Query 027620
Match_columns 221
No_of_seqs 139 out of 1559
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 21:34:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027620.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027620hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zs7_A Pyridoxal kinase; trans 100.0 1.7E-29 5.8E-34 216.5 20.0 183 14-197 3-190 (300)
2 3pzs_A PM kinase, pyridoxamine 100.0 3.8E-28 1.3E-32 206.8 18.9 187 12-198 2-190 (289)
3 3mbh_A Putative phosphomethylp 99.9 2.2E-26 7.6E-31 196.3 19.0 179 13-197 6-190 (291)
4 3h74_A Pyridoxal kinase; PSI-I 99.9 1.3E-25 4.4E-30 190.8 17.8 176 13-195 2-182 (282)
5 2yxt_A Pyridoxal kinase; beta 99.9 5.4E-22 1.8E-26 170.1 21.4 184 13-196 3-190 (312)
6 2ddm_A Pyridoxine kinase; pyri 99.9 9.7E-22 3.3E-26 166.2 20.4 183 14-196 15-199 (283)
7 3rm5_A Hydroxymethylpyrimidine 99.9 5.8E-22 2E-26 182.4 18.6 188 2-196 10-202 (550)
8 2i5b_A Phosphomethylpyrimidine 99.8 8.7E-19 3E-23 147.0 21.3 180 13-199 2-186 (271)
9 1ub0_A THID, phosphomethylpyri 99.8 1E-18 3.6E-23 145.4 19.6 177 14-199 1-180 (258)
10 1jxh_A Phosphomethylpyrimidine 99.8 4.6E-18 1.6E-22 144.2 20.0 178 11-198 22-203 (288)
11 3umo_A 6-phosphofructokinase i 99.7 1.5E-15 5.2E-20 129.3 15.3 178 3-200 2-231 (309)
12 3lhx_A Ketodeoxygluconokinase; 99.6 1.1E-15 3.9E-20 130.8 6.8 161 24-199 51-236 (319)
13 3ry7_A Ribokinase; transferase 99.6 7.8E-15 2.7E-19 124.5 11.0 153 25-200 59-229 (304)
14 1rkd_A Ribokinase; carbohydrat 99.6 5.8E-15 2E-19 125.7 9.5 153 25-200 60-230 (309)
15 3ktn_A Carbohydrate kinase, PF 99.5 9.6E-15 3.3E-19 126.3 8.9 161 25-198 53-246 (346)
16 2fv7_A Ribokinase; structural 99.5 1.7E-14 5.9E-19 124.2 10.3 154 25-200 80-251 (331)
17 4du5_A PFKB; structural genomi 99.5 9.6E-15 3.3E-19 126.1 8.4 159 25-200 77-259 (336)
18 3iq0_A Putative ribokinase II; 99.5 4E-15 1.4E-19 128.1 4.3 159 25-200 56-235 (330)
19 4e69_A 2-dehydro-3-deoxyglucon 99.5 1.5E-14 5.3E-19 124.5 8.0 160 25-201 71-254 (328)
20 3cqd_A 6-phosphofructokinase i 99.5 2.2E-13 7.5E-18 115.9 14.3 157 25-200 57-231 (309)
21 3kzh_A Probable sugar kinase; 99.5 2.9E-14 9.8E-19 122.6 8.6 154 25-201 61-233 (328)
22 3vas_A Putative adenosine kina 99.5 1.3E-14 4.4E-19 127.1 4.7 161 25-199 103-289 (370)
23 2abq_A Fructose 1-phosphate ki 99.5 6.6E-13 2.3E-17 112.8 14.9 157 25-200 55-224 (306)
24 3ljs_A Fructokinase; fructokia 99.5 6.8E-15 2.3E-19 127.0 2.4 160 25-199 55-236 (338)
25 2qcv_A Putative 5-dehydro-2-de 99.5 3.2E-14 1.1E-18 122.2 6.2 162 25-200 63-247 (332)
26 2jg1_A Tagatose-6-phosphate ki 99.5 1.1E-13 3.9E-18 119.1 9.4 158 25-201 75-250 (330)
27 2jg5_A Fructose 1-phosphate ki 99.5 1.7E-13 5.8E-18 116.3 10.3 156 25-200 55-224 (306)
28 2afb_A 2-keto-3-deoxygluconate 99.5 1.3E-13 4.4E-18 119.5 9.6 160 25-198 63-257 (351)
29 2f02_A Tagatose-6-phosphate ki 99.5 1.2E-13 4.2E-18 118.4 8.9 157 25-200 57-232 (323)
30 1bx4_A Protein (adenosine kina 99.5 3.5E-14 1.2E-18 122.7 5.1 161 25-199 86-271 (345)
31 3loo_A Anopheles gambiae adeno 99.5 3.7E-14 1.3E-18 123.8 5.2 163 24-200 101-287 (365)
32 3ie7_A LIN2199 protein; phosph 99.5 8.3E-14 2.8E-18 119.1 7.2 175 4-201 3-229 (320)
33 3otx_A Adenosine kinase, putat 99.5 2.1E-14 7.2E-19 124.3 3.5 163 25-201 88-274 (347)
34 4e84_A D-beta-D-heptose 7-phos 99.5 1E-13 3.5E-18 120.7 7.8 150 25-201 112-282 (352)
35 2nwh_A AGR_C_3442P, carbohydra 99.4 1.5E-13 5E-18 117.6 5.4 151 25-199 58-228 (317)
36 3hj6_A Fructokinase, FRK; fruc 99.4 7.6E-14 2.6E-18 119.9 2.6 158 25-200 73-250 (327)
37 2qhp_A Fructokinase; NP_810670 99.4 3.4E-13 1.2E-17 113.9 6.5 157 25-200 43-222 (296)
38 3pl2_A Sugar kinase, ribokinas 99.4 1.1E-12 3.7E-17 112.0 8.7 156 25-199 60-239 (319)
39 1tyy_A Putative sugar kinase; 99.4 4.7E-14 1.6E-18 122.0 -0.1 155 25-200 69-247 (339)
40 1v1a_A 2-keto-3-deoxygluconate 99.4 4E-13 1.4E-17 114.3 5.7 154 25-201 52-227 (309)
41 3h49_A Ribokinase; transferase 99.4 6E-13 2E-17 114.2 6.8 156 25-201 62-237 (325)
42 4e3a_A Sugar kinase protein; s 99.4 2.3E-13 7.8E-18 118.4 4.1 156 25-201 99-275 (352)
43 2ajr_A Sugar kinase, PFKB fami 99.4 8.9E-13 3E-17 113.5 7.0 156 25-200 70-247 (331)
44 2abs_A Adenosine kinase, AK; r 99.3 4E-13 1.4E-17 117.9 3.5 162 25-202 110-307 (383)
45 2v78_A Fructokinase; transfera 99.3 1.3E-12 4.6E-17 111.2 4.7 156 25-201 52-234 (313)
46 3uq6_A Adenosine kinase, putat 99.3 4.5E-12 1.5E-16 110.9 6.9 162 25-201 105-293 (372)
47 1vm7_A Ribokinase; TM0960, str 99.2 2.8E-12 9.5E-17 109.5 4.1 145 25-200 71-233 (311)
48 2dcn_A Hypothetical fructokina 99.2 3.2E-12 1.1E-16 108.7 4.4 154 25-200 52-231 (311)
49 2rbc_A Sugar kinase, AGR_C_456 99.2 2.6E-12 8.8E-17 111.3 3.2 145 25-200 85-249 (343)
50 3ikh_A Carbohydrate kinase; tr 99.2 5.5E-12 1.9E-16 107.0 3.9 135 25-200 58-209 (299)
51 3kd6_A Carbohydrate kinase, PF 99.2 8.5E-12 2.9E-16 106.5 3.1 151 25-200 48-213 (313)
52 4gm6_A PFKB family carbohydrat 99.1 5.3E-12 1.8E-16 109.2 0.4 136 25-170 75-232 (351)
53 3ewm_A Uncharacterized sugar k 99.1 1.1E-10 3.8E-15 99.4 5.2 150 25-200 52-222 (313)
54 2c4e_A Sugar kinase MJ0406; tr 99.0 3.8E-11 1.3E-15 101.8 1.2 143 25-200 61-221 (302)
55 2pkf_A Adenosine kinase; trans 99.0 2E-10 6.7E-15 98.9 5.2 147 25-199 76-239 (334)
56 1vk4_A PFKB carbohydrate kinas 99.0 6.2E-11 2.1E-15 100.4 0.3 148 25-200 55-222 (298)
57 3go6_A Ribokinase RBSK; phosph 98.9 2.2E-10 7.6E-15 97.7 2.4 132 25-200 75-223 (310)
58 2hlz_A Ketohexokinase; non-pro 98.9 1.2E-09 4.1E-14 93.1 5.6 145 25-199 73-244 (312)
59 3b1n_A Ribokinase, putative; r 98.8 4.3E-10 1.5E-14 96.5 0.8 153 25-201 66-228 (326)
60 1ekq_A Hydroxyethylthiazole ki 98.8 1.3E-08 4.6E-13 85.4 8.6 96 90-195 64-170 (272)
61 2r3b_A YJEF-related protein; p 98.8 2.5E-09 8.5E-14 91.6 3.7 154 14-195 44-209 (310)
62 3bgk_A SMU.573, putative uncha 98.8 1.4E-09 4.7E-14 93.2 1.1 156 14-195 58-225 (311)
63 1v8a_A Hydroxyethylthiazole ki 98.5 7.1E-08 2.4E-12 80.7 5.1 96 90-195 62-167 (265)
64 3dzv_A 4-methyl-5-(beta-hydrox 98.4 3.1E-06 1.1E-10 71.0 11.0 99 89-195 63-176 (273)
65 3nl6_A Thiamine biosynthetic b 98.1 1.5E-05 5E-10 73.0 11.1 94 90-194 312-418 (540)
66 3bf5_A Ribokinase related prot 98.0 2.5E-07 8.4E-12 78.6 -2.7 139 25-200 75-222 (306)
67 3hpd_A Hydroxyethylthiazole ki 97.7 8.2E-05 2.8E-09 62.0 7.7 96 90-193 62-166 (265)
68 3rss_A Putative uncharacterize 97.6 6.4E-05 2.2E-09 68.2 6.0 107 67-193 306-415 (502)
69 3rpz_A ADP/ATP-dependent NAD(P 97.4 0.00018 6.1E-09 60.4 6.1 91 87-194 99-191 (279)
70 3k5w_A Carbohydrate kinase; 11 91.0 0.088 3E-06 47.2 2.2 50 146-195 333-389 (475)
71 1ua4_A Glucokinase, ADP-depend 82.2 9.7 0.00033 33.7 10.1 71 116-193 259-343 (455)
72 3drw_A ADP-specific phosphofru 82.2 4.6 0.00016 36.0 8.0 112 70-193 224-358 (474)
73 1gc5_A ADP-dependent glucokina 81.4 6.8 0.00023 34.9 8.8 100 87-193 234-353 (467)
74 1l2l_A ADP-dependent glucokina 80.6 30 0.001 30.6 12.9 111 70-193 216-346 (457)
75 3nvt_A 3-deoxy-D-arabino-heptu 71.4 34 0.0012 29.5 10.3 110 68-195 154-287 (385)
76 2bdq_A Copper homeostasis prot 68.3 40 0.0014 26.8 9.3 56 67-126 70-127 (224)
77 1twd_A Copper homeostasis prot 66.1 24 0.00082 28.7 7.7 57 66-126 66-124 (256)
78 4djd_C C/Fe-SP, corrinoid/iron 59.1 94 0.0032 27.3 12.5 118 66-195 101-235 (446)
79 1zco_A 2-dehydro-3-deoxyphosph 58.7 71 0.0024 25.8 10.4 108 69-194 36-167 (262)
80 1vr6_A Phospho-2-dehydro-3-deo 54.6 99 0.0034 26.2 10.1 80 101-195 156-251 (350)
81 1to3_A Putative aldolase YIHT; 53.2 68 0.0023 26.5 8.6 86 101-195 141-231 (304)
82 3iwp_A Copper homeostasis prot 40.7 1.5E+02 0.0052 24.4 10.6 58 66-127 104-163 (287)
83 1vs1_A 3-deoxy-7-phosphoheptul 40.0 1.2E+02 0.0041 24.7 8.0 79 102-195 89-183 (276)
84 1vli_A Spore coat polysacchari 38.0 57 0.0019 28.2 5.8 79 101-193 100-192 (385)
85 2l82_A Designed protein OR32; 37.0 1.1E+02 0.0037 21.6 8.3 21 101-123 12-32 (162)
86 3m47_A Orotidine 5'-phosphate 35.9 1.1E+02 0.0037 24.0 6.9 37 87-128 38-75 (228)
87 1qwg_A PSL synthase;, (2R)-pho 35.4 99 0.0034 25.0 6.5 63 55-123 11-74 (251)
88 3vk5_A MOEO5; TIM barrel, tran 33.5 1.6E+02 0.0055 24.2 7.6 50 68-124 51-104 (286)
89 1ex7_A Guanylate kinase; subst 33.0 1.6E+02 0.0054 22.2 8.6 126 28-175 11-144 (186)
90 2wqp_A Polysialic acid capsule 32.7 2.3E+02 0.0077 24.0 10.9 77 100-191 89-179 (349)
91 3rot_A ABC sugar transporter, 30.3 1.9E+02 0.0067 22.5 9.1 46 70-124 48-94 (297)
92 3g8r_A Probable spore coat pol 30.3 1.9E+02 0.0066 24.4 7.8 76 101-191 77-166 (350)
93 3l52_A Orotidine 5'-phosphate 29.8 2E+02 0.0067 23.6 7.6 63 87-157 63-134 (284)
94 2fcj_A Small toprim domain pro 29.7 96 0.0033 22.0 5.0 66 101-180 38-103 (119)
95 1y7p_A Hypothetical protein AF 28.4 70 0.0024 25.4 4.4 48 69-124 130-179 (223)
96 4eys_A MCCC family protein; MC 27.5 1.2E+02 0.0043 25.3 6.2 57 68-126 259-316 (346)
97 1u83_A Phosphosulfolactate syn 27.4 91 0.0031 25.6 5.1 62 55-123 38-99 (276)
98 3tfx_A Orotidine 5'-phosphate 26.9 1.2E+02 0.004 24.5 5.7 36 88-128 32-67 (259)
99 3tr2_A Orotidine 5'-phosphate 25.5 1.4E+02 0.0049 23.6 5.9 36 87-127 34-69 (239)
100 2guz_B Mitochondrial import in 25.1 84 0.0029 19.6 3.6 30 155-184 1-34 (65)
101 3ldv_A Orotidine 5'-phosphate 25.0 1.3E+02 0.0046 24.1 5.7 50 73-128 40-89 (255)
102 3sz8_A 2-dehydro-3-deoxyphosph 23.4 3E+02 0.01 22.4 7.6 78 102-195 78-172 (285)
103 3iix_A Biotin synthetase, puta 23.4 3E+02 0.01 22.3 13.1 106 66-187 83-193 (348)
104 3tr9_A Dihydropteroate synthas 22.3 3.4E+02 0.012 22.5 9.0 88 101-192 176-274 (314)
105 3fs2_A 2-dehydro-3-deoxyphosph 22.2 3.3E+02 0.011 22.4 8.1 77 103-195 100-193 (298)
106 1x7f_A Outer surface protein; 22.1 1.5E+02 0.0051 25.5 5.7 40 86-127 54-97 (385)
107 1vim_A Hypothetical protein AF 21.9 2.5E+02 0.0085 20.9 11.0 96 66-195 31-126 (200)
108 3rzi_A Probable 3-deoxy-D-arab 21.9 1.8E+02 0.0062 25.5 6.2 58 64-124 308-367 (462)
109 2q5c_A NTRC family transcripti 20.8 80 0.0027 24.1 3.4 35 156-190 108-147 (196)
110 2iv2_X Formate dehydrogenase H 20.8 1.4E+02 0.0049 27.4 5.7 30 159-191 266-295 (715)
111 3sho_A Transcriptional regulat 20.2 2.5E+02 0.0087 20.3 12.7 102 66-195 23-124 (187)
No 1
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=99.97 E-value=1.7e-29 Score=216.53 Aligned_cols=183 Identities=44% Similarity=0.785 Sum_probs=158.3
Q ss_pred CCeEEEEeccCccCccchhhcHHHHHhcCCceeeeeeEEeecCCCCCccceeeCCHHHHHHHHHHHHhcCcc-cccEEEE
Q 027620 14 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLL-YYTHLLT 92 (221)
Q Consensus 14 ~~~vl~i~~~~~~G~vG~d~~~~~l~~~gi~~~~v~~~~~~~~~~~~~~~G~~l~~~~i~~~l~~i~~~~~l-~~~~v~~ 92 (221)
.|+||+|+++|+.|++|+.+++..|+.+|+++..++|+..+|+++|..+.|..++.++++.++++++....+ .+|+|++
T Consensus 3 ~~~VLsI~~~~~~G~~G~~aa~~~l~~~G~~v~~~~T~~~Snhtg~~~~~g~~~~~~ql~~~~~~~~~~~~~~~~daV~t 82 (300)
T 3zs7_A 3 EKTVLSIQSFVTHGYVGNKAATFPLQLHGFDVDGINTVCLSNHSGYPVIRGHRMSLQEYDELMEGVRANNFLSNYRYILT 82 (300)
T ss_dssp CCEEEEEEEEESSSSCHHHHHHHHHHHTTCEEEEEEEEEESSCTTSSCCCEEECCHHHHHHHHHHHHHTTCGGGCSEEEE
T ss_pred CCeEEEEeCccCCCcchHHHHHHHHHHcCCeeEEeeeEEecCCCCCCCcCCCcCCHHHHHHHHHHHHhcCCcccCCEEEE
Confidence 589999999999999999999999999999999999998889999887788999999999999999876532 4889999
Q ss_pred eecCChhHHHHHHHHHHHHHhcCCC----CeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCCCC
Q 027620 93 GYIGSVSFLNTILQVVEKLRSINPN----LIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRI 168 (221)
Q Consensus 93 G~l~~~~~~~~i~~~i~~ak~~~~~----~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~~~ 168 (221)
||+++....+.+.++++.+|+++|+ .++++||++++.|.+|.+++..+.+++ +++.+|+++||..|++.|+|.++
T Consensus 83 G~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~-Ll~~adiitPN~~Ea~~L~g~~~ 161 (300)
T 3zs7_A 83 GYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRE-LVPLADIVTPNYFEASLLSGVTV 161 (300)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHH-HGGGCSEECCCHHHHHHHHSSCC
T ss_pred CCCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHH-HhhhCCEecCCHHHHHHHhCCCC
Confidence 9999999999999999999876333 789999999977888888999999998 99999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCeEEEeeeeeC
Q 027620 169 GSEADGREACKILHAAGPAKVVITSINID 197 (221)
Q Consensus 169 ~s~~~~~~a~~~L~~~G~~~VvVT~G~~~ 197 (221)
.+.+++.+++++|+++|++.|+||+|+..
T Consensus 162 ~~~~~~~~aa~~L~~~G~~~Vvvt~g~~g 190 (300)
T 3zs7_A 162 NDLSSAILAADWFHNCGVAHVIIKSFREQ 190 (300)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEEEEEC--
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEecCcCC
Confidence 99999999999999999999999999954
No 2
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=99.96 E-value=3.8e-28 Score=206.84 Aligned_cols=187 Identities=35% Similarity=0.613 Sum_probs=162.9
Q ss_pred CCCCeEEEEeccCccCccchhhcHHHHHhcCCceeeeeeEEeecCCCCCccceeeCCHHHHHHHHHHHHhcCcc-cccEE
Q 027620 12 SETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLL-YYTHL 90 (221)
Q Consensus 12 ~~~~~vl~i~~~~~~G~vG~d~~~~~l~~~gi~~~~v~~~~~~~~~~~~~~~G~~l~~~~i~~~l~~i~~~~~l-~~~~v 90 (221)
..||+||+|+|+|..|++|+.++++.++.+|+++..+.+....+++++..+.|..++.++++++++.+.....+ .+|+|
T Consensus 2 ~~m~~vl~I~~~~~~G~~g~~a~~~~l~~~G~~~~~~~T~~~s~~t~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~d~v 81 (289)
T 3pzs_A 2 NAMKNILSIQSHVVFGHAGNSAAEFPMRRMGVNVWPLNTVQFSNHTQYGHWTGCVMPASHLTDIVQGIADIDRLKDCDAV 81 (289)
T ss_dssp ---CEEEEEEEEESSSCSTHHHHHHHHHHTTCEEEEEEEEEESSCGGGSCCCEEECCHHHHHHHHHHHHHTTCGGGCCEE
T ss_pred CCCCeEEEEecccCCCccchHHHHHHHHHcCCeEEEeeeEEcCCCCCCCCcccccCCHHHHHHHHHHHHhcCCccCCCEE
Confidence 47999999999999999999999999999999999999886668888776778899999999999988765322 57889
Q ss_pred EEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCC-CCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCCCCC
Q 027620 91 LTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEG-KLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIG 169 (221)
Q Consensus 91 ~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g-~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~~~~ 169 (221)
++||+++....+.+.++++.+|+++|+.++++||++++.+ ..+++++..+.+++.+++++|+++||+.|++.|+|.++.
T Consensus 82 ~~G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~~ 161 (289)
T 3pzs_A 82 LSGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALPASDMIAPNLLELEQLSGERVE 161 (289)
T ss_dssp EECCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHHHHCSEECCCHHHHHHHHTSCCC
T ss_pred EECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhhccCCEEeCCHHHHHHHhCCCCC
Confidence 9999999999999999999998875568999999998543 345778888999876899999999999999999999988
Q ss_pred CHHHHHHHHHHHHHcCCCeEEEeeeeeCC
Q 027620 170 SEADGREACKILHAAGPAKVVITSINIDG 198 (221)
Q Consensus 170 s~~~~~~a~~~L~~~G~~~VvVT~G~~~~ 198 (221)
+.+++.+++++|.++|++.|+||+|+.+|
T Consensus 162 ~~~~~~~aa~~l~~~g~~~Vvvt~~~~~G 190 (289)
T 3pzs_A 162 NVEQAVQVARSLCARGPKVVLVKHLSRAG 190 (289)
T ss_dssp SHHHHHHHHHHHHTTSCSEEEECCCGGGS
T ss_pred CHHHHHHHHHHHHHHCCCEEEEecccCCC
Confidence 89999999999999999999999876565
No 3
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=99.95 E-value=2.2e-26 Score=196.31 Aligned_cols=179 Identities=24% Similarity=0.429 Sum_probs=154.1
Q ss_pred CCCeEEEEeccCccCccchhhcHHHHHhcCCceeeeeeE-EeecCCCCCccceeeCCHHHHHHHHHHHHhcCcccccEEE
Q 027620 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSV-QFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLL 91 (221)
Q Consensus 13 ~~~~vl~i~~~~~~G~vG~d~~~~~l~~~gi~~~~v~~~-~~~~~~~~~~~~G~~l~~~~i~~~l~~i~~~~~l~~~~v~ 91 (221)
.||+||+|+|+|..|++|..++++.++.+|+....+.|. +.+++ ++..+.+..++ ++++.+++.+...+. .+++|+
T Consensus 6 ~m~~vL~I~g~d~~GgaGi~adl~~~~a~G~~~~~v~Ta~~sq~t-g~~~~~~~~~~-~~~~~~~~~~~~~d~-~~~aik 82 (291)
T 3mbh_A 6 KVKKIAAVHDLSGMGRVSLTVVIPILSSMGFQVCPLPTAVLSNHT-QYPGFSFLDLT-DEMPKIIAEWKKLEV-QFDAIY 82 (291)
T ss_dssp CCCEEEEECCEEEESSCTHHHHHHHHHHTTCEEEECCCEEEEECT-TSSCCCEEECT-TTHHHHHHHHHHTTC-CCSEEE
T ss_pred ccCcEEEEeCCCCCCcHHHHHHHHHHHHcCCeeeEEEEEEeccCC-CCCCeeecCcH-HHHHHHHHHHHhcCC-ccCEEE
Confidence 479999999999999999999999999999999888776 55555 87666555665 789999888875554 789999
Q ss_pred EeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCC--CchhHHHHHHHhcCCCceEEecCHHHHHHhcCCCCC
Q 027620 92 TGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLY--VPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIG 169 (221)
Q Consensus 92 ~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~--~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~~~~ 169 (221)
+||+++....+.+.++++.+++. +.++++||++++.|.+| .+++..+.+++ +++++|+++||+.|++.|+|.++.
T Consensus 83 ~G~l~s~~~i~~v~~~l~~~~~~--~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~-ll~~adiitpN~~Ea~~L~g~~~~ 159 (291)
T 3mbh_A 83 TGYLGSPRQIQIVSDFIKDFRQP--DSLIVADPVLGDNGRLYTNFDMEMVKEMRH-LITKADVITPNLTELFYLLDEPYK 159 (291)
T ss_dssp ECCCSSTTHHHHHHHHHHHHCCT--TCEEEECCCCEETTEECTTCCHHHHHHHHH-HGGGCSEECCBHHHHHHHHTCCCC
T ss_pred ECCCCCHHHHHHHHHHHHHhcCC--CCcEEECceeeeCCCCCCCCCHHHHHHHHH-HhccCCEEeCCHHHHHHHhCCCCC
Confidence 99999888899999999988654 88999999998665433 46888888886 999999999999999999998765
Q ss_pred ---CHHHHHHHHHHHHHcCCCeEEEeeeeeC
Q 027620 170 ---SEADGREACKILHAAGPAKVVITSINID 197 (221)
Q Consensus 170 ---s~~~~~~a~~~L~~~G~~~VvVT~G~~~ 197 (221)
+.+++++++++|.++|++.|+||+|+..
T Consensus 160 ~~~~~~~~~~aa~~L~~~g~~~Vvvtgg~~~ 190 (291)
T 3mbh_A 160 ADSTDEELKEYLRLLSDKGPQVVIITSVPVH 190 (291)
T ss_dssp SCCCHHHHHHHHHHHHHTSCSEEEEEEEEET
T ss_pred CCCCHHHHHHHHHHHHhhCCCEEEEEecccc
Confidence 7789999999999999999999999863
No 4
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=99.94 E-value=1.3e-25 Score=190.82 Aligned_cols=176 Identities=27% Similarity=0.372 Sum_probs=147.8
Q ss_pred CCCeEEEEeccCccCccchhhcHHHHHhcCCceeeeeeE-EeecCCCCCccceeeCCHHHHHHHHHHHHhcCcccccEEE
Q 027620 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSV-QFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLL 91 (221)
Q Consensus 13 ~~~~vl~i~~~~~~G~vG~d~~~~~l~~~gi~~~~v~~~-~~~~~~~~~~~~G~~l~~~~i~~~l~~i~~~~~l~~~~v~ 91 (221)
.+|+||+|+|+|..|++|..++++.++.+|+....+.|. +.+++.++..+.+..++ ++++.+++.+...+. .+++++
T Consensus 2 ~~~~vL~I~~~~~~GgaGi~Adl~~~~a~G~~~~~v~Ta~~sq~t~g~~~~~~~~~~-~~~~~~~~~~~~~d~-~~daik 79 (282)
T 3h74_A 2 SLSTMLVAEDLSAVGGISLSSALPVLTAMQYDVAALPTSLLSTHTSGYGTPAVVDLS-TWLPQVFAHWTRAQL-HFDQAL 79 (282)
T ss_dssp CCEEEEEEEEEEEESSCHHHHHHHHHHHTTEEEEEEEEEEEEECSSSSSSCCEECCT-TTHHHHHHHHHHTTC-CCSEEE
T ss_pred CCCeEEEEeCcCCCChHHHHHHHHHHHHcCCeeeeEEEEEeeEcCCCcceeeeecCh-HHHHHHHHHHHHcCC-ccCEEE
Confidence 368999999999999999999999999999988888776 55666687665555665 677777777765443 789999
Q ss_pred EeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCC--CchhHHHHHHHhcCCCceEEecCHHHHHHhcCCCCC
Q 027620 92 TGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLY--VPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIG 169 (221)
Q Consensus 92 ~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~--~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~~~~ 169 (221)
+||+++....+.+.++++.. ++.++++||++++.|.+| .+++..+.+++ +++++|+++||..|++.|+|.++.
T Consensus 80 ~G~l~s~~~i~~v~~~l~~~----~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~-ll~~adiitpN~~Ea~~L~g~~~~ 154 (282)
T 3h74_A 80 IGYVGSVALCQQITTYLEQQ----TLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQ-LIQQADVILPNTTEAALLTGAPYQ 154 (282)
T ss_dssp ECCCCSHHHHHHHHHHHHHS----CCSEEEECCCCEETTEECTTCCHHHHHHHHH-HGGGCSEECCCHHHHHHHHTCCCC
T ss_pred ECCCCCHHHHHHHHHHHHHC----CCCcEEEcCeeecCCCCCCCCCHHHHHHHHH-HhccCCEECCCHHHHHHHhCCCCC
Confidence 99999877777777766654 367999999998755544 47888888987 999999999999999999999887
Q ss_pred CHHHHHHHHHHHHH-cCC-CeEEEeeee
Q 027620 170 SEADGREACKILHA-AGP-AKVVITSIN 195 (221)
Q Consensus 170 s~~~~~~a~~~L~~-~G~-~~VvVT~G~ 195 (221)
+.+++++++++|.+ +|+ +.|+||+|+
T Consensus 155 ~~~~~~~aa~~L~~~~g~~~~Vvvt~G~ 182 (282)
T 3h74_A 155 VTPDLEVILPALQAQLKTGAHAVITDVQ 182 (282)
T ss_dssp SSCCHHHHHHHHHTTSCTTCEECEEEEE
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEecC
Confidence 77889999999998 999 999999998
No 5
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.90 E-value=5.4e-22 Score=170.07 Aligned_cols=184 Identities=54% Similarity=0.966 Sum_probs=146.6
Q ss_pred CCCeEEEEeccCccCccchhhcHHHHHhcCCceeeeeeEEeecCCCCCccceeeCCHHHHHHHHHHHHhcCcccccEEEE
Q 027620 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLT 92 (221)
Q Consensus 13 ~~~~vl~i~~~~~~G~vG~d~~~~~l~~~gi~~~~v~~~~~~~~~~~~~~~G~~l~~~~i~~~l~~i~~~~~l~~~~v~~ 92 (221)
++|+||+|++++++|++|+|.-...|+++||+++++.++...+++++..+.|..+++++++.+++.+.....-.++++++
T Consensus 3 ~~~~vl~i~~~~~~g~vG~D~g~~iL~~~GV~~~~v~~~~~~~~t~~~~~~g~~l~~~~i~~~~~~~~~~~~~~~~~v~~ 82 (312)
T 2yxt_A 3 EECRVLSIQSHVIRGYVGNRAATFPLQVLGFEIDAVNSVQFSNHTGYAHWKGQVLNSDELQELYEGLRLNNMNKYDYVLT 82 (312)
T ss_dssp CCCEEEEEEEEESSSCSTHHHHHHHHHHTTCEEEEEEEEEESSCTTSSCCCEEECCHHHHHHHHHHHHHTTCCCCSEEEE
T ss_pred CCCeEEEEecccCCCccchHhhHHHHHHcCCeEEEEEEEEecCCCCcCCccCccCCHHHHHHHHHHHHhcCCccCCEEEE
Confidence 35899999999999999999822239999999999877632356665545688899999998877765432213567889
Q ss_pred eecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCC----CCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCCCC
Q 027620 93 GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDE----GKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRI 168 (221)
Q Consensus 93 G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~----g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~~~ 168 (221)
|+++++...+.+.++++.++++.+.+++++||++++. |.+|.+++..+.+++.+++++|+++||++|++.|+|.++
T Consensus 83 G~~~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g~~~ 162 (312)
T 2yxt_A 83 GYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADIITPNQFEAELLSGRKI 162 (312)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGGGCSEECCCHHHHHHHHSCCC
T ss_pred CCCCCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhhhCCEEcCCHHHHHHHhCCCC
Confidence 9998766678888999999887222458999998743 655655566677764489999999999999999999888
Q ss_pred CCHHHHHHHHHHHHHcCCCeEEEeeeee
Q 027620 169 GSEADGREACKILHAAGPAKVVITSINI 196 (221)
Q Consensus 169 ~s~~~~~~a~~~L~~~G~~~VvVT~G~~ 196 (221)
.+.+++.+++++|+++|++.|+||+|+.
T Consensus 163 ~~~~~~~~~~~~l~~~g~~~VvvT~G~~ 190 (312)
T 2yxt_A 163 HSQEEALRVMDMLHSMGPDTVVITSSDL 190 (312)
T ss_dssp CSHHHHHHHHHHHHHHSCSEEEECCCSC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccC
Confidence 8888999999999999999999999984
No 6
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.89 E-value=9.7e-22 Score=166.19 Aligned_cols=183 Identities=31% Similarity=0.469 Sum_probs=145.3
Q ss_pred CCeEEEEeccCccCccchhhcHHHHHhcCCceeeeeeEEeecCCCCCccceeeCCHHHHHHHHHHHHhcCcc-cccEEEE
Q 027620 14 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLL-YYTHLLT 92 (221)
Q Consensus 14 ~~~vl~i~~~~~~G~vG~d~~~~~l~~~gi~~~~v~~~~~~~~~~~~~~~G~~l~~~~i~~~l~~i~~~~~l-~~~~v~~ 92 (221)
+|+||+|.+++.+|.+|+|..++.|+++|+++.++.+....+++++..+.|..+++++++.+++.+.....+ .++++++
T Consensus 15 ~~~vL~i~~~~~~g~~G~d~~~~~l~~~Gv~~~~v~t~i~~~~~g~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~v~~ 94 (283)
T 2ddm_A 15 QADIVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTT 94 (283)
T ss_dssp CCSEEEEEEEESSSSSTHHHHHHHHHHTTCCEEEEEEEEESSCTTSSCCCEEECCHHHHHHHHHHHHHTTCCTTCCEEEE
T ss_pred cCeEEEEecccCCCcchHHHHHHHHHHcCCeeeEEeEEEeccCCCcCceeeeeCCHHHHHHHHHHHHhcCCcccCCEEEE
Confidence 489999999999999999998899999999999987653334455544557788989998887777552111 3578899
Q ss_pred eecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCC-CCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCCCCCCH
Q 027620 93 GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDE-GKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSE 171 (221)
Q Consensus 93 G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~-g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~~~~s~ 171 (221)
|+++.....+.+.++++.++++++++++++||++++. |..|..++..+.+++.+++++|+++||+.|++.|+|.++.+.
T Consensus 95 G~l~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g~~~~~~ 174 (283)
T 2ddm_A 95 GYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKNCRDL 174 (283)
T ss_dssp CCCSCHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHHHHHHTSCCSSH
T ss_pred CCcCCHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHHHHHhCCCCCCH
Confidence 9998877788888999999872238899999998743 345555555566654589999999999999999999888788
Q ss_pred HHHHHHHHHHHHcCCCeEEEeeeee
Q 027620 172 ADGREACKILHAAGPAKVVITSINI 196 (221)
Q Consensus 172 ~~~~~a~~~L~~~G~~~VvVT~G~~ 196 (221)
+++.+++++|.++|++.|+||+|+.
T Consensus 175 ~~~~~~a~~l~~~g~~~Vvvt~G~~ 199 (283)
T 2ddm_A 175 DSAIAAAKSLLSDTLKWVVVTSASG 199 (283)
T ss_dssp HHHHHHHHHHCCSSCCEEEEEC---
T ss_pred HHHHHHHHHHHHcCCCEEEEccccC
Confidence 8899999999999999999999995
No 7
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=99.89 E-value=5.8e-22 Score=182.40 Aligned_cols=188 Identities=21% Similarity=0.245 Sum_probs=149.1
Q ss_pred CCCeeeccCCCCCCeEEEEeccCccCccchhhcHHHHHhcCCce-eeeeeEEeecCCCCCccceeeCCHHHHHHHHHHHH
Q 027620 2 APPILSLALPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDV-DPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLE 80 (221)
Q Consensus 2 ~~~~~~~~~~~~~~~vl~i~~~~~~G~vG~d~~~~~l~~~gi~~-~~v~~~~~~~~~~~~~~~G~~l~~~~i~~~l~~i~ 80 (221)
.||-|+..-...+|+||+|.|+|.+|.+|..++++.|.++|+.. +.++..+.+|+.++..+ ..++++.+..+++.+.
T Consensus 10 ~~~~~~~~~~~~~~~vL~IaGsd~~gGAgi~Adlktl~a~g~~~~~~~Tavt~q~~~~v~~~--~~~p~~~v~~ql~~~~ 87 (550)
T 3rm5_A 10 PPPYLTLACNEKLPTVLSIAGTDPSGGAGIEADVKTITAHRCYAMTCITALNAQTPVKVYSI--NNTPKEVVFQTLESNL 87 (550)
T ss_dssp CCTTGGGGTTBCCCEEEEEEEBCTTSSSHHHHHHHHHHHTTCEEEEEEEEEEEECSSCEEEE--EECCHHHHHHHHHHHH
T ss_pred CCcccccccCCCCCEEEEEeCcCCCcHHHHHHHHHHHHHcCCeeceeceEEEeecCCCcceE--EECCHHHHHHHHHHHH
Confidence 47778888888899999999999999999999999999999876 55555577777665433 3456666666666554
Q ss_pred hcCcccccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEccccc-CCCCCCCchhHHHHHHHhcCCCceEEecCHHH
Q 027620 81 ANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG-DEGKLYVPSELVSVYREKVVPVASMLTPNQFE 159 (221)
Q Consensus 81 ~~~~l~~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~-~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~E 159 (221)
.. +.+++|++||+ +....+.+.++++..+++ +.++|+||+++ +.|..+++++..+.+++.+++.+|+++||..|
T Consensus 88 ~d--~~~daIkiG~l-s~~~i~~v~~~l~~~~~~--~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~~a~iitPN~~E 162 (550)
T 3rm5_A 88 KD--MKCNVIKTGML-TAAAIEVLHEKLLQLGEN--RPKLVVDPVLVATSGSSLAGKDIVSLITEKVAPFADILTPNIPE 162 (550)
T ss_dssp HH--BCCSEEEECSC-CHHHHHHHHHHHHHHGGG--SCEEEECCCC---------CTTHHHHHHHHTGGGCSEECCBHHH
T ss_pred hC--CCCCEEEECCC-CHHHHHHHHHHHHHhccc--CCCEEEecceecCCCCcCCCHHHHHHHHHHhhCcceEEecCHHH
Confidence 32 25889999999 888889999999888766 77999999986 46666678888898985599999999999999
Q ss_pred HHHhcCCC--CCCHHHHHHHHHHHHHcCC-CeEEEeeeee
Q 027620 160 AEQLTGFR--IGSEADGREACKILHAAGP-AKVVITSINI 196 (221)
Q Consensus 160 a~~l~g~~--~~s~~~~~~a~~~L~~~G~-~~VvVT~G~~ 196 (221)
++.|+|.+ +.+.+++.+++++|.++|. +.|+||+|+.
T Consensus 163 a~~L~g~~~~i~~~~d~~~aa~~L~~~g~~~~VvvkgG~~ 202 (550)
T 3rm5_A 163 CYKLLGEERKVNGLQDIFQIAKDLAKITKCSNILVKGGHI 202 (550)
T ss_dssp HHHHHSCCCCCCSSHHHHHHHHHHHHHHCCSCEEEEECC-
T ss_pred HHHHhCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 99999974 6677899999999998886 7999999985
No 8
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.83 E-value=8.7e-19 Score=147.02 Aligned_cols=180 Identities=22% Similarity=0.258 Sum_probs=136.4
Q ss_pred CCCeEEEEeccCccCccchhhcHHHHHhcCCceeeeeeE-EeecCCCCCccceeeCCHHHHHHHHHHHHhcCcccccEEE
Q 027620 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSV-QFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLL 91 (221)
Q Consensus 13 ~~~~vl~i~~~~~~G~vG~d~~~~~l~~~gi~~~~v~~~-~~~~~~~~~~~~G~~l~~~~i~~~l~~i~~~~~l~~~~v~ 91 (221)
+||++|+|.|+|..|..|..++++.++..|+....+.+. ..+++.+.....-..++++.+.+.++.+... +.+++++
T Consensus 2 ~~~~vl~i~G~d~~gga~~~a~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~d~v~ 79 (271)
T 2i5b_A 2 SMHKALTIAGSDSSGGAGIQADLKTFQEKNVYGMTALTVIVAMDPNNSWNHQVFPIDTDTIRAQLATITDG--IGVDAMK 79 (271)
T ss_dssp -CCEEEEEEEEETTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTTTTEEEEEECCHHHHHHHHHHHHHH--SCCSEEE
T ss_pred CCCEEEEEeCcCCCchHHHHHHHHHHHHcCCEEeEEeeEEEeEcCCCCceeEEEeCCHHHHHHHHHHHHhC--CCCCEEE
Confidence 578999999999999999999999999999877777655 3334433111111356666666665555432 1467899
Q ss_pred EeecCChhHHHHHHHHHHHHHhcCCCC-eEEEcccccC-CCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCCC-C
Q 027620 92 TGYIGSVSFLNTILQVVEKLRSINPNL-IYVCDPVMGD-EGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFR-I 168 (221)
Q Consensus 92 ~G~l~~~~~~~~i~~~i~~ak~~~~~~-~vvlDp~~~~-~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~~-~ 168 (221)
+|++++ .+.+..+++.++++ +. ++++||++++ .+..++.++..+.+++.+++++|+++||+.|++.|+|.+ +
T Consensus 80 ~G~l~~---~~~~~~~~~~~~~~--~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L~g~~~~ 154 (271)
T 2i5b_A 80 TGMLPT---VDIIELAAKTIKEK--QLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSGMDEL 154 (271)
T ss_dssp ECCCCS---HHHHHHHHHHHHHT--TCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHHHTCCCC
T ss_pred ECCCCC---HHHHHHHHHHHHhC--CCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHHhCCCCC
Confidence 999876 35666777888777 77 5999999874 343445666667776448999999999999999999987 7
Q ss_pred CCHHHHHHHHHHHHHcCCCeEEEeeee-eCCc
Q 027620 169 GSEADGREACKILHAAGPAKVVITSIN-IDGN 199 (221)
Q Consensus 169 ~s~~~~~~a~~~L~~~G~~~VvVT~G~-~~~~ 199 (221)
.+.++..+++++|.++|++.|+||+|+ .+|.
T Consensus 155 ~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~g~ 186 (271)
T 2i5b_A 155 KTVDDMIEAAKKIHALGAQYVVITGGGKLKHE 186 (271)
T ss_dssp CSHHHHHHHHHHHHTTTCSEEEEECGGGSCSS
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCC
Confidence 778889999999999999999999999 4675
No 9
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.82 E-value=1e-18 Score=145.45 Aligned_cols=177 Identities=25% Similarity=0.351 Sum_probs=126.8
Q ss_pred CCeEEEEeccCccCccchhhcHHHHHhcCCceeeeeeE-EeecCCCCCccceeeCCHHHHHHHHHHHHhcCcccccEEEE
Q 027620 14 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSV-QFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLT 92 (221)
Q Consensus 14 ~~~vl~i~~~~~~G~vG~d~~~~~l~~~gi~~~~v~~~-~~~~~~~~~~~~G~~l~~~~i~~~l~~i~~~~~l~~~~v~~ 92 (221)
||+||+|.|+|..|..|..+++..++..|.....+.+. ..+++..+.. ...++++.+.+.++.+... +.++++++
T Consensus 1 ~~~vl~i~G~d~~ggag~~a~~~~~~~~~~~g~~~vt~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~v~~ 76 (258)
T 1ub0_A 1 MRVALTIAGSDSGGGAGVQADLKVFFRFGVYGTSALTLVTAQNTLGVQR--VHLLPPEVVYAQIESVAQD--FPLHAAKT 76 (258)
T ss_dssp CCEEEEEEEEETTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTEEEE--EEECCHHHHHHHHHHHHHH--SCCSEEEE
T ss_pred CCEEEEEeccCCCchHHHHHHHHHHHHhCCEEeEeeeEEEeecCCceeE--EEeCCHHHHHHHHHHHHcC--CCCCEEEE
Confidence 68999999999999999999899999999866555544 3334333221 2356666665544443221 13567899
Q ss_pred eecCChhHHHHHHHHHHHHHhcCCC-CeEEEcccccC-CCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCCCCCC
Q 027620 93 GYIGSVSFLNTILQVVEKLRSINPN-LIYVCDPVMGD-EGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGS 170 (221)
Q Consensus 93 G~l~~~~~~~~i~~~i~~ak~~~~~-~~vvlDp~~~~-~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~~~~s 170 (221)
|++++ .+.+..+++.++++ + .++++||+++. .|..+++++..+.+++.+++++|+++||+.|++.|+|.++.+
T Consensus 77 G~l~~---~~~~~~~~~~~~~~--~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g~~~~~ 151 (258)
T 1ub0_A 77 GALGD---AAIVEAVAEAVRRF--GVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLGRPIRT 151 (258)
T ss_dssp CCCCS---HHHHHHHHHHHHHT--TCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHCSCCCS
T ss_pred CCcCC---HHHHHHHHHHHHhC--CCCcEEECCeeecCCCCcccChHHHHHHHHhhcccCeEEeCCHHHHHHHhCCCCCC
Confidence 99874 35566677777776 6 79999999874 454455655556675458999999999999999999998878
Q ss_pred HHHHHHHHHHHHHcCCCeEEEeeeeeCCc
Q 027620 171 EADGREACKILHAAGPAKVVITSINIDGN 199 (221)
Q Consensus 171 ~~~~~~a~~~L~~~G~~~VvVT~G~~~~~ 199 (221)
.++..+++++|.++|++.|+||+|+.+|.
T Consensus 152 ~~~~~~~a~~l~~~g~~~vvvt~g~~~G~ 180 (258)
T 1ub0_A 152 LKEAEEAAKALLALGPKAVLLKGGHLEGE 180 (258)
T ss_dssp HHHHHHHHHHHHTTSCSCEEEEEEECC--
T ss_pred HHHHHHHHHHHHHcCCCEEEEccCCCCCC
Confidence 88899999999999999999999994363
No 10
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.80 E-value=4.6e-18 Score=144.25 Aligned_cols=178 Identities=17% Similarity=0.196 Sum_probs=128.6
Q ss_pred CCCCCeEEEEeccCccCccchhhcHHHHHhcCCceeeeeeE-EeecCCCCCccceeeCCHHHHHHHHHHHHhcCcccccE
Q 027620 11 PSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSV-QFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTH 89 (221)
Q Consensus 11 ~~~~~~vl~i~~~~~~G~vG~d~~~~~l~~~gi~~~~v~~~-~~~~~~~~~~~~G~~l~~~~i~~~l~~i~~~~~l~~~~ 89 (221)
+.++|.+|++.|+|..|..|.+.++..++..|.....+.+. ..+++..+.. -..++++.+++.++.+... +.+++
T Consensus 22 ~~~~~~vl~i~G~D~~ggagi~a~~~~~~~~g~~g~~~it~~~~~n~~~~~~--~~~~~~~~~~~~~~~l~~~--~~~~~ 97 (288)
T 1jxh_A 22 HMQRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAENTCGVQS--VYRIEPDFVAAQLDSVFSD--VRIDT 97 (288)
T ss_dssp -CCCCEEEEEEECCTTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTEEEE--EEECCHHHHHHHHHHHHTT--SCCSE
T ss_pred CCCCCEEEEEeCcCCCchHHHHHHHHHHHHcCCEEeEEeeEEEeecCCCeee--eeeCCHHHHHHHHHHHHhC--CCCCE
Confidence 46788999999999999999998888888888766655544 3334333221 1356666666555444322 13677
Q ss_pred EEEeecCChhHHHHHHHHHHHHHhcCCCCe-EEEccccc-CCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCC-
Q 027620 90 LLTGYIGSVSFLNTILQVVEKLRSINPNLI-YVCDPVMG-DEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGF- 166 (221)
Q Consensus 90 v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~-vvlDp~~~-~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~- 166 (221)
+++|++++ .+.+..+++.++++ +.+ +++||+++ ..|..+++++..+.+++.+++++|+++||+.|++.|+|.
T Consensus 98 v~~G~l~~---~~~~~~~~~~~~~~--~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g~~ 172 (288)
T 1jxh_A 98 TKIGMLAE---TDIVEAVAERLQRH--HVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLDAP 172 (288)
T ss_dssp EEECCCCS---HHHHHHHHHHHHHT--TCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHHTCC
T ss_pred EEECCCCC---HHHHHHHHHHHHHC--CCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhCcEEcCCHHHHHHHcCCC
Confidence 89999863 56777788888887 775 99999987 455555666656666644889999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCC
Q 027620 167 RIGSEADGREACKILHAAGPAKVVITSINIDG 198 (221)
Q Consensus 167 ~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~ 198 (221)
++.+.+++.+++++|.++|++.|+||+|+ +|
T Consensus 173 ~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~-~G 203 (288)
T 1jxh_A 173 HARTEQEMLAQGRALLAMGCEAVLMKGGH-LE 203 (288)
T ss_dssp CCCSHHHHHHHHHHHHHTTCSEEEEBC-----
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEeccC-CC
Confidence 77788889999999999999999999999 45
No 11
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=99.66 E-value=1.5e-15 Score=129.28 Aligned_cols=178 Identities=17% Similarity=0.179 Sum_probs=132.7
Q ss_pred CCeeeccCCCCCCeEEEEecc---------------------------------CccCccchhh---cHHHHHhcCCcee
Q 027620 3 PPILSLALPSETGRVLSIQSH---------------------------------TVQGYVGNKS---AVFPLQLLGYDVD 46 (221)
Q Consensus 3 ~~~~~~~~~~~~~~vl~i~~~---------------------------------~~~G~vG~d~---~~~~l~~~gi~~~ 46 (221)
++|+|+++|+....++.+... ..+|.+|+|. .++.|+++||+++
T Consensus 2 ~~i~~v~~n~~~D~~~~v~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d~g~~i~~~l~~~gv~~~ 81 (309)
T 3umo_A 2 VRIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGATGEHLVSLLADENVPVA 81 (309)
T ss_dssp CCEEEECSSCEEEEEEEESCCCSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHHTTCCEE
T ss_pred CcEEEEecchhheEEEEcCcccCCCeEEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCchHHHHHHHHHHcCCceE
Confidence 679999999988888776531 1377888775 5567999999999
Q ss_pred eeeeEEeecCCCCCc------------cceeeCCHHHHHHHHHHHHhcCccccc-EEEEeecCChhHHHHHHHHHHHHHh
Q 027620 47 PIHSVQFSNHTGYPT------------FKGQVLNGQQLCDLIEGLEANNLLYYT-HLLTGYIGSVSFLNTILQVVEKLRS 113 (221)
Q Consensus 47 ~v~~~~~~~~~~~~~------------~~G~~l~~~~i~~~l~~i~~~~~l~~~-~v~~G~l~~~~~~~~i~~~i~~ak~ 113 (221)
++.... .+.+.+.. ..|..+++++++.+++.++... ..+ +++.|+++.+.+.+.+.++++.+++
T Consensus 82 ~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~a~~ 158 (309)
T 3umo_A 82 TVEAKD-WTRQNLHVHVEASGEQYRFVMPGAALNEDEFRQLEEQVLEIE--SGAILVISGSLPPGVKLEKLTQLISAAQK 158 (309)
T ss_dssp EEECSS-CCCCCEEEEETTTCCEEEEECCCCCCCHHHHHHHHHHHTTSC--TTCEEEEESCCCTTCCHHHHHHHHHHHHH
T ss_pred EEEecC-CCeeEEEEEECCCCcEEEEEcCCCCCCHHHHHHHHHHHHhcC--CCCEEEEEccCCCCCCHHHHHHHHHHHHh
Confidence 886432 22222211 1245688888877766654221 133 4578888877778899999999999
Q ss_pred cCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCC--ceEEecCHHHHHHhcCCCCCCHHHHHHHHHHHHHcCC-CeEE
Q 027620 114 INPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPV--ASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGP-AKVV 190 (221)
Q Consensus 114 ~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~--~dvi~pN~~Ea~~l~g~~~~s~~~~~~a~~~L~~~G~-~~Vv 190 (221)
+ ++++++||.+ +.+++ +++. +|+++||++|++.|+|.+..+.+++.++++.|.++|+ +.|+
T Consensus 159 ~--~~~v~~D~~~-------------~~l~~-~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~~vv 222 (309)
T 3umo_A 159 Q--GIRCIVDSSG-------------EALSA-ALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRVV 222 (309)
T ss_dssp T--TCEEEEECCH-------------HHHHH-HTSSCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHHHTTSBSCEE
T ss_pred c--CCEEEEECCc-------------HHHHH-HhccCCCeEEEeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCcEEE
Confidence 8 8999999942 12333 6666 6999999999999999988778899999999999997 8999
Q ss_pred EeeeeeCCcE
Q 027620 191 ITSINIDGNL 200 (221)
Q Consensus 191 VT~G~~~~~~ 200 (221)
||+|+ +|..
T Consensus 223 vt~G~-~G~~ 231 (309)
T 3umo_A 223 VSLGP-QGAL 231 (309)
T ss_dssp EECGG-GCEE
T ss_pred EEcCc-ccEE
Confidence 99998 6643
No 12
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=99.59 E-value=1.1e-15 Score=130.80 Aligned_cols=161 Identities=17% Similarity=0.145 Sum_probs=112.1
Q ss_pred CccCccchhh----cHHHHHhcCCceeeeeeEE-eecCCCCCcc-----------cee-----eCCHHHHHHHHHHHHhc
Q 027620 24 TVQGYVGNKS----AVFPLQLLGYDVDPIHSVQ-FSNHTGYPTF-----------KGQ-----VLNGQQLCDLIEGLEAN 82 (221)
Q Consensus 24 ~~~G~vG~d~----~~~~l~~~gi~~~~v~~~~-~~~~~~~~~~-----------~G~-----~l~~~~i~~~l~~i~~~ 82 (221)
..+|.+|+|. .++.|+++||+++++.... .+|...+..+ .|. .+++++++...+.++..
T Consensus 51 ~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (319)
T 3lhx_A 51 HYVTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSAAICEELANF 130 (319)
T ss_dssp EEECEECSSHHHHHHHHHHHTTTEECTTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHHHHHHHHTTC
T ss_pred EEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchhhHHHHhcCC
Confidence 3578899886 5567999999998876442 1121111111 121 24555566666667655
Q ss_pred CcccccEEEEeecC---ChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCc-hhHHHHHHHhcCCCceEEecCHH
Q 027620 83 NLLYYTHLLTGYIG---SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVP-SELVSVYREKVVPVASMLTPNQF 158 (221)
Q Consensus 83 ~~l~~~~v~~G~l~---~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~-~~~~~~l~~~ll~~~dvi~pN~~ 158 (221)
+++ ++.|+.+ ++.+.+.+.++++.++++ ++++++||+++.. +|.+ +...+.+++ +++++|+++||++
T Consensus 131 ~~v----~~~g~~~~~l~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~--~~~~~~~~~~~~~~-ll~~~di~~~n~~ 201 (319)
T 3lhx_A 131 DYL----YLSGISLAILSPTSREKLLSLLRECRAK--GGKVIFDNNYRPR--LWASKEETQQVYQQ-MLECTDIAFLTLD 201 (319)
T ss_dssp SEE----EEEHHHHHTSCHHHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GSSCHHHHHHHHHH-HHTTCSEEEEEHH
T ss_pred CEE----EEcCchhhhcCchhHHHHHHHHHHHHhc--CCEEEEeCcCCcc--cccCHHHHHHHHHH-HHhhCCcccCCHH
Confidence 542 3455532 355678899999999998 8999999986532 2333 333445555 8999999999999
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCc
Q 027620 159 EAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGN 199 (221)
Q Consensus 159 Ea~~l~g~~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~ 199 (221)
|++.|+|. +++++++++|.++|++.|+||+|+ +|.
T Consensus 202 E~~~l~g~-----~~~~~~~~~l~~~g~~~vvvt~G~-~G~ 236 (319)
T 3lhx_A 202 DEDALWGQ-----QPVEDVIARTHNAGVKEVVVKRGA-DSC 236 (319)
T ss_dssp HHHHHHCC-----CCHHHHHHHHHHTTCSEEEEEETT-EEE
T ss_pred HHHHHhCC-----CCHHHHHHHHHhcCCCEEEEEECC-CCe
Confidence 99999997 367788899999999999999998 554
No 13
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=99.58 E-value=7.8e-15 Score=124.52 Aligned_cols=153 Identities=14% Similarity=0.258 Sum_probs=113.4
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEE-eecCC--------CC---Cccce--eeCCHHHHHHHHHHHHhcCccc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ-FSNHT--------GY---PTFKG--QVLNGQQLCDLIEGLEANNLLY 86 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~-~~~~~--------~~---~~~~G--~~l~~~~i~~~l~~i~~~~~l~ 86 (221)
.+|.+|+|. .++.|+++||+++++.... .+|.. +- ....| ..+++++++...+.++..++
T Consensus 59 ~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~-- 136 (304)
T 3ry7_A 59 FITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVINAKDAIINADF-- 136 (304)
T ss_dssp EECEEESSCTTHHHHHHHHHTTCBCTTCEEESSSCCEEEEEEECSSCCEEEEEECGGGGGCCHHHHHTTHHHHHTCSE--
T ss_pred EEEEeCCChHHHHHHHHHHHcCCcchhEEEcCCCCCcEEEEEECCCCCEEEEEecCchhcCCHHHHHHHHHHhccCCE--
Confidence 588899886 5567999999998876542 11111 10 11112 36788888776666765554
Q ss_pred ccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCC
Q 027620 87 YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGF 166 (221)
Q Consensus 87 ~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~ 166 (221)
+.++. +.+.+.+.++++.++++ +.++++||.+... +. . .+++++|+++||++|++.|+|.
T Consensus 137 ---v~~~~---~~~~~~~~~~~~~a~~~--~~~v~~D~~~~~~---~~--------~-~ll~~~dil~~N~~E~~~l~g~ 196 (304)
T 3ry7_A 137 ---VVAQL---EVPIPAIISAFEIAKAH--GVTTVLNPAPAKA---LP--------N-ELLSLIDIIVPNETEAELLSGI 196 (304)
T ss_dssp ---EEEET---TSCHHHHHHHHHHHHHT--TCEEEEECCSCCC---CC--------H-HHHTTCSEECCBHHHHHHHHSC
T ss_pred ---EEEcC---CCCHHHHHHHHHHHHHc--CCEEEEeCCcccc---cc--------H-HHHHhCCEEecCHHHHHHHhCC
Confidence 44432 34577888899999988 8999999975422 11 1 3789999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCcE
Q 027620 167 RIGSEADGREACKILHAAGPAKVVITSINIDGNL 200 (221)
Q Consensus 167 ~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~ 200 (221)
+..+.+++.+++++|+++|++.|+||+|+ +|..
T Consensus 197 ~~~~~~~~~~~~~~l~~~g~~~vvvt~G~-~G~~ 229 (304)
T 3ry7_A 197 KVTNEQSMKDNANYFLSIGIKTVLITLGK-QGTY 229 (304)
T ss_dssp CCCSHHHHHHHHHHHHHTTCCEEEEECGG-GCEE
T ss_pred CCCChhHHHHHHHHHHHcCCCEEEEEeCC-CceE
Confidence 88888899999999999999999999998 6653
No 14
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=99.57 E-value=5.8e-15 Score=125.66 Aligned_cols=153 Identities=24% Similarity=0.354 Sum_probs=110.6
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEE-eecCC--------C---CCcccee--eCCHHHHHHHHHHHHhcCccc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ-FSNHT--------G---YPTFKGQ--VLNGQQLCDLIEGLEANNLLY 86 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~-~~~~~--------~---~~~~~G~--~l~~~~i~~~l~~i~~~~~l~ 86 (221)
.+|.+|+|. .++.|+++||+++++.... .+|.. + +....|. .+++++++...+.++..++
T Consensus 60 ~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-- 137 (309)
T 1rkd_A 60 FIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEAQRERIANASA-- 137 (309)
T ss_dssp EEEEEESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHTTHHHHHHCSE--
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCccceEecCCCCCceEEEEECCCCCeEEEEeCCchhcCCHHHHHHHHHhcccCCE--
Confidence 588899886 5567999999998876431 11211 1 1111132 6778888765556665554
Q ss_pred ccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCC
Q 027620 87 YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGF 166 (221)
Q Consensus 87 ~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~ 166 (221)
+.++. +.+.+.+.++++.++++ ++++++||++... + .. .+++++|+++||++|++.|+|.
T Consensus 138 ---v~~~~---~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~---~-~~--------~ll~~~dil~~N~~E~~~l~g~ 197 (309)
T 1rkd_A 138 ---LLMQL---ESPLESVMAAAKIAHQN--KTIVALNPAPARE---L-PD--------ELLALVDIITPNETEAEKLTGI 197 (309)
T ss_dssp ---EEECS---SSCHHHHHHHHHHHHHT--TCEEEECCCSCCC---C-CH--------HHHTTCSEECCCHHHHHHHHSC
T ss_pred ---EEEeC---CCCHHHHHHHHHHHHHc--CCEEEEECCcccc---c-hH--------HHHhhCCEEEcCHHHHHHHhCC
Confidence 33322 22357778888999988 8999999987532 2 11 3788999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCcE
Q 027620 167 RIGSEADGREACKILHAAGPAKVVITSINIDGNL 200 (221)
Q Consensus 167 ~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~ 200 (221)
+..+.+++.+++++|+++|++.|+||+|+ +|..
T Consensus 198 ~~~~~~~~~~~~~~l~~~g~~~vvvt~G~-~G~~ 230 (309)
T 1rkd_A 198 RVENDEDAAKAAQVLHEKGIRTVLITLGS-RGVW 230 (309)
T ss_dssp CCSSHHHHHHHHHHHHHTTCSEEEEECGG-GCEE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEEECC-CcEE
Confidence 87777889999999999999999999999 6653
No 15
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=99.55 E-value=9.6e-15 Score=126.30 Aligned_cols=161 Identities=13% Similarity=0.097 Sum_probs=112.3
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEEeecCCC-------------CCcc-c-----eeeCCHHHHHHHHHHHHh
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTG-------------YPTF-K-----GQVLNGQQLCDLIEGLEA 81 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~~~~~~~-------------~~~~-~-----G~~l~~~~i~~~l~~i~~ 81 (221)
.+|.+|+|. .++.|+++||+++++.... ..|+ +..+ . ...+++++++ ..+.++.
T Consensus 53 ~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~--~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~-~~~~~~~ 129 (346)
T 3ktn_A 53 LITKLPANRLGEAGKAALRKLGISDQWVGEKG--DHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYD-FEAFLAE 129 (346)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCBCTTEEECC--SCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSC-HHHHHTT
T ss_pred EEEecCCCHHHHHHHHHHHHcCCcceEEEeCC--CceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcC-hHHHhCC
Confidence 588899886 5567999999998876432 1111 1111 1 1234555544 1234554
Q ss_pred cCcccccEEEEeecC--ChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCc---hhHHHHHHHhcCCCceEEecC
Q 027620 82 NNLLYYTHLLTGYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVP---SELVSVYREKVVPVASMLTPN 156 (221)
Q Consensus 82 ~~~l~~~~v~~G~l~--~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~---~~~~~~l~~~ll~~~dvi~pN 156 (221)
.+++ ++.|+.+ ++.+.+.+.++++.++++ ++++++||+.+.. +|.. ++..+.+++ +++++|+++||
T Consensus 130 ~~~v----~~~g~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~r~~--~~~~~~~~~~~~~~~~-ll~~~dil~~N 200 (346)
T 3ktn_A 130 VDMV----HICGISLSLTEKTRDAALILAQKAHAY--QKKVCFDFNYRPS--LNTANSALFMRQQYER-ILPYCDIVFGS 200 (346)
T ss_dssp CSEE----EECTHHHHHCHHHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GCCHHHHHHHHHHHHH-HGGGCSEEECC
T ss_pred CCEE----EEeCccccCCHHHHHHHHHHHHHHHHc--CCEEEEeCCCChH--HcCCccHHHHHHHHHH-HHHhCCEEEcc
Confidence 4432 3446553 455568899999999988 8999999987643 2322 445566776 89999999999
Q ss_pred HHHHHHhcCCC-CC---CHHHHHHHHHHHHHc-CCCeEEEeeeeeCC
Q 027620 157 QFEAEQLTGFR-IG---SEADGREACKILHAA-GPAKVVITSINIDG 198 (221)
Q Consensus 157 ~~Ea~~l~g~~-~~---s~~~~~~a~~~L~~~-G~~~VvVT~G~~~~ 198 (221)
++|++.|+|.+ .. +.+++.+++++|.++ |++.|+||+|+ +|
T Consensus 201 ~~E~~~l~g~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~-~G 246 (346)
T 3ktn_A 201 RRDLVELLGFIPREDLEGEAQETELIQRFMSQYNLEWFAGTTRS-HS 246 (346)
T ss_dssp HHHHHHTSCCCCCTTSCHHHHHHHHHHHHHHHHTCSEEEEEEEE-EC
T ss_pred HHHHHHHhCCCCCccccchHHHHHHHHHHHHhcCCCEEEEecCc-cc
Confidence 99999999986 32 557888999999875 99999999999 55
No 16
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=99.55 E-value=1.7e-14 Score=124.20 Aligned_cols=154 Identities=21% Similarity=0.186 Sum_probs=111.2
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEE-eecCCCCC-----------cccee--eCCHHHHHHHHHHHHhcCccc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ-FSNHTGYP-----------TFKGQ--VLNGQQLCDLIEGLEANNLLY 86 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~-~~~~~~~~-----------~~~G~--~l~~~~i~~~l~~i~~~~~l~ 86 (221)
.+|.+|+|. .++.|+++||+++++.... .+|...+. ...|. .+++++++...+.++..+
T Consensus 80 ~i~~vG~D~~G~~l~~~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~l~~~~~~~~~~~l~~~~--- 156 (331)
T 2fv7_A 80 MVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRAAANVISRAK--- 156 (331)
T ss_dssp EEEEEESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHHTHHHHHHCS---
T ss_pred EEEEECCChhHHHHHHHHHHcCCcceeeEecCCCCCceEEEEECCCCCeEEEecCCccccCCHHHHHHHHHhhccCC---
Confidence 588899886 5567999999998876542 11211111 11232 677788776555565544
Q ss_pred ccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCC
Q 027620 87 YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGF 166 (221)
Q Consensus 87 ~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~ 166 (221)
.+.++... +.+.+.++++.++++ ++++++||+++.. .+. . .+++++|+++||++|++.|+|.
T Consensus 157 --~v~~~~~~---~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~--~~~-~--------~ll~~~dil~~N~~Ea~~l~g~ 218 (331)
T 2fv7_A 157 --VMVCQLEI---TPATSLEALTMARRS--GVKTLFNPAPAIA--DLD-P--------QFYTLSDVFCCNESEAEILTGL 218 (331)
T ss_dssp --EEEECSSS---CHHHHHHHHHHHHHT--TCEEEECCCSCCT--TCC-T--------HHHHTCSEEEEEHHHHHHHHSS
T ss_pred --EEEEecCC---CHHHHHHHHHHHHHc--CCEEEEeCCcccc--cch-H--------HHHhcCCEEEeCHHHHHHHhCC
Confidence 34554322 347778888999988 8999999987632 122 1 3778999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCcE
Q 027620 167 RIGSEADGREACKILHAAGPAKVVITSINIDGNL 200 (221)
Q Consensus 167 ~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~ 200 (221)
+..+.+++.+++++|.++|++.|+||+|+ +|..
T Consensus 219 ~~~~~~~~~~~~~~l~~~g~~~VvvT~G~-~G~~ 251 (331)
T 2fv7_A 219 TVGSAADAGEAALVLLKRGCQVVIITLGA-EGCV 251 (331)
T ss_dssp CCCSHHHHHHHHHHHHTTTCSEEEEECGG-GCEE
T ss_pred CCCChhHHHHHHHHHHHcCCCEEEEEECC-CceE
Confidence 77777889999999999999999999999 6743
No 17
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=99.54 E-value=9.6e-15 Score=126.14 Aligned_cols=159 Identities=16% Similarity=0.190 Sum_probs=109.6
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEE-eecC--------CC-CCcc-----c--eeeCCHHHHHHHHHHHHhcC
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ-FSNH--------TG-YPTF-----K--GQVLNGQQLCDLIEGLEANN 83 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~-~~~~--------~~-~~~~-----~--G~~l~~~~i~~~l~~i~~~~ 83 (221)
.+|.+|+|. .++.|+++||+++++.... .+|. .+ -..+ . ...+++++++. +.++..+
T Consensus 77 ~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~--~~l~~~~ 154 (336)
T 4du5_A 77 WASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDE--AWLLSAR 154 (336)
T ss_dssp EEEEECSSHHHHHHHHHHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCH--HHHTTEE
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCH--hHhccCC
Confidence 578899886 5567999999999886542 1111 11 0001 0 12455555543 2344433
Q ss_pred cccccEEEEeecC--ChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchh-HHHHHHHhcCCCceEEecCHHHH
Q 027620 84 LLYYTHLLTGYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSE-LVSVYREKVVPVASMLTPNQFEA 160 (221)
Q Consensus 84 ~l~~~~v~~G~l~--~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~-~~~~l~~~ll~~~dvi~pN~~Ea 160 (221)
+ ..+.|+.+ ++.+.+.+.++++.++++ ++++++||+++.. +|...+ ..+.+++ +++++|+++||++|+
T Consensus 155 ~----v~~~g~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~--~~~~~~~~~~~~~~-ll~~~dil~pN~~Ea 225 (336)
T 4du5_A 155 H----LHATGVFPAISATTLPAARKTMDLMRAA--GRSVSFDPNLRPT--LWATPELMRDAIND-LATRADWVLPGMEEG 225 (336)
T ss_dssp E----EEEESSGGGSCTTHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GSSSHHHHHHHHHH-HHTTCSEECCBHHHH
T ss_pred E----EEEcCchhhCChHHHHHHHHHHHHHHHC--CCEEEEeCcCCch--hcCChHHHHHHHHH-HHHhCCEEECCHHHH
Confidence 3 23467654 556678888999999988 8999999986532 232332 3455555 899999999999999
Q ss_pred HHhcCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCcE
Q 027620 161 EQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNL 200 (221)
Q Consensus 161 ~~l~g~~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~ 200 (221)
+.|+|. ++.+++++.|.++|++.|+||+|+ +|..
T Consensus 226 ~~l~g~-----~~~~~~~~~l~~~g~~~vvvt~G~-~G~~ 259 (336)
T 4du5_A 226 RFLTGE-----TTPEGVARFYRQLGAKLVVVKLGA-EGAY 259 (336)
T ss_dssp HHHHCC-----CSHHHHHHHHHHTTCSEEEEECGG-GCEE
T ss_pred HHHhCC-----CCHHHHHHHHHhcCCCEEEEEecC-CceE
Confidence 999997 356788899999999999999998 6753
No 18
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=99.52 E-value=4e-15 Score=128.08 Aligned_cols=159 Identities=18% Similarity=0.236 Sum_probs=109.9
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEE-eecCCCCCc----------c--ce---eeCCHHHHHHHHHHHHhcCc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ-FSNHTGYPT----------F--KG---QVLNGQQLCDLIEGLEANNL 84 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~-~~~~~~~~~----------~--~G---~~l~~~~i~~~l~~i~~~~~ 84 (221)
.+|.+|+|. .++.|+++||+++++.... .+|...+.. + .+ ..++++++.. +.++..++
T Consensus 56 ~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~~ 133 (330)
T 3iq0_A 56 IISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDE--NILKDCTH 133 (330)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCG--GGGTTEEE
T ss_pred EEEEeCCChHHHHHHHHHHHcCCCeeeEEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCH--hHhccCCE
Confidence 578899885 5567999999999886542 111111110 1 01 1233333322 12333322
Q ss_pred ccccEEEEeecC-ChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHh
Q 027620 85 LYYTHLLTGYIG-SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQL 163 (221)
Q Consensus 85 l~~~~v~~G~l~-~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l 163 (221)
.++.|+.+ ++.+.+.+.++++.++++ ++++++||+.+.. +|.+++..+.+++ +++++|+++||++|++.|
T Consensus 134 ----v~~sg~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~--~~~~~~~~~~~~~-~l~~~dil~~N~~E~~~l 204 (330)
T 3iq0_A 134 ----FHIMGSSLFSFHMVDAVKKAVTIVKAN--GGVISFDPNIRKE--MLDIPEMRDALHF-VLELTDIYMPSEGEVLLL 204 (330)
T ss_dssp ----EEEEGGGCSSHHHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GGGSHHHHHHHHH-HHHTCSEECCBGGGTTTT
T ss_pred ----EEEechhhcCcchHHHHHHHHHHHHHc--CCEEEEcCCCCcc--ccCcHHHHHHHHH-HHhhCCEEecCHHHHHHH
Confidence 24667765 456678889999999988 8999999976542 2333455666666 889999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCcE
Q 027620 164 TGFRIGSEADGREACKILHAAGPAKVVITSINIDGNL 200 (221)
Q Consensus 164 ~g~~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~ 200 (221)
+|. ++.+++++.|+++|++.|+||+|+ +|..
T Consensus 205 ~g~-----~~~~~~~~~l~~~g~~~vvvT~G~-~G~~ 235 (330)
T 3iq0_A 205 SPH-----STPERAIAGFLEEGVKEVIVKRGN-QGAS 235 (330)
T ss_dssp CSC-----SSHHHHHHHHHHHTCSEEEEECGG-GCEE
T ss_pred hCC-----CCHHHHHHHHHHcCCCEEEEEeCC-CceE
Confidence 987 367788899999999999999998 7753
No 19
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=99.52 E-value=1.5e-14 Score=124.53 Aligned_cols=160 Identities=14% Similarity=0.163 Sum_probs=108.6
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEE-eecCCCCCcc----------cee-----eCCHHHHHHHHHHHHhcCc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ-FSNHTGYPTF----------KGQ-----VLNGQQLCDLIEGLEANNL 84 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~-~~~~~~~~~~----------~G~-----~l~~~~i~~~l~~i~~~~~ 84 (221)
.+|.+|+|. .++.|+++||+++++.... .+|...+..+ .|. .++..++.. +.++..++
T Consensus 71 ~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 148 (328)
T 4e69_A 71 YFSAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLYLITLEQGERSFAYWRGQSAARELAGDADALA--AAMARADV 148 (328)
T ss_dssp EECEECSSHHHHHHHHHHHHTTEECTTCEECTTCCCEEEEEEEETTEEEEEEECTTCGGGGTTSCHHHHH--HHHTTCSE
T ss_pred EEEeeCCCHHHHHHHHHHHHcCCccceEEEcCCCCCeEEEEEecCCceEEEEeCCCCHHHhhcCccccch--HHhcCCCE
Confidence 578899886 5567999999998775432 1111111111 111 122223222 44554443
Q ss_pred ccccEEEEeecC---ChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCc-hhHHHHHHHhcCCCceEEecCHHHH
Q 027620 85 LYYTHLLTGYIG---SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVP-SELVSVYREKVVPVASMLTPNQFEA 160 (221)
Q Consensus 85 l~~~~v~~G~l~---~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~-~~~~~~l~~~ll~~~dvi~pN~~Ea 160 (221)
+ ++.|+.+ ++.+.+.+.++++.++++ ++++++||++++. +|.+ ++..+.+++ +++++|+++||++|+
T Consensus 149 v----~~~g~~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~--~~~~~~~~~~~~~~-ll~~~dil~~N~~E~ 219 (328)
T 4e69_A 149 V----YFSGITLAILDQCGRATLLRALAQARAT--GRTIAFDPNLRPR--LWAGTGEMTETIMQ-GAAVSDIALPSFEDE 219 (328)
T ss_dssp E----EEEHHHHHTSCHHHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GCSCHHHHHHHHHH-HHTTCSEECCBHHHH
T ss_pred E----EECCchhhccCchHHHHHHHHHHHHHhC--CCEEEEeCCCChh--hcCCHHHHHHHHHH-HHHhCCEEeCCHHHH
Confidence 2 3455432 466788899999999988 8999999986543 2322 334455555 899999999999999
Q ss_pred HHhcCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCcEE
Q 027620 161 EQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLF 201 (221)
Q Consensus 161 ~~l~g~~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~~ 201 (221)
+.|+|.+ +++++++.|.++|++.|+||+|+ +|..+
T Consensus 220 ~~l~g~~-----~~~~~~~~l~~~g~~~vvvt~G~-~G~~~ 254 (328)
T 4e69_A 220 AAWFGDA-----GPDATADRYARAGVRSVVVKNGP-HAVHF 254 (328)
T ss_dssp HHHHTCS-----SHHHHHHHHHTTTCSEEEEBCTT-SCEEE
T ss_pred HHHcCCC-----CHHHHHHHHHhcCCCEEEEEeCC-CCeEE
Confidence 9999973 67888899999999999999998 77543
No 20
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=99.51 E-value=2.2e-13 Score=115.86 Aligned_cols=157 Identities=17% Similarity=0.155 Sum_probs=112.7
Q ss_pred ccCccchhh---cHHHHHhcCCceeeeeeEEeecCCCCCc-c-----------ceeeCCHHHHHHHHHHHHhcCcccccE
Q 027620 25 VQGYVGNKS---AVFPLQLLGYDVDPIHSVQFSNHTGYPT-F-----------KGQVLNGQQLCDLIEGLEANNLLYYTH 89 (221)
Q Consensus 25 ~~G~vG~d~---~~~~l~~~gi~~~~v~~~~~~~~~~~~~-~-----------~G~~l~~~~i~~~l~~i~~~~~l~~~~ 89 (221)
.+|.+|+|. .++.|+++||+++++.... .+.+.+.. + .|..+++++++.+.+.+... .-. +.
T Consensus 57 ~i~~vG~d~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~-~~ 133 (309)
T 3cqd_A 57 AIFPAGGATGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGAALNEDEFRQLEEQVLEI-ESG-AI 133 (309)
T ss_dssp EEEEECHHHHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCCCCCHHHHHHHHHHHHTS-CTT-CE
T ss_pred EEEEecCchHHHHHHHHHHcCCCceeEEcCC-CCeeEEEEEEcCCCCEEEEEcCCCCCCHHHHHHHHHHHHHh-hcC-CE
Confidence 467888765 4567999999999885432 13332221 1 14467777777765544321 112 43
Q ss_pred -EEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCc-eEEecCHHHHHHhcCCC
Q 027620 90 -LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVA-SMLTPNQFEAEQLTGFR 167 (221)
Q Consensus 90 -v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~-dvi~pN~~Ea~~l~g~~ 167 (221)
++.|+++...+.+.+.++++.++++ +.++++||+.. .+++.+.+.+ |+++||++|++.|+|.+
T Consensus 134 v~~~g~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~-------------~~~~~l~~~~~dil~~N~~E~~~l~g~~ 198 (309)
T 3cqd_A 134 LVISGSLPPGVKLEKLTQLISAAQKQ--GIRCIVDSSGE-------------ALSAALAIGNIELVKPNQKELSALVNRE 198 (309)
T ss_dssp EEEESCCCTTCCHHHHHHHHHHHHTT--TCEEEEECCHH-------------HHHHHTTTCCBSEECCBHHHHHHHHTSC
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHc--CCeEEEECChH-------------HHHHHHHhCCCEEEeeCHHHHHHHhCCC
Confidence 4668887666678888999999988 89999999421 1222244788 99999999999999987
Q ss_pred CCCHHHHHHHHHHHHHcC-CCeEEEeeeeeCCcE
Q 027620 168 IGSEADGREACKILHAAG-PAKVVITSINIDGNL 200 (221)
Q Consensus 168 ~~s~~~~~~a~~~L~~~G-~~~VvVT~G~~~~~~ 200 (221)
..+.+++.+++++|+++| ++.|+||+|+ +|..
T Consensus 199 ~~~~~~~~~~~~~l~~~g~~~~vvvt~G~-~G~~ 231 (309)
T 3cqd_A 199 LTQPDDVRKAAQEIVNSGKAKRVVVSLGP-QGAL 231 (309)
T ss_dssp CCSTTHHHHHHHHHHHTTSBSCEEEECGG-GCEE
T ss_pred CCCHHHHHHHHHHHHHcCCCCEEEEEecC-CceE
Confidence 777788889999999999 9999999999 6753
No 21
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=99.51 E-value=2.9e-14 Score=122.60 Aligned_cols=154 Identities=21% Similarity=0.230 Sum_probs=107.1
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEE-eecCCCCCc----------cc--e--eeCCHHHHHHHHHHHHhcCcc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ-FSNHTGYPT----------FK--G--QVLNGQQLCDLIEGLEANNLL 85 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~-~~~~~~~~~----------~~--G--~~l~~~~i~~~l~~i~~~~~l 85 (221)
.+|.+|+|. .++.|+++||+++.+.... .+|...+.. +. + ..++++.++...+.+...+++
T Consensus 61 ~i~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (328)
T 3kzh_A 61 FMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIADMKSIGAMNTDFIDSKREIFENAEYT 140 (328)
T ss_dssp EECEECSSHHHHHHHHHHHHHTEECTTCEECTTCCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHHHTHHHHHTCSEE
T ss_pred EEEEecCcHHHHHHHHHHHHcCCCccceEEeCCCCCeeEEEEEcCCCCEEEEEEchhhhhhCCHHHHHHHHHhhccCCEE
Confidence 588899886 5567999999988765431 112111110 10 1 256677776655666655442
Q ss_pred cccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcC
Q 027620 86 YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (221)
Q Consensus 86 ~~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g 165 (221)
++.|.+ + +.+..+++ ++++ +++|++||++.. ..+.+++ +++++|+++||++|++.|+|
T Consensus 141 ----~~~~~~----~-~~~~~l~~-a~~~--~~~v~~D~~~~~---------~~~~~~~-~l~~~dil~~N~~E~~~l~g 198 (328)
T 3kzh_A 141 ----VLDSDN----P-EIMEYLLK-NFKD--KTNFILDPVSAE---------KASWVKH-LIKDFHTIKPNRHEAEILAG 198 (328)
T ss_dssp ----EEESSC----H-HHHHHHHH-HHTT--TSEEEEECCSHH---------HHHTSTT-TGGGCSEECCBHHHHHHHHT
T ss_pred ----EEeCCc----H-HHHHHHHH-Hhhc--CCcEEEEeCCHH---------HHHHHHH-HhcCCcEEeCCHHHHHHHHC
Confidence 344443 2 55666666 7766 899999996421 1222333 78899999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCcEE
Q 027620 166 FRIGSEADGREACKILHAAGPAKVVITSINIDGNLF 201 (221)
Q Consensus 166 ~~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~~ 201 (221)
.+..+.+++.++++.|.++|++.|+||+|+ +|..+
T Consensus 199 ~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~-~G~~~ 233 (328)
T 3kzh_A 199 FPITDTDDLIKASNYFLGLGIKKVFISLDA-DGIFY 233 (328)
T ss_dssp SCCCSHHHHHHHHHHHHHHTCCEEEEECGG-GCEEE
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEEEEeCC-CCEEE
Confidence 988888899999999999999999999999 67533
No 22
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=99.49 E-value=1.3e-14 Score=127.09 Aligned_cols=161 Identities=11% Similarity=0.087 Sum_probs=114.6
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeE-EeecC-------CC---CCccce--eeCCHHHHHH--HHHHHHhcCcc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSV-QFSNH-------TG---YPTFKG--QVLNGQQLCD--LIEGLEANNLL 85 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~-~~~~~-------~~---~~~~~G--~~l~~~~i~~--~l~~i~~~~~l 85 (221)
.+|.+|+|. .++.|+++||+++++... ..+|. .+ +....| ..+++++++. ..+.+...+++
T Consensus 103 ~ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~~g~rt~~~~~ga~~~l~~~~~~~~~~~~~~~~~~~v 182 (370)
T 3vas_A 103 YVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVSEKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQVY 182 (370)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEECSSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSEE
T ss_pred EEEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEeCCceeEEEccchhhhCCHHHcCchhhHHHHhhCCEE
Confidence 578888887 556799999999887652 11111 11 111124 4677777764 33456655542
Q ss_pred cccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcC
Q 027620 86 YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (221)
Q Consensus 86 ~~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g 165 (221)
++.|+.+ +.+.+.+.++++.++++ ++++++||... ++.+...+.+++ +++++|+++||++|++.|+|
T Consensus 183 ----~~~g~~~-~~~~~~~~~~~~~a~~~--g~~v~ld~~~~-----~~~~~~~~~l~~-ll~~~dil~~N~~Ea~~l~g 249 (370)
T 3vas_A 183 ----YIAGFVI-NTCYEGMLKIAKHSLEN--EKLFCFNLSAP-----FLSQFNTKEVDE-MISYSNIVFGNESEAEAYGE 249 (370)
T ss_dssp ----EEEGGGH-HHHHHHHHHHHHHHHHT--TCEEEEECCCH-----HHHHHCHHHHHH-HHTTCSEEEEEHHHHHHHHH
T ss_pred ----EEEeeec-cCCHHHHHHHHHHHHHc--CCEEEEECCcH-----HHHHHHHHHHHH-HHhhCCEEEcCHHHHHHHhc
Confidence 4557654 35678889999999998 89999999411 122333455665 89999999999999999998
Q ss_pred CCCCCHHHHHHHHHHHHHc-------CCCeEEEeeeeeCCc
Q 027620 166 FRIGSEADGREACKILHAA-------GPAKVVITSINIDGN 199 (221)
Q Consensus 166 ~~~~s~~~~~~a~~~L~~~-------G~~~VvVT~G~~~~~ 199 (221)
....+.+++++++++|.++ |++.|+||+|+ +|.
T Consensus 250 ~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~VvvT~G~-~Ga 289 (370)
T 3vas_A 250 VHGLLEDTVHATARYIADLPFADGKKRKRLVIITRGK-NPL 289 (370)
T ss_dssp HTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETT-EEE
T ss_pred ccCCCccCHHHHHHHHHhhcccccccCCCEEEEecCC-Cce
Confidence 7655667899999999885 99999999998 564
No 23
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=99.48 E-value=6.6e-13 Score=112.81 Aligned_cols=157 Identities=16% Similarity=0.178 Sum_probs=113.0
Q ss_pred ccCccchhh---cHHHHHhcCCceeeeeeEE-------eecCCCCC-ccceeeCCHHHHHHHHHHHHhcCcccccE-EEE
Q 027620 25 VQGYVGNKS---AVFPLQLLGYDVDPIHSVQ-------FSNHTGYP-TFKGQVLNGQQLCDLIEGLEANNLLYYTH-LLT 92 (221)
Q Consensus 25 ~~G~vG~d~---~~~~l~~~gi~~~~v~~~~-------~~~~~~~~-~~~G~~l~~~~i~~~l~~i~~~~~l~~~~-v~~ 92 (221)
.+|.+|++. .++.|+++||+++++.... ..+...+. ...|..+++++++...+.+.... ..+. ++.
T Consensus 55 ~~~~vG~~~g~~i~~~L~~~gv~~~~v~~~~~t~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~v~~~ 132 (306)
T 2abq_A 55 ALGFLGGFTGAYVRNALEKEEIGLSFIEVEGDTRINVKIKGKQETELNGTAPLIKKEHVQALLEQLTELE--KGDVLVLA 132 (306)
T ss_dssp EEEEEEHHHHHHHHHHHHHTTCEECCEEESSCCEEEEEEESSSCEEEBCCCCCCCHHHHHHHHHHHTTCC--TTCEEEEE
T ss_pred EEEEecchhHHHHHHHHHHcCCceEEEEcCCCCceEEEEeCCceEEEECCCCCCCHHHHHHHHHHHHhcc--CCCEEEEe
Confidence 467777633 4567999999998875421 01111111 01255788888877665553211 2444 456
Q ss_pred eecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCC-CceEEecCHHHHHHhcCCCCCCH
Q 027620 93 GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP-VASMLTPNQFEAEQLTGFRIGSE 171 (221)
Q Consensus 93 G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~-~~dvi~pN~~Ea~~l~g~~~~s~ 171 (221)
|+++.+.+.+.+.++++.++++ +.++++||+. +.+++ +++ ++|+++||++|++.|+|.+..+.
T Consensus 133 g~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~-------------~~~~~-~l~~~~dil~~N~~E~~~l~g~~~~~~ 196 (306)
T 2abq_A 133 GSVPQAMPQTIYRSMTQIAKER--GAFVAVDTSG-------------EALHE-VLAAKPSFIKPNHHELSELVSKPIASI 196 (306)
T ss_dssp SCCCTTSCTTHHHHHHHHHHTT--TCEEEEECCH-------------HHHHH-HGGGCCSEECCBHHHHHHHHTSCCCSH
T ss_pred cCCCCCCCHHHHHHHHHHHHhc--CCEEEEECCh-------------HHHHH-HHhcCCcEEecCHHHHHHHhCCCCCCH
Confidence 8887655567888899999988 8999999942 12333 788 99999999999999999877778
Q ss_pred HHHHHHHHHHHHcCCCeEEEeeeeeCCcE
Q 027620 172 ADGREACKILHAAGPAKVVITSINIDGNL 200 (221)
Q Consensus 172 ~~~~~a~~~L~~~G~~~VvVT~G~~~~~~ 200 (221)
+++.+++++|.++|++.|+||+|+ +|..
T Consensus 197 ~~~~~~~~~l~~~g~~~vvvt~G~-~G~~ 224 (306)
T 2abq_A 197 EDAIPHVQRLIGEGIESILVSFAG-DGAL 224 (306)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECGG-GCEE
T ss_pred HHHHHHHHHHHHcCCCEEEEecCC-CceE
Confidence 889999999999999999999998 6754
No 24
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=99.48 E-value=6.8e-15 Score=126.95 Aligned_cols=160 Identities=10% Similarity=0.110 Sum_probs=108.1
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEE-eecCCCCCc--------c---c--ee--eCCHHHHHHHHHHHHhcCc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ-FSNHTGYPT--------F---K--GQ--VLNGQQLCDLIEGLEANNL 84 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~-~~~~~~~~~--------~---~--G~--~l~~~~i~~~l~~i~~~~~ 84 (221)
.+|.+|+|. .++.|+++||+++++.... ..|...+.. + . |. .+++++++. +.++..++
T Consensus 55 ~ig~vG~D~~g~~l~~~l~~~gV~~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~--~~~~~~~~ 132 (338)
T 3ljs_A 55 FVGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQD--ASFSDALI 132 (338)
T ss_dssp EESEEESSHHHHHHHHHHHHHTCBCTTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCH--HHHHTEEE
T ss_pred EEeeccCCHHHHHHHHHHHHcCCCceeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCH--hHhcCCCE
Confidence 588999986 5567999999999886542 112111111 1 1 21 355555544 23444443
Q ss_pred ccccEEEEe-ecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCC-chhHHHHHHHhcCCCceEEecCHHHHHH
Q 027620 85 LYYTHLLTG-YIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYV-PSELVSVYREKVVPVASMLTPNQFEAEQ 162 (221)
Q Consensus 85 l~~~~v~~G-~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~-~~~~~~~l~~~ll~~~dvi~pN~~Ea~~ 162 (221)
+ .+.| +++++.+.+.+.++++.++++ +++++|||+++.. +|. .+...+.+++ +++++|+++||++|++.
T Consensus 133 ~----~~~~~~l~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~--~~~~~~~~~~~~~~-ll~~~dil~~N~~E~~~ 203 (338)
T 3ljs_A 133 F----HACSNSMTDADIAEVTFEGMRRAQAA--GAIVSFDLNFRPM--LWPNGENPASRLWK-GLSLADVVKLSSEELDY 203 (338)
T ss_dssp E----EEEGGGGSSHHHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GSCTTCCTHHHHHH-HHHTCSEEEEEHHHHHH
T ss_pred E----EECChHhcCchHHHHHHHHHHHHHHc--CCEEEEECCCChh--hcCCHHHHHHHHHH-HHhhCCEEEecHHHHHH
Confidence 2 2333 345677789999999999998 8999999987642 221 1333455665 89999999999999999
Q ss_pred hcCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCc
Q 027620 163 LTGFRIGSEADGREACKILHAAGPAKVVITSINIDGN 199 (221)
Q Consensus 163 l~g~~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~ 199 (221)
|+|.+..+. ++++++|+++|++.|+||+|+ +|.
T Consensus 204 l~g~~~~~~---~~~~~~l~~~g~~~vvvT~G~-~G~ 236 (338)
T 3ljs_A 204 LANTLAADA---NAVIQQLWQGRAQLLLVTDAA-GPV 236 (338)
T ss_dssp HHHHHTSCH---HHHHHHHTTTTCCEEEEEETT-EEE
T ss_pred HhCCCChhH---HHHHHHHHhcCCCEEEEeeCC-Cce
Confidence 998642221 237888889999999999998 554
No 25
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=99.48 E-value=3.2e-14 Score=122.23 Aligned_cols=162 Identities=15% Similarity=0.175 Sum_probs=107.2
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEEeecCCCCC--cc-----------c----eeeCCHHHHHHHHHHHHhcC
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYP--TF-----------K----GQVLNGQQLCDLIEGLEANN 83 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~~~~~~~~~--~~-----------~----G~~l~~~~i~~~l~~i~~~~ 83 (221)
.+|.+|+|. .++.|+++||+++++........+++. .+ . ...+++++++.. .++..+
T Consensus 63 ~i~~vG~D~~G~~l~~~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~--~~~~~~ 140 (332)
T 2qcv_A 63 FIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNEA--YIRRSK 140 (332)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCHH--HHTTEE
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCCcceEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCHH--HHccCC
Confidence 578888886 456799999999887644211223211 10 0 124444444431 233333
Q ss_pred cccccEEEEeecCC-hhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCch-hHHHHHHHhcCCCceEEecCHHHHH
Q 027620 84 LLYYTHLLTGYIGS-VSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPS-ELVSVYREKVVPVASMLTPNQFEAE 161 (221)
Q Consensus 84 ~l~~~~v~~G~l~~-~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~-~~~~~l~~~ll~~~dvi~pN~~Ea~ 161 (221)
+ .++.|+++. +.+.+.+.++++.++++ ++++++||+++.. .|..+ +..+.+++ +++++|+++||++|++
T Consensus 141 ~----v~~~g~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~--~~~~~~~~~~~~~~-ll~~~dil~~N~~E~~ 211 (332)
T 2qcv_A 141 L----LLVSGTALSKSPSREAVLKAIRLAKRN--DVKVVFELDYRPY--SWETPEETAVYYSL-VAEQSDIVIGTREEFD 211 (332)
T ss_dssp E----EEEEGGGGSSTTHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GSSCHHHHHHHHHH-HHHHCSEEEEEHHHHH
T ss_pred E----EEEeCccccCchhHHHHHHHHHHHHHC--CCEEEEcCcCchh--hcCCHHHHHHHHHH-HHHhCCEEEccHHHHH
Confidence 2 235677653 33457888899999988 8999999987532 22222 23334444 8899999999999999
Q ss_pred HhcCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCcE
Q 027620 162 QLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNL 200 (221)
Q Consensus 162 ~l~g~~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~ 200 (221)
.|+|.... ++..+++++|+++|++.|+||+|+ +|..
T Consensus 212 ~l~g~~~~--~~~~~~~~~l~~~g~~~vvvt~G~-~G~~ 247 (332)
T 2qcv_A 212 VLENRTEK--GDNDETIRYLFKHSPELIVIKHGV-EGSF 247 (332)
T ss_dssp HHTTCSSC--CCHHHHHHHHTTSSCSEEEEECGG-GCEE
T ss_pred HHhCCCcC--CCHHHHHHHHHHcCCCEEEEEECC-cceE
Confidence 99997541 345677888889999999999999 7753
No 26
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=99.47 E-value=1.1e-13 Score=119.07 Aligned_cols=158 Identities=13% Similarity=0.140 Sum_probs=109.7
Q ss_pred ccCccchhh---cHHHHHhcCCceeeeeeEEeecCCCCC--------cc--ceeeCCHHHHHHHHHHHHhcCcccccE-E
Q 027620 25 VQGYVGNKS---AVFPLQLLGYDVDPIHSVQFSNHTGYP--------TF--KGQVLNGQQLCDLIEGLEANNLLYYTH-L 90 (221)
Q Consensus 25 ~~G~vG~d~---~~~~l~~~gi~~~~v~~~~~~~~~~~~--------~~--~G~~l~~~~i~~~l~~i~~~~~l~~~~-v 90 (221)
.+|.+|++. .++.|+++||+++++.... .+.+.+. .+ .|..+++++++.+.+.+... .-..+. +
T Consensus 75 ~i~~vG~~~G~~l~~~L~~~gV~~~~v~~~~-~t~~~~~~v~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~v~ 152 (330)
T 2jg1_A 75 ASGFIGGELGQFIAKKLDHADIKHAFYNIKG-ETRNCIAILHEGQQTEILEQGPEIDNQEAAGFIKHFEQM-MEKVEAVA 152 (330)
T ss_dssp EEEEEEHHHHHHHHHHHHHTTCEECCEEESS-CCEEEEEEEETTEEEEEEECCCBCCHHHHHHHHHHHHHH-GGGCSEEE
T ss_pred EEEEecchhHHHHHHHHHHCCCceeEEEccC-CCeeEEEEEeCCCcEEEECCCCCCCHHHHHHHHHHHHHh-cCCCCEEE
Confidence 467788543 5567999999998875431 1111111 01 24568888877665443211 002343 3
Q ss_pred EEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCC---CceEEecCHHHHHHhcCCC
Q 027620 91 LTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP---VASMLTPNQFEAEQLTGFR 167 (221)
Q Consensus 91 ~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~---~~dvi~pN~~Ea~~l~g~~ 167 (221)
+.|+++.+.+.+.+.++++.++++ ++++++||+.. .+++ +++ ++|+++||++|++.|+|.+
T Consensus 153 ~~g~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~-------------~l~~-~l~~~~~~dil~~N~~E~~~l~g~~ 216 (330)
T 2jg1_A 153 ISGSLPKGLNQDYYAQIIERCQNK--GVPVILDCSGA-------------TLQT-VLENPYKPTVIKPNISELYQLLNQP 216 (330)
T ss_dssp EESCCCBTSCTTHHHHHHHHHHTT--TCCEEEECCHH-------------HHHH-HHTSSSCCSEECCBHHHHHHHTTSC
T ss_pred EECCCCCCCCHHHHHHHHHHHHHC--CCEEEEECCcH-------------HHHH-HHhccCCceEEEeCHHHHHHHhCCC
Confidence 468887555567888899999988 89999999421 1233 444 8999999999999999986
Q ss_pred CC-CHHHHHHHHHHHHHcCCCeEEEeeeeeCCcEE
Q 027620 168 IG-SEADGREACKILHAAGPAKVVITSINIDGNLF 201 (221)
Q Consensus 168 ~~-s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~~ 201 (221)
.. +.+++.+++++|+++|++.|+||+|+ +|..+
T Consensus 217 ~~~~~~~~~~~~~~l~~~g~~~VvvT~G~-~Ga~~ 250 (330)
T 2jg1_A 217 LDESLESLKQAVSQPLFEGIEWIIVSLGA-QGAFA 250 (330)
T ss_dssp CCCCHHHHHHHHHSGGGTTCSEEEEECGG-GCEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeecC-CceEE
Confidence 55 67788899999999999999999998 67543
No 27
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=99.47 E-value=1.7e-13 Score=116.31 Aligned_cols=156 Identities=17% Similarity=0.234 Sum_probs=111.3
Q ss_pred ccCccchhh---cHHHHHhcCCceeeeeeEEeecCC------CCC-cc--ceeeCCHHHHHHHHHHHHhcCcccccE-EE
Q 027620 25 VQGYVGNKS---AVFPLQLLGYDVDPIHSVQFSNHT------GYP-TF--KGQVLNGQQLCDLIEGLEANNLLYYTH-LL 91 (221)
Q Consensus 25 ~~G~vG~d~---~~~~l~~~gi~~~~v~~~~~~~~~------~~~-~~--~G~~l~~~~i~~~l~~i~~~~~l~~~~-v~ 91 (221)
.+|.+|++. .++.|+++||+++++.... .+.+ +-. .+ .|..+++++++.+.+.+.... ..+. ++
T Consensus 55 ~~~~vG~~~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~v~~ 131 (306)
T 2jg5_A 55 ALGFAGGFPGKFIIDTLNNSAIQSNFIEVDE-DTRINVKLKTGQETEINAPGPHITSTQFEQLLQQIKNTT--SEDIVIV 131 (306)
T ss_dssp EEEEECHHHHHHHHHHHHHTTCEECCEECSS-CCEEEEEEESSSEEEEECCCCCCCHHHHHHHHHHHTTCC--TTCEEEE
T ss_pred EEEEecCcchHHHHHHHHHCCCceeEEEcCC-CCeEEEEEcCCCEEEEECCCCCCCHHHHHHHHHHHHhcc--CCCEEEE
Confidence 467788743 5567999999998875431 1111 100 11 245688888887766553211 2443 45
Q ss_pred EeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCC-CceEEecCHHHHHHhcCCCCCC
Q 027620 92 TGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP-VASMLTPNQFEAEQLTGFRIGS 170 (221)
Q Consensus 92 ~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~-~~dvi~pN~~Ea~~l~g~~~~s 170 (221)
.|+++...+.+.+.++++.++++ ++++++||+.. .+++ +++ ++|+++||++|++.|+|.+..+
T Consensus 132 ~g~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~-------------~~~~-~l~~~~dil~~N~~E~~~l~g~~~~~ 195 (306)
T 2jg5_A 132 AGSVPSSIPSDAYAQIAQITAQT--GAKLVVDAEKE-------------LAES-VLPYHPLFIKPNKDELEVMFNTTVNS 195 (306)
T ss_dssp ESCCCTTSCTTHHHHHHHHHHHH--CCEEEEECCHH-------------HHHH-HGGGCCSEECCBHHHHHHHTTSCCCS
T ss_pred eCCCCCCCChHHHHHHHHHHHHC--CCEEEEECChH-------------HHHH-HHhcCCeEEecCHHHHHHHhCCCCCC
Confidence 68887655567788889999988 89999999421 1333 566 6999999999999999988777
Q ss_pred HHHHHHHHHHHHHcCCCeEEEeeeeeCCcE
Q 027620 171 EADGREACKILHAAGPAKVVITSINIDGNL 200 (221)
Q Consensus 171 ~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~ 200 (221)
.+++.+++++|.++|++.|+||+|+ +|..
T Consensus 196 ~~~~~~~~~~l~~~g~~~vvvt~G~-~G~~ 224 (306)
T 2jg5_A 196 DADVIKYGRLLVDKGAQSVIVSLGG-DGAI 224 (306)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEECGG-GCEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEccCC-CceE
Confidence 8888899999999999999999999 6643
No 28
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.47 E-value=1.3e-13 Score=119.50 Aligned_cols=160 Identities=14% Similarity=0.106 Sum_probs=108.4
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEEeecCCCCC-------------ccc--e---eeCCHHHHHHHHHHHHhc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYP-------------TFK--G---QVLNGQQLCDLIEGLEAN 82 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~~~~~~~~~-------------~~~--G---~~l~~~~i~~~l~~i~~~ 82 (221)
.+|.+|+|. .++.|+++||+++++.... ..+++. .+. + ..++++++.. .+.++.
T Consensus 63 ~i~~vG~D~~G~~i~~~L~~~gv~~~~v~~~~--~~t~~~~v~~~~~~r~~~v~~~~~~~a~~~~~~~~~~~-~~~~~~- 138 (351)
T 2afb_A 63 FVTKLPNNPLGDAAAGHLRKFGVKTDYIARGG--NRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDW-EKILDG- 138 (351)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCBCTTEEECS--SCCCEEEEECCBTTBCCEEEEECTTCTTTTCCGGGCCH-HHHTTT-
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCcceeEEECC--CcceEEEEEecCCCCcceEEEeCCCChhhhCChhhCCH-HHhhcC-
Confidence 578899886 5567999999998876421 222211 111 1 1233333321 112232
Q ss_pred CcccccEE-EEeecC--ChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHH
Q 027620 83 NLLYYTHL-LTGYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFE 159 (221)
Q Consensus 83 ~~l~~~~v-~~G~l~--~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~E 159 (221)
.+.+ +.|+.+ ++...+.+.++++.++++ ++++++||+++.. +|..++..+.+++ +++++|+++||++|
T Consensus 139 ----~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~--~~~~~~~~~~~~~-ll~~~dil~~N~~E 209 (351)
T 2afb_A 139 ----ARWFHFSGITPPLGKELPLILEDALKVANEK--GVTVSCDLNYRAR--LWTKEEAQKVMIP-FMEYVDVLIANEED 209 (351)
T ss_dssp ----EEEEEEETTSGGGSTTHHHHHHHHHHHHHHH--TCEEEEECCCCTT--TCCHHHHHHHHHH-HGGGCSEEEECHHH
T ss_pred ----CCEEEEeCcccccChhHHHHHHHHHHHHHHc--CCEEEEeCCCchh--cCChHHHHHHHHH-HHhhCCEEEecHHH
Confidence 3434 445554 234468888999999988 8999999987633 2322344456665 89999999999999
Q ss_pred HHHhcCCCCC---------CHHHHHHHHHHHHHc-CCCeEEEeeeeeCC
Q 027620 160 AEQLTGFRIG---------SEADGREACKILHAA-GPAKVVITSINIDG 198 (221)
Q Consensus 160 a~~l~g~~~~---------s~~~~~~a~~~L~~~-G~~~VvVT~G~~~~ 198 (221)
++.|+|.+.. +.+++.+++++|.++ |++.|+||+|+ +|
T Consensus 210 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~-~G 257 (351)
T 2afb_A 210 IEKVLGISVEGLDLKTGKLNREAYAKIAEEVTRKYNFKTVGITLRE-SI 257 (351)
T ss_dssp HHHHHCCCCSCC-------CHHHHHHHHHHHHHHHCCSEEEEEEEE-CS
T ss_pred HHHHhCCCcccccccccccchhhHHHHHHHHHHHcCCCEEEEEeCC-cC
Confidence 9999998754 567788889999875 99999999999 55
No 29
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=99.46 E-value=1.2e-13 Score=118.38 Aligned_cols=157 Identities=16% Similarity=0.168 Sum_probs=108.7
Q ss_pred ccCccchhh---cHHHHHhcCCceeeeeeEEeecCCCCC--------cc--ceeeCCHHHHHHHHHHHHhcCcccccEE-
Q 027620 25 VQGYVGNKS---AVFPLQLLGYDVDPIHSVQFSNHTGYP--------TF--KGQVLNGQQLCDLIEGLEANNLLYYTHL- 90 (221)
Q Consensus 25 ~~G~vG~d~---~~~~l~~~gi~~~~v~~~~~~~~~~~~--------~~--~G~~l~~~~i~~~l~~i~~~~~l~~~~v- 90 (221)
.+|.+|++. .++.|+++||+++++.... .+.+.+. .+ .|..+++++++.+.+.+... .-..+.+
T Consensus 57 ~~~~vG~~~G~~i~~~L~~~gV~~~~v~~~~-~t~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~-~~~~~~v~ 134 (323)
T 2f02_A 57 ATGVLGGFHGAFIANELKKANIPQAFTSIKE-ETRDSIAILHEGNQTEILEAGPTVSPEEISNFLENFDQL-IKQAEIVT 134 (323)
T ss_dssp EEEEEEHHHHHHHHHHHHHTTCCBCCEEESS-CCEEEEEEEETTEEEEEEECCCBCCHHHHHHHHHHHHHH-HTTCSEEE
T ss_pred EEEEeccchHHHHHHHHHHCCCceeEEEcCC-CCeeEEEEEcCCCeEEEECCCCCCCHHHHHHHHHHHHHh-ccCCCEEE
Confidence 477788644 5567999999998775431 1111111 01 25568888887665444211 0023443
Q ss_pred EEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcC---CCceEEecCHHHHHHhcCCC
Q 027620 91 LTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVV---PVASMLTPNQFEAEQLTGFR 167 (221)
Q Consensus 91 ~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll---~~~dvi~pN~~Ea~~l~g~~ 167 (221)
+.|+++...+.+.+.++++.++++ ++++++||+. +. +++ ++ +++|+++||++|++.|+|.+
T Consensus 135 ~~g~~~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~---------~~----~~~-~l~~~~~~dil~~N~~E~~~l~g~~ 198 (323)
T 2f02_A 135 ISGSLAKGLPSDFYQELVQKAHAQ--EVKVLLDTSG---------DS----LRQ-VLQGPWKPYLIKPNLEELEGLLGQD 198 (323)
T ss_dssp EESCCCBTSCTTHHHHHHHHHHHT--TCEEEEECCT---------HH----HHH-HHHSSCCCSEECCBHHHHHHHHTCC
T ss_pred EECCCCCCCChHHHHHHHHHHHHC--CCEEEEECCh---------HH----HHH-HHhccCCCeEEecCHHHHHHHhCCC
Confidence 468887655567888899999988 8999999942 11 222 33 69999999999999999986
Q ss_pred CC-CH-HHHHHHHHHHHHcCCCeEEEeeeeeCCcE
Q 027620 168 IG-SE-ADGREACKILHAAGPAKVVITSINIDGNL 200 (221)
Q Consensus 168 ~~-s~-~~~~~a~~~L~~~G~~~VvVT~G~~~~~~ 200 (221)
.. +. +++.+++++|.++|++.|+||+|+ +|..
T Consensus 199 ~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~-~G~~ 232 (323)
T 2f02_A 199 FSENPLAAVQTALTKPMFAGIEWIVISLGK-DGAI 232 (323)
T ss_dssp CCSSCHHHHHHHHTSGGGTTCSEEEEECGG-GCEE
T ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEEeecC-CceE
Confidence 54 45 678888899999999999999999 6754
No 30
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=99.46 E-value=3.5e-14 Score=122.71 Aligned_cols=161 Identities=15% Similarity=0.099 Sum_probs=107.7
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEEeecCCCCCcc----------ce--eeCCHH-HHH--HHHHHHHhcCcc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYPTF----------KG--QVLNGQ-QLC--DLIEGLEANNLL 85 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~~~~~~~~~~~----------~G--~~l~~~-~i~--~~l~~i~~~~~l 85 (221)
.+|.+|+|. .++.|+++||+++++.....+|...+..+ .| ..++++ +++ ...+.++..+++
T Consensus 86 ~ig~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~T~~~~~~~~~g~r~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~v 165 (345)
T 1bx4_A 86 FFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVC 165 (345)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCEEEEEEESSSCCCEEEEEEETTEEEEEEECGGGGGCCGGGTTTSHHHHHHHHHCSEE
T ss_pred EEEEeCCChhHHHHHHHHHHcCCceeeeecCCCCCceEEEEEcCCceEeeeccchHhhcCcccccCcHHHHHHHhhCCEE
Confidence 567788886 55679999999998753222222211111 11 134445 443 223345544432
Q ss_pred cccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcC
Q 027620 86 YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (221)
Q Consensus 86 ~~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g 165 (221)
++.|+.+ +.+.+.+.++++.++++ ++++++||.. . ++.+...+.+++ +++++|+++||++|++.|+|
T Consensus 166 ----~~~g~~~-~~~~~~~~~~~~~a~~~--g~~v~~d~~~----~-~~~~~~~~~~~~-~l~~~dil~~N~~E~~~l~g 232 (345)
T 1bx4_A 166 ----YIAGFFL-TVSPESVLKVAHHASEN--NRIFTLNLSA----P-FISQFYKESLMK-VMPYVDILFGNETEAATFAR 232 (345)
T ss_dssp ----EEEGGGG-GTCHHHHHHHHHHHHHT--TCEEEEECCS----H-HHHHHTHHHHHH-HGGGCSEEEEEHHHHHHHHH
T ss_pred ----EEEEEec-cCCHHHHHHHHHHHHHc--CCEEEEeCCc----H-HHHHHHHHHHHH-HhccCCEEeCCHHHHHHHhc
Confidence 3456655 34568888999999988 8899999942 1 122333455655 89999999999999999987
Q ss_pred CCCCCHHHHHHHHHHHHH------cCCCeEEEeeeeeCCc
Q 027620 166 FRIGSEADGREACKILHA------AGPAKVVITSINIDGN 199 (221)
Q Consensus 166 ~~~~s~~~~~~a~~~L~~------~G~~~VvVT~G~~~~~ 199 (221)
....+.+++.+++++|.+ +|++.|+||+|+ +|.
T Consensus 233 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~-~G~ 271 (345)
T 1bx4_A 233 EQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGR-DDT 271 (345)
T ss_dssp HTTCCCCCHHHHHHHHHTSCCSCTTSCCEEEEEETT-EEE
T ss_pred ccCCCCCCHHHHHHHHHhcccccccCCCEEEEEeCC-CCe
Confidence 653344678888999988 699999999998 564
No 31
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=99.46 E-value=3.7e-14 Score=123.84 Aligned_cols=163 Identities=19% Similarity=0.147 Sum_probs=111.7
Q ss_pred CccCccchhh----cHHHHHhcCCceeeeeeEEeecCCCCCcc----------ce--eeCCHHHHHH--HHHHHHhcCcc
Q 027620 24 TVQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYPTF----------KG--QVLNGQQLCD--LIEGLEANNLL 85 (221)
Q Consensus 24 ~~~G~vG~d~----~~~~l~~~gi~~~~v~~~~~~~~~~~~~~----------~G--~~l~~~~i~~--~l~~i~~~~~l 85 (221)
..+|.+|+|. .++.|+++||+++++.....+|...+..+ .| ..+++++++. ..+.+...+++
T Consensus 101 ~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~Tg~~~i~~~~~~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~v 180 (365)
T 3loo_A 101 IFFGCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAVLVTGTQRSLCANLAAANDFTPEHLRSDGNRAYLQGAQFF 180 (365)
T ss_dssp EEEEEEESBHHHHHHHHHHHHHTCEEEEEEESSSCCEEEEEEEETTEEEEEEECGGGGGCCGGGGGSHHHHHHHHHCSEE
T ss_pred EEEEEecCCchHHHHHHHHHHCCCceeccccCCCCCeEEEEEEECCceEEEeccchHhhCCHhHcCchhhHHHHhhCCEE
Confidence 3578889885 55679999999998764221111111111 12 2566666542 33456655542
Q ss_pred cccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcC
Q 027620 86 YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (221)
Q Consensus 86 ~~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g 165 (221)
++.|+.+ ..+.+.+.++++.++++ ++++++||.. . ++.+...+.+++ +++++|+++||++|++.|++
T Consensus 181 ----~i~G~~~-~~~~~~~~~~~~~a~~~--g~~v~~d~~~----~-~~~~~~~~~l~~-~l~~~dil~~N~~Ea~~l~g 247 (365)
T 3loo_A 181 ----YVSGFFF-TVSFESALSVAKEAAAT--GRMFMMNLSA----P-FVPQFYKNNLEE-IFPYVDVLFGNETEAIALAK 247 (365)
T ss_dssp ----EEEGGGH-HHHHHHHHHHHHHHHHT--TCEEEEECCS----T-HHHHHCHHHHHH-HGGGCSEEEEEHHHHHHHHH
T ss_pred ----EEeeeec-cCCHHHHHHHHHHHHHc--CCEEEEECCc----h-hhhHHHHHHHHH-HHHhCCEEecCHHHHHHHhc
Confidence 4567765 34567889999999998 8999999831 1 123344556666 88999999999999999998
Q ss_pred CCCCCHHHHHHHHHHHHHc------CCCeEEEeeeeeCCcE
Q 027620 166 FRIGSEADGREACKILHAA------GPAKVVITSINIDGNL 200 (221)
Q Consensus 166 ~~~~s~~~~~~a~~~L~~~------G~~~VvVT~G~~~~~~ 200 (221)
....+.+++++++++|.++ |++.|+||+|+ +|..
T Consensus 248 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~-~Ga~ 287 (365)
T 3loo_A 248 EFNYGTEDLREIGKRIAALPKENGKRKRIVIITQGS-DPVL 287 (365)
T ss_dssp HTTCCCCCHHHHHHHHHTSCCSSTTSCCEEEEEETT-EEEE
T ss_pred ccCCCCCCHHHHHHHHHhhhhhccCCCCEEEEEeCC-CCEE
Confidence 6544456788889998875 89999999998 6643
No 32
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=99.45 E-value=8.3e-14 Score=119.15 Aligned_cols=175 Identities=13% Similarity=0.121 Sum_probs=118.0
Q ss_pred CeeeccCCCCCCe-EEEEec---------------------------------cCccCccchhh---cHHHHHhcCCcee
Q 027620 4 PILSLALPSETGR-VLSIQS---------------------------------HTVQGYVGNKS---AVFPLQLLGYDVD 46 (221)
Q Consensus 4 ~~~~~~~~~~~~~-vl~i~~---------------------------------~~~~G~vG~d~---~~~~l~~~gi~~~ 46 (221)
-|+|+++|+.... ++.+.. ...+|.+|+|. .++.|+++||+++
T Consensus 3 mi~tvt~np~iD~~~~~v~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d~g~~i~~~l~~~gv~~~ 82 (320)
T 3ie7_A 3 LIYTITLNPAIDRLLFIRGELEKRKTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSDNLDKLYAILKEKHINHD 82 (320)
T ss_dssp CEEEEESSCEEEEEEEESSSCCTTSCCCCSEEEEEEESHHHHHHHHHHHHTCCEEEEEEEESTTHHHHHHHHHHTTCCBC
T ss_pred eEEEEecchHHeeeEEEcCCccCCCeeEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCchHHHHHHHHHHcCCceE
Confidence 4899999988888 554321 12478888874 5567999999999
Q ss_pred ee-eeEEeecC-------CCC--Cc---cceeeCCHHHHHHHHHHHHhcCcccccEEE-EeecCChhHHHHHHHHHHHHH
Q 027620 47 PI-HSVQFSNH-------TGY--PT---FKGQVLNGQQLCDLIEGLEANNLLYYTHLL-TGYIGSVSFLNTILQVVEKLR 112 (221)
Q Consensus 47 ~v-~~~~~~~~-------~~~--~~---~~G~~l~~~~i~~~l~~i~~~~~l~~~~v~-~G~l~~~~~~~~i~~~i~~ak 112 (221)
++ .... ++. .+- .. ..|..+++++++.+++.+...- -.++.+. .|+++.+.+.+.+.++++.++
T Consensus 83 ~v~~~~~-~t~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~v~~~g~~~~~~~~~~~~~~~~~a~ 160 (320)
T 3ie7_A 83 FLVEAGT-STRECFVVLSDDTNGSTMIPEAGFTVSQTNKDNLLKQIAKKV-KKEDMVVIAGSPPPHYTLSDFKELLRTVK 160 (320)
T ss_dssp CEEETTC-CCEEEEEEEETTCSCCEEEECCCCCCCHHHHHHHHHHHHHHC-CTTCEEEEESCCCTTCCHHHHHHHHHHHH
T ss_pred EEEecCC-CCceEEEEEECCCceeEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCCEEEEeCCCCCCCCHHHHHHHHHHHH
Confidence 88 3221 111 111 11 1356788888887766553321 1345444 599887677788999999999
Q ss_pred hcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCCCCC-CHHHHHHHHHHHHHcCCCeEEE
Q 027620 113 SINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIG-SEADGREACKILHAAGPAKVVI 191 (221)
Q Consensus 113 ~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~~~~-s~~~~~~a~~~L~~~G~~~VvV 191 (221)
++ ++++++||++. .+.+.+.+++|+++||++|++.|+|.+.. +.+++.+++ +. ++.|+|
T Consensus 161 ~~--g~~v~~D~~~~-------------~l~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~----~~-~~~vvv 220 (320)
T 3ie7_A 161 AT--GAFLGCDNSGE-------------YLNLAVEMGVDFIKPNEDEVIAILDEKTNSLEENIRTLA----EK-IPYLVV 220 (320)
T ss_dssp HH--TCEEEEECCHH-------------HHHHHHHHCCSEECCBTTGGGGGSCTTCCCHHHHHHHHT----TT-CSEEEE
T ss_pred hc--CCEEEEECChH-------------HHHHHHhcCCeEEeeCHHHHHHHhCCCcCCCHHHHHHHH----hh-CCEEEE
Confidence 98 89999999431 22221324999999999999999998754 344444433 33 889999
Q ss_pred eeeeeCCcEE
Q 027620 192 TSINIDGNLF 201 (221)
Q Consensus 192 T~G~~~~~~~ 201 (221)
|+|+ +|..+
T Consensus 221 t~G~-~G~~~ 229 (320)
T 3ie7_A 221 SLGA-KGSIC 229 (320)
T ss_dssp ECGG-GCEEE
T ss_pred EcCC-CceEE
Confidence 9998 77543
No 33
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=99.45 E-value=2.1e-14 Score=124.30 Aligned_cols=163 Identities=13% Similarity=0.197 Sum_probs=111.2
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEEeecCCCCCc----------cce--eeCCHHHHHH--HHHHHHhcCccc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYPT----------FKG--QVLNGQQLCD--LIEGLEANNLLY 86 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~~~~~~~~~~----------~~G--~~l~~~~i~~--~l~~i~~~~~l~ 86 (221)
.+|.+|+|. .++.|+++||+++++.....+|...+.. ..| ..+++++++. ..+.++..+++
T Consensus 88 ~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~T~~~~i~~~~g~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~- 166 (347)
T 3otx_A 88 YVGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGSGACAVCITGKERTLVADLGAANHLSSEHMRSPAVVRAMDESRIF- 166 (347)
T ss_dssp EECEECSSHHHHHHHHHHHHHTCEECCEECSSSCEEEEEEEEETTEEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSEE-
T ss_pred EEEEecCChHHHHHHHHHHHCCCceecccCCCCCCeEEEEEEECCceeeeechhhhhcCCHHHcCchhhHHHHhhCCEE-
Confidence 678889886 5567999999998874322111111111 112 2577777753 23456666542
Q ss_pred ccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCC
Q 027620 87 YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGF 166 (221)
Q Consensus 87 ~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~ 166 (221)
++.|+.+. .+.+.+.++++.++++ ++++++||... ++.+...+.+++ +++++|+++||++|++.|++.
T Consensus 167 ---~~~g~~~~-~~~~~~~~~~~~a~~~--g~~v~~d~~~~-----~~~~~~~~~l~~-~l~~~dil~~N~~Ea~~l~~~ 234 (347)
T 3otx_A 167 ---YFSGFTLT-VDVNHVLQACRKAREV--DGLFMINLSAP-----FIMQFFSAQLGE-VLPYTDIIVANRHEAKEFANM 234 (347)
T ss_dssp ---EEEGGGGG-TCHHHHHHHHHHHHHT--TCEEEEECCCH-----HHHHHCHHHHHH-HGGGCSEEEEEHHHHHHHHHH
T ss_pred ---EEeeeecc-cCHHHHHHHHHHHHHh--CCEEEeeCchh-----hhHHHHHHHHHH-HHhhCCEEecCHHHHHHHhcc
Confidence 45676653 4568889999999998 89999998411 122333456666 899999999999999999875
Q ss_pred CCCCHHHHHHHHHHHH------HcCCCeEEEeeeeeCCcEE
Q 027620 167 RIGSEADGREACKILH------AAGPAKVVITSINIDGNLF 201 (221)
Q Consensus 167 ~~~s~~~~~~a~~~L~------~~G~~~VvVT~G~~~~~~~ 201 (221)
...+.+++++++++|. +.|++.|+||+|+ +|..+
T Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~-~Ga~~ 274 (347)
T 3otx_A 235 MKWDTDCVEEIARRAVSEVPYTGTKGRVVVFTRDI-ESTVL 274 (347)
T ss_dssp HTCCCCCHHHHHHHHHHTSCCCCSSCCEEEEEETT-EEEEE
T ss_pred cCCCcCCHHHHHHHHHhhhccccCCCCEEEEEeCC-CCeEE
Confidence 4333457778888887 4799999999998 66443
No 34
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=99.45 E-value=1e-13 Score=120.68 Aligned_cols=150 Identities=21% Similarity=0.195 Sum_probs=99.3
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEEeecCCCCC--c---------cce-eeCCHHHHH----HHHHHHHhcCc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYP--T---------FKG-QVLNGQQLC----DLIEGLEANNL 84 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~~~~~~~~~--~---------~~G-~~l~~~~i~----~~l~~i~~~~~ 84 (221)
.+|.+|+|. .++.|+++||++..+.... ..|++. . +.. ...+.+... ...+.++..++
T Consensus 112 ~ig~vG~D~~G~~i~~~L~~~GV~~~~~~~~~--~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 189 (352)
T 4e84_A 112 LLCVVGCDEPGERIVELLGSSGVTPHLERDPA--LPTTIKLRVLARQQQLLRVDFEAMPTHEVLLAGLARFDVLLPQHDV 189 (352)
T ss_dssp EEEEEESSHHHHHHHHHHTTTSCEEEEEEETT--SCCCEEEEEEESSCEEEEEEECCCCCHHHHHHHHHHHHHHGGGCSE
T ss_pred EEEEeCCChhHHHHHHHHHHcCCceeeEECCC--CCCceEEEEEcCCceEEEEEcCCCCCHHHHHHHHHHHHHhcccCCE
Confidence 688899886 5567999999984333222 223321 1 110 011222222 22233444443
Q ss_pred ccccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhc
Q 027620 85 LYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (221)
Q Consensus 85 l~~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~ 164 (221)
+++.|+.. .+.+.+.++++.++++ +++|++||++.. + .+++++|+++||++|++.|+
T Consensus 190 ----v~~~g~~~--~~~~~~~~~~~~a~~~--g~~v~~D~~~~~----~-----------~~l~~~dil~pN~~Ea~~l~ 246 (352)
T 4e84_A 190 ----VLMSDYAK--GGLTHVTTMIEKARAA--GKAVLVDPKGDD----W-----------ARYRGASLITPNRAELREVV 246 (352)
T ss_dssp ----EEEECCSS--SSCSSHHHHHHHHHHT--TCEEEEECCSSC----C-----------STTTTCSEECCBHHHHHHHH
T ss_pred ----EEEeCCCC--CCHHHHHHHHHHHHhc--CCEEEEECCCcc----h-----------hhccCCcEEcCCHHHHHHHh
Confidence 23444432 1223467788999988 999999996531 1 37889999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHH-cCCCeEEEeeeeeCCcEE
Q 027620 165 GFRIGSEADGREACKILHA-AGPAKVVITSINIDGNLF 201 (221)
Q Consensus 165 g~~~~s~~~~~~a~~~L~~-~G~~~VvVT~G~~~~~~~ 201 (221)
| ...+.+++.+++++|++ +|++.|+||+|+ +|..+
T Consensus 247 g-~~~~~~~~~~~a~~l~~~~g~~~VvvT~G~-~Ga~~ 282 (352)
T 4e84_A 247 G-QWKSEDDLRARVANLRAELDIDALLLTRSE-EGMTL 282 (352)
T ss_dssp C-CCSSHHHHHHHHHHHHHHHTCSEEEEECGG-GCEEE
T ss_pred C-CCCCHHHHHHHHHHHHHHhCCCEEEEEcCC-CcEEE
Confidence 9 66678889999999985 799999999999 77543
No 35
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=99.41 E-value=1.5e-13 Score=117.64 Aligned_cols=151 Identities=16% Similarity=0.091 Sum_probs=98.2
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEEeecCCCCCcc-----------c-e--eeCCHHHHHHHH--HHHHhcCc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYPTF-----------K-G--QVLNGQQLCDLI--EGLEANNL 84 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~~~~~~~~~~~-----------~-G--~~l~~~~i~~~l--~~i~~~~~ 84 (221)
.+|.+|+|. .++.|+++||+++++.....+|...+..+ + + ..++++.++... +.+...++
T Consensus 58 ~i~~vG~D~~G~~l~~~L~~~gV~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (317)
T 2nwh_A 58 IIAPRGGDVTGEVVAEAARQAGVEDTPFTFLDRRTPSYTAILERDGNLVIALADMDLYKLFTPRRLKVRAVREAIIASDF 137 (317)
T ss_dssp EECEEESSHHHHHHHHHHHHTTCEECCEEETTSCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHTSHHHHHHHHHCSE
T ss_pred EEEeecCCchHHHHHHHHHHcCCCCCCcccCCCCCceEEEEEcCCCCEEEEEcchHHHhhCCHHHhhhhhhhhHhccCCE
Confidence 588999887 45679999999987322121122111111 1 1 246666555433 44554443
Q ss_pred ccccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhc
Q 027620 85 LYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (221)
Q Consensus 85 l~~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~ 164 (221)
+.++. ..+.+.+.++++.++++ ++++++||+.. ...+.++ .+++++|+++||++|++.|+
T Consensus 138 -----v~~~~---~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~---------~~~~~~~-~ll~~~dil~~N~~E~~~l~ 197 (317)
T 2nwh_A 138 -----LLCDA---NLPEDTLTALGLIARAC--EKPLAAIAISP---------AKAVKLK-AALGDIDILFMNEAEARALT 197 (317)
T ss_dssp -----EEEET---TSCHHHHHHHHHHHHHT--TCCEEEECCSH---------HHHGGGT-TTGGGCSEEEEEHHHHHHHH
T ss_pred -----EEEeC---CCCHHHHHHHHHHHHhc--CCeEEEeCCCH---------HHHHHHH-HHhhhCeEecCCHHHHHHHh
Confidence 33331 22357788889999988 89999999531 0112233 38899999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCc
Q 027620 165 GFRIGSEADGREACKILHAAGPAKVVITSINIDGN 199 (221)
Q Consensus 165 g~~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~ 199 (221)
|. +.+++.++++.|.++|++.|+||+|+ +|.
T Consensus 198 g~---~~~~~~~~~~~l~~~g~~~vvvt~G~-~G~ 228 (317)
T 2nwh_A 198 GE---TAENVRDWPNILRKAGLSGGVVTRGA-SEV 228 (317)
T ss_dssp C--------CTTHHHHHHHTTCCCEEEEETT-TEE
T ss_pred CC---ChhHHHHHHHHHHHcCCCEEEEEECC-CcE
Confidence 86 23456678888999999999999998 664
No 36
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=99.39 E-value=7.6e-14 Score=119.90 Aligned_cols=158 Identities=16% Similarity=0.197 Sum_probs=103.8
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEEeecCCCCC---------c---cce--eeCCHHHHHHHHHHHHhcCccc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYP---------T---FKG--QVLNGQQLCDLIEGLEANNLLY 86 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~~~~~~~~~---------~---~~G--~~l~~~~i~~~l~~i~~~~~l~ 86 (221)
.+|.+|+|. .++.|+++||+++++.... ...+++. . ..| ..++++++.. +.++..+++
T Consensus 73 ~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~-~~~t~~~~v~~~~g~~~~~~~~~a~~~~~~~~~~~--~~~~~~~~v- 148 (327)
T 3hj6_A 73 LISRLGADAFGNYLLDVLKGEQIITDGIQQDK-ERRTTIVYVSKSTRTPDWLPYREADMYLQEDDIIF--ELIKRSKVF- 148 (327)
T ss_dssp EECEEESSHHHHHHHHHHHHTTCBCTTCEEES-SSCCCEEEECCCTTCCCEEEECSGGGGCCSCCCHH--HHHC--CEE-
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCcccEEEcC-CCCceEEEEEecCCCccEEEecChhhhCChhhcCH--hHhccCCEE-
Confidence 588899886 5567999999999886442 1222211 0 111 1233222222 234444332
Q ss_pred ccEEEEee-cCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCC-chhHHHHHHHhcCCCceEEecCHHHHHHhc
Q 027620 87 YTHLLTGY-IGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYV-PSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (221)
Q Consensus 87 ~~~v~~G~-l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~-~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~ 164 (221)
.+.|+ ++.+.+.+.+.++++.++++ ++++++||+++.. +|. .++..+.+++ +++++|+++||++|++.|+
T Consensus 149 ---~~~g~~l~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~--~~~~~~~~~~~~~~-~l~~~dil~~N~~E~~~l~ 220 (327)
T 3hj6_A 149 ---HLSTFILSRKPARDTAIKAFNYAREQ--GKIVCFDPCYRKV--LWPEGDDGAGVVEE-IISRADFVKPSLDDARHLF 220 (327)
T ss_dssp ---EEESHHHHSHHHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GSCSSSCSHHHHHH-HHTTCSEECCBHHHHHHHH
T ss_pred ---EECchHhcCchhHHHHHHHHHHHHHC--CCEEEEECCCchh--hcCCHHHHHHHHHH-HHhhCCEEecCHHHHHHHh
Confidence 23342 33455678889999999998 9999999986532 121 1233455555 8999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCcE
Q 027620 165 GFRIGSEADGREACKILHAAGPAKVVITSINIDGNL 200 (221)
Q Consensus 165 g~~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~ 200 (221)
|.. +.+++++.|.++|++.|+||+|+ +|..
T Consensus 221 g~~-----~~~~~~~~l~~~g~~~vvvt~G~-~G~~ 250 (327)
T 3hj6_A 221 GPD-----SPENYVKRYLELGVKAVILTLGE-EGVI 250 (327)
T ss_dssp TTS-----CSSGGGGGGTTTTCSEEEEECST-TCEE
T ss_pred CCC-----CHHHHHHHHHhCCCCEEEEEECC-CceE
Confidence 872 34456777888999999999998 7754
No 37
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.39 E-value=3.4e-13 Score=113.94 Aligned_cols=157 Identities=17% Similarity=0.148 Sum_probs=102.7
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEE-eecCC--------C---CCccce---eeCCHHHHHHHHHHHHhcCcc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ-FSNHT--------G---YPTFKG---QVLNGQQLCDLIEGLEANNLL 85 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~-~~~~~--------~---~~~~~G---~~l~~~~i~~~l~~i~~~~~l 85 (221)
.+|.+|+|. .++.|+++|| +++.... .+|.. + +....+ ..++..+ ...+.++.
T Consensus 43 ~~~~vG~D~~g~~~~~~l~~~gv--~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~~~~~~~l~~~~--~~~~~~~~---- 114 (296)
T 2qhp_A 43 VVSAVGNDELGDEIMEVFKEKQL--KNQIERVDYPTGTVQVTLDDEGVPCYEIKEGVAWDNIPFTD--ELKRLALN---- 114 (296)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTC--CEEEEEESSCCEEEEEC------CCEEECSSCGGGCCCCCH--HHHHHHHT----
T ss_pred EEEEeCCChHHHHHHHHHHHcCC--CEEeecCCCCceEEEEEECCCCCEEEEEecCChhhhCCcch--hhHhhhcC----
Confidence 578899886 5567999999 5554432 11111 1 110111 1232111 12233443
Q ss_pred cccEEEEeecC--ChhHHHHHHHHHHHHHh-cCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHH
Q 027620 86 YYTHLLTGYIG--SVSFLNTILQVVEKLRS-INPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQ 162 (221)
Q Consensus 86 ~~~~v~~G~l~--~~~~~~~i~~~i~~ak~-~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~ 162 (221)
++.+.+|+++ .+.+.+.+.++++.+++ + +.++++||+++.. ++.. +.+++ +++++|+++||++|++.
T Consensus 115 -~~~v~~g~~~~~~~~~~~~~~~~~~~a~~~~--~~~v~~D~~~~~~---~~~~---~~~~~-~l~~~dil~~N~~E~~~ 184 (296)
T 2qhp_A 115 -TRAVCFGSLAQRNEVSRATINRFLDTMPDID--GQLKIFDINLRQD---FYTK---EVLRE-SFKRCNILKINDEELVT 184 (296)
T ss_dssp -EEEEEECSGGGSSHHHHHHHHHHHHHSCCTT--SCEEEEECCCCTT---CCCH---HHHHH-HHHHCSEEEEEHHHHHH
T ss_pred -CCEEEECChHhcChHHHHHHHHHHHHHHhcC--CCEEEEECcCCcc---ccCH---HHHHH-HHHHCCEEECCHHHHHH
Confidence 3456677764 35567888888888876 5 7899999987643 1232 34444 78899999999999999
Q ss_pred hcCCCCCCHHHHHHHHHHHHHc-CCCeEEEeeeeeCCcE
Q 027620 163 LTGFRIGSEADGREACKILHAA-GPAKVVITSINIDGNL 200 (221)
Q Consensus 163 l~g~~~~s~~~~~~a~~~L~~~-G~~~VvVT~G~~~~~~ 200 (221)
|+|....+.+++++++++|.++ |++.|+||+|+ +|..
T Consensus 185 l~g~~~~~~~~~~~~~~~l~~~~g~~~vvvt~G~-~G~~ 222 (296)
T 2qhp_A 185 ISRMFGYPGIDLQDKCWILLAKYNLKMLILTCGI-NGSY 222 (296)
T ss_dssp HHHHTTCTTSCHHHHHHHHHHHTTCSEEEEECGG-GCEE
T ss_pred HhcccCCCCCCHHHHHHHHHHhcCCCEEEEeecC-CCeE
Confidence 9986544445677888888875 99999999998 6754
No 38
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=99.37 E-value=1.1e-12 Score=112.05 Aligned_cols=156 Identities=15% Similarity=0.107 Sum_probs=104.1
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEEeecCCC--CCc-----------cc-----eeeCCHHHHHHHHHHHHhc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTG--YPT-----------FK-----GQVLNGQQLCDLIEGLEAN 82 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~~~~~~~--~~~-----------~~-----G~~l~~~~i~~~l~~i~~~ 82 (221)
.+|.+|+|. .++.|+++||+++++..... ..|+ +.. +. ...+++++++. +.++..
T Consensus 60 ~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~-~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~ 136 (319)
T 3pl2_A 60 LLSRVGNDPFGEYLLAELERLGVDNQYVATDQT-FKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVSL--DDVREA 136 (319)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTEECTTEEEESS-SCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSCH--HHHHHC
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCccccEEecCC-CCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCCH--HHhccC
Confidence 578899886 55679999999998865421 1222 110 10 12455555542 345655
Q ss_pred CcccccEEEEeecCCh-hHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCc-hhHHHHHHHhcCCCceEEecCHHHH
Q 027620 83 NLLYYTHLLTGYIGSV-SFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVP-SELVSVYREKVVPVASMLTPNQFEA 160 (221)
Q Consensus 83 ~~l~~~~v~~G~l~~~-~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~-~~~~~~l~~~ll~~~dvi~pN~~Ea 160 (221)
+++ ++.|+.+.. ...+.+.++++.+++ +.++++||+.+.. +|.+ ....+.+++ +++++|+++||++|+
T Consensus 137 ~~~----~~~g~~~~~~~~~~~~~~~~~~~~~---~~~v~~D~~~~~~--~~~~~~~~~~~~~~-~l~~~dil~~N~~E~ 206 (319)
T 3pl2_A 137 DIL----WFTLTGFSEEPSRGTHREILTTRAN---RRHTIFDLDYRPM--FWESPEEATKQAEW-ALQHSTVAVGNKEEC 206 (319)
T ss_dssp SEE----EEEGGGGSSTTHHHHHHHHHHHHTT---CSCEEEECCCCGG--GSSCHHHHHHHHHH-HHTTCSEEEECHHHH
T ss_pred CEE----EEecccccCchhHHHHHHHHHHHHH---CCcEEEeCCCChh--hcCCHHHHHHHHHH-HHHhCCEEEcCHHHH
Confidence 543 355654433 334566667776654 5578999987643 2322 334555665 899999999999999
Q ss_pred HHhcCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCc
Q 027620 161 EQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGN 199 (221)
Q Consensus 161 ~~l~g~~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~ 199 (221)
+.|+|.+ +..++++.|+++|++.|+||+|+ +|.
T Consensus 207 ~~l~g~~-----~~~~~~~~l~~~g~~~vvvt~G~-~G~ 239 (319)
T 3pl2_A 207 EIAVGET-----EPERAGRALLERGVELAIVKQGP-KGV 239 (319)
T ss_dssp HHHHSCC-----SHHHHHHHHHHTTCSEEEEEEET-TEE
T ss_pred HHHcCCC-----CHHHHHHHHHhcCCCEEEEEECC-CCe
Confidence 9999973 56788889999999999999998 664
No 39
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=99.37 E-value=4.7e-14 Score=121.99 Aligned_cols=155 Identities=17% Similarity=0.175 Sum_probs=103.3
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEEeecCCCC--Ccc--cee-------------eCCHHHHHHHHHHHHhcC
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGY--PTF--KGQ-------------VLNGQQLCDLIEGLEANN 83 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~~~~~~~~--~~~--~G~-------------~l~~~~i~~~l~~i~~~~ 83 (221)
.+|.+|+|. +++.|+++||+++++.... ...|+. ..+ .|+ .++++ ..+.++
T Consensus 69 ~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~-~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~----~~~~l~--- 140 (339)
T 1tyy_A 69 FIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDA-DLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQ----DLPPFR--- 140 (339)
T ss_dssp EEEEECSSHHHHHHHHHHHTTTEECTTEEECT-TSCCCEEEEC-------CEEECCSSCGGGGCCGG----GCCCCC---
T ss_pred EEEeeCCCHHHHHHHHHHHHcCCCchheEecC-CCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcc----hhhHhc---
Confidence 578899886 5567999999998876532 122221 111 121 11111 011122
Q ss_pred cccccEEEE-ee-cCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCC-chhHHHHHHHhcCCCceEEecCHHHH
Q 027620 84 LLYYTHLLT-GY-IGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYV-PSELVSVYREKVVPVASMLTPNQFEA 160 (221)
Q Consensus 84 ~l~~~~v~~-G~-l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~-~~~~~~~l~~~ll~~~dvi~pN~~Ea 160 (221)
..+.+.+ |+ ++++.+.+.+.++++.++++ ++++++||+++.. +|. .+...+.+++ +++++|+++||++|+
T Consensus 141 --~~~~v~~~~~~l~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~--~~~~~~~~~~~~~~-ll~~~dil~~N~~Ea 213 (339)
T 1tyy_A 141 --QYEWFYFSSIGLTDRPAREACLEGARRMREA--GGYVLFDVNLRSK--MWGNTDEIPELIAR-SAALASICKVSADEL 213 (339)
T ss_dssp --TTCEEEEEHHHHSSHHHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GCSCGGGHHHHHHH-HHHHCSEEEEEHHHH
T ss_pred --cCCEEEEcchhhcCcccHHHHHHHHHHHHHc--CCEEEEeCCCCcc--ccCCHHHHHHHHHH-HHhhCCEEecCHHHH
Confidence 2444444 43 34566778889999999988 8999999987642 222 2344556665 889999999999999
Q ss_pred HHhcCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCcE
Q 027620 161 EQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNL 200 (221)
Q Consensus 161 ~~l~g~~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~ 200 (221)
+.|+|.+ ++++++++|.++|++.|+||+|+ +|..
T Consensus 214 ~~l~g~~-----~~~~~~~~l~~~g~~~VvvT~G~-~G~~ 247 (339)
T 1tyy_A 214 CQLSGAS-----HWQDARYYLRDLGCDTTIISLGA-DGAL 247 (339)
T ss_dssp HHHHCCS-----SGGGGSSTTGGGTCSCEEEECGG-GCEE
T ss_pred HHHhCCC-----CHHHHHHHHHHcCCCEEEEEECC-CceE
Confidence 9999973 44566777888999999999998 6753
No 40
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=99.37 E-value=4e-13 Score=114.32 Aligned_cols=154 Identities=21% Similarity=0.185 Sum_probs=101.9
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEEeecCCCCCcc--ce-------------eeCCHHHHHHHHHHHHhcCcc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYPTF--KG-------------QVLNGQQLCDLIEGLEANNLL 85 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~~~~~~~~~~~--~G-------------~~l~~~~i~~~l~~i~~~~~l 85 (221)
.+|.+|+|. .++.|+++||+++++......+...+... .| ..++++++.. +.++.
T Consensus 52 ~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~--~~~~~---- 125 (309)
T 1v1a_A 52 FVGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDP--DYLEG---- 125 (309)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTCBCTTEEECSSCCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCG--GGGTT----
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCCceEEEcCCCCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCCh--hHhcC----
Confidence 578899886 55679999999988764321121111110 11 2344333322 12333
Q ss_pred cccEE-EEeecC--ChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHH
Q 027620 86 YYTHL-LTGYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQ 162 (221)
Q Consensus 86 ~~~~v-~~G~l~--~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~ 162 (221)
.+.+ +.|+.+ ++.+.+.+.++++.++++ ++++++||+++.. +|..++..+.+++ +++++|+++||++|++.
T Consensus 126 -~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~--~~~~~~~~~~~~~-~l~~~dil~~N~~E~~~ 199 (309)
T 1v1a_A 126 -VRFLHLSGITPALSPEARAFSLWAMEEAKRR--GVRVSLDVNYRQT--LWSPEEARGFLER-ALPGVDLLFLSEEEAEL 199 (309)
T ss_dssp -CSEEEEETTGGGSCHHHHHHHHHHHHHHHTT--TCEEEEECCCCTT--TSCHHHHHHHHHH-HGGGCSEEEEEHHHHHH
T ss_pred -CCEEEEeCchhccCchHHHHHHHHHHHHHHc--CCEEEEeCCCCcc--cCCHHHHHHHHHH-HHHhCCEEECcHHHHHH
Confidence 3333 556655 356678889999999988 8999999987643 2322344456665 89999999999999999
Q ss_pred hcCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCcEE
Q 027620 163 LTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLF 201 (221)
Q Consensus 163 l~g~~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~~ 201 (221)
|+|.+ +++++ ++|++.|+||+|+ +|..+
T Consensus 200 l~g~~-------~~~~~---~~g~~~vvvt~G~-~G~~~ 227 (309)
T 1v1a_A 200 LFGRV-------EEALR---ALSAPEVVLKRGA-KGAWA 227 (309)
T ss_dssp HHSSH-------HHHHH---HTCCSEEEEECGG-GCEEE
T ss_pred HhCCH-------HHHHH---hcCCCEEEEEecC-CCeeE
Confidence 99862 33444 7799999999999 77543
No 41
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=99.37 E-value=6e-13 Score=114.19 Aligned_cols=156 Identities=17% Similarity=0.209 Sum_probs=102.3
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEE-eecCCCCCcc--cee------------eCCHHHHHHHHHHHHhcCcc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ-FSNHTGYPTF--KGQ------------VLNGQQLCDLIEGLEANNLL 85 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~-~~~~~~~~~~--~G~------------~l~~~~i~~~l~~i~~~~~l 85 (221)
.+|.+|+|. .++.|+++||+++++.... .+|...+..+ .|+ .++.++++ .+.+...++
T Consensus 62 ~ig~vG~D~~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~- 138 (325)
T 3h49_A 62 LMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVD--FARFSQAKL- 138 (325)
T ss_dssp EECEEESSHHHHHHHHHHHHHTCBCSSCEEETTSCCCEEEEEECTTSCEEEECCTTSHHHHCCGGGCC--GGGGGGCSE-
T ss_pred EEEEECCChHHHHHHHHHHHcCCceeeEEecCCCCCceEEEEECCCCceeEEeccCcccccCChhhcC--hhhhccCCE-
Confidence 688999986 5567999999999886542 1222111111 121 12222222 112333333
Q ss_pred cccEEEEeecCChh-HHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhc
Q 027620 86 YYTHLLTGYIGSVS-FLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (221)
Q Consensus 86 ~~~~v~~G~l~~~~-~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~ 164 (221)
..+.|+++.+. ..+.+.++++.++++ + .+++||++++. ++ +..+.+++ +++++|+++||++|++.|+
T Consensus 139 ---~~~~g~~~~~~~~~~~~~~~~~~a~~~--~-~~~~d~~~~~~---~~--~~~~~~~~-~l~~~dil~~N~~E~~~l~ 206 (325)
T 3h49_A 139 ---LSLASIFNSPLLDGKALTEIFTQAKAR--Q-MIICADMIKPR---LN--ETLDDICE-ALSYVDYLFPNFAEAKLLT 206 (325)
T ss_dssp ---EEEEEETTSTTSCHHHHHHHHHHHHHT--T-CEEEEEECCCS---SC--CCHHHHHH-HHTTCSEEECBHHHHHHHH
T ss_pred ---EEEecccCCcccCHHHHHHHHHHHHhc--C-CEEEecCCchh---hh--hHHHHHHH-HHhhCCEEecCHHHHHHHh
Confidence 23556654332 357788899999987 7 68888876543 11 12344555 8899999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCcEE
Q 027620 165 GFRIGSEADGREACKILHAAGPAKVVITSINIDGNLF 201 (221)
Q Consensus 165 g~~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~~ 201 (221)
|.+ +.+++++.|.++|++.|+||+|+ +|..+
T Consensus 207 g~~-----~~~~~~~~l~~~g~~~vvvt~G~-~G~~~ 237 (325)
T 3h49_A 207 GKE-----TLDEIADCFLACGVKTVVIKTGK-DGCFI 237 (325)
T ss_dssp TCS-----SHHHHHHHHHTTTCSEEEEECTT-SCEEE
T ss_pred CCC-----CHHHHHHHHHHcCCCEEEEEeCC-CCeEE
Confidence 973 56677888999999999999998 77543
No 42
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=99.36 E-value=2.3e-13 Score=118.37 Aligned_cols=156 Identities=13% Similarity=0.119 Sum_probs=106.7
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEE-eecC--------CC---CCccce--eeCCHHHHHHHHHHHHhcCccc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ-FSNH--------TG---YPTFKG--QVLNGQQLCDLIEGLEANNLLY 86 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~-~~~~--------~~---~~~~~G--~~l~~~~i~~~l~~i~~~~~l~ 86 (221)
.+|.+|+|. .++.|+++||+++.+.... .+|. .+ +....| ..+++++++. +.++..++
T Consensus 99 ~ig~vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~~ga~~~l~~~~~~~--~~~~~~~~-- 174 (352)
T 4e3a_A 99 YFGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEA--DVVADAKV-- 174 (352)
T ss_dssp EECCCCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEECGGGGGCCGGGCCH--HHHHTEEE--
T ss_pred EEEEECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEeccChhhcCChhhCCH--HHHhhCCE--
Confidence 688999886 5567999999998876432 1111 11 111112 3555555543 24554443
Q ss_pred ccEEEEeecC-ChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCC--CceEEecCHHHHHHh
Q 027620 87 YTHLLTGYIG-SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP--VASMLTPNQFEAEQL 163 (221)
Q Consensus 87 ~~~v~~G~l~-~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~--~~dvi~pN~~Ea~~l 163 (221)
.++.|+++ ++.+.+.+.++++.++++ ++++++||+.. ++.+...+.+++ +++ ++|+++||++|++.|
T Consensus 175 --v~~~G~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~-----~~~~~~~~~l~~-ll~~~~~dil~~N~~Ea~~l 244 (352)
T 4e3a_A 175 --TYFEGYLWDPPRAKEAILDCARIAHQH--GREMSMTLSDS-----FCVDRYRGEFLD-LMRSGKVDIVFANRQEALSL 244 (352)
T ss_dssp --EEEEGGGGSSSSHHHHHHHHHHHHHHT--TCEEEEECCCH-----HHHHHHHHHHHH-HHHTTSCCEEEEEHHHHHHH
T ss_pred --EEEeeeecCCchHHHHHHHHHHHHHHc--CCEEEEECCch-----hhHHHHHHHHHH-HhcccCCcEEEeCHHHHHHH
Confidence 24668764 345678899999999998 99999999421 122344566666 888 899999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCcEE
Q 027620 164 TGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLF 201 (221)
Q Consensus 164 ~g~~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~~ 201 (221)
+|.+ +.+++++.|.+ |++.|+||+|+ +|..+
T Consensus 245 ~g~~-----~~~~a~~~l~~-~~~~vvvT~G~-~G~~~ 275 (352)
T 4e3a_A 245 YQTD-----DFEEALNRIAA-DCKIAAVTMSE-NGAVI 275 (352)
T ss_dssp TTCS-----CHHHHHHHHHH-HSSEEEEECGG-GCEEE
T ss_pred hCCC-----CHHHHHHHHhc-CCCEEEEEECC-CceEE
Confidence 9873 56667777665 68999999998 77543
No 43
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.35 E-value=8.9e-13 Score=113.45 Aligned_cols=156 Identities=10% Similarity=0.119 Sum_probs=107.7
Q ss_pred ccCccchhh---cHHHHHhcC--CceeeeeeEEeecC--------CCC--Ccc--ceeeCCHHHHHHHHHHHHhcCcccc
Q 027620 25 VQGYVGNKS---AVFPLQLLG--YDVDPIHSVQFSNH--------TGY--PTF--KGQVLNGQQLCDLIEGLEANNLLYY 87 (221)
Q Consensus 25 ~~G~vG~d~---~~~~l~~~g--i~~~~v~~~~~~~~--------~~~--~~~--~G~~l~~~~i~~~l~~i~~~~~l~~ 87 (221)
.+|.+|+|. .++.|+++| |+++++.... .+. .+- ..+ .|..+++++++.+++.+... .-..
T Consensus 70 ~~~~vG~d~G~~i~~~L~~~g~~V~~~~v~~~~-~t~~~~~~v~~~g~~~~~~~~~g~~l~~~~~~~~~~~~~~~-~~~~ 147 (331)
T 2ajr_A 70 ATGFVGGYMGKILVEELRKISKLITTNFVYVEG-ETRENIEIIDEKNKTITAINFPGPDVTDMDVNHFLRRYKMT-LSKV 147 (331)
T ss_dssp EEEEEEHHHHHHHHHHHHHHCTTEEEEEEEESS-CCEEEEEEEETTTTEEEEEECCCCCCCHHHHHHHHHHHHHH-HTTC
T ss_pred EEEEecCchHHHHHHHHHHcCCccceEEEEcCC-CCeEEEEEEeCCCceEEEEeCCCCCCCHHHHHHHHHHHHHh-cccC
Confidence 477888765 556799999 9998875431 111 111 111 24568888877654433210 0013
Q ss_pred cE-EEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcC---CCceEEecCHHH-HHH
Q 027620 88 TH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVV---PVASMLTPNQFE-AEQ 162 (221)
Q Consensus 88 ~~-v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll---~~~dvi~pN~~E-a~~ 162 (221)
+. ++.|++|.+.+.+.+.++++.++++ ++++++||+. +. +++ ++ +++|+++||++| ++.
T Consensus 148 ~~v~~~g~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~---------~~----~~~-~l~~~~~~dil~~N~~E~~~~ 211 (331)
T 2ajr_A 148 DCVVISGSIPPGVNEGICNELVRLARER--GVFVFVEQTP---------RL----LER-IYEGPEFPNVVKPDLRGNHAS 211 (331)
T ss_dssp SEEEEESCCCTTSCTTHHHHHHHHHHHT--TCEEEEECCH---------HH----HHH-HHHSSCCCSEECCCCTTCCSC
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHc--CCEEEEECCh---------HH----HHH-HHhcCCCCeEEEeCccchHHH
Confidence 33 3557887655567888899999988 9999999952 11 222 33 359999999999 999
Q ss_pred hcCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCcE
Q 027620 163 LTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNL 200 (221)
Q Consensus 163 l~g~~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~ 200 (221)
|+|.+..+.+++.+++++|+++ ++.|+||+|+ +|..
T Consensus 212 l~g~~~~~~~~~~~~~~~l~~~-~~~vvvT~G~-~Ga~ 247 (331)
T 2ajr_A 212 FLGVDLKTFDDYVKLAEKLAEK-SQVSVVSYEV-KNDI 247 (331)
T ss_dssp BTTBCCCSHHHHHHHHHHHHHH-SSEEEEEETT-TEEE
T ss_pred HhCCCCCCHHHHHHHHHHHHHh-cCEEEEeecC-CceE
Confidence 9998777778888999999988 9999999998 6653
No 44
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=99.33 E-value=4e-13 Score=117.92 Aligned_cols=162 Identities=13% Similarity=0.040 Sum_probs=104.4
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEEeecCCCCCcc----------ce--eeCCHHHHHHHHHHHHhcCccccc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYPTF----------KG--QVLNGQQLCDLIEGLEANNLLYYT 88 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~~~~~~~~~~~----------~G--~~l~~~~i~~~l~~i~~~~~l~~~ 88 (221)
.+|.+|+|. .++.|+++||+++++.....+|...+..+ .| ..++++ +...+.++..++
T Consensus 110 ~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~T~~~~~~~~~g~r~~~~~~~a~~~l~~~--~~~~~~l~~~~~---- 183 (383)
T 2abs_A 110 YMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINEKERTLCTHLGACGSFRLP--EDWTTFASGALI---- 183 (383)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEETTEEEEEEECGGGGGCCCC--TTHHHHTTTCCE----
T ss_pred EEEEecCChhHHHHHHHHHHcCCceeeeecCCCCCeEEEEEEcCCceeEeeccChhhhCChh--hhhHHHhhcCCE----
Confidence 477888886 55679999999988753211111111111 11 123332 112223443333
Q ss_pred EEEEeecCChhHHHHHHHHHHHHHh-cCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCCC
Q 027620 89 HLLTGYIGSVSFLNTILQVVEKLRS-INPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFR 167 (221)
Q Consensus 89 ~v~~G~l~~~~~~~~i~~~i~~ak~-~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~~ 167 (221)
+++.|+.+ ..+.+.+.++++.+++ + ++++++||.. . ++.+...+.+++ +++++|+++||++|++.|+|..
T Consensus 184 v~~~g~~~-~~~~~~~~~~~~~a~~~~--g~~v~~d~~~----~-~~~~~~~~~l~~-ll~~~dil~pN~~Ea~~L~g~~ 254 (383)
T 2abs_A 184 FYATAYTL-TATPKNALEVAGYAHGIP--NAIFTLNLSA----P-FCVELYKDAMQS-LLLHTNILFGNEEEFAHLAKVH 254 (383)
T ss_dssp EEEEGGGG-TTCHHHHHHHHHHHHTST--TCEEEEECCC----H-HHHHHCHHHHHH-HHHTCSEEEEEHHHHHHHHHHH
T ss_pred EEEeeecc-cCCHHHHHHHHHHHHHhc--CCEEEEeCCc----H-HHHHHHHHHHHH-HHhhCCEEeCCHHHHHHHhccc
Confidence 23456654 3456888899999998 7 8899999842 1 122334455655 8899999999999999998753
Q ss_pred -CCC-----------HHHHHHHHHHHHH------c-CCCeEEEeeeeeCCcEEE
Q 027620 168 -IGS-----------EADGREACKILHA------A-GPAKVVITSINIDGNLFL 202 (221)
Q Consensus 168 -~~s-----------~~~~~~a~~~L~~------~-G~~~VvVT~G~~~~~~~~ 202 (221)
..+ .+++++++++|.+ + |++.|+||+|+ +|..+.
T Consensus 255 ~~~~~~~~~~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~-~Ga~~~ 307 (383)
T 2abs_A 255 NLVAAEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGH-NPVIAA 307 (383)
T ss_dssp TCC----------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTT-SCEEEE
T ss_pred CcccccccccccccccccHHHHHHHHHhccccccccCCCEEEEEcCC-CCeEEE
Confidence 221 5678888888887 3 99999999999 786443
No 45
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=99.29 E-value=1.3e-12 Score=111.24 Aligned_cols=156 Identities=14% Similarity=0.125 Sum_probs=101.6
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEE-eecCCCCCc--c--ce-------------eeCCHHHHHHHHHHHHhc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ-FSNHTGYPT--F--KG-------------QVLNGQQLCDLIEGLEAN 82 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~-~~~~~~~~~--~--~G-------------~~l~~~~i~~~l~~i~~~ 82 (221)
.+|.+|+|. .++.|+++||+++++.... .++...+.. . .| ..++++++.. +.++..
T Consensus 52 ~i~~vG~D~~g~~~~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~--~~~~~~ 129 (313)
T 2v78_A 52 LIARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINE--NYVRNS 129 (313)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCH--HHHHTS
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCcCceEEEcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCH--HHhcCC
Confidence 578899886 5567999999999876542 112111111 1 11 2455555433 234544
Q ss_pred CcccccEEEEeecC--ChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCC-chhHHHHHHHhcCCCce--EEecCH
Q 027620 83 NLLYYTHLLTGYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYV-PSELVSVYREKVVPVAS--MLTPNQ 157 (221)
Q Consensus 83 ~~l~~~~v~~G~l~--~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~-~~~~~~~l~~~ll~~~d--vi~pN~ 157 (221)
+++ .+.|+.+ ++.+.+.+.++++.+++ . ++||+++.. +|. .++..+.+++ +++++| +++||+
T Consensus 130 ~~v----~~~g~~~~~~~~~~~~~~~~~~~a~~-----~-~~D~~~~~~--~~~~~~~~~~~~~~-~l~~~d~~il~~N~ 196 (313)
T 2v78_A 130 RLV----HSTGITLAISDNAKEAVIKAFELAKS-----R-SLDTNIRPK--LWSSLEKAKETILS-ILKKYDIEVLITDP 196 (313)
T ss_dssp SEE----EEEHHHHHHCHHHHHHHHHHHHHCSS-----E-EEECCCCGG--GSSCHHHHHHHHHH-HHHHSCEEEEEECH
T ss_pred CEE----EEcCchhhcChHHHHHHHHHHHHHHH-----h-CcCCcCChh--hcCCHHHHHHHHHH-HHHhcCeeEEECcH
Confidence 432 3456654 34556777777776643 2 899987632 222 2333455555 889999 999999
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCcEE
Q 027620 158 FEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLF 201 (221)
Q Consensus 158 ~Ea~~l~g~~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~~ 201 (221)
+|++.|+|. ++.++++++|.++|++.|+||+|+ +|..+
T Consensus 197 ~E~~~l~g~-----~~~~~~~~~l~~~g~~~vvvt~G~-~G~~~ 234 (313)
T 2v78_A 197 DDTKILLDV-----TDPDEAYRKYKELGVKVLLYKLGS-KGAIA 234 (313)
T ss_dssp HHHHHHHSC-----CCHHHHHHHHHHTTEEEEEEECGG-GCEEE
T ss_pred HHHHHHhCC-----CCHHHHHHHHHhCCCCEEEEEECC-CCcEE
Confidence 999999986 356778888999999999999998 67543
No 46
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=99.27 E-value=4.5e-12 Score=110.89 Aligned_cols=162 Identities=13% Similarity=0.116 Sum_probs=110.1
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEEeecCCC------------CCccce--eeCCHHHHHH--HHHHHHhcCc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTG------------YPTFKG--QVLNGQQLCD--LIEGLEANNL 84 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~~~~~~~------------~~~~~G--~~l~~~~i~~--~l~~i~~~~~ 84 (221)
.+|+||+|. .++.|++.||+++++..... .+|+ +....| ..+++++++. ..+.++..++
T Consensus 105 fiG~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~-~~T~~~~v~~~dgert~~~~~ga~~~l~~~~i~~~~~~~~i~~a~~ 183 (372)
T 3uq6_A 105 YVGCIGADIQGKYIKNDCSALDLVTEFQIAEEP-LMTGKVAVLVSEKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQV 183 (372)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCEECCEECCTT-CCEEEEEEEECSSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSE
T ss_pred EEeeecCCHHHHHHHHHHHHcCCCceeeeecCC-CCceEEEEEcCCCceEEEEeccchhhcchhhhhhhhHHHHhhcccE
Confidence 467889887 55679999999987754321 1111 111112 3567777743 3345665554
Q ss_pred ccccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhc
Q 027620 85 LYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (221)
Q Consensus 85 l~~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~ 164 (221)
+ .+.|++. +...+.+.++++.++++ +.++++|++.. ++.+...+.+.+ +++++|+++||++|++.|+
T Consensus 184 ~----~~~g~~~-~~~~~~~~~~~~~a~~~--g~~v~ldls~~-----~~~~~~~~~l~~-ll~~~Dil~~Ne~Ea~~l~ 250 (372)
T 3uq6_A 184 Y----YIAGFVI-NTCYEGMLKIAKHSLEN--EKLFCFNLSAP-----FLSQFNTKEVDE-MISYSNIVFGNESEAEAYG 250 (372)
T ss_dssp E----EEEGGGH-HHHHHHHHHHHHHHHHT--TCEEEEECCCH-----HHHHHCHHHHHH-HHTTCSEEEEEHHHHHHHH
T ss_pred E----EEecccc-cccHHHHHHHHHHHHHc--CCeEeeccccc-----hhhhhhHHHHHH-HhhcCCcccCCHHHHHHHh
Confidence 2 3556654 45578888999999998 99999998421 122333455665 8899999999999999998
Q ss_pred CCCCCCHHHHHHHHHHHHH-------cCCCeEEEeeeeeCCcEE
Q 027620 165 GFRIGSEADGREACKILHA-------AGPAKVVITSINIDGNLF 201 (221)
Q Consensus 165 g~~~~s~~~~~~a~~~L~~-------~G~~~VvVT~G~~~~~~~ 201 (221)
+....+.++.+++++.+.+ .+++.|+||+|+ +|..+
T Consensus 251 ~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~vvvT~G~-~G~~~ 293 (372)
T 3uq6_A 251 EVHGLLEDTVHATARYIADLPFADGKKRKRLVIITRGK-NPLLY 293 (372)
T ss_dssp HHTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETT-EEEEE
T ss_pred CCCCCchhHHHHHHHHHhhhhhhhhcCCceEEEEcCCC-CceEE
Confidence 7654445678888888765 356789999998 66543
No 47
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.25 E-value=2.8e-12 Score=109.51 Aligned_cols=145 Identities=19% Similarity=0.199 Sum_probs=91.8
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeE-EeecCCCCCcc-----------cee--eCCHHHHHHHHHHHHhcCccc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSV-QFSNHTGYPTF-----------KGQ--VLNGQQLCDLIEGLEANNLLY 86 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~-~~~~~~~~~~~-----------~G~--~l~~~~i~~~l~~i~~~~~l~ 86 (221)
.+|.+|+|. .++.|+++|| ++... ..+|...+..+ .|. .+++++++ .+.++..+
T Consensus 71 ~i~~vG~D~~G~~l~~~L~~~gV---~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~~~~~~--~~~~~~~~--- 142 (311)
T 1vm7_A 71 FVTCIGNDDYSDLLIENYEKLGI---TGYIRVSLPTGRAFIEVDKTGQNRIIIFPGANAELKKELID--WNTLSESD--- 142 (311)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTE---EEEEECSSCCCEEEEEECTTSCEEEEEECGGGGGCCGGGCC--HHHHTTCS---
T ss_pred EEEEECCChHHHHHHHHHHHCCC---EEEEcCCCCCeEEEEEECCCCCEEEEEecCccccCCHHHhC--hhhcccCC---
Confidence 468888885 5567999998 34332 11121111111 121 45555554 23454443
Q ss_pred ccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCC
Q 027620 87 YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGF 166 (221)
Q Consensus 87 ~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~ 166 (221)
.+.++.. .+.+.+.++ ++++ +.++++||++... +.. .+++++|+++||++|++.|+|.
T Consensus 143 --~v~~~~~---~~~~~~~~~---a~~~--~~~v~~Dp~~~~~---~~~---------~ll~~~dil~~N~~E~~~l~g~ 200 (311)
T 1vm7_A 143 --ILLLQNE---IPFETTLEC---AKRF--NGIVIFDPAPAQG---INE---------EIFQYLDYLTPNEKEIEALSKD 200 (311)
T ss_dssp --EEEECSS---SCHHHHHHH---HHHC--CSEEEECCCSCTT---CCG---------GGGGGCSEECCBHHHHHHHHHH
T ss_pred --EEEEeCC---CCHHHHHHH---HHHc--CCEEEEeCcchhh---hhH---------HHHhhCCEEeCCHHHHHHHhCC
Confidence 3444321 223444333 6776 8899999986422 121 3889999999999999999986
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCcE
Q 027620 167 RIGSEADGREACKILHAAGPAKVVITSINIDGNL 200 (221)
Q Consensus 167 ~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~ 200 (221)
+..+.+++.+++++|.++|++.|+||+|+ +|..
T Consensus 201 ~~~~~~~~~~~~~~l~~~g~~~vvvT~G~-~G~~ 233 (311)
T 1vm7_A 201 FFGEFLTVEKAAEKFLELGVKNVIVKLGD-KGVL 233 (311)
T ss_dssp HHSCCCCHHHHHHHHHHTTCSEEEEECGG-GCEE
T ss_pred CCCChhHHHHHHHHHHHcCCCEEEEEECC-CCeE
Confidence 44444578888999999999999999999 6643
No 48
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=99.24 E-value=3.2e-12 Score=108.69 Aligned_cols=154 Identities=15% Similarity=0.131 Sum_probs=99.9
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEE-eecCCCCCcc--ce---------------eeCCHHHHHHHHHHHHhc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ-FSNHTGYPTF--KG---------------QVLNGQQLCDLIEGLEAN 82 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~-~~~~~~~~~~--~G---------------~~l~~~~i~~~l~~i~~~ 82 (221)
.+|.+|+|. .++.|+++||+++++.... .+|...+... .| ..++++++.. +.++..
T Consensus 52 ~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~ 129 (311)
T 2dcn_A 52 IIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDE--EYVKSA 129 (311)
T ss_dssp EECEEESSHHHHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCH--HHHTTC
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcCh--HHHcCC
Confidence 588999886 5567999999998876532 1111111100 01 2445444433 234444
Q ss_pred CcccccEEEEeecC--ChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCC--CceEEecCHH
Q 027620 83 NLLYYTHLLTGYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP--VASMLTPNQF 158 (221)
Q Consensus 83 ~~l~~~~v~~G~l~--~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~--~~dvi~pN~~ 158 (221)
+++ .+.|+.+ ++.+.+.+.++++.+++ . ++||+++.. +|..++..+.+++ +++ ++|+++||++
T Consensus 130 ~~v----~~~g~~~~~~~~~~~~~~~~~~~a~~-----~-~~D~~~~~~--~~~~~~~~~~~~~-~l~~~~~dil~~N~~ 196 (311)
T 2dcn_A 130 DLV----HSSGITLAISSTAKEAVYKAFEIASN-----R-SFDTNIRLK--LWSAEEAKREILK-LLSKFHLKFLITDTD 196 (311)
T ss_dssp SEE----EEEHHHHHSCHHHHHHHHHHHHHCSS-----E-EEECCCCTT--TSCHHHHHHHHHH-HHHHCCEEEEEEEHH
T ss_pred CEE----EEeCcccccChHHHHHHHHHHHHHHH-----h-CcCccCchh--hCChHHHHHHHHH-HHhhcCCcEEECCHH
Confidence 332 3456544 35556777777777643 2 899987633 2322334455665 889 9999999999
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCcE
Q 027620 159 EAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNL 200 (221)
Q Consensus 159 Ea~~l~g~~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~ 200 (221)
|++.|+|. ++.++++++|+++ ++.|+||+|+ +|..
T Consensus 197 E~~~l~g~-----~~~~~~~~~l~~~-~~~vvvt~G~-~G~~ 231 (311)
T 2dcn_A 197 DSKIILGE-----SDPDKAAKAFSDY-AEIIVMKLGP-KGAI 231 (311)
T ss_dssp HHHHHHSC-----CCHHHHHHHHTTT-EEEEEEEEET-TEEE
T ss_pred HHHHHhCC-----CCHHHHHHHHHHh-CCEEEEEECC-CCcE
Confidence 99999986 3567788888888 8999999998 6653
No 49
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=99.23 E-value=2.6e-12 Score=111.34 Aligned_cols=145 Identities=19% Similarity=0.211 Sum_probs=95.6
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEE-eecCC--------C---CCcccee--eCCHHHHHHHHHHHHhcCccc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ-FSNHT--------G---YPTFKGQ--VLNGQQLCDLIEGLEANNLLY 86 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~-~~~~~--------~---~~~~~G~--~l~~~~i~~~l~~i~~~~~l~ 86 (221)
.+|.+|+|. .++.|+++||+++++.... .+|.. + +....|. .++++++. .+.+...
T Consensus 85 ~i~~vG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~~~~~~~~l~--~~~l~~~---- 158 (343)
T 2rbc_A 85 LWGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACT--PEDIALF---- 158 (343)
T ss_dssp EECEEESSHHHHHHHHHHHHTTEECTTCEEETTCCCEEEEEEECTTSCEEEEEECCGGGGSSCCCCC--HHHHTTC----
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCceeeEEEcCCCCCceEEEEECCCCCEEEEEcCCCcccCChhHhc--HhhhCCC----
Confidence 588999886 5567999999998876431 11211 1 1001121 23323332 1234433
Q ss_pred ccEEEEe-ecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcC
Q 027620 87 YTHLLTG-YIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (221)
Q Consensus 87 ~~~v~~G-~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g 165 (221)
+.+.++ +. .+.+.++++.++++ ++++++||... . +.+++.+++++|+++||++|++.|+|
T Consensus 159 -~~v~~~~~~-----~~~~~~~~~~a~~~--g~~v~~Dp~~~-------~----~~~~~~ll~~~dil~~N~~Ea~~l~g 219 (343)
T 2rbc_A 159 -DAVLVDVRW-----PELALDVLTVARAL--GKPAILDGDVA-------P----VETLEGLAPAATHIVFSEPAATRLTG 219 (343)
T ss_dssp -SEEEECSSS-----HHHHHHHHHHHHHT--TCCEEEEECSC-------C----HHHHHHHGGGCSEEEEEHHHHHHHHC
T ss_pred -CEEEEcCCC-----HHHHHHHHHHHHHC--CCEEEEECCcc-------c----cccHHHHHhcCCEEEeCHHHHHHHcC
Confidence 334443 32 24677788889888 89999999431 1 12222278999999999999999998
Q ss_pred CCCCCHHHHHHHHHHHHHcCC-CeEEEeeeeeCCcE
Q 027620 166 FRIGSEADGREACKILHAAGP-AKVVITSINIDGNL 200 (221)
Q Consensus 166 ~~~~s~~~~~~a~~~L~~~G~-~~VvVT~G~~~~~~ 200 (221)
.+ ++.++++.|.++|+ +.|+||+|+ +|..
T Consensus 220 ~~-----~~~~~~~~l~~~g~~~~VvvT~G~-~G~~ 249 (343)
T 2rbc_A 220 LE-----TVKDMLPVLHARYPQTFIAVTAGP-AGCW 249 (343)
T ss_dssp CS-----SHHHHHHHHHHHSTTSEEEEECGG-GCEE
T ss_pred CC-----CHHHHHHHHHHhCCCceEEEEECC-cceE
Confidence 73 67788889999999 999999998 6753
No 50
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=99.21 E-value=5.5e-12 Score=107.01 Aligned_cols=135 Identities=18% Similarity=0.096 Sum_probs=90.5
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEEeecCCCCCcc-----------cee--eCCHHHHHHHHHHHHhcCcccc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYPTF-----------KGQ--VLNGQQLCDLIEGLEANNLLYY 87 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~~~~~~~~~~~-----------~G~--~l~~~~i~~~l~~i~~~~~l~~ 87 (221)
.+|.+|+|. .++.|+++||+++++.....+|...+..+ .|. .+++++++...+.++. .
T Consensus 58 ~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~~a~~~l~~~~~~~~~~~~~~-----~ 132 (299)
T 3ikh_A 58 LIAATGNDSNGAWIRQQIKNEPLMLLPDGHFNQHSDTSIILNSADGDNAIITTTAAADTFSLDEMIPHMADAVA-----G 132 (299)
T ss_dssp EECCCCSSHHHHHHHHHGGGSSCEEESSSCCSSCCEEEEEECSSSCSCEEEEECHHHHHCCHHHHGGGGTTCCT-----T
T ss_pred EEEEECCCHHHHHHHHHHHHcCCceeeeEecCCCCcEEEEEEcCCCCeEEEEeCCccccCCHHHHHHHHhhhcc-----C
Confidence 588899885 55679999999998743221121111111 122 5666665543333333 3
Q ss_pred cEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCCC
Q 027620 88 THLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFR 167 (221)
Q Consensus 88 ~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~~ 167 (221)
+.+.++. ..+.+.+.++++.++++ +.++++||.+... + ++ .+++++|+++||++|++.|+|
T Consensus 133 ~~v~~~g---~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~---~--------~~-~ll~~~dil~~N~~E~~~l~g-- 193 (299)
T 3ikh_A 133 DILLQQG---NFSLDKTRALFQYARSR--GMTTVFNPSPVNP---D--------FC-HLWPLIDIAVVNESEAELLQP-- 193 (299)
T ss_dssp CEEEECS---CSCHHHHHHHHHHHHHT--TCEEEECCCSCCG---G--------GG-GCGGGCSEEEEEHHHHHHHCC--
T ss_pred CEEEECC---CCCHHHHHHHHHHHHHc--CCEEEEccccchh---h--------HH-HHHhhCCEEEecHHHHHHHhc--
Confidence 4444432 22367788889999988 8999999965421 1 11 388999999999999999987
Q ss_pred CCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCcE
Q 027620 168 IGSEADGREACKILHAAGPAKVVITSINIDGNL 200 (221)
Q Consensus 168 ~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~ 200 (221)
+|++.|+||+|+ +|..
T Consensus 194 ----------------~g~~~vvvt~G~-~G~~ 209 (299)
T 3ikh_A 194 ----------------YGVKTLVITQGA-AGAW 209 (299)
T ss_dssp ----------------CSCSEEEEECGG-GCEE
T ss_pred ----------------CCCCEEEEEECC-CceE
Confidence 689999999998 7753
No 51
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=99.17 E-value=8.5e-12 Score=106.50 Aligned_cols=151 Identities=18% Similarity=0.247 Sum_probs=95.0
Q ss_pred ccCccchhh---cHHHHHhcCCceeeeeeEE-eecC--CC--CCcccee-eC--CHHHHHH----HHHHHHhcCcccccE
Q 027620 25 VQGYVGNKS---AVFPLQLLGYDVDPIHSVQ-FSNH--TG--YPTFKGQ-VL--NGQQLCD----LIEGLEANNLLYYTH 89 (221)
Q Consensus 25 ~~G~vG~d~---~~~~l~~~gi~~~~v~~~~-~~~~--~~--~~~~~G~-~l--~~~~i~~----~l~~i~~~~~l~~~~ 89 (221)
.+|.+|+|. .++.|+++||+++++.... ..|. .+ .....+. .+ ....... ..+.++ .++.
T Consensus 48 ~ig~vG~D~g~~~~~~L~~~gVd~~~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 122 (313)
T 3kd6_A 48 MVGVVGSDFGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQLNVFAEFDPHVPQYYR-----DSKF 122 (313)
T ss_dssp EEEEEETTSCHHHHHHHHHTTEEEEEEEEETTCCCEEEEEEECTTSSCEEEEEEECGGGTTCCCCCCGGGT-----TCSE
T ss_pred EEEecCCCcHHHHHHHHHHcCCCccceEEcCCCCeeeeeeeeeccccccceeecccchHhhcCccchHHHc-----cCCE
Confidence 466777764 5678999999999886552 1110 01 0101010 00 0000000 011222 2556
Q ss_pred EEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCCCCC
Q 027620 90 LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIG 169 (221)
Q Consensus 90 v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~~~~ 169 (221)
+.+|++++ +...++++.+ ++ +.++++||.. ++.+...+.+++ +++++|+++||++|++.|+|.
T Consensus 123 v~~~~~~~----~~~~~~~~~~-~~--~~~v~~Dp~~------~~~~~~~~~~~~-~l~~~dil~~N~~E~~~l~g~--- 185 (313)
T 3kd6_A 123 VCLGNIDP----ELQLKVLDQI-DD--PKLVVCDTMN------FWIEGKPEELKK-VLARVDVFIVNDSEARLLSGD--- 185 (313)
T ss_dssp EEECSSCH----HHHHHHHTTC-SS--CSEEEEECCH------HHHHHCHHHHHH-HHTTCSEEEEEHHHHHHHHSC---
T ss_pred EEEcCCCH----HHHHHHHHHH-hh--CCEEEEcChh------hhhhhhHHHHHH-HHhcCCEEEeCHHHHHHHhCC---
Confidence 77788753 3334555655 34 7789999921 122334456666 889999999999999999996
Q ss_pred CHHHHHHHHHHHHHcCCCeEEEeeeeeCCcE
Q 027620 170 SEADGREACKILHAAGPAKVVITSINIDGNL 200 (221)
Q Consensus 170 s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~ 200 (221)
+++.++++.|.++|++.|+||+|+ +|..
T Consensus 186 --~~~~~~~~~l~~~g~~~vvvt~G~-~G~~ 213 (313)
T 3kd6_A 186 --PNLVKTARIIREMGPKTLIIKKGE-HGAL 213 (313)
T ss_dssp --SCHHHHHHHHHTTSCSEEEEECTT-SCEE
T ss_pred --CCHHHHHHHHHHcCCCEEEEeeCC-CcEE
Confidence 367888999999999999999998 7754
No 52
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=99.13 E-value=5.3e-12 Score=109.18 Aligned_cols=136 Identities=15% Similarity=0.145 Sum_probs=86.3
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEEeecCC---------CCCcc--cee-----eCCHHHHHHHHHHHHhcCc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHT---------GYPTF--KGQ-----VLNGQQLCDLIEGLEANNL 84 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~~~~~~---------~~~~~--~G~-----~l~~~~i~~~l~~i~~~~~ 84 (221)
.+|.+|+|. .++.|+++||+++++......+++ +-..+ .+. .+.+.++. ..+.++..++
T Consensus 75 ~ig~vG~D~~G~~l~~~L~~~GVdt~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~-~~~~~~~~~~ 153 (351)
T 4gm6_A 75 IATVVPANPIGKMAVEHLWRHQVDTAFVVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWD-LSELLKGIRV 153 (351)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTEECTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCC-HHHHHTTEEE
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCcccccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccC-HHHHHhhccc
Confidence 588899887 556899999999988654211111 10001 110 11111111 1123444433
Q ss_pred ccccEEEEeecC--ChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHH
Q 027620 85 LYYTHLLTGYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQ 162 (221)
Q Consensus 85 l~~~~v~~G~l~--~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~ 162 (221)
+ .+.|+.+ ++...+.+.++++.+|++ +++|+|||+.++. +|..++..+.+++ +++++|+++||++|++.
T Consensus 154 ~----~~~g~~l~~~~~~~~~~~~~~~~ak~~--g~~v~~D~n~r~~--lw~~~~~~~~~~~-~l~~~dil~~N~~Ea~~ 224 (351)
T 4gm6_A 154 L----HVSGITIALSTFWLEMVVKIIREAKRN--GIKISFDMNYRAK--LWELEAAKRAYQQ-LLPLVDYCSAGQMDAVA 224 (351)
T ss_dssp E----EEEHHHHHHCHHHHHHHHHHHHHHHHT--TCEEEEECCCCTT--TSCHHHHHHHHHH-HGGGCSEEECCHHHHHH
T ss_pred c----eecccchhhchhHHHHHHHHHHHHHHc--CCCcccCCCcCch--hhhhhhHHHHHHH-HHHhCCccccCHHHHHH
Confidence 2 2334322 455678899999999999 9999999998754 3434555566666 99999999999999999
Q ss_pred hcCCCCCC
Q 027620 163 LTGFRIGS 170 (221)
Q Consensus 163 l~g~~~~s 170 (221)
+++.....
T Consensus 225 l~g~~~~~ 232 (351)
T 4gm6_A 225 FFEISSET 232 (351)
T ss_dssp TSCCCTTC
T ss_pred HhCCCCch
Confidence 99976443
No 53
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=99.05 E-value=1.1e-10 Score=99.35 Aligned_cols=150 Identities=15% Similarity=0.158 Sum_probs=96.5
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEE-eecCC-------C---CCccce---eeCCHHHHHHHHHHHHhcCccc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ-FSNHT-------G---YPTFKG---QVLNGQQLCDLIEGLEANNLLY 86 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~-~~~~~-------~---~~~~~G---~~l~~~~i~~~l~~i~~~~~l~ 86 (221)
.+|.+|+|. .++.|+++||+++++.... ..|.. + +..+.| ..+++++++. +.++..+++
T Consensus 52 ~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~g~~~~~~~~~~a~~~l~~~~~~~--~~l~~~~~~- 128 (313)
T 3ewm_A 52 LISKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKGASPSFLLYDDVAYFNMTLNDINW--DIVEEAKIV- 128 (313)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCBCTTEEEESSSCCEEEEEECSSSSCEEEECCSSGGGCCCGGGCCH--HHHHHCSEE-
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCccceeecCCCCceEEEEEecCCCcceEeeccCHHHhCChhhCCH--HHhCCCCEE-
Confidence 588899886 5567999999998876432 11111 1 111123 2456555542 245555543
Q ss_pred ccEEEEeecC-ChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCC--chhHHHHHHHhcCCCceEEecCHHHHHHh
Q 027620 87 YTHLLTGYIG-SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYV--PSELVSVYREKVVPVASMLTPNQFEAEQL 163 (221)
Q Consensus 87 ~~~v~~G~l~-~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~--~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l 163 (221)
.+.|++. .+.+.+.+.++++.++ + ++++++||+++.. +|. .++..+.+++ +++++|+++||++|++.|
T Consensus 129 ---~~~g~~~~~~~~~~~~~~~~~~a~-~--~~~v~~Dp~~~~~--~~~~~~~~~~~~~~~-~l~~~di~~~N~~E~~~l 199 (313)
T 3ewm_A 129 ---NFGSVILARNPSRETVMKVIKKIK-G--SSLIAFDVNLRLD--LWRGQEEEMIKVLEE-SIKLADIVKASEEEVLYL 199 (313)
T ss_dssp ---EEESGGGGSTTHHHHHHHHHHHHB-T--TBEEEEECCCCGG--GGTTCHHHHHHHHHH-HHHHCSEEEEEHHHHHHH
T ss_pred ---EEcCcccCCcchHHHHHHHHHHhc-c--CCEEEEeCCCChH--HcCCCHHHHHHHHHH-HHhhCCEEecCHHHHHHH
Confidence 3455533 4556788888999887 4 6899999976532 222 2344455555 889999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCcE
Q 027620 164 TGFRIGSEADGREACKILHAAGPAKVVITSINIDGNL 200 (221)
Q Consensus 164 ~g~~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~ 200 (221)
++.... ..+...|+||+|+ +|..
T Consensus 200 ~~~~~~-------------~~~~~~vviT~G~-~G~~ 222 (313)
T 3ewm_A 200 ENQGVE-------------VKGSMLTAITLGP-KGCR 222 (313)
T ss_dssp HTTTCC-------------CCCSSEEEEECGG-GEEE
T ss_pred hccCcc-------------ccCceEEEEEECC-CCeE
Confidence 876431 1245568999998 6643
No 54
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=99.03 E-value=3.8e-11 Score=101.79 Aligned_cols=143 Identities=11% Similarity=0.015 Sum_probs=90.2
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeE-EeecCCCCCcc--cee-----------eCCHHHHHHHHHHHHhcCccc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSV-QFSNHTGYPTF--KGQ-----------VLNGQQLCDLIEGLEANNLLY 86 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~-~~~~~~~~~~~--~G~-----------~l~~~~i~~~l~~i~~~~~l~ 86 (221)
.+|.+|+|. .++.|+++||+++.+... ..+|...+..+ .|+ .+++++ +.. -.
T Consensus 61 ~i~~vG~D~~g~~i~~~l~~~gv~~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-------~~~---~~ 130 (302)
T 2c4e_A 61 LLSCVGYDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFLWGAAKHYKELN-------PPN---FN 130 (302)
T ss_dssp EECEECTTTTTSHHHHHHHHTTCBCTTCEECSSSCCCEEEEEECSSCCEECCEECGGGGGGGGCC-------CCC---CC
T ss_pred EEEEEeCCCchHHHHHHHHHcCCcccceEeeCCCCCceEEEEECCCCCEEEEEeCChhhhCCHhh-------cCc---cc
Confidence 588999887 556799999999877543 21222212111 121 121111 111 12
Q ss_pred ccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCC
Q 027620 87 YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGF 166 (221)
Q Consensus 87 ~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~ 166 (221)
.+.+.++. ..+ +.+.++++.++++ + ++++||+++.. ++. .+.+++ +++++|+++||++|++.|+|.
T Consensus 131 ~~~v~~~~---~~~-~~~~~~~~~a~~~--g-~v~~D~~~~~~---~~~---~~~~~~-~l~~~dil~~N~~E~~~l~g~ 196 (302)
T 2c4e_A 131 TEIVHIAT---GDP-EFNLKCAKKAYGN--N-LVSFDPGQDLP---QYS---KEMLLE-IIEHTNFLFMNKHEFERASNL 196 (302)
T ss_dssp EEEEEECS---SCH-HHHHHHHHHHBTT--B-EEEECCGGGGG---GCC---HHHHHH-HHHTCSEEEEEHHHHHHHHHH
T ss_pred CCEEEEeC---CCc-HHHHHHHHHHHhc--C-CEEEeCchhhh---hhh---HHHHHH-HHhcCCEEEcCHHHHHHHhCC
Confidence 44455443 122 7788889999888 8 99999985422 122 234555 889999999999999999875
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCcE
Q 027620 167 RIGSEADGREACKILHAAGPAKVVITSINIDGNL 200 (221)
Q Consensus 167 ~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~ 200 (221)
+..+.+ +|+++ ++.|+||+|+ +|..
T Consensus 197 ~~~~~~-------~l~~~-~~~vvvt~G~-~G~~ 221 (302)
T 2c4e_A 197 LNFEID-------DYLER-VDALIVTKGS-KGSV 221 (302)
T ss_dssp HTCCHH-------HHHTT-CSEEEEECGG-GCEE
T ss_pred CCccHH-------HHHhc-CCEEEEEECC-CceE
Confidence 432211 67777 8999999999 6753
No 55
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=99.02 E-value=2e-10 Score=98.92 Aligned_cols=147 Identities=19% Similarity=0.115 Sum_probs=90.8
Q ss_pred ccCccchhh--cHHHHHhcCCceeeeeeE-EeecCCCCCcc-----------cee--eCCHHHHHHHHHHHHhcCccccc
Q 027620 25 VQGYVGNKS--AVFPLQLLGYDVDPIHSV-QFSNHTGYPTF-----------KGQ--VLNGQQLCDLIEGLEANNLLYYT 88 (221)
Q Consensus 25 ~~G~vG~d~--~~~~l~~~gi~~~~v~~~-~~~~~~~~~~~-----------~G~--~l~~~~i~~~l~~i~~~~~l~~~ 88 (221)
.+|.+|+|. .++.|+++||+++++... ..+|...+..+ .|. .++++++......+... +
T Consensus 76 ~i~~vG~D~g~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~~~~~l~~~-----~ 150 (334)
T 2pkf_A 76 LVGAAGADFADYRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPGAMSEARNIKLADVVSAIGKP-----E 150 (334)
T ss_dssp EECEECGGGHHHHHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEECGGGGGGGGCCHHHHHHHHCSC-----S
T ss_pred EEEEEeCchHHHHHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEECCchhhhCCHhhcChhhhhhcCC-----C
Confidence 578888875 455799999998877543 11111111110 121 23333444432223333 3
Q ss_pred EEEE-eecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCCC
Q 027620 89 HLLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFR 167 (221)
Q Consensus 89 ~v~~-G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~~ 167 (221)
.+.+ ++. .+.+.++++.++++ ++++++||+++.. +++. +.+++ +++++|+++||++|++.|+|.+
T Consensus 151 ~v~~~~~~-----~~~~~~~~~~a~~~--g~~v~~D~~~~~~---~~~~---~~l~~-~l~~~dil~~N~~E~~~l~g~~ 216 (334)
T 2pkf_A 151 LVIIGAND-----PEAMFLHTEECRKL--GLAFAADPSQQLA---RLSG---EEIRR-LVNGAAYLFTNDYEWDLLLSKT 216 (334)
T ss_dssp EEEEESCC-----HHHHHHHHHHHHHH--TCCEEEECGGGGG---TSCH---HHHHT-TTTTCSEEEEEHHHHHHHHHHH
T ss_pred EEEEcCCC-----hHHHHHHHHHHHhc--CCeEEEeccchhh---hhhH---HHHHH-HHhcCCEEecCHHHHHHHhccC
Confidence 3433 332 35677888889888 8999999987642 2232 34454 8999999999999999998754
Q ss_pred CCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCc
Q 027620 168 IGSEADGREACKILHAAGPAKVVITSINIDGN 199 (221)
Q Consensus 168 ~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~ 199 (221)
..+.+ .+.+. ++.|+||+|+ +|.
T Consensus 217 ~~~~~-------~l~~~-~~~vvvt~G~-~G~ 239 (334)
T 2pkf_A 217 GWSEA-------DVMAQ-IDLRVTTLGP-KGV 239 (334)
T ss_dssp CCCHH-------HHHTT-CSCEEEECGG-GCE
T ss_pred CCCHH-------HHHhc-CCEEEEEeCC-CCe
Confidence 32222 23444 8899999998 675
No 56
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=98.97 E-value=6.2e-11 Score=100.45 Aligned_cols=148 Identities=16% Similarity=0.092 Sum_probs=93.0
Q ss_pred ccCccchhh--cHHHHHhcCCceeeeeeEEeecCCC------------CCccc--eeeCCHHHHHHHHHHHHhcCccccc
Q 027620 25 VQGYVGNKS--AVFPLQLLGYDVDPIHSVQFSNHTG------------YPTFK--GQVLNGQQLCDLIEGLEANNLLYYT 88 (221)
Q Consensus 25 ~~G~vG~d~--~~~~l~~~gi~~~~v~~~~~~~~~~------------~~~~~--G~~l~~~~i~~~l~~i~~~~~l~~~ 88 (221)
.+|.+|+|. .++.|+++||+++.+... .+++ +..+. +..+++++++. . ..+
T Consensus 55 ~i~~vG~D~~~~~~~L~~~gVd~~~v~~~---~~t~~~~i~~~~g~~~~~~~~~~~~~l~~~~~~~-----~-----~~~ 121 (298)
T 1vk4_A 55 VITKCTREDVSKFSFLRDNGVEVVFLKSP---RTTSIENRYGSDPDTRESFLISAADPFTESDLAF-----I-----EGE 121 (298)
T ss_dssp EEEEECTTTGGGGTTTGGGTCEEEEEECS---SCEEEEEEC-----CCEEEEEECCCCCCGGGGGG-----C-----CSS
T ss_pred EEEEEcCCHHHHHHHHHHcCCceEEEecC---CCcEEEEEEcCCCCeeEEEeccccccCCHHHcCc-----C-----CCC
Confidence 577888876 445799999999877531 1111 11111 23555444322 1 245
Q ss_pred EEEEeec-CChhHHHHHHHHHHHHHhcCCCCeEEEccccc-CC--CCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhc
Q 027620 89 HLLTGYI-GSVSFLNTILQVVEKLRSINPNLIYVCDPVMG-DE--GKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (221)
Q Consensus 89 ~v~~G~l-~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~-~~--g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~ 164 (221)
.+.+|.+ +.+. ..++++.++++ +.++++||++. .. +..+ ....++.+++ +++++|+++||++|++.|+
T Consensus 122 ~v~~~~~~~~~~----~~~~~~~~~~~--g~~v~~D~~~~~~~~~~~~~-~~~~~~~~~~-~l~~~dil~~N~~E~~~l~ 193 (298)
T 1vk4_A 122 AVHINPLWYGEF----PEDLIPVLRRK--VMFLSADAQGFVRVPENEKL-VYRDWEMKEK-YLKYLDLFKVDSREAETLT 193 (298)
T ss_dssp EEEECCSSTTSS----CGGGHHHHHHH--CSEEEEETHHHHEEEETTEE-EECCCTTHHH-HGGGCSEEEEEHHHHHHHH
T ss_pred EEEECCcccccc----cHHHHHHHHHc--CCEEEEecCccccccccccc-cccchHHHHh-hcccCCEEecCHHHHHHHh
Confidence 5666665 3222 23566777777 88999999731 00 0000 0000112333 8899999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCcE
Q 027620 165 GFRIGSEADGREACKILHAAGPAKVVITSINIDGNL 200 (221)
Q Consensus 165 g~~~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~ 200 (221)
|.+ ++.++++.|.++|++.|+||+ + +|..
T Consensus 194 g~~-----~~~~~~~~l~~~g~~~vvvT~-~-~G~~ 222 (298)
T 1vk4_A 194 GTN-----DLRESCRIIRSFGAKIILATH-A-SGVI 222 (298)
T ss_dssp SCS-----CHHHHHHHHHHTTCSSEEEEE-T-TEEE
T ss_pred CCC-----CHHHHHHHHHhcCCCEEEEEc-C-CCcE
Confidence 873 577788889999999999999 4 7753
No 57
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=98.94 E-value=2.2e-10 Score=97.70 Aligned_cols=132 Identities=18% Similarity=0.176 Sum_probs=86.9
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeEEeecCCCCCcc-----------cee--eCCHHHHHHHHHHHHhcCcccc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYPTF-----------KGQ--VLNGQQLCDLIEGLEANNLLYY 87 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~~~~~~~~~~~~-----------~G~--~l~~~~i~~~l~~i~~~~~l~~ 87 (221)
.+|.+|+|. .++.|+++||+++++.....+|...+..+ .|. .++ ++.+.++. +
T Consensus 75 ~i~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~-----~~~~~l~~-----~ 144 (310)
T 3go6_A 75 FSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT-----PVPSAVAN-----C 144 (310)
T ss_dssp EECEECSSHHHHHHHHHHHHTTCBCTTCEECSSCCEEEEEEECTTSCEEEEEECGGGGGCC-----CCTTTTTT-----C
T ss_pred EEEEECCCHHHHHHHHHHHHcCCccceeEecCCCCCEEEEEEcCCCCEEEEecCChhhhHH-----HHHHHhhc-----C
Confidence 588899885 55679999999998853321111111111 121 222 11122332 3
Q ss_pred cEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCCC
Q 027620 88 THLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFR 167 (221)
Q Consensus 88 ~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~~ 167 (221)
+.+.++. +.+.+.+.++++.++++ +.++++||++... . .+.+++ +++++|+++||++|++.|++.
T Consensus 145 ~~v~~~~---~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~----~----~~~~~~-ll~~~dil~~N~~Ea~~l~g~- 209 (310)
T 3go6_A 145 DVLLTQL---EIPVATALAAARAAQSA--DAVVMVNASPAGQ----D----RSSLQD-LAAIADVVIANEHEANDWPSP- 209 (310)
T ss_dssp SEEEECS---SSCHHHHHHHHHHHHHT--TCEEEEECCSSSC----C----HHHHHH-HHHHCSEEEEEHHHHHHSSSC-
T ss_pred CEEEECC---CCCHHHHHHHHHHHHHc--CCEEEEcCCcccc----c----hHHHHH-HHhhCCEEEeCHHHHHHHhCC-
Confidence 4444432 33467788899999988 8999999975432 1 244555 889999999999999999874
Q ss_pred CCCHHHHHHHHHHHHHcCCCeEEEeeeeeCCcE
Q 027620 168 IGSEADGREACKILHAAGPAKVVITSINIDGNL 200 (221)
Q Consensus 168 ~~s~~~~~~a~~~L~~~G~~~VvVT~G~~~~~~ 200 (221)
++.|+||+|+ +|..
T Consensus 210 ------------------~~~vvvt~G~-~Ga~ 223 (310)
T 3go6_A 210 ------------------PTHFVITLGV-RGAR 223 (310)
T ss_dssp ------------------CSEEEEECGG-GCEE
T ss_pred ------------------CCEEEEEECC-CCEE
Confidence 6889999998 7754
No 58
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=98.90 E-value=1.2e-09 Score=93.07 Aligned_cols=145 Identities=12% Similarity=0.076 Sum_probs=88.8
Q ss_pred ccCccchhh----cHHHHHhcCCceeeeeeE-EeecCCCCCc------------cc--eeeCCHHHHHHHHHHHHhcCcc
Q 027620 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSV-QFSNHTGYPT------------FK--GQVLNGQQLCDLIEGLEANNLL 85 (221)
Q Consensus 25 ~~G~vG~d~----~~~~l~~~gi~~~~v~~~-~~~~~~~~~~------------~~--G~~l~~~~i~~~l~~i~~~~~l 85 (221)
.+|.+|+|. .++.|+++||+++++... ...|.+.+.. .. +..+++++++.. .++.
T Consensus 73 ~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~~--~l~~---- 146 (312)
T 2hlz_A 73 FMGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEKV--DLTQ---- 146 (312)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEECCCCCCCCHHHHHTS--CGGG----
T ss_pred EEEEecCchHHHHHHHHHHHcCCCCccceeccCCCCCeEEEEEECCCCceEEEecCCccccCCHHHhhHh--hhcc----
Confidence 588899886 556799999999877543 2222222111 11 235666666532 2333
Q ss_pred cccEEEEeecCChhHHHHHHHHHHHHHhcC-C-----CCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHH
Q 027620 86 YYTHLLTGYIGSVSFLNTILQVVEKLRSIN-P-----NLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFE 159 (221)
Q Consensus 86 ~~~~v~~G~l~~~~~~~~i~~~i~~ak~~~-~-----~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~E 159 (221)
.+.+.++..+ .+.+.++++.++++. + +.++++||..... .++ .+++++|+++||++|
T Consensus 147 -~~~v~~~~~~----~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~~~-----------~~~-~~l~~~dil~~n~~e 209 (312)
T 2hlz_A 147 -FKWIHIEGRN----ASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKPRE-----------ELF-QLFGYGDVVFVSKDV 209 (312)
T ss_dssp -EEEEEEECSS----HHHHHHHHHHHHHHHTTSCGGGCCEEEEEECSCCG-----------GGG-GGGGSSSEEEECHHH
T ss_pred -CCEEEEeccC----HHHHHHHHHHHHHhcccccCCCCeEEEEEcccchH-----------HHH-HHHhcCCEEEEcHHH
Confidence 3334333322 244556667666541 1 4689999853211 122 388999999999999
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHHHcCC--CeEEEeeeeeCCc
Q 027620 160 AEQLTGFRIGSEADGREACKILHAAGP--AKVVITSINIDGN 199 (221)
Q Consensus 160 a~~l~g~~~~s~~~~~~a~~~L~~~G~--~~VvVT~G~~~~~ 199 (221)
++.+ |. ++.+++++.+.+++. +.|+||+|+ +|.
T Consensus 210 a~~l-g~-----~~~~~~~~~l~~~~~~g~~vvvt~G~-~G~ 244 (312)
T 2hlz_A 210 AKHL-GF-----QSAEEALRGLYGRVRKGAVLVCAWAE-EGA 244 (312)
T ss_dssp HHHT-TC-----CSHHHHHHHHGGGSCTTCEEEEECGG-GCE
T ss_pred HHHc-CC-----CCHHHHHHHHHHhcCCCCEEEEEecc-cCe
Confidence 9987 64 245566677766543 799999998 675
No 59
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=98.84 E-value=4.3e-10 Score=96.53 Aligned_cols=153 Identities=14% Similarity=0.184 Sum_probs=88.3
Q ss_pred ccCccch-hh--cHHHHHhcCCceeeeeeEE-eecCCCCCccc--eee---CCHHHHHHH-HHHHHhcCcccccEEEEee
Q 027620 25 VQGYVGN-KS--AVFPLQLLGYDVDPIHSVQ-FSNHTGYPTFK--GQV---LNGQQLCDL-IEGLEANNLLYYTHLLTGY 94 (221)
Q Consensus 25 ~~G~vG~-d~--~~~~l~~~gi~~~~v~~~~-~~~~~~~~~~~--G~~---l~~~~i~~~-l~~i~~~~~l~~~~v~~G~ 94 (221)
.+|.+|+ |. .++.|+++||+++++.... .+|...+..++ |.. +.+...... .+.+.... ..+.+.++.
T Consensus 66 ~i~~vG~~D~g~i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~~~~~~~~~~~--~~~~v~~~~ 143 (326)
T 3b1n_A 66 MMGTLGAVDAQPYLDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFHPGAMMQSHVNHAGEAK--DIKLAIVGP 143 (326)
T ss_dssp EEEEEETTTCHHHHHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEECGGGGGGGGSCGGGCC--SCSEEEECS
T ss_pred EEEEECCcCHHHHHHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEecChhhhcChhhccccc--CCCEEEECC
Confidence 4677887 53 4567999999999876542 11211111111 110 000000000 01121111 244454432
Q ss_pred cCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCCCCCCHHHH
Q 027620 95 IGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADG 174 (221)
Q Consensus 95 l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~~~~s~~~~ 174 (221)
...+.+.++++.++++ ++++++||+++.. +++. +.+++ +++++|+++||++|++.|+|....+.+
T Consensus 144 ----~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~---~~~~---~~~~~-~l~~~dil~~N~~Ea~~l~g~~~~~~~-- 208 (326)
T 3b1n_A 144 ----DGFQGMVQHTEELAQA--GVPFIFDPGQGLP---LFDG---ATLRR-SIELATYIAVNDYEAKLVCDKTGWSED-- 208 (326)
T ss_dssp ----CCHHHHHHHHHHHHHH--TCCEEECCGGGGG---GCCH---HHHHH-HHHHCSEEEEEHHHHHHHHHHHCCCHH--
T ss_pred ----ccHHHHHHHHHHHHHC--CCEEEEeCchhhh---hccH---HHHHH-HHHhCCEEecCHHHHHHHhCCCCCCHH--
Confidence 1246777888999888 8999999987642 1232 34444 888999999999999999875332222
Q ss_pred HHHHHHHHHcCCCeEEEeeeeeCCcEE
Q 027620 175 REACKILHAAGPAKVVITSINIDGNLF 201 (221)
Q Consensus 175 ~~a~~~L~~~G~~~VvVT~G~~~~~~~ 201 (221)
.+.+. ++.|+||+|+ +|..+
T Consensus 209 -----~l~~~-~~~vvvT~G~-~Ga~~ 228 (326)
T 3b1n_A 209 -----EIASR-VQALIITRGE-HGATI 228 (326)
T ss_dssp -----HHHTT-SSEEEEECGG-GCEEE
T ss_pred -----HHHhc-CCEEEEecCC-CceEE
Confidence 23333 8899999999 77543
No 60
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=98.80 E-value=1.3e-08 Score=85.37 Aligned_cols=96 Identities=14% Similarity=0.089 Sum_probs=64.9
Q ss_pred EEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCC--CceEEecCHHHHHHhcCCC
Q 027620 90 LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP--VASMLTPNQFEAEQLTGFR 167 (221)
Q Consensus 90 v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~--~~dvi~pN~~Ea~~l~g~~ 167 (221)
+..|++ ++...+.+.++++.++++ ++++++||+.... . ....+..++ +++ ++++|+||..|++.|+|.+
T Consensus 64 i~~G~~-~~~~~~~~~~~~~~a~~~--~~pvVlDp~g~~~----~-~~~~~~~~~-ll~~~~~~vitPN~~E~~~L~g~~ 134 (272)
T 1ekq_A 64 LNIGTL-SKESVEAMIIAGKSANEH--GVPVILDPVGAGA----T-PFRTESARD-IIREVRLAAIRGNAAEIAHTVGVT 134 (272)
T ss_dssp EECTTC-CHHHHHHHHHHHHHHHHT--TCCEEEECTTBTT----B-HHHHHHHHH-HHHHSCCSEEEECHHHHHHHCC--
T ss_pred EECCCC-CHHHHHHHHHHHHHHHhc--CCeEEEeCCCcCc----c-cchHHHHHH-HHccCCCeEECCCHHHHHHHhCCC
Confidence 446774 566678888899999888 8999999964321 1 111122223 565 8999999999999999976
Q ss_pred -C--------CCHHHHHHHHHHHHHcCCCeEEEeeee
Q 027620 168 -I--------GSEADGREACKILHAAGPAKVVITSIN 195 (221)
Q Consensus 168 -~--------~s~~~~~~a~~~L~~~G~~~VvVT~G~ 195 (221)
. .+.++..+++++|.+++...|++| |+
T Consensus 135 ~~~~~gvd~~~~~~~~~~aa~~l~~~~~~vVv~~-G~ 170 (272)
T 1ekq_A 135 DWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAIT-GE 170 (272)
T ss_dssp -------------HHHHHHHHHHHHHHTSEEEEC-SS
T ss_pred cccccCccCCCCHHHHHHHHHHHHHHcCCEEEEE-CC
Confidence 4 456778888999887655556666 66
No 61
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=98.79 E-value=2.5e-09 Score=91.58 Aligned_cols=154 Identities=17% Similarity=0.158 Sum_probs=92.9
Q ss_pred CCeEEEEeccCccCccchhhcHHHHHhcCCceeeeeeEEeecCCCCC-ccc----eeeC-CHHHHHHHHHHHHhcCcccc
Q 027620 14 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYP-TFK----GQVL-NGQQLCDLIEGLEANNLLYY 87 (221)
Q Consensus 14 ~~~vl~i~~~~~~G~vG~d~~~~~l~~~gi~~~~v~~~~~~~~~~~~-~~~----G~~l-~~~~i~~~l~~i~~~~~l~~ 87 (221)
.++||.|.|+|.+|..|.-++++.++. |... ++..+.++..+.. ... -..+ ..++++.++ . .+
T Consensus 44 ~G~vlvIaGsd~~~GA~ilA~~aal~~-Gagl--vt~~t~~~~~~~v~~~~pe~~~~~~~~~~ql~~~~---~-----~~ 112 (310)
T 2r3b_A 44 FGRVVLIGGNRQYGGAIIMSTEACINS-GAGL--TTVITDVKNHGPLHARCPEAMVVGFEETVLLTNVV---E-----QA 112 (310)
T ss_dssp GCEEEEECCCSSSHHHHHHHHHHHHHH-TCSE--EEEECCGGGHHHHHHHCTTCEEECTTCHHHHHHHH---H-----HC
T ss_pred CCEEEEEECCCCCCcHHHHHHHHHHHh-CcCc--EEEEEChhhHhHHhhCChhheEecCCcHHHHHHHh---c-----cC
Confidence 467999999999999999998888887 6554 3333323322110 000 0111 123444432 2 24
Q ss_pred cEEEEee-cC-ChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcC--CCceEEecCHHHHHHh
Q 027620 88 THLLTGY-IG-SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVV--PVASMLTPNQFEAEQL 163 (221)
Q Consensus 88 ~~v~~G~-l~-~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll--~~~dvi~pN~~Ea~~l 163 (221)
+++++|+ ++ ++...+.+.++++..+ + +.++|+||. |..++..+. .++ +.+++|+||..|++.|
T Consensus 113 dav~IG~Gl~~~~~~~~~v~~~l~~~~-~--~~pvVlDa~----g~~ll~~~~------~~l~~~~~~viTPN~~E~~~L 179 (310)
T 2r3b_A 113 DVILIGPGLGLDATAQQILKMVLAQHQ-K--QQWLIIDGS----AITLFSQGN------FSLTYPEKVVFTPHQMEWQRL 179 (310)
T ss_dssp SEEEECTTCCSSHHHHHHHHHHHHHCC-T--TCEEEEETH----HHHHHHHTT------CCCSSGGGEEEECCHHHHHHH
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHhcC-C--CCcEEEcCC----cchhcccch------hhhcCCCCEEEcCCHHHHHHH
Confidence 5688886 55 4445667777776554 3 789999993 211111100 123 4789999999999999
Q ss_pred cCCCCCCHH-HH-HHHHHHHHHcCCCeEEEeeee
Q 027620 164 TGFRIGSEA-DG-REACKILHAAGPAKVVITSIN 195 (221)
Q Consensus 164 ~g~~~~s~~-~~-~~a~~~L~~~G~~~VvVT~G~ 195 (221)
+|.++.+.+ +. .++++++ |+ .|++|.+.
T Consensus 180 ~g~~~~~~~~~~a~~aA~~l---g~-~VvlKG~~ 209 (310)
T 2r3b_A 180 SHLPIEQQTLANNQRQQAKL---GS-TIVLKSHR 209 (310)
T ss_dssp HCCCGGGCCHHHHHHHHHHH---TS-EEEECSTT
T ss_pred hCCCCCcccchHHHHHHHHh---Cc-EEEEeCCc
Confidence 998765443 44 7777777 54 45555533
No 62
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=98.75 E-value=1.4e-09 Score=93.20 Aligned_cols=156 Identities=17% Similarity=0.127 Sum_probs=95.5
Q ss_pred CCeEEEEeccCccCccchhhcHHHHHhcCCceeeeeeEEeecCCCCC-ccc----eeeC-CHHHHHHHHHHHHhcCcccc
Q 027620 14 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYP-TFK----GQVL-NGQQLCDLIEGLEANNLLYY 87 (221)
Q Consensus 14 ~~~vl~i~~~~~~G~vG~d~~~~~l~~~gi~~~~v~~~~~~~~~~~~-~~~----G~~l-~~~~i~~~l~~i~~~~~l~~ 87 (221)
.++||.|.|+|.+|..|.-++++.++. |... ++..+.++..+.. ... -..+ ..++++.++ + .+
T Consensus 58 ~G~vlvIaGsd~~~GAgilA~~aal~~-Gagl--vt~~t~q~~~~~v~~~~pe~~~~~~~~~~ql~~~~---~-----~~ 126 (311)
T 3bgk_A 58 FGRVLLIGGNYPYGGAIIMAALACVNS-GAGL--VTVATHKDNITALHSHLPEAMAFDMVEKDRLSEQI---T-----AA 126 (311)
T ss_dssp TCEEEEECCCTTCHHHHHHHHHHHHHT-TCSE--EEEEECGGGHHHHHHHCTTSEEEETTCHHHHHHHH---H-----HC
T ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHh-CcCe--EEEEEChhhHhHHhhCChhHheeccccHHHHHHHh---c-----cC
Confidence 467999999999999999998888886 6554 3333333332210 000 0111 123444432 2 24
Q ss_pred cEEEEee-cC-ChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhc-C-CCceEEecCHHHHHHh
Q 027620 88 THLLTGY-IG-SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKV-V-PVASMLTPNQFEAEQL 163 (221)
Q Consensus 88 ~~v~~G~-l~-~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~l-l-~~~dvi~pN~~Ea~~l 163 (221)
+++++|+ ++ ++...+.+.++++..+ . +.++|+||. |..+...+ ..+ + +.+++|+||..|++.|
T Consensus 127 dav~IG~Gl~~~~~~~~~v~~~l~~~~-~--~~pvVlDa~----g~~ll~~~------~~l~L~~~~~viTPN~~E~~~L 193 (311)
T 3bgk_A 127 DVVLMGPGLAEDDLAQTTFDVVWQAIE-P--KQTLIIDGS----AINLLAKR------KPAIWPTKQIILTPHQKEWERL 193 (311)
T ss_dssp SEEEECTTCCSSHHHHHHHHHHHHHCC-T--TSEEEEETH----HHHHHHHC------C-CCCSCSCEEEECCSCC-CTT
T ss_pred CEEEEcCCCCCCHHHHHHHHHHHHHcC-C--CCeEEEeCC----hhhhhccC------hhhcCCCCCEEECCcHHHHHHH
Confidence 5788887 65 4555677777777654 3 679999993 21111110 012 3 4789999999999999
Q ss_pred cCCCCCCH-HHH-HHHHHHHHHcCCCeEEEeeee
Q 027620 164 TGFRIGSE-ADG-REACKILHAAGPAKVVITSIN 195 (221)
Q Consensus 164 ~g~~~~s~-~~~-~~a~~~L~~~G~~~VvVT~G~ 195 (221)
+|.++.+. ++. .+++++|.+ |+ .|++|.+.
T Consensus 194 ~g~~~~~~~~d~~~~aa~~l~~-g~-~VvlkG~~ 225 (311)
T 3bgk_A 194 SGLTIPEQIEAATQTALAHFPK-ET-ILVAKSHQ 225 (311)
T ss_dssp TCCCSTTCCHHHHHHHHTTSCT-TC-EEEECSSS
T ss_pred hCCCCCcchhhHHHHHHHHHhc-CC-EEEEeCCC
Confidence 99887654 466 778888877 53 45555443
No 63
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=98.52 E-value=7.1e-08 Score=80.70 Aligned_cols=96 Identities=15% Similarity=0.114 Sum_probs=64.4
Q ss_pred EEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCC-CceEEecCHHHHHHhcCCCC
Q 027620 90 LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP-VASMLTPNQFEAEQLTGFRI 168 (221)
Q Consensus 90 v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~-~~dvi~pN~~Ea~~l~g~~~ 168 (221)
+-.|++ ++...+.+..+++.++++ +.++|+||...... -...+.... +++ .+++++||..|++.|+|.+.
T Consensus 62 i~~G~~-~~~~~~~~~~~~~~a~~~--~~pvVlDpv~~~~~--~~~~~~~~~----ll~~~~~vITPN~~E~~~L~g~~~ 132 (265)
T 1v8a_A 62 INIGTL-DSGWRRSMVKATEIANEL--GKPIVLDPVGAGAT--KFRTRVSLE----ILSRGVDVLKGNFGEISALLGEEG 132 (265)
T ss_dssp EECTTC-CHHHHHHHHHHHHHHHHH--TCCEEEECTTBTTB--HHHHHHHHH----HHHHCCSEEEEEHHHHHHHHHHHC
T ss_pred EEECCC-CHHHHHHHHHHHHHHHHc--CCcEEEcCcccccc--ccCHHHHHH----HHHhCCcEEcCCHHHHHHHhCCcc
Confidence 344665 555567777888888888 88999999764220 011122222 332 39999999999999998652
Q ss_pred -----C----CHHHHHHHHHHHHHcCCCeEEEeeee
Q 027620 169 -----G----SEADGREACKILHAAGPAKVVITSIN 195 (221)
Q Consensus 169 -----~----s~~~~~~a~~~L~~~G~~~VvVT~G~ 195 (221)
. +.++..+++++|.+++...|++| |+
T Consensus 133 ~~~gvd~~~~~~~~~~~aa~~la~~~~~~Vvlk-G~ 167 (265)
T 1v8a_A 133 KTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVT-GA 167 (265)
T ss_dssp ----------CHHHHHHHHHHHHHHTTSEEEEE-SS
T ss_pred cccCcCcccccHHHHHHHHHHHHHHhCcEEEEc-CC
Confidence 1 22677888999987766667777 54
No 64
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=98.36 E-value=3.1e-06 Score=71.02 Aligned_cols=99 Identities=17% Similarity=0.099 Sum_probs=68.0
Q ss_pred EEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCCCC
Q 027620 89 HLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRI 168 (221)
Q Consensus 89 ~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~~~ 168 (221)
++..|++ ++...+.+..+++.+++. +.|+|+||+.... .-...+..+.+.+ ..+++|+||..|++.|+|...
T Consensus 63 vIn~G~l-~~~~~~~~~~a~~~a~~~--~~PvVlDPVg~ga--s~~r~~~~~~Ll~---~~~~VItpN~~E~~~L~g~~~ 134 (273)
T 3dzv_A 63 VLNLGHL-SQEREQSLLAASDYARQV--NKLTVVDLVGYGA--SDIRNEVGEKLVH---NQPTVVKGNLSEMRTFCQLVS 134 (273)
T ss_dssp EEECCSC-CHHHHHHHHHHHHHHHHT--TCCEEEECTTTTS--CHHHHHHHHHHHH---TCCSEEEEEHHHHHHHTTCCC
T ss_pred EEecCCC-ChHHHHHHHHHHHHHHHc--CCcEEEchhhcCC--cccCHHHHHHHHh---cCCcEECCCHHHHHHHhCCcc
Confidence 3566886 345567888888888888 8899999976422 0112233333321 378999999999999999764
Q ss_pred C-----C------HH---HHHHHHHHHHHcCC-CeEEEeeee
Q 027620 169 G-----S------EA---DGREACKILHAAGP-AKVVITSIN 195 (221)
Q Consensus 169 ~-----s------~~---~~~~a~~~L~~~G~-~~VvVT~G~ 195 (221)
. + .+ +..+++++|.++.. ..|++|++.
T Consensus 135 ~~~GVds~~~~~~~~~~~d~~~aa~~la~~~~~~~VvlkG~~ 176 (273)
T 3dzv_A 135 HGRGVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATGIQ 176 (273)
T ss_dssp C-------CGGGSHHHHHHHHHHHHHHHHHSTTCEEEEESSS
T ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhCCeEEEEECCe
Confidence 2 1 13 56678888887655 678888754
No 65
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=98.13 E-value=1.5e-05 Score=72.99 Aligned_cols=94 Identities=18% Similarity=0.105 Sum_probs=65.3
Q ss_pred EEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCC--CceEEecCHHHHHHhcCCC
Q 027620 90 LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP--VASMLTPNQFEAEQLTGFR 167 (221)
Q Consensus 90 v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~--~~dvi~pN~~Ea~~l~g~~ 167 (221)
+-+|++.+ .+.+..+++.+++. +.|+|+||+.... . ....+..++ +++ .+++|+||..|+..|+|.+
T Consensus 312 in~G~l~~---~~~~~~a~~~a~~~--~~PvVlDPVg~~a----~-~~r~~~~~~-Ll~~~~~~vItpN~~E~~~L~g~~ 380 (540)
T 3nl6_A 312 LNTGSVAP---PEMLKAAIRAYNDV--KRPIVFDPVGYSA----T-ETRLLLNNK-LLTFGQFSCIKGNSSEILGLAELN 380 (540)
T ss_dssp EESSCSCC---HHHHHHHHHHHHTT--TCCEEEECTTCTT----S-HHHHHHHHH-HTTSCCCSEEEECHHHHHHHTTC-
T ss_pred EeCCCCCH---HHHHHHHHHHHHHc--CCCEEEChHHhhc----c-cccHHHHHH-HHhhCCCeEECCCHHHHHHHhCCC
Confidence 55677654 77888888888888 8899999976422 1 111233333 766 7999999999999999965
Q ss_pred C------C-----CHHHHHHHHHHHHHcCCCeEEEeee
Q 027620 168 I------G-----SEADGREACKILHAAGPAKVVITSI 194 (221)
Q Consensus 168 ~------~-----s~~~~~~a~~~L~~~G~~~VvVT~G 194 (221)
. + +.++..+++++|.++....|++|+.
T Consensus 381 ~~~~~GVds~~~~~~~d~~~aA~~lA~~~~~vVvlkG~ 418 (540)
T 3nl6_A 381 KERMKGVDASSGISNELLIQATKIVAFKYKTVAVCTGE 418 (540)
T ss_dssp -------------CCHHHHHHHHHHHHHTTSEEEECSS
T ss_pred cccccccccccccCHHHHHHHHHHHHHHhCCEEEEcCC
Confidence 3 1 2366778888888765556777653
No 66
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=98.02 E-value=2.5e-07 Score=78.56 Aligned_cols=139 Identities=13% Similarity=0.091 Sum_probs=76.0
Q ss_pred ccCccchhh---cHHHHHhcCCceeeeeeE-EeecCCCCCccc-eee--C-CHHHHHHHH-HHHHhcCcccccEEEEeec
Q 027620 25 VQGYVGNKS---AVFPLQLLGYDVDPIHSV-QFSNHTGYPTFK-GQV--L-NGQQLCDLI-EGLEANNLLYYTHLLTGYI 95 (221)
Q Consensus 25 ~~G~vG~d~---~~~~l~~~gi~~~~v~~~-~~~~~~~~~~~~-G~~--l-~~~~i~~~l-~~i~~~~~l~~~~v~~G~l 95 (221)
.+|.+|+|. .++.|+++||+++++... ..+|...+..+. |+. + ... ....+ +.+. -..+.+.++..
T Consensus 75 ~i~~vG~D~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~g~r~~~~~~g-a~~~~~~~l~----~~~~~v~~~~~ 149 (306)
T 3bf5_A 75 LYSAVGMKTHREYLAMIESMGINTGHVEKFEDESGPICYIATDGKKQVSFMHQG-AMAAWAPQLA----DEYEYVHFSTG 149 (306)
T ss_dssp EEEEEETTTCHHHHHHHHHTTCCCTTEEEETTCCCSEEEEEECSSCEEEEEECT-HHHHCCCCCC----SCEEEEEECSS
T ss_pred EEEEEeCChHHHHHHHHHHcCCCchheEecCCCCCceEEEEEcCCeeEEEEeCC-hhhhhhHhhc----CCCCEEEECCh
Confidence 477888774 456799999999887544 222222222111 210 0 000 00100 1121 12455555432
Q ss_pred CChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCCCCCCHHHHH
Q 027620 96 GSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGR 175 (221)
Q Consensus 96 ~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~~~~s~~~~~ 175 (221)
. .+.++++.++ . ++++||+++.. ... .+.+++ +++++|+++||++|++.|+|....+..
T Consensus 150 ~------~~~~~~~~a~----~-~v~~D~~~~~~---~~~---~~~~~~-~l~~~dil~~N~~E~~~l~g~~~~~~~--- 208 (306)
T 3bf5_A 150 P------NYLDMAKSIR----S-KIIFDPSQEIH---KYS---KDELKK-FHEISYMSIFNDHEYRVFREMTGLSSP--- 208 (306)
T ss_dssp S------SHHHHHHHCC----S-EEEECCGGGGG---GSC---HHHHHH-HHHHCSEEEEEHHHHHHHHHHHCCSSC---
T ss_pred H------HHHHHHHHhC----C-cEEEcCchhhh---hcc---HHHHHH-HHhcCCEEEcCHHHHHHHhCCCCcCcc---
Confidence 2 4455666553 3 89999975321 011 234554 788999999999999999875322111
Q ss_pred HHHHHHHHcCCCeEEEeeeeeCCcE
Q 027620 176 EACKILHAAGPAKVVITSINIDGNL 200 (221)
Q Consensus 176 ~a~~~L~~~G~~~VvVT~G~~~~~~ 200 (221)
.+ .|+||+|+ +|..
T Consensus 209 ----~l------~vvvT~G~-~Ga~ 222 (306)
T 3bf5_A 209 ----KV------TTIVTNGE-RGSS 222 (306)
T ss_dssp ----SS------CEEEEEGG-GEEE
T ss_pred ----cE------EEEEeecc-cCeE
Confidence 11 19999998 6643
No 67
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=97.72 E-value=8.2e-05 Score=61.99 Aligned_cols=96 Identities=17% Similarity=0.098 Sum_probs=62.2
Q ss_pred EEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCCCC-
Q 027620 90 LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRI- 168 (221)
Q Consensus 90 v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~~~- 168 (221)
+-+|.+ ++...+....+.+.+.+. +.|+||||+-... . +-..+..++.+-.++++|+||..|...|.|...
T Consensus 62 iNiGtl-~~~~~~~m~~A~~~A~~~--~~PvVLDPVg~ga----s-~~R~~~~~~ll~~~~~vIrgN~sEi~~L~g~~~~ 133 (265)
T 3hpd_A 62 INIGTL-DSGWRRSMVKATEIANEL--GKPIVLDPVGAGA----T-KFRTRVSLEILSRGVDVLKGNFGEISALLGEEGK 133 (265)
T ss_dssp EECTTC-CHHHHHHHHHHHHHHHHH--TCCEEEECTTBTT----B-HHHHHHHHHHHHHCCSEEEEEHHHHHHHHHHHC-
T ss_pred EECCCC-ChHHHHHHHHHHHHHHHc--CCCEEEcCCCCCC----c-HHHHHHHHHHHhcCCcEEcCCHHHHHHHhcccCC
Confidence 445655 455567777888888888 9999999975321 1 111122232123478999999999999987431
Q ss_pred --------CCHHHHHHHHHHHHHcCCCeEEEee
Q 027620 169 --------GSEADGREACKILHAAGPAKVVITS 193 (221)
Q Consensus 169 --------~s~~~~~~a~~~L~~~G~~~VvVT~ 193 (221)
.+.++..++++.+.++.-..|++|+
T Consensus 134 ~~gvds~~~~~~d~~~~a~~lA~~~~~vVvlkG 166 (265)
T 3hpd_A 134 TRGVDSLEYGEEEAKKLTMNAAREFNTTVAVTG 166 (265)
T ss_dssp ---------CHHHHHHHHHHHHHHTTSEEEEES
T ss_pred CCCccCccccHHHHHHHHHHHHHHhCCEEEEeC
Confidence 2356777888888755333555654
No 68
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=97.62 E-value=6.4e-05 Score=68.17 Aligned_cols=107 Identities=19% Similarity=0.197 Sum_probs=61.3
Q ss_pred CCHHHHHHHHHHHHhcCcccccEEEEee-cCChhHHHHHHHHHH-HHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHH
Q 027620 67 LNGQQLCDLIEGLEANNLLYYTHLLTGY-IGSVSFLNTILQVVE-KLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYRE 144 (221)
Q Consensus 67 l~~~~i~~~l~~i~~~~~l~~~~v~~G~-l~~~~~~~~i~~~i~-~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~ 144 (221)
+++++++++.+.+.. ++++.+|. ++... ...++++ .+++. +.++|+||.... ++.+ +.++
T Consensus 306 ~~~~~~~~~~~~~~~-----~davviGpGlg~~~---~~~~~~~~~l~~~--~~pvVlDadgl~----~l~~---~ll~- 367 (502)
T 3rss_A 306 FSLQNLQECLELSKD-----VDVVAIGPGLGNNE---HVREFVNEFLKTL--EKPAVIDADAIN----VLDT---SVLK- 367 (502)
T ss_dssp CCGGGHHHHHHHHTT-----CSEEEECTTCCCSH---HHHHHHHHHHHHC--CSCEEECHHHHH----TCCH---HHHH-
T ss_pred cchhhHHHHHHHhcc-----CCEEEEeCCCCCCH---HHHHHHHHHHHhc--CCCEEEeCcccc----hhcH---HHHh-
Confidence 444566666555543 45677764 22222 2222233 34555 789999995322 1221 1221
Q ss_pred hcCCCceEEecCHHHHHHhcCCCCCCH-HHHHHHHHHHHHcCCCeEEEee
Q 027620 145 KVVPVASMLTPNQFEAEQLTGFRIGSE-ADGREACKILHAAGPAKVVITS 193 (221)
Q Consensus 145 ~ll~~~dvi~pN~~Ea~~l~g~~~~s~-~~~~~a~~~L~~~G~~~VvVT~ 193 (221)
..+.+++++||..|++.|+|.++.+. ++ .++++++.+++...|++|.
T Consensus 368 -~~~~~~vlTPN~~E~~~L~g~~~~~~~~d-~~aa~~la~~~~~~VvlKG 415 (502)
T 3rss_A 368 -ERKSPAVLTPHPGEMARLVKKTVGDVKYN-YELAEEFAKENDCVLVLKS 415 (502)
T ss_dssp -HCSSCEEECCCHHHHHHHHTCCHHHHTTC-HHHHHHHHHHHTSEEEECS
T ss_pred -ccCCCEEEeCCHHHHHHHhCCCccchHHH-HHHHHHHHHHcCCEEEEeC
Confidence 34578999999999999999865322 34 6677777755433444443
No 69
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=97.45 E-value=0.00018 Score=60.43 Aligned_cols=91 Identities=18% Similarity=0.133 Sum_probs=57.7
Q ss_pred ccEEEEeecCChhH-HHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcC
Q 027620 87 YTHLLTGYIGSVSF-LNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (221)
Q Consensus 87 ~~~v~~G~l~~~~~-~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g 165 (221)
+|++.+|. +.. .+...++++.+.++ +.++|+|+. +..+ .. + ......++++||..|++.|+|
T Consensus 99 ~davviGP---Glg~~~~~~~~~~~~l~~--~~p~VlDAd----al~~-~~-----l--~~~~~~~vlTPN~~E~~~L~g 161 (279)
T 3rpz_A 99 YRAIAIGP---GLPQTESVQQAVDHVLTA--DCPVILDAG----ALAK-RT-----Y--PKREGPVILTPHPGEFFRMTG 161 (279)
T ss_dssp CSEEEECT---TCCCCHHHHHHHHHHTTS--SSCEEECGG----GCCS-CC-----C--CCCSSCEEECCCHHHHHHHHC
T ss_pred CCEEEECC---CCCCCHHHHHHHHHHHhh--CCCEEEECC----ccch-hh-----h--hhccCCEEEecCHHHHHHHhC
Confidence 67777762 322 23445667777666 779999983 2111 00 0 013578999999999999999
Q ss_pred CCCCCH-HHHHHHHHHHHHcCCCeEEEeee
Q 027620 166 FRIGSE-ADGREACKILHAAGPAKVVITSI 194 (221)
Q Consensus 166 ~~~~s~-~~~~~a~~~L~~~G~~~VvVT~G 194 (221)
.++.+. ++..+++++|.+++...|++|.+
T Consensus 162 ~~~~~~~~d~~~aa~~la~~~~~~VvlKG~ 191 (279)
T 3rpz_A 162 VPVNELQKKRAEYAKEWAAQLQTVIVLKGN 191 (279)
T ss_dssp CCHHHHTTSHHHHHHHHHHHHTSEEEECST
T ss_pred CCccchHHHHHHHHHHHHHHcCeEEEEeCC
Confidence 875432 45667788887654335565554
No 70
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=91.04 E-value=0.088 Score=47.21 Aligned_cols=50 Identities=14% Similarity=0.129 Sum_probs=35.0
Q ss_pred cCCCceEEecCHHHHHHhcCC-----CCCC-HHHHHHHHHHHHHcC-CCeEEEeeee
Q 027620 146 VVPVASMLTPNQFEAEQLTGF-----RIGS-EADGREACKILHAAG-PAKVVITSIN 195 (221)
Q Consensus 146 ll~~~dvi~pN~~Ea~~l~g~-----~~~s-~~~~~~a~~~L~~~G-~~~VvVT~G~ 195 (221)
+++...+++||..|++.|+|. +..+ .++..++++++.++. ...|++|.+.
T Consensus 333 ~~~~~~VlTPh~~E~~rL~g~~~~~v~~~~~~~d~~~aa~~la~~~g~~~VvlKG~~ 389 (475)
T 3k5w_A 333 ALEKEAVLTPHPKEFLSLLNLVGINISMLELLDNKLEIARDFSQKYPKVVLLLKGAN 389 (475)
T ss_dssp TTTSSEEEECCHHHHHHHHHHTSCCCCTTSGGGSCC--CHHHHHHCTTEEEEECSSS
T ss_pred ccCCCEEECCCHHHHHHHhCCccCCCCcchhHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 456679999999999999976 4433 245567788887665 5567777765
No 71
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=82.22 E-value=9.7 Score=33.74 Aligned_cols=71 Identities=10% Similarity=0.014 Sum_probs=50.7
Q ss_pred CCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCC--------C-----CCCHHHHHHHHHHHH
Q 027620 116 PNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGF--------R-----IGSEADGREACKILH 182 (221)
Q Consensus 116 ~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~--------~-----~~s~~~~~~a~~~L~ 182 (221)
|+.++-|+... +.+.+.+..+. .+++++|.+-.|+.|+..+.+. . ..+..++.+++..|+
T Consensus 259 ~~~~iH~ElAs------~~~~~~~~~i~-~ilp~vDSlGmNE~EL~~l~~~lg~~~~~~~~~~~~~~~v~~~~~~~~~l~ 331 (455)
T 1ua4_A 259 REIPVHLEFAF------TPDEKVREEIL-NVLGMFYSVGLNEVELASIMEILGEKKLAKELLAHDPVDPIAVTEAMLKLA 331 (455)
T ss_dssp TTCCEEEECCC------CCCHHHHHHHH-HHGGGCSEEEECHHHHHHHHHHTTCHHHHHHTTSSSSCCHHHHHHHHHHHH
T ss_pred CCceEEEEeCC------ccCHHHHHHHH-hhhccCcccccCHHHHHHHHHHhCCCccccccccCCccCHHHHHHHHHHHH
Confidence 48899999743 24566667777 5999999999999999877432 1 122677777777776
Q ss_pred -HcCCCeEEEee
Q 027620 183 -AAGPAKVVITS 193 (221)
Q Consensus 183 -~~G~~~VvVT~ 193 (221)
+.+.+.|.+..
T Consensus 332 ~~~~l~rihvHT 343 (455)
T 1ua4_A 332 KKTGVKRIHFHT 343 (455)
T ss_dssp HHHCCSEEEEEC
T ss_pred HHcCCCEEEEeC
Confidence 55877777643
No 72
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=82.22 E-value=4.6 Score=36.00 Aligned_cols=112 Identities=9% Similarity=0.128 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHhcCccccc-EEEEeecCChh----------HHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhH
Q 027620 70 QQLCDLIEGLEANNLLYYT-HLLTGYIGSVS----------FLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSEL 138 (221)
Q Consensus 70 ~~i~~~l~~i~~~~~l~~~-~v~~G~l~~~~----------~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~ 138 (221)
+++.+.++.+.. .+| +|++|+..-.. ..+...+.++.++.. +.+|-|.-.. +.+.+.
T Consensus 224 e~f~~~l~e~~~----~~d~~vLSGlq~m~~~y~dg~~~~~~l~~~~e~i~~l~~~--~~~iH~E~As------~~~~~l 291 (474)
T 3drw_A 224 EDIKPFLGEIGK----EVDGAIFSGYQGLRTKYSDGKDANYYLRRAKEDIIEFKEK--DVKIHVEFAS------VQDRKL 291 (474)
T ss_dssp TTTGGGHHHHHH----HCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHHT--TCEEEEECCC------CSCHHH
T ss_pred HHHHHHHHHhhc----CCCEEEEeccccccccccccccHHHHHHHHHHHHHHhcCC--CCeEEEEeCc------cccHHH
Confidence 444544444432 244 46777653211 123334555566544 8899888642 245777
Q ss_pred HHHHHHhcCCCceEEecCHHHHHHhcCC-----------CCCCHHHHHHHHHHHH-HcCCCeEEEee
Q 027620 139 VSVYREKVVPVASMLTPNQFEAEQLTGF-----------RIGSEADGREACKILH-AAGPAKVVITS 193 (221)
Q Consensus 139 ~~~l~~~ll~~~dvi~pN~~Ea~~l~g~-----------~~~s~~~~~~a~~~L~-~~G~~~VvVT~ 193 (221)
+..+.+.+++.+|.+=.|+.|+..+.+. .....+++.++++.|+ +.+.+.|.|..
T Consensus 292 ~~~i~~~i~p~vDSlGmNEqELa~l~~~lg~~~~s~~~~~~~~i~~v~e~~~~ll~~~~l~rIhvHT 358 (474)
T 3drw_A 292 RKKIITNILPFVDSVGIDEAEIAQILSVLGYRELADRIFTYNRLEDSILGGMIILDELNFEILQVHT 358 (474)
T ss_dssp HHHHHHHTGGGSSEEEEEHHHHHHHHHHHTCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCSEEEEEC
T ss_pred HHHHHHHhcccccccccCHHHHHHHHHHhcCCccchhhhcCCCHHHHHHHHHHHHHHcCCCEEEEEe
Confidence 7777767999999999999999988653 1224567777777776 56888777743
No 73
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=81.43 E-value=6.8 Score=34.85 Aligned_cols=100 Identities=12% Similarity=0.127 Sum_probs=62.9
Q ss_pred cc-EEEEeecC--C----hh-HHHHHHHHHHHHHh-cCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCH
Q 027620 87 YT-HLLTGYIG--S----VS-FLNTILQVVEKLRS-INPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQ 157 (221)
Q Consensus 87 ~~-~v~~G~l~--~----~~-~~~~i~~~i~~ak~-~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~ 157 (221)
+| ++++|+.. . +. ..+.+.++.+.++. .+++.++-|.-.. +.+.+.+..+. .+++++|-+-.|+
T Consensus 234 ~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l~~l~~~~~~iH~E~As------~~~~~l~~~i~-~ilp~vDSlGmNE 306 (467)
T 1gc5_A 234 VELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNILNRYNVKSHFEFAY------TANRRVREALV-ELLPKFTSVGLNE 306 (467)
T ss_dssp CSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHHTTCEEEEECCC------CCCHHHHHHHH-HHGGGCSEEEECH
T ss_pred CCEEEEechhcccCccCCchhHHHHHHHHHHHHHhhcCCCCeEEEEECC------cccHHHHHHHH-hhccccccCccCH
Confidence 56 46777643 2 12 33444545544444 4458888888642 24577777777 6999999999999
Q ss_pred HHHHHh---cCCCC-------CCHHHHHHHHHHHH-HcCCCeEEEee
Q 027620 158 FEAEQL---TGFRI-------GSEADGREACKILH-AAGPAKVVITS 193 (221)
Q Consensus 158 ~Ea~~l---~g~~~-------~s~~~~~~a~~~L~-~~G~~~VvVT~ 193 (221)
.|+..+ .|.+. .+..++.+++..|+ +.+.+.|.+..
T Consensus 307 qELa~l~~~lg~~~l~~~i~~p~v~~v~~~~~~ll~~~~l~rIhvHT 353 (467)
T 1gc5_A 307 VELASIMEIIGDEELAKEVLEGHIFSVIDAMNVLMDETGIERIHFHT 353 (467)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTCHHHHHHHHHHHHHHHCCSEEEEEE
T ss_pred HHHHHHHHHcCCCcccccccCCCHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 999843 34320 11556666676665 55777776643
No 74
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=80.64 E-value=30 Score=30.61 Aligned_cols=111 Identities=9% Similarity=0.035 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHhcCccccc-EEEEeecCChh-----HHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHH
Q 027620 70 QQLCDLIEGLEANNLLYYT-HLLTGYIGSVS-----FLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYR 143 (221)
Q Consensus 70 ~~i~~~l~~i~~~~~l~~~-~v~~G~l~~~~-----~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~ 143 (221)
+++.+.++.+.. .+| ++++|+..-.. ..+...+-++.++. ++.++-+.-.. +.+.+.+..+.
T Consensus 216 e~f~~~l~e~~~----~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~--~~~~iH~E~As------~~~~~l~~~i~ 283 (457)
T 1l2l_A 216 EEWIERFEEIAK----RSELAIISGLHPLTQENHGKPIKLVREHLKILND--LGIRAHLEFAF------TPDEVVRLEIV 283 (457)
T ss_dssp HHHHHSHHHHHT----TCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHH--TTCEEEEECCC------CSSHHHHHHHH
T ss_pred HHHHHHHHhhcc----CCCEEEEeccccccccchhhhHHHHHHHHHHhcC--CCCeEEEEECC------cccHHHHHHHH
Confidence 455554444321 356 57888854222 12222233333443 48888888632 24577777777
Q ss_pred HhcCCCceEEecCHHHHHHh---cCCC----------CCCHHHHHHHHHHHH-HcCCCeEEEee
Q 027620 144 EKVVPVASMLTPNQFEAEQL---TGFR----------IGSEADGREACKILH-AAGPAKVVITS 193 (221)
Q Consensus 144 ~~ll~~~dvi~pN~~Ea~~l---~g~~----------~~s~~~~~~a~~~L~-~~G~~~VvVT~ 193 (221)
.+++++|-+-.|+.|+..+ .|.+ ..+..++.+++..|+ +.|.+.|.+..
T Consensus 284 -~ilp~vDSlGmNEqELa~l~~~lg~~~l~~~i~~~~~~~v~~v~~~~~~ll~~~~l~rIhvHT 346 (457)
T 1l2l_A 284 -KLLKHFYSVGLNEVELASVVSVMGEKELAERIISKDPADPIAVIEGLLKLIKETGVKRIHFHT 346 (457)
T ss_dssp -HHGGGCSEEEECHHHHHHHHHHTTCHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSEEEEEE
T ss_pred -hhccccccCccCHHHHHHHHHHcCCcccccccccCCccCHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 5999999999999999874 3411 122566667776666 56877776643
No 75
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=71.40 E-value=34 Score=29.52 Aligned_cols=110 Identities=11% Similarity=0.066 Sum_probs=67.7
Q ss_pred CHHHHHHHHHHHHhcCcccccEEEEeecC--------ChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHH
Q 027620 68 NGQQLCDLIEGLEANNLLYYTHLLTGYIG--------SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELV 139 (221)
Q Consensus 68 ~~~~i~~~l~~i~~~~~l~~~~v~~G~l~--------~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~ 139 (221)
+.+...+..+.++.. .+++++.|..- .+...+-+..+.+.+++. |++++-+| +++...
T Consensus 154 s~e~a~~~a~~~k~a---Ga~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~--Gl~~~te~---------~d~~~~ 219 (385)
T 3nvt_A 154 SYEQVAAVAESIKAK---GLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEY--GLGVISEI---------VTPADI 219 (385)
T ss_dssp CHHHHHHHHHHHHHT---TCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEEC---------CSGGGH
T ss_pred CHHHHHHHHHHHHHc---CCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHc--CCEEEEec---------CCHHHH
Confidence 344555555555544 35667665421 123346666677777888 99999998 333333
Q ss_pred HHHHHhcCCCceEEecCHHHHHH------h--cCCCC-------CCHHHHHHHHHHHHHcCCCeEEEe-eee
Q 027620 140 SVYREKVVPVASMLTPNQFEAEQ------L--TGFRI-------GSEADGREACKILHAAGPAKVVIT-SIN 195 (221)
Q Consensus 140 ~~l~~~ll~~~dvi~pN~~Ea~~------l--~g~~~-------~s~~~~~~a~~~L~~~G~~~VvVT-~G~ 195 (221)
+. +.+.+|+++..-.+... + +|.++ .+.+++..+++++.+.|.+.+++. +|.
T Consensus 220 ~~----l~~~vd~lkIgs~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~ 287 (385)
T 3nvt_A 220 EV----ALDYVDVIQIGARNMQNFELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGI 287 (385)
T ss_dssp HH----HTTTCSEEEECGGGTTCHHHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCB
T ss_pred HH----HHhhCCEEEECcccccCHHHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 43 44568888876655322 2 34432 578999999999999888766554 454
No 76
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=68.25 E-value=40 Score=26.83 Aligned_cols=56 Identities=20% Similarity=0.110 Sum_probs=40.3
Q ss_pred CCHHHHHHHHHHHHhcCcccccEEEEeecCChh--HHHHHHHHHHHHHhcCCCCeEEEcccc
Q 027620 67 LNGQQLCDLIEGLEANNLLYYTHLLTGYIGSVS--FLNTILQVVEKLRSINPNLIYVCDPVM 126 (221)
Q Consensus 67 l~~~~i~~~l~~i~~~~~l~~~~v~~G~l~~~~--~~~~i~~~i~~ak~~~~~~~vvlDp~~ 126 (221)
.+.++++...+++.....+..+++..|.|...- ..+...++++.++ +.++.|.-..
T Consensus 70 Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~----~~~vTFHRAF 127 (224)
T 2bdq_A 70 YNDLELRIMEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQ----GLPLVFHMAF 127 (224)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHT----TCCEEECGGG
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhC----CCeEEEECch
Confidence 467788888888776655568889999996333 3678888888775 4578777543
No 77
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=66.10 E-value=24 Score=28.75 Aligned_cols=57 Identities=11% Similarity=0.180 Sum_probs=41.6
Q ss_pred eCCHHHHHHHHHHHHhcCcccccEEEEeecCChh--HHHHHHHHHHHHHhcCCCCeEEEcccc
Q 027620 66 VLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSVS--FLNTILQVVEKLRSINPNLIYVCDPVM 126 (221)
Q Consensus 66 ~l~~~~i~~~l~~i~~~~~l~~~~v~~G~l~~~~--~~~~i~~~i~~ak~~~~~~~vvlDp~~ 126 (221)
..+.++++...+++.....+.++++..|.|...- ..+...++++.++ +.++.|.-..
T Consensus 66 ~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~----~~~vTFHRAf 124 (256)
T 1twd_A 66 CYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAG----PLAVTFHRAF 124 (256)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHT----TSEEEECGGG
T ss_pred cCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhC----CCcEEEECch
Confidence 3567888888888876665568889999996332 3678888888775 5678887654
No 78
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=59.11 E-value=94 Score=27.34 Aligned_cols=118 Identities=11% Similarity=0.057 Sum_probs=63.6
Q ss_pred eCCHHHHHHHHHHHHhcC------cccccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHH
Q 027620 66 VLNGQQLCDLIEGLEANN------LLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELV 139 (221)
Q Consensus 66 ~l~~~~i~~~l~~i~~~~------~l~~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~ 139 (221)
.++.+++++.++.++... .+..|.+.+-.. +.. .+.+..+++.+++. .++|+++|. .+++..
T Consensus 101 ~~~e~~~~~~~~~~~~~~~~rvg~~~~~D~ial~~~-s~d-pe~~~~vVk~V~e~-~dvPL~IDS---------~dpevl 168 (446)
T 4djd_C 101 NLSSEELKAKVEAINGLNFDRVGQHYTIQAIAIRHD-ADD-PAAFKAAVASVAAA-TQLNLVLMA---------DDPDVL 168 (446)
T ss_dssp TSCHHHHHHHHHHHTTCCEEETTEEECCCEEEEECC-SSS-THHHHHHHHHHHTT-CCSEEEEEC---------SCHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHhccCcEEEEEeC-CCC-HHHHHHHHHHHHHh-CCCCEEEec---------CCHHHH
Confidence 345667777777775432 123454433332 222 35566777777663 478899996 234444
Q ss_pred HHHHHhcC-CCceEEecCHHHHHHh------cCCCC----CCHHHHHHHHHHHHHcCCCeEEEeeee
Q 027620 140 SVYREKVV-PVASMLTPNQFEAEQL------TGFRI----GSEADGREACKILHAAGPAKVVITSIN 195 (221)
Q Consensus 140 ~~l~~~ll-~~~dvi~pN~~Ea~~l------~g~~~----~s~~~~~~a~~~L~~~G~~~VvVT~G~ 195 (221)
++-.+..- ..+++.-.+++-.+.+ .+.++ ...+.+.+....+.+.|.+.+++=-|.
T Consensus 169 eaALea~a~~~plI~sat~dn~e~m~~lAa~y~~pVi~~~~dl~~lkelv~~a~~~GI~~IvLDPG~ 235 (446)
T 4djd_C 169 KEALAGVADRKPLLYAATGANYEAMTALAKENNCPLAVYGNGLEELAELVDKIVALGHKQLVLDPGA 235 (446)
T ss_dssp HHHHGGGGGGCCEEEEECTTTHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHTTCCCEEEECCC
T ss_pred HHHHHhhcCcCCeeEecchhhHHHHHHHHHHcCCcEEEEeccHHHHHHHHHHHHHCCCCcEEECCCc
Confidence 43333111 2345554443332222 23221 245677788888888999888775443
No 79
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=58.68 E-value=71 Score=25.79 Aligned_cols=108 Identities=13% Similarity=0.107 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHhcCcccccEEEEeecCChh--------HHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHH
Q 027620 69 GQQLCDLIEGLEANNLLYYTHLLTGYIGSVS--------FLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVS 140 (221)
Q Consensus 69 ~~~i~~~l~~i~~~~~l~~~~v~~G~l~~~~--------~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~ 140 (221)
.+...++.+.++.. .+++|+.++.-... ..+-+..+.+.+++. |++++-+| +++...+
T Consensus 36 ~e~a~~~a~~l~~~---Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~--Gl~~~te~---------~d~~~~~ 101 (262)
T 1zco_A 36 REQIMKVAEFLAEV---GIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEY--GLVTVTEV---------MDTRHVE 101 (262)
T ss_dssp HHHHHHHHHHHHHT---TCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEEC---------CCGGGHH
T ss_pred HHHHHHHHHHHHHc---CCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHc--CCcEEEee---------CCHHhHH
Confidence 34445555555544 35667766542111 145556666777788 99999888 3344344
Q ss_pred HHHHhcCCCceEEecCHHHHHHh--------cCCCC------C-CHHHHHHHHHHHHHcCCCeEEE-eee
Q 027620 141 VYREKVVPVASMLTPNQFEAEQL--------TGFRI------G-SEADGREACKILHAAGPAKVVI-TSI 194 (221)
Q Consensus 141 ~l~~~ll~~~dvi~pN~~Ea~~l--------~g~~~------~-s~~~~~~a~~~L~~~G~~~VvV-T~G 194 (221)
.+.+ .+|+++....+.... +|.++ . +.+++..++..+...|.+.+++ -+|
T Consensus 102 ~l~~----~vd~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG 167 (262)
T 1zco_A 102 LVAK----YSDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERG 167 (262)
T ss_dssp HHHH----HCSEEEECGGGTTCHHHHHHHTTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECC
T ss_pred HHHh----hCCEEEECcccccCHHHHHHHHhcCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 4433 378887766554332 34442 2 6899999999999888766654 445
No 80
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=54.58 E-value=99 Score=26.21 Aligned_cols=80 Identities=9% Similarity=0.070 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHH------Hh--cCCCC----
Q 027620 101 LNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAE------QL--TGFRI---- 168 (221)
Q Consensus 101 ~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~------~l--~g~~~---- 168 (221)
.+-+..+.+.+++. |.+++-+| +++...+.+.+ .+|+++.-..+.. .+ ++.++
T Consensus 156 ~egl~~l~~~~~e~--Gl~~~te~---------~d~~~~~~l~~----~vd~lkIgAr~~~n~~LL~~va~~~kPVilk~ 220 (350)
T 1vr6_A 156 EKGLEYLREAADKY--GMYVVTEA---------LGEDDLPKVAE----YADIIQIGARNAQNFRLLSKAGSYNKPVLLKR 220 (350)
T ss_dssp HHHHHHHHHHHHHH--TCEEEEEC---------SSGGGHHHHHH----HCSEEEECGGGTTCHHHHHHHHTTCSCEEEEC
T ss_pred HHHHHHHHHHHHHc--CCcEEEEe---------CCHHHHHHHHH----hCCEEEECcccccCHHHHHHHHccCCcEEEcC
Confidence 35556666667788 99998887 34444444433 3677765444432 22 34442
Q ss_pred ---CCHHHHHHHHHHHHHcCCCeEEEe-eee
Q 027620 169 ---GSEADGREACKILHAAGPAKVVIT-SIN 195 (221)
Q Consensus 169 ---~s~~~~~~a~~~L~~~G~~~VvVT-~G~ 195 (221)
.+.+++..+++++...|.+.+++. +|.
T Consensus 221 G~~~tl~ei~~Ave~i~~~GN~~viLceRG~ 251 (350)
T 1vr6_A 221 GFMNTIEEFLLSAEYIANSGNTKIILCERGI 251 (350)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred CCCCCHHHHHHHHHHHHHCCCCeEEEEeCCC
Confidence 277899999999999998788775 443
No 81
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=53.18 E-value=68 Score=26.48 Aligned_cols=86 Identities=17% Similarity=0.162 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHhcCCCCeEEEcccccCCC--CCCCc-hhHHHHHHHhcCC-CceEEecCHHHHHHhcCCCCCCHHHHHH
Q 027620 101 LNTILQVVEKLRSINPNLIYVCDPVMGDEG--KLYVP-SELVSVYREKVVP-VASMLTPNQFEAEQLTGFRIGSEADGRE 176 (221)
Q Consensus 101 ~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g--~~~~~-~~~~~~l~~~ll~-~~dvi~pN~~Ea~~l~g~~~~s~~~~~~ 176 (221)
.+.+.++.+.+++. |.++++++.++... ....+ +...++.+. ... .+|+++.....-. ++ +.+++.+
T Consensus 141 ~~~i~~v~~~~~~~--G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~-a~~lGaD~iKv~~~~~~--~g----~~~~~~~ 211 (304)
T 1to3_A 141 LNMVKEFNELCHSN--GLLSIIEPVVRPPRCGDKFDREQAIIDAAKE-LGDSGADLYKVEMPLYG--KG----ARSDLLT 211 (304)
T ss_dssp HHHHHHHHHHHHTT--TCEEEEEEEECCCSSCSCCCHHHHHHHHHHH-HTTSSCSEEEECCGGGG--CS----CHHHHHH
T ss_pred HHHHHHHHHHHHHc--CCcEEEEEECCCCccccCCChhHHHHHHHHH-HHHcCCCEEEeCCCcCC--CC----CHHHHHH
Confidence 56778888999998 99999998654221 00111 222333554 333 7899987653110 11 3345555
Q ss_pred HHHHHHHc-CCCeEEEeeee
Q 027620 177 ACKILHAA-GPAKVVITSIN 195 (221)
Q Consensus 177 a~~~L~~~-G~~~VvVT~G~ 195 (221)
.++.+-.. +.+.|++..|.
T Consensus 212 vv~~~~~~~~~P~Vv~aGG~ 231 (304)
T 1to3_A 212 ASQRLNGHINMPWVILSSGV 231 (304)
T ss_dssp HHHHHHHTCCSCEEECCTTS
T ss_pred HHHhccccCCCCeEEEecCC
Confidence 55544332 33446666665
No 82
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=40.73 E-value=1.5e+02 Score=24.36 Aligned_cols=58 Identities=9% Similarity=0.043 Sum_probs=43.6
Q ss_pred eCCHHHHHHHHHHHHhcCcccccEEEEeecCCh--hHHHHHHHHHHHHHhcCCCCeEEEccccc
Q 027620 66 VLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSV--SFLNTILQVVEKLRSINPNLIYVCDPVMG 127 (221)
Q Consensus 66 ~l~~~~i~~~l~~i~~~~~l~~~~v~~G~l~~~--~~~~~i~~~i~~ak~~~~~~~vvlDp~~~ 127 (221)
..+.++++...+++.....+..|+|..|.|-.+ ...+...++++.++ +..+.|.+...
T Consensus 104 ~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~----~l~vTFHRAFD 163 (287)
T 3iwp_A 104 LYSDREIEVMKADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICR----PLPVTFHRAFD 163 (287)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHT----TSCEEECGGGG
T ss_pred ccCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcC----CCcEEEECchh
Confidence 457788888888887665556888999988655 45778888888775 46799998654
No 83
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=39.95 E-value=1.2e+02 Score=24.66 Aligned_cols=79 Identities=14% Similarity=0.094 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHH------h--cCCCC-----
Q 027620 102 NTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQ------L--TGFRI----- 168 (221)
Q Consensus 102 ~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~------l--~g~~~----- 168 (221)
+-+..+.+.+++. |++++-+| +++...+.+.+ .+|+++.-..+... + +|.++
T Consensus 89 ~gl~~l~~~~~~~--Gl~~~te~---------~d~~~~~~l~~----~vd~~kIgs~~~~n~~ll~~~a~~~kPV~lk~G 153 (276)
T 1vs1_A 89 EGLKLLRRAGDEA--GLPVVTEV---------LDPRHVETVSR----YADMLQIGARNMQNFPLLREVGRSGKPVLLKRG 153 (276)
T ss_dssp HHHHHHHHHHHHH--TCCEEEEC---------CCGGGHHHHHH----HCSEEEECGGGTTCHHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHHHc--CCcEEEec---------CCHHHHHHHHH----hCCeEEECcccccCHHHHHHHHccCCeEEEcCC
Confidence 3344445556666 88887776 33333443333 25666654433222 1 34442
Q ss_pred --CCHHHHHHHHHHHHHcCCCeEEEee-ee
Q 027620 169 --GSEADGREACKILHAAGPAKVVITS-IN 195 (221)
Q Consensus 169 --~s~~~~~~a~~~L~~~G~~~VvVT~-G~ 195 (221)
.+.+++..+++.+...|.+.+++.. |.
T Consensus 154 ~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~ 183 (276)
T 1vs1_A 154 FGNTVEELLAAAEYILLEGNWQVVLVERGI 183 (276)
T ss_dssp TTCCHHHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 2778999999999999987777654 65
No 84
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=38.01 E-value=57 Score=28.16 Aligned_cols=79 Identities=15% Similarity=0.237 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHH------Hh--cCCCC----
Q 027620 101 LNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAE------QL--TGFRI---- 168 (221)
Q Consensus 101 ~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~------~l--~g~~~---- 168 (221)
.+-...+.+.+++. |++++-.| ++.+..+.+.+ + .+|+++.--.|+. .+ +|.++
T Consensus 100 ~e~~~~L~~~~~~~--Gi~~~stp---------fD~~svd~l~~-~--~vd~~KIgS~~~~N~pLL~~va~~gKPViLSt 165 (385)
T 1vli_A 100 AEWILPLLDYCREK--QVIFLSTV---------CDEGSADLLQS-T--SPSAFKIASYEINHLPLLKYVARLNRPMIFST 165 (385)
T ss_dssp GGGHHHHHHHHHHT--TCEEECBC---------CSHHHHHHHHT-T--CCSCEEECGGGTTCHHHHHHHHTTCSCEEEEC
T ss_pred HHHHHHHHHHHHHc--CCcEEEcc---------CCHHHHHHHHh-c--CCCEEEECcccccCHHHHHHHHhcCCeEEEEC
Confidence 44556677888888 88887776 44544443322 1 3677776554422 22 34442
Q ss_pred --CCHHHHHHHHHHHHHcCCCeEEEee
Q 027620 169 --GSEADGREACKILHAAGPAKVVITS 193 (221)
Q Consensus 169 --~s~~~~~~a~~~L~~~G~~~VvVT~ 193 (221)
.|.+++..+++.+.+.|++.|++--
T Consensus 166 GmaTl~Ei~~Ave~i~~~Gn~~iiLlh 192 (385)
T 1vli_A 166 AGAEISDVHEAWRTIRAEGNNQIAIMH 192 (385)
T ss_dssp TTCCHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHCCCCcEEEEe
Confidence 5789999999999999987777643
No 85
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=37.01 E-value=1.1e+02 Score=21.56 Aligned_cols=21 Identities=10% Similarity=0.137 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHhcCCCCeEEEc
Q 027620 101 LNTILQVVEKLRSINPNLIYVCD 123 (221)
Q Consensus 101 ~~~i~~~i~~ak~~~~~~~vvlD 123 (221)
.+.+.+++...+.. |+++++=
T Consensus 12 peilkeivreikrq--gvrvvll 32 (162)
T 2l82_A 12 PEILKEIVREIKRQ--GVRVVLL 32 (162)
T ss_dssp HHHHHHHHHHHHHT--TCEEEEE
T ss_pred HHHHHHHHHHHHhC--CeEEEEE
Confidence 35566677777777 7777664
No 86
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=35.92 E-value=1.1e+02 Score=24.00 Aligned_cols=37 Identities=16% Similarity=0.301 Sum_probs=22.1
Q ss_pred ccEEEEeecCChhHHHHHHHHHHHHHh-cCCCCeEEEcccccC
Q 027620 87 YTHLLTGYIGSVSFLNTILQVVEKLRS-INPNLIYVCDPVMGD 128 (221)
Q Consensus 87 ~~~v~~G~l~~~~~~~~i~~~i~~ak~-~~~~~~vvlDp~~~~ 128 (221)
++.+++|+ +.-...=.++++.+++ . +.++++|-...+
T Consensus 38 v~~~Kvg~---~lf~~~G~~~v~~l~~~~--g~~v~lD~Kl~D 75 (228)
T 3m47_A 38 IDTVKIGY---PLVLSEGMDIIAEFRKRF--GCRIIADFKVAD 75 (228)
T ss_dssp CSEEEEEH---HHHHHHCTHHHHHHHHHH--CCEEEEEEEECS
T ss_pred ccEEEEcH---HHHHhcCHHHHHHHHhcC--CCeEEEEEeecc
Confidence 45677775 2222222345666666 5 788999986553
No 87
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=35.36 E-value=99 Score=24.97 Aligned_cols=63 Identities=11% Similarity=0.066 Sum_probs=39.3
Q ss_pred cCCCCCccceeeCCHHHHHHHHHHHHhcCcccccEEEEeecCC-hhHHHHHHHHHHHHHhcCCCCeEEEc
Q 027620 55 NHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLTGYIGS-VSFLNTILQVVEKLRSINPNLIYVCD 123 (221)
Q Consensus 55 ~~~~~~~~~G~~l~~~~i~~~l~~i~~~~~l~~~~v~~G~l~~-~~~~~~i~~~i~~ak~~~~~~~vvlD 123 (221)
...|++.+.+.-+++..++.+++..-. ++|.++.|.=.+ -.+.+.+.+.++.++++ ++.+..-
T Consensus 11 R~~GlT~v~dkglg~~~~~d~Le~~g~----yID~lKfg~Gt~~l~~~~~l~eki~l~~~~--gV~v~~G 74 (251)
T 1qwg_A 11 FQRGLTVVLDKGLPPKFVEDYLKVCGD----YIDFVKFGWGTSAVIDRDVVKEKINYYKDW--GIKVYPG 74 (251)
T ss_dssp CCCCCEEEEESSCCHHHHHHHHHHHGG----GCSEEEECTTGGGGSCHHHHHHHHHHHHTT--TCEEEEC
T ss_pred cccCeeEEecCCCCHHHHHHHHHHhhh----hcceEEecCceeeecCHHHHHHHHHHHHHc--CCeEECC
Confidence 344555444445777778887665432 477788774221 12366788888888888 8777544
No 88
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=33.51 E-value=1.6e+02 Score=24.23 Aligned_cols=50 Identities=12% Similarity=0.009 Sum_probs=33.1
Q ss_pred CHHHHHHHHHHHHhcCcccccEEEEeecCChhH--HHHHHHHHHHHHh-cCCCCeEEE-cc
Q 027620 68 NGQQLCDLIEGLEANNLLYYTHLLTGYIGSVSF--LNTILQVVEKLRS-INPNLIYVC-DP 124 (221)
Q Consensus 68 ~~~~i~~~l~~i~~~~~l~~~~v~~G~l~~~~~--~~~i~~~i~~ak~-~~~~~~vvl-Dp 124 (221)
.+++..+.++.+... ..|++++|+ .... .+.+.++++.+|+ . ++|+++ -|
T Consensus 51 ~~~~~~~~~~~~~~s---GtDai~VGS--~~vt~~~~~~~~~v~~ik~~~--~lPvil~fP 104 (286)
T 3vk5_A 51 PVTEAVEKAAELTRL---GFAAVLLAS--TDYESFESHMEPYVAAVKAAT--PLPVVLHFP 104 (286)
T ss_dssp CHHHHHHHHHHHHHT---TCSCEEEEC--SCCSSHHHHHHHHHHHHHHHC--SSCEEEECC
T ss_pred CcHHHHHHHHHHHhc---CCCEEEEcc--CCCCcchHHHHHHHHHHHHhC--CCCEEEECC
Confidence 345555555555433 357789994 3344 5667778888888 5 789999 77
No 89
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=33.00 E-value=1.6e+02 Score=22.23 Aligned_cols=126 Identities=12% Similarity=0.111 Sum_probs=60.5
Q ss_pred ccchhhcHHHHHhc-CCcee-eeeeEEeecCCC-CCccceeeCCHHHHHHHHHHHHhcCcccccEEEEeecCChhHHHHH
Q 027620 28 YVGNKSAVFPLQLL-GYDVD-PIHSVQFSNHTG-YPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTI 104 (221)
Q Consensus 28 ~vG~d~~~~~l~~~-gi~~~-~v~~~~~~~~~~-~~~~~G~~l~~~~i~~~l~~i~~~~~l~~~~v~~G~l~~~~~~~~i 104 (221)
.+|.+.+.+.|.+. .-... .+..++++...| ....+-..++.+++++. ++....+...-+ -|.. -+++.+.+
T Consensus 11 G~GK~Tl~~~L~~~~~~~~~~svs~TTR~pR~gE~~G~dY~Fvs~~eF~~~---i~~g~flE~~~~-~g~~-YGt~~~~v 85 (186)
T 1ex7_A 11 GTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSM---IKNNEFIEWAQF-SGNY-YGSTVASV 85 (186)
T ss_dssp TSSHHHHHHHHHHHCTTTEEECCCEECSCCCTTCCBTTTBEECCHHHHHHH---HHTTCEEEEEEE-TTEE-EEEEHHHH
T ss_pred CCCHHHHHHHHHHhCCCCeEEEEEEeccCCCCCCcCCceeEeecHHHHHHH---HHcCCEEEEEEE-cCce-eeeeccee
Confidence 46777777765443 22222 233344433222 11111235777777664 444443221111 1111 13445655
Q ss_pred HHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCC----CceEEecCHHHHHH-hcCCCCCCHHHHH
Q 027620 105 LQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP----VASMLTPNQFEAEQ-LTGFRIGSEADGR 175 (221)
Q Consensus 105 ~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~----~~dvi~pN~~Ea~~-l~g~~~~s~~~~~ 175 (221)
.+.++. |..+++|.. ......+++ .++ .+.+..|+.++++. |.+..-++++.+.
T Consensus 86 ~~~l~~------g~~vil~id----------~~g~~~~k~-~~~~~~~~Ifi~pps~e~L~~RL~~Rg~e~~e~i~ 144 (186)
T 1ex7_A 86 KQVSKS------GKTCILDID----------MQGVKSVKA-IPELNARFLFIAPPSVEDLKKRLEGRGTETEESIN 144 (186)
T ss_dssp HHHHHH------TSEEEEECC----------HHHHHHHHT-CGGGCCEEEEEECSCHHHHHHHHHHHCCSCHHHHH
T ss_pred eehhhC------CCEEEecCC----------HHHHHHHHH-hcccCceEEEEeCCCHHHHHHHHHhcCCCCHHHHH
Confidence 554443 667888862 223344443 333 35677889988764 5544445555443
No 90
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=32.73 E-value=2.3e+02 Score=23.97 Aligned_cols=77 Identities=13% Similarity=0.125 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHH------Hh--cCCCC---
Q 027620 100 FLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAE------QL--TGFRI--- 168 (221)
Q Consensus 100 ~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~------~l--~g~~~--- 168 (221)
+.+-...+.+.+++. |+.++-.| ++.+..+.+.+ + .+|+++.--.|+. .+ +|.++
T Consensus 89 ~~e~~~~L~~~~~~~--Gi~~~st~---------~d~~svd~l~~-~--~v~~~KI~S~~~~n~~LL~~va~~gkPviLs 154 (349)
T 2wqp_A 89 NEEDEIKLKEYVESK--GMIFISTL---------FSRAAALRLQR-M--DIPAYKIGSGECNNYPLIKLVASFGKPIILS 154 (349)
T ss_dssp CHHHHHHHHHHHHHT--TCEEEEEE---------CSHHHHHHHHH-H--TCSCEEECGGGTTCHHHHHHHHTTCSCEEEE
T ss_pred CHHHHHHHHHHHHHh--CCeEEEee---------CCHHHHHHHHh-c--CCCEEEECcccccCHHHHHHHHhcCCeEEEE
Confidence 456677788888888 98888777 44554554433 1 3677776544422 22 34442
Q ss_pred ---CCHHHHHHHHHHHHHcCCCeEEE
Q 027620 169 ---GSEADGREACKILHAAGPAKVVI 191 (221)
Q Consensus 169 ---~s~~~~~~a~~~L~~~G~~~VvV 191 (221)
.|.+++..+++.+.+.|. .|++
T Consensus 155 tGmat~~Ei~~Ave~i~~~G~-~iiL 179 (349)
T 2wqp_A 155 TGMNSIESIKKSVEIIREAGV-PYAL 179 (349)
T ss_dssp CTTCCHHHHHHHHHHHHHHTC-CEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCC-CEEE
Confidence 578999999999998888 4554
No 91
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=30.32 E-value=1.9e+02 Score=22.50 Aligned_cols=46 Identities=15% Similarity=0.229 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHhcCcccccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeE-EEcc
Q 027620 70 QQLCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIY-VCDP 124 (221)
Q Consensus 70 ~~i~~~l~~i~~~~~l~~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~v-vlDp 124 (221)
+...+.++.+... .+|++++..... +.....++.+++. ++|| .+|.
T Consensus 48 ~~~~~~i~~l~~~---~vdgiii~~~~~----~~~~~~~~~~~~~--giPvV~~~~ 94 (297)
T 3rot_A 48 PKQVQFIESALAT---YPSGIATTIPSD----TAFSKSLQRANKL--NIPVIAVDT 94 (297)
T ss_dssp HHHHHHHHHHHHT---CCSEEEECCCCS----STTHHHHHHHHHH--TCCEEEESC
T ss_pred HHHHHHHHHHHHc---CCCEEEEeCCCH----HHHHHHHHHHHHC--CCCEEEEcC
Confidence 3334444544443 367666543221 1223345666666 7665 4564
No 92
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=30.29 E-value=1.9e+02 Score=24.42 Aligned_cols=76 Identities=12% Similarity=0.207 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHH------HHh--cCCC-----
Q 027620 101 LNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEA------EQL--TGFR----- 167 (221)
Q Consensus 101 ~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea------~~l--~g~~----- 167 (221)
.+-...+.+.+++. |++++-.| ++.+..+.+.+ + .+|+++.--.|+ +.+ +|.+
T Consensus 77 ~e~~~~L~~~~~~~--Gi~~~st~---------fD~~svd~l~~-~--~v~~~KI~S~~~~N~pLL~~va~~gKPviLst 142 (350)
T 3g8r_A 77 PEQMQKLVAEMKAN--GFKAICTP---------FDEESVDLIEA-H--GIEIIKIASCSFTDWPLLERIARSDKPVVAST 142 (350)
T ss_dssp HHHHHHHHHHHHHT--TCEEEEEE---------CSHHHHHHHHH-T--TCCEEEECSSSTTCHHHHHHHHTSCSCEEEEC
T ss_pred HHHHHHHHHHHHHc--CCcEEecc---------CCHHHHHHHHH-c--CCCEEEECcccccCHHHHHHHHhhCCcEEEEC
Confidence 45566667777777 77776666 34444443332 1 266665433332 111 2333
Q ss_pred -CCCHHHHHHHHHHHHHcCCCeEEE
Q 027620 168 -IGSEADGREACKILHAAGPAKVVI 191 (221)
Q Consensus 168 -~~s~~~~~~a~~~L~~~G~~~VvV 191 (221)
..|.+++..+++.+.+.|.+ +++
T Consensus 143 Gmstl~Ei~~Ave~i~~~g~~-viL 166 (350)
T 3g8r_A 143 AGARREDIDKVVSFMLHRGKD-LTI 166 (350)
T ss_dssp TTCCHHHHHHHHHHHHTTTCC-EEE
T ss_pred CCCCHHHHHHHHHHHHHcCCC-EEE
Confidence 25789999999999888875 544
No 93
>3l52_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, PSI-2, protein structure initiative; 1.35A {Streptomyces avermitilis} PDB: 3v75_A*
Probab=29.77 E-value=2e+02 Score=23.57 Aligned_cols=63 Identities=17% Similarity=0.162 Sum_probs=39.3
Q ss_pred ccEEEEeecC---Chh-HHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCC-----CceEEecCH
Q 027620 87 YTHLLTGYIG---SVS-FLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP-----VASMLTPNQ 157 (221)
Q Consensus 87 ~~~v~~G~l~---~~~-~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~-----~~dvi~pN~ 157 (221)
+.+++.|+-- .+. ..+.+.++++.++++ +.+|++|-...+ + +.+.+.+.+.++. .+|.++.+-
T Consensus 63 v~~~Kvg~~lf~~~G~~G~~~l~~~i~~l~~~--g~~VflDlK~~D-----I-pnTv~~ya~~~~~~~~~lg~D~vTvh~ 134 (284)
T 3l52_A 63 VAVFKPQSAFFERFGSRGVAVLEKTVAEARAA--GALVVMDAKRGD-----I-GSTMAAYAEAFLRKDSPLFSDALTVSP 134 (284)
T ss_dssp CSEEEEBHHHHHTTHHHHHHHHHHHHHHHHHT--TCEEEEEEEECC-----C-HHHHHHHHHHHSSTTSTTCCSEEEECC
T ss_pred ceEEEeeHHHHHhcCHHHHHHHHHHHHHHHHC--CCcEEEEecccC-----c-HHHHHHHHHHHhccccccCCcEEEEec
Confidence 4568887521 111 145677789999988 999999986554 2 2333333333543 488888764
No 94
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=29.65 E-value=96 Score=21.97 Aligned_cols=66 Identities=12% Similarity=0.110 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHHHHHhcCCCCCCHHHHHHHHHH
Q 027620 101 LNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKI 180 (221)
Q Consensus 101 ~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~Ea~~l~g~~~~s~~~~~~a~~~ 180 (221)
.+.+..+.+.++.+ ++.++.||-. .| +..+..+.+ .++.+........++ |.+..+.+.+.++.+.
T Consensus 38 ~~~l~~I~~~~~~r--~VIi~TD~D~--~G-----ekIRk~i~~-~lp~~~hafi~r~~~----gVE~a~~~~I~~aL~~ 103 (119)
T 2fcj_A 38 DARLEELADELEGY--DVYLLADADE--AG-----EKLRRQFRR-MFPEAEHLYIDRAYR----EVAAAPIWHLAQVLLR 103 (119)
T ss_dssp HHHHHHHHHHTTTS--EEEEECCSSH--HH-----HHHHHHHHH-HCTTSEEECCCTTTC----STTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCC--CEEEEECCCc--cH-----HHHHHHHHH-HCCCCcEEeccCCcc----CcccCCHHHHHHHHHh
Confidence 44555555656555 7778889832 22 344455555 788877666666653 7766666666665543
No 95
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=28.44 E-value=70 Score=25.40 Aligned_cols=48 Identities=17% Similarity=0.176 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHhcCccccc-EEEEeecCChhHHHHHHHHHHHHHhcCCCCeE-EEcc
Q 027620 69 GQQLCDLIEGLEANNLLYYT-HLLTGYIGSVSFLNTILQVVEKLRSINPNLIY-VCDP 124 (221)
Q Consensus 69 ~~~i~~~l~~i~~~~~l~~~-~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~v-vlDp 124 (221)
.+.+.+..+.+.+.. ... .|+.|++--+. +.+.++++|+. +++| .++.
T Consensus 130 e~~l~~av~av~~lp--r~~~lvlags~mgg~----i~~~v~~~~~~--~i~vi~l~m 179 (223)
T 1y7p_A 130 EEEIAEAVKAVSRLH--RAEVLVLAGGIMGGK----ITEEVKKLRKS--GIRVISLSM 179 (223)
T ss_dssp HHHHHHHHHHGGGST--TEEEEEEESSBCCTH----HHHHHHHHGGG--TCEEEEESC
T ss_pred HHHHHHHHHHHhhcc--ccceeeEecccccch----HHHHHHHHHHC--CCeEEEecC
Confidence 355555555554432 122 37889886444 34567788887 8775 4443
No 96
>4eys_A MCCC family protein; MCCF like, serine peptidase, csgid, structural genomics, NIA national institute of allergy and infectious diseases; HET: AMP; 1.58A {Streptococcus pneumoniae} PDB: 4e94_A*
Probab=27.53 E-value=1.2e+02 Score=25.34 Aligned_cols=57 Identities=12% Similarity=0.159 Sum_probs=39.1
Q ss_pred CHHHHHHHHHHHHhcCccc-ccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccc
Q 027620 68 NGQQLCDLIEGLEANNLLY-YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVM 126 (221)
Q Consensus 68 ~~~~i~~~l~~i~~~~~l~-~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~ 126 (221)
++..+++.+..++.+.++. +.++++|........+.+.+++...-.. ++||+.|-..
T Consensus 259 ~~y~idRmL~qL~~aG~f~~~~GiilG~~~~~~~~~~~~~vl~~~l~~--~iPV~~~~~~ 316 (346)
T 4eys_A 259 KPEDFKKMLLTLKDTGIFAVINGLLVGKPMDETFHDDYKEALLDIIDS--NIPIVYNLNV 316 (346)
T ss_dssp CHHHHHHHHHHHHTTTGGGTCSEEEEECCGGGTTHHHHHHHHHHHSCT--TSCEEEEESC
T ss_pred CHHHHHHHHHHHHHcCCcccCCEEEEecCCCCCcchhHHHHHHHHHcC--CCcEEECCCC
Confidence 4578999999998887655 6689999864333334455655554333 7899999743
No 97
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=27.44 E-value=91 Score=25.57 Aligned_cols=62 Identities=16% Similarity=0.209 Sum_probs=37.9
Q ss_pred cCCCCCccceeeCCHHHHHHHHHHHHhcCcccccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEc
Q 027620 55 NHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCD 123 (221)
Q Consensus 55 ~~~~~~~~~G~~l~~~~i~~~l~~i~~~~~l~~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlD 123 (221)
...|++.+.+.-+....++.+++..-. ++|.++.|.=.+....+ +.+.++.++++ ++.+..-
T Consensus 38 R~~GlT~v~Dkglg~~~~~DlLe~ag~----yID~lKfg~GTs~l~~~-l~ekI~l~~~~--gV~v~~G 99 (276)
T 1u83_A 38 RETGQSILIDNGYPLQFFKDAIAGASD----YIDFVKFGWGTSLLTKD-LEEKISTLKEH--DITFFFG 99 (276)
T ss_dssp CSSSCEEEEESSCCHHHHHHHHHHHGG----GCCEEEECTTGGGGCTT-HHHHHHHHHHT--TCEEEEC
T ss_pred cccCceEEecCCCCHHHHHHHHHHhhh----hcceEEecCcchhhhHH-HHHHHHHHHHc--CCeEeCC
Confidence 344555554445777788887665432 47788887422222223 77788888888 7777554
No 98
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=26.85 E-value=1.2e+02 Score=24.51 Aligned_cols=36 Identities=25% Similarity=0.280 Sum_probs=23.6
Q ss_pred cEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccC
Q 027620 88 THLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD 128 (221)
Q Consensus 88 ~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~ 128 (221)
+.+++|+ +.-...=.++++.+++. +.+|++|-...+
T Consensus 32 ~~~KvG~---~l~~~~G~~~v~~Lk~~--g~~VflDlK~~D 67 (259)
T 3tfx_A 32 VFVKVGM---ELFYNAGIDVIKKLTQQ--GYKIFLDLKMHD 67 (259)
T ss_dssp CEEEECH---HHHHHHCHHHHHHHHHT--TCEEEEEEEECS
T ss_pred eEEEeCH---HHHHhcCHHHHHHHHHC--CCcEEEEecccc
Confidence 5788886 33333334567777777 888999986543
No 99
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=25.48 E-value=1.4e+02 Score=23.58 Aligned_cols=36 Identities=22% Similarity=0.118 Sum_probs=22.2
Q ss_pred ccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEccccc
Q 027620 87 YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG 127 (221)
Q Consensus 87 ~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~ 127 (221)
++.+++|+ +.-...=.++++.++++ +.+|++|-...
T Consensus 34 v~~~Kvg~---~lf~~~G~~~v~~L~~~--g~~iflDlK~~ 69 (239)
T 3tr2_A 34 LCHLKIGS---ILFTRYGPAFVEELMQK--GYRIFLDLKFY 69 (239)
T ss_dssp TCEEEEEH---HHHHHHHHHHHHHHHHT--TCCEEEEEEEC
T ss_pred ccEEEeCH---HHHHhhCHHHHHHHHhc--CCCEEEEeccc
Confidence 45677776 33333334566777776 77888887643
No 100
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=25.11 E-value=84 Score=19.64 Aligned_cols=30 Identities=7% Similarity=-0.056 Sum_probs=22.8
Q ss_pred cCHHHHHHhcCCCCC----CHHHHHHHHHHHHHc
Q 027620 155 PNQFEAEQLTGFRIG----SEADGREACKILHAA 184 (221)
Q Consensus 155 pN~~Ea~~l~g~~~~----s~~~~~~a~~~L~~~ 184 (221)
++..||..++|.+.. +.+.+.++=++|+..
T Consensus 1 mt~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~ 34 (65)
T 2guz_B 1 MTLDESCKILNIEESKGDLNMDKINNRFNYLFEV 34 (65)
T ss_dssp CCHHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHH
Confidence 367899999998744 677888887888754
No 101
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=25.00 E-value=1.3e+02 Score=24.11 Aligned_cols=50 Identities=16% Similarity=0.055 Sum_probs=29.2
Q ss_pred HHHHHHHHhcCcccccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccC
Q 027620 73 CDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD 128 (221)
Q Consensus 73 ~~~l~~i~~~~~l~~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~ 128 (221)
++.++.++...- .++.+++|+ +.-...=.++++.++++ +.+|++|-...+
T Consensus 40 ~~al~l~~~l~~-~v~~~KvG~---~l~~~~G~~~v~~Lk~~--g~~VflDlK~~D 89 (255)
T 3ldv_A 40 ADALAFVDKIDP-STCRLKVGK---EMFTLFGPDFVRELHKR--GFSVFLDLKFHD 89 (255)
T ss_dssp HHHHHHHTTSCG-GGCEEEEEH---HHHHHHHHHHHHHHHHT--TCCEEEEEEECS
T ss_pred HHHHHHHHHhCC-cCcEEEeCH---HHHHhhCHHHHHHHHhc--CCCEEEEEeccc
Confidence 333334443332 345688886 33333334567777777 788999986543
No 102
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=23.43 E-value=3e+02 Score=22.45 Aligned_cols=78 Identities=13% Similarity=0.116 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHH---------HHHhcCCCC----
Q 027620 102 NTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFE---------AEQLTGFRI---- 168 (221)
Q Consensus 102 ~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~E---------a~~l~g~~~---- 168 (221)
+-+..+.+.+++. |++++-+| ++++..+.+ .+.+|+++.-..+ +.. ++.++
T Consensus 78 ~GL~~L~~~~~e~--Glp~~Tev---------~d~~~v~~l----~~~vd~lqIgA~~~~n~~LLr~va~-~gkPVilK~ 141 (285)
T 3sz8_A 78 EGLKIFAEVKARF--GVPVITDV---------HEAEQAAPV----AEIADVLQVPAFLARQTDLVVAIAK-AGKPVNVKK 141 (285)
T ss_dssp HHHHHHHHHHHHH--CCCEEEEC---------CSGGGHHHH----HTTCSEEEECGGGTTCHHHHHHHHH-TSSCEEEEC
T ss_pred HHHHHHHHHHHhc--CCeEEEEe---------CCHHHHHHH----HHhCCEEEECccccCCHHHHHHHHc-cCCcEEEeC
Confidence 3344445555677 88888887 334444433 3347777765422 222 34442
Q ss_pred ---CCHHHHHHHHHHHHHcCCCeEEE-eeee
Q 027620 169 ---GSEADGREACKILHAAGPAKVVI-TSIN 195 (221)
Q Consensus 169 ---~s~~~~~~a~~~L~~~G~~~VvV-T~G~ 195 (221)
.+.+++..+++++.+.|.+.|++ -+|.
T Consensus 142 G~~~t~~ei~~ave~i~~~Gn~~i~L~erg~ 172 (285)
T 3sz8_A 142 PQFMSPTQLKHVVSKCGEVGNDRVMLCERGS 172 (285)
T ss_dssp CTTSCGGGTHHHHHHHHHTTCCCEEEEECCE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 36789999999999988877765 4565
No 103
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=23.35 E-value=3e+02 Score=22.29 Aligned_cols=106 Identities=12% Similarity=0.059 Sum_probs=64.6
Q ss_pred eCCHHHHHHHHHHHHhcCcccccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHh
Q 027620 66 VLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREK 145 (221)
Q Consensus 66 ~l~~~~i~~~l~~i~~~~~l~~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ 145 (221)
.++.+++.+.++.+..... -.+++.|-.++....+.+.++++.+++. +..+.+++. ..+++..+.+++.
T Consensus 83 ~ls~eei~~~i~~~~~~g~--~~i~~~gGe~p~~~~~~~~~li~~i~~~--~~~i~~s~g-------~l~~e~l~~L~~a 151 (348)
T 3iix_A 83 RMTPEEIVERARLAVQFGA--KTIVLQSGEDPYXMPDVISDIVKEIKKM--GVAVTLSLG-------EWPREYYEKWKEA 151 (348)
T ss_dssp BCCHHHHHHHHHHHHHTTC--SEEEEEESCCGGGTTHHHHHHHHHHHTT--SCEEEEECC-------CCCHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHCCC--CEEEEEeCCCCCccHHHHHHHHHHHHhc--CceEEEecC-------CCCHHHHHHHHHh
Confidence 4788888887776655432 1234555432223347888999999887 777776652 1456666666552
Q ss_pred cCCCceEEe-----cCHHHHHHhcCCCCCCHHHHHHHHHHHHHcCCC
Q 027620 146 VVPVASMLT-----PNQFEAEQLTGFRIGSEADGREACKILHAAGPA 187 (221)
Q Consensus 146 ll~~~dvi~-----pN~~Ea~~l~g~~~~s~~~~~~a~~~L~~~G~~ 187 (221)
.++.+. +|.+-...+.+.. +.++..++.+.+.+.|.+
T Consensus 152 ---g~~~v~i~let~~~~~~~~i~~~~--~~~~~~~~i~~~~~~Gi~ 193 (348)
T 3iix_A 152 ---GADRYLLRHETANPVLHRKLRPDT--SFENRLNCLLTLKELGYE 193 (348)
T ss_dssp ---TCCEEECCCBCSCHHHHHHHSTTS--CHHHHHHHHHHHHHTTCE
T ss_pred ---CCCEEeeeeeeCCHHHHHHhCCCc--CHHHHHHHHHHHHHhCCe
Confidence 344443 4444444554432 678888888888888864
No 104
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=22.26 E-value=3.4e+02 Score=22.52 Aligned_cols=88 Identities=11% Similarity=0.114 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHhcCCCCe---EEEcccccC--CCCCCCchhHHHHHHH----hcCCCceEE-ecCHHHHHHhcCCCCCC
Q 027620 101 LNTILQVVEKLRSINPNLI---YVCDPVMGD--EGKLYVPSELVSVYRE----KVVPVASML-TPNQFEAEQLTGFRIGS 170 (221)
Q Consensus 101 ~~~i~~~i~~ak~~~~~~~---vvlDp~~~~--~g~~~~~~~~~~~l~~----~ll~~~dvi-~pN~~Ea~~l~g~~~~s 170 (221)
.+.+.+.++.+++. |++ +++||.... .|+ ..+..++.++. .-+.++-++ ..|..=...++|.+..+
T Consensus 176 ~~~l~~~i~~a~~~--GI~~~~IilDPG~G~~~F~K--t~~~n~~lL~~l~~l~~lg~PvL~G~SRKsfig~~~~~~~~~ 251 (314)
T 3tr9_A 176 KKELQESIQRCKKA--GISEDRIIIDPGFGQGNYGK--NVSENFYLLNKLPEFVAMGLPVLSGWSRKSMIGDVLNQPPEN 251 (314)
T ss_dssp HHHHHHHHHHHHHT--TCCGGGEEEECCCCSGGGCC--CHHHHHHHHHTTHHHHTTSSCBEECCTTCHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHc--CCCHhHEEEeCCCCchhhcC--CHHHHHHHHHHHHHHhcCCCCEEEEechhhhhhhhcCCChHH
Confidence 45667788888888 884 999996541 121 12333444432 023456666 34444445556643211
Q ss_pred HHHHHHHHH-HHHHcCCCeEEEe
Q 027620 171 EADGREACK-ILHAAGPAKVVIT 192 (221)
Q Consensus 171 ~~~~~~a~~-~L~~~G~~~VvVT 192 (221)
......++. ....+|+..+-+.
T Consensus 252 R~~~t~a~~~~a~~~Ga~IvRvH 274 (314)
T 3tr9_A 252 RLFGSIAADVLAVYHGASIIRTH 274 (314)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEES
T ss_pred hHHHHHHHHHHHHHcCCcEEEeC
Confidence 112222222 2346788766554
No 105
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=22.16 E-value=3.3e+02 Score=22.40 Aligned_cols=77 Identities=17% Similarity=0.157 Sum_probs=48.1
Q ss_pred HHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHhcCCCceEEecCHHH---------HHHhcCCCC-----
Q 027620 103 TILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFE---------AEQLTGFRI----- 168 (221)
Q Consensus 103 ~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ll~~~dvi~pN~~E---------a~~l~g~~~----- 168 (221)
-+..+.+.+++. |++++-+| ++++..+. +.+.+|+++.-..+ +.. ++.++
T Consensus 100 GL~~L~~~~~e~--GLpv~Tev---------~D~~~v~~----l~~~vd~lkIgA~~~~n~~LLr~va~-~gkPVilK~G 163 (298)
T 3fs2_A 100 ALEVFSDLKKEY--GFPVLTDI---------HTEEQCAA----VAPVVDVLQIPAFLCRQTDLLIAAAR-TGRVVNVKKG 163 (298)
T ss_dssp HHHHHHHHHHHH--CCCEEEEC---------CSHHHHHH----HTTTCSEEEECGGGTTCHHHHHHHHH-TTSEEEEECC
T ss_pred HHHHHHHHHHhc--CCeEEEEe---------CCHHHHHH----HHhhCCEEEECccccCCHHHHHHHHc-cCCcEEEeCC
Confidence 344444555677 99998887 34444443 34458888765432 222 23331
Q ss_pred --CCHHHHHHHHHHHHHcCCCeEEE-eeee
Q 027620 169 --GSEADGREACKILHAAGPAKVVI-TSIN 195 (221)
Q Consensus 169 --~s~~~~~~a~~~L~~~G~~~VvV-T~G~ 195 (221)
.+.+++..+++++.+.|.+.|++ -+|.
T Consensus 164 ms~t~~ei~~ave~i~~~Gn~~iiL~erg~ 193 (298)
T 3fs2_A 164 QFLAPWDMKNVLAKITESGNPNVLATERGV 193 (298)
T ss_dssp TTCCGGGHHHHHHHHHTTTCCCEEEEECCE
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 36789999999999988877765 4565
No 106
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=22.09 E-value=1.5e+02 Score=25.52 Aligned_cols=40 Identities=8% Similarity=0.159 Sum_probs=28.8
Q ss_pred cccEEEEeecCChhH----HHHHHHHHHHHHhcCCCCeEEEccccc
Q 027620 86 YYTHLLTGYIGSVSF----LNTILQVVEKLRSINPNLIYVCDPVMG 127 (221)
Q Consensus 86 ~~~~v~~G~l~~~~~----~~~i~~~i~~ak~~~~~~~vvlDp~~~ 127 (221)
.+.-|++.++-.+.. .+.+.++++.|++. |..|++|-+|.
T Consensus 54 Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~--g~~vi~DVsp~ 97 (385)
T 1x7f_A 54 GFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDN--NMEVILDVAPA 97 (385)
T ss_dssp TEEEEEEEECCC--------HHHHHHHHHHHHT--TCEEEEEECTT
T ss_pred CCCEEEccCCccCCChHHHHHHHHHHHHHHHHC--CCEEEEECCHH
Confidence 466677777543332 45677899999999 99999999885
No 107
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=21.94 E-value=2.5e+02 Score=20.90 Aligned_cols=96 Identities=9% Similarity=0.004 Sum_probs=52.5
Q ss_pred eCCHHHHHHHHHHHHhcCcccccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHh
Q 027620 66 VLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREK 145 (221)
Q Consensus 66 ~l~~~~i~~~l~~i~~~~~l~~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ 145 (221)
.++.++++++.+.+...+. +++.|. +...-....+..++... +.++.+-+... . .
T Consensus 31 ~l~~~~l~~~~~~i~~a~~----I~i~G~---G~S~~~A~~~~~~l~~~--g~~~~~~~~~~------~----------~ 85 (200)
T 1vim_A 31 HIDLETVGEMIKLIDSARS----IFVIGA---GRSGYIAKAFAMRLMHL--GYTVYVVGETV------T----------P 85 (200)
T ss_dssp HCCHHHHHHHHHHHHHSSC----EEEECS---HHHHHHHHHHHHHHHHT--TCCEEETTSTT------C----------C
T ss_pred hcCHHHHHHHHHHHhcCCE----EEEEEe---cHHHHHHHHHHHHHHhc--CCeEEEeCCcc------c----------c
Confidence 4567788888888876653 345554 44433444455555444 55554422100 0 0
Q ss_pred cCCCceEEecCHHHHHHhcCCCCCCHHHHHHHHHHHHHcCCCeEEEeeee
Q 027620 146 VVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSIN 195 (221)
Q Consensus 146 ll~~~dvi~pN~~Ea~~l~g~~~~s~~~~~~a~~~L~~~G~~~VvVT~G~ 195 (221)
.+..=|+++. ....|.. .++.++++.+.++|++.|.||.-.
T Consensus 86 ~~~~~DvvI~-----iS~SG~t----~~~i~~~~~ak~~g~~vI~IT~~~ 126 (200)
T 1vim_A 86 RITDQDVLVG-----ISGSGET----TSVVNISKKAKDIGSKLVAVTGKR 126 (200)
T ss_dssp CCCTTCEEEE-----ECSSSCC----HHHHHHHHHHHHHTCEEEEEESCT
T ss_pred CCCCCCEEEE-----EeCCCCc----HHHHHHHHHHHHCCCeEEEEECCC
Confidence 1222233322 1123432 567778888889999999999754
No 108
>3rzi_A Probable 3-deoxy-D-arabino-heptulosonate 7-phosph synthase AROG; DAH7P synthase, shikimate pathway, aromatic biosynthesis; HET: PHE TRP; 1.95A {Mycobacterium tuberculosis} SCOP: c.1.10.8 PDB: 3kgf_A* 2b7o_A* 3nud_A* 3nue_A* 3nv8_A* 3pfp_A* 2w19_A 2w1a_A*
Probab=21.91 E-value=1.8e+02 Score=25.54 Aligned_cols=58 Identities=21% Similarity=0.357 Sum_probs=41.8
Q ss_pred eeeCCHHHHHHHHHHHHhcCcccccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEE--Ecc
Q 027620 64 GQVLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYV--CDP 124 (221)
Q Consensus 64 G~~l~~~~i~~~l~~i~~~~~l~~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vv--lDp 124 (221)
|+..+++++-++++.++.... .-...++.-++...-.+.+=.+++..++. |.+|+ .||
T Consensus 308 GP~~~p~elv~L~~~LnP~~e-pGRlTLI~RmGa~kv~~~LP~li~aV~~~--G~~VvW~cDP 367 (462)
T 3rzi_A 308 GPNMTPELAVEYVERLDPHNK-PGRLTLVSRMGNHKVRDLLPPIVEKVQAT--GHQVIWQCDP 367 (462)
T ss_dssp CTTCCHHHHHHHHHHHCTTCC-TTSEEEEECCCTTTHHHHHHHHHHHHHHT--SCCCEEEECC
T ss_pred CCCCCHHHHHHHHHHhCCCCC-CCeEEEEEccCCchhhhhHHHHHHHHHHC--CCCeEEEeCC
Confidence 457889999999999876653 22256777777666677777888888887 66665 566
No 109
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=20.77 E-value=80 Score=24.11 Aligned_cols=35 Identities=20% Similarity=0.252 Sum_probs=25.0
Q ss_pred CHHHHHHhcCCC-----CCCHHHHHHHHHHHHHcCCCeEE
Q 027620 156 NQFEAEQLTGFR-----IGSEADGREACKILHAAGPAKVV 190 (221)
Q Consensus 156 N~~Ea~~l~g~~-----~~s~~~~~~a~~~L~~~G~~~Vv 190 (221)
...+.+.+++.+ +.++++++++.+++.+.|++.||
T Consensus 108 ~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvV 147 (196)
T 2q5c_A 108 DKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVV 147 (196)
T ss_dssp CHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCeEEE
Confidence 344556666655 35678888889999999987554
No 110
>2iv2_X Formate dehydrogenase H; oxidoreductase, 4Fe-4S, anaerobic, complete proteome, direct protein sequencing, Fe4S4, iron, iron sulfur cluster; HET: 2MD MGD; 2.27A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 1fdi_A* 1fdo_A* 1aa6_A*
Probab=20.76 E-value=1.4e+02 Score=27.37 Aligned_cols=30 Identities=23% Similarity=0.403 Sum_probs=18.9
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHcCCCeEEE
Q 027620 159 EAEQLTGFRIGSEADGREACKILHAAGPAKVVI 191 (221)
Q Consensus 159 Ea~~l~g~~~~s~~~~~~a~~~L~~~G~~~VvV 191 (221)
.++.++|.+ .++++++|+.+.+.+...++.
T Consensus 266 ~~a~itGv~---~~~I~~lA~~~a~a~~~~i~~ 295 (715)
T 2iv2_X 266 SVEDITGVS---ASEIRQAARMYAQAKSAAILW 295 (715)
T ss_dssp GGHHHHCCC---HHHHHHHHHHHHHSSSEEEEE
T ss_pred HHHHHHCcC---HHHHHHHHHHHHhCCCeEEEE
Confidence 355566764 577888888887655433333
No 111
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=20.16 E-value=2.5e+02 Score=20.29 Aligned_cols=102 Identities=10% Similarity=0.026 Sum_probs=54.9
Q ss_pred eCCHHHHHHHHHHHHhcCcccccEEEEeecCChhHHHHHHHHHHHHHhcCCCCeEEEcccccCCCCCCCchhHHHHHHHh
Q 027620 66 VLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREK 145 (221)
Q Consensus 66 ~l~~~~i~~~l~~i~~~~~l~~~~v~~G~l~~~~~~~~i~~~i~~ak~~~~~~~vvlDp~~~~~g~~~~~~~~~~~l~~~ 145 (221)
.++.+++++..+.+...+. +++.|. +...-....+..++... +.++.+-+. . ..+....+ .
T Consensus 23 ~l~~~~l~~~~~~i~~a~~----I~i~G~---G~S~~~a~~~~~~l~~~--g~~~~~~~~---~-----~~~~~~~~--~ 83 (187)
T 3sho_A 23 QTQPEAIEAAVEAICRADH----VIVVGM---GFSAAVAVFLGHGLNSL--GIRTTVLTE---G-----GSTLTITL--A 83 (187)
T ss_dssp TCCHHHHHHHHHHHHHCSE----EEEECC---GGGHHHHHHHHHHHHHT--TCCEEEECC---C-----THHHHHHH--H
T ss_pred hCCHHHHHHHHHHHHhCCE----EEEEec---CchHHHHHHHHHHHHhc--CCCEEEecC---C-----chhHHHHH--h
Confidence 4667888888888876653 356665 33333333344444444 555544320 0 01111111 1
Q ss_pred cCCCceEEecCHHHHHHhcCCCCCCHHHHHHHHHHHHHcCCCeEEEeeee
Q 027620 146 VVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSIN 195 (221)
Q Consensus 146 ll~~~dvi~pN~~Ea~~l~g~~~~s~~~~~~a~~~L~~~G~~~VvVT~G~ 195 (221)
.+..=|+++. ....|.. .+..++++...++|++.+.||.-.
T Consensus 84 ~~~~~d~~i~-----iS~sG~t----~~~~~~~~~ak~~g~~vi~IT~~~ 124 (187)
T 3sho_A 84 NLRPTDLMIG-----VSVWRYL----RDTVAALAGAAERGVPTMALTDSS 124 (187)
T ss_dssp TCCTTEEEEE-----ECCSSCC----HHHHHHHHHHHHTTCCEEEEESCT
T ss_pred cCCCCCEEEE-----EeCCCCC----HHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3333344433 1123332 567778888889999999999744
Done!