BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027621
(221 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VZB2|PAS2_ARATH Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase PASTICCINO 2 OS=Arabidopsis thaliana GN=PAS2
PE=1 SV=1
Length = 221
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/221 (78%), Positives = 200/221 (90%)
Query: 1 MAGCLSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVL 60
MAG LS++RR+YLT YNW VFAGWAQVLYLA+ TL E+G+ENVY A+E+PLQLAQTAAVL
Sbjct: 1 MAGFLSVVRRVYLTLYNWIVFAGWAQVLYLAITTLKETGYENVYDAIEKPLQLAQTAAVL 60
Query: 61 EILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYS 120
EILHGL+GLVRSP++ATLPQI SRL++TWGIL+SFP+ ++H LV+SLVISWS+TEIIRYS
Sbjct: 61 EILHGLVGLVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFLVTSLVISWSITEIIRYS 120
Query: 121 FFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWN 180
FFG KEALGFAPSW LWLRYS+FLLLYP+GITSEVGLIY ALP+IK SE Y +RMPN N
Sbjct: 121 FFGFKEALGFAPSWHLWLRYSSFLLLYPTGITSEVGLIYLALPHIKTSEMYSVRMPNILN 180
Query: 181 FSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 221
FSFD+FYA ILVL YVPGSPHMY YMLGQRK+ALSKSK+E
Sbjct: 181 FSFDFFYATILVLAIYVPGSPHMYRYMLGQRKRALSKSKRE 221
>sp|Q7XSZ4|PAS2A_ORYSJ Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase PASTICCINO 2A OS=Oryza sativa subsp.
japonica GN=PAS2A PE=2 SV=2
Length = 221
Score = 355 bits (912), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 168/211 (79%), Positives = 188/211 (89%)
Query: 1 MAGCLSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVL 60
MAG S +RRLYL+ YNW VF GWAQVLY A+ TL ESGHE VY AVERPLQ AQTAA L
Sbjct: 1 MAGVGSAVRRLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEAVYAAVERPLQFAQTAAFL 60
Query: 61 EILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYS 120
EILHGL+GLVRSP++ATLPQI SRL++TWGILWSFP+T +HILV+SLVISWS+TEIIRYS
Sbjct: 61 EILHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPETHSHILVTSLVISWSITEIIRYS 120
Query: 121 FFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWN 180
FFGMKEA GFAPSWLLWLRYSTF++LYP+GI+SEVGLIY ALPY+K SE YCLRMPNKWN
Sbjct: 121 FFGMKEAFGFAPSWLLWLRYSTFMVLYPTGISSEVGLIYIALPYMKASEKYCLRMPNKWN 180
Query: 181 FSFDYFYAAILVLGFYVPGSPHMYTYMLGQR 211
FSFD+FYA+IL L YVPGSPHM+TYML QR
Sbjct: 181 FSFDFFYASILSLAIYVPGSPHMFTYMLAQR 211
>sp|Q5ZEJ0|PAS2B_ORYSJ Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase PASTICCINO 2B OS=Oryza sativa subsp.
japonica GN=PAS2B PE=2 SV=1
Length = 221
Score = 347 bits (891), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 164/211 (77%), Positives = 185/211 (87%)
Query: 1 MAGCLSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVL 60
M G S +RRLYL+ YNW VF GWAQVLY A+ TL ESGHE VY AVERPLQ AQTAA L
Sbjct: 1 MTGVGSAVRRLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEAVYAAVERPLQFAQTAAFL 60
Query: 61 EILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYS 120
EILHGL+GLVRSP++ATLPQI SRL++TWGILWSFP+T +HILV+SLVISWS+TEIIRYS
Sbjct: 61 EILHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPETHSHILVTSLVISWSITEIIRYS 120
Query: 121 FFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWN 180
FFGMKE GFAPSWLLWLRYSTF++LYP+GI+SEVGLIY ALPY+K +E YCLRMPNKWN
Sbjct: 121 FFGMKETFGFAPSWLLWLRYSTFMVLYPTGISSEVGLIYIALPYMKATEKYCLRMPNKWN 180
Query: 181 FSFDYFYAAILVLGFYVPGSPHMYTYMLGQR 211
FSFD+ YA+IL L YVPGSPHM+TYML QR
Sbjct: 181 FSFDFSYASILSLAVYVPGSPHMFTYMLAQR 211
>sp|Q9QY80|HACD1_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Mus musculus GN=Ptpla PE=2 SV=1
Length = 281
Score = 162 bits (411), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 132/212 (62%), Gaps = 2/212 (0%)
Query: 5 LSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESG-HENVYKAVERPLQLAQTAAVLEIL 63
L LL +LT YN + AGW + ++ E G H +YK++++ L+ QT A+LE++
Sbjct: 61 LGLLATAWLTFYNIAMTAGWLVLAIAMVRFYMEKGTHRGLYKSIQKTLKFFQTFALLEVV 120
Query: 64 HGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFG 123
H L+G+V + + T Q+SSR+++ W I S QN V ++SW++TEI RYSF+
Sbjct: 121 HCLIGIVPTSVLVTGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVSWTVTEITRYSFYT 180
Query: 124 MKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSF 183
L P ++ W RY+ F++LYP G+ E+ IY ALPY+K+S + +R+PNK+N SF
Sbjct: 181 F-SLLDHLPHFIKWARYNLFIILYPVGVAGELLTIYAALPYVKKSGMFSVRLPNKYNVSF 239
Query: 184 DYFYAAILVLGFYVPGSPHMYTYMLGQRKKAL 215
DY+Y ++ + Y+P P +Y +ML QR+K L
Sbjct: 240 DYYYFLLITMASYIPLFPQLYFHMLRQRRKVL 271
>sp|Q9D3B1|HACD2_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Mus musculus GN=Ptplb PE=2 SV=1
Length = 254
Score = 161 bits (408), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 132/211 (62%), Gaps = 2/211 (0%)
Query: 12 YLTAYNWTVFAGWAQV-LYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLV 70
YL YN + AGW + + L L + + ++Y ++ERPL+ QT A+LEILH +G+V
Sbjct: 41 YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIERPLKFFQTGALLEILHCAIGIV 100
Query: 71 RSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGF 130
S + T Q+ SR+++ W + S + Q+ V VI+W++TEIIRYSF+ L
Sbjct: 101 PSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTF-SLLNH 159
Query: 131 APSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAI 190
P + W RY+ F++LYP G+T E+ IY ALP+++++ Y + +PNK+NFSFDY I
Sbjct: 160 LPYIIKWARYTLFIVLYPMGVTGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYHAFLI 219
Query: 191 LVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 221
L++ Y+P P +Y +M+ QR+K LS +++
Sbjct: 220 LIMISYIPLFPQLYFHMIHQRRKVLSHTEEH 250
>sp|Q4W1W1|HACD1_CANFA Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Canis familiaris GN=PTPLA PE=2 SV=1
Length = 249
Score = 160 bits (406), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 133/212 (62%), Gaps = 2/212 (0%)
Query: 5 LSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESG-HENVYKAVERPLQLAQTAAVLEIL 63
L LL ++LT YN + AGW + ++ E G H+ +YK++++ L+ QT A+LEI+
Sbjct: 29 LGLLATVWLTFYNIAMTAGWLVLAIAMVRFYMEKGTHKGLYKSIQKTLKFFQTFALLEIV 88
Query: 64 HGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFG 123
H L+G+V + + Q+SSR+++ W I S QN V +++W++TEI RYSF+
Sbjct: 89 HCLIGIVPTSVIVAGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVAWTVTEITRYSFYT 148
Query: 124 MKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSF 183
L P ++ W RY+ F++LYP G+ E+ IY ALPY+K++ + +R+PNK+N SF
Sbjct: 149 F-SLLDHLPYFIKWARYNFFIILYPVGVVGELLTIYAALPYVKKTGMFSIRLPNKYNVSF 207
Query: 184 DYFYAAILVLGFYVPGSPHMYTYMLGQRKKAL 215
DY+Y ++ + Y+P P +Y +ML QR+K L
Sbjct: 208 DYYYFLLITMASYIPLFPQLYFHMLRQRRKVL 239
>sp|Q2KIP8|HACD2_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Bos taurus GN=PTPLB PE=2 SV=2
Length = 254
Score = 160 bits (406), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 12 YLTAYNWTVFAGWAQV-LYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLV 70
YL YN + AGW + + L L + + ++Y ++E+PL+ QT A+LEILH +G+V
Sbjct: 41 YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIV 100
Query: 71 RSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGF 130
S + T Q+ SR+++ W + S + Q+ V VI+W++TEIIRYSF+ L
Sbjct: 101 PSSVVLTSIQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTF-SLLNH 159
Query: 131 APSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAI 190
P + W RY+ F++LYP G++ E+ IY ALP+++++ Y + +PNK+NFSFDY+ I
Sbjct: 160 LPYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYYAFLI 219
Query: 191 LVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 221
L++ Y+P P +Y +M+ QR+K LS +++
Sbjct: 220 LIMISYIPLFPQLYFHMIHQRRKILSHTEEH 250
>sp|Q5RBK3|HACD2_PONAB Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Pongo abelii GN=PTPLB PE=2 SV=1
Length = 255
Score = 160 bits (405), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 12 YLTAYNWTVFAGWAQV-LYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLV 70
YL YN + AGW + + L L + + ++Y ++E+PL+ QT A+LEILH +G+V
Sbjct: 42 YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIV 101
Query: 71 RSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGF 130
S + T Q+ SR+++ W + S + Q+ V VI+W++TEIIRYSF+ L
Sbjct: 102 PSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTF-SLLNH 160
Query: 131 APSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAI 190
P + W RY+ F++LYP G++ E+ IY ALP+++++ Y + +PNK+NFSFDY+ I
Sbjct: 161 LPYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYYAFLI 220
Query: 191 LVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 221
L++ Y+P P +Y +M+ QR+K LS +++
Sbjct: 221 LIMISYIPIFPQLYFHMIHQRRKILSHTEEH 251
>sp|Q6Y1H2|HACD2_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Homo sapiens GN=PTPLB PE=1 SV=1
Length = 254
Score = 160 bits (405), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 12 YLTAYNWTVFAGWAQV-LYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLV 70
YL YN + AGW + + L L + + ++Y ++E+PL+ QT A+LEILH +G+V
Sbjct: 41 YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIV 100
Query: 71 RSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGF 130
S + T Q+ SR+++ W + S + Q+ V VI+W++TEIIRYSF+ L
Sbjct: 101 PSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTF-SLLNH 159
Query: 131 APSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAI 190
P + W RY+ F++LYP G++ E+ IY ALP+++++ Y + +PNK+NFSFDY+ I
Sbjct: 160 LPYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYYAFLI 219
Query: 191 LVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 221
L++ Y+P P +Y +M+ QR+K LS +++
Sbjct: 220 LIMISYIPIFPQLYFHMIHQRRKILSHTEEH 250
>sp|Q9N1R5|HACD1_SHEEP Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Ovis aries GN=PTPLA PE=2 SV=1
Length = 288
Score = 160 bits (404), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 133/212 (62%), Gaps = 2/212 (0%)
Query: 5 LSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESG-HENVYKAVERPLQLAQTAAVLEIL 63
L LL ++LT YN + AGW + ++ E G H+ +YK++++ L+ QT A+LEI+
Sbjct: 68 LGLLATIWLTFYNIAMTAGWLVLAIAMVRFYMEKGTHKGLYKSIQKTLKFFQTFALLEIV 127
Query: 64 HGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFG 123
H L+G+V + + Q+SSR+++ W + S QN V +++W++TEI RYSF+
Sbjct: 128 HCLIGIVPTSVLVAGVQVSSRIFMVWLVTHSIKPIQNEESVVLFLVAWTVTEITRYSFYT 187
Query: 124 MKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSF 183
L P ++ W RY+ F++LYP G+ E+ IY ALPY+K++ + +R+PNK+N SF
Sbjct: 188 F-SLLDHLPYFIKWARYNFFIILYPVGVAGELLTIYAALPYVKKTGMFSIRLPNKYNVSF 246
Query: 184 DYFYAAILVLGFYVPGSPHMYTYMLGQRKKAL 215
DY+Y ++ + Y+P P +Y +ML QR+K L
Sbjct: 247 DYYYFLLITMASYIPLFPQLYFHMLRQRRKVL 278
>sp|B0YJ81|HACD1_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Homo sapiens GN=PTPLA PE=1 SV=1
Length = 288
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 132/212 (62%), Gaps = 2/212 (0%)
Query: 5 LSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESG-HENVYKAVERPLQLAQTAAVLEIL 63
L +L +LT Y+ + AGW + ++ E G H +YK++++ L+ QT A+LEI+
Sbjct: 68 LGVLATAWLTFYDIAMTAGWLVLAIAMVRFYMEKGTHRGLYKSIQKTLKFFQTFALLEIV 127
Query: 64 HGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFG 123
H L+G+V + + T Q+SSR+++ W I S QN V +++W++TEI RYSF+
Sbjct: 128 HCLIGIVPTSVIVTGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVAWTVTEITRYSFYT 187
Query: 124 MKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSF 183
L P ++ W RY+ F++LYP G+ E+ IY ALP++K++ + +R+PNK+N SF
Sbjct: 188 FS-LLDHLPYFIKWARYNFFIILYPVGVAGELLTIYAALPHVKKTGMFSIRLPNKYNVSF 246
Query: 184 DYFYAAILVLGFYVPGSPHMYTYMLGQRKKAL 215
DY+Y ++ + Y+P P +Y +ML QR+K L
Sbjct: 247 DYYYFLLITMASYIPLFPQLYFHMLRQRRKVL 278
>sp|O17040|HACD_CAEEL Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase hpo-8 OS=Caenorhabditis elegans GN=hpo-8
PE=3 SV=2
Length = 218
Score = 150 bits (378), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 127/211 (60%), Gaps = 1/211 (0%)
Query: 12 YLTAYNWTVFAGWAQVLYLALKTL-NESGHENVYKAVERPLQLAQTAAVLEILHGLLGLV 70
YL AYN GW+ +L + L N +Y++VE L++ QTAA+LE++H ++GLV
Sbjct: 6 YLVAYNVLQILGWSAILVKTVLGLANGLTWPQLYESVEFELKIFQTAAILEVIHAIVGLV 65
Query: 71 RSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGF 130
RSP+ T Q++SR+ + W IL + I V L+++WS+TE+IRYSF+ +
Sbjct: 66 RSPVGTTAMQVTSRVVLVWPILHLCSTARFSIGVPLLLVAWSVTEVIRYSFYALSVLKQP 125
Query: 131 APSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAI 190
P +LL+LRY+ F +LYP G++ E+ ++ +L + E + L MPN+ N +++ I
Sbjct: 126 IPYFLLYLRYTLFYVLYPMGVSGELLTLFASLNEVDEKKILTLEMPNRLNMGISFWWVLI 185
Query: 191 LVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 221
+ Y+PG P +Y YM+GQRKK L K+
Sbjct: 186 IAALSYIPGFPQLYFYMIGQRKKILGGGSKK 216
>sp|P40857|PHS1_YEAST Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase PHS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PHS1 PE=1 SV=1
Length = 217
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 110/209 (52%), Gaps = 19/209 (9%)
Query: 12 YLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVR 71
+L YN GW+ +LYL + + G + + L Q A++EI++ LG+VR
Sbjct: 11 FLPLYNLLSAVGWSYLLYLVISLYPKVGQPAFFYQTKNVATLVQCGAIIEIINSFLGVVR 70
Query: 72 SPITATLPQISSRLYVTWGILWSFPQTQ--NHILVSSLVISWSLTEIIRY-SFFGMKEAL 128
SP+ T+ Q+SSRL V GI P T ++ SL+++WS+TEI+RY +F M
Sbjct: 71 SPLLTTVAQVSSRLLVVLGIFQLLPNTSGVQSVVYISLLLAWSITEIVRYLYYFFMLVFK 130
Query: 129 GFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYA 188
AP L+ LRY+ F +LYP+G+ SE+ +IY AL N + Y
Sbjct: 131 NGAPKILILLRYNLFWILYPTGVASELRIIYCAL--------------NAAESQYSLLYK 176
Query: 189 AILVLGF--YVPGSPHMYTYMLGQRKKAL 215
IL+ Y+PG P ++ +M+ QRKK +
Sbjct: 177 RILIAAMLAYIPGFPMLFLHMVAQRKKVM 205
>sp|O14346|HACD_SCHPO Probable very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPBC19C2.15c PE=3 SV=2
Length = 208
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 96/172 (55%), Gaps = 15/172 (8%)
Query: 43 VYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQT-QNH 101
V+ ++ QT A+ E+ H + GLV S T+ Q++SRLY+ WG+ + F +
Sbjct: 41 VFHETNTLVRWVQTLAIAEVFHSIFGLVSSSPLTTIIQVASRLYLVWGVCYPFSYVIEGS 100
Query: 102 ILVSSLVISWSLTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTA 161
+ S++I+WS+TEIIRY+F+ G P++L WLRY+TFL+LYP G SE L+ +
Sbjct: 101 PIYLSMIIAWSITEIIRYAFYAFNLN-GDIPAFLTWLRYNTFLILYPIGAGSEFLLVLKS 159
Query: 162 LPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKK 213
R+ ++ +S + IL + Y PG MYT+ML QR+K
Sbjct: 160 ------------RIAAQYVWSLNKLLWPIL-MSIYPPGLYIMYTHMLAQRRK 198
>sp|Q5ZM57|HACD_CHICK Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Gallus gallus GN=PTPLAD1 PE=2 SV=1
Length = 362
Score = 94.7 bits (234), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 14/222 (6%)
Query: 8 LRRLYLTAYNWTVFAGWAQV---LYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILH 64
L++ YL YN F G++ + + + L L + + + + + QT A++EIL+
Sbjct: 145 LKKGYLIMYNLVQFLGFSWIFVNMTVRLFILGKDSFYDTFHTIADMMYFCQTLALMEILN 204
Query: 65 GLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGM 124
L+GLVRSP+ + Q+ R ++ + +L S + Q+ +V L WS+ E+ RY ++ M
Sbjct: 205 SLIGLVRSPLIPAVIQVFGRNFILFVVLGSLEEMQSKAVVFFLFYFWSIIELFRYPYY-M 263
Query: 125 KEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFD 184
+G L WLRY++++ LYP G +E + ++P E+ + L +PN N +
Sbjct: 264 LSCMGIEWKPLTWLRYTSWIPLYPLGGLAEAVCLIQSIPIFSETGKFSLGLPNPLNVTIQ 323
Query: 185 Y-----FYAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 221
+ Y L LG +V + Y+ QRK+ L K++
Sbjct: 324 FSFLLQMYLIALFLGLFV-----NFRYLYKQRKQHLGPKKRK 360
>sp|A7YY55|HACD3_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Bos taurus GN=PTPLAD1 PE=2 SV=1
Length = 362
Score = 80.5 bits (197), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 107/225 (47%), Gaps = 14/225 (6%)
Query: 5 LSLLRRLYLTAYNWTVFAGWAQV---LYLALKTLNESGHENVYKAVERPLQLAQTAAVLE 61
L+ L++ YL YN F G++ + + + L + + + V + Q A +E
Sbjct: 142 LTSLKKGYLFMYNLVQFLGFSWIFVNMTVRFFILGKESFYDTFHTVADMMYFCQMLAAVE 201
Query: 62 ILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSF 121
++ +G+ +SP+ +L Q+ R ++ + I + + QN +V + WS EI RY F
Sbjct: 202 SINAAIGVTKSPVVPSLFQLLGRNFILFIIFGTMEEMQNKAVVFFVFYIWSTVEIFRYPF 261
Query: 122 FGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESE--TYCLRMPNKW 179
+ M + L WLRY+ ++ LYP G +E + ++P E+ ++ L P K
Sbjct: 262 Y-MLSCIDMDWKVLTWLRYTVWIPLYPMGCLAEAVSVIQSIPVFNETGRFSFTLPYPVKI 320
Query: 180 NFSFDYF---YAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 221
F +F Y +L LG YV + Y+ QR++ + KK+
Sbjct: 321 KVRFSFFLQIYLILLFLGLYVN-----FRYLYKQRRRRFGQKKKK 360
>sp|Q5NVQ2|PTAD1_PONAB Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Pongo abelii GN=PTPLAD1 PE=2 SV=1
Length = 364
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 14/225 (6%)
Query: 5 LSLLRRLYLTAYNWTVFAGWAQV---LYLALKTLNESGHENVYKAVERPLQLAQTAAVLE 61
L+ LR+ YL YN F G++ + L + L + + + V + Q AV+E
Sbjct: 144 LTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGKESFYDTFHTVADMMYFCQMLAVVE 203
Query: 62 ILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSF 121
++ +G+ SP+ +L Q+ R ++ + I + + QN +V + WS EI RYSF
Sbjct: 204 TINAAIGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQNKAVVFFVFYLWSAIEIFRYSF 263
Query: 122 FGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESE--TYCLRMPNKW 179
+ M + L WLRY+ ++ LYP G +E + ++P E+ ++ L P K
Sbjct: 264 Y-MLTCIDMDWEVLTWLRYTLWIPLYPLGCLAEAVSVVQSIPIFNETGRFSFTLPYPVKI 322
Query: 180 NFSFDYF---YAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 221
F +F Y ++ LG Y+ + ++ QR++ + KK+
Sbjct: 323 KVRFSFFLQIYLIMIFLGLYIN-----FRHLYKQRRRRYGQKKKK 362
>sp|Q9P035|HACD3_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Homo sapiens GN=PTPLAD1 PE=1 SV=2
Length = 362
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 14/225 (6%)
Query: 5 LSLLRRLYLTAYNWTVFAGWAQV---LYLALKTLNESGHENVYKAVERPLQLAQTAAVLE 61
L+ LR+ YL YN F G++ + L + L + + + V + Q AV+E
Sbjct: 142 LTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGKESFYDTFHTVADMMYFCQMLAVVE 201
Query: 62 ILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSF 121
++ +G+ SP+ +L Q+ R ++ + I + + QN +V + WS EI RYSF
Sbjct: 202 TINAAIGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQNKAVVFFVFYLWSAIEIFRYSF 261
Query: 122 FGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESE--TYCLRMPNKW 179
+ M + L WLRY+ ++ LYP G +E + ++P E+ ++ L P K
Sbjct: 262 Y-MLTCIDMDWKVLTWLRYTLWIPLYPLGCLAEAVSVIQSIPIFNETGRFSFTLPYPVKI 320
Query: 180 NFSFDYF---YAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 221
F +F Y ++ LG Y+ + ++ QR++ + KK+
Sbjct: 321 KVRFSFFLQIYLIMIFLGLYIN-----FRHLYKQRRRRYGQKKKK 360
>sp|Q8K2C9|HACD3_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Mus musculus GN=ptplad1 PE=1 SV=2
Length = 362
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 105/225 (46%), Gaps = 14/225 (6%)
Query: 5 LSLLRRLYLTAYNWTVFAGWAQV---LYLALKTLNESGHENVYKAVERPLQLAQTAAVLE 61
L+ L++ YL YN G++ + L + L + + + V + Q A++E
Sbjct: 142 LTNLKKGYLFMYNLVQLLGFSWIFVNLTVRFFILGKESFYDTFHNVADMMYFCQMLALVE 201
Query: 62 ILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSF 121
L+ +G+ +P+ L Q R ++ + + + + QN +V + SWS EI RY F
Sbjct: 202 TLNAAIGVTSTPVLPALIQFLGRNFILFLVFGTMEEMQNKAVVFFVFYSWSAIEIFRYPF 261
Query: 122 FGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESE--TYCLRMPNKW 179
+ M + L WLRY+ ++ LYP G SE + ++P ES ++ L P K
Sbjct: 262 Y-MLSCIDMDWKVLTWLRYTMWIPLYPLGCLSEAVAVIQSIPVFNESGRFSFTLPYPVKM 320
Query: 180 NFSFDYF---YAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 221
F +F Y +L LG Y+ + ++ QR++ + KK+
Sbjct: 321 KVRFSFFLQVYLVMLFLGLYIN-----FRHLYKQRRRRYGQKKKK 360
>sp|A2AKM2|HACD4_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 4 OS=Mus musculus GN=Ptplad2 PE=2 SV=2
Length = 232
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 106/213 (49%), Gaps = 12/213 (5%)
Query: 9 RRLYLTAYNWTVFAGWAQVL---YLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHG 65
+ +YL Y F G + +L + + + + + A+ +++ Q+ ++LE+LH
Sbjct: 16 KNVYLFIYYLIQFCGHSWILANMTVRFFSFGKDSMADTFYAIGLVMRVCQSISLLELLHI 75
Query: 66 LLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMK 125
+G+ + + Q++ R+ + +G++ S + Q +V L I W+L +++RY+ + M
Sbjct: 76 YIGIESNQLFPRFLQLTERVIILFGVITSQEEVQEKCVVCVLFILWNLLDMVRYT-YSML 134
Query: 126 EALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDY 185
+G + + L WL + ++ +YP + +E IY +LPY + T +P + F Y
Sbjct: 135 SVIGTSYAALTWLSQTLWMPIYPLCVLAEAFTIYQSLPYFESFGTNSTVLPFDLSTCFPY 194
Query: 186 ---FYAAILVLGFYVPGSPHMYTYMLGQRKKAL 215
Y +L +G Y S H+YT +RK L
Sbjct: 195 VLKLYLMMLFIGMYFTYS-HLYT----ERKDFL 222
>sp|Q5VWC8|HACD4_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 4 OS=Homo sapiens GN=PTPLAD2 PE=1 SV=1
Length = 232
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 98/194 (50%), Gaps = 13/194 (6%)
Query: 34 TLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILW 93
+ + + + A+ ++L Q+ ++LE+LH +G+ + + Q++ R+ + + ++
Sbjct: 44 SFGKDSMVDTFYAIGLVMRLCQSVSLLELLHIYVGIESNHLLPRFLQLTERIIILFVVIT 103
Query: 94 SFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITS 153
S + Q +V L + W+L +++RY+ + M +G + + L WL + ++ +YP + +
Sbjct: 104 SQEEVQEKYVVCVLFVFWNLLDMVRYT-YSMLSVIGISYAVLTWLSQTLWMPIYPLCVLA 162
Query: 154 EVGLIYTALPYIKESETYCLRMPNKWNFSFDY---FYAAILVLGFYVPGSPHMYTYMLGQ 210
E IY +LPY + TY ++P + F Y Y +L +G Y Y+++ +
Sbjct: 163 EAFAIYQSLPYFESFGTYSTKLPFDLSIYFPYVLKIYLMMLFIGMYFT-----YSHLYSE 217
Query: 211 RKKALS----KSKK 220
R+ L K KK
Sbjct: 218 RRDILGIFPIKKKK 231
>sp|Q6GNB5|HACD_XENLA Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Xenopus laevis GN=ptplad2 PE=2 SV=1
Length = 218
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 92/186 (49%), Gaps = 1/186 (0%)
Query: 35 LNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWS 94
+ + + ++ +Q Q ++LE+ H LLG+ ++ Q++ R + + ++ S
Sbjct: 30 FGQDAFADTFYSIGLVMQGCQLLSILELAHILLGVEQNGFLPMFLQVAERFIILFVVITS 89
Query: 95 FPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSE 154
+ Q+ +V +L W+L ++IRY + M A+ S L WLR++ +++ YP + +E
Sbjct: 90 QEEVQSKYIVCALFFIWNLWDVIRYPY-DMLAAVDTDYSALTWLRHTWWIVAYPLSVLAE 148
Query: 155 VGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKA 214
IY +LPY + TY +M + SF + Y L L G ++ + + +RK+
Sbjct: 149 AYTIYESLPYFESLGTYSFKMALPVSLSFHFPYILTLYLVLQPVGMLYICSCLWSERKQY 208
Query: 215 LSKSKK 220
+ K
Sbjct: 209 FQRKLK 214
>sp|Q7SY06|HADC_DANRE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Danio rerio GN=ptplad1 PE=2 SV=2
Length = 359
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 93/198 (46%), Gaps = 9/198 (4%)
Query: 8 LRRLYLTAYNWTVFAGWAQV---LYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILH 64
L++ +L YN F G++ + + + L L + + + + + Q A++E+++
Sbjct: 142 LKKGFLFMYNLVQFLGYSWIFVNMTVRLFILGQDSFYDTFHTIADVMYFCQMLAIMEVIN 201
Query: 65 GLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGM 124
+GLV++ + Q+ R ++ + I S QN +V + WS EI RY F+ M
Sbjct: 202 PAVGLVKTGVMPAFIQVMGRNFILFVIFGSLEDMQNKPVVFFVFYLWSTIEIFRYPFY-M 260
Query: 125 KEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFD 184
+ L WLRY+ ++ LYP G+ +E + ++P E++ + +P S
Sbjct: 261 LACIDTEWKLLTWLRYTIWMPLYPLGVLAEAVAVIQSIPIFDETKLLSIPLPKATGLSLS 320
Query: 185 Y-----FYAAILVLGFYV 197
+ Y ++ LG ++
Sbjct: 321 FSYILQLYLVVMFLGLFI 338
>sp|Q0P5C7|HACD4_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 4 OS=Bos taurus GN=PTPLAD2 PE=2 SV=1
Length = 231
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 94/185 (50%), Gaps = 9/185 (4%)
Query: 34 TLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILW 93
+ + + + A+ +QL Q+ ++LE+LH +G+ + + + Q++ R+ V + ++
Sbjct: 44 SFGKDSMVDTFYAIGLVMQLCQSISLLELLHIYVGIESNHLLPRILQLTERIIVLFMVIT 103
Query: 94 SFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITS 153
S + Q +V L I +L +++RY++ M +G + + L W + ++ +YP + +
Sbjct: 104 SQEEVQEKYVVCVLFIFRNLLDMVRYTY-SMLSVIGISYAVLTWFSQTLWMPIYPLCVLA 162
Query: 154 EVGLIYTALPYIKESETYCLRMPNKWNFSFDY---FYAAILVLGFYVPGSPHMYTYMLGQ 210
E IY +LPY + TY ++P +F F Y Y +L +G Y Y ++ +
Sbjct: 163 EAFTIYQSLPYFESFGTYSTKLPFDLSFYFPYVLKIYLMMLFVGMYFT-----YNHLYSE 217
Query: 211 RKKAL 215
R+ L
Sbjct: 218 RRDIL 222
>sp|A1KZ92|PXDNL_HUMAN Peroxidasin-like protein OS=Homo sapiens GN=PXDNL PE=1 SV=3
Length = 1463
Score = 31.2 bits (69), Expect = 5.4, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 27 VLYLALKTLNE--SGHENVYKAVERPLQLAQTAAVLEILHGLLGLV---RSPITATLPQI 81
+LY TL E GH +KA+ P ++ + + +L GL G+ R+P P++
Sbjct: 1063 ILYRLNATLGEISEGHLPFHKALFSPSRIIKEGGIDPVLRGLFGVAAKWRAPSYLLSPEL 1122
Query: 82 SSRLY 86
+ RL+
Sbjct: 1123 TQRLF 1127
>sp|Q9GZN6|S6A16_HUMAN Orphan sodium- and chloride-dependent neurotransmitter transporter
NTT5 OS=Homo sapiens GN=SLC6A16 PE=2 SV=1
Length = 736
Score = 31.2 bits (69), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 83/203 (40%), Gaps = 48/203 (23%)
Query: 5 LSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILH 64
++LL L T++N+ V WA V+ ++ ER EIL
Sbjct: 380 INLLTLLVFTSFNFCVLGFWATVI--------------THRCCERNA---------EILL 416
Query: 65 GLLGLVRSPITATLPQI----SSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIR-- 118
L+ L + P A P + +Y W L PQ +++ + T+ ++
Sbjct: 417 KLINLGKLPPDAKPPVNLLYNPTSIYNAW--LSGLPQHIKSMVLREVTECNIETQFLKAS 474
Query: 119 ----YSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLR 174
++F EA+ F P + W + FL+L G++S +G++ + ++++
Sbjct: 475 EGPKFAFLSFVEAMSFLPPSVFW-SFIFFLMLLAMGLSSAIGIMQGIITPLQDT------ 527
Query: 175 MPNKWNFSFDYFYAAILVLGFYV 197
FSF + +L++G ++
Sbjct: 528 ------FSFFRKHTKLLIVGVFL 544
>sp|Q9P7R8|YHV3_SCHPO Uncharacterized protein C211.03 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPBC211.03c PE=1 SV=1
Length = 1462
Score = 31.2 bits (69), Expect = 5.9, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Query: 24 WAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISS 83
W +++ +A+K + G E++ + +E V ILHG G + P P+I
Sbjct: 1364 WLKLMDVAIKLSSIHGSESMAEVME------SIKNVFMILHGA-GALAGPTIEVDPEIPD 1416
Query: 84 RLYVTWGILWS-----FPQTQNHILVSS 106
L TW W+ +P+ N + +++
Sbjct: 1417 HLIKTWNTTWNNLFIYYPELSNDLNINN 1444
>sp|P31135|POTH_ECOLI Putrescine transport system permease protein PotH OS=Escherichia
coli (strain K12) GN=potH PE=1 SV=1
Length = 317
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 87 VTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGFAPSWLLWLRY-STFLL 145
+ W + S P T+N +L+ ++ SW+ I Y++ G+ + G ++LLWL L
Sbjct: 120 LAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKNNGVLNNFLLWLGVIDQPLT 179
Query: 146 LYPSGITSEVGLIYTALPYI 165
+ + + +G++Y +P++
Sbjct: 180 ILHTNLAVYIGIVYAYVPFM 199
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,452,649
Number of Sequences: 539616
Number of extensions: 3058581
Number of successful extensions: 8671
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 8611
Number of HSP's gapped (non-prelim): 39
length of query: 221
length of database: 191,569,459
effective HSP length: 113
effective length of query: 108
effective length of database: 130,592,851
effective search space: 14104027908
effective search space used: 14104027908
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)