BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027613
(221 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5R7Q3|NIPA2_PONAB Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1
Length = 360
Score = 141 bits (356), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 101/154 (65%), Gaps = 3/154 (1%)
Query: 53 PEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVI 112
P +GQT+++VYI +CS++G+ SV VK LGIA+K F G L +P WI + ++VCV
Sbjct: 171 PRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVS 230
Query: 113 TQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTIL 172
TQ+NYLN+ALD FNT++V+PIYYV FT+ + S I+FK+W ++ + GF TI+
Sbjct: 231 TQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTII 290
Query: 173 SGTFLLHKTKDAVDGSSASIQMRMSKHSDENAYD 206
G FLLH KD V S AS+ + K DE A +
Sbjct: 291 VGIFLLHAFKD-VSFSLASLPVSFRK--DEKAMN 321
>sp|Q8N8Q9|NIPA2_HUMAN Magnesium transporter NIPA2 OS=Homo sapiens GN=NIPA2 PE=2 SV=1
Length = 360
Score = 141 bits (356), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 101/154 (65%), Gaps = 3/154 (1%)
Query: 53 PEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVI 112
P +GQT+++VYI +CS++G+ SV VK LGIA+K F G L +P WI + ++VCV
Sbjct: 171 PRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVS 230
Query: 113 TQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTIL 172
TQ+NYLN+ALD FNT++V+PIYYV FT+ + S I+FK+W ++ + GF TI+
Sbjct: 231 TQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTII 290
Query: 173 SGTFLLHKTKDAVDGSSASIQMRMSKHSDENAYD 206
G FLLH KD V S AS+ + K DE A +
Sbjct: 291 VGIFLLHAFKD-VSFSLASLPVSFRK--DEKAMN 321
>sp|Q3SWX0|NIPA2_BOVIN Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1
Length = 360
Score = 141 bits (355), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 102/154 (66%), Gaps = 3/154 (1%)
Query: 53 PEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVI 112
P +GQT+++VYI +CS++G++SV K LGIA+K F G L +P TWI + ++VCV
Sbjct: 171 PRHGQTNILVYITICSVIGAVSVSCAKGLGIAIKELFAGKPVLQHPLTWILLLSLIVCVS 230
Query: 113 TQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTIL 172
TQ+NYLN+ALD FNT++V+PIYYV FT+ I S I+FK+W ++ + GF TI+
Sbjct: 231 TQINYLNRALDIFNTSIVTPIYYVFFTTSVITCSAILFKEWQDMPVDDVIGTLSGFFTII 290
Query: 173 SGTFLLHKTKDAVDGSSASIQMRMSKHSDENAYD 206
G FLLH KD V S +S+ + K DE A +
Sbjct: 291 VGIFLLHAFKD-VSFSLSSLPVSFRK--DEKAVN 321
>sp|Q9JJC8|NIPA2_MOUSE Magnesium transporter NIPA2 OS=Mus musculus GN=Nipa2 PE=1 SV=1
Length = 359
Score = 137 bits (346), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 99/154 (64%), Gaps = 3/154 (1%)
Query: 53 PEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVI 112
P +GQT+++VYI +CS++G+ SV VK LGIA+K G L +P WI ++VCV
Sbjct: 171 PRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELLAGKPVLQHPLAWILLFSLVVCVS 230
Query: 113 TQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTIL 172
TQ+NYLN+ALD FNT++V+PIYYV FT+ + S I+FK+W ++ + GF TI+
Sbjct: 231 TQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTII 290
Query: 173 SGTFLLHKTKDAVDGSSASIQMRMSKHSDENAYD 206
G FLLH KD V S AS+ + K DE A +
Sbjct: 291 VGIFLLHAFKD-VSFSLASLPVSFRK--DEKAMN 321
>sp|Q8BZF2|NIPA4_MOUSE Magnesium transporter NIPA4 OS=Mus musculus GN=Nipal4 PE=1 SV=1
Length = 406
Score = 133 bits (335), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 96/133 (72%)
Query: 51 ILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVC 110
+ P YGQ ++++YI +CS++GS SV +VK LG+ ++ F+G+ + +P +I ++I+ +
Sbjct: 217 VAPRYGQRNILIYIIICSVIGSFSVTAVKGLGVTIRNFFQGLPVVRHPLPYILSLILGLS 276
Query: 111 VITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVT 170
+I Q+N+LN+ALD FNT++V PIYYV FT++ + +S+++FK+W + IV + GFVT
Sbjct: 277 IIIQVNFLNRALDIFNTSLVFPIYYVFFTTVVVASSIVLFKEWYTMSAVDIVGTLSGFVT 336
Query: 171 ILSGTFLLHKTKD 183
I+ G F+LH KD
Sbjct: 337 IILGVFMLHAFKD 349
>sp|Q8BMW7|NIPA3_MOUSE Magnesium transporter NIPA3 OS=Mus musculus GN=Nipal1 PE=1 SV=2
Length = 416
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 102/159 (64%), Gaps = 4/159 (2%)
Query: 51 ILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVC 110
+ P+ GQT+++VYI +CSL+G+ SV SVK LGIA+K E P +I ++ +
Sbjct: 227 VAPKKGQTNILVYIAICSLIGAFSVSSVKGLGIAIKELLERKPVYKDPLFFILLTMLALS 286
Query: 111 VITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVT 170
V TQ+NYLNKALDTFNT++V+PIYYV FTS+ + S I+F++W I+ + GF T
Sbjct: 287 VTTQINYLNKALDTFNTSLVTPIYYVFFTSMVVTCSAILFQEWYGMKAGDIIGTLSGFFT 346
Query: 171 ILSGTFLLHKTKDA----VDGSSASIQMRMSKHSDENAY 205
I++G FLLH K+ + S + + +S + ++N+Y
Sbjct: 347 IINGIFLLHAFKNTNITWSELMSTAKKEALSPNGNQNSY 385
>sp|Q0D2K0|NIPA4_HUMAN Magnesium transporter NIPA4 OS=Homo sapiens GN=NIPAL4 PE=1 SV=3
Length = 466
Score = 127 bits (318), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 101/142 (71%), Gaps = 1/142 (0%)
Query: 51 ILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVC 110
I P YGQ ++++YI +CS++G+ SV +VK LGI +K F+G+ + +P +I ++I+ +
Sbjct: 277 IAPRYGQRNILIYIIICSVIGAFSVAAVKGLGITIKNFFQGLPVVRHPLPYILSLILALS 336
Query: 111 VITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVT 170
+ TQ+N+LN+ALD FNT++V PIYYV FT++ + +S+I+FK+W + I + GFVT
Sbjct: 337 LSTQVNFLNRALDIFNTSLVFPIYYVFFTTVVVTSSIILFKEWYSMSAVDIAGTLSGFVT 396
Query: 171 ILSGTFLLHKTKDAVDGSSASI 192
I+ G F+LH KD +D S AS+
Sbjct: 397 IILGVFMLHAFKD-LDISCASL 417
>sp|Q6NVV3|NIPA3_HUMAN Magnesium transporter NIPA3 OS=Homo sapiens GN=NIPAL1 PE=2 SV=1
Length = 410
Score = 124 bits (310), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 103/159 (64%), Gaps = 4/159 (2%)
Query: 51 ILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVC 110
+ P+ GQT+++VYI +CSL+G+ SV SVK LGIA+K E +P ++ ++++
Sbjct: 227 VAPKKGQTNILVYISICSLIGAFSVSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLS 286
Query: 111 VITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVT 170
V TQ+NYLNKALDTFNT++V+PIYYV FTS+ + S I+F++W I+ + GF T
Sbjct: 287 VTTQINYLNKALDTFNTSLVTPIYYVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFT 346
Query: 171 ILSGTFLLHKTKDA----VDGSSASIQMRMSKHSDENAY 205
I+ G FLLH K+ + +S + + +S + +EN Y
Sbjct: 347 IIIGIFLLHAFKNTDITWSELTSTAKKEAVSLNVNENNY 385
>sp|Q5RDB8|NIPA3_PONAB Magnesium transporter NIPA3 OS=Pongo abelii GN=NIPAL1 PE=2 SV=1
Length = 410
Score = 123 bits (309), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 102/159 (64%), Gaps = 4/159 (2%)
Query: 51 ILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVC 110
+ P+ GQT+++VYI +CSL+G+ SV SVK LGIA+K E +P ++ ++++
Sbjct: 227 VAPKKGQTNILVYISICSLIGAFSVSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLS 286
Query: 111 VITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVT 170
V TQ+NYLNKALDTFNT++V+PIYYV FTS+ + S I+F++W I+ + GF T
Sbjct: 287 VTTQINYLNKALDTFNTSIVTPIYYVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFT 346
Query: 171 ILSGTFLLHKTKDA----VDGSSASIQMRMSKHSDENAY 205
I+ G FLLH K+ + +S + + +S + EN Y
Sbjct: 347 IIIGIFLLHAFKNTDITWSELTSTAKKEAVSLNVSENNY 385
>sp|Q7RTP0|NIPA1_HUMAN Magnesium transporter NIPA1 OS=Homo sapiens GN=NIPA1 PE=1 SV=1
Length = 329
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 78/135 (57%), Gaps = 2/135 (1%)
Query: 51 ILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALK--LTFEGMNQLIYPQTWIFTMIVL 108
I P +G T++MVYI +CSL+GS +V S K +G+A + L +Q + ++
Sbjct: 179 IAPAHGPTNIMVYISICSLLGSFTVPSTKGIGLAAQDILHNNPSSQRALCLCLVLLAVLG 238
Query: 109 VCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGF 168
+I Q Y+NKAL+ F+++V IYYV+FT+L +LAS I+F++W + CGF
Sbjct: 239 CSIIVQFRYINKALECFDSSVFGAIYYVVFTTLVLLASAILFREWSNVGLVDFLGMACGF 298
Query: 169 VTILSGTFLLHKTKD 183
T+ G L+ K+
Sbjct: 299 TTVSVGIVLIQVFKE 313
>sp|Q8BHK1|NIPA1_MOUSE Magnesium transporter NIPA1 OS=Mus musculus GN=Nipa1 PE=1 SV=1
Length = 323
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 78/135 (57%), Gaps = 2/135 (1%)
Query: 51 ILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALK--LTFEGMNQLIYPQTWIFTMIVL 108
I P +G T++MVYI +CSL+GS +V S K +G+A + L +Q + ++
Sbjct: 173 IAPAHGPTNIMVYISICSLLGSFTVPSTKGIGLAAQDILHNNPSSQRALCLCLVLLAVLG 232
Query: 109 VCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGF 168
+I Q Y+NKAL+ F+++V IYYV+FT+L +LAS I+F++W + CGF
Sbjct: 233 CSIIVQFRYINKALECFDSSVFGAIYYVVFTTLVLLASAILFREWSNVGLVDFLGMACGF 292
Query: 169 VTILSGTFLLHKTKD 183
T+ G L+ K+
Sbjct: 293 TTVSVGIVLIQVFKE 307
>sp|Q9H841|NPAL2_HUMAN NIPA-like protein 2 OS=Homo sapiens GN=NIPAL2 PE=2 SV=1
Length = 368
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 79/142 (55%), Gaps = 6/142 (4%)
Query: 45 FCTRRSILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMN--QLIYPQTWI 102
FC G H+++ + + +++ SL+V+SVKA ++ +TF M+ QL YP +I
Sbjct: 193 FCILLYFYKRKGMKHMVILLTLVAILASLTVISVKA--VSGMITFSVMDKMQLTYPIFYI 250
Query: 103 FTMIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIV 162
+I++ + Q+ +LN+A +NT V P+ ++ FT I+A +I ++++ +
Sbjct: 251 MFIIMIASCVFQVKFLNQATKLYNTTTVVPVNHIFFTISAIIAGIIFYQEFLGAPFLTVF 310
Query: 163 TEICG-FVTILSGTFLLHKTKD 183
+ G F++ L G FL+ + ++
Sbjct: 311 IYLFGCFLSFL-GVFLVTRNRE 331
>sp|Q91WC7|NPAL2_MOUSE NIPA-like protein 2 OS=Mus musculus GN=Nipal2 PE=2 SV=1
Length = 383
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
Query: 45 FCTRRSILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFT 104
FC G H++V + + +L+ SL+V+SVKA+ + L+ G QL Y +I
Sbjct: 193 FCILLYFHKRKGMKHIVVLLTLVALLASLTVISVKAVSGMITLSVTGKMQLTYAIFYIML 252
Query: 105 MIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTE 164
+I++ + Q+ +LN+A + + V P+ +V FT+ I+A +I ++++ +
Sbjct: 253 VIMIASCVFQVKFLNQATELYTMTTVVPVNHVFFTTSAIIAGIIFYQEFLGAAFLTVFIY 312
Query: 165 ICG-FVTILSGTFLLHKTKD 183
+ G F++ L G FL+ + ++
Sbjct: 313 LFGCFLSFL-GVFLVTRNRE 331
>sp|Q5RD30|NPAL3_PONAB NIPA-like protein 3 OS=Pongo abelii GN=NIPAL3 PE=2 SV=1
Length = 406
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 63/113 (55%)
Query: 71 GSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVITQMNYLNKALDTFNTAVV 130
GS++V++VKA+ L L+ +G QL YP ++ + ++ + Q +L++A ++++++
Sbjct: 213 GSMTVVTVKAVAGMLVLSIQGNLQLDYPIFYVMFVCMVATAVYQAAFLSQASQMYDSSLI 272
Query: 131 SPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTILSGTFLLHKTKD 183
+ + Y++ T++ I A I + D+ ++ I G + G FL+ + +
Sbjct: 273 ASVGYILSTTIAITAGAIFYLDFIGEDVLHICMFALGCLIAFLGVFLITRNRK 325
>sp|Q6P499|NPAL3_HUMAN NIPA-like protein 3 OS=Homo sapiens GN=NIPAL3 PE=1 SV=1
Length = 406
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 63/113 (55%)
Query: 71 GSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVITQMNYLNKALDTFNTAVV 130
GS++V++VKA+ L L+ +G QL YP ++ + ++ + Q +L++A ++++++
Sbjct: 213 GSMTVVTVKAVAGMLVLSIQGNLQLDYPIFYVMFVCMVATAVYQAAFLSQASQMYDSSLI 272
Query: 131 SPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTILSGTFLLHKTKD 183
+ + Y++ T++ I A I + D+ ++ I G + G FL+ + +
Sbjct: 273 ASVGYILSTTIAITAGAIFYLDFIGEDVLHICMFALGCLIAFLGVFLITRNRK 325
>sp|Q8BGN5|NPAL3_MOUSE NIPA-like protein 3 OS=Mus musculus GN=Nipal3 PE=2 SV=1
Length = 410
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 61/113 (53%)
Query: 71 GSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVITQMNYLNKALDTFNTAVV 130
GS++V++VKA+ L L+ +G QL YP ++ + ++ I Q +L++A ++++++
Sbjct: 217 GSMTVVTVKAVSGMLVLSIQGNLQLDYPIFYVMFVCMVATAIYQATFLSEASQIYDSSLI 276
Query: 131 SPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTILSGTFLLHKTKD 183
+ + Y++ T+ I A I + D+ + I G + G FL+ + +
Sbjct: 277 ASVGYILSTTAAITAGAIFYLDFLGEEALHICMFALGCLIAFLGVFLITRNRK 329
>sp|P22105|TENX_HUMAN Tenascin-X OS=Homo sapiens GN=TNXB PE=1 SV=3
Length = 4289
Score = 33.5 bits (75), Expect = 1.2, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Query: 3 CWFNHNCSTCSSRTCDRICCGSLGSCNGASFSSVCSFGSSCSFCTRRS 50
CW + CS+RTC R C G G C +C G S C RS
Sbjct: 359 CWPGYTGEDCSTRTCPRDCRGR-GRCEDG--ECICDTGYSGDDCGVRS 403
Score = 32.7 bits (73), Expect = 2.2, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Query: 3 CWFNHNCSTCSSRTCDRICCGSLGSC-NGASFSSVCSFGSSCSFCTRRS 50
CW + + C SR C R C G G C NG VC+ G S C RS
Sbjct: 421 CWPGYTGTDCGSRACPRDCRGR-GRCENGV---CVCNAGYSGEDCGVRS 465
>sp|O00322|UPK1A_HUMAN Uroplakin-1a OS=Homo sapiens GN=UPK1A PE=2 SV=1
Length = 258
Score = 30.8 bits (68), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 30 GASFSSVCSFGSSCSFCTRRSILPEYGQTHVMVYIGVCS 68
G SF V SFG + C RRS++ Y ++VYI C+
Sbjct: 71 GFSFFMVASFGVGAALCRRRSMVLTYLVLMLIVYIFECA 109
>sp|P38572|UPK1A_BOVIN Uroplakin-1a OS=Bos taurus GN=UPK1A PE=1 SV=1
Length = 258
Score = 30.4 bits (67), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 30 GASFSSVCSFGSSCSFCTRRSILPEYGQTHVMVYIGVCS 68
G SF V SFG + C RRS++ Y +++YI C+
Sbjct: 71 GFSFFVVASFGVGAALCRRRSMILTYLILMLIIYIFECA 109
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.135 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,114,846
Number of Sequences: 539616
Number of extensions: 2689432
Number of successful extensions: 9453
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 9313
Number of HSP's gapped (non-prelim): 183
length of query: 221
length of database: 191,569,459
effective HSP length: 113
effective length of query: 108
effective length of database: 130,592,851
effective search space: 14104027908
effective search space used: 14104027908
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 59 (27.3 bits)