Query 027609
Match_columns 221
No_of_seqs 194 out of 658
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 21:17:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027609.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027609hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hnr_A Probable methyltransfer 99.7 1E-16 3.6E-21 131.7 11.6 141 60-206 34-212 (220)
2 2p7i_A Hypothetical protein; p 99.6 5.5E-16 1.9E-20 127.9 9.8 96 70-171 42-142 (250)
3 3dlc_A Putative S-adenosyl-L-m 99.6 1E-15 3.5E-20 124.2 11.0 129 73-206 46-214 (219)
4 4hg2_A Methyltransferase type 99.6 1.2E-16 4.2E-21 139.0 5.1 94 71-170 40-135 (257)
5 3dh0_A SAM dependent methyltra 99.6 6.6E-16 2.3E-20 126.8 9.1 135 69-206 36-193 (219)
6 3e8s_A Putative SAM dependent 99.6 2.1E-15 7.3E-20 123.0 10.8 132 69-206 51-227 (227)
7 1vl5_A Unknown conserved prote 99.6 5.8E-16 2E-20 131.0 7.3 97 68-170 35-140 (260)
8 3ou2_A SAM-dependent methyltra 99.6 2.7E-15 9.1E-20 122.3 10.8 95 70-171 46-147 (218)
9 3i9f_A Putative type 11 methyl 99.6 2.2E-15 7.6E-20 119.3 9.7 135 69-212 16-166 (170)
10 4gek_A TRNA (CMO5U34)-methyltr 99.6 6.4E-16 2.2E-20 134.4 7.1 102 70-171 70-179 (261)
11 4e2x_A TCAB9; kijanose, tetron 99.6 3.4E-16 1.2E-20 142.1 5.3 144 44-192 80-250 (416)
12 3g5l_A Putative S-adenosylmeth 99.6 3.4E-15 1.2E-19 125.6 10.6 102 66-172 40-147 (253)
13 3cc8_A Putative methyltransfer 99.6 2.7E-15 9.3E-20 122.6 9.5 100 69-172 31-132 (230)
14 2aot_A HMT, histamine N-methyl 99.6 1.3E-15 4.5E-20 132.1 8.0 100 69-170 51-172 (292)
15 3jwg_A HEN1, methyltransferase 99.6 1.2E-14 4.2E-19 119.7 13.2 134 69-206 28-210 (219)
16 1kpg_A CFA synthase;, cyclopro 99.6 2.7E-15 9.1E-20 128.7 9.4 97 68-171 62-169 (287)
17 3h2b_A SAM-dependent methyltra 99.6 6.8E-15 2.3E-19 119.6 11.4 130 71-205 42-194 (203)
18 3pfg_A N-methyltransferase; N, 99.6 4.6E-15 1.6E-19 125.7 10.3 133 70-207 50-250 (263)
19 4htf_A S-adenosylmethionine-de 99.6 2.8E-15 9.7E-20 128.6 9.1 96 71-171 69-174 (285)
20 2xvm_A Tellurite resistance pr 99.6 5.1E-15 1.7E-19 119.0 9.9 117 69-192 31-170 (199)
21 3ujc_A Phosphoethanolamine N-m 99.6 5.8E-15 2E-19 123.7 10.6 98 67-170 52-159 (266)
22 1y8c_A S-adenosylmethionine-de 99.6 9.1E-15 3.1E-19 120.9 11.5 95 70-169 37-141 (246)
23 3dli_A Methyltransferase; PSI- 99.6 1.1E-15 3.8E-20 128.1 5.3 117 70-190 41-179 (240)
24 3e23_A Uncharacterized protein 99.6 9.3E-15 3.2E-19 119.7 10.4 117 70-191 43-178 (211)
25 3ccf_A Cyclopropane-fatty-acyl 99.6 6E-15 2E-19 126.5 9.5 99 67-171 54-155 (279)
26 1nkv_A Hypothetical protein YJ 99.6 1.8E-15 6.3E-20 126.9 6.1 116 69-190 35-182 (256)
27 1xxl_A YCGJ protein; structura 99.6 3.9E-15 1.3E-19 125.2 8.0 104 60-171 13-125 (239)
28 1xtp_A LMAJ004091AAA; SGPP, st 99.6 3.8E-15 1.3E-19 124.5 7.8 123 66-192 89-235 (254)
29 2o57_A Putative sarcosine dime 99.6 5.1E-15 1.8E-19 127.5 8.5 98 68-171 80-188 (297)
30 2fk8_A Methoxy mycolic acid sy 99.6 1.1E-14 3.7E-19 127.1 9.6 98 67-171 87-195 (318)
31 3hem_A Cyclopropane-fatty-acyl 99.5 6.8E-15 2.3E-19 127.7 7.9 97 68-171 70-184 (302)
32 3l8d_A Methyltransferase; stru 99.5 5.2E-15 1.8E-19 122.9 6.8 115 70-190 53-195 (242)
33 3dtn_A Putative methyltransfer 99.5 2.8E-14 9.5E-19 118.4 11.0 98 69-170 43-148 (234)
34 3bxo_A N,N-dimethyltransferase 99.5 2.7E-14 9.3E-19 118.1 10.6 114 50-170 21-141 (239)
35 2ex4_A Adrenal gland protein A 99.5 1.3E-14 4.5E-19 121.6 8.7 118 70-192 79-222 (241)
36 2gs9_A Hypothetical protein TT 99.5 7.5E-15 2.6E-19 120.0 6.9 95 70-172 36-134 (211)
37 3mti_A RRNA methylase; SAM-dep 99.5 5.1E-14 1.7E-18 113.1 11.5 133 70-205 22-183 (185)
38 2p35_A Trans-aconitate 2-methy 99.5 3.7E-14 1.3E-18 118.8 11.1 98 68-171 31-133 (259)
39 3bkw_A MLL3908 protein, S-aden 99.5 1.4E-14 4.8E-19 120.1 8.4 101 68-173 41-147 (243)
40 3ocj_A Putative exported prote 99.5 1.5E-14 5.2E-19 126.1 9.0 134 70-206 118-304 (305)
41 3bus_A REBM, methyltransferase 99.5 1E-14 3.5E-19 123.7 7.5 97 68-170 59-166 (273)
42 1pjz_A Thiopurine S-methyltran 99.5 2.9E-15 1E-19 124.1 4.0 117 70-191 22-172 (203)
43 1dus_A MJ0882; hypothetical pr 99.5 3.1E-14 1.1E-18 113.1 9.8 130 70-205 52-193 (194)
44 3ofk_A Nodulation protein S; N 99.5 9.2E-15 3.2E-19 119.9 6.9 101 66-172 47-156 (216)
45 3cgg_A SAM-dependent methyltra 99.5 8.6E-14 2.9E-18 110.6 12.2 132 70-206 46-195 (195)
46 3ege_A Putative methyltransfer 99.5 9.3E-15 3.2E-19 124.6 6.8 97 69-171 33-131 (261)
47 2i62_A Nicotinamide N-methyltr 99.5 1E-14 3.6E-19 122.3 6.9 119 69-191 55-235 (265)
48 3thr_A Glycine N-methyltransfe 99.5 6.4E-15 2.2E-19 126.4 5.4 98 70-172 57-177 (293)
49 3jwh_A HEN1; methyltransferase 99.5 2.1E-14 7.1E-19 118.4 8.3 101 70-173 29-144 (217)
50 2a14_A Indolethylamine N-methy 99.5 1.9E-14 6.5E-19 123.5 8.3 120 69-190 54-233 (263)
51 3sm3_A SAM-dependent methyltra 99.5 5.4E-14 1.8E-18 115.5 10.3 96 70-171 30-142 (235)
52 3kkz_A Uncharacterized protein 99.5 5E-14 1.7E-18 119.8 10.1 116 69-190 45-191 (267)
53 2avn_A Ubiquinone/menaquinone 99.5 2.5E-14 8.6E-19 121.6 8.3 99 70-173 54-155 (260)
54 2yqz_A Hypothetical protein TT 99.5 1.9E-14 6.4E-19 120.6 7.3 95 69-169 38-140 (263)
55 2zfu_A Nucleomethylin, cerebra 99.5 1E-13 3.5E-18 113.8 11.5 121 69-206 66-191 (215)
56 3lcc_A Putative methyl chlorid 99.5 8.4E-14 2.9E-18 116.0 10.9 116 72-192 68-204 (235)
57 3gu3_A Methyltransferase; alph 99.5 1.6E-14 5.5E-19 124.8 6.8 101 69-172 21-128 (284)
58 3mgg_A Methyltransferase; NYSG 99.5 1.9E-14 6.4E-19 122.5 6.9 98 69-170 36-142 (276)
59 3orh_A Guanidinoacetate N-meth 99.5 1.3E-14 4.5E-19 123.2 5.8 99 69-170 59-170 (236)
60 1vlm_A SAM-dependent methyltra 99.5 3.7E-14 1.2E-18 117.5 8.3 110 71-190 48-183 (219)
61 2g72_A Phenylethanolamine N-me 99.5 3.4E-14 1.2E-18 122.6 8.2 118 70-190 71-251 (289)
62 3d2l_A SAM-dependent methyltra 99.5 1.9E-13 6.6E-18 113.2 11.6 93 71-169 34-136 (243)
63 3m70_A Tellurite resistance pr 99.5 1.1E-13 3.7E-18 118.8 10.1 116 70-192 120-257 (286)
64 3f4k_A Putative methyltransfer 99.5 3.1E-14 1E-18 119.5 6.3 116 70-191 46-192 (257)
65 4fsd_A Arsenic methyltransfera 99.5 2.3E-14 7.7E-19 129.9 5.4 118 69-190 82-246 (383)
66 3i53_A O-methyltransferase; CO 99.5 3E-13 1E-17 119.2 12.4 135 66-205 165-331 (332)
67 3grz_A L11 mtase, ribosomal pr 99.5 1.8E-13 6.2E-18 111.8 10.0 124 70-203 60-193 (205)
68 2gb4_A Thiopurine S-methyltran 99.5 7.1E-14 2.4E-18 120.9 6.8 117 70-191 68-223 (252)
69 1ve3_A Hypothetical protein PH 99.5 1.6E-13 5.5E-18 112.5 8.5 96 71-172 39-144 (227)
70 3iv6_A Putative Zn-dependent a 99.4 1.5E-13 5.2E-18 120.6 8.6 99 68-171 43-149 (261)
71 2vdw_A Vaccinia virus capping 99.4 3.8E-14 1.3E-18 125.6 4.7 101 70-172 48-171 (302)
72 2pxx_A Uncharacterized protein 99.4 2.6E-13 8.9E-18 109.9 9.2 131 70-205 42-197 (215)
73 3mcz_A O-methyltransferase; ad 99.4 3.1E-13 1.1E-17 119.6 10.4 138 66-206 174-349 (352)
74 1qzz_A RDMB, aclacinomycin-10- 99.4 4.6E-13 1.6E-17 119.2 11.5 137 67-208 179-358 (374)
75 2p8j_A S-adenosylmethionine-de 99.4 1.2E-13 4.1E-18 112.2 7.0 96 71-171 24-129 (209)
76 3g5t_A Trans-aconitate 3-methy 99.4 1.1E-13 3.8E-18 119.9 7.0 94 69-168 35-147 (299)
77 1zx0_A Guanidinoacetate N-meth 99.4 4.9E-14 1.7E-18 118.3 4.5 100 70-172 60-172 (236)
78 3hm2_A Precorrin-6Y C5,15-meth 99.4 5.5E-13 1.9E-17 105.5 10.2 116 69-190 24-148 (178)
79 3ggd_A SAM-dependent methyltra 99.4 8.5E-14 2.9E-18 116.5 5.7 98 70-171 56-164 (245)
80 2kw5_A SLR1183 protein; struct 99.4 1E-13 3.5E-18 112.6 5.8 110 73-191 32-167 (202)
81 3hp7_A Hemolysin, putative; st 99.4 1.1E-12 3.7E-17 117.2 12.9 131 70-206 85-250 (291)
82 3vc1_A Geranyl diphosphate 2-C 99.4 2E-13 6.8E-18 119.4 7.7 96 68-170 115-221 (312)
83 2ip2_A Probable phenazine-spec 99.4 1.8E-12 6E-17 114.0 13.7 135 66-205 164-333 (334)
84 3e05_A Precorrin-6Y C5,15-meth 99.4 1.1E-12 3.7E-17 107.3 11.2 117 68-190 38-163 (204)
85 1tw3_A COMT, carminomycin 4-O- 99.4 8.2E-13 2.8E-17 117.2 11.2 137 66-206 179-356 (360)
86 3eey_A Putative rRNA methylase 99.4 8.7E-13 3E-17 106.8 10.4 134 71-207 23-189 (197)
87 1x19_A CRTF-related protein; m 99.4 9E-13 3.1E-17 117.5 11.5 137 66-206 186-359 (359)
88 4dzr_A Protein-(glutamine-N5) 99.4 2.3E-13 8E-18 109.9 6.8 137 69-206 29-205 (215)
89 3evz_A Methyltransferase; NYSG 99.4 1.3E-12 4.5E-17 108.2 11.2 133 70-205 55-219 (230)
90 3dp7_A SAM-dependent methyltra 99.4 2.1E-13 7.2E-18 122.6 6.9 101 69-170 178-287 (363)
91 1ri5_A MRNA capping enzyme; me 99.4 2.2E-13 7.4E-18 116.1 5.8 100 70-173 64-177 (298)
92 2b3t_A Protein methyltransfera 99.4 8.8E-13 3E-17 113.6 9.6 131 70-205 109-275 (276)
93 3gwz_A MMCR; methyltransferase 99.4 1.9E-12 6.4E-17 116.6 12.0 135 66-205 198-368 (369)
94 3bkx_A SAM-dependent methyltra 99.4 9.3E-13 3.2E-17 111.7 9.2 101 68-170 41-159 (275)
95 2ld4_A Anamorsin; methyltransf 99.4 5.5E-13 1.9E-17 106.7 7.4 128 66-213 8-175 (176)
96 1nt2_A Fibrillarin-like PRE-rR 99.4 2E-12 7E-17 108.3 11.1 96 70-169 57-160 (210)
97 3lst_A CALO1 methyltransferase 99.4 1.5E-12 5E-17 116.1 10.6 134 66-205 180-347 (348)
98 1wzn_A SAM-dependent methyltra 99.4 1.1E-12 3.6E-17 110.0 8.9 99 69-172 40-147 (252)
99 3g07_A 7SK snRNA methylphospha 99.4 2.4E-13 8.2E-18 118.6 5.0 101 69-171 45-221 (292)
100 1ej0_A FTSJ; methyltransferase 99.4 1.8E-12 6.3E-17 100.6 8.9 129 70-205 22-177 (180)
101 1xdz_A Methyltransferase GIDB; 99.4 5.2E-12 1.8E-16 106.4 12.4 134 70-210 70-223 (240)
102 2nxc_A L11 mtase, ribosomal pr 99.4 1.5E-12 5.1E-17 111.8 9.0 126 70-205 120-254 (254)
103 3bgv_A MRNA CAP guanine-N7 met 99.4 6.3E-13 2.1E-17 116.0 6.7 101 70-173 34-158 (313)
104 3q87_B N6 adenine specific DNA 99.4 3.2E-12 1.1E-16 103.0 10.3 125 71-205 24-161 (170)
105 3g2m_A PCZA361.24; SAM-depende 99.4 4.2E-13 1.4E-17 116.2 5.4 96 72-172 84-192 (299)
106 2yxd_A Probable cobalt-precorr 99.4 8.5E-12 2.9E-16 98.3 12.5 110 70-192 35-154 (183)
107 2r3s_A Uncharacterized protein 99.3 2.7E-12 9.4E-17 112.2 10.0 135 69-206 164-335 (335)
108 2plw_A Ribosomal RNA methyltra 99.3 1.9E-12 6.4E-17 105.0 8.3 130 71-205 23-195 (201)
109 1l3i_A Precorrin-6Y methyltran 99.3 2.4E-12 8.1E-17 102.0 8.7 114 69-190 32-155 (192)
110 3lpm_A Putative methyltransfer 99.3 1.1E-11 3.7E-16 105.8 13.0 119 70-190 49-196 (259)
111 1jsx_A Glucose-inhibited divis 99.3 2E-12 6.8E-17 105.3 7.7 125 71-206 66-205 (207)
112 3p9n_A Possible methyltransfer 99.3 8.4E-13 2.9E-17 106.9 5.5 101 70-172 44-155 (189)
113 3opn_A Putative hemolysin; str 99.3 6E-12 2E-16 107.7 10.7 129 70-206 37-202 (232)
114 1fp1_D Isoliquiritigenin 2'-O- 99.3 5.8E-13 2E-17 119.7 3.8 97 68-170 207-306 (372)
115 3m33_A Uncharacterized protein 99.3 1.5E-12 5.2E-17 108.6 5.6 110 70-190 48-162 (226)
116 3g89_A Ribosomal RNA small sub 99.3 1.3E-11 4.5E-16 106.2 11.5 135 69-210 79-233 (249)
117 3njr_A Precorrin-6Y methylase; 99.3 1.9E-11 6.6E-16 101.5 12.0 112 69-190 54-175 (204)
118 3fpf_A Mtnas, putative unchara 99.3 3.4E-12 1.2E-16 114.6 7.5 126 69-206 121-264 (298)
119 1fp2_A Isoflavone O-methyltran 99.3 1.7E-12 5.6E-17 115.7 4.6 97 69-171 187-289 (352)
120 3u81_A Catechol O-methyltransf 99.3 1E-11 3.4E-16 103.3 9.0 135 70-206 58-213 (221)
121 1yzh_A TRNA (guanine-N(7)-)-me 99.3 1.7E-11 5.9E-16 101.2 10.4 119 70-191 41-178 (214)
122 2fca_A TRNA (guanine-N(7)-)-me 99.3 1.1E-11 3.7E-16 103.4 9.1 118 70-190 38-174 (213)
123 3tfw_A Putative O-methyltransf 99.3 2.8E-11 9.4E-16 103.2 11.6 133 70-206 63-225 (248)
124 3reo_A (ISO)eugenol O-methyltr 99.3 2.3E-12 8E-17 116.2 5.0 99 68-171 201-301 (368)
125 3p2e_A 16S rRNA methylase; met 99.3 3.2E-12 1.1E-16 108.4 5.5 98 70-168 24-137 (225)
126 3q7e_A Protein arginine N-meth 99.3 5.6E-12 1.9E-16 113.3 7.4 96 70-169 66-172 (349)
127 1yb2_A Hypothetical protein TA 99.3 8.2E-12 2.8E-16 107.6 7.8 112 67-190 107-232 (275)
128 2qe6_A Uncharacterized protein 99.3 3.9E-12 1.3E-16 110.9 5.8 102 69-172 76-198 (274)
129 1fbn_A MJ fibrillarin homologu 99.3 9.1E-12 3.1E-16 104.3 7.5 129 69-206 73-228 (230)
130 3dxy_A TRNA (guanine-N(7)-)-me 99.3 5.7E-12 1.9E-16 106.3 6.3 118 70-189 34-171 (218)
131 3duw_A OMT, O-methyltransferas 99.3 1.6E-11 5.3E-16 101.5 8.7 133 70-206 58-222 (223)
132 2oxt_A Nucleoside-2'-O-methylt 99.3 1.5E-12 5.2E-17 113.8 2.7 96 70-171 74-186 (265)
133 3r0q_C Probable protein argini 99.3 1.2E-11 3.9E-16 112.4 8.6 99 68-170 61-169 (376)
134 2pjd_A Ribosomal RNA small sub 99.2 5.3E-12 1.8E-16 112.7 6.2 129 70-206 196-337 (343)
135 3ckk_A TRNA (guanine-N(7)-)-me 99.2 8.7E-12 3E-16 106.4 7.1 118 70-189 46-189 (235)
136 3mq2_A 16S rRNA methyltransfer 99.2 1E-11 3.5E-16 102.2 7.0 118 69-191 26-180 (218)
137 3p9c_A Caffeic acid O-methyltr 99.2 4.7E-12 1.6E-16 114.3 4.9 99 68-171 199-299 (364)
138 2ift_A Putative methylase HI07 99.2 8.9E-12 3E-16 102.9 6.2 126 71-205 54-193 (201)
139 2vdv_E TRNA (guanine-N(7)-)-me 99.2 9.8E-12 3.4E-16 105.3 6.4 111 70-187 49-191 (246)
140 2frn_A Hypothetical protein PH 99.2 1.1E-11 3.7E-16 107.9 6.7 112 71-191 126-253 (278)
141 3tr6_A O-methyltransferase; ce 99.2 2.3E-11 7.9E-16 100.4 8.0 131 70-206 64-224 (225)
142 2fyt_A Protein arginine N-meth 99.2 2.1E-11 7.2E-16 109.3 8.3 95 68-167 62-168 (340)
143 2nyu_A Putative ribosomal RNA 99.2 1.2E-11 4.3E-16 99.5 5.8 130 71-205 23-186 (196)
144 2y1w_A Histone-arginine methyl 99.2 1.6E-11 5.4E-16 110.2 7.0 98 68-169 48-154 (348)
145 3mb5_A SAM-dependent methyltra 99.2 2.6E-11 8.9E-16 102.0 7.8 113 67-189 90-216 (255)
146 1zg3_A Isoflavanone 4'-O-methy 99.2 6E-12 2.1E-16 112.3 3.9 96 70-171 193-294 (358)
147 3ntv_A MW1564 protein; rossman 99.2 5.3E-11 1.8E-15 100.1 9.3 95 70-169 71-175 (232)
148 3dmg_A Probable ribosomal RNA 99.2 3E-11 1E-15 110.7 8.4 125 70-205 233-372 (381)
149 4a6d_A Hydroxyindole O-methylt 99.2 8.3E-11 2.8E-15 105.6 11.2 138 66-207 175-347 (353)
150 3dou_A Ribosomal RNA large sub 99.2 7.7E-11 2.6E-15 97.5 9.9 129 70-206 25-181 (191)
151 1vbf_A 231AA long hypothetical 99.2 1.2E-11 4E-16 102.5 5.0 94 68-172 68-167 (231)
152 3htx_A HEN1; HEN1, small RNA m 99.2 3.2E-11 1.1E-15 121.2 9.0 99 70-172 721-836 (950)
153 2esr_A Methyltransferase; stru 99.2 6.9E-12 2.4E-16 99.9 3.3 99 70-172 31-140 (177)
154 3lbf_A Protein-L-isoaspartate 99.2 2E-11 6.9E-16 99.7 6.1 94 68-172 75-176 (210)
155 2p41_A Type II methyltransfera 99.2 2.8E-11 9.6E-16 107.7 7.4 100 70-171 82-192 (305)
156 3gdh_A Trimethylguanosine synt 99.2 7.3E-13 2.5E-17 110.7 -2.8 95 70-170 78-181 (241)
157 1ws6_A Methyltransferase; stru 99.2 5.5E-12 1.9E-16 98.8 2.4 97 70-172 41-149 (171)
158 2wa2_A Non-structural protein 99.2 8E-12 2.7E-16 109.9 3.6 94 70-171 82-194 (276)
159 3id6_C Fibrillarin-like rRNA/T 99.2 3.6E-11 1.2E-15 103.8 7.6 135 68-207 74-232 (232)
160 1g8a_A Fibrillarin-like PRE-rR 99.2 8.3E-11 2.9E-15 97.5 9.5 132 69-206 72-227 (227)
161 3bzb_A Uncharacterized protein 99.2 4.6E-11 1.6E-15 103.9 8.2 119 70-191 79-233 (281)
162 2fpo_A Methylase YHHF; structu 99.2 4.1E-11 1.4E-15 99.0 7.5 127 70-205 54-191 (202)
163 2pwy_A TRNA (adenine-N(1)-)-me 99.2 4E-11 1.4E-15 100.5 7.5 113 68-189 94-218 (258)
164 1af7_A Chemotaxis receptor met 99.2 2.4E-11 8.2E-16 107.1 6.3 100 71-172 106-254 (274)
165 1nv8_A HEMK protein; class I a 99.2 2.8E-11 9.5E-16 106.2 6.1 127 71-206 124-282 (284)
166 3bwc_A Spermidine synthase; SA 99.1 9.6E-11 3.3E-15 103.5 9.2 136 69-206 94-258 (304)
167 3sso_A Methyltransferase; macr 99.1 6.3E-12 2.2E-16 117.5 1.6 121 60-189 206-361 (419)
168 4df3_A Fibrillarin-like rRNA/T 99.1 3.8E-11 1.3E-15 104.0 6.3 101 66-170 73-182 (233)
169 1g6q_1 HnRNP arginine N-methyl 99.1 7.3E-11 2.5E-15 105.0 8.2 96 70-168 38-143 (328)
170 4dcm_A Ribosomal RNA large sub 99.1 1.8E-10 6.1E-15 105.1 10.6 113 70-183 222-349 (375)
171 3dr5_A Putative O-methyltransf 99.1 9.2E-11 3.2E-15 99.1 8.0 130 71-207 57-214 (221)
172 2fhp_A Methylase, putative; al 99.1 1.9E-11 6.5E-16 97.3 2.7 99 70-172 44-156 (187)
173 2ipx_A RRNA 2'-O-methyltransfe 99.1 2.5E-10 8.4E-15 95.4 9.5 130 70-205 77-231 (233)
174 3r3h_A O-methyltransferase, SA 99.1 3.2E-10 1.1E-14 96.8 10.0 131 70-206 60-220 (242)
175 1o9g_A RRNA methyltransferase; 99.1 8.7E-11 3E-15 99.3 6.3 99 70-172 51-216 (250)
176 3adn_A Spermidine synthase; am 99.1 6.3E-10 2.1E-14 98.5 11.6 136 69-207 82-246 (294)
177 2yxe_A Protein-L-isoaspartate 99.1 4.9E-11 1.7E-15 97.8 4.0 95 68-172 75-179 (215)
178 2ozv_A Hypothetical protein AT 99.1 7.9E-10 2.7E-14 95.0 11.7 118 70-189 36-188 (260)
179 1p91_A Ribosomal RNA large sub 99.1 1E-10 3.5E-15 99.2 5.9 91 69-172 84-180 (269)
180 3fzg_A 16S rRNA methylase; met 99.1 6.4E-11 2.2E-15 101.0 4.4 140 59-205 39-197 (200)
181 1o54_A SAM-dependent O-methylt 99.1 2.4E-10 8.3E-15 98.1 8.1 112 68-189 110-233 (277)
182 1ixk_A Methyltransferase; open 99.1 1.9E-10 6.3E-15 102.1 7.6 122 67-189 115-269 (315)
183 2bm8_A Cephalosporin hydroxyla 99.1 1E-10 3.4E-15 99.6 5.2 114 71-189 82-213 (236)
184 2yvl_A TRMI protein, hypotheti 99.1 2.5E-10 8.7E-15 95.0 7.5 107 69-188 90-208 (248)
185 2hnk_A SAM-dependent O-methylt 99.1 1.4E-10 4.9E-15 97.3 6.1 132 70-207 60-232 (239)
186 3uwp_A Histone-lysine N-methyl 99.1 1E-10 3.6E-15 109.7 5.3 99 67-171 170-289 (438)
187 2gpy_A O-methyltransferase; st 99.1 1.1E-10 3.8E-15 97.3 4.9 97 70-171 54-161 (233)
188 1i9g_A Hypothetical protein RV 99.0 3.9E-10 1.3E-14 96.1 8.3 110 68-188 97-223 (280)
189 3c3p_A Methyltransferase; NP_9 99.0 2.1E-10 7.2E-15 94.2 6.2 97 70-171 56-161 (210)
190 2igt_A SAM dependent methyltra 99.0 4.4E-10 1.5E-14 101.0 8.7 116 70-190 153-299 (332)
191 1dl5_A Protein-L-isoaspartate 99.0 1.3E-10 4.3E-15 102.6 4.7 96 69-172 74-177 (317)
192 2avd_A Catechol-O-methyltransf 99.0 4.5E-10 1.5E-14 92.8 7.3 131 70-206 69-229 (229)
193 3b3j_A Histone-arginine methyl 99.0 2.1E-10 7.1E-15 108.1 5.6 98 68-169 156-262 (480)
194 1jg1_A PIMT;, protein-L-isoasp 99.0 1.1E-10 3.9E-15 97.7 3.1 93 68-172 89-191 (235)
195 1mjf_A Spermidine synthase; sp 99.0 7.5E-10 2.6E-14 96.6 8.3 133 70-206 75-239 (281)
196 3cbg_A O-methyltransferase; cy 99.0 3.3E-10 1.1E-14 95.4 5.8 131 70-206 72-232 (232)
197 2b25_A Hypothetical protein; s 99.0 2.6E-10 8.8E-15 100.9 5.3 98 68-172 103-221 (336)
198 1iy9_A Spermidine synthase; ro 99.0 1.6E-09 5.3E-14 94.6 10.1 136 70-207 75-237 (275)
199 1ne2_A Hypothetical protein TA 99.0 1.2E-09 4.2E-14 88.8 8.6 111 70-190 51-165 (200)
200 1u2z_A Histone-lysine N-methyl 99.0 3.7E-10 1.3E-14 105.7 5.8 98 68-171 240-360 (433)
201 1inl_A Spermidine synthase; be 99.0 1.9E-09 6.6E-14 94.9 10.1 135 70-207 90-253 (296)
202 1xj5_A Spermidine synthase 1; 99.0 4.7E-10 1.6E-14 101.2 5.8 100 69-169 119-234 (334)
203 2cmg_A Spermidine synthase; tr 99.0 2.4E-09 8.3E-14 93.2 10.1 125 70-207 72-217 (262)
204 1uir_A Polyamine aminopropyltr 99.0 7.8E-10 2.7E-14 98.2 6.9 136 70-207 77-243 (314)
205 1i1n_A Protein-L-isoaspartate 99.0 2.3E-10 8E-15 94.5 3.2 94 69-172 76-184 (226)
206 2o07_A Spermidine synthase; st 98.9 1.4E-09 4.9E-14 96.4 8.0 136 69-206 94-256 (304)
207 3tma_A Methyltransferase; thum 98.9 1.9E-09 6.6E-14 96.2 8.5 135 67-205 200-353 (354)
208 1sui_A Caffeoyl-COA O-methyltr 98.9 5.1E-10 1.7E-14 95.8 3.9 96 70-170 79-190 (247)
209 3gjy_A Spermidine synthase; AP 98.9 4.1E-09 1.4E-13 95.1 10.0 134 72-208 91-249 (317)
210 1wy7_A Hypothetical protein PH 98.9 7.3E-09 2.5E-13 84.2 10.5 116 69-191 48-171 (207)
211 2i7c_A Spermidine synthase; tr 98.9 3.8E-09 1.3E-13 92.4 9.3 136 69-206 77-239 (283)
212 3c3y_A Pfomt, O-methyltransfer 98.9 1.3E-09 4.6E-14 92.2 6.1 96 70-170 70-181 (237)
213 2b2c_A Spermidine synthase; be 98.9 2E-09 6.9E-14 96.2 7.5 135 70-206 108-269 (314)
214 2h00_A Methyltransferase 10 do 98.9 2.6E-10 8.8E-15 96.3 1.3 100 70-170 65-192 (254)
215 2pbf_A Protein-L-isoaspartate 98.9 8.8E-10 3E-14 91.1 4.3 95 70-172 80-195 (227)
216 2pt6_A Spermidine synthase; tr 98.9 4.1E-09 1.4E-13 94.1 9.0 135 70-207 116-278 (321)
217 1r18_A Protein-L-isoaspartate( 98.9 4.7E-10 1.6E-14 93.3 2.5 93 70-172 84-196 (227)
218 3giw_A Protein of unknown func 98.9 4.9E-10 1.7E-14 99.6 2.7 98 69-170 77-200 (277)
219 2xyq_A Putative 2'-O-methyl tr 98.9 5E-09 1.7E-13 93.2 9.1 126 70-205 63-210 (290)
220 4hc4_A Protein arginine N-meth 98.9 4.1E-09 1.4E-13 96.9 8.6 107 59-169 70-188 (376)
221 2qm3_A Predicted methyltransfe 98.9 6.8E-09 2.3E-13 93.8 9.8 116 70-189 172-303 (373)
222 4dmg_A Putative uncharacterize 98.9 3.4E-09 1.1E-13 97.6 7.5 118 71-191 215-353 (393)
223 3ajd_A Putative methyltransfer 98.9 5.7E-10 1.9E-14 96.6 2.2 114 68-184 81-229 (274)
224 4azs_A Methyltransferase WBDD; 98.9 5.3E-10 1.8E-14 106.7 2.1 96 70-169 66-172 (569)
225 3a27_A TYW2, uncharacterized p 98.8 3.9E-09 1.3E-13 91.5 6.8 113 70-190 119-246 (272)
226 2f8l_A Hypothetical protein LM 98.8 7.7E-09 2.6E-13 92.1 8.7 137 68-206 128-305 (344)
227 3c0k_A UPF0064 protein YCCW; P 98.8 5.2E-09 1.8E-13 95.2 6.8 118 70-190 220-365 (396)
228 1wxx_A TT1595, hypothetical pr 98.8 4.8E-09 1.7E-13 95.1 5.8 117 70-190 209-351 (382)
229 2yxl_A PH0851 protein, 450AA l 98.8 6.8E-09 2.3E-13 96.3 6.7 121 68-189 257-413 (450)
230 1sqg_A SUN protein, FMU protei 98.8 1.3E-08 4.6E-13 93.6 8.0 116 67-184 243-392 (429)
231 3kr9_A SAM-dependent methyltra 98.8 6E-08 2.1E-12 83.4 11.4 128 71-206 16-158 (225)
232 2as0_A Hypothetical protein PH 98.8 6.3E-09 2.2E-13 94.5 5.4 118 70-191 217-362 (396)
233 2b78_A Hypothetical protein SM 98.7 7.4E-09 2.5E-13 94.4 5.7 117 70-188 212-355 (385)
234 3gnl_A Uncharacterized protein 98.7 7.7E-08 2.6E-12 83.9 11.3 128 71-206 22-164 (244)
235 3lec_A NADB-rossmann superfami 98.7 1.2E-07 4E-12 82.0 12.0 129 71-206 22-164 (230)
236 2frx_A Hypothetical protein YE 98.7 5.6E-09 1.9E-13 98.5 4.0 114 70-184 117-264 (479)
237 3m6w_A RRNA methylase; rRNA me 98.7 9.1E-09 3.1E-13 97.0 5.0 118 67-185 98-248 (464)
238 3lcv_B Sisomicin-gentamicin re 98.7 2.8E-08 9.7E-13 88.4 7.4 141 59-205 122-281 (281)
239 3v97_A Ribosomal RNA large sub 98.7 5.9E-09 2E-13 102.4 3.2 117 70-189 539-676 (703)
240 3tm4_A TRNA (guanine N2-)-meth 98.7 3.5E-08 1.2E-12 89.4 8.0 116 68-190 215-347 (373)
241 1zq9_A Probable dimethyladenos 98.6 1.6E-08 5.4E-13 88.5 4.6 93 69-168 27-145 (285)
242 3frh_A 16S rRNA methylase; met 98.6 1.6E-07 5.6E-12 82.5 9.8 139 59-206 96-252 (253)
243 3evf_A RNA-directed RNA polyme 98.6 5.9E-08 2E-12 86.3 6.0 133 71-205 75-226 (277)
244 3m4x_A NOL1/NOP2/SUN family pr 98.6 3.1E-08 1E-12 93.2 4.3 118 68-188 103-256 (456)
245 2ih2_A Modification methylase 98.5 1.6E-07 5.4E-12 84.5 8.0 112 70-187 39-186 (421)
246 2yx1_A Hypothetical protein MJ 98.5 7.7E-08 2.6E-12 85.9 5.2 106 70-188 195-310 (336)
247 3k6r_A Putative transferase PH 98.4 2.9E-07 1E-11 81.3 7.2 112 71-191 126-253 (278)
248 2jjq_A Uncharacterized RNA met 98.4 8.4E-07 2.9E-11 82.3 10.2 96 70-175 290-392 (425)
249 2h1r_A Dimethyladenosine trans 98.4 2.8E-07 9.7E-12 81.1 6.6 90 69-165 41-154 (299)
250 1yub_A Ermam, rRNA methyltrans 98.4 2.3E-09 8E-14 91.0 -6.7 94 70-170 29-145 (245)
251 1qam_A ERMC' methyltransferase 98.4 3.2E-08 1.1E-12 84.6 -0.6 42 69-113 29-71 (244)
252 1uwv_A 23S rRNA (uracil-5-)-me 98.3 5.9E-06 2E-10 76.2 12.7 129 69-205 285-431 (433)
253 3b5i_A S-adenosyl-L-methionine 98.3 1.5E-06 5.2E-11 79.8 8.5 41 129-169 146-224 (374)
254 2qfm_A Spermine synthase; sper 98.3 3.9E-07 1.3E-11 83.8 3.8 106 69-177 187-321 (364)
255 2okc_A Type I restriction enzy 98.2 2.4E-06 8.3E-11 78.8 8.4 123 67-191 168-335 (445)
256 3gcz_A Polyprotein; flavivirus 98.2 9.4E-07 3.2E-11 78.8 3.7 132 71-205 91-243 (282)
257 4auk_A Ribosomal RNA large sub 98.0 0.0001 3.5E-09 68.0 14.4 128 70-208 211-356 (375)
258 1m6e_X S-adenosyl-L-methionnin 98.0 9E-06 3.1E-10 74.4 7.0 99 70-169 51-208 (359)
259 3eld_A Methyltransferase; flav 98.0 9.7E-06 3.3E-10 72.8 6.7 133 70-205 81-233 (300)
260 2efj_A 3,7-dimethylxanthine me 98.0 1.2E-06 4.3E-11 80.8 0.9 99 71-169 53-224 (384)
261 3ldu_A Putative methylase; str 97.9 8.3E-06 2.8E-10 74.5 5.2 107 67-175 192-349 (385)
262 3bt7_A TRNA (uracil-5-)-methyl 97.9 2.3E-05 7.9E-10 70.6 7.7 123 71-205 214-368 (369)
263 2dul_A N(2),N(2)-dimethylguano 97.8 6.8E-06 2.3E-10 75.2 2.9 93 70-169 47-163 (378)
264 2b9e_A NOL1/NOP2/SUN domain fa 97.7 3.7E-05 1.3E-09 68.4 6.0 114 68-185 100-253 (309)
265 3axs_A Probable N(2),N(2)-dime 97.7 1.9E-05 6.6E-10 72.8 4.3 94 70-170 52-158 (392)
266 4gqb_A Protein arginine N-meth 97.7 4.8E-05 1.6E-09 74.4 7.1 126 40-167 322-464 (637)
267 3k0b_A Predicted N6-adenine-sp 97.7 2.6E-05 9.1E-10 71.5 5.0 107 67-175 198-355 (393)
268 3ldg_A Putative uncharacterize 97.6 6.1E-05 2.1E-09 69.0 5.4 106 67-174 191-347 (384)
269 3gru_A Dimethyladenosine trans 97.5 9.2E-05 3.1E-09 65.7 5.6 69 69-142 49-124 (295)
270 2r6z_A UPF0341 protein in RSP 97.5 3.5E-05 1.2E-09 66.7 2.4 73 69-144 82-173 (258)
271 2ar0_A M.ecoki, type I restric 97.4 0.00012 4.1E-09 69.8 5.5 138 67-206 166-362 (541)
272 3o4f_A Spermidine synthase; am 97.4 0.00011 3.7E-09 65.7 4.8 146 59-206 68-245 (294)
273 3ll7_A Putative methyltransfer 97.4 4.5E-05 1.5E-09 70.9 2.0 130 71-205 94-246 (410)
274 3fut_A Dimethyladenosine trans 97.3 0.00018 6.3E-09 62.9 4.4 65 73-142 49-120 (271)
275 2qy6_A UPF0209 protein YFCK; s 97.2 0.00071 2.4E-08 58.7 7.6 82 120-206 157-247 (257)
276 2oyr_A UPF0341 protein YHIQ; a 97.2 8.4E-05 2.9E-09 64.8 1.6 94 66-164 84-194 (258)
277 3s1s_A Restriction endonucleas 97.2 0.0015 5.2E-08 65.8 10.8 106 70-175 321-470 (878)
278 3ftd_A Dimethyladenosine trans 97.1 0.0018 6E-08 55.6 8.4 43 69-113 30-73 (249)
279 2px2_A Genome polyprotein [con 97.0 0.00059 2E-08 60.3 4.9 125 71-204 74-224 (269)
280 3v97_A Ribosomal RNA large sub 97.0 0.00073 2.5E-08 66.3 6.0 110 67-176 187-353 (703)
281 3khk_A Type I restriction-modi 96.9 0.00093 3.2E-08 63.8 5.5 134 73-206 247-446 (544)
282 3tqs_A Ribosomal RNA small sub 96.9 0.00039 1.3E-08 60.2 2.5 42 69-113 28-70 (255)
283 3ua3_A Protein arginine N-meth 96.9 0.00068 2.3E-08 67.3 4.3 127 40-167 377-531 (745)
284 2wk1_A NOVP; transferase, O-me 96.8 0.0044 1.5E-07 54.7 8.6 69 121-192 197-269 (282)
285 3r24_A NSP16, 2'-O-methyl tran 96.8 0.0016 5.5E-08 59.0 5.7 130 66-205 105-256 (344)
286 3c6k_A Spermine synthase; sper 96.6 0.0055 1.9E-07 56.5 8.2 146 59-207 191-379 (381)
287 3lkd_A Type I restriction-modi 96.6 0.012 4.1E-07 56.2 10.9 117 69-187 220-381 (542)
288 3uzu_A Ribosomal RNA small sub 96.5 0.00054 1.9E-08 60.0 0.9 44 70-113 42-87 (279)
289 3cvo_A Methyltransferase-like 96.5 0.0017 5.8E-08 54.9 3.9 34 131-170 121-154 (202)
290 1m6y_A S-adenosyl-methyltransf 96.4 0.0007 2.4E-08 60.1 0.9 43 70-113 26-69 (301)
291 4fzv_A Putative methyltransfer 96.2 0.0039 1.3E-07 56.8 4.5 104 66-171 144-285 (359)
292 1qyr_A KSGA, high level kasuga 95.9 0.0027 9.1E-08 54.7 1.8 41 70-113 21-62 (252)
293 3lkz_A Non-structural protein 95.5 0.037 1.3E-06 49.9 7.7 96 71-173 95-207 (321)
294 2vz8_A Fatty acid synthase; tr 95.4 0.0078 2.7E-07 66.6 3.9 99 71-172 1241-1350(2512)
295 2zig_A TTHA0409, putative modi 95.3 0.027 9.1E-07 48.9 6.3 70 120-189 27-130 (297)
296 2k4m_A TR8_protein, UPF0146 pr 95.3 0.017 5.9E-07 47.1 4.4 90 46-158 16-111 (153)
297 2zig_A TTHA0409, putative modi 94.6 0.012 4.3E-07 51.0 2.0 42 69-113 234-276 (297)
298 1boo_A Protein (N-4 cytosine-s 94.5 0.05 1.7E-06 48.0 5.9 42 148-189 62-114 (323)
299 3p8z_A Mtase, non-structural p 93.2 0.2 6.7E-06 44.1 6.9 91 71-170 79-186 (267)
300 4dcm_A Ribosomal RNA large sub 92.8 0.41 1.4E-05 43.1 8.7 92 71-172 39-138 (375)
301 1eg2_A Modification methylase 90.3 0.24 8.2E-06 43.9 4.3 41 131-171 57-107 (319)
302 2c7p_A Modification methylase 89.4 5.2 0.00018 35.3 12.3 114 71-190 11-148 (327)
303 3vyw_A MNMC2; tRNA wobble urid 89.3 1.9 6.6E-05 38.4 9.3 82 120-206 173-260 (308)
304 3goh_A Alcohol dehydrogenase, 89.2 0.86 2.9E-05 39.0 6.9 85 70-169 142-228 (315)
305 1wg8_A Predicted S-adenosylmet 88.2 0.26 9E-06 43.7 3.0 42 68-112 20-62 (285)
306 1g60_A Adenine-specific methyl 87.5 1 3.5E-05 38.0 6.2 59 148-206 52-125 (260)
307 3dmg_A Probable ribosomal RNA 87.2 1.8 6.3E-05 39.0 8.0 104 71-187 46-158 (381)
308 1g55_A DNA cytosine methyltran 86.4 3.8 0.00013 36.2 9.5 117 72-190 3-144 (343)
309 1g60_A Adenine-specific methyl 85.3 0.47 1.6E-05 40.1 2.9 42 69-113 211-253 (260)
310 1f8f_A Benzyl alcohol dehydrog 84.9 0.41 1.4E-05 42.2 2.4 91 70-169 190-288 (371)
311 2dph_A Formaldehyde dismutase; 84.5 0.63 2.1E-05 41.5 3.4 96 70-169 185-298 (398)
312 3g7u_A Cytosine-specific methy 82.9 7.4 0.00025 35.0 9.9 113 72-189 3-145 (376)
313 3two_A Mannitol dehydrogenase; 81.6 2.1 7.2E-05 37.1 5.6 87 69-169 175-264 (348)
314 3trk_A Nonstructural polyprote 81.3 3.6 0.00012 36.7 6.9 75 131-205 210-301 (324)
315 1kol_A Formaldehyde dehydrogen 81.2 0.59 2E-05 41.5 1.9 96 70-169 185-299 (398)
316 2km1_A Protein DRE2; yeast, an 80.5 1.5 5.3E-05 34.8 3.9 56 127-185 53-110 (136)
317 3qv2_A 5-cytosine DNA methyltr 80.0 23 0.00079 31.2 11.9 117 71-190 10-155 (327)
318 3gms_A Putative NADPH:quinone 79.8 2.6 9E-05 36.4 5.6 89 70-169 144-242 (340)
319 1pl8_A Human sorbitol dehydrog 79.5 0.97 3.3E-05 39.6 2.7 91 70-169 171-272 (356)
320 1rjd_A PPM1P, carboxy methyl t 78.5 2.4 8.2E-05 37.7 5.0 99 69-170 96-232 (334)
321 1pqw_A Polyketide synthase; ro 78.3 1.3 4.4E-05 35.0 2.9 90 70-171 38-138 (198)
322 4ej6_A Putative zinc-binding d 77.9 1.8 6.2E-05 38.2 4.0 91 70-169 182-283 (370)
323 3tka_A Ribosomal RNA small sub 77.8 1.6 5.3E-05 39.8 3.5 44 66-110 53-98 (347)
324 1v3u_A Leukotriene B4 12- hydr 77.7 0.99 3.4E-05 38.9 2.2 88 70-169 145-243 (333)
325 2uyo_A Hypothetical protein ML 77.1 4.5 0.00015 35.5 6.3 98 70-170 102-218 (310)
326 1piw_A Hypothetical zinc-type 74.7 1.7 5.8E-05 38.0 2.9 89 70-169 179-275 (360)
327 3fpc_A NADP-dependent alcohol 74.1 2.5 8.5E-05 36.7 3.8 90 70-169 166-265 (352)
328 2fzw_A Alcohol dehydrogenase c 73.9 3.6 0.00012 35.9 4.8 91 70-169 190-291 (373)
329 2jhf_A Alcohol dehydrogenase E 72.4 4.3 0.00015 35.5 4.9 91 70-169 191-292 (374)
330 3s2e_A Zinc-containing alcohol 71.9 2.1 7.3E-05 36.9 2.8 91 69-169 165-262 (340)
331 1p0f_A NADP-dependent alcohol 71.7 4.7 0.00016 35.3 5.0 91 70-169 191-292 (373)
332 3ubt_Y Modification methylase 71.6 46 0.0016 28.2 13.4 127 73-205 2-162 (331)
333 1cdo_A Alcohol dehydrogenase; 71.3 3.8 0.00013 35.9 4.3 91 70-169 192-293 (374)
334 1uuf_A YAHK, zinc-type alcohol 70.5 2.9 0.0001 36.9 3.4 87 70-169 194-287 (369)
335 4gua_A Non-structural polyprot 70.5 9.6 0.00033 37.2 7.1 75 131-205 220-311 (670)
336 3ggo_A Prephenate dehydrogenas 70.4 33 0.0011 29.6 10.2 105 70-184 32-144 (314)
337 1e3j_A NADP(H)-dependent ketos 69.0 4 0.00014 35.4 3.9 90 70-169 168-270 (352)
338 2j3h_A NADP-dependent oxidored 68.9 1.9 6.7E-05 37.1 1.9 88 70-169 155-254 (345)
339 1e3i_A Alcohol dehydrogenase, 68.6 4.6 0.00016 35.3 4.3 91 70-169 195-296 (376)
340 2h6e_A ADH-4, D-arabinose 1-de 68.6 2.8 9.6E-05 36.3 2.8 89 70-169 170-268 (344)
341 4b7c_A Probable oxidoreductase 67.6 3.8 0.00013 35.1 3.5 89 70-169 149-247 (336)
342 1i4w_A Mitochondrial replicati 67.1 4.3 0.00015 36.6 3.8 42 45-91 34-79 (353)
343 3tos_A CALS11; methyltransfera 66.6 3.1 0.00011 36.0 2.6 53 130-185 179-237 (257)
344 3pvc_A TRNA 5-methylaminomethy 65.7 10 0.00034 36.3 6.3 55 131-190 170-228 (689)
345 3ps9_A TRNA 5-methylaminomethy 64.5 7.5 0.00026 37.0 5.1 55 131-190 178-236 (676)
346 3nx4_A Putative oxidoreductase 64.2 11 0.00038 31.9 5.8 91 66-169 143-240 (324)
347 3uko_A Alcohol dehydrogenase c 63.4 7 0.00024 34.3 4.4 91 70-169 193-294 (378)
348 3uog_A Alcohol dehydrogenase; 63.1 1.4 4.7E-05 38.8 -0.3 89 70-169 189-286 (363)
349 2hcy_A Alcohol dehydrogenase 1 62.3 5.1 0.00017 34.7 3.2 90 69-169 168-268 (347)
350 1zsy_A Mitochondrial 2-enoyl t 61.7 19 0.00066 31.1 6.9 92 70-169 167-269 (357)
351 1yb5_A Quinone oxidoreductase; 60.2 7.5 0.00026 33.9 4.0 88 70-169 170-268 (351)
352 2b5w_A Glucose dehydrogenase; 59.8 12 0.00039 32.6 5.1 88 72-169 174-272 (357)
353 3ip1_A Alcohol dehydrogenase, 59.8 18 0.00062 32.0 6.5 92 70-169 213-317 (404)
354 4eye_A Probable oxidoreductase 59.6 6.2 0.00021 34.2 3.3 89 70-169 159-256 (342)
355 1tt7_A YHFP; alcohol dehydroge 59.5 15 0.00053 31.2 5.8 86 73-169 153-246 (330)
356 4dvj_A Putative zinc-dependent 59.1 11 0.00039 32.9 5.0 90 70-169 171-269 (363)
357 2d8a_A PH0655, probable L-thre 58.0 9.2 0.00031 33.0 4.1 90 70-169 167-266 (348)
358 1xa0_A Putative NADPH dependen 56.9 13 0.00046 31.6 5.0 86 73-169 152-245 (328)
359 4a0s_A Octenoyl-COA reductase/ 56.2 20 0.00067 32.1 6.1 90 70-169 220-335 (447)
360 1rjw_A ADH-HT, alcohol dehydro 55.7 5.8 0.0002 34.2 2.4 89 70-169 164-260 (339)
361 1iz0_A Quinone oxidoreductase; 55.1 8.4 0.00029 32.5 3.3 84 70-169 125-217 (302)
362 3qwb_A Probable quinone oxidor 54.3 7 0.00024 33.5 2.7 90 69-169 147-246 (334)
363 3gqv_A Enoyl reductase; medium 53.0 31 0.0011 30.1 6.8 91 69-169 163-262 (371)
364 3jyn_A Quinone oxidoreductase; 51.4 7 0.00024 33.4 2.2 89 70-169 140-238 (325)
365 3krt_A Crotonyl COA reductase; 51.2 19 0.00064 32.5 5.2 90 70-169 228-343 (456)
366 3tqh_A Quinone oxidoreductase; 50.7 10 0.00034 32.4 3.1 90 70-170 152-245 (321)
367 3m6i_A L-arabinitol 4-dehydrog 50.5 7.4 0.00025 33.8 2.3 91 70-169 179-282 (363)
368 3ufb_A Type I restriction-modi 49.2 6.3 0.00021 37.1 1.7 119 67-187 214-385 (530)
369 2eih_A Alcohol dehydrogenase; 49.0 7.4 0.00025 33.6 2.0 88 70-169 166-264 (343)
370 2c0c_A Zinc binding alcohol de 48.7 13 0.00044 32.5 3.6 90 70-170 163-261 (362)
371 3jv7_A ADH-A; dehydrogenase, n 47.9 4.4 0.00015 34.9 0.4 90 70-169 171-269 (345)
372 2hwk_A Helicase NSP2; rossman 47.8 21 0.00072 32.0 4.7 75 131-205 205-296 (320)
373 2cdc_A Glucose dehydrogenase g 47.4 14 0.00047 32.2 3.5 86 71-169 181-277 (366)
374 3fbg_A Putative arginate lyase 46.8 12 0.00041 32.3 3.0 90 70-169 150-247 (346)
375 1jvb_A NAD(H)-dependent alcoho 46.5 11 0.00037 32.6 2.7 89 70-169 170-270 (347)
376 2g5c_A Prephenate dehydrogenas 45.9 99 0.0034 25.3 8.6 102 73-184 3-112 (281)
377 4h0n_A DNMT2; SAH binding, tra 45.3 13 0.00045 32.9 3.1 116 72-190 4-144 (333)
378 2vn8_A Reticulon-4-interacting 44.6 23 0.00079 30.8 4.6 92 69-170 182-280 (375)
379 2py6_A Methyltransferase FKBM; 41.9 22 0.00074 32.1 4.0 21 69-89 225-245 (409)
380 1gu7_A Enoyl-[acyl-carrier-pro 41.6 24 0.00083 30.4 4.2 90 70-169 166-274 (364)
381 2f1k_A Prephenate dehydrogenas 41.3 85 0.0029 25.6 7.4 83 73-168 2-89 (279)
382 1qor_A Quinone oxidoreductase; 40.7 13 0.00044 31.6 2.2 89 70-169 140-238 (327)
383 2zb4_A Prostaglandin reductase 39.7 12 0.00041 32.3 1.9 86 72-169 162-259 (357)
384 1zkd_A DUF185; NESG, RPR58, st 38.4 24 0.00082 32.2 3.8 93 50-142 59-159 (387)
385 4eez_A Alcohol dehydrogenase 1 38.2 26 0.0009 29.8 3.8 90 70-169 163-262 (348)
386 3gaz_A Alcohol dehydrogenase s 37.5 16 0.00055 31.5 2.3 89 70-169 150-245 (343)
387 2j8z_A Quinone oxidoreductase; 37.5 16 0.00053 31.7 2.3 89 70-169 162-260 (354)
388 4a2c_A Galactitol-1-phosphate 36.5 40 0.0014 28.6 4.7 92 69-169 159-259 (346)
389 1boo_A Protein (N-4 cytosine-s 35.4 23 0.00079 30.7 3.1 42 69-113 251-293 (323)
390 1zcj_A Peroxisomal bifunctiona 34.2 1E+02 0.0035 28.0 7.4 103 70-180 36-160 (463)
391 4e12_A Diketoreductase; oxidor 31.6 1.1E+02 0.0039 25.4 6.7 88 71-167 4-118 (283)
392 1wg8_A Predicted S-adenosylmet 31.4 45 0.0015 29.3 4.2 37 148-184 211-248 (285)
393 1m6y_A S-adenosyl-methyltransf 31.3 47 0.0016 28.8 4.3 37 148-184 223-260 (301)
394 2oo3_A Protein involved in cat 30.5 50 0.0017 28.9 4.3 94 71-169 92-197 (283)
395 1wly_A CAAR, 2-haloacrylate re 30.4 20 0.00067 30.6 1.7 89 70-169 145-243 (333)
396 3iht_A S-adenosyl-L-methionine 30.1 16 0.00053 30.1 0.9 100 71-172 41-149 (174)
397 3hz7_A Uncharacterized protein 29.1 1.5E+02 0.0052 20.8 7.6 49 158-206 23-73 (87)
398 2pjd_A Ribosomal RNA small sub 28.9 89 0.003 26.8 5.7 103 71-184 20-127 (343)
399 3tka_A Ribosomal RNA small sub 28.5 53 0.0018 29.7 4.2 40 148-187 252-292 (347)
400 4dup_A Quinone oxidoreductase; 28.4 21 0.00071 30.9 1.5 89 70-169 167-264 (353)
401 1np3_A Ketol-acid reductoisome 28.0 31 0.0011 30.0 2.6 83 72-168 17-105 (338)
402 1qz7_B Axin; beta-catenin, pro 26.5 42 0.0014 23.6 2.5 37 126-162 10-49 (70)
403 3lvj_C Sulfurtransferase TUSA; 25.8 1.6E+02 0.0056 20.2 8.3 57 149-205 23-80 (82)
404 2h78_A Hibadh, 3-hydroxyisobut 25.8 2E+02 0.0067 23.8 7.2 101 71-184 3-113 (302)
405 4f3n_A Uncharacterized ACR, CO 24.7 35 0.0012 31.7 2.4 20 71-90 138-157 (432)
406 3kkj_A Amine oxidase, flavin-c 24.2 55 0.0019 24.3 3.1 23 73-95 4-28 (336)
407 3k6j_A Protein F01G10.3, confi 23.7 1.8E+02 0.006 26.9 7.0 93 69-168 52-164 (460)
408 3i83_A 2-dehydropantoate 2-red 21.9 2.5E+02 0.0085 23.6 7.2 102 72-182 3-118 (320)
No 1
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.70 E-value=1e-16 Score=131.68 Aligned_cols=141 Identities=18% Similarity=0.236 Sum_probs=103.5
Q ss_pred hhhccc-CCCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCc--cce-eccccccCCCCCCccC
Q 027609 60 YLNGMG-INWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGL--FGL-YHDWCESFNTYPRTYD 134 (221)
Q Consensus 60 Y~~~L~-i~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl--~~~-~~d~~e~f~~yp~sFD 134 (221)
|..++. +......+|||+|||+|.++..|++++. +++++|.+ .+++.+.++.- +.. ..|.. .+ +++++||
T Consensus 34 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~-~~-~~~~~fD 108 (220)
T 3hnr_A 34 YEDILEDVVNKSFGNVLEFGVGTGNLTNKLLLAGR---TVYGIEPSREMRMIAKEKLPKEFSITEGDFL-SF-EVPTSID 108 (220)
T ss_dssp HHHHHHHHHHTCCSEEEEECCTTSHHHHHHHHTTC---EEEEECSCHHHHHHHHHHSCTTCCEESCCSS-SC-CCCSCCS
T ss_pred HHHHHHHhhccCCCeEEEeCCCCCHHHHHHHhCCC---eEEEEeCCHHHHHHHHHhCCCceEEEeCChh-hc-CCCCCeE
Confidence 344443 3333578999999999999999999864 57899986 58998888732 222 23432 23 2448999
Q ss_pred eeeeccccccccccHHH--HHHHhhhhccCCeEEEEEcCh----h---------------------------hHHHHHHH
Q 027609 135 LLHADHLFSTIKKSLKA--VVAEVDRILRPDGNLILRDDA----E---------------------------TIVEVEDL 181 (221)
Q Consensus 135 lVh~~~v~~h~~~d~~~--vL~EmdRVLRPGG~~ii~d~~----~---------------------------~~~~i~~i 181 (221)
+|.|..+++|+. ++.. +|.|+.|+|||||.+++.+.. . ..+.++++
T Consensus 109 ~v~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (220)
T 3hnr_A 109 TIVSTYAFHHLT-DDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTI 187 (220)
T ss_dssp EEEEESCGGGSC-HHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHH
T ss_pred EEEECcchhcCC-hHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHH
Confidence 999999999998 6766 999999999999999999632 0 13677888
Q ss_pred HHhcCCeEEEeecCCCeeEEEEEec
Q 027609 182 VKSLHWDVRMIYTNDNQGMLCVHKT 206 (221)
Q Consensus 182 ~~~l~W~~~~~~~~~~e~~l~~~K~ 206 (221)
++.-.+++......+-.=++.++|+
T Consensus 188 l~~aGf~v~~~~~~~~~w~~~~~~~ 212 (220)
T 3hnr_A 188 FENNGFHVTFTRLNHFVWVMEATKQ 212 (220)
T ss_dssp HHHTTEEEEEEECSSSEEEEEEEEC
T ss_pred HHHCCCEEEEeeccceEEEEeehhh
Confidence 8888998766555555556666664
No 2
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.64 E-value=5.5e-16 Score=127.91 Aligned_cols=96 Identities=19% Similarity=0.312 Sum_probs=77.6
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCc--ccee-ccccccCCCCCCccCeeeeccccccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGL--FGLY-HDWCESFNTYPRTYDLLHADHLFSTI 145 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl--~~~~-~d~~e~f~~yp~sFDlVh~~~v~~h~ 145 (221)
...+|||+|||+|.++..|++++. +++++|.+ .+++.+.++.- +..+ .|. +.+ +.+++||+|+|..+++|+
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~-~~~-~~~~~fD~v~~~~~l~~~ 116 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKDGITYIHSRF-EDA-QLPRRYDNIVLTHVLEHI 116 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSCSCEEEEESCG-GGC-CCSSCEEEEEEESCGGGC
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhhCCeEEEEccH-HHc-CcCCcccEEEEhhHHHhh
Confidence 356799999999999999998864 46888886 59999988732 1222 343 223 224999999999999999
Q ss_pred cccHHHHHHHhh-hhccCCeEEEEEcC
Q 027609 146 KKSLKAVVAEVD-RILRPDGNLILRDD 171 (221)
Q Consensus 146 ~~d~~~vL~Emd-RVLRPGG~~ii~d~ 171 (221)
. |+..+|.|+. |+|||||++++.+.
T Consensus 117 ~-~~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 117 D-DPVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp S-SHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred c-CHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 8 8999999999 99999999999874
No 3
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.64 E-value=1e-15 Score=124.23 Aligned_cols=129 Identities=15% Similarity=0.184 Sum_probs=96.6
Q ss_pred eEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Ccc---c-eeccccccCCCCC-CccCeeeecccc
Q 027609 73 NVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLF---G-LYHDWCESFNTYP-RTYDLLHADHLF 142 (221)
Q Consensus 73 ~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~---~-~~~d~~e~f~~yp-~sFDlVh~~~v~ 142 (221)
+|||+|||+|.++..|++++ ..+++++|.+ .+++.+.++ |+. . ...|. +.+ +++ ++||+|.|..++
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~-~~~~~~~D~v~~~~~l 121 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQS--DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDV-HNI-PIEDNYADLIVSRGSV 121 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHS--EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBT-TBC-SSCTTCEEEEEEESCG
T ss_pred EEEEECCCCCHHHHHHHHcC--CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCH-HHC-CCCcccccEEEECchH
Confidence 99999999999999999872 2367899986 588877776 432 2 22343 223 366 999999999999
Q ss_pred ccccccHHHHHHHhhhhccCCeEEEEEcCh------------------------------hhHHHHHHHHHhcCCeEEEe
Q 027609 143 STIKKSLKAVVAEVDRILRPDGNLILRDDA------------------------------ETIVEVEDLVKSLHWDVRMI 192 (221)
Q Consensus 143 ~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~------------------------------~~~~~i~~i~~~l~W~~~~~ 192 (221)
+|+. ++..+|.|+.|+|||||.+++.+.. ...+.+.++++.-.++....
T Consensus 122 ~~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 200 (219)
T 3dlc_A 122 FFWE-DVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEI 200 (219)
T ss_dssp GGCS-CHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEE
T ss_pred hhcc-CHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEEE
Confidence 9997 8999999999999999999998521 11367788888888876544
Q ss_pred ecCCCeeEEEEEec
Q 027609 193 YTNDNQGMLCVHKT 206 (221)
Q Consensus 193 ~~~~~e~~l~~~K~ 206 (221)
...+....+++.|+
T Consensus 201 ~~~~~~~~~~~~k~ 214 (219)
T 3dlc_A 201 ILGDEGFWIIISKT 214 (219)
T ss_dssp EEETTEEEEEEBCC
T ss_pred EecCCceEEEEecc
Confidence 44444556666653
No 4
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.63 E-value=1.2e-16 Score=139.00 Aligned_cols=94 Identities=15% Similarity=0.123 Sum_probs=74.2
Q ss_pred CCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCccceeccccccCCCCC-CccCeeeecccccccccc
Q 027609 71 VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLFGLYHDWCESFNTYP-RTYDLLHADHLFSTIKKS 148 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~d~~e~f~~yp-~sFDlVh~~~v~~h~~~d 148 (221)
..+|||+|||+|.++..|++++. +|+++|.+ .|++.+.++.-+...+.-+|.+ ++| ++||+|.|.+++| |. +
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~~~---~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~-~~~~~sfD~v~~~~~~h-~~-~ 113 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEFFE---RVHAVDPGEAQIRQALRHPRVTYAVAPAEDT-GLPPASVDVAIAAQAMH-WF-D 113 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTTCS---EEEEEESCHHHHHTCCCCTTEEEEECCTTCC-CCCSSCEEEEEECSCCT-TC-C
T ss_pred CCCEEEEcCCCCHHHHHHHHhCC---EEEEEeCcHHhhhhhhhcCCceeehhhhhhh-cccCCcccEEEEeeehh-Hh-h
Confidence 46899999999999999999874 46888887 5888776553333333224444 477 9999999999995 55 6
Q ss_pred HHHHHHHhhhhccCCeEEEEEc
Q 027609 149 LKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 149 ~~~vL~EmdRVLRPGG~~ii~d 170 (221)
+..++.|+.|||||||.|++.+
T Consensus 114 ~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 114 LDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEEE
Confidence 8899999999999999998864
No 5
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.63 E-value=6.6e-16 Score=126.77 Aligned_cols=135 Identities=16% Similarity=0.134 Sum_probs=101.8
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc---eeccccccCCCCC-CccCeeeec
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG---LYHDWCESFNTYP-RTYDLLHAD 139 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~---~~~d~~e~f~~yp-~sFDlVh~~ 139 (221)
....+|||+|||+|.++..|+++.....+++++|.+ .+++.+.++ |+.. ...|. +.+ +++ ++||+|.|.
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~-~~~~~~fD~v~~~ 113 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEE-NKI-PLPDNTVDFIFMA 113 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBT-TBC-SSCSSCEEEEEEE
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeccc-ccC-CCCCCCeeEEEee
Confidence 346799999999999999998874111257888886 588877666 3322 22343 223 366 899999999
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEEcCh-------------hhHHHHHHHHHhcCCeEEEe-ecCCCeeEEEEEe
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA-------------ETIVEVEDLVKSLHWDVRMI-YTNDNQGMLCVHK 205 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~-------------~~~~~i~~i~~~l~W~~~~~-~~~~~e~~l~~~K 205 (221)
.+++|+. ++..+|.|+.|+|||||++++.+.. ...+.+.++++...++.... +......+++++|
T Consensus 114 ~~l~~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k 192 (219)
T 3dh0_A 114 FTFHELS-EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVGKYCFGVYAMI 192 (219)
T ss_dssp SCGGGCS-SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEETTTEEEEEEEC
T ss_pred hhhhhcC-CHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeCCceEEEEEEe
Confidence 9999998 8999999999999999999998632 12688999999999996543 3445677888888
Q ss_pred c
Q 027609 206 T 206 (221)
Q Consensus 206 ~ 206 (221)
+
T Consensus 193 ~ 193 (219)
T 3dh0_A 193 V 193 (219)
T ss_dssp C
T ss_pred c
Confidence 5
No 6
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.62 E-value=2.1e-15 Score=122.99 Aligned_cols=132 Identities=13% Similarity=0.196 Sum_probs=99.6
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCccceec-cccccC---CCCC-CccCeeeecccc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLFGLYH-DWCESF---NTYP-RTYDLLHADHLF 142 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~-d~~e~f---~~yp-~sFDlVh~~~v~ 142 (221)
....+|||+|||+|.++..|++++. +++++|.+ .+++.+.+++...... |. +.+ +..+ .+||+|.|..++
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~fD~v~~~~~l 126 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGI---EAVGVDGDRTLVDAARAAGAGEVHLASY-AQLAEAKVPVGKDYDLICANFAL 126 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHTCSSCEEECCH-HHHHTTCSCCCCCEEEEEEESCC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCC---EEEEEcCCHHHHHHHHHhcccccchhhH-HhhcccccccCCCccEEEECchh
Confidence 3458999999999999999999865 56888986 5999999986544332 22 122 2234 669999999999
Q ss_pred ccccccHHHHHHHhhhhccCCeEEEEEcChh--------------------------------hHHHHHHHHHhcCCeEE
Q 027609 143 STIKKSLKAVVAEVDRILRPDGNLILRDDAE--------------------------------TIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 143 ~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~--------------------------------~~~~i~~i~~~l~W~~~ 190 (221)
+ .. ++..+|.|+.|+|||||++++.+.++ ..+.+.+++..-.+++.
T Consensus 127 ~-~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 204 (227)
T 3e8s_A 127 L-HQ-DIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLV 204 (227)
T ss_dssp C-SS-CCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEE
T ss_pred h-hh-hHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEE
Confidence 8 45 89999999999999999999986421 36888999999999886
Q ss_pred Eeec---C----CCeeEEEEEec
Q 027609 191 MIYT---N----DNQGMLCVHKT 206 (221)
Q Consensus 191 ~~~~---~----~~e~~l~~~K~ 206 (221)
.... . ...-+++++|+
T Consensus 205 ~~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 205 SLQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp EEECCCCTTCSSCSCEEEEEEEC
T ss_pred EEecCCCCCCCCceeEEEEeecC
Confidence 4321 1 12557777773
No 7
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.61 E-value=5.8e-16 Score=131.04 Aligned_cols=97 Identities=21% Similarity=0.269 Sum_probs=78.7
Q ss_pred CCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc---eeccccccCCCCC-CccCeeee
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG---LYHDWCESFNTYP-RTYDLLHA 138 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~---~~~d~~e~f~~yp-~sFDlVh~ 138 (221)
.....+|||+|||+|.++..|++++. +++++|.+ .|++.+.++ |+.+ ...|. +.+ +|+ ++||+|+|
T Consensus 35 ~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~-~~l-~~~~~~fD~V~~ 109 (260)
T 1vl5_A 35 LKGNEEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA-EQM-PFTDERFHIVTC 109 (260)
T ss_dssp CCSCCEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CC-CSCTTCEEEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH-HhC-CCCCCCEEEEEE
Confidence 33578999999999999999998864 67899986 588887765 4332 23343 333 476 99999999
Q ss_pred ccccccccccHHHHHHHhhhhccCCeEEEEEc
Q 027609 139 DHLFSTIKKSLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 139 ~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
..+++|+. |+..+|.|+.|+|||||++++.+
T Consensus 110 ~~~l~~~~-d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 110 RIAAHHFP-NPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp ESCGGGCS-CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhHhcC-CHHHHHHHHHHHcCCCCEEEEEE
Confidence 99999999 89999999999999999999974
No 8
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.61 E-value=2.7e-15 Score=122.26 Aligned_cols=95 Identities=18% Similarity=0.302 Sum_probs=77.7
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCccce---eccccccCCCCC-CccCeeeecccccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLFGL---YHDWCESFNTYP-RTYDLLHADHLFST 144 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~~~---~~d~~e~f~~yp-~sFDlVh~~~v~~h 144 (221)
...+|||+|||+|.++..|++++. +++++|.+ .+++.+.++|+..+ ..|..+ + ++ ++||+|.|+.+++|
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~-~--~~~~~~D~v~~~~~l~~ 119 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGLAD---RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFD-W--TPDRQWDAVFFAHWLAH 119 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHGGGCCTTEEEEECCTTS-C--CCSSCEEEEEEESCGGG
T ss_pred CCCeEEEECCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHhcCCCCeEEEeccccc-C--CCCCceeEEEEechhhc
Confidence 356999999999999999998864 56888886 59999988775432 234322 2 55 99999999999999
Q ss_pred ccccH--HHHHHHhhhhccCCeEEEEEcC
Q 027609 145 IKKSL--KAVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 145 ~~~d~--~~vL~EmdRVLRPGG~~ii~d~ 171 (221)
+. ++ ..+|.|+.|+|||||.+++.+.
T Consensus 120 ~~-~~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 120 VP-DDRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp SC-HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CC-HHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 98 54 8999999999999999999964
No 9
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.61 E-value=2.2e-15 Score=119.31 Aligned_cols=135 Identities=16% Similarity=0.193 Sum_probs=101.0
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCccceeccccccCCCCC-CccCeeeecccccccc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLFGLYHDWCESFNTYP-RTYDLLHADHLFSTIK 146 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~d~~e~f~~yp-~sFDlVh~~~v~~h~~ 146 (221)
....+|||+|||+|.++..|++++ . +++++|.+ .+++.+.++ ...+..- +.. .+++ ++||+|.|..+++|+.
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~--~-~v~~vD~s~~~~~~a~~~-~~~v~~~-~~d-~~~~~~~~D~v~~~~~l~~~~ 89 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA--T-KLYCIDINVIALKEVKEK-FDSVITL-SDP-KEIPDNSVDFILFANSFHDMD 89 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE--E-EEEEECSCHHHHHHHHHH-CTTSEEE-SSG-GGSCTTCEEEEEEESCSTTCS
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc--C-eEEEEeCCHHHHHHHHHh-CCCcEEE-eCC-CCCCCCceEEEEEccchhccc
Confidence 347899999999999999999986 2 78999986 589988887 3221111 111 3566 8999999999999998
Q ss_pred ccHHHHHHHhhhhccCCeEEEEEcChh-------------hHHHHHHHHHhcCCeEEEee-cCCCeeEEEEEecccCCCc
Q 027609 147 KSLKAVVAEVDRILRPDGNLILRDDAE-------------TIVEVEDLVKSLHWDVRMIY-TNDNQGMLCVHKTYWRPKE 212 (221)
Q Consensus 147 ~d~~~vL~EmdRVLRPGG~~ii~d~~~-------------~~~~i~~i~~~l~W~~~~~~-~~~~e~~l~~~K~~w~~~~ 212 (221)
++..+|.|+.|+|||||++++.+... ..+++++++. .|+..... .....-.+++.|+-=++.+
T Consensus 90 -~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~~~~~~~l~~~~~~~~~~~ 166 (170)
T 3i9f_A 90 -DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNPTPYHFGLVLKRKTSEGHH 166 (170)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECSSTTEEEEEEEECCCCSCC
T ss_pred -CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCCCCceEEEEEecCCCCccc
Confidence 89999999999999999999995321 1467777777 88765433 3345677888776444433
No 10
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.61 E-value=6.4e-16 Score=134.42 Aligned_cols=102 Identities=10% Similarity=0.109 Sum_probs=77.0
Q ss_pred CCCeEEeecCcchHHHHHHhhCC-CeEEEeccCCCC-CCHHHHHHc----CccceeccccccCCCCC-CccCeeeecccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLK-VWVMNVVPIESP-DTLPIIYER----GLFGLYHDWCESFNTYP-RTYDLLHADHLF 142 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~-v~vmnv~~~d~~-~~l~~a~eR----Gl~~~~~d~~e~f~~yp-~sFDlVh~~~v~ 142 (221)
...+|||+|||+|.++..|+++- ....+|+++|.+ .|++.|+++ |+...+.=.+..+..+| ..||+|.|..++
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~~l 149 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFTL 149 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEESCG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeeeee
Confidence 36789999999999999998762 122357999987 599998876 33221111122344566 789999999999
Q ss_pred ccccc-cHHHHHHHhhhhccCCeEEEEEcC
Q 027609 143 STIKK-SLKAVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 143 ~h~~~-d~~~vL~EmdRVLRPGG~~ii~d~ 171 (221)
+|++. +...+|.|+.|+|||||.|+++|.
T Consensus 150 ~~~~~~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 150 QFLEPSERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence 98874 556899999999999999999864
No 11
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.60 E-value=3.4e-16 Score=142.07 Aligned_cols=144 Identities=11% Similarity=0.127 Sum_probs=109.4
Q ss_pred cchhhhhhhHHHHHhhhhhccc-CCCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCccceec-
Q 027609 44 DFTADYQHWKNVVSKSYLNGMG-INWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLFGLYH- 120 (221)
Q Consensus 44 ~f~~d~~~W~~~v~~~Y~~~L~-i~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~- 120 (221)
.+...+..|..+.......++. +......+|||+|||+|.++..|++++. +++++|.+ ++++.+.++|+.....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~~~~~~~~ 156 (416)
T 4e2x_A 80 YHSSGSSVMREHFAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKGIRVRTDF 156 (416)
T ss_dssp CCGGGCHHHHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTTCCEECSC
T ss_pred CcCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHcCCCcceee
Confidence 3445666788877663333333 4444578999999999999999999875 57899987 5999999997644321
Q ss_pred ---cccccCCCCC-CccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEEcChh--------------------hHH
Q 027609 121 ---DWCESFNTYP-RTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDAE--------------------TIV 176 (221)
Q Consensus 121 ---d~~e~f~~yp-~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~--------------------~~~ 176 (221)
+..+.+ +++ ++||+|+|..+|+|++ |+..+|.|+.|+|||||++++.+... ..+
T Consensus 157 ~~~~~~~~l-~~~~~~fD~I~~~~vl~h~~-d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 234 (416)
T 4e2x_A 157 FEKATADDV-RRTEGPANVIYAANTLCHIP-YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSAT 234 (416)
T ss_dssp CSHHHHHHH-HHHHCCEEEEEEESCGGGCT-THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHH
T ss_pred echhhHhhc-ccCCCCEEEEEECChHHhcC-CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHH
Confidence 112222 355 9999999999999999 89999999999999999999985420 146
Q ss_pred HHHHHHHhcCCeEEEe
Q 027609 177 EVEDLVKSLHWDVRMI 192 (221)
Q Consensus 177 ~i~~i~~~l~W~~~~~ 192 (221)
.++.++.+-.+++...
T Consensus 235 ~l~~ll~~aGf~~~~~ 250 (416)
T 4e2x_A 235 SVQGMAQRCGFELVDV 250 (416)
T ss_dssp HHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHcCCEEEEE
Confidence 7888999989887543
No 12
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.60 E-value=3.4e-15 Score=125.56 Aligned_cols=102 Identities=14% Similarity=0.153 Sum_probs=82.1
Q ss_pred CCCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCc---cc-eeccccccCCCCC-CccCeeeec
Q 027609 66 INWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGL---FG-LYHDWCESFNTYP-RTYDLLHAD 139 (221)
Q Consensus 66 i~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl---~~-~~~d~~e~f~~yp-~sFDlVh~~ 139 (221)
+......+|||+|||+|.++..|++++.. +++++|.+ .+++.+.++.- +. ...|. +.+ +++ ++||+|.|.
T Consensus 40 ~~~~~~~~vLD~GcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~-~~~-~~~~~~fD~v~~~ 115 (253)
T 3g5l_A 40 LPDFNQKTVLDLGCGFGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQKAI-EDI-AIEPDAYNVVLSS 115 (253)
T ss_dssp CCCCTTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCCTTEEEEECCG-GGC-CCCTTCEEEEEEE
T ss_pred hhccCCCEEEEECCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhccCCeEEEEcch-hhC-CCCCCCeEEEEEc
Confidence 34446789999999999999999998753 57899986 59999988742 11 23343 334 365 999999999
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEEcCh
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
.+++|+. ++..+|.|+.|+|||||.+++....
T Consensus 116 ~~l~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 116 LALHYIA-SFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp SCGGGCS-CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhhhhhh-hHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 9999997 8999999999999999999998543
No 13
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.60 E-value=2.7e-15 Score=122.59 Aligned_cols=100 Identities=17% Similarity=0.170 Sum_probs=80.5
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCccceeccccccCCCCC-CccCeeeecccccccc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLFGLYHDWCESFNTYP-RTYDLLHADHLFSTIK 146 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~d~~e~f~~yp-~sFDlVh~~~v~~h~~ 146 (221)
....+|||+|||+|.++..|++++ .+++++|.+ .+++.+.++...-...|..+...+++ ++||+|.|..+++|+.
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~ 107 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENG---TRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLF 107 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTT---CEEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEESCGGGSS
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEECChhhhcC
Confidence 457899999999999999999986 267888886 58888887743212334332224566 8999999999999998
Q ss_pred ccHHHHHHHhhhhccCCeEEEEEcCh
Q 027609 147 KSLKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 147 ~d~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
++..+|.++.|+|||||++++.+..
T Consensus 108 -~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 108 -DPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp -CHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred -CHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 8999999999999999999998643
No 14
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.60 E-value=1.3e-15 Score=132.13 Aligned_cols=100 Identities=12% Similarity=0.247 Sum_probs=73.2
Q ss_pred CCCCeEEeecCcchHHHHH----HhhC--CCeEEEeccCCCC-CCHHHHHHc-----Cccceeccc----cccCC-----
Q 027609 69 SFVRNVMDMRAVYGGFAAA----LKDL--KVWVMNVVPIESP-DTLPIIYER-----GLFGLYHDW----CESFN----- 127 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~----L~~~--~v~vmnv~~~d~~-~~l~~a~eR-----Gl~~~~~d~----~e~f~----- 127 (221)
....+|||+|||+|.++.. +..+ ++. +.++++|.+ +|++.+.++ |+..+...+ .+.++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~-v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVC-INNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCE-EEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCce-eeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcc
Confidence 3467899999999986643 3332 232 245899987 599988876 332221111 12232
Q ss_pred CCC-CccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEEc
Q 027609 128 TYP-RTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 128 ~yp-~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
+|+ ++||+|+|+.+++|+. |+..+|.||.|+|||||++++..
T Consensus 130 ~~~~~~fD~V~~~~~l~~~~-d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 130 KKELQKWDFIHMIQMLYYVK-DIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp TTCCCCEEEEEEESCGGGCS-CHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccCCCceeEEEEeeeeeecC-CHHHHHHHHHHHcCCCcEEEEEE
Confidence 255 9999999999999999 89999999999999999999874
No 15
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.59 E-value=1.2e-14 Score=119.68 Aligned_cols=134 Identities=13% Similarity=0.165 Sum_probs=97.8
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC----c-------cc-eeccccccCCCCC-CccC
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG----L-------FG-LYHDWCESFNTYP-RTYD 134 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG----l-------~~-~~~d~~e~f~~yp-~sFD 134 (221)
....+|||+|||+|.++..|++++.. .+++++|.+ .+++.+.++- + +. ...|. + ..+++ ++||
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~-~~~~~~~~fD 104 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSF-EQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSL-V-YRDKRFSGYD 104 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTC-CEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCS-S-SCCGGGTTCS
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCC-CEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcc-c-ccccccCCCC
Confidence 34679999999999999999987521 267899986 5888887761 1 11 22343 2 23344 8999
Q ss_pred eeeeccccccccccH--HHHHHHhhhhccCCeEEEEEcChhh----------------------HHHHH----HHHHhcC
Q 027609 135 LLHADHLFSTIKKSL--KAVVAEVDRILRPDGNLILRDDAET----------------------IVEVE----DLVKSLH 186 (221)
Q Consensus 135 lVh~~~v~~h~~~d~--~~vL~EmdRVLRPGG~~ii~d~~~~----------------------~~~i~----~i~~~l~ 186 (221)
+|.|..+++|+. ++ ..+|.|+.|+|||||+++.....+. .++++ +++..-.
T Consensus 105 ~V~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~G 183 (219)
T 3jwg_A 105 AATVIEVIEHLD-ENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYG 183 (219)
T ss_dssp EEEEESCGGGCC-HHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHT
T ss_pred EEEEHHHHHhCC-HHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCC
Confidence 999999999998 45 7999999999999998877644321 23344 7788888
Q ss_pred CeEEEee-------cCCCeeEEEEEec
Q 027609 187 WDVRMIY-------TNDNQGMLCVHKT 206 (221)
Q Consensus 187 W~~~~~~-------~~~~e~~l~~~K~ 206 (221)
+++.... .....++.||+|+
T Consensus 184 f~v~~~~~g~~~~~~g~~~qi~~~~~~ 210 (219)
T 3jwg_A 184 YSVRFLQIGEIDDEFGSPTQMGVFTLG 210 (219)
T ss_dssp EEEEEEEESCCCTTSCCSEEEEEEEEC
T ss_pred cEEEEEecCCccccCCCCeEEEEEecc
Confidence 8876542 1236889999985
No 16
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.59 E-value=2.7e-15 Score=128.68 Aligned_cols=97 Identities=15% Similarity=0.237 Sum_probs=76.8
Q ss_pred CCCCCeEEeecCcchHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHc----Cccc---e-eccccccCCCCCCccCeee
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKD-LKVWVMNVVPIESP-DTLPIIYER----GLFG---L-YHDWCESFNTYPRTYDLLH 137 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~---~-~~d~~e~f~~yp~sFDlVh 137 (221)
.....+|||+|||+|.++..|++ .+. +++++|.+ ++++.+.++ |+.. . ..|. ..+|++||+|+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~----~~~~~~fD~v~ 134 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDV---NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGW----EQFDEPVDRIV 134 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCG----GGCCCCCSEEE
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECCh----hhCCCCeeEEE
Confidence 34577999999999999999984 454 57888886 588888776 4322 2 2332 23569999999
Q ss_pred eccccccccc-cHHHHHHHhhhhccCCeEEEEEcC
Q 027609 138 ADHLFSTIKK-SLKAVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 138 ~~~v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~d~ 171 (221)
|..+|+|+.. ++..+|.|+.|+|||||.+++.+.
T Consensus 135 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 135 SIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp EESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred EeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 9999999953 899999999999999999999863
No 17
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.59 E-value=6.8e-15 Score=119.62 Aligned_cols=130 Identities=10% Similarity=0.093 Sum_probs=99.5
Q ss_pred CCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCc-cc-eeccccccCCCCC-CccCeeeecccccccc
Q 027609 71 VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGL-FG-LYHDWCESFNTYP-RTYDLLHADHLFSTIK 146 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl-~~-~~~d~~e~f~~yp-~sFDlVh~~~v~~h~~ 146 (221)
..+|||+|||+|.++..|++++. +++++|.+ .+++.+.++.- +. ...|. +.+ +++ ++||+|.|..+++|+.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~-~~~-~~~~~~fD~v~~~~~l~~~~ 116 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH---QIEGLEPATRLVELARQTHPSVTFHHGTI-TDL-SDSPKRWAGLLAWYSLIHMG 116 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC---CEEEECCCHHHHHHHHHHCTTSEEECCCG-GGG-GGSCCCEEEEEEESSSTTCC
T ss_pred CCeEEEecCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCCCeEEeCcc-ccc-ccCCCCeEEEEehhhHhcCC
Confidence 67899999999999999999865 46888886 59999988732 11 22343 223 355 9999999999999987
Q ss_pred c-cHHHHHHHhhhhccCCeEEEEEcChh----------------hHHHHHHHHHhcCCeEEEee--cCCCeeEEEEEe
Q 027609 147 K-SLKAVVAEVDRILRPDGNLILRDDAE----------------TIVEVEDLVKSLHWDVRMIY--TNDNQGMLCVHK 205 (221)
Q Consensus 147 ~-d~~~vL~EmdRVLRPGG~~ii~d~~~----------------~~~~i~~i~~~l~W~~~~~~--~~~~e~~l~~~K 205 (221)
. ++..+|.++.|+|||||++++.+... ..+.+.+++....|++.... .......|...|
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~p~~~l~~~~ 194 (203)
T 3h2b_A 117 PGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPRFPHAYLTAEA 194 (203)
T ss_dssp TTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTTSSEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCCCcchhhhhhh
Confidence 4 89999999999999999999996322 26889999999999986543 223444444444
No 18
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.59 E-value=4.6e-15 Score=125.69 Aligned_cols=133 Identities=17% Similarity=0.125 Sum_probs=102.3
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCc-cc-eeccccccCCCCCCccCeeeecc-ccccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGL-FG-LYHDWCESFNTYPRTYDLLHADH-LFSTI 145 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl-~~-~~~d~~e~f~~yp~sFDlVh~~~-v~~h~ 145 (221)
...+|||+|||+|.++..|++++. +++++|.+ .+++.+.++.- +. ...|.. .++ ++++||+|.|.. +++|+
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~~l~~~ 124 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFG---TVEGLELSADMLAIARRRNPDAVLHHGDMR-DFS-LGRRFSAVTCMFSSIGHL 124 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSS---EEEEEESCHHHHHHHHHHCTTSEEEECCTT-TCC-CSCCEEEEEECTTGGGGS
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhCCCCEEEECChH-HCC-ccCCcCEEEEcCchhhhc
Confidence 357899999999999999999864 57888986 59999988732 11 223432 232 369999999998 99998
Q ss_pred cc--cHHHHHHHhhhhccCCeEEEEEcCh---------------------------------------------------
Q 027609 146 KK--SLKAVVAEVDRILRPDGNLILRDDA--------------------------------------------------- 172 (221)
Q Consensus 146 ~~--d~~~vL~EmdRVLRPGG~~ii~d~~--------------------------------------------------- 172 (221)
.+ +...+|.++.|+|||||.+++.+..
T Consensus 125 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (263)
T 3pfg_A 125 AGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGIT 204 (263)
T ss_dssp CHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCcEE
Confidence 63 7778999999999999999995200
Q ss_pred ----------hhHHHHHHHHHhcCCeEEEee-cCCCeeEEEEEecc
Q 027609 173 ----------ETIVEVEDLVKSLHWDVRMIY-TNDNQGMLCVHKTY 207 (221)
Q Consensus 173 ----------~~~~~i~~i~~~l~W~~~~~~-~~~~e~~l~~~K~~ 207 (221)
...+++++++++-.+++.... ......+++|+|+-
T Consensus 205 ~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~K~a 250 (263)
T 3pfg_A 205 HHEESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGLPGA 250 (263)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEECC
T ss_pred EEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEecCC
Confidence 026889999999999886543 34567899999963
No 19
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.59 E-value=2.8e-15 Score=128.62 Aligned_cols=96 Identities=16% Similarity=0.138 Sum_probs=78.5
Q ss_pred CCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Ccc---ce-eccccccCCCCC-CccCeeeecc
Q 027609 71 VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLF---GL-YHDWCESFNTYP-RTYDLLHADH 140 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~---~~-~~d~~e~f~~yp-~sFDlVh~~~ 140 (221)
..+|||+|||+|.++..|++++. +++++|.+ .+++.+.++ |+. .. ..|. +.+++++ ++||+|+|..
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~fD~v~~~~ 144 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGH---QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAA-QDVASHLETPVDLILFHA 144 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCG-GGTGGGCSSCEEEEEEES
T ss_pred CCEEEEeCCcchHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCH-HHhhhhcCCCceEEEECc
Confidence 57899999999999999999865 46888886 588888776 431 12 2343 3355455 9999999999
Q ss_pred ccccccccHHHHHHHhhhhccCCeEEEEEcC
Q 027609 141 LFSTIKKSLKAVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~ 171 (221)
+++|+. ++..+|.|+.|+|||||++++.+.
T Consensus 145 ~l~~~~-~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 145 VLEWVA-DPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp CGGGCS-CHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhhccc-CHHHHHHHHHHHcCCCeEEEEEEe
Confidence 999998 899999999999999999999864
No 20
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.59 E-value=5.1e-15 Score=118.98 Aligned_cols=117 Identities=13% Similarity=0.186 Sum_probs=87.4
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc---eeccccccCCCCCCccCeeeecc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG---LYHDWCESFNTYPRTYDLLHADH 140 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~---~~~d~~e~f~~yp~sFDlVh~~~ 140 (221)
....+|||+|||+|.++..|++++. +++++|.+ .+++.+.++ |+.. ...|.. .++ ++++||+|.|..
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~-~~~~~D~v~~~~ 105 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANGY---DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLN-NLT-FDRQYDFILSTV 105 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGG-GCC-CCCCEEEEEEES
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchh-hCC-CCCCceEEEEcc
Confidence 3467999999999999999999864 57888886 477776654 3322 223432 233 379999999999
Q ss_pred ccccccc-cHHHHHHHhhhhccCCeEEEEEcCh--------------hhHHHHHHHHHhcCCeEEEe
Q 027609 141 LFSTIKK-SLKAVVAEVDRILRPDGNLILRDDA--------------ETIVEVEDLVKSLHWDVRMI 192 (221)
Q Consensus 141 v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~d~~--------------~~~~~i~~i~~~l~W~~~~~ 192 (221)
+++|+.. ++..+|.++.|+|||||++++.+.. ...+++++++.. |+....
T Consensus 106 ~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~ 170 (199)
T 2xvm_A 106 VLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKY 170 (199)
T ss_dssp CGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEe
Confidence 9999864 7899999999999999998876421 124677787776 887543
No 21
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.58 E-value=5.8e-15 Score=123.69 Aligned_cols=98 Identities=16% Similarity=0.265 Sum_probs=79.8
Q ss_pred CCCCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHcCc----cc-eeccccccCCCCC-CccCeeee
Q 027609 67 NWSFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYERGL----FG-LYHDWCESFNTYP-RTYDLLHA 138 (221)
Q Consensus 67 ~~~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eRGl----~~-~~~d~~e~f~~yp-~sFDlVh~ 138 (221)
......+|||+|||+|.++..|+++ +. +++++|.+ .+++.+.++.- +. ...|..+ + +++ ++||+|+|
T Consensus 52 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-~-~~~~~~fD~v~~ 126 (266)
T 3ujc_A 52 ELNENSKVLDIGSGLGGGCMYINEKYGA---HTHGIDICSNIVNMANERVSGNNKIIFEANDILT-K-EFPENNFDLIYS 126 (266)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTT-C-CCCTTCEEEEEE
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHhhcCCCeEEEECcccc-C-CCCCCcEEEEeH
Confidence 3445789999999999999999887 53 57888886 59999988842 11 2334332 3 466 99999999
Q ss_pred ccccccc--cccHHHHHHHhhhhccCCeEEEEEc
Q 027609 139 DHLFSTI--KKSLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 139 ~~v~~h~--~~d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
..+++|+ . ++..+|.|+.|+|||||++++.+
T Consensus 127 ~~~l~~~~~~-~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 127 RDAILALSLE-NKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp ESCGGGSCHH-HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHhcChH-HHHHHHHHHHHHcCCCCEEEEEE
Confidence 9999999 5 89999999999999999999996
No 22
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.58 E-value=9.1e-15 Score=120.89 Aligned_cols=95 Identities=20% Similarity=0.259 Sum_probs=74.9
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc-cce-eccccccCCCCCCccCeeeecc-c
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL-FGL-YHDWCESFNTYPRTYDLLHADH-L 141 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl-~~~-~~d~~e~f~~yp~sFDlVh~~~-v 141 (221)
...+|||+|||+|.++..|++++. +++++|.+ .+++.+.++ |+ +.. ..|.. .+ +++++||+|.|.. +
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~-~~~~~fD~v~~~~~~ 111 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFK---NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDIS-NL-NINRKFDLITCCLDS 111 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSS---EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGG-GC-CCSCCEEEEEECTTG
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCC---cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccc-cC-CccCCceEEEEcCcc
Confidence 567999999999999999999864 57888986 588887776 21 122 23332 23 2458999999998 9
Q ss_pred ccccc--ccHHHHHHHhhhhccCCeEEEEE
Q 027609 142 FSTIK--KSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 142 ~~h~~--~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
++|+. .++..+|.++.|+|||||.+++.
T Consensus 112 l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 112 TNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp GGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 99993 28999999999999999999985
No 23
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.58 E-value=1.1e-15 Score=128.14 Aligned_cols=117 Identities=13% Similarity=0.160 Sum_probs=89.5
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCccceeccccccCCCCC-CccCeeeeccccccccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLFGLYHDWCESFNTYP-RTYDLLHADHLFSTIKK 147 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~d~~e~f~~yp-~sFDlVh~~~v~~h~~~ 147 (221)
...+|||+|||+|.++..|++++.. ++++|.+ .+++.+.++ +.-...|..+.+.+++ ++||+|+|..+++|+..
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~~~~---v~gvD~s~~~~~~a~~~-~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~ 116 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKEEGIE---SIGVDINEDMIKFCEGK-FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDP 116 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHHHTCC---EEEECSCHHHHHHHHTT-SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCG
T ss_pred CCCeEEEEeCCCCHHHHHHHhCCCc---EEEEECCHHHHHHHHhh-cceeeccHHHHhhhcCCCCeeEEEECCchhhCCc
Confidence 3678999999999999999998753 5888986 599999888 3222334322222566 99999999999999984
Q ss_pred -cHHHHHHHhhhhccCCeEEEEEcChhh-------------------HHHHHHHHHhcCCeEE
Q 027609 148 -SLKAVVAEVDRILRPDGNLILRDDAET-------------------IVEVEDLVKSLHWDVR 190 (221)
Q Consensus 148 -d~~~vL~EmdRVLRPGG~~ii~d~~~~-------------------~~~i~~i~~~l~W~~~ 190 (221)
+...+|.|+.|+|||||++++.+.... .+.+.+++.+-.++..
T Consensus 117 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~ 179 (240)
T 3dli_A 117 ERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDV 179 (240)
T ss_dssp GGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEE
Confidence 459999999999999999999864321 2566677777777654
No 24
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.57 E-value=9.3e-15 Score=119.73 Aligned_cols=117 Identities=14% Similarity=0.118 Sum_probs=93.5
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc-CccceeccccccCCCCCCccCeeeeccccccccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER-GLFGLYHDWCESFNTYPRTYDLLHADHLFSTIKK 147 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR-Gl~~~~~d~~e~f~~yp~sFDlVh~~~v~~h~~~ 147 (221)
...+|||+|||+|.++..|++++. +++++|.+ .+++.+.++ ++.-...|. +.++ .+++||+|.|..+++|+..
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~~~~~ 117 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGF---DVDATDGSPELAAEASRRLGRPVRTMLF-HQLD-AIDAYDAVWAHACLLHVPR 117 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHTSCCEECCG-GGCC-CCSCEEEEEECSCGGGSCH
T ss_pred CCCcEEEECCCCCHHHHHHHHcCC---eEEEECCCHHHHHHHHHhcCCceEEeee-ccCC-CCCcEEEEEecCchhhcCH
Confidence 367999999999999999999864 56888886 589988887 433334443 2344 3499999999999999874
Q ss_pred -cHHHHHHHhhhhccCCeEEEEEcCh---------------hhHHHHHHHHHhcC-CeEEE
Q 027609 148 -SLKAVVAEVDRILRPDGNLILRDDA---------------ETIVEVEDLVKSLH-WDVRM 191 (221)
Q Consensus 148 -d~~~vL~EmdRVLRPGG~~ii~d~~---------------~~~~~i~~i~~~l~-W~~~~ 191 (221)
++..+|.|+.|+|||||++++.... ...+.+.++++.-. ++...
T Consensus 118 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~ 178 (211)
T 3e23_A 118 DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVA 178 (211)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEE
Confidence 7889999999999999999998432 13678999999888 98754
No 25
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.57 E-value=6e-15 Score=126.48 Aligned_cols=99 Identities=13% Similarity=0.176 Sum_probs=79.5
Q ss_pred CCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC--ccceeccccccCCCCCCccCeeeeccccc
Q 027609 67 NWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG--LFGLYHDWCESFNTYPRTYDLLHADHLFS 143 (221)
Q Consensus 67 ~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG--l~~~~~d~~e~f~~yp~sFDlVh~~~v~~ 143 (221)
......+|||+|||+|.++..|++.+. +++++|.+ .|++.+.++. +.-...|. +.++ ++++||+|+|..+++
T Consensus 54 ~~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~ 128 (279)
T 3ccf_A 54 NPQPGEFILDLGCGTGQLTEKIAQSGA---EVLGTDNAATMIEKARQNYPHLHFDVADA-RNFR-VDKPLDAVFSNAMLH 128 (279)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSCEEECCT-TTCC-CSSCEEEEEEESCGG
T ss_pred CCCCCCEEEEecCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHhhCCCCEEEECCh-hhCC-cCCCcCEEEEcchhh
Confidence 344578999999999999999998654 56888886 5999888873 11123343 3343 579999999999999
Q ss_pred cccccHHHHHHHhhhhccCCeEEEEEcC
Q 027609 144 TIKKSLKAVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 144 h~~~d~~~vL~EmdRVLRPGG~~ii~d~ 171 (221)
|+. |+..+|.|+.|+|||||++++.+.
T Consensus 129 ~~~-d~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 129 WVK-EPEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp GCS-CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hCc-CHHHHHHHHHHhcCCCcEEEEEec
Confidence 998 899999999999999999999854
No 26
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.57 E-value=1.8e-15 Score=126.88 Aligned_cols=116 Identities=12% Similarity=0.099 Sum_probs=88.0
Q ss_pred CCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHc----Ccc---ce-eccccccCCCCCCccCeeee
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYER----GLF---GL-YHDWCESFNTYPRTYDLLHA 138 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eR----Gl~---~~-~~d~~e~f~~yp~sFDlVh~ 138 (221)
....+|||+|||+|.++..|+++ +. +++++|.+ .+++.+.++ |+. .. ..|+. .++ ++++||+|+|
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~-~~~-~~~~fD~V~~ 109 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDHGI---TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA-GYV-ANEKCDVAAC 109 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHTCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT-TCC-CSSCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCC---eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH-hCC-cCCCCCEEEE
Confidence 34679999999999999999876 43 46888886 588877665 442 22 23432 233 3699999999
Q ss_pred ccccccccccHHHHHHHhhhhccCCeEEEEEcChh----------------------hHHHHHHHHHhcCCeEE
Q 027609 139 DHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDAE----------------------TIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 139 ~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~----------------------~~~~i~~i~~~l~W~~~ 190 (221)
..+++|+. ++..+|.|+.|+|||||++++.+... ..+++.+++....++..
T Consensus 110 ~~~~~~~~-~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 182 (256)
T 1nkv_A 110 VGATWIAG-GFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVV 182 (256)
T ss_dssp ESCGGGTS-SSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCC
T ss_pred CCChHhcC-CHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeE
Confidence 99999998 89999999999999999999986320 13567777777777653
No 27
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.57 E-value=3.9e-15 Score=125.21 Aligned_cols=104 Identities=19% Similarity=0.339 Sum_probs=81.1
Q ss_pred hhhcccCCCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc--e-eccccccCCCCC-
Q 027609 60 YLNGMGINWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG--L-YHDWCESFNTYP- 130 (221)
Q Consensus 60 Y~~~L~i~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~-~~d~~e~f~~yp- 130 (221)
+...+++. ...+|||+|||+|.++..|++++. +++++|.+ .+++.+.++ |+.+ . ..|. +.+ +++
T Consensus 13 ~~~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~-~~~~ 85 (239)
T 1xxl_A 13 MIKTAECR--AEHRVLDIGAGAGHTALAFSPYVQ---ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA-ESL-PFPD 85 (239)
T ss_dssp HHHHHTCC--TTCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT-TBC-CSCT
T ss_pred HHHHhCcC--CCCEEEEEccCcCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCCeEEEeccc-ccC-CCCC
Confidence 33444444 478999999999999999998864 57888886 588877664 4332 2 3343 334 366
Q ss_pred CccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEEcC
Q 027609 131 RTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 131 ~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~ 171 (221)
++||+|+|..+++|+. ++..+|.|+.|+|||||++++.+.
T Consensus 86 ~~fD~v~~~~~l~~~~-~~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 86 DSFDIITCRYAAHHFS-DVRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp TCEEEEEEESCGGGCS-CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcEEEEEECCchhhcc-CHHHHHHHHHHHcCCCcEEEEEEc
Confidence 9999999999999998 899999999999999999999853
No 28
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.57 E-value=3.8e-15 Score=124.54 Aligned_cols=123 Identities=14% Similarity=0.104 Sum_probs=94.1
Q ss_pred CCCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCc----cce-eccccccCCCCC-CccCeeee
Q 027609 66 INWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGL----FGL-YHDWCESFNTYP-RTYDLLHA 138 (221)
Q Consensus 66 i~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl----~~~-~~d~~e~f~~yp-~sFDlVh~ 138 (221)
+......+|||+|||+|.++..|++++.. +++++|.+ .+++.+.++.- +.. ..|+. .+ +++ ++||+|+|
T Consensus 89 l~~~~~~~vLDiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~-~~-~~~~~~fD~v~~ 164 (254)
T 1xtp_A 89 LPGHGTSRALDCGAGIGRITKNLLTKLYA--TTDLLEPVKHMLEEAKRELAGMPVGKFILASME-TA-TLPPNTYDLIVI 164 (254)
T ss_dssp STTCCCSEEEEETCTTTHHHHHTHHHHCS--EEEEEESCHHHHHHHHHHTTTSSEEEEEESCGG-GC-CCCSSCEEEEEE
T ss_pred hcccCCCEEEEECCCcCHHHHHHHHhhcC--EEEEEeCCHHHHHHHHHHhccCCceEEEEccHH-HC-CCCCCCeEEEEE
Confidence 33445789999999999999999887522 57888876 58998888732 222 33432 23 366 89999999
Q ss_pred ccccccccc-cHHHHHHHhhhhccCCeEEEEEcChh----------------hHHHHHHHHHhcCCeEEEe
Q 027609 139 DHLFSTIKK-SLKAVVAEVDRILRPDGNLILRDDAE----------------TIVEVEDLVKSLHWDVRMI 192 (221)
Q Consensus 139 ~~v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~d~~~----------------~~~~i~~i~~~l~W~~~~~ 192 (221)
..+++|++. ++..+|.++.|+|||||++++.+... ..+.+.++++.-.++....
T Consensus 165 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 235 (254)
T 1xtp_A 165 QWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKE 235 (254)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEE
T ss_pred cchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEe
Confidence 999999963 78999999999999999999997410 2477888888888887543
No 29
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.56 E-value=5.1e-15 Score=127.49 Aligned_cols=98 Identities=22% Similarity=0.292 Sum_probs=78.3
Q ss_pred CCCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHc----Ccc---ce-eccccccCCCCC-CccCee
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYER----GLF---GL-YHDWCESFNTYP-RTYDLL 136 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eR----Gl~---~~-~~d~~e~f~~yp-~sFDlV 136 (221)
.....+|||+|||+|.++..|+++ +. +++++|.+ .+++.+.++ |+. .. ..|.. .+ +|+ ++||+|
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~-~~~~~~fD~v 154 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFGV---SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL-EI-PCEDNSYDFI 154 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT-SC-SSCTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcc-cC-CCCCCCEeEE
Confidence 345789999999999999999887 54 57888886 588877665 332 22 23432 23 466 899999
Q ss_pred eeccccccccccHHHHHHHhhhhccCCeEEEEEcC
Q 027609 137 HADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 137 h~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~ 171 (221)
+|..+++|+. ++..+|.|+.|+|||||++++.+.
T Consensus 155 ~~~~~l~~~~-~~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 155 WSQDAFLHSP-DKLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp EEESCGGGCS-CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EecchhhhcC-CHHHHHHHHHHHcCCCeEEEEEEe
Confidence 9999999999 899999999999999999999963
No 30
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.55 E-value=1.1e-14 Score=127.06 Aligned_cols=98 Identities=10% Similarity=0.165 Sum_probs=78.0
Q ss_pred CCCCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHc----Cccc---e-eccccccCCCCCCccCee
Q 027609 67 NWSFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYER----GLFG---L-YHDWCESFNTYPRTYDLL 136 (221)
Q Consensus 67 ~~~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eR----Gl~~---~-~~d~~e~f~~yp~sFDlV 136 (221)
......+|||+|||+|.++..|+++ +. +++++|.+ ++++.+.++ |+.. . ..| +..+|++||+|
T Consensus 87 ~~~~~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d----~~~~~~~fD~v 159 (318)
T 2fk8_A 87 DLKPGMTLLDIGCGWGTTMRRAVERFDV---NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQG----WEDFAEPVDRI 159 (318)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC----GGGCCCCCSEE
T ss_pred CCCCcCEEEEEcccchHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC----hHHCCCCcCEE
Confidence 3345779999999999999999887 64 57888886 588888776 4322 2 223 22346999999
Q ss_pred eeccccccccc-cHHHHHHHhhhhccCCeEEEEEcC
Q 027609 137 HADHLFSTIKK-SLKAVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 137 h~~~v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~d~ 171 (221)
.|..+++|+.. ++..+|.|+.|+|||||.+++.+.
T Consensus 160 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 160 VSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp EEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred EEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 99999999953 899999999999999999999864
No 31
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.55 E-value=6.8e-15 Score=127.72 Aligned_cols=97 Identities=11% Similarity=0.140 Sum_probs=76.7
Q ss_pred CCCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHc----Cccc---e-eccccccCCCCCCccCeee
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYER----GLFG---L-YHDWCESFNTYPRTYDLLH 137 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eR----Gl~~---~-~~d~~e~f~~yp~sFDlVh 137 (221)
.....+|||+|||+|.++..|+++ +. +++++|.+ ++++.+.++ |+.+ . ..|+. .++++||+|+
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~----~~~~~fD~v~ 142 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYDV---NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWE----EFDEPVDRIV 142 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCC---EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGG----GCCCCCSEEE
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHH----HcCCCccEEE
Confidence 345789999999999999999987 63 57888986 588877766 4432 2 23432 2389999999
Q ss_pred eccccccccc--------cHHHHHHHhhhhccCCeEEEEEcC
Q 027609 138 ADHLFSTIKK--------SLKAVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 138 ~~~v~~h~~~--------d~~~vL~EmdRVLRPGG~~ii~d~ 171 (221)
|..+++|+++ +...+|.|+.|+|||||.+++.+.
T Consensus 143 ~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 143 SLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp EESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred EcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 9999999951 347999999999999999999864
No 32
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.55 E-value=5.2e-15 Score=122.88 Aligned_cols=115 Identities=19% Similarity=0.158 Sum_probs=91.4
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCccc----eeccccccCCCCC-CccCeeeeccccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLFG----LYHDWCESFNTYP-RTYDLLHADHLFS 143 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~~----~~~d~~e~f~~yp-~sFDlVh~~~v~~ 143 (221)
...+|||+|||+|.++..|++++. +++++|.+ .+++.+.+++... ...|.. .+ +++ ++||+|+|..+++
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~-~~-~~~~~~fD~v~~~~~l~ 127 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGY---KAVGVDISEVMIQKGKERGEGPDLSFIKGDLS-SL-PFENEQFEAIMAINSLE 127 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHTTTCBTTEEEEECBTT-BC-SSCTTCEEEEEEESCTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhcccCCceEEEcchh-cC-CCCCCCccEEEEcChHh
Confidence 467999999999999999999865 46888886 5999998884211 223432 23 365 9999999999999
Q ss_pred cccccHHHHHHHhhhhccCCeEEEEEcChh----------------------hHHHHHHHHHhcCCeEE
Q 027609 144 TIKKSLKAVVAEVDRILRPDGNLILRDDAE----------------------TIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 144 h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~----------------------~~~~i~~i~~~l~W~~~ 190 (221)
|+. ++..+|.|+.|+|||||++++.+... ..+.+++++..-.+++.
T Consensus 128 ~~~-~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 195 (242)
T 3l8d_A 128 WTE-EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVV 195 (242)
T ss_dssp SSS-CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEE
T ss_pred hcc-CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEE
Confidence 998 89999999999999999999986211 13568888888888865
No 33
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.54 E-value=2.8e-14 Score=118.40 Aligned_cols=98 Identities=16% Similarity=0.222 Sum_probs=75.3
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCc----cc-eeccccccCCCCCCccCeeeecccc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGL----FG-LYHDWCESFNTYPRTYDLLHADHLF 142 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl----~~-~~~d~~e~f~~yp~sFDlVh~~~v~ 142 (221)
....+|||+|||+|.++..|+++.- ..+++++|.+ .+++.+.++-- +. ...|. +.+ +++++||+|.|..++
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~-~~~-~~~~~fD~v~~~~~l 119 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADY-SKY-DFEEKYDMVVSALSI 119 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCT-TTC-CCCSCEEEEEEESCG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhhccCCCEEEEeCch-hcc-CCCCCceEEEEeCcc
Confidence 3568999999999999999988721 1257888886 59998888721 11 22332 222 244999999999999
Q ss_pred ccccccHH--HHHHHhhhhccCCeEEEEEc
Q 027609 143 STIKKSLK--AVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 143 ~h~~~d~~--~vL~EmdRVLRPGG~~ii~d 170 (221)
+|+. ++. .+|.|+.|+|||||.+++.+
T Consensus 120 ~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 120 HHLE-DEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp GGSC-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCC-HHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9998 555 59999999999999999987
No 34
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.54 E-value=2.7e-14 Score=118.06 Aligned_cols=114 Identities=17% Similarity=0.164 Sum_probs=82.2
Q ss_pred hhhHHHHHhhhhhccc-CCCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCc-cce-ecccccc
Q 027609 50 QHWKNVVSKSYLNGMG-INWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGL-FGL-YHDWCES 125 (221)
Q Consensus 50 ~~W~~~v~~~Y~~~L~-i~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl-~~~-~~d~~e~ 125 (221)
..|...... +...+. .. ....+|||+|||+|.++..|++++. +++++|.+ .+++.+.++.- +.. ..|.. .
T Consensus 21 ~~~~~~~~~-~~~~l~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~-~ 94 (239)
T 3bxo_A 21 KDYAAEASD-IADLVRSRT-PEASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDMR-D 94 (239)
T ss_dssp CCHHHHHHH-HHHHHHHHC-TTCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCTT-T
T ss_pred hhHHHHHHH-HHHHHHHhc-CCCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCHH-H
Confidence 455555543 333333 11 3467999999999999999998754 57888886 59999888731 122 23432 2
Q ss_pred CCCCCCccCeeeec-cccccccc--cHHHHHHHhhhhccCCeEEEEEc
Q 027609 126 FNTYPRTYDLLHAD-HLFSTIKK--SLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 126 f~~yp~sFDlVh~~-~v~~h~~~--d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
++ ++++||+|.|. .+++|+.+ ++..+|.++.|+|||||.+++.+
T Consensus 95 ~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 95 FR-LGRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CC-CSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred cc-cCCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 32 36899999965 58988852 77899999999999999999984
No 35
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.54 E-value=1.3e-14 Score=121.61 Aligned_cols=118 Identities=14% Similarity=0.138 Sum_probs=91.1
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCcc------ce-eccccccCCCCC-CccCeeeecc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLF------GL-YHDWCESFNTYP-RTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~------~~-~~d~~e~f~~yp-~sFDlVh~~~ 140 (221)
...+|||+|||+|.++..|++++. .+++++|.+ .+++.+.++.-. .. ..|+ +.++ ++ ++||+|.|..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~-~~~~~fD~v~~~~ 154 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLF--REVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGL-QDFT-PEPDSYDVIWIQW 154 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTC--SEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCG-GGCC-CCSSCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcCh-hhcC-CCCCCEEEEEEcc
Confidence 478999999999999999988862 257888986 589988877421 12 2342 2233 45 7999999999
Q ss_pred ccccccccH--HHHHHHhhhhccCCeEEEEEcChh---------------hHHHHHHHHHhcCCeEEEe
Q 027609 141 LFSTIKKSL--KAVVAEVDRILRPDGNLILRDDAE---------------TIVEVEDLVKSLHWDVRMI 192 (221)
Q Consensus 141 v~~h~~~d~--~~vL~EmdRVLRPGG~~ii~d~~~---------------~~~~i~~i~~~l~W~~~~~ 192 (221)
+++|+. ++ ..+|.|+.|+|||||++++.+... ..+++.+++....++....
T Consensus 155 ~l~~~~-~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 155 VIGHLT-DQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAE 222 (241)
T ss_dssp CGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEE
T ss_pred hhhhCC-HHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEe
Confidence 999998 54 489999999999999999976421 3678888898888887543
No 36
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.54 E-value=7.5e-15 Score=120.04 Aligned_cols=95 Identities=19% Similarity=0.239 Sum_probs=76.1
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC-ccce-eccccccCCCCC-CccCeeeeccccccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG-LFGL-YHDWCESFNTYP-RTYDLLHADHLFSTI 145 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG-l~~~-~~d~~e~f~~yp-~sFDlVh~~~v~~h~ 145 (221)
...+|||+|||+|.++..| +.. +++++|.+ .+++.+.++. -+.. ..|. +.+ +++ ++||+|.|..+++|+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-~~~-~~~~~~fD~v~~~~~l~~~ 108 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYP--QKVGVEPSEAMLAVGRRRAPEATWVRAWG-EAL-PFPGESFDVVLLFTTLEFV 108 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCS--EEEEECCCHHHHHHHHHHCTTSEEECCCT-TSC-CSCSSCEEEEEEESCTTTC
T ss_pred CCCeEEEECCCCCHhHHhC---CCC--eEEEEeCCHHHHHHHHHhCCCcEEEEccc-ccC-CCCCCcEEEEEEcChhhhc
Confidence 5789999999999999998 431 46888886 5999888873 1122 2342 223 366 899999999999999
Q ss_pred cccHHHHHHHhhhhccCCeEEEEEcCh
Q 027609 146 KKSLKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 146 ~~d~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
. ++..+|.|+.|+|||||.+++.+..
T Consensus 109 ~-~~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 109 E-DVERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp S-CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred C-CHHHHHHHHHHHcCCCCEEEEEecC
Confidence 8 8999999999999999999999754
No 37
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.54 E-value=5.1e-14 Score=113.10 Aligned_cols=133 Identities=17% Similarity=0.120 Sum_probs=88.2
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc--cceeccccccCCCCC-CccCeeeec-c
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL--FGLYHDWCESFNTYP-RTYDLLHAD-H 140 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl--~~~~~d~~e~f~~yp-~sFDlVh~~-~ 140 (221)
...+|||+|||+|.++..|++++. +|+++|.+ .+++.+.++ |+ +..+++-.+.+..++ ++||+|.++ .
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~~~---~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~ 98 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGLSK---KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLG 98 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTSS---EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCC
Confidence 367899999999999999999843 46889986 588877765 44 223444344444455 899999887 3
Q ss_pred cccc-------ccccHHHHHHHhhhhccCCeEEEEEcCh------hhHHHHHHHHHhcC---CeEEEee---c-CCCeeE
Q 027609 141 LFST-------IKKSLKAVVAEVDRILRPDGNLILRDDA------ETIVEVEDLVKSLH---WDVRMIY---T-NDNQGM 200 (221)
Q Consensus 141 v~~h-------~~~d~~~vL~EmdRVLRPGG~~ii~d~~------~~~~~i~~i~~~l~---W~~~~~~---~-~~~e~~ 200 (221)
.+.+ ..++...+|.|+.|+|||||.+++.... +..+.+.+.+..+. |.+.... . +....+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 178 (185)
T 3mti_A 99 YLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLNQINTPPFL 178 (185)
T ss_dssp -----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESSCSSCCCEE
T ss_pred CCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhccCCCCCeE
Confidence 3332 2236778999999999999999987532 23456666666665 6654332 2 233455
Q ss_pred EEEEe
Q 027609 201 LCVHK 205 (221)
Q Consensus 201 l~~~K 205 (221)
++..|
T Consensus 179 ~~i~~ 183 (185)
T 3mti_A 179 VMLEK 183 (185)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 55544
No 38
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.54 E-value=3.7e-14 Score=118.84 Aligned_cols=98 Identities=22% Similarity=0.174 Sum_probs=77.6
Q ss_pred CCCCCeEEeecCcchHHHHHHhhC--CCeEEEeccCCCC-CCHHHHHHcCc-cc-eeccccccCCCCCCccCeeeecccc
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDL--KVWVMNVVPIESP-DTLPIIYERGL-FG-LYHDWCESFNTYPRTYDLLHADHLF 142 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~--~v~vmnv~~~d~~-~~l~~a~eRGl-~~-~~~d~~e~f~~yp~sFDlVh~~~v~ 142 (221)
.....+|||+|||+|.++..|+++ +. +++++|.+ .+++.+.++.- +. ...|. +.++ .+++||+|+|+.++
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l 105 (259)
T 2p35_A 31 LERVLNGYDLGCGPGNSTELLTDRYGVN---VITGIDSDDDMLEKAADRLPNTNFGKADL-ATWK-PAQKADLLYANAVF 105 (259)
T ss_dssp CSCCSSEEEETCTTTHHHHHHHHHHCTT---SEEEEESCHHHHHHHHHHSTTSEEEECCT-TTCC-CSSCEEEEEEESCG
T ss_pred CCCCCEEEEecCcCCHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHhCCCcEEEECCh-hhcC-ccCCcCEEEEeCch
Confidence 344679999999999999999887 44 35788886 59999888721 11 22342 3343 24899999999999
Q ss_pred ccccccHHHHHHHhhhhccCCeEEEEEcC
Q 027609 143 STIKKSLKAVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 143 ~h~~~d~~~vL~EmdRVLRPGG~~ii~d~ 171 (221)
+|+. ++..+|.|+.|+|||||++++.+.
T Consensus 106 ~~~~-~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 106 QWVP-DHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp GGST-THHHHHHHHGGGEEEEEEEEEEEE
T ss_pred hhCC-CHHHHHHHHHHhcCCCeEEEEEeC
Confidence 9998 899999999999999999999864
No 39
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.53 E-value=1.4e-14 Score=120.06 Aligned_cols=101 Identities=14% Similarity=0.207 Sum_probs=81.2
Q ss_pred CCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCc---cc-eeccccccCCCCC-CccCeeeeccc
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGL---FG-LYHDWCESFNTYP-RTYDLLHADHL 141 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl---~~-~~~d~~e~f~~yp-~sFDlVh~~~v 141 (221)
.....+|||+|||+|.++..|++++.. +++++|.+ .+++.+.++.- +. ...|.. .+ +++ ++||+|.|..+
T Consensus 41 ~~~~~~vLdiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~-~~-~~~~~~fD~v~~~~~ 116 (243)
T 3bkw_A 41 EVGGLRIVDLGCGFGWFCRWAHEHGAS--YVLGLDLSEKMLARARAAGPDTGITYERADLD-KL-HLPQDSFDLAYSSLA 116 (243)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHTSCSSSEEEEECCGG-GC-CCCTTCEEEEEEESC
T ss_pred ccCCCEEEEEcCcCCHHHHHHHHCCCC--eEEEEcCCHHHHHHHHHhcccCCceEEEcChh-hc-cCCCCCceEEEEecc
Confidence 345789999999999999999998752 56888886 59999988842 12 223432 23 365 89999999999
Q ss_pred cccccccHHHHHHHhhhhccCCeEEEEEcChh
Q 027609 142 FSTIKKSLKAVVAEVDRILRPDGNLILRDDAE 173 (221)
Q Consensus 142 ~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~ 173 (221)
++|+. ++..+|.++.|+|||||.+++.+.++
T Consensus 117 l~~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~ 147 (243)
T 3bkw_A 117 LHYVE-DVARLFRTVHQALSPGGHFVFSTEHP 147 (243)
T ss_dssp GGGCS-CHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred ccccc-hHHHHHHHHHHhcCcCcEEEEEeCCc
Confidence 99998 89999999999999999999987553
No 40
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.53 E-value=1.5e-14 Score=126.14 Aligned_cols=134 Identities=15% Similarity=0.023 Sum_probs=97.8
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC----cc---ce-eccccccCCCCCCccCeeeecc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG----LF---GL-YHDWCESFNTYPRTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG----l~---~~-~~d~~e~f~~yp~sFDlVh~~~ 140 (221)
...+|||+|||+|.++..|+.......+++++|.+ .+++.+.++. +. .. ..|..+ + +++++||+|.|..
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~-~~~~~fD~v~~~~ 195 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWK-L-DTREGYDLLTSNG 195 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGG-C-CCCSCEEEEECCS
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhc-C-CccCCeEEEEECC
Confidence 46789999999999999995221112257888986 5888887662 22 12 234332 3 3569999999999
Q ss_pred ccccccccHHH---HHHHhhhhccCCeEEEEEcCh---------------------------------------hhHHHH
Q 027609 141 LFSTIKKSLKA---VVAEVDRILRPDGNLILRDDA---------------------------------------ETIVEV 178 (221)
Q Consensus 141 v~~h~~~d~~~---vL~EmdRVLRPGG~~ii~d~~---------------------------------------~~~~~i 178 (221)
+++|++ ++.. +|.|+.|+|||||++++.+.. ...+.+
T Consensus 196 ~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (305)
T 3ocj_A 196 LNIYEP-DDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQT 274 (305)
T ss_dssp SGGGCC-CHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHH
T ss_pred hhhhcC-CHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHH
Confidence 999998 5665 799999999999999998721 136778
Q ss_pred HHHHHhcCCeEEEee--cCCCeeEEEEEec
Q 027609 179 EDLVKSLHWDVRMIY--TNDNQGMLCVHKT 206 (221)
Q Consensus 179 ~~i~~~l~W~~~~~~--~~~~e~~l~~~K~ 206 (221)
.++++.-.++..... ....-..++++|+
T Consensus 275 ~~~l~~aGF~~v~~~~~~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 275 RAQLEEAGFTDLRFEDDRARLFPTVIARKP 304 (305)
T ss_dssp HHHHHHTTCEEEEEECCTTSSSCEEEEECC
T ss_pred HHHHHHCCCEEEEEEcccCceeeEEEEecC
Confidence 889999999876443 2334567888885
No 41
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.53 E-value=1e-14 Score=123.71 Aligned_cols=97 Identities=23% Similarity=0.319 Sum_probs=77.4
Q ss_pred CCCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHc----Cccc---e-eccccccCCCCC-CccCee
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYER----GLFG---L-YHDWCESFNTYP-RTYDLL 136 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eR----Gl~~---~-~~d~~e~f~~yp-~sFDlV 136 (221)
.....+|||+|||+|.++..|+++ +. +++++|.+ .+++.+.++ |+.. . ..|.. .+ +++ ++||+|
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~-~~~~~~fD~v 133 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATARDV---RVTGISISRPQVNQANARATAAGLANRVTFSYADAM-DL-PFEDASFDAV 133 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHSCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SC-CSCTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccc-cC-CCCCCCccEE
Confidence 345789999999999999999875 43 57888886 588877665 4422 2 23432 23 466 899999
Q ss_pred eeccccccccccHHHHHHHhhhhccCCeEEEEEc
Q 027609 137 HADHLFSTIKKSLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 137 h~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
+|..+++|+. ++..+|.|+.|+|||||.+++.+
T Consensus 134 ~~~~~l~~~~-~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 134 WALESLHHMP-DRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp EEESCTTTSS-CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEechhhhCC-CHHHHHHHHHHHcCCCeEEEEEE
Confidence 9999999998 89999999999999999999986
No 42
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.53 E-value=2.9e-15 Score=124.15 Aligned_cols=117 Identities=8% Similarity=0.056 Sum_probs=84.2
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC-c-----------------cce-eccccccCCCC
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG-L-----------------FGL-YHDWCESFNTY 129 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG-l-----------------~~~-~~d~~e~f~~y 129 (221)
...+|||+|||+|.++..|++++. +|+++|.+ .|++.+.++. . +.. ..|.. .+++.
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g~---~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~-~l~~~ 97 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQGY---HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF-ALTAR 97 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHCC---EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS-SSTHH
T ss_pred CCCEEEEeCCCCcHhHHHHHHCCC---eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccc-cCCcc
Confidence 367899999999999999999874 57999987 5999998871 1 111 23422 23222
Q ss_pred C-CccCeeeeccccccccc-cHHHHHHHhhhhccCCeEE-EEE-cCh-------h---hHHHHHHHHHhcCCeEEE
Q 027609 130 P-RTYDLLHADHLFSTIKK-SLKAVVAEVDRILRPDGNL-ILR-DDA-------E---TIVEVEDLVKSLHWDVRM 191 (221)
Q Consensus 130 p-~sFDlVh~~~v~~h~~~-d~~~vL~EmdRVLRPGG~~-ii~-d~~-------~---~~~~i~~i~~~l~W~~~~ 191 (221)
+ ++||+|.|..+|+|++. +...++.|+.|+|||||.+ ++. +.. + ..+++++++.. .|++..
T Consensus 98 ~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~ 172 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTK 172 (203)
T ss_dssp HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEE
T ss_pred cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEE
Confidence 2 69999999999998874 5677999999999999983 332 211 1 25677777777 777643
No 43
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.53 E-value=3.1e-14 Score=113.13 Aligned_cols=130 Identities=16% Similarity=0.225 Sum_probs=92.0
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc----e-eccccccCCCCC-CccCeeee
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG----L-YHDWCESFNTYP-RTYDLLHA 138 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~----~-~~d~~e~f~~yp-~sFDlVh~ 138 (221)
...+|||+|||+|.++..+++++. +++++|.+ .+++.+.++ |+.. . ..|+.+ +++ ++||+|.|
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~D~v~~ 125 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADEVK---STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE---NVKDRKYNKIIT 125 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT---TCTTSCEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc---ccccCCceEEEE
Confidence 577999999999999999988843 57888876 577777765 4332 2 234322 334 89999999
Q ss_pred ccccccccccHHHHHHHhhhhccCCeEEEEEcChhh-HHHHHHHHHhcCCeEEEeecCCCeeEEEEEe
Q 027609 139 DHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDAET-IVEVEDLVKSLHWDVRMIYTNDNQGMLCVHK 205 (221)
Q Consensus 139 ~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~~-~~~i~~i~~~l~W~~~~~~~~~~e~~l~~~K 205 (221)
+..+++-..+...++.++.|+|||||.+++.+.... ...+.+.++..-+++......+.-.++.++|
T Consensus 126 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k 193 (194)
T 1dus_A 126 NPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVETVTIKGGYRVLKSKK 193 (194)
T ss_dssp CCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCCEEEEEETTEEEEEEEC
T ss_pred CCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhcceEEEecCCcEEEEEEee
Confidence 988876333788999999999999999999976543 3445555555544544444444556666655
No 44
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.53 E-value=9.2e-15 Score=119.92 Aligned_cols=101 Identities=15% Similarity=0.288 Sum_probs=79.0
Q ss_pred CCCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCc----cce-eccccccCCCCCCccCeeeec
Q 027609 66 INWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGL----FGL-YHDWCESFNTYPRTYDLLHAD 139 (221)
Q Consensus 66 i~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl----~~~-~~d~~e~f~~yp~sFDlVh~~ 139 (221)
+......+|||+|||+|.++..|++++ .+++++|.+ .+++.+.++.- +.. ..|. +.++ .+++||+|.|.
T Consensus 47 ~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~ 121 (216)
T 3ofk_A 47 LSSGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAATDI-LQFS-TAELFDLIVVA 121 (216)
T ss_dssp TTTSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCT-TTCC-CSCCEEEEEEE
T ss_pred cccCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEEcch-hhCC-CCCCccEEEEc
Confidence 445567899999999999999999885 368899986 59998888732 122 2343 2233 23999999999
Q ss_pred cccccccccH---HHHHHHhhhhccCCeEEEEEcCh
Q 027609 140 HLFSTIKKSL---KAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 140 ~v~~h~~~d~---~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
.+++|+. ++ ..+|.++.|+|||||++++++..
T Consensus 122 ~~l~~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 122 EVLYYLE-DMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp SCGGGSS-SHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred cHHHhCC-CHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 9999998 55 57799999999999999998643
No 45
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.53 E-value=8.6e-14 Score=110.61 Aligned_cols=132 Identities=11% Similarity=0.115 Sum_probs=98.1
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCc-cce-eccccccCCCCC-CccCeeeec-ccccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGL-FGL-YHDWCESFNTYP-RTYDLLHAD-HLFST 144 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl-~~~-~~d~~e~f~~yp-~sFDlVh~~-~v~~h 144 (221)
...+|||+|||+|.++..|++++. +++++|.+ .+++.+.++.- +.. ..|..+ + +++ ++||+|.|+ .+++|
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~-~-~~~~~~~D~i~~~~~~~~~ 120 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGH---DVLGTDLDPILIDYAKQDFPEARWVVGDLSV-D-QISETDFDLIVSAGNVMGF 120 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSEEEECCTTT-S-CCCCCCEEEEEECCCCGGG
T ss_pred CCCeEEEECCCCCHHHHHHHHCCC---cEEEEcCCHHHHHHHHHhCCCCcEEEccccc-C-CCCCCceeEEEECCcHHhh
Confidence 467999999999999999999864 57888886 58888887731 122 234322 2 355 899999998 78887
Q ss_pred ccc-cHHHHHHHhhhhccCCeEEEEEcChh---hHHHHHHHHHhcCCeEEEeec---------CCCeeEEEEEec
Q 027609 145 IKK-SLKAVVAEVDRILRPDGNLILRDDAE---TIVEVEDLVKSLHWDVRMIYT---------NDNQGMLCVHKT 206 (221)
Q Consensus 145 ~~~-d~~~vL~EmdRVLRPGG~~ii~d~~~---~~~~i~~i~~~l~W~~~~~~~---------~~~e~~l~~~K~ 206 (221)
... +...+|.++.|+|||||.+++..... ..+.+.+++....+++..... ...--+++++|+
T Consensus 121 ~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 121 LAEDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFESWDLKPFVQGSEFLVAVFTKK 195 (195)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESSTTCCBCCTTCSEEEEEEEEC
T ss_pred cChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecccccCcCCCCCcEEEEEEecC
Confidence 753 67899999999999999999986543 367888888888888764321 124556777764
No 46
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.53 E-value=9.3e-15 Score=124.61 Aligned_cols=97 Identities=20% Similarity=0.274 Sum_probs=76.6
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCccceeccccccCCCCC-CccCeeeecccccccc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLFGLYHDWCESFNTYP-RTYDLLHADHLFSTIK 146 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~d~~e~f~~yp-~sFDlVh~~~v~~h~~ 146 (221)
....+|||+|||+|.++..|++.+. +++++|.+ .+++.+.++.-+..+..-++.+ +++ ++||+|+|..+++|+.
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~-~~~~~~fD~v~~~~~l~~~~ 108 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQGL---FVYAVEPSIVMRQQAVVHPQVEWFTGYAENL-ALPDKSVDGVISILAIHHFS 108 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTTTC---EEEEECSCHHHHHSSCCCTTEEEECCCTTSC-CSCTTCBSEEEEESCGGGCS
T ss_pred CCCCEEEEEcCcccHHHHHHHhCCC---EEEEEeCCHHHHHHHHhccCCEEEECchhhC-CCCCCCEeEEEEcchHhhcc
Confidence 4578999999999999999998764 56888886 4777666664222333223334 466 9999999999999998
Q ss_pred ccHHHHHHHhhhhccCCeEEEEEcC
Q 027609 147 KSLKAVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 147 ~d~~~vL~EmdRVLRPGG~~ii~d~ 171 (221)
++..+|.|+.|+|| ||++++.+.
T Consensus 109 -~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 109 -HLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp -SHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred -CHHHHHHHHHHHhC-CcEEEEEEc
Confidence 89999999999999 998888754
No 47
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.52 E-value=1e-14 Score=122.33 Aligned_cols=119 Identities=11% Similarity=0.099 Sum_probs=89.0
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCc--------------------------------
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGL-------------------------------- 115 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl-------------------------------- 115 (221)
....+|||+|||+|.++..|+.++. .+++++|.+ .+++.+.++.-
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 4568999999999999999988764 368999987 58888766521
Q ss_pred ---c-ce-eccccccCCCC-C---CccCeeeeccccc----cccccHHHHHHHhhhhccCCeEEEEEcChh---------
Q 027609 116 ---F-GL-YHDWCESFNTY-P---RTYDLLHADHLFS----TIKKSLKAVVAEVDRILRPDGNLILRDDAE--------- 173 (221)
Q Consensus 116 ---~-~~-~~d~~e~f~~y-p---~sFDlVh~~~v~~----h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~--------- 173 (221)
+ .. ..|..+ ..++ + ++||+|.|..+++ +.. ++..+|.++.|+|||||++++.+...
T Consensus 133 ~~~v~~~~~~d~~~-~~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~ 210 (265)
T 2i62_A 133 RRAIKQVLKCDVTQ-SQPLGGVSLPPADCLLSTLCLDAACPDLP-AYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQ 210 (265)
T ss_dssp HHHEEEEEECCTTS-SSTTTTCCCCCEEEEEEESCHHHHCSSHH-HHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTE
T ss_pred hhhheeEEEeeecc-CCCCCccccCCccEEEEhhhhhhhcCChH-HHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCc
Confidence 1 11 234332 2221 3 7999999999998 444 79999999999999999999986211
Q ss_pred -------hHHHHHHHHHhcCCeEEE
Q 027609 174 -------TIVEVEDLVKSLHWDVRM 191 (221)
Q Consensus 174 -------~~~~i~~i~~~l~W~~~~ 191 (221)
..+.+.+++....+++..
T Consensus 211 ~~~~~~~~~~~~~~~l~~aGf~~~~ 235 (265)
T 2i62_A 211 KFSSLPLGWETVRDAVEEAGYTIEQ 235 (265)
T ss_dssp EEECCCCCHHHHHHHHHHTTCEEEE
T ss_pred cccccccCHHHHHHHHHHCCCEEEE
Confidence 245888888888888754
No 48
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.52 E-value=6.4e-15 Score=126.42 Aligned_cols=98 Identities=13% Similarity=0.228 Sum_probs=77.6
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC----c----cc---eeccccccCCC--CC-CccC
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG----L----FG---LYHDWCESFNT--YP-RTYD 134 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG----l----~~---~~~d~~e~f~~--yp-~sFD 134 (221)
...+|||+|||+|.++..|++++. +++++|.+ .+++.+.++. . .. ...|+.+ ++. ++ ++||
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~fD 132 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT-LDKDVPAGDGFD 132 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG-HHHHSCCTTCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh-CccccccCCCeE
Confidence 467999999999999999999975 67899987 5898887652 1 11 1223221 210 45 9999
Q ss_pred eeeec-ccccccccc-------HHHHHHHhhhhccCCeEEEEEcCh
Q 027609 135 LLHAD-HLFSTIKKS-------LKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 135 lVh~~-~v~~h~~~d-------~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
+|+|. .+++|+. + +..+|.|+.|+|||||++++...+
T Consensus 133 ~V~~~g~~l~~~~-~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 133 AVICLGNSFAHLP-DSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EEEECTTCGGGSC-CSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEEEcChHHhhcC-ccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 99998 8999998 7 999999999999999999999765
No 49
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.52 E-value=2.1e-14 Score=118.37 Aligned_cols=101 Identities=17% Similarity=0.216 Sum_probs=76.6
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc-------cce-eccccccCCCCC-CccCe
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL-------FGL-YHDWCESFNTYP-RTYDL 135 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl-------~~~-~~d~~e~f~~yp-~sFDl 135 (221)
...+|||+|||+|.++..|++++-. .+++++|.+ .+++.+.++ |+ +.. ..|. + ..+++ ++||+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~-~~~~~~~~fD~ 105 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFF-EQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGAL-T-YQDKRFHGYDA 105 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTC-SEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCT-T-SCCGGGCSCSE
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCC-CEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCc-c-cccccCCCcCE
Confidence 4679999999999999999987521 257888986 588888776 11 112 2332 1 23344 89999
Q ss_pred eeeccccccccc-cHHHHHHHhhhhccCCeEEEEEcChh
Q 027609 136 LHADHLFSTIKK-SLKAVVAEVDRILRPDGNLILRDDAE 173 (221)
Q Consensus 136 Vh~~~v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~d~~~ 173 (221)
|.|..+++|+.. +...+|.++.|+|||||.+++.+..+
T Consensus 106 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 144 (217)
T 3jwh_A 106 ATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIE 144 (217)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHH
T ss_pred EeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcc
Confidence 999999999983 33899999999999999888886643
No 50
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.52 E-value=1.9e-14 Score=123.46 Aligned_cols=120 Identities=12% Similarity=0.039 Sum_probs=86.7
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC------c--------------------------
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG------L-------------------------- 115 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG------l-------------------------- 115 (221)
....+|||+|||+|.++..++..++. +|+++|.+ .|++.+.++. +
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~~--~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSFQ--DITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTEE--EEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhhc--ceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 35678999999999888877777643 68999987 5888776531 0
Q ss_pred ---c--ceeccccc--cCCCCC-CccCeeeecccccccc---ccHHHHHHHhhhhccCCeEEEEEcChh-----------
Q 027609 116 ---F--GLYHDWCE--SFNTYP-RTYDLLHADHLFSTIK---KSLKAVVAEVDRILRPDGNLILRDDAE----------- 173 (221)
Q Consensus 116 ---~--~~~~d~~e--~f~~yp-~sFDlVh~~~v~~h~~---~d~~~vL~EmdRVLRPGG~~ii~d~~~----------- 173 (221)
+ -...|..+ ++.+.+ .+||+|.|+.+++|.. +++..+|.++.|+|||||+|++++...
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~ 211 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREF 211 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEE
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEe
Confidence 0 01223322 122233 7999999999999862 277899999999999999999995211
Q ss_pred -----hHHHHHHHHHhcCCeEE
Q 027609 174 -----TIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 174 -----~~~~i~~i~~~l~W~~~ 190 (221)
..+.+.+++.+-..++.
T Consensus 212 ~~~~~~~~~l~~~l~~aGF~i~ 233 (263)
T 2a14_A 212 SCVALEKGEVEQAVLDAGFDIE 233 (263)
T ss_dssp ECCCCCHHHHHHHHHHTTEEEE
T ss_pred eccccCHHHHHHHHHHCCCEEE
Confidence 25678888888777764
No 51
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.51 E-value=5.4e-14 Score=115.46 Aligned_cols=96 Identities=17% Similarity=0.286 Sum_probs=76.3
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC----c-------cce-eccccccCCCCC-CccCe
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG----L-------FGL-YHDWCESFNTYP-RTYDL 135 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG----l-------~~~-~~d~~e~f~~yp-~sFDl 135 (221)
...+|||+|||+|.++..|++++. +++++|.+ .+++.+.++. + +.. ..|. +.+ +++ ++||+
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~-~~~-~~~~~~~D~ 104 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGY---SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENA-SSL-SFHDSSFDF 104 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCT-TSC-CSCTTCEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecc-ccc-CCCCCceeE
Confidence 467899999999999999999864 57888886 5888888752 2 112 2232 223 355 99999
Q ss_pred eeeccccccccccHH---HHHHHhhhhccCCeEEEEEcC
Q 027609 136 LHADHLFSTIKKSLK---AVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 136 Vh~~~v~~h~~~d~~---~vL~EmdRVLRPGG~~ii~d~ 171 (221)
|.|..+++|+. ++. .+|.++.|+|||||.+++.+.
T Consensus 105 v~~~~~l~~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 105 AVMQAFLTSVP-DPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp EEEESCGGGCC-CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEcchhhcCC-CHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 99999999998 677 999999999999999999853
No 52
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.51 E-value=5e-14 Score=119.75 Aligned_cols=116 Identities=15% Similarity=0.189 Sum_probs=88.0
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc----eeccccccCCCCC-CccCeeee
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG----LYHDWCESFNTYP-RTYDLLHA 138 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~----~~~d~~e~f~~yp-~sFDlVh~ 138 (221)
....+|||+|||+|.++..|++++. .+++++|.+ .+++.+.++ |+.+ ...|+ +.+ +++ ++||+|+|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~-~~~~~~fD~i~~ 120 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGHVT--GQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSM-DDL-PFRNEELDLIWS 120 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTTCS--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSC-CCCTTCEEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhccC--CEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcCh-hhC-CCCCCCEEEEEE
Confidence 3578999999999999999999843 157888886 588877665 4422 23343 334 366 99999999
Q ss_pred ccccccccccHHHHHHHhhhhccCCeEEEEEcCh---------------------hhHHHHHHHHHhcCCeEE
Q 027609 139 DHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA---------------------ETIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 139 ~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~---------------------~~~~~i~~i~~~l~W~~~ 190 (221)
..+++|+ ++..+|.++.|+|||||++++.+.. ...+.+.+++.+-.++..
T Consensus 121 ~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v 191 (267)
T 3kkz_A 121 EGAIYNI--GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPV 191 (267)
T ss_dssp SSCGGGT--CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEE
T ss_pred cCCceec--CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEE
Confidence 9999988 6899999999999999999998642 014566677777777764
No 53
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.51 E-value=2.5e-14 Score=121.62 Aligned_cols=99 Identities=21% Similarity=0.307 Sum_probs=79.8
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCccce-eccccccCCCCC-CccCeeeecccccccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLFGL-YHDWCESFNTYP-RTYDLLHADHLFSTIK 146 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~~~-~~d~~e~f~~yp-~sFDlVh~~~v~~h~~ 146 (221)
...+|||+|||+|.++..|++++. +++++|.+ .+++.+.++..... ..|. +.+ +++ ++||+|.|..++.|+.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~d~-~~~-~~~~~~fD~v~~~~~~~~~~ 128 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF---EVVLVDPSKEMLEVAREKGVKNVVEAKA-EDL-PFPSGAFEAVLALGDVLSYV 128 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHHTCSCEEECCT-TSC-CSCTTCEEEEEECSSHHHHC
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC---eEEEEeCCHHHHHHHHhhcCCCEEECcH-HHC-CCCCCCEEEEEEcchhhhcc
Confidence 567999999999999999999864 57888986 59999988854222 2332 223 365 8999999998888885
Q ss_pred ccHHHHHHHhhhhccCCeEEEEEcChh
Q 027609 147 KSLKAVVAEVDRILRPDGNLILRDDAE 173 (221)
Q Consensus 147 ~d~~~vL~EmdRVLRPGG~~ii~d~~~ 173 (221)
.++..+|.|+.|+|||||.+++.....
T Consensus 129 ~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 129 ENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred ccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 589999999999999999999987654
No 54
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.51 E-value=1.9e-14 Score=120.64 Aligned_cols=95 Identities=17% Similarity=0.215 Sum_probs=77.2
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC---ccc---eeccccccCCCCC-CccCeeeecc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG---LFG---LYHDWCESFNTYP-RTYDLLHADH 140 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG---l~~---~~~d~~e~f~~yp-~sFDlVh~~~ 140 (221)
....+|||+|||+|.++..|++++. +++++|.+ .+++.+.++- ..+ ...|. +.+ +++ ++||+|+|..
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~-~~~~~~fD~v~~~~ 112 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGY---RYIALDADAAMLEVFRQKIAGVDRKVQVVQADA-RAI-PLPDESVHGVIVVH 112 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTC---EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT-TSC-CSCTTCEEEEEEES
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCC---EEEEEECCHHHHHHHHHHhhccCCceEEEEccc-ccC-CCCCCCeeEEEECC
Confidence 3467999999999999999999864 57888886 5999888872 111 23343 333 366 8999999999
Q ss_pred ccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 141 LFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
+++|+. |+..+|.|+.|+|||||++++.
T Consensus 113 ~l~~~~-~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 113 LWHLVP-DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CGGGCT-THHHHHHHHHHHEEEEEEEEEE
T ss_pred chhhcC-CHHHHHHHHHHHCCCCcEEEEE
Confidence 999998 8999999999999999999987
No 55
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.51 E-value=1e-13 Score=113.82 Aligned_cols=121 Identities=14% Similarity=0.094 Sum_probs=89.8
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHcCccceeccccccCCCCC-CccCeeeeccccccccc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYP-RTYDLLHADHLFSTIKK 147 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eRGl~~~~~d~~e~f~~yp-~sFDlVh~~~v~~h~~~ 147 (221)
....+|||+|||+|.++..|. . +++++|.+.. .+.-...|. +.+ +++ ++||+|.|..+++ +.
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~---~---~v~~~D~s~~-------~~~~~~~d~-~~~-~~~~~~fD~v~~~~~l~-~~- 128 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR---N---PVHCFDLASL-------DPRVTVCDM-AQV-PLEDESVDVAVFCLSLM-GT- 128 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC---S---CEEEEESSCS-------STTEEESCT-TSC-SCCTTCEEEEEEESCCC-SS-
T ss_pred CCCCeEEEECCcCCHHHHHhh---c---cEEEEeCCCC-------CceEEEecc-ccC-CCCCCCEeEEEEehhcc-cc-
Confidence 346789999999999999984 1 3456665432 111123342 223 466 8999999999996 45
Q ss_pred cHHHHHHHhhhhccCCeEEEEEcChh---hHHHHHHHHHhcCCeEEEeec-CCCeeEEEEEec
Q 027609 148 SLKAVVAEVDRILRPDGNLILRDDAE---TIVEVEDLVKSLHWDVRMIYT-NDNQGMLCVHKT 206 (221)
Q Consensus 148 d~~~vL~EmdRVLRPGG~~ii~d~~~---~~~~i~~i~~~l~W~~~~~~~-~~~e~~l~~~K~ 206 (221)
++..+|.|+.|+|||||.+++.+... ..+.+.+++....+++...+. ...-.+++++|.
T Consensus 129 ~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k~ 191 (215)
T 2zfu_A 129 NIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDLTNSHFFLFDFQKT 191 (215)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEECCSTTCEEEEEEEC
T ss_pred CHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEecCCCeEEEEEEEec
Confidence 89999999999999999999998665 468889999999998765443 334578888886
No 56
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.51 E-value=8.4e-14 Score=116.05 Aligned_cols=116 Identities=17% Similarity=0.190 Sum_probs=89.9
Q ss_pred CeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCc-------cce-eccccccCCCCCCccCeeeecccc
Q 027609 72 RNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGL-------FGL-YHDWCESFNTYPRTYDLLHADHLF 142 (221)
Q Consensus 72 r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl-------~~~-~~d~~e~f~~yp~sFDlVh~~~v~ 142 (221)
.+|||+|||+|.++..|++.+. +++++|.+ .+++.+.++.- +.. ..|..+ ++ .+.+||+|.|..++
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~~l 142 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPER---FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFT-WR-PTELFDLIFDYVFF 142 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTE---EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTT-CC-CSSCEEEEEEESST
T ss_pred CCEEEeCCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhc-CC-CCCCeeEEEEChhh
Confidence 5999999999999999988753 57899986 58888877731 112 234322 22 23899999999999
Q ss_pred ccccc-cHHHHHHHhhhhccCCeEEEEEcChh-----------hHHHHHHHHHhcCCeEEEe
Q 027609 143 STIKK-SLKAVVAEVDRILRPDGNLILRDDAE-----------TIVEVEDLVKSLHWDVRMI 192 (221)
Q Consensus 143 ~h~~~-d~~~vL~EmdRVLRPGG~~ii~d~~~-----------~~~~i~~i~~~l~W~~~~~ 192 (221)
+|++. ++..+|.++.|+|||||++++.+... ..+.+.+++..-.|+....
T Consensus 143 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 143 CAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSV 204 (235)
T ss_dssp TTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEE
Confidence 99875 78999999999999999999874321 2578999999999987643
No 57
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.51 E-value=1.6e-14 Score=124.77 Aligned_cols=101 Identities=15% Similarity=0.129 Sum_probs=78.1
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc-cc-eeccccccCCCCCCccCeeeeccc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL-FG-LYHDWCESFNTYPRTYDLLHADHL 141 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl-~~-~~~d~~e~f~~yp~sFDlVh~~~v 141 (221)
.+..+|||+|||+|.++..|++.--...+++++|.+ .+++.+.++ +. +. ...|.. .+ +++++||+|+|..+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~-~~-~~~~~fD~v~~~~~ 98 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDAT-EI-ELNDKYDIAICHAF 98 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTT-TC-CCSSCEEEEEEESC
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchh-hc-CcCCCeeEEEECCh
Confidence 347899999999999999998871101256888886 588877765 11 11 233433 23 35799999999999
Q ss_pred cccccccHHHHHHHhhhhccCCeEEEEEcCh
Q 027609 142 FSTIKKSLKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 142 ~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
++|+. ++..+|.|+.|+|||||++++.+..
T Consensus 99 l~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 99 LLHMT-TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GGGCS-SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhcCC-CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 99998 8999999999999999999999866
No 58
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.50 E-value=1.9e-14 Score=122.47 Aligned_cols=98 Identities=14% Similarity=0.282 Sum_probs=77.2
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc---eeccccccCCCCC-CccCeeeec
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG---LYHDWCESFNTYP-RTYDLLHAD 139 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~---~~~d~~e~f~~yp-~sFDlVh~~ 139 (221)
....+|||+|||+|.++..|+++.-- .+++++|.+ .+++.+.++ |+.. ...|.. .+ +++ ++||+|+|.
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~-~~~~~~fD~v~~~ 112 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPD-AEITSIDISPESLEKARENTEKNGIKNVKFLQANIF-SL-PFEDSSFDHIFVC 112 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGG-GC-CSCTTCEEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccc-cC-CCCCCCeeEEEEe
Confidence 35789999999999999999887311 256888886 588877765 4432 223432 23 355 999999999
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEEc
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
.+++|+. ++..+|.++.|+|||||++++.+
T Consensus 113 ~~l~~~~-~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 113 FVLEHLQ-SPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp SCGGGCS-CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhhcC-CHHHHHHHHHHHcCCCcEEEEEE
Confidence 9999999 89999999999999999999986
No 59
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.50 E-value=1.3e-14 Score=123.20 Aligned_cols=99 Identities=16% Similarity=0.121 Sum_probs=74.4
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCcc-----c-eeccccccCCCCC-CccCeeeec-
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLF-----G-LYHDWCESFNTYP-RTYDLLHAD- 139 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~-----~-~~~d~~e~f~~yp-~sFDlVh~~- 139 (221)
....+|||+|||+|.++..|+++.. -+++.+|.+ ++++.|.++.-- . ...|+.+-..+++ ++||.|.+.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~ 136 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDT 136 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEee
Confidence 4578999999999999999988753 257888886 599988876421 1 2234433344566 889998754
Q ss_pred ----cccccccccHHHHHHHhhhhccCCeEEEEEc
Q 027609 140 ----HLFSTIKKSLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 140 ----~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
..+.|+. ++..++.|+.|||||||.|++.+
T Consensus 137 ~~~~~~~~~~~-~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 137 YPLSEETWHTH-QFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCCBGGGTTTH-HHHHHHHTHHHHEEEEEEEEECC
T ss_pred eecccchhhhc-chhhhhhhhhheeCCCCEEEEEe
Confidence 3445666 89999999999999999999864
No 60
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.50 E-value=3.7e-14 Score=117.52 Aligned_cols=110 Identities=21% Similarity=0.261 Sum_probs=87.0
Q ss_pred CCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCccceeccccccCCCCC-CccCeeeecccccccccc
Q 027609 71 VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLFGLYHDWCESFNTYP-RTYDLLHADHLFSTIKKS 148 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~d~~e~f~~yp-~sFDlVh~~~v~~h~~~d 148 (221)
..+|||+|||+|.++..|+.+ +++|.+ .+++.+.++++.-...|. +.+ +++ ++||+|.|..+++|+. +
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~~~~~~~~d~-~~~-~~~~~~fD~v~~~~~l~~~~-~ 117 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKRGVFVLKGTA-ENL-PLKDESFDFALMVTTICFVD-D 117 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHTTCEEEECBT-TBC-CSCTTCEEEEEEESCGGGSS-C
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhcCCEEEEccc-ccC-CCCCCCeeEEEEcchHhhcc-C
Confidence 679999999999999999776 566665 589999888543233443 333 355 8999999999999998 8
Q ss_pred HHHHHHHhhhhccCCeEEEEEcChh------------------------hHHHHHHHHHhcCCeEE
Q 027609 149 LKAVVAEVDRILRPDGNLILRDDAE------------------------TIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 149 ~~~vL~EmdRVLRPGG~~ii~d~~~------------------------~~~~i~~i~~~l~W~~~ 190 (221)
+..+|.++.|+|||||++++.+... ..+++.+++....++..
T Consensus 118 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~ 183 (219)
T 1vlm_A 118 PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEF 183 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEE
Confidence 9999999999999999999985321 24677788888888764
No 61
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.50 E-value=3.4e-14 Score=122.56 Aligned_cols=118 Identities=15% Similarity=0.119 Sum_probs=83.0
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC------------------ccc-------------
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG------------------LFG------------- 117 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG------------------l~~------------- 117 (221)
...+|||+|||+|.++..++..+.. +|+++|.+ .|++.+.++- +.+
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFE--DITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCS--EEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCC--eEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 5689999999999954434332222 67999987 5888776631 001
Q ss_pred ------eeccccccCC----CCC-CccCeeeecccccc----ccccHHHHHHHhhhhccCCeEEEEEcCh----------
Q 027609 118 ------LYHDWCESFN----TYP-RTYDLLHADHLFST----IKKSLKAVVAEVDRILRPDGNLILRDDA---------- 172 (221)
Q Consensus 118 ------~~~d~~e~f~----~yp-~sFDlVh~~~v~~h----~~~d~~~vL~EmdRVLRPGG~~ii~d~~---------- 172 (221)
...|..+.++ .++ ++||+|.|+.+|+| .. ++..+|.|+.|+|||||+|++.+..
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~-~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~ 227 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLA-SFQRALDHITTLLRPGGHLLLIGALEESWYLAGEA 227 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHH-HHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTE
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHH-HHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCe
Confidence 0114332122 144 78999999999998 44 7999999999999999999997311
Q ss_pred ------hhHHHHHHHHHhcCCeEE
Q 027609 173 ------ETIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 173 ------~~~~~i~~i~~~l~W~~~ 190 (221)
...+.+.+++..-.++..
T Consensus 228 ~~~~~~~~~~~l~~~l~~aGf~~~ 251 (289)
T 2g72_A 228 RLTVVPVSEEEVREALVRSGYKVR 251 (289)
T ss_dssp EEECCCCCHHHHHHHHHHTTEEEE
T ss_pred eeeeccCCHHHHHHHHHHcCCeEE
Confidence 136788888888888764
No 62
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.49 E-value=1.9e-13 Score=113.19 Aligned_cols=93 Identities=18% Similarity=0.291 Sum_probs=72.5
Q ss_pred CCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC----c-cce-eccccccCCCCCCccCeeeecc-cc
Q 027609 71 VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG----L-FGL-YHDWCESFNTYPRTYDLLHADH-LF 142 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG----l-~~~-~~d~~e~f~~yp~sFDlVh~~~-v~ 142 (221)
..+|||+|||+|.++..|+++ .+++++|.+ .+++.+.++. . +.. ..|..+ + +++++||+|.|.. ++
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~-~~~~~fD~v~~~~~~~ 107 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRE-L-ELPEPVDAITILCDSL 107 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGG-C-CCSSCEEEEEECTTGG
T ss_pred CCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhh-c-CCCCCcCEEEEeCCch
Confidence 479999999999999999887 267889986 5888887762 1 122 234322 2 3458999999986 89
Q ss_pred ccccc--cHHHHHHHhhhhccCCeEEEEE
Q 027609 143 STIKK--SLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 143 ~h~~~--d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
+|+.+ ++..+|.++.|+|||||.+++.
T Consensus 108 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 108 NYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp GGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 98842 7889999999999999999985
No 63
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.48 E-value=1.1e-13 Score=118.80 Aligned_cols=116 Identities=15% Similarity=0.233 Sum_probs=86.1
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc-cc-eeccccccCCCCCCccCeeeecccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL-FG-LYHDWCESFNTYPRTYDLLHADHLF 142 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl-~~-~~~d~~e~f~~yp~sFDlVh~~~v~ 142 (221)
...+|||+|||+|.++..|++++. +++++|.+ .+++.+.++ |+ +. ...|..+ ++ ++++||+|.|..+|
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~-~~~~fD~i~~~~~~ 194 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY---DVTSWDHNENSIAFLNETKEKENLNISTALYDINA-AN-IQENYDFIVSTVVF 194 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGG-CC-CCSCEEEEEECSSG
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHHcCCceEEEEecccc-cc-ccCCccEEEEccch
Confidence 578999999999999999999975 57888886 478776665 33 11 2234322 32 36999999999999
Q ss_pred ccccc-cHHHHHHHhhhhccCCeEEEEEcCh--------------hhHHHHHHHHHhcCCeEEEe
Q 027609 143 STIKK-SLKAVVAEVDRILRPDGNLILRDDA--------------ETIVEVEDLVKSLHWDVRMI 192 (221)
Q Consensus 143 ~h~~~-d~~~vL~EmdRVLRPGG~~ii~d~~--------------~~~~~i~~i~~~l~W~~~~~ 192 (221)
+|+.. +...+|.++.|+|||||.+++.... ...+++.+++.. |++...
T Consensus 195 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~ 257 (286)
T 3m70_A 195 MFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEY 257 (286)
T ss_dssp GGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred hhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEE
Confidence 99864 6779999999999999997775321 114567777766 887644
No 64
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.48 E-value=3.1e-14 Score=119.48 Aligned_cols=116 Identities=15% Similarity=0.176 Sum_probs=87.9
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc---e-eccccccCCCCC-CccCeeeec
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG---L-YHDWCESFNTYP-RTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~---~-~~d~~e~f~~yp-~sFDlVh~~ 139 (221)
...+|||+|||+|.++..|+++... +++++|.+ .+++.+.++ |+.+ . ..|. +.+ +++ ++||+|+|.
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~-~~~~~~fD~v~~~ 121 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADYVKG--QITGIDLFPDFIEIFNENAVKANCADRVKGITGSM-DNL-PFQNEELDLIWSE 121 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHCCS--EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSC-SSCTTCEEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-hhC-CCCCCCEEEEEec
Confidence 4669999999999999999987432 67888886 488876665 4422 2 3343 334 366 999999999
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEEcCh---------------------hhHHHHHHHHHhcCCeEEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA---------------------ETIVEVEDLVKSLHWDVRM 191 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~---------------------~~~~~i~~i~~~l~W~~~~ 191 (221)
.+++|+ ++..+|.|+.|+|||||++++.+.. ...+.+.+++..-.++...
T Consensus 122 ~~l~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 192 (257)
T 3f4k_A 122 GAIYNI--GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTA 192 (257)
T ss_dssp SCSCCC--CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEE
T ss_pred ChHhhc--CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEE
Confidence 999987 5899999999999999999999731 1235667777777777643
No 65
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.47 E-value=2.3e-14 Score=129.93 Aligned_cols=118 Identities=16% Similarity=0.159 Sum_probs=90.6
Q ss_pred CCCCeEEeecCcchHHHHHHhhC--CCeEEEeccCCCC-CCHHHHHHc---------C-c----cce-eccccccCC---
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDL--KVWVMNVVPIESP-DTLPIIYER---------G-L----FGL-YHDWCESFN--- 127 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~--~v~vmnv~~~d~~-~~l~~a~eR---------G-l----~~~-~~d~~e~f~--- 127 (221)
....+|||+|||+|.++..|++. +- .+++++|.+ .+++.+.++ | + +.. ..|.. .+.
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~-~l~~~~ 158 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEH--GKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIE-NLATAE 158 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTT--CEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTT-CGGGCB
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHH-Hhhhcc
Confidence 35779999999999999998875 22 257889986 599988887 5 2 112 23432 221
Q ss_pred --CCC-CccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEEcCh-----------------------hhHHHHHHH
Q 027609 128 --TYP-RTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA-----------------------ETIVEVEDL 181 (221)
Q Consensus 128 --~yp-~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~-----------------------~~~~~i~~i 181 (221)
+++ ++||+|+|+.+++|+. ++..+|.|+.|+|||||++++.+.. ...+.+.++
T Consensus 159 ~~~~~~~~fD~V~~~~~l~~~~-d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 237 (383)
T 4fsd_A 159 PEGVPDSSVDIVISNCVCNLST-NKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRL 237 (383)
T ss_dssp SCCCCTTCEEEEEEESCGGGCS-CHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHH
T ss_pred cCCCCCCCEEEEEEccchhcCC-CHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHH
Confidence 566 8999999999999998 8999999999999999999998632 113778888
Q ss_pred HHhcCCeEE
Q 027609 182 VKSLHWDVR 190 (221)
Q Consensus 182 ~~~l~W~~~ 190 (221)
+.+-.++..
T Consensus 238 l~~aGF~~v 246 (383)
T 4fsd_A 238 VAEAGFRDV 246 (383)
T ss_dssp HHHTTCCCE
T ss_pred HHHCCCceE
Confidence 888888643
No 66
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.47 E-value=3e-13 Score=119.24 Aligned_cols=135 Identities=15% Similarity=0.229 Sum_probs=95.7
Q ss_pred CCCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHc----Cccc----eeccccccCCCCCCccCeee
Q 027609 66 INWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYER----GLFG----LYHDWCESFNTYPRTYDLLH 137 (221)
Q Consensus 66 i~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eR----Gl~~----~~~d~~e~f~~yp~sFDlVh 137 (221)
+......+|||+|||+|.++..|+++.-. ..++.+|.+.+++.+.++ |+.+ ..+|. +.++|.+||+|.
T Consensus 165 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~p~~~D~v~ 240 (332)
T 3i53_A 165 YDWAALGHVVDVGGGSGGLLSALLTAHED-LSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSF---FDPLPAGAGGYV 240 (332)
T ss_dssp SCCGGGSEEEEETCTTSHHHHHHHHHCTT-CEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCT---TSCCCCSCSEEE
T ss_pred CCCCCCCEEEEeCCChhHHHHHHHHHCCC-CeEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCC---CCCCCCCCcEEE
Confidence 44456789999999999999999875211 135666776677777654 4422 23343 245666999999
Q ss_pred eccccccccc-cHHHHHHHhhhhccCCeEEEEEcChh----------------------hHHHHHHHHHhcCCeEEEee-
Q 027609 138 ADHLFSTIKK-SLKAVVAEVDRILRPDGNLILRDDAE----------------------TIVEVEDLVKSLHWDVRMIY- 193 (221)
Q Consensus 138 ~~~v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~d~~~----------------------~~~~i~~i~~~l~W~~~~~~- 193 (221)
|..+++|+.+ +...+|.++.|+|||||++++.|... ..+++++++++-.++..-..
T Consensus 241 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 320 (332)
T 3i53_A 241 LSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHP 320 (332)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred EehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEE
Confidence 9999999993 24899999999999999999987420 14567777777788765332
Q ss_pred cCCCeeEEEEEe
Q 027609 194 TNDNQGMLCVHK 205 (221)
Q Consensus 194 ~~~~e~~l~~~K 205 (221)
... ..++.|+|
T Consensus 321 ~~~-~~vie~r~ 331 (332)
T 3i53_A 321 ISY-VSIVEMTA 331 (332)
T ss_dssp CSS-SEEEEEEE
T ss_pred CCC-cEEEEEee
Confidence 223 66777765
No 67
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.47 E-value=1.8e-13 Score=111.77 Aligned_cols=124 Identities=18% Similarity=0.242 Sum_probs=90.6
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc--ee-ccccccCCCC-CCccCeeeecc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG--LY-HDWCESFNTY-PRTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~~-~d~~e~f~~y-p~sFDlVh~~~ 140 (221)
...+|||+|||+|.++..|++.+.. +++++|.+ .+++.+.++ |+.+ .+ .| +..+ +++||+|.|+.
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d----~~~~~~~~fD~i~~~~ 133 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKLGAK--SVLATDISDESMTAAEENAALNGIYDIALQKTS----LLADVDGKFDLIVANI 133 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCCCCEEEESS----TTTTCCSCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEecc----ccccCCCCceEEEECC
Confidence 3679999999999999999988642 57888886 588877775 4432 22 23 2234 49999999997
Q ss_pred ccccccccHHHHHHHhhhhccCCeEEEEEcCh-hhHHHHHHHHHhcCCeEEEeecCCCeeEEEE
Q 027609 141 LFSTIKKSLKAVVAEVDRILRPDGNLILRDDA-ETIVEVEDLVKSLHWDVRMIYTNDNQGMLCV 203 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~-~~~~~i~~i~~~l~W~~~~~~~~~~e~~l~~ 203 (221)
.+++ ...++.++.|+|||||++++.+.. ...+.+.+++....++.......+.=..++.
T Consensus 134 ~~~~----~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~~w~~~~~ 193 (205)
T 3grz_A 134 LAEI----LLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLKMRAGRWIGLAI 193 (205)
T ss_dssp CHHH----HHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEEEEETTEEEEEE
T ss_pred cHHH----HHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEeeccCCEEEEEE
Confidence 7764 468999999999999999998543 3477888888888888765443333333333
No 68
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.45 E-value=7.1e-14 Score=120.91 Aligned_cols=117 Identities=10% Similarity=-0.001 Sum_probs=86.3
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC-c--------------------cc---eeccccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG-L--------------------FG---LYHDWCE 124 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG-l--------------------~~---~~~d~~e 124 (221)
...+|||+|||+|.++..|+++|. +|+++|.+ .+++.+.++- + .. ...|..+
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~---~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGH---TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTC---EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCC---eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 467899999999999999999975 57999997 5999887652 1 11 1234322
Q ss_pred cCCCCC-CccCeeeeccccccccc-cHHHHHHHhhhhccCCeEEEEEcC---------h---hhHHHHHHHHHhcCCeEE
Q 027609 125 SFNTYP-RTYDLLHADHLFSTIKK-SLKAVVAEVDRILRPDGNLILRDD---------A---ETIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 125 ~f~~yp-~sFDlVh~~~v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~d~---------~---~~~~~i~~i~~~l~W~~~ 190 (221)
+++-+ ++||+|.+..+|+|++. +...++.|+.|+|||||.+++.+. . -..+++.+++.. .|++.
T Consensus 145 -l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~ 222 (252)
T 2gb4_A 145 -LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQ 222 (252)
T ss_dssp -GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEE
T ss_pred -CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEE
Confidence 32222 89999999999998875 677899999999999999964321 1 125778888776 48765
Q ss_pred E
Q 027609 191 M 191 (221)
Q Consensus 191 ~ 191 (221)
.
T Consensus 223 ~ 223 (252)
T 2gb4_A 223 C 223 (252)
T ss_dssp E
T ss_pred E
Confidence 3
No 69
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.45 E-value=1.6e-13 Score=112.54 Aligned_cols=96 Identities=24% Similarity=0.353 Sum_probs=74.6
Q ss_pred CCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC-----ccc-eeccccccCCCCC-CccCeeeecccc
Q 027609 71 VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG-----LFG-LYHDWCESFNTYP-RTYDLLHADHLF 142 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG-----l~~-~~~d~~e~f~~yp-~sFDlVh~~~v~ 142 (221)
..+|||+|||+|.++..|++++. +++++|.+ .+++.+.++. -+. ...|..+ + +++ ++||+|.|+.++
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~-~~~~~~~D~v~~~~~~ 113 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK-L-SFEDKTFDYVIFIDSI 113 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS-C-CSCTTCEEEEEEESCG
T ss_pred CCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhc-C-CCCCCcEEEEEEcCch
Confidence 67999999999999999999865 67888886 5888777652 122 2334322 2 355 899999999984
Q ss_pred c--cccccHHHHHHHhhhhccCCeEEEEEcCh
Q 027609 143 S--TIKKSLKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 143 ~--h~~~d~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
+ |.. ++..+|.++.|+|||||.+++.+..
T Consensus 114 ~~~~~~-~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 114 VHFEPL-ELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp GGCCHH-HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HhCCHH-HHHHHHHHHHHHcCCCcEEEEEecC
Confidence 4 444 7899999999999999999999765
No 70
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.45 E-value=1.5e-13 Score=120.59 Aligned_cols=99 Identities=9% Similarity=0.006 Sum_probs=77.1
Q ss_pred CCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCccc-eeccccccCC-----CCCCccCeeeecc
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLFG-LYHDWCESFN-----TYPRTYDLLHADH 140 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~~-~~~d~~e~f~-----~yp~sFDlVh~~~ 140 (221)
.....+|||+|||+|.++..|++++. .|+++|.+ .|++.+.++.-.. ...++.+ +. ..+++||+|.|+.
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~g~---~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~-~~~~~~~~~~~~fD~Vv~~~ 118 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALERGA---SVTVFDFSQRMCDDLAEALADRCVTIDLLD-ITAEIPKELAGHFDFVLNDR 118 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTSSSCCEEEECC-TTSCCCGGGTTCCSEEEEES
T ss_pred CCCcCEEEEEeCcchHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHhccceeeeee-cccccccccCCCccEEEEhh
Confidence 34478999999999999999999875 47899987 5999999884221 2223322 21 1247999999999
Q ss_pred ccccccc-cHHHHHHHhhhhccCCeEEEEEcC
Q 027609 141 LFSTIKK-SLKAVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 141 v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~d~ 171 (221)
+++|+.. +...+|.+|.|+| |||.++++-.
T Consensus 119 ~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 119 LINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred hhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 9999864 6778999999999 9999999954
No 71
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.45 E-value=3.8e-14 Score=125.59 Aligned_cols=101 Identities=10% Similarity=0.068 Sum_probs=73.8
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC----cc--------ce-ecccc-----ccCC-CC
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG----LF--------GL-YHDWC-----ESFN-TY 129 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG----l~--------~~-~~d~~-----e~f~-~y 129 (221)
...+|||+|||+|+.+..++..+.. +|+++|.+ .|++.|.+|- +. .. ..|.+ +.++ ++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~--~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIA--LLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCC--eEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 3678999999999877666665533 57999997 5999998872 10 01 12210 2221 35
Q ss_pred C-CccCeeeecccccccc--ccHHHHHHHhhhhccCCeEEEEEcCh
Q 027609 130 P-RTYDLLHADHLFSTIK--KSLKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 130 p-~sFDlVh~~~v~~h~~--~d~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
+ ++||+|.|..++++.. .+...+|.|+.|+|||||+|++++.+
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 6 9999999998887642 15689999999999999999999876
No 72
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.45 E-value=2.6e-13 Score=109.90 Aligned_cols=131 Identities=15% Similarity=0.189 Sum_probs=90.4
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCc----cc-eeccccccCCCCC-CccCeeeecccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGL----FG-LYHDWCESFNTYP-RTYDLLHADHLF 142 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl----~~-~~~d~~e~f~~yp-~sFDlVh~~~v~ 142 (221)
...+|||+|||+|.++..|++++.. +++++|.+ .+++.+.++.- +. ...|..+ + +++ ++||+|.|..++
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~-~-~~~~~~fD~v~~~~~~ 117 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRK-L-DFPSASFDVVLEKGTL 117 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTS-C-CSCSSCEEEEEEESHH
T ss_pred CCCeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhc-C-CCCCCcccEEEECcch
Confidence 3678999999999999999998643 57888886 58888887631 11 2334322 3 466 899999999888
Q ss_pred cccc--------------ccHHHHHHHhhhhccCCeEEEEEcChhhHHHHHHHH--HhcCCeEEEeecCC--CeeEEEEE
Q 027609 143 STIK--------------KSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLV--KSLHWDVRMIYTND--NQGMLCVH 204 (221)
Q Consensus 143 ~h~~--------------~d~~~vL~EmdRVLRPGG~~ii~d~~~~~~~i~~i~--~~l~W~~~~~~~~~--~e~~l~~~ 204 (221)
+|+. .++..+|.|+.|+|||||.+++.+....-- ...++ ....|......-.+ .--+.+++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (215)
T 2pxx_A 118 DALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPHF-RTRHYAQAYYGWSLRHATYGSGFHFHLYLMH 196 (215)
T ss_dssp HHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCHHH-HHHHHCCGGGCEEEEEEEESGGGCEEEEEEE
T ss_pred hhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCcHH-HHHHHhccccCcEEEEEEecCcceEEEEEEE
Confidence 7653 277999999999999999999998754211 22333 33467754322111 23456666
Q ss_pred e
Q 027609 205 K 205 (221)
Q Consensus 205 K 205 (221)
|
T Consensus 197 ~ 197 (215)
T 2pxx_A 197 K 197 (215)
T ss_dssp E
T ss_pred e
Confidence 5
No 73
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.44 E-value=3.1e-13 Score=119.59 Aligned_cols=138 Identities=12% Similarity=0.143 Sum_probs=98.1
Q ss_pred CCCCC-CCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHc----Cccc----eeccccccCCC-CCCccCe
Q 027609 66 INWSF-VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYER----GLFG----LYHDWCESFNT-YPRTYDL 135 (221)
Q Consensus 66 i~~~~-~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eR----Gl~~----~~~d~~e~f~~-yp~sFDl 135 (221)
+.... ..+|||+|||+|.++..|+++.-. ..++.+|.+.+++.+.++ |+.. ..+|..+ .++ .|..||+
T Consensus 174 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~D~ 251 (352)
T 3mcz_A 174 LGVFARARTVIDLAGGHGTYLAQVLRRHPQ-LTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLD-ARNFEGGAADV 251 (352)
T ss_dssp CGGGTTCCEEEEETCTTCHHHHHHHHHCTT-CEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTC-GGGGTTCCEEE
T ss_pred CCCcCCCCEEEEeCCCcCHHHHHHHHhCCC-CeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCccc-CcccCCCCccE
Confidence 44444 889999999999999999886211 245667776688776654 4422 2344322 111 4588999
Q ss_pred eeeccccccccc-cHHHHHHHhhhhccCCeEEEEEcCh-------h--------------------hHHHHHHHHHhcCC
Q 027609 136 LHADHLFSTIKK-SLKAVVAEVDRILRPDGNLILRDDA-------E--------------------TIVEVEDLVKSLHW 187 (221)
Q Consensus 136 Vh~~~v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~d~~-------~--------------------~~~~i~~i~~~l~W 187 (221)
|.|..+++|+.+ +...+|.++.|+|||||.+++.|.. + ..+++++++.+-.+
T Consensus 252 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 331 (352)
T 3mcz_A 252 VMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGL 331 (352)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTC
T ss_pred EEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCC
Confidence 999999999984 3489999999999999999998620 1 13456777777788
Q ss_pred eEEEeecCCCeeEEEEEec
Q 027609 188 DVRMIYTNDNQGMLCVHKT 206 (221)
Q Consensus 188 ~~~~~~~~~~e~~l~~~K~ 206 (221)
+... ...+...+++++|+
T Consensus 332 ~~~~-~~~g~~~l~~a~kp 349 (352)
T 3mcz_A 332 AVGE-RSIGRYTLLIGQRS 349 (352)
T ss_dssp EEEE-EEETTEEEEEEECC
T ss_pred ceee-eccCceEEEEEecC
Confidence 7654 23356788999985
No 74
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.44 E-value=4.6e-13 Score=119.23 Aligned_cols=137 Identities=23% Similarity=0.276 Sum_probs=96.3
Q ss_pred CCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHc----Cccc----eeccccccCCCCCCccCeeee
Q 027609 67 NWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYER----GLFG----LYHDWCESFNTYPRTYDLLHA 138 (221)
Q Consensus 67 ~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eR----Gl~~----~~~d~~e~f~~yp~sFDlVh~ 138 (221)
......+|||+|||+|.++..|+++.- ..+++.+|.+.+++.+.++ |+.+ ..+|. +.++|..||+|.|
T Consensus 179 ~~~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~D~v~~ 254 (374)
T 1qzz_A 179 DWSAVRHVLDVGGGNGGMLAAIALRAP-HLRGTLVELAGPAERARRRFADAGLADRVTVAEGDF---FKPLPVTADVVLL 254 (374)
T ss_dssp CCTTCCEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCT---TSCCSCCEEEEEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHCC-CCEEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCC---CCcCCCCCCEEEE
Confidence 345678999999999999999988631 1245777775588777664 4321 22343 2345656999999
Q ss_pred ccccccccccH--HHHHHHhhhhccCCeEEEEEcC--h--h-----------------------hHHHHHHHHHhcCCeE
Q 027609 139 DHLFSTIKKSL--KAVVAEVDRILRPDGNLILRDD--A--E-----------------------TIVEVEDLVKSLHWDV 189 (221)
Q Consensus 139 ~~v~~h~~~d~--~~vL~EmdRVLRPGG~~ii~d~--~--~-----------------------~~~~i~~i~~~l~W~~ 189 (221)
..+++|+. ++ ..+|.++.|+|||||++++.|. . + ..+++++++..-.++.
T Consensus 255 ~~vl~~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~ 333 (374)
T 1qzz_A 255 SFVLLNWS-DEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLAL 333 (374)
T ss_dssp ESCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEE
T ss_pred eccccCCC-HHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCce
Confidence 99999998 44 4899999999999999999876 2 1 2345667777778876
Q ss_pred EEe-ecCCCe-----eEEEEEeccc
Q 027609 190 RMI-YTNDNQ-----GMLCVHKTYW 208 (221)
Q Consensus 190 ~~~-~~~~~e-----~~l~~~K~~w 208 (221)
... ...... .++.|+|.=-
T Consensus 334 ~~~~~~~~~~~~~~~~~i~~~~~~~ 358 (374)
T 1qzz_A 334 ASERTSGSTTLPFDFSILEFTAVSE 358 (374)
T ss_dssp EEEEEECCSSCSSCEEEEEEEECC-
T ss_pred EEEEECCCCcccCCcEEEEEEECcc
Confidence 533 233334 7888988643
No 75
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.44 E-value=1.2e-13 Score=112.24 Aligned_cols=96 Identities=14% Similarity=0.138 Sum_probs=73.3
Q ss_pred CCeEEeecCcchHH-HHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc-cce-eccccccCCCCC-CccCeeeeccc
Q 027609 71 VRNVMDMRAVYGGF-AAALKDLKVWVMNVVPIESP-DTLPIIYER----GL-FGL-YHDWCESFNTYP-RTYDLLHADHL 141 (221)
Q Consensus 71 ~r~VLD~GcG~G~f-aa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl-~~~-~~d~~e~f~~yp-~sFDlVh~~~v 141 (221)
..+|||+|||+|.+ ...+...+. +++++|.+ .+++.+.++ |. +.. ..|. +.+ +++ ++||+|.|..+
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~-~~~~~~fD~v~~~~~ 98 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVEDGY---KTYGIEISDLQLKKAENFSRENNFKLNISKGDI-RKL-PFKDESMSFVYSYGT 98 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHTTC---EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCT-TSC-CSCTTCEEEEEECSC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEECch-hhC-CCCCCceeEEEEcCh
Confidence 57899999999998 455556554 57888886 588877765 21 222 2343 223 365 89999999999
Q ss_pred ccccc-ccHHHHHHHhhhhccCCeEEEEEcC
Q 027609 142 FSTIK-KSLKAVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 142 ~~h~~-~d~~~vL~EmdRVLRPGG~~ii~d~ 171 (221)
++|+. +++..+|.|+.|+|||||.+++.+.
T Consensus 99 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 99 IFHMRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 99984 2899999999999999999999864
No 76
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.44 E-value=1.1e-13 Score=119.92 Aligned_cols=94 Identities=10% Similarity=0.093 Sum_probs=72.6
Q ss_pred CCCCeEEeecCcchHHHHHHhh---CCCeEEEeccCCCC-CCHHHHHHc-----Cccc---e-eccccccCCCCC-----
Q 027609 69 SFVRNVMDMRAVYGGFAAALKD---LKVWVMNVVPIESP-DTLPIIYER-----GLFG---L-YHDWCESFNTYP----- 130 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~---~~v~vmnv~~~d~~-~~l~~a~eR-----Gl~~---~-~~d~~e~f~~yp----- 130 (221)
....+|||+|||+|.++..|++ .+. +++++|.+ .+++.+.++ |... . ..|. +.++.-+
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~~~ 110 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFE---QIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSS-DDFKFLGADSVD 110 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCS---EEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCT-TCCGGGCTTTTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCC---EEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCH-HhCCcccccccc
Confidence 4688999999999999999995 333 57889986 588888776 2211 2 2343 2232112
Q ss_pred -CccCeeeeccccccccccHHHHHHHhhhhccCCeEEEE
Q 027609 131 -RTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLIL 168 (221)
Q Consensus 131 -~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii 168 (221)
++||+|+|..+++|+ ++..+|.|+.|+|||||++++
T Consensus 111 ~~~fD~V~~~~~l~~~--~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 111 KQKIDMITAVECAHWF--DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp SSCEEEEEEESCGGGS--CHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCeeEEeHhhHHHHh--CHHHHHHHHHHhcCCCcEEEE
Confidence 699999999999988 799999999999999999998
No 77
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.44 E-value=4.9e-14 Score=118.25 Aligned_cols=100 Identities=13% Similarity=0.088 Sum_probs=73.0
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCc-----cce-eccccccCCCCC-CccCeeee-cc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGL-----FGL-YHDWCESFNTYP-RTYDLLHA-DH 140 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl-----~~~-~~d~~e~f~~yp-~sFDlVh~-~~ 140 (221)
...+|||+|||+|.++..|++.+.. +++++|.+ .|++.+.++.- +.. ..|+.+...+++ ++||+|+| ..
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPID--EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEE--EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCC--eEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 4678999999999999999876532 67899987 59998888641 112 234333223576 99999999 33
Q ss_pred cccccc---c-cHHHHHHHhhhhccCCeEEEEEcCh
Q 027609 141 LFSTIK---K-SLKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 141 v~~h~~---~-d~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
.+ +.+ . ++..++.|+.|+|||||++++.+..
T Consensus 138 ~~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 138 PL-SEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp CC-BGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred cc-chhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 32 222 1 5668899999999999999988643
No 78
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.44 E-value=5.5e-13 Score=105.48 Aligned_cols=116 Identities=16% Similarity=0.103 Sum_probs=85.1
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Ccc-c--eeccccccCCCCCCccCeeeecc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLF-G--LYHDWCESFNTYPRTYDLLHADH 140 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~-~--~~~d~~e~f~~yp~sFDlVh~~~ 140 (221)
....+|||+|||+|.++..|+++. ...+++++|.+ .+++.+.++ |+. . +..|..+.++..+++||+|.|+.
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~ 102 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGG 102 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECC
Confidence 346799999999999999998872 12367899986 488888765 443 1 22343343432238999999998
Q ss_pred ccccccccHHHHHHHhhhhccCCeEEEEEcCh-hhHHHHHHHHHhcCCeEE
Q 027609 141 LFSTIKKSLKAVVAEVDRILRPDGNLILRDDA-ETIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~-~~~~~i~~i~~~l~W~~~ 190 (221)
+++| ..++.++.|+|||||.+++.+.. +....+..+++....++.
T Consensus 103 ~~~~-----~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (178)
T 3hm2_A 103 GLTA-----PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTIS 148 (178)
T ss_dssp -TTC-----TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEE
T ss_pred cccH-----HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCeeE
Confidence 8876 57999999999999999998764 356667777777777654
No 79
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.43 E-value=8.5e-14 Score=116.46 Aligned_cols=98 Identities=12% Similarity=0.025 Sum_probs=75.3
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCcc-c---eeccccccCC---CCC--CccCeeeec
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLF-G---LYHDWCESFN---TYP--RTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~-~---~~~d~~e~f~---~yp--~sFDlVh~~ 139 (221)
...+|||+|||+|.++..|++++. +++++|.+ .+++.+.++.-. + ...|..+ ++ .|+ ..||+|.|+
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLV-PEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTC-HHHHHHHHHHHCSCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccc-cccccccccccCccEEEEc
Confidence 467899999999999999998865 57888886 599988887421 1 1223221 11 122 349999999
Q ss_pred cccccccc-cHHHHHHHhhhhccCCeEEEEEcC
Q 027609 140 HLFSTIKK-SLKAVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 140 ~v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~d~ 171 (221)
.+++|+.. ++..+|.|+.|+|||||++++.+.
T Consensus 132 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 132 TGFHHIPVEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp SSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred chhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 99998875 789999999999999999988864
No 80
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.43 E-value=1e-13 Score=112.56 Aligned_cols=110 Identities=15% Similarity=0.189 Sum_probs=81.8
Q ss_pred eEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc-cce-eccccccCCCCC-CccCeeeecccccc
Q 027609 73 NVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL-FGL-YHDWCESFNTYP-RTYDLLHADHLFST 144 (221)
Q Consensus 73 ~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl-~~~-~~d~~e~f~~yp-~sFDlVh~~~v~~h 144 (221)
+|||+|||+|.++..|++++. +++++|.+ .+++.+.++ |+ +.. ..|. +.+ +++ ++||+|.|. +.|
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~-~~~~~~fD~v~~~--~~~ 104 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY---EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNL-ADF-DIVADAWEGIVSI--FCH 104 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC---EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBT-TTB-SCCTTTCSEEEEE--CCC
T ss_pred CEEEECCCCCHhHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEEcCh-hhc-CCCcCCccEEEEE--hhc
Confidence 999999999999999999864 57888986 588877776 32 112 2342 223 356 899999995 455
Q ss_pred cc-ccHHHHHHHhhhhccCCeEEEEEcCh-----------------hhHHHHHHHHHhcCCeEEE
Q 027609 145 IK-KSLKAVVAEVDRILRPDGNLILRDDA-----------------ETIVEVEDLVKSLHWDVRM 191 (221)
Q Consensus 145 ~~-~d~~~vL~EmdRVLRPGG~~ii~d~~-----------------~~~~~i~~i~~~l~W~~~~ 191 (221)
+. .++..+|.++.|+|||||.+++.+.. ...+++.+++. .|++..
T Consensus 105 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~ 167 (202)
T 2kw5_A 105 LPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLI 167 (202)
T ss_dssp CCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEE
Confidence 54 28899999999999999999999521 12567777777 787653
No 81
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.43 E-value=1.1e-12 Score=117.18 Aligned_cols=131 Identities=12% Similarity=0.144 Sum_probs=91.6
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC--ccceeccccccCC--CCC-CccCeeeeccccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG--LFGLYHDWCESFN--TYP-RTYDLLHADHLFS 143 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG--l~~~~~d~~e~f~--~yp-~sFDlVh~~~v~~ 143 (221)
..++|||+|||+|+|+..|+++++. .|+++|.+ +||+.+.++- +...-..-...+. .+| .+||+|.|+.+|+
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~--~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~ 162 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAK--LVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFI 162 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCS--EEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSS
T ss_pred cccEEEecCCCccHHHHHHHhCCCC--EEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHh
Confidence 4789999999999999999998753 47899986 6998755431 1111000001111 246 5699999998887
Q ss_pred cccccHHHHHHHhhhhccCCeEEEEEcCh----------------------hhHHHHHHHHHhcCCeEEEee-c------
Q 027609 144 TIKKSLKAVVAEVDRILRPDGNLILRDDA----------------------ETIVEVEDLVKSLHWDVRMIY-T------ 194 (221)
Q Consensus 144 h~~~d~~~vL~EmdRVLRPGG~~ii~d~~----------------------~~~~~i~~i~~~l~W~~~~~~-~------ 194 (221)
++ ..+|.|+.|+|||||.+++...+ ...+++...+....|.+.-.. +
T Consensus 163 sl----~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi~g~~ 238 (291)
T 3hp7_A 163 SL----NLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPIQGGH 238 (291)
T ss_dssp CG----GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSSCCGG
T ss_pred hH----HHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
Confidence 54 58999999999999999987111 235778888899999976433 1
Q ss_pred CCCeeEEEEEec
Q 027609 195 NDNQGMLCVHKT 206 (221)
Q Consensus 195 ~~~e~~l~~~K~ 206 (221)
.+.|=++.++|.
T Consensus 239 gn~e~l~~~~~~ 250 (291)
T 3hp7_A 239 GNIEFLAHLEKT 250 (291)
T ss_dssp GCCCEEEEEEEC
T ss_pred cCHHHHHHhhhc
Confidence 235666667663
No 82
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.43 E-value=2e-13 Score=119.38 Aligned_cols=96 Identities=10% Similarity=0.032 Sum_probs=76.0
Q ss_pred CCCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHc----Cccc----eeccccccCCCCC-CccCee
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYER----GLFG----LYHDWCESFNTYP-RTYDLL 136 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eR----Gl~~----~~~d~~e~f~~yp-~sFDlV 136 (221)
.....+|||+|||+|.++..|+++ +. +++++|.+ .+++.+.++ |+.. ...|. +.+ +++ ++||+|
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~-~~~~~~fD~V 189 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGS---RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNM-LDT-PFDKGAVTAS 189 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSC-CCCTTCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh-hcC-CCCCCCEeEE
Confidence 345789999999999999999987 54 46888886 588877664 4421 22343 223 366 999999
Q ss_pred eeccccccccccHHHHHHHhhhhccCCeEEEEEc
Q 027609 137 HADHLFSTIKKSLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 137 h~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
.|..+++|+ ++..+|.|+.|+|||||++++.+
T Consensus 190 ~~~~~l~~~--~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 190 WNNESTMYV--DLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp EEESCGGGS--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCchhhC--CHHHHHHHHHHHcCCCcEEEEEE
Confidence 999999988 39999999999999999999986
No 83
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.42 E-value=1.8e-12 Score=113.98 Aligned_cols=135 Identities=14% Similarity=0.203 Sum_probs=94.9
Q ss_pred CCCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHc----Cc---cc-eeccccccCCCCCCccCeee
Q 027609 66 INWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYER----GL---FG-LYHDWCESFNTYPRTYDLLH 137 (221)
Q Consensus 66 i~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eR----Gl---~~-~~~d~~e~f~~yp~sFDlVh 137 (221)
+.... .+|||+|||+|.++..|+++.-. ..++.+|.+.+++.+.++ |+ +. ..+|. +.++|.+||+|.
T Consensus 164 ~~~~~-~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~D~v~ 238 (334)
T 2ip2_A 164 LDFRG-RSFVDVGGGSGELTKAILQAEPS-ARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDM---LQEVPSNGDIYL 238 (334)
T ss_dssp SCCTT-CEEEEETCTTCHHHHHHHHHCTT-CEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCT---TTCCCSSCSEEE
T ss_pred CCCCC-CEEEEeCCCchHHHHHHHHHCCC-CEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCC---CCCCCCCCCEEE
Confidence 33444 89999999999999999876211 246777776788888765 22 11 23443 335678899999
Q ss_pred eccccccccc-cHHHHHHHhhhhccCCeEEEEEcCh------h-------------------hHHHHHHHHHhcCCeEEE
Q 027609 138 ADHLFSTIKK-SLKAVVAEVDRILRPDGNLILRDDA------E-------------------TIVEVEDLVKSLHWDVRM 191 (221)
Q Consensus 138 ~~~v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~d~~------~-------------------~~~~i~~i~~~l~W~~~~ 191 (221)
|..+++||.+ +...+|.++.|+|||||++++.|.. + ..+++++++++-.++...
T Consensus 239 ~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 318 (334)
T 2ip2_A 239 LSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVER 318 (334)
T ss_dssp EESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEE
T ss_pred EchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeE
Confidence 9999999983 3349999999999999999998631 0 134556677777776543
Q ss_pred e-ecCCCeeEEEEEe
Q 027609 192 I-YTNDNQGMLCVHK 205 (221)
Q Consensus 192 ~-~~~~~e~~l~~~K 205 (221)
. .......++.|+|
T Consensus 319 ~~~~~~~~~~i~~~~ 333 (334)
T 2ip2_A 319 IVDLPMETRMIVAAR 333 (334)
T ss_dssp EEEETTTEEEEEEEE
T ss_pred EEECCCCCEEEEEEe
Confidence 2 2334567777776
No 84
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.42 E-value=1.1e-12 Score=107.28 Aligned_cols=117 Identities=15% Similarity=0.116 Sum_probs=86.4
Q ss_pred CCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc--e-eccccccCCCCCCccCeeeec
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG--L-YHDWCESFNTYPRTYDLLHAD 139 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~-~~d~~e~f~~yp~sFDlVh~~ 139 (221)
.....+|||+|||+|.++..|++++-. .+++++|.+ ++++.+.++ |+.. . ..|..+.++ ...+||+|.+.
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D~i~~~ 115 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLMPN-GRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD-DLPDPDRVFIG 115 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHCTT-SEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT-TSCCCSEEEES
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh-cCCCCCEEEEC
Confidence 344789999999999999999887511 257888886 588877765 4322 2 234323221 22789999998
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEEcCh-hhHHHHHHHHHhcCCeEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA-ETIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~-~~~~~i~~i~~~l~W~~~ 190 (221)
..+. ++..++.++.|+|||||.+++.+.. ...+.+.+.+++..|++.
T Consensus 116 ~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~~~~ 163 (204)
T 3e05_A 116 GSGG----MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVE 163 (204)
T ss_dssp CCTT----CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTCEEE
T ss_pred CCCc----CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCCcee
Confidence 7664 6789999999999999999999654 457778888888888654
No 85
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.42 E-value=8.2e-13 Score=117.22 Aligned_cols=137 Identities=20% Similarity=0.328 Sum_probs=96.2
Q ss_pred CCCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHc----Cccc----eeccccccCCCCCCccCeee
Q 027609 66 INWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYER----GLFG----LYHDWCESFNTYPRTYDLLH 137 (221)
Q Consensus 66 i~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eR----Gl~~----~~~d~~e~f~~yp~sFDlVh 137 (221)
+......+|||+|||+|.++..|+++.-. ..++.+|.+.+++.+.++ |+.+ ..+|. +.++|..||+|.
T Consensus 179 ~~~~~~~~vLDvG~G~G~~~~~l~~~~~~-~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~D~v~ 254 (360)
T 1tw3_A 179 YDWTNVRHVLDVGGGKGGFAAAIARRAPH-VSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDF---FEPLPRKADAII 254 (360)
T ss_dssp SCCTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCT---TSCCSSCEEEEE
T ss_pred CCCccCcEEEEeCCcCcHHHHHHHHhCCC-CEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCC---CCCCCCCccEEE
Confidence 34456789999999999999999886321 245667766688877664 3321 22343 234565699999
Q ss_pred eccccccccc-cHHHHHHHhhhhccCCeEEEEEcCh--h------------------------hHHHHHHHHHhcCCeEE
Q 027609 138 ADHLFSTIKK-SLKAVVAEVDRILRPDGNLILRDDA--E------------------------TIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 138 ~~~v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~d~~--~------------------------~~~~i~~i~~~l~W~~~ 190 (221)
|..+++|+.+ +...+|.++.|+|||||++++.|.. + ..+++++++++-.++..
T Consensus 255 ~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 334 (360)
T 1tw3_A 255 LSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVE 334 (360)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEE
T ss_pred EcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEE
Confidence 9999999983 2258999999999999999998754 1 13456677777778765
Q ss_pred Eee-cCCC-----eeEEEEEec
Q 027609 191 MIY-TNDN-----QGMLCVHKT 206 (221)
Q Consensus 191 ~~~-~~~~-----e~~l~~~K~ 206 (221)
... .... ..++.|+|+
T Consensus 335 ~~~~~~~~~~~~~~~~i~~~~~ 356 (360)
T 1tw3_A 335 EVRQLPSPTIPYDLSLLVLAPA 356 (360)
T ss_dssp EEEEEECSSSSCEEEEEEEEEC
T ss_pred EEEeCCCCcccCccEEEEEEeC
Confidence 332 2223 678888874
No 86
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.42 E-value=8.7e-13 Score=106.84 Aligned_cols=134 Identities=15% Similarity=0.154 Sum_probs=91.0
Q ss_pred CCeEEeecCcchHHHHHHhhC--CCeEEEeccCCCC-CCHHHHHHc----Cc---ccee-ccccccCCCCC-CccCeeee
Q 027609 71 VRNVMDMRAVYGGFAAALKDL--KVWVMNVVPIESP-DTLPIIYER----GL---FGLY-HDWCESFNTYP-RTYDLLHA 138 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~--~v~vmnv~~~d~~-~~l~~a~eR----Gl---~~~~-~d~~e~f~~yp-~sFDlVh~ 138 (221)
..+|||+|||+|.++..|+++ +.. +++++|.+ ++++.+.++ |+ +..+ .|. +.++.+. ++||+|.|
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENG--RVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGH-QNMDKYIDCPVKAVMF 99 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTC--EEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCG-GGGGGTCCSCEEEEEE
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH-HHHhhhccCCceEEEE
Confidence 568999999999999999886 221 57889986 588877665 33 2222 342 3344344 99999999
Q ss_pred cccccc-----c---cccHHHHHHHhhhhccCCeEEEEEcCh------hhHHHHHHHHHhcC---CeEEEee----cCCC
Q 027609 139 DHLFST-----I---KKSLKAVVAEVDRILRPDGNLILRDDA------ETIVEVEDLVKSLH---WDVRMIY----TNDN 197 (221)
Q Consensus 139 ~~v~~h-----~---~~d~~~vL~EmdRVLRPGG~~ii~d~~------~~~~~i~~i~~~l~---W~~~~~~----~~~~ 197 (221)
+..+.. . ..+...++.++.|+|||||++++.+.. ...+.+.+.+..+. |.+.... .+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~p 179 (197)
T 3eey_A 100 NLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQANCP 179 (197)
T ss_dssp EESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETTCCSCC
T ss_pred cCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEeccCccCC
Confidence 865510 1 115678999999999999999998522 23566666666655 7765443 2335
Q ss_pred eeEEEEEecc
Q 027609 198 QGMLCVHKTY 207 (221)
Q Consensus 198 e~~l~~~K~~ 207 (221)
..+++.+|.+
T Consensus 180 p~~~~~~~~~ 189 (197)
T 3eey_A 180 PILVCIEKIS 189 (197)
T ss_dssp CEEEEEEECC
T ss_pred CeEEEEEEcc
Confidence 6777777753
No 87
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.42 E-value=9e-13 Score=117.51 Aligned_cols=137 Identities=14% Similarity=0.217 Sum_probs=93.8
Q ss_pred CCCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHc----Cccc----eeccccccCCCCCCccCeee
Q 027609 66 INWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYER----GLFG----LYHDWCESFNTYPRTYDLLH 137 (221)
Q Consensus 66 i~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eR----Gl~~----~~~d~~e~f~~yp~sFDlVh 137 (221)
+......+|||+|||+|.++..|+++.- ..+++.+|.+.+++.+.++ |+.+ ..+|..+ . +++ .+|+|.
T Consensus 186 ~~~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~-~~~-~~D~v~ 261 (359)
T 1x19_A 186 AKLDGVKKMIDVGGGIGDISAAMLKHFP-ELDSTILNLPGAIDLVNENAAEKGVADRMRGIAVDIYK-E-SYP-EADAVL 261 (359)
T ss_dssp CCCTTCCEEEEESCTTCHHHHHHHHHCT-TCEEEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTT-S-CCC-CCSEEE
T ss_pred cCCCCCCEEEEECCcccHHHHHHHHHCC-CCeEEEEecHHHHHHHHHHHHhcCCCCCEEEEeCcccc-C-CCC-CCCEEE
Confidence 4455678999999999999999988621 1245777776688887765 5533 2234322 1 344 349999
Q ss_pred eccccccccc-cHHHHHHHhhhhccCCeEEEEEcCh----------------------------hhHHHHHHHHHhcCCe
Q 027609 138 ADHLFSTIKK-SLKAVVAEVDRILRPDGNLILRDDA----------------------------ETIVEVEDLVKSLHWD 188 (221)
Q Consensus 138 ~~~v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~d~~----------------------------~~~~~i~~i~~~l~W~ 188 (221)
+..+++|+.+ +...+|.++.|+|||||.+++.|.. ...+++++++++-.++
T Consensus 262 ~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~ 341 (359)
T 1x19_A 262 FCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYK 341 (359)
T ss_dssp EESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCE
T ss_pred EechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCc
Confidence 9999999983 4889999999999999999888611 1234556666666676
Q ss_pred EEEeecCCCeeEEEEEec
Q 027609 189 VRMIYTNDNQGMLCVHKT 206 (221)
Q Consensus 189 ~~~~~~~~~e~~l~~~K~ 206 (221)
......-....+++++|+
T Consensus 342 ~v~~~~~~~~~vi~a~kp 359 (359)
T 1x19_A 342 DVTMVRKYDHLLVQAVKP 359 (359)
T ss_dssp EEEEEEETTEEEEEEECC
T ss_pred eEEEEecCCceEEEEeCC
Confidence 543221115667777774
No 88
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.41 E-value=2.3e-13 Score=109.92 Aligned_cols=137 Identities=13% Similarity=0.084 Sum_probs=86.3
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc-cc-eeccccccCCC---CCCccCeeee
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL-FG-LYHDWCESFNT---YPRTYDLLHA 138 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl-~~-~~~d~~e~f~~---yp~sFDlVh~ 138 (221)
....+|||+|||+|.++..|+++.. ..+++++|.+ .+++.+.++ |+ +. ...|..+.++. ..++||+|.|
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 107 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVS 107 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEE
Confidence 4578999999999999999988732 1367888885 578777665 21 11 22344332221 1289999999
Q ss_pred cccccc------ccc-------------------cHHHHHHHhhhhccCCeE-EEEEcChhhHHHHHHHHH--hcCCeEE
Q 027609 139 DHLFST------IKK-------------------SLKAVVAEVDRILRPDGN-LILRDDAETIVEVEDLVK--SLHWDVR 190 (221)
Q Consensus 139 ~~v~~h------~~~-------------------d~~~vL~EmdRVLRPGG~-~ii~d~~~~~~~i~~i~~--~l~W~~~ 190 (221)
+--+.+ +.. ....++.++.|+|||||+ +++.-.....+.+.+++. .-.|...
T Consensus 108 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~~~gf~~~ 187 (215)
T 4dzr_A 108 NPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEVARLFAPWRERGFRV 187 (215)
T ss_dssp CCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCHHHHHHHTGGGGGGTEEC
T ss_pred CCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCccHHHHHHHHHHhhcCCceE
Confidence 644432 111 017899999999999999 676655566778888888 6777543
Q ss_pred --EeecCCCeeEEEEEec
Q 027609 191 --MIYTNDNQGMLCVHKT 206 (221)
Q Consensus 191 --~~~~~~~e~~l~~~K~ 206 (221)
..+..+.+++++++|.
T Consensus 188 ~~~~~~~~~~r~~~~~~~ 205 (215)
T 4dzr_A 188 RKVKDLRGIDRVIAVTRE 205 (215)
T ss_dssp CEEECTTSCEEEEEEEEC
T ss_pred EEEEecCCCEEEEEEEEc
Confidence 3345567899999874
No 89
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.41 E-value=1.3e-12 Score=108.23 Aligned_cols=133 Identities=12% Similarity=0.043 Sum_probs=93.1
Q ss_pred CCCeEEeecCc-chHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc-ccee-ccccccCCCCC-CccCeeeecc
Q 027609 70 FVRNVMDMRAV-YGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL-FGLY-HDWCESFNTYP-RTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~GcG-~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl-~~~~-~d~~e~f~~yp-~sFDlVh~~~ 140 (221)
...+|||+||| +|.++..|+++. ..+++++|.+ .+++.+.++ |+ +..+ .|+ +.+.+++ ++||+|.|+-
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~-~~~~~~~~~~fD~I~~np 131 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNG-GIIKGVVEGTFDVIFSAP 131 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS-CSSTTTCCSCEEEEEECC
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc-hhhhhcccCceeEEEECC
Confidence 46899999999 999999998872 1256888886 588777655 33 2222 342 2355566 9999999986
Q ss_pred ccccccc------------------cHHHHHHHhhhhccCCeEEEEEcC--hhhHHHHHHHHHhcCCeEEEeecCC---C
Q 027609 141 LFSTIKK------------------SLKAVVAEVDRILRPDGNLILRDD--AETIVEVEDLVKSLHWDVRMIYTND---N 197 (221)
Q Consensus 141 v~~h~~~------------------d~~~vL~EmdRVLRPGG~~ii~d~--~~~~~~i~~i~~~l~W~~~~~~~~~---~ 197 (221)
.+.+... ....++.++.|+|||||++++... ....+.+.+.++...|++....-.. -
T Consensus 132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~g~~~ 211 (230)
T 3evz_A 132 PYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDIKFKVGTRW 211 (230)
T ss_dssp CCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEEEECCCC-C
T ss_pred CCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEEEecCCCeE
Confidence 6654331 247899999999999999998543 3457888888999999876544222 3
Q ss_pred eeEEEEEe
Q 027609 198 QGMLCVHK 205 (221)
Q Consensus 198 e~~l~~~K 205 (221)
-.+|..+|
T Consensus 212 ~~~l~f~~ 219 (230)
T 3evz_A 212 RHSLIFFK 219 (230)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 45555555
No 90
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.41 E-value=2.1e-13 Score=122.55 Aligned_cols=101 Identities=10% Similarity=0.230 Sum_probs=75.9
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHc----Cccc----eeccccccCCCCCCccCeeeecc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYER----GLFG----LYHDWCESFNTYPRTYDLLHADH 140 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eR----Gl~~----~~~d~~e~f~~yp~sFDlVh~~~ 140 (221)
...++|||+|||+|.++..|+++.-. ..++.+|.+.+++.+.++ |+.+ ..+|..+.-.++|++||+|++..
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~ 256 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKE-VEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQ 256 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTT-CEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEES
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCC-CEEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEec
Confidence 45789999999999999999885211 146777776788887765 3322 23443221014678999999999
Q ss_pred ccccccc-cHHHHHHHhhhhccCCeEEEEEc
Q 027609 141 LFSTIKK-SLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 141 v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
+++||.+ +...+|.++.|+|||||.+++.|
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 257 FLDCFSEEEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp CSTTSCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999984 44688999999999999999976
No 91
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.40 E-value=2.2e-13 Score=116.14 Aligned_cols=100 Identities=16% Similarity=0.175 Sum_probs=76.2
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc---cce-eccccccCCCC-C-CccCeeee
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL---FGL-YHDWCESFNTY-P-RTYDLLHA 138 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl---~~~-~~d~~e~f~~y-p-~sFDlVh~ 138 (221)
...+|||+|||+|.++..|++.+.. +++++|.+ .+++.+.++ |+ +.. ..|.. .+ ++ + ++||+|.|
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~-~~~~~~~fD~v~~ 139 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAGIG--EYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSY-GR-HMDLGKEFDVISS 139 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHTCS--EEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTT-TS-CCCCSSCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcc-cc-ccCCCCCcCEEEE
Confidence 4679999999999999999887632 57888886 588887776 22 122 23432 22 34 4 89999999
Q ss_pred ccccccc--c-ccHHHHHHHhhhhccCCeEEEEEcChh
Q 027609 139 DHLFSTI--K-KSLKAVVAEVDRILRPDGNLILRDDAE 173 (221)
Q Consensus 139 ~~v~~h~--~-~d~~~vL~EmdRVLRPGG~~ii~d~~~ 173 (221)
..+++|. + .++..+|.|+.|+|||||++++.+...
T Consensus 140 ~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 140 QFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp ESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 9999762 1 288999999999999999999998663
No 92
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.39 E-value=8.8e-13 Score=113.59 Aligned_cols=131 Identities=11% Similarity=0.150 Sum_probs=96.4
Q ss_pred CCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHc----Cccc--e-eccccccCCCC-CCccCeeeec
Q 027609 70 FVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYER----GLFG--L-YHDWCESFNTY-PRTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~-~~d~~e~f~~y-p~sFDlVh~~ 139 (221)
...+|||+|||+|.++..|++. +.. +++++|.+ .+++.+.++ |+.. . ..|+.+ ++ +++||+|.|+
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~--~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~---~~~~~~fD~Iv~n 183 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDC--EIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFS---ALAGQQFAMIVSN 183 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTS--EEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTG---GGTTCCEEEEEEC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhh---hcccCCccEEEEC
Confidence 4568999999999999999864 322 57889986 588877765 4422 2 234433 34 4899999997
Q ss_pred c-------------cccccc-----------ccHHHHHHHhhhhccCCeEEEEEcChhhHHHHHHHHHhcCCeEE--Eee
Q 027609 140 H-------------LFSTIK-----------KSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVR--MIY 193 (221)
Q Consensus 140 ~-------------v~~h~~-----------~d~~~vL~EmdRVLRPGG~~ii~d~~~~~~~i~~i~~~l~W~~~--~~~ 193 (221)
- ++.|.+ .+...++.++.|+|||||++++.......+.+.++++...|+.. ..|
T Consensus 184 pPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~v~~~~d 263 (276)
T 2b3t_A 184 PPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRD 263 (276)
T ss_dssp CCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHHHTTCTTCCEEEC
T ss_pred CCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHHHCCCcEEEEEec
Confidence 3 333322 25678999999999999999999877778888888888888643 345
Q ss_pred cCCCeeEEEEEe
Q 027609 194 TNDNQGMLCVHK 205 (221)
Q Consensus 194 ~~~~e~~l~~~K 205 (221)
-.+.+++++++|
T Consensus 264 ~~g~~r~~~~~~ 275 (276)
T 2b3t_A 264 YGDNERVTLGRY 275 (276)
T ss_dssp TTSSEEEEEEEC
T ss_pred CCCCCcEEEEEE
Confidence 567899999875
No 93
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.39 E-value=1.9e-12 Score=116.60 Aligned_cols=135 Identities=19% Similarity=0.251 Sum_probs=97.9
Q ss_pred CCCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHc----Cccc----eeccccccCCCCCCccCeee
Q 027609 66 INWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYER----GLFG----LYHDWCESFNTYPRTYDLLH 137 (221)
Q Consensus 66 i~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eR----Gl~~----~~~d~~e~f~~yp~sFDlVh 137 (221)
+......+|||+|||+|.++..|+++.-. ..++.+|.+.+++.+.++ |+.+ ..+|. +.++|.+||+|.
T Consensus 198 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~---~~~~p~~~D~v~ 273 (369)
T 3gwz_A 198 YDFSGAATAVDIGGGRGSLMAAVLDAFPG-LRGTLLERPPVAEEARELLTGRGLADRCEILPGDF---FETIPDGADVYL 273 (369)
T ss_dssp SCCTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCT---TTCCCSSCSEEE
T ss_pred CCCccCcEEEEeCCCccHHHHHHHHHCCC-CeEEEEcCHHHHHHHHHhhhhcCcCCceEEeccCC---CCCCCCCceEEE
Confidence 44556899999999999999999886211 145777776677776654 4322 23443 345667899999
Q ss_pred eccccccccccHH--HHHHHhhhhccCCeEEEEEcCh------------------------hhHHHHHHHHHhcCCeEEE
Q 027609 138 ADHLFSTIKKSLK--AVVAEVDRILRPDGNLILRDDA------------------------ETIVEVEDLVKSLHWDVRM 191 (221)
Q Consensus 138 ~~~v~~h~~~d~~--~vL~EmdRVLRPGG~~ii~d~~------------------------~~~~~i~~i~~~l~W~~~~ 191 (221)
|..+++++. ++. .+|.++.|+|||||++++.|.. ...+++++++++-.++...
T Consensus 274 ~~~vlh~~~-d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~ 352 (369)
T 3gwz_A 274 IKHVLHDWD-DDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVER 352 (369)
T ss_dssp EESCGGGSC-HHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEE
T ss_pred hhhhhccCC-HHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEE
Confidence 999999998 554 7999999999999999997521 0145677888888888754
Q ss_pred ee--cCCCeeEEEEEe
Q 027609 192 IY--TNDNQGMLCVHK 205 (221)
Q Consensus 192 ~~--~~~~e~~l~~~K 205 (221)
.. ......++.|+|
T Consensus 353 ~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 353 SLPCGAGPVRIVEIRR 368 (369)
T ss_dssp EEECSSSSEEEEEEEE
T ss_pred EEECCCCCcEEEEEEe
Confidence 33 345677887776
No 94
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.39 E-value=9.3e-13 Score=111.67 Aligned_cols=101 Identities=13% Similarity=0.144 Sum_probs=71.9
Q ss_pred CCCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCCC-------CHHHHHHc----Cc---ccee-cc-ccccCCCCC
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESPD-------TLPIIYER----GL---FGLY-HD-WCESFNTYP 130 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~~-------~l~~a~eR----Gl---~~~~-~d-~~e~f~~yp 130 (221)
.....+|||+|||+|.++..|+++ +.. .+++++|.+. +++.+.++ |+ +... .| ....-.+|+
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~-~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 119 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSS-GHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIA 119 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTT-CEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCC-CEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCC
Confidence 345789999999999999999887 321 1467777753 78877665 22 1122 22 211122456
Q ss_pred -CccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEEc
Q 027609 131 -RTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 131 -~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
++||+|+|..+++|+. ++..++..+.++++|||++++.+
T Consensus 120 ~~~fD~v~~~~~l~~~~-~~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 120 DQHFDRVVLAHSLWYFA-SANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp TCCCSEEEEESCGGGSS-CHHHHHHHHHHHTTTCSEEEEEE
T ss_pred CCCEEEEEEccchhhCC-CHHHHHHHHHHHhCCCCEEEEEE
Confidence 8999999999999998 78876666677777799999975
No 95
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.39 E-value=5.5e-13 Score=106.65 Aligned_cols=128 Identities=15% Similarity=0.143 Sum_probs=89.7
Q ss_pred CCCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCc--cce-eccccccCCC--CC-CccCeeee
Q 027609 66 INWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGL--FGL-YHDWCESFNT--YP-RTYDLLHA 138 (221)
Q Consensus 66 i~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl--~~~-~~d~~e~f~~--yp-~sFDlVh~ 138 (221)
+.-....+|||+|||. +.+|.+ .|++.+.++.- +.. ..|. +.++. |+ ++||+|.|
T Consensus 8 ~g~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~-~~~~~~~~~~~~fD~V~~ 69 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGNEGRVSVENI-KQLLQSAHKESSFDIILS 69 (176)
T ss_dssp TTCCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEG-GGGGGGCCCSSCEEEEEE
T ss_pred cCCCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhcccCcEEEEech-hcCccccCCCCCEeEEEE
Confidence 3344578999999996 126654 58998888731 222 2342 33433 46 99999999
Q ss_pred ccccccc-cccHHHHHHHhhhhccCCeEEEEEcChh----------hHHHHHHHHHhcCCeEEEeecC------------
Q 027609 139 DHLFSTI-KKSLKAVVAEVDRILRPDGNLILRDDAE----------TIVEVEDLVKSLHWDVRMIYTN------------ 195 (221)
Q Consensus 139 ~~v~~h~-~~d~~~vL~EmdRVLRPGG~~ii~d~~~----------~~~~i~~i~~~l~W~~~~~~~~------------ 195 (221)
+.+++|+ . ++..+|.|+.|+|||||++++.+... ..+++.+.++.-.+ +.+....
T Consensus 70 ~~~l~~~~~-~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~~~~~~~~~~~~~~~~~~ 147 (176)
T 2ld4_A 70 GLVPGSTTL-HSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VEVKELQREPLTPEEVQSV 147 (176)
T ss_dssp CCSTTCCCC-CCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EEEEEEEEECCCHHHHHHH
T ss_pred CChhhhccc-CHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cEeecCcccCCCHHHHHHH
Confidence 9999998 6 89999999999999999999975421 15677777777777 4432200
Q ss_pred ------C-C---eeEEEEEecccCCCcc
Q 027609 196 ------D-N---QGMLCVHKTYWRPKET 213 (221)
Q Consensus 196 ------~-~---e~~l~~~K~~w~~~~~ 213 (221)
. . -.+++++|+-|..+++
T Consensus 148 ~~~~g~~~~~~~~~~~~a~Kp~~~~gs~ 175 (176)
T 2ld4_A 148 REHLGHESDNLLFVQITGKKPNFEVGSS 175 (176)
T ss_dssp HHHTCCCCSSEEEEEEEEECCCSSCCSC
T ss_pred HHHhcccCCceEEEEEeccCCcccccCC
Confidence 0 1 4578999998877664
No 96
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.39 E-value=2e-12 Score=108.33 Aligned_cols=96 Identities=18% Similarity=0.243 Sum_probs=65.5
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCC-C----HHHHHHcCcc-ceecccccc--CCCCCCccCeeeeccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPD-T----LPIIYERGLF-GLYHDWCES--FNTYPRTYDLLHADHL 141 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~-~----l~~a~eRGl~-~~~~d~~e~--f~~yp~sFDlVh~~~v 141 (221)
...+|||+|||+|.++..|+++.-. ..|+++|.+. | ++.+.++.-+ -...|..+. +.+++++||+|.|+ +
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~-~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~-~ 134 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDE-GIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQD-I 134 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTT-SEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEEC-C
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEe-c
Confidence 4678999999999999998876211 2578899863 4 4455544222 123343221 12355899999998 2
Q ss_pred cccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 142 FSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 142 ~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
..+ .+...+|.|+.|+|||||.+++.
T Consensus 135 ~~~--~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 135 AQK--NQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp CST--THHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCh--hHHHHHHHHHHHHhCCCCEEEEE
Confidence 222 24556799999999999999998
No 97
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.38 E-value=1.5e-12 Score=116.08 Aligned_cols=134 Identities=13% Similarity=0.204 Sum_probs=88.9
Q ss_pred CCCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHH--HHHcCccc----eeccccccCCCCCCccCeeeec
Q 027609 66 INWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPI--IYERGLFG----LYHDWCESFNTYPRTYDLLHAD 139 (221)
Q Consensus 66 i~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~--a~eRGl~~----~~~d~~e~f~~yp~sFDlVh~~ 139 (221)
+......+|||+|||+|.++..|+++.-. ..++.+|.+.++.. +.+.|+.+ ..+|. +.++| +||+|.+.
T Consensus 180 ~~~~~~~~vLDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~---~~~~p-~~D~v~~~ 254 (348)
T 3lst_A 180 GDFPATGTVADVGGGRGGFLLTVLREHPG-LQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDF---LREVP-HADVHVLK 254 (348)
T ss_dssp SCCCSSEEEEEETCTTSHHHHHHHHHCTT-EEEEEEECHHHHTTCCCCCGGGTTSEEEEECCT---TTCCC-CCSEEEEE
T ss_pred CCccCCceEEEECCccCHHHHHHHHHCCC-CEEEEecCHHHhhcccccccCCCCCeEEEecCC---CCCCC-CCcEEEEe
Confidence 44566889999999999999999885311 24566666543330 01113322 23342 34567 99999999
Q ss_pred cccccccccH--HHHHHHhhhhccCCeEEEEEcCh-------------------------hhHHHHHHHHHhcCCeEEEe
Q 027609 140 HLFSTIKKSL--KAVVAEVDRILRPDGNLILRDDA-------------------------ETIVEVEDLVKSLHWDVRMI 192 (221)
Q Consensus 140 ~v~~h~~~d~--~~vL~EmdRVLRPGG~~ii~d~~-------------------------~~~~~i~~i~~~l~W~~~~~ 192 (221)
.+++|+. ++ ..+|.|+.|+|||||.+++.|.. ...+++++++++-.++..-.
T Consensus 255 ~vlh~~~-d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 333 (348)
T 3lst_A 255 RILHNWG-DEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRV 333 (348)
T ss_dssp SCGGGSC-HHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred hhccCCC-HHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEE
Confidence 9999999 56 79999999999999999998631 01456677777777776433
Q ss_pred e-cCCCeeEEEEEe
Q 027609 193 Y-TNDNQGMLCVHK 205 (221)
Q Consensus 193 ~-~~~~e~~l~~~K 205 (221)
. ......++.+++
T Consensus 334 ~~~~~~~~vie~~p 347 (348)
T 3lst_A 334 VGTSSVMSIAVGVP 347 (348)
T ss_dssp EECSSSCEEEEEEE
T ss_pred EECCCCcEEEEEEe
Confidence 2 223344555543
No 98
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.38 E-value=1.1e-12 Score=109.97 Aligned_cols=99 Identities=20% Similarity=0.276 Sum_probs=73.5
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc-cc-eeccccccCCCCCCccCeeeecc-
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL-FG-LYHDWCESFNTYPRTYDLLHADH- 140 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl-~~-~~~d~~e~f~~yp~sFDlVh~~~- 140 (221)
....+|||+|||+|.++..|++++. +++++|.+ .+++.+.++ |+ +. ...|..+ + +++++||+|.|..
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~-~-~~~~~fD~v~~~~~ 114 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERGY---EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE-I-AFKNEFDAVTMFFS 114 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG-C-CCCSCEEEEEECSS
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhh-c-ccCCCccEEEEcCC
Confidence 4467999999999999999999875 57889986 588887765 22 12 2234322 3 3468999999863
Q ss_pred ccccccc-cHHHHHHHhhhhccCCeEEEEEcCh
Q 027609 141 LFSTIKK-SLKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 141 v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
.++|+.. ++..+|.++.|+|||||.+++....
T Consensus 115 ~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 115 TIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp GGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred chhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 4444432 7889999999999999999987543
No 99
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.38 E-value=2.4e-13 Score=118.60 Aligned_cols=101 Identities=17% Similarity=0.186 Sum_probs=74.7
Q ss_pred CCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHcCc-------------------------------
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYERGL------------------------------- 115 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eRGl------------------------------- 115 (221)
....+|||+|||+|.++..|+.+ +.. +++++|.+ .+++.|.++--
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~--~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPS--RMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRK 122 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCS--EEEEEESCHHHHHHHHHTC--------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCC--EEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccc
Confidence 36789999999999999999887 322 57899986 58888877621
Q ss_pred ---------------------------------cc-eecccccc---CCCCC-CccCeeeecccccccc----c-cHHHH
Q 027609 116 ---------------------------------FG-LYHDWCES---FNTYP-RTYDLLHADHLFSTIK----K-SLKAV 152 (221)
Q Consensus 116 ---------------------------------~~-~~~d~~e~---f~~yp-~sFDlVh~~~v~~h~~----~-d~~~v 152 (221)
+. ..+|+... +.+++ ++||+|.|..+++|++ . ++..+
T Consensus 123 ~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~ 202 (292)
T 3g07_A 123 RSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRM 202 (292)
T ss_dssp -------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred cccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHH
Confidence 11 11232210 11244 9999999999997653 2 78899
Q ss_pred HHHhhhhccCCeEEEEEcC
Q 027609 153 VAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 153 L~EmdRVLRPGG~~ii~d~ 171 (221)
|.++.|+|||||+|++...
T Consensus 203 l~~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 203 FRRIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHHHHEEEEEEEEEECC
T ss_pred HHHHHHHhCCCcEEEEecC
Confidence 9999999999999999743
No 100
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.37 E-value=1.8e-12 Score=100.59 Aligned_cols=129 Identities=12% Similarity=0.069 Sum_probs=83.1
Q ss_pred CCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCCCCHHHHHHcCccceeccccccCCC-------CC-CccCeeeecc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNT-------YP-RTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~~~l~~a~eRGl~~~~~d~~e~f~~-------yp-~sFDlVh~~~ 140 (221)
...+|||+|||+|.++..|+++ +.- .+++++|.+.+++. .+ +.-...|..+ ++. ++ ++||+|.|+.
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~-~~v~~~D~~~~~~~--~~-~~~~~~d~~~-~~~~~~~~~~~~~~~~D~i~~~~ 96 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGK-GRIIACDLLPMDPI--VG-VDFLQGDFRD-ELVMKALLERVGDSKVQVVMSDM 96 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTT-CEEEEEESSCCCCC--TT-EEEEESCTTS-HHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCC-CeEEEEECcccccc--Cc-EEEEEccccc-chhhhhhhccCCCCceeEEEECC
Confidence 3569999999999999999876 321 14566666544432 11 2112234322 110 55 8999999988
Q ss_pred ccccccccH-----------HHHHHHhhhhccCCeEEEEEcChh-hHHHHHHHHHhcCCeEEEee------cCCCeeEEE
Q 027609 141 LFSTIKKSL-----------KAVVAEVDRILRPDGNLILRDDAE-TIVEVEDLVKSLHWDVRMIY------TNDNQGMLC 202 (221)
Q Consensus 141 v~~h~~~d~-----------~~vL~EmdRVLRPGG~~ii~d~~~-~~~~i~~i~~~l~W~~~~~~------~~~~e~~l~ 202 (221)
.+++.. ++ ..+|.++.|+|||||.+++.+... ....+...+.. .|+..... ....|.+++
T Consensus 97 ~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 174 (180)
T 1ej0_A 97 APNMSG-TPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS-LFTKVKVRKPDSSRARSREVYIV 174 (180)
T ss_dssp CCCCCS-CHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHH-HEEEEEEECCTTSCTTCCEEEEE
T ss_pred CccccC-CCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHH-hhhhEEeecCCcccccCceEEEE
Confidence 877554 33 689999999999999999975432 34444444444 36553321 234688888
Q ss_pred EEe
Q 027609 203 VHK 205 (221)
Q Consensus 203 ~~K 205 (221)
|++
T Consensus 175 ~~~ 177 (180)
T 1ej0_A 175 ATG 177 (180)
T ss_dssp EEE
T ss_pred Ecc
Confidence 876
No 101
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.37 E-value=5.2e-12 Score=106.44 Aligned_cols=134 Identities=17% Similarity=0.247 Sum_probs=90.9
Q ss_pred CCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHc----Cccc--eeccccccCCC---CCCccCeeee
Q 027609 70 FVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYER----GLFG--LYHDWCESFNT---YPRTYDLLHA 138 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~~~d~~e~f~~---yp~sFDlVh~ 138 (221)
...+|||+|||+|.++..|+.. +. .+|+++|.+ ++++.+.++ |+.+ +++.-.+.++. .+++||+|.|
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPH--LHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTT--CEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEE
Confidence 4679999999999998888742 22 247888886 488777654 5422 33321233332 2489999999
Q ss_pred ccccccccccHHHHHHHhhhhccCCeEEEEEcCh---hhHHHHHHHHHhcCCeEEEee---c---CCCeeEEEEEecccC
Q 027609 139 DHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA---ETIVEVEDLVKSLHWDVRMIY---T---NDNQGMLCVHKTYWR 209 (221)
Q Consensus 139 ~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~---~~~~~i~~i~~~l~W~~~~~~---~---~~~e~~l~~~K~~w~ 209 (221)
..+ . ++..++.++.|+|||||++++.+.. +.+..+.+.++...++..... . +....+++++|.-..
T Consensus 148 ~~~----~-~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~k~~~~ 222 (240)
T 1xdz_A 148 RAV----A-RLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIEESDRNIMVIRKIKNT 222 (240)
T ss_dssp ECC----S-CHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEEEEECSCC
T ss_pred ecc----C-CHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEEEEEecCCC
Confidence 762 3 7889999999999999999998643 335556666777788764221 1 234567777776544
Q ss_pred C
Q 027609 210 P 210 (221)
Q Consensus 210 ~ 210 (221)
|
T Consensus 223 ~ 223 (240)
T 1xdz_A 223 P 223 (240)
T ss_dssp C
T ss_pred C
Confidence 4
No 102
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.36 E-value=1.5e-12 Score=111.76 Aligned_cols=126 Identities=17% Similarity=0.153 Sum_probs=92.6
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc-ccee-ccccccCCCCC-CccCeeeeccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL-FGLY-HDWCESFNTYP-RTYDLLHADHL 141 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl-~~~~-~d~~e~f~~yp-~sFDlVh~~~v 141 (221)
...+|||+|||+|.++..+++.+. +++++|.+ .+++.+.++ |+ +..+ .|+.+ .++ ++||+|.|+.+
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~---~~~~~~fD~Vv~n~~ 193 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA---ALPFGPFDLLVANLY 193 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH---HGGGCCEEEEEEECC
T ss_pred CCCEEEEecCCCcHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhh---cCcCCCCCEEEECCc
Confidence 367999999999999999999875 67888885 588877775 33 2222 23322 245 89999999855
Q ss_pred cccccccHHHHHHHhhhhccCCeEEEEEcCh-hhHHHHHHHHHhcCCeEEEeecCCCeeEEEEEe
Q 027609 142 FSTIKKSLKAVVAEVDRILRPDGNLILRDDA-ETIVEVEDLVKSLHWDVRMIYTNDNQGMLCVHK 205 (221)
Q Consensus 142 ~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~-~~~~~i~~i~~~l~W~~~~~~~~~~e~~l~~~K 205 (221)
.+ ....++.++.|+|||||++++++.. ...+.+.+.+++..++.......+.=..|+++|
T Consensus 194 ~~----~~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~~~~~~W~~l~~~k 254 (254)
T 2nxc_A 194 AE----LHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEAAEGEWVLLAYGR 254 (254)
T ss_dssp HH----HHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEEEEETTEEEEEEEC
T ss_pred HH----HHHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEEeccCCeEEEEEEC
Confidence 44 3468999999999999999998643 457888888888889876544444445555554
No 103
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.36 E-value=6.3e-13 Score=116.05 Aligned_cols=101 Identities=13% Similarity=0.100 Sum_probs=76.3
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC-----------c--cc-eeccccccCC---CCC-
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG-----------L--FG-LYHDWCESFN---TYP- 130 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG-----------l--~~-~~~d~~e~f~---~yp- 130 (221)
...+|||+|||+|.++..|++.+.. +++++|.+ .+++.+.++. . +. ...|. +.++ +|+
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~ 110 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRIN--KLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADS-SKELLIDKFRD 110 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCT-TTSCSTTTCSS
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCC--EEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecc-cccchhhhccc
Confidence 4679999999999999999886532 57889986 5888887762 1 11 23343 3333 252
Q ss_pred --CccCeeeeccccccc-cc--cHHHHHHHhhhhccCCeEEEEEcChh
Q 027609 131 --RTYDLLHADHLFSTI-KK--SLKAVVAEVDRILRPDGNLILRDDAE 173 (221)
Q Consensus 131 --~sFDlVh~~~v~~h~-~~--d~~~vL~EmdRVLRPGG~~ii~d~~~ 173 (221)
++||+|.|+.++++. .+ ++..+|.++.|+|||||+++++....
T Consensus 111 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 111 PQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp TTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 599999999999876 32 67899999999999999999998764
No 104
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.36 E-value=3.2e-12 Score=103.04 Aligned_cols=125 Identities=14% Similarity=0.118 Sum_probs=91.8
Q ss_pred CCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCccceeccccccCCCCC-CccCeeeeccccccccc-
Q 027609 71 VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLFGLYHDWCESFNTYP-RTYDLLHADHLFSTIKK- 147 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~d~~e~f~~yp-~sFDlVh~~~v~~h~~~- 147 (221)
..+|||+|||+|.++..|++++ +++++|.+ .+++. ...+.-...|.. .+++ ++||+|.|+..+++..+
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~--~~~~~~~~~d~~---~~~~~~~fD~i~~n~~~~~~~~~ 94 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES--HRGGNLVRADLL---CSINQESVDVVVFNPPYVPDTDD 94 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT--CSSSCEEECSTT---TTBCGGGCSEEEECCCCBTTCCC
T ss_pred CCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc--ccCCeEEECChh---hhcccCCCCEEEECCCCccCCcc
Confidence 5589999999999999999987 67999986 47765 222221334432 3456 99999999988875441
Q ss_pred -------cHHHHHHHhhhhccCCeEEEEEcCh-hhHHHHHHHHHhcCCeEEEee--cCCCeeEEEEEe
Q 027609 148 -------SLKAVVAEVDRILRPDGNLILRDDA-ETIVEVEDLVKSLHWDVRMIY--TNDNQGMLCVHK 205 (221)
Q Consensus 148 -------d~~~vL~EmdRVLRPGG~~ii~d~~-~~~~~i~~i~~~l~W~~~~~~--~~~~e~~l~~~K 205 (221)
+...++.++.|.| |||.+++.+.. ...+++.++++...|+..... ....|++++.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~~~~e~~~~~~~ 161 (170)
T 3q87_B 95 PIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRKILGETVYIIKG 161 (170)
T ss_dssp TTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEECSSSEEEEEEE
T ss_pred ccccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeeccCCceEEEEEE
Confidence 2467899999999 99999998644 457889999999999876443 344566666543
No 105
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.36 E-value=4.2e-13 Score=116.23 Aligned_cols=96 Identities=19% Similarity=0.279 Sum_probs=72.7
Q ss_pred CeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCc---------cce-eccccccCCCCCCccCeeeec-
Q 027609 72 RNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGL---------FGL-YHDWCESFNTYPRTYDLLHAD- 139 (221)
Q Consensus 72 r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl---------~~~-~~d~~e~f~~yp~sFDlVh~~- 139 (221)
.+|||+|||+|.++..|++++. +++++|.+ .+++.+.++.- +.. ..|.. .++ ++++||+|.|.
T Consensus 84 ~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~-~~~-~~~~fD~v~~~~ 158 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLDLGW---EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMS-AFA-LDKRFGTVVISS 158 (299)
T ss_dssp SCEEEETCTTTTTHHHHHTTTC---CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTT-BCC-CSCCEEEEEECH
T ss_pred CcEEEEeccCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchh-cCC-cCCCcCEEEECC
Confidence 3899999999999999999874 46888886 58888877621 122 33432 233 47999999976
Q ss_pred cccccccc-cHHHHHHHhhhhccCCeEEEEEcCh
Q 027609 140 HLFSTIKK-SLKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 140 ~v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
.+++|+.. +...+|.|+.|+|||||.+++.+..
T Consensus 159 ~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 159 GSINELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp HHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cccccCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 55555543 5689999999999999999998644
No 106
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.36 E-value=8.5e-12 Score=98.29 Aligned_cols=110 Identities=10% Similarity=0.125 Sum_probs=84.5
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc--e-eccccccCCCCC-CccCeeeecc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG--L-YHDWCESFNTYP-RTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~-~~d~~e~f~~yp-~sFDlVh~~~ 140 (221)
...+|||+|||+|.++..|++.+. +++++|.+ ++++.+.++ |+.. . ..|+.+ +++ ++||+|.|+.
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~---~~~~~~~D~i~~~~ 108 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAKRCK---FVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED---VLDKLEFNKAFIGG 108 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHTTSS---EEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH---HGGGCCCSEEEECS
T ss_pred CCCEEEEeCCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc---cccCCCCcEEEECC
Confidence 467999999999999999988433 56888876 588777765 4322 2 234333 355 7999999998
Q ss_pred ccccccccHHHHHHHhhhhccCCeEEEEEcC-hhhHHHHHHHHHhcCCeEEEe
Q 027609 141 LFSTIKKSLKAVVAEVDRILRPDGNLILRDD-AETIVEVEDLVKSLHWDVRMI 192 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~-~~~~~~i~~i~~~l~W~~~~~ 192 (221)
+ . ++..++.++.|+ |||.+++.+. .+...++.+.++...|++...
T Consensus 109 ~----~-~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 109 T----K-NIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp C----S-CHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred c----c-cHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEEEE
Confidence 7 3 788999999999 9999999984 445777888888888988654
No 107
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.35 E-value=2.7e-12 Score=112.15 Aligned_cols=135 Identities=17% Similarity=0.223 Sum_probs=94.7
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHc----Cccc----eeccccccCCCCCCccCeeeecc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYER----GLFG----LYHDWCESFNTYPRTYDLLHADH 140 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eR----Gl~~----~~~d~~e~f~~yp~sFDlVh~~~ 140 (221)
....+|||+|||+|.++..|+++.- ..+++.+|.+.+++.+.++ |+.+ ..+|..+ .++|..||+|.|..
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~D~v~~~~ 240 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNP-NAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFE--VDYGNDYDLVLLPN 240 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTT--SCCCSCEEEEEEES
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEEecHHHHHHHHHHHHhcCCCcceEEEeccccc--CCCCCCCcEEEEcc
Confidence 5678999999999999999988621 1256777777777777665 4422 2234322 14666699999999
Q ss_pred ccccccc-cHHHHHHHhhhhccCCeEEEEEcChh---------------------------hHHHHHHHHHhcCCeEEEe
Q 027609 141 LFSTIKK-SLKAVVAEVDRILRPDGNLILRDDAE---------------------------TIVEVEDLVKSLHWDVRMI 192 (221)
Q Consensus 141 v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~d~~~---------------------------~~~~i~~i~~~l~W~~~~~ 192 (221)
+++|+.+ +...+|.++.|+|||||++++.|... ..+++++++++-.++....
T Consensus 241 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~ 320 (335)
T 2r3s_A 241 FLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQL 320 (335)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEE
T ss_pred hhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeE
Confidence 9999963 56899999999999999999985321 0456677777777875433
Q ss_pred -ecCCCeeEEEEEec
Q 027609 193 -YTNDNQGMLCVHKT 206 (221)
Q Consensus 193 -~~~~~e~~l~~~K~ 206 (221)
+......+++++++
T Consensus 321 ~~~~~~~~~i~~~~~ 335 (335)
T 2r3s_A 321 HSLPTTQQQVIVAYK 335 (335)
T ss_dssp ECCTTSSSEEEEEEC
T ss_pred EECCCCceeEEEecC
Confidence 23334567777653
No 108
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.35 E-value=1.9e-12 Score=104.96 Aligned_cols=130 Identities=9% Similarity=0.162 Sum_probs=79.3
Q ss_pred CCeEEeecCcchHHHHHHhhCCCe-EEEeccCCCCCCHHHHHHcCccceeccccccCC----------------------
Q 027609 71 VRNVMDMRAVYGGFAAALKDLKVW-VMNVVPIESPDTLPIIYERGLFGLYHDWCESFN---------------------- 127 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~~v~-vmnv~~~d~~~~l~~a~eRGl~~~~~d~~e~f~---------------------- 127 (221)
..+|||+|||+|+++..|+++... ...++++|.+.+.. ..++.-...|..+ +.
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~---~~~v~~~~~d~~~-~~~~~~~~~~~i~~~~~~~~~~~~ 98 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDP---IPNVYFIQGEIGK-DNMNNIKNINYIDNMNNNSVDYKL 98 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCC---CTTCEEEECCTTT-TSSCCC-----------CHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCC---CCCceEEEccccc-hhhhhhccccccccccchhhHHHH
Confidence 578999999999999999876210 12567777765421 0112112234322 21
Q ss_pred --CCC-CccCeeeecccccccc---ccH-------HHHHHHhhhhccCCeEEEEEcCh-hhHHHHHHHHHhcCCeE-EEe
Q 027609 128 --TYP-RTYDLLHADHLFSTIK---KSL-------KAVVAEVDRILRPDGNLILRDDA-ETIVEVEDLVKSLHWDV-RMI 192 (221)
Q Consensus 128 --~yp-~sFDlVh~~~v~~h~~---~d~-------~~vL~EmdRVLRPGG~~ii~d~~-~~~~~i~~i~~~l~W~~-~~~ 192 (221)
.++ ++||+|.|+..+++.. .+. ..+|.++.|+|||||.+++.... +....+...++.. +.. ...
T Consensus 99 ~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~~-f~~v~~~ 177 (201)
T 2plw_A 99 KEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKGM-FQLVHTT 177 (201)
T ss_dssp HHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHTT-EEEEEEC
T ss_pred HhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHHH-HheEEEE
Confidence 045 7999999987665421 022 24899999999999999996432 2234455555443 432 222
Q ss_pred e-----cCCCeeEEEEEe
Q 027609 193 Y-----TNDNQGMLCVHK 205 (221)
Q Consensus 193 ~-----~~~~e~~l~~~K 205 (221)
. ..+.|.+++|++
T Consensus 178 ~~~~~r~~s~e~y~v~~~ 195 (201)
T 2plw_A 178 KPKASRNESREIYLVCKN 195 (201)
T ss_dssp CCC-----CCEEEEEEEE
T ss_pred CCcccCCcCceEEEEEec
Confidence 1 235799999987
No 109
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.35 E-value=2.4e-12 Score=101.99 Aligned_cols=114 Identities=20% Similarity=0.217 Sum_probs=84.0
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc-cc--e-eccccccCCCCCCccCeeeec
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL-FG--L-YHDWCESFNTYPRTYDLLHAD 139 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl-~~--~-~~d~~e~f~~yp~sFDlVh~~ 139 (221)
....+|||+|||+|.++..|++.. .+++++|.+ .+++.+.++ |+ .. . ..|+.+.++ ..++||+|.|+
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~v~~~ 107 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALC-KIPDIDIAVVG 107 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHT-TSCCEEEEEES
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcc-cCCCCCEEEEC
Confidence 346799999999999999999886 267888886 477777663 33 11 2 234322122 11689999998
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEEcCh-hhHHHHHHHHHhcCCeEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA-ETIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~-~~~~~i~~i~~~l~W~~~ 190 (221)
.+++ +...++.++.|+|+|||.+++.+.. ....++.+.++...|++.
T Consensus 108 ~~~~----~~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~ 155 (192)
T 1l3i_A 108 GSGG----ELQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGFDVN 155 (192)
T ss_dssp CCTT----CHHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCE
T ss_pred CchH----HHHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCCceE
Confidence 7765 4578999999999999999998764 456778888888777654
No 110
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.34 E-value=1.1e-11 Score=105.79 Aligned_cols=119 Identities=13% Similarity=0.188 Sum_probs=88.1
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Ccc---cee-ccccccCCCCC-CccCeeeec
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLF---GLY-HDWCESFNTYP-RTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~---~~~-~d~~e~f~~yp-~sFDlVh~~ 139 (221)
...+|||+|||+|.++..|+.++.. +++++|.+ .+++.+.++ |+. .++ .|..+....++ ++||+|.|+
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~--~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~n 126 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKA--KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCN 126 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCC--EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEEC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCC--cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEEC
Confidence 4679999999999999999998643 68899986 577777665 442 222 34433222355 999999997
Q ss_pred cccccc-----c--------------ccHHHHHHHhhhhccCCeEEEEEcChhhHHHHHHHHHhcCCeEE
Q 027609 140 HLFSTI-----K--------------KSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 140 ~v~~h~-----~--------------~d~~~vL~EmdRVLRPGG~~ii~d~~~~~~~i~~i~~~l~W~~~ 190 (221)
-.+.+. . .+...++.++.|+|||||.+++.-......++...++...|...
T Consensus 127 pPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~~~~ 196 (259)
T 3lpm_A 127 PPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPK 196 (259)
T ss_dssp CCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTTEEEE
T ss_pred CCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCCCceE
Confidence 544322 0 14578999999999999999998777778888888888888865
No 111
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.34 E-value=2e-12 Score=105.29 Aligned_cols=125 Identities=12% Similarity=0.084 Sum_probs=87.2
Q ss_pred CCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHc----Cccc--ee-ccccccCCCCCCccCeeeeccc
Q 027609 71 VRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYER----GLFG--LY-HDWCESFNTYPRTYDLLHADHL 141 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~~-~d~~e~f~~yp~sFDlVh~~~v 141 (221)
..+|||+|||+|.++..|+.. +.. +++++|.+ .+++.+.++ |+.+ .+ .|+.+ ++ -+++||+|.|..+
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~-~~~~~D~i~~~~~ 141 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEA--HFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEE-FP-SEPPFDGVISRAF 141 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTS--EEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTT-SC-CCSCEEEEECSCS
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhh-CC-ccCCcCEEEEecc
Confidence 568999999999999999875 222 56888876 477777654 4432 22 23322 22 1289999998642
Q ss_pred cccccccHHHHHHHhhhhccCCeEEEEEcChhhHHHHHHHHHhcCCeEEE------eecCCCeeEEEEEec
Q 027609 142 FSTIKKSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVRM------IYTNDNQGMLCVHKT 206 (221)
Q Consensus 142 ~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~~~~~i~~i~~~l~W~~~~------~~~~~~e~~l~~~K~ 206 (221)
. ++..++.++.|+|||||++++.......++++.+.+ .|+... ++..+...+++++|.
T Consensus 142 ----~-~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 142 ----A-SLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPE--EYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp ----S-SHHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTSCT--TEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred ----C-CHHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHHhc--CCceeeeeeeccCCCCCceEEEEEEec
Confidence 3 678999999999999999999976666677777665 777543 122345777777774
No 112
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.34 E-value=8.4e-13 Score=106.93 Aligned_cols=101 Identities=18% Similarity=0.156 Sum_probs=75.9
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc--ccee-ccccccCCCCC-CccCeeeecc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL--FGLY-HDWCESFNTYP-RTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl--~~~~-~d~~e~f~~yp-~sFDlVh~~~ 140 (221)
...+|||+|||+|.++..+++++.. .++++|.+ ++++.+.++ |+ +..+ .|..+....++ ++||+|.|+.
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSRGAA--SVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS--EEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCEEEEeCCCcCHHHHHHHHCCCC--eEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECC
Confidence 4678999999999999988887643 47888886 588877665 43 1222 34322112254 8999999998
Q ss_pred ccccccccHHHHHHHhhh--hccCCeEEEEEcCh
Q 027609 141 LFSTIKKSLKAVVAEVDR--ILRPDGNLILRDDA 172 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdR--VLRPGG~~ii~d~~ 172 (221)
.+++..++...++.++.| +|||||.+++....
T Consensus 122 p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 122 PYNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp CTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred CCCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 888753478999999999 99999999998643
No 113
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.33 E-value=6e-12 Score=107.68 Aligned_cols=129 Identities=14% Similarity=0.176 Sum_probs=85.4
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCcc-ce-----ecccc-ccCCCCCCccCeeeeccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLF-GL-----YHDWC-ESFNTYPRTYDLLHADHL 141 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~-~~-----~~d~~-e~f~~yp~sFDlVh~~~v 141 (221)
...+|||+|||+|.|+..|++++.. +|+++|.+ +|++.+.++.-- .. +...+ +.+.. ..||.+.+..+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~--~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~D~v 112 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAK--LVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ--GRPSFTSIDVS 112 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCS--EEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS--CCCSEEEECCS
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCC--EEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc--CCCCEEEEEEE
Confidence 4678999999999999999998753 57999986 699987765210 00 11111 12221 12444444444
Q ss_pred cccccccHHHHHHHhhhhccCCeEEEEEcC-------------------h---hhHHHHHHHHHhcCCeEEEee------
Q 027609 142 FSTIKKSLKAVVAEVDRILRPDGNLILRDD-------------------A---ETIVEVEDLVKSLHWDVRMIY------ 193 (221)
Q Consensus 142 ~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~-------------------~---~~~~~i~~i~~~l~W~~~~~~------ 193 (221)
|.++ ..+|.|+.|+|||||.+++... . ...+++.+.+....|++...+
T Consensus 113 ~~~l----~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~pi~g 188 (232)
T 3opn_A 113 FISL----DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSPIKG 188 (232)
T ss_dssp SSCG----GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEECSSCB
T ss_pred hhhH----HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEccCCC
Confidence 4433 5799999999999999998721 1 124677888889999876443
Q ss_pred -cCCCeeEEEEEec
Q 027609 194 -TNDNQGMLCVHKT 206 (221)
Q Consensus 194 -~~~~e~~l~~~K~ 206 (221)
..+-|-++.++|.
T Consensus 189 ~~gn~e~l~~~~~~ 202 (232)
T 3opn_A 189 GAGNVEFLVHLLKD 202 (232)
T ss_dssp TTTBCCEEEEEEES
T ss_pred CCCCHHHHHHHhhc
Confidence 1235777777773
No 114
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.32 E-value=5.8e-13 Score=119.66 Aligned_cols=97 Identities=12% Similarity=0.187 Sum_probs=71.4
Q ss_pred CCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHcCccc-eeccccccCCCCCCccCeeeecccccccc
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYERGLFG-LYHDWCESFNTYPRTYDLLHADHLFSTIK 146 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eRGl~~-~~~d~~e~f~~yp~sFDlVh~~~v~~h~~ 146 (221)
.....+|||+|||+|.++..|+++.-. ..++.+|.+.+++.+.+..-+. ..+|. +.++|. ||+|.|..+++|+.
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~-~~~~~~D~~~~~~~a~~~~~v~~~~~d~---~~~~~~-~D~v~~~~~lh~~~ 281 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPL-IKGINFDLPQVIENAPPLSGIEHVGGDM---FASVPQ-GDAMILKAVCHNWS 281 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEECHHHHTTCCCCTTEEEEECCT---TTCCCC-EEEEEEESSGGGSC
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCC-CeEEEeChHHHHHhhhhcCCCEEEeCCc---ccCCCC-CCEEEEecccccCC
Confidence 345789999999999999999887321 1356666655665554321122 23443 234566 99999999999998
Q ss_pred ccHH--HHHHHhhhhccCCeEEEEEc
Q 027609 147 KSLK--AVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 147 ~d~~--~vL~EmdRVLRPGG~~ii~d 170 (221)
++. .+|.++.|+|||||.+++.|
T Consensus 282 -d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 282 -DEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp -HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -HHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 666 99999999999999999985
No 115
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.31 E-value=1.5e-12 Score=108.63 Aligned_cols=110 Identities=12% Similarity=0.161 Sum_probs=81.9
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCc-cc-eeccccccCCCC--CCccCeeeecccccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGL-FG-LYHDWCESFNTY--PRTYDLLHADHLFST 144 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl-~~-~~~d~~e~f~~y--p~sFDlVh~~~v~~h 144 (221)
...+|||+|||+|.++..|++++. +++++|.+ .+++.+.++.. +. ...|+.+.++ + +++||+|+|+
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~~~fD~v~~~----- 118 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAA---RWAAYDFSPELLKLARANAPHADVYEWNGKGELP-AGLGAPFGLIVSR----- 118 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCC-TTCCCCEEEEEEE-----
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHhCCCceEEEcchhhccC-CcCCCCEEEEEeC-----
Confidence 367899999999999999999864 57889986 59999988822 11 2345444443 4 4899999987
Q ss_pred ccccHHHHHHHhhhhccCCeEEEEEcChhhHHHHHHHHHhcCCeEE
Q 027609 145 IKKSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 145 ~~~d~~~vL~EmdRVLRPGG~~ii~d~~~~~~~i~~i~~~l~W~~~ 190 (221)
. ++..+|.|+.|+|||||.++..........+...+....+...
T Consensus 119 -~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~~ 162 (226)
T 3m33_A 119 -R-GPTSVILRLPELAAPDAHFLYVGPRLNVPEVPERLAAVGWDIV 162 (226)
T ss_dssp -S-CCSGGGGGHHHHEEEEEEEEEEESSSCCTHHHHHHHHTTCEEE
T ss_pred -C-CHHHHHHHHHHHcCCCcEEEEeCCcCCHHHHHHHHHHCCCeEE
Confidence 3 6789999999999999999944333334567777777666653
No 116
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.30 E-value=1.3e-11 Score=106.15 Aligned_cols=135 Identities=15% Similarity=0.156 Sum_probs=92.0
Q ss_pred CCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHc----Cccc--eeccccccCCC---CCCccCeee
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYER----GLFG--LYHDWCESFNT---YPRTYDLLH 137 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~~~d~~e~f~~---yp~sFDlVh 137 (221)
....+|||+|||+|.++..|+.. +.. +|+.+|.+ ++++++.++ |+.+ +++.-.+.++. ++++||+|.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~ 156 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPEL--ELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAV 156 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTC--EEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEE
Confidence 45789999999999998888764 322 56888886 477766654 5532 33322333432 348999999
Q ss_pred eccccccccccHHHHHHHhhhhccCCeEEEEEcC---hhhHHHHHHHHHhcCCeEEEee------cCCCeeEEEEEeccc
Q 027609 138 ADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDD---AETIVEVEDLVKSLHWDVRMIY------TNDNQGMLCVHKTYW 208 (221)
Q Consensus 138 ~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~---~~~~~~i~~i~~~l~W~~~~~~------~~~~e~~l~~~K~~w 208 (221)
|..+ . +...++.++.|+|||||.+++-.. .+.+..++..++.+.++..... .+....+++.+|.-.
T Consensus 157 s~a~----~-~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~~~k~~~ 231 (249)
T 3g89_A 157 ARAV----A-PLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKTAP 231 (249)
T ss_dssp EESS----C-CHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEEEEECSC
T ss_pred ECCc----C-CHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEEEEeCCC
Confidence 9743 2 567899999999999999988754 3445666677788888765321 123445666777655
Q ss_pred CC
Q 027609 209 RP 210 (221)
Q Consensus 209 ~~ 210 (221)
+|
T Consensus 232 t~ 233 (249)
T 3g89_A 232 TP 233 (249)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 117
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.30 E-value=1.9e-11 Score=101.46 Aligned_cols=112 Identities=12% Similarity=-0.019 Sum_probs=82.5
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Ccc-c--ee-ccccccCCCCCCccCeeeec
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLF-G--LY-HDWCESFNTYPRTYDLLHAD 139 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~-~--~~-~d~~e~f~~yp~sFDlVh~~ 139 (221)
....+|||+|||+|.++..|++++. .|+++|.+ ++++.+.++ |+. . .+ .|..+.+. ...+||+|.+.
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~~~---~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~-~~~~~D~v~~~ 129 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLAGG---RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALA-DLPLPEAVFIG 129 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGT-TSCCCSEEEEC
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcc-cCCCCCEEEEC
Confidence 4468999999999999999999853 46888886 588877665 444 2 22 23222121 22689999987
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEEcCh-hhHHHHHHHHHhcCCeEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA-ETIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~-~~~~~i~~i~~~l~W~~~ 190 (221)
..+ ++. ++.++.|+|||||.+++.... +...++.+.++...+++.
T Consensus 130 ~~~-----~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i~ 175 (204)
T 3njr_A 130 GGG-----SQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGGQLL 175 (204)
T ss_dssp SCC-----CHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEEE
T ss_pred Ccc-----cHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCCcEE
Confidence 643 466 999999999999999998754 456777777888887765
No 118
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.30 E-value=3.4e-12 Score=114.57 Aligned_cols=126 Identities=15% Similarity=0.098 Sum_probs=85.0
Q ss_pred CCCCeEEeecCcchHHHHHHhhC--CCeEEEeccCCCC-CCHHHHHHc----Cccc--e-eccccccCCCCC-CccCeee
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDL--KVWVMNVVPIESP-DTLPIIYER----GLFG--L-YHDWCESFNTYP-RTYDLLH 137 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~--~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~-~~d~~e~f~~yp-~sFDlVh 137 (221)
....+|||+|||+|++++.++.+ +. .|+++|.+ ++++.|+++ |+.. . ..|. ..+| ++||+|.
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga---~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa----~~l~d~~FDvV~ 193 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGM---RVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDE----TVIDGLEFDVLM 193 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCC---EEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCG----GGGGGCCCSEEE
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCC---EEEEEECCHHHHHHHHHHHHhcCCCCeEEEECch----hhCCCCCcCEEE
Confidence 34789999999999988765443 33 57888986 588888776 6522 2 2232 2245 9999999
Q ss_pred eccccccccccHHHHHHHhhhhccCCeEEEEEcChhhHHH----HHHHHHhcCCeEEEeec--C-CCeeEEEEEec
Q 027609 138 ADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDAETIVE----VEDLVKSLHWDVRMIYT--N-DNQGMLCVHKT 206 (221)
Q Consensus 138 ~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~~~~~----i~~i~~~l~W~~~~~~~--~-~~e~~l~~~K~ 206 (221)
+... .. ++..++.|+.|+|||||.+++++.+....- +.. ...-.|+.....+ + -...+.+++|.
T Consensus 194 ~~a~---~~-d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~-~~~~gf~~~~~~~p~~~v~N~vv~a~k~ 264 (298)
T 3fpf_A 194 VAAL---AE-PKRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSD-DDITGFRRAGVVLPSGKVNNTSVLVFKC 264 (298)
T ss_dssp ECTT---CS-CHHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCT-GGGTTEEEEEEECCCTTCCCEEEEEEEC
T ss_pred ECCC---cc-CHHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCCh-hhhhhhhheeEECCCCCcCcEEEEEEcc
Confidence 8654 24 889999999999999999999986543110 000 1122677654432 2 25668888774
No 119
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.28 E-value=1.7e-12 Score=115.71 Aligned_cols=97 Identities=10% Similarity=0.166 Sum_probs=71.4
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHcCccc-eeccccccCCCCCCccCeeeeccccccccc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYERGLFG-LYHDWCESFNTYPRTYDLLHADHLFSTIKK 147 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eRGl~~-~~~d~~e~f~~yp~sFDlVh~~~v~~h~~~ 147 (221)
....+|||+|||+|.++..|+++.-. ..++.+|.+.+++.+.+..-+. ..+|. +.++|. ||+|.+..+++|+.
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~v~~~~~d~---~~~~p~-~D~v~~~~~lh~~~- 260 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPK-LKCIVFDRPQVVENLSGSNNLTYVGGDM---FTSIPN-ADAVLLKYILHNWT- 260 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEECHHHHTTCCCBTTEEEEECCT---TTCCCC-CSEEEEESCGGGSC-
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCC-CeEEEeeCHHHHhhcccCCCcEEEeccc---cCCCCC-ccEEEeehhhccCC-
Confidence 35689999999999999999876211 1456777655666554421122 23443 234554 99999999999998
Q ss_pred cHH--HHHHHhhhhccC---CeEEEEEcC
Q 027609 148 SLK--AVVAEVDRILRP---DGNLILRDD 171 (221)
Q Consensus 148 d~~--~vL~EmdRVLRP---GG~~ii~d~ 171 (221)
++. .+|.++.|+||| ||++++.|.
T Consensus 261 d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 261 DKDCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp HHHHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 666 999999999999 999999863
No 120
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.28 E-value=1e-11 Score=103.28 Aligned_cols=135 Identities=15% Similarity=0.064 Sum_probs=89.1
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc---e-eccccccCCCCC-----CccCe
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG---L-YHDWCESFNTYP-----RTYDL 135 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~---~-~~d~~e~f~~yp-----~sFDl 135 (221)
..++|||+|||+|.++..|++.--....|+++|.+ .+++.+.++ |+.. + ..|..+.++.++ ++||+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~ 137 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDM 137 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEE
Confidence 46899999999999999998841001256888886 588877764 4422 2 234333233333 79999
Q ss_pred eeeccccccccccHHHHHHHhhhhccCCeEEEEEcChh--hHHHHHHHHHhcCCeEEEee-----cCCCeeEEEEEec
Q 027609 136 LHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDAE--TIVEVEDLVKSLHWDVRMIY-----TNDNQGMLCVHKT 206 (221)
Q Consensus 136 Vh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~--~~~~i~~i~~~l~W~~~~~~-----~~~~e~~l~~~K~ 206 (221)
|.++...+++. +...++.++ |+|||||++++.+... .-+-++.+...-.+++.... ....+.+.++.+.
T Consensus 138 V~~d~~~~~~~-~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~ 213 (221)
T 3u81_A 138 VFLDHWKDRYL-PDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRGSSSFECTHYSSYLEYMKVVDGLEKAIYQ 213 (221)
T ss_dssp EEECSCGGGHH-HHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHHCTTEEEEEEEEEETTTTEEEEEEEEEEC
T ss_pred EEEcCCcccch-HHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhhCCCceEEEcccccccCCCCCceEEEEEe
Confidence 99998888777 677788888 9999999999987532 11222333334456655432 1235678888764
No 121
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.28 E-value=1.7e-11 Score=101.18 Aligned_cols=119 Identities=14% Similarity=0.163 Sum_probs=83.4
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc--ee-ccccccCCC-CC-CccCeeeec
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG--LY-HDWCESFNT-YP-RTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~~-~d~~e~f~~-yp-~sFDlVh~~ 139 (221)
...+|||+|||+|.++..|+++.- ..+++++|.+ .+++.+.++ |+.. .+ .|..+ ++. ++ ++||+|+++
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSD-LTDYFEDGEIDRLYLN 118 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSC-GGGTSCTTCCSEEEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCCCCCCEEEEE
Confidence 356899999999999999988631 1257888886 588777664 4422 22 34332 332 55 899999998
Q ss_pred cccccccc--------cHHHHHHHhhhhccCCeEEEEEcC-hhhHHHHHHHHHhcCCeEEE
Q 027609 140 HLFSTIKK--------SLKAVVAEVDRILRPDGNLILRDD-AETIVEVEDLVKSLHWDVRM 191 (221)
Q Consensus 140 ~v~~h~~~--------d~~~vL~EmdRVLRPGG~~ii~d~-~~~~~~i~~i~~~l~W~~~~ 191 (221)
.... +.. ....+|.++.|+|||||.+++... .+..+.+.+++....|....
T Consensus 119 ~~~~-~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~ 178 (214)
T 1yzh_A 119 FSDP-WPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNG 178 (214)
T ss_dssp SCCC-CCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCC-ccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeee
Confidence 4432 211 126899999999999999999864 45667777777777887643
No 122
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.27 E-value=1.1e-11 Score=103.42 Aligned_cols=118 Identities=8% Similarity=0.042 Sum_probs=81.6
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc--ee-ccccccCCC-CC-CccCeeeec
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG--LY-HDWCESFNT-YP-RTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~~-~d~~e~f~~-yp-~sFDlVh~~ 139 (221)
...+|||+|||+|.++..|+++.- ..+++++|.+ .+++.+.++ |+.+ .+ .|..+ ++. ++ ++||.|+++
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~-l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT-LTDVFEPGEVKRVYLN 115 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG-HHHHCCTTSCCEEEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCcCCcCEEEEE
Confidence 356799999999999999988621 1267899987 588877664 5533 22 34322 322 55 899999876
Q ss_pred cccccccc--------cHHHHHHHhhhhccCCeEEEEEc-ChhhHHHHHHHHHhcCCeEE
Q 027609 140 HLFSTIKK--------SLKAVVAEVDRILRPDGNLILRD-DAETIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 140 ~v~~h~~~--------d~~~vL~EmdRVLRPGG~~ii~d-~~~~~~~i~~i~~~l~W~~~ 190 (221)
.... |.. ....+|.|+.|+|||||.+++.. .....+.+...+....|...
T Consensus 116 ~~~p-~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~ 174 (213)
T 2fca_A 116 FSDP-WPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLT 174 (213)
T ss_dssp SCCC-CCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEE
T ss_pred CCCC-CcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCccc
Confidence 3322 211 13689999999999999999885 44556677777666677653
No 123
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.27 E-value=2.8e-11 Score=103.18 Aligned_cols=133 Identities=11% Similarity=0.053 Sum_probs=88.8
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc----eeccccccCCCCC--CccCeeee
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG----LYHDWCESFNTYP--RTYDLLHA 138 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~----~~~d~~e~f~~yp--~sFDlVh~ 138 (221)
..++|||+|||+|.++..|++.--....++++|.+ ++++.+.++ |+.. ...|..+.++.++ .+||+|.+
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~ 142 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFI 142 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEE
Confidence 46899999999999999998871001256888886 588877766 5432 2234333233333 49999998
Q ss_pred ccccccccccHHHHHHHhhhhccCCeEEEEEcChh------------hHHHHHHH----HHhcCCeEEEee---cCCCee
Q 027609 139 DHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDAE------------TIVEVEDL----VKSLHWDVRMIY---TNDNQG 199 (221)
Q Consensus 139 ~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~------------~~~~i~~i----~~~l~W~~~~~~---~~~~e~ 199 (221)
.... . +...++.++.|+|||||++++.+... ....++++ ...-+|.+.+.. ....++
T Consensus 143 d~~~---~-~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~~~~DG 218 (248)
T 3tfw_A 143 DADK---P-NNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTVGTKGWDG 218 (248)
T ss_dssp CSCG---G-GHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEECSTTCSEE
T ss_pred CCch---H-HHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeecCCCCCCCe
Confidence 7532 2 56689999999999999999986532 12333333 344466665432 134689
Q ss_pred EEEEEec
Q 027609 200 MLCVHKT 206 (221)
Q Consensus 200 ~l~~~K~ 206 (221)
+.+++|+
T Consensus 219 ~~i~~~~ 225 (248)
T 3tfw_A 219 FTLAWVN 225 (248)
T ss_dssp EEEEEEC
T ss_pred eEEEEEe
Confidence 9999985
No 124
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.27 E-value=2.3e-12 Score=116.24 Aligned_cols=99 Identities=13% Similarity=0.169 Sum_probs=72.2
Q ss_pred CCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHcCccc-eeccccccCCCCCCccCeeeecccccccc
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYERGLFG-LYHDWCESFNTYPRTYDLLHADHLFSTIK 146 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eRGl~~-~~~d~~e~f~~yp~sFDlVh~~~v~~h~~ 146 (221)
.....+|||+|||+|.++..|+++.-. ..++.+|.+.+++.+.++.-+. ..+|. +.++|.. |+|++..++|||.
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~v~~~~~d~---~~~~p~~-D~v~~~~vlh~~~ 275 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPS-INAINFDLPHVIQDAPAFSGVEHLGGDM---FDGVPKG-DAIFIKWICHDWS 275 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEECHHHHTTCCCCTTEEEEECCT---TTCCCCC-SEEEEESCGGGBC
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCC-CEEEEEehHHHHHhhhhcCCCEEEecCC---CCCCCCC-CEEEEechhhcCC
Confidence 456789999999999999999885211 1346666655666554432222 23453 3456744 9999999999998
Q ss_pred c-cHHHHHHHhhhhccCCeEEEEEcC
Q 027609 147 K-SLKAVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 147 ~-d~~~vL~EmdRVLRPGG~~ii~d~ 171 (221)
+ +...+|.++.|+|||||.++|.|.
T Consensus 276 ~~~~~~~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 276 DEHCLKLLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 4 456899999999999999999863
No 125
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.27 E-value=3.2e-12 Score=108.36 Aligned_cols=98 Identities=14% Similarity=0.121 Sum_probs=61.4
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-C-CHHHH---HH----cCccce--eccccccCCC-CCCccCeee
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-D-TLPII---YE----RGLFGL--YHDWCESFNT-YPRTYDLLH 137 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~-~l~~a---~e----RGl~~~--~~d~~e~f~~-yp~sFDlVh 137 (221)
...+|||+|||+|.++..|+.+.- ..+|+++|.+ . |++.| .+ .|+.++ +..-.+.++. +...+|.|+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQ-NTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCT-TEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 467899999999999999985421 1367999987 4 76665 43 344332 2211233321 114444444
Q ss_pred ecccc----ccccccHHHHHHHhhhhccCCeEEEE
Q 027609 138 ADHLF----STIKKSLKAVVAEVDRILRPDGNLIL 168 (221)
Q Consensus 138 ~~~v~----~h~~~d~~~vL~EmdRVLRPGG~~ii 168 (221)
++... .|...++..+|.|+.|+|||||.+++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 43221 11111446789999999999999999
No 126
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.27 E-value=5.6e-12 Score=113.30 Aligned_cols=96 Identities=18% Similarity=0.192 Sum_probs=72.0
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHc----Cccc---ee-ccccccCCCCC-CccCeeeecc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYER----GLFG---LY-HDWCESFNTYP-RTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eR----Gl~~---~~-~d~~e~f~~yp-~sFDlVh~~~ 140 (221)
...+|||+|||+|.++..|++++.. +|+++|.+++++.|.++ |+.+ .+ .|. +.+ ++| ++||+|.|..
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g~~--~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~-~~~-~~~~~~fD~Iis~~ 141 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAGAR--KVIGIECSSISDYAVKIVKANKLDHVVTIIKGKV-EEV-ELPVEKVDIIISEW 141 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTTCS--EEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCT-TTC-CCSSSCEEEEEECC
T ss_pred CCCEEEEEeccchHHHHHHHHCCCC--EEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcH-HHc-cCCCCceEEEEEcc
Confidence 4678999999999999999998753 46788887777766654 4432 23 332 333 477 9999999976
Q ss_pred ccccc--cccHHHHHHHhhhhccCCeEEEEE
Q 027609 141 LFSTI--KKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 141 v~~h~--~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
+..++ ..++..++.+++|+|||||+++..
T Consensus 142 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 142 MGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp CBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 54433 238999999999999999999755
No 127
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.26 E-value=8.2e-12 Score=107.64 Aligned_cols=112 Identities=11% Similarity=0.062 Sum_probs=83.0
Q ss_pred CCCCCCeEEeecCcchHHHHHHhhC---CCeEEEeccCCCC-CCHHHHHHc-----Cccc--e-eccccccCCCCC-Ccc
Q 027609 67 NWSFVRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESP-DTLPIIYER-----GLFG--L-YHDWCESFNTYP-RTY 133 (221)
Q Consensus 67 ~~~~~r~VLD~GcG~G~faa~L~~~---~v~vmnv~~~d~~-~~l~~a~eR-----Gl~~--~-~~d~~e~f~~yp-~sF 133 (221)
......+|||+|||+|.++..|++. +. +++++|.+ ++++.+.++ |+.. . ..|..+ +++ ++|
T Consensus 107 ~~~~~~~VLD~G~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~---~~~~~~f 180 (275)
T 1yb2_A 107 GLRPGMDILEVGVGSGNMSSYILYALNGKG---TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD---FISDQMY 180 (275)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHTTSS---EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT---CCCSCCE
T ss_pred CCCCcCEEEEecCCCCHHHHHHHHHcCCCC---EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc---cCcCCCc
Confidence 3445789999999999999999876 33 56888886 588877766 5322 2 234322 455 899
Q ss_pred CeeeeccccccccccHHHHHHHhhhhccCCeEEEEEcChh-hHHHHHHHHHhcCCeEE
Q 027609 134 DLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDAE-TIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 134 DlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~-~~~~i~~i~~~l~W~~~ 190 (221)
|+|.+ |.+ ++..+|.++.|+|||||.+++.+... ..+++.+.++...|...
T Consensus 181 D~Vi~-----~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~~ 232 (275)
T 1yb2_A 181 DAVIA-----DIP-DPWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHHL 232 (275)
T ss_dssp EEEEE-----CCS-CGGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEEE
T ss_pred cEEEE-----cCc-CHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEE
Confidence 99998 355 78899999999999999999998765 45666666666666643
No 128
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.26 E-value=3.9e-12 Score=110.93 Aligned_cols=102 Identities=10% Similarity=0.024 Sum_probs=75.3
Q ss_pred CCCCeEEeecCcc---hHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHcC----ccc-eecccccc-----C----CCC
Q 027609 69 SFVRNVMDMRAVY---GGFAAALKDL-KVWVMNVVPIESP-DTLPIIYERG----LFG-LYHDWCES-----F----NTY 129 (221)
Q Consensus 69 ~~~r~VLD~GcG~---G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eRG----l~~-~~~d~~e~-----f----~~y 129 (221)
..+++|||+|||+ |.++..+... +- ..|+.+|.+ .|++.+.++- -+. +..|..+. . ..+
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~~~p~--~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQSVNPD--ARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHHHCTT--CEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred cCCCEEEEECCCCCCCChHHHHHHHhCCC--CEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccC
Confidence 3478999999999 9887766553 21 257889986 6999888762 111 12232210 0 125
Q ss_pred C-CccCeeeeccccccccc-cHHHHHHHhhhhccCCeEEEEEcCh
Q 027609 130 P-RTYDLLHADHLFSTIKK-SLKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 130 p-~sFDlVh~~~v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
+ .+||+|.+..+|+|+++ ++..+|.|+.|+|||||+|++++..
T Consensus 154 d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 154 DFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp CTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred CCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 5 69999999999999984 4999999999999999999999754
No 129
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.25 E-value=9.1e-12 Score=104.33 Aligned_cols=129 Identities=11% Similarity=0.083 Sum_probs=83.2
Q ss_pred CCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHcCc--cc---eeccccccC--CCCCCccCeeeec
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYERGL--FG---LYHDWCESF--NTYPRTYDLLHAD 139 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eRGl--~~---~~~d~~e~f--~~yp~sFDlVh~~ 139 (221)
....+|||+|||+|.++..|+++ +. ..|+++|.+ .+++.+.++.- .. ...|..+.. .+++.+||+|.++
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADK--GIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYED 150 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTT--SEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEEC
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCC--cEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEEe
Confidence 34678999999999999999887 41 256888886 48877766521 11 223422210 2344789999832
Q ss_pred cccccccccH---HHHHHHhhhhccCCeEEEEE----cCh------h-hHHHHHHHHHhcCCeEEEeec----CCCeeEE
Q 027609 140 HLFSTIKKSL---KAVVAEVDRILRPDGNLILR----DDA------E-TIVEVEDLVKSLHWDVRMIYT----NDNQGML 201 (221)
Q Consensus 140 ~v~~h~~~d~---~~vL~EmdRVLRPGG~~ii~----d~~------~-~~~~i~~i~~~l~W~~~~~~~----~~~e~~l 201 (221)
.. ++ ..+|.++.|+|||||++++. ... . ..+.++ ++.+..++...... ..+--++
T Consensus 151 -----~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~~~~~~~~~~v 223 (230)
T 1fbn_A 151 -----VA-QPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDIEPFEKDHVMF 223 (230)
T ss_dssp -----CC-STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEECTTTSTTEEEE
T ss_pred -----cC-ChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEccCCCccceEEE
Confidence 33 44 78899999999999999995 110 0 225666 66666776543221 1235677
Q ss_pred EEEec
Q 027609 202 CVHKT 206 (221)
Q Consensus 202 ~~~K~ 206 (221)
+++|+
T Consensus 224 ~~~k~ 228 (230)
T 1fbn_A 224 VGIWE 228 (230)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 88873
No 130
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.25 E-value=5.7e-12 Score=106.32 Aligned_cols=118 Identities=14% Similarity=0.115 Sum_probs=78.4
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc--e-eccccccCC-CCC-CccCeeeec
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG--L-YHDWCESFN-TYP-RTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~-~~d~~e~f~-~yp-~sFDlVh~~ 139 (221)
....|||+|||+|.++..|+++.-. .+++++|.+ .+++.+.++ |+.+ . ..|..+.++ .++ ++||.|++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~-~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPE-QDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTT-SEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCC-CeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 4678999999999999999876322 257899986 477765544 5533 2 234322122 156 999999987
Q ss_pred cccccccc--cH------HHHHHHhhhhccCCeEEEEEcChh-hHHHHHHHHHhc-CCeE
Q 027609 140 HLFSTIKK--SL------KAVVAEVDRILRPDGNLILRDDAE-TIVEVEDLVKSL-HWDV 189 (221)
Q Consensus 140 ~v~~h~~~--d~------~~vL~EmdRVLRPGG~~ii~d~~~-~~~~i~~i~~~l-~W~~ 189 (221)
.... |+. .. ..++.++.|+|||||.+++....+ ..+.+..++... .|+.
T Consensus 113 ~~~p-~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~~~~~~~ 171 (218)
T 3dxy_A 113 FPDP-WHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYKN 171 (218)
T ss_dssp SCCC-CCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEEE
T ss_pred CCCC-ccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHhCCCccc
Confidence 3332 221 11 259999999999999999986544 566666665543 4543
No 131
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.25 E-value=1.6e-11 Score=101.47 Aligned_cols=133 Identities=13% Similarity=0.081 Sum_probs=86.0
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc---e-eccccccCCCCC----CccCee
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG---L-YHDWCESFNTYP----RTYDLL 136 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~---~-~~d~~e~f~~yp----~sFDlV 136 (221)
...+|||+|||+|.++..|++.--....++++|.+ .+++.+.++ |+.. . ..|..+.++.++ .+||+|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 46799999999999999999871101256888875 577776654 5432 2 234323222222 579999
Q ss_pred eeccccccccccHHHHHHHhhhhccCCeEEEEEcChh------------hHHHHHHHH----HhcCCeEEEee---cCCC
Q 027609 137 HADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDAE------------TIVEVEDLV----KSLHWDVRMIY---TNDN 197 (221)
Q Consensus 137 h~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~------------~~~~i~~i~----~~l~W~~~~~~---~~~~ 197 (221)
.+..... +...++.++.|+|||||++++.+... ....++++. ..-++.+.+.. ..+.
T Consensus 138 ~~d~~~~----~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~~~ 213 (223)
T 3duw_A 138 FIDADKQ----NNPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSATALQTVGSKGY 213 (223)
T ss_dssp EECSCGG----GHHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETTEE
T ss_pred EEcCCcH----HHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEeccCCCCC
Confidence 9876533 45689999999999999999975432 123333333 33456655432 3446
Q ss_pred eeEEEEEec
Q 027609 198 QGMLCVHKT 206 (221)
Q Consensus 198 e~~l~~~K~ 206 (221)
+++++++++
T Consensus 214 dG~~~~~~~ 222 (223)
T 3duw_A 214 DGFIMAVVK 222 (223)
T ss_dssp EEEEEEEEC
T ss_pred CeeEEEEEe
Confidence 788888864
No 132
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.25 E-value=1.5e-12 Score=113.84 Aligned_cols=96 Identities=11% Similarity=0.109 Sum_probs=59.1
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHcCcc------c--eeccccccCCCCC-CccCeeeecc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYERGLF------G--LYHDWCESFNTYP-RTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eRGl~------~--~~~d~~e~f~~yp-~sFDlVh~~~ 140 (221)
...+|||+|||+|+++..|++++ . |+++|.+.|+..+.++... + .+.+ +..+..+| ++||+|.|+.
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~~-~---V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~-~~D~~~l~~~~fD~V~sd~ 148 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASRP-H---VMDVRAYTLGVGGHEVPRITESYGWNIVKFKS-RVDIHTLPVERTDVIMCDV 148 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTST-T---EEEEEEECCCCSSCCCCCCCCBTTGGGEEEEC-SCCTTTSCCCCCSEEEECC
T ss_pred CCCEEEEeCcCCCHHHHHHHHcC-c---EEEEECchhhhhhhhhhhhhhccCCCeEEEec-ccCHhHCCCCCCcEEEEeC
Confidence 36789999999999999998872 2 3444443332211111111 1 1210 11122345 8999999986
Q ss_pred ccccccc---cHH---HHHHHhhhhccCCe--EEEEEcC
Q 027609 141 LFSTIKK---SLK---AVVAEVDRILRPDG--NLILRDD 171 (221)
Q Consensus 141 v~~h~~~---d~~---~vL~EmdRVLRPGG--~~ii~d~ 171 (221)
. .+... +.. .+|.++.|+||||| .|++..-
T Consensus 149 ~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 149 G-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred c-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeC
Confidence 6 32210 111 38999999999999 9999753
No 133
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.25 E-value=1.2e-11 Score=112.43 Aligned_cols=99 Identities=16% Similarity=0.167 Sum_probs=73.6
Q ss_pred CCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHc----Ccc---ceec-cccccCCCCCCccCeeeec
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYER----GLF---GLYH-DWCESFNTYPRTYDLLHAD 139 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eR----Gl~---~~~~-d~~e~f~~yp~sFDlVh~~ 139 (221)
.....+|||+|||+|.++..+++++.. +|+++|.++|++.+.++ |+. .+++ |. +.+ ++|++||+|+|.
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g~~--~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~-~~~~~~D~Iv~~ 136 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAGAR--KVYAVEATKMADHARALVKANNLDHIVEVIEGSV-EDI-SLPEKVDVIISE 136 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTTCS--EEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCG-GGC-CCSSCEEEEEEC
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcCCC--EEEEEccHHHHHHHHHHHHHcCCCCeEEEEECch-hhc-CcCCcceEEEEc
Confidence 345789999999999999999998752 56888877888776654 442 2333 43 333 256999999996
Q ss_pred ccccccc--ccHHHHHHHhhhhccCCeEEEEEc
Q 027609 140 HLFSTIK--KSLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 140 ~v~~h~~--~d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
.+.+.+. .++..++.+++|+|||||.+++++
T Consensus 137 ~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 137 WMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp CCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred ChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 5444332 278899999999999999998874
No 134
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.25 E-value=5.3e-12 Score=112.74 Aligned_cols=129 Identities=12% Similarity=0.131 Sum_probs=86.2
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----CccceeccccccCCCC-CCccCeeeeccccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFGLYHDWCESFNTY-PRTYDLLHADHLFS 143 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~~~~d~~e~f~~y-p~sFDlVh~~~v~~ 143 (221)
...+|||+|||+|.++..|++++-. .+++++|.+ .+++.+.++ |+...+. .+..+ .+ +++||+|.|+..|+
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~-~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~-~~d~~-~~~~~~fD~Iv~~~~~~ 272 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPK-IRLTLCDVSAPAVEASRATLAANGVEGEVF-ASNVF-SEVKGRFDMIISNPPFH 272 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTT-CBCEEEESBHHHHHHHHHHHHHTTCCCEEE-ECSTT-TTCCSCEEEEEECCCCC
T ss_pred CCCeEEEecCccCHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhCCCCEEE-Ecccc-ccccCCeeEEEECCCcc
Confidence 3568999999999999999887421 156888886 478877665 3322221 12222 34 48999999999887
Q ss_pred c-----ccccHHHHHHHhhhhccCCeEEEEEcCh--hhHHHHHHHHHhcCCeEEEeecCCCeeEEEEEec
Q 027609 144 T-----IKKSLKAVVAEVDRILRPDGNLILRDDA--ETIVEVEDLVKSLHWDVRMIYTNDNQGMLCVHKT 206 (221)
Q Consensus 144 h-----~~~d~~~vL~EmdRVLRPGG~~ii~d~~--~~~~~i~~i~~~l~W~~~~~~~~~~e~~l~~~K~ 206 (221)
+ .. +...+|.|+.|+|||||.+++.... +.-..++..+.. +...-.+.+=+|+.++|.
T Consensus 273 ~g~~~~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~l~~~f~~----~~~~~~~~gf~v~~~~k~ 337 (343)
T 2pjd_A 273 DGMQTSLD-AAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGF----HEVIAQTGRFKVYRAIMT 337 (343)
T ss_dssp SSSHHHHH-HHHHHHHHHGGGEEEEEEEEEEEETTSSHHHHHHHHHSC----CEEEEECSSEEEEEEEC-
T ss_pred cCccCCHH-HHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHHHHHhcCc----eEEEeeCCCEEEEEEEeC
Confidence 5 23 7889999999999999999998543 233344444332 222334456677777663
No 135
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.25 E-value=8.7e-12 Score=106.43 Aligned_cols=118 Identities=14% Similarity=0.071 Sum_probs=76.3
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----------Cccc--ee-ccccccCCC-CC-Ccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----------GLFG--LY-HDWCESFNT-YP-RTY 133 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----------Gl~~--~~-~d~~e~f~~-yp-~sF 133 (221)
...+|||+|||+|.++..|+.+.-. .+++++|.+ .+++.|.++ ++.+ .+ .|..+.++. |+ ++|
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~-~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPD-TLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTT-SEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCC-CeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 4568999999999999999886311 267899987 588877643 3332 22 343221221 56 999
Q ss_pred Ceeeeccccccccc--------cHHHHHHHhhhhccCCeEEEEE-cChhhHHHHHHHHHhcC-CeE
Q 027609 134 DLLHADHLFSTIKK--------SLKAVVAEVDRILRPDGNLILR-DDAETIVEVEDLVKSLH-WDV 189 (221)
Q Consensus 134 DlVh~~~v~~h~~~--------d~~~vL~EmdRVLRPGG~~ii~-d~~~~~~~i~~i~~~l~-W~~ 189 (221)
|.|+++.... |.. ....+|.|+.|+|||||.|++. |.....+.+.+.+..-. |..
T Consensus 125 D~v~~~~~dp-~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~~f~~ 189 (235)
T 3ckk_A 125 TKMFFLFPDP-HFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHPLFER 189 (235)
T ss_dssp EEEEEESCC------------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEEE
T ss_pred eEEEEeCCCc-hhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCCCccc
Confidence 9998753221 110 0147999999999999999986 44455566655555443 443
No 136
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.24 E-value=1e-11 Score=102.22 Aligned_cols=118 Identities=13% Similarity=0.139 Sum_probs=79.1
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHH--------HcCccc--e-eccccccCCCCC-CccCe
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIY--------ERGLFG--L-YHDWCESFNTYP-RTYDL 135 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~--------eRGl~~--~-~~d~~e~f~~yp-~sFDl 135 (221)
....+|||+|||+|.++..|+++.- ..+++++|.+ +|++.+. .+|+.. . ..|. +.+ +++ ++ |.
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~-~~l-~~~~~~-d~ 101 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNP-SRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATA-ERL-PPLSGV-GE 101 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCT-TEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCS-TTC-CSCCCE-EE
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecch-hhC-CCCCCC-CE
Confidence 3467899999999999999998721 1267899986 5787532 234433 2 2343 334 355 55 66
Q ss_pred eeec---cccc--cccccHHHHHHHhhhhccCCeEEEEEcC------------------hh-hHHHHHHHHHhcCCeEEE
Q 027609 136 LHAD---HLFS--TIKKSLKAVVAEVDRILRPDGNLILRDD------------------AE-TIVEVEDLVKSLHWDVRM 191 (221)
Q Consensus 136 Vh~~---~v~~--h~~~d~~~vL~EmdRVLRPGG~~ii~d~------------------~~-~~~~i~~i~~~l~W~~~~ 191 (221)
+... ..+. |.. ++..+|.|+.|+|||||.++++.. .. ..+.+.+.+..-.|++..
T Consensus 102 v~~~~~~~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~ 180 (218)
T 3mq2_A 102 LHVLMPWGSLLRGVLG-SSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLAD 180 (218)
T ss_dssp EEEESCCHHHHHHHHT-SSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEE
T ss_pred EEEEccchhhhhhhhc-cHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCcee
Confidence 6632 2222 455 779999999999999999999631 11 234477888888998753
No 137
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.23 E-value=4.7e-12 Score=114.27 Aligned_cols=99 Identities=13% Similarity=0.142 Sum_probs=72.5
Q ss_pred CCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHcCccc-eeccccccCCCCCCccCeeeecccccccc
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYERGLFG-LYHDWCESFNTYPRTYDLLHADHLFSTIK 146 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eRGl~~-~~~d~~e~f~~yp~sFDlVh~~~v~~h~~ 146 (221)
.....+|||+|||+|.++..|+++.-. ..++.+|.+.+++.+.++.-+. ..+|. +.++|.. |+|++..++|||.
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~v~~~~~D~---~~~~p~~-D~v~~~~vlh~~~ 273 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPT-IKGVNFDLPHVISEAPQFPGVTHVGGDM---FKEVPSG-DTILMKWILHDWS 273 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEECHHHHTTCCCCTTEEEEECCT---TTCCCCC-SEEEEESCGGGSC
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCC-CeEEEecCHHHHHhhhhcCCeEEEeCCc---CCCCCCC-CEEEehHHhccCC
Confidence 456789999999999999999875211 1346666655665554432222 23453 3356744 9999999999997
Q ss_pred c-cHHHHHHHhhhhccCCeEEEEEcC
Q 027609 147 K-SLKAVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 147 ~-d~~~vL~EmdRVLRPGG~~ii~d~ 171 (221)
+ +...+|.++.|+|||||+++|.|.
T Consensus 274 d~~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 274 DQHCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 4 567899999999999999999863
No 138
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.23 E-value=8.9e-12 Score=102.93 Aligned_cols=126 Identities=10% Similarity=0.088 Sum_probs=83.9
Q ss_pred CCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc--cc--ee-ccccccCCCCC-Cc-cCeeee
Q 027609 71 VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL--FG--LY-HDWCESFNTYP-RT-YDLLHA 138 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl--~~--~~-~d~~e~f~~yp-~s-FDlVh~ 138 (221)
..+|||+|||+|.++..++.++.. .|+++|.+ ++++.+.++ |+ .. .+ .|..+.++.++ ++ ||+|.+
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQAK--KVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCS--EEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCeEEEcCCccCHHHHHHHHccCC--EEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 568999999999999988877642 57899987 588877765 33 12 22 34322222233 78 999999
Q ss_pred ccccccccccHHHHHHHh--hhhccCCeEEEEEcChhhHHHHHHHHHhcCCeEEEeecCCCeeEEEEEe
Q 027609 139 DHLFSTIKKSLKAVVAEV--DRILRPDGNLILRDDAETIVEVEDLVKSLHWDVRMIYTNDNQGMLCVHK 205 (221)
Q Consensus 139 ~~v~~h~~~d~~~vL~Em--dRVLRPGG~~ii~d~~~~~~~i~~i~~~l~W~~~~~~~~~~e~~l~~~K 205 (221)
+..|+ .. +...++.++ .|+|||||.+++...... +.. ..-.|.......-+...+.+.+|
T Consensus 132 ~~~~~-~~-~~~~~l~~~~~~~~LkpgG~l~i~~~~~~---~~~--~~~~~~~~~~~~yG~~~~~~~~~ 193 (201)
T 2ift_A 132 DPPFH-FN-LAEQAISLLCENNWLKPNALIYVETEKDK---PLI--TPENWTLLKEKTTGIVSYRLYQN 193 (201)
T ss_dssp CCCSS-SC-HHHHHHHHHHHTTCEEEEEEEEEEEESSS---CCC--CCTTEEEEEEEEETTEEEEEEEE
T ss_pred CCCCC-Cc-cHHHHHHHHHhcCccCCCcEEEEEECCCC---Ccc--ccchhHHHHHHhcCCEEEEEEec
Confidence 87764 33 778899999 889999999999876533 110 01246543322334556666555
No 139
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.23 E-value=9.8e-12 Score=105.31 Aligned_cols=111 Identities=10% Similarity=0.085 Sum_probs=76.0
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc------------Cccc--e-eccccccCCC-CC-C
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER------------GLFG--L-YHDWCESFNT-YP-R 131 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR------------Gl~~--~-~~d~~e~f~~-yp-~ 131 (221)
...+|||+|||+|.|+..|+..+.. .+++++|.+ .+++.+.++ |+.+ . ..|..+.++. |+ +
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPE-DLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTT-SEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCC-CCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 4578999999999999999887422 267899986 488777654 5533 2 2343221221 55 8
Q ss_pred ccCeeeeccccccccccH-------------HHHHHHhhhhccCCeEEEEE-cChhhHHHHHHHHHhcCC
Q 027609 132 TYDLLHADHLFSTIKKSL-------------KAVVAEVDRILRPDGNLILR-DDAETIVEVEDLVKSLHW 187 (221)
Q Consensus 132 sFDlVh~~~v~~h~~~d~-------------~~vL~EmdRVLRPGG~~ii~-d~~~~~~~i~~i~~~l~W 187 (221)
+||.|... ++ ++ ..++.++.|+|||||.+++. |...+.+.+...+..-.+
T Consensus 128 ~~d~v~~~-----~p-~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 128 QLSKMFFC-----FP-DPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHPL 191 (246)
T ss_dssp CEEEEEEE-----SC-CCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHSTT
T ss_pred ccCEEEEE-----CC-CcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCcC
Confidence 88888743 23 23 48999999999999999985 555556666655555443
No 140
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.22 E-value=1.1e-11 Score=107.88 Aligned_cols=112 Identities=17% Similarity=0.183 Sum_probs=84.9
Q ss_pred CCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc---ee-ccccccCCCCCCccCeeeeccc
Q 027609 71 VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG---LY-HDWCESFNTYPRTYDLLHADHL 141 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~---~~-~d~~e~f~~yp~sFDlVh~~~v 141 (221)
..+|||+|||+|+|+..+++++.. .|+++|.+ .+++.+.++ |+.+ .+ .|. ..+.+ +++||+|.++..
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~-~~~~~-~~~fD~Vi~~~p 201 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN-RDFPG-ENIADRILMGYV 201 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT-TTCCC-CSCEEEEEECCC
T ss_pred CCEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCH-HHhcc-cCCccEEEECCc
Confidence 679999999999999999988653 57899986 588877665 5533 22 232 22322 589999998633
Q ss_pred cccccccHHHHHHHhhhhccCCeEEEEEcCh-------hhHHHHHHHHHhcCCeEEE
Q 027609 142 FSTIKKSLKAVVAEVDRILRPDGNLILRDDA-------ETIVEVEDLVKSLHWDVRM 191 (221)
Q Consensus 142 ~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~-------~~~~~i~~i~~~l~W~~~~ 191 (221)
. +...++.++.|+|||||++++.+.. +..+.+.+.++...|++..
T Consensus 202 ~-----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 202 V-----RTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp S-----SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred h-----hHHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 2 4467899999999999999997654 3568888899999998865
No 141
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.22 E-value=2.3e-11 Score=100.36 Aligned_cols=131 Identities=17% Similarity=0.134 Sum_probs=84.7
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc---e-eccccccCCCCC-----CccCe
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG---L-YHDWCESFNTYP-----RTYDL 135 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~---~-~~d~~e~f~~yp-----~sFDl 135 (221)
...+|||+|||+|.++..|++.--....++++|.+ .+++.+.++ |+.. . ..|..+.++.++ ++||+
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 46799999999999999998861001257888886 577777665 4432 2 224323222222 79999
Q ss_pred eeeccccccccccHHHHHHHhhhhccCCeEEEEEcChh------------hHHHHHHHHH----hcCCeEEEeecCCCee
Q 027609 136 LHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDAE------------TIVEVEDLVK----SLHWDVRMIYTNDNQG 199 (221)
Q Consensus 136 Vh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~------------~~~~i~~i~~----~l~W~~~~~~~~~~e~ 199 (221)
|++... ..+...++.++.|+|||||++++.+... ....++.+.. .-+|...+.. -.+.
T Consensus 144 v~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp--~~dG 217 (225)
T 3tr6_A 144 IYIDAD----KANTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILIP--IGDG 217 (225)
T ss_dssp EEECSC----GGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEC--STTC
T ss_pred EEECCC----HHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEEEE--cCCc
Confidence 997643 2267789999999999999999986431 1233444433 3345554432 2456
Q ss_pred EEEEEec
Q 027609 200 MLCVHKT 206 (221)
Q Consensus 200 ~l~~~K~ 206 (221)
+++++|.
T Consensus 218 ~~~~~k~ 224 (225)
T 3tr6_A 218 LTLARKK 224 (225)
T ss_dssp EEEEEEC
T ss_pred cEEEEEC
Confidence 8888874
No 142
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.21 E-value=2.1e-11 Score=109.29 Aligned_cols=95 Identities=15% Similarity=0.171 Sum_probs=70.3
Q ss_pred CCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHc----Cc---cceec-cccccCCCCC-CccCeeee
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYER----GL---FGLYH-DWCESFNTYP-RTYDLLHA 138 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eR----Gl---~~~~~-d~~e~f~~yp-~sFDlVh~ 138 (221)
..+..+|||+|||+|.++..+++.+.. .++++|.+++++.+.++ |+ +..+. |. +.+ ++| ++||+|.|
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~--~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~-~~~-~~~~~~~D~Ivs 137 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAK--KVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKI-EEV-HLPVEKVDVIIS 137 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCS--EEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCT-TTS-CCSCSCEEEEEE
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCC--EEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeH-HHh-cCCCCcEEEEEE
Confidence 345679999999999999999998742 46778876677776654 43 22232 32 223 466 89999999
Q ss_pred ccc---cccccccHHHHHHHhhhhccCCeEEE
Q 027609 139 DHL---FSTIKKSLKAVVAEVDRILRPDGNLI 167 (221)
Q Consensus 139 ~~v---~~h~~~d~~~vL~EmdRVLRPGG~~i 167 (221)
..+ +.|.. ++..+|.++.|+|||||.++
T Consensus 138 ~~~~~~l~~~~-~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 138 EWMGYFLLFES-MLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CCCBTTBTTTC-HHHHHHHHHHHHEEEEEEEE
T ss_pred cCchhhccCHH-HHHHHHHHHHhhcCCCcEEE
Confidence 763 33333 78899999999999999998
No 143
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.21 E-value=1.2e-11 Score=99.49 Aligned_cols=130 Identities=18% Similarity=0.209 Sum_probs=74.7
Q ss_pred CCeEEeecCcchHHHHHHhhC-CCe-------EEEeccCCCCCCHHHHHHcCccce-ecccccc-C-----CCCC-CccC
Q 027609 71 VRNVMDMRAVYGGFAAALKDL-KVW-------VMNVVPIESPDTLPIIYERGLFGL-YHDWCES-F-----NTYP-RTYD 134 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~-~v~-------vmnv~~~d~~~~l~~a~eRGl~~~-~~d~~e~-f-----~~yp-~sFD 134 (221)
..+|||+|||+|.++..|+++ +.. ...++++|.+.+... + +..-. ..|..+. + ..++ ++||
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~--~-~~~~~~~~d~~~~~~~~~~~~~~~~~~fD 99 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPL--E-GATFLCPADVTDPRTSQRILEVLPGRRAD 99 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCC--T-TCEEECSCCTTSHHHHHHHHHHSGGGCEE
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccC--C-CCeEEEeccCCCHHHHHHHHHhcCCCCCc
Confidence 679999999999999999886 320 025678887653211 1 11111 2221110 0 0145 6999
Q ss_pred eeeeccccc----cccccH-------HHHHHHhhhhccCCeEEEEEcChh-hHHHHHHHHHhcCCe-EEEee-----cCC
Q 027609 135 LLHADHLFS----TIKKSL-------KAVVAEVDRILRPDGNLILRDDAE-TIVEVEDLVKSLHWD-VRMIY-----TND 196 (221)
Q Consensus 135 lVh~~~v~~----h~~~d~-------~~vL~EmdRVLRPGG~~ii~d~~~-~~~~i~~i~~~l~W~-~~~~~-----~~~ 196 (221)
+|.|+..++ |.. +. ..+|.|+.|+|||||.+++.+... ....+...++.. +. +.... ...
T Consensus 100 ~V~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~-f~~v~~~~~~~~~~~~ 177 (196)
T 2nyu_A 100 VILSDMAPNATGFRDL-DHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEE-FQNVRIIKPEASRKES 177 (196)
T ss_dssp EEEECCCCCCCSCHHH-HHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHHH-EEEEEEECCC------
T ss_pred EEEeCCCCCCCCCccc-CHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHHH-hcceEEECCcccCccC
Confidence 999965443 222 33 589999999999999999986432 234444444443 32 22221 234
Q ss_pred CeeEEEEEe
Q 027609 197 NQGMLCVHK 205 (221)
Q Consensus 197 ~e~~l~~~K 205 (221)
.|.+++|+.
T Consensus 178 ~e~~~v~~g 186 (196)
T 2nyu_A 178 SEVYFLATQ 186 (196)
T ss_dssp --EEEEEEE
T ss_pred ceEEEEeee
Confidence 688888775
No 144
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.21 E-value=1.6e-11 Score=110.17 Aligned_cols=98 Identities=12% Similarity=0.104 Sum_probs=73.4
Q ss_pred CCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHc----Ccc---cee-ccccccCCCCCCccCeeeec
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYER----GLF---GLY-HDWCESFNTYPRTYDLLHAD 139 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eR----Gl~---~~~-~d~~e~f~~yp~sFDlVh~~ 139 (221)
..+..+|||+|||+|.++..+++++.. +|+++|.+.+++.+.++ |+. .++ .|. +.+ ++|.+||+|.|.
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~g~~--~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~-~~~-~~~~~~D~Ivs~ 123 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQAGAR--KIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKV-EEV-SLPEQVDIIISE 123 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCS--EEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCT-TTC-CCSSCEEEEEEC
T ss_pred cCCcCEEEEcCCCccHHHHHHHhCCCC--EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcch-hhC-CCCCceeEEEEe
Confidence 345679999999999999999988652 46777776677766554 542 222 232 222 346889999999
Q ss_pred cccccccc-cHHHHHHHhhhhccCCeEEEEE
Q 027609 140 HLFSTIKK-SLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 140 ~v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
.++.|+.. +....+.++.|+|||||.+++.
T Consensus 124 ~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 124 PMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred CchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 88888764 6678899999999999999865
No 145
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.20 E-value=2.6e-11 Score=102.05 Aligned_cols=113 Identities=16% Similarity=0.210 Sum_probs=82.8
Q ss_pred CCCCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHc----Cccc----eeccccccCCCCC-CccCe
Q 027609 67 NWSFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYER----GLFG----LYHDWCESFNTYP-RTYDL 135 (221)
Q Consensus 67 ~~~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eR----Gl~~----~~~d~~e~f~~yp-~sFDl 135 (221)
......+|||+|||+|.++..|++. +-. ..++.+|.+ ++++.+.++ |+.+ ...|..+ .++ ++||+
T Consensus 90 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~~D~ 165 (255)
T 3mb5_A 90 GISPGDFIVEAGVGSGALTLFLANIVGPE-GRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE---GIEEENVDH 165 (255)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTT-SEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG---CCCCCSEEE
T ss_pred CCCCCCEEEEecCCchHHHHHHHHHhCCC-eEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh---ccCCCCcCE
Confidence 3445789999999999999999887 211 146888886 588877766 5543 2235433 356 88999
Q ss_pred eeeccccccccccHHHHHHHhhhhccCCeEEEEEcC-hhhHHHHHHHHHhcC--CeE
Q 027609 136 LHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDD-AETIVEVEDLVKSLH--WDV 189 (221)
Q Consensus 136 Vh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~-~~~~~~i~~i~~~l~--W~~ 189 (221)
|.++ .+ ++..++.++.|+|||||.+++... .+...++.+.++... |..
T Consensus 166 v~~~-----~~-~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~ 216 (255)
T 3mb5_A 166 VILD-----LP-QPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMK 216 (255)
T ss_dssp EEEC-----SS-CGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSC
T ss_pred EEEC-----CC-CHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCccc
Confidence 9884 45 678899999999999999998865 445666777777666 643
No 146
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.20 E-value=6e-12 Score=112.30 Aligned_cols=96 Identities=14% Similarity=0.243 Sum_probs=69.0
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHc-CccceeccccccCCCCCCccCeeeecccccccccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYER-GLFGLYHDWCESFNTYPRTYDLLHADHLFSTIKKS 148 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eR-Gl~~~~~d~~e~f~~yp~sFDlVh~~~v~~h~~~d 148 (221)
...+|||+|||+|.++..|+++.-. ..++.+|.+.+++.+.+. ++.-..+|. +.++| +||+|.++.+++|+. +
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~v~~~~~d~---~~~~~-~~D~v~~~~vlh~~~-d 266 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPH-LKCTVFDQPQVVGNLTGNENLNFVGGDM---FKSIP-SADAVLLKWVLHDWN-D 266 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTT-SEEEEEECHHHHSSCCCCSSEEEEECCT---TTCCC-CCSEEEEESCGGGSC-H
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCC-CeEEEeccHHHHhhcccCCCcEEEeCcc---CCCCC-CceEEEEcccccCCC-H
Confidence 4689999999999999999886211 134555665555544331 111123443 23455 599999999999998 6
Q ss_pred HH--HHHHHhhhhccC---CeEEEEEcC
Q 027609 149 LK--AVVAEVDRILRP---DGNLILRDD 171 (221)
Q Consensus 149 ~~--~vL~EmdRVLRP---GG~~ii~d~ 171 (221)
+. .+|.++.|+||| ||.+++.|.
T Consensus 267 ~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 267 EQSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp HHHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 66 999999999999 999999753
No 147
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.20 E-value=5.3e-11 Score=100.15 Aligned_cols=95 Identities=16% Similarity=0.230 Sum_probs=68.5
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Ccc---ce-eccccccCC-CCCCccCeeeec
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLF---GL-YHDWCESFN-TYPRTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~---~~-~~d~~e~f~-~yp~sFDlVh~~ 139 (221)
...+|||+|||+|.++..|++..- ..+++++|.+ .+++.+.++ |+. .+ ..|..+.++ ..+++||+|.+.
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 468999999999999999998421 2257888886 577777664 432 22 234333222 235899999987
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
.... +...++.++.|+|||||++++.
T Consensus 150 ~~~~----~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 150 AAKA----QSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp TTSS----SHHHHHHHHGGGEEEEEEEEEE
T ss_pred CcHH----HHHHHHHHHHHhcCCCeEEEEe
Confidence 4432 5668999999999999999994
No 148
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.19 E-value=3e-11 Score=110.72 Aligned_cols=125 Identities=20% Similarity=0.246 Sum_probs=85.6
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc-ccee-ccccccCCCCC-CccCeeeeccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL-FGLY-HDWCESFNTYP-RTYDLLHADHL 141 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl-~~~~-~d~~e~f~~yp-~sFDlVh~~~v 141 (221)
...+|||+|||+|.++..|++++. +|+++|.+ .+++.+.++ |+ +..+ .|..+ + .++ ++||+|.|+..
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~---~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~-~-~~~~~~fD~Ii~npp 307 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGA---EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDE-A-LTEEARFDIIVTNPP 307 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTC---EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTT-T-SCTTCCEEEEEECCC
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhh-c-cccCCCeEEEEECCc
Confidence 467999999999999999999874 57888886 488777664 22 1222 34322 2 234 89999999998
Q ss_pred ccc-----ccccHHHHHHHhhhhccCCeEEEEEcChh--hHHHHHHHHHhcCCeEEEeecCCCeeEEEEEe
Q 027609 142 FST-----IKKSLKAVVAEVDRILRPDGNLILRDDAE--TIVEVEDLVKSLHWDVRMIYTNDNQGMLCVHK 205 (221)
Q Consensus 142 ~~h-----~~~d~~~vL~EmdRVLRPGG~~ii~d~~~--~~~~i~~i~~~l~W~~~~~~~~~~e~~l~~~K 205 (221)
|++ .. +...++.++.|+|||||.+++..... +...+++.+. ++... .+.+=+|+-+.|
T Consensus 308 ~~~~~~~~~~-~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l~~~f~----~v~~l-~~~gF~Vl~a~~ 372 (381)
T 3dmg_A 308 FHVGGAVILD-VAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFG----AFQTL-KVAEYKVLFAEK 372 (381)
T ss_dssp CCTTCSSCCH-HHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHHHHHHS----CCEEE-EESSSEEEEEEC
T ss_pred hhhcccccHH-HHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHHHHhhc----cEEEE-eCCCEEEEEEEE
Confidence 887 33 78899999999999999999985432 2334444333 23333 334455555544
No 149
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.19 E-value=8.3e-11 Score=105.64 Aligned_cols=138 Identities=12% Similarity=0.093 Sum_probs=98.3
Q ss_pred CCCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHcC---c---cc-eeccccccCCCCCCccCeeee
Q 027609 66 INWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYERG---L---FG-LYHDWCESFNTYPRTYDLLHA 138 (221)
Q Consensus 66 i~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eRG---l---~~-~~~d~~e~f~~yp~sFDlVh~ 138 (221)
+++...++|+|+|||+|.++.+|+++.-. +.++-.|.+.+++.+.++- . +. +.+|. |.+-+..+|++.+
T Consensus 175 ~~~~~~~~v~DvGgG~G~~~~~l~~~~p~-~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~---~~~~~~~~D~~~~ 250 (353)
T 4a6d_A 175 FDLSVFPLMCDLGGGAGALAKECMSLYPG-CKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDF---FKDPLPEADLYIL 250 (353)
T ss_dssp SCGGGCSEEEEETCTTSHHHHHHHHHCSS-CEEEEEECHHHHHHHHHHSCC--CCSEEEEESCT---TTSCCCCCSEEEE
T ss_pred cCcccCCeEEeeCCCCCHHHHHHHHhCCC-ceeEeccCHHHHHHHHHhhhhcccCceeeecCcc---ccCCCCCceEEEe
Confidence 45667899999999999999999887322 1345566677888777651 1 11 23442 3222266899999
Q ss_pred ccccccccc-cHHHHHHHhhhhccCCeEEEEEcCh-------h-------------------hHHHHHHHHHhcCCeEEE
Q 027609 139 DHLFSTIKK-SLKAVVAEVDRILRPDGNLILRDDA-------E-------------------TIVEVEDLVKSLHWDVRM 191 (221)
Q Consensus 139 ~~v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~d~~-------~-------------------~~~~i~~i~~~l~W~~~~ 191 (221)
..++|+|++ +-..+|.++.|.|+|||.++|.|.. + ..++.++++.+-.|+...
T Consensus 251 ~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~ 330 (353)
T 4a6d_A 251 ARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQ 330 (353)
T ss_dssp ESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEE
T ss_pred eeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEE
Confidence 999999994 3467899999999999999998631 0 135677888888888653
Q ss_pred -eecCCCeeEEEEEecc
Q 027609 192 -IYTNDNQGMLCVHKTY 207 (221)
Q Consensus 192 -~~~~~~e~~l~~~K~~ 207 (221)
........+++|+|.-
T Consensus 331 v~~~~~~~~~i~ArKgt 347 (353)
T 4a6d_A 331 FKKTGAIYDAILARKGT 347 (353)
T ss_dssp EECCSSSCEEEEEECCC
T ss_pred EEEcCCceEEEEEEecC
Confidence 3344456789999964
No 150
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.19 E-value=7.7e-11 Score=97.46 Aligned_cols=129 Identities=14% Similarity=0.154 Sum_probs=78.6
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHcCccceeccccccCCC-------CC----CccCeeee
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNT-------YP----RTYDLLHA 138 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eRGl~~~~~d~~e~f~~-------yp----~sFDlVh~ 138 (221)
...+|||+|||+|+++..|++++. .|+++|.+.+... .++.-+..|..+ ..+ ++ ++||+|.|
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~~~---~V~gvD~~~~~~~---~~v~~~~~D~~~-~~~~~~~~~~~~~~~~~~~D~Vls 97 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSLAR---KIISIDLQEMEEI---AGVRFIRCDIFK-ETIFDDIDRALREEGIEKVDDVVS 97 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTTCS---EEEEEESSCCCCC---TTCEEEECCTTS-SSHHHHHHHHHHHHTCSSEEEEEE
T ss_pred CCCEEEEEeecCCHHHHHHHHcCC---cEEEEeccccccC---CCeEEEEccccC-HHHHHHHHHHhhcccCCcceEEec
Confidence 478999999999999999999854 3566776543210 122223344322 111 11 59999999
Q ss_pred ccccc--------cccc--cHHHHHHHhhhhccCCeEEEEEcCh-hhHHHHHHHHHhcCCeEE-Eee-----cCCCeeEE
Q 027609 139 DHLFS--------TIKK--SLKAVVAEVDRILRPDGNLILRDDA-ETIVEVEDLVKSLHWDVR-MIY-----TNDNQGML 201 (221)
Q Consensus 139 ~~v~~--------h~~~--d~~~vL~EmdRVLRPGG~~ii~d~~-~~~~~i~~i~~~l~W~~~-~~~-----~~~~e~~l 201 (221)
+.... |... ....+|.++.|+|||||.|++..-. +....+...++.. +... +.. .++.|.++
T Consensus 98 d~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~~-F~~v~~~kP~asR~~s~E~y~ 176 (191)
T 3dou_A 98 DAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRKN-FSSYKISKPPASRGSSSEIYI 176 (191)
T ss_dssp CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGGG-EEEEEEECC------CCEEEE
T ss_pred CCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHHh-cCEEEEECCCCccCCCceEEE
Confidence 74321 1110 2467899999999999999987432 2234455555443 4332 211 34589999
Q ss_pred EEEec
Q 027609 202 CVHKT 206 (221)
Q Consensus 202 ~~~K~ 206 (221)
||++-
T Consensus 177 v~~~~ 181 (191)
T 3dou_A 177 MFFGF 181 (191)
T ss_dssp EEEEE
T ss_pred EEeee
Confidence 99873
No 151
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.19 E-value=1.2e-11 Score=102.51 Aligned_cols=94 Identities=15% Similarity=0.123 Sum_probs=70.5
Q ss_pred CCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCc----cc-eeccccccCCCCCCccCeeeeccc
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGL----FG-LYHDWCESFNTYPRTYDLLHADHL 141 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl----~~-~~~d~~e~f~~yp~sFDlVh~~~v 141 (221)
.....+|||+|||+|.++..|++.+. +++++|.+ .+++.+.++.- +. ...|..+.+ +.+++||+|.|..+
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~~ 143 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIVD---KVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGY-EEEKPYDRVVVWAT 143 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCC-GGGCCEEEEEESSB
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHcC---EEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccccc-ccCCCccEEEECCc
Confidence 34467999999999999999998762 57888886 58888887721 11 223433211 12389999999999
Q ss_pred cccccccHHHHHHHhhhhccCCeEEEEEcCh
Q 027609 142 FSTIKKSLKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 142 ~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
++|+. + ++.|+|||||.+++....
T Consensus 144 ~~~~~-~------~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 144 APTLL-C------KPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp BSSCC-H------HHHHTEEEEEEEEEEECS
T ss_pred HHHHH-H------HHHHHcCCCcEEEEEEcC
Confidence 98877 2 788999999999999764
No 152
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.19 E-value=3.2e-11 Score=121.22 Aligned_cols=99 Identities=12% Similarity=0.144 Sum_probs=76.4
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----------Cccc--e-eccccccCCCCC-CccC
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----------GLFG--L-YHDWCESFNTYP-RTYD 134 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----------Gl~~--~-~~d~~e~f~~yp-~sFD 134 (221)
...+|||+|||+|.++..|++++....+|+++|.+ .|++.|.+| |+.. . ..|. +.++ ++ ++||
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa-~dLp-~~d~sFD 798 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI-LEFD-SRLHDVD 798 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT-TSCC-TTSCSCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECch-HhCC-cccCCee
Confidence 57899999999999999999986322367999987 599988773 3322 2 2343 2243 45 9999
Q ss_pred eeeeccccccccccHH--HHHHHhhhhccCCeEEEEEcCh
Q 027609 135 LLHADHLFSTIKKSLK--AVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 135 lVh~~~v~~h~~~d~~--~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
+|.|..+++|+. ++. .++.|+.|+|||| .+++++.+
T Consensus 799 lVV~~eVLeHL~-dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 799 IGTCLEVIEHME-EDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp EEEEESCGGGSC-HHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred EEEEeCchhhCC-hHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 999999999999 554 5999999999999 88888654
No 153
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.19 E-value=6.9e-12 Score=99.88 Aligned_cols=99 Identities=17% Similarity=0.207 Sum_probs=71.0
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Ccc---ce-eccccccCCCCCCccCeeeecc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLF---GL-YHDWCESFNTYPRTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~---~~-~~d~~e~f~~yp~sFDlVh~~~ 140 (221)
...+|||+|||+|.++..|++++.. +++++|.+ .+++.+.++ |+. .. ..|+.+.++.++++||+|.++.
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSRGMS--AAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTTCC--EEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 3678999999999999999988642 57899986 588877664 332 12 2343332222457899999987
Q ss_pred ccccccccHHHHHHHhh--hhccCCeEEEEEcCh
Q 027609 141 LFSTIKKSLKAVVAEVD--RILRPDGNLILRDDA 172 (221)
Q Consensus 141 v~~h~~~d~~~vL~Emd--RVLRPGG~~ii~d~~ 172 (221)
.++. . +...++.++. |+|||||.+++....
T Consensus 109 ~~~~-~-~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 109 PYAK-E-TIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp SSHH-H-HHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCCc-c-hHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 7642 2 4566777776 999999999998655
No 154
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.18 E-value=2e-11 Score=99.70 Aligned_cols=94 Identities=17% Similarity=0.068 Sum_probs=70.4
Q ss_pred CCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc--e-eccccccCCCCCCccCeeeec
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG--L-YHDWCESFNTYPRTYDLLHAD 139 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~-~~d~~e~f~~yp~sFDlVh~~ 139 (221)
.....+|||+|||+|.++..|++.+. +++++|.+ ++++.+.++ |+.. . ..|..+ ..+-+++||+|.++
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~D~i~~~ 150 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHLVQ---HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQ-GWQARAPFDAIIVT 150 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG-CCGGGCCEEEEEES
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCC---EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCccc-CCccCCCccEEEEc
Confidence 34578999999999999999998853 56888886 588877765 4332 2 234332 11113899999999
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEEcCh
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
.+++|+. + ++.|+|||||++++....
T Consensus 151 ~~~~~~~-~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 151 AAPPEIP-T------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp SBCSSCC-T------HHHHTEEEEEEEEEEECS
T ss_pred cchhhhh-H------HHHHhcccCcEEEEEEcC
Confidence 9999888 3 688999999999998655
No 155
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.18 E-value=2.8e-11 Score=107.75 Aligned_cols=100 Identities=19% Similarity=0.092 Sum_probs=59.9
Q ss_pred CCCeEEeecCcchHHHHHHhhCC-CeEEEeccCCCCCCHHHHH-H-cCccc--eeccccccCCCCC-CccCeeeeccccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLK-VWVMNVVPIESPDTLPIIY-E-RGLFG--LYHDWCESFNTYP-RTYDLLHADHLFS 143 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~-v~vmnv~~~d~~~~l~~a~-e-RGl~~--~~~d~~e~f~~yp-~sFDlVh~~~v~~ 143 (221)
...+|||+|||+|+++..|++++ |..+++..+..+.++..+. + .|..+ .+.+ . .+..+| .+||+|.|+..++
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~-D~~~l~~~~fD~V~sd~~~~ 159 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSG-V-DVFFIPPERCDTLLCDIGES 159 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECS-C-CTTTSCCCCCSEEEECCCCC
T ss_pred CCCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHHhhhcCCCCeEEEec-c-ccccCCcCCCCEEEECCccc
Confidence 36799999999999999999883 2222331111122222111 1 12222 2221 0 122344 8999999987653
Q ss_pred --cccccHH---HHHHHhhhhccCCeEEEEEcC
Q 027609 144 --TIKKSLK---AVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 144 --h~~~d~~---~vL~EmdRVLRPGG~~ii~d~ 171 (221)
|+..+.. .+|.++.|+|||||.|++...
T Consensus 160 ~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 160 SPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred cCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 2211222 589999999999999999744
No 156
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.18 E-value=7.3e-13 Score=110.73 Aligned_cols=95 Identities=16% Similarity=0.181 Sum_probs=73.0
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc---ccee-ccccccCCCCCCccCeeeecc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL---FGLY-HDWCESFNTYPRTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl---~~~~-~d~~e~f~~yp~sFDlVh~~~ 140 (221)
...+|||+|||+|.++..|++++. +|+++|.+ .+++.+.++ |+ +..+ .|..+ ++ .+++||+|.|+.
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~-~~~~~D~v~~~~ 152 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGM---RVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLL-LA-SFLKADVVFLSP 152 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH-HG-GGCCCSEEEECC
T ss_pred CCCEEEECccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHH-hc-ccCCCCEEEECC
Confidence 467999999999999999999873 57889986 488777655 33 1222 34322 22 238999999999
Q ss_pred ccccccccHHHHHHHhhhhccCCeEEEEEc
Q 027609 141 LFSTIKKSLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
.++|.. ++...+.|+.|+|||||++++..
T Consensus 153 ~~~~~~-~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 153 PWGGPD-YATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp CCSSGG-GGGSSSBCTTTSCSSCHHHHHHH
T ss_pred CcCCcc-hhhhHHHHHHhhcCCcceeHHHH
Confidence 999877 66668899999999999988775
No 157
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.18 E-value=5.5e-12 Score=98.80 Aligned_cols=97 Identities=13% Similarity=0.114 Sum_probs=68.9
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc-ccee-ccccccCCCCC---CccCeeeec
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL-FGLY-HDWCESFNTYP---RTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl-~~~~-~d~~e~f~~yp---~sFDlVh~~ 139 (221)
...+|||+|||+|.++..|++++.. ++++|.+ ++++.+.++ |+ +..+ .|..+.++.++ .+||+|.|+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE---AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE---EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe---EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 3578999999999999999998653 7899986 588877764 22 1122 23322111122 389999999
Q ss_pred cccccccccHHHHHHHhh--hhccCCeEEEEEcCh
Q 027609 140 HLFSTIKKSLKAVVAEVD--RILRPDGNLILRDDA 172 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~Emd--RVLRPGG~~ii~d~~ 172 (221)
..++ . +...++.++. |+|||||.+++....
T Consensus 118 ~~~~--~-~~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 118 PPYA--M-DLAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp CCTT--S-CTTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred CCCc--h-hHHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 8775 3 4456666666 999999999998654
No 158
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.18 E-value=8e-12 Score=109.95 Aligned_cols=94 Identities=14% Similarity=0.076 Sum_probs=59.9
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHcCcc------c--e---eccccccCCCCCCccCeeee
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYERGLF------G--L---YHDWCESFNTYPRTYDLLHA 138 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eRGl~------~--~---~~d~~e~f~~yp~sFDlVh~ 138 (221)
...+|||+|||+|+++..|++++ .|+++|.+.|+..+.++... + . ..|. +.++ +++||+|.|
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~~----~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~-~~l~--~~~fD~Vvs 154 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQP----NVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDV-TKME--PFQADTVLC 154 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTST----TEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCG-GGCC--CCCCSEEEE
T ss_pred CCCEEEEeccCCCHHHHHHHHcC----CEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcH-hhCC--CCCcCEEEE
Confidence 46799999999999999999872 23555554343222222211 1 2 2232 2222 489999999
Q ss_pred ccccccccc---cHH---HHHHHhhhhccCCe--EEEEEcC
Q 027609 139 DHLFSTIKK---SLK---AVVAEVDRILRPDG--NLILRDD 171 (221)
Q Consensus 139 ~~v~~h~~~---d~~---~vL~EmdRVLRPGG--~~ii~d~ 171 (221)
+.. .+... +.. .+|.++.|+||||| .|++..-
T Consensus 155 d~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~ 194 (276)
T 2wa2_A 155 DIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVL 194 (276)
T ss_dssp CCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred CCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeC
Confidence 866 22210 111 48999999999999 9998743
No 159
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.18 E-value=3.6e-11 Score=103.81 Aligned_cols=135 Identities=13% Similarity=0.111 Sum_probs=81.1
Q ss_pred CCCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCCC-C----HHHHHHcCc-cceeccccccC--CCCCCccCeeee
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESPD-T----LPIIYERGL-FGLYHDWCESF--NTYPRTYDLLHA 138 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~~-~----l~~a~eRGl-~~~~~d~~e~f--~~yp~sFDlVh~ 138 (221)
.....+|||+|||+|+++..|++. +-. ..|+++|.+. | ++.+.+|.- .-...|..... ...+.+||+|.|
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~-G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~ 152 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELN-GKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYV 152 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTT-SEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCC-CEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEe
Confidence 445789999999999999998875 111 1467778753 4 345555532 22345533221 112479999999
Q ss_pred ccccccccccHHHHH-HHhhhhccCCeEEEEEcC----------hhhHHHHHHHHHhcCCeEEEe-ec---CCCeeEEEE
Q 027609 139 DHLFSTIKKSLKAVV-AEVDRILRPDGNLILRDD----------AETIVEVEDLVKSLHWDVRMI-YT---NDNQGMLCV 203 (221)
Q Consensus 139 ~~v~~h~~~d~~~vL-~EmdRVLRPGG~~ii~d~----------~~~~~~i~~i~~~l~W~~~~~-~~---~~~e~~l~~ 203 (221)
+..+ + +...+| ..+.|+|||||.++++-. .+..+.+...+++-..+..-. +- +.+.-++++
T Consensus 153 d~a~---~-~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~p~~~~h~~v~~ 228 (232)
T 3id6_C 153 DIAQ---P-DQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLDPYDKDHAIVLS 228 (232)
T ss_dssp CCCC---T-THHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEECTTTCSSCEEEEE
T ss_pred cCCC---h-hHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEeccCCCcCceEEEEE
Confidence 8544 3 444554 456669999999998721 112233444455545554322 11 346778888
Q ss_pred Eecc
Q 027609 204 HKTY 207 (221)
Q Consensus 204 ~K~~ 207 (221)
+|++
T Consensus 229 ~~~~ 232 (232)
T 3id6_C 229 KYKG 232 (232)
T ss_dssp EEC-
T ss_pred EeCC
Confidence 8863
No 160
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.18 E-value=8.3e-11 Score=97.51 Aligned_cols=132 Identities=14% Similarity=0.129 Sum_probs=80.4
Q ss_pred CCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHcC--ccc---eecccccc--CCCCCCccCeeeec
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYERG--LFG---LYHDWCES--FNTYPRTYDLLHAD 139 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eRG--l~~---~~~d~~e~--f~~yp~sFDlVh~~ 139 (221)
....+|||+|||+|.++..|+++ +.. ..++++|.+ .+++.+.++. ..+ ...|..+. +.+++.+||+|.++
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~-~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWE-GKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCC-eEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 34679999999999999999876 211 146777876 3666554431 111 22343221 12245799999987
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEEcChh-----------hHHHHHHHHHhcCCeEEEe-ec---CCCeeEEEEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILRDDAE-----------TIVEVEDLVKSLHWDVRMI-YT---NDNQGMLCVH 204 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~-----------~~~~i~~i~~~l~W~~~~~-~~---~~~e~~l~~~ 204 (221)
.. .+.....++.++.|+|||||++++.-... ..+.++.+ ..- ++.... +- +...-+++++
T Consensus 151 ~~---~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~~~~~~~~~~~~~~~~~ 225 (227)
T 1g8a_A 151 VA---QPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY-FEVIERLNLEPYEKDHALFVVR 225 (227)
T ss_dssp CC---STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEEEECTTTSSSEEEEEEE
T ss_pred CC---CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeEeccCcccCCCEEEEEE
Confidence 54 22134456999999999999999962111 12456665 443 776432 21 2235577777
Q ss_pred ec
Q 027609 205 KT 206 (221)
Q Consensus 205 K~ 206 (221)
|+
T Consensus 226 ~~ 227 (227)
T 1g8a_A 226 KT 227 (227)
T ss_dssp CC
T ss_pred eC
Confidence 63
No 161
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.17 E-value=4.6e-11 Score=103.90 Aligned_cols=119 Identities=13% Similarity=0.051 Sum_probs=82.4
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCC-C-CCHHHHHHcC---------c-------cce-eccccccCCCC-
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIES-P-DTLPIIYERG---------L-------FGL-YHDWCESFNTY- 129 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~-~-~~l~~a~eRG---------l-------~~~-~~d~~e~f~~y- 129 (221)
...+|||+|||+|.++..|+..+.. .|+++|. + .+++.+.++. + +.+ ..+|++....+
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~~~~--~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLAGAD--QVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTTCS--EEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred CCCeEEEecccccHHHHHHHHcCCC--EEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 4679999999999999999988742 4788888 5 5888776652 1 111 23565432222
Q ss_pred ----CCccCeeeeccccccccccHHHHHHHhhhhcc---C--CeEEEEE--cChhh----HHHHHHHHHhcC-CeEEE
Q 027609 130 ----PRTYDLLHADHLFSTIKKSLKAVVAEVDRILR---P--DGNLILR--DDAET----IVEVEDLVKSLH-WDVRM 191 (221)
Q Consensus 130 ----p~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLR---P--GG~~ii~--d~~~~----~~~i~~i~~~l~-W~~~~ 191 (221)
+++||+|.|+.++.|.. +...++.++.|+|| | ||.+++. ...+. ..++.+.+++.. +++..
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~~-~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f~v~~ 233 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFHQ-AHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGALIAEP 233 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCGG-GHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------CTHHHHHHHHSTTEEEEE
T ss_pred hhccCCCCCEEEEeCcccChH-HHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCEEEEE
Confidence 38999999999998877 89999999999999 9 9976554 22211 234444566666 76643
No 162
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.17 E-value=4.1e-11 Score=98.98 Aligned_cols=127 Identities=9% Similarity=0.074 Sum_probs=83.4
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc--ccee-ccccccCCCCC-CccCeeeecc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL--FGLY-HDWCESFNTYP-RTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl--~~~~-~d~~e~f~~yp-~sFDlVh~~~ 140 (221)
...+|||+|||+|.++..++.++.. +|+++|.+ .+++.+.++ |+ +.++ .|..+ +.+++ ++||+|.++.
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~--~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~fD~V~~~~ 130 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAA--GATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMS-FLAQKGTPHNIVFVDP 130 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCS--EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHH-HHSSCCCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCC--EEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHH-HHhhcCCCCCEEEECC
Confidence 3578999999999999998887643 57899987 588877664 33 1222 34322 22344 8999999987
Q ss_pred ccccccccHHHHHHHhhh--hccCCeEEEEEcChhhHHHHHHHHHhcCCeEEEeecCCCeeEEEEEe
Q 027609 141 LFSTIKKSLKAVVAEVDR--ILRPDGNLILRDDAETIVEVEDLVKSLHWDVRMIYTNDNQGMLCVHK 205 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdR--VLRPGG~~ii~d~~~~~~~i~~i~~~l~W~~~~~~~~~~e~~l~~~K 205 (221)
.|+ .. +...++.++.+ +|||||.+++....... +.. ..-.|.......-+...+.+.+|
T Consensus 131 p~~-~~-~~~~~l~~l~~~~~L~pgG~l~i~~~~~~~--~~~--~~~~~~~~~~~~~g~~~~~~~~~ 191 (202)
T 2fpo_A 131 PFR-RG-LLEETINLLEDNGWLADEALIYVESEVENG--LPT--VPANWSLHREKVAGQVAYRLYQR 191 (202)
T ss_dssp SSS-TT-THHHHHHHHHHTTCEEEEEEEEEEEEGGGC--SCC--CCTTEEEEEEEEETTEEEEEEEE
T ss_pred CCC-CC-cHHHHHHHHHhcCccCCCcEEEEEECCCcc--ccc--cCCcceEEeeeccCCEEEEEEEE
Confidence 754 33 67788888854 79999999998765321 100 01246654333334566666654
No 163
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.17 E-value=4e-11 Score=100.48 Aligned_cols=113 Identities=15% Similarity=0.090 Sum_probs=81.4
Q ss_pred CCCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHc-----Cccc--e-eccccccCCCCC-CccCee
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYER-----GLFG--L-YHDWCESFNTYP-RTYDLL 136 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eR-----Gl~~--~-~~d~~e~f~~yp-~sFDlV 136 (221)
.....+|||+|||+|.++..|++. +-. .+++.+|.+ ++++.+.++ |... . ..|..+ + +++ ++||+|
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~-~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~-~~~~~~~D~v 170 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEK-GLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEE-A-ELEEAAYDGV 170 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGG-C-CCCTTCEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhh-c-CCCCCCcCEE
Confidence 345779999999999999999886 211 146888875 588877766 5322 2 234433 2 366 899999
Q ss_pred eeccccccccccHHHHHHHhhhhccCCeEEEEEcChh-hHHHHHHHHHhcCCeE
Q 027609 137 HADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDAE-TIVEVEDLVKSLHWDV 189 (221)
Q Consensus 137 h~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~-~~~~i~~i~~~l~W~~ 189 (221)
.++ .+ ++..+|.++.|+|||||.+++.+... ...++.+.++...|..
T Consensus 171 ~~~-----~~-~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~ 218 (258)
T 2pwy_A 171 ALD-----LM-EPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFRL 218 (258)
T ss_dssp EEE-----SS-CGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEE
T ss_pred EEC-----Cc-CHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCce
Confidence 984 45 67899999999999999999998764 4555655666666654
No 164
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.17 E-value=2.4e-11 Score=107.08 Aligned_cols=100 Identities=18% Similarity=0.209 Sum_probs=73.5
Q ss_pred CCeEEeecCcchH----HHHHHhhC-CCe--EEEeccCCCC-CCHHHHHHcCc------------------------cc-
Q 027609 71 VRNVMDMRAVYGG----FAAALKDL-KVW--VMNVVPIESP-DTLPIIYERGL------------------------FG- 117 (221)
Q Consensus 71 ~r~VLD~GcG~G~----faa~L~~~-~v~--vmnv~~~d~~-~~l~~a~eRGl------------------------~~- 117 (221)
..+|||+|||+|. +|..|++. +.. ...|+++|.+ ++|+.|.+.-. .|
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 4689999999997 66666654 310 1278999997 59999876410 00
Q ss_pred -------------eeccccccCCCCC--CccCeeeeccccccccc-cHHHHHHHhhhhccCCeEEEEEcCh
Q 027609 118 -------------LYHDWCESFNTYP--RTYDLLHADHLFSTIKK-SLKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 118 -------------~~~d~~e~f~~yp--~sFDlVh~~~v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
..||+.+ ++|| +.||+|.|..+++|+.. ....++.++.++|||||++++....
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~--~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~sE 254 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLE--KQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGHSE 254 (274)
T ss_dssp EEECHHHHTTEEEEECCTTC--SSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECTTC
T ss_pred eeechhhcccCeEEecccCC--CCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEecc
Confidence 1355544 2354 78999999999998873 3489999999999999999997543
No 165
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.16 E-value=2.8e-11 Score=106.15 Aligned_cols=127 Identities=10% Similarity=0.197 Sum_probs=91.2
Q ss_pred CCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc---e-eccccccCCCCCCcc---Ceeee
Q 027609 71 VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG---L-YHDWCESFNTYPRTY---DLLHA 138 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~---~-~~d~~e~f~~yp~sF---DlVh~ 138 (221)
..+|||+|||+|.++..|++.+. .+++++|.+ ++++.+.++ |+.+ . ..|+.+ +++.+| |+|.|
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~~~--~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~---~~~~~f~~~D~Ivs 198 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKFSD--AIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLE---PFKEKFASIEMILS 198 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHHSS--CEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTG---GGGGGTTTCCEEEE
T ss_pred CCEEEEEeCchhHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchh---hcccccCCCCEEEE
Confidence 46899999999999999988722 257889986 588877765 4422 2 235433 334789 99999
Q ss_pred c------------cccccccc-------cHHHHHHHhh-hhccCCeEEEEEcChhhHHHHHHHHHhcCCeEEEeecCCCe
Q 027609 139 D------------HLFSTIKK-------SLKAVVAEVD-RILRPDGNLILRDDAETIVEVEDLVKSLHWDVRMIYTNDNQ 198 (221)
Q Consensus 139 ~------------~v~~h~~~-------d~~~vL~Emd-RVLRPGG~~ii~d~~~~~~~i~~i~~~l~W~~~~~~~~~~e 198 (221)
+ .+. |.+. |...++.++. ++|+|||++++.-.....+.+.++++.. ....|-.+.+
T Consensus 199 nPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q~~~v~~~~~~~---~~~~D~~g~~ 274 (284)
T 1nv8_A 199 NPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQVEELKKIVSDT---VFLKDSAGKY 274 (284)
T ss_dssp CCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTCHHHHTTTSTTC---EEEECTTSSE
T ss_pred cCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHHhC---CeecccCCCc
Confidence 7 222 2221 2347899999 9999999999987666677787777665 3355666788
Q ss_pred eEEEEEec
Q 027609 199 GMLCVHKT 206 (221)
Q Consensus 199 ~~l~~~K~ 206 (221)
++++++++
T Consensus 275 R~~~~~~k 282 (284)
T 1nv8_A 275 RFLLLNRR 282 (284)
T ss_dssp EEEEEECC
T ss_pred eEEEEEEc
Confidence 99988775
No 166
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.15 E-value=9.6e-11 Score=103.50 Aligned_cols=136 Identities=18% Similarity=0.172 Sum_probs=88.9
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC------c----cce-eccccccCCC-C-CCccC
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG------L----FGL-YHDWCESFNT-Y-PRTYD 134 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG------l----~~~-~~d~~e~f~~-y-p~sFD 134 (221)
....+|||+|||.|+++..|+++.- +.+++.+|.+ .+++.+.++- + +.+ ..|..+ +.. . +++||
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~fD 171 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGT-VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLA-FVRQTPDNTYD 171 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH-HHHSSCTTCEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHH-HHHhccCCcee
Confidence 3468999999999999999998731 2257888886 5888887762 1 112 233222 221 1 48999
Q ss_pred eeeeccccccccc-cH--HHHHHHhhhhccCCeEEEEEcCh-----hhHHHHHHHHHhcCCeEEEee-------cCCCee
Q 027609 135 LLHADHLFSTIKK-SL--KAVVAEVDRILRPDGNLILRDDA-----ETIVEVEDLVKSLHWDVRMIY-------TNDNQG 199 (221)
Q Consensus 135 lVh~~~v~~h~~~-d~--~~vL~EmdRVLRPGG~~ii~d~~-----~~~~~i~~i~~~l~W~~~~~~-------~~~~e~ 199 (221)
+|.++....+.+. .. ..++.++.|+|||||.+++.... .....+.+.+++..+...... ..+.-.
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w~ 251 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALMHVPTYPCGSIG 251 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCCE
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEeecccccCcceE
Confidence 9999755443331 11 68999999999999999997543 245667777777767543222 124457
Q ss_pred EEEEEec
Q 027609 200 MLCVHKT 206 (221)
Q Consensus 200 ~l~~~K~ 206 (221)
+++|.|.
T Consensus 252 f~~as~~ 258 (304)
T 3bwc_A 252 TLVCSKK 258 (304)
T ss_dssp EEEEESS
T ss_pred EEEEeCC
Confidence 8889986
No 167
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.15 E-value=6.3e-12 Score=117.46 Aligned_cols=121 Identities=12% Similarity=0.139 Sum_probs=81.3
Q ss_pred hhhccc-CCCCCCCeEEeecCc------chHHHHHHhhC---CCeEEEeccCCCC-CCHHHHHHcCccceeccccccCCC
Q 027609 60 YLNGMG-INWSFVRNVMDMRAV------YGGFAAALKDL---KVWVMNVVPIESP-DTLPIIYERGLFGLYHDWCESFNT 128 (221)
Q Consensus 60 Y~~~L~-i~~~~~r~VLD~GcG------~G~faa~L~~~---~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~d~~e~f~~ 128 (221)
|...|+ +. .+..+|||+||| +|+.+..++++ +. .|+++|.+ +|.. ....+-=...|. +.++.
T Consensus 206 Ye~lL~~l~-~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a---~V~GVDiSp~m~~--~~~rI~fv~GDa-~dlpf 278 (419)
T 3sso_A 206 YDRHFRDYR-NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRG---QIYGLDIMDKSHV--DELRIRTIQGDQ-NDAEF 278 (419)
T ss_dssp HHHHHGGGT-TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTC---EEEEEESSCCGGG--CBTTEEEEECCT-TCHHH
T ss_pred HHHHHHhhc-CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCC---EEEEEECCHHHhh--cCCCcEEEEecc-cccch
Confidence 666665 32 246899999999 67766666653 22 56888886 4531 111111123442 22221
Q ss_pred C------CCccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEEcCh------------------hhHHHHHHHHHh
Q 027609 129 Y------PRTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA------------------ETIVEVEDLVKS 184 (221)
Q Consensus 129 y------p~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~------------------~~~~~i~~i~~~ 184 (221)
. +++||+|+|.. .+++. ++..+|.|+.|+|||||++++.|.. .+++.+++++..
T Consensus 279 ~~~l~~~d~sFDlVisdg-sH~~~-d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~ 356 (419)
T 3sso_A 279 LDRIARRYGPFDIVIDDG-SHINA-HVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDA 356 (419)
T ss_dssp HHHHHHHHCCEEEEEECS-CCCHH-HHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHH
T ss_pred hhhhhcccCCccEEEECC-cccch-hHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHHHHHHHH
Confidence 1 38999999974 34455 8999999999999999999998643 247888899888
Q ss_pred cCCeE
Q 027609 185 LHWDV 189 (221)
Q Consensus 185 l~W~~ 189 (221)
++|..
T Consensus 357 l~~~~ 361 (419)
T 3sso_A 357 IQHQE 361 (419)
T ss_dssp HTGGG
T ss_pred hcccc
Confidence 88764
No 168
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.15 E-value=3.8e-11 Score=104.04 Aligned_cols=101 Identities=15% Similarity=0.072 Sum_probs=70.3
Q ss_pred CCCCCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHc----Cc-cceeccccccC-CCCC-CccCee
Q 027609 66 INWSFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYER----GL-FGLYHDWCESF-NTYP-RTYDLL 136 (221)
Q Consensus 66 i~~~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eR----Gl-~~~~~d~~e~f-~~yp-~sFDlV 136 (221)
+.-....+|||+|||+|.++..|++. |- ...|.++|.+ +|++.+.++ +. ..+..|.+.+- .++. .++|+|
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~-~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvV 151 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGP-RGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGL 151 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCT-TCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEE
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEE
Confidence 33445889999999999999999886 21 1246778876 577766554 22 22444433321 1234 899999
Q ss_pred eeccccccccccHHHHHHHhhhhccCCeEEEEEc
Q 027609 137 HADHLFSTIKKSLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 137 h~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
+|. +.|-. ++..++.|+.|+|||||.+++.+
T Consensus 152 f~d--~~~~~-~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 152 YAD--VAQPE-QAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp EEC--CCCTT-HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEe--ccCCh-hHHHHHHHHHHhccCCCEEEEEE
Confidence 875 33333 78899999999999999999973
No 169
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.14 E-value=7.3e-11 Score=105.02 Aligned_cols=96 Identities=15% Similarity=0.157 Sum_probs=69.8
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHc----Cccc---eeccccccCCCCC-CccCeeeeccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYER----GLFG---LYHDWCESFNTYP-RTYDLLHADHL 141 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eR----Gl~~---~~~d~~e~f~~yp-~sFDlVh~~~v 141 (221)
+..+|||+|||+|.++..+++.+.. +|+++|.+.+++.+.++ |+.+ +++.-.+.+ ++| ++||+|.|..+
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~g~~--~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~Ivs~~~ 114 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKHGAK--HVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDV-HLPFPKVDIIISEWM 114 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTCCS--EEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS-CCSSSCEEEEEECCC
T ss_pred CCCEEEEecCccHHHHHHHHHCCCC--EEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhc-cCCCCcccEEEEeCc
Confidence 3678999999999999999988753 46777776677766654 4422 233212223 366 89999999854
Q ss_pred ccccc--ccHHHHHHHhhhhccCCeEEEE
Q 027609 142 FSTIK--KSLKAVVAEVDRILRPDGNLIL 168 (221)
Q Consensus 142 ~~h~~--~d~~~vL~EmdRVLRPGG~~ii 168 (221)
..++. .++..++.+++|+|||||.++.
T Consensus 115 ~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 115 GYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp BTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 43322 2788999999999999999984
No 170
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.14 E-value=1.8e-10 Score=105.12 Aligned_cols=113 Identities=10% Similarity=0.085 Sum_probs=74.2
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc---eeccccccCCCCC-CccCeeeecc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG---LYHDWCESFNTYP-RTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~---~~~d~~e~f~~yp-~sFDlVh~~~ 140 (221)
...+|||+|||+|.++..++++.- ...|+++|.+ .+++.+.++ |+.. +-...+..+.+++ ++||+|.|+-
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~fD~Ii~np 300 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNP 300 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCEEEEEECC
T ss_pred CCCeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCeeEEEECC
Confidence 348999999999999999988731 1257888886 477766654 3321 2111122334566 8999999998
Q ss_pred ccccccc----cHHHHHHHhhhhccCCeEEEEEcCh--hhHHHHHHHHH
Q 027609 141 LFSTIKK----SLKAVVAEVDRILRPDGNLILRDDA--ETIVEVEDLVK 183 (221)
Q Consensus 141 v~~h~~~----d~~~vL~EmdRVLRPGG~~ii~d~~--~~~~~i~~i~~ 183 (221)
.|++... ....+|.++.|+|||||.+++.... .+...+++.+.
T Consensus 301 pfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~~l~~~fg 349 (375)
T 4dcm_A 301 PFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG 349 (375)
T ss_dssp CC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS
T ss_pred CcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCcCHHHHHHHhcC
Confidence 8875321 3347899999999999999997432 23344444433
No 171
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.13 E-value=9.2e-11 Score=99.06 Aligned_cols=130 Identities=15% Similarity=0.128 Sum_probs=87.3
Q ss_pred CCeEEeecCcchHHHHHHhhC---CCeEEEeccCCCC-CCHHHHHHc----Ccc-c---e-eccccccCCCC-CCccCee
Q 027609 71 VRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESP-DTLPIIYER----GLF-G---L-YHDWCESFNTY-PRTYDLL 136 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~---~v~vmnv~~~d~~-~~l~~a~eR----Gl~-~---~-~~d~~e~f~~y-p~sFDlV 136 (221)
..+|||+|||+|.++..|++. +. .++.+|.+ ++++.+.++ |+. . + ..|..+.++.+ +++||+|
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V 133 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNT---TLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLV 133 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTS---EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeE
Confidence 449999999999999999874 22 46888886 477766554 443 2 2 22333333345 4899999
Q ss_pred eeccccccccccHHHHHHHhhhhccCCeEEEEEcCh------------hhHHHHHHHHHhcCCeEE--EeecCCCeeEEE
Q 027609 137 HADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA------------ETIVEVEDLVKSLHWDVR--MIYTNDNQGMLC 202 (221)
Q Consensus 137 h~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~------------~~~~~i~~i~~~l~W~~~--~~~~~~~e~~l~ 202 (221)
.+..... +...++.++.|+|||||++++.+.. .....+.++...+++.-. ...-.-.+.+++
T Consensus 134 ~~d~~~~----~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdGl~~ 209 (221)
T 3dr5_A 134 FGQVSPM----DLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHVARLPLGAGLTV 209 (221)
T ss_dssp EECCCTT----THHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEEEESSTTCEEE
T ss_pred EEcCcHH----HHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEEEeeccchHHH
Confidence 9875433 4567899999999999999997542 123355666666666522 111223678999
Q ss_pred EEecc
Q 027609 203 VHKTY 207 (221)
Q Consensus 203 ~~K~~ 207 (221)
++|.+
T Consensus 210 ~~~~~ 214 (221)
T 3dr5_A 210 VTKAL 214 (221)
T ss_dssp EEECC
T ss_pred HHHHH
Confidence 99875
No 172
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.11 E-value=1.9e-11 Score=97.26 Aligned_cols=99 Identities=16% Similarity=0.208 Sum_probs=70.6
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc---ccee-ccccccCCC--C-CCccCeee
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL---FGLY-HDWCESFNT--Y-PRTYDLLH 137 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl---~~~~-~d~~e~f~~--y-p~sFDlVh 137 (221)
...+|||+|||+|.++..+++++.. +++++|.+ .+++.+.++ |+ +..+ .|+.+.++. + +.+||+|.
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRGMD--KSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCEEEeCCccCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 4679999999999999998887643 57888886 577776654 33 1222 343331111 2 48999999
Q ss_pred eccccccccccHHHHHHHh--hhhccCCeEEEEEcCh
Q 027609 138 ADHLFSTIKKSLKAVVAEV--DRILRPDGNLILRDDA 172 (221)
Q Consensus 138 ~~~v~~h~~~d~~~vL~Em--dRVLRPGG~~ii~d~~ 172 (221)
++..++ .. +...++.++ .|+|||||++++....
T Consensus 122 ~~~~~~-~~-~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 122 LDPPYA-KQ-EIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp ECCCGG-GC-CHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred ECCCCC-ch-hHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 987764 23 567777777 9999999999998654
No 173
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.11 E-value=2.5e-10 Score=95.38 Aligned_cols=130 Identities=13% Similarity=0.081 Sum_probs=80.6
Q ss_pred CCCeEEeecCcchHHHHHHhhC--CCeEEEeccCCCC-C----CHHHHHHcCccc-eeccccccC-CCC-CCccCeeeec
Q 027609 70 FVRNVMDMRAVYGGFAAALKDL--KVWVMNVVPIESP-D----TLPIIYERGLFG-LYHDWCESF-NTY-PRTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~--~v~vmnv~~~d~~-~----~l~~a~eRGl~~-~~~d~~e~f-~~y-p~sFDlVh~~ 139 (221)
...+|||+|||+|.++..|+++ +.. .++++|.+ . +++.+.++.-+. ...|..+.. .++ +++||+|.|+
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~--~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~ 154 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDG--LVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFAD 154 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTC--EEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEEC
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCc--EEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEc
Confidence 4679999999999999999886 211 46788876 2 455555542222 233433211 123 3899999997
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEEcChh-----------hHHHHHHHHHhcCCeEEEe-e---cCCCeeEEEEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILRDDAE-----------TIVEVEDLVKSLHWDVRMI-Y---TNDNQGMLCVH 204 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~-----------~~~~i~~i~~~l~W~~~~~-~---~~~~e~~l~~~ 204 (221)
.. .++....++.++.|+|||||.++++-... +... .+++++..++.... . .....-+++++
T Consensus 155 ~~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~-~~~l~~~Gf~~~~~~~~~~~~~~~~~v~~~ 230 (233)
T 2ipx_A 155 VA---QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASE-VKKMQQENMKPQEQLTLEPYERDHAVVVGV 230 (233)
T ss_dssp CC---CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHH-HHTTGGGTEEEEEEEECTTTSSSEEEEEEE
T ss_pred CC---CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHH-HHHHHHCCCceEEEEecCCccCCcEEEEEE
Confidence 44 12133566888999999999999963321 1222 35566677876532 2 12235566666
Q ss_pred e
Q 027609 205 K 205 (221)
Q Consensus 205 K 205 (221)
|
T Consensus 231 ~ 231 (233)
T 2ipx_A 231 Y 231 (233)
T ss_dssp E
T ss_pred e
Confidence 5
No 174
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.10 E-value=3.2e-10 Score=96.78 Aligned_cols=131 Identities=13% Similarity=0.085 Sum_probs=81.8
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHH----HHHcCccc---e-eccccccCCCC-----CCccCe
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPI----IYERGLFG---L-YHDWCESFNTY-----PRTYDL 135 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~----a~eRGl~~---~-~~d~~e~f~~y-----p~sFDl 135 (221)
..++|||+|||+|..+..|++.--....|+++|.+ ++++. +...|+.. + ..|..+.++.+ +++||+
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 46799999999999999998741001145666663 35443 44445532 2 23432322223 489999
Q ss_pred eeeccccccccccHHHHHHHhhhhccCCeEEEEEcCh------------hhHHHHHHHHHhc----CCeEEEeecCCCee
Q 027609 136 LHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA------------ETIVEVEDLVKSL----HWDVRMIYTNDNQG 199 (221)
Q Consensus 136 Vh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~------------~~~~~i~~i~~~l----~W~~~~~~~~~~e~ 199 (221)
|.+.... .+...++.++.|+|||||++++.+.. +....++++.+.+ ++++.+.. -.++
T Consensus 140 V~~d~~~----~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp--~~dG 213 (242)
T 3r3h_A 140 IFIDADK----TNYLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLLA--IADG 213 (242)
T ss_dssp EEEESCG----GGHHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEES--SSSC
T ss_pred EEEcCCh----HHhHHHHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEEE--ccCc
Confidence 9987542 25678999999999999999997532 1233455544444 34443332 2567
Q ss_pred EEEEEec
Q 027609 200 MLCVHKT 206 (221)
Q Consensus 200 ~l~~~K~ 206 (221)
+++++|+
T Consensus 214 ~~~~~k~ 220 (242)
T 3r3h_A 214 MFLVQPI 220 (242)
T ss_dssp EEEEEEC
T ss_pred eEEEEEc
Confidence 8888874
No 175
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.10 E-value=8.7e-11 Score=99.31 Aligned_cols=99 Identities=13% Similarity=0.159 Sum_probs=71.2
Q ss_pred CCCeEEeecCcchHHHHHHhhC--CCeEEEeccCCCC-CCHHHHHHc-------Cc------------------------
Q 027609 70 FVRNVMDMRAVYGGFAAALKDL--KVWVMNVVPIESP-DTLPIIYER-------GL------------------------ 115 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~--~v~vmnv~~~d~~-~~l~~a~eR-------Gl------------------------ 115 (221)
...+|||+|||+|.++..|+.+ . ...+++++|.+ .+++.|.++ |+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~-~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRR-SLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGG-GEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhcc-CCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 4678999999999999999876 2 13478999986 588877643 22
Q ss_pred ----cc-------------ee-ccccccCCCC------C-CccCeeeecccccccc--------ccHHHHHHHhhhhccC
Q 027609 116 ----FG-------------LY-HDWCESFNTY------P-RTYDLLHADHLFSTIK--------KSLKAVVAEVDRILRP 162 (221)
Q Consensus 116 ----~~-------------~~-~d~~e~f~~y------p-~sFDlVh~~~v~~h~~--------~d~~~vL~EmdRVLRP 162 (221)
+. .. +|..+ ++ + ++||+|.|+-.+.+.. +....++.++.|+|||
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp 206 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFD---PRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPA 206 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTC---GGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCT
T ss_pred hhhhhhhhccccccccccceeeccccc---ccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCC
Confidence 11 22 33322 33 4 5899999986665432 1466899999999999
Q ss_pred CeEEEEEcCh
Q 027609 163 DGNLILRDDA 172 (221)
Q Consensus 163 GG~~ii~d~~ 172 (221)
||++++.+..
T Consensus 207 gG~l~~~~~~ 216 (250)
T 1o9g_A 207 HAVIAVTDRS 216 (250)
T ss_dssp TCEEEEEESS
T ss_pred CcEEEEeCcc
Confidence 9999997554
No 176
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.09 E-value=6.3e-10 Score=98.53 Aligned_cols=136 Identities=16% Similarity=0.195 Sum_probs=84.0
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC-------c----cce-eccccccCCCC-CCccC
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG-------L----FGL-YHDWCESFNTY-PRTYD 134 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG-------l----~~~-~~d~~e~f~~y-p~sFD 134 (221)
.+.++|||+|||+|+++..|+++.- +.+|+.+|.+ .+++++.++- + +.+ ..|..+ +... +++||
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~-~l~~~~~~fD 159 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVN-FVNQTSQTFD 159 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTT-CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC----CCCCCEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHH-HHhhcCCCcc
Confidence 4578999999999999999998731 2257888875 5899887751 1 112 234322 2223 38999
Q ss_pred eeeecccccccccc----HHHHHHHhhhhccCCeEEEEEcCh-----hhHHHHHHHHHhcCCeEEEee----c--CCCee
Q 027609 135 LLHADHLFSTIKKS----LKAVVAEVDRILRPDGNLILRDDA-----ETIVEVEDLVKSLHWDVRMIY----T--NDNQG 199 (221)
Q Consensus 135 lVh~~~v~~h~~~d----~~~vL~EmdRVLRPGG~~ii~d~~-----~~~~~i~~i~~~l~W~~~~~~----~--~~~e~ 199 (221)
+|.++... ++... -..++.++.|+|||||.+++.... +....+.+.+++.--.+.... + .+.-.
T Consensus 160 vIi~D~~~-p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~ 238 (294)
T 3adn_A 160 VIISDCTD-PIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMT 238 (294)
T ss_dssp EEEECC-----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEEEECTTSSSSEEE
T ss_pred EEEECCCC-ccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeEEEEEEecccCCCceE
Confidence 99996432 22211 167999999999999999997422 234444444444433333221 1 23457
Q ss_pred EEEEEecc
Q 027609 200 MLCVHKTY 207 (221)
Q Consensus 200 ~l~~~K~~ 207 (221)
+++|.|..
T Consensus 239 f~~as~~~ 246 (294)
T 3adn_A 239 FAWATDND 246 (294)
T ss_dssp EEEEESCT
T ss_pred EEEEeCCc
Confidence 88999875
No 177
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.08 E-value=4.9e-11 Score=97.75 Aligned_cols=95 Identities=19% Similarity=0.106 Sum_probs=69.1
Q ss_pred CCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc--e-eccccccCCCCC--CccCeee
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG--L-YHDWCESFNTYP--RTYDLLH 137 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~-~~d~~e~f~~yp--~sFDlVh 137 (221)
.....+|||+|||+|.++..|++......+++.+|.+ ++++.+.++ |+.. . ..|..+ +++ ++||+|.
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~---~~~~~~~fD~v~ 151 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTL---GYEPLAPYDRIY 151 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGG---CCGGGCCEEEEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc---CCCCCCCeeEEE
Confidence 3446799999999999999998863100156788876 588877765 3322 1 223322 233 7899999
Q ss_pred eccccccccccHHHHHHHhhhhccCCeEEEEEcCh
Q 027609 138 ADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 138 ~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
|..+++|+. .++.|+|||||.+++....
T Consensus 152 ~~~~~~~~~-------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 152 TTAAGPKIP-------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp ESSBBSSCC-------HHHHHTEEEEEEEEEEESS
T ss_pred ECCchHHHH-------HHHHHHcCCCcEEEEEECC
Confidence 999998877 2889999999999998765
No 178
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.08 E-value=7.9e-10 Score=95.01 Aligned_cols=118 Identities=12% Similarity=0.119 Sum_probs=81.7
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc-------Ccc---cee-ccccccC-----CCCC-C
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER-------GLF---GLY-HDWCESF-----NTYP-R 131 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR-------Gl~---~~~-~d~~e~f-----~~yp-~ 131 (221)
...+|||+|||+|.++..|+.+.- ..+++++|.+ ++++.+.++ |+. .++ .|..+.. ..++ +
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred CCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 467899999999999999988731 1367889986 588877765 221 122 2432211 1245 8
Q ss_pred ccCeeeecccccc----------------cc-ccHHHHHHHhhhhccCCeEEEEEcChhhHHHHHHHHHhcCCeE
Q 027609 132 TYDLLHADHLFST----------------IK-KSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDV 189 (221)
Q Consensus 132 sFDlVh~~~v~~h----------------~~-~d~~~vL~EmdRVLRPGG~~ii~d~~~~~~~i~~i~~~l~W~~ 189 (221)
+||+|.|+--+.. .. .+...++.++.|+|||||.+++.-..+...++...++.- |..
T Consensus 115 ~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~-~~~ 188 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAEIIAACGSR-FGG 188 (260)
T ss_dssp CEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHHTTT-EEE
T ss_pred CcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHHHhc-CCc
Confidence 9999999833321 11 157889999999999999999987777777777777663 654
No 179
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.08 E-value=1e-10 Score=99.16 Aligned_cols=91 Identities=13% Similarity=0.166 Sum_probs=68.6
Q ss_pred CCCCeEEeecCcchHHHHHHhhC--CCeEEEeccCCCC-CCHHHHHHcCcc-c-eeccccccCCCCC-CccCeeeecccc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDL--KVWVMNVVPIESP-DTLPIIYERGLF-G-LYHDWCESFNTYP-RTYDLLHADHLF 142 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~--~v~vmnv~~~d~~-~~l~~a~eRGl~-~-~~~d~~e~f~~yp-~sFDlVh~~~v~ 142 (221)
....+|||+|||+|.++..|++. +. +++++|.+ .+++.+.+++-. . ...|. +.+ +++ ++||+|.|..+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-~~~-~~~~~~fD~v~~~~~~ 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEI---TTFGLDVSKVAIKAAAKRYPQVTFCVASS-HRL-PFSDTSMDAIIRIYAP 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTS---EEEEEESCHHHHHHHHHHCTTSEEEECCT-TSC-SBCTTCEEEEEEESCC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCC---eEEEEeCCHHHHHHHHHhCCCcEEEEcch-hhC-CCCCCceeEEEEeCCh
Confidence 35678999999999999999887 43 46888886 599999888521 1 22342 223 355 899999986442
Q ss_pred ccccccHHHHHHHhhhhccCCeEEEEEcCh
Q 027609 143 STIKKSLKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 143 ~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
.++.|+.|+|||||.+++.+..
T Consensus 159 --------~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 159 --------CKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp --------CCHHHHHHHEEEEEEEEEEEEC
T ss_pred --------hhHHHHHHhcCCCcEEEEEEcC
Confidence 3589999999999999998754
No 180
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.07 E-value=6.4e-11 Score=101.01 Aligned_cols=140 Identities=11% Similarity=0.071 Sum_probs=99.8
Q ss_pred hhhhccc-CCCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc-e-eccccccCCCCC
Q 027609 59 SYLNGMG-INWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG-L-YHDWCESFNTYP 130 (221)
Q Consensus 59 ~Y~~~L~-i~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~-~-~~d~~e~f~~yp 130 (221)
.|...++ + ....+|||+|||+|.+|..++...-.+ .+.++|.+ .|++++.++ |+.. + +.|..+. +.+
T Consensus 39 fY~~~~~~l--~~~~~VLDlGCG~GplAl~l~~~~p~a-~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~--~~~ 113 (200)
T 3fzg_A 39 FYTYVFGNI--KHVSSILDFGCGFNPLALYQWNENEKI-IYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD--VYK 113 (200)
T ss_dssp HHHHHHHHS--CCCSEEEEETCTTHHHHHHHHCSSCCC-EEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH--HTT
T ss_pred HHHHHHhhc--CCCCeEEEecCCCCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc--CCC
Confidence 3444443 3 237799999999999999997773333 67999997 599988876 3321 2 1232221 235
Q ss_pred CccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEEcCh-----------hhHHHHHHHHHhcCCeEEEeecCCCee
Q 027609 131 RTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA-----------ETIVEVEDLVKSLHWDVRMIYTNDNQG 199 (221)
Q Consensus 131 ~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~-----------~~~~~i~~i~~~l~W~~~~~~~~~~e~ 199 (221)
.+||+|-+..++||+. +...++..+.+.|||||.||--++. .+....++.+.+=-|.+....- +.|-
T Consensus 114 ~~~DvVLa~k~LHlL~-~~~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~~~~~~-~nEl 191 (200)
T 3fzg_A 114 GTYDVVFLLKMLPVLK-QQDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKILDSKVI-GNEL 191 (200)
T ss_dssp SEEEEEEEETCHHHHH-HTTCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTTSCEEEEEEE-TTEE
T ss_pred CCcChhhHhhHHHhhh-hhHHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCcceeeeeeee-CceE
Confidence 9999999999999994 8889999999999999999998731 2356777778777887754322 3455
Q ss_pred EEEEEe
Q 027609 200 MLCVHK 205 (221)
Q Consensus 200 ~l~~~K 205 (221)
+.+.+|
T Consensus 192 ~y~~~~ 197 (200)
T 3fzg_A 192 VYITSG 197 (200)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 555554
No 181
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.07 E-value=2.4e-10 Score=98.14 Aligned_cols=112 Identities=15% Similarity=0.125 Sum_probs=81.9
Q ss_pred CCCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHc----Cccc----eeccccccCCCCC-CccCee
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYER----GLFG----LYHDWCESFNTYP-RTYDLL 136 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eR----Gl~~----~~~d~~e~f~~yp-~sFDlV 136 (221)
.....+|||+|||+|.++..|+++ +-. .+++.+|.+ ++++.+.++ |+.. ...|..+ .++ ++||+|
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~~D~V 185 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSS-GKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISE---GFDEKDVDAL 185 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTT-CEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGG---CCSCCSEEEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCC-cEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHH---cccCCccCEE
Confidence 344679999999999999999886 311 257888886 588877765 4411 2234433 255 889999
Q ss_pred eeccccccccccHHHHHHHhhhhccCCeEEEEEcCh-hhHHHHHHHHHhcCCeE
Q 027609 137 HADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA-ETIVEVEDLVKSLHWDV 189 (221)
Q Consensus 137 h~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~-~~~~~i~~i~~~l~W~~ 189 (221)
.++ .+ ++..+|.++.|+|||||.+++.+.. ....++.+.++...|..
T Consensus 186 ~~~-----~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~ 233 (277)
T 1o54_A 186 FLD-----VP-DPWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIR 233 (277)
T ss_dssp EEC-----CS-CGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEE
T ss_pred EEC-----Cc-CHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCce
Confidence 984 34 6789999999999999999999874 35666666677777764
No 182
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.07 E-value=1.9e-10 Score=102.13 Aligned_cols=122 Identities=15% Similarity=0.128 Sum_probs=79.4
Q ss_pred CCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc--ee-ccccccCCCCCCccCeeee
Q 027609 67 NWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG--LY-HDWCESFNTYPRTYDLLHA 138 (221)
Q Consensus 67 ~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~~-~d~~e~f~~yp~sFDlVh~ 138 (221)
......+|||+|||+|+++..|++.--....|+++|.+ .+++.+.++ |+.+ ++ .|. ..++.++++||+|.|
T Consensus 115 ~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~-~~~~~~~~~fD~Il~ 193 (315)
T 1ixk_A 115 DPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSS-LHIGELNVEFDKILL 193 (315)
T ss_dssp CCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCG-GGGGGGCCCEEEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECCh-hhcccccccCCEEEE
Confidence 34456799999999999999998741011146888886 477777665 5432 22 342 234334589999998
Q ss_pred ccc------cccccc---------------cHHHHHHHhhhhccCCeEEEEEcCh----hhHHHHHHHHHhcCCeE
Q 027609 139 DHL------FSTIKK---------------SLKAVVAEVDRILRPDGNLILRDDA----ETIVEVEDLVKSLHWDV 189 (221)
Q Consensus 139 ~~v------~~h~~~---------------d~~~vL~EmdRVLRPGG~~ii~d~~----~~~~~i~~i~~~l~W~~ 189 (221)
+-- +.+-++ ....+|.++.|+|||||.++++++. +..+.++.+++...++.
T Consensus 194 d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~~ 269 (315)
T 1ixk_A 194 DAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVEL 269 (315)
T ss_dssp ECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEEE
T ss_pred eCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCEE
Confidence 522 222110 1158999999999999999998653 33455677777655543
No 183
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.06 E-value=1e-10 Score=99.62 Aligned_cols=114 Identities=14% Similarity=0.147 Sum_probs=75.7
Q ss_pred CCeEEeecCcchHHHHHHhhC----CCeEEEeccCCCC-CCHHHHHHcC-ccc-eecccccc--CCCCC-CccCeeeecc
Q 027609 71 VRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESP-DTLPIIYERG-LFG-LYHDWCES--FNTYP-RTYDLLHADH 140 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~----~v~vmnv~~~d~~-~~l~~a~eRG-l~~-~~~d~~e~--f~~yp-~sFDlVh~~~ 140 (221)
..+|||+|||+|.+++.|++. +- ...|+++|.+ .+++.+...+ -+. ...|..+. ++..+ .+||+|++..
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~-~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGI-DCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTC-CCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCC-CCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 469999999999999999875 11 1246788875 4766654221 122 23453331 22223 4799999875
Q ss_pred ccccccccHHHHHHHhhh-hccCCeEEEEEcChhh-----HHHHHHHHHhc--CCeE
Q 027609 141 LFSTIKKSLKAVVAEVDR-ILRPDGNLILRDDAET-----IVEVEDLVKSL--HWDV 189 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdR-VLRPGG~~ii~d~~~~-----~~~i~~i~~~l--~W~~ 189 (221)
. | . +...+|.|+.| +|||||++++.|..+. ...+.++++.. +++.
T Consensus 161 ~--~-~-~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~ 213 (236)
T 2bm8_A 161 A--H-A-NTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSM 213 (236)
T ss_dssp S--C-S-SHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEE
T ss_pred c--h-H-hHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEE
Confidence 4 3 2 67789999998 9999999999875332 23567777766 4554
No 184
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.06 E-value=2.5e-10 Score=94.99 Aligned_cols=107 Identities=11% Similarity=0.179 Sum_probs=77.0
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc---e-eccccccCCCC-C-CccCeee
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG---L-YHDWCESFNTY-P-RTYDLLH 137 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~---~-~~d~~e~f~~y-p-~sFDlVh 137 (221)
....+|||+|||+|.++..|++++. +++.+|.+ ++++.+.++ |+.. . ..|..+ .+ + ++||+|.
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~D~v~ 163 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEVAG---EVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKD---AEVPEGIFHAAF 163 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSS---EEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTT---SCCCTTCBSEEE
T ss_pred CCCCEEEEeCCCccHHHHHHHHhCC---EEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhh---cccCCCcccEEE
Confidence 3467999999999999999988732 57888876 588877765 3311 2 234322 23 5 7899999
Q ss_pred eccccccccccHHHHHHHhhhhccCCeEEEEEcCh-hhHHHHHHHHHhcCCe
Q 027609 138 ADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA-ETIVEVEDLVKSLHWD 188 (221)
Q Consensus 138 ~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~-~~~~~i~~i~~~l~W~ 188 (221)
++ .+ ++..++.++.|+|||||.+++.... ....++...++.. |.
T Consensus 164 ~~-----~~-~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~-f~ 208 (248)
T 2yvl_A 164 VD-----VR-EPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY-FG 208 (248)
T ss_dssp EC-----SS-CGGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT-EE
T ss_pred EC-----Cc-CHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh-CC
Confidence 84 34 6788999999999999999999874 3455555555544 44
No 185
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.06 E-value=1.4e-10 Score=97.35 Aligned_cols=132 Identities=14% Similarity=0.163 Sum_probs=84.1
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc---e-eccccccCC-------------
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG---L-YHDWCESFN------------- 127 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~---~-~~d~~e~f~------------- 127 (221)
...+|||+|||+|.++..|++..-...+++.+|.+ .+++.+.++ |+.+ . ..|..+.++
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 139 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWAS 139 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGT
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccc
Confidence 46799999999999999998762101256788875 477777665 4422 1 122222111
Q ss_pred CC--C-CccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEEcCh------------hhHHHHHH----HHHhcCCe
Q 027609 128 TY--P-RTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA------------ETIVEVED----LVKSLHWD 188 (221)
Q Consensus 128 ~y--p-~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~------------~~~~~i~~----i~~~l~W~ 188 (221)
.| + ++||+|.+..... +...++.++.|+|||||.+++.+.. .....+++ +...-++.
T Consensus 140 ~f~~~~~~fD~I~~~~~~~----~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (239)
T 2hnk_A 140 DFAFGPSSIDLFFLDADKE----NYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKFNELVYNDSLVD 215 (239)
T ss_dssp TTCCSTTCEEEEEECSCGG----GHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEE
T ss_pred cccCCCCCcCEEEEeCCHH----HHHHHHHHHHHHcCCCeEEEEEccccCCcccCccccchHHHHHHHHHHHHhhCCCeE
Confidence 12 2 6899999885433 5568899999999999999998621 11222333 33444566
Q ss_pred EEEeecCCCeeEEEEEecc
Q 027609 189 VRMIYTNDNQGMLCVHKTY 207 (221)
Q Consensus 189 ~~~~~~~~~e~~l~~~K~~ 207 (221)
+....- .+.+.+++|.+
T Consensus 216 ~~~~p~--~~g~~~~~~~~ 232 (239)
T 2hnk_A 216 VSLVPI--ADGVSLVRKRL 232 (239)
T ss_dssp EEEECS--TTCEEEEEECC
T ss_pred EEEEEc--CCceEeeeehh
Confidence 554322 35688888875
No 186
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.05 E-value=1e-10 Score=109.73 Aligned_cols=99 Identities=8% Similarity=0.047 Sum_probs=71.0
Q ss_pred CCCCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHc-----------Cc----ccee-ccccccCCC
Q 027609 67 NWSFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYER-----------GL----FGLY-HDWCESFNT 128 (221)
Q Consensus 67 ~~~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eR-----------Gl----~~~~-~d~~e~f~~ 128 (221)
......+|||+|||+|.++..++.+ +.. .++++|.+ .++++|.+. |+ +.++ .|..+ + +
T Consensus 170 ~l~~gd~VLDLGCGtG~l~l~lA~~~g~~--kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~-l-p 245 (438)
T 3uwp_A 170 KMTDDDLFVDLGSGVGQVVLQVAAATNCK--HHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS-E-E 245 (438)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHCCCS--EEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTS-H-H
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccC-C-c
Confidence 3445788999999999999888754 543 47899987 477777642 43 2222 34222 1 2
Q ss_pred CC---CccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEEcC
Q 027609 129 YP---RTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 129 yp---~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~ 171 (221)
|+ .+||+|.|+..+ +.+ +....|.|+.|+|||||.||+.+.
T Consensus 246 ~~d~~~~aDVVf~Nn~~-F~p-dl~~aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 246 WRERIANTSVIFVNNFA-FGP-EVDHQLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp HHHHHHTCSEEEECCTT-CCH-HHHHHHHHHHTTSCTTCEEEESSC
T ss_pred cccccCCccEEEEcccc-cCc-hHHHHHHHHHHcCCCCcEEEEeec
Confidence 33 479999998654 345 889999999999999999999964
No 187
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.05 E-value=1.1e-10 Score=97.31 Aligned_cols=97 Identities=15% Similarity=0.176 Sum_probs=70.5
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Ccc---ce-eccccccCCCC--CCccCeeee
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLF---GL-YHDWCESFNTY--PRTYDLLHA 138 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~---~~-~~d~~e~f~~y--p~sFDlVh~ 138 (221)
...+|||+|||+|.++..|++..- ..+++.+|.+ .+++.+.++ |+. .. ..|..+.++.. +++||+|.+
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 467999999999999999988621 1257888886 588877776 542 22 23433311222 478999999
Q ss_pred ccccccccccHHHHHHHhhhhccCCeEEEEEcC
Q 027609 139 DHLFSTIKKSLKAVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 139 ~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~ 171 (221)
+...+ +...+|.++.|+|||||.+++.+.
T Consensus 133 ~~~~~----~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 133 DAAKG----QYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp EGGGS----CHHHHHHHHGGGEEEEEEEEEETT
T ss_pred CCCHH----HHHHHHHHHHHHcCCCeEEEEEcC
Confidence 76543 677999999999999999999864
No 188
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.05 E-value=3.9e-10 Score=96.09 Aligned_cols=110 Identities=18% Similarity=0.230 Sum_probs=77.1
Q ss_pred CCCCCeEEeecCcchHHHHHHhhC---CCeEEEeccCCCC-CCHHHHHHc-----C-c---cce-eccccccCCCCC-Cc
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESP-DTLPIIYER-----G-L---FGL-YHDWCESFNTYP-RT 132 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~---~v~vmnv~~~d~~-~~l~~a~eR-----G-l---~~~-~~d~~e~f~~yp-~s 132 (221)
.....+|||+|||+|.++.+|++. +. +++++|.+ ++++.+.++ | + +.. ..|..+ . +++ ++
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~-~-~~~~~~ 171 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAG---QVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD-S-ELPDGS 171 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG-C-CCCTTC
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh-c-CCCCCc
Confidence 345679999999999999999875 22 56888886 588877765 4 1 112 234333 2 355 89
Q ss_pred cCeeeeccccccccccHHHHHHHhhhhccCCeEEEEEcCh-hhHHHHHHHHHh-cCCe
Q 027609 133 YDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA-ETIVEVEDLVKS-LHWD 188 (221)
Q Consensus 133 FDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~-~~~~~i~~i~~~-l~W~ 188 (221)
||+|.++ .. ++..+|.++.|+|||||.+++.... +.+.++...++. .+|.
T Consensus 172 ~D~v~~~-----~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~ 223 (280)
T 1i9g_A 172 VDRAVLD-----ML-APWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWT 223 (280)
T ss_dssp EEEEEEE-----SS-CGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBC
T ss_pred eeEEEEC-----Cc-CHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcC
Confidence 9999984 44 6779999999999999999998765 334444444444 5554
No 189
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.04 E-value=2.1e-10 Score=94.17 Aligned_cols=97 Identities=19% Similarity=0.066 Sum_probs=67.8
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc---ee-ccccccCCCCCCccCeeeecc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG---LY-HDWCESFNTYPRTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~---~~-~d~~e~f~~yp~sFDlVh~~~ 140 (221)
...+|||+|||+|.++..|++.--...+++.+|.+ .+++.+.++ |+.. .+ .|..+.++..++ ||+|.++.
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 35789999999999999998761101256888886 577777654 4322 22 343332233347 99999873
Q ss_pred ccccccccHHHHHHHhhhhccCCeEEEEEcC
Q 027609 141 LFSTIKKSLKAVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~ 171 (221)
. .. +...++.++.|+|||||++++.+.
T Consensus 135 ~---~~-~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 135 D---VF-NGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp T---TS-CHHHHHHHHGGGEEEEEEEEEESS
T ss_pred C---hh-hhHHHHHHHHHhcCCCeEEEEECc
Confidence 2 22 678999999999999999999753
No 190
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.04 E-value=4.4e-10 Score=101.00 Aligned_cols=116 Identities=15% Similarity=0.143 Sum_probs=77.8
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Ccc----cee-ccccccCCCC----CCccCe
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLF----GLY-HDWCESFNTY----PRTYDL 135 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~----~~~-~d~~e~f~~y----p~sFDl 135 (221)
+..+|||+|||+|+|+..++..+. .|+.+|.+ .+++.+.++ |+. ..+ .|..+ +... .++||+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga---~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~-~l~~~~~~~~~fD~ 228 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA---EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMK-FIQREERRGSTYDI 228 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHH-HHHHHHHHTCCBSE
T ss_pred CCCcEEEcccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHH-HHHHHHhcCCCceE
Confidence 456899999999999999999875 57899987 488877665 432 122 23211 2211 368999
Q ss_pred eeecc----------ccccccccHHHHHHHhhhhccCCeEEEEEcCh-------hhHHHHHHHHHhcCCeEE
Q 027609 136 LHADH----------LFSTIKKSLKAVVAEVDRILRPDGNLILRDDA-------ETIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 136 Vh~~~----------v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~-------~~~~~i~~i~~~l~W~~~ 190 (221)
|.++- ++.+.. +...++.++.|+|||||++++.... .+.+.+++.++....++.
T Consensus 229 Ii~dPP~~~~~~~~~~~~~~~-~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 229 ILTDPPKFGRGTHGEVWQLFD-HLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp EEECCCSEEECTTCCEEEHHH-HHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred EEECCccccCCchHHHHHHHH-HHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 99842 222233 6789999999999999997776421 123334444556666654
No 191
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.03 E-value=1.3e-10 Score=102.57 Aligned_cols=96 Identities=16% Similarity=0.046 Sum_probs=69.8
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc--e-eccccccCCCCCCccCeeeecc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG--L-YHDWCESFNTYPRTYDLLHADH 140 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~-~~d~~e~f~~yp~sFDlVh~~~ 140 (221)
....+|||+|||+|.++..|++++....+|+++|.+ ++++.+.++ |+.+ . ..|..+ ..+.+++||+|.|..
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~-~~~~~~~fD~Iv~~~ 152 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYY-GVPEFSPYDVIFVTV 152 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG-CCGGGCCEEEEEECS
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhh-ccccCCCeEEEEEcC
Confidence 346799999999999999998864321246888876 588877766 5433 2 234322 222238999999999
Q ss_pred ccccccccHHHHHHHhhhhccCCeEEEEEcCh
Q 027609 141 LFSTIKKSLKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
+++|+. .++.|+|||||.+++....
T Consensus 153 ~~~~~~-------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 153 GVDEVP-------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp BBSCCC-------HHHHHHEEEEEEEEEEBCB
T ss_pred CHHHHH-------HHHHHhcCCCcEEEEEECC
Confidence 998876 4778999999999998654
No 192
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.02 E-value=4.5e-10 Score=92.79 Aligned_cols=131 Identities=18% Similarity=0.095 Sum_probs=83.2
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Ccc---cee-ccccccCCCCC-----CccCe
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLF---GLY-HDWCESFNTYP-----RTYDL 135 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~---~~~-~d~~e~f~~yp-----~sFDl 135 (221)
...+|||+|||+|.++..|++.--...+++.+|.+ .+++.+.++ |+. ..+ .|..+.++.++ ++||+
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~ 148 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDV 148 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccE
Confidence 46799999999999999998851101256888875 477777655 442 122 23222111121 68999
Q ss_pred eeeccccccccccHHHHHHHhhhhccCCeEEEEEcCh------------hhHHHHHHHH----HhcCCeEEEeecCCCee
Q 027609 136 LHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA------------ETIVEVEDLV----KSLHWDVRMIYTNDNQG 199 (221)
Q Consensus 136 Vh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~------------~~~~~i~~i~----~~l~W~~~~~~~~~~e~ 199 (221)
|.++.... +...++.++.|+|||||.+++.+.. +....++++. ..-++.+.+... .+.
T Consensus 149 v~~d~~~~----~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~--~dG 222 (229)
T 2avd_A 149 AVVDADKE----NCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLPL--GDG 222 (229)
T ss_dssp EEECSCST----THHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEEEEECS--TTC
T ss_pred EEECCCHH----HHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEEEEEec--CCc
Confidence 99975422 5678999999999999999996532 2233344433 334455544322 457
Q ss_pred EEEEEec
Q 027609 200 MLCVHKT 206 (221)
Q Consensus 200 ~l~~~K~ 206 (221)
+++++|.
T Consensus 223 l~~~~k~ 229 (229)
T 2avd_A 223 LTLAFKI 229 (229)
T ss_dssp EEEEEEC
T ss_pred eEEEEEC
Confidence 8888873
No 193
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.01 E-value=2.1e-10 Score=108.08 Aligned_cols=98 Identities=12% Similarity=0.093 Sum_probs=72.0
Q ss_pred CCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHc----Ccc---cee-ccccccCCCCCCccCeeeec
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYER----GLF---GLY-HDWCESFNTYPRTYDLLHAD 139 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eR----Gl~---~~~-~d~~e~f~~yp~sFDlVh~~ 139 (221)
.....+|||+|||+|.++..+++.+.. .|+++|.+.+++.|.++ |+. .++ .|+.+ + ++|.+||+|.|.
T Consensus 156 ~~~~~~VLDiGcGtG~la~~la~~~~~--~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~-~-~~~~~fD~Ivs~ 231 (480)
T 3b3j_A 156 DFKDKIVLDVGCGSGILSFFAAQAGAR--KIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEE-V-SLPEQVDIIISE 231 (480)
T ss_dssp GTTTCEEEEESCSTTHHHHHHHHTTCS--EEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTT-C-CCSSCEEEEECC
T ss_pred hcCCCEEEEecCcccHHHHHHHHcCCC--EEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhh-C-ccCCCeEEEEEe
Confidence 345679999999999999999987642 46778876566665543 552 222 34322 2 356899999998
Q ss_pred cccccccc-cHHHHHHHhhhhccCCeEEEEE
Q 027609 140 HLFSTIKK-SLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 140 ~v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
.++.|+.. +....+.++.|+|||||.+++.
T Consensus 232 ~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 232 PMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp CCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred CchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 87777653 5677888999999999999854
No 194
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.00 E-value=1.1e-10 Score=97.73 Aligned_cols=93 Identities=18% Similarity=0.219 Sum_probs=67.9
Q ss_pred CCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccce---eccccccCCCCC--CccCeee
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFGL---YHDWCESFNTYP--RTYDLLH 137 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~~---~~d~~e~f~~yp--~sFDlVh 137 (221)
.....+|||+|||+|.++..|++... .+++.+|.+ .+++.+.++ |+..+ ..|. ..+++ ..||+|.
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~~~~~~~fD~Ii 163 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG---SKGFPPKAPYDVII 163 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG---GGCCGGGCCEEEEE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc---ccCCCCCCCccEEE
Confidence 34467999999999999999988642 246778875 577777665 33221 2232 23455 4599999
Q ss_pred eccccccccccHHHHHHHhhhhccCCeEEEEEcCh
Q 027609 138 ADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 138 ~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
+..+++++. + ++.|+|||||.+++....
T Consensus 164 ~~~~~~~~~-~------~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 164 VTAGAPKIP-E------PLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp ECSBBSSCC-H------HHHHTEEEEEEEEEEECS
T ss_pred ECCcHHHHH-H------HHHHhcCCCcEEEEEEec
Confidence 999988777 2 788999999999998764
No 195
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.00 E-value=7.5e-10 Score=96.62 Aligned_cols=133 Identities=17% Similarity=0.138 Sum_probs=85.5
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc-----Cc-----------ccee-ccccccCCCCCC
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER-----GL-----------FGLY-HDWCESFNTYPR 131 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR-----Gl-----------~~~~-~d~~e~f~~yp~ 131 (221)
..++|||+|||+|+++..+++++. .+++.+|.+ .+++.+.++ |+ +.++ .|..+.+.. ++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~--~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDV--DEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCC--SEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cC
Confidence 468999999999999999998853 257888876 588888776 22 1111 231111112 68
Q ss_pred ccCeeeeccccccccc--c--HHHHHHHhhhhccCCeEEEEEcC-----hhhHHHHHHHHHhcCCeEEEee-----cCCC
Q 027609 132 TYDLLHADHLFSTIKK--S--LKAVVAEVDRILRPDGNLILRDD-----AETIVEVEDLVKSLHWDVRMIY-----TNDN 197 (221)
Q Consensus 132 sFDlVh~~~v~~h~~~--d--~~~vL~EmdRVLRPGG~~ii~d~-----~~~~~~i~~i~~~l~W~~~~~~-----~~~~ 197 (221)
+||+|.++... ++.. . ...++.++.|+|||||.+++... .+....+.+.++..--.+.... -.+.
T Consensus 152 ~fD~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~g~ 230 (281)
T 1mjf_A 152 GFDVIIADSTD-PVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYSFPVIGYASP 230 (281)
T ss_dssp CEEEEEEECCC-CC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEEECCTTSSSS
T ss_pred CeeEEEECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEEEecCCCCce
Confidence 89999997443 2221 1 26789999999999999999742 2334445444544433333221 1345
Q ss_pred eeEEEEEec
Q 027609 198 QGMLCVHKT 206 (221)
Q Consensus 198 e~~l~~~K~ 206 (221)
-.+++|.|.
T Consensus 231 ~~~~~as~~ 239 (281)
T 1mjf_A 231 WAFLVGVKG 239 (281)
T ss_dssp EEEEEEEES
T ss_pred EEEEEeeCC
Confidence 778999987
No 196
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.00 E-value=3.3e-10 Score=95.42 Aligned_cols=131 Identities=14% Similarity=0.132 Sum_probs=83.5
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc---e-eccccccCCCC---C--CccCe
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG---L-YHDWCESFNTY---P--RTYDL 135 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~---~-~~d~~e~f~~y---p--~sFDl 135 (221)
..++|||+|||+|.++..|++.--....++.+|.+ ++++.+.++ |+.. . ..|..+.++.+ + ++||+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 35799999999999999998861001256788876 477777654 4422 2 22322212212 1 78999
Q ss_pred eeeccccccccccHHHHHHHhhhhccCCeEEEEEcCh------------hhHHHHHHHHHhc----CCeEEEeecCCCee
Q 027609 136 LHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA------------ETIVEVEDLVKSL----HWDVRMIYTNDNQG 199 (221)
Q Consensus 136 Vh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~------------~~~~~i~~i~~~l----~W~~~~~~~~~~e~ 199 (221)
|.+.... . +...++.++.|+|||||++++.+.. +....++++...+ ++.+.+... .+.
T Consensus 152 V~~d~~~---~-~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~--~dG 225 (232)
T 3cbg_A 152 IFIDADK---R-NYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRISVIPL--GDG 225 (232)
T ss_dssp EEECSCG---G-GHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEEEECS--BTC
T ss_pred EEECCCH---H-HHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEEEEEEc--CCe
Confidence 9987542 2 6678999999999999999997532 2234445444433 455443322 356
Q ss_pred EEEEEec
Q 027609 200 MLCVHKT 206 (221)
Q Consensus 200 ~l~~~K~ 206 (221)
+.+++|.
T Consensus 226 ~~~~~~~ 232 (232)
T 3cbg_A 226 MTLALKK 232 (232)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 8888874
No 197
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.00 E-value=2.6e-10 Score=100.87 Aligned_cols=98 Identities=13% Similarity=0.058 Sum_probs=65.8
Q ss_pred CCCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHcCc-----------------cce-eccccccCC
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYERGL-----------------FGL-YHDWCESFN 127 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eRGl-----------------~~~-~~d~~e~f~ 127 (221)
.....+|||+|||+|.++..|+.. +.. ..++++|.+ .+++.+.++.- +.. ..|..+...
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~ 181 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQ-GRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE 181 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTT-CEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccc
Confidence 345779999999999999999886 321 146788875 47877766421 112 234433222
Q ss_pred CCC-CccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEEcCh
Q 027609 128 TYP-RTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 128 ~yp-~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
+++ ++||+|.++. . ++..++.++.|+|||||.+++....
T Consensus 182 ~~~~~~fD~V~~~~-----~-~~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 182 DIKSLTFDAVALDM-----L-NPHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp ------EEEEEECS-----S-STTTTHHHHGGGEEEEEEEEEEESS
T ss_pred ccCCCCeeEEEECC-----C-CHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 456 7899999862 3 4556899999999999999988654
No 198
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.99 E-value=1.6e-09 Score=94.56 Aligned_cols=136 Identities=17% Similarity=0.148 Sum_probs=87.3
Q ss_pred CCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHc------Cc----cce-eccccccCCCCCCccCee
Q 027609 70 FVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYER------GL----FGL-YHDWCESFNTYPRTYDLL 136 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eR------Gl----~~~-~~d~~e~f~~yp~sFDlV 136 (221)
..++|||+|||+|+++..++++ ++. .++.+|.+ +++++++++ ++ +.+ ..|..+.+...+++||+|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~--~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~I 152 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVK--KATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI 152 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCS--EEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCc--eEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEE
Confidence 4689999999999999999987 443 46777775 588888775 22 112 223221122224899999
Q ss_pred eeccccccccc---cHHHHHHHhhhhccCCeEEEEEcCh-----hhHHHHHHHHHhcCCeEEEee----c--CCCeeEEE
Q 027609 137 HADHLFSTIKK---SLKAVVAEVDRILRPDGNLILRDDA-----ETIVEVEDLVKSLHWDVRMIY----T--NDNQGMLC 202 (221)
Q Consensus 137 h~~~v~~h~~~---d~~~vL~EmdRVLRPGG~~ii~d~~-----~~~~~i~~i~~~l~W~~~~~~----~--~~~e~~l~ 202 (221)
.++......+. ....++.++.|+|||||.+++.... +....+.+.+++.--.+.... + .+.-.+++
T Consensus 153 i~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~~~~ 232 (275)
T 1iy9_A 153 MVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWTFTI 232 (275)
T ss_dssp EESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEECCTTSGGGCEEEEE
T ss_pred EECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEecCcccCcceEEEE
Confidence 99743321110 1268999999999999999998533 234445445555533333322 1 34567889
Q ss_pred EEecc
Q 027609 203 VHKTY 207 (221)
Q Consensus 203 ~~K~~ 207 (221)
|.|++
T Consensus 233 ask~~ 237 (275)
T 1iy9_A 233 GSKKY 237 (275)
T ss_dssp EESSC
T ss_pred eeCCC
Confidence 99874
No 199
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.99 E-value=1.2e-09 Score=88.75 Aligned_cols=111 Identities=16% Similarity=0.048 Sum_probs=75.8
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCc-cce-eccccccCCCCCCccCeeeecccccccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGL-FGL-YHDWCESFNTYPRTYDLLHADHLFSTIK 146 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl-~~~-~~d~~e~f~~yp~sFDlVh~~~v~~h~~ 146 (221)
...+|||+|||+|.++..|+.++.. .++++|.+ .+++.+.++-- +.. ..|.. .+|++||+|.|+..++|+.
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~----~~~~~~D~v~~~~p~~~~~ 124 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAE--SVTAFDIDPDAIETAKRNCGGVNFMVADVS----EISGKYDTWIMNPPFGSVV 124 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBS--EEEEEESCHHHHHHHHHHCTTSEEEECCGG----GCCCCEEEEEECCCC----
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhcCCCEEEECcHH----HCCCCeeEEEECCCchhcc
Confidence 4679999999999999999988642 47888886 58998888731 222 23322 2468999999999998886
Q ss_pred c-cHHHHHHHhhhhccCCeEEEEEcChhhHHHHHHHHHhcCCeEE
Q 027609 147 K-SLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 147 ~-d~~~vL~EmdRVLRPGG~~ii~d~~~~~~~i~~i~~~l~W~~~ 190 (221)
. ....++.++.|+| |+.+++. .....+.+.+.+.... ++.
T Consensus 125 ~~~~~~~l~~~~~~~--g~~~~~~-~~~~~~~~~~~~~~~g-~~~ 165 (200)
T 1ne2_A 125 KHSDRAFIDKAFETS--MWIYSIG-NAKARDFLRREFSARG-DVF 165 (200)
T ss_dssp ---CHHHHHHHHHHE--EEEEEEE-EGGGHHHHHHHHHHHE-EEE
T ss_pred CchhHHHHHHHHHhc--CcEEEEE-cCchHHHHHHHHHHCC-CEE
Confidence 4 2357899999999 5644444 3445667777776665 543
No 200
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.98 E-value=3.7e-10 Score=105.71 Aligned_cols=98 Identities=13% Similarity=0.070 Sum_probs=68.9
Q ss_pred CCCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHH-------HHc----Cc--cc--eeccccccCC---
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPII-------YER----GL--FG--LYHDWCESFN--- 127 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a-------~eR----Gl--~~--~~~d~~e~f~--- 127 (221)
.....+|||+|||+|.++..|+.. +.. .++++|.+ .+++.| .++ |+ .. +++ +..+.
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~--~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~--gD~~~~~~ 315 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCA--LSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL--KKSFVDNN 315 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCS--EEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE--SSCSTTCH
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEE--cCcccccc
Confidence 345789999999999999999885 432 46788876 366655 443 42 12 222 11221
Q ss_pred CC---CCccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEEcC
Q 027609 128 TY---PRTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 128 ~y---p~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~ 171 (221)
+| ..+||+|.++.++ +.+ ++..+|.|+.|+|||||.+++.+.
T Consensus 316 ~~~~~~~~FDvIvvn~~l-~~~-d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 316 RVAELIPQCDVILVNNFL-FDE-DLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp HHHHHGGGCSEEEECCTT-CCH-HHHHHHHHHHTTCCTTCEEEESSC
T ss_pred ccccccCCCCEEEEeCcc-ccc-cHHHHHHHHHHhCCCCeEEEEeec
Confidence 12 3789999997555 234 788899999999999999999863
No 201
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.98 E-value=1.9e-09 Score=94.90 Aligned_cols=135 Identities=10% Similarity=0.032 Sum_probs=84.7
Q ss_pred CCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHcC------c----cce-eccccccCCCCCCccCee
Q 027609 70 FVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYERG------L----FGL-YHDWCESFNTYPRTYDLL 136 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eRG------l----~~~-~~d~~e~f~~yp~sFDlV 136 (221)
...+|||+|||+|+++..++++ +. .+++.+|.+ .+++.+.++- + +.+ ..|..+.+...+++||+|
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 167 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSV--EKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVI 167 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTC--SEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCC--CEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEE
Confidence 3589999999999999999987 43 257888876 5888887651 1 112 223222122234899999
Q ss_pred eecccccc-ccc----cHHHHHHHhhhhccCCeEEEEEcChh-----hHHHHHHHHHhcCCeEEEee------cCCCeeE
Q 027609 137 HADHLFST-IKK----SLKAVVAEVDRILRPDGNLILRDDAE-----TIVEVEDLVKSLHWDVRMIY------TNDNQGM 200 (221)
Q Consensus 137 h~~~v~~h-~~~----d~~~vL~EmdRVLRPGG~~ii~d~~~-----~~~~i~~i~~~l~W~~~~~~------~~~~e~~ 200 (221)
.++. ..+ ... ....++.++.|+|||||.+++....+ ....+.+.+++.--.+.... ..+.-.+
T Consensus 168 i~d~-~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f 246 (296)
T 1inl_A 168 IIDS-TDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFMTTYPSGMWSY 246 (296)
T ss_dssp EEEC-----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEECTTSTTSEEEE
T ss_pred EEcC-CCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeecCccCCCceEE
Confidence 9863 323 110 12689999999999999999985432 23344334444433443322 1345678
Q ss_pred EEEEecc
Q 027609 201 LCVHKTY 207 (221)
Q Consensus 201 l~~~K~~ 207 (221)
++|.|++
T Consensus 247 ~~as~~~ 253 (296)
T 1inl_A 247 TFASKGI 253 (296)
T ss_dssp EEEESSC
T ss_pred EEecCCC
Confidence 9999974
No 202
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.97 E-value=4.7e-10 Score=101.18 Aligned_cols=100 Identities=17% Similarity=0.161 Sum_probs=69.7
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc------Cc----cc-eeccccccCCCCC-CccCe
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER------GL----FG-LYHDWCESFNTYP-RTYDL 135 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR------Gl----~~-~~~d~~e~f~~yp-~sFDl 135 (221)
...++|||+|||+|.++..|+++.- ..+++.+|.+ .+++++.++ |+ +. ...|..+.+..++ ++||+
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~-~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHAS-IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 3468999999999999999998731 2257888886 588888775 22 11 2234332222345 89999
Q ss_pred eeeccccc-ccccc--HHHHHHHhhhhccCCeEEEEE
Q 027609 136 LHADHLFS-TIKKS--LKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 136 Vh~~~v~~-h~~~d--~~~vL~EmdRVLRPGG~~ii~ 169 (221)
|.++.... +...+ ...++.++.|+|||||.+++.
T Consensus 198 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 198 VIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 99964321 11111 368999999999999999997
No 203
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.96 E-value=2.4e-09 Score=93.19 Aligned_cols=125 Identities=12% Similarity=0.046 Sum_probs=80.8
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC------c----ccee-ccccccCCCCCCccCeee
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG------L----FGLY-HDWCESFNTYPRTYDLLH 137 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG------l----~~~~-~d~~e~f~~yp~sFDlVh 137 (221)
..++|||+|||+|+++..+++++ ..++.+|.+ ++++.+.++- + +.+. .|. +. |.++||+|.
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~---~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~---~~-~~~~fD~Ii 144 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD---THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLL---DL-DIKKYDLIF 144 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS---CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGG---GS-CCCCEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechH---HH-HHhhCCEEE
Confidence 46899999999999999998884 367788875 4777776541 1 1112 231 11 238899999
Q ss_pred eccccccccccHHHHHHHhhhhccCCeEEEEEcChh-----hHHHHHHHHHhcCCeEEEeec----CCCeeEEEEEecc
Q 027609 138 ADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDAE-----TIVEVEDLVKSLHWDVRMIYT----NDNQGMLCVHKTY 207 (221)
Q Consensus 138 ~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~-----~~~~i~~i~~~l~W~~~~~~~----~~~e~~l~~~K~~ 207 (221)
++ .. +|..++.++.|+|||||.+++....+ ....+.+.+++.--.+..... .+.-.+++|.|.+
T Consensus 145 ~d-----~~-dp~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~~~~vP~~g~~~~~~as~~~ 217 (262)
T 2cmg_A 145 CL-----QE-PDIHRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAMPFVAPLRILSNKGYIYASFKT 217 (262)
T ss_dssp ES-----SC-CCHHHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCSEEEEECCTTCTTCCEEEEEEESSC
T ss_pred EC-----CC-ChHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCCceEEEEEccCCCcccEEEEeeCCC
Confidence 87 23 56679999999999999999974332 233333334443222222221 2345678898874
No 204
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.96 E-value=7.8e-10 Score=98.19 Aligned_cols=136 Identities=15% Similarity=0.096 Sum_probs=86.7
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC-------c----cce-eccccccCCCCCCccCee
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG-------L----FGL-YHDWCESFNTYPRTYDLL 136 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG-------l----~~~-~~d~~e~f~~yp~sFDlV 136 (221)
..++|||+|||+|+++..|+++.- ..+++.+|.+ .+++.+.++- + +.+ ..|..+.+...+++||+|
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPT-VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 468999999999999999998731 2257888876 5888887651 1 111 223221111125899999
Q ss_pred eeccccccc---c--c--cHHHHHHHhhhhccCCeEEEEEcCh------hhHHHHHHHHHhcCCeEEEee----c-CCCe
Q 027609 137 HADHLFSTI---K--K--SLKAVVAEVDRILRPDGNLILRDDA------ETIVEVEDLVKSLHWDVRMIY----T-NDNQ 198 (221)
Q Consensus 137 h~~~v~~h~---~--~--d~~~vL~EmdRVLRPGG~~ii~d~~------~~~~~i~~i~~~l~W~~~~~~----~-~~~e 198 (221)
.++... |. . . ....++.++.|+|||||.+++.... +....+.+.+++.--.+.... + .+.-
T Consensus 156 i~d~~~-~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~~~g~~ 234 (314)
T 1uir_A 156 IIDLTD-PVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVRSYKNHIPGFFLNF 234 (314)
T ss_dssp EEECCC-CBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEEEEEEEEGGGTEEE
T ss_pred EECCCC-cccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceEEEEEecCCCCCeE
Confidence 998544 33 1 0 1368999999999999999987322 234555555555533333221 1 2345
Q ss_pred eEEEEEecc
Q 027609 199 GMLCVHKTY 207 (221)
Q Consensus 199 ~~l~~~K~~ 207 (221)
.+++|.|.+
T Consensus 235 ~~~~as~~~ 243 (314)
T 1uir_A 235 GFLLASDAF 243 (314)
T ss_dssp EEEEEESSS
T ss_pred EEEEEECCC
Confidence 688999873
No 205
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.96 E-value=2.3e-10 Score=94.54 Aligned_cols=94 Identities=16% Similarity=0.122 Sum_probs=66.3
Q ss_pred CCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHc----Cc-------cc-eeccccccCCCCC-Ccc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYER----GL-------FG-LYHDWCESFNTYP-RTY 133 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eR----Gl-------~~-~~~d~~e~f~~yp-~sF 133 (221)
....+|||+|||+|.++..|++. +.. .+++++|.+ .+++.+.++ |+ +. ...|..+ . +.+ ++|
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~-~~~~~~f 152 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCT-GKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM-G-YAEEAPY 152 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTT-CEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG-C-CGGGCCE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCC-cEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCccc-C-cccCCCc
Confidence 34679999999999999999875 211 156888876 477777654 11 11 2234322 1 223 789
Q ss_pred CeeeeccccccccccHHHHHHHhhhhccCCeEEEEEcCh
Q 027609 134 DLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 134 DlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
|+|++...+.++. .++.|+|||||.+++....
T Consensus 153 D~i~~~~~~~~~~-------~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 153 DAIHVGAAAPVVP-------QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEEEECSBBSSCC-------HHHHHTEEEEEEEEEEESC
T ss_pred CEEEECCchHHHH-------HHHHHhcCCCcEEEEEEec
Confidence 9999998887654 4788999999999998654
No 206
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.94 E-value=1.4e-09 Score=96.40 Aligned_cols=136 Identities=20% Similarity=0.227 Sum_probs=83.7
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc------Cc----ccee-ccccccCCCCCCccCee
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER------GL----FGLY-HDWCESFNTYPRTYDLL 136 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR------Gl----~~~~-~d~~e~f~~yp~sFDlV 136 (221)
...++|||+|||+|.++..|++++- ..+++.+|.+ .+++++.++ |+ +.++ .|..+.+...+++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPS-VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence 3468999999999999999998741 2257888876 588888765 22 1122 23211112224899999
Q ss_pred eeccccccccc----cHHHHHHHhhhhccCCeEEEEEcCh-----hhHHHHHHHHHhcCCeEEEee------cCCCeeEE
Q 027609 137 HADHLFSTIKK----SLKAVVAEVDRILRPDGNLILRDDA-----ETIVEVEDLVKSLHWDVRMIY------TNDNQGML 201 (221)
Q Consensus 137 h~~~v~~h~~~----d~~~vL~EmdRVLRPGG~~ii~d~~-----~~~~~i~~i~~~l~W~~~~~~------~~~~e~~l 201 (221)
.++... ++.. ....++.++.|+|||||.+++.... +....+.+.++++-=.+.... ..+.-.++
T Consensus 173 i~d~~~-~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~~g~~g~~ 251 (304)
T 2o07_A 173 ITDSSD-PMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQIGFM 251 (304)
T ss_dssp EEECC------------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEE
T ss_pred EECCCC-CCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCCCceeEEEEeccccCcceEEE
Confidence 997433 2221 1257899999999999999997522 234455444554433332221 12345788
Q ss_pred EEEec
Q 027609 202 CVHKT 206 (221)
Q Consensus 202 ~~~K~ 206 (221)
+|.|.
T Consensus 252 ~as~~ 256 (304)
T 2o07_A 252 LCSKN 256 (304)
T ss_dssp EEESS
T ss_pred EEeCC
Confidence 89886
No 207
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.93 E-value=1.9e-09 Score=96.18 Aligned_cols=135 Identities=13% Similarity=0.054 Sum_probs=86.8
Q ss_pred CCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc--ccee-ccccccCCCCCCccCeeee
Q 027609 67 NWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL--FGLY-HDWCESFNTYPRTYDLLHA 138 (221)
Q Consensus 67 ~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl--~~~~-~d~~e~f~~yp~sFDlVh~ 138 (221)
.+....+|||+|||+|+++..++........++++|.+ ++++.|.++ |+ +... .|. ..+++...+||+|.|
T Consensus 200 ~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~-~~~~~~~~~~D~Ii~ 278 (354)
T 3tma_A 200 DARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADA-RHLPRFFPEVDRILA 278 (354)
T ss_dssp TCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCG-GGGGGTCCCCSEEEE
T ss_pred CCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCCh-hhCccccCCCCEEEE
Confidence 44557899999999999999887753000146788886 588777665 43 2222 343 224322377999999
Q ss_pred cccccc-------ccccHHHHHHHhhhhccCCeEEEEEcChhhHHHHHHHHHhcCCeEEEe---ecCC-CeeEEEEEe
Q 027609 139 DHLFST-------IKKSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVRMI---YTND-NQGMLCVHK 205 (221)
Q Consensus 139 ~~v~~h-------~~~d~~~vL~EmdRVLRPGG~~ii~d~~~~~~~i~~i~~~l~W~~~~~---~~~~-~e~~l~~~K 205 (221)
+--+.. +......++.++.|+|||||.+++...++. -++.+.+ ..|+.... .+.. .-.+++++|
T Consensus 279 npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~--~~~~~~~-~g~~~~~~~~l~~g~l~~~i~vl~r 353 (354)
T 3tma_A 279 NPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPA--LLKRALP-PGFALRHARVVEQGGVYPRVFVLEK 353 (354)
T ss_dssp CCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHH--HHHHHCC-TTEEEEEEEECCBTTBCCEEEEEEE
T ss_pred CCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHH--HHHHHhh-cCcEEEEEEEEEeCCEEEEEEEEEc
Confidence 754431 111347899999999999999999988753 2455555 77776422 1222 345666665
No 208
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.92 E-value=5.1e-10 Score=95.84 Aligned_cols=96 Identities=9% Similarity=0.055 Sum_probs=67.7
Q ss_pred CCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHc----Cccc---ee-ccccccCCCC------CCcc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYER----GLFG---LY-HDWCESFNTY------PRTY 133 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eR----Gl~~---~~-~d~~e~f~~y------p~sF 133 (221)
..++|||+|||+|.++..|++. +- ...++.+|.+ ++++.+.++ |+.. ++ .|..+.++.+ +++|
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~-~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPE-DGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCT-TCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 4679999999999999998875 10 1257888885 477777654 4422 22 3332222223 4899
Q ss_pred CeeeeccccccccccHHHHHHHhhhhccCCeEEEEEc
Q 027609 134 DLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 134 DlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
|+|.+.... .+...++.++.|+|||||++++.+
T Consensus 158 D~V~~d~~~----~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 158 DFIFVDADK----DNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp SEEEECSCS----TTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEcCch----HHHHHHHHHHHHhCCCCeEEEEec
Confidence 999987442 256789999999999999999975
No 209
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.91 E-value=4.1e-09 Score=95.09 Aligned_cols=134 Identities=12% Similarity=0.028 Sum_probs=85.3
Q ss_pred CeEEeecCcchHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcC-cc-----ce-eccccccCCCCC-CccCeeeeccc
Q 027609 72 RNVMDMRAVYGGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERG-LF-----GL-YHDWCESFNTYP-RTYDLLHADHL 141 (221)
Q Consensus 72 r~VLD~GcG~G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRG-l~-----~~-~~d~~e~f~~yp-~sFDlVh~~~v 141 (221)
.+|||+|||.|+++..|++ .+-. .++.+|.+ .++++++++- +. .+ ..|..+-+..++ ++||+|.+..
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~--~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~- 167 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQS--RNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDV- 167 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTC--EEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECC-
T ss_pred CEEEEEECCcCHHHHHHHHHCCCc--EEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECC-
Confidence 4999999999999999998 4322 46777775 5899888762 11 12 234222122355 8999999873
Q ss_pred ccccc-c---cHHHHHHHhhhhccCCeEEEEEcCh----hhHHHHHHHHHhcCCeEEEee-------cCCCeeEEEEEec
Q 027609 142 FSTIK-K---SLKAVVAEVDRILRPDGNLILRDDA----ETIVEVEDLVKSLHWDVRMIY-------TNDNQGMLCVHKT 206 (221)
Q Consensus 142 ~~h~~-~---d~~~vL~EmdRVLRPGG~~ii~d~~----~~~~~i~~i~~~l~W~~~~~~-------~~~~e~~l~~~K~ 206 (221)
+.+.. . .-..++.++.|+|||||.+++.... .....+.+.+++.--.+.... ......|++|.|.
T Consensus 168 ~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~~v~~~~~~~~~~g~~~gN~Vl~As~~ 247 (317)
T 3gjy_A 168 FAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFEHVAVIADPPMLKGRRYGNIILMGSDT 247 (317)
T ss_dssp STTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCSEEEEEECHHHHTTSSCEEEEEEEESS
T ss_pred CCccccchhhhHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCCceEEEEecCCCCCCcCceEEEEEECC
Confidence 33321 0 1268999999999999999987432 223333333343333343332 1345788999987
Q ss_pred cc
Q 027609 207 YW 208 (221)
Q Consensus 207 ~w 208 (221)
-.
T Consensus 248 pl 249 (317)
T 3gjy_A 248 EF 249 (317)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 210
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.91 E-value=7.3e-09 Score=84.21 Aligned_cols=116 Identities=15% Similarity=0.113 Sum_probs=82.8
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC----c-cceeccccccCCCCCCccCeeeecccc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG----L-FGLYHDWCESFNTYPRTYDLLHADHLF 142 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG----l-~~~~~d~~e~f~~yp~sFDlVh~~~v~ 142 (221)
....+|||+|||+|.++..|++++.. +++++|.+ .+++.+.++- + +..++. .+..+|.+||+|.|+-.+
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~---d~~~~~~~~D~v~~~~p~ 122 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGAK--EVICVEVDKEAVDVLIENLGEFKGKFKVFIG---DVSEFNSRVDIVIMNPPF 122 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHTGGGTTSEEEEES---CGGGCCCCCSEEEECCCC
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHcCCCEEEEEC---chHHcCCCCCEEEEcCCC
Confidence 34679999999999999999988643 57888886 5888887762 2 122221 122356799999999887
Q ss_pred ccccc-cHHHHHHHhhhhccCCeEEEEEc-ChhhHHHHHHHHHhcCCeEEE
Q 027609 143 STIKK-SLKAVVAEVDRILRPDGNLILRD-DAETIVEVEDLVKSLHWDVRM 191 (221)
Q Consensus 143 ~h~~~-d~~~vL~EmdRVLRPGG~~ii~d-~~~~~~~i~~i~~~l~W~~~~ 191 (221)
++... ....++.++.|+| ||.+++.- .....+.+.+.+....|++..
T Consensus 123 ~~~~~~~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 123 GSQRKHADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGFVVTH 171 (207)
T ss_dssp SSSSTTTTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTEEEEE
T ss_pred ccccCCchHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCCeEEE
Confidence 76543 4467899999999 66555542 555677788888888887653
No 211
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.91 E-value=3.8e-09 Score=92.36 Aligned_cols=136 Identities=21% Similarity=0.231 Sum_probs=84.1
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCcc-----------ce-eccccccCCCCCCccCe
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLF-----------GL-YHDWCESFNTYPRTYDL 135 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~-----------~~-~~d~~e~f~~yp~sFDl 135 (221)
...++|||+|||.|+++..++++.- +.+++.+|.+ .+++.+.++ +. .+ ..|..+.+...+++||+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~-~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIY-FKNISCGYEDKRVNVFIEDASKFLENVTNTYDV 154 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHH-CTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHH-hHHhccccCCCcEEEEECChHHHHHhCCCCceE
Confidence 3468999999999999999988741 2357888876 588888876 21 11 22321111112589999
Q ss_pred eeeccccccccc-cH--HHHHHHhhhhccCCeEEEEEcCh-----hhHHHHHHHHHhcCCeEEEee------cCCCeeEE
Q 027609 136 LHADHLFSTIKK-SL--KAVVAEVDRILRPDGNLILRDDA-----ETIVEVEDLVKSLHWDVRMIY------TNDNQGML 201 (221)
Q Consensus 136 Vh~~~v~~h~~~-d~--~~vL~EmdRVLRPGG~~ii~d~~-----~~~~~i~~i~~~l~W~~~~~~------~~~~e~~l 201 (221)
|.++.....-+. .. ..++.++.|+|||||.+++.... +....+.+.+++.--.+.... ..+.-.++
T Consensus 155 Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~y~~g~~g~~ 234 (283)
T 2i7c_A 155 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGIL 234 (283)
T ss_dssp EEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEE
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCCceEEEEEEcCCcCCCcEEEE
Confidence 999643322111 22 68999999999999999998543 223334444444423333221 11223688
Q ss_pred EEEec
Q 027609 202 CVHKT 206 (221)
Q Consensus 202 ~~~K~ 206 (221)
+|.|.
T Consensus 235 ~~s~~ 239 (283)
T 2i7c_A 235 CCSKT 239 (283)
T ss_dssp EEESS
T ss_pred EEeCC
Confidence 88876
No 212
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.91 E-value=1.3e-09 Score=92.23 Aligned_cols=96 Identities=10% Similarity=0.060 Sum_probs=67.3
Q ss_pred CCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHc----Cccc---e-eccccccCCCC------CCcc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYER----GLFG---L-YHDWCESFNTY------PRTY 133 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eR----Gl~~---~-~~d~~e~f~~y------p~sF 133 (221)
..++|||+|||+|..+..|++. +- ...++.+|.+ ++++.+.++ |+.. + ..|..+.++.+ +++|
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPD-DGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCT-TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 4679999999999999998875 20 1256788875 477776553 5532 2 23433322223 4799
Q ss_pred CeeeeccccccccccHHHHHHHhhhhccCCeEEEEEc
Q 027609 134 DLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 134 DlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
|+|.+... ..+...++.++.|+|||||++++.+
T Consensus 149 D~I~~d~~----~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 149 DFGFVDAD----KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CEEEECCc----hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 99998743 2256789999999999999999975
No 213
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.91 E-value=2e-09 Score=96.19 Aligned_cols=135 Identities=17% Similarity=0.195 Sum_probs=82.2
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc------Cc----cce-eccccccCCCCCCccCeee
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER------GL----FGL-YHDWCESFNTYPRTYDLLH 137 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR------Gl----~~~-~~d~~e~f~~yp~sFDlVh 137 (221)
..++|||+|||+|+++..|+++.- ..+++.+|.+ .++++|.++ |+ +.+ ..|..+.+..-+++||+|.
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHES-VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTT-CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 458999999999999999988731 2367888886 588888876 22 111 1232221111248999999
Q ss_pred ecccccccccc--H--HHHHHHhhhhccCCeEEEEEcCh-----hhHHHHHHHHHhcCCeEEEee----c-CCCe-eEEE
Q 027609 138 ADHLFSTIKKS--L--KAVVAEVDRILRPDGNLILRDDA-----ETIVEVEDLVKSLHWDVRMIY----T-NDNQ-GMLC 202 (221)
Q Consensus 138 ~~~v~~h~~~d--~--~~vL~EmdRVLRPGG~~ii~d~~-----~~~~~i~~i~~~l~W~~~~~~----~-~~~e-~~l~ 202 (221)
++. +.++... . ..++.++.|+|||||.+++.... +....+.+.++.+-=.+.... + .+.. .+++
T Consensus 187 ~d~-~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v~~~~~~iP~~~~g~~g~~~ 265 (314)
T 2b2c_A 187 TDS-SDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIFPAVTYAQSIVSTYPSGSMGYLI 265 (314)
T ss_dssp ECC-C-------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEE
T ss_pred EcC-CCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHCCcceEEEEEecCcCCCceEEEE
Confidence 864 3333211 1 68899999999999999997532 234444444555433333221 1 1233 6888
Q ss_pred EEec
Q 027609 203 VHKT 206 (221)
Q Consensus 203 ~~K~ 206 (221)
|.|.
T Consensus 266 ask~ 269 (314)
T 2b2c_A 266 CAKN 269 (314)
T ss_dssp EESS
T ss_pred EeCC
Confidence 8886
No 214
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.90 E-value=2.6e-10 Score=96.27 Aligned_cols=100 Identities=11% Similarity=0.041 Sum_probs=60.4
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Ccc---ceec-ccccc-CCCCC----CccCe
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLF---GLYH-DWCES-FNTYP----RTYDL 135 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~---~~~~-d~~e~-f~~yp----~sFDl 135 (221)
...+|||+|||+|.++..|+.+. ...+++++|.+ .+++.|.++ |+. ..++ |..+. +.+++ ++||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 46789999999999999888751 01257888886 588877665 442 2222 32111 22344 58999
Q ss_pred eeeccccccccc--------------cHHHHHHHhhhhccCCeEEEEEc
Q 027609 136 LHADHLFSTIKK--------------SLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 136 Vh~~~v~~h~~~--------------d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
|.|+--+.+... ....++.++.|+|||||.+.+.+
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~ 192 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVK 192 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHHHH
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEH
Confidence 999855543220 12345678999999988776543
No 215
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.89 E-value=8.8e-10 Score=91.12 Aligned_cols=95 Identities=16% Similarity=0.154 Sum_probs=66.2
Q ss_pred CCCeEEeecCcchHHHHHHhhCCC----eEEEeccCCCC-CCHHHHHHc----Cc-------cce-eccccccCCC---C
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKV----WVMNVVPIESP-DTLPIIYER----GL-------FGL-YHDWCESFNT---Y 129 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v----~vmnv~~~d~~-~~l~~a~eR----Gl-------~~~-~~d~~e~f~~---y 129 (221)
...+|||+|||+|.++..|++... ...+++++|.+ .+++.+.++ |+ +.. ..|..+ ..+ +
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~ 158 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQ-VNEEEKK 158 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGG-CCHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHh-cccccCc
Confidence 367999999999999999987532 11256888876 477777665 31 112 234322 110 2
Q ss_pred C-CccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEEcCh
Q 027609 130 P-RTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 130 p-~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
+ .+||+|++...++++ +.++.|+|||||.+++.-..
T Consensus 159 ~~~~fD~I~~~~~~~~~-------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 159 ELGLFDAIHVGASASEL-------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHCCEEEEEECSBBSSC-------CHHHHHHEEEEEEEEEEEEE
T ss_pred cCCCcCEEEECCchHHH-------HHHHHHhcCCCcEEEEEEcc
Confidence 3 889999999888765 36788999999999998643
No 216
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.89 E-value=4.1e-09 Score=94.13 Aligned_cols=135 Identities=20% Similarity=0.225 Sum_probs=86.0
Q ss_pred CCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHcC------c----cc-eeccccccCCCCCCccCee
Q 027609 70 FVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYERG------L----FG-LYHDWCESFNTYPRTYDLL 136 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eRG------l----~~-~~~d~~e~f~~yp~sFDlV 136 (221)
..++|||+|||+|+++..++++ +. .+++.+|.+ .+++.+.++- + +. ...|..+.+...+++||+|
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvI 193 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSV--ENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 193 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEE
Confidence 4589999999999999999987 33 257888886 5888888762 1 11 1223222111125899999
Q ss_pred eeccccccccc--c--HHHHHHHhhhhccCCeEEEEEcCh-----hhHHHHHHHHHhcCCeEEEee------cCCCeeEE
Q 027609 137 HADHLFSTIKK--S--LKAVVAEVDRILRPDGNLILRDDA-----ETIVEVEDLVKSLHWDVRMIY------TNDNQGML 201 (221)
Q Consensus 137 h~~~v~~h~~~--d--~~~vL~EmdRVLRPGG~~ii~d~~-----~~~~~i~~i~~~l~W~~~~~~------~~~~e~~l 201 (221)
.++. +.++.. . ...++.++.|+|||||.+++.... +....+.+.+++.--.+.... ..+.-.++
T Consensus 194 i~d~-~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~f~ 272 (321)
T 2pt6_A 194 IVDS-SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGIL 272 (321)
T ss_dssp EEEC-CCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEE
T ss_pred EECC-cCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEEEEEEeccccCceEEEE
Confidence 9874 222211 1 168999999999999999996432 234444444555444443332 12234588
Q ss_pred EEEecc
Q 027609 202 CVHKTY 207 (221)
Q Consensus 202 ~~~K~~ 207 (221)
+|.|.+
T Consensus 273 ~as~~~ 278 (321)
T 2pt6_A 273 CCSKTD 278 (321)
T ss_dssp EEESST
T ss_pred EeeCCC
Confidence 899875
No 217
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.88 E-value=4.7e-10 Score=93.33 Aligned_cols=93 Identities=18% Similarity=0.164 Sum_probs=65.9
Q ss_pred CCCeEEeecCcchHHHHHHhhC-CC----eEEEeccCCCC-CCHHHHHHcC---------c--cc-eeccccccCCCCC-
Q 027609 70 FVRNVMDMRAVYGGFAAALKDL-KV----WVMNVVPIESP-DTLPIIYERG---------L--FG-LYHDWCESFNTYP- 130 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~-~v----~vmnv~~~d~~-~~l~~a~eRG---------l--~~-~~~d~~e~f~~yp- 130 (221)
...+|||+|||+|.+++.|++. +. ...+++.+|.+ ++++.+.++. . +. ...|..+ .++
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~---~~~~ 160 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK---GYPP 160 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG---CCGG
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc---CCCc
Confidence 4679999999999999998874 21 00146788875 4777776652 1 11 2234332 343
Q ss_pred -CccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEEcCh
Q 027609 131 -RTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 131 -~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
++||+|++...++|+. .++.|+|||||.+++.-..
T Consensus 161 ~~~fD~I~~~~~~~~~~-------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 161 NAPYNAIHVGAAAPDTP-------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp GCSEEEEEECSCBSSCC-------HHHHHTEEEEEEEEEEESC
T ss_pred CCCccEEEECCchHHHH-------HHHHHHhcCCCEEEEEEec
Confidence 7999999998887765 5788999999999998643
No 218
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.88 E-value=4.9e-10 Score=99.64 Aligned_cols=98 Identities=13% Similarity=0.097 Sum_probs=66.9
Q ss_pred CCCCeEEeecCcc--hHHHHHHhhC---CCeEEEeccCCCC-CCHHHHHHcCccc-------e-ecccccc---CC-CC-
Q 027609 69 SFVRNVMDMRAVY--GGFAAALKDL---KVWVMNVVPIESP-DTLPIIYERGLFG-------L-YHDWCES---FN-TY- 129 (221)
Q Consensus 69 ~~~r~VLD~GcG~--G~faa~L~~~---~v~vmnv~~~d~~-~~l~~a~eRGl~~-------~-~~d~~e~---f~-~y- 129 (221)
..++.|||+|||+ ++....++.+ +. .|+.+|.+ .||+.++++ +.+ . ..|..+. +. +.
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~~P~a---rVv~VD~sp~mLa~Ar~~-l~~~~~~~~~~v~aD~~~~~~~l~~~~~ 152 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSVAPES---RVVYVDNDPIVLTLSQGL-LASTPEGRTAYVEADMLDPASILDAPEL 152 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHHCTTC---EEEEEECCHHHHHTTHHH-HCCCSSSEEEEEECCTTCHHHHHTCHHH
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHHCCCC---EEEEEeCChHHHHHHHHH-hccCCCCcEEEEEecccChhhhhccccc
Confidence 4589999999997 3333443332 23 57899986 599988776 321 1 2233221 00 00
Q ss_pred CCccC-----eeeeccccccccc--cHHHHHHHhhhhccCCeEEEEEc
Q 027609 130 PRTYD-----LLHADHLFSTIKK--SLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 130 p~sFD-----lVh~~~v~~h~~~--d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
.++|| .|.++.+|||+++ ++..+|.++.|.|+|||+|++++
T Consensus 153 ~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 153 RDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp HTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred ccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 14566 4788999999985 27899999999999999999994
No 219
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.88 E-value=5e-09 Score=93.20 Aligned_cols=126 Identities=12% Similarity=0.114 Sum_probs=77.7
Q ss_pred CCCeEEeecC------cchH-HHHHHhhCCCeEEEeccCCCCCCHHHHHHcCccc-eeccccccCCCCCCccCeeeeccc
Q 027609 70 FVRNVMDMRA------VYGG-FAAALKDLKVWVMNVVPIESPDTLPIIYERGLFG-LYHDWCESFNTYPRTYDLLHADHL 141 (221)
Q Consensus 70 ~~r~VLD~Gc------G~G~-faa~L~~~~v~vmnv~~~d~~~~l~~a~eRGl~~-~~~d~~e~f~~yp~sFDlVh~~~v 141 (221)
...+|||+|| |+|+ +++.+...+. .|+++|.+..+ + ++.= ...|+.+ + +++++||+|.|+..
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs~~~a~~~~~~~---~V~gvDis~~v----~-~v~~~i~gD~~~-~-~~~~~fD~Vvsn~~ 132 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGTAVLRQWLPTGT---LLVDSDLNDFV----S-DADSTLIGDCAT-V-HTANKWDLIISDMY 132 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHHHHHHHHSCTTC---EEEEEESSCCB----C-SSSEEEESCGGG-C-CCSSCEEEEEECCC
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHcCCCC---EEEEEECCCCC----C-CCEEEEECcccc-C-CccCcccEEEEcCC
Confidence 4678999999 6687 2222222222 46777776442 1 2322 3456433 2 34589999999743
Q ss_pred cc--------ccc--ccHHHHHHHhhhhccCCeEEEEEcCh-hhHHHHHHHHHhcCCe-EEEe--ecCCCeeEEEEEe
Q 027609 142 FS--------TIK--KSLKAVVAEVDRILRPDGNLILRDDA-ETIVEVEDLVKSLHWD-VRMI--YTNDNQGMLCVHK 205 (221)
Q Consensus 142 ~~--------h~~--~d~~~vL~EmdRVLRPGG~~ii~d~~-~~~~~i~~i~~~l~W~-~~~~--~~~~~e~~l~~~K 205 (221)
.+ +.. .....+|.|+.|+|||||.|++.... ....++.++++...+. +... ..++.|.+|+|+.
T Consensus 133 ~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~~asr~~s~e~~lv~~~ 210 (290)
T 2xyq_A 133 DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFVTNVNASSSEAFLIGAN 210 (290)
T ss_dssp CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEEEGGGTTSSCEEEEEEE
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEEEEcCCCchheEEecCC
Confidence 22 110 03458999999999999999996532 2235677777777554 3333 1334788998886
No 220
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.87 E-value=4.1e-09 Score=96.93 Aligned_cols=107 Identities=17% Similarity=0.122 Sum_probs=72.0
Q ss_pred hhhhccc--CCCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHH----HHcCccc---eeccccccCCCC
Q 027609 59 SYLNGMG--INWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPII----YERGLFG---LYHDWCESFNTY 129 (221)
Q Consensus 59 ~Y~~~L~--i~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a----~eRGl~~---~~~d~~e~f~~y 129 (221)
.|...|. ....+...|||+|||+|-++...++.|+. .|+++|.+++++.| ...|+.. +++.-.+.+ ..
T Consensus 70 aY~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~--~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~-~l 146 (376)
T 4hc4_A 70 AYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGAR--RVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETV-EL 146 (376)
T ss_dssp HHHHHHHTTHHHHTTCEEEEETCTTSHHHHHHHHTTCS--EEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTC-CC
T ss_pred HHHHHHHhCHHhcCCCEEEEeCCCccHHHHHHHHhCCC--EEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeee-cC
Confidence 4665442 22234678999999999998877777764 35677776666544 4456633 344323333 35
Q ss_pred CCccCeeeec---cccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 130 PRTYDLLHAD---HLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 130 p~sFDlVh~~---~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
|..||+|.|. .++.+-. ....++...+|.|||||.++-+
T Consensus 147 pe~~DvivsE~~~~~l~~e~-~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 147 PEQVDAIVSEWMGYGLLHES-MLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp SSCEEEEECCCCBTTBTTTC-SHHHHHHHHHHHEEEEEEEESC
T ss_pred CccccEEEeecccccccccc-hhhhHHHHHHhhCCCCceECCc
Confidence 7899999984 2333222 6788999999999999998865
No 221
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.87 E-value=6.8e-09 Score=93.79 Aligned_cols=116 Identities=10% Similarity=0.043 Sum_probs=81.8
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc--cce-eccccccCCC-CCCccCeeeecc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL--FGL-YHDWCESFNT-YPRTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl--~~~-~~d~~e~f~~-yp~sFDlVh~~~ 140 (221)
...+|||+| |+|.++..|+..+.. ..++++|.+ ++++.+.++ |+ +.. ..|..+.++. ++++||+|.++.
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~-~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLP-KRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCC-SEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 468999999 999999999877531 157899986 688888776 54 222 3454332432 246999999998
Q ss_pred ccccccccHHHHHHHhhhhccCCe-EEEEEcCh--hhH---HHHHHHHH-hcCCeE
Q 027609 141 LFSTIKKSLKAVVAEVDRILRPDG-NLILRDDA--ETI---VEVEDLVK-SLHWDV 189 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdRVLRPGG-~~ii~d~~--~~~---~~i~~i~~-~l~W~~ 189 (221)
.+++.. ...++.++.|+||||| .++++-.. ... ..+++.+. ......
T Consensus 250 p~~~~~--~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 303 (373)
T 2qm3_A 250 PETLEA--IRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVI 303 (373)
T ss_dssp CSSHHH--HHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEE
T ss_pred CCchHH--HHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcch
Confidence 776443 5899999999999999 44665443 223 66777776 666655
No 222
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.86 E-value=3.4e-09 Score=97.61 Aligned_cols=118 Identities=18% Similarity=0.253 Sum_probs=79.1
Q ss_pred CCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc-e-eccccccCCCCCCccCeeeeccc-c
Q 027609 71 VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG-L-YHDWCESFNTYPRTYDLLHADHL-F 142 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~-~-~~d~~e~f~~yp~sFDlVh~~~v-~ 142 (221)
..+|||+|||+|+|+..++..+.. |+++|.+ .+++.+.++ |+.. + ..|..+.+..+++.||+|.++-- |
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga~---V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGAY---ALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTCE---EEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred CCeEEEcccchhHHHHHHHHcCCe---EEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 679999999999999999998754 6888987 488877665 4432 1 23322212223545999998632 2
Q ss_pred cc-------ccccHHHHHHHhhhhccCCeEEEEEcChh------hHHHHHHHHHhcCCeEEE
Q 027609 143 ST-------IKKSLKAVVAEVDRILRPDGNLILRDDAE------TIVEVEDLVKSLHWDVRM 191 (221)
Q Consensus 143 ~h-------~~~d~~~vL~EmdRVLRPGG~~ii~d~~~------~~~~i~~i~~~l~W~~~~ 191 (221)
.. ...+...++.++.|+|||||++++.++.. +.+.++..+....-+..+
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~i 353 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRLRV 353 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeEEE
Confidence 21 11156789999999999999999776532 345555555555555443
No 223
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.86 E-value=5.7e-10 Score=96.62 Aligned_cols=114 Identities=18% Similarity=0.236 Sum_probs=74.9
Q ss_pred CCCCCeEEeecCcchHHHHHHhhC--CCeEEEeccCCCC-CCHHHHHHc----Cccc--ee-ccccccCCCC----CCcc
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDL--KVWVMNVVPIESP-DTLPIIYER----GLFG--LY-HDWCESFNTY----PRTY 133 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~--~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~~-~d~~e~f~~y----p~sF 133 (221)
.....+|||+|||+|+++..|++. +. ..|+++|.+ .+++.+.++ |+.. ++ .|. ..++.. +++|
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~--~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~-~~~~~~~~~~~~~f 157 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNK--GTIVAVEISKTRTKALKSNINRMGVLNTIIINADM-RKYKDYLLKNEIFF 157 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCH-HHHHHHHHHTTCCE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCC--CEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCCh-HhcchhhhhccccC
Confidence 345679999999999999999873 31 146888876 477766655 5432 22 232 222221 4789
Q ss_pred Ceeeecccccc-----------------ccccHHHHHHHhhhhccCCeEEEEEcCh----hhHHHHHHHHHh
Q 027609 134 DLLHADHLFST-----------------IKKSLKAVVAEVDRILRPDGNLILRDDA----ETIVEVEDLVKS 184 (221)
Q Consensus 134 DlVh~~~v~~h-----------------~~~d~~~vL~EmdRVLRPGG~~ii~d~~----~~~~~i~~i~~~ 184 (221)
|+|.|+--++. +......+|.++.|+|||||.++++++. +..+.++.+++.
T Consensus 158 D~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~ 229 (274)
T 3ajd_A 158 DKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQK 229 (274)
T ss_dssp EEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHH
T ss_pred CEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHh
Confidence 99998732221 1125578999999999999999998653 224455665543
No 224
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.86 E-value=5.3e-10 Score=106.69 Aligned_cols=96 Identities=18% Similarity=0.165 Sum_probs=69.2
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHH----cCccc--eeccccccCC-CCC-CccCeeeecc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYE----RGLFG--LYHDWCESFN-TYP-RTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~e----RGl~~--~~~d~~e~f~-~yp-~sFDlVh~~~ 140 (221)
+..+|||+|||.|-++..|+.+|+. |+++|.+ .++++|.. +|... ..+.-+|.+. .++ ++||+|.|..
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~---V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e 142 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGAT---IVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLS 142 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCE---EEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEES
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCE---EEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECc
Confidence 3568999999999999999999974 6999987 48887664 45322 1221123221 244 8999999999
Q ss_pred ccccccccHH--HHHHHhhhhccCCeEEEEE
Q 027609 141 LFSTIKKSLK--AVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 141 v~~h~~~d~~--~vL~EmdRVLRPGG~~ii~ 169 (221)
+|+|+. |+. ..+..+.+.|+++|..++-
T Consensus 143 ~~ehv~-~~~~~~~~~~~~~tl~~~~~~~~~ 172 (569)
T 4azs_A 143 VFHHIV-HLHGIDEVKRLLSRLADVTQAVIL 172 (569)
T ss_dssp CHHHHH-HHHCHHHHHHHHHHHHHHSSEEEE
T ss_pred chhcCC-CHHHHHHHHHHHHHhccccceeeE
Confidence 999999 664 3355666778888876665
No 225
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.84 E-value=3.9e-09 Score=91.52 Aligned_cols=113 Identities=14% Similarity=0.081 Sum_probs=76.6
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc--e-eccccccCCCCCCccCeeeeccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG--L-YHDWCESFNTYPRTYDLLHADHL 141 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~-~~d~~e~f~~yp~sFDlVh~~~v 141 (221)
...+|||+|||+|+|+..|+++.- ...|+++|.+ .+++.+.++ |+.+ . ..|. +.+ +.+++||+|.++..
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~-~~~-~~~~~~D~Vi~d~p 195 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADN-RDV-ELKDVADRVIMGYV 195 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCG-GGC-CCTTCEEEEEECCC
T ss_pred CCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECCh-HHc-CccCCceEEEECCc
Confidence 467999999999999999988731 1246888875 577766553 4432 2 2343 223 33579999998754
Q ss_pred cccccccHHHHHHHhhhhccCCeEEEEEcChh------hH-HHHHHHHHhcCCeEE
Q 027609 142 FSTIKKSLKAVVAEVDRILRPDGNLILRDDAE------TI-VEVEDLVKSLHWDVR 190 (221)
Q Consensus 142 ~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~------~~-~~i~~i~~~l~W~~~ 190 (221)
. +...++.++.|+|||||.+++++... .. +.++.+.....+++.
T Consensus 196 ~-----~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (272)
T 3a27_A 196 H-----KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLI 246 (272)
T ss_dssp S-----SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEE
T ss_pred c-----cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeE
Confidence 3 45678999999999999999996532 23 334444555555543
No 226
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.83 E-value=7.7e-09 Score=92.07 Aligned_cols=137 Identities=10% Similarity=0.081 Sum_probs=90.5
Q ss_pred CCCCCeEEeecCcchHHHHHHhhCCC----eEEEeccCCCC-CCHHHHHHc----Ccc-ceeccccccCCCCC-CccCee
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDLKV----WVMNVVPIESP-DTLPIIYER----GLF-GLYHDWCESFNTYP-RTYDLL 136 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~~v----~vmnv~~~d~~-~~l~~a~eR----Gl~-~~~~d~~e~f~~yp-~sFDlV 136 (221)
.....+|||.|||+|+|+..++++.. ...++.++|.+ .++++|..+ |+. .+++ +..+.+.+ .+||+|
T Consensus 128 ~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~--~D~l~~~~~~~fD~I 205 (344)
T 2f8l_A 128 KKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLH--QDGLANLLVDPVDVV 205 (344)
T ss_dssp TCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEE--SCTTSCCCCCCEEEE
T ss_pred CCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEE--CCCCCccccCCccEE
Confidence 34578999999999999988876521 11468899986 477777664 441 1222 12344444 899999
Q ss_pred eecccccccccc----------------H-HHHHHHhhhhccCCeEEEEEcCh-----hhHHHHHHHHHhcCCeEEEee-
Q 027609 137 HADHLFSTIKKS----------------L-KAVVAEVDRILRPDGNLILRDDA-----ETIVEVEDLVKSLHWDVRMIY- 193 (221)
Q Consensus 137 h~~~v~~h~~~d----------------~-~~vL~EmdRVLRPGG~~ii~d~~-----~~~~~i~~i~~~l~W~~~~~~- 193 (221)
.|+--|.++..+ . ..++.++.+.|||||.+++..+. .....+.+.+..-+|-..+..
T Consensus 206 i~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~~~~ii~l 285 (344)
T 2f8l_A 206 ISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIKL 285 (344)
T ss_dssp EEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEEEEEEEEC
T ss_pred EECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhCCeEEEeeeC
Confidence 999887665421 1 25899999999999999888633 234677777666666332221
Q ss_pred -------cCCCeeEEEEEec
Q 027609 194 -------TNDNQGMLCVHKT 206 (221)
Q Consensus 194 -------~~~~e~~l~~~K~ 206 (221)
+.-..-+++.+|.
T Consensus 286 p~~~F~~~~~~~~i~vl~k~ 305 (344)
T 2f8l_A 286 PETLFKSEQARKSILILEKA 305 (344)
T ss_dssp CGGGSCC-CCCEEEEEEEEC
T ss_pred ChhhccCCCCceEEEEEECC
Confidence 1225667777774
No 227
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.81 E-value=5.2e-09 Score=95.16 Aligned_cols=118 Identities=19% Similarity=0.242 Sum_probs=79.1
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc-c-c--ee-ccccccCCCC---CCccCee
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL-F-G--LY-HDWCESFNTY---PRTYDLL 136 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl-~-~--~~-~d~~e~f~~y---p~sFDlV 136 (221)
...+|||+|||+|+|+..++..+.. .|+++|.+ .+++.+.++ |+ . . .+ .|..+.+..+ ..+||+|
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~--~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCS--QVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 4679999999999999999998642 57888886 477766654 44 3 2 12 2322211111 3689999
Q ss_pred eecc---------ccccccccHHHHHHHhhhhccCCeEEEEEcChh------hHHHHHHHHHhcCCeEE
Q 027609 137 HADH---------LFSTIKKSLKAVVAEVDRILRPDGNLILRDDAE------TIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 137 h~~~---------v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~------~~~~i~~i~~~l~W~~~ 190 (221)
.++- ++.+.. +...++.++.++|+|||+++++.+.. +.+.+++.+.....+..
T Consensus 298 i~dpP~~~~~~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~ 365 (396)
T 3c0k_A 298 VMDPPKFVENKSQLMGACR-GYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQ 365 (396)
T ss_dssp EECCSSTTTCSSSSSCCCT-HHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEE
T ss_pred EECCCCCCCChhHHHHHHH-HHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEE
Confidence 9972 222223 67889999999999999999986542 34455555555554443
No 228
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.79 E-value=4.8e-09 Score=95.06 Aligned_cols=117 Identities=21% Similarity=0.217 Sum_probs=78.4
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc--ee-ccccccCCCC---CCccCeeee
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG--LY-HDWCESFNTY---PRTYDLLHA 138 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~~-~d~~e~f~~y---p~sFDlVh~ 138 (221)
...+|||+|||+|+|+..++.. ..+|+++|.+ .+++.+.++ |+.+ .+ .|..+.+..+ +.+||+|.+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~ 285 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVL 285 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEE
Confidence 4678999999999999999886 3468889986 477776655 4432 22 2322111111 479999998
Q ss_pred ccc---------cccccccHHHHHHHhhhhccCCeEEEEEcChh------hHHHHHHHHHhcCCeEE
Q 027609 139 DHL---------FSTIKKSLKAVVAEVDRILRPDGNLILRDDAE------TIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 139 ~~v---------~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~------~~~~i~~i~~~l~W~~~ 190 (221)
+-- +.... +...++.++.|+|+|||+++++.+.. +.+.+++.+...+.+..
T Consensus 286 dpP~~~~~~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~ 351 (382)
T 1wxx_A 286 DPPAFAKGKKDVERAYR-AYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLR 351 (382)
T ss_dssp CCCCSCCSTTSHHHHHH-HHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCCCCChhHHHHHHH-HHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 521 11122 67789999999999999999997643 24445555555555443
No 229
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.78 E-value=6.8e-09 Score=96.35 Aligned_cols=121 Identities=13% Similarity=0.133 Sum_probs=78.3
Q ss_pred CCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc--e-eccccccCCC-CC-CccCeee
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG--L-YHDWCESFNT-YP-RTYDLLH 137 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~-~~d~~e~f~~-yp-~sFDlVh 137 (221)
.....+|||+|||+|+++..|++.---...++++|.+ .+++.+.++ |+.. + ..|..+ ++. |+ ++||+|.
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~-~~~~~~~~~fD~Vl 335 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARK-APEIIGEEVADKVL 335 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTC-CSSSSCSSCEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhh-cchhhccCCCCEEE
Confidence 3446799999999999999998741000146888886 477776665 5533 2 234322 332 66 8899999
Q ss_pred ec------cccccccc--------c-------HHHHHHHhhhhccCCeEEEEEcCh----hhHHHHHHHHHhc-CCeE
Q 027609 138 AD------HLFSTIKK--------S-------LKAVVAEVDRILRPDGNLILRDDA----ETIVEVEDLVKSL-HWDV 189 (221)
Q Consensus 138 ~~------~v~~h~~~--------d-------~~~vL~EmdRVLRPGG~~ii~d~~----~~~~~i~~i~~~l-~W~~ 189 (221)
++ .++.+-++ + ...+|.++.|+|||||.++++++. +..+.++.++..- .|+.
T Consensus 336 ~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~~~~~~ 413 (450)
T 2yxl_A 336 LDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPEFKL 413 (450)
T ss_dssp EECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCSSCEE
T ss_pred EcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhCCCCEE
Confidence 63 23332221 1 157899999999999999998763 2344566666654 4543
No 230
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.76 E-value=1.3e-08 Score=93.61 Aligned_cols=116 Identities=14% Similarity=0.216 Sum_probs=75.8
Q ss_pred CCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Ccc-cee-ccccccCCC-CC-CccCeee
Q 027609 67 NWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLF-GLY-HDWCESFNT-YP-RTYDLLH 137 (221)
Q Consensus 67 ~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~-~~~-~d~~e~f~~-yp-~sFDlVh 137 (221)
......+|||+|||+|+++..|++..-. ..++++|.+ .+++.+.++ |+. .++ .|..+ ++. ++ ++||+|.
T Consensus 243 ~~~~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~-~~~~~~~~~fD~Vl 320 (429)
T 1sqg_A 243 APQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY-PSQWCGEQQFDRIL 320 (429)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTC-THHHHTTCCEEEEE
T ss_pred CCCCcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhh-chhhcccCCCCEEE
Confidence 3445779999999999999999886321 357888875 578777665 442 122 23221 221 45 7999999
Q ss_pred ec------cccccccc--------c-------HHHHHHHhhhhccCCeEEEEEcCh----hhHHHHHHHHHh
Q 027609 138 AD------HLFSTIKK--------S-------LKAVVAEVDRILRPDGNLILRDDA----ETIVEVEDLVKS 184 (221)
Q Consensus 138 ~~------~v~~h~~~--------d-------~~~vL~EmdRVLRPGG~~ii~d~~----~~~~~i~~i~~~ 184 (221)
++ .++.+-++ + ...+|.++.++|||||.++++++. +..+.++.++..
T Consensus 321 ~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~ 392 (429)
T 1sqg_A 321 LDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR 392 (429)
T ss_dssp EECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHH
T ss_pred EeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHh
Confidence 53 22322221 1 147899999999999999999742 234556666554
No 231
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.75 E-value=6e-08 Score=83.45 Aligned_cols=128 Identities=9% Similarity=0.045 Sum_probs=90.6
Q ss_pred CCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc----eeccccccCCCCC-C-ccCeeeec
Q 027609 71 VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG----LYHDWCESFNTYP-R-TYDLLHAD 139 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~----~~~d~~e~f~~yp-~-sFDlVh~~ 139 (221)
..+|||+|||+|.++.+|+..+. .-.|+++|.+ .+++.|.++ |+.+ ...|+ |..++ . .||+|...
T Consensus 16 g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~---l~~l~~~~~~D~Ivia 91 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELVERGQ-IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANG---LAAFEETDQVSVITIA 91 (225)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSG---GGGCCGGGCCCEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECch---hhhcccCcCCCEEEEc
Confidence 47899999999999999999853 2357888886 477766654 5533 22343 33455 4 69988765
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEEcChhhHHHHHHHHHhcCCeEEEee---cC-CCeeEEEEEec
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVRMIY---TN-DNQGMLCVHKT 206 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~~~~~i~~i~~~l~W~~~~~~---~~-~~e~~l~~~K~ 206 (221)
..-.. -...+|.+..+.|+|+|++|++-. .-.+.+.+.+....|.+.-.. .+ .--.++++.+.
T Consensus 92 G~Gg~---~i~~Il~~~~~~L~~~~~lVlq~~-~~~~~vr~~L~~~Gf~i~~e~lv~e~~~~Yeii~~~~~ 158 (225)
T 3kr9_A 92 GMGGR---LIARILEEGLGKLANVERLILQPN-NREDDLRIWLQDHGFQIVAESILEEAGKFYEILVVEAG 158 (225)
T ss_dssp EECHH---HHHHHHHHTGGGCTTCCEEEEEES-SCHHHHHHHHHHTTEEEEEEEEEEETTEEEEEEEEEES
T ss_pred CCChH---HHHHHHHHHHHHhCCCCEEEEECC-CCHHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEeC
Confidence 44321 356889999999999999999876 457888888999999986332 22 23456777653
No 232
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.75 E-value=6.3e-09 Score=94.46 Aligned_cols=118 Identities=15% Similarity=0.083 Sum_probs=78.1
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Ccc-c--ee-ccccccCCC-C---CCccCee
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLF-G--LY-HDWCESFNT-Y---PRTYDLL 136 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~-~--~~-~d~~e~f~~-y---p~sFDlV 136 (221)
...+|||+|||+|+|+..++..+.. +|+++|.+ .+++.+.++ |+. . .+ .|..+ +.+ + .++||+|
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~--~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~-~~~~~~~~~~~fD~V 293 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGAD--EVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE-EMEKLQKKGEKFDIV 293 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH-HHHHHHHTTCCEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHH-HHHHHHhhCCCCCEE
Confidence 4679999999999999999998642 46888886 477766554 442 1 22 23222 211 1 3689999
Q ss_pred eecc---------ccccccccHHHHHHHhhhhccCCeEEEEEcChh------hHHHHHHHHHhcCCeEEE
Q 027609 137 HADH---------LFSTIKKSLKAVVAEVDRILRPDGNLILRDDAE------TIVEVEDLVKSLHWDVRM 191 (221)
Q Consensus 137 h~~~---------v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~------~~~~i~~i~~~l~W~~~~ 191 (221)
.++- ++.+.. +...++.++.|+|+|||++++.++.. +.+.+.+.+.....+..+
T Consensus 294 i~dpP~~~~~~~~~~~~~~-~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 362 (396)
T 2as0_A 294 VLDPPAFVQHEKDLKAGLR-AYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMIIAAGAKAGKFLKM 362 (396)
T ss_dssp EECCCCSCSSGGGHHHHHH-HHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTEEEEE
T ss_pred EECCCCCCCCHHHHHHHHH-HHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 9952 222223 67889999999999999999986643 234444555555544443
No 233
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.74 E-value=7.4e-09 Score=94.39 Aligned_cols=117 Identities=15% Similarity=0.144 Sum_probs=77.4
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Ccc--c--ee-ccccccCCCC---CCccCee
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLF--G--LY-HDWCESFNTY---PRTYDLL 136 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~--~--~~-~d~~e~f~~y---p~sFDlV 136 (221)
...+|||+|||+|+|+..++.+++. .|+++|.+ .+++.|.++ |+. . .+ .|..+.++.. ..+||+|
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~ga~--~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGGAM--ATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTTBS--EEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEEeeccCHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 3578999999999999999987753 46888886 588877654 443 2 22 2321111111 2589999
Q ss_pred eecccc-----cccc---ccHHHHHHHhhhhccCCeEEEEEcChh------hHHHHHHHHHhcCCe
Q 027609 137 HADHLF-----STIK---KSLKAVVAEVDRILRPDGNLILRDDAE------TIVEVEDLVKSLHWD 188 (221)
Q Consensus 137 h~~~v~-----~h~~---~d~~~vL~EmdRVLRPGG~~ii~d~~~------~~~~i~~i~~~l~W~ 188 (221)
.++--. .+.. .+...++.++.|+|+|||+++++.+.. +.+.+...+.....+
T Consensus 290 i~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 290 IIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp EECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCE
T ss_pred EECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCc
Confidence 985211 1111 156678889999999999999996543 344555556666666
No 234
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.73 E-value=7.7e-08 Score=83.89 Aligned_cols=128 Identities=10% Similarity=0.085 Sum_probs=91.0
Q ss_pred CCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc---e-eccccccCCCC-CC-ccCeeeec
Q 027609 71 VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG---L-YHDWCESFNTY-PR-TYDLLHAD 139 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~---~-~~d~~e~f~~y-p~-sFDlVh~~ 139 (221)
..+|||+|||+|.++.+|+..+. .-.|+++|.+ .+++.|.++ |+.+ + ..|..+ .+ +. .||+|...
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~---~~~~~~~~D~Ivia 97 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKNQT-ASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLA---VIEKKDAIDTIVIA 97 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG---GCCGGGCCCEEEEE
T ss_pred CCEEEEECCccHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhh---ccCccccccEEEEe
Confidence 47899999999999999999852 2357888886 478777766 5533 2 234433 33 44 59998765
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEEcChhhHHHHHHHHHhcCCeEEEe----ecCCCeeEEEEEec
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVRMI----YTNDNQGMLCVHKT 206 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~~~~~i~~i~~~l~W~~~~~----~~~~~e~~l~~~K~ 206 (221)
..--. -...+|.+..+.|+|+|+||++-.. -.+.+.+.+....|.+.-. +...--.+|.+.+.
T Consensus 98 gmGg~---lI~~IL~~~~~~L~~~~~lIlq~~~-~~~~lr~~L~~~Gf~i~~E~lv~e~~k~Yeii~~~~~ 164 (244)
T 3gnl_A 98 GMGGT---LIRTILEEGAAKLAGVTKLILQPNI-AAWQLREWSEQNNWLITSEAILREDNKVYEIMVLAPS 164 (244)
T ss_dssp EECHH---HHHHHHHHTGGGGTTCCEEEEEESS-CHHHHHHHHHHHTEEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CCchH---HHHHHHHHHHHHhCCCCEEEEEcCC-ChHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEeC
Confidence 44432 3467889999999999999999754 4778888899999997422 22234556777663
No 235
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.71 E-value=1.2e-07 Score=82.00 Aligned_cols=129 Identities=9% Similarity=0.058 Sum_probs=91.2
Q ss_pred CCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc----eeccccccCCCCC-CccCeeeecc
Q 027609 71 VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG----LYHDWCESFNTYP-RTYDLLHADH 140 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~----~~~d~~e~f~~yp-~sFDlVh~~~ 140 (221)
..+|||+|||+|.++.+|+..+. .-.|+++|.+ .+++.|.++ |+.. ...|..+.+ .+ ..||+|....
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~-~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~--~~~~~~D~IviaG 98 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQMGY-CDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAF--EEADNIDTITICG 98 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTC-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC--CGGGCCCEEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcc--ccccccCEEEEeC
Confidence 57899999999999999999852 2257888886 477776655 5432 223543322 24 3799987655
Q ss_pred ccccccccHHHHHHHhhhhccCCeEEEEEcChhhHHHHHHHHHhcCCeEEEee----cCCCeeEEEEEec
Q 027609 141 LFSTIKKSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVRMIY----TNDNQGMLCVHKT 206 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~~~~~i~~i~~~l~W~~~~~~----~~~~e~~l~~~K~ 206 (221)
.-.. -...+|.+..+.|+++|+||++-.. -.+.+.+.+....|.+.-.. ...--.++.+.+.
T Consensus 99 mGg~---lI~~IL~~~~~~l~~~~~lIlqp~~-~~~~lr~~L~~~Gf~i~~E~lv~e~~~~Yeii~~~~~ 164 (230)
T 3lec_A 99 MGGR---LIADILNNDIDKLQHVKTLVLQPNN-REDDLRKWLAANDFEIVAEDILTENDKRYEILVVKHG 164 (230)
T ss_dssp ECHH---HHHHHHHHTGGGGTTCCEEEEEESS-CHHHHHHHHHHTTEEEEEEEEEEC--CEEEEEEEEEC
T ss_pred CchH---HHHHHHHHHHHHhCcCCEEEEECCC-ChHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEeC
Confidence 4432 3568888999999999999999854 37888999999999986332 2234567777764
No 236
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.71 E-value=5.6e-09 Score=98.48 Aligned_cols=114 Identities=18% Similarity=0.217 Sum_probs=73.3
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc--ee-ccccccCCC-CCCccCeeeec-
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG--LY-HDWCESFNT-YPRTYDLLHAD- 139 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~~-~d~~e~f~~-yp~sFDlVh~~- 139 (221)
...+|||+|||+|+.+..|++.---...|+++|.+ .+++.+.++ |+.+ ++ .|. ..++. ++++||+|.|+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~-~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDG-RVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCS-TTHHHHSTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCH-HHhhhhccccCCEEEECC
Confidence 57899999999999999998751001146888886 477776665 5533 22 332 22333 35899999973
Q ss_pred -----ccccc-------ccc--------cHHHHHHHhhhhccCCeEEEEEcCh----hhHHHHHHHHHh
Q 027609 140 -----HLFST-------IKK--------SLKAVVAEVDRILRPDGNLILRDDA----ETIVEVEDLVKS 184 (221)
Q Consensus 140 -----~v~~h-------~~~--------d~~~vL~EmdRVLRPGG~~ii~d~~----~~~~~i~~i~~~ 184 (221)
.++.+ |.. ....+|.++.|+|||||.++++++. +.-+.++.++..
T Consensus 196 PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~ 264 (479)
T 2frx_A 196 PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKET 264 (479)
T ss_dssp CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHH
T ss_pred CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHH
Confidence 22221 110 1247899999999999999999763 223445555544
No 237
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.70 E-value=9.1e-09 Score=97.04 Aligned_cols=118 Identities=19% Similarity=0.182 Sum_probs=76.1
Q ss_pred CCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Ccc-cee-ccccccCCC-CCCccCeeee
Q 027609 67 NWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLF-GLY-HDWCESFNT-YPRTYDLLHA 138 (221)
Q Consensus 67 ~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~-~~~-~d~~e~f~~-yp~sFDlVh~ 138 (221)
......+|||+|||+|+.+..|+++--....|+++|.+ .+++.+.++ |+. .++ .|. ..++. ++++||+|.+
T Consensus 98 ~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da-~~l~~~~~~~FD~Il~ 176 (464)
T 3m6w_A 98 DPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPP-RALAEAFGTYFHRVLL 176 (464)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCH-HHHHHHHCSCEEEEEE
T ss_pred CcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCH-HHhhhhccccCCEEEE
Confidence 34457899999999999999998651111146888886 477776665 442 222 232 22332 3589999995
Q ss_pred c------cccccccc---------------cHHHHHHHhhhhccCCeEEEEEcCh----hhHHHHHHHHHhc
Q 027609 139 D------HLFSTIKK---------------SLKAVVAEVDRILRPDGNLILRDDA----ETIVEVEDLVKSL 185 (221)
Q Consensus 139 ~------~v~~h~~~---------------d~~~vL~EmdRVLRPGG~~ii~d~~----~~~~~i~~i~~~l 185 (221)
+ .++.+-++ ....+|.++.|+|||||.++++++. +.-+.++.+++..
T Consensus 177 D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l~~~ 248 (464)
T 3m6w_A 177 DAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAH 248 (464)
T ss_dssp ECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHC
T ss_pred CCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHHHHC
Confidence 2 22221110 1277999999999999999998763 3345566666654
No 238
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.68 E-value=2.8e-08 Score=88.44 Aligned_cols=141 Identities=10% Similarity=0.005 Sum_probs=96.3
Q ss_pred hhhhcccCCCCCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHc----Cccc--eeccccccCCCCC
Q 027609 59 SYLNGMGINWSFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYER----GLFG--LYHDWCESFNTYP 130 (221)
Q Consensus 59 ~Y~~~L~i~~~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~~~d~~e~f~~yp 130 (221)
.|...+..- ....+|||+|||+|-|+..+... +.. .+..+|.+ .+++++.++ |+.. .+.|.. ..+.+
T Consensus 122 fY~~i~~~i-~~p~~VLDLGCG~GpLAl~~~~~~p~a--~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~--~~~p~ 196 (281)
T 3lcv_B 122 FYRELFRHL-PRPNTLRDLACGLNPLAAPWMGLPAET--VYIASDIDARLVGFVDEALTRLNVPHRTNVADLL--EDRLD 196 (281)
T ss_dssp HHHHHGGGS-CCCSEEEETTCTTGGGCCTTTTCCTTC--EEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTT--TSCCC
T ss_pred HHHHHHhcc-CCCceeeeeccCccHHHHHHHhhCCCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeec--ccCCC
Confidence 455555521 34789999999999999998776 322 46788875 588888776 3332 223321 12345
Q ss_pred CccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEEcC-----------hhhHHHHHHHHHhcCCeEEEeecCCCee
Q 027609 131 RTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDD-----------AETIVEVEDLVKSLHWDVRMIYTNDNQG 199 (221)
Q Consensus 131 ~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~-----------~~~~~~i~~i~~~l~W~~~~~~~~~~e~ 199 (221)
..||++.+..+++|+.+.....+.++-.-|+|+|.||--+. ..+....++.+..-.|.+.... -+.|-
T Consensus 197 ~~~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~~~-~~nEl 275 (281)
T 3lcv_B 197 EPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQRLE-IGNEL 275 (281)
T ss_dssp SCCSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEEEE-ETTEE
T ss_pred CCcchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceeeee-ecCee
Confidence 99999999999999985334455599999999999998887 1235778888888888654322 13455
Q ss_pred EEEEEe
Q 027609 200 MLCVHK 205 (221)
Q Consensus 200 ~l~~~K 205 (221)
+.+.+|
T Consensus 276 ~y~i~k 281 (281)
T 3lcv_B 276 IYVIQK 281 (281)
T ss_dssp EEEEC-
T ss_pred EEEecC
Confidence 555543
No 239
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.68 E-value=5.9e-09 Score=102.44 Aligned_cols=117 Identities=15% Similarity=0.189 Sum_probs=79.3
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Ccc----ce-eccccccCCCCCCccCeeeec
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLF----GL-YHDWCESFNTYPRTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~----~~-~~d~~e~f~~yp~sFDlVh~~ 139 (221)
...+|||+|||+|+|+.+++..+.. .|+.+|.+ .+++.+.++ |+. .. ..|..+.+....++||+|.++
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~--~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~D 616 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGAR--STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFID 616 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEEC
T ss_pred CCCcEEEeeechhHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEEC
Confidence 3679999999999999999888753 47888987 488877665 443 11 234222111124899999986
Q ss_pred c-----------ccccccccHHHHHHHhhhhccCCeEEEEEcChhhHHHHHHHHHhcCCeE
Q 027609 140 H-----------LFSTIKKSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDV 189 (221)
Q Consensus 140 ~-----------v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~~~~~i~~i~~~l~W~~ 189 (221)
- ++.+.. +...++.++.|+|||||+++++.+......-...+....++.
T Consensus 617 PP~f~~~~~~~~~~~~~~-~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~~~l~~~g~~~ 676 (703)
T 3v97_A 617 PPTFSNSKRMEDAFDVQR-DHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKA 676 (703)
T ss_dssp CCSBC-------CCBHHH-HHHHHHHHHHHHEEEEEEEEEEECCTTCCCCHHHHHHTTEEE
T ss_pred CccccCCccchhHHHHHH-HHHHHHHHHHHhcCCCcEEEEEECCcccccCHHHHHHcCCce
Confidence 3 233333 788899999999999999999976632222234445555553
No 240
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.68 E-value=3.5e-08 Score=89.36 Aligned_cols=116 Identities=11% Similarity=0.085 Sum_probs=78.7
Q ss_pred CCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc---ccee-ccccccCCCCC-CccCeee
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL---FGLY-HDWCESFNTYP-RTYDLLH 137 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl---~~~~-~d~~e~f~~yp-~sFDlVh 137 (221)
+....+|||+|||+|+++..++..+.+. +++++|.+ .+++.|.++ |+ +... .|. ..++ ++ ++||+|.
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~-~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~-~~~~-~~~~~fD~Ii 291 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSG-EIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDA-TQLS-QYVDSVDFAI 291 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCS-CEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCG-GGGG-GTCSCEEEEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh-hhCC-cccCCcCEEE
Confidence 4567899999999999999999886532 47888886 588877765 44 2222 343 2233 44 8999999
Q ss_pred eccccccc-------cccHHHHHHHhhhhccCCeEEEEEcChhhHHHHHHHHHhcCCeEE
Q 027609 138 ADHLFSTI-------KKSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 138 ~~~v~~h~-------~~d~~~vL~EmdRVLRPGG~~ii~d~~~~~~~i~~i~~~l~W~~~ 190 (221)
|+--+..- .+-...++.++.|+| +|+.+++.... +.+++.+....|+..
T Consensus 292 ~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~~~~---~~~~~~~~~~G~~~~ 347 (373)
T 3tm4_A 292 SNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFITTEK---KAIEEAIAENGFEII 347 (373)
T ss_dssp EECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEEESCH---HHHHHHHHHTTEEEE
T ss_pred ECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEEECCH---HHHHHHHHHcCCEEE
Confidence 97554321 111267899999999 55555555544 345567788888875
No 241
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.65 E-value=1.6e-08 Score=88.47 Aligned_cols=93 Identities=14% Similarity=0.170 Sum_probs=60.7
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cc---cceeccccccCCCCC-CccCeeeec
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GL---FGLYHDWCESFNTYP-RTYDLLHAD 139 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl---~~~~~d~~e~f~~yp-~sFDlVh~~ 139 (221)
....+|||+|||+|.++..|++++. +++++|.+ ++++.+.++ |+ +.+++. .+..++ .+||+|.|+
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~---D~~~~~~~~fD~vv~n 100 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEKAK---KVVACELDPRLVAELHKRVQGTPVASKLQVLVG---DVLKTDLPFFDTCVAN 100 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHSS---EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEES---CTTTSCCCCCSEEEEE
T ss_pred CCCCEEEEEcCcccHHHHHHHhhCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc---ceecccchhhcEEEEe
Confidence 3467999999999999999998864 56888886 588887775 22 112221 122234 589999997
Q ss_pred cccccccccHH-HHH--------------HHh--hhhccCCeEEEE
Q 027609 140 HLFSTIKKSLK-AVV--------------AEV--DRILRPDGNLIL 168 (221)
Q Consensus 140 ~v~~h~~~d~~-~vL--------------~Em--dRVLRPGG~~ii 168 (221)
..++ +..... .+| .|+ .|+|||||.++.
T Consensus 101 lpy~-~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y~ 145 (285)
T 1zq9_A 101 LPYQ-ISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYC 145 (285)
T ss_dssp CCGG-GHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTCS
T ss_pred cCcc-cchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCcccc
Confidence 5443 221111 122 344 479999999753
No 242
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.60 E-value=1.6e-07 Score=82.53 Aligned_cols=139 Identities=10% Similarity=-0.086 Sum_probs=93.9
Q ss_pred hhhhcccCCCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC----ccc--eeccccccCCCCCC
Q 027609 59 SYLNGMGINWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG----LFG--LYHDWCESFNTYPR 131 (221)
Q Consensus 59 ~Y~~~L~i~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG----l~~--~~~d~~e~f~~yp~ 131 (221)
.|...++. ....+|||+|||+|-|+..+. .+. .+.+.|.+ .+++++.++. ... .+.|.. ..+.|.
T Consensus 96 fY~~i~~~--~~p~~VLDlGCG~gpLal~~~-~~~---~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~--~~~~~~ 167 (253)
T 3frh_A 96 LYDFIFSA--ETPRRVLDIACGLNPLALYER-GIA---SVWGCDIHQGLGDVITPFAREKDWDFTFALQDVL--CAPPAE 167 (253)
T ss_dssp HHHHHTSS--CCCSEEEEETCTTTHHHHHHT-TCS---EEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTT--TSCCCC
T ss_pred HHHHHhcC--CCCCeEEEecCCccHHHHHhc-cCC---eEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecc--cCCCCC
Confidence 45555554 568899999999999999887 222 36788886 5888877772 211 223321 234569
Q ss_pred ccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEEcChh-----------hHHHHHHHHHhcCCeEEEeecCCCeeE
Q 027609 132 TYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDAE-----------TIVEVEDLVKSLHWDVRMIYTNDNQGM 200 (221)
Q Consensus 132 sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~-----------~~~~i~~i~~~l~W~~~~~~~~~~e~~ 200 (221)
+||+|.+..+++|+.+.....+.++-+-|+|+|.||--++.. ....+++.+..--|.+....- +.|-+
T Consensus 168 ~~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvVsfPtksl~Gr~~gm~~~Y~~~~e~~~~~~~~~~~~~~~-~nEl~ 246 (253)
T 3frh_A 168 AGDLALIFKLLPLLEREQAGSAMALLQSLNTPRMAVSFPTRSLGGRGKGMEANYAAWFEGGLPAEFEIEDKKTI-GTELI 246 (253)
T ss_dssp BCSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEEEEECC-----------CHHHHHHHHSCTTEEEEEEEEE-TTEEE
T ss_pred CcchHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEEEcChHHhcCCCcchhhHHHHHHHHHhhccchhhhheec-CceEE
Confidence 999999998888886633344558888999999999887322 245667767777777653322 35677
Q ss_pred EEEEec
Q 027609 201 LCVHKT 206 (221)
Q Consensus 201 l~~~K~ 206 (221)
.+.+|.
T Consensus 247 ~~i~~~ 252 (253)
T 3frh_A 247 YLIKKN 252 (253)
T ss_dssp EEEEEC
T ss_pred EEEecC
Confidence 777763
No 243
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.57 E-value=5.9e-08 Score=86.34 Aligned_cols=133 Identities=13% Similarity=0.072 Sum_probs=75.8
Q ss_pred CCeEEeecCcchHHHHHHhhC-CCeE-E-EeccCCCC-CCHHHHHHcCcc-ceeccccccCCCCC-CccCeeeeccccc-
Q 027609 71 VRNVMDMRAVYGGFAAALKDL-KVWV-M-NVVPIESP-DTLPIIYERGLF-GLYHDWCESFNTYP-RTYDLLHADHLFS- 143 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~-~v~v-m-nv~~~d~~-~~l~~a~eRGl~-~~~~d~~e~f~~yp-~sFDlVh~~~v~~- 143 (221)
..+|||+|||+|+|+...+++ ++-. . -++++|.+ +.+.. ...|.. -...+-++ ...++ ..||+|.|+...+
T Consensus 75 ~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g~~ii~~~~~~d-v~~l~~~~~DlVlsD~apns 152 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLGWNIITFKDKTD-IHRLEPVKCDTLLCDIGESS 152 (277)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTTGGGEEEECSCC-TTTSCCCCCSEEEECCCCCC
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCCCCeEEEeccce-ehhcCCCCccEEEecCccCc
Confidence 558999999999999987765 4321 1 12344432 11110 011110 01111112 22355 8999999987554
Q ss_pred --ccccc--HHHHHHHhhhhccCC-eEEEEEcCh-------hhHHHHHHHHHhcCCeEEEeecCCCeeEEEEEe
Q 027609 144 --TIKKS--LKAVVAEVDRILRPD-GNLILRDDA-------ETIVEVEDLVKSLHWDVRMIYTNDNQGMLCVHK 205 (221)
Q Consensus 144 --h~~~d--~~~vL~EmdRVLRPG-G~~ii~d~~-------~~~~~i~~i~~~l~W~~~~~~~~~~e~~l~~~K 205 (221)
++.+. -..+|..+.++|||| |.||+.--. +++..++..+++.+...-..-.++.|.+++|+.
T Consensus 153 G~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~~~lk~~F~~V~~~KPaSR~~S~E~Y~V~~~ 226 (277)
T 3evf_A 153 SSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLEKLELLQRRFGGTVIRNPLSRNSTHEMYYVSGA 226 (277)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHHCCEEECCTTSCTTCCCEEEESSC
T ss_pred CchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHHHHHHHHHhcCCEEEEeCCCCCCCCceEEEEec
Confidence 23321 123578889999999 999998544 334555555555444332111345799999876
No 244
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.56 E-value=3.1e-08 Score=93.20 Aligned_cols=118 Identities=19% Similarity=0.199 Sum_probs=76.3
Q ss_pred CCCCCeEEeecCcchHHHHHHhhC--CCeEEEeccCCCC-CCHHHHHHc----Cccc--ee-ccccccCCC-CCCccCee
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDL--KVWVMNVVPIESP-DTLPIIYER----GLFG--LY-HDWCESFNT-YPRTYDLL 136 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~--~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~~-~d~~e~f~~-yp~sFDlV 136 (221)
.....+|||+|||+|+.+.+|+++ +. ..|+++|.+ .+++.+.++ |+.+ ++ .|. ..+.. ++++||+|
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~--g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da-~~l~~~~~~~FD~I 179 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGK--GLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAP-AELVPHFSGFFDRI 179 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTC--SEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCH-HHHHHHHTTCEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCH-HHhhhhccccCCEE
Confidence 445789999999999999988875 21 146788886 467666554 5433 22 232 22332 45899999
Q ss_pred eecc------cccccc---------------ccHHHHHHHhhhhccCCeEEEEEcCh----hhHHHHHHHHHhcCCe
Q 027609 137 HADH------LFSTIK---------------KSLKAVVAEVDRILRPDGNLILRDDA----ETIVEVEDLVKSLHWD 188 (221)
Q Consensus 137 h~~~------v~~h~~---------------~d~~~vL~EmdRVLRPGG~~ii~d~~----~~~~~i~~i~~~l~W~ 188 (221)
.++- ++.+-+ .....+|.++.|+|||||.++++++. +.-+.|+.++....++
T Consensus 180 l~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~~~~ 256 (456)
T 3m4x_A 180 VVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVENYPVT 256 (456)
T ss_dssp EEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEE
T ss_pred EECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHhCCCE
Confidence 9742 121111 01227899999999999999998763 3455677777665443
No 245
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.53 E-value=1.6e-07 Score=84.46 Aligned_cols=112 Identities=17% Similarity=0.208 Sum_probs=71.6
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCcccee-ccccccCCCCC-CccCeeeeccccc---
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLFGLY-HDWCESFNTYP-RTYDLLHADHLFS--- 143 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~-~d~~e~f~~yp-~sFDlVh~~~v~~--- 143 (221)
...+|||+|||+|+|+.+++++-....++.++|.+ .+++.+ .+ + .++ .|.. ...+ ..||+|.|+--+.
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-~~-~-~~~~~D~~---~~~~~~~fD~Ii~NPPy~~~~ 112 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-PW-A-EGILADFL---LWEPGEAFDLILGNPPYGIVG 112 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-TT-E-EEEESCGG---GCCCSSCEEEEEECCCCCCBS
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-CC-C-cEEeCChh---hcCccCCCCEEEECcCccCcc
Confidence 34589999999999999998751001156777774 466555 22 2 222 2321 1123 7999999952221
Q ss_pred -------cccc------------------cHHHHHHHhhhhccCCeEEEEEcChh-----hHHHHHHHHHhcCC
Q 027609 144 -------TIKK------------------SLKAVVAEVDRILRPDGNLILRDDAE-----TIVEVEDLVKSLHW 187 (221)
Q Consensus 144 -------h~~~------------------d~~~vL~EmdRVLRPGG~~ii~d~~~-----~~~~i~~i~~~l~W 187 (221)
|..+ ....++..+.++|+|||.+++-.+.. ..+++.+.+..-++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 113 EASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGK 186 (421)
T ss_dssp CTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHSE
T ss_pred cccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcCC
Confidence 1111 11266889999999999998886654 34677777777677
No 246
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.51 E-value=7.7e-08 Score=85.92 Aligned_cols=106 Identities=13% Similarity=0.062 Sum_probs=70.6
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Ccc---ceec-cccccCCCCCCccCeeeecc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLF---GLYH-DWCESFNTYPRTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~---~~~~-d~~e~f~~yp~sFDlVh~~~ 140 (221)
...+|||+|||+|+|+.. ++.+. +++++|.+ .+++.+.++ |+. ..++ |. .. +.++||+|.++-
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~~~~---~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~-~~---~~~~fD~Vi~dp 266 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CKNAK---KIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDV-RE---VDVKGNRVIMNL 266 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TTTSS---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCG-GG---CCCCEEEEEECC
T ss_pred CCCEEEEccCccCHHHHh-ccCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCh-HH---hcCCCcEEEECC
Confidence 467999999999999999 77432 46888876 477766554 442 1222 32 21 238999999862
Q ss_pred ccccccccHHHHHHHhhhhccCCeEEEEEcChhhHHHHHHHHHhc-CCe
Q 027609 141 LFSTIKKSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSL-HWD 188 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~~~~~i~~i~~~l-~W~ 188 (221)
- .....++.++.|+|+|||++++.+.....+.+.+.+... .++
T Consensus 267 P-----~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~l~~~~~~~ 310 (336)
T 2yx1_A 267 P-----KFAHKFIDKALDIVEEGGVIHYYTIGKDFDKAIKLFEKKCDCE 310 (336)
T ss_dssp T-----TTGGGGHHHHHHHEEEEEEEEEEEEESSSHHHHHHHHHHSEEE
T ss_pred c-----HhHHHHHHHHHHHcCCCCEEEEEEeecCchHHHHHHHHhcCCc
Confidence 1 123478899999999999999976544344444444444 444
No 247
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.44 E-value=2.9e-07 Score=81.32 Aligned_cols=112 Identities=17% Similarity=0.185 Sum_probs=75.7
Q ss_pred CCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHH----cCccc---eec-cccccCCCCCCccCeeeeccc
Q 027609 71 VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYE----RGLFG---LYH-DWCESFNTYPRTYDLLHADHL 141 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~e----RGl~~---~~~-d~~e~f~~yp~sFDlVh~~~v 141 (221)
..+|||+|||+|.|+-.++.++.. .|+++|.+ ..++.+.+ .|+.+ +++ | +..|. ..+.||.|..+..
T Consensus 126 g~~VlD~~aG~G~~~i~~a~~g~~--~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D-~~~~~-~~~~~D~Vi~~~p 201 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMD-NRDFP-GENIADRILMGYV 201 (278)
T ss_dssp TCEEEETTCTTTTTTHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC-TTTCC-CCSCEEEEEECCC
T ss_pred CCEEEEecCcCcHHHHHHHHhcCC--eEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCc-HHHhc-cccCCCEEEECCC
Confidence 678999999999999988887642 46788875 45555444 34533 222 3 22122 1288999887632
Q ss_pred cccccccHHHHHHHhhhhccCCeEEEEEcC-------hhhHHHHHHHHHhcCCeEEE
Q 027609 142 FSTIKKSLKAVVAEVDRILRPDGNLILRDD-------AETIVEVEDLVKSLHWDVRM 191 (221)
Q Consensus 142 ~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~-------~~~~~~i~~i~~~l~W~~~~ 191 (221)
. ....+|.+.-++|||||++.+-+. ....+.++++++...+++..
T Consensus 202 ~-----~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v~~ 253 (278)
T 3k6r_A 202 V-----RTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp S-----SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred C-----cHHHHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCCcEEE
Confidence 2 334567778899999999876432 22467788889999998754
No 248
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.43 E-value=8.4e-07 Score=82.30 Aligned_cols=96 Identities=15% Similarity=0.127 Sum_probs=64.9
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Ccc-cee-ccccccCCCCCCccCeeeecccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLF-GLY-HDWCESFNTYPRTYDLLHADHLF 142 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~-~~~-~d~~e~f~~yp~sFDlVh~~~v~ 142 (221)
...+|||+|||+|.|+..|++++. .|+++|.+ ++++.|.++ |+. ..+ .|. +.+ .+.+||+|.++--.
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~~~---~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~-~~~--~~~~fD~Vv~dPPr 363 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKRGF---NVKGFDSNEFAIEMARRNVEINNVDAEFEVASD-REV--SVKGFDTVIVDPPR 363 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCCEEEEECCT-TTC--CCTTCSEEEECCCT
T ss_pred CCCEEEEeeccchHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCcEEEEECCh-HHc--CccCCCEEEEcCCc
Confidence 467899999999999999998753 56888886 588777654 332 222 232 212 23589999987443
Q ss_pred ccccccHHHHHHHhhhhccCCeEEEEEcChhhH
Q 027609 143 STIKKSLKAVVAEVDRILRPDGNLILRDDAETI 175 (221)
Q Consensus 143 ~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~~~ 175 (221)
..+. ..++..+ +.|+|||.++++-....+
T Consensus 364 ~g~~---~~~~~~l-~~l~p~givyvsc~p~tl 392 (425)
T 2jjq_A 364 AGLH---PRLVKRL-NREKPGVIVYVSCNPETF 392 (425)
T ss_dssp TCSC---HHHHHHH-HHHCCSEEEEEESCHHHH
T ss_pred cchH---HHHHHHH-HhcCCCcEEEEECChHHH
Confidence 3222 3455555 459999999999766543
No 249
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.43 E-value=2.8e-07 Score=81.11 Aligned_cols=90 Identities=17% Similarity=0.258 Sum_probs=60.0
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc--eeccccccCCCCC-CccCeeeecc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG--LYHDWCESFNTYP-RTYDLLHADH 140 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~~~d~~e~f~~yp-~sFDlVh~~~ 140 (221)
....+|||+|||+|.++..|++++. +|+++|.+ .+++.+.++ |+.. +++ ..+..++ .+||+|.|+.
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~~~---~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~---~D~~~~~~~~~D~Vv~n~ 114 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPLAK---KVITIDIDSRMISEVKKRCLYEGYNNLEVYE---GDAIKTVFPKFDVCTANI 114 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTTSS---EEEEECSCHHHHHHHHHHHHHTTCCCEEC-------CCSSCCCCCSEEEEEC
T ss_pred CCcCEEEEEcCcCcHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHHcCCCceEEEE---CchhhCCcccCCEEEEcC
Confidence 3467999999999999999999864 57888886 588877765 3322 222 1223345 7999999975
Q ss_pred ccccccc-cHHHHH---------------HHhhhhccCCeE
Q 027609 141 LFSTIKK-SLKAVV---------------AEVDRILRPDGN 165 (221)
Q Consensus 141 v~~h~~~-d~~~vL---------------~EmdRVLRPGG~ 165 (221)
.++ +.. ....+| .+..|+++|+|.
T Consensus 115 py~-~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G~ 154 (299)
T 2h1r_A 115 PYK-ISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVGD 154 (299)
T ss_dssp CGG-GHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTTS
T ss_pred Ccc-cccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCCC
Confidence 544 332 222333 347799998885
No 250
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.42 E-value=2.3e-09 Score=91.03 Aligned_cols=94 Identities=17% Similarity=0.164 Sum_probs=60.8
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC--c--ccee-ccccccCCCCC--CccCeeeeccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG--L--FGLY-HDWCESFNTYP--RTYDLLHADHL 141 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG--l--~~~~-~d~~e~f~~yp--~sFDlVh~~~v 141 (221)
...+|||+|||+|.++..|++++. +++++|.+ ++++.+.++- . +.++ .|. +.++ ++ ++| .|.|+--
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~~~---~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~-~~~~-~~~~~~f-~vv~n~P 102 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKISK---QVTSIELDSHLFNLSSEKLKLNTRVTLIHQDI-LQFQ-FPNKQRY-KIVGNIP 102 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHHSS---EEEESSSSCSSSSSSSCTTTTCSEEEECCSCC-TTTT-CCCSSEE-EEEEECC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCC---eEEEEECCHHHHHHHHHHhccCCceEEEECCh-hhcC-cccCCCc-EEEEeCC
Confidence 467899999999999999998863 57888885 5777666552 1 1122 232 2222 44 578 6666521
Q ss_pred -----------cccccccHHHHH----HHhhhhccCCeEEEEEc
Q 027609 142 -----------FSTIKKSLKAVV----AEVDRILRPDGNLILRD 170 (221)
Q Consensus 142 -----------~~h~~~d~~~vL----~EmdRVLRPGG~~ii~d 170 (221)
+.|.. ++..++ .++.|+|+|||.+++..
T Consensus 103 y~~~~~~~~~~~~~~~-~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 103 YHLSTQIIKKVVFESR-ASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp SSSCHHHHHHHHHHCC-CEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred ccccHHHHHHHHhCCC-CCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 12222 333445 55999999999887654
No 251
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.38 E-value=3.2e-08 Score=84.59 Aligned_cols=42 Identities=17% Similarity=0.107 Sum_probs=35.4
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER 113 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR 113 (221)
....+|||+|||+|.++..|++++. .++++|.+ ++++.+.++
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~~---~v~~vD~~~~~~~~a~~~ 71 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRCN---FVTAIEIDHKLCKTTENK 71 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSS---EEEEECSCHHHHHHHHHH
T ss_pred CCCCEEEEEeCCchHHHHHHHHcCC---eEEEEECCHHHHHHHHHh
Confidence 3467999999999999999999873 57889986 588888876
No 252
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.31 E-value=5.9e-06 Score=76.21 Aligned_cols=129 Identities=15% Similarity=0.192 Sum_probs=83.0
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc--e-eccccccCCC--CC-CccCeee
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG--L-YHDWCESFNT--YP-RTYDLLH 137 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~-~~d~~e~f~~--yp-~sFDlVh 137 (221)
....+|||+|||+|.|+..|++++. .|+++|.+ ++++.|.++ |+.. . ..|+.+.+.. ++ ++||+|.
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~~~---~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv 361 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQAA---SVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVL 361 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTTSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEE
T ss_pred CCCCEEEECCCCCCHHHHHHHhhCC---EEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEE
Confidence 3467899999999999999998843 46888886 588877654 4322 2 2354443332 44 7899999
Q ss_pred eccccccccccHHHHHHHhhhhccCCeEEEEEcChhhHHHHHHHHHhcCCeEEE---ee----cCCCeeEEEEEe
Q 027609 138 ADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVRM---IY----TNDNQGMLCVHK 205 (221)
Q Consensus 138 ~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~~~~~i~~i~~~l~W~~~~---~~----~~~~e~~l~~~K 205 (221)
++--... ...++..+.+ ++|++.++++-....+.+--..+....|+... .| +..=|-+.+.+|
T Consensus 362 ~dPPr~g----~~~~~~~l~~-~~p~~ivyvsc~p~tlard~~~l~~~Gy~~~~~~~~d~Fp~t~HvE~v~ll~r 431 (433)
T 1uwv_A 362 LDPARAG----AAGVMQQIIK-LEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSR 431 (433)
T ss_dssp ECCCTTC----CHHHHHHHHH-HCCSEEEEEESCHHHHHHHHHHHHHTTCEEEEEEEECCSTTSSCCEEEEEEEC
T ss_pred ECCCCcc----HHHHHHHHHh-cCCCeEEEEECChHHHHhhHHHHHHCCcEEEEEEEeccCCCCCeEEEEEEEEE
Confidence 8632221 1234444443 79999999998777665555555656787643 22 334566655544
No 253
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.30 E-value=1.5e-06 Score=79.85 Aligned_cols=41 Identities=20% Similarity=0.414 Sum_probs=34.5
Q ss_pred CC-CccCeeeeccccccccc-------------------------------------cHHHHHHHhhhhccCCeEEEEE
Q 027609 129 YP-RTYDLLHADHLFSTIKK-------------------------------------SLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 129 yp-~sFDlVh~~~v~~h~~~-------------------------------------d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
|| +|||+||++.+||-+.+ |...+|....|.|||||.++++
T Consensus 146 fP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~ 224 (374)
T 3b5i_A 146 FPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLV 224 (374)
T ss_dssp SCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 77 99999999999984331 4556788999999999999998
No 254
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.27 E-value=3.9e-07 Score=83.78 Aligned_cols=106 Identities=17% Similarity=0.204 Sum_probs=67.3
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCcc---------------cee-ccccccCCCC--
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLF---------------GLY-HDWCESFNTY-- 129 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~---------------~~~-~d~~e~f~~y-- 129 (221)
...++|||+|||.|+++..+++++. -.++.+|.+ .+++++++. +. .++ .|..+-+..+
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~--~~Vt~VEID~~vie~Ar~~-~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~ 263 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKP--KMVTMVEIDQMVIDGCKKY-MRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK 263 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCC--SEEEEEESCHHHHHHHHHH-CCC----CCSSSEETTEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEEECChhHHHHHHHHCCC--CEEEEEECCHHHHHHHHHH-HHHhccccccccCCCcEEEEECcHHHHHHhhhc
Confidence 3678999999999999999999875 256777775 588888776 21 111 2211101112
Q ss_pred -CCccCeeeeccccccccccH-----HHHHHHh----hhhccCCeEEEEEcChhhHHH
Q 027609 130 -PRTYDLLHADHLFSTIKKSL-----KAVVAEV----DRILRPDGNLILRDDAETIVE 177 (221)
Q Consensus 130 -p~sFDlVh~~~v~~h~~~d~-----~~vL~Em----dRVLRPGG~~ii~d~~~~~~~ 177 (221)
.++||+|.+..--......| ..++.++ .|+|+|||.+++-.....+.+
T Consensus 264 ~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e 321 (364)
T 2qfm_A 264 EGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTE 321 (364)
T ss_dssp HTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHH
T ss_pred cCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHH
Confidence 37899999873220110011 3555555 899999999998865544333
No 255
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.24 E-value=2.4e-06 Score=78.84 Aligned_cols=123 Identities=15% Similarity=0.168 Sum_probs=77.8
Q ss_pred CCCCCCeEEeecCcchHHHHHHhhCC------------CeEEEeccCCCC-CCHHHHHH----cCcc----ceecccccc
Q 027609 67 NWSFVRNVMDMRAVYGGFAAALKDLK------------VWVMNVVPIESP-DTLPIIYE----RGLF----GLYHDWCES 125 (221)
Q Consensus 67 ~~~~~r~VLD~GcG~G~faa~L~~~~------------v~vmnv~~~d~~-~~l~~a~e----RGl~----~~~~d~~e~ 125 (221)
......+|||.|||+|+|...+.++- ....++.++|.. .++++|.. +|+. .+.+ +..
T Consensus 168 ~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~--gD~ 245 (445)
T 2okc_A 168 NPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVC--EDS 245 (445)
T ss_dssp CCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEE--CCT
T ss_pred CCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEee--CCC
Confidence 34456789999999999998876530 001135777775 47776654 3442 2222 122
Q ss_pred CCCCC-CccCeeeeccccccccc-c---------------HHHHHHHhhhhccCCeEEEEEcChhhH------HHHHH-H
Q 027609 126 FNTYP-RTYDLLHADHLFSTIKK-S---------------LKAVVAEVDRILRPDGNLILRDDAETI------VEVED-L 181 (221)
Q Consensus 126 f~~yp-~sFDlVh~~~v~~h~~~-d---------------~~~vL~EmdRVLRPGG~~ii~d~~~~~------~~i~~-i 181 (221)
+..-+ ..||+|.|+--|.+... + ...++.++.|+|||||.+++-.++..+ ..+.+ +
T Consensus 246 l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~~L~~~~~~~~iR~~L 325 (445)
T 2okc_A 246 LEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDNVLFEAGAGETIRKRL 325 (445)
T ss_dssp TTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCSTHHHHHHHHH
T ss_pred CCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCcccccCcHHHHHHHHH
Confidence 32222 68999999977765321 1 247899999999999999887765432 44554 5
Q ss_pred HHhcCCeEEE
Q 027609 182 VKSLHWDVRM 191 (221)
Q Consensus 182 ~~~l~W~~~~ 191 (221)
+....++..+
T Consensus 326 ~~~~~l~~ii 335 (445)
T 2okc_A 326 LQDFNLHTIL 335 (445)
T ss_dssp HHHEEEEEEE
T ss_pred HhcCcEEEEE
Confidence 5565565543
No 256
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.16 E-value=9.4e-07 Score=78.78 Aligned_cols=132 Identities=13% Similarity=0.023 Sum_probs=74.7
Q ss_pred CCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHH---cCc-cceeccccccCCCCC-CccCeeeeccccc
Q 027609 71 VRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYE---RGL-FGLYHDWCESFNTYP-RTYDLLHADHLFS 143 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~e---RGl-~~~~~d~~e~f~~yp-~sFDlVh~~~v~~ 143 (221)
..+|||+|||+|+|+...+++ ++ .++.+++.. ++...+.. .|. +-...+-++ +..++ +.||+|.|+....
T Consensus 91 ~~~VLDLGaAPGGWsQvAa~~~gv--~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~d-v~~l~~~~~DvVLSDmApn 167 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAASLKNV--KKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTD-VFNMEVIPGDTLLCDIGES 167 (282)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTE--EEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCC-GGGSCCCCCSEEEECCCCC
T ss_pred CCEEEEeCCCCCHHHHHHHHhcCC--CeeeeEEeccCccccccccccCCCceEEeeCCcc-hhhcCCCCcCEEEecCccC
Confidence 568999999999999987754 43 245555542 11100000 011 001111112 22345 8999999997765
Q ss_pred ---cccc--cHHHHHHHhhhhccCC--eEEEEEcCh-------hhHHHHHHHHHhcCCeEEEeecCCCeeEEEEEe
Q 027609 144 ---TIKK--SLKAVVAEVDRILRPD--GNLILRDDA-------ETIVEVEDLVKSLHWDVRMIYTNDNQGMLCVHK 205 (221)
Q Consensus 144 ---h~~~--d~~~vL~EmdRVLRPG--G~~ii~d~~-------~~~~~i~~i~~~l~W~~~~~~~~~~e~~l~~~K 205 (221)
+..+ .-..+|.=+.++|||| |.|++.--. .++..++..+++.+...-..-.++.|.++||+.
T Consensus 168 sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~~l~~~lk~~F~~V~~~KPaSR~~S~E~Y~V~~~ 243 (282)
T 3gcz_A 168 SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLIMEELSRLQLKHGGGLVRVPLSRNSTHEMYWVSGT 243 (282)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHHHHHHHHHHHHHCCEEECCTTSCTTCCCEEEETTC
T ss_pred CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccHHHHHHHHHHhcCCEEEEcCCCcccCcceeEEEec
Confidence 1111 1112344457899999 999998433 345556665655544432111345799999876
No 257
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.02 E-value=0.0001 Score=68.00 Aligned_cols=128 Identities=13% Similarity=0.215 Sum_probs=79.0
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHcCccceeccccccCCCCC--CccCeeeeccccccccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYP--RTYDLLHADHLFSTIKK 147 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eRGl~~~~~d~~e~f~~yp--~sFDlVh~~~v~~h~~~ 147 (221)
...+|||+||.+||++..|++++.. |+++|...|-+...+.+. +.|--+..|..-| +.||+|.|..+.
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~rg~~---V~aVD~~~l~~~l~~~~~--V~~~~~d~~~~~~~~~~~D~vvsDm~~----- 280 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKRNMW---VYSVDNGPMAQSLMDTGQ--VTWLREDGFKFRPTRSNISWMVCDMVE----- 280 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCE---EEEECSSCCCHHHHTTTC--EEEECSCTTTCCCCSSCEEEEEECCSS-----
T ss_pred CCCEEEEeCcCCCHHHHHHHHCCCE---EEEEEhhhcChhhccCCC--eEEEeCccccccCCCCCcCEEEEcCCC-----
Confidence 4789999999999999999999864 577776556555544433 3221122333223 689999998655
Q ss_pred cHHHHHHHhhhhccCC---eEEEEE----cC-----hhhHHHHHHHHHhcC--CeEEEe--ecCCCeeEEEEEeccc
Q 027609 148 SLKAVVAEVDRILRPD---GNLILR----DD-----AETIVEVEDLVKSLH--WDVRMI--YTNDNQGMLCVHKTYW 208 (221)
Q Consensus 148 d~~~vL~EmdRVLRPG---G~~ii~----d~-----~~~~~~i~~i~~~l~--W~~~~~--~~~~~e~~l~~~K~~w 208 (221)
+|..++.-|.+.|..| +.++.- +. .+.++.+.+.+.+-. ...... .|+..|..+.++| .|
T Consensus 281 ~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~~l~~~~~~i~~~l~~~g~~~~l~akhL~hdReEiTV~~rk-~~ 356 (375)
T 4auk_A 281 KPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVRR-IW 356 (375)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEEEECCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTCSSEEEEEEEE-CC
T ss_pred ChHHhHHHHHHHHhccccceEEEEEEecccchHHHHHHHHHHHHHHHHhcCcchhheehhhccCCcEEEEEEEe-ch
Confidence 5778888888888776 444332 11 122445555554433 333332 3555667777766 44
No 258
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.00 E-value=9e-06 Score=74.41 Aligned_cols=99 Identities=14% Similarity=0.171 Sum_probs=64.1
Q ss_pred CCCeEEeecCcchHHHHHHhhC---------------CCeEEEeccCCCC-CCHHHHHHcCccc-------ee-cccccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDL---------------KVWVMNVVPIESP-DTLPIIYERGLFG-------LY-HDWCES 125 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~---------------~v~vmnv~~~d~~-~~l~~a~eRGl~~-------~~-~d~~e~ 125 (221)
..-+|+|+||++|..+..+++. +...+.|.--|.+ +.-..++.+ |++ .+ .....+
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~-L~~~~~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRS-LPIENDVDGVCFINGVPGS 129 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTT-TTTSCSCTTCEEEEEEESC
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHh-cchhcccCCCEEEEecchh
Confidence 4567999999999866655444 2334566667765 455555554 332 11 111122
Q ss_pred C--CCCC-CccCeeeeccccccccc--------------------------------cHHHHHHHhhhhccCCeEEEEE
Q 027609 126 F--NTYP-RTYDLLHADHLFSTIKK--------------------------------SLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 126 f--~~yp-~sFDlVh~~~v~~h~~~--------------------------------d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
| -.|| +|||+||++.++|-+.+ |...+|.=..|.|+|||.+++.
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~ 208 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLT 208 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 2 1378 99999999998873221 2334477779999999999998
No 259
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.98 E-value=9.7e-06 Score=72.80 Aligned_cols=133 Identities=17% Similarity=0.126 Sum_probs=75.4
Q ss_pred CCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCH--HHH-HHcCc-cceeccccccCCCCC-CccCeeeecccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTL--PII-YERGL-FGLYHDWCESFNTYP-RTYDLLHADHLF 142 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l--~~a-~eRGl-~~~~~d~~e~f~~yp-~sFDlVh~~~v~ 142 (221)
..++|||+||++|+|+..++++ ++ ..+.++|.. ++. +.. ...|. +-...+-++ +-.++ ..||+|.|+...
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~gv--~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~d-i~~l~~~~~DlVlsD~AP 157 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKEV--MSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSN-VFTMPTEPSDTLLCDIGE 157 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTE--EEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCC-TTTSCCCCCSEEEECCCC
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcCC--ceeeeEEeccccccccccccccCCceEEeecCce-eeecCCCCcCEEeecCcC
Confidence 5889999999999999999986 43 245555542 110 000 00010 001111112 22344 899999998665
Q ss_pred c---cccc--cHHHHHHHhhhhccCC-eEEEEEcCh-------hhHHHHHHHHHhcCCeEEEeecCCCeeEEEEEe
Q 027609 143 S---TIKK--SLKAVVAEVDRILRPD-GNLILRDDA-------ETIVEVEDLVKSLHWDVRMIYTNDNQGMLCVHK 205 (221)
Q Consensus 143 ~---h~~~--d~~~vL~EmdRVLRPG-G~~ii~d~~-------~~~~~i~~i~~~l~W~~~~~~~~~~e~~l~~~K 205 (221)
. +..+ .-..+|.=+.++|+|| |.|++.--. ..+..++..+.+.+...-..-.++.|.++||..
T Consensus 158 nsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll~~lk~~F~~V~~~KPaSR~~S~E~Y~V~~~ 233 (300)
T 3eld_A 158 SSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQLRFGGGIVRVPFSRNSTHEMYYISGA 233 (300)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHHHHHHHHHHHCCEEECCTTSCTTCCCEEEESSC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHHHHHHHHHHhCCcEEEEeCCCCCCChHHeeeccC
Confidence 4 1111 0122343347899999 999998444 345556665555544332111345799999876
No 260
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.98 E-value=1.2e-06 Score=80.80 Aligned_cols=99 Identities=16% Similarity=0.180 Sum_probs=57.0
Q ss_pred CCeEEeecCcchHHHHHHhhC----------------CCeEEEeccCCCC--C--CH----H-----HHHHcCc-cc-ee
Q 027609 71 VRNVMDMRAVYGGFAAALKDL----------------KVWVMNVVPIESP--D--TL----P-----IIYERGL-FG-LY 119 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~----------------~v~vmnv~~~d~~--~--~l----~-----~a~eRGl-~~-~~ 119 (221)
.-+|+|+||++|..+..+++. ....+.|.--|.+ + +| + ...+.|. .+ .+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 678999999999877766544 0123455555554 1 11 1 1122221 11 11
Q ss_pred -ccccccCC--CCC-CccCeeeeccccccccccH-----------------------HHH---------------HHHhh
Q 027609 120 -HDWCESFN--TYP-RTYDLLHADHLFSTIKKSL-----------------------KAV---------------VAEVD 157 (221)
Q Consensus 120 -~d~~e~f~--~yp-~sFDlVh~~~v~~h~~~d~-----------------------~~v---------------L~Emd 157 (221)
.....+|- .|| +|||+||++.+||-+.+-| ..+ |.=..
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11112221 277 9999999999997333211 112 44448
Q ss_pred hhccCCeEEEEE
Q 027609 158 RILRPDGNLILR 169 (221)
Q Consensus 158 RVLRPGG~~ii~ 169 (221)
|.|+|||.+++.
T Consensus 213 ~eL~pGG~mvl~ 224 (384)
T 2efj_A 213 EELISRGRMLLT 224 (384)
T ss_dssp HHEEEEEEEEEE
T ss_pred HHhccCCeEEEE
Confidence 999999999998
No 261
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=97.92 E-value=8.3e-06 Score=74.54 Aligned_cols=107 Identities=14% Similarity=0.216 Sum_probs=69.6
Q ss_pred CCCCCCeEEeecCcchHHHHHHhhCCCe-------------------------------------EEEeccCCCC-CCHH
Q 027609 67 NWSFVRNVMDMRAVYGGFAAALKDLKVW-------------------------------------VMNVVPIESP-DTLP 108 (221)
Q Consensus 67 ~~~~~r~VLD~GcG~G~faa~L~~~~v~-------------------------------------vmnv~~~d~~-~~l~ 108 (221)
.+.....|||.+||+|+|+..++..+.. ...|.++|.+ .+++
T Consensus 192 ~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~ 271 (385)
T 3ldu_A 192 PWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESID 271 (385)
T ss_dssp CCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHH
T ss_pred CCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHH
Confidence 4556789999999999998766543210 0247888886 5888
Q ss_pred HHHHc----Cccc---ee-ccccccCCCCCCccCeeeecccccc-cc--ccHHHHHHHhhhhccC--CeEEEEEcChhhH
Q 027609 109 IIYER----GLFG---LY-HDWCESFNTYPRTYDLLHADHLFST-IK--KSLKAVVAEVDRILRP--DGNLILRDDAETI 175 (221)
Q Consensus 109 ~a~eR----Gl~~---~~-~d~~e~f~~yp~sFDlVh~~~v~~h-~~--~d~~~vL~EmdRVLRP--GG~~ii~d~~~~~ 175 (221)
.|.++ |+.. .. .|..+ ++ .+.+||+|.|+-=+.. +. .+...+..+|.++||+ ||.+++-..++.+
T Consensus 272 ~Ar~Na~~~gl~~~i~~~~~D~~~-l~-~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~~l 349 (385)
T 3ldu_A 272 IARENAEIAGVDEYIEFNVGDATQ-FK-SEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSYEDF 349 (385)
T ss_dssp HHHHHHHHHTCGGGEEEEECCGGG-CC-CSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESCTTH
T ss_pred HHHHHHHHcCCCCceEEEECChhh-cC-cCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECCHHH
Confidence 77765 4432 22 23222 22 3489999999755431 22 1567788889999987 8877766655443
No 262
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.89 E-value=2.3e-05 Score=70.55 Aligned_cols=123 Identities=11% Similarity=0.083 Sum_probs=73.3
Q ss_pred CCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc----Cccc--ee-ccccccCCCCC------------
Q 027609 71 VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER----GLFG--LY-HDWCESFNTYP------------ 130 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~~-~d~~e~f~~yp------------ 130 (221)
..+|||+|||+|+|+..|+.... .|+++|.+ .+++.|.+. |+.+ .+ .|..+.++.++
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~~---~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~ 290 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNFD---RVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGID 290 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGSS---EEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSC
T ss_pred CCEEEEccCCCCHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccc
Confidence 36799999999999999988533 57888886 477766543 4422 22 22211111112
Q ss_pred ---CccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEEcChhh--HHHHHHHHHhcCCeEEE---ee----cCCCe
Q 027609 131 ---RTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDAET--IVEVEDLVKSLHWDVRM---IY----TNDNQ 198 (221)
Q Consensus 131 ---~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~~--~~~i~~i~~~l~W~~~~---~~----~~~~e 198 (221)
.+||+|.++-=. ..+..++.++|+|+|.+++..+++. ...++.+..+ |++.. .| +..=|
T Consensus 291 ~~~~~fD~Vv~dPPr-------~g~~~~~~~~l~~~g~ivyvsc~p~t~ard~~~l~~~--y~~~~~~~~D~FP~T~HvE 361 (369)
T 3bt7_A 291 LKSYQCETIFVDPPR-------SGLDSETEKMVQAYPRILYISCNPETLCKNLETLSQT--HKVERLALFDQFPYTHHMQ 361 (369)
T ss_dssp GGGCCEEEEEECCCT-------TCCCHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHH--EEEEEEEEECCSTTSSCCE
T ss_pred cccCCCCEEEECcCc-------cccHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhhC--cEEEEEEeeccCCCCCcEE
Confidence 279999765211 1234567788889999888877653 3444544433 66532 22 34456
Q ss_pred eEEEEEe
Q 027609 199 GMLCVHK 205 (221)
Q Consensus 199 ~~l~~~K 205 (221)
-+.+.+|
T Consensus 362 ~v~ll~r 368 (369)
T 3bt7_A 362 CGVLLTA 368 (369)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 6655544
No 263
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.82 E-value=6.8e-06 Score=75.16 Aligned_cols=93 Identities=16% Similarity=0.086 Sum_probs=62.6
Q ss_pred CCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHc-------------------Ccc--ceec-ccccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYER-------------------GLF--GLYH-DWCES 125 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eR-------------------Gl~--~~~~-d~~e~ 125 (221)
...+|||+|||+|.++..++.+ +.. .|+.+|.+ ++++.+.+. |+. .+++ |..+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~--~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~ 124 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAE--EVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRL 124 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCS--EEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCC--eEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHH
Confidence 4678999999999999998886 422 36778875 466655543 442 1222 32221
Q ss_pred CCCCCCccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 126 FNTYPRTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 126 f~~yp~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
+...++.||+|.++- + - .+..++...-|.|||||.++++
T Consensus 125 ~~~~~~~fD~I~lDP-~---~-~~~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 125 MAERHRYFHFIDLDP-F---G-SPMEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp HHHSTTCEEEEEECC-S---S-CCHHHHHHHHHHEEEEEEEEEE
T ss_pred HHhccCCCCEEEeCC-C---C-CHHHHHHHHHHhcCCCCEEEEE
Confidence 111246899999653 2 2 3468888999999999999887
No 264
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.73 E-value=3.7e-05 Score=68.40 Aligned_cols=114 Identities=15% Similarity=0.088 Sum_probs=68.1
Q ss_pred CCCCCeEEeecCcchHHHHHHhhC--CCeEEEeccCCCC-CCHHHHHHc----Cccc--ee-ccccccCCCC-C--CccC
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDL--KVWVMNVVPIESP-DTLPIIYER----GLFG--LY-HDWCESFNTY-P--RTYD 134 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~--~v~vmnv~~~d~~-~~l~~a~eR----Gl~~--~~-~d~~e~f~~y-p--~sFD 134 (221)
.....+|||+|||+|+.+..|++. +. ..|+++|.+ .+++.+.++ |+.. ++ .|.. .+.+. + .+||
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~--g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~-~~~~~~~~~~~fD 176 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQ--GKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFL-AVSPSDPRYHEVH 176 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGG-GSCTTCGGGTTEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChH-hcCccccccCCCC
Confidence 344679999999999999998874 21 146788876 467666554 5532 22 3432 23322 2 5799
Q ss_pred eeeec------ccccccc----------cc-------HHHHHHHhhhhccCCeEEEEEcCh----hhHHHHHHHHHhc
Q 027609 135 LLHAD------HLFSTIK----------KS-------LKAVVAEVDRILRPDGNLILRDDA----ETIVEVEDLVKSL 185 (221)
Q Consensus 135 lVh~~------~v~~h~~----------~d-------~~~vL~EmdRVLRPGG~~ii~d~~----~~~~~i~~i~~~l 185 (221)
.|.++ .++..-+ ++ ...+|....+.|+ ||.++.+++. +.-+.++.+++..
T Consensus 177 ~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~Ene~~v~~~l~~~ 253 (309)
T 2b9e_A 177 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEENEDVVRDALQQN 253 (309)
T ss_dssp EEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGGTHHHHHHHHTTS
T ss_pred EEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHHhHHHHHHHHHhC
Confidence 99963 2222100 01 1246777888887 9999998653 3345566666543
No 265
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.73 E-value=1.9e-05 Score=72.81 Aligned_cols=94 Identities=14% Similarity=0.057 Sum_probs=63.7
Q ss_pred CCCeEEeecCcchHHHHHHhhC--CCeEEEeccCCCC-CCHHHHHHc----Cccc----ee-ccccccCC-CCCCccCee
Q 027609 70 FVRNVMDMRAVYGGFAAALKDL--KVWVMNVVPIESP-DTLPIIYER----GLFG----LY-HDWCESFN-TYPRTYDLL 136 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~--~v~vmnv~~~d~~-~~l~~a~eR----Gl~~----~~-~d~~e~f~-~yp~sFDlV 136 (221)
...+|||++||+|+|+-.++++ |+ -.|+.+|.+ +.++.+.+. |+.+ ++ .|..+-+. .+++.||+|
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga--~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V 129 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCV--EKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYV 129 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCE--EEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEE
Confidence 3678999999999999988874 43 257888875 455554443 4432 22 23222121 235789999
Q ss_pred eeccccccccccHHHHHHHhhhhccCCeEEEEEc
Q 027609 137 HADHLFSTIKKSLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 137 h~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
.++- +. .+..++...-+.|+|||+++++-
T Consensus 130 ~lDP----~g-~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 130 DLDP----FG-TPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EECC----SS-CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECC----Cc-CHHHHHHHHHHHhCCCCEEEEEe
Confidence 9874 22 34678888999999999998873
No 266
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.71 E-value=4.8e-05 Score=74.42 Aligned_cols=126 Identities=14% Similarity=0.090 Sum_probs=73.3
Q ss_pred CCcccchhhhhhhHHHHHhhhhh---ccc--CCCCCCCeEEeecCcchHH---HHHHhhCCCeEEEeccCCCCC----CH
Q 027609 40 AAPEDFTADYQHWKNVVSKSYLN---GMG--INWSFVRNVMDMRAVYGGF---AAALKDLKVWVMNVVPIESPD----TL 107 (221)
Q Consensus 40 ~~~~~f~~d~~~W~~~v~~~Y~~---~L~--i~~~~~r~VLD~GcG~G~f---aa~L~~~~v~vmnv~~~d~~~----~l 107 (221)
.++|.|+.|.-.-..--+..+.. .+. =...+...|||+|||+|-+ +..-.+++..-+.|..++.+. ++
T Consensus 322 ~tYevFEkD~vKy~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~ 401 (637)
T 4gqb_A 322 QTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTL 401 (637)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHH
T ss_pred hhhhhhcCChhhHHHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHH
Confidence 46889999975543221111111 111 1223456799999999977 333333332233566766643 55
Q ss_pred HHHHHcCccc---eeccccccCCCCCCccCeeeecc--ccccccccHHHHHHHhhhhccCCeEEE
Q 027609 108 PIIYERGLFG---LYHDWCESFNTYPRTYDLLHADH--LFSTIKKSLKAVVAEVDRILRPDGNLI 167 (221)
Q Consensus 108 ~~a~eRGl~~---~~~d~~e~f~~yp~sFDlVh~~~--v~~h~~~d~~~vL~EmdRVLRPGG~~i 167 (221)
+...+.|+-+ +++.-.|.+ ..|...|+|.+-- .|-... ..-.+|.=.+|.|||||.++
T Consensus 402 ~~v~~N~~~dkVtVI~gd~eev-~LPEKVDIIVSEwMG~fLl~E-~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 402 ENWQFEEWGSQVTVVSSDMREW-VAPEKADIIVSELLGSFADNE-LSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp HHHHHHTTGGGEEEEESCTTTC-CCSSCEEEEECCCCBTTBGGG-CHHHHHHHHGGGEEEEEEEE
T ss_pred HHHHhccCCCeEEEEeCcceec-cCCcccCEEEEEcCccccccc-CCHHHHHHHHHhcCCCcEEc
Confidence 5666667643 455333433 2578999999862 222222 23367888899999999875
No 267
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=97.71 E-value=2.6e-05 Score=71.51 Aligned_cols=107 Identities=12% Similarity=0.181 Sum_probs=67.2
Q ss_pred CCCCCCeEEeecCcchHHHHHHhhCCCe-------------------------------------EEEeccCCCC-CCHH
Q 027609 67 NWSFVRNVMDMRAVYGGFAAALKDLKVW-------------------------------------VMNVVPIESP-DTLP 108 (221)
Q Consensus 67 ~~~~~r~VLD~GcG~G~faa~L~~~~v~-------------------------------------vmnv~~~d~~-~~l~ 108 (221)
.+.....|||.+||+|+|+...+..+.. -..++++|.+ .+++
T Consensus 198 ~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~ 277 (393)
T 3k0b_A 198 SWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIE 277 (393)
T ss_dssp CCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHH
T ss_pred CCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHH
Confidence 4556788999999999997655432110 0246888886 5888
Q ss_pred HHHHc----Cccc---ee-ccccccCCCCCCccCeeeecccccc-cc--ccHHHHHHHhhhhccC--CeEEEEEcChhhH
Q 027609 109 IIYER----GLFG---LY-HDWCESFNTYPRTYDLLHADHLFST-IK--KSLKAVVAEVDRILRP--DGNLILRDDAETI 175 (221)
Q Consensus 109 ~a~eR----Gl~~---~~-~d~~e~f~~yp~sFDlVh~~~v~~h-~~--~d~~~vL~EmdRVLRP--GG~~ii~d~~~~~ 175 (221)
.|.++ |+.+ .. .|..+ ++ .+.+||+|.|+-=+.. +. .+...+..+|-++||+ ||.+++-..++.+
T Consensus 278 ~Ar~Na~~~gl~~~I~~~~~D~~~-~~-~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~~l 355 (393)
T 3k0b_A 278 IAKQNAVEAGLGDLITFRQLQVAD-FQ-TEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTSYELF 355 (393)
T ss_dssp HHHHHHHHTTCTTCSEEEECCGGG-CC-CCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEECCTTH
T ss_pred HHHHHHHHcCCCCceEEEECChHh-CC-CCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEECCHHH
Confidence 77665 4432 22 34322 22 3489999999844321 11 1456677888888887 8877666655443
No 268
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.59 E-value=6.1e-05 Score=69.00 Aligned_cols=106 Identities=13% Similarity=0.223 Sum_probs=67.5
Q ss_pred CCCCCCeEEeecCcchHHHHHHhhC--CC-----------------------------------eEEEeccCCCC-CCHH
Q 027609 67 NWSFVRNVMDMRAVYGGFAAALKDL--KV-----------------------------------WVMNVVPIESP-DTLP 108 (221)
Q Consensus 67 ~~~~~r~VLD~GcG~G~faa~L~~~--~v-----------------------------------~vmnv~~~d~~-~~l~ 108 (221)
.+.....|||.+||+|+|+...+.. +. .-..+.++|.+ .+++
T Consensus 191 ~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~ 270 (384)
T 3ldg_A 191 NWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVE 270 (384)
T ss_dssp TCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHH
T ss_pred CCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHH
Confidence 4556789999999999997655432 21 00246888886 5888
Q ss_pred HHHHc----Cccc---ee-ccccccCCCCCCccCeeeeccccc-ccc--ccHHHHHHHhhhhccC--CeEEEEEcChhh
Q 027609 109 IIYER----GLFG---LY-HDWCESFNTYPRTYDLLHADHLFS-TIK--KSLKAVVAEVDRILRP--DGNLILRDDAET 174 (221)
Q Consensus 109 ~a~eR----Gl~~---~~-~d~~e~f~~yp~sFDlVh~~~v~~-h~~--~d~~~vL~EmdRVLRP--GG~~ii~d~~~~ 174 (221)
.|.++ |+.+ .. .|..+ ++ .+.+||+|.|+-=+. .+. .+...+..+|-++||+ ||.+++-..+..
T Consensus 271 ~Ar~Na~~~gl~~~I~~~~~D~~~-l~-~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~~ 347 (384)
T 3ldg_A 271 IARKNAREVGLEDVVKLKQMRLQD-FK-TNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTNDTD 347 (384)
T ss_dssp HHHHHHHHTTCTTTEEEEECCGGG-CC-CCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESCTT
T ss_pred HHHHHHHHcCCCCceEEEECChHH-CC-ccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECCHH
Confidence 77654 4432 22 24322 32 347999999984332 111 1567788888888887 887776666544
No 269
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=97.53 E-value=9.2e-05 Score=65.67 Aligned_cols=69 Identities=13% Similarity=0.048 Sum_probs=48.2
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcC----cccee-ccccccCCCCC-CccCeeeeccc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERG----LFGLY-HDWCESFNTYP-RTYDLLHADHL 141 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRG----l~~~~-~d~~e~f~~yp-~sFDlVh~~~v 141 (221)
....+|||+|||+|.++..|++++. +|+++|.+ ++++.+.++- -+.++ .|. ..+ +++ .+||.|.++.-
T Consensus 49 ~~~~~VLEIG~G~G~lT~~La~~~~---~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~-l~~-~~~~~~fD~Iv~NlP 123 (295)
T 3gru_A 49 TKDDVVLEIGLGKGILTEELAKNAK---KVYVIEIDKSLEPYANKLKELYNNIEIIWGDA-LKV-DLNKLDFNKVVANLP 123 (295)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSS---EEEEEESCGGGHHHHHHHHHHCSSEEEEESCT-TTS-CGGGSCCSEEEEECC
T ss_pred CCcCEEEEECCCchHHHHHHHhcCC---EEEEEECCHHHHHHHHHHhccCCCeEEEECch-hhC-CcccCCccEEEEeCc
Confidence 3467899999999999999999854 46788875 5888887761 12233 332 212 355 67999998854
Q ss_pred c
Q 027609 142 F 142 (221)
Q Consensus 142 ~ 142 (221)
+
T Consensus 124 y 124 (295)
T 3gru_A 124 Y 124 (295)
T ss_dssp G
T ss_pred c
Confidence 4
No 270
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.50 E-value=3.5e-05 Score=66.74 Aligned_cols=73 Identities=18% Similarity=0.151 Sum_probs=46.1
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC--------CCHHHHHHc----Cc---cceec-cccccCCCCC--
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP--------DTLPIIYER----GL---FGLYH-DWCESFNTYP-- 130 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~--------~~l~~a~eR----Gl---~~~~~-d~~e~f~~yp-- 130 (221)
....+|||+|||+|.++..|+.++.. |+++|.+ ++++.+.++ |+ +.+++ |..+.++.++
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g~~---V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~ 158 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLGLT---VTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKT 158 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTTCC---EEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHH
T ss_pred CCcCeEEEeeCccCHHHHHHHHhCCE---EEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhcc
Confidence 34578999999999999999998643 5677763 455555443 22 22332 3222122244
Q ss_pred -CccCeeeecccccc
Q 027609 131 -RTYDLLHADHLFST 144 (221)
Q Consensus 131 -~sFDlVh~~~v~~h 144 (221)
++||+|.++-.|.|
T Consensus 159 ~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 159 QGKPDIVYLDPMYPE 173 (258)
T ss_dssp HCCCSEEEECCCC--
T ss_pred CCCccEEEECCCCCC
Confidence 79999999877765
No 271
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.43 E-value=0.00012 Score=69.76 Aligned_cols=138 Identities=10% Similarity=0.079 Sum_probs=82.2
Q ss_pred CCCCCCeEEeecCcchHHHHHHhhC----CC-------------eEEEeccCCCC-CCHHHHHHc----Ccc-------c
Q 027609 67 NWSFVRNVMDMRAVYGGFAAALKDL----KV-------------WVMNVVPIESP-DTLPIIYER----GLF-------G 117 (221)
Q Consensus 67 ~~~~~r~VLD~GcG~G~faa~L~~~----~v-------------~vmnv~~~d~~-~~l~~a~eR----Gl~-------~ 117 (221)
......+|||.+||+|+|...+.++ .. ...++.++|.. .++.+|..+ |+. .
T Consensus 166 ~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~ 245 (541)
T 2ar0_A 166 KPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGA 245 (541)
T ss_dssp CCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBS
T ss_pred ccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCC
Confidence 3445678999999999998776543 10 01146777775 477777653 442 2
Q ss_pred eeccccccCCC--CC-CccCeeeecccccccc-------------ccHHHHHHHhhhhccCCeEEEEEcChhhH------
Q 027609 118 LYHDWCESFNT--YP-RTYDLLHADHLFSTIK-------------KSLKAVVAEVDRILRPDGNLILRDDAETI------ 175 (221)
Q Consensus 118 ~~~d~~e~f~~--yp-~sFDlVh~~~v~~h~~-------------~d~~~vL~EmdRVLRPGG~~ii~d~~~~~------ 175 (221)
+.+ +..|.. ++ ..||+|.++--|.... .....++..+.+.|||||.+++--++.++
T Consensus 246 I~~--gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~~L~~~~~~ 323 (541)
T 2ar0_A 246 IRL--GNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKG 323 (541)
T ss_dssp EEE--SCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCCTHH
T ss_pred eEe--CCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCcceecCcHH
Confidence 222 122321 33 7899999986554322 11247899999999999999888766543
Q ss_pred HHHHHH-HHhcCCeEEEee-------cCCCeeEEEEEec
Q 027609 176 VEVEDL-VKSLHWDVRMIY-------TNDNQGMLCVHKT 206 (221)
Q Consensus 176 ~~i~~i-~~~l~W~~~~~~-------~~~~e~~l~~~K~ 206 (221)
.++.+. ++.-.....+.. +.-.--||+.+|.
T Consensus 324 ~~iR~~L~~~~~l~~ii~Lp~~~F~~t~v~t~Ilvl~k~ 362 (541)
T 2ar0_A 324 TDIRRDLMDKCHLHTILRLPTGIFYAQGVKTNVLFFTKG 362 (541)
T ss_dssp HHHHHHHHHHEEEEEEEECCSSCSSSCSCCEEEEEEEEB
T ss_pred HHHHHHHhhcCCEEEEEEcCcCcccCCCCcEEEEEEECC
Confidence 345444 443333332221 1224567777763
No 272
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.43 E-value=0.00011 Score=65.67 Aligned_cols=146 Identities=16% Similarity=0.214 Sum_probs=84.8
Q ss_pred hhhhccc----CCCCCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCCCCHHHHHHc------Cc-----cc-eecc
Q 027609 59 SYLNGMG----INWSFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESPDTLPIIYER------GL-----FG-LYHD 121 (221)
Q Consensus 59 ~Y~~~L~----i~~~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~~~l~~a~eR------Gl-----~~-~~~d 121 (221)
.|.++|. ....+.++||=+|-|.|+.++.+++. ++..+.++.+|. ..++++++. |. .. .+.|
T Consensus 68 ~YhE~l~h~~l~~~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~-~Vv~~a~~~lp~~~~~~~~dpRv~v~~~D 146 (294)
T 3o4f_A 68 IYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDA-GVVSFCRQYLPNHNAGSYDDPRFKLVIDD 146 (294)
T ss_dssp HHHHHHHHHHHHHSSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCH-HHHHHHHHHCHHHHTTGGGCTTEEEEESC
T ss_pred HHHHHHHHHHHhhCCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCH-HHHHHHHhcCccccccccCCCcEEEEech
Confidence 4666654 23456899999999999999999887 454444555543 366666544 11 01 2334
Q ss_pred ccccCCCCCCccCeeeeccccccccc----cHHHHHHHhhhhccCCeEEEEEcCh-----hhHHHHHHHHHhcCCeEEEe
Q 027609 122 WCESFNTYPRTYDLLHADHLFSTIKK----SLKAVVAEVDRILRPDGNLILRDDA-----ETIVEVEDLVKSLHWDVRMI 192 (221)
Q Consensus 122 ~~e~f~~yp~sFDlVh~~~v~~h~~~----d~~~vL~EmdRVLRPGG~~ii~d~~-----~~~~~i~~i~~~l~W~~~~~ 192 (221)
..+-+..-+++||+|.... +..... --..++..+.|+|+|||.++..-.. +.+..+.+.+++.-=.+...
T Consensus 147 g~~~l~~~~~~yDvIi~D~-~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~~v~~~ 225 (294)
T 3o4f_A 147 GVNFVNQTSQTFDVIISDC-TDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFY 225 (294)
T ss_dssp TTTTTSCSSCCEEEEEESC-CCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHCSEEEEE
T ss_pred HHHHHhhccccCCEEEEeC-CCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhhCCceeee
Confidence 3322222349999998763 221110 1257889999999999999986322 22222322233332233222
Q ss_pred e------cCCCeeEEEEEec
Q 027609 193 Y------TNDNQGMLCVHKT 206 (221)
Q Consensus 193 ~------~~~~e~~l~~~K~ 206 (221)
. ..+.-.+.+|.|+
T Consensus 226 ~~~vPty~~g~w~f~~as~~ 245 (294)
T 3o4f_A 226 QAAIPTYYGGIMTFAWATDN 245 (294)
T ss_dssp EECCTTSSSSCEEEEEEESC
T ss_pred eeeeccCCCcceeheeEECC
Confidence 1 2345678888875
No 273
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.40 E-value=4.5e-05 Score=70.91 Aligned_cols=130 Identities=14% Similarity=0.033 Sum_probs=75.9
Q ss_pred CCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc------Cc--cceec-cccccCCCCC-CccCeeeec
Q 027609 71 VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER------GL--FGLYH-DWCESFNTYP-RTYDLLHAD 139 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR------Gl--~~~~~-d~~e~f~~yp-~sFDlVh~~ 139 (221)
..+|||+|||+|.++.+|+..+. .|+++|.+ .+++.+.++ |+ +.+++ |..+.+..++ ++||+|.++
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~---~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKAS---QGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCS---EEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCEEEEeCCCchHHHHHHHhcCC---EEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 68999999999999999998864 46888886 588877766 55 22333 3322112123 689999985
Q ss_pred cccc-------cccccHHHHHHHhhhhccC-CeEEEEEcChhhHHHHHHHHHhcCCeEEEee---c-CCCeeEEEEEe
Q 027609 140 HLFS-------TIKKSLKAVVAEVDRILRP-DGNLILRDDAETIVEVEDLVKSLHWDVRMIY---T-NDNQGMLCVHK 205 (221)
Q Consensus 140 ~v~~-------h~~~d~~~vL~EmdRVLRP-GG~~ii~d~~~~~~~i~~i~~~l~W~~~~~~---~-~~~e~~l~~~K 205 (221)
=-.. +..++...-+.++.++|+. +..+++.- .+.++ ++..++.+.|...++- . +=+|-+|++.+
T Consensus 171 PPrr~~~~grv~~led~~P~l~~~~~~l~~~~~~~~vK~-sP~ld-~~~~~~~l~~~~ev~~vSv~ge~kE~~l~~~~ 246 (410)
T 3ll7_A 171 PARRSGADKRVYAIADCEPDLIPLATELLPFCSSILAKL-SPMID-LWDTLQSLLHVQELHVVAAHGEVKELLVRMSL 246 (410)
T ss_dssp CEEC-----CCCCGGGEESCHHHHHHHHGGGSSEEEEEE-CTTSC-HHHHHHHCSSEEEEEEEEETTEEEEEEEEECT
T ss_pred CCCcCCCCceEEehhhcCCCHHHHHHHHHhhCCcEEEEc-CCCCC-hHHHHhhCCCCcEEEEEEeCCeEEEEEEEecC
Confidence 1111 1111334456666675554 44555543 33332 3444556677654432 1 12566666544
No 274
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.28 E-value=0.00018 Score=62.93 Aligned_cols=65 Identities=22% Similarity=0.247 Sum_probs=45.2
Q ss_pred eEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCc---cceec-cccccCCCCC--CccCeeeecccc
Q 027609 73 NVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGL---FGLYH-DWCESFNTYP--RTYDLLHADHLF 142 (221)
Q Consensus 73 ~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl---~~~~~-d~~e~f~~yp--~sFDlVh~~~v~ 142 (221)
+|||+|||+|.++..|++++. +|+++|.+ ++++.+.++-- +.+++ |. ..+ +++ ..||.|.++--+
T Consensus 49 ~VLEIG~G~G~lt~~L~~~~~---~V~avEid~~~~~~l~~~~~~~~v~vi~~D~-l~~-~~~~~~~~~~iv~NlPy 120 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEAGA---EVTAIEKDLRLRPVLEETLSGLPVRLVFQDA-LLY-PWEEVPQGSLLVANLPY 120 (271)
T ss_dssp CEEEECCTTSHHHHHHHHTTC---CEEEEESCGGGHHHHHHHTTTSSEEEEESCG-GGS-CGGGSCTTEEEEEEECS
T ss_pred eEEEEeCchHHHHHHHHHcCC---EEEEEECCHHHHHHHHHhcCCCCEEEEECCh-hhC-ChhhccCccEEEecCcc
Confidence 899999999999999999874 46888875 59998888721 12333 32 112 233 368888887433
No 275
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.24 E-value=0.00071 Score=58.67 Aligned_cols=82 Identities=20% Similarity=0.214 Sum_probs=50.1
Q ss_pred ccccccCCCCCC----ccCeeeeccccccccccH----HHHHHHhhhhccCCeEEEEEcChhhHHHHHHHHHhcCCeEEE
Q 027609 120 HDWCESFNTYPR----TYDLLHADHLFSTIKKSL----KAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVRM 191 (221)
Q Consensus 120 ~d~~e~f~~yp~----sFDlVh~~~v~~h~~~d~----~~vL~EmdRVLRPGG~~ii~d~~~~~~~i~~i~~~l~W~~~~ 191 (221)
+|..+.++..+. .||+|... .|+.-. +| ..+|.+|.|+|||||.++.-.... .+.+-+..-..++..
T Consensus 157 GDa~~~l~~~~~~~~~~~D~iflD-~fsp~~-~p~lw~~~~l~~l~~~L~pGG~l~tysaa~---~vrr~L~~aGF~v~~ 231 (257)
T 2qy6_A 157 GDINELISQLDDSLNQKVDAWFLD-GFAPAK-NPDMWTQNLFNAMARLARPGGTLATFTSAG---FVRRGLQEAGFTMQK 231 (257)
T ss_dssp SCHHHHGGGSCGGGTTCEEEEEEC-SSCTTT-CGGGCCHHHHHHHHHHEEEEEEEEESCCBH---HHHHHHHHHTEEEEE
T ss_pred CcHHHHHhhcccccCCeEEEEEEC-CCCccc-ChhhcCHHHHHHHHHHcCCCcEEEEEeCCH---HHHHHHHHCCCEEEe
Confidence 454444444443 79999985 344211 21 579999999999999998643332 344445555666543
Q ss_pred ee-cCCCeeEEEEEec
Q 027609 192 IY-TNDNQGMLCVHKT 206 (221)
Q Consensus 192 ~~-~~~~e~~l~~~K~ 206 (221)
.. ...+..++.+.|+
T Consensus 232 ~~g~~~kr~m~~a~~~ 247 (257)
T 2qy6_A 232 RKGFGRKREMLCGVME 247 (257)
T ss_dssp ECCSTTCCCEEEEEEC
T ss_pred CCCCCCCCceEEEEec
Confidence 22 2235568888774
No 276
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.23 E-value=8.4e-05 Score=64.80 Aligned_cols=94 Identities=21% Similarity=0.229 Sum_probs=56.2
Q ss_pred CCCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCC-C-------HHHHHHc----C-c---cceecccccc-CCC
Q 027609 66 INWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPD-T-------LPIIYER----G-L---FGLYHDWCES-FNT 128 (221)
Q Consensus 66 i~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~-~-------l~~a~eR----G-l---~~~~~d~~e~-f~~ 128 (221)
+..+...+|||++||+|.++..|+.++.. |+.+|.+. + ++.+.++ | + +.+++.-++. +..
T Consensus 84 l~~g~~~~VLDl~~G~G~dal~lA~~g~~---V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~ 160 (258)
T 2oyr_A 84 IKGDYLPDVVDATAGLGRDAFVLASVGCR---VRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD 160 (258)
T ss_dssp CBTTBCCCEEETTCTTCHHHHHHHHHTCC---EEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTT
T ss_pred ccCCCCCEEEEcCCcCCHHHHHHHHcCCE---EEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHh
Confidence 44433379999999999999999988754 57777653 3 2222111 1 1 2233322222 333
Q ss_pred CCCccCeeeeccccccccccHHHHHHHhhhhccCCe
Q 027609 129 YPRTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDG 164 (221)
Q Consensus 129 yp~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG 164 (221)
++.+||+|.++-.|.+-. ...++.+.-|+||+.+
T Consensus 161 ~~~~fDvV~lDP~y~~~~--~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 161 ITPRPQVVYLDPMFPHKQ--KSALVKKEMRVFQSLV 194 (258)
T ss_dssp CSSCCSEEEECCCCCCCC--C-----HHHHHHHHHS
T ss_pred CcccCCEEEEcCCCCCcc--cchHHHHHHHHHHHhh
Confidence 556799999997775432 2356777778998877
No 277
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.22 E-value=0.0015 Score=65.81 Aligned_cols=106 Identities=8% Similarity=-0.031 Sum_probs=66.1
Q ss_pred CCCeEEeecCcchHHHHHHhhCC--CeEEEeccCCCC-CCHHHHHH----------cCccc--eeccccccCCCCC-Ccc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESP-DTLPIIYE----------RGLFG--LYHDWCESFNTYP-RTY 133 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~--v~vmnv~~~d~~-~~l~~a~e----------RGl~~--~~~d~~e~f~~yp-~sF 133 (221)
...+|||.+||+|+|+.+++++- ....++.++|.. .++++|.. +|+.. +.++-.......+ ..|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 36789999999999999988752 111246788875 47777722 22211 2222111111234 889
Q ss_pred Ceeeecccccc-cc--c-------------------------cHHHHHHHhhhhccCCeEEEEEcChhhH
Q 027609 134 DLLHADHLFST-IK--K-------------------------SLKAVVAEVDRILRPDGNLILRDDAETI 175 (221)
Q Consensus 134 DlVh~~~v~~h-~~--~-------------------------d~~~vL~EmdRVLRPGG~~ii~d~~~~~ 175 (221)
|+|.|+==+.. .. . -...++..+.+.|||||.+++--++.++
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~L 470 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYL 470 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHH
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHh
Confidence 99999743321 00 0 0234677899999999999888776665
No 278
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.07 E-value=0.0018 Score=55.59 Aligned_cols=43 Identities=12% Similarity=0.071 Sum_probs=35.6
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER 113 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR 113 (221)
....+|||+|||+|.++..|++++.. +++++|.+ ++++.+.++
T Consensus 30 ~~~~~VLDiG~G~G~lt~~L~~~~~~--~v~avEid~~~~~~~~~~ 73 (249)
T 3ftd_A 30 EEGNTVVEVGGGTGNLTKVLLQHPLK--KLYVIELDREMVENLKSI 73 (249)
T ss_dssp CTTCEEEEEESCHHHHHHHHTTSCCS--EEEEECCCHHHHHHHTTS
T ss_pred CCcCEEEEEcCchHHHHHHHHHcCCC--eEEEEECCHHHHHHHHhc
Confidence 34678999999999999999998522 57888886 589988887
No 279
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.01 E-value=0.00059 Score=60.35 Aligned_cols=125 Identities=14% Similarity=0.068 Sum_probs=67.6
Q ss_pred CCeEEeecCcchHHHHHHhhC-CCe--EEEeccCCCC--CCHHHHHHcC--cccee-c-cccccCCCCCCccCeeeeccc
Q 027609 71 VRNVMDMRAVYGGFAAALKDL-KVW--VMNVVPIESP--DTLPIIYERG--LFGLY-H-DWCESFNTYPRTYDLLHADHL 141 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~-~v~--vmnv~~~d~~--~~l~~a~eRG--l~~~~-~-d~~e~f~~yp~sFDlVh~~~v 141 (221)
..+|+|+||++|+++...+++ ++- ..-++++|.+ .+..+- .| ++.+. . |..+ + -+..||+|.|...
T Consensus 74 g~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~--~Gv~~i~~~~G~Df~~-~--~~~~~DvVLSDMA 148 (269)
T 2px2_A 74 IGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQS--YGWNIVTMKSGVDVFY-K--PSEISDTLLCDIG 148 (269)
T ss_dssp CEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCS--TTGGGEEEECSCCGGG-S--CCCCCSEEEECCC
T ss_pred CCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccC--CCceEEEeeccCCccC-C--CCCCCCEEEeCCC
Confidence 789999999999999999886 331 1234566631 121100 12 22222 2 4322 1 1478999999853
Q ss_pred cc-------cccccHHHHHHHhhhhccCCe-EEEEEcC----hhhH---HHHHHHHHhcCCeEEEee--cCCCeeEEEEE
Q 027609 142 FS-------TIKKSLKAVVAEVDRILRPDG-NLILRDD----AETI---VEVEDLVKSLHWDVRMIY--TNDNQGMLCVH 204 (221)
Q Consensus 142 ~~-------h~~~d~~~vL~EmdRVLRPGG-~~ii~d~----~~~~---~~i~~i~~~l~W~~~~~~--~~~~e~~l~~~ 204 (221)
=. |.. ... +|.=+.++|+||| .|++--- .++. +.++..+.+.. +..+- .++.|-+++|.
T Consensus 149 PnSG~~~vD~~R-s~~-aL~~A~~~Lk~gG~~FvvKVFqg~~~~~~~~l~~lk~~F~~vk--vk~paSR~~S~E~YlVa~ 224 (269)
T 2px2_A 149 ESSPSAEIEEQR-TLR-ILEMVSDWLSRGPKEFCIKILCPYMPKVIEKLESLQRRFGGGL--VRVPLSRNSNHEMYWVSG 224 (269)
T ss_dssp CCCSCHHHHHHH-HHH-HHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHHCCEE--ECCTTSCTTCCCEEEETT
T ss_pred CCCCccHHHHHH-HHH-HHHHHHHHhhcCCcEEEEEECCCCchHHHHHHHHHHHHcCCEE--EECCCCCCCCccEEEEec
Confidence 32 111 122 4433349999999 8888732 3333 34444444433 11111 23467777764
No 280
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.01 E-value=0.00073 Score=66.32 Aligned_cols=110 Identities=15% Similarity=0.200 Sum_probs=64.7
Q ss_pred CCCCCCeEEeecCcchHHHHHHhhCC------C---------e--------------------------EEEeccCCCC-
Q 027609 67 NWSFVRNVMDMRAVYGGFAAALKDLK------V---------W--------------------------VMNVVPIESP- 104 (221)
Q Consensus 67 ~~~~~r~VLD~GcG~G~faa~L~~~~------v---------~--------------------------vmnv~~~d~~- 104 (221)
.+.....|||.+||+|+|+...+... . | -..+.++|.+
T Consensus 187 ~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~ 266 (703)
T 3v97_A 187 GWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDA 266 (703)
T ss_dssp TCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCH
T ss_pred CCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCH
Confidence 45557889999999999975544321 0 0 0246788886
Q ss_pred CCHHHHHHc----Cccc---e-eccccccCCCCC-CccCeeeecccccc-cc--ccHHHH---HHHhhhhccCCeEEEEE
Q 027609 105 DTLPIIYER----GLFG---L-YHDWCESFNTYP-RTYDLLHADHLFST-IK--KSLKAV---VAEVDRILRPDGNLILR 169 (221)
Q Consensus 105 ~~l~~a~eR----Gl~~---~-~~d~~e~f~~yp-~sFDlVh~~~v~~h-~~--~d~~~v---L~EmdRVLRPGG~~ii~ 169 (221)
.+++.|.+. |+.+ + ..|..+-..+++ ++||+|.|+==+.. +. .+...+ |.|+-|.+.|||.+++-
T Consensus 267 ~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~il 346 (703)
T 3v97_A 267 RVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLF 346 (703)
T ss_dssp HHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEE
Confidence 588777654 5533 2 234332112343 49999999833221 11 133344 44555555689999888
Q ss_pred cChhhHH
Q 027609 170 DDAETIV 176 (221)
Q Consensus 170 d~~~~~~ 176 (221)
..++.+.
T Consensus 347 t~~~~l~ 353 (703)
T 3v97_A 347 SASPDLL 353 (703)
T ss_dssp ESCHHHH
T ss_pred eCCHHHH
Confidence 7775544
No 281
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=96.89 E-value=0.00093 Score=63.82 Aligned_cols=134 Identities=17% Similarity=0.132 Sum_probs=77.6
Q ss_pred eEEeecCcchHHHHHHhhC----C--C--------eEEEeccCCCC-CCHHHHHHc----Cccceec-cccccC--CCCC
Q 027609 73 NVMDMRAVYGGFAAALKDL----K--V--------WVMNVVPIESP-DTLPIIYER----GLFGLYH-DWCESF--NTYP 130 (221)
Q Consensus 73 ~VLD~GcG~G~faa~L~~~----~--v--------~vmnv~~~d~~-~~l~~a~eR----Gl~~~~~-d~~e~f--~~yp 130 (221)
+|||.+||+|+|...+.++ . . ...++.++|.. .++.+|..+ |+...++ -.+..| +.++
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~~ 326 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQHP 326 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSCT
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcccc
Confidence 8999999999998776432 0 0 02478899885 477776643 4322110 001122 2245
Q ss_pred -CccCeeeecccccc--c-----------------------cc---cHHHHHHHhhhhccCCeEEEEEcChhh-------
Q 027609 131 -RTYDLLHADHLFST--I-----------------------KK---SLKAVVAEVDRILRPDGNLILRDDAET------- 174 (221)
Q Consensus 131 -~sFDlVh~~~v~~h--~-----------------------~~---d~~~vL~EmdRVLRPGG~~ii~d~~~~------- 174 (221)
..||+|.|+==|.. | +. .--.+|..+.+.|||||.+++--++.+
T Consensus 327 ~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~~~~ 406 (544)
T 3khk_A 327 DLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSNTNN 406 (544)
T ss_dssp TCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHHHHCCGGG
T ss_pred cccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecchhhhcCcch
Confidence 89999999744431 1 11 112688999999999999877655433
Q ss_pred HHHHHHHHHhcCC-eEEEee-------cCCCeeEEEEEec
Q 027609 175 IVEVEDLVKSLHW-DVRMIY-------TNDNQGMLCVHKT 206 (221)
Q Consensus 175 ~~~i~~i~~~l~W-~~~~~~-------~~~~e~~l~~~K~ 206 (221)
..++.+.+-.-++ .+.+.. +.-.--||+.+|.
T Consensus 407 ~~~iRk~Lle~~~l~aII~LP~~lF~~t~i~t~Ilvl~K~ 446 (544)
T 3khk_A 407 EGEIRKTLVEQDLVECMVALPGQLFTNTQIPACIWFLTKD 446 (544)
T ss_dssp HHHHHHHHHHTTCEEEEEECCTTBCCSCSSCEEEEEEESC
T ss_pred HHHHHHHHHhCCcHhEEEECCCCCCCCCCCCeEEEEEecC
Confidence 3456555444444 333321 1124456666664
No 282
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.87 E-value=0.00039 Score=60.17 Aligned_cols=42 Identities=12% Similarity=0.158 Sum_probs=35.1
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER 113 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR 113 (221)
....+|||+|||+|.++..|++++. .|+++|.+ ++++.+.++
T Consensus 28 ~~~~~VLEIG~G~G~lt~~La~~~~---~V~avEid~~~~~~~~~~ 70 (255)
T 3tqs_A 28 QKTDTLVEIGPGRGALTDYLLTECD---NLALVEIDRDLVAFLQKK 70 (255)
T ss_dssp CTTCEEEEECCTTTTTHHHHTTTSS---EEEEEECCHHHHHHHHHH
T ss_pred CCcCEEEEEcccccHHHHHHHHhCC---EEEEEECCHHHHHHHHHH
Confidence 3467999999999999999999863 56888886 588888776
No 283
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=96.85 E-value=0.00068 Score=67.28 Aligned_cols=127 Identities=12% Similarity=-0.014 Sum_probs=69.6
Q ss_pred CCcccchhhhhhhHHHHHhhhhhccc-CC-CCCCCeEEeecCcchHHHH----HH--hh------CCCeEEEeccCCCCC
Q 027609 40 AAPEDFTADYQHWKNVVSKSYLNGMG-IN-WSFVRNVMDMRAVYGGFAA----AL--KD------LKVWVMNVVPIESPD 105 (221)
Q Consensus 40 ~~~~~f~~d~~~W~~~v~~~Y~~~L~-i~-~~~~r~VLD~GcG~G~faa----~L--~~------~~v~vmnv~~~d~~~ 105 (221)
.++|.|..|.-.-..--+..+...-. .. ..+...|||+|||+|-+.. +. ++ +......|.+++.+.
T Consensus 377 ~tYe~fekD~vRy~~Y~~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp 456 (745)
T 3ua3_A 377 GVYNTFEQDQIKYDVYGEAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNP 456 (745)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCH
T ss_pred HHHHHHcCChhhHHHHHHHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCCh
Confidence 35888998876543322211221111 11 1235679999999999842 11 12 011123567777652
Q ss_pred ----CHHHHHHcCc---cceeccccccCCCC------CCccCeeeeccccccc-cccHHHHHHHhhhhccCCeEEE
Q 027609 106 ----TLPIIYERGL---FGLYHDWCESFNTY------PRTYDLLHADHLFSTI-KKSLKAVVAEVDRILRPDGNLI 167 (221)
Q Consensus 106 ----~l~~a~eRGl---~~~~~d~~e~f~~y------p~sFDlVh~~~v~~h~-~~d~~~vL~EmdRVLRPGG~~i 167 (221)
+++.....|+ +-+++.-++.+. . |...|+|.+--+=.-. .+-....|.-++|.|||||.+|
T Consensus 457 ~A~~~l~~~~~Ng~~d~VtVI~gd~eev~-lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 457 NAIVTLKYMNVRTWKRRVTIIESDMRSLP-GIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHHHHHHHHHTTTTCSEEEESCGGGHH-HHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred HHHHHHHHHHhcCCCCeEEEEeCchhhcc-cccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 3343344555 334453344332 3 6889999987332111 1123457888899999999876
No 284
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.78 E-value=0.0044 Score=54.73 Aligned_cols=69 Identities=16% Similarity=0.147 Sum_probs=49.4
Q ss_pred cccccCCCCC-CccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEEcCh---hhHHHHHHHHHhcCCeEEEe
Q 027609 121 DWCESFNTYP-RTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA---ETIVEVEDLVKSLHWDVRMI 192 (221)
Q Consensus 121 d~~e~f~~yp-~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~---~~~~~i~~i~~~l~W~~~~~ 192 (221)
+..+.++.++ .+||+||...- ++. .-...|..+.+.|+|||++++.|-. .....+.++.+...++..+.
T Consensus 197 da~etL~~~~~~~~d~vfIDaD--~y~-~~~~~Le~~~p~L~pGGiIv~DD~~~~~G~~~Av~Ef~~~~~i~~~i~ 269 (282)
T 2wk1_A 197 WFKDTLPTAPIDTLAVLRMDGD--LYE-STWDTLTNLYPKVSVGGYVIVDDYMMCPPCKDAVDEYRAKFDIADELI 269 (282)
T ss_dssp CHHHHSTTCCCCCEEEEEECCC--SHH-HHHHHHHHHGGGEEEEEEEEESSCTTCHHHHHHHHHHHHHTTCCSCCE
T ss_pred CHHHHHhhCCCCCEEEEEEcCC--ccc-cHHHHHHHHHhhcCCCEEEEEcCCCCCHHHHHHHHHHHHhcCCceEEE
Confidence 4444566676 89999998852 344 3457888899999999999998853 24556677777777776543
No 285
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.77 E-value=0.0016 Score=58.98 Aligned_cols=130 Identities=13% Similarity=0.202 Sum_probs=70.5
Q ss_pred CCCCCCCeEEeecC------cchHHHHH-HhhCCCeEEEeccCCCCCCHHHHHHcCccceeccccccCCCCC-CccCeee
Q 027609 66 INWSFVRNVMDMRA------VYGGFAAA-LKDLKVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYP-RTYDLLH 137 (221)
Q Consensus 66 i~~~~~r~VLD~Gc------G~G~faa~-L~~~~v~vmnv~~~d~~~~l~~a~eRGl~~~~~d~~e~f~~yp-~sFDlVh 137 (221)
+.--...+|||+|| .+|++... +...+.. |+.+|..++.. ..... +..| |..+ +. +.||+|.
T Consensus 105 ~~vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~---VVavDL~~~~s---da~~~-IqGD-~~~~--~~~~k~DLVI 174 (344)
T 3r24_A 105 LAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTL---LVDSDLNDFVS---DADST-LIGD-CATV--HTANKWDLII 174 (344)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCE---EEEEESSCCBC---SSSEE-EESC-GGGE--EESSCEEEEE
T ss_pred EeecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcE---EEEeeCccccc---CCCeE-EEcc-cccc--ccCCCCCEEE
Confidence 44445899999996 89996444 3233333 35555543322 11111 4455 3322 23 8899998
Q ss_pred eccccc---ccc-----c-cHHHHHHHhh-hhccCCeEEEEEcChhh-HHHHHHHHHhcCCeEEEee---cCCCeeEEEE
Q 027609 138 ADHLFS---TIK-----K-SLKAVVAEVD-RILRPDGNLILRDDAET-IVEVEDLVKSLHWDVRMIY---TNDNQGMLCV 203 (221)
Q Consensus 138 ~~~v~~---h~~-----~-d~~~vL~Emd-RVLRPGG~~ii~d~~~~-~~~i~~i~~~l~W~~~~~~---~~~~e~~l~~ 203 (221)
+...=. +.. . .......|+. ++|+|||.|++--...- -+.+.++.+...+-..... .++.|.+|++
T Consensus 175 SDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~~~L~~lrk~F~~VK~fK~ASRa~SsEvYLVG 254 (344)
T 3r24_A 175 SDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFVTNVNASSSEAFLIG 254 (344)
T ss_dssp ECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEEEGGGTTSSCEEEEE
T ss_pred ecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCHHHHHHHHhhCCeEEEECCCCCCCCeeEEEEe
Confidence 764321 100 1 3555556654 58999999999832211 1234444443332222222 3468999999
Q ss_pred Ee
Q 027609 204 HK 205 (221)
Q Consensus 204 ~K 205 (221)
+.
T Consensus 255 ~g 256 (344)
T 3r24_A 255 AN 256 (344)
T ss_dssp EE
T ss_pred ee
Confidence 76
No 286
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.61 E-value=0.0055 Score=56.52 Aligned_cols=146 Identities=17% Similarity=0.203 Sum_probs=81.5
Q ss_pred hhhhccc---CCCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHcCccc---------------e-e
Q 027609 59 SYLNGMG---INWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYERGLFG---------------L-Y 119 (221)
Q Consensus 59 ~Y~~~L~---i~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eRGl~~---------------~-~ 119 (221)
.|.++|- +...+.++||=+|.|.|+.++++++.+...+.++.+|. ..++++++- ++. + +
T Consensus 191 ~Y~e~l~h~~l~~~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp-~VVe~ar~y-fp~~~~~~~d~pr~~rv~vii 268 (381)
T 3c6k_A 191 AYTRAIMGSGKEDYTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQ-MVIDGCKKY-MRKTCGDVLDNLKGDCYQVLI 268 (381)
T ss_dssp HHHHHHTTTTCCCCTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCH-HHHHHHHHH-CCC----CCSSSEETTEEEEE
T ss_pred HHHHHHHHHHhhcCCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCH-HHHHHHHhh-chhhhhhhhccccccceeeeh
Confidence 3555443 22334689999999999999999988764434444442 377777664 211 1 1
Q ss_pred ccccccCCCC---CCccCeeeeccccccccc-c---------HHHHHHHhhhhccCCeEEEEEcC----hhhHHHHHHHH
Q 027609 120 HDWCESFNTY---PRTYDLLHADHLFSTIKK-S---------LKAVVAEVDRILRPDGNLILRDD----AETIVEVEDLV 182 (221)
Q Consensus 120 ~d~~e~f~~y---p~sFDlVh~~~v~~h~~~-d---------~~~vL~EmdRVLRPGG~~ii~d~----~~~~~~i~~i~ 182 (221)
.|..+-+..+ .+.||+|... ++..... + -..++..+.|+|+|||.++..-. .+....+.+.+
T Consensus 269 ~Da~~fl~~~~~~~~~yDvIIvD-l~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~tl 347 (381)
T 3c6k_A 269 EDCIPVLKRYAKEGREFDYVIND-LTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQL 347 (381)
T ss_dssp SCHHHHHHHHHHHTCCEEEEEEE-CCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhccCceeEEEEC-CCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHHHH
Confidence 1211000001 1579999976 3321110 1 24667889999999999997532 22334455555
Q ss_pred HhcCCeEEEe--e----c-CCCeeEEEEEecc
Q 027609 183 KSLHWDVRMI--Y----T-NDNQGMLCVHKTY 207 (221)
Q Consensus 183 ~~l~W~~~~~--~----~-~~~e~~l~~~K~~ 207 (221)
+++--.+... . + .+.=.+.+|.|++
T Consensus 348 ~~vF~~v~~~~~~~~VPSy~~~W~F~~aSK~~ 379 (381)
T 3c6k_A 348 GRLYCPVEFSKEIVCVPSYLELWVFYTVWKKA 379 (381)
T ss_dssp TTSSSCEEEEEEEECCGGGSSCEEEEEEEECC
T ss_pred HHhCCcceEeeEEEEecCCCCceeeeEEECCC
Confidence 5553333211 0 1 1234667777754
No 287
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=96.61 E-value=0.012 Score=56.16 Aligned_cols=117 Identities=11% Similarity=0.007 Sum_probs=70.8
Q ss_pred CCCCeEEeecCcchHHHHHHhhCC--CeEEEeccCCCC-CCHHHHHH----cCcc----ceeccccccCC----CCC-Cc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESP-DTLPIIYE----RGLF----GLYHDWCESFN----TYP-RT 132 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~--v~vmnv~~~d~~-~~l~~a~e----RGl~----~~~~d~~e~f~----~yp-~s 132 (221)
....+|||.+||+|+|...+.++= ....++.++|.. .+..+|.. +|+. .+.+ +..|. .++ ..
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~--gDtL~~d~p~~~~~~ 297 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHN--ADTLDEDWPTQEPTN 297 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEE--SCTTTSCSCCSSCCC
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEe--cceeccccccccccc
Confidence 357799999999999987765540 012257788875 46666654 4542 1222 11222 244 78
Q ss_pred cCeeeeccccc-cc------------------cc---cHHHHHHHhhhhcc-CCeEEEEEcChhhH------HHHHHHHH
Q 027609 133 YDLLHADHLFS-TI------------------KK---SLKAVVAEVDRILR-PDGNLILRDDAETI------VEVEDLVK 183 (221)
Q Consensus 133 FDlVh~~~v~~-h~------------------~~---d~~~vL~EmdRVLR-PGG~~ii~d~~~~~------~~i~~i~~ 183 (221)
||+|.++==|. .+ +. .--.++..+.+.|+ |||.+++--++.++ .++.+.+-
T Consensus 298 fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~Ll 377 (542)
T 3lkd_A 298 FDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKALL 377 (542)
T ss_dssp BSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHHHH
T ss_pred ccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHHHH
Confidence 99999872221 01 00 11248999999999 99999777665543 44655544
Q ss_pred hcCC
Q 027609 184 SLHW 187 (221)
Q Consensus 184 ~l~W 187 (221)
.-++
T Consensus 378 e~~~ 381 (542)
T 3lkd_A 378 EEGA 381 (542)
T ss_dssp HTTC
T ss_pred hCCc
Confidence 3344
No 288
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=96.53 E-value=0.00054 Score=60.04 Aligned_cols=44 Identities=9% Similarity=0.062 Sum_probs=34.4
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCe-EEEeccCCCC-CCHHHHHHc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVW-VMNVVPIESP-DTLPIIYER 113 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~-vmnv~~~d~~-~~l~~a~eR 113 (221)
...+|||+|||+|.++..|++++.. -.+|+++|.+ ++++.+.++
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~ 87 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQR 87 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHH
T ss_pred CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHh
Confidence 4679999999999999999987432 0126788876 599988887
No 289
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=96.52 E-value=0.0017 Score=54.86 Aligned_cols=34 Identities=18% Similarity=0.173 Sum_probs=25.5
Q ss_pred CccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEEc
Q 027609 131 RTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 131 ~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
++||+|....-+ ....+.+.-+.|||||.+++.+
T Consensus 121 ~~fDlIfIDg~k------~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 121 RHPDVVLVDGRF------RVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp CCCSEEEECSSS------HHHHHHHHHHHCSSCEEEEETT
T ss_pred CCCCEEEEeCCC------chhHHHHHHHhcCCCeEEEEeC
Confidence 789999987532 2355555669999999997765
No 290
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=96.41 E-value=0.0007 Score=60.07 Aligned_cols=43 Identities=19% Similarity=0.221 Sum_probs=34.5
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER 113 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR 113 (221)
...+|||+|||+|+++.+|+++.- ...|+++|.+ ++++.+.++
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~ 69 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEK 69 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHH
Confidence 467999999999999999988721 1257899986 599988876
No 291
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.19 E-value=0.0039 Score=56.81 Aligned_cols=104 Identities=17% Similarity=0.123 Sum_probs=63.1
Q ss_pred CCCCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCC-CHH---HHHHc-Ccc------c---eeccccccCCCC-C
Q 027609 66 INWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPD-TLP---IIYER-GLF------G---LYHDWCESFNTY-P 130 (221)
Q Consensus 66 i~~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~-~l~---~a~eR-Gl~------~---~~~d~~e~f~~y-p 130 (221)
++.....+||||-||+||=+.+|++.+-. ..|+..|.+. -++ -..+| |.. . ..+| +..+..+ +
T Consensus 144 L~~~pg~~VLD~CAaPGGKT~~la~~~~~-~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D-~~~~~~~~~ 221 (359)
T 4fzv_A 144 LGLQPGDIVLDLCAAPGGKTLALLQTGCC-RNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWD-GRKWGELEG 221 (359)
T ss_dssp HCCCTTEEEEESSCTTCHHHHHHHHTTCE-EEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCC-GGGHHHHST
T ss_pred hCCCCCCEEEEecCCccHHHHHHHHhcCC-CcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCc-hhhcchhcc
Confidence 44555789999999999999999887532 3577888752 222 22222 221 1 1223 1222223 4
Q ss_pred CccCeeeec----cc----cc-------cccc--------cHHHHHHHhhhhccCCeEEEEEcC
Q 027609 131 RTYDLLHAD----HL----FS-------TIKK--------SLKAVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 131 ~sFDlVh~~----~v----~~-------h~~~--------d~~~vL~EmdRVLRPGG~~ii~d~ 171 (221)
++||.|.+. .. +. .+.. --..+|...-+.|||||.+|.+++
T Consensus 222 ~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTC 285 (359)
T 4fzv_A 222 DTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTC 285 (359)
T ss_dssp TCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred ccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Confidence 899999843 21 11 1110 113567778899999999999965
No 292
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=95.88 E-value=0.0027 Score=54.69 Aligned_cols=41 Identities=7% Similarity=0.014 Sum_probs=31.3
Q ss_pred CCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc
Q 027609 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER 113 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR 113 (221)
...+|||+|||+|.++. |.. +.. ..|+++|.+ ++++.+.++
T Consensus 21 ~~~~VLEIG~G~G~lt~-l~~-~~~-~~v~avEid~~~~~~a~~~ 62 (252)
T 1qyr_A 21 KGQAMVEIGPGLAALTE-PVG-ERL-DQLTVIELDRDLAARLQTH 62 (252)
T ss_dssp TTCCEEEECCTTTTTHH-HHH-TTC-SCEEEECCCHHHHHHHHTC
T ss_pred CcCEEEEECCCCcHHHH-hhh-CCC-CeEEEEECCHHHHHHHHHH
Confidence 46789999999999999 754 322 026888886 599988887
No 293
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=95.47 E-value=0.037 Score=49.93 Aligned_cols=96 Identities=16% Similarity=0.069 Sum_probs=53.1
Q ss_pred CCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-------CCHHHHHHcCccceec--cccccCCCCCCccCeeeecc
Q 027609 71 VRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-------DTLPIIYERGLFGLYH--DWCESFNTYPRTYDLLHADH 140 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-------~~l~~a~eRGl~~~~~--d~~e~f~~yp~sFDlVh~~~ 140 (221)
..+|||+||++|+|+.+.+.. ++. .|.++|.- .+.+-.--. ++-... |. ..++ |..+|+|.|+-
T Consensus 95 ~~~VlDLGaapGGwsq~~~~~~gv~--~V~avdvG~~~he~P~~~~ql~w~-lV~~~~~~Dv-~~l~--~~~~D~ivcDi 168 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYMATQKRVQ--EVRGYTKGGPGHEEPQLVQSYGWN-IVTMKSGVDV-FYRP--SECCDTLLCDI 168 (321)
T ss_dssp CEEEEEETCTTCHHHHHHTTCTTEE--EEEEECCCSTTSCCCCCCCBTTGG-GEEEECSCCT-TSSC--CCCCSEEEECC
T ss_pred CCEEEEeCCCCCcHHHHHHhhcCCC--EEEEEEcCCCCccCcchhhhcCCc-ceEEEeccCH-hhCC--CCCCCEEEEEC
Confidence 449999999999999966655 543 56666651 111100001 111111 11 1122 36699999985
Q ss_pred ccccccc---cHHH---HHHHhhhhccCC-eEEEEEcChh
Q 027609 141 LFSTIKK---SLKA---VVAEVDRILRPD-GNLILRDDAE 173 (221)
Q Consensus 141 v~~h~~~---d~~~---vL~EmdRVLRPG-G~~ii~d~~~ 173 (221)
--+ -+. +-+. +|.=+.+.|++| |-|++---.+
T Consensus 169 geS-s~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 169 GES-SSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp CCC-CSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred ccC-CCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 422 110 1112 343346788999 9999985444
No 294
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.45 E-value=0.0078 Score=66.59 Aligned_cols=99 Identities=16% Similarity=0.137 Sum_probs=41.3
Q ss_pred CCeEEeecCcchHHHHHHhh----CCCeEEEeccCCCC-CCHHHHHHcCcc--ceec---cccccCCCC-CCccCeeeec
Q 027609 71 VRNVMDMRAVYGGFAAALKD----LKVWVMNVVPIESP-DTLPIIYERGLF--GLYH---DWCESFNTY-PRTYDLLHAD 139 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~----~~v~vmnv~~~d~~-~~l~~a~eRGl~--~~~~---d~~e~f~~y-p~sFDlVh~~ 139 (221)
..+||.+|+|+|+.+..+.+ .+....+.+-.|.+ ...+.+.++ +- .+-. |..+ ..+| +.+||+|.++
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~-f~~~di~~~~~d~~~-~~~~~~~~ydlvia~ 1318 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAK-LEQLHVTQGQWDPAN-PAPGSLGKADLLVCN 1318 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTT-HHHHTEEEECCCSSC-CCC-----CCEEEEE
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHH-hhhcccccccccccc-cccCCCCceeEEEEc
Confidence 56899999999986554322 12112244444543 233333333 11 1111 1101 1123 4889999999
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEEcCh
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
.+++-.. +....|..+.++|||||++++.+..
T Consensus 1319 ~vl~~t~-~~~~~l~~~~~lL~p~G~l~~~e~~ 1350 (2512)
T 2vz8_A 1319 CALATLG-DPAVAVGNMAATLKEGGFLLLHTLL 1350 (2512)
T ss_dssp CC---------------------CCEEEEEEC-
T ss_pred ccccccc-cHHHHHHHHHHhcCCCcEEEEEecc
Confidence 9997555 8899999999999999999998643
No 295
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.34 E-value=0.027 Score=48.94 Aligned_cols=70 Identities=21% Similarity=0.300 Sum_probs=42.7
Q ss_pred ccccccCCCCC-CccCeeeeccccc---cc----------------cccHHHHHHHhhhhccCCeEEEEEcCh-------
Q 027609 120 HDWCESFNTYP-RTYDLLHADHLFS---TI----------------KKSLKAVVAEVDRILRPDGNLILRDDA------- 172 (221)
Q Consensus 120 ~d~~e~f~~yp-~sFDlVh~~~v~~---h~----------------~~d~~~vL~EmdRVLRPGG~~ii~d~~------- 172 (221)
.|+.+.+..++ ++||+|.++==+. .+ ......++.|+.|+|||||.+++.-..
T Consensus 27 gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~~~~~~~ 106 (297)
T 2zig_A 27 GDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDVAVARRR 106 (297)
T ss_dssp SCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEEEECC-
T ss_pred CcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCCcccccc
Confidence 34444344456 7888888762221 11 113456889999999999999776321
Q ss_pred -------hhHHHHHHHHHhcCCeE
Q 027609 173 -------ETIVEVEDLVKSLHWDV 189 (221)
Q Consensus 173 -------~~~~~i~~i~~~l~W~~ 189 (221)
+....+..+++...|..
T Consensus 107 ~g~~~~~~~~~~l~~~~~~~Gf~~ 130 (297)
T 2zig_A 107 FGRHLVFPLHADIQVRCRKLGFDN 130 (297)
T ss_dssp ---EEEECHHHHHHHHHHHTTCEE
T ss_pred CCcccccccHHHHHHHHHHcCCee
Confidence 12345666777777654
No 296
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=95.26 E-value=0.017 Score=47.12 Aligned_cols=90 Identities=12% Similarity=0.070 Sum_probs=54.5
Q ss_pred hhhhhhhHHHHHhhhhhcccCCCCCCCeEEeecCcch-HHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceeccc
Q 027609 46 TADYQHWKNVVSKSYLNGMGINWSFVRNVMDMRAVYG-GFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYHDW 122 (221)
Q Consensus 46 ~~d~~~W~~~v~~~Y~~~L~i~~~~~r~VLD~GcG~G-~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~d~ 122 (221)
...++.|...+. |...- ... ..+|||+|||+| ..|..|++ .++ +|+.+|.+ ..++ .+..|
T Consensus 16 ~~~~~m~e~Lae--YI~~~-~~~--~~rVlEVG~G~g~~vA~~La~~~g~---~V~atDInp~Av~--------~v~dD- 78 (153)
T 2k4m_A 16 PRGSHMWNDLAV--YIIRC-SGP--GTRVVEVGAGRFLYVSDYIRKHSKV---DLVLTDIKPSHGG--------IVRDD- 78 (153)
T ss_dssp CCCCHHHHHHHH--HHHHH-SCS--SSEEEEETCTTCCHHHHHHHHHSCC---EEEEECSSCSSTT--------EECCC-
T ss_pred cchhhHHHHHHH--HHHhc-CCC--CCcEEEEccCCChHHHHHHHHhCCC---eEEEEECCccccc--------eEEcc-
Confidence 344566877773 54211 112 458999999999 69999997 775 45777764 3444 12233
Q ss_pred cccCCCCC---CccCeeeeccccccccccHHHHHHHhhh
Q 027609 123 CESFNTYP---RTYDLLHADHLFSTIKKSLKAVVAEVDR 158 (221)
Q Consensus 123 ~e~f~~yp---~sFDlVh~~~v~~h~~~d~~~vL~EmdR 158 (221)
-|.+.. ..||+|++-+. +.+++..+.++.+
T Consensus 79 --iF~P~~~~Y~~~DLIYsirP----P~El~~~i~~lA~ 111 (153)
T 2k4m_A 79 --ITSPRMEIYRGAALIYSIRP----PAEIHSSLMRVAD 111 (153)
T ss_dssp --SSSCCHHHHTTEEEEEEESC----CTTTHHHHHHHHH
T ss_pred --CCCCcccccCCcCEEEEcCC----CHHHHHHHHHHHH
Confidence 355443 48999987432 1155555655544
No 297
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.58 E-value=0.012 Score=51.04 Aligned_cols=42 Identities=19% Similarity=0.003 Sum_probs=35.0
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER 113 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR 113 (221)
.....|||.+||+|+++.+++..|. +++++|.+ ++++++.+|
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g~---~~~g~e~~~~~~~~a~~r 276 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWGR---RALGVELVPRYAQLAKER 276 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCC---eEEEEeCCHHHHHHHHHH
Confidence 4567899999999999999988875 46788876 588888887
No 298
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.53 E-value=0.05 Score=48.01 Aligned_cols=42 Identities=12% Similarity=0.260 Sum_probs=29.9
Q ss_pred cHHHHHHHhhhhccCCeEEEEEcCh-----------hhHHHHHHHHHhcCCeE
Q 027609 148 SLKAVVAEVDRILRPDGNLILRDDA-----------ETIVEVEDLVKSLHWDV 189 (221)
Q Consensus 148 d~~~vL~EmdRVLRPGG~~ii~d~~-----------~~~~~i~~i~~~l~W~~ 189 (221)
....+|.|+.|+|||||.+++.-.. ..+..+..++....|..
T Consensus 62 ~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~~~~~~~~~~i~~~~~~~Gf~~ 114 (323)
T 1boo_A 62 WFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPARSIYNFRVLIRMIDEVGFFL 114 (323)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECCCEETTEEEECCHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHCcCCcEEEEEECCEecCCCcccccchHHHHHHHHHhCCCEE
Confidence 5788999999999999999886222 12444555566666664
No 299
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=93.23 E-value=0.2 Score=44.11 Aligned_cols=91 Identities=20% Similarity=0.139 Sum_probs=51.3
Q ss_pred CCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-------CCHHHHHHcCccce-ec---cccccCCCCCCccCeeee
Q 027609 71 VRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-------DTLPIIYERGLFGL-YH---DWCESFNTYPRTYDLLHA 138 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-------~~l~~a~eRGl~~~-~~---d~~e~f~~yp~sFDlVh~ 138 (221)
..+|||+||++|+|+...+.+ ++. .|.++|.- .+. ...|-..+ .. |. ..++ |..+|.|.|
T Consensus 79 g~~VvDLGaapGGWSq~~a~~~g~~--~V~avdvG~~ghe~P~~~---~s~gwn~v~fk~gvDv-~~~~--~~~~Dtllc 150 (267)
T 3p8z_A 79 EGRVIDLGCGRGGWSYYCAGLKKVT--EVRGYTKGGPGHEEPVPM---STYGWNIVKLMSGKDV-FYLP--PEKCDTLLC 150 (267)
T ss_dssp CEEEEEESCTTSHHHHHHHTSTTEE--EEEEECCCSTTSCCCCCC---CCTTTTSEEEECSCCG-GGCC--CCCCSEEEE
T ss_pred CCEEEEcCCCCCcHHHHHHHhcCCC--EEEEEecCCCCccCcchh---hhcCcCceEEEeccce-eecC--CccccEEEE
Confidence 559999999999999966655 443 56666641 121 12332211 11 21 1233 366999999
Q ss_pred cccccccc-c-cHHH---HHHHhhhhccCCeEEEEEc
Q 027609 139 DHLFSTIK-K-SLKA---VVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 139 ~~v~~h~~-~-d~~~---vL~EmdRVLRPGG~~ii~d 170 (221)
+--=+.=. . +-+. +|.=+.+.|++ |.|++--
T Consensus 151 DIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KV 186 (267)
T 3p8z_A 151 DIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKV 186 (267)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEE
T ss_pred ecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEE
Confidence 84432111 0 1112 34334678898 7888873
No 300
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=92.77 E-value=0.41 Score=43.11 Aligned_cols=92 Identities=16% Similarity=0.263 Sum_probs=58.3
Q ss_pred CCeEEeecCcchHHHHHHhhCCCeEEEeccCCC--C-CCHHH-HHHcCccce-eccccccCCCCCCccCeeeeccccccc
Q 027609 71 VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIES--P-DTLPI-IYERGLFGL-YHDWCESFNTYPRTYDLLHADHLFSTI 145 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~--~-~~l~~-a~eRGl~~~-~~d~~e~f~~yp~sFDlVh~~~v~~h~ 145 (221)
..+||.+|.++|.++-+|...+++.+ .|. + ..++. ....|+.+. ++ +.....+.+..||+|.-. +
T Consensus 39 ~~~~~~~~d~~gal~~~~~~~~~~~~----~ds~~~~~~~~~n~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~-----l 108 (375)
T 4dcm_A 39 RGPVLILNDAFGALSCALAEHKPYSI----GDSYISELATRENLRLNGIDESSVK-FLDSTADYPQQPGVVLIK-----V 108 (375)
T ss_dssp CSCEEEECCSSSHHHHHTGGGCCEEE----ESCHHHHHHHHHHHHHTTCCGGGSE-EEETTSCCCSSCSEEEEE-----C
T ss_pred CCCEEEECCCCCHHHHhhccCCceEE----EhHHHHHHHHHHHHHHcCCCccceE-ecccccccccCCCEEEEE-----c
Confidence 35799999999999999987776543 232 1 12222 222345331 11 112233457899987753 3
Q ss_pred cc---cHHHHHHHhhhhccCCeEEEEEcCh
Q 027609 146 KK---SLKAVVAEVDRILRPDGNLILRDDA 172 (221)
Q Consensus 146 ~~---d~~~vL~EmdRVLRPGG~~ii~d~~ 172 (221)
+. .....|.++...|+||+.+++....
T Consensus 109 pk~~~~l~~~L~~l~~~l~~~~~i~~~g~~ 138 (375)
T 4dcm_A 109 PKTLALLEQQLRALRKVVTSDTRIIAGAKA 138 (375)
T ss_dssp CSCHHHHHHHHHHHHTTCCTTSEEEEEEEG
T ss_pred CCCHHHHHHHHHHHHhhCCCCCEEEEEecc
Confidence 33 5667788888899999999877543
No 301
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=90.34 E-value=0.24 Score=43.87 Aligned_cols=41 Identities=22% Similarity=0.341 Sum_probs=28.4
Q ss_pred CccCeeeecccc----------ccccccHHHHHHHhhhhccCCeEEEEEcC
Q 027609 131 RTYDLLHADHLF----------STIKKSLKAVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 131 ~sFDlVh~~~v~----------~h~~~d~~~vL~EmdRVLRPGG~~ii~d~ 171 (221)
++||+|.++==+ ..|......+|.|+.|+|+|||.+++.-.
T Consensus 57 ~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 57 DSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp TCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 677777665111 11222467889999999999999998743
No 302
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=89.43 E-value=5.2 Score=35.28 Aligned_cols=114 Identities=19% Similarity=0.247 Sum_probs=61.0
Q ss_pred CCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCC-CHHHHHHcCccce-eccccccCCCCC-CccCeeeec---ccccc
Q 027609 71 VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPD-TLPIIYERGLFGL-YHDWCESFNTYP-RTYDLLHAD---HLFST 144 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~-~l~~a~eRGl~~~-~~d~~e~f~~yp-~sFDlVh~~---~v~~h 144 (221)
..+|+|+-||.|+++..+...|..+ +..+|... .++..... .... ..|..+ +..-. ..+|+|+++ +-|+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~--v~~~e~d~~a~~t~~~N-~~~~~~~Di~~-~~~~~~~~~D~l~~gpPCQ~fS~ 86 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAEC--VYSNEWDKYAQEVYEMN-FGEKPEGDITQ-VNEKTIPDHDILCAGFPCQAFSI 86 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEE--EEEECCCHHHHHHHHHH-HSCCCBSCGGG-SCGGGSCCCSEEEEECCCTTTCT
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeE--EEEEeCCHHHHHHHHHH-cCCCCcCCHHH-cCHhhCCCCCEEEECCCCCCcch
Confidence 4689999999999999999998654 44555532 33322222 2111 233222 22111 358999876 23331
Q ss_pred cc-----ccHH-HHHHHhhhh---ccCCeEEEEEcCh---------hhHHHHHHHHHhcCCeEE
Q 027609 145 IK-----KSLK-AVVAEVDRI---LRPDGNLILRDDA---------ETIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 145 ~~-----~d~~-~vL~EmdRV---LRPGG~~ii~d~~---------~~~~~i~~i~~~l~W~~~ 190 (221)
.- +|+. .++.|+-|+ +||- +++-|.. ...+.+.+.+.++.+.+.
T Consensus 87 ag~~~g~~d~r~~L~~~~~r~i~~~~P~--~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~ 148 (327)
T 2c7p_A 87 SGKQKGFEDSRGTLFFDIARIVREKKPK--VVFMENVKNFASHDNGNTLEVVKNTMNELDYSFH 148 (327)
T ss_dssp TSCCCGGGSTTSCHHHHHHHHHHHHCCS--EEEEEEEGGGGTGGGGHHHHHHHHHHHHTTBCCE
T ss_pred hcccCCCcchhhHHHHHHHHHHHhccCc--EEEEeCcHHHHhccccHHHHHHHHHHHhCCCEEE
Confidence 10 1221 245555555 5785 4444332 234556666677776553
No 303
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=89.25 E-value=1.9 Score=38.44 Aligned_cols=82 Identities=12% Similarity=0.094 Sum_probs=55.6
Q ss_pred ccccccCCCCC-CccCeeeeccccccccccH----HHHHHHhhhhccCCeEEEEEcChhhHHHHHHHHHhcCCeEEEee-
Q 027609 120 HDWCESFNTYP-RTYDLLHADHLFSTIKKSL----KAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVRMIY- 193 (221)
Q Consensus 120 ~d~~e~f~~yp-~sFDlVh~~~v~~h~~~d~----~~vL~EmdRVLRPGG~~ii~d~~~~~~~i~~i~~~l~W~~~~~~- 193 (221)
+|..+.++.++ ..||++.-. -|+.-. || ..++..|.|.++|||.++-=... ..|++-++.-.+.+....
T Consensus 173 GDa~~~l~~l~~~~~Da~flD-gFsP~k-NPeLWs~e~f~~l~~~~~pgg~laTYtaa---g~VRR~L~~aGF~V~k~~G 247 (308)
T 3vyw_A 173 GDARKRIKEVENFKADAVFHD-AFSPYK-NPELWTLDFLSLIKERIDEKGYWVSYSSS---LSVRKSLLTLGFKVGSSRE 247 (308)
T ss_dssp SCHHHHGGGCCSCCEEEEEEC-CSCTTT-SGGGGSHHHHHHHHTTEEEEEEEEESCCC---HHHHHHHHHTTCEEEEEEC
T ss_pred chHHHHHhhhcccceeEEEeC-CCCccc-CcccCCHHHHHHHHHHhCCCcEEEEEeCc---HHHHHHHHHCCCEEEecCC
Confidence 45444455566 579998875 466323 44 58999999999999999854443 456677888889886543
Q ss_pred cCCCeeEEEEEec
Q 027609 194 TNDNQGMLCVHKT 206 (221)
Q Consensus 194 ~~~~e~~l~~~K~ 206 (221)
-..+...+++.++
T Consensus 248 ~g~KReml~A~~~ 260 (308)
T 3vyw_A 248 IGRKRKGTVASLK 260 (308)
T ss_dssp C---CEEEEEESS
T ss_pred CCCCCceeEEecC
Confidence 2345568888865
No 304
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=89.20 E-value=0.86 Score=39.03 Aligned_cols=85 Identities=14% Similarity=0.149 Sum_probs=54.3
Q ss_pred CCCeEEeecCcc-hHHHHHHhhC-CCeEEEeccCCCCCCHHHHHHcCccceeccccccCCCCCCccCeeeeccccccccc
Q 027609 70 FVRNVMDMRAVY-GGFAAALKDL-KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYPRTYDLLHADHLFSTIKK 147 (221)
Q Consensus 70 ~~r~VLD~GcG~-G~faa~L~~~-~v~vmnv~~~d~~~~l~~a~eRGl~~~~~d~~e~f~~yp~sFDlVh~~~v~~h~~~ 147 (221)
...+||=.|||. |.++..|++. |+.+ +.++.++-++.+.+-|...++.| .+.+ ++.||+|.-. . -
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~Ga~V---i~~~~~~~~~~~~~lGa~~v~~d-~~~v---~~g~Dvv~d~--~---g- 208 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNAGYVV---DLVSASLSQALAAKRGVRHLYRE-PSQV---TQKYFAIFDA--V---N- 208 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEE---EEECSSCCHHHHHHHTEEEEESS-GGGC---CSCEEEEECC--------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEE---EEEEChhhHHHHHHcCCCEEEcC-HHHh---CCCccEEEEC--C---C-
Confidence 478899999964 6666667654 6644 44444457888888776545544 3333 6778887643 1 1
Q ss_pred cHHHHHHHhhhhccCCeEEEEE
Q 027609 148 SLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 148 d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
...+.+.-+.|||||.+++-
T Consensus 209 --~~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 209 --SQNAAALVPSLKANGHIICI 228 (315)
T ss_dssp -------TTGGGEEEEEEEEEE
T ss_pred --chhHHHHHHHhcCCCEEEEE
Confidence 12236778999999999876
No 305
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=88.23 E-value=0.26 Score=43.69 Aligned_cols=42 Identities=10% Similarity=-0.011 Sum_probs=30.9
Q ss_pred CCCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHH
Q 027609 68 WSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYE 112 (221)
Q Consensus 68 ~~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~e 112 (221)
......++|.+||.|+.+.+|++++. .|+++|.. ++++.+.+
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~~g---~VigiD~Dp~Ai~~A~~ 62 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILERGG---RVIGLDQDPEAVARAKG 62 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHCCC---EEEEEeCCHHHHHHHHh
Confidence 33466899999999999999999843 45777764 36555543
No 306
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=87.53 E-value=1 Score=38.00 Aligned_cols=59 Identities=14% Similarity=0.052 Sum_probs=38.6
Q ss_pred cHHHHHHHhhhhccCCeEEEEEcChhhHHHHHHHHHhcCCeEEE--e-e------------cCCCeeEEEEEec
Q 027609 148 SLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVRM--I-Y------------TNDNQGMLCVHKT 206 (221)
Q Consensus 148 d~~~vL~EmdRVLRPGG~~ii~d~~~~~~~i~~i~~~l~W~~~~--~-~------------~~~~e~~l~~~K~ 206 (221)
....+|.|+.|+|+|||.+++.-.......+..++....|...- . . ....|-+|++.|.
T Consensus 52 ~~~~~l~~~~~~Lk~~g~i~v~~~d~~~~~~~~~~~~~gf~~~~~iiW~K~~~~~~~~~~~~~~hE~Il~~~K~ 125 (260)
T 1g60_A 52 FTYRWIDKVLDKLDKDGSLYIFNTPFNCAFICQYLVSKGMIFQNWITWDKRDGMGSAKRRFSTGQETILFFSKS 125 (260)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECHHHHHHHHHHHHHTTCEEEEEEEECCCCSCCCCSSSCBCCCEEEEEEESS
T ss_pred HHHHHHHHHHHHhcCCeEEEEEcCcHHHHHHHHHHHhhccceeEEEEEEecCCCccccCccccCCcEEEEEEeC
Confidence 45788999999999999999884333344444445555554421 1 0 1235889999886
No 307
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=87.22 E-value=1.8 Score=38.97 Aligned_cols=104 Identities=17% Similarity=0.195 Sum_probs=63.1
Q ss_pred CCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCCCC-HHHHHHcCccceeccccccCCCCCCccCeeeeccccccccc-
Q 027609 71 VRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESPDT-LPIIYERGLFGLYHDWCESFNTYPRTYDLLHADHLFSTIKK- 147 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~~~-l~~a~eRGl~~~~~d~~e~f~~yp~sFDlVh~~~v~~h~~~- 147 (221)
..+||++|-+.|.++.+|..+ .+++ +..+.. ......+|+.....+ +..+.|..||+|..- ++.
T Consensus 46 ~~~~l~~n~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~d~v~~~-----~Pk~ 112 (381)
T 3dmg_A 46 GERALDLNPGVGWGSLPLEGRMAVER-----LETSRAAFRCLTASGLQARLAL---PWEAAAGAYDLVVLA-----LPAG 112 (381)
T ss_dssp SSEEEESSCTTSTTTGGGBTTBEEEE-----EECBHHHHHHHHHTTCCCEECC---GGGSCTTCEEEEEEE-----CCGG
T ss_pred CCcEEEecCCCCccccccCCCCceEE-----EeCcHHHHHHHHHcCCCccccC---CccCCcCCCCEEEEE-----CCcc
Confidence 368999999999988888633 2332 222221 122334555432111 122346889987643 442
Q ss_pred ----cHHHHHHHhhhhccCCeEEEEEc-ChhhHHHHHHHHH-hcCC
Q 027609 148 ----SLKAVVAEVDRILRPDGNLILRD-DAETIVEVEDLVK-SLHW 187 (221)
Q Consensus 148 ----d~~~vL~EmdRVLRPGG~~ii~d-~~~~~~~i~~i~~-~l~W 187 (221)
..+..|.++.+.|+|||.+++.- ...-++++.+.++ .+.|
T Consensus 113 k~~~~~~~~l~~~~~~l~~g~~i~~~g~~~~g~~~~~~~~~~~~~~ 158 (381)
T 3dmg_A 113 RGTAYVQASLVAAARALRMGGRLYLAGDKNKGFERYFKEARALLGY 158 (381)
T ss_dssp GCHHHHHHHHHHHHHHEEEEEEEEEEEEGGGTHHHHHHHHHHHHSC
T ss_pred hhHHHHHHHHHHHHHhCCCCCEEEEEEccHHHHHHHHHHHHhhhcc
Confidence 24788999999999999987664 5555666655554 3444
No 308
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=86.38 E-value=3.8 Score=36.25 Aligned_cols=117 Identities=14% Similarity=0.168 Sum_probs=62.1
Q ss_pred CeEEeecCcchHHHHHHhhCCCeEEEeccCCCCC-CHHHHHHcCccc--e-eccccccCCC--CC-CccCeeeecc---c
Q 027609 72 RNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPD-TLPIIYERGLFG--L-YHDWCESFNT--YP-RTYDLLHADH---L 141 (221)
Q Consensus 72 r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~-~l~~a~eRGl~~--~-~~d~~e~f~~--yp-~sFDlVh~~~---v 141 (221)
.+|+|+-||.|+++..|...|...-.+..+|... .++..... ... . ..|..+ +.+ ++ ..+|+|+++- -
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N-~~~~~~~~~Di~~-~~~~~~~~~~~D~l~~gpPCq~ 80 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYN-FPHTQLLAKTIEG-ITLEEFDRLSFDMILMSPPCQP 80 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHH-CTTSCEECSCGGG-CCHHHHHHHCCSEEEECCC---
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHh-ccccccccCCHHH-ccHhHcCcCCcCEEEEcCCCcc
Confidence 4799999999999999988874211255666643 44443333 222 1 223222 221 22 2689999763 2
Q ss_pred ccccc-----cc-HHHHHHHhhhhc---c--CCeEEE--EEc--ChhhHHHHHHHHHhcCCeEE
Q 027609 142 FSTIK-----KS-LKAVVAEVDRIL---R--PDGNLI--LRD--DAETIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 142 ~~h~~-----~d-~~~vL~EmdRVL---R--PGG~~i--i~d--~~~~~~~i~~i~~~l~W~~~ 190 (221)
|+..- +| ....+.|+-|++ | |-=+++ +.. .....+.+.+.+..+.+++.
T Consensus 81 fS~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~l~~~~~~~~i~~~l~~~GY~v~ 144 (343)
T 1g55_A 81 FTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQ 144 (343)
T ss_dssp ---------------CHHHHHHHHGGGCSSCCSEEEEEEETTGGGSHHHHHHHHHHHHTTEEEE
T ss_pred hhhcCCcCCccCccchHHHHHHHHHHHhcCCCCEEEEeCCccccCHHHHHHHHHHHHHCCCeeE
Confidence 33211 02 223566666665 4 653333 221 12356677777778877765
No 309
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=85.27 E-value=0.47 Score=40.13 Aligned_cols=42 Identities=17% Similarity=-0.019 Sum_probs=32.9
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER 113 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR 113 (221)
.....|||..||+|+.+.+....|. ++.++|.. ..++++.+|
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~gr---~~ig~e~~~~~~~~~~~r 253 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLGR---NFIGCDMNAEYVNQANFV 253 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCC---eEEEEeCCHHHHHHHHHH
Confidence 3567899999999999998888775 35667765 477888777
No 310
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=84.93 E-value=0.41 Score=42.17 Aligned_cols=91 Identities=9% Similarity=0.011 Sum_probs=54.5
Q ss_pred CCCeEEeecCcc-hHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHcCccceec----cccccCCCC-CCccCeeeeccc
Q 027609 70 FVRNVMDMRAVY-GGFAAALKDL-KVWVMNVVPIESP-DTLPIIYERGLFGLYH----DWCESFNTY-PRTYDLLHADHL 141 (221)
Q Consensus 70 ~~r~VLD~GcG~-G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~----d~~e~f~~y-p~sFDlVh~~~v 141 (221)
...+||-.|||. |.+++.|++. |+. .|+.++.+ +.++.+.+.|...++. ++.+.+... ++.||+|.-.
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~--~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~-- 265 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGAS--IIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALES-- 265 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCS--EEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEEC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCC--eEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEEC--
Confidence 467899999986 6677777663 652 13444443 4677787777532221 111111101 1357877643
Q ss_pred cccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 142 FSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 142 ~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
.. ....+.+.-+.|||||.+++-
T Consensus 266 ---~g--~~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 266 ---TG--SPEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp ---SC--CHHHHHHHHHTEEEEEEEEEC
T ss_pred ---CC--CHHHHHHHHHHHhcCCEEEEe
Confidence 11 135678888999999999875
No 311
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=84.47 E-value=0.63 Score=41.50 Aligned_cols=96 Identities=16% Similarity=0.068 Sum_probs=56.8
Q ss_pred CCCeEEeecCcc-hHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHcCccceecccc-ccC-----CC-CC-CccCeeee
Q 027609 70 FVRNVMDMRAVY-GGFAAALKDL-KVWVMNVVPIESP-DTLPIIYERGLFGLYHDWC-ESF-----NT-YP-RTYDLLHA 138 (221)
Q Consensus 70 ~~r~VLD~GcG~-G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~d~~-e~f-----~~-yp-~sFDlVh~ 138 (221)
...+||-+|||. |.++..|++. |+. .|+.++.+ +.++.+.+.|.. .+ |.. +.+ .. .+ +.||+|.-
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~--~Vi~~~~~~~~~~~a~~lGa~-~i-~~~~~~~~~~~~~~~~~g~g~Dvvid 260 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAA--CVIVGDQNPERLKLLSDAGFE-TI-DLRNSAPLRDQIDQILGKPEVDCGVD 260 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCS--EEEEEESCHHHHHHHHTTTCE-EE-ETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCC--EEEEEcCCHHHHHHHHHcCCc-EE-cCCCcchHHHHHHHHhCCCCCCEEEE
Confidence 467999999987 7777777764 651 23555544 467788777752 22 211 111 00 12 36888764
Q ss_pred ccccccc-------cccHHHHHHHhhhhccCCeEEEEE
Q 027609 139 DHLFSTI-------KKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 139 ~~v~~h~-------~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
.---..+ +.++...+.+.-++|||||.+++-
T Consensus 261 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 261 AVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp CSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred CCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 3211100 001335788999999999999864
No 312
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=82.88 E-value=7.4 Score=35.02 Aligned_cols=113 Identities=17% Similarity=0.119 Sum_probs=61.7
Q ss_pred CeEEeecCcchHHHHHHhhCCCeEEEeccCCCCC-CHHHHHHcCccc--e-eccccccCCC--C------CCccCeeeec
Q 027609 72 RNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPD-TLPIIYERGLFG--L-YHDWCESFNT--Y------PRTYDLLHAD 139 (221)
Q Consensus 72 r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~-~l~~a~eRGl~~--~-~~d~~e~f~~--y------p~sFDlVh~~ 139 (221)
-+|+|+=||.|+++..|...|..+ +..+|... .++.. ++-.+. + ..|..+ +.. + +..+|+|+++
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~--v~avE~d~~a~~t~-~~N~~~~~~~~~DI~~-~~~~~~~~~~~~~~~~D~i~gg 78 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDV--KMAVEIDQHAINTH-AINFPRSLHVQEDVSL-LNAEIIKGFFKNDMPIDGIIGG 78 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEE--EEEECSCHHHHHHH-HHHCTTSEEECCCGGG-CCHHHHHHHHCSCCCCCEEEEC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcE--EEEEeCCHHHHHHH-HHhCCCCceEecChhh-cCHHHHHhhcccCCCeeEEEec
Confidence 479999999999999998888654 44566543 33332 222322 1 123222 211 1 2679999965
Q ss_pred ---ccccccc----cc-HHHHHHHhhhh---ccCCeEEE------EE-cChhhHHHHHHHHHhcCCeE
Q 027609 140 ---HLFSTIK----KS-LKAVVAEVDRI---LRPDGNLI------LR-DDAETIVEVEDLVKSLHWDV 189 (221)
Q Consensus 140 ---~v~~h~~----~d-~~~vL~EmdRV---LRPGG~~i------i~-d~~~~~~~i~~i~~~l~W~~ 189 (221)
+-|+..- +| ...++.|+-|+ +||-=+++ ++ +...+++.+. .+.++.+.+
T Consensus 79 pPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~~~v~ENV~gl~s~~~~~~~~~i~-~l~~~GY~v 145 (376)
T 3g7u_A 79 PPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQPLFFLAENVPGIMQEKYSGIRNKAF-NLVSGDYDI 145 (376)
T ss_dssp CCCCTTC-------CHHHHHHHHHHHHHHHHHCCSEEEEEECTTTTCGGGHHHHHHHH-HHHHTTEEE
T ss_pred CCCCCcccccCCCCCCchHHHHHHHHHHHHHhCCCEEEEecchHhhccCcHHHHHHHH-HHHcCCCcc
Confidence 3333111 12 22455555554 57864444 22 1223566666 677777776
No 313
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=81.55 E-value=2.1 Score=37.15 Aligned_cols=87 Identities=14% Similarity=0.068 Sum_probs=55.2
Q ss_pred CCCCeEEeecCcc-hHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHcCccceeccccccCCCCCCccCeeeeccccccc
Q 027609 69 SFVRNVMDMRAVY-GGFAAALKDL-KVWVMNVVPIESP-DTLPIIYERGLFGLYHDWCESFNTYPRTYDLLHADHLFSTI 145 (221)
Q Consensus 69 ~~~r~VLD~GcG~-G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~d~~e~f~~yp~sFDlVh~~~v~~h~ 145 (221)
....+||-.|||. |.++..|++. |+. |+.++.+ +.++.+.+.|...++.+ .+ .+.+.||+|.-. .
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~---Vi~~~~~~~~~~~~~~lGa~~v~~~-~~---~~~~~~D~vid~--~--- 242 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGAE---VSVFARNEHKKQDALSMGVKHFYTD-PK---QCKEELDFIIST--I--- 242 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCE---EEEECSSSTTHHHHHHTTCSEEESS-GG---GCCSCEEEEEEC--C---
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCe---EEEEeCCHHHHHHHHhcCCCeecCC-HH---HHhcCCCEEEEC--C---
Confidence 3477899999976 6677777653 654 4555543 57888888775444422 11 123478887643 1
Q ss_pred cccHHHHHHHhhhhccCCeEEEEE
Q 027609 146 KKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 146 ~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
. . ...+.+.-++|||||.+++-
T Consensus 243 g-~-~~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 243 P-T-HYDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp C-S-CCCHHHHHTTEEEEEEEEEC
T ss_pred C-c-HHHHHHHHHHHhcCCEEEEE
Confidence 1 0 12456677899999999986
No 314
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=81.26 E-value=3.6 Score=36.69 Aligned_cols=75 Identities=17% Similarity=0.284 Sum_probs=50.0
Q ss_pred CccCeeeec----cccccccc------cHHHHHHHhhhhccCCeEEEEEc----ChhhHHHHHHHHHhcCCeEEEee---
Q 027609 131 RTYDLLHAD----HLFSTIKK------SLKAVVAEVDRILRPDGNLILRD----DAETIVEVEDLVKSLHWDVRMIY--- 193 (221)
Q Consensus 131 ~sFDlVh~~----~v~~h~~~------d~~~vL~EmdRVLRPGG~~ii~d----~~~~~~~i~~i~~~l~W~~~~~~--- 193 (221)
..||||.++ .=.|||+. ....+=...-+-|+|||.++++- +..--+-|.+++++.+-..+..-
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alARkF~~~rv~~P~cv 289 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRKFRSSRALKPPCV 289 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEECCTTC
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHhhheeeeeecCccc
Confidence 899999776 33467774 33444456779999999999983 11123446777887776544332
Q ss_pred cCCCeeEEEEEe
Q 027609 194 TNDNQGMLCVHK 205 (221)
Q Consensus 194 ~~~~e~~l~~~K 205 (221)
+++.|.+|+..+
T Consensus 290 ~snTEv~~vF~~ 301 (324)
T 3trk_A 290 TSNTEMFFLFSN 301 (324)
T ss_dssp CBTTCEEEEEEE
T ss_pred cccceEEEEEEe
Confidence 456788888765
No 315
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=81.18 E-value=0.59 Score=41.51 Aligned_cols=96 Identities=17% Similarity=0.027 Sum_probs=57.9
Q ss_pred CCCeEEeecCcc-hHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceec--c---ccccCCC-CC-CccCeeeec
Q 027609 70 FVRNVMDMRAVY-GGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYH--D---WCESFNT-YP-RTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~GcG~-G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~--d---~~e~f~~-yp-~sFDlVh~~ 139 (221)
...+||-+|||. |.++..|++ .|+. .|+.++.+ +.++.+.+-|.. .+. + +.+.+.. .. +.||+|.-.
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~--~Vi~~~~~~~~~~~a~~lGa~-~i~~~~~~~~~~~v~~~t~g~g~Dvvid~ 261 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAA--VVIVGDLNPARLAHAKAQGFE-IADLSLDTPLHEQIAALLGEPEVDCAVDA 261 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCS--EEEEEESCHHHHHHHHHTTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCC--eEEEEcCCHHHHHHHHHcCCc-EEccCCcchHHHHHHHHhCCCCCCEEEEC
Confidence 467899999976 777777766 3653 23445544 467888887763 221 0 1111110 12 468887643
Q ss_pred ccc---------ccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 140 HLF---------STIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 140 ~v~---------~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
--. .|.. ++...+.+.-++|||||.+++-
T Consensus 262 ~G~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 262 VGFEARGHGHEGAKHE-APATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp CCTTCBCSSTTGGGSB-CTTHHHHHHHHHEEEEEEEEEC
T ss_pred CCCccccccccccccc-chHHHHHHHHHHHhcCCEEEEe
Confidence 211 1222 4556889999999999999874
No 316
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=80.51 E-value=1.5 Score=34.81 Aligned_cols=56 Identities=25% Similarity=0.310 Sum_probs=38.0
Q ss_pred CCCC-CccCeeeeccccc-cccccHHHHHHHhhhhccCCeEEEEEcChhhHHHHHHHHHhc
Q 027609 127 NTYP-RTYDLLHADHLFS-TIKKSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSL 185 (221)
Q Consensus 127 ~~yp-~sFDlVh~~~v~~-h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~~~~~i~~i~~~l 185 (221)
-..| ++||+||-=.=-. ....-+..+|.=+.+-|||||.|.- -+.-.+++.|+.++
T Consensus 53 VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g---l~~~~~~EailaGf 110 (136)
T 2km1_A 53 ITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG---LSDIYKVDALINGF 110 (136)
T ss_dssp CCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC---CCHHHHHHHHHHTE
T ss_pred ccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe---cCcchhhHHHhhcc
Confidence 3466 9999998421000 1111357899999999999999996 11146788888776
No 317
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=79.96 E-value=23 Score=31.18 Aligned_cols=117 Identities=11% Similarity=0.161 Sum_probs=66.4
Q ss_pred CCeEEeecCcchHHHHHHhhCCC--eEEEe-ccCCCCCCHHHHHHcCccce--eccccccCCC--CC-CccCeeeecccc
Q 027609 71 VRNVMDMRAVYGGFAAALKDLKV--WVMNV-VPIESPDTLPIIYERGLFGL--YHDWCESFNT--YP-RTYDLLHADHLF 142 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~~v--~vmnv-~~~d~~~~l~~a~eRGl~~~--~~d~~e~f~~--yp-~sFDlVh~~~v~ 142 (221)
--+|+|+=||.||+...|...|. .+ + ..+|........+++-.+.. ..|..+ +.+ +| ..+|+++++-=.
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~--v~~a~e~d~~a~~ty~~N~~~~~~~~DI~~-~~~~~i~~~~~Dil~ggpPC 86 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININA--TFIPFDINEIANKIYSKNFKEEVQVKNLDS-ISIKQIESLNCNTWFMSPPC 86 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCE--EEEEECCCHHHHHHHHHHHCCCCBCCCTTT-CCHHHHHHTCCCEEEECCCC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceE--EEEEEECCHHHHHHHHHHCCCCcccCChhh-cCHHHhccCCCCEEEecCCc
Confidence 34799999999999999988874 33 3 45565432222233322222 223322 211 23 368999976332
Q ss_pred ccc-----------cccHHHHHHHhhh-hccC---CeEEEEEcCh------hhHHHHHHHHHhcCCeEE
Q 027609 143 STI-----------KKSLKAVVAEVDR-ILRP---DGNLILRDDA------ETIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 143 ~h~-----------~~d~~~vL~EmdR-VLRP---GG~~ii~d~~------~~~~~i~~i~~~l~W~~~ 190 (221)
+.+ .+.....+.|+-| +++- --.+++-|.. ...+.+.+.+.++.+.+.
T Consensus 87 Q~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~~~~~~~~i~~~l~~~GY~v~ 155 (327)
T 3qv2_A 87 QPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFKESLVFKEIYNILIKNQYYIK 155 (327)
T ss_dssp TTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGGGSHHHHHHHHHHHHTTCEEE
T ss_pred cCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhcChHHHHHHHHHHHhCCCEEE
Confidence 222 1122367888888 7642 1234444433 245667777888888765
No 318
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=79.81 E-value=2.6 Score=36.40 Aligned_cols=89 Identities=12% Similarity=0.062 Sum_probs=52.1
Q ss_pred CCCeEEeecCc--chHHHHHHhhC-CCeEEEeccCCC-CCCHHHHHHcCccceec----cccccCCC-CC-CccCeeeec
Q 027609 70 FVRNVMDMRAV--YGGFAAALKDL-KVWVMNVVPIES-PDTLPIIYERGLFGLYH----DWCESFNT-YP-RTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~GcG--~G~faa~L~~~-~v~vmnv~~~d~-~~~l~~a~eRGl~~~~~----d~~e~f~~-yp-~sFDlVh~~ 139 (221)
...+||-.||| .|.+++.+++. |+.+ +.++. ++.++.+.+-|...++. ++.+.+.. .. +.||+|...
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~V---i~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~ 220 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRL---IAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDS 220 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEE---EEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEE---EEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEEC
Confidence 46799999987 67777777653 6644 44444 34677787766432221 11111100 12 578887653
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
. - ...+.+.-+.|||||.+++-
T Consensus 221 ~-----g---~~~~~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 221 I-----G---GPDGNELAFSLRPNGHFLTI 242 (340)
T ss_dssp S-----C---HHHHHHHHHTEEEEEEEEEC
T ss_pred C-----C---ChhHHHHHHHhcCCCEEEEE
Confidence 1 1 12234455899999999875
No 319
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=79.45 E-value=0.97 Score=39.56 Aligned_cols=91 Identities=14% Similarity=0.050 Sum_probs=54.1
Q ss_pred CCCeEEeecCcc-hHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceec-------cccccCCC-CCCccCeeee
Q 027609 70 FVRNVMDMRAVY-GGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYH-------DWCESFNT-YPRTYDLLHA 138 (221)
Q Consensus 70 ~~r~VLD~GcG~-G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~-------d~~e~f~~-yp~sFDlVh~ 138 (221)
...+||-.|||. |.++..|++ .|+. .|+.++.+ +.++.+.+.|...++. ++.+.+.. .++.||+|.-
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~--~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid 248 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAA--QVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIE 248 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCS--EEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCC--EEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEE
Confidence 467899999985 667777766 4652 23445543 4677787777532221 11111100 0146888764
Q ss_pred ccccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 139 DHLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 139 ~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
. .. . ...+.+.-++|||||.+++-
T Consensus 249 ~-----~g-~-~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 249 C-----TG-A-EASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp C-----SC-C-HHHHHHHHHHSCTTCEEEEC
T ss_pred C-----CC-C-hHHHHHHHHHhcCCCEEEEE
Confidence 3 11 1 24677888999999999875
No 320
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=78.53 E-value=2.4 Score=37.71 Aligned_cols=99 Identities=11% Similarity=0.100 Sum_probs=60.3
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHH----HcCc--------------------cceec----
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIY----ERGL--------------------FGLYH---- 120 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~----eRGl--------------------~~~~~---- 120 (221)
...+.|+.+|||+.+.+-.|...... +.+..+|.|++++.-. +.+. ...++
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~-~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPH-LAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTT-EEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCC-CEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 45789999999999999999874111 2467888876554322 2110 01111
Q ss_pred -----cccc----cCCCCCCccCeeeeccccccccc-cHHHHHHHhhhhccCCeEEEEEc
Q 027609 121 -----DWCE----SFNTYPRTYDLLHADHLFSTIKK-SLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 121 -----d~~e----~f~~yp~sFDlVh~~~v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
+|-+ ... -++...++.+-.|+..++. .-..+|..+.+.+ |+|.+++-|
T Consensus 175 DL~d~~w~~~ll~~~~-d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e 232 (334)
T 1rjd_A 175 DLNDITETTRLLDVCT-KREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYD 232 (334)
T ss_dssp CTTCHHHHHHHHHTTC-CTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEE
T ss_pred CCCCcHHHHHHHHhcC-CCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEe
Confidence 3421 111 1266788888888887665 4445555566555 888877554
No 321
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=78.28 E-value=1.3 Score=35.02 Aligned_cols=90 Identities=13% Similarity=0.085 Sum_probs=51.1
Q ss_pred CCCeEEeecC--cchHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceecccc-----ccCCC-CC-CccCeeee
Q 027609 70 FVRNVMDMRA--VYGGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYHDWC-----ESFNT-YP-RTYDLLHA 138 (221)
Q Consensus 70 ~~r~VLD~Gc--G~G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~d~~-----e~f~~-yp-~sFDlVh~ 138 (221)
..++||..|+ |.|..++.++. .|..+ +.++.+ +.++.+.+.|.... .|.. +.+.. .. +.+|+|..
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V---~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~~~~~~~~~D~vi~ 113 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARI---YTTAGSDAKREMLSRLGVEYV-GDSRSVDFADEILELTDGYGVDVVLN 113 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEE---EEEESSHHHHHHHHTTCCSEE-EETTCSTHHHHHHHHTTTCCEEEEEE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEE---EEEeCCHHHHHHHHHcCCCEE-eeCCcHHHHHHHHHHhCCCCCeEEEE
Confidence 4688999995 55665555544 46543 444443 35556655553211 1211 11100 12 46888775
Q ss_pred ccccccccccHHHHHHHhhhhccCCeEEEEEcC
Q 027609 139 DHLFSTIKKSLKAVVAEVDRILRPDGNLILRDD 171 (221)
Q Consensus 139 ~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~ 171 (221)
+. . ...+.+.-+.|||||.+++--.
T Consensus 114 ~~--g------~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 114 SL--A------GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp CC--C------THHHHHHHHTEEEEEEEEECSC
T ss_pred CC--c------hHHHHHHHHHhccCCEEEEEcC
Confidence 42 1 2467788899999999987643
No 322
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=77.92 E-value=1.8 Score=38.20 Aligned_cols=91 Identities=14% Similarity=0.129 Sum_probs=55.2
Q ss_pred CCCeEEeecCcc-hHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceec----cccccCCC---C-CCccCeeee
Q 027609 70 FVRNVMDMRAVY-GGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYH----DWCESFNT---Y-PRTYDLLHA 138 (221)
Q Consensus 70 ~~r~VLD~GcG~-G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~----d~~e~f~~---y-p~sFDlVh~ 138 (221)
...+||=.|||. |.++..|++ .|+. .|+.++.+ +.++.+.+-|...++. |+.+.+.. . ++.||+|.-
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~--~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid 259 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGAT--TVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIE 259 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCS--EEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCC--EEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEE
Confidence 367899899875 666666665 3652 23445544 4677888877643331 11111110 1 246888764
Q ss_pred ccccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 139 DHLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 139 ~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
. .- -...+.+.-+.|||||.+++-
T Consensus 260 ~-----~G--~~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 260 C-----AG--VAETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp C-----SC--CHHHHHHHHHHEEEEEEEEEC
T ss_pred C-----CC--CHHHHHHHHHHhccCCEEEEE
Confidence 3 11 135788888999999999886
No 323
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=77.79 E-value=1.6 Score=39.80 Aligned_cols=44 Identities=11% Similarity=0.057 Sum_probs=33.4
Q ss_pred CCCCCCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCC-CCHHHH
Q 027609 66 INWSFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESP-DTLPII 110 (221)
Q Consensus 66 i~~~~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a 110 (221)
+.......++|..||.|+.+.+|+++ +-. ..|.++|.. ++++.+
T Consensus 53 L~i~pggiyVD~TlG~GGHS~~iL~~lg~~-GrVig~D~Dp~Al~~A 98 (347)
T 3tka_A 53 LNIRPDGIYIDGTFGRGGHSRLILSQLGEE-GRLLAIDRDPQAIAVA 98 (347)
T ss_dssp TCCCTTCEEEESCCTTSHHHHHHHTTCCTT-CEEEEEESCHHHHHHH
T ss_pred hCCCCCCEEEEeCcCCCHHHHHHHHhCCCC-CEEEEEECCHHHHHHH
Confidence 44445778999999999999999987 211 247888886 578777
No 324
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=77.73 E-value=0.99 Score=38.89 Aligned_cols=88 Identities=13% Similarity=0.151 Sum_probs=50.8
Q ss_pred CCCeEEeecC--cchHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceeccccc------cCCC-CCCccCeeee
Q 027609 70 FVRNVMDMRA--VYGGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYHDWCE------SFNT-YPRTYDLLHA 138 (221)
Q Consensus 70 ~~r~VLD~Gc--G~G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~d~~e------~f~~-yp~sFDlVh~ 138 (221)
..++||-.|| |.|.+++.++. .|..+ +.++.+ +.++.+.+.|.. ...|..+ .+.. ..+.+|++..
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V---~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~ 220 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKV---VGAAGSDEKIAYLKQIGFD-AAFNYKTVNSLEEALKKASPDGYDCYFD 220 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEE---EEEESSHHHHHHHHHTTCS-EEEETTSCSCHHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEE---EEEeCCHHHHHHHHhcCCc-EEEecCCHHHHHHHHHHHhCCCCeEEEE
Confidence 4688999998 66666666554 56543 444443 356666555532 1112111 0100 1145787765
Q ss_pred ccccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 139 DHLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 139 ~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
+. - ...+.+.-+.|||||.+++-
T Consensus 221 ~~-----g---~~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 221 NV-----G---GEFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp SS-----C---HHHHHHHHTTEEEEEEEEEC
T ss_pred CC-----C---hHHHHHHHHHHhcCCEEEEE
Confidence 42 1 13578888999999999865
No 325
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=77.11 E-value=4.5 Score=35.52 Aligned_cols=98 Identities=13% Similarity=0.167 Sum_probs=60.9
Q ss_pred CCCeEEeecCcchHHHHHHhhC-CCeEEEeccCCCCCCHHHHHHc----Cc--cceec--------cccccC--CCCC-C
Q 027609 70 FVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESPDTLPIIYER----GL--FGLYH--------DWCESF--NTYP-R 131 (221)
Q Consensus 70 ~~r~VLD~GcG~G~faa~L~~~-~v~vmnv~~~d~~~~l~~a~eR----Gl--~~~~~--------d~~e~f--~~yp-~ 131 (221)
.++.|+++|||.=+.+-.|... ++ .+..+|.+..++...+. |. .+.++ +|.+.+ ..|+ .
T Consensus 102 g~~QvV~LGaGlDTra~Rl~~~~~~---~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLDWPTGT---TVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPS 178 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSCCCTTC---EEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTT
T ss_pred CCCeEEEeCCCCCchhhhccCCCCc---EEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCC
Confidence 3678999999999998888632 33 35677766555432222 11 11111 232221 1132 3
Q ss_pred ccCeeeeccccccccc-cHHHHHHHhhhhccCCeEEEEEc
Q 027609 132 TYDLLHADHLFSTIKK-SLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 132 sFDlVh~~~v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
.-=++.+-.++++++. +...+|..+...+-||+++++.-
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~ 218 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVET 218 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEC
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEe
Confidence 3335667777777665 67778888888888999999984
No 326
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=74.73 E-value=1.7 Score=38.03 Aligned_cols=89 Identities=12% Similarity=0.085 Sum_probs=52.1
Q ss_pred CCCeEEeecCcc-hHHHHHHhhC-CCeEEEeccCCC-CCCHHHHHHcCccceec-----cccccCCCCCCccCeeeeccc
Q 027609 70 FVRNVMDMRAVY-GGFAAALKDL-KVWVMNVVPIES-PDTLPIIYERGLFGLYH-----DWCESFNTYPRTYDLLHADHL 141 (221)
Q Consensus 70 ~~r~VLD~GcG~-G~faa~L~~~-~v~vmnv~~~d~-~~~l~~a~eRGl~~~~~-----d~~e~f~~yp~sFDlVh~~~v 141 (221)
...+||-.|||. |.+++.|++. |+. |+.++. ++.++.+.+-|...++. ++.+.+. +.||+|....-
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~---Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~---~~~D~vid~~g 252 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAE---TYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYF---DTFDLIVVCAS 252 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCE---EEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSC---SCEEEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCE---EEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhh---cCCCEEEECCC
Confidence 467999999864 5566666653 654 444554 35678887776432221 2211111 46888764321
Q ss_pred cccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 142 FSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 142 ~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
. . ....+.+.-++|||||.+++-
T Consensus 253 ~--~---~~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 253 S--L---TDIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp C--S---TTCCTTTGGGGEEEEEEEEEC
T ss_pred C--C---cHHHHHHHHHHhcCCCEEEEe
Confidence 1 0 013355677899999999864
No 327
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=74.06 E-value=2.5 Score=36.75 Aligned_cols=90 Identities=13% Similarity=0.094 Sum_probs=54.6
Q ss_pred CCCeEEeecCcc-hHHHHHHhhC-CC-eEEEeccCCCC-CCHHHHHHcCccceec----cccccCCC-CC-CccCeeeec
Q 027609 70 FVRNVMDMRAVY-GGFAAALKDL-KV-WVMNVVPIESP-DTLPIIYERGLFGLYH----DWCESFNT-YP-RTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~GcG~-G~faa~L~~~-~v-~vmnv~~~d~~-~~l~~a~eRGl~~~~~----d~~e~f~~-yp-~sFDlVh~~ 139 (221)
...+||=.|||. |.++..|++. |+ .+ +.++.+ +.++.+.+-|...++. ++.+.+.. .+ +.||+|.-.
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~V---i~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~ 242 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRI---FAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIA 242 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSE---EEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEE---EEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEEC
Confidence 467889899876 6677777664 55 33 445554 3678888877533321 11111110 12 568887643
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
. - . ...+.+.-+.|||||.+++-
T Consensus 243 ~-----g-~-~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 243 G-----G-D-VHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp S-----S-C-TTHHHHHHHHEEEEEEEEEC
T ss_pred C-----C-C-hHHHHHHHHHHhcCCEEEEe
Confidence 1 1 1 24677888999999999865
No 328
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=73.92 E-value=3.6 Score=35.95 Aligned_cols=91 Identities=10% Similarity=-0.094 Sum_probs=53.7
Q ss_pred CCCeEEeecCcc-hHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHcCccceec------cccccCCCC-CCccCeeeec
Q 027609 70 FVRNVMDMRAVY-GGFAAALKDL-KVWVMNVVPIESP-DTLPIIYERGLFGLYH------DWCESFNTY-PRTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~GcG~-G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~------d~~e~f~~y-p~sFDlVh~~ 139 (221)
...+||-.|||. |.+++.|++. |+. .|+.++.+ +.++.+.+-|...++. ++.+.+... ++.||+|.-.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~--~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~ 267 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGAS--RIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFEC 267 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCS--EEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEEC
Confidence 367899999875 5566666653 652 23455543 4777887777533321 111111101 1368887643
Q ss_pred cccccccccHHHHHHHhhhhccCC-eEEEEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPD-GNLILR 169 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPG-G~~ii~ 169 (221)
.. -...+.+.-+.|||| |.+++-
T Consensus 268 -----~g--~~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 268 -----IG--NVKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp -----SC--CHHHHHHHHHTBCTTTCEEEEC
T ss_pred -----CC--cHHHHHHHHHhhccCCcEEEEE
Confidence 11 135678888999999 999875
No 329
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=72.39 E-value=4.3 Score=35.51 Aligned_cols=91 Identities=9% Similarity=-0.068 Sum_probs=53.2
Q ss_pred CCCeEEeecCcc-hHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceec------cccccCCCC-CCccCeeeec
Q 027609 70 FVRNVMDMRAVY-GGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYH------DWCESFNTY-PRTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~GcG~-G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~------d~~e~f~~y-p~sFDlVh~~ 139 (221)
...+||-.|||. |.+++.|++ .|+. .|+.++.+ +.++.+.+-|...++. ++.+.+... ++.||+|.-.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~--~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~ 268 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAA--RIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEV 268 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCS--EEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEEC
Confidence 367899999876 566666665 3652 23445543 4677887777532221 111111101 1368887643
Q ss_pred cccccccccHHHHHHHhhhhccCC-eEEEEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPD-GNLILR 169 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPG-G~~ii~ 169 (221)
.. . ...+.+.-+.|||| |.+++-
T Consensus 269 -----~g-~-~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 269 -----IG-R-LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp -----SC-C-HHHHHHHHHHBCTTTCEEEEC
T ss_pred -----CC-C-HHHHHHHHHHhhcCCcEEEEe
Confidence 11 1 35677888999999 998874
No 330
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=71.91 E-value=2.1 Score=36.92 Aligned_cols=91 Identities=11% Similarity=-0.027 Sum_probs=54.6
Q ss_pred CCCCeEEeecCcc-hHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHcCccceec----cccccCCCCCCccCeeeeccc
Q 027609 69 SFVRNVMDMRAVY-GGFAAALKDL-KVWVMNVVPIESP-DTLPIIYERGLFGLYH----DWCESFNTYPRTYDLLHADHL 141 (221)
Q Consensus 69 ~~~r~VLD~GcG~-G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~----d~~e~f~~yp~sFDlVh~~~v 141 (221)
....+||-.|||. |.++..|++. |+. |+.++.+ +.++.+.+.|...++. ++.+.+..-.+.+|+|.-.
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~---Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~-- 239 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGLR---VAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVT-- 239 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTCE---EEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEES--
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEe--
Confidence 3467899999975 7777777664 664 4555554 4677888777533321 1111000001246665432
Q ss_pred cccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 142 FSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 142 ~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
.. -...+.+.-+.|||||.+++-
T Consensus 240 ---~g--~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 240 ---AV--SPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp ---SC--CHHHHHHHHHHEEEEEEEEEC
T ss_pred ---CC--CHHHHHHHHHHhccCCEEEEe
Confidence 11 145778888999999999886
No 331
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=71.71 E-value=4.7 Score=35.29 Aligned_cols=91 Identities=10% Similarity=-0.094 Sum_probs=53.7
Q ss_pred CCCeEEeecCcc-hHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHcCccceec------cccccCCCC-CCccCeeeec
Q 027609 70 FVRNVMDMRAVY-GGFAAALKDL-KVWVMNVVPIESP-DTLPIIYERGLFGLYH------DWCESFNTY-PRTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~GcG~-G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~------d~~e~f~~y-p~sFDlVh~~ 139 (221)
...+||=+|||. |.+++.|++. |+. .|+.++.+ +-++.+.+-|...++. ++.+.+... ++.||+|.-.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~--~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~ 268 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGAS--RIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVEC 268 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCS--EEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCC--eEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEEC
Confidence 367899999875 6666666654 652 23445543 4678888777533221 111111001 2368887643
Q ss_pred cccccccccHHHHHHHhhhhccCC-eEEEEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPD-GNLILR 169 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPG-G~~ii~ 169 (221)
.- -...+.+.-+.|||| |.+++-
T Consensus 269 -----~g--~~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 269 -----AG--RIETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp -----SC--CHHHHHHHHHTBCTTTCEEEEC
T ss_pred -----CC--CHHHHHHHHHHHhcCCCEEEEE
Confidence 11 135677888999999 999875
No 332
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=71.61 E-value=46 Score=28.21 Aligned_cols=127 Identities=14% Similarity=0.202 Sum_probs=69.1
Q ss_pred eEEeecCcchHHHHHHhhCCCeEEEeccCCCCC-CHHHHHHcCccc--eeccccccCCCCC-CccCeeeec---cccccc
Q 027609 73 NVMDMRAVYGGFAAALKDLKVWVMNVVPIESPD-TLPIIYERGLFG--LYHDWCESFNTYP-RTYDLLHAD---HLFSTI 145 (221)
Q Consensus 73 ~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~-~l~~a~eRGl~~--~~~d~~e~f~~yp-~sFDlVh~~---~v~~h~ 145 (221)
+|+|+=||.|||...|...|..+ +..+|... ..+ .++.-.+. ...|..+ +..-. ...|+++++ |-|+.-
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~--v~a~e~d~~a~~-ty~~N~~~~~~~~DI~~-i~~~~~~~~D~l~ggpPCQ~fS~a 77 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRI--ICANEYDKSIWK-TYESNHSAKLIKGDISK-ISSDEFPKCDGIIGGPPSQSWSEG 77 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEE--EEEEECCTTTHH-HHHHHCCSEEEESCGGG-CCGGGSCCCSEEECCCCGGGTEET
T ss_pred eEEEeCcCccHHHHHHHHCCCEE--EEEEeCCHHHHH-HHHHHCCCCcccCChhh-CCHhhCCcccEEEecCCCCCcCCC
Confidence 79999999999999999888655 33444432 333 22222322 2334433 32212 457998865 334311
Q ss_pred c-----ccH-HHHHHHhhhh---ccCCeEEEEEcCh---------hhHHHHHHHHHhcCCeEEE--eec------CCCee
Q 027609 146 K-----KSL-KAVVAEVDRI---LRPDGNLILRDDA---------ETIVEVEDLVKSLHWDVRM--IYT------NDNQG 199 (221)
Q Consensus 146 ~-----~d~-~~vL~EmdRV---LRPGG~~ii~d~~---------~~~~~i~~i~~~l~W~~~~--~~~------~~~e~ 199 (221)
- +|+ ..++.|+-|+ +||- +++-|.. ...+.+...+.++.+.+.. .+. +.+++
T Consensus 78 g~~~g~~d~R~~L~~~~~r~i~~~~Pk--~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~~vlna~~yGvPQ~R~R 155 (331)
T 3ubt_Y 78 GSLRGIDDPRGKLFYEYIRILKQKKPI--FFLAENVKGMMAQRHNKAVQEFIQEFDNAGYDVHIILLNANDYGVAQDRKR 155 (331)
T ss_dssp TEECCTTCGGGHHHHHHHHHHHHHCCS--EEEEEECCGGGGCTTSHHHHHHHHHHHHHTEEEEEEEEEGGGTTCSBCCEE
T ss_pred CCccCCCCchhHHHHHHHHHHhccCCe--EEEeeeecccccccccchhhhhhhhhccCCcEEEEEecccccCCCCcccce
Confidence 1 122 3566666666 5795 3333332 3456666667777766542 232 34666
Q ss_pred E-EEEEe
Q 027609 200 M-LCVHK 205 (221)
Q Consensus 200 ~-l~~~K 205 (221)
+ +|+.+
T Consensus 156 vfivg~r 162 (331)
T 3ubt_Y 156 VFYIGFR 162 (331)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 5 55554
No 333
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=71.32 E-value=3.8 Score=35.91 Aligned_cols=91 Identities=10% Similarity=-0.046 Sum_probs=53.2
Q ss_pred CCCeEEeecCcc-hHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceec--c----ccccCCCC-CCccCeeeec
Q 027609 70 FVRNVMDMRAVY-GGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYH--D----WCESFNTY-PRTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~GcG~-G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~--d----~~e~f~~y-p~sFDlVh~~ 139 (221)
...+||-.|||. |.++..|++ .|+. .|+.++.+ +.++.+.+-|...++. + +.+.+... .+.||+|.-.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~--~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~ 269 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAK--RIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLEC 269 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCS--EEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCC--EEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEEC
Confidence 367899999875 566666665 3652 23445543 4777887777532221 1 11101001 1357877643
Q ss_pred cccccccccHHHHHHHhhhhccCC-eEEEEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPD-GNLILR 169 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPG-G~~ii~ 169 (221)
.. -...+.+.-+.|||| |.+++-
T Consensus 270 -----~g--~~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 270 -----VG--NVGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp -----SC--CHHHHHHHHHTBCTTTCEEEEC
T ss_pred -----CC--CHHHHHHHHHHhhcCCcEEEEE
Confidence 11 135678888999999 999875
No 334
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=70.53 E-value=2.9 Score=36.87 Aligned_cols=87 Identities=14% Similarity=0.134 Sum_probs=52.2
Q ss_pred CCCeEEeecCcc-hHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceec----cccccCCCCCCccCeeeecccc
Q 027609 70 FVRNVMDMRAVY-GGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYH----DWCESFNTYPRTYDLLHADHLF 142 (221)
Q Consensus 70 ~~r~VLD~GcG~-G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~----d~~e~f~~yp~sFDlVh~~~v~ 142 (221)
...+||-.|||. |.++..|++ .|+.| +.++.+ +.++.+.+-|...++. ++.+.+ .+.||+|.-.---
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~V---i~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~---~~g~Dvvid~~g~ 267 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHV---VAFTTSEAKREAAKALGADEVVNSRNADEMAAH---LKSFDFILNTVAA 267 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEE---EEEESSGGGHHHHHHHTCSEEEETTCHHHHHTT---TTCEEEEEECCSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEE---EEEeCCHHHHHHHHHcCCcEEeccccHHHHHHh---hcCCCEEEECCCC
Confidence 467899999985 667777765 46543 444433 4677777766432221 111111 1568887643111
Q ss_pred ccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 143 STIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 143 ~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
...+.+.-++|||||.+++-
T Consensus 268 -------~~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 268 -------PHNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp -------CCCHHHHHTTEEEEEEEEEC
T ss_pred -------HHHHHHHHHHhccCCEEEEe
Confidence 12356677899999999875
No 335
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=70.50 E-value=9.6 Score=37.18 Aligned_cols=75 Identities=16% Similarity=0.216 Sum_probs=48.2
Q ss_pred CccCeeeec----cccccccc------cHHHHHHHhhhhccCCeEEEEEcC----hhhHHHHHHHHHhcCCeEEEee---
Q 027609 131 RTYDLLHAD----HLFSTIKK------SLKAVVAEVDRILRPDGNLILRDD----AETIVEVEDLVKSLHWDVRMIY--- 193 (221)
Q Consensus 131 ~sFDlVh~~----~v~~h~~~------d~~~vL~EmdRVLRPGG~~ii~d~----~~~~~~i~~i~~~l~W~~~~~~--- 193 (221)
..||+|.++ .-.|||+. ....+=...-+-|+|||.++++-= ..--+-|.+++++.+-..+..-
T Consensus 220 ~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRkF~~~rv~~p~~~ 299 (670)
T 4gua_A 220 ARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARKFVRVSAARPDCV 299 (670)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHTEEEEEEECCTTC
T ss_pred CcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhheeeeeeeCCCcc
Confidence 789998776 34577875 333444556789999999999831 1112345777887776544332
Q ss_pred cCCCeeEEEEEe
Q 027609 194 TNDNQGMLCVHK 205 (221)
Q Consensus 194 ~~~~e~~l~~~K 205 (221)
+++.|.+|+.+-
T Consensus 300 ~snTEv~~~f~~ 311 (670)
T 4gua_A 300 SSNTEMYLIFRQ 311 (670)
T ss_dssp SBTTCEEEEEEE
T ss_pred ccCceEEEEEEe
Confidence 455787777654
No 336
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=70.45 E-value=33 Score=29.61 Aligned_cols=105 Identities=11% Similarity=0.215 Sum_probs=65.3
Q ss_pred CCCeEEeecCcc--hHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCccce-eccccccCCC-CCCccCeeeecccccc
Q 027609 70 FVRNVMDMRAVY--GGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLFGL-YHDWCESFNT-YPRTYDLLHADHLFST 144 (221)
Q Consensus 70 ~~r~VLD~GcG~--G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~~~-~~d~~e~f~~-yp~sFDlVh~~~v~~h 144 (221)
...+|.=+|+|. ++++..|.+.|.. .+|...|.+ +.++.+.+.|.+.. ..+ +.. .-...|+|..+
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~-~~V~~~dr~~~~~~~a~~~G~~~~~~~~----~~~~~~~~aDvVila----- 101 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFK-GKIYGYDINPESISKAVDLGIIDEGTTS----IAKVEDFSPDFVMLS----- 101 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCC-SEEEEECSCHHHHHHHHHTTSCSEEESC----TTGGGGGCCSEEEEC-----
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCC-CEEEEEECCHHHHHHHHHCCCcchhcCC----HHHHhhccCCEEEEe-----
Confidence 357888899985 3577888888751 135666665 46777888877532 222 111 12456877654
Q ss_pred ccc-cHHHHHHHhhhhccCCeEEEEEcC--hhhHHHHHHHHHh
Q 027609 145 IKK-SLKAVVAEVDRILRPDGNLILRDD--AETIVEVEDLVKS 184 (221)
Q Consensus 145 ~~~-d~~~vL~EmdRVLRPGG~~ii~d~--~~~~~~i~~i~~~ 184 (221)
.+. ....++.++...|+||..++-... ...++.+++.+..
T Consensus 102 vp~~~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~ 144 (314)
T 3ggo_A 102 SPVRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK 144 (314)
T ss_dssp SCGGGHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG
T ss_pred CCHHHHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC
Confidence 222 456788999999999876653222 2456777776644
No 337
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=69.04 E-value=4 Score=35.43 Aligned_cols=90 Identities=14% Similarity=0.013 Sum_probs=52.9
Q ss_pred CCCeEEeecCcc-hHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceec-----cccccCCC-C----CCccCee
Q 027609 70 FVRNVMDMRAVY-GGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYH-----DWCESFNT-Y----PRTYDLL 136 (221)
Q Consensus 70 ~~r~VLD~GcG~-G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~-----d~~e~f~~-y----p~sFDlV 136 (221)
...+||-.|||. |.+++.|++ .|+. |+.++.+ +.++.+.+-|...++. ++.+.+.. . .+.||+|
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~---Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~v 244 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAF---VVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVT 244 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCE---EEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEE
Confidence 367899999875 666667665 4654 3444443 4677777776532221 11000000 1 1457877
Q ss_pred eeccccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 137 HADHLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 137 h~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
.-.. . ....+.+.-+.|||||.+++-
T Consensus 245 id~~-----g--~~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 245 IDCS-----G--NEKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp EECS-----C--CHHHHHHHHHHSCTTCEEEEC
T ss_pred EECC-----C--CHHHHHHHHHHHhcCCEEEEE
Confidence 6431 1 134677888999999999875
No 338
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=68.91 E-value=1.9 Score=37.11 Aligned_cols=88 Identities=14% Similarity=0.238 Sum_probs=51.5
Q ss_pred CCCeEEeecC--cchHHHHHHhh-CCCeEEEeccCCCC-CCHHHHH-HcCccceeccccc--cCC----C-CCCccCeee
Q 027609 70 FVRNVMDMRA--VYGGFAAALKD-LKVWVMNVVPIESP-DTLPIIY-ERGLFGLYHDWCE--SFN----T-YPRTYDLLH 137 (221)
Q Consensus 70 ~~r~VLD~Gc--G~G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~-eRGl~~~~~d~~e--~f~----~-yp~sFDlVh 137 (221)
...+||-.|| |.|.+++.++. .|.. |+.++.+ +.++.+. +-|....+ |..+ .+. . .++.+|+|.
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~---V~~~~~~~~~~~~~~~~~g~~~~~-d~~~~~~~~~~~~~~~~~~~d~vi 230 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCY---VVGSAGSKEKVDLLKTKFGFDDAF-NYKEESDLTAALKRCFPNGIDIYF 230 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESSHHHHHHHHHTSCCSEEE-ETTSCSCSHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHHHHHHHHHHcCCceEE-ecCCHHHHHHHHHHHhCCCCcEEE
Confidence 4678999998 56777776655 4654 3444443 3566665 44532121 2111 110 0 124578776
Q ss_pred eccccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 138 ADHLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 138 ~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
.+. - ...+.+.-+.|||||.+++-
T Consensus 231 ~~~-----g---~~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 231 ENV-----G---GKMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp ESS-----C---HHHHHHHHTTEEEEEEEEEC
T ss_pred ECC-----C---HHHHHHHHHHHhcCCEEEEE
Confidence 541 1 24678888999999999874
No 339
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=68.61 E-value=4.6 Score=35.33 Aligned_cols=91 Identities=8% Similarity=-0.071 Sum_probs=53.1
Q ss_pred CCCeEEeecCcc-hHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceec------cccccCCCC-CCccCeeeec
Q 027609 70 FVRNVMDMRAVY-GGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYH------DWCESFNTY-PRTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~GcG~-G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~------d~~e~f~~y-p~sFDlVh~~ 139 (221)
...+||=.|||. |.++..|++ .|+. .|+.++.+ +.++.+.+.|...++. ++.+.+... ++.||+|.-.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~--~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~ 272 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGAS--RIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDC 272 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCS--EEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEEC
Confidence 367899999875 666666665 3652 23445543 4778888777532221 111111001 1357877532
Q ss_pred cccccccccHHHHHHHhhhhccCC-eEEEEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPD-GNLILR 169 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPG-G~~ii~ 169 (221)
.- . ...+.+.-+.|||| |.+++-
T Consensus 273 -----~G-~-~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 273 -----AG-T-AQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp -----SC-C-HHHHHHHHHTBCTTTCEEEEC
T ss_pred -----CC-C-HHHHHHHHHHhhcCCCEEEEE
Confidence 11 1 35678888999999 999864
No 340
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=68.56 E-value=2.8 Score=36.30 Aligned_cols=89 Identities=11% Similarity=0.037 Sum_probs=54.1
Q ss_pred CCCeEEeecCcc-hHHHHHHhh-C--CCeEEEeccCCCC-CCHHHHHHcCccceec-----cccccCCCCCCccCeeeec
Q 027609 70 FVRNVMDMRAVY-GGFAAALKD-L--KVWVMNVVPIESP-DTLPIIYERGLFGLYH-----DWCESFNTYPRTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~GcG~-G~faa~L~~-~--~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~-----d~~e~f~~yp~sFDlVh~~ 139 (221)
...+||-.|||. |.++..|++ . |+. |+.++.+ +.++.+.+.|...++. ++.+.+. -.+.||+|.-.
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~---Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~-~g~g~D~vid~ 245 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNIT---IVGISRSKKHRDFALELGADYVSEMKDAESLINKLT-DGLGASIAIDL 245 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCE---EEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHH-TTCCEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCE---EEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhh-cCCCccEEEEC
Confidence 578999999974 556666655 3 543 4555544 4677777766432221 1111111 12468887653
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
- . -...+.+.-++|||||.+++-
T Consensus 246 ~-----g--~~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 246 V-----G--TEETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp S-----C--CHHHHHHHHHHEEEEEEEEEC
T ss_pred C-----C--ChHHHHHHHHHhhcCCEEEEe
Confidence 1 1 124678888999999999875
No 341
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=67.57 E-value=3.8 Score=35.15 Aligned_cols=89 Identities=17% Similarity=0.197 Sum_probs=52.3
Q ss_pred CCCeEEeecC--cchHHHHHHhh-CCCeEEEeccCCCC-CCHHHH-HHcCccceec----cccccCCC-CCCccCeeeec
Q 027609 70 FVRNVMDMRA--VYGGFAAALKD-LKVWVMNVVPIESP-DTLPII-YERGLFGLYH----DWCESFNT-YPRTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~Gc--G~G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a-~eRGl~~~~~----d~~e~f~~-yp~sFDlVh~~ 139 (221)
...+||-.|| |.|..++.++. .|+. |+.++.+ +.++.+ .+-|...++. ++.+.+.. .++.||+|..+
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~---Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 225 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCR---VVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDN 225 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEEC
Confidence 4789999998 56777776655 4664 3444443 356666 5555422221 11110000 13468887653
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
. - ...+.+.-+.|||||.+++-
T Consensus 226 ~-----g---~~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 226 V-----G---GEILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp S-----C---HHHHHHHHTTEEEEEEEEEC
T ss_pred C-----C---cchHHHHHHHHhhCCEEEEE
Confidence 1 1 24678888999999999875
No 342
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=67.13 E-value=4.3 Score=36.58 Aligned_cols=42 Identities=14% Similarity=0.146 Sum_probs=30.1
Q ss_pred chhhhhhhHHHHHhhhhhcccCCCC----CCCeEEeecCcchHHHHHHhhC
Q 027609 45 FTADYQHWKNVVSKSYLNGMGINWS----FVRNVMDMRAVYGGFAAALKDL 91 (221)
Q Consensus 45 f~~d~~~W~~~v~~~Y~~~L~i~~~----~~r~VLD~GcG~G~faa~L~~~ 91 (221)
|-.|...=.+.|+. . ++... ...+||++|.|.|.++..|+++
T Consensus 34 FL~d~~i~~~Iv~~--~---~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~ 79 (353)
T 1i4w_A 34 YLWNPTVYNKIFDK--L---DLTKTYKHPEELKVLDLYPGVGIQSAIFYNK 79 (353)
T ss_dssp CBCCHHHHHHHHHH--H---CGGGTCCCTTTCEEEEESCTTCHHHHHHHHH
T ss_pred ccCCHHHHHHHHHh--c---cCCcccCcCCCCEEEEECCCCCHHHHHHHhh
Confidence 66676665666643 2 23322 4678999999999999999975
No 343
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=66.55 E-value=3.1 Score=36.01 Aligned_cols=53 Identities=13% Similarity=0.119 Sum_probs=36.7
Q ss_pred C-CccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEEcCh-----hhHHHHHHHHHhc
Q 027609 130 P-RTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDA-----ETIVEVEDLVKSL 185 (221)
Q Consensus 130 p-~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~-----~~~~~i~~i~~~l 185 (221)
| .+||+||... .+|. .-..++..+...|+|||++++.|-. .....+++++..-
T Consensus 179 ~~~~~dlv~ID~--D~Y~-~t~~~le~~~p~l~~GGvIv~DD~~~~~w~G~~~A~~ef~~~~ 237 (257)
T 3tos_A 179 PQTVIALAYFDL--DLYE-PTKAVLEAIRPYLTKGSIVAFDELDNPKWPGENIAMRKVLGLD 237 (257)
T ss_dssp TTCCEEEEEECC--CCHH-HHHHHHHHHGGGEEEEEEEEESSTTCTTCTHHHHHHHHHTCTT
T ss_pred CCCceEEEEEcC--cccc-hHHHHHHHHHHHhCCCcEEEEcCCCCCCChHHHHHHHHHHhhC
Confidence 5 5799999985 2354 4456777788999999999999852 2344455554433
No 344
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=65.67 E-value=10 Score=36.29 Aligned_cols=55 Identities=20% Similarity=0.257 Sum_probs=34.7
Q ss_pred CccCeeeeccccccccccH----HHHHHHhhhhccCCeEEEEEcChhhHHHHHHHHHhcCCeEE
Q 027609 131 RTYDLLHADHLFSTIKKSL----KAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 131 ~sFDlVh~~~v~~h~~~d~----~~vL~EmdRVLRPGG~~ii~d~~~~~~~i~~i~~~l~W~~~ 190 (221)
..||.+.... |+.-. || ..++.+|.|++||||.+.--... ..+++-+..-...+.
T Consensus 170 ~~~da~flD~-f~p~~-np~~w~~~~~~~l~~~~~~g~~~~t~~~~---~~vr~~l~~aGf~~~ 228 (689)
T 3pvc_A 170 NQVDAWFLDG-FAPAK-NPDMWNEQLFNAMARMTRPGGTFSTFTAA---GFVRRGLQQAGFNVT 228 (689)
T ss_dssp TCEEEEEECS-SCC---CCTTCSHHHHHHHHHHEEEEEEEEESCCC---HHHHHHHHHTTCEEE
T ss_pred CceeEEEECC-CCCCC-ChhhhhHHHHHHHHHHhCCCCEEEeccCc---HHHHHHHHhCCeEEE
Confidence 5678877653 43111 22 68999999999999998765544 344444555555543
No 345
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=64.51 E-value=7.5 Score=36.97 Aligned_cols=55 Identities=20% Similarity=0.279 Sum_probs=35.7
Q ss_pred CccCeeeeccccccccccH----HHHHHHhhhhccCCeEEEEEcChhhHHHHHHHHHhcCCeEE
Q 027609 131 RTYDLLHADHLFSTIKKSL----KAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 131 ~sFDlVh~~~v~~h~~~d~----~~vL~EmdRVLRPGG~~ii~d~~~~~~~i~~i~~~l~W~~~ 190 (221)
..||.+.... |+.-. || ..++.+|.|++||||.+.--... ..+++-+..-...+.
T Consensus 178 ~~~d~~~~D~-f~p~~-np~~w~~~~~~~l~~~~~~g~~~~t~~~~---~~vr~~L~~aGf~v~ 236 (676)
T 3ps9_A 178 QKVDAWFLDG-FAPAK-NPDMWTQNLFNAMARLARPGGTLATFTSA---GFVRRGLQDAGFTMQ 236 (676)
T ss_dssp TCEEEEEECC-SCGGG-CGGGSCHHHHHHHHHHEEEEEEEEESCCC---HHHHHHHHHHTCEEE
T ss_pred CcccEEEECC-CCCcC-ChhhhhHHHHHHHHHHhCCCCEEEeccCc---HHHHHHHHhCCeEEE
Confidence 5688887753 54222 22 58899999999999998765544 344444454555443
No 346
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=64.17 E-value=11 Score=31.90 Aligned_cols=91 Identities=16% Similarity=0.069 Sum_probs=54.6
Q ss_pred CCCCCCCeEEeecC--cchHHHHHHhhC-CCeEEEeccCCC-CCCHHHHHHcCcccee--ccccccCCCC-CCccCeeee
Q 027609 66 INWSFVRNVMDMRA--VYGGFAAALKDL-KVWVMNVVPIES-PDTLPIIYERGLFGLY--HDWCESFNTY-PRTYDLLHA 138 (221)
Q Consensus 66 i~~~~~r~VLD~Gc--G~G~faa~L~~~-~v~vmnv~~~d~-~~~l~~a~eRGl~~~~--~d~~e~f~~y-p~sFDlVh~ 138 (221)
+..+..+ ||=.|| |.|.++..|++. |+.+ +.++. ++.++.+.+-|...++ ++..+ .... .+.+|+|.-
T Consensus 143 ~~~~~g~-VlV~Ga~G~vG~~aiqla~~~Ga~V---i~~~~~~~~~~~~~~lGa~~vi~~~~~~~-~~~~~~~~~d~v~d 217 (324)
T 3nx4_A 143 IRPQDGE-VVVTGASGGVGSTAVALLHKLGYQV---AAVSGRESTHGYLKSLGANRILSRDEFAE-SRPLEKQLWAGAID 217 (324)
T ss_dssp CCGGGCC-EEESSTTSHHHHHHHHHHHHTTCCE---EEEESCGGGHHHHHHHTCSEEEEGGGSSC-CCSSCCCCEEEEEE
T ss_pred cCCCCCe-EEEECCCcHHHHHHHHHHHHcCCEE---EEEeCCHHHHHHHHhcCCCEEEecCCHHH-HHhhcCCCccEEEE
Confidence 4443345 999997 567777777664 6654 44443 3467888777643222 22111 1112 256787653
Q ss_pred ccccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 139 DHLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 139 ~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
. .- ...+.+.-+.|||||.+++-
T Consensus 218 ~-----~g---~~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 218 T-----VG---DKVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp S-----SC---HHHHHHHHHTEEEEEEEEEC
T ss_pred C-----CC---cHHHHHHHHHHhcCCEEEEE
Confidence 2 12 23788899999999999876
No 347
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=63.40 E-value=7 Score=34.27 Aligned_cols=91 Identities=12% Similarity=-0.019 Sum_probs=53.9
Q ss_pred CCCeEEeecCcc-hHHHHHHhhC-CCeEEEeccCCC-CCCHHHHHHcCccceec------cccccCCC-CCCccCeeeec
Q 027609 70 FVRNVMDMRAVY-GGFAAALKDL-KVWVMNVVPIES-PDTLPIIYERGLFGLYH------DWCESFNT-YPRTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~GcG~-G~faa~L~~~-~v~vmnv~~~d~-~~~l~~a~eRGl~~~~~------d~~e~f~~-yp~sFDlVh~~ 139 (221)
...+||=+|||. |.++..|++. |+. .|+.++. ++-++.+.+-|...++. ++.+.+.. .++.||+|.-.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~--~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~ 270 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGAS--RIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFEC 270 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCS--CEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEEC
Confidence 467899999974 6666666654 652 2355564 35778888777533221 11110000 12468887643
Q ss_pred cccccccccHHHHHHHhhhhccCC-eEEEEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPD-GNLILR 169 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPG-G~~ii~ 169 (221)
.- . ...+.+.-+.|||| |.+++-
T Consensus 271 -----~g-~-~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 271 -----IG-N-VSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp -----SC-C-HHHHHHHHHTBCTTTCEEEEC
T ss_pred -----CC-C-HHHHHHHHHHhhccCCEEEEE
Confidence 11 1 35678888999997 998875
No 348
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=63.06 E-value=1.4 Score=38.76 Aligned_cols=89 Identities=17% Similarity=0.109 Sum_probs=52.7
Q ss_pred CCCeEEeecCcc-hHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceec----cccccCCC-CC-CccCeeeecc
Q 027609 70 FVRNVMDMRAVY-GGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYH----DWCESFNT-YP-RTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~GcG~-G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~----d~~e~f~~-yp-~sFDlVh~~~ 140 (221)
...+||=.|||. |.+++.+++ .|+. |+.++.+ +.++.+.+.|...++. ++.+.+.. .+ +.||+|.-..
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~---Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~ 265 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAE---VIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIA 265 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCE---EEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEET
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCE---EEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECC
Confidence 467899999876 556666655 3664 3445544 4677777777533322 11111100 12 4788876431
Q ss_pred ccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 141 LFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
- ...+.+.-+.|||||.+++-
T Consensus 266 g--------~~~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 266 G--------GAGLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp T--------SSCHHHHHHHEEEEEEEEEE
T ss_pred C--------hHHHHHHHHHhhcCCEEEEE
Confidence 1 13456677899999999876
No 349
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=62.28 E-value=5.1 Score=34.67 Aligned_cols=90 Identities=14% Similarity=0.066 Sum_probs=52.8
Q ss_pred CCCCeEEeecC--cchHHHHHHhh-CCCeEEEeccCCC-CCCHHHHHHcCccceecccc--ccCC----C-CCCccCeee
Q 027609 69 SFVRNVMDMRA--VYGGFAAALKD-LKVWVMNVVPIES-PDTLPIIYERGLFGLYHDWC--ESFN----T-YPRTYDLLH 137 (221)
Q Consensus 69 ~~~r~VLD~Gc--G~G~faa~L~~-~~v~vmnv~~~d~-~~~l~~a~eRGl~~~~~d~~--e~f~----~-yp~sFDlVh 137 (221)
....+||-.|| |.|.+++.++. .|..+ +.++. ++.++.+.+.|.... .|.. +.+. . ..+.+|+|.
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V---~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~~~~~~~~~D~vi 243 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRV---LGIDGGEGKEELFRSIGGEVF-IDFTKEKDIVGAVLKATDGGAHGVI 243 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEE---EEEECSTTHHHHHHHTTCCEE-EETTTCSCHHHHHHHHHTSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCcE---EEEcCCHHHHHHHHHcCCceE-EecCccHhHHHHHHHHhCCCCCEEE
Confidence 34689999999 56777766655 56543 44443 345677776654211 1221 0010 0 012577766
Q ss_pred eccccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 138 ADHLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 138 ~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
.+. - ....+.+.-+.|||||.+++-
T Consensus 244 ~~~-----g--~~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 244 NVS-----V--SEAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp ECS-----S--CHHHHHHHTTSEEEEEEEEEC
T ss_pred ECC-----C--cHHHHHHHHHHHhcCCEEEEE
Confidence 542 1 135788889999999999875
No 350
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=61.67 E-value=19 Score=31.11 Aligned_cols=92 Identities=12% Similarity=0.057 Sum_probs=51.2
Q ss_pred CCCeEEeecC--cchHHHHHHhhC-CCeEEEeccCCCC--CCHHHHHHcCccceec--c-ccccCCC-CC--CccCeeee
Q 027609 70 FVRNVMDMRA--VYGGFAAALKDL-KVWVMNVVPIESP--DTLPIIYERGLFGLYH--D-WCESFNT-YP--RTYDLLHA 138 (221)
Q Consensus 70 ~~r~VLD~Gc--G~G~faa~L~~~-~v~vmnv~~~d~~--~~l~~a~eRGl~~~~~--d-~~e~f~~-yp--~sFDlVh~ 138 (221)
...+||=.|| |.|.++..|++. |+.++-++..+.. +.++.+.+-|...++. + +.+.+.. .. ..+|+|.-
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvid 246 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALN 246 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEEEE
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEEEE
Confidence 4678999997 567777777764 6655434333221 1356677766432221 1 1111111 12 14787764
Q ss_pred ccccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 139 DHLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 139 ~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
. .- . ..+.+.-++|||||.+++-
T Consensus 247 ~-----~g-~--~~~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 247 C-----VG-G--KSSTELLRQLARGGTMVTY 269 (357)
T ss_dssp S-----SC-H--HHHHHHHTTSCTTCEEEEC
T ss_pred C-----CC-c--HHHHHHHHhhCCCCEEEEE
Confidence 3 11 1 2234677999999999875
No 351
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=60.20 E-value=7.5 Score=33.88 Aligned_cols=88 Identities=13% Similarity=0.148 Sum_probs=50.5
Q ss_pred CCCeEEeecC--cchHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceeccccc-----cCCC-CC-CccCeeee
Q 027609 70 FVRNVMDMRA--VYGGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYHDWCE-----SFNT-YP-RTYDLLHA 138 (221)
Q Consensus 70 ~~r~VLD~Gc--G~G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~d~~e-----~f~~-yp-~sFDlVh~ 138 (221)
...+||-.|| |.|.+++.++. .|+.+ +.++.+ +.++.+.+.|....+ |..+ .+.. .. +.+|+|..
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~V---i~~~~~~~~~~~~~~~ga~~~~-d~~~~~~~~~~~~~~~~~~~D~vi~ 245 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKI---LGTAGTEEGQKIVLQNGAHEVF-NHREVNYIDKIKKYVGEKGIDIIIE 245 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEE---EEEESSHHHHHHHHHTTCSEEE-ETTSTTHHHHHHHHHCTTCEEEEEE
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEE---EEEeCChhHHHHHHHcCCCEEE-eCCCchHHHHHHHHcCCCCcEEEEE
Confidence 4678999997 55666666554 46543 444443 356666666542221 1111 0000 12 36887765
Q ss_pred ccccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 139 DHLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 139 ~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
+. ....+.+.-+.|||||.+++-
T Consensus 246 ~~--------G~~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 246 ML--------ANVNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp SC--------HHHHHHHHHHHEEEEEEEEEC
T ss_pred CC--------ChHHHHHHHHhccCCCEEEEE
Confidence 41 123567788999999999874
No 352
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=59.82 E-value=12 Score=32.57 Aligned_cols=88 Identities=17% Similarity=0.053 Sum_probs=50.8
Q ss_pred CeEEeecCcc-hHHH-HHHh-hC-CCeEEEeccCCCC-C---CHHHHHHcCccce-ec--cccccCCCCCCccCeeeecc
Q 027609 72 RNVMDMRAVY-GGFA-AALK-DL-KVWVMNVVPIESP-D---TLPIIYERGLFGL-YH--DWCESFNTYPRTYDLLHADH 140 (221)
Q Consensus 72 r~VLD~GcG~-G~fa-a~L~-~~-~v~vmnv~~~d~~-~---~l~~a~eRGl~~~-~~--d~~e~f~~yp~sFDlVh~~~ 140 (221)
.+||=.|||. |.++ ..|+ +. |+. +|+.++.+ + .++.+.+.|...+ +. ++.+ +....+.||+|.-.
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~--~Vi~~~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~-i~~~~gg~Dvvid~- 249 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYE--NLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVED-VPDVYEQMDFIYEA- 249 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCC--EEEEEECCCSSCHHHHHHHHTTCEEEETTTSCGGG-HHHHSCCEEEEEEC-
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCc--EEEEEeCCcccHHHHHHHHHcCCcccCCCccCHHH-HHHhCCCCCEEEEC-
Confidence 7899999864 5566 6776 43 654 13444443 3 5788877765322 11 1111 10001257776532
Q ss_pred ccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 141 LFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
.- . ...+.+.-++|||||.+++-
T Consensus 250 ----~g-~-~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 250 ----TG-F-PKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp ----SC-C-HHHHHHHHHHEEEEEEEEEC
T ss_pred ----CC-C-hHHHHHHHHHHhcCCEEEEE
Confidence 11 1 24678888999999999875
No 353
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=59.78 E-value=18 Score=32.00 Aligned_cols=92 Identities=13% Similarity=0.049 Sum_probs=51.7
Q ss_pred CCCeEEeecCcc-hHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceec----cccccCCC-CC-CccCeeeecc
Q 027609 70 FVRNVMDMRAVY-GGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYH----DWCESFNT-YP-RTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~GcG~-G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~----d~~e~f~~-yp-~sFDlVh~~~ 140 (221)
...+||=.|||. |.++..|++ .|+. .|+.++.+ +-++.+.+-|...++. |+.+.+.. .. +.||+|.-.
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga~--~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~- 289 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGAS--KVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEA- 289 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCS--EEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEEC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCC--EEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEEC-
Confidence 467888889865 556666665 3652 23555544 4677888777533321 11111100 12 468887643
Q ss_pred ccccccccHHHHHHHhhhhc----cCCeEEEEE
Q 027609 141 LFSTIKKSLKAVVAEVDRIL----RPDGNLILR 169 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdRVL----RPGG~~ii~ 169 (221)
.- .+...+..+.+.| ||||.+++-
T Consensus 290 ----~g-~~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 290 ----TG-VPQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp ----SS-CHHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred ----CC-CcHHHHHHHHHHHHhccCCCcEEEEe
Confidence 11 2333445555555 999999886
No 354
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=59.63 E-value=6.2 Score=34.17 Aligned_cols=89 Identities=13% Similarity=0.160 Sum_probs=52.7
Q ss_pred CCCeEEeecC--cchHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceec---cccccCCC-CC-CccCeeeecc
Q 027609 70 FVRNVMDMRA--VYGGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYH---DWCESFNT-YP-RTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~Gc--G~G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~---d~~e~f~~-yp-~sFDlVh~~~ 140 (221)
...+||=.|| |.|.+++.+++ .|+.+ +.++.+ +.++.+.+-|...++. ++.+.+.. .. +.||+|....
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~V---i~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~ 235 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKV---IAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPI 235 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEE---EEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEE---EEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECC
Confidence 4788999998 55777776655 46644 444443 4677777766432221 11111111 23 4788887531
Q ss_pred ccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 141 LFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
- ...+.+.-+.|||||.+++-
T Consensus 236 g--------~~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 236 G--------GPAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp C----------CHHHHHHTEEEEEEEEEC
T ss_pred c--------hhHHHHHHHhhcCCCEEEEE
Confidence 1 12567778999999999875
No 355
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=59.52 E-value=15 Score=31.17 Aligned_cols=86 Identities=13% Similarity=0.129 Sum_probs=50.5
Q ss_pred eEEeecC--cchHHHHHHhhC-CCeEEEeccCCC-CCCHHHHHHcCcccee--ccc-cccCCCC-CCccCeeeecccccc
Q 027609 73 NVMDMRA--VYGGFAAALKDL-KVWVMNVVPIES-PDTLPIIYERGLFGLY--HDW-CESFNTY-PRTYDLLHADHLFST 144 (221)
Q Consensus 73 ~VLD~Gc--G~G~faa~L~~~-~v~vmnv~~~d~-~~~l~~a~eRGl~~~~--~d~-~e~f~~y-p~sFDlVh~~~v~~h 144 (221)
+||=.|| |.|.++..+++. |+.+ +.++. ++-++.+.+-|...++ .+. .+..... .+.+|+|.-.
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~v---i~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~----- 224 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDV---VASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDP----- 224 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCE---EEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEES-----
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEE---EEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEEC-----
Confidence 6999997 566677766654 6544 33333 3467777776643222 111 1111112 2467876543
Q ss_pred ccccHHHHHHHhhhhccCCeEEEEE
Q 027609 145 IKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 145 ~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
.- . ..+.+.-+.|||||.+++-
T Consensus 225 ~g-~--~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 225 VG-G--KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp CC-T--HHHHHHHTTEEEEEEEEEC
T ss_pred Cc-H--HHHHHHHHhhcCCCEEEEE
Confidence 12 2 3678888999999999875
No 356
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=59.11 E-value=11 Score=32.87 Aligned_cols=90 Identities=13% Similarity=0.172 Sum_probs=55.2
Q ss_pred CCCeEEeec-Cc-chHHHHHHhhC--CCeEEEeccCCCC-CCHHHHHHcCccceec---cccccCCCC-CCccCeeeecc
Q 027609 70 FVRNVMDMR-AV-YGGFAAALKDL--KVWVMNVVPIESP-DTLPIIYERGLFGLYH---DWCESFNTY-PRTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~G-cG-~G~faa~L~~~--~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~---d~~e~f~~y-p~sFDlVh~~~ 140 (221)
...+||=.| || .|.++..|++. +.. |+.++.+ +.++.+.+-|...++. ++.+.+... .+.+|+|.-.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~---Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~- 246 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLT---VIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFST- 246 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSE---EEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEEC-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCE---EEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEEC-
Confidence 577899888 44 47777788764 554 4555554 4677787776432221 111111112 2578877643
Q ss_pred ccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 141 LFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
. .-...+.+.-+.|||||.+++-
T Consensus 247 ----~--g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 247 ----T--HTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp ----S--CHHHHHHHHHHHSCTTCEEEEC
T ss_pred ----C--CchhhHHHHHHHhcCCCEEEEE
Confidence 1 1235778888999999999876
No 357
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=58.01 E-value=9.2 Score=33.02 Aligned_cols=90 Identities=13% Similarity=0.013 Sum_probs=52.2
Q ss_pred CCCeEEeecCcc-hHHHHHHhh-CCC-eEEEeccCCCC-CCHHHHHHcCccceec----cccccCCC-CC-CccCeeeec
Q 027609 70 FVRNVMDMRAVY-GGFAAALKD-LKV-WVMNVVPIESP-DTLPIIYERGLFGLYH----DWCESFNT-YP-RTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~GcG~-G~faa~L~~-~~v-~vmnv~~~d~~-~~l~~a~eRGl~~~~~----d~~e~f~~-yp-~sFDlVh~~ 139 (221)
...+||-.|||. |.+++.+++ .|+ .+ +.++.+ +.++.+.+.|...++. ++.+.+.. .. +.||+|.-.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~V---i~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~ 243 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPV---IVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEF 243 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSE---EEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEE---EEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEEC
Confidence 577899999964 556666655 465 44 344433 4667777766432221 11111100 12 468887643
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
. . ....+.+.-+.|||||.+++-
T Consensus 244 ~-----g--~~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 244 S-----G--APKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp S-----C--CHHHHHHHHHHEEEEEEEEEC
T ss_pred C-----C--CHHHHHHHHHHHhcCCEEEEE
Confidence 1 1 135677888999999999875
No 358
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=56.94 E-value=13 Score=31.55 Aligned_cols=86 Identities=14% Similarity=0.074 Sum_probs=48.8
Q ss_pred eEEeecC--cchHHHHHHhh-CCCeEEEeccCCC-CCCHHHHHHcCcccee--ccc-cccCCCCC-CccCeeeecccccc
Q 027609 73 NVMDMRA--VYGGFAAALKD-LKVWVMNVVPIES-PDTLPIIYERGLFGLY--HDW-CESFNTYP-RTYDLLHADHLFST 144 (221)
Q Consensus 73 ~VLD~Gc--G~G~faa~L~~-~~v~vmnv~~~d~-~~~l~~a~eRGl~~~~--~d~-~e~f~~yp-~sFDlVh~~~v~~h 144 (221)
+||=.|| |.|.++..+++ .|+.+ +.++. ++.++.+.+-|...++ .+. .+...... +.||+|.-.-
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~v---i~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~---- 224 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTV---EASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPV---- 224 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCE---EEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECS----
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEE---EEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECC----
Confidence 6999998 56777777765 46544 33333 3567777776642222 111 01111122 4678765431
Q ss_pred ccccHHHHHHHhhhhccCCeEEEEE
Q 027609 145 IKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 145 ~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
- . ..+.+.-+.|||||.+++-
T Consensus 225 -g-~--~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 225 -G-G--RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp -T-T--TTHHHHHHTEEEEEEEEEC
T ss_pred -c-H--HHHHHHHHhhccCCEEEEE
Confidence 1 1 2466777899999999875
No 359
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=56.17 E-value=20 Score=32.11 Aligned_cols=90 Identities=13% Similarity=0.022 Sum_probs=51.1
Q ss_pred CCCeEEeecC--cchHHHHHHhh-CCCeEEEeccCCCCCCHHHHHHcCccceeccccccCCC------------------
Q 027609 70 FVRNVMDMRA--VYGGFAAALKD-LKVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNT------------------ 128 (221)
Q Consensus 70 ~~r~VLD~Gc--G~G~faa~L~~-~~v~vmnv~~~d~~~~l~~a~eRGl~~~~~d~~e~f~~------------------ 128 (221)
...+||=.|| |.|.+++.+++ .|+.++-++ ..++.++.+.+-|...++..-.+.+..
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~--~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVV--SSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAK 297 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE--SSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEe--CCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHH
Confidence 4788999997 45666666655 466553332 223466777776643222100000100
Q ss_pred -----CCCccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 129 -----YPRTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 129 -----yp~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
..+.+|+|.-.. - ...+.+.-+.|||||.+++-
T Consensus 298 ~v~~~~g~g~Dvvid~~-----G---~~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 298 LVVEKAGREPDIVFEHT-----G---RVTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHSSCCSEEEECS-----C---HHHHHHHHHHSCTTCEEEES
T ss_pred HHHHHhCCCceEEEECC-----C---chHHHHHHHHHhcCCEEEEE
Confidence 034678776431 1 13567778899999999875
No 360
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=55.68 E-value=5.8 Score=34.24 Aligned_cols=89 Identities=16% Similarity=0.029 Sum_probs=51.5
Q ss_pred CCCeEEeecCc-chHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceecccc-ccCC----CCCCccCeeeeccc
Q 027609 70 FVRNVMDMRAV-YGGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYHDWC-ESFN----TYPRTYDLLHADHL 141 (221)
Q Consensus 70 ~~r~VLD~GcG-~G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~d~~-e~f~----~yp~sFDlVh~~~v 141 (221)
...+||-.|+| .|.+++.+++ .|+. |+.++.+ +.++.+.+-|...++ |.. +.+. ...+.||+|.-..
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~---Vi~~~~~~~~~~~~~~lGa~~~~-d~~~~~~~~~~~~~~~~~d~vid~~- 238 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLN---VVAVDIGDEKLELAKELGADLVV-NPLKEDAAKFMKEKVGGVHAAVVTA- 238 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCE---EEEECSCHHHHHHHHHTTCSEEE-CTTTSCHHHHHHHHHSSEEEEEESS-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCE---EEEEeCCHHHHHHHHHCCCCEEe-cCCCccHHHHHHHHhCCCCEEEECC-
Confidence 46789999996 4666666655 4653 4555544 466777766643222 111 0000 0003577765431
Q ss_pred cccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 142 FSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 142 ~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
- . ...+.+.-+.|||||.+++-
T Consensus 239 ----g-~-~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 239 ----V-S-KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp ----C-C-HHHHHHHHHHEEEEEEEEEC
T ss_pred ----C-C-HHHHHHHHHHhhcCCEEEEe
Confidence 1 1 25677888999999999875
No 361
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=55.15 E-value=8.4 Score=32.51 Aligned_cols=84 Identities=18% Similarity=0.183 Sum_probs=50.4
Q ss_pred CCCeEEeecC--cchHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceec-----cccccCCCCCCccCeeeecc
Q 027609 70 FVRNVMDMRA--VYGGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYH-----DWCESFNTYPRTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~Gc--G~G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~-----d~~e~f~~yp~sFDlVh~~~ 140 (221)
...+||-.|| |.|.+++.+++ .|+.+ +.++.+ +.++.+.+-|...++. ++.+.+ +.||+|.. .
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~V---i~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~----~~~d~vid-~ 196 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRV---LAAASRPEKLALPLALGAEEAATYAEVPERAKAW----GGLDLVLE-V 196 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEE---EEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHT----TSEEEEEE-C
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEE---EEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHh----cCceEEEE-C
Confidence 4679999998 55667776655 46543 444442 4566676666422211 111111 56777664 1
Q ss_pred ccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 141 LFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
. . ..+.+.-+.|||||.++.-
T Consensus 197 -----g-~--~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 197 -----R-G--KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp -----S-C--TTHHHHHTTEEEEEEEEEC
T ss_pred -----C-H--HHHHHHHHhhccCCEEEEE
Confidence 1 1 3567778999999998864
No 362
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=54.29 E-value=7 Score=33.49 Aligned_cols=90 Identities=18% Similarity=0.057 Sum_probs=51.7
Q ss_pred CCCCeEEeecC--cchHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceec----cccccCC--CCCCccCeeee
Q 027609 69 SFVRNVMDMRA--VYGGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYH----DWCESFN--TYPRTYDLLHA 138 (221)
Q Consensus 69 ~~~r~VLD~Gc--G~G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~----d~~e~f~--~yp~sFDlVh~ 138 (221)
....+||=.|| |.|.+++.+++ .|+.+ +.++.+ +.++.+.+-|...++. ++.+.+. +-.+.||+|..
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~V---i~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid 223 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHT---IAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFD 223 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEE---EEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEE---EEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEE
Confidence 34788999994 45666666655 46644 444443 4677777766422221 1111000 01256888775
Q ss_pred ccccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 139 DHLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 139 ~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
.. - ...+...-+.|||||.+++-
T Consensus 224 ~~-----g---~~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 224 SV-----G---KDTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp CC-----G---GGGHHHHHHHEEEEEEEEEC
T ss_pred CC-----C---hHHHHHHHHHhccCCEEEEE
Confidence 41 1 13466677899999999875
No 363
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=53.04 E-value=31 Score=30.08 Aligned_cols=91 Identities=12% Similarity=0.091 Sum_probs=53.7
Q ss_pred CCCCeEEeecC--cchHHHHHHhhC-CCeEEEeccCCCCCCHHHHHHcCccceec----cccccCCC-CCCccCeeeecc
Q 027609 69 SFVRNVMDMRA--VYGGFAAALKDL-KVWVMNVVPIESPDTLPIIYERGLFGLYH----DWCESFNT-YPRTYDLLHADH 140 (221)
Q Consensus 69 ~~~r~VLD~Gc--G~G~faa~L~~~-~v~vmnv~~~d~~~~l~~a~eRGl~~~~~----d~~e~f~~-yp~sFDlVh~~~ 140 (221)
....+||=.|+ +.|.++..|++. |+.++.+ ..++-++.+.+-|...++. ++.+.+.. -++.||+|.-.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~---~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~- 238 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIAT---CSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDC- 238 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEE---ECGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEES-
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEE---eCHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEEC-
Confidence 45678999998 378888877664 6655433 2345678888877533321 11111111 13348877642
Q ss_pred ccccccccHHHHHHHhhhhc-cCCeEEEEE
Q 027609 141 LFSTIKKSLKAVVAEVDRIL-RPDGNLILR 169 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdRVL-RPGG~~ii~ 169 (221)
.- . ...+...-+.| ||||.+++-
T Consensus 239 ----~g-~-~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 239 ----IT-N-VESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp ----SC-S-HHHHHHHHHHSCTTCEEEEES
T ss_pred ----CC-c-hHHHHHHHHHhhcCCCEEEEE
Confidence 11 1 24567777888 799999874
No 364
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=51.37 E-value=7 Score=33.43 Aligned_cols=89 Identities=9% Similarity=-0.019 Sum_probs=51.8
Q ss_pred CCCeEEeecC--cchHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHcCccceec----cccccCCC-CC-CccCeeeec
Q 027609 70 FVRNVMDMRA--VYGGFAAALKDL-KVWVMNVVPIESP-DTLPIIYERGLFGLYH----DWCESFNT-YP-RTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~Gc--G~G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~----d~~e~f~~-yp-~sFDlVh~~ 139 (221)
...+||=.|+ |.|.+++.+++. |+.+ +.++.+ +.++.+.+.|...++. ++.+.+.. .. +.+|+|...
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~V---i~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~ 216 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKL---IGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDG 216 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEE---EEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEES
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEE---EEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEEC
Confidence 4788999983 456666666553 6543 444443 4677777766422221 11111000 23 578887754
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
.- ...+.+.-+.|||||.+++-
T Consensus 217 ~g--------~~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 217 VG--------QDTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp SC--------GGGHHHHHTTEEEEEEEEEC
T ss_pred CC--------hHHHHHHHHHhcCCCEEEEE
Confidence 11 13456777899999999886
No 365
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=51.19 E-value=19 Score=32.52 Aligned_cols=90 Identities=17% Similarity=0.134 Sum_probs=52.4
Q ss_pred CCCeEEeecC--cchHHHHHHhh-CCCeEEEeccCCCCCCHHHHHHcCccceeccccccCC-------------------
Q 027609 70 FVRNVMDMRA--VYGGFAAALKD-LKVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFN------------------- 127 (221)
Q Consensus 70 ~~r~VLD~Gc--G~G~faa~L~~-~~v~vmnv~~~d~~~~l~~a~eRGl~~~~~d~~e~f~------------------- 127 (221)
...+||=.|| |.|.++..+++ .|+.++-++ ..++-++.+.+-|...++..-.+.+.
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~--~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~ 305 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAGGANPICVV--SSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKR 305 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE--SSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEE--CCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHH
Confidence 4678999997 45667777665 466553333 22346777777765333211000010
Q ss_pred --C-CC-CccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 128 --T-YP-RTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 128 --~-yp-~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
. .+ +.+|+|.-. .- ...+.+.-++|||||.+++-
T Consensus 306 i~~~t~g~g~Dvvid~-----~G---~~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 306 IRELTGGEDIDIVFEH-----PG---RETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHTSCCEEEEEEC-----SC---HHHHHHHHHHEEEEEEEEES
T ss_pred HHHHhCCCCCcEEEEc-----CC---chhHHHHHHHhhCCcEEEEE
Confidence 0 12 467776542 11 25677788999999999874
No 366
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=50.72 E-value=10 Score=32.40 Aligned_cols=90 Identities=14% Similarity=0.012 Sum_probs=50.8
Q ss_pred CCCeEEeec-Cc-chHHHHHHhh-CCCeEEEeccCCCCCCHHHHHHcCccceecccccc-CCCCCCccCeeeeccccccc
Q 027609 70 FVRNVMDMR-AV-YGGFAAALKD-LKVWVMNVVPIESPDTLPIIYERGLFGLYHDWCES-FNTYPRTYDLLHADHLFSTI 145 (221)
Q Consensus 70 ~~r~VLD~G-cG-~G~faa~L~~-~~v~vmnv~~~d~~~~l~~a~eRGl~~~~~d~~e~-f~~yp~sFDlVh~~~v~~h~ 145 (221)
...+||=.| || .|.++..+++ .|+.++ .++.++-++.+.+-|...++..-.+. +...-+.||+|.-. .
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi---~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~-----~ 223 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVI---TTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDL-----V 223 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEE---EEECHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEES-----S
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEE---EEeccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEEC-----C
Confidence 467899886 44 4666666655 366543 33333347777777754333210010 11011567877643 1
Q ss_pred cccHHHHHHHhhhhccCCeEEEEEc
Q 027609 146 KKSLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 146 ~~d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
- ...+.+.-+.|||||.++.--
T Consensus 224 g---~~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 224 G---GDVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp C---HHHHHHHGGGEEEEEEEEECC
T ss_pred C---cHHHHHHHHhccCCCEEEEeC
Confidence 1 223378889999999998764
No 367
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=50.52 E-value=7.4 Score=33.76 Aligned_cols=91 Identities=9% Similarity=-0.056 Sum_probs=50.6
Q ss_pred CCCeEEeecCcc-hHHHHHHhhC-CCeEEEeccCCCC-CCHHHHHHcCccc-eec-------cccccCCC-C-CCccCee
Q 027609 70 FVRNVMDMRAVY-GGFAAALKDL-KVWVMNVVPIESP-DTLPIIYERGLFG-LYH-------DWCESFNT-Y-PRTYDLL 136 (221)
Q Consensus 70 ~~r~VLD~GcG~-G~faa~L~~~-~v~vmnv~~~d~~-~~l~~a~eRGl~~-~~~-------d~~e~f~~-y-p~sFDlV 136 (221)
...+||=.|||. |.++..|++. |+.. |+.++.+ +-++.+.+.+-.- .+. ++.+.+.. . .+.||+|
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~--Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvv 256 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACP--LVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVA 256 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCS--EEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCE--EEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEE
Confidence 366788899876 6666777654 6541 2334433 3566665542100 111 11111100 1 2578887
Q ss_pred eeccccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 137 HADHLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 137 h~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
.-. .- -...+.+.-++|||||.+++-
T Consensus 257 id~-----~g--~~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 257 LEC-----TG--VESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp EEC-----SC--CHHHHHHHHHHSCTTCEEEEC
T ss_pred EEC-----CC--ChHHHHHHHHHhcCCCEEEEE
Confidence 753 11 124677888999999999985
No 368
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=49.16 E-value=6.3 Score=37.10 Aligned_cols=119 Identities=13% Similarity=0.088 Sum_probs=63.1
Q ss_pred CCCCCCeEEeecCcchHHHHHHhhC----CCe--------EEEeccCCCC-CCHHHHHH----cCcc--ceeccccccCC
Q 027609 67 NWSFVRNVMDMRAVYGGFAAALKDL----KVW--------VMNVVPIESP-DTLPIIYE----RGLF--GLYHDWCESFN 127 (221)
Q Consensus 67 ~~~~~r~VLD~GcG~G~faa~L~~~----~v~--------vmnv~~~d~~-~~l~~a~e----RGl~--~~~~d~~e~f~ 127 (221)
.+....+|+|-.||+|+|.....++ ... -.++.+.+.. .+..++.- +|+. .+.+. ..+.
T Consensus 214 ~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~--dtL~ 291 (530)
T 3ufb_A 214 DPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPE--NSLR 291 (530)
T ss_dssp CCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECS--CTTC
T ss_pred ccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCcccccccc--cccc
Confidence 3455678999999999997655432 100 1135666654 35555543 3332 22221 1121
Q ss_pred -----CCC-CccCeeeecccccc---------cc----c-cHH-HHHHHhhhhcc-------CCeEEEEEcChhhH----
Q 027609 128 -----TYP-RTYDLLHADHLFST---------IK----K-SLK-AVVAEVDRILR-------PDGNLILRDDAETI---- 175 (221)
Q Consensus 128 -----~yp-~sFDlVh~~~v~~h---------~~----~-d~~-~vL~EmdRVLR-------PGG~~ii~d~~~~~---- 175 (221)
..+ ..||+|.++==|.- +. . +.. .++.-|-+-|| |||.+.+--++.++
T Consensus 292 ~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~ 371 (530)
T 3ufb_A 292 FPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDG 371 (530)
T ss_dssp SCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHHHCCT
T ss_pred CchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecchhhhccc
Confidence 123 57999998744431 11 0 222 23444556665 79999887666543
Q ss_pred --HHHHHHHHhcCC
Q 027609 176 --VEVEDLVKSLHW 187 (221)
Q Consensus 176 --~~i~~i~~~l~W 187 (221)
.+|.+.+-.-++
T Consensus 372 ~~~~iRk~Lle~~~ 385 (530)
T 3ufb_A 372 ISARIKEELLKNFN 385 (530)
T ss_dssp HHHHHHHHHHHHSE
T ss_pred hHHHHHHHHhhcCE
Confidence 346554433344
No 369
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=49.02 E-value=7.4 Score=33.55 Aligned_cols=88 Identities=13% Similarity=0.041 Sum_probs=51.6
Q ss_pred CCCeEEeecC--cchHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceeccccc-----cCCC-CC-CccCeeee
Q 027609 70 FVRNVMDMRA--VYGGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYHDWCE-----SFNT-YP-RTYDLLHA 138 (221)
Q Consensus 70 ~~r~VLD~Gc--G~G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~d~~e-----~f~~-yp-~sFDlVh~ 138 (221)
...+||-.|+ |.|.+++.++. .|..+ +.++.+ +.++.+.+.|...++ |..+ .+.. .. +.+|+|..
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~V---i~~~~~~~~~~~~~~~ga~~~~-d~~~~~~~~~~~~~~~~~~~d~vi~ 241 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARV---IATAGSEDKLRRAKALGADETV-NYTHPDWPKEVRRLTGGKGADKVVD 241 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEE---EEEESSHHHHHHHHHHTCSEEE-ETTSTTHHHHHHHHTTTTCEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEE---EEEeCCHHHHHHHHhcCCCEEE-cCCcccHHHHHHHHhCCCCceEEEE
Confidence 4688999998 67777777665 46543 444443 356666665532221 2111 0100 12 46888765
Q ss_pred ccccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 139 DHLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 139 ~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
..- ...+.+.-+.|||||.+++-
T Consensus 242 ~~g--------~~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 242 HTG--------ALYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp SSC--------SSSHHHHHHHEEEEEEEEES
T ss_pred CCC--------HHHHHHHHHhhccCCEEEEE
Confidence 421 12456677899999998875
No 370
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=48.69 E-value=13 Score=32.45 Aligned_cols=90 Identities=19% Similarity=0.165 Sum_probs=52.8
Q ss_pred CCCeEEeec--CcchHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceec----cccccCCC-CCCccCeeeecc
Q 027609 70 FVRNVMDMR--AVYGGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYH----DWCESFNT-YPRTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~G--cG~G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~----d~~e~f~~-yp~sFDlVh~~~ 140 (221)
...+||=.| .|.|.+++.+++ .|+. |+.++.+ +.++.+.+.|...++. ++.+.+.. ..+.+|+|....
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~---Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~ 239 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCH---VIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESV 239 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCE---EEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCE---EEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECC
Confidence 467899999 356777777665 4654 3444443 4667777766432221 11111100 124678776431
Q ss_pred ccccccccHHHHHHHhhhhccCCeEEEEEc
Q 027609 141 LFSTIKKSLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
- ...+.+.-+.|||||.+++--
T Consensus 240 -----g---~~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 240 -----G---GAMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp -----C---THHHHHHHHHEEEEEEEEECC
T ss_pred -----C---HHHHHHHHHHHhcCCEEEEEe
Confidence 1 146778889999999998753
No 371
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=47.93 E-value=4.4 Score=34.95 Aligned_cols=90 Identities=9% Similarity=0.103 Sum_probs=54.3
Q ss_pred CCCeEEeecCcc-hHHHHHHhhC--CCeEEEeccCCCC-CCHHHHHHcCccceec---cccccCCCC-C-CccCeeeecc
Q 027609 70 FVRNVMDMRAVY-GGFAAALKDL--KVWVMNVVPIESP-DTLPIIYERGLFGLYH---DWCESFNTY-P-RTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~GcG~-G~faa~L~~~--~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~---d~~e~f~~y-p-~sFDlVh~~~ 140 (221)
...+||=.|||. |.++..|++. +.. |+.++.+ +-++.+.+.|...++. ++.+.+... . +.||+|.-.
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~---Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~- 246 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAAR---VIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDF- 246 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCE---EEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEES-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCE---EEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEEC-
Confidence 467899999976 6677777653 333 4555554 4777888877543321 111110001 2 367776542
Q ss_pred ccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 141 LFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
.- -...+.+.-+.|||||.+++-
T Consensus 247 ----~G--~~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 247 ----VG--AQSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp ----SC--CHHHHHHHHHHEEEEEEEEEC
T ss_pred ----CC--CHHHHHHHHHHHhcCCEEEEE
Confidence 12 134788889999999999876
No 372
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=47.75 E-value=21 Score=31.97 Aligned_cols=75 Identities=8% Similarity=0.162 Sum_probs=42.3
Q ss_pred CccCeeeeccc----ccccc--c----cHHHHHHHhhhhccCCeEEEEEcChh---hHHHH-HHHHHhcCCeEEEee---
Q 027609 131 RTYDLLHADHL----FSTIK--K----SLKAVVAEVDRILRPDGNLILRDDAE---TIVEV-EDLVKSLHWDVRMIY--- 193 (221)
Q Consensus 131 ~sFDlVh~~~v----~~h~~--~----d~~~vL~EmdRVLRPGG~~ii~d~~~---~~~~i-~~i~~~l~W~~~~~~--- 193 (221)
+-||+|.++.. -+||. . -...++.-.-++|+|||.|++.-=.. ..+.+ +.+.+...=-....-
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~F~~Vr~vKP~AS 284 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQFKFSRVCKPKSS 284 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEECCTTC
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHhcceeeeeCCCCc
Confidence 44999976532 24544 1 33346667789999999999983211 12333 333333332222221
Q ss_pred cCCCeeEEEEEe
Q 027609 194 TNDNQGMLCVHK 205 (221)
Q Consensus 194 ~~~~e~~l~~~K 205 (221)
.++.|.+++++.
T Consensus 285 R~StEvf~La~g 296 (320)
T 2hwk_A 285 LEETEVLFVFIG 296 (320)
T ss_dssp CSTTCEEEEEEE
T ss_pred cccceEEEEEEe
Confidence 236899999875
No 373
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=47.42 E-value=14 Score=32.21 Aligned_cols=86 Identities=16% Similarity=0.085 Sum_probs=47.9
Q ss_pred CCeEEeecCcc-hHHHHHHhh-CCCeEEEeccCCCC----CCHHHHHHcCccceeccccccCCC-C---CCccCeeeecc
Q 027609 71 VRNVMDMRAVY-GGFAAALKD-LKVWVMNVVPIESP----DTLPIIYERGLFGLYHDWCESFNT-Y---PRTYDLLHADH 140 (221)
Q Consensus 71 ~r~VLD~GcG~-G~faa~L~~-~~v~vmnv~~~d~~----~~l~~a~eRGl~~~~~d~~e~f~~-y---p~sFDlVh~~~ 140 (221)
..+||-.|+|. |.+++.+++ .|+.| +.++.+ +.++.+.+-|.. .+ | .+.+.. . .+.+|+|....
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~V---i~~~~~~~~~~~~~~~~~~ga~-~v-~-~~~~~~~~~~~~~~~d~vid~~ 254 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEV---WMANRREPTEVEQTVIEETKTN-YY-N-SSNGYDKLKDSVGKFDVIIDAT 254 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEE---EEEESSCCCHHHHHHHHHHTCE-EE-E-CTTCSHHHHHHHCCEEEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEE---EEEeCCccchHHHHHHHHhCCc-ee-c-hHHHHHHHHHhCCCCCEEEECC
Confidence 67899999843 344455544 36544 333332 345666666643 22 3 221100 0 13578876542
Q ss_pred ccccccccHHHHH-HHhhhhccCCeEEEEE
Q 027609 141 LFSTIKKSLKAVV-AEVDRILRPDGNLILR 169 (221)
Q Consensus 141 v~~h~~~d~~~vL-~EmdRVLRPGG~~ii~ 169 (221)
- . ...+ .+.-++|||||.+++-
T Consensus 255 g------~-~~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 255 G------A-DVNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp C------C-CTHHHHHHGGGEEEEEEEEEC
T ss_pred C------C-hHHHHHHHHHHHhcCCEEEEE
Confidence 1 1 1245 7888999999999875
No 374
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=46.79 E-value=12 Score=32.34 Aligned_cols=90 Identities=13% Similarity=0.165 Sum_probs=51.8
Q ss_pred CCCeEEeec-Cc-chHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceec---cccccCCC-CCCccCeeeeccc
Q 027609 70 FVRNVMDMR-AV-YGGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYH---DWCESFNT-YPRTYDLLHADHL 141 (221)
Q Consensus 70 ~~r~VLD~G-cG-~G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~---d~~e~f~~-yp~sFDlVh~~~v 141 (221)
...+||=.| || .|.+++.+++ .|+. |+.++.+ +.++.+.+-|...++. ++.+.+.. ..+.||+|...
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~---Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~-- 224 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLR---VITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCT-- 224 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEES--
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCE---EEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEEC--
Confidence 467899884 44 3556666655 3654 4555553 4677777766432221 11111111 12568877643
Q ss_pred cccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 142 FSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 142 ~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
. .-...+.+.-+.|||||.++.-
T Consensus 225 ----~-g~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 225 ----F-NTDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp ----S-CHHHHHHHHHHHEEEEEEEEES
T ss_pred ----C-CchHHHHHHHHHhccCCEEEEE
Confidence 1 2245677888999999999753
No 375
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=46.54 E-value=11 Score=32.57 Aligned_cols=89 Identities=8% Similarity=0.113 Sum_probs=51.4
Q ss_pred CCCeEEeecCc--chHHHHHHhh-C-CCeEEEeccCCCC-CCHHHHHHcCccceeccccc-c----CCC-CC-CccCeee
Q 027609 70 FVRNVMDMRAV--YGGFAAALKD-L-KVWVMNVVPIESP-DTLPIIYERGLFGLYHDWCE-S----FNT-YP-RTYDLLH 137 (221)
Q Consensus 70 ~~r~VLD~GcG--~G~faa~L~~-~-~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~d~~e-~----f~~-yp-~sFDlVh 137 (221)
...+||-.|+| .|.+++.++. . |.. |+.++.+ +.++.+.+.|...++ |..+ . +.. .. +.+|+|.
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~---Vi~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vi 245 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGAT---IIGVDVREEAVEAAKRAGADYVI-NASMQDPLAEIRRITESKGVDAVI 245 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCE---EEEEESSHHHHHHHHHHTCSEEE-ETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCe---EEEEcCCHHHHHHHHHhCCCEEe-cCCCccHHHHHHHHhcCCCceEEE
Confidence 46789999998 5556666554 3 654 3444443 356666665532221 1111 0 000 12 4677766
Q ss_pred eccccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 138 ADHLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 138 ~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
... - ....+.+.-+.|||||.+++-
T Consensus 246 ~~~-----g--~~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 246 DLN-----N--SEKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp ESC-----C--CHHHHTTGGGGEEEEEEEEEC
T ss_pred ECC-----C--CHHHHHHHHHHHhcCCEEEEE
Confidence 431 1 134678888999999999874
No 376
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=45.95 E-value=99 Score=25.33 Aligned_cols=102 Identities=12% Similarity=0.228 Sum_probs=57.1
Q ss_pred eEEeecCcc-h-HHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCccc-eeccccccCCCCCC-ccCeeeeccccccccc
Q 027609 73 NVMDMRAVY-G-GFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLFG-LYHDWCESFNTYPR-TYDLLHADHLFSTIKK 147 (221)
Q Consensus 73 ~VLD~GcG~-G-~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~~-~~~d~~e~f~~yp~-sFDlVh~~~v~~h~~~ 147 (221)
+|.=+|||. | .++..|.+.|.. .+|...|.+ +.++.+.+.|... ...+..+. -. ..|+|... .+.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~-~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~aDvVila-----vp~ 72 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFK-GKIYGYDINPESISKAVDLGIIDEGTTSIAKV----EDFSPDFVMLS-----SPV 72 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCC-SEEEEECSCHHHHHHHHHTTSCSEEESCGGGG----GGTCCSEEEEC-----SCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCC-cEEEEEeCCHHHHHHHHHCCCcccccCCHHHH----hcCCCCEEEEc-----CCH
Confidence 566788886 3 466667776641 134555554 3556666676642 12222111 13 67777654 222
Q ss_pred -cHHHHHHHhhhhccCCeEEEEEc--ChhhHHHHHHHHHh
Q 027609 148 -SLKAVVAEVDRILRPDGNLILRD--DAETIVEVEDLVKS 184 (221)
Q Consensus 148 -d~~~vL~EmdRVLRPGG~~ii~d--~~~~~~~i~~i~~~ 184 (221)
....++.++...|+||..++..- .....+.+++.+..
T Consensus 73 ~~~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~ 112 (281)
T 2g5c_A 73 RTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK 112 (281)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhccc
Confidence 34577888888899988665432 22345666666554
No 377
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=45.34 E-value=13 Score=32.86 Aligned_cols=116 Identities=12% Similarity=0.120 Sum_probs=64.7
Q ss_pred CeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHcCccce---eccccccCCC--CC-CccCeeeec---ccc
Q 027609 72 RNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYERGLFGL---YHDWCESFNT--YP-RTYDLLHAD---HLF 142 (221)
Q Consensus 72 r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eRGl~~~---~~d~~e~f~~--yp-~sFDlVh~~---~v~ 142 (221)
-+|+|+=||.|++...|...|.-.--+..+|........+++-.+.. ..|..+ +.+ +| ..+|+++++ +-|
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~-~~~~~~~~~~~D~l~ggpPCQ~f 82 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQ-LTPQVIKKWNVDTILMSPPCQPF 82 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGG-CCHHHHHHTTCCEEEECCCCCCS
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceecccccc-CCHHHhccCCCCEEEecCCCcch
Confidence 47999999999999999887751112455665432223333323321 234322 222 33 368999865 233
Q ss_pred cccc-----ccH-HHHHHHhhhhc---c-CCeEEEEEcCh------hhHHHHHHHHHhcCCeEE
Q 027609 143 STIK-----KSL-KAVVAEVDRIL---R-PDGNLILRDDA------ETIVEVEDLVKSLHWDVR 190 (221)
Q Consensus 143 ~h~~-----~d~-~~vL~EmdRVL---R-PGG~~ii~d~~------~~~~~i~~i~~~l~W~~~ 190 (221)
+..- +|+ ...+.|+-|++ | | .+++-|.. ...+.+.+.+.++...+.
T Consensus 83 S~ag~~~~~~d~r~~L~~~~~r~i~~~~~P--~~~vlENV~gl~~~~~~~~i~~~l~~~GY~v~ 144 (333)
T 4h0n_A 83 TRNGKYLDDNDPRTNSFLYLIGILDQLDNV--DYILMENVKGFENSTVRNLFIDKLKECNFIYQ 144 (333)
T ss_dssp EETTEECCTTCTTSCCHHHHHHHGGGCTTC--CEEEEEECTTGGGSHHHHHHHHHHHHTTEEEE
T ss_pred hhhhhccCCcCcccccHHHHHHHHHHhcCC--CEEEEecchhhhhhhHHHHHHHHHHhCCCeEE
Confidence 3111 122 24667777776 3 6 34444433 235667777778777764
No 378
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=44.61 E-value=23 Score=30.84 Aligned_cols=92 Identities=13% Similarity=0.093 Sum_probs=51.9
Q ss_pred CCCCeEEeecC--cchHHHHHHhh-CCCeEEEeccCCCCCCHHHHHHcCccceec----cccccCCCCCCccCeeeeccc
Q 027609 69 SFVRNVMDMRA--VYGGFAAALKD-LKVWVMNVVPIESPDTLPIIYERGLFGLYH----DWCESFNTYPRTYDLLHADHL 141 (221)
Q Consensus 69 ~~~r~VLD~Gc--G~G~faa~L~~-~~v~vmnv~~~d~~~~l~~a~eRGl~~~~~----d~~e~f~~yp~sFDlVh~~~v 141 (221)
....+||=.|+ |.|.++..+++ .|+.++ .++.++-++.+.+-|...++. ++.+.+... +.||+|.-..
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi---~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~-~g~D~vid~~- 256 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVT---AVCSQDASELVRKLGADDVIDYKSGSVEEQLKSL-KPFDFILDNV- 256 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEE---EEECGGGHHHHHHTTCSEEEETTSSCHHHHHHTS-CCBSEEEESS-
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEE---EEeChHHHHHHHHcCCCEEEECCchHHHHHHhhc-CCCCEEEECC-
Confidence 34678999993 45666666655 465543 233334677777766432221 111111101 4578776431
Q ss_pred cccccccHHHHHHHhhhhccCCeEEEEEc
Q 027609 142 FSTIKKSLKAVVAEVDRILRPDGNLILRD 170 (221)
Q Consensus 142 ~~h~~~d~~~vL~EmdRVLRPGG~~ii~d 170 (221)
- .+...+.+.-+.|||||.+++--
T Consensus 257 ----g-~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 257 ----G-GSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp ----C-TTHHHHGGGGBCSSSCCEEEESC
T ss_pred ----C-ChhhhhHHHHHhhcCCcEEEEeC
Confidence 1 22245677789999999998753
No 379
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=41.87 E-value=22 Score=32.05 Aligned_cols=21 Identities=29% Similarity=0.180 Sum_probs=18.4
Q ss_pred CCCCeEEeecCcchHHHHHHh
Q 027609 69 SFVRNVMDMRAVYGGFAAALK 89 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~ 89 (221)
.....|+|+||+.|.++..++
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a 245 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLI 245 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHH
Confidence 457899999999999998876
No 380
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=41.62 E-value=24 Score=30.36 Aligned_cols=90 Identities=11% Similarity=0.128 Sum_probs=48.2
Q ss_pred CC-CeEEeecC--cchHHHHHHhhC-CCeEEEeccCCCCCC----HHHHHHcCccceec-------cccccCCC----CC
Q 027609 70 FV-RNVMDMRA--VYGGFAAALKDL-KVWVMNVVPIESPDT----LPIIYERGLFGLYH-------DWCESFNT----YP 130 (221)
Q Consensus 70 ~~-r~VLD~Gc--G~G~faa~L~~~-~v~vmnv~~~d~~~~----l~~a~eRGl~~~~~-------d~~e~f~~----yp 130 (221)
.. .+||=.|| |.|.++..|++. |+.++-++. ..+. .+.+.+-|...++. ++.+.+.. -.
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~--~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~ 243 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIR--DRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSG 243 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEEC--CCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHT
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEec--CccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccC
Confidence 35 78999987 456677777664 665433322 2222 45666666432221 11111110 02
Q ss_pred CccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 131 RTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 131 ~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
+.||+|.-. .- . ..+.+.-+.|||||.+++-
T Consensus 244 ~g~Dvvid~-----~G-~--~~~~~~~~~l~~~G~~v~~ 274 (364)
T 1gu7_A 244 GEAKLALNC-----VG-G--KSSTGIARKLNNNGLMLTY 274 (364)
T ss_dssp CCEEEEEES-----SC-H--HHHHHHHHTSCTTCEEEEC
T ss_pred CCceEEEEC-----CC-c--hhHHHHHHHhccCCEEEEe
Confidence 457777643 11 1 1223677999999999874
No 381
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=41.35 E-value=85 Score=25.65 Aligned_cols=83 Identities=13% Similarity=0.083 Sum_probs=48.8
Q ss_pred eEEeecCcc-h-HHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCccc-eeccccccCCCCCCccCeeeeccccccccc-
Q 027609 73 NVMDMRAVY-G-GFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLFG-LYHDWCESFNTYPRTYDLLHADHLFSTIKK- 147 (221)
Q Consensus 73 ~VLD~GcG~-G-~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~~-~~~d~~e~f~~yp~sFDlVh~~~v~~h~~~- 147 (221)
+|.=+|||. | .++..|.+.+. +|...+.+ +.++.+.+.|+.. ...+..+ . ...|+|... .+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~---~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~-~~~D~vi~a-----v~~~ 68 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH---YLIGVSRQQSTCEKAVERQLVDEAGQDLSL----L-QTAKIIFLC-----TPIQ 68 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC---EEEEECSCHHHHHHHHHTTSCSEEESCGGG----G-TTCSEEEEC-----SCHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHhCCCCccccCCHHH----h-CCCCEEEEE-----CCHH
Confidence 466688886 2 36667777775 34445543 3455555666542 2222221 2 567887765 221
Q ss_pred cHHHHHHHhhhhccCCeEEEE
Q 027609 148 SLKAVVAEVDRILRPDGNLIL 168 (221)
Q Consensus 148 d~~~vL~EmdRVLRPGG~~ii 168 (221)
....++.++...++||..++-
T Consensus 69 ~~~~~~~~l~~~~~~~~~vv~ 89 (279)
T 2f1k_A 69 LILPTLEKLIPHLSPTAIVTD 89 (279)
T ss_dssp HHHHHHHHHGGGSCTTCEEEE
T ss_pred HHHHHHHHHHhhCCCCCEEEE
Confidence 346788888888988876543
No 382
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=40.66 E-value=13 Score=31.61 Aligned_cols=89 Identities=10% Similarity=0.034 Sum_probs=49.7
Q ss_pred CCCeEEeecC--cchHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceec----cccccCCC-C-CCccCeeeec
Q 027609 70 FVRNVMDMRA--VYGGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYH----DWCESFNT-Y-PRTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~Gc--G~G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~----d~~e~f~~-y-p~sFDlVh~~ 139 (221)
..++||-.|+ |.|..++.++. .|..+ +.++.+ +.++.+.+.|..-.+. ++.+.+.. . .+.+|++..+
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 216 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKL---IGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDS 216 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEE---EEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEE---EEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEEC
Confidence 4688999994 55666666554 46543 444443 3566666655321111 11111100 1 2468887654
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
.- ...+.+.-+.|||||.+++-
T Consensus 217 ~g--------~~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 217 VG--------RDTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp SC--------GGGHHHHHHTEEEEEEEEEC
T ss_pred Cc--------hHHHHHHHHHhcCCCEEEEE
Confidence 21 23567777999999999875
No 383
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=39.68 E-value=12 Score=32.33 Aligned_cols=86 Identities=15% Similarity=0.188 Sum_probs=47.9
Q ss_pred CeEEeecC--cchHHHHHHhh-CCC-eEEEeccCCCC-CCHHHHHH-cCccceeccccc-----cCCC-CCCccCeeeec
Q 027609 72 RNVMDMRA--VYGGFAAALKD-LKV-WVMNVVPIESP-DTLPIIYE-RGLFGLYHDWCE-----SFNT-YPRTYDLLHAD 139 (221)
Q Consensus 72 r~VLD~Gc--G~G~faa~L~~-~~v-~vmnv~~~d~~-~~l~~a~e-RGl~~~~~d~~e-----~f~~-yp~sFDlVh~~ 139 (221)
.+||-.|| |.|.+++.++. .|. .+ +.++.+ +.++.+.+ -|.. .+.|..+ .+.. ..+.+|++..+
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~V---i~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~d~vi~~ 237 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRV---VGICGTHEKCILLTSELGFD-AAINYKKDNVAEQLRESCPAGVDVYFDN 237 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEE---EEEESCHHHHHHHHHTSCCS-EEEETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeE---EEEeCCHHHHHHHHHHcCCc-eEEecCchHHHHHHHHhcCCCCCEEEEC
Confidence 89999998 55666665544 566 44 334433 35555554 4432 1112111 0000 11257776643
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
.- ...+.+.-+.|||||.+++-
T Consensus 238 ~G--------~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 238 VG--------GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp CC--------HHHHHHHHHTEEEEEEEEEC
T ss_pred CC--------HHHHHHHHHHhccCcEEEEE
Confidence 11 25678888999999999874
No 384
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=38.39 E-value=24 Score=32.17 Aligned_cols=93 Identities=15% Similarity=0.153 Sum_probs=45.7
Q ss_pred hhhHHHHHhhhhhccc-CCCCCCCeEEeecCcchHHHHHHhhC----C--CeEEEeccCCCCCCHHHHHHcCccce-ecc
Q 027609 50 QHWKNVVSKSYLNGMG-INWSFVRNVMDMRAVYGGFAAALKDL----K--VWVMNVVPIESPDTLPIIYERGLFGL-YHD 121 (221)
Q Consensus 50 ~~W~~~v~~~Y~~~L~-i~~~~~r~VLD~GcG~G~faa~L~~~----~--v~vmnv~~~d~~~~l~~a~eRGl~~~-~~d 121 (221)
..+.+.+.......+. +....--.|+++|+|.|.+++.+++. + ...+.+.-++.|..+......-|-+. --.
T Consensus 59 ~~FGe~la~~~~~~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~~~v~ 138 (387)
T 1zkd_A 59 QMFGELLGLWSASVWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGIRNIH 138 (387)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTCSSEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCCCCeE
Confidence 4555555441122222 22223457999999999999987642 1 01224455555543332222213221 113
Q ss_pred ccccCCCCCCccCeeeecccc
Q 027609 122 WCESFNTYPRTYDLLHADHLF 142 (221)
Q Consensus 122 ~~e~f~~yp~sFDlVh~~~v~ 142 (221)
|++.+...|...=+|.|+-+|
T Consensus 139 W~~~l~~lp~~~~~viANE~f 159 (387)
T 1zkd_A 139 WHDSFEDVPEGPAVILANEYF 159 (387)
T ss_dssp EESSGGGSCCSSEEEEEESSG
T ss_pred EeCChhhcCCCCeEEEecccc
Confidence 666554444334455566555
No 385
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=38.18 E-value=26 Score=29.81 Aligned_cols=90 Identities=12% Similarity=0.006 Sum_probs=50.5
Q ss_pred CCCeEEeecCcchH-HHHHHhh-C-CCeEEEeccCCCC-CCHHHHHHcCccceec----cccccCC--CCCCccCeeeec
Q 027609 70 FVRNVMDMRAVYGG-FAAALKD-L-KVWVMNVVPIESP-DTLPIIYERGLFGLYH----DWCESFN--TYPRTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~GcG~G~-faa~L~~-~-~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~----d~~e~f~--~yp~sFDlVh~~ 139 (221)
...+||=.|||.++ +++.+++ . +.. |+.++.+ +-++.+.+-|...++. |+.+... +-...+|.+...
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~~~g~~---Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~ 239 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKNVFGAK---VIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVC 239 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTSCCE---EEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEEC
T ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCE---EEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEe
Confidence 46788889999764 5555554 3 333 4555554 3577787777533321 1111110 011334443322
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
. --...+...-+.|||||.+++.
T Consensus 240 ~-------~~~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 240 A-------VARIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp C-------SCHHHHHHHHHTEEEEEEEEEC
T ss_pred c-------cCcchhheeheeecCCceEEEE
Confidence 1 1245677888999999998876
No 386
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=37.50 E-value=16 Score=31.52 Aligned_cols=89 Identities=12% Similarity=0.023 Sum_probs=51.2
Q ss_pred CCCeEEeecC--cchHHHHHHhh-CCCeEEEeccCCCCCCHHHHHHcCccceec--cccccCC--CCCCccCeeeecccc
Q 027609 70 FVRNVMDMRA--VYGGFAAALKD-LKVWVMNVVPIESPDTLPIIYERGLFGLYH--DWCESFN--TYPRTYDLLHADHLF 142 (221)
Q Consensus 70 ~~r~VLD~Gc--G~G~faa~L~~-~~v~vmnv~~~d~~~~l~~a~eRGl~~~~~--d~~e~f~--~yp~sFDlVh~~~v~ 142 (221)
...+||=.|| |.|.+++.+++ .|+.+ +.+..++.++.+.+.|...+.. ++.+.+. +-.+.||+|.-.-
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~V---i~~~~~~~~~~~~~lGa~~i~~~~~~~~~~~~~~~~~g~D~vid~~-- 224 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARV---FATARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVYDTL-- 224 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEE---EEEECHHHHHHHHHHTSEEEETTSCHHHHHHHHHTTSCEEEEEESS--
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEE---EEEeCHHHHHHHHHcCCCEeccCCCHHHHHHHHhcCCCceEEEECC--
Confidence 4678999994 45666666655 46654 3332234577777776533110 1101000 0125688876431
Q ss_pred ccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 143 STIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 143 ~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
- ...+.+.-+.|||||.+++-
T Consensus 225 ---g---~~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 225 ---G---GPVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp ---C---THHHHHHHHHEEEEEEEEES
T ss_pred ---C---cHHHHHHHHHHhcCCeEEEE
Confidence 1 24677788899999999874
No 387
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=37.46 E-value=16 Score=31.74 Aligned_cols=89 Identities=15% Similarity=0.032 Sum_probs=49.3
Q ss_pred CCCeEEeecC--cchHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceec----cccccCC-CCC-CccCeeeec
Q 027609 70 FVRNVMDMRA--VYGGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYH----DWCESFN-TYP-RTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~Gc--G~G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~----d~~e~f~-~yp-~sFDlVh~~ 139 (221)
...+||-.|+ |.|..++.++. .|..+ +.++.+ +.++.+.+.|....+. ++.+.+. ... +.+|++...
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V---i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 238 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIP---LVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDC 238 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEE---EEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEE---EEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEEC
Confidence 4678999984 55666665544 46543 444443 4566666655321211 1111110 022 468887644
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
.- . ..+.+.-++|||||.+++-
T Consensus 239 ~G------~--~~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 239 IG------G--SYWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp SC------G--GGHHHHHHHEEEEEEEEEC
T ss_pred CC------c--hHHHHHHHhccCCCEEEEE
Confidence 21 1 2466777999999999875
No 388
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=36.51 E-value=40 Score=28.62 Aligned_cols=92 Identities=20% Similarity=0.131 Sum_probs=51.2
Q ss_pred CCCCeEEeecCcchHH-HHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceeccccccCC----CC-C-CccCeeeec
Q 027609 69 SFVRNVMDMRAVYGGF-AAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYHDWCESFN----TY-P-RTYDLLHAD 139 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~f-aa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~d~~e~f~----~y-p-~sFDlVh~~ 139 (221)
....+||=.|||..+. +..+++ .|..+ ++.++.+ +-++.+++-|...++..-.+.+. -. . +.+|+|...
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~--vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v~d~ 236 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKS--VTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILET 236 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSE--EEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEEEEC
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcE--EEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCccccccc
Confidence 3467899999987654 444444 35543 3344443 36778888775433221000000 01 2 446665432
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
.- -...+...-++|||||.+++-
T Consensus 237 -----~G--~~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 237 -----AG--VPQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp -----SC--SHHHHHHHHHHCCTTCEEEEC
T ss_pred -----cc--ccchhhhhhheecCCeEEEEE
Confidence 11 135667778999999999976
No 389
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=35.44 E-value=23 Score=30.69 Aligned_cols=42 Identities=10% Similarity=-0.083 Sum_probs=32.2
Q ss_pred CCCCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc
Q 027609 69 SFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYER 113 (221)
Q Consensus 69 ~~~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR 113 (221)
.....|||-=||+|+.+.+-...|. +..++|.. ...+++.+|
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~gr---~~ig~e~~~~~~~~~~~r 293 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERESR---KWISFEMKPEYVAASAFR 293 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHGG
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCC---CEEEEeCCHHHHHHHHHH
Confidence 4567899999999998888777664 34666765 478888888
No 390
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=34.20 E-value=1e+02 Score=28.02 Aligned_cols=103 Identities=21% Similarity=0.244 Sum_probs=55.0
Q ss_pred CCCeEEeecCcc-h-HHHHHHhhCCCeEEEeccCCCC-CCHHHHHH-----------cCccc------eeccccccCCCC
Q 027609 70 FVRNVMDMRAVY-G-GFAAALKDLKVWVMNVVPIESP-DTLPIIYE-----------RGLFG------LYHDWCESFNTY 129 (221)
Q Consensus 70 ~~r~VLD~GcG~-G-~faa~L~~~~v~vmnv~~~d~~-~~l~~a~e-----------RGl~~------~~~d~~e~f~~y 129 (221)
.+++|-=+|||. | ++|..|+..|.. |+-.|.+ +.++.+.+ +|.+. .....+. .+
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~---V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~ 109 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGIS---VVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSS---ST 109 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCE---EEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEES---CG
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCe---EEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcC---CH
Confidence 467899999997 3 577788888754 3444543 23433322 22110 0000011 11
Q ss_pred C--CccCeeeeccccccccccHHHHHHHhhhhccCCeEEEEEcChhhHHHHHH
Q 027609 130 P--RTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLILRDDAETIVEVED 180 (221)
Q Consensus 130 p--~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~d~~~~~~~i~~ 180 (221)
. ...|+|... +..... --..++.++..+++||-.++..+....+.++.+
T Consensus 110 ~~~~~aDlVIea-Vpe~~~-~k~~v~~~l~~~~~~~~ii~snTs~~~~~~la~ 160 (463)
T 1zcj_A 110 KELSTVDLVVEA-VFEDMN-LKKKVFAELSALCKPGAFLCTNTSALNVDDIAS 160 (463)
T ss_dssp GGGTTCSEEEEC-CCSCHH-HHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHT
T ss_pred HHHCCCCEEEEc-CCCCHH-HHHHHHHHHHhhCCCCeEEEeCCCCcCHHHHHH
Confidence 1 456776654 222111 126788899999999877665444333444443
No 391
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=31.63 E-value=1.1e+02 Score=25.37 Aligned_cols=88 Identities=11% Similarity=0.066 Sum_probs=48.0
Q ss_pred CCeEEeecCcc--hHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHc-----------C--cc-----------ceecccc
Q 027609 71 VRNVMDMRAVY--GGFAAALKDLKVWVMNVVPIESP-DTLPIIYER-----------G--LF-----------GLYHDWC 123 (221)
Q Consensus 71 ~r~VLD~GcG~--G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eR-----------G--l~-----------~~~~d~~ 123 (221)
+++|-=+|+|. .++|..|+..|.. |+-.|.+ +.++.+.++ | +. ....|..
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~---V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~ 80 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFA---VTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLA 80 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHH
Confidence 46677789986 3467778888753 3445543 244433333 2 11 1111111
Q ss_pred ccCCCCCCccCeeeeccccccccccHHHHHHHhhhhccCCeEEE
Q 027609 124 ESFNTYPRTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLI 167 (221)
Q Consensus 124 e~f~~yp~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~i 167 (221)
+. -...|+|..+ +..... ....++.++...++|+-.++
T Consensus 81 ~~----~~~aDlVi~a-v~~~~~-~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 81 QA----VKDADLVIEA-VPESLD-LKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp HH----TTTCSEEEEC-CCSCHH-HHHHHHHHHHHHSCTTCEEE
T ss_pred HH----hccCCEEEEe-ccCcHH-HHHHHHHHHHhhCCCCcEEE
Confidence 11 1456777654 222211 34678899999999987665
No 392
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=31.36 E-value=45 Score=29.27 Aligned_cols=37 Identities=19% Similarity=0.351 Sum_probs=30.2
Q ss_pred cHHHHHHHhhhhccCCeEEEEEcChhhHHHH-HHHHHh
Q 027609 148 SLKAVVAEVDRILRPDGNLILRDDAETIVEV-EDLVKS 184 (221)
Q Consensus 148 d~~~vL~EmdRVLRPGG~~ii~d~~~~~~~i-~~i~~~ 184 (221)
..+.+|...-++|+|||.+++-.-|..-++| +..++.
T Consensus 211 ~L~~~L~~a~~~L~~gGrl~visfHSLEDRiVK~~~~~ 248 (285)
T 1wg8_A 211 ALKEFLEQAAEVLAPGGRLVVIAFHSLEDRVVKRFLRE 248 (285)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEEecCcHHHHHHHHHHHh
Confidence 7889999999999999999998888777776 444543
No 393
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=31.28 E-value=47 Score=28.79 Aligned_cols=37 Identities=14% Similarity=0.321 Sum_probs=29.9
Q ss_pred cHHHHHHHhhhhccCCeEEEEEcChhhHHHHH-HHHHh
Q 027609 148 SLKAVVAEVDRILRPDGNLILRDDAETIVEVE-DLVKS 184 (221)
Q Consensus 148 d~~~vL~EmdRVLRPGG~~ii~d~~~~~~~i~-~i~~~ 184 (221)
..+..|...-++|+|||.+++-.-|..-|+|- ..++.
T Consensus 223 ~l~~~l~~~~~~l~~ggr~~visfhsledr~vk~~~~~ 260 (301)
T 1m6y_A 223 NLKEFLKKAEDLLNPGGRIVVISFHSLEDRIVKETFRN 260 (301)
T ss_dssp HHHHHHHHGGGGEEEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCEEEEEecCcHHHHHHHHHhhc
Confidence 67899999999999999999988887777764 44543
No 394
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=30.52 E-value=50 Score=28.90 Aligned_cols=94 Identities=11% Similarity=0.038 Sum_probs=52.9
Q ss_pred CCeEEeecCcchHHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCc-----cceec-ccccc---CCCCCCccCeeeecc
Q 027609 71 VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP-DTLPIIYERGL-----FGLYH-DWCES---FNTYPRTYDLLHADH 140 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl-----~~~~~-d~~e~---f~~yp~sFDlVh~~~ 140 (221)
...+||+=||+|.++..+++++-. ++-+|.+ +..+.+.+. + ..+++ |-.+. +.+-+..||+|...=
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~~d~---~vfvE~~~~a~~~L~~N-l~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDP 167 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRSQDR---LYLCELHPTEYNFLLKL-PHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDP 167 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCTTSE---EEEECCSHHHHHHHTTS-CCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECC
T ss_pred CCCceeEeCCcHHHHHHHcCCCCe---EEEEeCCHHHHHHHHHH-hCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECC
Confidence 456899999999999999986532 3444442 233333332 1 11222 21111 111125699999875
Q ss_pred ccccccccHHHHHHHhhh--hccCCeEEEEE
Q 027609 141 LFSTIKKSLKAVVAEVDR--ILRPDGNLILR 169 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdR--VLRPGG~~ii~ 169 (221)
-+..-. +.+.++.-+.. .+-|+|++++=
T Consensus 168 PYe~k~-~~~~vl~~L~~~~~r~~~Gi~v~W 197 (283)
T 2oo3_A 168 SYERKE-EYKEIPYAIKNAYSKFSTGLYCVW 197 (283)
T ss_dssp CCCSTT-HHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCCCCc-HHHHHHHHHHHhCccCCCeEEEEE
Confidence 554211 45555554544 45699998876
No 395
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=30.36 E-value=20 Score=30.61 Aligned_cols=89 Identities=16% Similarity=0.072 Sum_probs=50.0
Q ss_pred CCCeEEeecC--cchHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceec----cccccCCC-C-CCccCeeeec
Q 027609 70 FVRNVMDMRA--VYGGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYH----DWCESFNT-Y-PRTYDLLHAD 139 (221)
Q Consensus 70 ~~r~VLD~Gc--G~G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~----d~~e~f~~-y-p~sFDlVh~~ 139 (221)
..++||=.|| |.|..++.++. .|.. |+.++.+ +.++.+.+.|..-.+. ++.+.+.. . .+.+|+|..+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~---Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~ 221 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGAT---VIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDS 221 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCE---EEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCE---EEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEEC
Confidence 4678999996 66766666554 5654 3444444 3566666655321111 11111100 1 2458877643
Q ss_pred cccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 140 HLFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 140 ~v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
.- . ..+.+.-+.|||||.+++-
T Consensus 222 ~g------~--~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 222 IG------K--DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp SC------T--TTHHHHHHTEEEEEEEEEC
T ss_pred Cc------H--HHHHHHHHhhccCCEEEEE
Confidence 11 1 3466777999999999875
No 396
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=30.07 E-value=16 Score=30.14 Aligned_cols=100 Identities=16% Similarity=0.218 Sum_probs=49.9
Q ss_pred CCeEEeecCcchHHHHHHhh----CCCeEEEeccCCCCCCHHHHHHcCccceecccccc-CCCCCCccCeeeeccccccc
Q 027609 71 VRNVMDMRAVYGGFAAALKD----LKVWVMNVVPIESPDTLPIIYERGLFGLYHDWCES-FNTYPRTYDLLHADHLFSTI 145 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~----~~v~vmnv~~~d~~~~l~~a~eRGl~~~~~d~~e~-f~~yp~sFDlVh~~~v~~h~ 145 (221)
---|||+|-|.|..=-+|.+ +.++|+.-+-...++-.+- .++-+.|-+.+=-.. ...|..+.-++|+..-.. .
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp~~~P~-~e~~ilGdi~~tL~~~~~r~g~~a~LaHaD~G~g-~ 118 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHPDSTPP-EAQLILGDIRETLPATLERFGATASLVHADLGGH-N 118 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCGGGCCC-GGGEEESCHHHHHHHHHHHHCSCEEEEEECCCCS-C
T ss_pred CCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCCCCCCc-hHheecccHHHHHHHHHHhcCCceEEEEeecCCC-C
Confidence 44599999999986666654 4678765322111110000 112122211110000 001355666778874333 3
Q ss_pred cc-cHH--HHHH-HhhhhccCCeEEEEEcCh
Q 027609 146 KK-SLK--AVVA-EVDRILRPDGNLILRDDA 172 (221)
Q Consensus 146 ~~-d~~--~vL~-EmdRVLRPGG~~ii~d~~ 172 (221)
.+ |.. ..|. =+..+|.|||+++=++..
T Consensus 119 ~~~d~a~a~~lsplI~~~la~GGi~vS~~pl 149 (174)
T 3iht_A 119 REKNDRFARLISPLIEPHLAQGGLMVSSDRM 149 (174)
T ss_dssp HHHHHHHHHHHHHHHGGGEEEEEEEEESSCC
T ss_pred cchhHHHHHhhhHHHHHHhcCCcEEEeCCcc
Confidence 32 111 1111 257899999999877654
No 397
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=29.13 E-value=1.5e+02 Score=20.84 Aligned_cols=49 Identities=8% Similarity=0.178 Sum_probs=33.7
Q ss_pred hhcc-CCeEE-EEEcChhhHHHHHHHHHhcCCeEEEeecCCCeeEEEEEec
Q 027609 158 RILR-PDGNL-ILRDDAETIVEVEDLVKSLHWDVRMIYTNDNQGMLCVHKT 206 (221)
Q Consensus 158 RVLR-PGG~~-ii~d~~~~~~~i~~i~~~l~W~~~~~~~~~~e~~l~~~K~ 206 (221)
+=|. +|+.+ |+.|+......|.+.++...+++.....+++.-.+..+|.
T Consensus 23 ~~l~~~G~~L~V~~dd~~a~~dI~~~~~~~G~~v~~~~~~~g~~~i~I~Kg 73 (87)
T 3hz7_A 23 AELGEAGGVVTVLVDNDISRQNLQKMAEGMGYQSEYLEKDNGVIEVTIVAG 73 (87)
T ss_dssp HTTGGGCCEEEEEESSHHHHHHHHHHHHHHTCEEEEEECGGGCEEEEEESC
T ss_pred HhccCCCCEEEEEECCccHHHHHHHHHHHCCCEEEEEEecCCEEEEEEEEC
Confidence 3454 88876 4556667789999999999999876553444434444664
No 398
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=28.95 E-value=89 Score=26.80 Aligned_cols=103 Identities=8% Similarity=-0.003 Sum_probs=57.0
Q ss_pred CCeEEeecCcchHHHHHHhhCCCeEEEeccCCCCCCHHHHHHcCccceeccccccCCCC-CCccCeeeeccccccccc--
Q 027609 71 VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTY-PRTYDLLHADHLFSTIKK-- 147 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~~~v~vmnv~~~d~~~~l~~a~eRGl~~~~~d~~e~f~~y-p~sFDlVh~~~v~~h~~~-- 147 (221)
.++||.+|...|.++..|....+.+ ..-+.+........-|.--.... .++.- +..||+|..- +++
T Consensus 20 ~~~~l~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-----~pk~~ 88 (343)
T 2pjd_A 20 QSRILFAGDLQDDLPARLDTAASRA---HTQQFHHWQVLSRQMGDNARFSL---VATADDVADCDTLIYY-----WPKNK 88 (343)
T ss_dssp TCEEEEEECCCSSHHHHSCCSEEEE---EESBHHHHHHHHHHHGGGEEECS---SCCHHHHTTCSEEEEE-----CCSSH
T ss_pred CCeEEEEcCCCChhhhhhhhCCCEE---EECCHHHHHHHHhhcCCceEecc---CCCccccCCCCEEEEE-----CCCCh
Confidence 4689999999999999997443333 11111111122111122111111 11111 2468876543 443
Q ss_pred -cHHHHHHHhhhhccCCeEEEEEcC-hhhHHHHHHHHHh
Q 027609 148 -SLKAVVAEVDRILRPDGNLILRDD-AETIVEVEDLVKS 184 (221)
Q Consensus 148 -d~~~vL~EmdRVLRPGG~~ii~d~-~~~~~~i~~i~~~ 184 (221)
..+..|..+.+.|.||+.+++... ...+..+.+.+..
T Consensus 89 ~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 127 (343)
T 2pjd_A 89 PEAQFQLMNLLSLLPVGTDIFVVGENRSGVRSAEQMLAD 127 (343)
T ss_dssp HHHHHHHHHHHTTSCTTCEEEEEEEGGGTGGGHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEEecCCCHHhHHHHHHH
Confidence 456788889999999999987643 3344455555444
No 399
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=28.49 E-value=53 Score=29.70 Aligned_cols=40 Identities=10% Similarity=0.163 Sum_probs=32.2
Q ss_pred cHHHHHHHhhhhccCCeEEEEEcChhhHHHH-HHHHHhcCC
Q 027609 148 SLKAVVAEVDRILRPDGNLILRDDAETIVEV-EDLVKSLHW 187 (221)
Q Consensus 148 d~~~vL~EmdRVLRPGG~~ii~d~~~~~~~i-~~i~~~l~W 187 (221)
..+.+|...-++|+|||.+++-.-|..-|+| +..++...-
T Consensus 252 ~L~~~L~~a~~~L~~gGRl~VISFHSLEDRiVK~~f~~~~~ 292 (347)
T 3tka_A 252 EIEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSR 292 (347)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCCEEEEEecCchhHHHHHHHHHHhcc
Confidence 7888999999999999999999888877776 455665433
No 400
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=28.41 E-value=21 Score=30.90 Aligned_cols=89 Identities=15% Similarity=-0.002 Sum_probs=50.3
Q ss_pred CCCeEEeecC--cchHHHHHHhh-CCCeEEEeccCCCC-CCHHHHHHcCccceec----cccccCCCC-CCccCeeeecc
Q 027609 70 FVRNVMDMRA--VYGGFAAALKD-LKVWVMNVVPIESP-DTLPIIYERGLFGLYH----DWCESFNTY-PRTYDLLHADH 140 (221)
Q Consensus 70 ~~r~VLD~Gc--G~G~faa~L~~-~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~----d~~e~f~~y-p~sFDlVh~~~ 140 (221)
...+||=.|+ |.|.+++.+++ .|+. |+.++.+ +.++.+.+-|...++. ++.+.+... .+.+|+|....
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~---Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~ 243 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAE---VYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMI 243 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCE---EEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECC
Confidence 4678998853 45666666655 4664 4445543 4667777766432221 111100000 34688877542
Q ss_pred ccccccccHHHHHHHhhhhccCCeEEEEE
Q 027609 141 LFSTIKKSLKAVVAEVDRILRPDGNLILR 169 (221)
Q Consensus 141 v~~h~~~d~~~vL~EmdRVLRPGG~~ii~ 169 (221)
- ...+.+.-+.|||||.+++-
T Consensus 244 g--------~~~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 244 G--------AAYFERNIASLAKDGCLSII 264 (353)
T ss_dssp C--------GGGHHHHHHTEEEEEEEEEC
T ss_pred C--------HHHHHHHHHHhccCCEEEEE
Confidence 1 12566677899999999875
No 401
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=28.04 E-value=31 Score=29.99 Aligned_cols=83 Identities=18% Similarity=0.073 Sum_probs=49.2
Q ss_pred CeEEeecCcc--hHHHHHHhhCCCeEEEeccCCCC--CCHHHHHHcCccceeccccccCCCCCCccCeeeeccccccccc
Q 027609 72 RNVMDMRAVY--GGFAAALKDLKVWVMNVVPIESP--DTLPIIYERGLFGLYHDWCESFNTYPRTYDLLHADHLFSTIKK 147 (221)
Q Consensus 72 r~VLD~GcG~--G~faa~L~~~~v~vmnv~~~d~~--~~l~~a~eRGl~~~~~d~~e~f~~yp~sFDlVh~~~v~~h~~~ 147 (221)
.+|.=+|||. ++++..|.+.|..+ +-.+.+ ...+.+.+.|+. .. +..+.+ ...|+|... .+.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V---~~~~~~~~~~~~~a~~~G~~-~~-~~~e~~----~~aDvVila-----vp~ 82 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDV---TVGLRSGSATVAKAEAHGLK-VA-DVKTAV----AAADVVMIL-----TPD 82 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCE---EEECCTTCHHHHHHHHTTCE-EE-CHHHHH----HTCSEEEEC-----SCH
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEE---EEEECChHHHHHHHHHCCCE-Ec-cHHHHH----hcCCEEEEe-----CCc
Confidence 4577789986 35777788877543 333332 246777777752 11 322211 346777654 332
Q ss_pred -cHHHHHH-HhhhhccCCeEEEE
Q 027609 148 -SLKAVVA-EVDRILRPDGNLIL 168 (221)
Q Consensus 148 -d~~~vL~-EmdRVLRPGG~~ii 168 (221)
....++. ++...|+||-.++.
T Consensus 83 ~~~~~v~~~~i~~~l~~~~ivi~ 105 (338)
T 1np3_A 83 EFQGRLYKEEIEPNLKKGATLAF 105 (338)
T ss_dssp HHHHHHHHHHTGGGCCTTCEEEE
T ss_pred HHHHHHHHHHHHhhCCCCCEEEE
Confidence 2356777 88888999876663
No 402
>1qz7_B Axin; beta-catenin, protein-protein complex, cell adhesion; 2.20A {Xenopus laevis}
Probab=26.52 E-value=42 Score=23.62 Aligned_cols=37 Identities=11% Similarity=0.284 Sum_probs=23.6
Q ss_pred CCCCCCccCeeeeccccc--cccccHHHHHHH-hhhhccC
Q 027609 126 FNTYPRTYDLLHADHLFS--TIKKSLKAVVAE-VDRILRP 162 (221)
Q Consensus 126 f~~yp~sFDlVh~~~v~~--h~~~d~~~vL~E-mdRVLRP 162 (221)
+.-||-.|+-+=|...+. -..+||+.+|.| +.||+|-
T Consensus 10 ~~~fp~~~~~~g~~g~~~rd~~EedPesILDeHvsRV~kt 49 (70)
T 1qz7_B 10 MHHFNSRYSETGCVGMQIRDAHEENPESILDEHVQRVMKT 49 (70)
T ss_pred cccCCcccccccccccccccccccChHHHHHHHHHHHHhC
Confidence 344776666555554332 122399999998 6899983
No 403
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=25.82 E-value=1.6e+02 Score=20.18 Aligned_cols=57 Identities=18% Similarity=0.217 Sum_probs=37.9
Q ss_pred HHHHHHHhhhhccCCeEE-EEEcChhhHHHHHHHHHhcCCeEEEeecCCCeeEEEEEe
Q 027609 149 LKAVVAEVDRILRPDGNL-ILRDDAETIVEVEDLVKSLHWDVRMIYTNDNQGMLCVHK 205 (221)
Q Consensus 149 ~~~vL~EmdRVLRPGG~~-ii~d~~~~~~~i~~i~~~l~W~~~~~~~~~~e~~l~~~K 205 (221)
|.--+++.-+=|.||..+ |+.|+......|.+.++...+++.....+++.-.+..+|
T Consensus 23 Pvl~~kkal~~l~~G~~l~V~~dd~~a~~di~~~~~~~G~~~~~~~~~~~~~~i~I~K 80 (82)
T 3lvj_C 23 PVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRK 80 (82)
T ss_dssp HHHHHHHHHHTSCTTCEEEEEECCTTHHHHHHHHHHHTTCEEEEEECSSSSEEEEEEC
T ss_pred HHHHHHHHHHhCCCCCEEEEEECCccHHHHHHHHHHHCCCEEEEEEecCCEEEEEEEE
Confidence 344444444456789865 566777778899999999999987665444444444455
No 404
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=25.78 E-value=2e+02 Score=23.79 Aligned_cols=101 Identities=6% Similarity=0.037 Sum_probs=57.0
Q ss_pred CCeEEeecCcc-h-HHHHHHhhCCCeEEEeccCCCC-CCHHHHHHcCccceeccccccCCCCCCccCeeeeccccccccc
Q 027609 71 VRNVMDMRAVY-G-GFAAALKDLKVWVMNVVPIESP-DTLPIIYERGLFGLYHDWCESFNTYPRTYDLLHADHLFSTIKK 147 (221)
Q Consensus 71 ~r~VLD~GcG~-G-~faa~L~~~~v~vmnv~~~d~~-~~l~~a~eRGl~~~~~d~~e~f~~yp~sFDlVh~~~v~~h~~~ 147 (221)
..+|-=+|||. | .++..|++.|.. |+..|.+ +.++.+.++|+. ...+..+. -...|+|... .+.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~---V~~~d~~~~~~~~~~~~g~~-~~~~~~~~----~~~aDvvi~~-----vp~ 69 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYL---LNVFDLVQSAVDGLVAAGAS-AARSARDA----VQGADVVISM-----LPA 69 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCE---EEEECSSHHHHHHHHHTTCE-ECSSHHHH----HTTCSEEEEC-----CSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCe---EEEEcCCHHHHHHHHHCCCe-EcCCHHHH----HhCCCeEEEE-----CCC
Confidence 34677789986 3 477778888753 4444553 355555666643 11221111 1456777654 331
Q ss_pred --cHHHHHH---HhhhhccCCeEEEEEcC--hhhHHHHHHHHHh
Q 027609 148 --SLKAVVA---EVDRILRPDGNLILRDD--AETIVEVEDLVKS 184 (221)
Q Consensus 148 --d~~~vL~---EmdRVLRPGG~~ii~d~--~~~~~~i~~i~~~ 184 (221)
....++. ++...|+||-.++-..+ .....++.+.+..
T Consensus 70 ~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~ 113 (302)
T 2h78_A 70 SQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARE 113 (302)
T ss_dssp HHHHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHH
Confidence 3456776 78888898887765322 2234556665543
No 405
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=24.72 E-value=35 Score=31.66 Aligned_cols=20 Identities=40% Similarity=0.466 Sum_probs=17.2
Q ss_pred CCeEEeecCcchHHHHHHhh
Q 027609 71 VRNVMDMRAVYGGFAAALKD 90 (221)
Q Consensus 71 ~r~VLD~GcG~G~faa~L~~ 90 (221)
--+|+++|+|.|++++.+++
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~ 157 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLT 157 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHH
Confidence 35899999999999998754
No 406
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=24.19 E-value=55 Score=24.29 Aligned_cols=23 Identities=22% Similarity=0.161 Sum_probs=17.5
Q ss_pred eEEeecCcchHHHHH--HhhCCCeE
Q 027609 73 NVMDMRAVYGGFAAA--LKDLKVWV 95 (221)
Q Consensus 73 ~VLD~GcG~G~faa~--L~~~~v~v 95 (221)
.|+=+|+|+.|++++ |+++|+.|
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V 28 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQV 28 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCE
Confidence 488899999998776 56777543
No 407
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=23.75 E-value=1.8e+02 Score=26.94 Aligned_cols=93 Identities=11% Similarity=0.018 Sum_probs=51.6
Q ss_pred CCCCeEEeecCcc--hHHHHHHhhCCCeEEEeccCCCCC---------CHHHHHHcCccce------ec--cccccCCCC
Q 027609 69 SFVRNVMDMRAVY--GGFAAALKDLKVWVMNVVPIESPD---------TLPIIYERGLFGL------YH--DWCESFNTY 129 (221)
Q Consensus 69 ~~~r~VLD~GcG~--G~faa~L~~~~v~vmnv~~~d~~~---------~l~~a~eRGl~~~------~~--d~~e~f~~y 129 (221)
..+++|-=+|+|+ +++|..|++.|..| +-.|.+. .++...++|.+.. .. ..+..+.
T Consensus 52 ~~i~kVaVIGaG~MG~~IA~~la~aG~~V---~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-- 126 (460)
T 3k6j_A 52 YDVNSVAIIGGGTMGKAMAICFGLAGIET---FLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-- 126 (460)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEE---EEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG--
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCeE---EEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH--
Confidence 3567888899997 56888898888543 4444431 1233445554210 00 0011111
Q ss_pred C-CccCeeeeccccccccccHHHHHHHhhhhccCCeEEEE
Q 027609 130 P-RTYDLLHADHLFSTIKKSLKAVVAEVDRILRPDGNLIL 168 (221)
Q Consensus 130 p-~sFDlVh~~~v~~h~~~d~~~vL~EmdRVLRPGG~~ii 168 (221)
. ...|+|.-. +..... --..++.|+..+++|+-.|+-
T Consensus 127 al~~aDlVIeA-Vpe~~~-vk~~v~~~l~~~~~~~aIlas 164 (460)
T 3k6j_A 127 KLSNCDLIVES-VIEDMK-LKKELFANLENICKSTCIFGT 164 (460)
T ss_dssp GCTTCSEEEEC-CCSCHH-HHHHHHHHHHTTSCTTCEEEE
T ss_pred HHccCCEEEEc-CCCCHH-HHHHHHHHHHhhCCCCCEEEe
Confidence 1 456666654 222111 235688999999999877653
No 408
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=21.89 E-value=2.5e+02 Score=23.61 Aligned_cols=102 Identities=17% Similarity=0.106 Sum_probs=53.0
Q ss_pred CeEEeecCcch--HHHHHHhhCCCeEEEeccCCCCCCHHHHHHcCcc-ce-e-cc--c-----cccCCCCCCccCeeeec
Q 027609 72 RNVMDMRAVYG--GFAAALKDLKVWVMNVVPIESPDTLPIIYERGLF-GL-Y-HD--W-----CESFNTYPRTYDLLHAD 139 (221)
Q Consensus 72 r~VLD~GcG~G--~faa~L~~~~v~vmnv~~~d~~~~l~~a~eRGl~-~~-~-~d--~-----~e~f~~yp~sFDlVh~~ 139 (221)
.+|.=+|||.= .||..|.+.|.. |+-++.++ .+.+.++|+. .. + .+ + ..........+|+|...
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~---V~~~~r~~-~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVila 78 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHC---VSVVSRSD-YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLC 78 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCE---EEEECSTT-HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCe---EEEEeCCh-HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEe
Confidence 35677788853 366777777643 33334333 4667777751 11 1 00 0 00000011367887764
Q ss_pred cccccccc-cHHHHHHHhhhhccCCeEEEEEc-ChhhHHHHHHHH
Q 027609 140 HLFSTIKK-SLKAVVAEVDRILRPDGNLILRD-DAETIVEVEDLV 182 (221)
Q Consensus 140 ~v~~h~~~-d~~~vL~EmdRVLRPGG~~ii~d-~~~~~~~i~~i~ 182 (221)
.+. ....++.++...|+|+..++.-- .....+.+++.+
T Consensus 79 -----vK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~~~ 118 (320)
T 3i83_A 79 -----IKVVEGADRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAF 118 (320)
T ss_dssp -----CCCCTTCCHHHHHTTSCCTTCEEEEECSSSSCSHHHHHHS
T ss_pred -----cCCCChHHHHHHHHhhcCCCCEEEEeCCCCChHHHHHHHC
Confidence 111 33468888989999987655431 122234455544
Done!