Query 027610
Match_columns 221
No_of_seqs 22 out of 24
Neff 2.7
Searched_HMMs 13730
Date Mon Mar 25 21:19:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027610.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027610hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1eija_ a.5.6.1 (A:) Hypotheti 42.1 15 0.0011 25.1 4.2 38 174-211 20-67 (72)
2 d2csba1 a.60.2.4 (A:351-409) T 38.2 3.5 0.00026 27.5 0.3 28 87-114 11-46 (59)
3 d2crua1 a.5.6.1 (A:8-112) Prog 35.6 19 0.0014 25.9 4.1 38 174-211 43-90 (105)
4 d1wa8b1 a.25.3.1 (B:602-695) E 29.7 53 0.0038 21.4 5.3 58 124-184 7-69 (94)
5 d2isya2 a.76.1.1 (A:65-140) Ir 27.4 35 0.0026 22.4 4.0 41 96-136 17-61 (76)
6 d1sqwa1 b.122.1.1 (A:95-170) N 21.3 12 0.00086 26.2 0.5 17 1-17 42-58 (76)
7 d2f7fa2 d.41.2.1 (A:4-140) Put 19.2 61 0.0044 23.2 4.3 37 93-129 53-89 (137)
8 d2cyya1 a.4.5.32 (A:5-64) Puta 18.7 23 0.0017 21.9 1.5 14 199-212 2-15 (60)
9 d1yzma1 a.2.19.1 (A:456-501) F 17.9 1E+02 0.0075 19.4 4.6 37 125-169 9-45 (46)
10 d1atga_ c.94.1.1 (A:) Molybdat 16.8 11 0.00077 25.9 -0.6 18 92-109 205-222 (231)
No 1
>d1eija_ a.5.6.1 (A:) Hypothetical protein MTH1615 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=42.13 E-value=15 Score=25.05 Aligned_cols=38 Identities=21% Similarity=0.358 Sum_probs=28.5
Q ss_pred HHHHHHHHHhccchhH-----HHHHHHHHhchh-----hHHHHHHHHH
Q 027610 174 TARKSLTKILTSKDVK-----ATLLELVEQNKI-----NRSLLTLLDE 211 (221)
Q Consensus 174 ~akerl~KiLtsKDkK-----atlLEMve~nEi-----d~sLlaLLde 211 (221)
.|++||..|--+|--| ..|+.|+.+|.| |..|..||+.
T Consensus 20 eAreRL~~i~lvkPekA~~vE~~liqlaq~G~i~~kisd~~L~~iL~~ 67 (72)
T d1eija_ 20 EARSRLANLRLTRPDFVEQIELQLIQLAQMGRVRSKITDEQLKELLKR 67 (72)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHHCCSSCCCCCHHHHHHHHHH
T ss_pred HHHHHHHhhhhcCHHHHHHHHHHHHHHHHcCCCCCCcCHHHHHHHHHH
Confidence 5899999998766554 567888999887 5667777754
No 2
>d2csba1 a.60.2.4 (A:351-409) Topoisomerase V {Methanopyrus kandleri [TaxId: 2320]}
Probab=38.23 E-value=3.5 Score=27.53 Aligned_cols=28 Identities=46% Similarity=0.787 Sum_probs=21.3
Q ss_pred cCCCCCHHHHHHHh------hccchhhhH--HHHHh
Q 027610 87 RVLPDTAEEMIEYF------LDTEAQELE--FEIAR 114 (221)
Q Consensus 87 Rv~Pdt~~~LIEyf------LdTea~EmE--~EIaR 114 (221)
-.-||..++|||+| |-|+.+||| ||-.|
T Consensus 11 glspdaadeliehfesiagilatdleeiermyeegr 46 (59)
T d2csba1 11 GLSPDAADELIEHFESIAGILATDLEEIERMYEEGR 46 (59)
T ss_dssp CCCHHHHHHHHHHHSSHHHHHTSCHHHHHHHHHHTS
T ss_pred CCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHHccc
Confidence 45688999999998 678888887 44443
No 3
>d2crua1 a.5.6.1 (A:8-112) Programmed cell death protein 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.58 E-value=19 Score=25.89 Aligned_cols=38 Identities=21% Similarity=0.455 Sum_probs=29.8
Q ss_pred HHHHHHHHHhccc-----hhHHHHHHHHHhchh-----hHHHHHHHHH
Q 027610 174 TARKSLTKILTSK-----DVKATLLELVEQNKI-----NRSLLTLLDE 211 (221)
Q Consensus 174 ~akerl~KiLtsK-----DkKatlLEMve~nEi-----d~sLlaLLde 211 (221)
.|++||..|--+| .+...|+.|+.+|.| |..|..||+.
T Consensus 43 eAreRL~rI~lvkPe~A~~VE~~liqlaq~G~i~~kisd~~Lk~iL~~ 90 (105)
T d2crua1 43 SARARLSNLALVKPEKTKAVENYLIQMARYGQLSEKVSEQGLIEILKK 90 (105)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTCCCSCBCHHHHHHHHHH
T ss_pred HHHHHHHhhcccCHHHHHHHHHHHHHHHHcCCCCCCcCHHHHHHHHHH
Confidence 5899999987754 455678889999988 6678888875
No 4
>d1wa8b1 a.25.3.1 (B:602-695) ESAT-6, EsxA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=29.68 E-value=53 Score=21.40 Aligned_cols=58 Identities=19% Similarity=0.270 Sum_probs=35.0
Q ss_pred HHHHHHHhhhhhhhhccCchhhHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHhc
Q 027610 124 FSHLKFELGQLRFAVSKTQDMEDRLIELEALQKALL-----EGTEAYDNMQADLITARKSLTKILT 184 (221)
Q Consensus 124 f~~L~~ei~~~rfa~~rt~~~Edrl~ELEAL~k~l~-----egvEayDk~~~~lv~akerl~KiLt 184 (221)
|+.|..-.+.++ .....++..|.+|+..-..|. .+-++|+..+.+.-++-..|..+|+
T Consensus 7 ~~~l~~~a~~i~---~~~~~i~~~l~~L~~~~~~l~~~W~G~A~~af~~~~~~W~~~~~~l~~~L~ 69 (94)
T d1wa8b1 7 FAGIEAAASAIQ---GNVTSIHSLLDEGKQSLTKLAAAWGGSGSEAYQGVQQKWDATATELNNALQ 69 (94)
T ss_dssp HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHGGGGSCSSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444443 222345555555554444443 3445999999999888888888886
No 5
>d2isya2 a.76.1.1 (A:65-140) Iron-dependent regulator {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=27.42 E-value=35 Score=22.43 Aligned_cols=41 Identities=20% Similarity=0.173 Sum_probs=33.7
Q ss_pred HHHHhh-c---cchhhhHHHHHhhccCCCHHHHHHHHHHhhhhhh
Q 027610 96 MIEYFL-D---TEAQELEFEIARLRPRLNQEFFSHLKFELGQLRF 136 (221)
Q Consensus 96 LIEyfL-d---Tea~EmE~EIaRcRPrLt~eFf~~L~~ei~~~rf 136 (221)
|+|.|| + -+..+.+-+.-++-.-++++++..|..-++..++
T Consensus 17 lle~fL~~~lgv~~~~a~~~A~~iEH~is~e~~~~L~~~l~~p~~ 61 (76)
T d2isya2 17 LAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVLNNPTT 61 (76)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHTTTCCHHHHHHHHHHTTSCCB
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhccCCHHHHHHHHHHhCCCCC
Confidence 667776 3 4667888999999999999999999998876653
No 6
>d1sqwa1 b.122.1.1 (A:95-170) Nip7p homolog, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.30 E-value=12 Score=26.21 Aligned_cols=17 Identities=35% Similarity=0.706 Sum_probs=11.5
Q ss_pred Ccccccccccccchhhc
Q 027610 1 MAALSLGLGIASTAITT 17 (221)
Q Consensus 1 ~~~~~l~~g~~~~~~~~ 17 (221)
|.-++||||+++.+-+.
T Consensus 42 m~D~PLGFGvaakst~e 58 (76)
T d1sqwa1 42 MADIPLGFGVAAKSTQD 58 (76)
T ss_dssp TTCCEEEEEEESSCHHH
T ss_pred CCCCccceeeeccCHHH
Confidence 45679999996554333
No 7
>d2f7fa2 d.41.2.1 (A:4-140) Putative nicotinate phosphoribosyltransferase EF2626 {Enterococcus faecalis [TaxId: 1351]}
Probab=19.24 E-value=61 Score=23.20 Aligned_cols=37 Identities=16% Similarity=0.276 Sum_probs=22.4
Q ss_pred HHHHHHHhhccchhhhHHHHHhhccCCCHHHHHHHHH
Q 027610 93 AEEMIEYFLDTEAQELEFEIARLRPRLNQEFFSHLKF 129 (221)
Q Consensus 93 ~~~LIEyfLdTea~EmE~EIaRcRPrLt~eFf~~L~~ 129 (221)
-+++|+|+-+--..+=|.+=-|--|-++++|+++|+.
T Consensus 53 L~~~l~~l~~l~ft~eei~yL~~~~~~~~~fl~~L~~ 89 (137)
T d2f7fa2 53 LERLVNYLENLTFTESDIAYLREVEEYPEDFLTYLAN 89 (137)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHTSCCCHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCHHHHHHHHhCCCCCHHHHHHHHh
Confidence 3555666655333222222234458999999999964
No 8
>d2cyya1 a.4.5.32 (A:5-64) Putative transcriptional regulator PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=18.67 E-value=23 Score=21.86 Aligned_cols=14 Identities=14% Similarity=0.688 Sum_probs=12.6
Q ss_pred chhhHHHHHHHHHh
Q 027610 199 NKINRSLLTLLDEN 212 (221)
Q Consensus 199 nEid~sLlaLLdeN 212 (221)
+++|+.||.+|++|
T Consensus 2 D~~D~~Il~~L~~n 15 (60)
T d2cyya1 2 DEIDKKIIKILQND 15 (60)
T ss_dssp CHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHc
Confidence 57899999999998
No 9
>d1yzma1 a.2.19.1 (A:456-501) FYVE finger-containing Rab5 effector protein rabenosyn-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.87 E-value=1e+02 Score=19.40 Aligned_cols=37 Identities=27% Similarity=0.342 Sum_probs=28.7
Q ss_pred HHHHHHhhhhhhhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 027610 125 SHLKFELGQLRFAVSKTQDMEDRLIELEALQKALLEGTEAYDNMQ 169 (221)
Q Consensus 125 ~~L~~ei~~~rfa~~rt~~~Edrl~ELEAL~k~l~egvEayDk~~ 169 (221)
..|++-|-|.|-| -|+-|.+.|+.=|.+--+.|++.+
T Consensus 9 ~~ik~yI~QAk~a--------~R~dEV~~Le~NLreLq~e~~~qq 45 (46)
T d1yzma1 9 HNITSFIRQAKAA--------GRMDEVRTLQENLRQLQDEYDQQQ 45 (46)
T ss_dssp HHHHHHHHHHHHT--------TCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh--------cchHHHHHHHHHHHHHHHHHHhhc
Confidence 3456667666643 478899999999999999999876
No 10
>d1atga_ c.94.1.1 (A:) Molybdate-binding protein, ModA {Azotobacter vinelandii [TaxId: 354]}
Probab=16.82 E-value=11 Score=25.92 Aligned_cols=18 Identities=17% Similarity=0.344 Sum_probs=14.6
Q ss_pred CHHHHHHHhhccchhhhH
Q 027610 92 TAEEMIEYFLDTEAQELE 109 (221)
Q Consensus 92 t~~~LIEyfLdTea~EmE 109 (221)
....+|+|+++.|+|++=
T Consensus 205 ~A~~Fidfl~S~e~Q~i~ 222 (231)
T d1atga_ 205 NAEQFMSWMKGPKAVAII 222 (231)
T ss_dssp HHHHHHHHTTSHHHHHHH
T ss_pred HHHHHHHHHCCHHHHHHH
Confidence 346899999999999873
Done!