Query 027613
Match_columns 221
No_of_seqs 136 out of 476
Neff 4.9
Searched_HMMs 13730
Date Mon Mar 25 21:23:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027613.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027613hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pw4a_ f.38.1.1 (A:) Glycerol 35.1 2.6 0.00019 33.5 -1.0 16 47-62 78-93 (447)
2 d1ozbi_ g.74.1.1 (I:) Preprote 21.8 22 0.0016 19.5 1.7 22 6-28 4-25 (26)
3 d1r3jc_ f.14.1.1 (C:) Potassiu 18.4 30 0.0022 23.3 2.3 43 129-179 41-83 (103)
4 d1fjra_ b.102.1.1 (A:) Methuse 15.0 17 0.0013 28.1 0.2 13 11-23 60-72 (188)
5 d1m0ga_ g.46.1.1 (A:) Metallot 10.5 32 0.0023 19.0 0.3 11 12-22 19-29 (30)
6 d2cora2 g.39.1.3 (A:8-42) Pinc 9.6 57 0.0042 18.8 1.3 11 210-220 21-32 (35)
7 d1kcpa_ g.3.6.1 (A:) Conotoxin 8.3 53 0.0039 17.6 0.7 11 10-20 13-23 (27)
8 d1c6sa_ a.3.1.1 (A:) Cytochrom 7.5 41 0.003 21.2 -0.1 10 5-14 10-19 (87)
9 d1wpga4 f.33.1.1 (A:1-124,A:24 7.5 1.5E+02 0.011 24.5 3.8 22 94-115 56-77 (472)
10 d1sisa_ g.3.7.2 (A:) Toxin I5a 7.1 37 0.0027 19.5 -0.4 14 19-32 17-30 (35)
No 1
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=35.10 E-value=2.6 Score=33.55 Aligned_cols=16 Identities=6% Similarity=-0.064 Sum_probs=11.7
Q ss_pred hheeeecccCcceeEE
Q 027613 47 TRRSILPEYGQTHVMV 62 (221)
Q Consensus 47 Li~~~~pr~G~~~ilv 62 (221)
..-+.+.|+|+|.++.
T Consensus 78 ~~G~l~Dr~g~r~~~~ 93 (447)
T d1pw4a_ 78 IMGSVSDRSNPRVFLP 93 (447)
T ss_dssp HHHHHHHHSCHHHHHH
T ss_pred HHHHHHHHcCchHHHH
Confidence 4457788899998654
No 2
>d1ozbi_ g.74.1.1 (I:) Preprotein translocase SecA C-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=21.82 E-value=22 Score=19.46 Aligned_cols=22 Identities=32% Similarity=0.572 Sum_probs=16.6
Q ss_pred cCCCCCCCCccccceeccCCCcc
Q 027613 6 NHNCSTCSSRTCDRICCGSLGSC 28 (221)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~ 28 (221)
|..|. |.|..=-.-|||.+.+.
T Consensus 4 N~~Cp-CgSgkkyK~C~G~~~A~ 25 (26)
T d1ozbi_ 4 NEPCP-CGSGKKYKHCHGSRVAX 25 (26)
T ss_dssp TSBCT-TTCSSBGGGTTTCCCC-
T ss_pred CCcCC-CCCCccHHHcCCccccc
Confidence 56676 88888788899988653
No 3
>d1r3jc_ f.14.1.1 (C:) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]}
Probab=18.37 E-value=30 Score=23.34 Aligned_cols=43 Identities=12% Similarity=0.246 Sum_probs=28.0
Q ss_pred eeccchhhhhHHHHhhhhhhhhhccCCCCchhHHHHHHHHHHhhheeeEec
Q 027613 129 VVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTILSGTFLLH 179 (221)
Q Consensus 129 iVvPiyyv~fTt~tIi~s~IlF~Ef~~~s~~~ii~f~~G~lii~~GV~LLs 179 (221)
..-.+|+.+-|..++ +|.++.|....+=+++++..+.|+.+++
T Consensus 41 ~~~aly~~~vT~tTv--------GYGDi~P~t~~gr~~~~~~~~~Gi~~~~ 83 (103)
T d1r3jc_ 41 YPRALWWSVETATTV--------GYGDLYPVTLWGRCVAVVVMVAGITSFG 83 (103)
T ss_dssp HHHHHHHHHHHHTTC--------CCSSSCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhheeeeccc--------ccCccccCChhHHHHHHHHHHHHHHHHH
Confidence 334466666666553 4556677777777777777777776543
No 4
>d1fjra_ b.102.1.1 (A:) Methuselah ectodomain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=14.95 E-value=17 Score=28.14 Aligned_cols=13 Identities=38% Similarity=1.229 Sum_probs=10.0
Q ss_pred CCCCccccceecc
Q 027613 11 TCSSRTCDRICCG 23 (221)
Q Consensus 11 ~~~~~~~~~~~~~ 23 (221)
-|.-|.|-|+||-
T Consensus 60 vC~lkpCIR~CCp 72 (188)
T d1fjra_ 60 VCKLKPCVRFCCP 72 (188)
T ss_dssp GGGTSCEEEBSSC
T ss_pred EEecCccceEecC
Confidence 4777888888883
No 5
>d1m0ga_ g.46.1.1 (A:) Metallothionein {Black rockcod (Notothenia coriiceps) [TaxId: 8208]}
Probab=10.51 E-value=32 Score=18.97 Aligned_cols=11 Identities=55% Similarity=1.645 Sum_probs=8.5
Q ss_pred CCCccccceec
Q 027613 12 CSSRTCDRICC 22 (221)
Q Consensus 12 ~~~~~~~~~~~ 22 (221)
|...|||.-||
T Consensus 19 ckgktcdtscc 29 (30)
T d1m0ga_ 19 CKGKTCDTSCC 29 (30)
T ss_dssp GGTSSSSTTTT
T ss_pred ecCCccccccc
Confidence 45578998887
No 6
>d2cora2 g.39.1.3 (A:8-42) Pinch (particularly interesting new Cys-His) protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.56 E-value=57 Score=18.82 Aligned_cols=11 Identities=36% Similarity=0.709 Sum_probs=8.1
Q ss_pred Cccc-ccCCCCC
Q 027613 210 MPLR-RQDNMRP 220 (221)
Q Consensus 210 ~~l~-r~~~~~~ 220 (221)
-||+ |.|.|.|
T Consensus 21 ~pL~Fr~d~YHp 32 (35)
T d2cora2 21 QPLIFKNDPYHP 32 (35)
T ss_dssp CCCCCSSSCCCT
T ss_pred CcceecCCCCCC
Confidence 5677 7788877
No 7
>d1kcpa_ g.3.6.1 (A:) Conotoxin {Conus purpurascens, kappa-pVIIa [TaxId: 41690]}
Probab=8.33 E-value=53 Score=17.58 Aligned_cols=11 Identities=45% Similarity=1.165 Sum_probs=8.4
Q ss_pred CCCCCccccce
Q 027613 10 STCSSRTCDRI 20 (221)
Q Consensus 10 ~~~~~~~~~~~ 20 (221)
..|-||.|.|+
T Consensus 13 ddccsrkcnrf 23 (27)
T d1kcpa_ 13 DDCCSRKCNRF 23 (27)
T ss_dssp CCBTTSCBCTT
T ss_pred HHHHHHHhhhh
Confidence 45778999885
No 8
>d1c6sa_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Cyanobacterium (Synechococcus elongatus) [TaxId: 32046]}
Probab=7.48 E-value=41 Score=21.23 Aligned_cols=10 Identities=40% Similarity=1.112 Sum_probs=7.7
Q ss_pred ccCCCCCCCC
Q 027613 5 FNHNCSTCSS 14 (221)
Q Consensus 5 ~~~~~~~~~~ 14 (221)
|+.||..|-.
T Consensus 10 y~~~Ca~CHg 19 (87)
T d1c6sa_ 10 FSGNCAACHM 19 (87)
T ss_dssp HTTTGGGGCT
T ss_pred HHHHChhhhh
Confidence 5778988874
No 9
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=7.47 E-value=1.5e+02 Score=24.54 Aligned_cols=22 Identities=9% Similarity=0.046 Sum_probs=14.7
Q ss_pred ccchhHHHHHHHHHHHHHHHHH
Q 027613 94 QLIYPQTWIFTMIVLVCVITQM 115 (221)
Q Consensus 94 qf~~~~tyv~li~lvv~av~Ql 115 (221)
||++|..+++++..+++.++..
T Consensus 56 ~~~~~~~~iL~~aa~ls~~~~~ 77 (472)
T d1wpga4 56 QFEDLLVRILLLAACISFVLAW 77 (472)
T ss_dssp HTCSHHHHHHHHHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHHHHHHH
Confidence 4667777777777777666543
No 10
>d1sisa_ g.3.7.2 (A:) Toxin I5a {Scorpion (Buthus eupeus) [TaxId: 34648]}
Probab=7.07 E-value=37 Score=19.48 Aligned_cols=14 Identities=50% Similarity=1.191 Sum_probs=11.3
Q ss_pred ceeccCCCcccCcc
Q 027613 19 RICCGSLGSCNGAS 32 (221)
Q Consensus 19 ~~~~~~l~~~~~~~ 32 (221)
|-|||.-|.+-||-
T Consensus 17 r~ccgg~gkcfgpq 30 (35)
T d1sisa_ 17 RDCCGGNGKCFGPQ 30 (35)
T ss_dssp HHHTTTCEEEETTE
T ss_pred HHHhCCCccccCcc
Confidence 56899999888773
Done!