BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027618
(221 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54120|AIG1_ARATH Protein AIG1 OS=Arabidopsis thaliana GN=AIG1 PE=2 SV=1
Length = 353
Score = 202 bits (513), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/164 (59%), Positives = 120/164 (73%), Gaps = 1/164 (0%)
Query: 8 DDWELTSPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKD 67
D++ + P E +VLVGRTGNGKSATGNSI+ + FKS+ SSGVT C + V +
Sbjct: 32 DEFSASQPHPVE-NIVLVGRTGNGKSATGNSIVRSKVFKSKTKSSGVTMECHAVKAVTPE 90
Query: 68 GQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHS 127
G ++NVIDTPGLFD S +EF+GKEIVKC+ +A G+HAVL+V SVR+R SQEEE L +
Sbjct: 91 GPILNVIDTPGLFDLSVSAEFIGKEIVKCLTLADGGLHAVLLVLSVRTRISQEEEMVLST 150
Query: 128 LQTLFGKKIFDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKK 171
LQ LFG KI DY+IVVFTGGD LED+ TLEDYLG P LK+
Sbjct: 151 LQVLFGSKIVDYLIVVFTGGDVLEDDGMTLEDYLGDNMPDFLKR 194
>sp|O81025|P2A03_ARATH Putative protein PHLOEM PROTEIN 2-LIKE A3 OS=Arabidopsis thaliana
GN=PP2A3 PE=4 SV=1
Length = 463
Score = 183 bits (465), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 82/152 (53%), Positives = 114/152 (75%)
Query: 20 RTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGL 79
+ +VLVGRTGNGKS+TGN++LG + FKS+ + GVT CEM R ++DG ++NVIDTPGL
Sbjct: 6 KNIVLVGRTGNGKSSTGNTLLGTKQFKSKNQAKGVTMICEMYRAAIQDGPIINVIDTPGL 65
Query: 80 FDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDY 139
D + + EI+ C+ MA++GIHAVL+V S R R S+EEE+ +++LQ +FG +I DY
Sbjct: 66 CDSFVPGDDISNEIINCLTMAEEGIHAVLLVLSARGRISKEEESTVNTLQCIFGSQILDY 125
Query: 140 MIVVFTGGDELEDNDETLEDYLGRECPKPLKK 171
IVVFTGGD+LE++D+TL+DY CP+ L K
Sbjct: 126 CIVVFTGGDDLEEDDQTLDDYFRAGCPEFLTK 157
>sp|Q9NUV9|GIMA4_HUMAN GTPase IMAP family member 4 OS=Homo sapiens GN=GIMAP4 PE=1 SV=1
Length = 329
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 100/156 (64%), Gaps = 5/156 (3%)
Query: 15 PSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVI 74
P N + +VLVG+TG GKSATGNSILGR+ F S ++ +T CE + + K+ ++V V+
Sbjct: 26 PRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWKETELV-VV 84
Query: 75 DTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGK 134
DTPG+FD + KEI++CI + G HA+L+V + R+++EE A + +FG+
Sbjct: 85 DTPGIFDTEVPNAETSKEIIRCILLTSPGPHALLLVVPL-GRYTEEEHKATEKILKMFGE 143
Query: 135 KIFDYMIVVFTGGDELEDNDETLEDYLGRECPKPLK 170
+ +MI++FT D+L D + L DYL RE P+ ++
Sbjct: 144 RARSFMILIFTRKDDLGDTN--LHDYL-REAPEDIQ 176
>sp|Q8K3K9|GIMA4_RAT GTPase IMAP family member 4 OS=Rattus norvegicus GN=Gimap4 PE=2
SV=1
Length = 310
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 5/158 (3%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
+VL+G+TG GKS+TGNSILGR+AF S + +T CE ++ DG+ + V+DTPG+FD
Sbjct: 33 IVLLGKTGAGKSSTGNSILGRKAFLSGICAKSITKVCEKGVSIW-DGKELVVVDTPGIFD 91
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 141
KEI +C+ + G HA+L+V + ++ EE A L ++F KK +MI
Sbjct: 92 TEVPDADTQKEITRCVALTSPGPHALLLVIPLGC-YTVEEHKATRKLLSMFEKKARRFMI 150
Query: 142 VVFTGGDELEDNDETLEDYLGRECPKPLKKGATKLRDQ 179
++ T D+LED D + +YL P+ L++ + R++
Sbjct: 151 LLLTRKDDLEDTD--IHEYL-ETAPEVLQELIYEFRNR 185
>sp|Q8K349|GIMA6_MOUSE GTPase IMAP family member 6 OS=Mus musculus GN=Gimap6 PE=2 SV=1
Length = 305
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 91/140 (65%), Gaps = 6/140 (4%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++LVG+TG+GKSATGNSILGR+AF+S+ S+ VT+T + + T +G+ + VIDTP +F
Sbjct: 106 LLLVGKTGSGKSATGNSILGRQAFESKISARPVTTTFQ-KGTREFEGKELEVIDTPDIFS 164
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 141
E K+I C +A G HAVL+V V R++ E++A LQ +FG I Y I
Sbjct: 165 PQNQPEATAKKI--CDLLASPGPHAVLLVIQV-GRYTAEDQAVARCLQEIFGNTILAYTI 221
Query: 142 VVFTGGDELEDNDETLEDYL 161
+VFT ++L + +LE+Y+
Sbjct: 222 LVFTRKEDLAEG--SLEEYI 239
>sp|Q99JY3|GIMA4_MOUSE GTPase IMAP family member 4 OS=Mus musculus GN=Gimap4 PE=1 SV=1
Length = 219
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 87/146 (59%), Gaps = 5/146 (3%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
+VL+G+TG GKS+TGNSILG + F S + +T CE +R DG+ + V+DTPG+FD
Sbjct: 33 IVLLGKTGAGKSSTGNSILGEKVFNSGICAKSITKVCE-KRVSTWDGKELVVVDTPGIFD 91
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 141
+EI + + + G HA+L+V + R++ EE A + +FGK+ +MI
Sbjct: 92 TEVPDADTQREITRYVALTSPGPHALLLVVPL-GRYTVEEHKATQKILDMFGKQARRFMI 150
Query: 142 VVFTGGDELEDNDETLEDYLGRECPK 167
++ T D+LED D + +YL + PK
Sbjct: 151 LLLTRKDDLEDTD--IHEYL-EKAPK 173
>sp|Q8NHV1|GIMA7_HUMAN GTPase IMAP family member 7 OS=Homo sapiens GN=GIMAP7 PE=2 SV=1
Length = 300
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 82/130 (63%), Gaps = 2/130 (1%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
+VLVG+TG+GKSAT N+ILG F SR ++ VT C+ + G+ + V+DTPGLFD
Sbjct: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQ-GRDLLVVDTPGLFD 69
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 141
+ KEI +CI + G HA+++V + R+++EE+ + ++ +FGK +M+
Sbjct: 70 TKESLDTTCKEISRCIISSCPGPHAIVLVL-LLGRYTEEEQKTVALIKAVFGKSAMKHMV 128
Query: 142 VVFTGGDELE 151
++FT +ELE
Sbjct: 129 ILFTRKEELE 138
>sp|Q5FVN6|GIMA6_RAT GTPase IMAP family member 6 OS=Rattus norvegicus GN=Gimap6 PE=2
SV=1
Length = 304
Score = 97.8 bits (242), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 86/140 (61%), Gaps = 6/140 (4%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++LVG+TG+GKSATGNSILGR+ F+S+ S+ VT + L +G+ + VIDTP +
Sbjct: 105 LLLVGKTGSGKSATGNSILGRQVFESKISARPVTMAFQKGSREL-EGKELEVIDTPDILS 163
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 141
E K+I C +A G HAVL+V V R++ E++ A LQ +FG I Y I
Sbjct: 164 PQNQPEATAKKI--CDILASPGPHAVLLVIQV-GRYTTEDQEAARCLQEIFGNGILAYTI 220
Query: 142 VVFTGGDELEDNDETLEDYL 161
+VFT +EL + +LE+Y+
Sbjct: 221 LVFTRKEELAEG--SLEEYI 238
>sp|Q75N62|GIMA8_MOUSE GTPase IMAP family member 8 OS=Mus musculus GN=Gimap8 PE=2 SV=1
Length = 688
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 91/155 (58%), Gaps = 9/155 (5%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLF 80
++L+GR+G GKSATGN+ILGR AF S+ + VTS+ + + L D Q V V+DTP
Sbjct: 477 NIILLGRSGAGKSATGNTILGRSAFFSQLRAQPVTSSSQSGKRTL-DWQDVVVVDTPSFI 535
Query: 81 DFSAGSE----FVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKI 136
+ G+E + +EI C+ + ++G+ ++V + RF+QE+E + L+ F + I
Sbjct: 536 Q-TPGTEKDPSRLKEEIHHCLSLCEEGMKIFVLVLQL-GRFTQEDEVVVEQLEASFEENI 593
Query: 137 FDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKK 171
YMIV+FT ++L D D L DY K LKK
Sbjct: 594 MKYMIVLFTRKEDLGDGD--LHDYTNNTKNKALKK 626
Score = 87.4 bits (215), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 85/140 (60%), Gaps = 4/140 (2%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++L+G+ G GKSATGN+ILG+ F+S+ S VT C+ + ++ QV+ VIDTP LF
Sbjct: 51 LLLLGKQGAGKSATGNTILGKAVFESKFSDHMVTDRCQSESVSVRGKQVI-VIDTPDLFS 109
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 141
+ SE + + +C+ + D H VL++ + +++E+ + + G K + +MI
Sbjct: 110 SLSCSEVRQQNLKQCLELLADD-HCVLLLVTPIGHYTEEDRETIEGIWGKIGPKAYRHMI 168
Query: 142 VVFTGGDELEDNDETLEDYL 161
VVFT DEL ++++L +Y+
Sbjct: 169 VVFTREDEL--DEDSLWNYI 186
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 8/138 (5%)
Query: 15 PSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVI 74
P E V+L+G+ G GKSA GNSILG++ FK++ S + + + G+ V +I
Sbjct: 280 PDMPELRVLLMGKRGVGKSAAGNSILGKQVFKTQFSEKQRVTKAFASHSRVWQGKKVLII 339
Query: 75 DTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGK 134
D+P + + V G HA L+V + S +++ ++ +FG+
Sbjct: 340 DSPEISSWKLDESAVKNHTFP-------GPHAFLLVTPLGSSLKSDDD-VFSIIKRIFGE 391
Query: 135 KIFDYMIVVFTGGDELED 152
K + IV+FT ++ ED
Sbjct: 392 KFTKFTIVLFTRKEDFED 409
>sp|Q96F15|GIMA5_HUMAN GTPase IMAP family member 5 OS=Homo sapiens GN=GIMAP5 PE=1 SV=1
Length = 307
Score = 94.0 bits (232), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 102/171 (59%), Gaps = 16/171 (9%)
Query: 7 DDDWELTSPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK 66
+D+ T P+ ++LVG+TG GKSATGNSILG+ F+S+ + VT TC++ +T
Sbjct: 18 EDNLSATPPA---LRIILVGKTGCGKSATGNSILGQPVFESKLRAQSVTRTCQV-KTGTW 73
Query: 67 DGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALH 126
+G+ V V+DTP +F+ A ++ + K I C ++ G H +L+V + RF+ ++ A+
Sbjct: 74 NGRKVLVVDTPSIFESQADTQELYKNIGDCYLLSAPGPHVLLLVIQL-GRFTAQDTVAIR 132
Query: 127 SLQTLFGKKIFDYMIVVFT-----GGDELED-----NDETLEDYLGRECPK 167
++ +FG +++++FT GG L+D ++ +L+D L REC +
Sbjct: 133 KVKEVFGTGAMRHVVILFTHKEDLGGQALDDYVANTDNCSLKD-LVRECER 182
>sp|Q4KLG2|GIMA8_RAT GTPase IMAP family member 8 OS=Rattus norvegicus GN=Gimap8 PE=2
SV=1
Length = 688
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 113/208 (54%), Gaps = 24/208 (11%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLF 80
++L+GR+G GKSATGN+ILGR AF S+ + VTS + R L D Q + V+DTP L
Sbjct: 476 NIILLGRSGVGKSATGNTILGRPAFVSQLRAQPVTSRSQSGRRTL-DWQDIVVVDTPSLN 534
Query: 81 DFSAGSE----FVGKEIVKC-IGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKK 135
S G+E + KEI +C + ++G+ ++VF + RF+QE+EA + L+ F +
Sbjct: 535 QMS-GTEKNPAQLKKEIKQCLLQNCEEGMKVFVLVFQL-GRFTQEDEAVVEQLEASFEEN 592
Query: 136 IFDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKKGATKLR-------------DQQFE 182
I YMIV+FT ++L D D L D+ K LK+ K + DQ+ +
Sbjct: 593 IMKYMIVLFTRKEDLGDGD--LYDFTNNTKNKVLKRIFKKCKGRVCAFNNKETGEDQETQ 650
Query: 183 VDSLKGYSKREISELKEQMHKSYEDQLK 210
V +L + ++ ++ S+ DQLK
Sbjct: 651 VKALLTIAN-DLKRSYDEHSTSWMDQLK 677
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 90/150 (60%), Gaps = 7/150 (4%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++L+G+ G GKSATGN+ILG+ F+SR S VT C+ + ++ QV+ VIDTP LF
Sbjct: 51 LLLLGKQGAGKSATGNTILGKAVFESRFSHHMVTKRCQSESVSVRGKQVI-VIDTPDLFS 109
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 141
E + + +C+ + D VL++ + ++E++ + +Q +FG + + +MI
Sbjct: 110 SLGCPEVQQQNLRQCLDLLADPY--VLLLVTPIGHSTEEDKKTIEGIQGVFGPQAYRHMI 167
Query: 142 VVFTGGDELEDNDETLEDYLGRECPKPLKK 171
VVFT DEL ++TL++++ E K LKK
Sbjct: 168 VVFTREDEL--GEDTLQNHI--ESKKYLKK 193
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
Query: 10 WELTSPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQ 69
W+ +P E V+L+G+ G GKSA GNSILG++ FK++ S + + L + +
Sbjct: 277 WDRDTP---ELRVLLMGKRGVGKSAAGNSILGKQVFKTQFSEKQRVTEAFASHSRLWNQK 333
Query: 70 VVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQ 129
+ID+P + + V + G HA L+V + S + ++ ++
Sbjct: 334 KFLIIDSPEISSWKLDESDVKEHTFP-------GPHAFLLVTPLGSSL-KSGDSVFSIIK 385
Query: 130 TLFGKKIFDYMIVVFTGGDELEDND 154
+FG+K + I++FT ++ E D
Sbjct: 386 RIFGEKFIKFTIILFTRKEDFEGQD 410
>sp|Q8WWP7|GIMA1_HUMAN GTPase IMAP family member 1 OS=Homo sapiens GN=GIMAP1 PE=1 SV=1
Length = 306
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 116/228 (50%), Gaps = 31/228 (13%)
Query: 20 RTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGL 79
R ++LVGRTG GKSATGNSILG+R F SR ++ VT C + D V V+DTP +
Sbjct: 28 RRLILVGRTGAGKSATGNSILGQRRFFSRLGATSVTRACTTG-SRRWDKCHVEVVDTPDI 86
Query: 80 FDFSAGSEFVG-KEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFD 138
F G +E C ++ G HA+L+V + RF+ +++ A+ ++ +FG+ +
Sbjct: 87 FSSQVSKTDPGCEERGHCYLLSAPGPHALLLVTQL-GRFTAQDQQAVRQVRDMFGEDVLK 145
Query: 139 YMIVVFTGGDELEDNDETLEDYLGRECPKPLKKGATKL-------------RDQQFEVDS 185
+M++VFT ++L +L DY+ + L++ + R+Q+ +V+
Sbjct: 146 WMVIVFTRKEDLAGG--SLHDYVSNTENRALRELVAECGGRVCAFDNRATGREQEAQVEQ 203
Query: 186 LKG------------YSKREISELKEQMHKS-YEDQLKRITEMVPVMI 220
L G + E+ EL + + + E++L+R+ E V +
Sbjct: 204 LLGMVEGLVLEHKGAHYSNEVYELAQVLRWAGPEERLRRVAERVAARV 251
>sp|Q6P9H5|GIMA6_HUMAN GTPase IMAP family member 6 OS=Homo sapiens GN=GIMAP6 PE=2 SV=1
Length = 292
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 86/140 (61%), Gaps = 5/140 (3%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++L+G+TG+GKSATGNSILGR F+S+ S+ VT T + +R+ G+ + VIDTP +
Sbjct: 43 LILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQ-RRSREWAGKELEVIDTPNILS 101
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 141
E V I + I ++ G HAVL+V + RF+ E++ + LQ +FG + + I
Sbjct: 102 PQVSPE-VADAICQAIVLSAPGPHAVLLVTQL-GRFTDEDQQVVRRLQEVFGVGVLGHTI 159
Query: 142 VVFTGGDELEDNDETLEDYL 161
+VFT ++L +LEDY+
Sbjct: 160 LVFTRKEDLAGG--SLEDYV 177
>sp|P70224|GIMA1_MOUSE GTPase IMAP family member 1 OS=Mus musculus GN=Gimap1 PE=1 SV=3
Length = 277
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 86/141 (60%), Gaps = 5/141 (3%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++LVGRTG GKSATGNSILG++ F SR + VT +C + + + G V V+DTP +F
Sbjct: 6 LILVGRTGTGKSATGNSILGQKCFLSRLGAVPVTRSCTLA-SRMWAGWQVEVVDTPDIFS 64
Query: 82 FSAGSEFVGK-EIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYM 140
G E +C ++ G HA+L+V + RF+ ++ AL +++ LFGK++
Sbjct: 65 SEIPRTDPGCVETARCFVLSAPGPHALLLVTQL-GRFTMQDSQALAAVKRLFGKQVMART 123
Query: 141 IVVFTGGDELEDNDETLEDYL 161
+VVFT ++L ++L+DY+
Sbjct: 124 VVVFTRQEDLA--GDSLQDYV 142
>sp|Q9UG22|GIMA2_HUMAN GTPase IMAP family member 2 OS=Homo sapiens GN=GIMAP2 PE=1 SV=2
Length = 337
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 91/158 (57%), Gaps = 4/158 (2%)
Query: 14 SPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNV 73
S E ++LVG+TG GKSA GNSIL ++AF+S+ S +T TC + + ++V +
Sbjct: 17 CASRSELRIILVGKTGTGKSAAGNSILRKQAFESKLGSQTLTKTCSKSQGSWGNREIV-I 75
Query: 74 IDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFG 133
IDTP +F + E + KE+ +C ++ G H +L+V + R++ +++ A ++ +FG
Sbjct: 76 IDTPDMFSWKDHCEALYKEVQRCYLLSAPGPHVLLLVTQL-GRYTSQDQQAAQRVKEIFG 134
Query: 134 KKIFDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKK 171
+ + IV+FT ++L N +L DY+ K L K
Sbjct: 135 EDAMGHTIVLFTHKEDL--NGGSLMDYMHDSDNKALSK 170
>sp|Q8ND71|GIMA8_HUMAN GTPase IMAP family member 8 OS=Homo sapiens GN=GIMAP8 PE=1 SV=2
Length = 665
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 93/159 (58%), Gaps = 14/159 (8%)
Query: 19 ERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPG 78
E ++L+G+ +GKSATGN+ILG+ FKS+ S V C+ + VL++ +VV VIDTP
Sbjct: 10 ELRLLLLGKCRSGKSATGNAILGKHVFKSKFSDQTVIKMCQRESWVLRERKVV-VIDTPD 68
Query: 79 LFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFD 138
LF A +E + I C+ ++ +HA+L+V ++ F++E+E +Q +FG +
Sbjct: 69 LFSSIACAEDKQRNIQHCLELSAPSLHALLLVIAI-GHFTREDEETAKGIQQVFGAEARR 127
Query: 139 YMIVVFTGGDE---------LEDN---DETLEDYLGREC 165
++I+VFT D+ +E N + ++DY GR C
Sbjct: 128 HIIIVFTRKDDLGDDLLQDFIEKNKPLKQLVQDYEGRYC 166
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 86/154 (55%), Gaps = 7/154 (4%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPG-- 78
+VLVGR+G GKSATGNSILG F SR + VT T + R DGQ V V+DTP
Sbjct: 440 NIVLVGRSGTGKSATGNSILGSLVFTSRLRAQPVTKTSQSGRRTW-DGQEVVVVDTPSFN 498
Query: 79 -LFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIF 137
+ D + +E+ +C+ + G ++VF + RF++E++ A+ L+ +FG
Sbjct: 499 QMLDVEKDPSRLEEEVKRCLSCCEKGDTFFVLVFQL-GRFTEEDKTAVAKLEAIFGADFT 557
Query: 138 DYMIVVFTGGDELEDNDETLEDYLGRECPKPLKK 171
Y I++FT ++L + LED++ K L++
Sbjct: 558 KYAIMLFTRKEDLGAGN--LEDFMKNSDNKALRR 589
Score = 80.5 bits (197), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 78/141 (55%), Gaps = 9/141 (6%)
Query: 14 SPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNV 73
+P E TV+LVG+ G GKSA GNSILGR+AF++ S VT + + + + V++
Sbjct: 242 NPGTSELTVLLVGKRGAGKSAAGNSILGRQAFQTGFSEQSVTQSFLSESRSWRKKK-VSI 300
Query: 74 IDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFG 133
ID P + V K I G HA L+V + +++ +EA L ++Q FG
Sbjct: 301 IDAPDISSLKNIDSEVRKHIC-------TGPHAFLLVTPL-GFYTKNDEAVLSTIQNNFG 352
Query: 134 KKIFDYMIVVFTGGDELEDND 154
+K F+YMI++ T ++L D D
Sbjct: 353 EKFFEYMIILLTRKEDLGDQD 373
>sp|Q8BWF2|GIMA5_MOUSE GTPase IMAP family member 5 OS=Mus musculus GN=Gimap5 PE=2 SV=1
Length = 308
Score = 90.5 bits (223), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 90/140 (64%), Gaps = 4/140 (2%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++LVG++G GKSATGNSIL R AF+SR VT T + + T +G+ + V+DTP +F+
Sbjct: 29 ILLVGKSGCGKSATGNSILRRPAFQSRLRGQSVTRTSQAE-TGTWEGRSILVVDTPPIFE 87
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 141
A ++ + K+I C + G H +L+V + RF+ E+ A+ ++ +FG + +MI
Sbjct: 88 SKAQNQDMDKDIGDCYLLCAPGPHVLLLVTQL-GRFTAEDAMAVRMVKEVFGVGVMRHMI 146
Query: 142 VVFTGGDELEDNDETLEDYL 161
V+FT ++LE +++LE+++
Sbjct: 147 VLFTRKEDLE--EKSLEEFV 164
>sp|Q8K3L6|GIMA5_RAT GTPase IMAP family member 5 OS=Rattus norvegicus GN=Gimap5 PE=2
SV=1
Length = 326
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 86/140 (61%), Gaps = 4/140 (2%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++LVG++G GKSATGNSIL R AF+SR VT T + + +G+ V+DTP +F+
Sbjct: 47 ILLVGKSGCGKSATGNSILRRPAFESRLRGQSVTRTSQAEMGTW-EGRSFLVVDTPPIFE 105
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 141
++ + K+I C M G H +L+V + R++ E+ A+ ++ +FG + YMI
Sbjct: 106 SKIQNQDMDKDIGNCYLMCAPGPHVLLLVTQL-GRYTVEDAMAVRMVKQIFGVGVMRYMI 164
Query: 142 VVFTGGDELEDNDETLEDYL 161
V+FT ++L DE+LE+++
Sbjct: 165 VLFTHKEDLA--DESLEEFV 182
>sp|Q99MI6|GIMA3_MOUSE GTPase IMAP family member 3 OS=Mus musculus GN=Gimap3 PE=1 SV=2
Length = 301
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 89/140 (63%), Gaps = 4/140 (2%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++LVG++G GKSATGNS+L R AF+SR VT T + + T +G+ + V+DTP +F+
Sbjct: 25 ILLVGKSGCGKSATGNSLLRRPAFESRLRGQSVTRTSQAE-TGTWEGRSILVVDTPPIFE 83
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 141
A ++ + K+I C + G H +L+V + RF+ E+ A+ ++ +FG + +MI
Sbjct: 84 SKAQNQDMDKDIGDCYLLCAPGPHVLLLVTQL-GRFTAEDVMAVRMVKEVFGVGVMRHMI 142
Query: 142 VVFTGGDELEDNDETLEDYL 161
V+FT ++L +++LE+++
Sbjct: 143 VLFTRKEDL--AEKSLEEFV 160
>sp|A5PKB7|GIMA6_BOVIN GTPase IMAP family member 6 OS=Bos taurus GN=GIMAP6 PE=2 SV=1
Length = 341
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 84/144 (58%), Gaps = 12/144 (8%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++LVG++G+GKSATGNSILGRR F+S+ S+ VT + Q +G+ + VIDTP +
Sbjct: 96 LILVGKSGSGKSATGNSILGRRVFESKLSARPVTQAFQ-QGCRAWEGRELQVIDTPDILS 154
Query: 82 FSAGSEFVGKEIVKCIGMAKDGI----HAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIF 137
A G + +G A G +AVL+V + RF++E++ L+ +FGK I
Sbjct: 155 PWA----AGWATAQGVGEAGTGSLPKQYAVLLVTQL-GRFTEEDQQVAGRLEEVFGKGIL 209
Query: 138 DYMIVVFTGGDELEDNDETLEDYL 161
I+VFT ++L + +LE YL
Sbjct: 210 ARTILVFTRKEDL--DGRSLETYL 231
>sp|E9PW74|GIMD1_MOUSE GTPase IMAP family member GIMD1 OS=Mus musculus GN=Gimd1 PE=3 SV=1
Length = 217
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 13/154 (8%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQV---------- 70
+ + GRT +GKS+ GN +LG F S + VT C + R+ G +
Sbjct: 10 NLAVFGRTQSGKSSAGNVLLGSADFYSSFAPGSVTKECSLGRSCHLHGFMRRGGQEISLQ 69
Query: 71 VNVIDTPGLFDFSAGSEFVGKEIVKCI--GMAKDGIH-AVLVVFSVRSRFSQEEEAALHS 127
+ V+DTPG + V +E+ K + ++G+H A+LV + F QE A+
Sbjct: 70 IQVLDTPGYPHSKLSTRCVKQEVKKALLHHFGQEGLHLALLVQRADVPFFGQEASNAVQL 129
Query: 128 LQTLFGKKIFDYMIVVFTGGDELEDNDETLEDYL 161
+Q L G +YM V+FT +ELE+ + E+YL
Sbjct: 130 MQELLGDSCKNYMAVLFTHAEELEEAGLSEEEYL 163
>sp|P0DJR0|GIMD1_HUMAN GTPase IMAP family member GIMD1 OS=Homo sapiens GN=GIMD1 PE=2 SV=1
Length = 217
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 12 LTSPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTV------- 64
+T P+ + L G T +GKS+ GN +LG F S + VT+ C + R+
Sbjct: 1 MTDPNKMIINLALFGMTQSGKSSAGNILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMR 60
Query: 65 ---LKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIG--MAKDGIHAVLVVFSVRSRFS- 118
L+ V V+DTPG ++V +E+ + + + G+H L+V F
Sbjct: 61 RGGLEVALQVQVLDTPGYPHSRLSKKYVKQEVKEALAHHFGQGGLHLALLVQRADVPFCG 120
Query: 119 QEEEAALHSLQTLFGKKIFDYMIVVFTGGDELEDNDETLEDYL 161
QE + +Q L G +Y ++FT +++E+ T + YL
Sbjct: 121 QEVTDPVQMIQELLGHAWMNYTAILFTHAEKIEEAGLTEDKYL 163
>sp|B0BMZ3|GIMD1_RAT GTPase IMAP family member GIMD1 OS=Rattus norvegicus GN=Gimd1 PE=2
SV=1
Length = 216
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQV---------- 70
+ ++G+T +GKS+ GN +LG F SR + VT C + R+ G +
Sbjct: 9 NLAVLGKTQSGKSSAGNVLLGSADFYSRFAPGSVTKDCSLGRSCHIHGFMRRGGHEISLQ 68
Query: 71 VNVIDTPGLFDFSAGSEFVGKEIVKCI--GMAKDGIHAVLVVFSV-RSRFSQEEEAALHS 127
+ V+DTPG + V +E+ K + ++G+H L+V F QE ++
Sbjct: 69 IQVLDTPGYPHSKLSTRCVKQEVKKALEHHFGQEGLHLALLVHRADMPFFGQEASDSVQL 128
Query: 128 LQTLFGKKIFDYMIVVFTGGDELEDNDETLEDYL 161
+Q L G +Y ++FT +++++ + E+YL
Sbjct: 129 IQELLGDSWKNYTAILFTHAEKIKEAGLSEEEYL 162
>sp|G3MZQ6|GIMD1_BOVIN GTPase IMAP family member GIMD1 OS=Bos taurus GN=GIMD1 PE=3 SV=1
Length = 216
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRT------VLKDGQ----V 70
+ L G T +GKS+ GN ILG F S + VT C + R+ + + GQ
Sbjct: 9 NLALFGMTQSGKSSAGNIILGSTDFHSSFAPCSVTRDCSLGRSCHFRSFMRRGGQEVTLQ 68
Query: 71 VNVIDTPGLFDFSAGSEFVGKEIVKCIG--MAKDGIHAVLVVFSVRSRFS-QEEEAALHS 127
V V+DTPG + V +E+ + + ++G+H L+V QEE + +
Sbjct: 69 VQVLDTPGYPHSRLSKKHVRQEVREALAHHFGQEGLHLALLVQRADVPLCGQEESSPVQM 128
Query: 128 LQTLFGKKIFDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKK 171
+Q L G +Y ++FT +++E+ ++YL RE + L K
Sbjct: 129 IQELLGHTWMNYTAILFTHAEKIEEAGFNEDEYL-REASETLLK 171
>sp|Q9LVT3|DRL38_ARATH Probable disease resistance protein At5g47260 OS=Arabidopsis
thaliana GN=At5g47260 PE=3 SV=2
Length = 948
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 12 LTSPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVV 71
LTS S+ +T+ LVG TG+G++AT N+I G++ +S ++ VT C+ + D +
Sbjct: 874 LTSESHPIQTIDLVGTTGSGETATANNIQGKKVVQSGTHATVVTMECQTYKVFTPDCPIN 933
Query: 72 NVIDTPG 78
N+IDTPG
Sbjct: 934 NMIDTPG 940
>sp|O23680|TOC33_ARATH Translocase of chloroplast 33, chloroplastic OS=Arabidopsis
thaliana GN=TOC33 PE=1 SV=1
Length = 297
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 84/167 (50%), Gaps = 11/167 (6%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLF 80
TV+++G+ G GKS+T NS++G + + + + RT+ G +N+IDTPGL
Sbjct: 38 TVLVLGKGGVGKSSTVNSLIGEQVVRVSPFQAEGLRPVMVSRTM--GGFTINIIDTPGLV 95
Query: 81 DFSAGSEFVGKEIVKCIG--MAKDGIHAVLVVFSVR-SRFSQEEEAALHSLQTLFGKKIF 137
+ AG +V + ++ I + I +L V + R + ++ + ++ FGK+I+
Sbjct: 96 E--AG--YVNHQALELIKGFLVNRTIDVLLYVDRLDVYRVDELDKQVVIAITQTFGKEIW 151
Query: 138 DYMIVVFTGGDELEDNDETLEDYLGRECPKPLK--KGATKLRDQQFE 182
++V T ++ + E + + LK + +K+R Q+FE
Sbjct: 152 CKTLLVLTHAQFSPPDELSYETFSSKRSDSLLKTIRAGSKMRKQEFE 198
>sp|Q552Z6|GTPA_DICDI GTP-binding protein A OS=Dictyostelium discoideum GN=gtpA PE=3 SV=1
Length = 449
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 6/130 (4%)
Query: 18 GERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTP 77
E V+L+GRTG GKS+T N++ G +S S R V +G +N+IDTP
Sbjct: 150 NECNVLLLGRTGVGKSSTLNTVFGID-IPVHSSESCTQDPFTYSRVV--NGFKLNIIDTP 206
Query: 78 GLFDFSAGSEFVGKEIVKCIG-MAKDGIHAVLVVFS-VRSRFSQEEEAALHSLQTLFGKK 135
G D S G ++K ++ IH VL V +RF + ++ G +
Sbjct: 207 GFLD-SQGELVDSNNMIKIQRYLSGKTIHCVLFVEKFTETRFDGAHQLVINQFTEKLGPQ 265
Query: 136 IFDYMIVVFT 145
++ VV T
Sbjct: 266 LWRNAAVVLT 275
>sp|Q5SM23|ERA_THET8 GTPase Era OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM
579) GN=era PE=1 SV=1
Length = 301
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDG--QVVNVIDTPGL 79
V +VG+ GKS N++LG K S +T + R +L +G Q+V +DTPGL
Sbjct: 10 VAIVGKPNVGKSTLLNNLLG---VKVAPISPRPQTTRKRLRGILTEGRRQIV-FVDTPGL 65
Query: 80 F-DFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGK 134
A EF+ +E+ + + ++AV+ V +R + E+E +L+ L GK
Sbjct: 66 HKPMDALGEFMDQEVYEALA----DVNAVVWVVDLRHPPTPEDELVARALKPLVGK 117
>sp|Q6S5G3|TOC90_ARATH Translocase of chloroplast 90, chloroplastic OS=Arabidopsis
thaliana GN=TOC90 PE=1 SV=1
Length = 793
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++++G+TG GKSAT NSI G+ ++ A G E+ TV G V IDTPG
Sbjct: 169 ILVLGKTGVGKSATINSIFGQPKSETDAFRPGTDRIEEVMGTV--SGVKVTFIDTPGFHP 226
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVR-----SRFSQEEEAALHSLQTLFGKKI 136
S+ S ++I+ I +V++ R R+S + + L + +FG I
Sbjct: 227 LSSSSTRKNRKILLSIKRYVKKRPPDVVLYLDRLDMIDMRYS--DFSLLQLITEIFGAAI 284
Query: 137 FDYMIVVFT 145
+ I+V T
Sbjct: 285 WLNTILVMT 293
>sp|Q1Q7V4|MNME_PSYCK tRNA modification GTPase MnmE OS=Psychrobacter cryohalolentis
(strain K5) GN=mnmE PE=3 SV=2
Length = 478
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 10/139 (7%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCE--MQRTVLKDGQVVNVIDTPGL 79
VVL GR GKS S+L R A + RA + V T +Q TV+ +G +++ DT GL
Sbjct: 233 VVLAGRPNAGKS----SLLNRLAGQERAIVTDVAGTTRDTLQETVVLNGLTLHLTDTAGL 288
Query: 80 FDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDY 139
+ E +G E + D +L+V+ V +R +EE L + LFG+
Sbjct: 289 RETEDTVERIGIERARTAIAQAD---MLLMVYDV-TRDLEEESTPLQLAEQLFGELPEAK 344
Query: 140 MIVVFTGGDELEDNDETLE 158
+++ +L +N+ + E
Sbjct: 345 RLLIIANKSDLLNNNSSKE 363
>sp|Q41009|TOC34_PEA Translocase of chloroplast 34 OS=Pisum sativum GN=TOC34 PE=1 SV=1
Length = 310
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLF 80
T++++G+ G GKS+T NSI+G R S + R+ + G +N+IDTPGL
Sbjct: 41 TILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRS--RAGFTLNIIDTPGLI 98
Query: 81 DFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRS-RFSQEEEAALHSLQTLFGKKIFDY 139
+ ++ + I+K + K I +L V + + R ++ ++ FGK I++
Sbjct: 99 EGGYIND-MALNIIKSFLLDKT-IDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNK 156
Query: 140 MIVVFT 145
IV T
Sbjct: 157 AIVALT 162
>sp|Q89A14|DER_BUCBP GTPase Der OS=Buchnera aphidicola subsp. Baizongia pistaciae
(strain Bp) GN=der PE=3 SV=1
Length = 462
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLF 80
T+ L+GRT GKS N + G R ++ + +T + ++ + ++V +IDTPG+
Sbjct: 4 TIALIGRTNVGKSTLFNKLTGNRNDALASNHASLTRDRKHGFIIVNNTKIV-LIDTPGIN 62
Query: 81 DFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIF 137
+ S + KEI + + + V +V S R++ ++ + L+ F KKIF
Sbjct: 63 EDSKKKISLDKEIFEQVKFSIKQADLVCLVVSARNKLMHKDVEIIEMLRK-FQKKIF 118
>sp|Q38906|TOC34_ARATH Translocase of chloroplast 34, chloroplastic OS=Arabidopsis
thaliana GN=TOC34 PE=1 SV=2
Length = 313
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFK-SRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGL 79
TV+++G+ G GKS+T NS++G +A S S G+ T + RT + G +N+IDTPGL
Sbjct: 40 TVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTL-VSRT--RSGFTLNIIDTPGL 96
Query: 80 FD 81
+
Sbjct: 97 IE 98
>sp|Q3YRS0|ERA_EHRCJ GTPase Era OS=Ehrlichia canis (strain Jake) GN=era PE=3 SV=1
Length = 296
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 24 LVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQV-VNVIDTPGLFDF 82
+VG T GKS N ++GR K A + V +T VL + V + IDTPG+F
Sbjct: 13 IVGTTNAGKSTLINMLVGR---KVAAVTPKVQTTRVRMHAVLNNENVQLIFIDTPGIFSP 69
Query: 83 SAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAAL 125
E K IVK M+ GI V+++ V++ ++ E +
Sbjct: 70 KTKLE---KFIVKHAWMSLKGIENVILLLDVKNYLNKHIEKII 109
>sp|A8GM80|ERA_RICAH GTPase Era OS=Rickettsia akari (strain Hartford) GN=era PE=3 SV=1
Length = 293
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 17/123 (13%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTV------LKDGQVVNVI 74
+V ++GR +GKS N I+G + S VT + R++ LKD QV+ +
Sbjct: 8 SVCIIGRPNSGKSTLLNRIIGEKL-------SIVTPKVQTTRSIITGIITLKDTQVI-LY 59
Query: 75 DTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGK 134
DTPG+F+ E K +V+C + V+++ F L L++L
Sbjct: 60 DTPGIFEPKGSLE---KAMVRCAWSSLHSADLVMLIIDSLKPFDDVTHDILDKLRSLNIV 116
Query: 135 KIF 137
IF
Sbjct: 117 PIF 119
>sp|Q92JA9|ERA_RICCN GTPase Era OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7)
GN=era PE=3 SV=1
Length = 339
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 17/123 (13%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTV------LKDGQVVNVI 74
+V ++GR +GKS N I+G + S VT + R++ LKD QV+ +
Sbjct: 54 SVCIIGRPNSGKSTLLNRIIGEKL-------SIVTPKVQTTRSIITGIITLKDTQVI-LY 105
Query: 75 DTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGK 134
DTPG+F+ E K +V+C + VL++ F + L++L
Sbjct: 106 DTPGIFEPKGSLE---KAMVRCAWSSLHSADLVLLIIDSLKSFDDITHNIVDKLRSLNIV 162
Query: 135 KIF 137
IF
Sbjct: 163 PIF 165
>sp|Q48BF3|MNME_PSE14 tRNA modification GTPase MnmE OS=Pseudomonas syringae pv.
phaseolicola (strain 1448A / Race 6) GN=mnmE PE=3 SV=1
Length = 456
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 75
TVV+ GR GKS+ N++ GR A + VT R VL+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNALAGREA-------AIVTEIAGTTRDVLREHIHIDGMPLHVVD 270
Query: 76 TPGLFDFSAGSEFVG-KEIVKCIGMA 100
T GL D E +G + +K IG A
Sbjct: 271 TAGLRDTQDQVEMIGVQRALKAIGEA 296
>sp|Q87TS2|MNME_PSESM tRNA modification GTPase MnmE OS=Pseudomonas syringae pv. tomato
(strain DC3000) GN=mnmE PE=3 SV=1
Length = 456
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 75
TVV+ GR GKS+ N++ GR A + VT R VL+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNALAGREA-------AIVTEIAGTTRDVLREHIHIDGMPLHVVD 270
Query: 76 TPGLFDFSAGSEFVG-KEIVKCIGMA 100
T GL D E +G + +K IG A
Sbjct: 271 TAGLRDTQDQVEMIGVQRALKAIGEA 296
>sp|Q8G1P9|ERA_BRUSU GTPase Era OS=Brucella suis biovar 1 (strain 1330) GN=era PE=3 SV=1
Length = 311
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 13 TSPSNGERT--------VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTV 64
TSP+ GE V L+G GKS N ++G K + V +T + R +
Sbjct: 5 TSPAGGETEATQTRSGFVALIGAPNAGKSTLVNQLVGT---KVSIVTHKVQTTRALVRGI 61
Query: 65 LKDG--QVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEE 122
+G Q+V ++DTPG+F + G AKD +LV+ + F++ E
Sbjct: 62 FIEGPAQIV-LVDTPGIF--RPKRRLDRAMVTTAWGGAKDA-DIILVIIDAQGGFNENAE 117
Query: 123 AALHSLQTLFGKKIF 137
A L S++ + KK+
Sbjct: 118 ALLESMKDVRQKKVL 132
>sp|A8MIS4|ENGB_ALKOO Probable GTP-binding protein EngB OS=Alkaliphilus oremlandii
(strain OhILAs) GN=engB PE=3 SV=1
Length = 208
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 14/106 (13%)
Query: 15 PSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVN-- 72
P NG + L GR+ GKS+T N+IL RR ++S G T T +VN
Sbjct: 19 PENGLPEIALAGRSNVGKSSTVNTILKRRKLARVSASPGKTRTINF--------YIVNNE 70
Query: 73 --VIDTP--GLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVR 114
++D P G S G + ++++ ++ ++ V+++ +R
Sbjct: 71 FHIVDLPGYGYAKVSKGEKETWGKMMETYLSSRKNLYEVILLVDIR 116
>sp|Q31DJ0|MNME_THICR tRNA modification GTPase MnmE OS=Thiomicrospira crunogena (strain
XCL-2) GN=mnmE PE=3 SV=2
Length = 451
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 15/146 (10%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 75
+VV++GR GKS+ N++ GR S+ VT R ++K DG ++V+D
Sbjct: 219 SVVILGRPNAGKSSLLNALSGRE-------SAIVTDIAGTTRDIVKEEIQIDGMPLHVLD 271
Query: 76 TPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKK 135
T GL + + E +G ++ A + +LV+ E++A L + +
Sbjct: 272 TAGLREATDAVEQIG---IQRAWAAIEEADRILVMVQANEAIHPEDQAILEKMPSHIPVT 328
Query: 136 IFDYMIVVFTGGDELEDNDETLEDYL 161
+ I + EL +ND E +L
Sbjct: 329 LIHNKIDLIEKSPELSENDGETEIWL 354
>sp|Q4ZL12|MNME_PSEU2 tRNA modification GTPase MnmE OS=Pseudomonas syringae pv. syringae
(strain B728a) GN=mnmE PE=3 SV=1
Length = 456
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 75
TVV+ GR GKS+ N++ GR A + VT R VL+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNALAGREA-------AIVTEIAGTTRDVLREHIHIDGMPLHVVD 270
Query: 76 TPGLFDFSAGSEFVG-KEIVKCIGMA 100
T GL D E +G + +K IG A
Sbjct: 271 TAGLRDTQDQVEMIGVQRALKAIGEA 296
>sp|Q8YG75|ERA_BRUME GTPase Era OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=era PE=3 SV=1
Length = 311
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 13 TSPSNGERT--------VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTV 64
TSP+ GE V L+G GKS N ++G K + V +T + R +
Sbjct: 5 TSPAGGETEATQTRSGFVALIGAPNAGKSTLVNQLVGT---KVSIVTHKVQTTRALVRGI 61
Query: 65 LKDG--QVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEE 122
+G Q+V ++DTPG+F + G AKD +LV+ + F++ E
Sbjct: 62 FIEGPAQIV-LVDTPGIF--RPKRRLDRAMVTTAWGGAKDA-DIILVIIDAQGGFNENAE 117
Query: 123 AALHSLQTLFGKKIF 137
A L S++ + KK+
Sbjct: 118 ALLESMKDVRQKKVL 132
>sp|O81283|TC159_ARATH Translocase of chloroplast 159, chloroplastic OS=Arabidopsis
thaliana GN=TOC159 PE=1 SV=1
Length = 1503
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGL 79
++++G+ G GKSAT NSILG + A TS E+ TV +G + IDTPGL
Sbjct: 857 NILVLGKAGVGKSATINSILGNQIASIDAFGLSTTSVREISGTV--NGVKITFIDTPGL 913
>sp|A4Y199|MNME_PSEMY tRNA modification GTPase MnmE OS=Pseudomonas mendocina (strain ymp)
GN=mnmE PE=3 SV=1
Length = 455
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 75
TVV+ GR GKS+ N++ GR A + VT R VL+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNALAGREA-------AIVTDIAGTTRDVLREHIHIDGMPLHVVD 270
Query: 76 TPGLFDFSAGSEFVGKE-IVKCIGMA 100
T GL D E +G E +K IG A
Sbjct: 271 TAGLRDTDDQVERIGVERALKAIGEA 296
>sp|Q9HT07|MNME_PSEAE tRNA modification GTPase MnmE OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=mnmE
PE=3 SV=1
Length = 455
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 75
TVV+ GR GKS+ N++ GR A + VT R VL+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNALAGREA-------AIVTDIAGTTRDVLREHIHIDGMPLHVVD 270
Query: 76 TPGLFDFSAGSEFVGKE-IVKCIGMA 100
T GL D E +G E +K IG A
Sbjct: 271 TAGLRDTEDHVEKIGVERALKAIGEA 296
>sp|A6VF44|MNME_PSEA7 tRNA modification GTPase MnmE OS=Pseudomonas aeruginosa (strain
PA7) GN=mnmE PE=3 SV=1
Length = 455
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 75
TVV+ GR GKS+ N++ GR A + VT R VL+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNALAGREA-------AIVTDIAGTTRDVLREHIHIDGMPLHVVD 270
Query: 76 TPGLFDFSAGSEFVGKE-IVKCIGMA 100
T GL D E +G E +K IG A
Sbjct: 271 TAGLRDTEDHVEKIGVERALKAIGEA 296
>sp|Q02DE1|MNME_PSEAB tRNA modification GTPase MnmE OS=Pseudomonas aeruginosa (strain
UCBPP-PA14) GN=mnmE PE=3 SV=1
Length = 455
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 75
TVV+ GR GKS+ N++ GR A + VT R VL+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNALAGREA-------AIVTDIAGTTRDVLREHIHIDGMPLHVVD 270
Query: 76 TPGLFDFSAGSEFVGKE-IVKCIGMA 100
T GL D E +G E +K IG A
Sbjct: 271 TAGLRDTEDHVEKIGVERALKAIGEA 296
>sp|Q71ZZ0|RSGA2_LISMF Putative ribosome biogenesis GTPase RsgA 2 OS=Listeria
monocytogenes serotype 4b (strain F2365) GN=rsgA2 PE=3
SV=1
Length = 346
Score = 39.3 bits (90), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRA----SSSGVTSTCEMQRTVLKDGQVVNVIDT 76
T+VL+G +G GKS+ NS+ G K+ S G +T + +L +G + VIDT
Sbjct: 185 TLVLLGSSGVGKSSFINSLAGTDLMKTAGIREDDSKGKHTTTHREMHLLTNGWI--VIDT 242
Query: 77 PGLFDFSAGSEFVGKE 92
PG+ +F G G E
Sbjct: 243 PGMREFGVGFNQAGLE 258
>sp|Q2GGZ1|ERA_EHRCR GTPase Era OS=Ehrlichia chaffeensis (strain Arkansas) GN=era PE=3
SV=1
Length = 296
Score = 39.3 bits (90), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 24 LVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQV-VNVIDTPGLFDF 82
+VG T GKS N ++G+ K A + V +T VL + V + IDTPG+F
Sbjct: 13 IVGTTNAGKSTLINMLVGQ---KVAAVTPKVQTTRVRMHAVLNNENVQLIFIDTPGIFSP 69
Query: 83 SAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAAL 125
E K IVK M+ GI V+++ V++ ++ E +
Sbjct: 70 KTKLE---KFIVKHAWMSLKGIENVILLLDVKNYLNKHIEKII 109
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,446,053
Number of Sequences: 539616
Number of extensions: 3468437
Number of successful extensions: 17827
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 627
Number of HSP's that attempted gapping in prelim test: 17463
Number of HSP's gapped (non-prelim): 826
length of query: 221
length of database: 191,569,459
effective HSP length: 113
effective length of query: 108
effective length of database: 130,592,851
effective search space: 14104027908
effective search space used: 14104027908
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)