Query 027606
Match_columns 221
No_of_seqs 157 out of 1271
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 12:27:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027606.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027606hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02364 L-ascorbate peroxidas 100.0 9.9E-64 2.1E-68 436.8 17.7 209 1-210 1-214 (250)
2 PLN02608 L-ascorbate peroxidas 100.0 8.4E-63 1.8E-67 437.5 17.8 205 5-210 3-211 (289)
3 PLN02879 L-ascorbate peroxidas 100.0 8E-63 1.7E-67 430.8 17.3 209 1-210 2-214 (251)
4 cd00691 ascorbate_peroxidase A 100.0 1.1E-59 2.4E-64 412.2 16.4 191 19-210 16-217 (253)
5 PLN03030 cationic peroxidase; 100.0 4.5E-59 9.8E-64 419.0 13.7 194 2-210 31-271 (324)
6 cd00693 secretory_peroxidase H 100.0 1.2E-56 2.7E-61 401.1 15.1 194 2-210 8-250 (298)
7 PF00141 peroxidase: Peroxidas 100.0 1.5E-55 3.2E-60 381.5 0.4 186 12-211 1-218 (230)
8 cd00692 ligninase Ligninase an 100.0 2.8E-50 6E-55 363.1 15.9 177 19-197 20-209 (328)
9 cd08201 plant_peroxidase_like_ 100.0 5.4E-51 1.2E-55 356.8 9.6 168 28-201 37-217 (264)
10 cd00314 plant_peroxidase_like 100.0 6.4E-50 1.4E-54 349.9 14.3 183 11-200 2-199 (255)
11 cd00649 catalase_peroxidase_1 100.0 2E-47 4.2E-52 350.5 12.5 192 8-200 36-314 (409)
12 TIGR00198 cat_per_HPI catalase 100.0 3.7E-45 8.1E-50 354.0 12.6 192 8-200 46-323 (716)
13 PRK15061 catalase/hydroperoxid 100.0 8.7E-43 1.9E-47 336.3 12.7 192 8-200 48-327 (726)
14 cd08200 catalase_peroxidase_2 100.0 5.4E-40 1.2E-44 290.9 14.9 196 13-214 13-244 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 1.7E-35 3.6E-40 287.0 15.9 197 12-214 430-657 (716)
16 PRK15061 catalase/hydroperoxid 100.0 2.4E-34 5.1E-39 277.9 15.3 194 13-212 438-667 (726)
17 COG0376 KatG Catalase (peroxid 100.0 9.9E-31 2.1E-35 244.1 11.0 194 8-202 61-341 (730)
18 COG0376 KatG Catalase (peroxid 99.6 9E-15 1.9E-19 137.7 10.0 196 13-214 448-673 (730)
19 PF15656 Tox-HDC: Toxin with a 44.4 15 0.00032 29.0 1.7 56 138-197 14-71 (119)
20 PRK13859 type IV secretion sys 29.6 37 0.00081 23.0 1.5 30 96-125 9-41 (55)
21 PF08383 Maf_N: Maf N-terminal 29.4 27 0.00058 21.7 0.8 15 147-161 19-34 (35)
22 COG4982 3-oxoacyl-[acyl-carrie 24.3 20 0.00043 36.2 -0.7 53 130-194 694-747 (866)
23 PF09533 DUF2380: Predicted li 22.9 79 0.0017 26.8 2.7 32 138-170 107-138 (188)
24 PTZ00411 transaldolase-like pr 21.7 72 0.0016 29.5 2.4 57 108-165 180-252 (333)
25 TIGR01911 HesB_rel_seleno HesB 21.4 25 0.00055 26.1 -0.5 32 17-58 8-39 (92)
No 1
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=9.9e-64 Score=436.78 Aligned_cols=209 Identities=74% Similarity=1.226 Sum_probs=199.8
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHhhHhhcCCchHHHHHHHhhhcCccccCCCCCCCCccccChHHhhccCCCchHHHHHH
Q 027606 1 MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRL 80 (221)
Q Consensus 1 ~~~~cp~~~~~v~~~v~~~~~~i~~~~~~~~~a~~llRL~FHDc~~~d~s~~~gG~dgSi~~~~E~~~~~N~gl~~~~~~ 80 (221)
|++.||.+.+.++.++++++++|++++.++.++|.||||+||||++||.....|||||||.+++|+++++|.||.+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~~~E~~~~~N~gl~~~~~~ 80 (250)
T PLN02364 1 MTKNYPTVSEDYKKAVEKCRRKLRGLIAEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRFDAEQAHGANSGIHIALRL 80 (250)
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHccccCcCcCCCCCCCCccccccccccCCCccCHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred HHHHHHhCCCCcHHHHHhhhcccceeecCCCCCCCCCCCCCCCCCCCCCCCCCCcCCHHHHHHHHHHh-cCCCchhhhhh
Q 027606 81 LEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQ-MGLSDKDIVAL 159 (221)
Q Consensus 81 i~~ik~~~p~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~lP~p~~~~~~l~~~F~~~-~Gls~~dlVaL 159 (221)
|++||+++++|||||||+||||+||+++|||.|+|++||+|+++++++++||.|+.+++++++.| ++ +||+++|||||
T Consensus 81 i~~ik~~~~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~lP~p~~~~~~l~~~F-~~~~Gl~~~d~VaL 159 (250)
T PLN02364 81 LDPIREQFPTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPPEGRLPDATKGCDHLRDVF-AKQMGLSDKDIVAL 159 (250)
T ss_pred HHHHHHHcCCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccccCCCCCCCcCHHHHHHHH-HHhcCCCHHHheee
Confidence 99999999999999999999999999999999999999999999998889999999999999999 76 69999999999
Q ss_pred ccccccccccCCCCCCCCCCCCCCCcccHHHHHHHHhC--CCCCc--cCcccccc
Q 027606 160 SGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTYVSLV--SLPDM--FGCVLFES 210 (221)
Q Consensus 160 sGaHTiG~~h~~~~~~~g~~~~tp~~fDn~Yy~~ll~~--~~~~~--~~~~l~~~ 210 (221)
+||||||++||.+++|.|+|+.||.+|||+||++|+.+ +.... +|+.|+++
T Consensus 160 sGaHTiG~~hc~r~~~~g~~~~tp~~fDn~Yy~~ll~~~~~gll~l~sD~~L~~d 214 (250)
T PLN02364 160 SGAHTLGRCHKDRSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQLVSDKALLDD 214 (250)
T ss_pred ecceeeccccCCCCCCCCCCCCCCCccchHHHHHHhcCCcCCCccccchHHHccC
Confidence 99999999999999999999999999999999999998 44544 88888764
No 2
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=8.4e-63 Score=437.48 Aligned_cols=205 Identities=63% Similarity=1.027 Sum_probs=195.9
Q ss_pred CCChhHHHHHHHHHHHHHHhhHhhcCCchHHHHHHHhhhcCccccCCCCCCCCccccChHHhhccCCCchHHHHHHHHHH
Q 027606 5 YPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPF 84 (221)
Q Consensus 5 cp~~~~~v~~~v~~~~~~i~~~~~~~~~a~~llRL~FHDc~~~d~s~~~gG~dgSi~~~~E~~~~~N~gl~~~~~~i~~i 84 (221)
.|.++..|..+|+.++++|+++++++.++|.||||+||||++||.+++.|||||||++++|+++++|.||++++++|++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~~E~~~~~N~gL~~g~~vid~i 82 (289)
T PLN02608 3 APVVDAEYLKEIEKARRDLRALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNEEEYSHGANNGLKIAIDLCEPV 82 (289)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecccccCCccccchHHHHHHHHHH
Confidence 58889999999999999999999999999999999999999999999999999999999999999999998899999999
Q ss_pred HHhCCCCcHHHHHhhhcccceeecCCCCCCCCCCCCCCCCCCCCCCCCCCcCCHHHHHHHHHHhcCCCchhhhhhccccc
Q 027606 85 KEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHT 164 (221)
Q Consensus 85 k~~~p~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~lP~p~~~~~~l~~~F~~~~Gls~~dlVaLsGaHT 164 (221)
|+++|+|||||||+||||+||+++|||.|+|++||+|+++++++++||+|+.+++++++.| +++||+++|||+|+||||
T Consensus 83 K~~~~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~LP~p~~~~~~l~~~F-~~~Gl~~~D~VaLsGAHT 161 (289)
T PLN02608 83 KAKHPKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPEEGRLPDAKKGAKHLRDVF-YRMGLSDKDIVALSGGHT 161 (289)
T ss_pred HHHcCCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCccCCCcCCCCCHHHHHHHH-HHcCCCHHHHhhhccccc
Confidence 9999999999999999999999999999999999999999988889999999999999999 999999999999999999
Q ss_pred cccccCCCCCCCCCCCCCCCcccHHHHHHHHhCC--CC--CccCcccccc
Q 027606 165 LGRCHKERSGFEGPWTRNPLIFDNSYFTYVSLVS--LP--DMFGCVLFES 210 (221)
Q Consensus 165 iG~~h~~~~~~~g~~~~tp~~fDn~Yy~~ll~~~--~~--~~~~~~l~~~ 210 (221)
||++||.+++|.|+|+.||.+|||+||++|+.++ .. ..+|+.|+++
T Consensus 162 iG~ahc~r~g~~g~~~~Tp~~FDN~Yy~~ll~~~~~gll~L~SD~~L~~d 211 (289)
T PLN02608 162 LGRAHPERSGFDGPWTKEPLKFDNSYFVELLKGESEGLLKLPTDKALLED 211 (289)
T ss_pred cccccccCCCCCCCCCCCCCccChHHHHHHHcCCcCCccccccCHhhhcC
Confidence 9999999999999999999999999999999984 44 4588888764
No 3
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=8e-63 Score=430.75 Aligned_cols=209 Identities=71% Similarity=1.197 Sum_probs=200.4
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHhhHhhcCCchHHHHHHHhhhcCccccCCCCCCCCccccChHHhhccCCCchHHHHHH
Q 027606 1 MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRL 80 (221)
Q Consensus 1 ~~~~cp~~~~~v~~~v~~~~~~i~~~~~~~~~a~~llRL~FHDc~~~d~s~~~gG~dgSi~~~~E~~~~~N~gl~~~~~~ 80 (221)
|.+.||.+.+.+++++++++++|.+++.++.++|.+|||+||||+|||..+++|||||||++.+|+++++|.||+.++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~~E~~~~~N~gL~~~~~~ 81 (251)
T PLN02879 2 VKKSYPEVKEEYKKAVQRCKRKLRGLIAEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHPQELAHDANNGLDIAVRL 81 (251)
T ss_pred CcccCCCccHHHHHHHHHHHHHHHHHHhCCCchhHhHHHHHhhhccccCCCCCCCCCeeecChhhccCCCcCChHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred HHHHHHhCCCCcHHHHHhhhcccceeecCCCCCCCCCCCCCCCCCCCCCCCCCCcCCHHHHHHHHHHhcCCCchhhhhhc
Q 027606 81 LEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALS 160 (221)
Q Consensus 81 i~~ik~~~p~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~lP~p~~~~~~l~~~F~~~~Gls~~dlVaLs 160 (221)
|++||+++++|||||||+||+++||+++|||.|+|++||+|+..++++++||.|+.+++++++.| +++||+++|||||+
T Consensus 82 i~~iK~~~~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~~~~lP~p~~~~~~l~~~F-~~~Gl~~~dlVALs 160 (251)
T PLN02879 82 LDPIKELFPILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPPEGRLPQATKGVDHLRDVF-GRMGLNDKDIVALS 160 (251)
T ss_pred HHHHHHHcCCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCcccCCCCCCCCHHHHHHHH-HHcCCCHHHHeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred cccccccccCCCCCCCCCCCCCCCcccHHHHHHHHhC--CCCC--ccCcccccc
Q 027606 161 GGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTYVSLV--SLPD--MFGCVLFES 210 (221)
Q Consensus 161 GaHTiG~~h~~~~~~~g~~~~tp~~fDn~Yy~~ll~~--~~~~--~~~~~l~~~ 210 (221)
||||||++||.++||.|+|+.||.+|||+||++|+.+ +... .+|+.|+++
T Consensus 161 GaHTiG~ah~~r~g~~g~~d~tp~~FDN~Yy~~ll~~~~~gll~L~SD~aL~~D 214 (251)
T PLN02879 161 GGHTLGRCHKERSGFEGAWTPNPLIFDNSYFKEILSGEKEGLLQLPTDKALLDD 214 (251)
T ss_pred ccccccccccccccCCCCCCCCccceeHHHHHHHHcCCcCCCccchhhHHHhcC
Confidence 9999999999999999999999999999999999998 4443 388888864
No 4
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=1.1e-59 Score=412.25 Aligned_cols=191 Identities=58% Similarity=1.041 Sum_probs=177.5
Q ss_pred HHHHHhhHhhcCCchHHHHHHHhhhcCccccCCCCCCCCccccChHHhhccCCCchHHHHHHHHHHHHhCCCCcHHHHHh
Q 027606 19 CKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQ 98 (221)
Q Consensus 19 ~~~~i~~~~~~~~~a~~llRL~FHDc~~~d~s~~~gG~dgSi~~~~E~~~~~N~gl~~~~~~i~~ik~~~p~VS~ADiia 98 (221)
+++.|+++++++.++|++|||+||||++||++.+.|||||++++.+|+++++|.+|.+++++|++||+++|+||||||||
T Consensus 16 V~~~v~~~~~~~~~~~~llRl~FHDc~~~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~~~VScADila 95 (253)
T cd00691 16 ARNDIAKLIDDKNCAPILVRLAWHDSGTYDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKYPDISYADLWQ 95 (253)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHhccccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 33334434449999999999999999999999999999999999899999999999889999999999999999999999
Q ss_pred hhcccceeecCCCCCCCCCCCCCCCCCC---CCCCCCCCcCCHHHHHHHHHHhcCCCchhhhhhccccccccccCCCCCC
Q 027606 99 LAGVVGVEVTGGPDIPFHPGRDDKAEPP---QEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGF 175 (221)
Q Consensus 99 lAa~~av~~~GGP~~~v~~GR~D~~~s~---~~~~lP~p~~~~~~l~~~F~~~~Gls~~dlVaLsGaHTiG~~h~~~~~~ 175 (221)
+|||+||+.+|||.|+|++||+|+.++. ++++||.|+.+++++++.| +++||+++|||+|+||||||++||.+++|
T Consensus 96 lAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F-~~~Gls~~d~VaLsGaHTiG~a~c~~~~~ 174 (253)
T cd00691 96 LAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVF-YRMGFNDQEIVALSGAHTLGRCHKERSGY 174 (253)
T ss_pred HHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHH-HhcCCCHHHHHHhcccceeecccccCCCC
Confidence 9999999999999999999999999986 6778999999999999999 99999999999999999999999988888
Q ss_pred CCCCCCCCCcccHHHHHHHHhCCC--------CCccCcccccc
Q 027606 176 EGPWTRNPLIFDNSYFTYVSLVSL--------PDMFGCVLFES 210 (221)
Q Consensus 176 ~g~~~~tp~~fDn~Yy~~ll~~~~--------~~~~~~~l~~~ 210 (221)
.|+|+.||.+|||+||++|+.++| ...+|+.|+++
T Consensus 175 ~g~~~~tp~~FDn~Yy~~ll~~~g~~~~~~~~~L~sD~~L~~d 217 (253)
T cd00691 175 DGPWTKNPLKFDNSYFKELLEEDWKLPTPGLLMLPTDKALLED 217 (253)
T ss_pred CCCCCCCCCcccHHHHHHHhcCCCccCcCcceechhhHHHHcC
Confidence 888899999999999999999999 67788888864
No 5
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=4.5e-59 Score=418.98 Aligned_cols=194 Identities=26% Similarity=0.322 Sum_probs=176.3
Q ss_pred CCCCCChhHHHHHHHHHHHHHHhhHhhcCCchHHHHHHHhhhcCccccCCCCCCCCccccCh---HHhhccCCCchHHHH
Q 027606 2 TKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLA---AEQAHSANNGLDIAV 78 (221)
Q Consensus 2 ~~~cp~~~~~v~~~v~~~~~~i~~~~~~~~~a~~llRL~FHDc~~~d~s~~~gG~dgSi~~~---~E~~~~~N~gl~~~~ 78 (221)
.++||++|+||+++|+++ +.+|++++|++|||+|||||+ +||||||++. .|+++++|.+| ++|
T Consensus 31 ~~sCP~aE~iV~~~v~~~------~~~d~~~aa~llRL~FHDCfv-------~GCDaSvLl~~~~~Ek~a~~N~~l-~Gf 96 (324)
T PLN03030 31 STTCPQAESIVRKTVQSH------FQSNPAIAPGLLRMHFHDCFV-------RGCDASILIDGSNTEKTALPNLLL-RGY 96 (324)
T ss_pred hCcCCCHHHHHHHHHHHH------HhhCcccchhhhhhhhhhhee-------cCCceEEeeCCCcccccCCCCcCc-chH
Confidence 479999999999999999 889999999999999999998 9999999984 69999999998 689
Q ss_pred HHHHHHHHh----CC-CCcHHHHHhhhcccceeecCCCCCCCCCCCCCCCCCC--CCCCCCCCcCCHHHHHHHHHHhcCC
Q 027606 79 RLLEPFKEQ----FP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPP--QEGRLPDAKQGNDHLRQVFGAQMGL 151 (221)
Q Consensus 79 ~~i~~ik~~----~p-~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~--~~~~lP~p~~~~~~l~~~F~~~~Gl 151 (221)
++|+.||++ || +||||||||+|||+||+++|||.|+|++||+|++++. ...+||.|+.+++++++.| +++||
T Consensus 97 ~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~~LP~p~~~~~~l~~~F-~~~Gl 175 (324)
T PLN03030 97 DVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDASNLPGFTDSIDVQKQKF-AAKGL 175 (324)
T ss_pred HHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCcccccCCcCCCCCHHHHHHHH-HHcCC
Confidence 999999975 88 7999999999999999999999999999999998873 3458999999999999999 99999
Q ss_pred CchhhhhhccccccccccCCCC-----CCCC-------------------------C-------CCCCCCcccHHHHHHH
Q 027606 152 SDKDIVALSGGHTLGRCHKERS-----GFEG-------------------------P-------WTRNPLIFDNSYFTYV 194 (221)
Q Consensus 152 s~~dlVaLsGaHTiG~~h~~~~-----~~~g-------------------------~-------~~~tp~~fDn~Yy~~l 194 (221)
+.+|||+|+||||||++||..+ +|.+ . +..||.+|||+||++|
T Consensus 176 ~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~nl 255 (324)
T PLN03030 176 NTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSNL 255 (324)
T ss_pred CHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHHH
Confidence 9999999999999999999532 2211 0 2258999999999999
Q ss_pred HhCCCCCccCcccccc
Q 027606 195 SLVSLPDMFGCVLFES 210 (221)
Q Consensus 195 l~~~~~~~~~~~l~~~ 210 (221)
+.++....+|+.|+++
T Consensus 256 l~~rGlL~SDq~L~~d 271 (324)
T PLN03030 256 KNGRGILESDQKLWTD 271 (324)
T ss_pred HhcCCCcCCchHhhcC
Confidence 9999999999999875
No 6
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=1.2e-56 Score=401.09 Aligned_cols=194 Identities=29% Similarity=0.417 Sum_probs=176.1
Q ss_pred CCCCCChhHHHHHHHHHHHHHHhhHhhcCCchHHHHHHHhhhcCccccCCCCCCCCccccCh------HHhhccCCCchH
Q 027606 2 TKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLA------AEQAHSANNGLD 75 (221)
Q Consensus 2 ~~~cp~~~~~v~~~v~~~~~~i~~~~~~~~~a~~llRL~FHDc~~~d~s~~~gG~dgSi~~~------~E~~~~~N~gl~ 75 (221)
..+||++|++|+++|+++ +..+++++|++|||+||||++ +||||||+++ +|+++++|.++
T Consensus 8 ~~sCP~~e~iV~~~v~~~------~~~~~~~a~~~lRl~FHDc~v-------~GcDaSill~~~~~~~~E~~~~~N~~l- 73 (298)
T cd00693 8 SKSCPNAESIVRSVVRAA------VKADPRLAAALLRLHFHDCFV-------RGCDASVLLDSTANNTSEKDAPPNLSL- 73 (298)
T ss_pred cCCCCChHHHHHHHHHHH------HHhCCCcCchhhhhhhHhhhc-------cCcceeEEecCCCCCchhccCCCCCCc-
Confidence 579999999999999998 889999999999999999998 9999999973 69999999998
Q ss_pred HHHHHHHHHHHh----CC-CCcHHHHHhhhcccceeecCCCCCCCCCCCCCCCCCCC--CCCCCCCcCCHHHHHHHHHHh
Q 027606 76 IAVRLLEPFKEQ----FP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ--EGRLPDAKQGNDHLRQVFGAQ 148 (221)
Q Consensus 76 ~~~~~i~~ik~~----~p-~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~--~~~lP~p~~~~~~l~~~F~~~ 148 (221)
++|++|++||++ || +||||||||||||+||+.+|||.|+|++||+|+..+.+ .++||+|+.+++++++.| ++
T Consensus 74 ~g~~~i~~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F-~~ 152 (298)
T cd00693 74 RGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDVGNLPSPFFSVSQLISLF-AS 152 (298)
T ss_pred chhHHHHHHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccccCCCCcccCHHHHHHHH-HH
Confidence 699999999975 78 89999999999999999999999999999999987643 368999999999999999 99
Q ss_pred cCCCchhhhhhccccccccccCC----C-CCCCC--------------------CC----------C-CCCCcccHHHHH
Q 027606 149 MGLSDKDIVALSGGHTLGRCHKE----R-SGFEG--------------------PW----------T-RNPLIFDNSYFT 192 (221)
Q Consensus 149 ~Gls~~dlVaLsGaHTiG~~h~~----~-~~~~g--------------------~~----------~-~tp~~fDn~Yy~ 192 (221)
+||+++|||||+||||||++||. | ++|.| ++ + .||.+|||+||+
T Consensus 153 ~G~~~~d~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~ 232 (298)
T cd00693 153 KGLTVTDLVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYK 232 (298)
T ss_pred cCCCHHHheeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHH
Confidence 99999999999999999999994 2 24422 11 2 789999999999
Q ss_pred HHHhCCCCCccCcccccc
Q 027606 193 YVSLVSLPDMFGCVLFES 210 (221)
Q Consensus 193 ~ll~~~~~~~~~~~l~~~ 210 (221)
+|+.++....+|+.|+.+
T Consensus 233 ~l~~~~glL~SD~~L~~d 250 (298)
T cd00693 233 NLLAGRGLLTSDQALLSD 250 (298)
T ss_pred HHHhcccCccCCHHhccC
Confidence 999999988999999875
No 7
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=1.5e-55 Score=381.48 Aligned_cols=186 Identities=35% Similarity=0.560 Sum_probs=159.6
Q ss_pred HHHHHHHHHHHHhhHhhcCCchHHHHHHHhhhcCccccCCCCCCCCccccC-hHHhhccCCCchHHHHHHHHHHHHh---
Q 027606 12 YKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRL-AAEQAHSANNGLDIAVRLLEPFKEQ--- 87 (221)
Q Consensus 12 v~~~v~~~~~~i~~~~~~~~~a~~llRL~FHDc~~~d~s~~~gG~dgSi~~-~~E~~~~~N~gl~~~~~~i~~ik~~--- 87 (221)
|+++|+++ +..+++++|+||||+||||++| |||||||++ ..|+++++|.||++++++|++||++
T Consensus 1 Vr~~v~~~------~~~~~~~~~~~lRl~FHDc~~~------~GcDgSil~~~~e~~~~~N~gl~~~~~~i~~ik~~~~~ 68 (230)
T PF00141_consen 1 VRSDVRAA------FKKDPTLAPGLLRLAFHDCFVY------GGCDGSILLFSAEKDAPPNRGLRDGFDVIDPIKAKLEA 68 (230)
T ss_dssp HHHHHHHH------HHHHTTSHHHHHHHHHHHHTTH------TSSSSGGGGSTTGGGSGGGTTHHHHHHHHHHHHHHHCH
T ss_pred CHHHHHHH------HHHCcCccHHHHHHHccccccc------cccccceeccccccccccccCcceeeechhhHHhhhcc
Confidence 56777777 7779999999999999999987 999999976 7899999999998899999999986
Q ss_pred -CC-CCcHHHHHhhhcccceeecCCCCCCCCCCCCCCCCCCCCC--CCCCCcCCHHHHHHHHHHhcCCCchhhhhhcccc
Q 027606 88 -FP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEG--RLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGH 163 (221)
Q Consensus 88 -~p-~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~--~lP~p~~~~~~l~~~F~~~~Gls~~dlVaLsGaH 163 (221)
|| +|||||||++|+++||+.+|||.|+|++||+|+..+++.+ +||.|..+++++++.| +++|||++|||||+|||
T Consensus 69 ~cp~~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F-~~~Gls~~e~VaLsGaH 147 (230)
T PF00141_consen 69 ACPGVVSCADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGASNLPSPTDSVDQLLAFF-ARKGLSAEEMVALSGAH 147 (230)
T ss_dssp HSTTTS-HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHHHHSSTTTSHHHHHHHHH-HHTT--HHHHHHHHGGG
T ss_pred cccCCCCHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccchhhhhh-hccccchhhhcceeccc
Confidence 77 6999999999999999999999999999999999997543 5999999999999999 99999999999999999
Q ss_pred ccccccCCCCC-------------CCC-----------CCCCCCCcccHHHHHHHHhCCCCCccCccccccc
Q 027606 164 TLGRCHKERSG-------------FEG-----------PWTRNPLIFDNSYFTYVSLVSLPDMFGCVLFESF 211 (221)
Q Consensus 164 TiG~~h~~~~~-------------~~g-----------~~~~tp~~fDn~Yy~~ll~~~~~~~~~~~l~~~~ 211 (221)
|||.+||..+. |.+ +++ ||.+|||+||++|++++....+|+.|+++-
T Consensus 148 TiG~~~c~~f~rl~~~~dp~~d~~~~~~~C~~~~~~~~~~d-tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~ 218 (230)
T PF00141_consen 148 TIGRAHCSSFSRLYFPPDPTMDPGYAGQNCNSGGDNGVPLD-TPTVFDNSYYKNLLNGRGLLPSDQALLNDP 218 (230)
T ss_dssp GSTEESGGCTGGTSCSSGTTSTHHHHHHSSSTSGCTCEESS-STTS-SSHHHHHHHHTEEEEHHHHHHHHST
T ss_pred ccccceeccccccccccccccccccceeccCCCcccccccc-CCCcchhHHHHHHhcCCCcCHHHHHHhcCH
Confidence 99999996211 100 234 899999999999999998888888888653
No 8
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=2.8e-50 Score=363.10 Aligned_cols=177 Identities=31% Similarity=0.509 Sum_probs=153.9
Q ss_pred HHHHHhhHh-hcCC---chHHHHHHHhhhcCcccc-----CCCCCCCCccccCh--HHhhccCCCchHHHHHHHHHHHHh
Q 027606 19 CKRKLRGFI-AEKN---CAPLMLRIAWHSAGTYDV-----KTKTGGPFGTMRLA--AEQAHSANNGLDIAVRLLEPFKEQ 87 (221)
Q Consensus 19 ~~~~i~~~~-~~~~---~a~~llRL~FHDc~~~d~-----s~~~gG~dgSi~~~--~E~~~~~N~gl~~~~~~i~~ik~~ 87 (221)
++++|++.+ .+.. .|+.+|||+||||++||. ..+.|||||||++. .|+++++|.||+..++.|++++++
T Consensus 20 v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~~E~~~~~N~gL~~vvd~lk~~~e~ 99 (328)
T cd00692 20 ILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDDIETAFHANIGLDEIVEALRPFHQK 99 (328)
T ss_pred HHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCcccccCCCCCCHHHHHHHHHHHHHh
Confidence 344444444 3444 466799999999999994 56789999999874 599999999998777888887777
Q ss_pred CCCCcHHHHHhhhccccee-ecCCCCCCCCCCCCCCCCCCCCCCCCCCcCCHHHHHHHHHHhcCCCchhhhhhccccccc
Q 027606 88 FPTISYADLYQLAGVVGVE-VTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLG 166 (221)
Q Consensus 88 ~p~VS~ADiialAa~~av~-~~GGP~~~v~~GR~D~~~s~~~~~lP~p~~~~~~l~~~F~~~~Gls~~dlVaLsGaHTiG 166 (221)
++ ||||||||||||+||+ ++|||.|+|++||+|++.+.++++||.|+.+++++++.| +++||+++|||+|+||||||
T Consensus 100 ~c-VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~~g~LP~p~~sv~~l~~~F-~~~Gf~~~E~VaLsGAHTiG 177 (328)
T cd00692 100 HN-VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAPDGLVPEPFDSVDKILARF-ADAGFSPDELVALLAAHSVA 177 (328)
T ss_pred cC-cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCcccCCCCCCCCHHHHHHHH-HHcCCCHHHHhhhccccccc
Confidence 66 9999999999999999 569999999999999999999999999999999999999 99999999999999999999
Q ss_pred cccCCCCCCCC-CCCCCCCcccHHHHHHHHhC
Q 027606 167 RCHKERSGFEG-PWTRNPLIFDNSYFTYVSLV 197 (221)
Q Consensus 167 ~~h~~~~~~~g-~~~~tp~~fDn~Yy~~ll~~ 197 (221)
++|.......| +|+.||.+|||+||+|++.+
T Consensus 178 ~a~~~Dps~~g~p~D~TP~~FDn~Yf~~ll~~ 209 (328)
T cd00692 178 AQDFVDPSIAGTPFDSTPGVFDTQFFIETLLK 209 (328)
T ss_pred ccCCCCCCCCCCCCCCCcchhcHHHHHHHHHc
Confidence 99965554444 78999999999999998843
No 9
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=5.4e-51 Score=356.78 Aligned_cols=168 Identities=30% Similarity=0.452 Sum_probs=150.1
Q ss_pred hcCCchHHHHHHHhhhcCccccCCCCCCCCccccChHHhhccCCCchH--HHHHHHHHHHHhCCCCcHHHHHhhhcccce
Q 027606 28 AEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLD--IAVRLLEPFKEQFPTISYADLYQLAGVVGV 105 (221)
Q Consensus 28 ~~~~~a~~llRL~FHDc~~~d~s~~~gG~dgSi~~~~E~~~~~N~gl~--~~~~~i~~ik~~~p~VS~ADiialAa~~av 105 (221)
.++.++++||||+||||++||...+.|||||||++ |...+||.|+. ..++.++.|+. +.||||||||||+++||
T Consensus 37 ~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIll--e~~~~En~G~~~n~~l~~~~~i~~--~~VScADiialAa~~AV 112 (264)
T cd08201 37 PGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQY--ELDRPENIGSGFNTTLNFFVNFYS--PRSSMADLIAMGVVTSV 112 (264)
T ss_pred CCccHHHHHHHHHHHhhcCcccCCCCCCCCcceee--cCCChhhccCchhhccccceeecc--CccCHHHHHHHHHHHHH
Confidence 46689999999999999999999999999999998 56788888775 34555555543 58999999999999999
Q ss_pred eecCCCCCCCCCCCCCCCCCCCCCCCCCCcCCHHHHHHHHHHhcCCCchhhhhhcc-ccccccccCCCC------CCC--
Q 027606 106 EVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSG-GHTLGRCHKERS------GFE-- 176 (221)
Q Consensus 106 ~~~GGP~~~v~~GR~D~~~s~~~~~lP~p~~~~~~l~~~F~~~~Gls~~dlVaLsG-aHTiG~~h~~~~------~~~-- 176 (221)
+.+|||.|+|++||+|++.+.+.+ ||.|+.+++++++.| +++||+++|||+|+| |||||++||..+ ++.
T Consensus 113 ~~~GGP~i~v~~GR~Da~~s~~~g-lP~P~~~v~~l~~~F-a~~Gfs~~DmVaLsggaHTiG~ahc~~f~~~~~~g~~~~ 190 (264)
T cd08201 113 ASCGGPVVPFRAGRIDATEAGQAG-VPEPQTDLGTTTESF-RRQGFSTSEMIALVACGHTLGGVHSEDFPEIVPPGSVPD 190 (264)
T ss_pred HHcCCCeecccccCCCcccccccc-CCCCccCHHHHHHHH-HHcCCChHHHheeecCCeeeeecccccchhhcCCccccC
Confidence 999999999999999999998876 999999999999999 999999999999995 999999999775 444
Q ss_pred C--CCCCCCCcccHHHHHHHHhCCCCC
Q 027606 177 G--PWTRNPLIFDNSYFTYVSLVSLPD 201 (221)
Q Consensus 177 g--~~~~tp~~fDn~Yy~~ll~~~~~~ 201 (221)
+ +|++||.+|||+||.+++.+.+++
T Consensus 191 ~~~p~dstp~~FDn~~f~E~l~g~~~~ 217 (264)
T cd08201 191 TVLQFFDTTIQFDNKVVTEYLSGTTNN 217 (264)
T ss_pred CCCCCCCCccccchHHHHHHhcCCCCC
Confidence 3 799999999999999999998753
No 10
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=6.4e-50 Score=349.93 Aligned_cols=183 Identities=44% Similarity=0.716 Sum_probs=167.2
Q ss_pred HHHHHHHHHHHHHhhHhhcCCchHHHHHHHhhhcCccccCC-CCCCCCccccChHHhhccCCCchHHHHHHHHHHHHhCC
Q 027606 11 DYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKT-KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFP 89 (221)
Q Consensus 11 ~v~~~v~~~~~~i~~~~~~~~~a~~llRL~FHDc~~~d~s~-~~gG~dgSi~~~~E~~~~~N~gl~~~~~~i~~ik~~~p 89 (221)
.|++.|++. +.+++.+++++|||+||||++|+.+. +.|||||||++.+|+++++|.+|.+++++|++||.+++
T Consensus 2 ~v~~~l~~~------~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~~e~~~~~N~~l~~~~~~l~~ik~~~~ 75 (255)
T cd00314 2 AIKAILEDL------ITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFEPELDRPENGGLDKALRALEPIKSAYD 75 (255)
T ss_pred hHHHHHHHH------HHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEeccccccCcccccHHHHHHHHHHHHHHcC
Confidence 355666655 55688999999999999999999886 78999999999999999999999889999999999985
Q ss_pred ---CCcHHHHHhhhcccceeec--CCCCCCCCCCCCCCC-----CCCCCCCCCCCcCCHHHHHHHHHHhcCCCchhhhhh
Q 027606 90 ---TISYADLYQLAGVVGVEVT--GGPDIPFHPGRDDKA-----EPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL 159 (221)
Q Consensus 90 ---~VS~ADiialAa~~av~~~--GGP~~~v~~GR~D~~-----~s~~~~~lP~p~~~~~~l~~~F~~~~Gls~~dlVaL 159 (221)
+|||||||++|+++||+.+ |||.|+|++||+|++ .+.|.+++|.|..+++++++.| .++||+++|||||
T Consensus 76 ~~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F-~~~Gl~~~e~VAL 154 (255)
T cd00314 76 GGNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKF-KRMGLSPSELVAL 154 (255)
T ss_pred CCCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHH-HHcCCCHHHHHhh
Confidence 7999999999999999999 999999999999998 5567788999999999999999 9999999999999
Q ss_pred c-ccccc-ccccCCCCCCC--CCCCCCCCcccHHHHHHHHhCCCC
Q 027606 160 S-GGHTL-GRCHKERSGFE--GPWTRNPLIFDNSYFTYVSLVSLP 200 (221)
Q Consensus 160 s-GaHTi-G~~h~~~~~~~--g~~~~tp~~fDn~Yy~~ll~~~~~ 200 (221)
+ |+||| |++||..++.. +.|+.||.+|||+||++|+.++|+
T Consensus 155 ~~GaHti~G~~~~~~~~~~~~~~~~~tp~~fDN~yy~~l~~~~~~ 199 (255)
T cd00314 155 SAGAHTLGGKNHGDLLNYEGSGLWTSTPFTFDNAYFKNLLDMNWE 199 (255)
T ss_pred ccCCeeccCcccCCCCCcccCCCCCCCCCccchHHHHHHhcCCcc
Confidence 9 99999 99999876654 678899999999999999999964
No 11
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=2e-47 Score=350.51 Aligned_cols=192 Identities=39% Similarity=0.646 Sum_probs=172.8
Q ss_pred hhHHHHHHHHHHHHHHhhHhhcC---------CchHHHHHHHhhhcCccccCCCCCCCC-ccccChHHhhccCCCchHHH
Q 027606 8 VSEDYKKAVEKCKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIA 77 (221)
Q Consensus 8 ~~~~v~~~v~~~~~~i~~~~~~~---------~~a~~llRL~FHDc~~~d~s~~~gG~d-gSi~~~~E~~~~~N~gl~~~ 77 (221)
.++.-+-.+++++++|++++++. .++|.+|||+||+++|||.++++||++ |+|+|.+|.+++.|.||.++
T Consensus 36 ~~~~~~~d~~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~pe~~~~~N~gL~~a 115 (409)
T cd00649 36 AEEFKKLDLEALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFAPLNSWPDNVNLDKA 115 (409)
T ss_pred HHHhhhccHHHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccccccCcHhhhhHHHH
Confidence 34444556788999999999875 689999999999999999999999998 79999999999999999999
Q ss_pred HHHHHHHHHhCC-CCcHHHHHhhhcccceeecCCCCCCCCCCCCCCCCCC------------------------------
Q 027606 78 VRLLEPFKEQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPP------------------------------ 126 (221)
Q Consensus 78 ~~~i~~ik~~~p-~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~------------------------------ 126 (221)
+.++++||+++| .||+||+|+||+.+|||.+|||.|+|.+||.|...+.
T Consensus 116 ~~~L~pik~k~~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~pl~a~ 195 (409)
T cd00649 116 RRLLWPIKQKYGNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENPLAAV 195 (409)
T ss_pred HHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccccchhhccchhhh
Confidence 999999999998 7999999999999999999999999999999996431
Q ss_pred --------CCC--CCCCCcCCHHHHHHHHHHhcCCCchhhhhh-ccccccccccCCC-----------------------
Q 027606 127 --------QEG--RLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKER----------------------- 172 (221)
Q Consensus 127 --------~~~--~lP~p~~~~~~l~~~F~~~~Gls~~dlVaL-sGaHTiG~~h~~~----------------------- 172 (221)
|++ .||.|..++.+|++.| .+|||+.+||||| +||||||++||..
T Consensus 196 ~mgliyv~Pegp~gLPdP~~sa~~LR~~F-~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg~dP~~~~~~~~gLgw~~ 274 (409)
T cd00649 196 QMGLIYVNPEGPDGNPDPLAAAKDIRETF-ARMAMNDEETVALIAGGHTFGKTHGAGPASHVGPEPEAAPIEQQGLGWKN 274 (409)
T ss_pred hccccccCCCCCCCCCCCccCHHHHHHHH-HHcCCCHHHHeeeccCCcceeecCcccccccCCCCCCcCHHHHHhhcccc
Confidence 334 6999999999999999 9999999999999 5999999999942
Q ss_pred ------------CCCCCCCCCCCCcccHHHHHHHHhCCCC
Q 027606 173 ------------SGFEGPWTRNPLIFDNSYFTYVSLVSLP 200 (221)
Q Consensus 173 ------------~~~~g~~~~tp~~fDn~Yy~~ll~~~~~ 200 (221)
++++|+|+.||.+|||+||++|+..+|.
T Consensus 275 ~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~ 314 (409)
T cd00649 275 SYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWE 314 (409)
T ss_pred cCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccce
Confidence 2567889999999999999999996643
No 12
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=3.7e-45 Score=354.01 Aligned_cols=192 Identities=38% Similarity=0.629 Sum_probs=171.4
Q ss_pred hhHHHHHHHHHHHHHHhhHhhcC---------CchHHHHHHHhhhcCccccCCCCCCCC-ccccChHHhhccCCCchHHH
Q 027606 8 VSEDYKKAVEKCKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIA 77 (221)
Q Consensus 8 ~~~~v~~~v~~~~~~i~~~~~~~---------~~a~~llRL~FHDc~~~d~s~~~gG~d-gSi~~~~E~~~~~N~gl~~~ 77 (221)
.++.-+-.++.+|++|+++++++ .++|.+|||+||+++||+.+++.||++ |+|+|.+|++++.|.+|.++
T Consensus 46 ~~~~~~ld~~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~P~~sw~~N~~Ldka 125 (716)
T TIGR00198 46 AEEFQQLDLAAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFAPLNSWPDNVNLDKA 125 (716)
T ss_pred HHHhhhccHHHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecccccCchhhhhHHHH
Confidence 34444555677999999999875 589999999999999999999999997 79999999999999999999
Q ss_pred HHHHHHHHHhCC-CCcHHHHHhhhcccceeecCCCCCCCCCCCCCCCCCC------------------------------
Q 027606 78 VRLLEPFKEQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPP------------------------------ 126 (221)
Q Consensus 78 ~~~i~~ik~~~p-~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~------------------------------ 126 (221)
+.++++||++|| .|||||||+||+++||+.+|||.|+|.+||+|++.+.
T Consensus 126 ~~lL~pIk~kyp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~a~~~ 205 (716)
T TIGR00198 126 RRLLWPIKKKYGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSREDRESLENPLAATE 205 (716)
T ss_pred HHHHHHHHHHCCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccccccccccccchhhh
Confidence 999999999998 7999999999999999999999999999999994321
Q ss_pred -------CCC--CCCCCcCCHHHHHHHHHHhcCCCchhhhhhc-cccccccccCCC------------------------
Q 027606 127 -------QEG--RLPDAKQGNDHLRQVFGAQMGLSDKDIVALS-GGHTLGRCHKER------------------------ 172 (221)
Q Consensus 127 -------~~~--~lP~p~~~~~~l~~~F~~~~Gls~~dlVaLs-GaHTiG~~h~~~------------------------ 172 (221)
+++ .+|.|..+.++|++.| .+||||.+|||||+ ||||||++||..
T Consensus 206 ~Gliyvnpeg~~~lPdP~~sa~~Lrd~F-~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rlg~dP~~~~~~~~gLg~~c~ 284 (716)
T TIGR00198 206 MGLIYVNPEGPDGHPDPLCTAQDIRTTF-ARMGMNDEETVALIAGGHTVGKCHGAGPAELIGPDPEGAPIEEQGLGWHNQ 284 (716)
T ss_pred ccccccCcccccCCCCCCCCHHHHHHHH-HHcCCChHHHeeeecCceeccccCCCcccccCCCCCCcCHHHHHHhcccCC
Confidence 222 6999999999999999 99999999999995 999999999942
Q ss_pred -----------CCCCCCCCCCCCcccHHHHHHHHhCCCC
Q 027606 173 -----------SGFEGPWTRNPLIFDNSYFTYVSLVSLP 200 (221)
Q Consensus 173 -----------~~~~g~~~~tp~~fDn~Yy~~ll~~~~~ 200 (221)
++++|+|+.||.+|||+||++|+.+.|.
T Consensus 285 ~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~ 323 (716)
T TIGR00198 285 YGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWE 323 (716)
T ss_pred CCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCce
Confidence 3455789999999999999999998654
No 13
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=8.7e-43 Score=336.25 Aligned_cols=192 Identities=40% Similarity=0.655 Sum_probs=171.9
Q ss_pred hhHHHHHHHHHHHHHHhhHhhcC---------CchHHHHHHHhhhcCccccCCCCCCCC-ccccChHHhhccCCCchHHH
Q 027606 8 VSEDYKKAVEKCKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIA 77 (221)
Q Consensus 8 ~~~~v~~~v~~~~~~i~~~~~~~---------~~a~~llRL~FHDc~~~d~s~~~gG~d-gSi~~~~E~~~~~N~gl~~~ 77 (221)
+++.-.-.++.+|++|+++++++ .++|.+|||+||+++|||.+++.||++ |+|+|.+|.+++.|.+|.++
T Consensus 48 ~~~~~~ld~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~pe~~w~~N~gL~ka 127 (726)
T PRK15061 48 AEEFKKLDLEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFAPLNSWPDNVNLDKA 127 (726)
T ss_pred HHHhchhhHHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCcccccchhhhhHHHH
Confidence 45555667788999999999875 689999999999999999999999998 79999999999999999999
Q ss_pred HHHHHHHHHhCC-CCcHHHHHhhhcccceeecCCCCCCCCCCCCCCCCCCC-----------------------------
Q 027606 78 VRLLEPFKEQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ----------------------------- 127 (221)
Q Consensus 78 ~~~i~~ik~~~p-~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~----------------------------- 127 (221)
+.+|++||.+|| .||+||+|+||+.+|||.+|||.|+|.+||.|...+..
T Consensus 128 ~~~L~pik~ky~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~pl~a 207 (726)
T PRK15061 128 RRLLWPIKQKYGNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGDERYSGERDLENPLAA 207 (726)
T ss_pred HHHHHHHHHHhCCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccccccccccccccccccchhh
Confidence 999999999998 79999999999999999999999999999999864321
Q ss_pred ----------CC--CCCCCcCCHHHHHHHHHHhcCCCchhhhhhc-cccccccccCCC----------------------
Q 027606 128 ----------EG--RLPDAKQGNDHLRQVFGAQMGLSDKDIVALS-GGHTLGRCHKER---------------------- 172 (221)
Q Consensus 128 ----------~~--~lP~p~~~~~~l~~~F~~~~Gls~~dlVaLs-GaHTiG~~h~~~---------------------- 172 (221)
++ -+|+|..++.+|++.| .+||||.+|||||+ ||||||++||..
T Consensus 208 ~~mgliyvnpegp~glPdP~~sa~~lR~tF-~RMGmnDeEtVALiaGgHT~GkaHca~~~~rlgpdP~~a~~~~qgLgw~ 286 (726)
T PRK15061 208 VQMGLIYVNPEGPNGNPDPLAAARDIRETF-ARMAMNDEETVALIAGGHTFGKTHGAGDASHVGPEPEAAPIEEQGLGWK 286 (726)
T ss_pred hhccceecCCCCCCCCCCcccCHHHHHHHH-HHcCCCHHHheeeccCCceeeeCCCcCcccccCCCCCcCHHHHHhcccc
Confidence 11 2688999999999999 99999999999995 999999999942
Q ss_pred -------------CCCCCCCCCCCCcccHHHHHHHHhCCCC
Q 027606 173 -------------SGFEGPWTRNPLIFDNSYFTYVSLVSLP 200 (221)
Q Consensus 173 -------------~~~~g~~~~tp~~fDn~Yy~~ll~~~~~ 200 (221)
+|++|+|+.||.+|||+||++|+.+.|.
T Consensus 287 ~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~ 327 (726)
T PRK15061 287 NSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWE 327 (726)
T ss_pred ccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcce
Confidence 2466789999999999999999998654
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=5.4e-40 Score=290.93 Aligned_cols=196 Identities=28% Similarity=0.383 Sum_probs=165.5
Q ss_pred HHHHHHHHHHHhhHhhcCCchHHHHHHHhhhcCccccCCCCCCCCcc-ccChHHhhccCCCc--hHHHHHHHHHHHHhCC
Q 027606 13 KKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGT-MRLAAEQAHSANNG--LDIAVRLLEPFKEQFP 89 (221)
Q Consensus 13 ~~~v~~~~~~i~~~~~~~~~a~~llRL~FHDc~~~d~s~~~gG~dgS-i~~~~E~~~~~N~g--l~~~~~~i~~ik~~~p 89 (221)
.+.|+..|++ ++...-+++.+|||+||+++||+.++++||++|+ |+|.+|++++.|.+ |.+++.++++||.++|
T Consensus 13 ~~di~~lk~~---i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl~pe~~w~~N~~~~L~~~~~~Le~ik~~~~ 89 (297)
T cd08200 13 DADIAALKAK---ILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRLAPQKDWEVNEPEELAKVLAVLEGIQKEFN 89 (297)
T ss_pred HHHHHHHHHH---HHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccCccccCcCccCcHHHHHHHHHHHHHHHHhc
Confidence 4566666666 5566678999999999999999999999999986 99999999999999 9999999999999997
Q ss_pred -------CCcHHHHHhhhcccceeecCC-----CCCCCCCCCCCCCCCCC--C---CCCCCCcC------------CHHH
Q 027606 90 -------TISYADLYQLAGVVGVEVTGG-----PDIPFHPGRDDKAEPPQ--E---GRLPDAKQ------------GNDH 140 (221)
Q Consensus 90 -------~VS~ADiialAa~~av~~~GG-----P~~~v~~GR~D~~~s~~--~---~~lP~p~~------------~~~~ 140 (221)
.||.||+|+||+.+|||.+|| |.|+|.+||.|.+.+.. + .++|.+.. ..+.
T Consensus 90 ~~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~ 169 (297)
T cd08200 90 ESQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEM 169 (297)
T ss_pred ccccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHH
Confidence 799999999999999999999 99999999999987532 1 23454321 2467
Q ss_pred HHHHHHHhcCCCchhhhhhcccc-ccccccCCCCCCCCCCCCCCCcccHHHHHHHHhCCCCCc---cCcccccccCcC
Q 027606 141 LRQVFGAQMGLSDKDIVALSGGH-TLGRCHKERSGFEGPWTRNPLIFDNSYFTYVSLVSLPDM---FGCVLFESFCMN 214 (221)
Q Consensus 141 l~~~F~~~~Gls~~dlVaLsGaH-TiG~~h~~~~~~~g~~~~tp~~fDn~Yy~~ll~~~~~~~---~~~~l~~~~~~~ 214 (221)
|++.| .++|||++|||||+||| ++|.+|. ++ +.|+|+.+|.+|||+||++|+.+++.+. .+..+|+.++.+
T Consensus 170 Lrd~f-~rlglsd~EmvaL~Gg~r~lG~~~~-~s-~~G~wT~~p~~f~N~fF~nLLd~~~~W~~~~~~~~~~~~~dr~ 244 (297)
T cd08200 170 LVDKA-QLLTLTAPEMTVLVGGLRVLGANYG-GS-KHGVFTDRPGVLTNDFFVNLLDMSTEWKPADEDDGLFEGRDRK 244 (297)
T ss_pred HHHHH-HhCCCChHHHhheecchhhcccCCC-CC-CCCCCcCCCCccccHHHHHHhcccceeeecCCCCCceeeccCC
Confidence 99999 99999999999999998 7999985 55 4599999999999999999998654333 345677755443
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=1.7e-35 Score=287.00 Aligned_cols=197 Identities=26% Similarity=0.371 Sum_probs=164.6
Q ss_pred HHHHHHHHHHHHhhHhhcCCchHHHHHHHhhhcCccccCCCCCCCCcc-ccChHHhhccCC--CchHHHHHHHHHHHHhC
Q 027606 12 YKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGT-MRLAAEQAHSAN--NGLDIAVRLLEPFKEQF 88 (221)
Q Consensus 12 v~~~v~~~~~~i~~~~~~~~~a~~llRL~FHDc~~~d~s~~~gG~dgS-i~~~~E~~~~~N--~gl~~~~~~i~~ik~~~ 88 (221)
|++.|...|++ ++.+.-.++.+||++||++.|||.++++||++|+ |+|.+|++++.| .+|.+++.++++||+++
T Consensus 430 v~~di~~lk~~---i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~pe~~w~~N~p~gL~~vl~~Le~Ik~~f 506 (716)
T TIGR00198 430 SEGDIKELKQQ---ILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLEPQKNWPVNEPTRLAKVLAVLEKIQAEF 506 (716)
T ss_pred HHHHHHHHHHH---HHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecchhcCcccCCHHHHHHHHHHHHHHHHHc
Confidence 36666666554 5666778999999999999999999999999996 999999999999 89999999999999999
Q ss_pred C--CCcHHHHHhhhcccceeec---CCC--CCCCCCCCCCCCCCC--CCCCCC---CC------------cCCHHHHHHH
Q 027606 89 P--TISYADLYQLAGVVGVEVT---GGP--DIPFHPGRDDKAEPP--QEGRLP---DA------------KQGNDHLRQV 144 (221)
Q Consensus 89 p--~VS~ADiialAa~~av~~~---GGP--~~~v~~GR~D~~~s~--~~~~lP---~p------------~~~~~~l~~~ 144 (221)
| .||.||+|+||+.+|||.+ ||| .|+|.+||.|.+... +++..| .+ ......|++.
T Consensus 507 ~~~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~td~~~~~~l~p~adgfRn~~~~~~~~~~~~~l~d~ 586 (716)
T TIGR00198 507 AKGPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMTDAESFTPLEPIADGFRNYLKRDYAVTPEELLLDK 586 (716)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCCCccccccCCCCCcccchhccccccCCHHHHHHHH
Confidence 9 8999999999999999999 897 689999999998752 332222 11 1234568999
Q ss_pred HHHhcCCCchhhhhhcccc-ccccccCCCCCCCCCCCCCCCcccHHHHHHHHhCCCCCc---cCcccccccCcC
Q 027606 145 FGAQMGLSDKDIVALSGGH-TLGRCHKERSGFEGPWTRNPLIFDNSYFTYVSLVSLPDM---FGCVLFESFCMN 214 (221)
Q Consensus 145 F~~~~Gls~~dlVaLsGaH-TiG~~h~~~~~~~g~~~~tp~~fDn~Yy~~ll~~~~~~~---~~~~l~~~~~~~ 214 (221)
| .++|||.+|||||+||| ++|++|. .+ +.|+|+.+|.+|||+||++|+.+++.+. .+..+|+.++.+
T Consensus 587 a-~~lglt~~EmvaL~Gg~r~lG~~~~-~s-~~G~~T~~p~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~ 657 (716)
T TIGR00198 587 A-QLLTLTAPEMTVLIGGMRVLGANHG-GS-KHGVFTDRVGVLSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQ 657 (716)
T ss_pred H-HhCCCChHHHHheecchhhccccCC-CC-CCCCCcCCCCccccHHHHHHhcCCceeeecCCCCceeeeecCC
Confidence 9 99999999999999995 9999996 33 4699999999999999999999764433 456778766543
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=2.4e-34 Score=277.93 Aligned_cols=194 Identities=27% Similarity=0.389 Sum_probs=162.8
Q ss_pred HHHHHHHHHHHhhHhhcCCchHHHHHHHhhhcCccccCCCCCCCCcc-ccChHHhhccCCC--chHHHHHHHHHHHHhC-
Q 027606 13 KKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGT-MRLAAEQAHSANN--GLDIAVRLLEPFKEQF- 88 (221)
Q Consensus 13 ~~~v~~~~~~i~~~~~~~~~a~~llRL~FHDc~~~d~s~~~gG~dgS-i~~~~E~~~~~N~--gl~~~~~~i~~ik~~~- 88 (221)
...|...|++ |+...-..+.+||++||++.|||.++++||++|+ |+|.+|++++.|+ +|.+++.++++||+++
T Consensus 438 ~~di~~lk~~---i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~ 514 (726)
T PRK15061 438 DADIAALKAK---ILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLAPQKDWEVNEPAQLAKVLAVLEGIQAEFN 514 (726)
T ss_pred HHHHHHHHHH---HHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecccccCccccCHHHHHHHHHHHHHHHHHHh
Confidence 3556666655 5566667999999999999999999999999986 9999999999999 9999999999999998
Q ss_pred ------CCCcHHHHHhhhcccceeec---CC--CCCCCCCCCCCCCCCC--CC---CCCCCCc------------CCHHH
Q 027606 89 ------PTISYADLYQLAGVVGVEVT---GG--PDIPFHPGRDDKAEPP--QE---GRLPDAK------------QGNDH 140 (221)
Q Consensus 89 ------p~VS~ADiialAa~~av~~~---GG--P~~~v~~GR~D~~~s~--~~---~~lP~p~------------~~~~~ 140 (221)
|.||.||+|+||+.+|||.+ || |.|||.+||.|.+... ++ .++|... .....
T Consensus 515 ~~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~td~esf~~l~P~Adgfrny~~~~~~~~~e~~ 594 (726)
T PRK15061 515 AAQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQTDVESFAVLEPKADGFRNYLKKGYSVSPEEL 594 (726)
T ss_pred hccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCCCcccccccCCCCccccccccccCCCCHHHH
Confidence 68999999999999999998 58 9999999999998753 22 2456543 12378
Q ss_pred HHHHHHHhcCCCchhhhhhcccc-ccccccCCCCCCCCCCCCCCCcccHHHHHHHHhCCCCCc---cCcccccccC
Q 027606 141 LRQVFGAQMGLSDKDIVALSGGH-TLGRCHKERSGFEGPWTRNPLIFDNSYFTYVSLVSLPDM---FGCVLFESFC 212 (221)
Q Consensus 141 l~~~F~~~~Gls~~dlVaLsGaH-TiG~~h~~~~~~~g~~~~tp~~fDn~Yy~~ll~~~~~~~---~~~~l~~~~~ 212 (221)
|++.| .++|||..|||||+||| ++|.+|. ++ +.|+|+.+|.+|||+||++|+.+++.+. .+..+|+.++
T Consensus 595 L~d~a-~~lglt~~EmvaL~Gg~r~Lg~~~~-~S-~~G~~T~~p~~fsNdfFvnLLdm~~~W~~~~~~~~~ye~~D 667 (726)
T PRK15061 595 LVDKA-QLLTLTAPEMTVLVGGLRVLGANYG-GS-KHGVFTDRPGVLTNDFFVNLLDMGTEWKPTDEDEEVYEGRD 667 (726)
T ss_pred HHHHH-HhCCCChHHHhheecchhhcccCCC-CC-CCCCCcCCCCccccHHHHHHhcCCceeeecCCCCCceeecc
Confidence 99999 99999999999999997 7899884 44 5699999999999999999998654332 3345777654
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.97 E-value=9.9e-31 Score=244.11 Aligned_cols=194 Identities=37% Similarity=0.615 Sum_probs=169.5
Q ss_pred hhHHHHHHHHHHHHHHhhHhhcC---------CchHHHHHHHhhhcCccccCCCCCCCC-ccccChHHhhccCCCchHHH
Q 027606 8 VSEDYKKAVEKCKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIA 77 (221)
Q Consensus 8 ~~~~v~~~v~~~~~~i~~~~~~~---------~~a~~llRL~FHDc~~~d~s~~~gG~d-gSi~~~~E~~~~~N~gl~~~ 77 (221)
+|+.-+-.+...+++|+++..+. ..+|.+|||+||-++||+...+.||.. |..+|.++.++|.|.+|+++
T Consensus 61 aeefk~lD~~Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~G~qRFaPlnSWPDN~nLDKa 140 (730)
T COG0376 61 AEEFKSLDLAAVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFAPLNSWPDNANLDKA 140 (730)
T ss_pred HHHhhhccHHHHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCCCceecccccCCCcccchHHH
Confidence 45555556777899999988776 378999999999999999999999998 58999999999999999999
Q ss_pred HHHHHHHHHhCC-CCcHHHHHhhhcccceeecCCCCCCCCCCCCCCCCCCC-----------------------------
Q 027606 78 VRLLEPFKEQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ----------------------------- 127 (221)
Q Consensus 78 ~~~i~~ik~~~p-~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~----------------------------- 127 (221)
+.++.+||.+|+ .||+||+|.|++.+|++.+|++.+.|..||.|...+..
T Consensus 141 rRLLWPIKkKYG~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~Plaav 220 (730)
T COG0376 141 RRLLWPIKKKYGRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAV 220 (730)
T ss_pred HHHhhhHhHhhcccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhh
Confidence 999999999999 89999999999999999999999999999999877532
Q ss_pred ---------C--CCCCCCcCCHHHHHHHHHHhcCCCchhhhhhc-cccccccccCCC-----------------------
Q 027606 128 ---------E--GRLPDAKQGNDHLRQVFGAQMGLSDKDIVALS-GGHTLGRCHKER----------------------- 172 (221)
Q Consensus 128 ---------~--~~lP~p~~~~~~l~~~F~~~~Gls~~dlVaLs-GaHTiG~~h~~~----------------------- 172 (221)
+ +..|+|..+..+++..| ++|+++.+|.|||+ ||||+|.+|...
T Consensus 221 qMGLIYVNPEGpng~PDpl~aA~dIRetF-aRMaMNDeETVALiaGGHtfGKtHGag~a~~vg~ePe~a~ie~qGlGW~~ 299 (730)
T COG0376 221 QMGLIYVNPEGPNGNPDPLAAARDIRETF-ARMAMNDEETVALIAGGHTFGKTHGAGPASNVGPEPEAAPIEQQGLGWAN 299 (730)
T ss_pred eeeeEEeCCCCCCCCCChhhhHHHHHHHH-HHhcCCcHhhhhhhhcccccccccCCCchhhcCCCccccchhhhcccccc
Confidence 2 23677778889999999 99999999999997 699999999642
Q ss_pred ------------CCCCCCCCCCCCcccHHHHHHHHhCCCCCc
Q 027606 173 ------------SGFEGPWTRNPLIFDNSYFTYVSLVSLPDM 202 (221)
Q Consensus 173 ------------~~~~g~~~~tp~~fDn~Yy~~ll~~~~~~~ 202 (221)
+|.+++|+.+|.+|||+||.+|+...|...
T Consensus 300 ~~g~G~G~dtitsGlE~~Wt~tPT~w~n~ff~~Lf~yEWelt 341 (730)
T COG0376 300 TYGSGKGPDTITSGLEGAWTTTPTQWSNEFFENLFNYEWELT 341 (730)
T ss_pred ccCCCcCcccccccccccCCCCcchhhhHHHHHHhccceeee
Confidence 122457999999999999999999876644
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.57 E-value=9e-15 Score=137.72 Aligned_cols=196 Identities=27% Similarity=0.369 Sum_probs=152.1
Q ss_pred HHHHHHHHHHHhhHhhcCCchHHHHHHHhhhcCccccCCCCCCCCc-cccChHHhhccCCCc--hHHHHHHHHHHHHhCC
Q 027606 13 KKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFG-TMRLAAEQAHSANNG--LDIAVRLLEPFKEQFP 89 (221)
Q Consensus 13 ~~~v~~~~~~i~~~~~~~~~a~~llRL~FHDc~~~d~s~~~gG~dg-Si~~~~E~~~~~N~g--l~~~~~~i~~ik~~~p 89 (221)
...|...|++ |+++.-....++-.+|--+.||..|.+.||++| .|++.+.++++.|.. |.+.+.+++.|.+.+.
T Consensus 448 d~di~~lK~~---IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLaPqkdWevN~P~~l~kvl~~le~iq~~fn 524 (730)
T COG0376 448 DADIAALKAK---ILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLAPQKDWEVNQPAELAKVLAVLEKIQKEFN 524 (730)
T ss_pred hHHHHHHHHH---HHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeecccccCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 4556555555 666666788999999999999999999999997 899999999999964 6688999999999987
Q ss_pred -CCcHHHHHhhhcccceeec---CCC--CCCCCCCCCCCCCCCC--C---CCCCC------------CcCCHHHHHHHHH
Q 027606 90 -TISYADLYQLAGVVGVEVT---GGP--DIPFHPGRDDKAEPPQ--E---GRLPD------------AKQGNDHLRQVFG 146 (221)
Q Consensus 90 -~VS~ADiialAa~~av~~~---GGP--~~~v~~GR~D~~~s~~--~---~~lP~------------p~~~~~~l~~~F~ 146 (221)
.||.||+|+|++..+|+.+ .|- .+||.+||.|++.... + -.-|- ....-.-|+++-
T Consensus 525 kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv~sf~~LeP~aDGfRNy~~~~~~~~pe~~LvDkA- 603 (730)
T COG0376 525 KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDVESFAVLEPIADGFRNYVKKDYVLTPEELLVDKA- 603 (730)
T ss_pred CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcchhhhhcccccchhhhhhccCCCcCCHHHHHHHHH-
Confidence 6999999999999999864 454 5678999999876421 0 00111 111224478888
Q ss_pred HhcCCCchhhhhhcccc-ccccccCCCCCCCCCCCCCCCcccHHHHHHHHhCCCCCc---cCcccccccCcC
Q 027606 147 AQMGLSDKDIVALSGGH-TLGRCHKERSGFEGPWTRNPLIFDNSYFTYVSLVSLPDM---FGCVLFESFCMN 214 (221)
Q Consensus 147 ~~~Gls~~dlVaLsGaH-TiG~~h~~~~~~~g~~~~tp~~fDn~Yy~~ll~~~~~~~---~~~~l~~~~~~~ 214 (221)
+-++||..||++|+||- -+|..+... -.|.++..|..+.|.||.||+.+...+. -+-.+||.++-+
T Consensus 604 qlL~LtapemtVLiGGlRvLg~n~g~s--~~GVfT~~pg~LtndFFvnLlDM~~~W~~~~~~~~~feg~Drk 673 (730)
T COG0376 604 QLLTLTAPEMTVLIGGLRVLGANYGGS--KHGVFTDRPGVLTNDFFVNLLDMGTEWKPTDDARGLFEGRDRK 673 (730)
T ss_pred HHhccCCccceEEEcceEeeccCCCCC--ccceeccCcccccchhhhhhhhccceeeeccccccceeccccc
Confidence 89999999999999986 456544211 2367889999999999999999886654 336799998655
No 19
>PF15656 Tox-HDC: Toxin with a H, D/N and C signature
Probab=44.43 E-value=15 Score=29.05 Aligned_cols=56 Identities=21% Similarity=0.210 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhcCCC--chhhhhhccccccccccCCCCCCCCCCCCCCCcccHHHHHHHHhC
Q 027606 138 NDHLRQVFGAQMGLS--DKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTYVSLV 197 (221)
Q Consensus 138 ~~~l~~~F~~~~Gls--~~dlVaLsGaHTiG~~h~~~~~~~g~~~~tp~~fDn~Yy~~ll~~ 197 (221)
+..-++.+ +++++ ..++++|||.| |..+..+.--.+..-..|..-+++||.+=+..
T Consensus 14 i~~pl~~I--ar~~s~~~~~I~IlSGtH--G~~~G~nw~~~~~~~R~p~l~e~~f~~eD~~~ 71 (119)
T PF15656_consen 14 INAPLETI--ARRPSGDNGDIHILSGTH--GYCSGQNWLSESNRLRRPGLKEKAFYKEDLRD 71 (119)
T ss_pred hHHHHHHH--HhCcCCCCCCEEEEeCCC--CCccccchhhccccccCchhhhhhHHHHHHHH
Confidence 34445555 45665 89999999988 44332111000111356888899998877654
No 20
>PRK13859 type IV secretion system lipoprotein VirB7; Provisional
Probab=29.64 E-value=37 Score=23.00 Aligned_cols=30 Identities=27% Similarity=0.380 Sum_probs=21.8
Q ss_pred HHhhhcc---cceeecCCCCCCCCCCCCCCCCC
Q 027606 96 LYQLAGV---VGVEVTGGPDIPFHPGRDDKAEP 125 (221)
Q Consensus 96 iialAa~---~av~~~GGP~~~v~~GR~D~~~s 125 (221)
+++||+. |-+..+.||.+++-.||--.+-+
T Consensus 9 ~l~La~CqT~D~lAtckGpiFpLNVgrWqptps 41 (55)
T PRK13859 9 ALALAGCQTNDTLASCKGPIFPLNVGRWQPTPS 41 (55)
T ss_pred HHHHHhccccCccccccCCccccccccccCChh
Confidence 4666664 45667899999999999665444
No 21
>PF08383 Maf_N: Maf N-terminal region; InterPro: IPR013592 This region is found in various leucine zipper transcription factors of the Maf family. These are implicated in the regulation of insulin gene expression [], in erythroid differentiation [], and in differentiation of the neuroretina [].
Probab=29.43 E-value=27 Score=21.73 Aligned_cols=15 Identities=47% Similarity=0.749 Sum_probs=12.0
Q ss_pred HhcCCCchhhh-hhcc
Q 027606 147 AQMGLSDKDIV-ALSG 161 (221)
Q Consensus 147 ~~~Gls~~dlV-aLsG 161 (221)
...|||++|.| ||+|
T Consensus 19 e~l~LtpEDAvEaLi~ 34 (35)
T PF08383_consen 19 EALGLTPEDAVEALIG 34 (35)
T ss_pred hhcCCCHHHHHHHHhc
Confidence 56799999988 6765
No 22
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=24.25 E-value=20 Score=36.23 Aligned_cols=53 Identities=21% Similarity=0.297 Sum_probs=34.3
Q ss_pred CCCCCcCCHHH-HHHHHHHhcCCCchhhhhhccccccccccCCCCCCCCCCCCCCCcccHHHHHHH
Q 027606 130 RLPDAKQGNDH-LRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTYV 194 (221)
Q Consensus 130 ~lP~p~~~~~~-l~~~F~~~~Gls~~dlVaLsGaHTiG~~h~~~~~~~g~~~~tp~~fDn~Yy~~l 194 (221)
++|+|.....+ -.+.. .+.-++.+|||++.|+--+| ||.++-.+||-+||-++
T Consensus 694 alpsp~~~~~q~~~~p~-~~l~~d~e~~vVivG~aEvg-----------pwGSsRTRfemE~~gel 747 (866)
T COG4982 694 ALPSPPRPFTQTPPQPR-ANLKVDFEDVVVIVGFAEVG-----------PWGSSRTRFEMEVEGEL 747 (866)
T ss_pred cCCCCCCCccCCCCCch-hhcccCHHHceEEecceecc-----------CccCccchhhhhhcccc
Confidence 56776654422 22233 66777779999999866544 66666677777777544
No 23
>PF09533 DUF2380: Predicted lipoprotein of unknown function (DUF2380); InterPro: IPR011755 This family consists of at least 9 paralogs in Myxococcus xanthus, a member of the Deltaproteobacteria. One appears truncated toward the N terminus; the others are predicted lipoproteins. The function is unknown.
Probab=22.91 E-value=79 Score=26.84 Aligned_cols=32 Identities=19% Similarity=0.224 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhcCCCchhhhhhccccccccccC
Q 027606 138 NDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHK 170 (221)
Q Consensus 138 ~~~l~~~F~~~~Gls~~dlVaLsGaHTiG~~h~ 170 (221)
..+|...| .++|+++.|.++++..|.--+.|.
T Consensus 107 a~~la~wF-~~~Gi~IHd~ti~Ip~~vH~rIH~ 138 (188)
T PF09533_consen 107 AEELAEWF-ERRGIDIHDYTIPIPRDVHRRIHG 138 (188)
T ss_pred cHHHHHHH-HHcCCChhheeEecCHHHHHHhhC
Confidence 45799999 999999999999998776556664
No 24
>PTZ00411 transaldolase-like protein; Provisional
Probab=21.65 E-value=72 Score=29.48 Aligned_cols=57 Identities=18% Similarity=0.168 Sum_probs=36.6
Q ss_pred cCCCCCCCCCCCCCCCCCCCC--CCC-CCCcC---CHHHHHHHHHHhcCCC----------chhhhhhcccccc
Q 027606 108 TGGPDIPFHPGRDDKAEPPQE--GRL-PDAKQ---GNDHLRQVFGAQMGLS----------DKDIVALSGGHTL 165 (221)
Q Consensus 108 ~GGP~~~v~~GR~D~~~s~~~--~~l-P~p~~---~~~~l~~~F~~~~Gls----------~~dlVaLsGaHTi 165 (221)
+|-..+..++||.+.+.-.+. ... +...+ .+.++.+.| +..|+. ..|+..|.|+|.+
T Consensus 180 AGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~-k~~g~~T~Im~ASfRn~~qi~~laG~D~l 252 (333)
T PTZ00411 180 AGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYY-KKHGYKTIVMGASFRNTGEILELAGCDKL 252 (333)
T ss_pred cCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHH-HHcCCCeEEEecccCCHHHHHHHHCCCEE
Confidence 366788899999977643221 112 22222 356778888 777764 5677888899843
No 25
>TIGR01911 HesB_rel_seleno HesB-like selenoprotein. This model represents a family of small proteins related to HesB and its close homologs, which are likely to be invovlved in iron-sulfur cluster assembly (See TIGR00049 and pfam01521). Several members are selenoproteins, with a TGA codon and Sec residue that aligns to the conserved Cys of the HesB domain. A variable Cys/Ser/Gly-rich C-terminal region is not included in the seed alignment and model.
Probab=21.40 E-value=25 Score=26.07 Aligned_cols=32 Identities=19% Similarity=0.417 Sum_probs=19.8
Q ss_pred HHHHHHHhhHhhcCCchHHHHHHHhhhcCccccCCCCCCCCc
Q 027606 17 EKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFG 58 (221)
Q Consensus 17 ~~~~~~i~~~~~~~~~a~~llRL~FHDc~~~d~s~~~gG~dg 58 (221)
++|.++|++++++....+..||+.+- .|||.|
T Consensus 8 ~~A~~~i~~ll~~~~~~~~~LRi~v~----------~gGCsG 39 (92)
T TIGR01911 8 DDAYEEFKDFLKENDIDNDVIRIHFA----------GMGCMG 39 (92)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEEe----------CCCccC
Confidence 34566667677554343345888662 388988
Done!