFENY LKI L KYRE + SM
Sbjct: 72 LLALNTLGFENYAEVLKISLTKYREQQARSASM 104
>FB|FBgn0032816 [details] [associations]
symbol:Nf-YB "Nuclear factor Y-box B" species:7227
"Drosophila melanogaster" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0016602
"CCAAT-binding factor complex" evidence=ISS] [GO:0006351
"transcription, DNA-dependent" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
GO:GO:0005634 EMBL:AE014134 GO:GO:0043565 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 GeneTree:ENSGT00550000074689
PANTHER:PTHR11064:SF9 HSSP:P25208 EMBL:AY070968 EMBL:AY094930
RefSeq:NP_609997.1 UniGene:Dm.6186 SMR:Q8ST61 IntAct:Q8ST61
MINT:MINT-940508 STRING:Q8ST61 EnsemblMetazoa:FBtr0081289
GeneID:35261 KEGG:dme:Dmel_CG10447 UCSC:CG10447-RA CTD:35261
FlyBase:FBgn0032816 InParanoid:Q8ST61 OMA:LPICNII OrthoDB:EOG4RFJ8X
GenomeRNAi:35261 NextBio:792674 Uniprot:Q8ST61
Length = 156
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 61/103 (59%), Positives = 79/103 (76%)
Query: 17 GNISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQR 76
G I +EQDRFLPI N+ +IMK +P N KI+K+A+E +QECVSEFISFI+ EA ++
Sbjct: 32 GGIMLREQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVA 91
Query: 77 EKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRET-EGEKN 118
E RKT+NGDDLL A + LGF+NYV PL IYL KYRE+ + ++N
Sbjct: 92 ENRKTVNGDDLLVAFSNLGFDNYVEPLSIYLQKYRESNKSDRN 134
>GENEDB_PFALCIPARUM|PF11_0477 [details] [associations]
symbol:PF11_0477 "CCAAT-box DNA binding protein
subunit B" species:5833 "Plasmodium falciparum" [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 PRINTS:PR00615 GO:GO:0005634 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AE014186 HSSP:P25208
RefSeq:XP_001348144.1 ProteinModelPortal:Q8IHQ2 SMR:Q8IHQ2
IntAct:Q8IHQ2 MINT:MINT-1610835 EnsemblProtists:PF11_0477:mRNA
GeneID:811020 KEGG:pfa:PF11_0477 EuPathDB:PlasmoDB:PF3D7_1146600
OMA:TNETNQT Uniprot:Q8IHQ2
Length = 1301
Score = 319 (117.4 bits), Expect = 3.0e-27, P = 3.0e-27
Identities = 58/129 (44%), Positives = 89/129 (68%)
Query: 23 EQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTI 82
+ + LPIAN+SRIMK+ LP +AK++KE+K+ ++ECV+EFI F+T EASD+C REKRKTI
Sbjct: 1129 DSETLLPIANISRIMKRILPGSAKVAKESKDIIRECVTEFIQFLTSEASDRCTREKRKTI 1188
Query: 83 NGDDLLWAMTTLGFENYVSPLKIYLNKYRETEGEKNSMARQEDQXXXXXXXXXXXXEINK 142
NG+D+L++M LGF +Y+ PL YLNK+++ + E N+ ++ ++N
Sbjct: 1189 NGEDILYSMEKLGFNDYIEPLTEYLNKWKQLK-ELNNSNNYHEKKFDNIKKTEESGDLNN 1247
Query: 143 ANNSFSSSD 151
NNS + +
Sbjct: 1248 NNNSVENKN 1256
>UNIPROTKB|F8VSL3 [details] [associations]
symbol:NFYB "Nuclear transcription factor Y subunit beta"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 GO:GO:0006355 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 PANTHER:PTHR11064:SF9
HGNC:HGNC:7805 ChiTaRS:NFYB EMBL:AC089983 IPI:IPI01021893
ProteinModelPortal:F8VSL3 SMR:F8VSL3 Ensembl:ENST00000551446
ArrayExpress:F8VSL3 Bgee:F8VSL3 Uniprot:F8VSL3
Length = 131
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 57/86 (66%), Positives = 75/86 (87%)
Query: 15 TSGNI-SDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDK 73
T+G+ S +EQD +LPIANV+RIMK ++P KI+K+AKE VQECVSEFISFIT EAS++
Sbjct: 46 TNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASER 105
Query: 74 CQREKRKTINGDDLLWAMTTLGFENY 99
C +EKRKTING+D+L+AM+TLGF++Y
Sbjct: 106 CHQEKRKTINGEDILFAMSTLGFDSY 131
>WB|WBGene00021132 [details] [associations]
symbol:nfyb-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 GO:GO:0043565
GO:GO:0005622 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
GeneTree:ENSGT00550000074689 PANTHER:PTHR11064:SF9 HSSP:P25208
EMBL:FO080661 PIR:E88021 RefSeq:NP_493740.1
ProteinModelPortal:O17286 SMR:O17286 DIP:DIP-25261N IntAct:O17286
MINT:MINT-1048257 STRING:O17286 PaxDb:O17286 EnsemblMetazoa:W10D9.4
GeneID:173435 KEGG:cel:CELE_W10D9.4 UCSC:W10D9.4 CTD:173435
WormBase:W10D9.4 InParanoid:O17286 NextBio:879647 Uniprot:O17286
Length = 403
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 54/90 (60%), Positives = 67/90 (74%)
Query: 23 EQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTI 82
+Q+RFLPIANV RIMK + AK++K+AKE QECVSEFISFI EA++ C KRKTI
Sbjct: 61 DQERFLPIANVVRIMKTQMDPQAKLAKDAKECAQECVSEFISFIASEAAEICNITKRKTI 120
Query: 83 NGDDLLWAMTTLGFENYVSPLKIYLNKYRE 112
DDLL AM GF+NY P++I+L KYR+
Sbjct: 121 TADDLLTAMEATGFDNYAEPMRIFLQKYRQ 150
>DICTYBASE|DDB_G0269638 [details] [associations]
symbol:dr1 "putative histone-like transcription
factor" species:44689 "Dictyostelium discoideum" [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 dictyBase:DDB_G0269638 GO:GO:0005634 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006355 GO:GO:0043565 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG5150
PANTHER:PTHR11064:SF8 OMA:NKKTINA RefSeq:XP_646136.1 HSSP:Q01658
ProteinModelPortal:Q55DJ5 STRING:Q55DJ5 EnsemblProtists:DDB0216393
GeneID:8617086 KEGG:ddi:DDB_G0269638 ProtClustDB:CLSZ2729292
Uniprot:Q55DJ5
Length = 178
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 42/143 (29%), Positives = 77/143 (53%)
Query: 17 GNISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQR 76
G+ +DKE + LP A VS+++K+ LP + K S E ++ + EC EFI I+ EA+D C R
Sbjct: 2 GDKNDKEDNLSLPKATVSKLIKEMLPQDVKCSNETRDLILECCVEFIHLISSEANDICGR 61
Query: 77 EKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRETEGEKNSMARQEDQXXXXXXXXXX 136
E+++TI + ++ A+T LGF +Y + +K++ K+ +++ +
Sbjct: 62 EQKRTIAAEHVIKALTELGFSDYTQKVSDVYDKHKLEVSTKSKSSKKFENLGKPTEQLIR 121
Query: 137 XXEI--NKANNSFSSSDNKADFQ 157
++ KA ++F +S Q
Sbjct: 122 EQQLLFAKARSAFQASPEAQQLQ 144
>UNIPROTKB|F1SN88 [details] [associations]
symbol:POLE3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0008622 "epsilon DNA polymerase complex" evidence=IEA]
[GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0043966 KO:K02326 GeneTree:ENSGT00550000074689 OMA:NDSGGHK
EMBL:FP102008 RefSeq:XP_003122132.1 UniGene:Ssc.2548
Ensembl:ENSSSCT00000006024 GeneID:100517450 KEGG:ssc:100517450
Uniprot:F1SN88
Length = 147
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 40/110 (36%), Positives = 69/110 (62%)
Query: 19 ISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREK 78
++++ +D LP A ++RI+K++LP ISKEA+ + S F+ + T A++ + K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPEGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 79 RKTINGDDLLWAMTTLGFENYVSPLKIYLNKYR-ETEGEKN-SMARQEDQ 126
RKT+N D+L AM + F+ +V+PLK L YR E +G+K S +++D+
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKDK 110
>UNIPROTKB|Q3SZN5 [details] [associations]
symbol:POLE3 "DNA polymerase epsilon subunit 3"
species:9913 "Bos taurus" [GO:0008622 "epsilon DNA polymerase
complex" evidence=ISS] [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0043966 eggNOG:COG2036 GO:GO:0008622 GO:GO:0003887 KO:K02326
EMBL:BT030577 EMBL:BC102772 IPI:IPI00716318 RefSeq:NP_001029562.1
UniGene:Bt.27905 HSSP:Q9V444 ProteinModelPortal:Q3SZN5 SMR:Q3SZN5
STRING:Q3SZN5 PRIDE:Q3SZN5 Ensembl:ENSBTAT00000000316 GeneID:510678
KEGG:bta:510678 CTD:54107 GeneTree:ENSGT00550000074689
HOGENOM:HOG000007701 HOVERGEN:HBG060262 InParanoid:Q3SZN5
OMA:NDSGGHK OrthoDB:EOG4TB4CS NextBio:20869563 Uniprot:Q3SZN5
Length = 147
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 40/110 (36%), Positives = 69/110 (62%)
Query: 19 ISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREK 78
++++ +D LP A ++RI+K++LP ISKEA+ + S F+ + T A++ + K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 79 RKTINGDDLLWAMTTLGFENYVSPLKIYLNKYR-ETEGEKN-SMARQEDQ 126
RKT+N D+L AM + F+ +V+PLK L YR E +G+K S +++D+
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKDK 110
>UNIPROTKB|J9P0Z6 [details] [associations]
symbol:POLE3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 GO:GO:0005634 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 KO:K02326 CTD:54107
GeneTree:ENSGT00550000074689 OMA:TALAHKQ EMBL:AAEX03008085
RefSeq:XP_855374.2 Ensembl:ENSCAFT00000047307 GeneID:612550
KEGG:cfa:612550 Uniprot:J9P0Z6
Length = 147
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 40/110 (36%), Positives = 69/110 (62%)
Query: 19 ISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREK 78
++++ +D LP A ++RI+K++LP ISKEA+ + S F+ + T A++ + K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 79 RKTINGDDLLWAMTTLGFENYVSPLKIYLNKYR-ETEGEKN-SMARQEDQ 126
RKT+N D+L AM + F+ +V+PLK L YR E +G+K S +++D+
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKDK 110
>UNIPROTKB|Q9NRF9 [details] [associations]
symbol:POLE3 "DNA polymerase epsilon subunit 3"
species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0008622 "epsilon DNA polymerase
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=TAS]
[GO:0006260 "DNA replication" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0043966 "histone H3 acetylation"
evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IDA] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 GO:GO:0006260 GO:GO:0043565 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966 EMBL:AL137066
eggNOG:COG2036 GO:GO:0008622 GO:GO:0003887 KO:K02326 CTD:54107
HOGENOM:HOG000007701 HOVERGEN:HBG060262 OMA:NDSGGHK
OrthoDB:EOG4TB4CS EMBL:AF226077 EMBL:AF261689 EMBL:AY720898
EMBL:AK074629 EMBL:AK074762 EMBL:AK074782 EMBL:DQ072116
EMBL:BC003166 EMBL:BC004170 IPI:IPI00010141 RefSeq:NP_059139.3
UniGene:Hs.108112 ProteinModelPortal:Q9NRF9 SMR:Q9NRF9
IntAct:Q9NRF9 MINT:MINT-1439872 STRING:Q9NRF9 PhosphoSite:Q9NRF9
DMDM:22653710 PaxDb:Q9NRF9 PeptideAtlas:Q9NRF9 PRIDE:Q9NRF9
Ensembl:ENST00000374169 Ensembl:ENST00000374171 GeneID:54107
KEGG:hsa:54107 UCSC:uc004bhn.2 GeneCards:GC09M116169
HGNC:HGNC:13546 HPA:HPA047945 MIM:607267 neXtProt:NX_Q9NRF9
PharmGKB:PA33499 InParanoid:Q9NRF9 PhylomeDB:Q9NRF9 ChiTaRS:POLE3
GenomeRNAi:54107 NextBio:56470 Bgee:Q9NRF9 CleanEx:HS_POLE3
Genevestigator:Q9NRF9 GermOnline:ENSG00000148229 Uniprot:Q9NRF9
Length = 147
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 40/110 (36%), Positives = 69/110 (62%)
Query: 19 ISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREK 78
++++ +D LP A ++RI+K++LP ISKEA+ + S F+ + T A++ + K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 79 RKTINGDDLLWAMTTLGFENYVSPLKIYLNKYR-ETEGEKN-SMARQEDQ 126
RKT+N D+L AM + F+ +V+PLK L YR E +G+K S +++D+
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKDK 110
>UNIPROTKB|Q5R4W3 [details] [associations]
symbol:POLE3 "DNA polymerase epsilon subunit 3"
species:9601 "Pongo abelii" [GO:0008622 "epsilon DNA polymerase
complex" evidence=ISS] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0005671 GO:GO:0043966 GO:GO:0008622 GO:GO:0003887 KO:K02326
CTD:54107 GeneTree:ENSGT00550000074689 HOVERGEN:HBG060262
OMA:NDSGGHK EMBL:CR861128 RefSeq:NP_001126884.1 UniGene:Pab.18535
ProteinModelPortal:Q5R4W3 SMR:Q5R4W3 PRIDE:Q5R4W3
Ensembl:ENSPPYT00000022775 GeneID:100173898 KEGG:pon:100173898
InParanoid:Q5R4W3 Uniprot:Q5R4W3
Length = 147
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 40/110 (36%), Positives = 69/110 (62%)
Query: 19 ISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREK 78
++++ +D LP A ++RI+K++LP ISKEA+ + S F+ + T A++ + K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 79 RKTINGDDLLWAMTTLGFENYVSPLKIYLNKYR-ETEGEKN-SMARQEDQ 126
RKT+N D+L AM + F+ +V+PLK L YR E +G+K S +++D+
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKDK 110
>MGI|MGI:1933378 [details] [associations]
symbol:Pole3 "polymerase (DNA directed), epsilon 3 (p17
subunit)" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=ISO] [GO:0008622 "epsilon DNA polymerase complex"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 MGI:MGI:1933378
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0043966 eggNOG:COG2036 GO:GO:0008622 GO:GO:0003887 KO:K02326
CTD:54107 GeneTree:ENSGT00550000074689 HOGENOM:HOG000007701
HOVERGEN:HBG060262 OrthoDB:EOG4TB4CS EMBL:AF230806 EMBL:BC024996
IPI:IPI00123264 RefSeq:NP_067473.2 UniGene:Mm.27444
ProteinModelPortal:Q9JKP7 SMR:Q9JKP7 STRING:Q9JKP7
PhosphoSite:Q9JKP7 PaxDb:Q9JKP7 PRIDE:Q9JKP7
Ensembl:ENSMUST00000030091 GeneID:59001 KEGG:mmu:59001
UCSC:uc008tfb.1 InParanoid:Q9JKP7 NextBio:314514 Bgee:Q9JKP7
Genevestigator:Q9JKP7 GermOnline:ENSMUSG00000028394 Uniprot:Q9JKP7
Length = 145
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 41/137 (29%), Positives = 75/137 (54%)
Query: 19 ISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREK 78
++++ +D LP A ++RI+K++LP ISKEA+ + S F+ + T A++ + K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 79 RKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRETE-GEKN-SMARQEDQXXXXXXXXXX 136
RKT+N D+L AM + F+ +++PLK L YR E G+K S +++D+
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFITPLKEALEAYRRDEKGKKEASEQKKKDKDKKDSEEQDK 120
Query: 137 XXEINKANNSFSSSDNK 153
E+ + + D++
Sbjct: 121 SREVEEEDEERLDEDDQ 137
>RGD|1359475 [details] [associations]
symbol:Pole3 "polymerase (DNA directed), epsilon 3, accessory
subunit" species:10116 "Rattus norvegicus" [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=ISO]
[GO:0008622 "epsilon DNA polymerase complex" evidence=ISO;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 RGD:1359475
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
GO:GO:0008622 GO:GO:0003887 KO:K02326 CTD:54107
GeneTree:ENSGT00550000074689 HOGENOM:HOG000007701
HOVERGEN:HBG060262 OMA:NDSGGHK OrthoDB:EOG4TB4CS EMBL:BC081988
EMBL:BC083800 IPI:IPI00208715 RefSeq:NP_001007653.1
RefSeq:XP_002726991.1 RefSeq:XP_002729875.1 UniGene:Rn.3290
ProteinModelPortal:Q642A5 STRING:Q642A5 PRIDE:Q642A5
Ensembl:ENSRNOT00000006416 Ensembl:ENSRNOT00000020722
GeneID:100362333 GeneID:298098 KEGG:rno:100362333 KEGG:rno:298098
UCSC:RGD:1359475 InParanoid:Q642A5 NextBio:643156
Genevestigator:Q642A5 GermOnline:ENSRNOG00000004843
GermOnline:ENSRNOG00000015392 Uniprot:Q642A5
Length = 145
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 40/110 (36%), Positives = 69/110 (62%)
Query: 19 ISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREK 78
++++ +D LP A ++RI+K++LP ISKEA+ + S F+ + T A++ + K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 79 RKTINGDDLLWAMTTLGFENYVSPLKIYLNKYR-ETEGEKN-SMARQEDQ 126
RKT+N D+L AM + F+ +V+PLK L YR E +G+K S +++D+
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKDK 110
>UNIPROTKB|F1P2L0 [details] [associations]
symbol:POLE3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex"
evidence=IEA] [GO:0008622 "epsilon DNA polymerase complex"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966
KO:K02326 CTD:54107 GeneTree:ENSGT00550000074689 OMA:TALAHKQ
EMBL:AADN02026940 IPI:IPI00819486 RefSeq:NP_001020525.2
UniGene:Gga.5487 Ensembl:ENSGALT00000040353 GeneID:417275
KEGG:gga:417275 NextBio:20820605 Uniprot:F1P2L0
Length = 143
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 36/108 (33%), Positives = 64/108 (59%)
Query: 19 ISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREK 78
++++ +D LP A ++RI+K++LP ISKEA+ + S F+ + T A++ + K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 79 RKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRETEGEKNSMARQEDQ 126
RKT+N D+L AM + F+ +++PLK L YR + K + +D+
Sbjct: 61 RKTLNAGDVLSAMEEMEFQRFIAPLKESLEVYRREQKGKKEARKDKDK 108
>ZFIN|ZDB-GENE-040426-1773 [details] [associations]
symbol:pole3 "polymerase (DNA directed), epsilon 3
(p17 subunit)" species:7955 "Danio rerio" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
ZFIN:ZDB-GENE-040426-1773 GO:GO:0005634 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036 KO:K02326
CTD:54107 GeneTree:ENSGT00550000074689 HOGENOM:HOG000007701
HOVERGEN:HBG060262 OrthoDB:EOG4TB4CS OMA:TALAHKQ EMBL:CR925757
EMBL:CR855262 EMBL:BC059666 IPI:IPI00500787 RefSeq:NP_957095.1
UniGene:Dr.76881 STRING:Q6PBL4 Ensembl:ENSDART00000007512
GeneID:393774 KEGG:dre:393774 InParanoid:Q6PBL4 NextBio:20814771
Uniprot:Q6PBL4
Length = 148
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 33/106 (31%), Positives = 63/106 (59%)
Query: 19 ISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREK 78
++++ +D LP A ++RI+K++LP +SKEA+ + + S F+ + T A+ + K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPEGVNVSKEARRAISQAASVFVLYATSCANSFAMKAK 60
Query: 79 RKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRETEGEKNSMARQE 124
RKT+N D++ AM + FE ++ PL+ L Y++ + K + Q+
Sbjct: 61 RKTLNAGDVMSAMEEMEFERFLQPLREALEAYKKGQKGKKEASEQK 106
>UNIPROTKB|Q5ZMV3 [details] [associations]
symbol:DR1 "Protein Dr1" species:9031 "Gallus gallus"
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 PRINTS:PR00615 GO:GO:0006355
GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0005671 GO:GO:0043966 eggNOG:COG5150 HOGENOM:HOG000178641
PANTHER:PTHR11064:SF8 EMBL:AJ719281 IPI:IPI00571608
RefSeq:NP_001008478.1 UniGene:Gga.3162 ProteinModelPortal:Q5ZMV3
SMR:Q5ZMV3 STRING:Q5ZMV3 Ensembl:ENSGALT00000009417 GeneID:424496
KEGG:gga:424496 CTD:1810 GeneTree:ENSGT00550000075010
InParanoid:Q5ZMV3 OMA:NKKTINA OrthoDB:EOG4WM4W5 NextBio:20826822
Uniprot:Q5ZMV3
Length = 176
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 30/90 (33%), Positives = 61/90 (67%)
Query: 20 SDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKR 79
S + D +P A +++++K++LP N +++ +A+E V C +EFI I+ EA++ C + ++
Sbjct: 5 SGNDDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEK 63
Query: 80 KTINGDDLLWAMTTLGFENYVSPLKIYLNK 109
KTI+ + ++ A+ +LGF +Y+S +K L +
Sbjct: 64 KTISPEHVIQALESLGFGSYISEVKEVLQE 93
>UNIPROTKB|Q2KJ19 [details] [associations]
symbol:DR1 "Down-regulator of transcription 1, TBP-binding
(Negative cofactor 2)" species:9913 "Bos taurus" [GO:0043966
"histone H3 acetylation" evidence=IEA] [GO:0017025 "TBP-class
protein binding" evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 InterPro:IPR027113 Pfam:PF00808 PRINTS:PR00615
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0043966 eggNOG:COG5150 HOGENOM:HOG000178641
PANTHER:PTHR11064:SF8 CTD:1810 GeneTree:ENSGT00550000075010
OMA:NKKTINA OrthoDB:EOG4WM4W5 HOVERGEN:HBG002051 EMBL:DAAA02007887
EMBL:BC105564 IPI:IPI00717517 RefSeq:NP_001039984.1
UniGene:Bt.42356 SMR:Q2KJ19 STRING:Q2KJ19
Ensembl:ENSBTAT00000011514 GeneID:613828 KEGG:bta:613828
InParanoid:Q2KJ19 NextBio:20898794 Uniprot:Q2KJ19
Length = 176
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 30/90 (33%), Positives = 61/90 (67%)
Query: 20 SDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKR 79
S + D +P A +++++K++LP N +++ +A+E V C +EFI I+ EA++ C + ++
Sbjct: 5 SGNDDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEK 63
Query: 80 KTINGDDLLWAMTTLGFENYVSPLKIYLNK 109
KTI+ + ++ A+ +LGF +Y+S +K L +
Sbjct: 64 KTISPEHVIQALESLGFGSYISEVKEVLQE 93
>UNIPROTKB|E2RR45 [details] [associations]
symbol:DR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA]
[GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003712 "transcription
cofactor activity" evidence=IEA] InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 PRINTS:PR00615 GO:GO:0043565 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966 PANTHER:PTHR11064:SF8
CTD:1810 GeneTree:ENSGT00550000075010 OMA:NKKTINA EMBL:AAEX03004819
RefSeq:XP_537068.1 ProteinModelPortal:E2RR45
Ensembl:ENSCAFT00000032065 GeneID:479943 KEGG:cfa:479943
NextBio:20855049 Uniprot:E2RR45
Length = 176
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 30/90 (33%), Positives = 61/90 (67%)
Query: 20 SDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKR 79
S + D +P A +++++K++LP N +++ +A+E V C +EFI I+ EA++ C + ++
Sbjct: 5 SGNDDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEK 63
Query: 80 KTINGDDLLWAMTTLGFENYVSPLKIYLNK 109
KTI+ + ++ A+ +LGF +Y+S +K L +
Sbjct: 64 KTISPEHVIQALESLGFGSYISEVKEVLQE 93
>UNIPROTKB|Q01658 [details] [associations]
symbol:DR1 "Protein Dr1" species:9606 "Homo sapiens"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0017025 "TBP-class protein binding" evidence=IDA] [GO:0043966
"histone H3 acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 PRINTS:PR00615 GO:GO:0003714 GO:GO:0003677
GO:GO:0043565 GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966 GO:GO:0017025 PDB:1JFI
PDBsum:1JFI eggNOG:COG5150 HOGENOM:HOG000178641
PANTHER:PTHR11064:SF8 CTD:1810 OMA:NKKTINA OrthoDB:EOG4WM4W5
EMBL:M97388 EMBL:BT006972 EMBL:AL137159 EMBL:BC002809 EMBL:BC035507
EMBL:BC068553 IPI:IPI00008991 PIR:A43320 RefSeq:NP_001929.1
UniGene:Hs.348418 ProteinModelPortal:Q01658 SMR:Q01658
IntAct:Q01658 MINT:MINT-204839 STRING:Q01658 PhosphoSite:Q01658
DMDM:401162 PaxDb:Q01658 PeptideAtlas:Q01658 PRIDE:Q01658
DNASU:1810 Ensembl:ENST00000370267 Ensembl:ENST00000370272
GeneID:1810 KEGG:hsa:1810 UCSC:uc001dpu.3 GeneCards:GC01P093811
HGNC:HGNC:3017 MIM:601482 neXtProt:NX_Q01658 PharmGKB:PA27475
HOVERGEN:HBG002051 InParanoid:Q01658 PhylomeDB:Q01658
EvolutionaryTrace:Q01658 GenomeRNAi:1810 NextBio:7377
ArrayExpress:Q01658 Bgee:Q01658 CleanEx:HS_DR1
Genevestigator:Q01658 GermOnline:ENSG00000117505 Uniprot:Q01658
Length = 176
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 30/90 (33%), Positives = 61/90 (67%)
Query: 20 SDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKR 79
S + D +P A +++++K++LP N +++ +A+E V C +EFI I+ EA++ C + ++
Sbjct: 5 SGNDDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEK 63
Query: 80 KTINGDDLLWAMTTLGFENYVSPLKIYLNK 109
KTI+ + ++ A+ +LGF +Y+S +K L +
Sbjct: 64 KTISPEHVIQALESLGFGSYISEVKEVLQE 93
>MGI|MGI:1100515 [details] [associations]
symbol:Dr1 "down-regulator of transcription 1" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=IEA]
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 PRINTS:PR00615 MGI:MGI:1100515
GO:GO:0005634 GO:GO:0006355 GO:GO:0043565 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966
eggNOG:COG5150 HOGENOM:HOG000178641 PANTHER:PTHR11064:SF8 CTD:1810
GeneTree:ENSGT00550000075010 OMA:NKKTINA OrthoDB:EOG4WM4W5
EMBL:AK031057 EMBL:AK075713 EMBL:AK090113 EMBL:AK139866
EMBL:AK146573 EMBL:BC013461 IPI:IPI00128424 RefSeq:NP_080382.2
UniGene:Mm.303534 ProteinModelPortal:Q91WV0 SMR:Q91WV0
STRING:Q91WV0 PhosphoSite:Q91WV0 PaxDb:Q91WV0 PRIDE:Q91WV0
Ensembl:ENSMUST00000031190 GeneID:13486 KEGG:mmu:13486
UCSC:uc008ynt.1 InParanoid:Q91WV0 NextBio:283989 Bgee:Q91WV0
CleanEx:MM_DR1 Genevestigator:Q91WV0 GermOnline:ENSMUSG00000029265
Uniprot:Q91WV0
Length = 176
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 30/90 (33%), Positives = 61/90 (67%)
Query: 20 SDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKR 79
S + D +P A +++++K++LP N +++ +A+E V C +EFI I+ EA++ C + ++
Sbjct: 5 SGNDDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEK 63
Query: 80 KTINGDDLLWAMTTLGFENYVSPLKIYLNK 109
KTI+ + ++ A+ +LGF +Y+S +K L +
Sbjct: 64 KTISPEHVIQALESLGFGSYISEVKEVLQE 93
>RGD|1305201 [details] [associations]
symbol:Dr1 "down-regulator of transcription 1" species:10116
"Rattus norvegicus" [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 PRINTS:PR00615 RGD:1305201
GO:GO:0006355 GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966 eggNOG:COG5150
HOGENOM:HOG000178641 PANTHER:PTHR11064:SF8 CTD:1810
GeneTree:ENSGT00550000075010 OMA:NKKTINA OrthoDB:EOG4WM4W5
EMBL:BC083822 IPI:IPI00362084 RefSeq:NP_001011914.1
RefSeq:XP_003751365.1 UniGene:Rn.6666 ProteinModelPortal:Q5XI68
SMR:Q5XI68 STRING:Q5XI68 PhosphoSite:Q5XI68 PRIDE:Q5XI68
Ensembl:ENSRNOT00000000080 GeneID:100910207 GeneID:289881
KEGG:rno:100910207 KEGG:rno:289881 UCSC:RGD:1305201
InParanoid:Q5XI68 NextBio:630458 Genevestigator:Q5XI68
GermOnline:ENSRNOG00000000070 Uniprot:Q5XI68
Length = 176
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 30/90 (33%), Positives = 61/90 (67%)
Query: 20 SDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKR 79
S + D +P A +++++K++LP N +++ +A+E V C +EFI I+ EA++ C + ++
Sbjct: 5 SGNDDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEK 63
Query: 80 KTINGDDLLWAMTTLGFENYVSPLKIYLNK 109
KTI+ + ++ A+ +LGF +Y+S +K L +
Sbjct: 64 KTISPEHVIQALESLGFGSYISEVKEVLQE 93
>UNIPROTKB|F1S534 [details] [associations]
symbol:DR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 InterPro:IPR027113 Pfam:PF00808 PRINTS:PR00615
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0043966 PANTHER:PTHR11064:SF8 GeneTree:ENSGT00550000075010
OMA:NKKTINA EMBL:CU469025 RefSeq:XP_001928514.1 UniGene:Ssc.5433
Ensembl:ENSSSCT00000025408 GeneID:100152776 KEGG:ssc:100152776
Uniprot:F1S534
Length = 176
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 29/90 (32%), Positives = 61/90 (67%)
Query: 20 SDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKR 79
S + D +P A +++++K++LP N +++ +A+E V C +EFI ++ EA++ C + ++
Sbjct: 5 SGNDDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLVSSEANEICNKSEK 63
Query: 80 KTINGDDLLWAMTTLGFENYVSPLKIYLNK 109
KTI+ + ++ A+ +LGF +Y+S +K L +
Sbjct: 64 KTISPEHVIQALESLGFGSYISEVKEVLQE 93
>FB|FBgn0043002 [details] [associations]
symbol:Chrac-14 "Chromatin accessibility complex 14kD
protein" species:7227 "Drosophila melanogaster" [GO:0008623 "CHRAC"
evidence=IDA;NAS] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IDA] [GO:0016573 "histone acetylation"
evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 EMBL:AE014134 GO:GO:0043565 GO:GO:0006974
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0042766
GO:GO:0008623 eggNOG:NOG150487 KO:K02326
GeneTree:ENSGT00550000074689 OMA:TALAHKQ UniGene:Dm.3099
EMBL:AY070970 EMBL:AJ271141 RefSeq:NP_476646.2 RefSeq:NP_476647.2
PDB:2BYK PDB:2BYM PDBsum:2BYK PDBsum:2BYM SMR:Q9V444 IntAct:Q9V444
MINT:MINT-781706 STRING:Q9V444 EnsemblMetazoa:FBtr0100267
EnsemblMetazoa:FBtr0100268 GeneID:3772329 KEGG:dme:Dmel_CG13399
UCSC:CG13399-RA CTD:3772329 FlyBase:FBgn0043002 InParanoid:Q9V444
OrthoDB:EOG4RN8S4 EvolutionaryTrace:Q9V444 GenomeRNAi:3772329
NextBio:853337 Uniprot:Q9V444
Length = 128
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 36/106 (33%), Positives = 60/106 (56%)
Query: 21 DKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRK 80
++ +D LP A + R++K++LP +A +SKEA+ + S F F+T ++ ++ K
Sbjct: 3 ERIEDLNLPNAVIGRLIKEALPESASVSKEARAAIARAASVFAIFVTSSSTALAHKQNHK 62
Query: 81 TINGDDLLWAMTTLGFENYVSPLKIYLNKYRETEGEKN-SMARQED 125
TI D+L +T L FE++V L L YR+ EK S A ++D
Sbjct: 63 TITAKDILQTLTELDFESFVPSLTQDLEVYRKVVKEKKESKASKKD 108
>TAIR|locus:2181529 [details] [associations]
symbol:NF-YB12 ""nuclear factor Y, subunit B12""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.20.10 SUPFAM:SSF47113
HOGENOM:HOG000178641 ProtClustDB:CLSN2719282 PANTHER:PTHR11064:SF8
HSSP:Q01658 EMBL:AF428400 EMBL:AY087017 EMBL:AY125544 EMBL:AK227164
IPI:IPI00535830 RefSeq:NP_568190.1 UniGene:At.23541
ProteinModelPortal:Q944I5 PRIDE:Q944I5 EnsemblPlants:AT5G08190.1
GeneID:830715 KEGG:ath:AT5G08190 TAIR:At5g08190 InParanoid:Q944I5
OMA:EVCNKED PhylomeDB:Q944I5 Genevestigator:Q944I5 Uniprot:Q944I5
Length = 163
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 32/104 (30%), Positives = 65/104 (62%)
Query: 19 ISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREK 78
+ ++D LP A +++I+K+ LPA+ +++++A++ + EC EFI+ I+ E+++ C +E
Sbjct: 7 VGKSKEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLISSESNEVCNKED 66
Query: 79 RKTINGDDLLWAMTTLGFENYVSPL-KIY-LNKYRETEGEKNSM 120
++TI + +L A+ LGF YV + Y +KY + + S+
Sbjct: 67 KRTIAPEHVLKALQVLGFGEYVEEVYAAYEQHKYETMQDSQRSV 110
>TAIR|locus:2178307 [details] [associations]
symbol:NF-YB13 ""nuclear factor Y, subunit B13""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 EMBL:AB006708 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:D38110 EMBL:AY057709
EMBL:AY116960 IPI:IPI00529408 PIR:S53582 RefSeq:NP_851060.1
RefSeq:NP_851061.1 UniGene:At.270 ProteinModelPortal:P49592
SMR:P49592 STRING:P49592 PaxDb:P49592 PRIDE:P49592
EnsemblPlants:AT5G23090.1 EnsemblPlants:AT5G23090.2 GeneID:832373
KEGG:ath:AT5G23090 TAIR:At5g23090 eggNOG:COG5150
HOGENOM:HOG000178641 InParanoid:P49592 OMA:NDVCNKE PhylomeDB:P49592
ProtClustDB:CLSN2719282 Genevestigator:P49592 PANTHER:PTHR11064:SF8
Uniprot:P49592
Length = 159
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 30/104 (28%), Positives = 64/104 (61%)
Query: 19 ISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREK 78
+ ++D LP A +++I+K+ LP + +++++A++ + EC EFI+ ++ E++D C +E
Sbjct: 7 VGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNKED 66
Query: 79 RKTINGDDLLWAMTTLGFENYVSPL-KIY-LNKYRETEGEKNSM 120
++TI + +L A+ LGF Y+ + Y +KY + + S+
Sbjct: 67 KRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKYETMQDTQRSV 110
>ZFIN|ZDB-GENE-061013-797 [details] [associations]
symbol:dr1 "down-regulator of transcription 1"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 ZFIN:ZDB-GENE-061013-797 GO:GO:0005634 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG5150
HOGENOM:HOG000178641 PANTHER:PTHR11064:SF8 CTD:1810
GeneTree:ENSGT00550000075010 OMA:NKKTINA OrthoDB:EOG4WM4W5
EMBL:BX511118 EMBL:CU929159 EMBL:BC124605 IPI:IPI00800622
RefSeq:NP_001070782.1 RefSeq:XP_003198826.1 UniGene:Dr.115546
SMR:Q08BR1 STRING:Q08BR1 Ensembl:ENSDART00000083401
Ensembl:ENSDART00000127108 Ensembl:ENSDART00000129855
Ensembl:ENSDART00000151060 GeneID:100536903 GeneID:768171
KEGG:dre:100536903 KEGG:dre:768171 InParanoid:Q08BR1
NextBio:20918487 Uniprot:Q08BR1
Length = 176
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 28/90 (31%), Positives = 61/90 (67%)
Query: 20 SDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKR 79
S + D +P A +++++K++LP N +++ +A+E V C +EFI ++ EA++ C + ++
Sbjct: 5 SGNDDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLVSSEANEICNKSEK 63
Query: 80 KTINGDDLLWAMTTLGFENYVSPLKIYLNK 109
KTI+ + ++ A+ +LGF +Y++ +K L +
Sbjct: 64 KTISPEHVINALESLGFGSYIAEVKDVLQE 93
>FB|FBgn0028926 [details] [associations]
symbol:NC2beta "Negative Cofactor 2beta" species:7227
"Drosophila melanogaster" [GO:0017055 "negative regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=NAS] [GO:0017054 "negative cofactor 2 complex"
evidence=NAS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0001075 "RNA
polymerase II core promoter sequence-specific DNA binding
transcription factor activity involved in preinitiation complex
assembly" evidence=IPI] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex"
evidence=IPI] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 EMBL:AE014134 GO:GO:0043565 GO:GO:0045944
GO:GO:0000122 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0042766 GO:GO:0051123 eggNOG:COG5150 PANTHER:PTHR11064:SF8
GeneTree:ENSGT00550000075010 OMA:NKKTINA EMBL:AF302257
EMBL:AY060717 EMBL:DQ138728 RefSeq:NP_609736.1 UniGene:Dm.3397
ProteinModelPortal:Q9VJQ5 SMR:Q9VJQ5 IntAct:Q9VJQ5 MINT:MINT-823185
STRING:Q9VJQ5 PaxDb:Q9VJQ5 EnsemblMetazoa:FBtr0080695 GeneID:34875
KEGG:dme:Dmel_CG4185 UCSC:CG4185-RA CTD:34875 FlyBase:FBgn0028926
InParanoid:Q9VJQ5 OrthoDB:EOG47WM56 PhylomeDB:Q9VJQ5
GenomeRNAi:34875 NextBio:790647 Bgee:Q9VJQ5 GermOnline:CG4185
Uniprot:Q9VJQ5
Length = 183
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 30/98 (30%), Positives = 59/98 (60%)
Query: 20 SDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKR 79
S ++ + LP A++++I+K+ +P +++ E++E + C SEFI I+ EA++ C +
Sbjct: 12 SAEDDELTLPRASINKIIKELVPT-VRVANESRELILNCCSEFIHLISSEANEVCNMRNK 70
Query: 80 KTINGDDLLWAMTTLGFENYVSPLKIYLNKYRETEGEK 117
KTIN + +L A+ LGF +Y + L+ +E ++
Sbjct: 71 KTINAEHVLEALERLGFHDYKQEAEAVLHDCKEVAAKR 108
>UNIPROTKB|Q8W0W9 [details] [associations]
symbol:Dr1 "Repressor protein" species:4530 "Oryza sativa"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003958
InterPro:IPR009072 InterPro:IPR027113 Pfam:PF00808 GO:GO:0005634
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113
PANTHER:PTHR11064:SF8 HSSP:Q01658 EMBL:AF464902
ProteinModelPortal:Q8W0W9 IntAct:Q8W0W9 KEGG:dosa:Os08t0383700-02
Gramene:Q8W0W9 Genevestigator:Q8W0W9 Uniprot:Q8W0W9
Length = 296
Score = 153 (58.9 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 26/86 (30%), Positives = 56/86 (65%)
Query: 19 ISDKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREK 78
+ ++D LP + + +I+K+ LP + +++++A++ + EC EFI+ ++ E+++ C RE
Sbjct: 7 VGKSKEDVSLPKSTMFKIIKEMLPPDVRVARDAQDLLVECCVEFINLLSSESNEVCSRED 66
Query: 79 RKTINGDDLLWAMTTLGFENYVSPLK 104
+KTI + +L A+ LGF Y+ ++
Sbjct: 67 KKTIAPEHVLRALQDLGFREYIEEVQ 92
>CGD|CAL0002303 [details] [associations]
symbol:NCB2 species:5476 "Candida albicans" [GO:0003713
"transcription coactivator activity" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0017054 "negative cofactor 2 complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 CGD:CAL0002303 GO:GO:0005634
GO:GO:0043565 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0035690 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG5150
PANTHER:PTHR11064:SF8 RefSeq:XP_715301.1 RefSeq:XP_715366.1
ProteinModelPortal:Q5A0I6 STRING:Q5A0I6 GeneID:3643028
GeneID:3643067 KEGG:cal:CaO19.13247 KEGG:cal:CaO19.5825
Uniprot:Q5A0I6
Length = 149
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 30/89 (33%), Positives = 56/89 (62%)
Query: 24 QDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTIN 83
+D LP A V +I+ + LP + I+KEA+E + EC EFI ++ +++D ++E +KTI
Sbjct: 10 EDLSLPKATVQKIINEILPKDIGIAKEAREAITECSIEFIMMLSTQSNDIAEKEAKKTIA 69
Query: 84 GDDLLWAMTTLGFENYVSPLKIYLNKYRE 112
D ++ A+ L F+ Y+ + L++++E
Sbjct: 70 SDHVVKALEELDFKIYLDIINKILDEHKE 98
>UNIPROTKB|Q5A0I6 [details] [associations]
symbol:NCB2 "Putative uncharacterized protein NCB2"
species:237561 "Candida albicans SC5314" [GO:0003713 "transcription
coactivator activity" evidence=IMP] [GO:0035690 "cellular response
to drug" evidence=IMP] InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 CGD:CAL0002303 GO:GO:0005634
GO:GO:0043565 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0035690 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG5150
PANTHER:PTHR11064:SF8 RefSeq:XP_715301.1 RefSeq:XP_715366.1
ProteinModelPortal:Q5A0I6 STRING:Q5A0I6 GeneID:3643028
GeneID:3643067 KEGG:cal:CaO19.13247 KEGG:cal:CaO19.5825
Uniprot:Q5A0I6
Length = 149
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 30/89 (33%), Positives = 56/89 (62%)
Query: 24 QDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTIN 83
+D LP A V +I+ + LP + I+KEA+E + EC EFI ++ +++D ++E +KTI
Sbjct: 10 EDLSLPKATVQKIINEILPKDIGIAKEAREAITECSIEFIMMLSTQSNDIAEKEAKKTIA 69
Query: 84 GDDLLWAMTTLGFENYVSPLKIYLNKYRE 112
D ++ A+ L F+ Y+ + L++++E
Sbjct: 70 SDHVVKALEELDFKIYLDIINKILDEHKE 98
>UNIPROTKB|G5EHZ6 [details] [associations]
symbol:MGCH7_ch7g579 "Negative cofactor 2 complex subunit
beta" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003958
InterPro:IPR009072 InterPro:IPR027113 Pfam:PF00808 GO:GO:0003714
GO:GO:0043565 GO:GO:0045944 GO:GO:0000122 GO:GO:0003713
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:CM000230 EMBL:CM001237
PANTHER:PTHR11064:SF8 GO:GO:0017054 RefSeq:XP_003720914.1
ProteinModelPortal:G5EHZ6 EnsemblFungi:MGG_02824T0 GeneID:2682377
KEGG:mgr:MGG_02824 Uniprot:G5EHZ6
Length = 138
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 37/113 (32%), Positives = 60/113 (53%)
Query: 16 SGNISDKEQDRFLPIANVSRIMKKSLPANAKI--SKEAKETVQECVSEFISFITGEASDK 73
S N D LP A V +I+ + LP + I SKEA++ + EC EFI+ I+ EA++
Sbjct: 2 SDNEFGANDDLSLPKATVQKIVSEILPQSDGITYSKEARDLLIECCVEFITLISSEANEI 61
Query: 74 CQREKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRETEGEKNSMARQEDQ 126
+E +KTI D + A+ LGF YV + +++E + + A + +Q
Sbjct: 62 SDKEAKKTIACDHITKALEVLGFSEYVPAVLEAAAEHKEVQKGREKKANKFEQ 114
>POMBASE|SPBC30D10.02 [details] [associations]
symbol:SPBC30D10.02 "transcription corepressor
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=NAS] [GO:0000785 "chromatin" evidence=NAS]
[GO:0003714 "transcription corepressor activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 PomBase:SPBC30D10.02 GO:GO:0005829
GO:GO:0005634 GO:GO:0003714 EMBL:CU329671 GO:GO:0043565
GO:GO:0000785 GenomeReviews:CU329671_GR GO:GO:0000122
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG5150
HOGENOM:HOG000178641 PANTHER:PTHR11064:SF8 OMA:NKKTINA HSSP:Q01658
PIR:T40194 RefSeq:NP_596283.1 ProteinModelPortal:O14348
STRING:O14348 EnsemblFungi:SPBC30D10.02.1 GeneID:2540406
KEGG:spo:SPBC30D10.02 OrthoDB:EOG41NXWS NextBio:20801533
Uniprot:O14348
Length = 161
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 30/94 (31%), Positives = 57/94 (60%)
Query: 28 LPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDL 87
LP A V +++ LP + +KEA++ + EC EFI ++ EA++ C++E +KTI + +
Sbjct: 12 LPKATVQKMVSDILPVDLTFTKEARDLLIECCVEFIHLVSSEANEICEKEAKKTIAAEHI 71
Query: 88 LWAMTTLGFENYVSP-LKIYL-NKYRETEGEKNS 119
+ A+ L F+ Y++ L++ +K ++ EK S
Sbjct: 72 IKALENLEFKEYIAEALEVAAEHKEQQKNREKKS 105
>ASPGD|ASPL0000055867 [details] [associations]
symbol:AN9358 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 GO:GO:0003714 EMBL:BN001308 GO:GO:0043565
GO:GO:0045944 GO:GO:0000122 GO:GO:0003713 Gene3D:1.10.20.10
SUPFAM:SSF47113 PANTHER:PTHR11064:SF8 OMA:NKKTINA GO:GO:0017054
ProteinModelPortal:C8VR63 EnsemblFungi:CADANIAT00001145
Uniprot:C8VR63
Length = 145
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 34/100 (34%), Positives = 59/100 (59%)
Query: 19 ISDKE----QDRFLPIANVSRIMKKSLPANA--KISKEAKETVQECVSEFISFITGEASD 72
+SD+E D LP A V +I+ + LP ++ SK+A++ + EC EFI+ I+ EA+D
Sbjct: 1 MSDREFSSNDDLSLPKATVQKIITEILPPSSGQSFSKDARDLLMECCVEFITLISSEAND 60
Query: 73 KCQREKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRE 112
++E +KTI + + A+ LGF +YV + +++E
Sbjct: 61 ISEKEAKKTIACEHVERALRDLGFGDYVPDVLAVAEEHKE 100
>DICTYBASE|DDB_G0272222 [details] [associations]
symbol:ybl1 "YB-like 1" species:44689 "Dictyostelium
discoideum" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
dictyBase:DDB_G0272222 GO:GO:0005634 GO:GO:0043565
GenomeReviews:CM000151_GR Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AAFI02000008 GO:GO:0003887 eggNOG:NOG150487 KO:K02326
HSSP:Q9V444 RefSeq:XP_645298.1 ProteinModelPortal:Q75JQ9
STRING:Q75JQ9 EnsemblProtists:DDB0216318 GeneID:8618464
KEGG:ddi:DDB_G0272222 OMA:TALAHKQ Uniprot:Q75JQ9
Length = 138
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 42/139 (30%), Positives = 66/139 (47%)
Query: 22 KEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKT 81
+ QD LP A V+RI+K SLP +KE++ + + +I ++T + D R T
Sbjct: 3 ESQD--LPGAIVNRIIKASLPEGVLCAKESRLAIAKAAKVWIHYLTAASIDFSSHSGRST 60
Query: 82 INGDDLLWAMTTLGFENYVSPLKIYL-----NKYRETEGEKNSMARQEDQXXXXXXXXXX 136
I+ D+ A+ + FEN+ L+ YL K +E E EK +E +
Sbjct: 61 ISPKDVFQAIEEIDFENFKPQLEEYLAALKSEKEKEKEKEKEKEKEKEKEKDSNKDDTKS 120
Query: 137 XXEINKAN--NSFSSSDNK 153
E NK++ +S SS D K
Sbjct: 121 KDE-NKSSKKSSSSSKDEK 138
>TAIR|locus:2038648 [details] [associations]
symbol:NF-YB11 ""nuclear factor Y, subunit B11""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AC006232 KO:K02326
OMA:HANEATL HSSP:Q13952 EMBL:BT004083 IPI:IPI00535292 PIR:C84673
RefSeq:NP_180316.1 UniGene:At.26474 UniGene:At.48523
ProteinModelPortal:Q9ZQH2 SMR:Q9ZQH2 PaxDb:Q9ZQH2 PRIDE:Q9ZQH2
EnsemblPlants:AT2G27470.1 GeneID:817292 KEGG:ath:AT2G27470
TAIR:At2g27470 eggNOG:NOG301039 HOGENOM:HOG000154037
InParanoid:Q9ZQH2 PhylomeDB:Q9ZQH2 ProtClustDB:CLSN2913083
ArrayExpress:Q9ZQH2 Genevestigator:Q9ZQH2 Uniprot:Q9ZQH2
Length = 275
Score = 126 (49.4 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 30/99 (30%), Positives = 51/99 (51%)
Query: 28 LPIANVSRIMKKSLPA-----NAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTI 82
LP+A V R++KK L + I KEA E FI +++ A+D C+ +R+T+
Sbjct: 11 LPLAIVRRVVKKKLSECSPDYDVSIHKEALLAFSESARIFIHYLSATANDFCKDARRQTM 70
Query: 83 NGDDLLWAMTTLGFENYVSPLKIYLNKYRETEGEKNSMA 121
DD+ A+ + F ++ PLK L +++ K + A
Sbjct: 71 KADDVFKALEEMDFSEFLEPLKSSLEDFKKKNAGKKAGA 109
>WB|WBGene00020823 [details] [associations]
symbol:T26A5.8 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0035046 "pronuclear migration" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 GO:GO:0009792 GO:GO:0035046
GO:GO:0043565 GO:GO:0005622 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0040027 EMBL:FO080366 PIR:T34387 RefSeq:NP_498421.1
ProteinModelPortal:Q22798 IntAct:Q22798 STRING:Q22798 PaxDb:Q22798
EnsemblMetazoa:T26A5.8 GeneID:175921 KEGG:cel:CELE_T26A5.8
UCSC:T26A5.8 CTD:175921 WormBase:T26A5.8 eggNOG:NOG299395
InParanoid:Q22798 OMA:IVTRLMK NextBio:890318 Uniprot:Q22798
Length = 137
Score = 101 (40.6 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 29/112 (25%), Positives = 59/112 (52%)
Query: 16 SGNISDKEQDRF----LPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEAS 71
S N D+ DR +P A V+R+MK+ N SK+A++ + + F+ ++ ++
Sbjct: 2 SSNDVDQNDDRIAQMMMPAAIVTRLMKED---NISASKDARDVIARAAAVFLINLSDVSA 58
Query: 72 DKCQREKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRETEGEKNSMARQ 123
+ +K KTI+GDD++ + L + + K +K++ +K ++AR+
Sbjct: 59 QSARDQKHKTISGDDVVKGLRELENTSIHNHCKSANDKWKVISQQK-ALARK 109
>UNIPROTKB|Q22798 [details] [associations]
symbol:T26A5.8 "Protein T26A5.8" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
GO:GO:0009792 GO:GO:0035046 GO:GO:0043565 GO:GO:0005622
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0040027 EMBL:FO080366
PIR:T34387 RefSeq:NP_498421.1 ProteinModelPortal:Q22798
IntAct:Q22798 STRING:Q22798 PaxDb:Q22798 EnsemblMetazoa:T26A5.8
GeneID:175921 KEGG:cel:CELE_T26A5.8 UCSC:T26A5.8 CTD:175921
WormBase:T26A5.8 eggNOG:NOG299395 InParanoid:Q22798 OMA:IVTRLMK
NextBio:890318 Uniprot:Q22798
Length = 137
Score = 101 (40.6 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 29/112 (25%), Positives = 59/112 (52%)
Query: 16 SGNISDKEQDRF----LPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEAS 71
S N D+ DR +P A V+R+MK+ N SK+A++ + + F+ ++ ++
Sbjct: 2 SSNDVDQNDDRIAQMMMPAAIVTRLMKED---NISASKDARDVIARAAAVFLINLSDVSA 58
Query: 72 DKCQREKRKTINGDDLLWAMTTLGFENYVSPLKIYLNKYRETEGEKNSMARQ 123
+ +K KTI+GDD++ + L + + K +K++ +K ++AR+
Sbjct: 59 QSARDQKHKTISGDDVVKGLRELENTSIHNHCKSANDKWKVISQQK-ALARK 109
>ASPGD|ASPL0000061732 [details] [associations]
symbol:AN1225 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 GO:GO:0005634 EMBL:BN001308 GO:GO:0043565
EMBL:AACD01000017 Gene3D:1.10.20.10 SUPFAM:SSF47113
eggNOG:NOG150487 OrthoDB:EOG4TQQKQ RefSeq:XP_658829.1
ProteinModelPortal:Q5BE05 EnsemblFungi:CADANIAT00001399
GeneID:2877002 KEGG:ani:AN1225.2 HOGENOM:HOG000207717 OMA:HANEATL
Uniprot:Q5BE05
Length = 280
Score = 114 (45.2 bits), Expect = 0.00012, P = 0.00012
Identities = 26/102 (25%), Positives = 54/102 (52%)
Query: 24 QDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTIN 83
+D LP + R+ K LP N + K+A +Q+ + F+S+++ A++ + +T++
Sbjct: 38 EDYLLPRSITLRLAKSVLPPNTSVQKDAVLAIQKAATVFVSYLSSHANEATLK---RTVS 94
Query: 84 GDDLLWAMTTLGFENYVSPLKIYLNKYRETEGEKNSMARQED 125
D+L A++ L FE + L+ L+K+ + + K + D
Sbjct: 95 PADVLNALSELEFEGFRPRLEKELDKFTDLKAAKRKPRKSGD 136
>WB|WBGene00001092 [details] [associations]
symbol:dro-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 GO:GO:0043565 GO:GO:0005622 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:Z81546 eggNOG:COG5150 HOGENOM:HOG000178641
GeneTree:ENSGT00550000075010 OMA:NKKTINA HSSP:Q01658 PIR:T22529
RefSeq:NP_499750.1 UniGene:Cel.10656 ProteinModelPortal:O45550
SMR:O45550 STRING:O45550 PaxDb:O45550 EnsemblMetazoa:F53A2.5
GeneID:191629 KEGG:cel:CELE_F53A2.5 UCSC:F53A2.5 CTD:191629
WormBase:F53A2.5 InParanoid:O45550 NextBio:949738 Uniprot:O45550
Length = 184
Score = 107 (42.7 bits), Expect = 0.00024, P = 0.00024
Identities = 27/98 (27%), Positives = 53/98 (54%)
Query: 21 DKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRK 80
D++ + LP +++I+K+ +P +I+ E+++ + C EF+ I EA +++RK
Sbjct: 15 DEDNEIGLPQKGINQIIKEVVP-EMRIANESRDMINACCVEFVKHIAREAQRIASQDQRK 73
Query: 81 TINGDDLLWAMTTLGFE-NYVSPLKIYLNKYRETEGEK 117
TI + + A+ LGF +Y+ L+ + E EK
Sbjct: 74 TIYHEHVQKALQNLGFTPDYLEAADSVLDACK-VEAEK 110
>GENEDB_PFALCIPARUM|PF13_0043 [details] [associations]
symbol:PF13_0043 "CCAAT-binding transcription
factor, putative" species:5833 "Plasmodium falciparum" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AL844509 HSSP:P25208
RefSeq:XP_001349808.1 ProteinModelPortal:Q8IEN4
EnsemblProtists:PF13_0043:mRNA GeneID:814022 KEGG:pfa:PF13_0043
EuPathDB:PlasmoDB:PF3D7_1308100 HOGENOM:HOG000280793
ProtClustDB:CLSZ2433133 Uniprot:Q8IEN4
Length = 152
Score = 100 (40.3 bits), Expect = 0.00065, P = 0.00065
Identities = 28/83 (33%), Positives = 42/83 (50%)
Query: 44 NAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVSPL 103
N ++ KEA ET+ +C+S FI +IT A + C+ EKR TI D+L ++ F + L
Sbjct: 37 NYRMRKEALETLGKCLSMFILYITDGAMEYCENEKRSTILVRDILNSLDDSLFLDIHDEL 96
Query: 104 KIYLNKYRETEGEKNSMARQEDQ 126
K L E + S + Q
Sbjct: 97 KRQLTIQEENNKTEISKVSENVQ 119
>UNIPROTKB|Q8IEN4 [details] [associations]
symbol:PF13_0043 "CCAAT-binding transcription factor,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AL844509 HSSP:P25208
RefSeq:XP_001349808.1 ProteinModelPortal:Q8IEN4
EnsemblProtists:PF13_0043:mRNA GeneID:814022 KEGG:pfa:PF13_0043
EuPathDB:PlasmoDB:PF3D7_1308100 HOGENOM:HOG000280793
ProtClustDB:CLSZ2433133 Uniprot:Q8IEN4
Length = 152
Score = 100 (40.3 bits), Expect = 0.00065, P = 0.00065
Identities = 28/83 (33%), Positives = 42/83 (50%)
Query: 44 NAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVSPL 103
N ++ KEA ET+ +C+S FI +IT A + C+ EKR TI D+L ++ F + L
Sbjct: 37 NYRMRKEALETLGKCLSMFILYITDGAMEYCENEKRSTILVRDILNSLDDSLFLDIHDEL 96
Query: 104 KIYLNKYRETEGEKNSMARQEDQ 126
K L E + S + Q
Sbjct: 97 KRQLTIQEENNKTEISKVSENVQ 119
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.128 0.365 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 221 209 0.00079 112 3 11 23 0.45 33
31 0.48 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 66
No. of states in DFA: 597 (63 KB)
Total size of DFA: 160 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.93u 0.11s 20.04t Elapsed: 00:00:01
Total cpu time: 19.94u 0.11s 20.05t Elapsed: 00:00:01
Start: Sat May 11 00:57:40 2013 End: Sat May 11 00:57:41 2013