Query 027623
Match_columns 221
No_of_seqs 197 out of 1648
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 21:39:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027623.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027623hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dto_A BH2835 protein; all alp 100.0 4.3E-58 1.5E-62 376.8 21.1 210 2-220 4-214 (223)
2 3djb_A Hydrolase, HD family; a 100.0 5.3E-58 1.8E-62 376.4 17.9 209 3-220 5-214 (223)
3 2pjq_A Uncharacterized protein 100.0 4E-52 1.4E-56 343.8 19.9 211 2-220 9-220 (231)
4 2qgs_A Protein Se1688; alpha-h 100.0 5.2E-52 1.8E-56 341.9 18.9 209 2-220 4-215 (225)
5 3gw7_A Uncharacterized protein 100.0 2.8E-53 9.7E-58 351.2 2.1 202 4-220 6-215 (239)
6 3b57_A LIN1889 protein; Q92AN1 100.0 3.8E-49 1.3E-53 321.4 19.7 198 2-220 4-202 (209)
7 2pq7_A Predicted HD superfamil 100.0 3.1E-44 1E-48 294.5 17.6 201 2-219 12-219 (220)
8 2cqz_A 177AA long hypothetical 99.7 1.2E-16 4.1E-21 126.2 7.3 134 20-202 29-172 (177)
9 2hek_A Hypothetical protein; p 99.4 1.3E-12 4.6E-17 114.0 8.8 106 22-146 49-175 (371)
10 3ccg_A HD superfamily hydrolas 99.3 7.4E-12 2.5E-16 99.6 10.8 106 5-130 5-133 (190)
11 2o08_A BH1327 protein; putativ 99.3 3.9E-12 1.3E-16 101.1 8.6 106 5-130 4-131 (188)
12 2ogi_A Hypothetical protein SA 99.2 4.6E-11 1.6E-15 95.5 10.2 106 6-130 13-139 (196)
13 3tm8_A BD1817, uncharacterized 98.8 3.1E-08 1.1E-12 85.1 12.1 107 22-134 165-292 (328)
14 2dqb_A Deoxyguanosinetriphosph 98.8 5.1E-08 1.7E-12 85.0 10.9 101 24-133 76-202 (376)
15 3hc1_A Uncharacterized HDOD do 98.7 1.8E-08 6.1E-13 85.6 7.9 98 25-134 120-245 (305)
16 2q14_A Phosphohydrolase; BT420 98.6 4.9E-07 1.7E-11 79.6 11.5 97 23-133 55-169 (410)
17 1xx7_A Oxetanocin-like protein 98.4 2.2E-06 7.4E-11 67.6 9.3 129 21-202 35-177 (184)
18 3m1t_A Putative phosphohydrola 98.3 1.3E-06 4.4E-11 73.1 8.3 94 24-131 106-226 (275)
19 3i7a_A Putative metal-dependen 98.3 2.8E-06 9.7E-11 71.1 10.4 96 24-130 118-236 (281)
20 1vqr_A Hypothetical protein CJ 98.3 1.2E-06 4.2E-11 73.9 6.2 97 24-132 125-250 (297)
21 3ljx_A MMOQ response regulator 98.1 3.9E-06 1.3E-10 70.6 6.9 98 24-132 109-232 (288)
22 3u1n_A SAM domain and HD domai 98.1 8.8E-06 3E-10 73.3 9.4 118 23-148 65-229 (528)
23 3rf0_A Exopolyphosphatase; str 98.1 5.5E-05 1.9E-09 60.7 13.3 82 22-105 18-106 (209)
24 3irh_A HD domain protein; phos 98.0 1.3E-05 4.4E-10 71.5 8.6 105 24-146 87-221 (480)
25 2paq_A 5'-deoxynucleotidase YF 98.0 3.7E-05 1.3E-09 61.4 10.4 101 23-144 31-151 (201)
26 4dmb_A HD domain-containing pr 97.9 9.1E-05 3.1E-09 59.1 10.9 141 21-210 43-195 (204)
27 3mem_A Putative signal transdu 97.9 3E-05 1E-09 69.3 8.4 97 23-129 278-403 (457)
28 3kh1_A Predicted metal-depende 97.8 0.00017 6E-09 57.3 10.1 101 25-145 42-154 (200)
29 1u6z_A Exopolyphosphatase; alp 97.6 0.00054 1.8E-08 62.1 11.9 82 22-105 327-415 (513)
30 1ynb_A Hypothetical protein AF 97.4 0.00079 2.7E-08 52.3 8.8 37 23-64 38-77 (173)
31 3hi0_A Putative exopolyphospha 97.4 0.00091 3.1E-08 60.5 10.6 92 4-104 318-412 (508)
32 3mzo_A LIN2634 protein; HD-dom 97.3 0.0059 2E-07 49.0 13.2 103 23-145 30-151 (216)
33 1f0j_A PDE4B, phosphodiesteras 97.1 0.0017 5.9E-08 56.5 8.5 61 7-67 64-129 (377)
34 1y2k_A DPDE3, PDE43, CAMP-spec 97.0 0.0021 7.2E-08 55.4 8.5 61 7-67 77-142 (349)
35 2our_A CAMP and CAMP-inhibited 97.0 0.0032 1.1E-07 53.8 9.6 96 7-102 62-188 (331)
36 1tbf_A CGMP-specific 3',5'-cyc 97.0 0.0065 2.2E-07 52.2 11.3 61 7-67 82-147 (347)
37 2r8q_A Class I phosphodiestera 97.0 0.0052 1.8E-07 53.1 10.5 61 7-67 82-146 (359)
38 1taz_A Calcium/calmodulin-depe 96.8 0.0066 2.3E-07 52.5 9.5 49 19-67 78-128 (365)
39 1zkl_A HCP1, TM22, high-affini 96.7 0.007 2.4E-07 52.2 8.7 61 7-67 64-129 (353)
40 3bg2_A DGTP triphosphohydrolas 96.6 0.0018 6.1E-08 57.5 5.0 45 24-68 65-123 (444)
41 3sk9_A Putative uncharacterize 96.6 0.0077 2.6E-07 49.8 8.1 79 25-104 27-144 (265)
42 3bjc_A CGMP-specific 3',5'-cyc 96.0 0.032 1.1E-06 53.5 10.3 60 7-66 597-661 (878)
43 2pgs_A Putative deoxyguanosine 96.0 0.0036 1.2E-07 55.7 3.1 45 24-68 63-116 (451)
44 2gz4_A Hypothetical protein AT 96.0 0.013 4.4E-07 46.7 6.1 35 24-66 56-90 (207)
45 3kq5_A Hypothetical cytosolic 95.9 0.0071 2.4E-07 52.3 4.5 39 25-66 77-118 (393)
46 3qi3_A High affinity CGMP-spec 95.6 0.078 2.7E-06 47.8 10.2 60 8-67 235-298 (533)
47 3aql_A Poly(A) polymerase; tra 95.4 0.019 6.5E-07 50.5 5.5 53 51-103 286-351 (415)
48 3itu_A CGMP-dependent 3',5'-cy 95.2 0.03 1E-06 48.0 6.0 60 7-66 64-127 (345)
49 3v93_A Cyclic nucleotide speci 95.1 0.029 1E-06 48.1 5.7 62 6-67 80-146 (345)
50 1vfg_A A-adding enzyme, poly A 94.9 0.03 1E-06 48.7 5.2 45 49-103 254-298 (390)
51 3hr1_A CAMP and CAMP-inhibited 94.8 0.05 1.7E-06 47.2 6.3 60 7-66 93-154 (380)
52 3dyn_A High affinity CGMP-spec 94.8 0.029 9.8E-07 47.8 4.7 49 19-67 71-121 (329)
53 3m5f_A Metal dependent phospho 94.2 0.15 5E-06 41.5 7.4 81 25-105 18-126 (244)
54 3g4g_A DPDE3, PDE43, CAMP-spec 93.9 0.069 2.3E-06 47.0 5.3 61 7-67 143-208 (421)
55 3ecm_A High affinity CAMP-spec 93.8 0.044 1.5E-06 46.8 3.7 60 8-67 57-121 (338)
56 1miw_A TRNA CCA-adding enzyme; 93.6 0.078 2.7E-06 46.4 5.0 43 52-104 248-290 (404)
57 3ibj_A CGMP-dependent 3',5'-cy 93.4 0.12 4.1E-06 48.1 6.3 60 7-66 425-488 (691)
58 2ibn_A Inositol oxygenase; red 91.3 0.18 6E-06 40.8 3.9 42 19-66 52-93 (250)
59 1ou5_A TRNA CCA-adding enzyme, 90.0 0.08 2.7E-06 47.0 0.9 42 51-104 305-346 (448)
60 1so2_A CGMP-inhibited 3',5'-cy 89.9 0.39 1.3E-05 42.2 5.2 35 6-40 65-101 (420)
61 3nr1_A HD domain-containing pr 75.8 4.4 0.00015 31.0 5.2 56 3-66 5-65 (178)
62 1vj7_A Bifunctional RELA/SPOT; 74.1 5.6 0.00019 34.5 5.9 54 3-66 26-82 (393)
63 3nqw_A CG11900; stringent resp 73.1 5 0.00017 30.7 4.9 56 3-66 7-67 (179)
64 3sk7_A Protein SEQA; sequestra 64.6 5.8 0.0002 28.2 3.3 23 76-98 93-115 (116)
65 1j3e_A SEQA protein; protein-D 64.2 4.8 0.00016 28.6 2.8 24 76-99 92-115 (115)
66 2huo_A Inositol oxygenase; pro 64.1 7.2 0.00025 32.0 4.2 43 18-66 90-132 (289)
67 1lrr_A SEQA protein; protein-D 62.9 5.2 0.00018 29.1 2.8 24 76-99 108-131 (131)
68 3fmt_A Protein SEQA; protein-D 51.6 13 0.00045 27.9 3.4 24 76-99 139-162 (162)
69 1wpn_A Manganese-dependent ino 49.8 22 0.00075 26.8 4.7 43 50-92 137-180 (188)
70 3dma_A Exopolyphosphatase-rela 44.0 59 0.002 27.2 6.9 42 50-92 165-207 (343)
71 2frh_A SARA, staphylococcal ac 35.7 38 0.0013 23.5 3.8 28 191-218 99-126 (127)
72 3dev_A SH1221; alpha-beta prot 30.1 1.1E+02 0.0037 25.3 6.2 42 50-92 146-188 (320)
73 1tbx_A ORF F-93, hypothetical 27.9 78 0.0027 20.6 4.2 28 191-218 69-96 (99)
74 1k20_A Manganese-dependent ino 27.6 74 0.0025 26.0 4.8 43 50-92 138-181 (310)
75 3h38_A TRNA nucleotidyl transf 26.2 61 0.0021 28.3 4.1 43 50-102 278-320 (441)
76 2haw_A Manganese-dependent ino 26.1 82 0.0028 25.7 4.8 43 50-92 137-180 (309)
77 2k89_A PLA2P, PLAP, phospholip 23.5 57 0.002 21.4 2.6 28 76-103 43-70 (80)
78 2h5n_A Hypothetical protein PG 20.5 2.3E+02 0.0078 19.9 5.9 51 49-99 14-64 (133)
No 1
>3dto_A BH2835 protein; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Bacillus halodurans} SCOP: a.211.1.1
Probab=100.00 E-value=4.3e-58 Score=376.81 Aligned_cols=210 Identities=38% Similarity=0.636 Sum_probs=178.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCCCCCCCchHH-HHHHH
Q 027623 2 ESRVRKAEKLVERSMKGNDASHDASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDYKYLRDPSEE-KIVEN 80 (221)
Q Consensus 2 ~~~i~~~~~~~~~~~~~~~~~H~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~~~~~~~~~~-~~a~~ 80 (221)
+++|+++++||+++|.+++++|++.|+.||+.+|..|+..++ .|++++.+||||||||+.++..+...+ ..+.+
T Consensus 4 ~~~i~~~~~~v~~~l~~~~~~H~~~H~~rV~~~a~~ia~~~~-----~d~~~l~~AalLHDig~~k~~~~~~~ga~~a~~ 78 (223)
T 3dto_A 4 QAILQSAEAWVKKQLMDEYSGHDWYHIRRVTLMAKAIGEQEK-----VDVFVVQIAALFHDLIDDKLVDDPETAKQQLID 78 (223)
T ss_dssp HHHHHHHHHHHHHTTTTC----CHHHHHHHHHHHHHHHHHTT-----CCHHHHHHHHHHHSTTC-------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHHHcC-----CCHHHHHHHHHHhhccccccCCCHHHHHHHHHH
Confidence 368999999999999989999999999999999999999887 799999999999999998765443444 89999
Q ss_pred HHhhCCCCHHHHHHHHHHHHHhcCCcccccccCCCCChhhhhhhhhhhhhhhhhhHHHHHHhhhcccCCccCCCCCCCCC
Q 027623 81 FLEDEGLEESKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQDADRLDAIGAIGIARCFTFGGSRNRVLHDPAIKPRS 160 (221)
Q Consensus 81 ~L~~~g~~~~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~DAD~LD~lGa~gi~R~~~y~~~~~~~~~~~~~~~~~ 160 (221)
+|.+.|+|++.++.|+++|.+|+++.+.++ .|.+++++||+|||+||+||++||+|||.|+|.+|+++|+|++||+.
T Consensus 79 ~L~~~g~~~~~i~~V~~~I~~Hs~~~~~~~---~p~tlEa~IV~dADrLDalGaiGiaR~f~~~g~~~~~~~~p~~~~~~ 155 (223)
T 3dto_A 79 WMEAAGVPSQKIDHTMDIINTISFKGGHGQ---SLATREAMVVQDADRLDALGAIGIARTFAYSGNKGQPIYDPELPIRE 155 (223)
T ss_dssp HHHTTTCCHHHHHHHHHHHHCC-------------CCHHHHHHHHHHHGGGSSHHHHHHHHHHHHHHTCCSCCTTSCCCC
T ss_pred HHHHcCCCHHHHHHHHHHHHHcCCccCCCC---CCCCHHHHHHHhHHHHHHHHhhHHHHHHHHHHHcCCcccCccccccc
Confidence 999999999999999999999999875422 58899999999999999999999999999999999999999999999
Q ss_pred cccHHHhhhhccccHHHHHHHHHhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 027623 161 DVSKEQYMKKEEQTTVNHFHEKLLKLKDLMKTEAGQRRAEKRHKFMEEFLMEFYEEWDGK 220 (221)
Q Consensus 161 ~~~~~~y~~~~~~~~i~hf~ekll~l~~~~~T~~~r~~a~~r~~~~~~f~~~~~~E~~~~ 220 (221)
.++.++| +....++|+||||||++|++.|+|++||++|++|++||++|+++|.+||+|.
T Consensus 156 ~~~~~~y-r~~~~~~i~Hf~eKLl~l~~~m~T~~gr~~A~~R~~~m~~fl~~~~~E~~~~ 214 (223)
T 3dto_A 156 TMTVEEY-RHGKSTAINHFYEKLFKLKDLMNTETGKQLAKERHVFMEQFIERFLSEWNGD 214 (223)
T ss_dssp C--SHHH-HTCCCCHHHHHHHTGGGCTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred cccHHHh-hccchhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 9999999 6677899999999999999999999999999999999999999999999985
No 2
>3djb_A Hydrolase, HD family; all alpha-helical protein., structural genomics, PSI-2, protein structure initiative; 2.90A {Bacillus thuringiensis serovarkonkukian} SCOP: a.211.1.1
Probab=100.00 E-value=5.3e-58 Score=376.40 Aligned_cols=209 Identities=43% Similarity=0.726 Sum_probs=174.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCCCCCCCchHH-HHHHHH
Q 027623 3 SRVRKAEKLVERSMKGNDASHDASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDYKYLRDPSEE-KIVENF 81 (221)
Q Consensus 3 ~~i~~~~~~~~~~~~~~~~~H~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~~~~~~~~~~-~~a~~~ 81 (221)
++|+++++||+++|.+++++|++.|+.||+.+|..|+..++ .|++++.+||||||||+.++..+...+ ..++++
T Consensus 5 ~~i~~~~~~v~~~l~~~~~~H~~~H~~rV~~~a~~ia~~~~-----~d~~~l~~AAlLHDig~~k~~~h~~~ga~~a~~~ 79 (223)
T 3djb_A 5 EKIEKTITFVKHILEKDASGHDWYHIRRVHKMAISLSEQEG-----GNRFIIEMAALLHDVADEKLNESEEAGMKKVSDW 79 (223)
T ss_dssp HHHHHHHHHHHHHTTSSSCTTTHHHHHHHHHHHHHHHTTTC-----SCHHHHHHHHTTHHHHC--CCSSSTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCcCcHHHHHHHHHHHHHHHHHcC-----CCHHHHHHHHHHhhccccccCCcHHHHHHHHHHH
Confidence 58999999999999999999999999999999999998876 799999999999999998764433334 899999
Q ss_pred HhhCCCCHHHHHHHHHHHHHhcCCcccccccCCCCChhhhhhhhhhhhhhhhhhHHHHHHhhhcccCCccCCCCCCCCCc
Q 027623 82 LEDEGLEESKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQDADRLDAIGAIGIARCFTFGGSRNRVLHDPAIKPRSD 161 (221)
Q Consensus 82 L~~~g~~~~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~DAD~LD~lGa~gi~R~~~y~~~~~~~~~~~~~~~~~~ 161 (221)
|.+.|+|++.++.|+++|.+|+++.+.++ .|.+++++||+|||+||+||++||+|||.|+|.+|+++|+|++||+..
T Consensus 80 L~~~g~~~~~i~~V~~~I~~Hs~~~~~~~---~p~tlea~iV~dADrLDalGaiGiaR~f~~~g~~~~~l~~~~~~~~~~ 156 (223)
T 3djb_A 80 LEELHVEEEESKHVLHIIANMSYKGGHGG---KVESIEGKLVQDADRLDALGAIGIARTFAYGGAKGRLMYDPTIPPREV 156 (223)
T ss_dssp HHHTCCCHHHHHHHHHHTTCCC--------------HHHHHHHHHHHTTTSSHHHHHHHHHHHHHHTCCSCCTTSCCC--
T ss_pred HHHCCCCHHHHHHHHHHHHHhCCccCCCC---CCCCHHHHHHHhHHHHHHHHhhHHHHHHHHHHHhCCcccCCccccccc
Confidence 99999999999999999999999865421 478999999999999999999999999999999999999999999999
Q ss_pred ccHHHhhhhccccHHHHHHHHHhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 027623 162 VSKEQYMKKEEQTTVNHFHEKLLKLKDLMKTEAGQRRAEKRHKFMEEFLMEFYEEWDGK 220 (221)
Q Consensus 162 ~~~~~y~~~~~~~~i~hf~ekll~l~~~~~T~~~r~~a~~r~~~~~~f~~~~~~E~~~~ 220 (221)
++.++| +....++|+||||||++|++.|+|++||++|++|++||++|+++|.+||+|.
T Consensus 157 ~~~~~y-~~~~~~~i~Hf~eKLl~L~~~m~T~~gr~~A~~R~~~m~~fl~~~~~E~~~~ 214 (223)
T 3djb_A 157 MTKDEY-RKNNDPSLNHFYEKLLKLKDLMNTNAAKQEAEVRHRYMEQFIEQFMKEWNAQ 214 (223)
T ss_dssp -----------CCTTHHHHHHTGGGTTSCCSHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccHHHH-hccchhHHHHHHHHHHhHHHHccCHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999 5567899999999999999999999999999999999999999999999985
No 3
>2pjq_A Uncharacterized protein LP_2664; LPR71, NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactobacillus plantarum WCFS1} SCOP: a.211.1.1
Probab=100.00 E-value=4e-52 Score=343.80 Aligned_cols=211 Identities=36% Similarity=0.587 Sum_probs=189.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCCCCCCCchHH-HHHHH
Q 027623 2 ESRVRKAEKLVERSMKGNDASHDASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDYKYLRDPSEE-KIVEN 80 (221)
Q Consensus 2 ~~~i~~~~~~~~~~~~~~~~~H~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~~~~~~~~~~-~~a~~ 80 (221)
.++++++++|+++++.+.+++|++.|+.||+.+|..|+..++ .|++++.+||||||||+.++..+...+ ..+.+
T Consensus 9 ~~~i~~~~~~v~~~~~~~~~~H~~~H~~rV~~~a~~ia~~~~-----~d~~ll~lAAlLHDigk~k~~~~~~~ga~~a~~ 83 (231)
T 2pjq_A 9 ETQLTAIQTYALQKLAHDHSGHGRDHLQRVNRLARRLAKDEG-----ANLNLTLAAAWLHDVIDDKLMANPAKAHQDLIV 83 (231)
T ss_dssp HHHHHHHHHHHHTSSTTCCSSCSHHHHHHHHHHHHHHHHHHT-----CCHHHHHHHHHHHHHHC---------CHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHHHHHcC-----CCHHHHHHHHHHHcCCcccCCChHHHHHHHHHH
Confidence 467999999999999888899999999999999999999887 699999999999999997654432223 89999
Q ss_pred HHhhCCCCHHHHHHHHHHHHHhcCCcccccccCCCCChhhhhhhhhhhhhhhhhhHHHHHHhhhcccCCccCCCCCCCCC
Q 027623 81 FLEDEGLEESKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQDADRLDAIGAIGIARCFTFGGSRNRVLHDPAIKPRS 160 (221)
Q Consensus 81 ~L~~~g~~~~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~DAD~LD~lGa~gi~R~~~y~~~~~~~~~~~~~~~~~ 160 (221)
+|.+.|+|++.++.|+++|.+|+++.+.++ ..|.+++++||+|||+||+||++||+|||.|+|.+++++|+|+++|+.
T Consensus 84 ~L~~~g~~~~~~~~V~~~I~~Hs~~~~~~~--~~~~~~ea~Iv~dAD~LDalgaigiaR~~~y~g~~~~~~y~~~~~~~~ 161 (231)
T 2pjq_A 84 QLNAQNVTADDQTAIFAIIDHMSFSKSFNG--PQKLSLEGQVVQDADRLDAIGAIGIARALYYSGHVGEKIYDPAIAPRE 161 (231)
T ss_dssp HHHTTTCCHHHHHHHHHHHTSCCTGGGGGC--CCCCCSHHHHHHHHHHHTTSHHHHHHHHHHHHHHHTCCSCCTTSCCCS
T ss_pred HHHHCCCCHHHHHHHHHHHHHcCCccccCC--CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHhhhcCCcccCCCcCccc
Confidence 999999999999999999999998875432 257899999999999999999999999999999999999999999999
Q ss_pred cccHHHhhhhccccHHHHHHHHHhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 027623 161 DVSKEQYMKKEEQTTVNHFHEKLLKLKDLMKTEAGQRRAEKRHKFMEEFLMEFYEEWDGK 220 (221)
Q Consensus 161 ~~~~~~y~~~~~~~~i~hf~ekll~l~~~~~T~~~r~~a~~r~~~~~~f~~~~~~E~~~~ 220 (221)
.++.+.| +.++.++|+||++|||++++.|+|++||++|++|++||++|+++|.+||.|.
T Consensus 162 ~~~~~~y-~~~~~~~i~hf~ekll~l~~~~~T~~gr~~ae~r~~~m~~fl~~~~~E~~~~ 220 (231)
T 2pjq_A 162 HMTREQY-RHQPGTAINHFYEKLFKLAALMNTDTAKALAAHRTAVMHEFVDQFKAEWTAD 220 (231)
T ss_dssp SCCHHHH-HHSCCCTTHHHHHTGGGHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cccHHHH-hcCcchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 6678899999999999999999999999999999999999999999999875
No 4
>2qgs_A Protein Se1688; alpha-helical protein, structural genomics, PSI-2, protein S initiative, northeast structural genomics consortium; 2.00A {Staphylococcus epidermidis} SCOP: a.211.1.1
Probab=100.00 E-value=5.2e-52 Score=341.87 Aligned_cols=209 Identities=33% Similarity=0.527 Sum_probs=186.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHH-HHHhCCCCCCCcHHHHHHHHHhhhccCCCCCCCchHH-HHHH
Q 027623 2 ESRVRKAEKLVERSMKGNDASHDASHVWRVRDLALSL-AREEGLASNPDSMEIVELAALLHDIGDYKYLRDPSEE-KIVE 79 (221)
Q Consensus 2 ~~~i~~~~~~~~~~~~~~~~~H~~~H~~rV~~~a~~i-a~~~~~~~~~~d~~~l~lAalLHDIg~~~~~~~~~~~-~~a~ 79 (221)
+++++++++|+++++.+.+++|++.|+.||+.+|..| +..++ .|++++.+||||||||+.++. +...+ ..+.
T Consensus 4 ~~li~~~~~~v~~~~~~~~~~H~~~H~~rV~~~a~~i~a~~~~-----~d~~~l~lAAlLHDigk~~~~-~~~~ga~~a~ 77 (225)
T 2qgs_A 4 RMKIKKAYEYMKSFHQHDTTGHDIAHVERVYNNACYIAKRENI-----TDTLVIELSSLLHDTVDSKLT-DEILAYDQLK 77 (225)
T ss_dssp HHHHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHHTTC-----SCCHHHHHHHHHTTTTCCSSS-CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHHhhccC-----CCHHHHHHHHHHHcCCCCCCC-cHHHHHHHHH
Confidence 4699999999999999888999999999999999999 88776 688999999999999998766 33334 8999
Q ss_pred HHHhhCCCCHHHHHHHHHHHHHhcCCcccccccCCCCChhhhhhhhhhhhhhhhhhHHHHHHhhhcccCCccCCC-CCCC
Q 027623 80 NFLEDEGLEESKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQDADRLDAIGAIGIARCFTFGGSRNRVLHDP-AIKP 158 (221)
Q Consensus 80 ~~L~~~g~~~~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~DAD~LD~lGa~gi~R~~~y~~~~~~~~~~~-~~~~ 158 (221)
++|+++|+|++.++.|+.+|.+|+++.+..+ ..|.+++++||+|||+||+||++||+|||.|+|.+|+++|+| .+||
T Consensus 78 ~~L~~~g~~~~~i~~V~~~I~~Hs~~~~~~~--~~~~~~e~~Iv~dAD~LDalGaigiaR~~~y~g~~~~~~y~~~~~~~ 155 (225)
T 2qgs_A 78 QFLSTLDLSSEISQQVLYIIKHMSYRAGKNN--HVKLSIDGEIVRDADRLDAIGAIGIARTFQFSGHFGEPMWTETKLSN 155 (225)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHTTC---------CCCCCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHTCCSCCCCCCCH
T ss_pred HHHHHCCCCHHHHHHHHHHHHHcCcccCCCC--CCCCCHHHHHHHhhHHHHHhhhHHHHHHHHHHHhcCCcccCccccCc
Confidence 9999999999999999999999998765321 247899999999999999999999999999999999999998 7777
Q ss_pred CCcccHHHhhhhccccHHHHHHHHHhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 027623 159 RSDVSKEQYMKKEEQTTVNHFHEKLLKLKDLMKTEAGQRRAEKRHKFMEEFLMEFYEEWDGK 220 (221)
Q Consensus 159 ~~~~~~~~y~~~~~~~~i~hf~ekll~l~~~~~T~~~r~~a~~r~~~~~~f~~~~~~E~~~~ 220 (221)
..++.+.| +.++.++|+||++|||++++.|+|++||++|++|+++|++|+++|.+||+|.
T Consensus 156 -~~~~~~~y-~~~~~~~i~hf~ekll~l~~~~~T~~gr~~ae~r~~~m~~fl~~~~~E~~~~ 215 (225)
T 2qgs_A 156 -EELHTSLV-EELDNSAIKHFYEKLFKLKDLMHTPTAKKLAEERHQFMIQYLKQFMSEWNFN 215 (225)
T ss_dssp -HHHTSGGG-GGSCCCHHHHHHHTGGGSGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred -ccccHHHh-hcCcchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 67778889 6778999999999999999999999999999999999999999999999875
No 5
>3gw7_A Uncharacterized protein YEDJ; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Escherichia coli k-12}
Probab=100.00 E-value=2.8e-53 Score=351.19 Aligned_cols=202 Identities=29% Similarity=0.427 Sum_probs=166.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCCC-CC---CCchH-H-HH
Q 027623 4 RVRKAEKLVERSMKGNDASHDASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDYK-YL---RDPSE-E-KI 77 (221)
Q Consensus 4 ~i~~~~~~~~~~~~~~~~~H~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~~-~~---~~~~~-~-~~ 77 (221)
..+++.+||++++.+.+++|++.|+.||+.+|..|+..++ .|++++.+||||||||+.+ +. .+|+. + ..
T Consensus 6 ~~~~~~~~v~~~~~~~~~~H~~~H~~rV~~~a~~ia~~~~-----~d~~~~~~AalLHDig~~~~~~~~~~~H~~~ga~~ 80 (239)
T 3gw7_A 6 WQAQFENWLKNHHQHQDAAHDVCHFRRVWATAQKLAADDD-----VDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEE 80 (239)
T ss_dssp TTGGGTTTTTCC---------CCHHHHHHHHHHHHTTTSC-----SCTTHHHHHHHHTTTTC--------CCSSHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHcC-----CCHHHHHHHHHHhhcccccccCCccccHHHHHHHH
Confidence 4466788899999888999999999999999999998876 6899999999999999963 22 23443 3 88
Q ss_pred HHHHHhh--CCCCHHHHHHHHHHHHHhcCCcccccccCCCCChhhhhhhhhhhhhhhhhhHHHHHHhhhcccCCccCCCC
Q 027623 78 VENFLED--EGLEESKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQDADRLDAIGAIGIARCFTFGGSRNRVLHDPA 155 (221)
Q Consensus 78 a~~~L~~--~g~~~~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~DAD~LD~lGa~gi~R~~~y~~~~~~~~~~~~ 155 (221)
|+++|.+ .|+|++.++.|+++|.+|+++.+. .|.+++++||+|||+||+||++||+|||.|+|.+|+++|+|+
T Consensus 81 A~~~L~~~~~g~~~e~i~~V~~~I~~Hs~~~~~-----~p~t~Ea~IV~DADrLDalGAiGIaR~f~y~g~~~~~l~~p~ 155 (239)
T 3gw7_A 81 TRRLLREEFEQFPAEKIEAVCHAIAAHSFSAQI-----APLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGE 155 (239)
T ss_dssp HHHHHHHHTTSSCTTTTTSTTTGGGSSCTTSCC-----CCCSHHHHHHHHHTGGGGSHHHHHHHHHHHHHHTTCCCSGGG
T ss_pred HHHHHHhccCCcCHHHHHHHHHHHHHcCCCCCC-----CCCChHHHHHHhHHHHHHhhchhHHHHHHHHHHhCCccCCCc
Confidence 9999999 999999999999999999987542 688999999999999999999999999999999999999999
Q ss_pred CCCCCcccHHHhhhhccccHHHHHHHHHhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 027623 156 IKPRSDVSKEQYMKKEEQTTVNHFHEKLLKLKDLMKTEAGQRRAEKRHKFMEEFLMEFYEEWDGK 220 (221)
Q Consensus 156 ~~~~~~~~~~~y~~~~~~~~i~hf~ekll~l~~~~~T~~~r~~a~~r~~~~~~f~~~~~~E~~~~ 220 (221)
+|+....+. ....++|+||+||||+|++.|+|++||++|++|++||++|+++|.+||+|.
T Consensus 156 ~~~~~~r~~-----~~~~~~i~Hf~eKLl~L~~~m~T~~gr~~A~~R~~~m~~fl~~~~~E~~g~ 215 (239)
T 3gw7_A 156 DPFAQHRPL-----DDKRYALDHFQTKLLKLPQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGE 215 (239)
T ss_dssp GGGGTSCCC-----CC--CHHHHHTTTGGGTTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred chhhhhhcc-----ccchhHHHHHHHHHHhhHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 876432211 123579999999999999999999999999999999999999999999986
No 6
>3b57_A LIN1889 protein; Q92AN1, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 3.00A {Listeria innocua CLIP11262} SCOP: a.211.1.1
Probab=100.00 E-value=3.8e-49 Score=321.42 Aligned_cols=198 Identities=35% Similarity=0.545 Sum_probs=165.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCCCCCCCchHH-HHHHH
Q 027623 2 ESRVRKAEKLVERSMKGNDASHDASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDYKYLRDPSEE-KIVEN 80 (221)
Q Consensus 2 ~~~i~~~~~~~~~~~~~~~~~H~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~~~~~~~~~~-~~a~~ 80 (221)
+++|+++++|+++++.+++++|++.|+.||+.+|..|+..++ .|++++.+||||||||+.++..+++.+ ..+.+
T Consensus 4 ~~li~~~~~~v~~~~~~~~~~H~~~H~~rV~~~a~~ia~~~~-----~d~~~v~~AAlLHDig~~~~~~~~~~~a~~a~~ 78 (209)
T 3b57_A 4 EEIILSAKNWMHSHFENETTGHDWSHIKRVWKLSKEIQSKEG-----GDLFTIELAALFHDYSDIKLTTDEQEATKTLIN 78 (209)
T ss_dssp HHHHHHHHHHHHTTC------CCHHHHHHHHHHHHHHHHHHC-----SCHHHHHHHHHHTTCCC-------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHcC-----CCHHHHHHHHHHhccCcccCCCchHHHHHHHHH
Confidence 578999999999999888899999999999999999999887 699999999999999998865554445 89999
Q ss_pred HHhhCCCCHHHHHHHHHHHHHhcCCcccccccCCCCChhhhhhhhhhhhhhhhhhHHHHHHhhhcccCCccCCCCCCCCC
Q 027623 81 FLEDEGLEESKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQDADRLDAIGAIGIARCFTFGGSRNRVLHDPAIKPRS 160 (221)
Q Consensus 81 ~L~~~g~~~~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~DAD~LD~lGa~gi~R~~~y~~~~~~~~~~~~~~~~~ 160 (221)
+|++.|+|++.++.|+++|.+|+++.+.++ ..|.+++++||+|||+||+||++||+|||.|+|..++++|+
T Consensus 79 ~L~~~g~~~~~~~~V~~~I~~Hs~~~~~~~--~~~~~~ea~iv~dAD~LDalgaigiaR~~~y~g~~~~~~~~------- 149 (209)
T 3b57_A 79 WMETKEIPSELIKKIIRIIQSVSFKKGKNT--FKALTIEEKIVQDADRLDAIGAIGIARTFTYGGAHNREIAN------- 149 (209)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHC-----------CCCHHHHHHHHHHHHTTSHHHHHHHHHHHHTTTTCCSCC-------
T ss_pred HHHHCCCCHHHHHHHHHHHHHcCccccCCC--CCCCCHHHHHHcCHHHHhHHHhHHHHHHHHHHHhcCCcccc-------
Confidence 999999999999999999999998765321 36789999999999999999999999999999999999985
Q ss_pred cccHHHhhhhccccHHHHHHHHHhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 027623 161 DVSKEQYMKKEEQTTVNHFHEKLLKLKDLMKTEAGQRRAEKRHKFMEEFLMEFYEEWDGK 220 (221)
Q Consensus 161 ~~~~~~y~~~~~~~~i~hf~ekll~l~~~~~T~~~r~~a~~r~~~~~~f~~~~~~E~~~~ 220 (221)
| +..+.++|+||++||+++++.|+|++||++|++|+++|++|+++|.+||+|.
T Consensus 150 ------~-~~~~~~~i~hf~ekl~~l~~~~~T~~gr~~a~~r~~~m~~f~~~~~~e~~~~ 202 (209)
T 3b57_A 150 ------Q-NNPKNTTLQHFYDKLLLIKDQLNTETAKTIAKEKQKIMQDFIQALEKELKVL 202 (209)
T ss_dssp ------C-C-CCSCHHHHHHHTHHHHHHHCCCHHHHHTTHHHHHHHHHHHHHHHHHTTTC
T ss_pred ------c-cccchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhChh
Confidence 1 2345689999999999999999999999999999999999999999999985
No 7
>2pq7_A Predicted HD superfamily hydrolase; 104161995, HD domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.45A {Uncultured thermotogales bacterium} SCOP: a.211.1.1
Probab=100.00 E-value=3.1e-44 Score=294.49 Aligned_cols=201 Identities=31% Similarity=0.458 Sum_probs=145.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCCC---CCCCchH-H-H
Q 027623 2 ESRVRKAEKLVERSMKGNDASHDASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDYK---YLRDPSE-E-K 76 (221)
Q Consensus 2 ~~~i~~~~~~~~~~~~~~~~~H~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~~---~~~~~~~-~-~ 76 (221)
+.+++++++|+++++.+.+++|++.|+.||+.+|..|+..++ .|++++.+||||||||... ....|+. + .
T Consensus 12 ~~l~~~~~~~v~~~~~~~~~~h~~~H~~rV~~~a~~la~~~~-----~d~~~l~~AaLLHDIg~~~~~~~~~~H~~~ga~ 86 (220)
T 2pq7_A 12 PHLREILNIVREAFKDYDDPAHDISHTFRVMENASEIASREK-----CDLQKAIIAALLHDIKRPHEALTGVDHAESGAE 86 (220)
T ss_dssp TTHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHT-----CCHHHHHHHHHHTTTTHHHHHHHCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHcC-----CCHHHHHHHHHHHcCCCcccCCCcCCHHHHHHH
Confidence 568899999999999888899999999999999999999887 6899999999999997531 1234544 3 7
Q ss_pred HHHHHHhhCCCCHHHHHHHHHHHHHhcCCcccccccCCCCChhhhhhhhhhhhhhhhhhHHHHHHhhhcccCCccCCCCC
Q 027623 77 IVENFLEDEGLEESKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQDADRLDAIGAIGIARCFTFGGSRNRVLHDPAI 156 (221)
Q Consensus 77 ~a~~~L~~~g~~~~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~DAD~LD~lGa~gi~R~~~y~~~~~~~~~~~~~ 156 (221)
+++++|+++|+|++.++.|+.+|.+|+++.+. .|.+++++||+|||+||++|++|++|++.|++..++++|+|..
T Consensus 87 ~a~~~L~~~~~~~~~i~~v~~~I~~H~~~~~~-----~~~~~~a~Iv~dAD~Ldal~a~~i~r~~~~~~~~~~~~~dp~~ 161 (220)
T 2pq7_A 87 YASGLLPTMGFDISFVAEVSKAIRSHRYSGGL-----TPTSLTGKILQDADRLDAIGAVAIARVFSYSGKTGTPLHSLQF 161 (220)
T ss_dssp HHHHHGGGGTCCHHHHHHHHHHHHHCC----------CCCSHHHHHHHHHHHGGGSSHHHHHHHHHC-------------
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHcCcccCC-----CCCCHHHHHHHHhhHHhhccchHHHHHHHHHHhcCCcccCCcc
Confidence 88899999999999999999999999986431 5778999999999999999999999999999999999999873
Q ss_pred -CCCCcccHHHhhhhccccHHHHHHHHHhcc-hhhcCCHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 027623 157 -KPRSDVSKEQYMKKEEQTTVNHFHEKLLKL-KDLMKTEAGQRRAEKRHKFMEEFLMEFYEEWDG 219 (221)
Q Consensus 157 -~~~~~~~~~~y~~~~~~~~i~hf~ekll~l-~~~~~T~~~r~~a~~r~~~~~~f~~~~~~E~~~ 219 (221)
+. ..+ +.++.++|+||++||+++ ++.|+|++||++|++|++||++|+++|.+||+|
T Consensus 162 ~~~------~~~-~~~~~~~i~hf~ekl~~l~~~~~~T~~g~~~a~~r~~~m~~f~~~~~~E~~~ 219 (220)
T 2pq7_A 162 SPR------SSY-SGNSRSSINHFHEKILKIRPETFWTETARKMAEDRYSFVVEFVQRFLAEWGQ 219 (220)
T ss_dssp --------------------------------CTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred Cch------hhh-hcCcccHHHHHHHHHHHhchhhccCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 32 111 135578999999999999 999999999999999999999999999999987
No 8
>2cqz_A 177AA long hypothetical protein; hypothetical proteins, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.60A {Pyrococcus horikoshii}
Probab=99.66 E-value=1.2e-16 Score=126.24 Aligned_cols=134 Identities=21% Similarity=0.283 Sum_probs=94.7
Q ss_pred CCCCChHHHHHHHHHHHHHHHH---hCCCCCCCcHHHHHHHHHhhhcc-----CCCCCCCc-hHH-HHHHHHHhhCCCCH
Q 027623 20 DASHDASHVWRVRDLALSLARE---EGLASNPDSMEIVELAALLHDIG-----DYKYLRDP-SEE-KIVENFLEDEGLEE 89 (221)
Q Consensus 20 ~~~H~~~H~~rV~~~a~~ia~~---~~~~~~~~d~~~l~lAalLHDIg-----~~~~~~~~-~~~-~~a~~~L~~~g~~~ 89 (221)
.+.-..+|+.||+.+|..|+.. .+ .+.|++.+.++|||||++ +.++.... ... ..-...+... +
T Consensus 29 ~~esvaeHs~rVa~~A~~la~~~~~~~---~~~d~~~v~~~aLlHD~~E~~~GD~p~~~~~~~~~~~~E~~a~~~~-l-- 102 (177)
T 2cqz_A 29 EPESIADHSFGVAFITLVLADVLEKRG---KRIDVEKALKMAIVHDLAEAIITDIPLSAQEFVDKDKAEALVFKKV-F-- 102 (177)
T ss_dssp SCCBHHHHHHHHHHHHHHHHHHHHHTT---CCCCHHHHHHHHHHTTTTHHHHCCCCTTTTTTSCHHHHHHHHHHHT-C--
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHcC---CCCCHHHHHHHHHHhchHHHHcCCCccccccHHHHHHHHHHHHHHH-H--
Confidence 3456789999999999999976 22 137999999999999997 44322111 110 1111111121 2
Q ss_pred HHHHHHHHHHHHhcCCcccccccCCCCChhhhhhhhhhhhhhhhhhHHHHHHhhhcccCCccCCCCCCCCCcccHHHhhh
Q 027623 90 SKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQDADRLDAIGAIGIARCFTFGGSRNRVLHDPAIKPRSDVSKEQYMK 169 (221)
Q Consensus 90 ~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~DAD~LD~lGa~gi~R~~~y~~~~~~~~~~~~~~~~~~~~~~~y~~ 169 (221)
+.+..++. +|. .+.++++++|+|||+||++ .+|+.|+|..+.
T Consensus 103 ---~~i~~l~~--ef~--------~~~t~Ea~~vk~aDrL~a~-----l~a~~~~~~~~~-------------------- 144 (177)
T 2cqz_A 103 ---PEFYELYR--EYQ--------ECSSPEAQLVRIADKLDMI-----LQAYQYELSGNK-------------------- 144 (177)
T ss_dssp ---GGGHHHHH--HHH--------HTCSHHHHHHHHHHHHHHH-----HHHHHHHHTTCC--------------------
T ss_pred ---HHHHHHHH--Hhh--------cCCCHHHHHHHHHHHHHHH-----HHHHHhhhcCCc--------------------
Confidence 33444444 342 2568999999999999975 899999986542
Q ss_pred hccccHHHHHHHHHhcchhhcCCHHHHHHHHHH
Q 027623 170 KEEQTTVNHFHEKLLKLKDLMKTEAGQRRAEKR 202 (221)
Q Consensus 170 ~~~~~~i~hf~ekll~l~~~~~T~~~r~~a~~r 202 (221)
.++||++|++++++.|+|++||++|++-
T Consensus 145 -----~~~~f~~kl~~l~~~~~t~~~k~~a~~i 172 (177)
T 2cqz_A 145 -----NLDEFWEAIEEIKRLELSKYLEDILNSV 172 (177)
T ss_dssp -----CCGGGGGHHHHHHTSGGGGGGHHHHHHH
T ss_pred -----cHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 4678999999999999999999999874
No 9
>2hek_A Hypothetical protein; predominantly alpha helical protein with GDP binding site AN site being FAR from EACH other, structural genomics, PSI; HET: GDP; 2.00A {Aquifex aeolicus} SCOP: a.211.1.1
Probab=99.36 E-value=1.3e-12 Score=114.02 Aligned_cols=106 Identities=21% Similarity=0.304 Sum_probs=84.0
Q ss_pred CCChHHHHHHHHHHHHHHHHhCCCCCCCcH-HHHHHHHHhhhccCCCCC----------CCchHH--HHHH-----HHHh
Q 027623 22 SHDASHVWRVRDLALSLAREEGLASNPDSM-EIVELAALLHDIGDYKYL----------RDPSEE--KIVE-----NFLE 83 (221)
Q Consensus 22 ~H~~~H~~rV~~~a~~ia~~~~~~~~~~d~-~~l~lAalLHDIg~~~~~----------~~~~~~--~~a~-----~~L~ 83 (221)
.++|.|+.+|+..|..|+...+. +. +++.+||||||||+.++. .+|++. .+++ ++|.
T Consensus 49 ~~r~~Hsl~V~~~a~~ia~~~~~-----~~~~~~~~AaLLHDiG~~pfsh~~e~~~~~g~~He~~g~~i~~~~~i~~iL~ 123 (371)
T 2hek_A 49 HTRFEHSLGVYHITERICESLKV-----KEKELVKLAGLLHDLGHPPFSHTTEVLLPRERSHEDFTERVIKETEIYEILK 123 (371)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHTC-----TTHHHHHHHHHTTTTTCCSSSSCHHHHSTTSSSCCCHHHHHHHHSHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHcCC-----CHHHHHHHHHHHHhcCccccccchHHHhccCCCHHHHHHHHHhcchHHHHHH
Confidence 47899999999999999999984 33 899999999999998732 344432 4444 8888
Q ss_pred hCCCCHHHHHHHHHHHHHhcCCcccccccCCCCChhhhhhh---hhhhhhhhhhhHHHHHHhhhcc
Q 027623 84 DEGLEESKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQ---DADRLDAIGAIGIARCFTFGGS 146 (221)
Q Consensus 84 ~~g~~~~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~---DAD~LD~lGa~gi~R~~~y~~~ 146 (221)
+. ++++.++.|+.+|..+++. .+.+.+++||+ |||+||++ .|-..++|.
T Consensus 124 ~~-~~~~~i~~I~~~I~~~~~~--------~~~~~l~~IVs~~lDaDRlDYl-----~RDs~~~g~ 175 (371)
T 2hek_A 124 QD-YSHEDIERLVRITLGKPED--------EEEKLLSEIITGEFGSDRMDYL-----RRDAYFCGV 175 (371)
T ss_dssp TT-SCHHHHHHHHHHHHTCCSS--------HHHHHHHHHHHSTTCHHHHHHH-----HHHHHHHTC
T ss_pred Hh-CCHHHHHHHHHHHhcCCCC--------cccchHHHHhcCCCCccccchh-----ccchhhhcC
Confidence 88 9999999999999977641 35678999999 99999986 455555553
No 10
>3ccg_A HD superfamily hydrolase; NP_347894.1, HD domain, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.50A {Clostridium acetobutylicum atcc 824}
Probab=99.33 E-value=7.4e-12 Score=99.64 Aligned_cols=106 Identities=19% Similarity=0.156 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCCCCCC-------------C
Q 027623 5 VRKAEKLVERSMKGNDASHDASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDYKYLR-------------D 71 (221)
Q Consensus 5 i~~~~~~~~~~~~~~~~~H~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~~~~~-------------~ 71 (221)
++++.+++++++. .+.|.|+.+|+.+|..||...+ .|++.+.+||||||||+..... +
T Consensus 5 ~~~~~~~l~~~~~----~~~~~Hs~~Va~~A~~lA~~~g-----~d~~~~~~AgLLHDiGk~~~~~~il~~~~~~~~~l~ 75 (190)
T 3ccg_A 5 YDKITDYLMNNLG----EKRYKHSLGVMDTAVRLAGIYN-----EDTEKARIAGLVHDCAKKLPGEKIIEICTNEGYELG 75 (190)
T ss_dssp HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHT-----CCHHHHHHHHHHTTTTTTSCHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHC-----cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHcCCCCC
Confidence 4678888888875 4699999999999999999998 5788999999999999974310 1
Q ss_pred ch--------HHHHHHHHHhh-CCC-CHHHHHHHHHHHHHhcCCcccccccCCCCChhhhhhhhhhhhh
Q 027623 72 PS--------EEKIVENFLED-EGL-EESKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQDADRLD 130 (221)
Q Consensus 72 ~~--------~~~~a~~~L~~-~g~-~~~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~DAD~LD 130 (221)
.. +...+..+|++ .|+ |+ .|..+|..|+... ++.+++++||..||.++
T Consensus 76 ~~E~~~~~~~H~~~Ga~il~~~~~~~~~----~i~~aI~~Hh~g~-------~~~~~~~~Iv~vAD~i~ 133 (190)
T 3ccg_A 76 DEDIRNSYLLHGLAGRILAKKVIGIDDE----DVLNAIEFHTTGR-------PNMSLLEKIIYIADYIE 133 (190)
T ss_dssp HHHHTTTTC-CHHHHHHHHHHTTCCCCH----HHHHHHHTTTTCC-------SSCCHHHHHHHHHHHHS
T ss_pred HHHHhHHHcchHHHHHHHHHHhcCCCcH----HHHHHHHHhcCCC-------CCCCHHHHHHHHHHhCC
Confidence 11 11688899998 899 54 5778999997521 46788999999999965
No 11
>2o08_A BH1327 protein; putative HD superfamily hydrolase, structural genomics, JOIN for structural genomics, JCSG; HET: UNL PG4 DGI; 1.90A {Bacillus halodurans}
Probab=99.32 E-value=3.9e-12 Score=101.06 Aligned_cols=106 Identities=23% Similarity=0.294 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCCCCCC--------------
Q 027623 5 VRKAEKLVERSMKGNDASHDASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDYKYLR-------------- 70 (221)
Q Consensus 5 i~~~~~~~~~~~~~~~~~H~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~~~~~-------------- 70 (221)
++++.+++++.+ +.+.|.|+.+|+.+|..||...+ .|++.+.+||||||||+.....
T Consensus 4 ~~~~~~~l~~~l----~~~~~~Hs~~Va~~A~~lA~~~g-----~~~~~~~~agLLHDIGk~~~~~~il~~~~~~~~~l~ 74 (188)
T 2o08_A 4 RGKALQLVKPHL----TEHRYQHTIGVMETAIDLAKLYG-----ADQQKAELAAIFHDYAKFRDKNEMRTLIREKLSQQD 74 (188)
T ss_dssp HHHHHHHHGGGC----CHHHHHHHHHHHHHHHHHHHHHT-----CCHHHHHHHHHHTTTTTTSCHHHHHHHHHHHCSCCG
T ss_pred HHHHHHHHHHhC----CHHHHHHHHHHHHHHHHHHHHHC-----cCHHHHHHHHHHHHHcCCCCHHHHHHHHHhcCCCCC
Confidence 356667777765 35799999999999999999998 5788999999999999973110
Q ss_pred ----Cc--hHHHHHHHHHhh-CCC-CHHHHHHHHHHHHHhcCCcccccccCCCCChhhhhhhhhhhhh
Q 027623 71 ----DP--SEEKIVENFLED-EGL-EESKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQDADRLD 130 (221)
Q Consensus 71 ----~~--~~~~~a~~~L~~-~g~-~~~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~DAD~LD 130 (221)
.. .+...+..+|++ .|+ |+ .|+.+|..|+... ++.+++++||..||.++
T Consensus 75 ~~e~~~~~~H~~~G~~il~~~~~~~~~----~i~~aI~~Hh~g~-------~~~~~~~~Iv~vAD~i~ 131 (188)
T 2o08_A 75 ILFYGDELLHAPCGAYYVREEVGIEDE----DVLQAIRFHTTGR-------PNMSLLEKIIFLADYIE 131 (188)
T ss_dssp GGGSCGGGSHHHHHHHHHHHHHCCCCH----HHHHHHHTTTTCC-------TTCCHHHHHHHHHHHHS
T ss_pred HHHHHHHhhHHHHHHHHHHHccCCChH----HHHHHHHHhccCC-------CCCCHHHHhhhhhccCC
Confidence 00 012788889988 899 54 5778999987521 46788999999999965
No 12
>2ogi_A Hypothetical protein SAG1661; structural genomics, joint center for structural genomics, J protein structure initiative; HET: GDP MES; 1.85A {Streptococcus agalactiae serogroup V}
Probab=99.23 E-value=4.6e-11 Score=95.52 Aligned_cols=106 Identities=25% Similarity=0.223 Sum_probs=80.6
Q ss_pred HHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCCCCCC-------------Cc
Q 027623 6 RKAEKLVERSMKGNDASHDASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDYKYLR-------------DP 72 (221)
Q Consensus 6 ~~~~~~~~~~~~~~~~~H~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~~~~~-------------~~ 72 (221)
+.+.+++++.+ +.+.|.|+.+|+.+|..||+..+ .|++.+.+||||||||+..... +.
T Consensus 13 ~~~~~~l~~~l----~~~~~~Hs~~Va~~A~~lA~~~g-----~d~~~~~~AgLLHDIGK~~~~~~il~~~~~~~~~l~~ 83 (196)
T 2ogi_A 13 TELLSKVRHMM----SDKRFNHVLGVERAAIELAERYG-----YDKEKAGLAALLHDYAKELSDDEFLRLIDKYQPDPDL 83 (196)
T ss_dssp HHHHHHHHTTS----CHHHHHHHHHHHHHHHHHHHHHT-----CCHHHHHHHHHHTTTTTTCCHHHHHHHHHHHCCCTGG
T ss_pred HHHHHHHHHHC----CHHHHHHHHHHHHHHHHHHHHHC-----cCHHHHHHHHHHHHcCCcCCHHHHHHHHHhcCCCCCH
Confidence 55566666655 45799999999999999999998 5788999999999999973110 00
Q ss_pred -h------HHHHHHHHHhh-CCCCHHHHHHHHHHHHHhcCCcccccccCCCCChhhhhhhhhhhhh
Q 027623 73 -S------EEKIVENFLED-EGLEESKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQDADRLD 130 (221)
Q Consensus 73 -~------~~~~a~~~L~~-~g~~~~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~DAD~LD 130 (221)
+ +...+..+|++ .|++++ .|+.+|..|+... ++.+++++||..||.++
T Consensus 84 ~E~~~~~~H~~~G~~ll~~~~~~~~~---~i~~aI~~Hh~g~-------~~~~~~~~Iv~vAD~i~ 139 (196)
T 2ogi_A 84 KKWGNNIWHGLVGIYKIQEDLAIKDQ---DILAAIAKHTVGS-------AQMSTLDKIVYVADYIE 139 (196)
T ss_dssp GGSCHHHHHHHTHHHHHHHHSCCCCH---HHHHHHHTTTTCC-------SSCCHHHHHHHHHHHHC
T ss_pred HHHHHHhccHHHHHHHHHHccCCCcH---HHHHHHHHhcCCC-------CCCCHHHHhhhhheecC
Confidence 0 11678889988 899332 5778999997521 45788999999999965
No 13
>3tm8_A BD1817, uncharacterized protein; HD-GYP, phosphodiesterase, unknown function, hydrolase,signa protein; 1.28A {Bdellovibrio bacteriovorus} PDB: 3tmb_A 3tmc_A 3tmd_A
Probab=98.83 E-value=3.1e-08 Score=85.09 Aligned_cols=107 Identities=21% Similarity=0.299 Sum_probs=76.0
Q ss_pred CCChHHHHHHHHHHHHHHHHhCCCCCCCcHHH-HHHHHHhhhccCCCCCC---------CchHH-------HHHHH-HHh
Q 027623 22 SHDASHVWRVRDLALSLAREEGLASNPDSMEI-VELAALLHDIGDYKYLR---------DPSEE-------KIVEN-FLE 83 (221)
Q Consensus 22 ~H~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~-l~lAalLHDIg~~~~~~---------~~~~~-------~~a~~-~L~ 83 (221)
...+.|+.+|..+|..|++..++ +..+... +.+||||||||+..... +.++. ..+.+ +++
T Consensus 165 ~~~~~Hs~~Va~la~~la~~lgl--~~~~~~~~l~~aaLLHDIGk~~ip~~il~k~~~L~~~E~~~~~~H~~~G~~~ll~ 242 (328)
T 3tm8_A 165 KTISHHGVTVSTLSIALAQKLGI--TDPKKTQLLTLGALLHDYGHHHSPLNLNQPLDSMSPEDLALWKKHPIEGAQKVQD 242 (328)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTC--CCHHHHHHHHHHHHHTTGGGTTCSCCCSSCGGGSCHHHHHHHHHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHHHHHHHcCc--CHHHHHHHHHHHHHHhcCCcccCCHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46689999999999999999985 2234456 88999999999974321 11121 67888 777
Q ss_pred hCCCCHHHHHHHHHHHHHhcCC-cc--cccccCCCCChhhhhhhhhhhhhhhhh
Q 027623 84 DEGLEESKKMRILNIIKKMGFK-DE--IAGLANAEFSPEFGVVQDADRLDAIGA 134 (221)
Q Consensus 84 ~~g~~~~~~~~V~~~I~~h~~~-~~--~~~~~~~~~~~ea~il~DAD~LD~lGa 134 (221)
..++++ .|..+|..|.-. .+ +.+......++.++|+.-||..|++..
T Consensus 243 ~~~~~~----~v~~~i~~HHEr~dGsGP~gl~g~~I~~~arIv~vaD~~dal~~ 292 (328)
T 3tm8_A 243 KKHFDQ----TVINIIGQHEETINGTGPKGLREKDMDPLAVLVSSANAMDRLIT 292 (328)
T ss_dssp CTTSCH----HHHHHHHHTTCCTBSCSTTCCBGGGSCHHHHHHHHHHHHHHHHH
T ss_pred hCCCcH----HHHHHHHHhcCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHHhC
Confidence 888884 677889888521 11 111112356788999999999998744
No 14
>2dqb_A Deoxyguanosinetriphosphate triphosphohydrolase, P; dntpase, DNTP, single-stranded DNA, DNA dGTPase, HD superfamily, structural genomics; 2.20A {Thermus thermophilus}
Probab=98.75 E-value=5.1e-08 Score=84.98 Aligned_cols=101 Identities=21% Similarity=0.190 Sum_probs=69.7
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCCCCCCCch--------------HHHHHHHHHhh-----
Q 027623 24 DASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDYKYLRDPS--------------EEKIVENFLED----- 84 (221)
Q Consensus 24 ~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~~~~~~~~--------------~~~~a~~~L~~----- 84 (221)
.+.|++.|+.+|..|+...+ .+.+++.+|||+||||..++.-..+ +...+.+++..
T Consensus 76 Rl~HSl~Va~iar~ia~~l~-----l~~~l~~~a~LlHDiGh~PFgH~~E~~l~~~~~~~ggf~Hn~~s~ril~~le~~~ 150 (376)
T 2dqb_A 76 RLTHTLEVAQVSRSIARALG-----LNEDLTEAIALSHDLGHPPFGHTGEHVLNALMQDHGGFEHNAQALRILTHLEVRY 150 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-----CCHHHHHHHHHHTTTTCCSSTTHHHHHHHHHTTTTTCCCHHHHHHHHHHTTCBCB
T ss_pred HHHHHHHHHHHHHHHHHHcC-----CCHHHHHHHHHHHhcCCCccccchHHHHHHHhhccCCCcHHHHHHHHHHHHhhcc
Confidence 46999999999999999998 5789999999999999986432111 11455566554
Q ss_pred -----CCCCHHHHHHHHHHHHHhcCCcc--cccccCCCCChhhhhhhhhhhhhhhh
Q 027623 85 -----EGLEESKKMRILNIIKKMGFKDE--IAGLANAEFSPEFGVVQDADRLDAIG 133 (221)
Q Consensus 85 -----~g~~~~~~~~V~~~I~~h~~~~~--~~~~~~~~~~~ea~il~DAD~LD~lG 133 (221)
++++. .+...|..|.++.. .......+.+++++||.+||++|++.
T Consensus 151 ~~~~glnLt~----~~l~~I~kh~~~~~~~~~~~~~~~~~le~~Iv~~AD~IaY~~ 202 (376)
T 2dqb_A 151 PGFRGLNLTY----EVLEGIATHEAAYSPGFKPLYEGQGTLEAQVVDLSDAIAYAA 202 (376)
T ss_dssp TTBSBCCCCH----HHHHHHHHSCC-----------CCSCHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCH----HHHHHHHhCCCccchhhhhhcccCCChhhhHHHHHHHHHhcc
Confidence 33444 56677778876431 00000125688999999999999874
No 15
>3hc1_A Uncharacterized HDOD domain protein; HDOD domain protein with unknown function, STRU genomics, joint center for structural genomics; 1.90A {Geobacter sulfurreducens}
Probab=98.75 E-value=1.8e-08 Score=85.63 Aligned_cols=98 Identities=20% Similarity=0.142 Sum_probs=75.4
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCCCCC----------------CC-c---hH--------HH
Q 027623 25 ASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDYKYL----------------RD-P---SE--------EK 76 (221)
Q Consensus 25 ~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~~~~----------------~~-~---~~--------~~ 76 (221)
|.|+.+|..+|..||+..+. .+.+.+.+||+|||||+.... +. . .+ ..
T Consensus 120 ~~hs~~va~~a~~la~~~~~----~~~~~~~~agllHDIGkl~l~~~~p~~~~~il~~~~~~~~~l~~~E~~~~~~~H~~ 195 (305)
T 3hc1_A 120 WAHSLGVARIAKLIAERTGF----LNPVNVYVAGLLHDVGEVFINFFRGKEFSQVVTLVDEEKITFGQAEERLFGTSHCE 195 (305)
T ss_dssp HHHHHHHHHHHHHHHHHTTC----SCHHHHHHHHHTTTHHHHHHHHHSHHHHHHHHHHHHHHCCCHHHHHHHHHSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHcCC----CCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHCCCHHH
Confidence 89999999999999999884 479999999999999985311 00 0 11 16
Q ss_pred HHHHHHhhCCCCHHHHHHHHHHHHHhcCCcccccccCCCCChhhhhhhhhhhhhhhhh
Q 027623 77 IVENFLEDEGLEESKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQDADRLDAIGA 134 (221)
Q Consensus 77 ~a~~~L~~~g~~~~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~DAD~LD~lGa 134 (221)
.+..+|+.+++|+ .|+.+|.+|+.+... ..+.+.+++||.-||.+|++-.
T Consensus 196 iG~~ll~~w~lp~----~i~~~I~~HHe~~~~----~~~~~~~a~Iv~lAD~~~~~~~ 245 (305)
T 3hc1_A 196 VGFALAKRWSLNE----FICDTILYHHDIEAV----PYKQAAIVAMVAFADEYCTLRR 245 (305)
T ss_dssp HHHHHHHHTTCCH----HHHHHHHHTTCGGGC----SSSCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCH----HHHHHHHHhCChhhc----cccccHHHHHHHHHHHHHHHhC
Confidence 8899999999995 577888888753221 1345789999999999997643
No 16
>2q14_A Phosphohydrolase; BT4208, HD domain, structural genomics, JO center for structural genomics, JCSG; HET: MSE ADP; 2.20A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.56 E-value=4.9e-07 Score=79.64 Aligned_cols=97 Identities=22% Similarity=0.149 Sum_probs=64.2
Q ss_pred CChHHHHHHHHHHHHHHHHhCCC---CCCCcHHHHHHHHHhhhccCCCCC----------CCchHH--HHHHHHHhhCCC
Q 027623 23 HDASHVWRVRDLALSLAREEGLA---SNPDSMEIVELAALLHDIGDYKYL----------RDPSEE--KIVENFLEDEGL 87 (221)
Q Consensus 23 H~~~H~~rV~~~a~~ia~~~~~~---~~~~d~~~l~lAalLHDIg~~~~~----------~~~~~~--~~a~~~L~~~g~ 87 (221)
..+.|++.|+.+|..++...+.. .++.+.+++.+||||||||..++. -+|++. .++..+....+
T Consensus 55 tRf~HSLgV~~la~~l~~~l~~~~~~~~~~d~~~~~~AaLlHDiGh~PfsH~~E~~~~~~~~He~~s~~ii~~l~~~i~- 133 (410)
T 2q14_A 55 TRFQHSLGAFYLMSEAITQLTSKGNFIFDSEAEAVQAAILLHDIGHGPFSHVLEDTIVQGVSHEEISLMLMERMNKEMN- 133 (410)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTTTCCTTHHHHHTTTSTTCCHHHHHHHHHHHHHHHTT-
T ss_pred CeeehHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCCCccccccHHhhcCCCCHHHHHHHHHHHhhhhHH-
Confidence 45899999999999999876521 012367999999999999998642 234432 34444333322
Q ss_pred CHHHHHHHHHHHHHhcCCcccccccCCCCChhhhhhh---hhhhhhhhh
Q 027623 88 EESKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQ---DADRLDAIG 133 (221)
Q Consensus 88 ~~~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~---DAD~LD~lG 133 (221)
..+..++.+|. .+ .|.+.+.+||+ |||++|+|+
T Consensus 134 --~~L~~~~~ii~-g~----------~~~~~l~~ivs~~ldaDr~DYL~ 169 (410)
T 2q14_A 134 --GQLSLAIQIFK-DE----------YPKRFLHQLVSGQLDMDRLDYLR 169 (410)
T ss_dssp --TTTHHHHHHHT-TC----------SSSTHHHHHHSSTTCHHHHHHHH
T ss_pred --HHHHHHHHHHc-CC----------CccchHHHhhcCCcCcHHHHHhc
Confidence 12233344442 11 35678999999 999999964
No 17
>1xx7_A Oxetanocin-like protein; PSI, secsg, protein structure initiative, southeast collaboratory for structural genomics; 2.26A {Pyrococcus furiosus} SCOP: a.211.1.1
Probab=98.35 E-value=2.2e-06 Score=67.62 Aligned_cols=129 Identities=23% Similarity=0.313 Sum_probs=79.0
Q ss_pred CCCChHHHHHHHHHHHHHHHHh---CCCCCCCcHHHHHHHHHhhhccC-----CCCC----CCchHH--HHHHHHHhhCC
Q 027623 21 ASHDASHVWRVRDLALSLAREE---GLASNPDSMEIVELAALLHDIGD-----YKYL----RDPSEE--KIVENFLEDEG 86 (221)
Q Consensus 21 ~~H~~~H~~rV~~~a~~ia~~~---~~~~~~~d~~~l~lAalLHDIg~-----~~~~----~~~~~~--~~a~~~L~~~g 86 (221)
+.-..+|+.+|+.+|..++... + .+.|+.-+...||+||++- .++. ....+. ..+.++|
T Consensus 35 ~EsvAeHS~~vA~ia~~la~~~~~~~---~~~d~~r~~~~aL~HDl~E~~~GDip~~~~~~~~~~~~E~~a~~~ll---- 107 (184)
T 1xx7_A 35 PESVADHSYRVAFITLLLAEELKKKG---VEIDVEKALKIAIIHDLGEAIITDLPLSAQKYLNKEEAEAKALKDVL---- 107 (184)
T ss_dssp CCBHHHHHHHHHHHHHHHHHHHHHTT---CCCCHHHHHHHHHHTTTTHHHHCCCCHHHHTTSCHHHHHHHHHHHHC----
T ss_pred CCcHHHHHHHHHHHHHHHHHHHhhcc---CCCCHHHHHHHHHHcCcHHhhcCCCCCcccchHHHHHHHHHHHHHHH----
Confidence 4456799999999999998752 2 1379988999999999953 3210 000011 2223332
Q ss_pred CCHHHHHHHHHHHHHhcCCcccccccCCCCChhhhhhhhhhhhhhhhhhHHHHHHhhhcccCCccCCCCCCCCCcccHHH
Q 027623 87 LEESKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQDADRLDAIGAIGIARCFTFGGSRNRVLHDPAIKPRSDVSKEQ 166 (221)
Q Consensus 87 ~~~~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~DAD~LD~lGa~gi~R~~~y~~~~~~~~~~~~~~~~~~~~~~~ 166 (221)
++ +..+... |. ...+++++++.+||+|+++ ..++.|.+..+..
T Consensus 108 --~e----~~~l~~e--ye--------~~~t~Ea~~vK~aDkl~a~-----lqa~~~~~~g~~~---------------- 150 (184)
T 1xx7_A 108 --PE----YTELFEE--YS--------KALTLEGQLVKIADKLDMI-----IQAYEYELSGAKN---------------- 150 (184)
T ss_dssp --GG----GHHHHHH--HH--------HCCSHHHHHHHHHHHHHHH-----HHHHHHHHTTCCS----------------
T ss_pred --HH----HHHHHHH--Hh--------CCCCHHHHHHHHHHHHHHH-----HHHHHHHHccchh----------------
Confidence 11 1111111 11 2468999999999999974 6677666543332
Q ss_pred hhhhccccHHHHHHHHHhcchhhcCCHHHHHHHHHH
Q 027623 167 YMKKEEQTTVNHFHEKLLKLKDLMKTEAGQRRAEKR 202 (221)
Q Consensus 167 y~~~~~~~~i~hf~ekll~l~~~~~T~~~r~~a~~r 202 (221)
++.|+++..++.+.+.|+.+|+++++-
T Consensus 151 ---------~~~~~~~~~~l~~~~~t~~~~~l~~~i 177 (184)
T 1xx7_A 151 ---------LSEFWNALEDLEKLEISRYLREIIEEV 177 (184)
T ss_dssp ---------CGGGGGHHHHHTTSGGGGGCHHHHHHH
T ss_pred ---------HHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 112333333556778899999999864
No 18
>3m1t_A Putative phosphohydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE GOL; 1.62A {Shewanella amazonensis} SCOP: a.211.1.0
Probab=98.34 E-value=1.3e-06 Score=73.06 Aligned_cols=94 Identities=18% Similarity=0.188 Sum_probs=72.3
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCCCC---------------CC--Cch--H--------HH
Q 027623 24 DASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDYKY---------------LR--DPS--E--------EK 76 (221)
Q Consensus 24 ~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~~~---------------~~--~~~--~--------~~ 76 (221)
-|.|+.+|+..|..|++..+ .+++.+.+|+||||||+... .. ... + ..
T Consensus 106 ~~~hs~~~a~~a~~la~~~~-----~~~~~~~~agLLhdiGkl~l~~~~p~~~~~i~~~~~~~~~~~~~E~~~lg~~H~~ 180 (275)
T 3m1t_A 106 FWGNTFEVAIICQELAKRLG-----TLPEEAFTCGILHSIGELLIVNGDPAVAATISAAVADGADRNLMEKELLGYDNAE 180 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-----SCHHHHHHHHHHTTHHHHHHHHHCHHHHHHHHHHHHTTCCHHHHHHHHHSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhC-----CCHHHHHHHHHHHHccHHHHHHHCHHHHHHHHHHHhCCCCHHHHHHHHHCCCHHH
Confidence 47899999999999999987 57899999999999998531 01 100 1 16
Q ss_pred HHHHHHhhCCCCHHHHHHHHHHHHHhcCCcccccccCCCCChhhhhhhhhhhhhh
Q 027623 77 IVENFLEDEGLEESKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQDADRLDA 131 (221)
Q Consensus 77 ~a~~~L~~~g~~~~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~DAD~LD~ 131 (221)
.+..+++.+++|+ .|+.+|.+|+.+.. ..+...++.+|.-||.+..
T Consensus 181 vGa~ll~~W~lp~----~i~~aI~~Hh~~~~-----~~~~~~l~~iv~lAd~i~~ 226 (275)
T 3m1t_A 181 IGALLAQSWKFTP----HLVKGIQFQNHPKS-----AEPYSKLAGMLAMAKQIAA 226 (275)
T ss_dssp HHHHHHHHTTCCH----HHHHHHHTTTCGGG-----CSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCH----HHHHHHHHhCChhh-----cCCccHHHHHHHHHHHHHH
Confidence 8889999999996 57789999875422 1345678999999999764
No 19
>3i7a_A Putative metal-dependent phosphohydrolase; YP_926882.1, STRU genomics, joint center for structural genomics, JCSG; 2.06A {Shewanella amazonensis SB2B}
Probab=98.34 E-value=2.8e-06 Score=71.10 Aligned_cols=96 Identities=14% Similarity=0.103 Sum_probs=71.8
Q ss_pred ChHHHHHHHHHHHHHHHHh----CCCCCCCcHHHHHHHHHhhhccCCC----------CCCCch---H------HHHHHH
Q 027623 24 DASHVWRVRDLALSLAREE----GLASNPDSMEIVELAALLHDIGDYK----------YLRDPS---E------EKIVEN 80 (221)
Q Consensus 24 ~~~H~~rV~~~a~~ia~~~----~~~~~~~d~~~l~lAalLHDIg~~~----------~~~~~~---~------~~~a~~ 80 (221)
-|.|+.+|+..|..|++.. +. ...+++.+.+|+||||||+.. ...+.+ . ...+..
T Consensus 118 ~~~hs~~vA~~a~~la~~~~~~~~~--~~~~~~~~~laGLLHdiGkl~l~~~~~~~~~~l~~~~~~~~~~~~~H~~iGa~ 195 (281)
T 3i7a_A 118 VWRTSIDVTAAACSLLQIYNKKHPG--SGLNYDTLTLAGLVHNIGALPVLTEAEAHPEMFTTIEHLRSLVRKMQGPIGRA 195 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTT--CCCCHHHHHHHHHHTTTTHHHHHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccc--CCCCHHHHHHHHHHHHCCHHHHHHhHHhhHHHhcChHHHHHHHhCcHHHHHHH
Confidence 4899999999999999887 21 136899999999999999852 112211 1 178899
Q ss_pred HHhhCCCCHHHHHHHHHHHHHhcCCcccccccCCCCChhhhhhhhhhhhh
Q 027623 81 FLEDEGLEESKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQDADRLD 130 (221)
Q Consensus 81 ~L~~~g~~~~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~DAD~LD 130 (221)
+++.+|+|+ .|+.+|..|+.... ..+....++||+-||.+.
T Consensus 196 ll~~w~lp~----~i~~ai~~Hh~~~~-----~~~~~~~~~iV~lAd~~~ 236 (281)
T 3i7a_A 196 VLKSWDFAP----EVMEVVERWADLPY-----LGDHVSYLDFIRAAAFYT 236 (281)
T ss_dssp HHHHTTCCH----HHHHHHHHTTCTTC-----CCSSCCHHHHHHHHHHHH
T ss_pred HHHHCCCCH----HHHHHHHHHcChhh-----cCCcCCHHHHHHHHHHHc
Confidence 999999996 57788988864321 134567899999999854
No 20
>1vqr_A Hypothetical protein CJ0248; HD-domain/pdease-like fold, structural genomics, joint cente structural genomics, JCSG; 2.25A {Campylobacter jejuni subsp} SCOP: a.211.1.3
Probab=98.25 E-value=1.2e-06 Score=73.88 Aligned_cols=97 Identities=10% Similarity=0.044 Sum_probs=71.3
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCCCCC-------------C-----Cc---hH--------
Q 027623 24 DASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDYKYL-------------R-----DP---SE-------- 74 (221)
Q Consensus 24 ~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~~~~-------------~-----~~---~~-------- 74 (221)
-|.|+.+|+.+|..++...+ ..+.+.+.+||||||||+.... . .. .+
T Consensus 125 ~~~hs~~va~~a~~la~~~~----~~~~e~a~~aGLLHDIGkl~l~~~~p~~~~~~~il~~~~~~~~l~~~E~~~~g~~H 200 (297)
T 1vqr_A 125 FLKTCNEEATFIANWLNDED----KKLSHLLVPCAMLLRLGIVIFSNFLIQNHKDKDFLAFLNKNENLALAENEFLGVDH 200 (297)
T ss_dssp HHHHHHHHHHHHHHHHTTTC----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHCCHHHHHHHHTSSCH
T ss_pred HHHHHHHHHHHHHHHHHhcc----CCCHHHHHHHHHHHHccHHHHHHHChhhhhHHHHHHHHHcCCCHHHHHHHHHCCCH
Confidence 57899999999999997654 2578999999999999986310 0 00 01
Q ss_pred HHHHHHHHhhCCCCHHHHHHHHHHHHHhcCCcccccccCCCCChhhhhhhhhhhhhhh
Q 027623 75 EKIVENFLEDEGLEESKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQDADRLDAI 132 (221)
Q Consensus 75 ~~~a~~~L~~~g~~~~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~DAD~LD~l 132 (221)
...+..+|+.+++|+ .|+.+|..|..+... ......+++||.-||.++..
T Consensus 201 ~~iGa~ll~~w~lp~----~i~~aI~~Hh~~~~~----~~~~~~~a~iv~lAd~~~~~ 250 (297)
T 1vqr_A 201 ISFLGFLLHRWNFDD----VLIESICFVRTPHAA----REKVKKSAYALAITDHLFAP 250 (297)
T ss_dssp HHHHHHHHHHTTCCH----HHHHHHHTTTCGGGS----CTTTHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHCCCCH----HHHHHHHHhcChhhc----cccccHHHHHHHHHHHHHHH
Confidence 168889999999997 577899988643211 12345689999999998753
No 21
>3ljx_A MMOQ response regulator; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Methylococcus capsulatus} PDB: 3ljv_A 3p3q_A
Probab=98.14 E-value=3.9e-06 Score=70.60 Aligned_cols=98 Identities=11% Similarity=0.043 Sum_probs=71.9
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCCCC---CC----------Cc-----hH--------HHH
Q 027623 24 DASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDYKY---LR----------DP-----SE--------EKI 77 (221)
Q Consensus 24 ~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~~~---~~----------~~-----~~--------~~~ 77 (221)
-|.|+.+|+..|..|++..+. .+++.+.+|+||||||+... .. .. .+ ...
T Consensus 109 ~~~hs~~~A~~a~~la~~~~~----~~~~~~~~agLLhdiGkl~l~~~~p~~~~~il~~~~~~~l~~~E~~~lg~~H~~v 184 (288)
T 3ljx_A 109 YWQKSLARAVALQSITAQAST----VAPKEAFTLGLLADVGRLALATAWPEEYSECLRKADGEALIALERERFATDHDEL 184 (288)
T ss_dssp HHHHHHHHHHHHHHHHHTSSS----SCHHHHHHHHHHTTHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCC----CCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHccCHHHH
Confidence 378999999999999998874 47899999999999998531 00 00 01 168
Q ss_pred HHHHHhhCCCCHHHHHHHHHHHHHhcCCcccccccCCCCChhhhhhhhhhhhhhh
Q 027623 78 VENFLEDEGLEESKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQDADRLDAI 132 (221)
Q Consensus 78 a~~~L~~~g~~~~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~DAD~LD~l 132 (221)
+..+++.+++|+ .|+.+|..|..+... .......++++|.-||.+...
T Consensus 185 Ga~ll~~W~lp~----~i~~aI~~Hh~p~~~---~~~~~~~l~~iv~lAd~la~~ 232 (288)
T 3ljx_A 185 TRMLLTDWGFPQ----VFIDALQLSQQDEIR---DEGRTGRFARQLALAQHIADH 232 (288)
T ss_dssp HHHHHHHTTCCH----HHHHHHHHTTSSCCC---CCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCH----HHHHHHHHHcCcccc---cccchhHHHHHHHHHHHHHHH
Confidence 889999999997 577899998653210 001234678999999997654
No 22
>3u1n_A SAM domain and HD domain-containing protein 1; deoxynucleotide triphosphohydrolase, hydrolase; 3.10A {Homo sapiens}
Probab=98.13 E-value=8.8e-06 Score=73.31 Aligned_cols=118 Identities=24% Similarity=0.234 Sum_probs=72.9
Q ss_pred CChHHHHHHHHHHHHHHHHhCCC-----CCCCcHHHHHHHHHhhhccCCCCCC----------------CchHH--HHH-
Q 027623 23 HDASHVWRVRDLALSLAREEGLA-----SNPDSMEIVELAALLHDIGDYKYLR----------------DPSEE--KIV- 78 (221)
Q Consensus 23 H~~~H~~rV~~~a~~ia~~~~~~-----~~~~d~~~l~lAalLHDIg~~~~~~----------------~~~~~--~~a- 78 (221)
.+++|++.|+.+|+.++...+.. .+..+..++.+|||+||||..++.- +|+.. .+.
T Consensus 65 TRf~HSLgV~~la~~i~~~l~~~~~~~~~~~~d~~~v~~AaLlHDiGH~PFsH~~E~~~~~~~~~~~~~~HE~~S~~i~~ 144 (528)
T 3u1n_A 65 NRFEHSLGVGYLAGCLVHALGEKQPELQISERDVLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPEVKWTHEQGSVMMFE 144 (528)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHHCGGGCCCHHHHHHHHHHHHHTTTTCBTTBHHHHHTHHHHHCTTSCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhCcccCCCHHHHHHHHHHHHHhccCCCCccchhhhhhhhhhcCCCCCCHHHHHHHHHH
Confidence 35899999999999998753210 0123457899999999999986421 23332 222
Q ss_pred --------HHHHhhCCC-CHHHHHHHHHHHHHh--------cCCcccccccCCCCChhhhhhh------hhhhhhhhhhh
Q 027623 79 --------ENFLEDEGL-EESKKMRILNIIKKM--------GFKDEIAGLANAEFSPEFGVVQ------DADRLDAIGAI 135 (221)
Q Consensus 79 --------~~~L~~~g~-~~~~~~~V~~~I~~h--------~~~~~~~~~~~~~~~~ea~il~------DAD~LD~lGa~ 135 (221)
.++|.+.|+ +++.+..|...|..- .|... + ...+.+...+||+ |+|++|+|
T Consensus 145 ~li~~~~i~~iL~~~g~~~~~~i~~I~~lI~G~~~~~~~~~~~~~~--g-r~~ek~fL~~IVsn~~s~lDvDRmDYL--- 218 (528)
T 3u1n_A 145 HLINSNGIKPVMEQYGLIPEEDICFIKEQIVGPLESPVEDSLWPYK--G-RPENKSFLYEIVSNKRNGIDVDKWDYF--- 218 (528)
T ss_dssp HHHHHTTCHHHHHHTTCCHHHHHHHHHHHHHCCCC------CCCCS--S-SCGGGGGGGGSSCCTTTSCCHHHHHHH---
T ss_pred HHhccccHHHHHHHcCCCcHHHHHHHHHHhcCcccccccccccccc--C-CcchhhHHHHHHhCCCCCCCccchhhH---
Confidence 345667776 455666777766522 11110 0 0122355677775 89999996
Q ss_pred HHHHHHhhhcccC
Q 027623 136 GIARCFTFGGSRN 148 (221)
Q Consensus 136 gi~R~~~y~~~~~ 148 (221)
.|-..|.|..+
T Consensus 219 --lRDs~~tGv~~ 229 (528)
T 3u1n_A 219 --ARDCHHLGIQN 229 (528)
T ss_dssp --HHHHHHHTCCC
T ss_pred --HHHHHHhCCCC
Confidence 56666666543
No 23
>3rf0_A Exopolyphosphatase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, hydrolase; HET: MSE; 1.80A {Yersinia pestis}
Probab=98.13 E-value=5.5e-05 Score=60.66 Aligned_cols=82 Identities=13% Similarity=0.165 Sum_probs=60.6
Q ss_pred CCChHHHHHHHHHHHHHHHHhCC--CCCCCcH--HHHHHHHHhhhccCCCCCCCchHHHHHHHHHhh---CCCCHHHHHH
Q 027623 22 SHDASHVWRVRDLALSLAREEGL--ASNPDSM--EIVELAALLHDIGDYKYLRDPSEEKIVENFLED---EGLEESKKMR 94 (221)
Q Consensus 22 ~H~~~H~~rV~~~a~~ia~~~~~--~~~~~d~--~~l~lAalLHDIg~~~~~~~~~~~~~a~~~L~~---~g~~~~~~~~ 94 (221)
.-+..|..+|..+|..|...... ..++.+. .++..||+|||||....+..+. +-+..++.. .||+..+...
T Consensus 18 ~vd~~ha~~V~~~A~~Lf~~l~~~~~l~~~~~~~~lL~~Aa~LHdIG~~I~~~~~h--kHs~Yii~n~~l~Gfs~~e~~~ 95 (209)
T 3rf0_A 18 NIDREQARRVLETTEQLYTQWLAQNTKLVQPQLEALLKWAAMLHEVGLSINHSGMH--RHSAYILQNTNLPGFNQEQQTL 95 (209)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHTTGGGGTCSTTHH--HHHHHHHHHSCCTTCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcccccCcccch--HHHHHHHhCCCCCCCCHHHHHH
Confidence 45789999999999999875320 0123567 8999999999999976444433 333444433 4899999999
Q ss_pred HHHHHHHhcCC
Q 027623 95 ILNIIKKMGFK 105 (221)
Q Consensus 95 V~~~I~~h~~~ 105 (221)
|..++.+|+.+
T Consensus 96 lA~lv~~hr~~ 106 (209)
T 3rf0_A 96 LATLVRMHRKA 106 (209)
T ss_dssp HHHHHHTSSSC
T ss_pred HHHHHHHhcCC
Confidence 99999999754
No 24
>3irh_A HD domain protein; phosphohydrolase, dntpase, structural genomics, P protein structure initiative, midwest center for structural genomics; HET: DGT DTP; 2.40A {Enterococcus faecalis} PDB: 2o6i_A*
Probab=98.04 E-value=1.3e-05 Score=71.55 Aligned_cols=105 Identities=26% Similarity=0.305 Sum_probs=63.7
Q ss_pred ChHHHHHHHHHHHHHHHHhCC--C--------CCCCcHHHHHHHHHhhhccCCCCC--------CCchHH--HH------
Q 027623 24 DASHVWRVRDLALSLAREEGL--A--------SNPDSMEIVELAALLHDIGDYKYL--------RDPSEE--KI------ 77 (221)
Q Consensus 24 ~~~H~~rV~~~a~~ia~~~~~--~--------~~~~d~~~l~lAalLHDIg~~~~~--------~~~~~~--~~------ 77 (221)
+++|++.|+.+|+.++..... + -++.+..++.+|||+||||..++. .+|+.. .+
T Consensus 87 Rf~HSLgV~~la~~i~~~l~~~~~~~~~~~~~~~~~~~~~v~~AaLlHDIGH~PFsH~~E~~~~~~HE~~s~~ii~~~~~ 166 (480)
T 3irh_A 87 RFSHSLGVYEITRRICEIFQRNYSVERLGENGWNDDERLITLCAALLHDVGHGPYSHTFEHIFDTNHEAITVQIITSPET 166 (480)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSBHHHHGGGSBCGGGHHHHHHHHHHTTTTCCTTHHHHHHHHCCCHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCccccccccCCCHHHHHHHHHHHHHhccCCCCccchhhhccCCCHHHHHHHHHHccch
Confidence 489999999999999875420 0 012356789999999999998752 344432 11
Q ss_pred -HHHHHhhCCCCHHHHHHHHHHHHHhcCCcccccccCCCCChhhhhhh---hhhhhhhhhhhHHHHHHhhhcc
Q 027623 78 -VENFLEDEGLEESKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQ---DADRLDAIGAIGIARCFTFGGS 146 (221)
Q Consensus 78 -a~~~L~~~g~~~~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~---DAD~LD~lGa~gi~R~~~y~~~ 146 (221)
...+|.+.+.+- .+.|+.+|.. .+ |.....++++ |||++|.| .|-..++|.
T Consensus 167 ei~~iL~~~~~~~--p~~v~~ii~~-~~----------~~~~l~~lis~~LDvDRmDYL-----lRDsy~tGv 221 (480)
T 3irh_A 167 EVYQILNRVSADF--PEKVASVITK-QY----------PNPQVVQMISSQIDADRMDYL-----LRDAYFTGT 221 (480)
T ss_dssp HHHHHHHHHCTTH--HHHHHHHHTT-CS----------SCHHHHHHHSSTTCHHHHHHH-----HHHHHHHTC
T ss_pred hHHHHHHHcCCCc--HHHHHHHHcC-CC----------CchhHHHhccCCCCcHHHHHH-----HHHHHHhCC
Confidence 223444433331 2345555531 11 2233566665 99999985 566666654
No 25
>2paq_A 5'-deoxynucleotidase YFBR; HD domain phosphoh structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; 2.10A {Escherichia coli} SCOP: a.211.1.1 PDB: 2par_A* 2pau_A*
Probab=98.04 E-value=3.7e-05 Score=61.38 Aligned_cols=101 Identities=22% Similarity=0.206 Sum_probs=64.3
Q ss_pred CChHHHHHHHHHHHHHH----HHhCCCCCCCcHHHHHHHHHhhhccCCCCCC--------Cch------HH--HHHHHHH
Q 027623 23 HDASHVWRVRDLALSLA----REEGLASNPDSMEIVELAALLHDIGDYKYLR--------DPS------EE--KIVENFL 82 (221)
Q Consensus 23 H~~~H~~rV~~~a~~ia----~~~~~~~~~~d~~~l~lAalLHDIg~~~~~~--------~~~------~~--~~a~~~L 82 (221)
-..+|+.+|+.+|..++ ...+ .+.|+..+..+||+||+|...... +.. +. .....++
T Consensus 31 nVaeHS~~VA~lA~~la~~~~~~~~---~~vD~~~~~~~aLlHDi~E~~~GDi~~p~k~~~~~~~~~~~~~E~~~~~~i~ 107 (201)
T 2paq_A 31 NVSEHSLQVAMVAHALAAIKNRKFG---GNVNAERIALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQKLV 107 (201)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHHSC---CCCCHHHHHHHHHHTTTTHHHHCCCCCC---------CTHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHhhhHHhcC---cccCHHHHHHHHHhcccccccCCCCCchHhhhchHHHHHhcccHHHHHHHHH
Confidence 34689999999999999 4443 137999999999999998642111 011 11 2233333
Q ss_pred hhCCCCHHHHHHHHHHHHHhcCCcccccccCCCCChhhhhhhhhhhhhhhhhhHHHHHHhhh
Q 027623 83 EDEGLEESKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQDADRLDAIGAIGIARCFTFG 144 (221)
Q Consensus 83 ~~~g~~~~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~DAD~LD~lGa~gi~R~~~y~ 144 (221)
. ++|++..+.+.... .. .++.++++++|.+||+|+++ ..+..|.
T Consensus 108 ~--~Lp~~~~~e~~~l~----~e-------~e~~t~ea~lvk~aD~l~a~-----lqa~e~~ 151 (201)
T 2paq_A 108 D--MVPEELRDIFAPLI----DE-------HAYSDEEKSLVKQADALCAY-----LKCLEEL 151 (201)
T ss_dssp T--TSCGGGHHHHHHHH----TT-------TSCCHHHHHHHHHHHHHHHH-----HHHHHHH
T ss_pred H--hCCHHHHHHHHHHH----hc-------ccCCCHHHHHHHHHHHHHHH-----HHHHHHH
Confidence 2 46665444333322 11 14578999999999999975 4455554
No 26
>4dmb_A HD domain-containing protein 2; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium (NESG); HET: MSE GOL; 1.90A {Homo sapiens}
Probab=97.94 E-value=9.1e-05 Score=59.12 Aligned_cols=141 Identities=11% Similarity=0.173 Sum_probs=90.8
Q ss_pred CCCChHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccC-----CCCCC--CchH---H--HHHHHHHhhCCCC
Q 027623 21 ASHDASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGD-----YKYLR--DPSE---E--KIVENFLEDEGLE 88 (221)
Q Consensus 21 ~~H~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~-----~~~~~--~~~~---~--~~a~~~L~~~g~~ 88 (221)
+.-.-+|+.+|+-+|..++. . ..|+.-+...||+||++= ....+ +... . ..+.+++. .+|
T Consensus 43 ~ESVAEHS~~vAliA~~l~~-~-----~vD~~r~~~maL~HDl~E~~tGDitp~k~~~~~~k~~~E~~A~~~l~~--~LP 114 (204)
T 4dmb_A 43 PESVSDHMYRMAVMAMVIKD-D-----RLNKDRCVRLALVHDMAECIVGDIAPADNIPKEEKHRREEEAMKQITQ--LLP 114 (204)
T ss_dssp CCBHHHHHHHHHHHHHHSCC-T-----TSCHHHHHHHHHHTTTTHHHHCCCCGGGCCCHHHHHHHHHHHHHHHHT--TSC
T ss_pred CCcHHHHHHHHHHHHHHHcc-c-----cCCHHHHHHHHHhcchHHhhcCCCccccccchhhhHHHHHHHHHHHHH--hCC
Confidence 34456999999999998863 1 278888999999999764 21111 1111 1 33344442 578
Q ss_pred HHHHHHHHHHHHHhcCCcccccccCCCCChhhhhhhhhhhhhhhhhhHHHHHHhhhcccCCccCCCCCCCCCcccHHHhh
Q 027623 89 ESKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQDADRLDAIGAIGIARCFTFGGSRNRVLHDPAIKPRSDVSKEQYM 168 (221)
Q Consensus 89 ~~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~DAD~LD~lGa~gi~R~~~y~~~~~~~~~~~~~~~~~~~~~~~y~ 168 (221)
++....+..+... |. ...++++++|.++|+|+. +..|+.|....+.+
T Consensus 115 ~~~~~e~~~Lw~E--ye--------~~~t~Ea~~vK~aDkle~-----llqa~ey~~~Gn~~------------------ 161 (204)
T 4dmb_A 115 EDLRKELYELWEE--YE--------TQSSAEAKFVKQLDQCEM-----ILQASEYEDLEHKP------------------ 161 (204)
T ss_dssp HHHHHHHHHHHHH--HH--------HTCSHHHHHHHHHHHHHH-----HHHHHHHHHHHTCT------------------
T ss_pred HHHHHHHHHHHHH--HH--------cCCCHHHHHHHHHHHHHH-----HHHHHHHHHcCCCH------------------
Confidence 8777666666543 21 346899999999999996 56677775322221
Q ss_pred hhccccHHHHHHHHHhcchhhcCCHHHHHHHHHHHHHHHHHH
Q 027623 169 KKEEQTTVNHFHEKLLKLKDLMKTEAGQRRAEKRHKFMEEFL 210 (221)
Q Consensus 169 ~~~~~~~i~hf~ekll~l~~~~~T~~~r~~a~~r~~~~~~f~ 210 (221)
..++.|+.. ....++|+.++.++++-.+.=..|+
T Consensus 162 -----~~l~~ff~~---~~~~~~~~~~~~~~~~l~~~r~~~~ 195 (204)
T 4dmb_A 162 -----GRLQDFYDS---TAGKFNHPEIVQLVSELEAERSTNI 195 (204)
T ss_dssp -----TTTHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred -----hHHHHHHHH---HHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 134456554 2356899999988876554444444
No 27
>3mem_A Putative signal transduction protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.25A {Marinobacter aquaeolei}
Probab=97.90 E-value=3e-05 Score=69.32 Aligned_cols=97 Identities=16% Similarity=0.106 Sum_probs=71.2
Q ss_pred CChHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCCCCC----------------CC--c---hH-------
Q 027623 23 HDASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDYKYL----------------RD--P---SE------- 74 (221)
Q Consensus 23 H~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~~~~----------------~~--~---~~------- 74 (221)
.-|.|+.+|+..|..|++..+.. ...+.+.+.+|+||||||+.... .. . .+
T Consensus 278 ~~w~hs~~~A~~a~~LA~~~~~~-~~~~~~~aflaGLLhDIGkl~l~~~~p~~~~~i~~~~~~~~~~~~~~~E~~~lg~~ 356 (457)
T 3mem_A 278 DYWQQAIWQAQSAGILASMMPRG-QRPLFGLAYLAGLLHNFGHLVLAQVFPPHFKLVCRSLEVSPHIDSSVIEHYLLGIT 356 (457)
T ss_dssp CHHHHHHHHHHHHHHHHHHSCGG-GCCCHHHHHHHHHHTTTHHHHHHHHSHHHHHHHHHHHHHCTTSCHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHHHHHHhcccc-cCCCHHHHHHHHHHHHhhHHHHHHHCHHHHHHHHHHHHhcCCCCHHHHHHHHHcCC
Confidence 45899999999999999987630 01478999999999999985310 01 0 01
Q ss_pred -HHHHHHHHhhCCCCHHHHHHHHHHHHHhcCCcccccccCCCCChhhhhhhhhhhh
Q 027623 75 -EKIVENFLEDEGLEESKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQDADRL 129 (221)
Q Consensus 75 -~~~a~~~L~~~g~~~~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~DAD~L 129 (221)
...+..+++.+++|+ .|+.+|.+|+.+.. ..+...++.+|+-||.+
T Consensus 357 H~~vGa~Ll~~W~lP~----~i~~aI~~HH~p~~-----~~~~~~l~~iV~lAd~l 403 (457)
T 3mem_A 357 REQIAAQLMENWGMPD----EVTLAIRYQKNPAY-----DGPHNVYARLLWLGRQL 403 (457)
T ss_dssp HHHHHHHHHHHTTCCH----HHHHHHHHTTCTTC-----CSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCH----HHHHHHHHhcCccc-----cCcccHHHHHHHHHHHH
Confidence 167889999999997 57789999875432 12345788999999975
No 28
>3kh1_A Predicted metal-dependent phosphohydrolase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.37A {Magnetospirillum magnetotacticum ms-1}
Probab=97.78 E-value=0.00017 Score=57.34 Aligned_cols=101 Identities=21% Similarity=0.303 Sum_probs=68.7
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhcc-----CCCCCCCch-----HH--HHHHHHHhhCCCCHHHH
Q 027623 25 ASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIG-----DYKYLRDPS-----EE--KIVENFLEDEGLEESKK 92 (221)
Q Consensus 25 ~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg-----~~~~~~~~~-----~~--~~a~~~L~~~g~~~~~~ 92 (221)
-+|+.+|+-+|..++...+ .+.|+.-+...||+||++ +..++.... +. ..+.+++. .+|++..
T Consensus 42 AeHS~~vAliA~~la~~~~---~~vd~~r~~~maL~HDl~E~~tGDi~~~~~~~~~~~~~~E~~A~~~l~~--~LP~~~~ 116 (200)
T 3kh1_A 42 AEHSWHIATMAFLLAEYAD---EAVQIGRVARMLLIHDIVEIDAGDTFIHDEAGNEDKEERERKAAARLFG--LLPPDQA 116 (200)
T ss_dssp HHHHHHHHHHHHHTGGGSC---TTCCHHHHHHHHHHTTTTHHHHCCCCTTCCC---CHHHHHHHHHHHHHT--TSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHcc---CCCCHHHHHHHHHhcChHHHHhCCccccccccHHHHHHHHHHHHHHHHH--hCChHHH
Confidence 5899999999999987654 237898999999999975 433332111 11 33344443 3688777
Q ss_pred HHHHHHHHHhcCCcccccccCCCCChhhhhhhhhhhhhhhhhhHHHHHHhhhc
Q 027623 93 MRILNIIKKMGFKDEIAGLANAEFSPEFGVVQDADRLDAIGAIGIARCFTFGG 145 (221)
Q Consensus 93 ~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~DAD~LD~lGa~gi~R~~~y~~ 145 (221)
..+..+... |. ...+++++++.++|+|+++ ..+..|.|
T Consensus 117 ~e~~~Lw~E--yE--------~~~t~Ea~~vK~~Dkl~~~-----lqa~~~~g 154 (200)
T 3kh1_A 117 AEYSALWQE--YE--------ARETADARFADALDRLQPL-----LHNFETEG 154 (200)
T ss_dssp HHHHHHHHH--HH--------HTCSHHHHHHHHHHHHHHH-----HHHHHTTS
T ss_pred HHHHHHHHH--HH--------cCCCHHHHHHHHHHHHHHH-----HHHHHcCC
Confidence 777666542 21 2368999999999999964 55666765
No 29
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=97.61 E-value=0.00054 Score=62.06 Aligned_cols=82 Identities=15% Similarity=0.252 Sum_probs=59.1
Q ss_pred CCChHHHHHHHHHHHHHHHHh----CCCCCCCcHHHHHHHHHhhhccCCCCCCCchHHHHHHHHHhh---CCCCHHHHHH
Q 027623 22 SHDASHVWRVRDLALSLAREE----GLASNPDSMEIVELAALLHDIGDYKYLRDPSEEKIVENFLED---EGLEESKKMR 94 (221)
Q Consensus 22 ~H~~~H~~rV~~~a~~ia~~~----~~~~~~~d~~~l~lAalLHDIg~~~~~~~~~~~~~a~~~L~~---~g~~~~~~~~ 94 (221)
.-+..|..+|.++|..|.... ++.....+..++..||+|||||....+..|. +-+..++.. .||+..+...
T Consensus 327 ~~d~~ha~~V~~~a~~Lf~~l~~~~~l~~~~~~~~lL~~Aa~LhdiG~~I~~~~~~--~Hs~yii~n~~l~G~s~~e~~~ 404 (513)
T 1u6z_A 327 HIDSEQARRVLDTTMQMYEQWREQQPKLAHPQLEALLRWAAMLHEVGLNINHSGLH--RHSAYILQNSDLPGFNQEQQLM 404 (513)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHTTTTTTTCSTTHH--HHHHHHHHHSCCTTCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhCcCCChhHHHHHHHHHHHHHccCcCCccccc--hhHHHHHhcCCCCCCCHHHHHH
Confidence 347899999999999999752 1000012248999999999999976544443 334444433 5899999999
Q ss_pred HHHHHHHhcCC
Q 027623 95 ILNIIKKMGFK 105 (221)
Q Consensus 95 V~~~I~~h~~~ 105 (221)
|..++.+|+.+
T Consensus 405 lA~l~~~h~~~ 415 (513)
T 1u6z_A 405 MATLVRYHRKA 415 (513)
T ss_dssp HHHHHHTSSSC
T ss_pred HHHHHHHhCCC
Confidence 99999998754
No 30
>1ynb_A Hypothetical protein AF1432; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.76A {Archaeoglobus fulgidus} SCOP: a.211.1.1 PDB: 1yoy_A
Probab=97.41 E-value=0.00079 Score=52.30 Aligned_cols=37 Identities=35% Similarity=0.433 Sum_probs=31.9
Q ss_pred CChHHHHHHHHHHHHHHHHhCCCCCCCcH---HHHHHHHHhhhcc
Q 027623 23 HDASHVWRVRDLALSLAREEGLASNPDSM---EIVELAALLHDIG 64 (221)
Q Consensus 23 H~~~H~~rV~~~a~~ia~~~~~~~~~~d~---~~l~lAalLHDIg 64 (221)
-.-+|+.+|+-+|..++...+ .|+ .-+...||+||++
T Consensus 38 sVAeHS~~vA~iA~~la~~~~-----vd~~~~~r~~~maL~HDl~ 77 (173)
T 1ynb_A 38 SVAEHNFRAAIIAFILALKSG-----ESVEKACKAATAALFHDLH 77 (173)
T ss_dssp BHHHHHHHHHHHHHHHHHHTT-----CCHHHHHHHHHHHHHTTTT
T ss_pred cHHHHHHHHHHHHHHHhhhcC-----CChhHHHHHHHHHHHcchH
Confidence 446899999999999998655 788 8899999999995
No 31
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=97.41 E-value=0.00091 Score=60.49 Aligned_cols=92 Identities=14% Similarity=0.063 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCCCCCCCchHHHHHHHHHh
Q 027623 4 RVRKAEKLVERSMKGNDASHDASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDYKYLRDPSEEKIVENFLE 83 (221)
Q Consensus 4 ~i~~~~~~~~~~~~~~~~~H~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~~~~~~~~~~~~a~~~L~ 83 (221)
++..+..+.+.+ .-+..|..+|.++|..+.........+.+..++..||+|||||.......|. +-+..++.
T Consensus 318 ~~~s~~~l~~ry------~~d~~ha~~V~~~a~~Lf~ql~~~~~~~~~~lL~~Aa~LhdiG~~i~~~~~~--~Hs~yii~ 389 (508)
T 3hi0_A 318 LLVAADELAILR------ARSPEHARELADWSGRTFPVFGIDETEEESRYRQAACLLADISWRAHPDYRG--LQALNIIA 389 (508)
T ss_dssp HHHHHHHHHHHH------CSCHHHHHHHHHHHHHHGGGGTCCCCHHHHHHHHHHHHHTTTTTTSCGGGHH--HHHHHHHH
T ss_pred HHHHHHHHHHHh------CcCHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHhHHhCCCchH--HHHHHHHH
Confidence 344444444444 3478999999999999987653211234678999999999999875333322 33333333
Q ss_pred h---CCCCHHHHHHHHHHHHHhcC
Q 027623 84 D---EGLEESKKMRILNIIKKMGF 104 (221)
Q Consensus 84 ~---~g~~~~~~~~V~~~I~~h~~ 104 (221)
. .||+..+...|..++ .|++
T Consensus 390 n~~l~Gfs~~e~~~lA~~~-~~r~ 412 (508)
T 3hi0_A 390 HSSFVAITHPGRAYIALAN-YYRF 412 (508)
T ss_dssp HBCCCSCCHHHHHHHHHHH-HHHH
T ss_pred cCCCCCCCHHHHHHHHHHH-HHhc
Confidence 3 489999998888544 5544
No 32
>3mzo_A LIN2634 protein; HD-domain phosphohydrolase, structural genomics, joint cente structural genomics, JCSG, protein structure initiative; HET: MSE; 1.98A {Listeria innocua}
Probab=97.30 E-value=0.0059 Score=49.04 Aligned_cols=103 Identities=17% Similarity=0.193 Sum_probs=64.4
Q ss_pred CChHHHHHHHHHHHHHHHH---hCCCCCCCcHHHHHHHHHhhhccCCCCC--------CCch--H----H--HHHHHHHh
Q 027623 23 HDASHVWRVRDLALSLARE---EGLASNPDSMEIVELAALLHDIGDYKYL--------RDPS--E----E--KIVENFLE 83 (221)
Q Consensus 23 H~~~H~~rV~~~a~~ia~~---~~~~~~~~d~~~l~lAalLHDIg~~~~~--------~~~~--~----~--~~a~~~L~ 83 (221)
-.-+|+.+|+-+|..++.. .+ ...|+.-+...||+||++-.... .... . . ..+.+++.
T Consensus 30 svAeHS~~vA~iA~~La~~~~~~~---~~vD~~r~~~maL~HDl~E~~~GDi~tPvk~~~~~~~~~~~~~E~~a~~~li~ 106 (216)
T 3mzo_A 30 SVAEHSYKVTSIAQFFGAVEEDAG---NEVNWRALYEKALNHDYSELFIGDIKTPVKYATTELREMLSEVEESMTKNFIS 106 (216)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHTT---CCCCHHHHHHHHHHTTGGGGTSCCCCSCSSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcc---CCCCHHHHHHHHHHccHHHHHcCCCCchhcccchhhHHHHHHHHHHHHHHHHH
Confidence 3458999999999999953 23 24799999999999998754211 1111 1 0 22233321
Q ss_pred hCCCCHHHHHHHHHHHHHhcCCcccccccCCCCChhhhhhhhhhhhhhhhhhHHHHHHhhhc
Q 027623 84 DEGLEESKKMRILNIIKKMGFKDEIAGLANAEFSPEFGVVQDADRLDAIGAIGIARCFTFGG 145 (221)
Q Consensus 84 ~~g~~~~~~~~V~~~I~~h~~~~~~~~~~~~~~~~ea~il~DAD~LD~lGa~gi~R~~~y~~ 145 (221)
..+|++..+.....+.. ....+++++++.+||+|+++ ..+..|..
T Consensus 107 -~~LP~~~~~~~~~~~~e-----------~~~~t~ea~~vK~aDkl~~~-----lqa~~~~~ 151 (216)
T 3mzo_A 107 -REIPATFQPIYRHLLKE-----------GKDSTLEGKILAISDKVDLL-----YESFGEIQ 151 (216)
T ss_dssp -HHSCGGGHHHHHHHHSC-----------CCSSSHHHHHHHHHHHHHHH-----HHHHHHHH
T ss_pred -ccCCHHHHHHHHHHHhc-----------ccCCCHHHHHHHHHHHHHHH-----HHHHHHHH
Confidence 13566554444443221 12468999999999999974 55666554
No 33
>1f0j_A PDE4B, phosphodiesterase 4B; PDE phosphodiesterase, hydrolase; 1.77A {Homo sapiens} SCOP: a.211.1.2 PDB: 1ro6_A* 1ro9_A* 1ror_A* 3hmv_A* 1tb5_A* 1xm6_A* 1xlx_A* 1xm4_A* 1xlz_A* 1xmu_A* 1xmy_A* 1xn0_A* 1xos_A* 1xot_B* 1y2h_A* 1y2j_A* 3kkt_A* 3g4i_A* 3g4k_A* 3g4l_A* ...
Probab=97.09 E-value=0.0017 Score=56.47 Aligned_cols=61 Identities=16% Similarity=0.050 Sum_probs=44.0
Q ss_pred HHHHHHHHHhcCC---CCCCChHHHHHHHHHHHHHHHHhCCC--CCCCcHHHHHHHHHhhhccCCC
Q 027623 7 KAEKLVERSMKGN---DASHDASHVWRVRDLALSLAREEGLA--SNPDSMEIVELAALLHDIGDYK 67 (221)
Q Consensus 7 ~~~~~~~~~~~~~---~~~H~~~H~~rV~~~a~~ia~~~~~~--~~~~d~~~l~lAalLHDIg~~~ 67 (221)
.+..|+...-.++ .|-|++.|+..|++.+..+....++. .++.+...+.+||+.||+|..-
T Consensus 64 ~L~~Fl~~v~~~Y~~~npYHN~~HA~dV~q~~~~ll~~~~l~~~l~~le~~alliAAl~HDvdHpG 129 (377)
T 1f0j_A 64 TFITYMMTLEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPG 129 (377)
T ss_dssp HHHHHHHHHHHTSCTTSSSSSHHHHHHHHHHHHHHHTCGGGTTTSCHHHHHHHHHHHHHTTTTCCS
T ss_pred HHHHHHHHHHHccCCCCCccCHHHHHHHHHHHHHHHhcchhhhhCCHHHHHHHHHHHHHcCCCCCC
Confidence 3455555443333 47899999999999998888654321 2345678889999999999863
No 34
>1y2k_A DPDE3, PDE43, CAMP-specific 3',5'-cyclic phosphodiesterase 4D; PDE4D, pyrazole, hydrolase; HET: 7DE; 1.36A {Homo sapiens} SCOP: a.211.1.2 PDB: 1xon_A* 1xoq_A* 1xom_A* 1xor_A* 1y2c_A* 1y2d_A* 1y2e_A* 1y2b_A* 3iak_A* 3k4s_A* 1tbb_A* 1tb7_A* 3sl5_A* 3sl4_A* 2fm5_A* 3sl3_A* 2fm0_A* 3sl6_A* 3sl8_A* 1oyn_A* ...
Probab=97.04 E-value=0.0021 Score=55.36 Aligned_cols=61 Identities=15% Similarity=0.038 Sum_probs=43.9
Q ss_pred HHHHHHHHHhcCC---CCCCChHHHHHHHHHHHHHHHHhCCC--CCCCcHHHHHHHHHhhhccCCC
Q 027623 7 KAEKLVERSMKGN---DASHDASHVWRVRDLALSLAREEGLA--SNPDSMEIVELAALLHDIGDYK 67 (221)
Q Consensus 7 ~~~~~~~~~~~~~---~~~H~~~H~~rV~~~a~~ia~~~~~~--~~~~d~~~l~lAalLHDIg~~~ 67 (221)
.+..|+...-.++ .|-|++.|+..|++.+..+....++. .++.+...+.+||+.||+|..-
T Consensus 77 ~L~~fl~~v~~~Y~~~npYHN~~HA~dV~q~~~~ll~~~~l~~~l~~le~~alliAAl~HDv~HpG 142 (349)
T 1y2k_A 77 TLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPG 142 (349)
T ss_dssp HHHHHHHHHHHTSCTTCSSSSHHHHHHHHHHHHHHHTCGGGTTTSCHHHHHHHHHHHHHTTTTCCS
T ss_pred HHHHHHHHHHHccCCCCCccCHHHHHHHHHHHHHHHhhhhHHhhcCHHHHHHHHHHHHhccCCCCC
Confidence 3455555443333 47899999999999998887654321 2345678889999999999864
No 35
>2our_A CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphodiesterase 10A; PDE10, substrate specificity, hydrolase; HET: CMP; 1.45A {Homo sapiens} PDB: 2ous_A 2ouu_A* 3sn7_A* 3sni_A* 3snl_A* 4dff_A* 2wey_A* 2oun_A* 2oup_A 2ouq_A* 2ouv_A 2ouy_A* 4ael_A* 2y0j_A* 4ddl_A* 3uuo_A* 3ui7_A* 2o8h_A* 2ovv_A* 2ovy_A* ...
Probab=97.04 E-value=0.0032 Score=53.79 Aligned_cols=96 Identities=17% Similarity=0.122 Sum_probs=61.1
Q ss_pred HHHHHHHHHhcC--CCCCCChHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCCCCC---------------
Q 027623 7 KAEKLVERSMKG--NDASHDASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDYKYL--------------- 69 (221)
Q Consensus 7 ~~~~~~~~~~~~--~~~~H~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~~~~--------------- 69 (221)
++..|+...-.+ ..|-|++.|+..|++.+..+........++.+...+.+||+.||+|..-..
T Consensus 62 ~L~~fl~~v~~~Y~~npYHN~~HA~dV~q~~~~ll~~~~~~l~~le~~alliAAl~HDv~HpG~~N~fli~~~~~LA~lY 141 (331)
T 2our_A 62 KLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHDLDHRGFSNSYLQKFDHPLAALY 141 (331)
T ss_dssp HHHHHHHHHHHTSCSCSSSSHHHHHHHHHHHHHHHHTTGGGSCHHHHHHHHHHHHHTTTTCCSCCHHHHHHTTCHHHHHS
T ss_pred HHHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHccCCCCCCCCcHHHhcCCHHHHhc
Confidence 444555443332 357899999999999999888654111234677889999999999986321
Q ss_pred CCch-HH---HHHHHHHhhCCC------CHH----HHHHHHHHHHHh
Q 027623 70 RDPS-EE---KIVENFLEDEGL------EES----KKMRILNIIKKM 102 (221)
Q Consensus 70 ~~~~-~~---~~a~~~L~~~g~------~~~----~~~~V~~~I~~h 102 (221)
++.. |. ..+..+|.+.++ +.+ .+..|..+|..+
T Consensus 142 ndSvLE~hH~a~a~~iL~~~~~nif~~l~~~~~~~~r~~ii~~ILAT 188 (331)
T 2our_A 142 STSTMEQHHFSQTVSILQLEGHNIFSTLSSSEYEQVLEIIRKAIIAT 188 (331)
T ss_dssp CSSHHHHHHHHHHHHHHTSTTCCTTTTSCHHHHHHHHHHHHHHHHHT
T ss_pred CCchhHHHHHHHHHHHHhccccchhccCCHHHHHHHHHHHHHHHHHc
Confidence 1111 11 677888876554 344 345566666543
No 36
>1tbf_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5A, hydrolase; HET: VIA; 1.30A {Homo sapiens} SCOP: a.211.1.2 PDB: 1t9s_A* 1xoz_A* 1xp0_A* 2chm_A* 3tge_A* 3tgg_A* 3hc8_A* 3hdz_A* 1t9r_A* 3sie_A* 3shy_A* 3shz_A* 3b2r_A* 2h44_A* 2h42_A* 2h40_A* 1rkp_A* 1udt_A* 1udu_A* 1uho_A* ...
Probab=97.00 E-value=0.0065 Score=52.22 Aligned_cols=61 Identities=16% Similarity=0.147 Sum_probs=44.6
Q ss_pred HHHHHHHHHhcC---CCCCCChHHHHHHHHHHHHHHHHhCCC--CCCCcHHHHHHHHHhhhccCCC
Q 027623 7 KAEKLVERSMKG---NDASHDASHVWRVRDLALSLAREEGLA--SNPDSMEIVELAALLHDIGDYK 67 (221)
Q Consensus 7 ~~~~~~~~~~~~---~~~~H~~~H~~rV~~~a~~ia~~~~~~--~~~~d~~~l~lAalLHDIg~~~ 67 (221)
.+..|+...-.+ ..|-|++.|+..|++.+..+....++. .++.+...+.+||+.||+|..-
T Consensus 82 ~L~~fl~~v~~~Y~~~npYHN~~HA~dV~q~~~~ll~~~~l~~~l~~le~~alliAAl~HDv~HpG 147 (347)
T 1tbf_A 82 VLCRWILSVKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHPG 147 (347)
T ss_dssp HHHHHHHHHHHTSCTTSSSSSHHHHHHHHHHHHHHHHTTCCGGGSCHHHHHHHHHHHHHTTTTCCS
T ss_pred HHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHHHHcccccccCCHHHHHHHHHHHHHccCCCCC
Confidence 344555443322 357799999999999999998765432 2445778899999999999864
No 37
>2r8q_A Class I phosphodiesterase PDEB1; leishimaniasis, parasite inhibitor selectivity, CAMP phosphodiesterase, hydrolase; HET: IBM; 1.50A {Leishmania major}
Probab=96.98 E-value=0.0052 Score=53.09 Aligned_cols=61 Identities=13% Similarity=0.096 Sum_probs=44.1
Q ss_pred HHHHHHHHHhcC--CCCCCChHHHHHHHHHHHHHHHHhCCC--CCCCcHHHHHHHHHhhhccCCC
Q 027623 7 KAEKLVERSMKG--NDASHDASHVWRVRDLALSLAREEGLA--SNPDSMEIVELAALLHDIGDYK 67 (221)
Q Consensus 7 ~~~~~~~~~~~~--~~~~H~~~H~~rV~~~a~~ia~~~~~~--~~~~d~~~l~lAalLHDIg~~~ 67 (221)
.+..|+...-.+ ..|-|++.|+..|++.+..+....++. .++.+...+.+||+.||+|..-
T Consensus 82 ~L~~Fl~~v~~~Y~~npYHN~~HA~dV~q~~~~ll~~~~l~~~l~~le~~alliAAl~HDv~HpG 146 (359)
T 2r8q_A 82 TLLNFILQCRRRYRRVPYHNFYHVVDVCQTLHTYLYTGKASELLTELECYVLLVTALVHDLDHMG 146 (359)
T ss_dssp HHHHHHHHHHHTCCSCSSSSHHHHHHHHHHHHHHHHTSCGGGGSCHHHHHHHHHHHHHTTTTCCS
T ss_pred HHHHHHHHHHHhCCCCccccHHHHHHHHHHHHHHHHcccchhcccHHHHHHHHHHHHHhcCCCCC
Confidence 344555443332 357899999999999999888654321 2345778899999999999864
No 38
>1taz_A Calcium/calmodulin-dependent 3',5'-cyclic nucleot phosphodiesterase 1B; PDE1B, hydrolase; HET: CME; 1.77A {Homo sapiens} SCOP: a.211.1.2
Probab=96.77 E-value=0.0066 Score=52.54 Aligned_cols=49 Identities=16% Similarity=0.196 Sum_probs=39.6
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhCCC--CCCCcHHHHHHHHHhhhccCCC
Q 027623 19 NDASHDASHVWRVRDLALSLAREEGLA--SNPDSMEIVELAALLHDIGDYK 67 (221)
Q Consensus 19 ~~~~H~~~H~~rV~~~a~~ia~~~~~~--~~~~d~~~l~lAalLHDIg~~~ 67 (221)
..|-|++.|+..|++.+..+....++. .++.+...+.+||+.||+|..-
T Consensus 78 ~npYHN~~HA~dV~q~~~~ll~~~~l~~~l~~le~~alliAAl~HDv~HpG 128 (365)
T 1taz_A 78 KNPYHNQIHAADVTQTVHCFLLRTGMVHCLSEIELLAIIFAAAIHDYEHTG 128 (365)
T ss_dssp CCSSSSHHHHHHHHHHHHHHHHHHSGGGGSCHHHHHHHHHHHHHTTTTCCS
T ss_pred CCCCcCHHHHHHHHHHHHHHHHhhhHHhhCCHHHHHHHHHHHHHhcCCCCC
Confidence 358899999999999998888765431 2446778899999999999864
No 39
>1zkl_A HCP1, TM22, high-affinity CAMP-specific 3',5'-cyclic phosphodiesterase 7A; PDE, hydrolase; HET: IBM; 1.67A {Homo sapiens} PDB: 3g3n_A*
Probab=96.66 E-value=0.007 Score=52.17 Aligned_cols=61 Identities=20% Similarity=0.231 Sum_probs=42.9
Q ss_pred HHHHHHHHHhcC---CCCCCChHHHHHHHHHHHHHHHHhCC--CCCCCcHHHHHHHHHhhhccCCC
Q 027623 7 KAEKLVERSMKG---NDASHDASHVWRVRDLALSLAREEGL--ASNPDSMEIVELAALLHDIGDYK 67 (221)
Q Consensus 7 ~~~~~~~~~~~~---~~~~H~~~H~~rV~~~a~~ia~~~~~--~~~~~d~~~l~lAalLHDIg~~~ 67 (221)
.+..|+...-.+ ..|-|++.|+..|++.+..+....++ ..++.+...+.+||+.||+|..-
T Consensus 64 ~L~~Fl~~v~~~Y~~~npYHN~~HA~dV~q~~~~ll~~~~l~~~l~~le~~alliAAl~HDv~HpG 129 (353)
T 1zkl_A 64 KLRRFLVMIQEDYHSQNPYHNAVHAADVTQAMHCYLKEPKLANSVTPWDILLSLIAAATHDLDHPG 129 (353)
T ss_dssp HHHHHHHHHHHTSCTTSSSSSHHHHHHHHHHHHHHHTSHHHHTTCCHHHHHHHHHHHHHTTTTCCS
T ss_pred HHHHHHHHHHHccCCCCCCcCHHHHHHHHHHHHHHHhhhHHhhhCCHHHHHHHHHHHHHhccCCCC
Confidence 445555544333 35789999999999988877653311 11345778889999999999864
No 40
>3bg2_A DGTP triphosphohydrolase; structural genomics, NYSGXRC, target 10395N, triphosphohydro PSI-2, protein structure initiative; 1.95A {Leeuwenhoekiella blandensis}
Probab=96.64 E-value=0.0018 Score=57.48 Aligned_cols=45 Identities=33% Similarity=0.385 Sum_probs=33.6
Q ss_pred ChHHHHHHHHHHHHHHHHhCCC--C-----------CCCc-HHHHHHHHHhhhccCCCC
Q 027623 24 DASHVWRVRDLALSLAREEGLA--S-----------NPDS-MEIVELAALLHDIGDYKY 68 (221)
Q Consensus 24 ~~~H~~rV~~~a~~ia~~~~~~--~-----------~~~d-~~~l~lAalLHDIg~~~~ 68 (221)
++.|++.|+++|+.|+...+.. . .+.+ ..++.+|||+||||..++
T Consensus 65 RltHSL~V~~iar~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~lv~~a~L~HDiGH~PF 123 (444)
T 3bg2_A 65 RLTHSLEVSVVGRSLGRMVGKKLLEKYPHLEQVYGYKFNDFGAIVAAAALAHDIGNPPF 123 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHTTCCCHHHHHHHHHHHHHHTTTTCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccchhhHHHHHHHHHHhcccCCCCc
Confidence 4899999999999988764310 0 0011 379999999999999875
No 41
>3sk9_A Putative uncharacterized protein TTHB187; crispr, CAS, HD domain, nuclease, hydrolase; 1.80A {Thermus thermophilus HB8} PDB: 3skd_A
Probab=96.58 E-value=0.0077 Score=49.85 Aligned_cols=79 Identities=18% Similarity=0.212 Sum_probs=54.4
Q ss_pred hHHHHHHHHHHHHH------------HHHhCCCCCCCcHHHHHHHHHhhhccCCC-----CC------------------
Q 027623 25 ASHVWRVRDLALSL------------AREEGLASNPDSMEIVELAALLHDIGDYK-----YL------------------ 69 (221)
Q Consensus 25 ~~H~~rV~~~a~~i------------a~~~~~~~~~~d~~~l~lAalLHDIg~~~-----~~------------------ 69 (221)
..|+.-|+..|..+ ++..+... ..-..++...|.||||||.. +.
T Consensus 27 ~~HllDvAava~~L~~~~~~~~r~~la~~~g~~~-~~~~~~~~~~~~lHDiGK~~~~fq~~~~~~~~~l~~~g~~~~~~~ 105 (265)
T 3sk9_A 27 LAHMLDTAAVALAVLRMEPPRTRALYAEDWGLPE-EGALAWAAALVGLHDLGKASPVFQAGWEEGKERVQRAGLPFGELL 105 (265)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHTSCH-HHHHHHHHHHHTTTTGGGCSGGGCC--------------------
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHhCCCH-HHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHhhccCCccccC
Confidence 58999999999985 44445200 00146677788899999961 10
Q ss_pred --CCchHH--HHHHHHHhhCCCCHHHHHHHHHHHHHhcC
Q 027623 70 --RDPSEE--KIVENFLEDEGLEESKKMRILNIIKKMGF 104 (221)
Q Consensus 70 --~~~~~~--~~a~~~L~~~g~~~~~~~~V~~~I~~h~~ 104 (221)
.+|+.. ....++|.+.|++......|..+|..|+.
T Consensus 106 ~~~~Ha~aGa~ll~~~L~~~g~~~~~~~~ia~~I~gHHG 144 (265)
T 3sk9_A 106 DWVAHGVFTELFLRRLLKEKGLPERAANDLAAALGAHHG 144 (265)
T ss_dssp -CCCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTSTTTT
T ss_pred CCCChHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC
Confidence 023322 56667788889999888999999999974
No 42
>3bjc_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5, erectIle dysfunction, inhibitor design, allosteric enzyme, alternative splicing, CGMP binding; HET: WAN; 2.00A {Homo sapiens} SCOP: a.211.1.2 PDB: 3mf0_A 3lfv_A 2xss_A 2k31_A*
Probab=96.04 E-value=0.032 Score=53.54 Aligned_cols=60 Identities=17% Similarity=0.163 Sum_probs=44.0
Q ss_pred HHHHHHHHHhcC---CCCCCChHHHHHHHHHHHHHHHHhCCC--CCCCcHHHHHHHHHhhhccCC
Q 027623 7 KAEKLVERSMKG---NDASHDASHVWRVRDLALSLAREEGLA--SNPDSMEIVELAALLHDIGDY 66 (221)
Q Consensus 7 ~~~~~~~~~~~~---~~~~H~~~H~~rV~~~a~~ia~~~~~~--~~~~d~~~l~lAalLHDIg~~ 66 (221)
.+..|+...-.+ ..|-|++.|+..|++.+..+....++. .++.+...+.+||+.||+|..
T Consensus 597 ~l~~fl~~v~~~Y~~~~pyHN~~Ha~dV~q~~~~~l~~~~~~~~~~~~e~~a~~~aa~~HD~~Hp 661 (878)
T 3bjc_A 597 VLCRWILSVKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHR 661 (878)
T ss_dssp HHHHHHHHHHHTSCTTSSSSSHHHHHHHHHHHHHHHHTTCCGGGSCHHHHHHHHHHHHHTTTTCC
T ss_pred HHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHccCCCC
Confidence 344555543332 357799999999999999988765432 244577889999999999975
No 43
>2pgs_A Putative deoxyguanosinetriphosphate triphosphohyd; deoxyguanosinetriphosphate triphsphohydrolase, pseudomonas S PV. phaseolicola 1448A; 2.35A {Pseudomonas syringae PV}
Probab=95.97 E-value=0.0036 Score=55.66 Aligned_cols=45 Identities=27% Similarity=0.276 Sum_probs=33.6
Q ss_pred ChHHHHHHHHHHHHHHHHhCCC--CC---CCc----HHHHHHHHHhhhccCCCC
Q 027623 24 DASHVWRVRDLALSLAREEGLA--SN---PDS----MEIVELAALLHDIGDYKY 68 (221)
Q Consensus 24 ~~~H~~rV~~~a~~ia~~~~~~--~~---~~d----~~~l~lAalLHDIg~~~~ 68 (221)
++.|++.|+.+|+.|+...+.. .. ..+ ..++.+|||+||||..++
T Consensus 63 R~~Hsl~v~~ia~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~a~L~HDiGH~PF 116 (451)
T 2pgs_A 63 RLTHSLEVSCVGRSLGMRVGETLRAALPDWCDPSDLGMVVQSACLAHDIGNPPF 116 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTGGGSCTTCCHHHHHHHHHHHHHHTTTTCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHhhccCCCCc
Confidence 4899999999999998765410 00 011 158999999999999875
No 44
>2gz4_A Hypothetical protein ATU1052; structural genomics, PSI, protein structure initiative; 1.50A {Agrobacterium tumefaciens} SCOP: a.211.1.1
Probab=95.97 E-value=0.013 Score=46.66 Aligned_cols=35 Identities=29% Similarity=0.374 Sum_probs=27.1
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCC
Q 027623 24 DASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDY 66 (221)
Q Consensus 24 ~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~ 66 (221)
.-+|+.+|+.+|..++ -+ .|.. +.++||+||++-.
T Consensus 56 VAeHS~~va~ia~~l~--~~-----~~~r-~~~~aL~HD~~E~ 90 (207)
T 2gz4_A 56 VAQHCLIVETIFCRMC--PG-----ATPD-EMQMALLHDAPEY 90 (207)
T ss_dssp HHHHHHHHHHHHHHHC--TT-----CCHH-HHHHHHTTTTTHH
T ss_pred HHHHHHHHHHHHHHHC--CC-----CCHH-HHHHHHhcCchHh
Confidence 3589999999998885 12 4544 8888999998753
No 45
>3kq5_A Hypothetical cytosolic protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Coxiella burnetii}
Probab=95.89 E-value=0.0071 Score=52.33 Aligned_cols=39 Identities=8% Similarity=-0.106 Sum_probs=32.8
Q ss_pred hHHHHH-HHHHHHHHHHHhCCCCCCCc--HHHHHHHHHhhhccCC
Q 027623 25 ASHVWR-VRDLALSLAREEGLASNPDS--MEIVELAALLHDIGDY 66 (221)
Q Consensus 25 ~~H~~r-V~~~a~~ia~~~~~~~~~~d--~~~l~lAalLHDIg~~ 66 (221)
++|++. |+.+|..++..+.. ..+ ..++..||||||||+.
T Consensus 77 LeHtLerVa~~A~~l~~~YP~---~~~~Er~~l~~aALLHDIGKl 118 (393)
T 3kq5_A 77 MNEGLLRGVNSLNHYIQNHPE---ATPLERYALFSAGLLLEVAHA 118 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT---CCHHHHHHHHHHHHHTTTTHH
T ss_pred HHHHHHHHHHHHHHHHHhCCC---CCchHHHHHHHHHHHhccchh
Confidence 589999 99999999998742 122 6699999999999985
No 46
>3qi3_A High affinity CGMP-specific 3',5'-cyclic phosphod 9A; mutation, glutamine switch, hydrolase-hydrolase inhibitor CO; HET: PDB; 2.30A {Homo sapiens} PDB: 3qi4_A*
Probab=95.57 E-value=0.078 Score=47.84 Aligned_cols=60 Identities=18% Similarity=0.204 Sum_probs=42.5
Q ss_pred HHHHHHHHhcC--CCCCCChHHHHHHHHHHHHHHHHhCCC--CCCCcHHHHHHHHHhhhccCCC
Q 027623 8 AEKLVERSMKG--NDASHDASHVWRVRDLALSLAREEGLA--SNPDSMEIVELAALLHDIGDYK 67 (221)
Q Consensus 8 ~~~~~~~~~~~--~~~~H~~~H~~rV~~~a~~ia~~~~~~--~~~~d~~~l~lAalLHDIg~~~ 67 (221)
+..|+...-.+ ..|-|++.|+.-|.+.+..+....++. .++.+...+.+||+.||++..-
T Consensus 235 L~rFL~~Ve~~Y~~nPYHN~~HA~DV~Q~~~~ll~~~~l~~~ls~lE~lAlliAAl~HDvdHPG 298 (533)
T 3qi3_A 235 LRRWLFCVHDNYRNNPFHNFRHCFCVAQMMYSMVWLCSLQEKFSQTDILILMTAAICHDLDHPG 298 (533)
T ss_dssp HHHHHHHHHHTSCCCSSSSHHHHHHHHHHHHHHHHHTTGGGTSCHHHHHHHHHHHHHTTTTCCS
T ss_pred HHHHHHHHHHccCCCCCcChHHHhHHHHHHHHHHHhccchhhccHHHHHHHHHHHHHhccCCCC
Confidence 44444433222 357899999999999988877654321 1345678899999999999863
No 47
>3aql_A Poly(A) polymerase; transferase/RNA, ATP-binding, nucleotide-binding, RNA-bindin transferase, nucleotidyltransferase, ATP binding, A-phospho; 3.00A {Escherichia coli} PDB: 3aqn_A* 3aqk_A 3aqm_A
Probab=95.40 E-value=0.019 Score=50.52 Aligned_cols=53 Identities=6% Similarity=-0.076 Sum_probs=42.1
Q ss_pred HHHHHHHHHhh-hccCCC-----C-C----CCchHH--HHHHHHHhhCCCCHHHHHHHHHHHHHhc
Q 027623 51 MEIVELAALLH-DIGDYK-----Y-L----RDPSEE--KIVENFLEDEGLEESKKMRILNIIKKMG 103 (221)
Q Consensus 51 ~~~l~lAalLH-DIg~~~-----~-~----~~~~~~--~~a~~~L~~~g~~~~~~~~V~~~I~~h~ 103 (221)
..++.+||||| ||++.. . . .+|... ..++++++.+++|...+..|.+++..|.
T Consensus 286 ~~~L~lAALLH~di~K~~~~~~~~~G~~~~~~h~~~ga~~a~~~~~rl~l~~r~~~~v~~lv~lq~ 351 (415)
T 3aql_A 286 NPAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQL 351 (415)
T ss_dssp CHHHHHHHHTHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHH
T ss_pred CHHHHHhHhcCcchhhhhhhhhhccCCCchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 46888999999 998851 0 1 134433 8899999999999999999999999883
No 48
>3itu_A CGMP-dependent 3',5'-cyclic phosphodiesterase; Zn-binding, all-alpha-helical, alternative splicing, hydrolase, membrane, polymorphism; HET: IBM; 1.58A {Homo sapiens} PDB: 3itm_A* 1z1l_A
Probab=95.20 E-value=0.03 Score=48.05 Aligned_cols=60 Identities=15% Similarity=0.211 Sum_probs=43.2
Q ss_pred HHHHHHHHHhcC--CCCCCChHHHHHHHHHHHHHHHHhCCC--CCCCcHHHHHHHHHhhhccCC
Q 027623 7 KAEKLVERSMKG--NDASHDASHVWRVRDLALSLAREEGLA--SNPDSMEIVELAALLHDIGDY 66 (221)
Q Consensus 7 ~~~~~~~~~~~~--~~~~H~~~H~~rV~~~a~~ia~~~~~~--~~~~d~~~l~lAalLHDIg~~ 66 (221)
.+..|+...-.+ ..|-|++.|+.-|.+.+..+....++. .++.+...+.+||+.||+|..
T Consensus 64 ~L~~Fl~~v~~~Y~~npYHN~~HA~dV~q~~~~ll~~~~l~~~l~~le~~alliAal~HDv~Hp 127 (345)
T 3itu_A 64 TLARFCLMVKKGYRDPPYHNWMHAFSVSHFCYLLYKNLELTNYLEDIEIFALFISCMCHDLDHR 127 (345)
T ss_dssp HHHHHHHHHHHTCCCCSSSSHHHHHHHHHHHHHHHHHHCGGGTSCHHHHHHHHHHHHHTTTTCC
T ss_pred HHHHHHHHHHHccCCCCCcCcHHHHHHHHHHHHHHhccchhhhhhHHHHHHHHHHHHHhcCCCC
Confidence 344444433222 357899999999999998887765431 234567889999999999986
No 49
>3v93_A Cyclic nucleotide specific phosphodiesterase; parasite, phosphodiesterases,, hydrolase; 2.00A {Trypanosoma cruzi} PDB: 3v94_A*
Probab=95.13 E-value=0.029 Score=48.10 Aligned_cols=62 Identities=26% Similarity=0.224 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhcC--CCCCCChHHHHHHHHHHHHHHHHhC-C--CCCCCcHHHHHHHHHhhhccCCC
Q 027623 6 RKAEKLVERSMKG--NDASHDASHVWRVRDLALSLAREEG-L--ASNPDSMEIVELAALLHDIGDYK 67 (221)
Q Consensus 6 ~~~~~~~~~~~~~--~~~~H~~~H~~rV~~~a~~ia~~~~-~--~~~~~d~~~l~lAalLHDIg~~~ 67 (221)
+++..|+...-.+ ..|-|++.|+.-|.+.+..+....+ . ..++.+...+.+||+.||+|..-
T Consensus 80 ~~L~~fl~~v~~~Y~~npYHN~~HA~dV~q~~~~ll~~~~~~~~~l~~le~~alliAAl~HDvdHpG 146 (345)
T 3v93_A 80 QKWAFLVAAVENNYRPNPYHNAIHAADVLQGTFSLVSAAKPLMEHLTPLECKAAAFAALTHDVCHPG 146 (345)
T ss_dssp HHHHHHHHHHHHTSCCCSSSSHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHTTTTCCS
T ss_pred HHHHHHHHHHHHhCCCCCCcChHHHHHHHHHHHHHHHhchHhhhcCCHHHHHHHHHHHHHhcCCCCC
Confidence 4555665543333 4578999999999999988876544 1 01346778999999999999863
No 50
>1vfg_A A-adding enzyme, poly A polymerase; transferase, RNA, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: APC; 2.80A {Aquifex aeolicus} SCOP: a.173.1.1 d.218.1.4
Probab=94.86 E-value=0.03 Score=48.72 Aligned_cols=45 Identities=16% Similarity=0.087 Sum_probs=39.9
Q ss_pred CcHHHHHHHHHhhhccCCCCCCCchHHHHHHHHHhhCCCCHHHHHHHHHHHHHhc
Q 027623 49 DSMEIVELAALLHDIGDYKYLRDPSEEKIVENFLEDEGLEESKKMRILNIIKKMG 103 (221)
Q Consensus 49 ~d~~~l~lAalLHDIg~~~~~~~~~~~~~a~~~L~~~g~~~~~~~~V~~~I~~h~ 103 (221)
.+..++.+||||||+|+. .+.++++++++|...++.|..+|..|.
T Consensus 254 ~~~~~l~laaLlhdi~~~----------~a~~~~~rL~ls~~~~~~v~~Lv~~h~ 298 (390)
T 1vfg_A 254 IDYGWLYLLILISNLDYE----------RGKHFLEEMSAPSWVRETYKFMKFKLG 298 (390)
T ss_dssp CCHHHHHHHHHHCSCCSS----------TTHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHccCCHH----------HHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 456789999999999963 578999999999999999999998884
No 51
>3hr1_A CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphodiesterase 10A; PDE 10A, PDE10 inhibitors, allosteric enzyme, alternative splicing; HET: PF9; 1.53A {Rattus norvegicus} PDB: 3hqy_A* 3hqz_A* 3hqw_A*
Probab=94.80 E-value=0.05 Score=47.23 Aligned_cols=60 Identities=15% Similarity=0.108 Sum_probs=43.1
Q ss_pred HHHHHHHHHhcC--CCCCCChHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCC
Q 027623 7 KAEKLVERSMKG--NDASHDASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDY 66 (221)
Q Consensus 7 ~~~~~~~~~~~~--~~~~H~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~ 66 (221)
.+..|+...-.+ ..|-|++.|+.-|++.+..+........++.+...+.+||+.||+|..
T Consensus 93 ~L~~Fl~~v~~~Y~~npYHN~~HA~dV~q~~~~ll~~~~~~lt~le~~alliAAl~HDvdHp 154 (380)
T 3hr1_A 93 KLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQNNNGLFTDLERKGLLIACLCHDLDHR 154 (380)
T ss_dssp HHHHHHHHHHHTSCCCSSSSHHHHHHHHHHHHHHHHTSTTTSCHHHHHHHHHHHHHTTTTCC
T ss_pred HHHHHHHHHHHccCCCCCcCcHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHccCCCC
Confidence 344454433332 357899999999999999888654211234577889999999999986
No 52
>3dyn_A High affinity CGMP-specific 3',5'-cyclic phosphod 9A; phophodiestrase, enzyme mechanism, hydrolase, manganes binding, phosphoprotein; HET: PCG IBM; 2.10A {Homo sapiens} SCOP: a.211.1.2 PDB: 3dyl_A* 3dy8_A* 3dyq_A* 3dys_A* 3jsi_A* 3jsw_A* 2yy2_A* 2hd1_A* 3k3e_A* 3k3h_A* 4gh6_A* 3n3z_A*
Probab=94.78 E-value=0.029 Score=47.84 Aligned_cols=49 Identities=22% Similarity=0.279 Sum_probs=37.7
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhCCC--CCCCcHHHHHHHHHhhhccCCC
Q 027623 19 NDASHDASHVWRVRDLALSLAREEGLA--SNPDSMEIVELAALLHDIGDYK 67 (221)
Q Consensus 19 ~~~~H~~~H~~rV~~~a~~ia~~~~~~--~~~~d~~~l~lAalLHDIg~~~ 67 (221)
..|-|++.|+..|.+.+..+....++. .++.+...+.+||+.||+|..-
T Consensus 71 ~npYHN~~Ha~dV~q~~~~~l~~~~l~~~l~~le~~alliAal~HDv~HpG 121 (329)
T 3dyn_A 71 NNPFHNFRHCFCVAQMMYSMVWLCSLQEKFSQTDILILMTAAICHDLDHPG 121 (329)
T ss_dssp CCSSSSHHHHHHHHHHHHHHHHHTTHHHHSCHHHHHHHHHHHHHTTTTCCS
T ss_pred CCCCcCcHHHhHHHHHHHHHHHhhhHhhcCCHHHHHHHHHHHHHhcCCCCC
Confidence 358899999999999988776543321 1345778899999999999863
No 53
>3m5f_A Metal dependent phosphohydrolase; CAS3, prokaryotic immune system, HD-motif, structural genomics, PSI-2; 2.30A {Methanocaldococcus jannaschii} PDB: 3s4l_A
Probab=94.23 E-value=0.15 Score=41.46 Aligned_cols=81 Identities=11% Similarity=-0.064 Sum_probs=47.0
Q ss_pred hHHHHHHHHHHHHHHHH--------h---CCCCCC-CcHHHHHHHHHhhhccCCC------C--------CCCchHH--H
Q 027623 25 ASHVWRVRDLALSLARE--------E---GLASNP-DSMEIVELAALLHDIGDYK------Y--------LRDPSEE--K 76 (221)
Q Consensus 25 ~~H~~rV~~~a~~ia~~--------~---~~~~~~-~d~~~l~lAalLHDIg~~~------~--------~~~~~~~--~ 76 (221)
.+|+..|+.....+.+. . +...+. .-..++.+||+|||+|+.. + ...|+-. .
T Consensus 18 ~EHt~dvL~~~e~Lk~~y~~sI~r~L~~~~i~Ld~e~~~~ll~~a~llHDiGKa~~~FQ~k~l~~~~~~~~~~He~lSa~ 97 (244)
T 3m5f_A 18 IDHVNDMVKYWERIKYRYLKTIKRALEALNIKLDIEKVDEFMKILIKLHDIGKASKIYQRAIINDQEKLMGFRHELVSAY 97 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCCCHHHHHHHHHHHHHHTTGGGGBHHHHHHHHCTTSCCSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHhccccCHHHHHHHHHHHHHHcccccCCHHHHHHHHhccCCCCCCChHHHHHH
Confidence 58999999888865221 1 110000 0146788999999999962 1 1123322 4
Q ss_pred HHHHHHhhCCCCHHHHHHHHHHHHHhcCC
Q 027623 77 IVENFLEDEGLEESKKMRILNIIKKMGFK 105 (221)
Q Consensus 77 ~a~~~L~~~g~~~~~~~~V~~~I~~h~~~ 105 (221)
....++.+.+-++.....+..+|..|+..
T Consensus 98 fl~~~l~~~~~~~~la~lialAI~sHH~~ 126 (244)
T 3m5f_A 98 YTYHILLKKFGDKNLAFIGALTVMLHHEP 126 (244)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHTTTSC
T ss_pred HHHHHHhhccchHHHHHHHHHHHHHhCHH
Confidence 44555544333333356788899998654
No 54
>3g4g_A DPDE3, PDE43, CAMP-specific 3',5'-cyclic phosphodiesterase 4D; PDE4D, UCR2, alternative splicing, cytoplasm, cytoskeleton, hydrolase, membrane; HET: D71; 2.30A {Homo sapiens} PDB: 3g45_A*
Probab=93.94 E-value=0.069 Score=46.97 Aligned_cols=61 Identities=15% Similarity=0.038 Sum_probs=43.0
Q ss_pred HHHHHHHHHhcCC---CCCCChHHHHHHHHHHHHHHHHhCCC--CCCCcHHHHHHHHHhhhccCCC
Q 027623 7 KAEKLVERSMKGN---DASHDASHVWRVRDLALSLAREEGLA--SNPDSMEIVELAALLHDIGDYK 67 (221)
Q Consensus 7 ~~~~~~~~~~~~~---~~~H~~~H~~rV~~~a~~ia~~~~~~--~~~~d~~~l~lAalLHDIg~~~ 67 (221)
.+..|+...-.++ .|-|++.|+.-|++.+..+....++. .++.+...+.+||+.||+|..-
T Consensus 143 ~L~~FL~~ve~~Y~~~~pYHN~~HA~dV~Q~~~~ll~~~~l~~~ls~le~lalliAAl~HDvdHpG 208 (421)
T 3g4g_A 143 TLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPG 208 (421)
T ss_dssp HHHHHHHHHHHTSCSSCSSSSHHHHHHHHHHHHHHHTCGGGTTTSCHHHHHHHHHHHHHTTTTCCS
T ss_pred HHHHHHHHHHHcccCCCCCcCcHHHhHHHHHHHHHHhhhhhhhhcchHHHHHHHHHHHHhcCCCCC
Confidence 3445555443333 47899999999999998887644321 1345677899999999999863
No 55
>3ecm_A High affinity CAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A...; phosphodiesterase 8A PDE8A inhibitor selectivity; 1.90A {Homo sapiens} SCOP: a.211.1.0 PDB: 3ecn_A*
Probab=93.78 E-value=0.044 Score=46.85 Aligned_cols=60 Identities=15% Similarity=0.175 Sum_probs=41.0
Q ss_pred HHHHHHHHhcC---CCCCCChHHHHHHHHHHHHHHHHhCC--CCCCCcHHHHHHHHHhhhccCCC
Q 027623 8 AEKLVERSMKG---NDASHDASHVWRVRDLALSLAREEGL--ASNPDSMEIVELAALLHDIGDYK 67 (221)
Q Consensus 8 ~~~~~~~~~~~---~~~~H~~~H~~rV~~~a~~ia~~~~~--~~~~~d~~~l~lAalLHDIg~~~ 67 (221)
+..|+...-.+ ..|-|++.|+.-|.+.+..+....++ ..++.+...+.+||+.||+|..-
T Consensus 57 L~~fl~~v~~~Y~~~npYHN~~Ha~dV~q~~~~~l~~~~l~~~l~~~e~~all~Aal~HD~~HpG 121 (338)
T 3ecm_A 57 LRSWLQIIEANYHSSNPYHNSTHSADVLHATAYFLSKERIKETLDPIDEVAALIAATIHDVDHPG 121 (338)
T ss_dssp HHHHHHHHHHTSCTTSSSSSHHHHHHHHHHHHHHHTSHHHHTTSCHHHHHHHHHHHHHTTTTCCS
T ss_pred HHHHHHHHHHhcCCCCCCcCcHHHHHHHHHHHHHHHhcchhhhhhHHHHHHHHHHHHHhccCCCC
Confidence 44555443333 34789999999999988776643211 11345678899999999999863
No 56
>1miw_A TRNA CCA-adding enzyme; tRNA nucleotidyltransferase, translation, transferase; HET: ATP; 3.00A {Geobacillus stearothermophilus} SCOP: a.173.1.1 d.218.1.4 PDB: 1miv_A* 1miy_A*
Probab=93.57 E-value=0.078 Score=46.38 Aligned_cols=43 Identities=19% Similarity=0.076 Sum_probs=37.9
Q ss_pred HHHHHHHHhhhccCCCCCCCchHHHHHHHHHhhCCCCHHHHHHHHHHHHHhcC
Q 027623 52 EIVELAALLHDIGDYKYLRDPSEEKIVENFLEDEGLEESKKMRILNIIKKMGF 104 (221)
Q Consensus 52 ~~l~lAalLHDIg~~~~~~~~~~~~~a~~~L~~~g~~~~~~~~V~~~I~~h~~ 104 (221)
.++.+|++|||||+. .+..+++++++|...++.|..+|..|..
T Consensus 248 ~~l~~aaLlhdigk~----------~a~~~l~rLkls~~~~~~v~~Lv~~~~~ 290 (404)
T 1miw_A 248 REERWALLCHALGVQ----------ESRPFLRAWKLPNKVVDEAGAILTALAD 290 (404)
T ss_dssp HHHHHHHHHHHHTCS----------CHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhCCHH----------HHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence 568899999999973 4889999999999999999999998754
No 57
>3ibj_A CGMP-dependent 3',5'-cyclic phosphodiesterase; PDE2A, GAF-domains, allosteric regulation hydrolase, membrane; 3.02A {Homo sapiens}
Probab=93.40 E-value=0.12 Score=48.06 Aligned_cols=60 Identities=15% Similarity=0.211 Sum_probs=43.0
Q ss_pred HHHHHHHHHhcC--CCCCCChHHHHHHHHHHHHHHHHhCCC--CCCCcHHHHHHHHHhhhccCC
Q 027623 7 KAEKLVERSMKG--NDASHDASHVWRVRDLALSLAREEGLA--SNPDSMEIVELAALLHDIGDY 66 (221)
Q Consensus 7 ~~~~~~~~~~~~--~~~~H~~~H~~rV~~~a~~ia~~~~~~--~~~~d~~~l~lAalLHDIg~~ 66 (221)
.+..|+...-.+ +.|-|++.|..-|.+.+..+....++. .++.+...+.+||+.||++..
T Consensus 425 ~l~~fl~~v~~~y~~~pyHN~~Ha~dv~q~~~~~~~~~~~~~~~~~~e~~a~~~aa~~HD~~H~ 488 (691)
T 3ibj_A 425 TLARFCLMVKKGYRDPPYHNWMHAFSVSHFCYLLYKNLELTNYLEDIEIFALFISCMCHDLDHR 488 (691)
T ss_dssp HHHHHHHHHHHTSBCCSSSBHHHHHHHHHHHHHHHHHHTGGGTSCHHHHHHHHHHHHHTTTTCC
T ss_pred HHHHHHHHHHhcCCCCCCcCcHHHHHHHHHHHHHHhccchhhhCCHHHHHHHHHHHHHccCCCC
Confidence 344454433222 368899999999999998887754431 234567889999999999985
No 58
>2ibn_A Inositol oxygenase; reductase, DIIRON, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: MSE I1N; 1.50A {Homo sapiens} SCOP: a.211.1.4
Probab=91.26 E-value=0.18 Score=40.82 Aligned_cols=42 Identities=21% Similarity=0.335 Sum_probs=24.4
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCC
Q 027623 19 NDASHDASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDY 66 (221)
Q Consensus 19 ~~~~H~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~ 66 (221)
.||.-.+..+.-.++.|..+- ..| .|.+-+.++||+||+|+.
T Consensus 52 SDPD~~v~ql~HaLQTAe~ar-~dg-----~d~dw~~laaLlHDLGkl 93 (250)
T 2ibn_A 52 SDPDVDFPNSFHAFQTAEGIR-KAH-----PDKDWFHLVGLLHDLGKV 93 (250)
T ss_dssp TC---CCCHHHHHHHHHHHHH-HHS-----TTCHHHHHHHHHTTGGGH
T ss_pred cCCCCcccHHHHHHHHHHHHH-HhC-----cChhHHHHHHHHhccHhh
Confidence 355555444444444444443 335 455788899999999993
No 59
>1ou5_A TRNA CCA-adding enzyme, tRNA-nucleotidyltransferase; polymerase, translation; 3.40A {Homo sapiens} SCOP: a.173.1.1 d.218.1.4
Probab=90.00 E-value=0.08 Score=46.99 Aligned_cols=42 Identities=21% Similarity=0.097 Sum_probs=37.0
Q ss_pred HHHHHHHHHhhhccCCCCCCCchHHHHHHHHHhhCCCCHHHHHHHHHHHHHhcC
Q 027623 51 MEIVELAALLHDIGDYKYLRDPSEEKIVENFLEDEGLEESKKMRILNIIKKMGF 104 (221)
Q Consensus 51 ~~~l~lAalLHDIg~~~~~~~~~~~~~a~~~L~~~g~~~~~~~~V~~~I~~h~~ 104 (221)
..++.+||||||+++ +..+++++++|...++.|+.+|..|..
T Consensus 305 ~~~l~lAaLlhDi~k------------a~~i~~rLkls~~~~~~v~~Lv~~h~~ 346 (448)
T 1ou5_A 305 KPVTLLASLFKVQDD------------VTKLDLRLKIAKEEKNLGLFIVKNRKD 346 (448)
T ss_dssp CHHHHHGGGCCSTTT------------THHHHHHHCCCTTHHHHHHHHTTTTTT
T ss_pred CHHHHHHHHhcChHH------------HHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 458999999999986 577888999999999999999998864
No 60
>1so2_A CGMP-inhibited 3',5'-cyclic phosphodiesterase B; PDE3B phosphodiesterase, hydrolase; HET: HG9 666; 2.40A {Homo sapiens} SCOP: a.211.1.2 PDB: 1soj_A*
Probab=89.88 E-value=0.39 Score=42.15 Aligned_cols=35 Identities=14% Similarity=0.062 Sum_probs=24.4
Q ss_pred HHHHHHHHHHhcCC--CCCCChHHHHHHHHHHHHHHH
Q 027623 6 RKAEKLVERSMKGN--DASHDASHVWRVRDLALSLAR 40 (221)
Q Consensus 6 ~~~~~~~~~~~~~~--~~~H~~~H~~rV~~~a~~ia~ 40 (221)
+.+..|+...-.++ .|-|++.|+.-|++.+..+..
T Consensus 65 ~~L~~Fl~~v~~~Y~~nPYHN~~HA~DV~Q~~~~lL~ 101 (420)
T 1so2_A 65 QQFMNYFRALENGYRDIPYHNRIHATDVLHAVWYLTT 101 (420)
T ss_dssp HHHHHHHHHHHTTSCSCSSSSHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCCCCcCHHHHHHHHHHHHHHHh
Confidence 34555555443333 578999999999998887753
No 61
>3nr1_A HD domain-containing protein 3; stringent response, pyrophosphohydrolase, HD (histidine and acid) family, PPGPP hydrolase, hydrolase; 1.90A {Homo sapiens}
Probab=75.75 E-value=4.4 Score=31.02 Aligned_cols=56 Identities=23% Similarity=0.284 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHhcCCC--C--C-CChHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCC
Q 027623 3 SRVRKAEKLVERSMKGND--A--S-HDASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDY 66 (221)
Q Consensus 3 ~~i~~~~~~~~~~~~~~~--~--~-H~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~ 66 (221)
..+.++..|+.+...+.. . + -=+.|..+|+.... ...+. .| .-..+||||||+.-.
T Consensus 5 ~~l~~A~~~A~~aH~gQ~rk~~~G~PYi~Hpl~VA~il~---~~~~~----~d-~~~i~AALLHDvvED 65 (178)
T 3nr1_A 5 AQLLEAADFAARKHRQQRRKDPEGTPYINHPIGVARILT---HEAGI----TD-IVVLQAALLHDTVED 65 (178)
T ss_dssp HHHHHHHHHHHHHTTTCBCSSTTCCBTTHHHHHHHHHHH---HTSCC----CC-HHHHHHHHHTTHHHH
T ss_pred HHHHHHHHHHHHHcccCcCCCCCCCcHHHHHHHHHHHHH---HHcCC----CC-HHHHHHHHhhhHHhc
Confidence 567888889888765441 1 2 23689999986552 23331 24 457789999999864
No 62
>1vj7_A Bifunctional RELA/SPOT; HD domain, alpha beta 2-layer sandwich, helix bundle, mangan PPG2':3'P, (P)PPGPP, PPGPP; HET: GDP GPX; 2.10A {Streptococcus dysgalactiae subsp} SCOP: a.211.1.1 d.218.1.8
Probab=74.14 E-value=5.6 Score=34.48 Aligned_cols=54 Identities=15% Similarity=0.073 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHhcCC--CCCCC-hHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCC
Q 027623 3 SRVRKAEKLVERSMKGN--DASHD-ASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDY 66 (221)
Q Consensus 3 ~~i~~~~~~~~~~~~~~--~~~H~-~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~ 66 (221)
+.+.++..|+.+...+. .+|.. +.|...|+..... .+ .|.+ ..+||||||+.-.
T Consensus 26 ~~l~~A~~~A~~aH~gQ~rksGePYi~Hpl~VA~iLa~----l~-----~D~~-~i~AALLHDvvED 82 (393)
T 1vj7_A 26 AFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILAD----LH-----LDAV-TVACGFLHDVVED 82 (393)
T ss_dssp HHHHHHHHHHHHHTTTCBCTTSCBTTHHHHHHHHHHHH----TT-----CCHH-HHHHHHHTTHHHH
T ss_pred HHHHHHHHHHHHHhccCcCCCCCcHHHHHHHHHHHHHH----hc-----CCHH-HHHHHHhhhHHhc
Confidence 45677777777765332 23332 7899999877543 34 4554 5689999998754
No 63
>3nqw_A CG11900; stringent response, pyrophosphohydrolase, HD (histidine and acid) family ,PPGPP hydrolase, hydrolase; 2.90A {Drosophila melanogaster}
Probab=73.07 E-value=5 Score=30.71 Aligned_cols=56 Identities=20% Similarity=0.192 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHhcCCC----CCC-ChHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCC
Q 027623 3 SRVRKAEKLVERSMKGND----ASH-DASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDY 66 (221)
Q Consensus 3 ~~i~~~~~~~~~~~~~~~----~~H-~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~ 66 (221)
+.+.++..|+.+...+.. ++. =+.|..+|+.... ...+. .|. -..+||||||+.-.
T Consensus 7 ~~l~~A~~~A~~~H~gQ~rk~~~G~pyi~Hpl~VA~ila---~~l~~----~D~-~~i~AAlLHDvvED 67 (179)
T 3nqw_A 7 AKFMECLQYAAFKHRQQRRKDPQETPYVNHVINVSTILS---VEACI----TDE-GVLMAALLHDVVED 67 (179)
T ss_dssp HHHHHHHHHHHHHSTTCBCSSSSCCBTHHHHHHHHHHHH---TTTCC----CCH-HHHHHHHTTTHHHH
T ss_pred HHHHHHHHHHHHHhccCcCCCCCCCcHHHHHHHHHHHHH---HHcCC----CCH-HHHHHHHhhhHHhc
Confidence 568888899888765431 233 4689999886543 23331 254 47789999999864
No 64
>3sk7_A Protein SEQA; sequestration, negative regulator, DNA replication initiatio binding, replication inhibitor; HET: FME; 1.50A {Vibrio cholerae}
Probab=64.64 E-value=5.8 Score=28.19 Aligned_cols=23 Identities=13% Similarity=0.247 Sum_probs=20.9
Q ss_pred HHHHHHHhhCCCCHHHHHHHHHH
Q 027623 76 KIVENFLEDEGLEESKKMRILNI 98 (221)
Q Consensus 76 ~~a~~~L~~~g~~~~~~~~V~~~ 98 (221)
.+..+++..+|+|++.++.||..
T Consensus 93 ~ml~~vm~~mg~~~~lie~V~~~ 115 (116)
T 3sk7_A 93 QMVEQVMVRMGFPSDIIEKVTHS 115 (116)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHHHHHHhc
Confidence 78899999999999999999864
No 65
>1j3e_A SEQA protein; protein-DNA complex, recognition of hemimethylated DNA, mismatched DNA, replication; HET: 6MA; 2.50A {Escherichia coli} SCOP: d.228.1.1 PDB: 1iu3_C
Probab=64.20 E-value=4.8 Score=28.61 Aligned_cols=24 Identities=8% Similarity=0.239 Sum_probs=21.2
Q ss_pred HHHHHHHhhCCCCHHHHHHHHHHH
Q 027623 76 KIVENFLEDEGLEESKKMRILNII 99 (221)
Q Consensus 76 ~~a~~~L~~~g~~~~~~~~V~~~I 99 (221)
.+..++|..+|+|++.++.||..|
T Consensus 92 ~ml~~vm~~mg~~~~lie~v~~~i 115 (115)
T 1j3e_A 92 SMIEHIMQSMQFPAELIEKVCGTI 115 (115)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCHHHHHHHHhcC
Confidence 788999999999999999998643
No 66
>2huo_A Inositol oxygenase; protein-substrate complex, HD domain fold, oxidoreductase; HET: INS; 2.00A {Mus musculus} SCOP: a.211.1.4 PDB: 3bxd_A*
Probab=64.15 E-value=7.2 Score=32.03 Aligned_cols=43 Identities=21% Similarity=0.336 Sum_probs=31.3
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHhhhccCC
Q 027623 18 GNDASHDASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDY 66 (221)
Q Consensus 18 ~~~~~H~~~H~~rV~~~a~~ia~~~~~~~~~~d~~~l~lAalLHDIg~~ 66 (221)
..||.-++..+.-.++.|..|-+. + -+.+=+.+.+|+||.|+.
T Consensus 90 eSDPD~dl~qi~H~lQTAEaiR~d-~-----pp~dW~qLtGLiHDLGKv 132 (289)
T 2huo_A 90 ESDPDVDFPNSFHAFQTAEGIRKA-H-----PDKDWFHLVGLLHDLGKI 132 (289)
T ss_dssp SSCTTCCSCHHHHHHHHHHHHHHH-C-----TTCHHHHHHHHHTTGGGG
T ss_pred CcCCccchhHHHHHHHHHHHHHHh-C-----CCcchheeeeecccchhh
Confidence 346677776666777777777655 4 233679999999999985
No 67
>1lrr_A SEQA protein; protein-DNA complex, replication, methylated GATC, replication inhibitor/DNA complex; HET: 6MA; 2.65A {Escherichia coli} SCOP: d.228.1.1
Probab=62.94 E-value=5.2 Score=29.05 Aligned_cols=24 Identities=8% Similarity=0.239 Sum_probs=21.2
Q ss_pred HHHHHHHhhCCCCHHHHHHHHHHH
Q 027623 76 KIVENFLEDEGLEESKKMRILNII 99 (221)
Q Consensus 76 ~~a~~~L~~~g~~~~~~~~V~~~I 99 (221)
.+..++|..+|||++.++.||..|
T Consensus 108 ~ml~~vm~~mg~~~~lie~V~~~i 131 (131)
T 1lrr_A 108 SMIEHIMQSMQFPAELIEKVCGTI 131 (131)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCHHHHHHHHhcC
Confidence 788999999999999999998643
No 68
>3fmt_A Protein SEQA; protein-DNA complex, hemimethylated GATC, DNA replication; HET: 6MA; 2.98A {Escherichia coli}
Probab=51.56 E-value=13 Score=27.91 Aligned_cols=24 Identities=8% Similarity=0.239 Sum_probs=21.5
Q ss_pred HHHHHHHhhCCCCHHHHHHHHHHH
Q 027623 76 KIVENFLEDEGLEESKKMRILNII 99 (221)
Q Consensus 76 ~~a~~~L~~~g~~~~~~~~V~~~I 99 (221)
.+..+++..+|||++.++.||..|
T Consensus 139 ~ml~~vm~~mg~~~~lie~V~~~i 162 (162)
T 3fmt_A 139 SMIEHIMQSMQFPAELIEKVCGTI 162 (162)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCHHHHHHHHhcC
Confidence 688999999999999999998754
No 69
>1wpn_A Manganese-dependent inorganic pyrophosphatase; metal binding, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.107.1.1
Probab=49.83 E-value=22 Score=26.78 Aligned_cols=43 Identities=14% Similarity=0.181 Sum_probs=31.4
Q ss_pred cHHHHHHHHHhhhccCCCCCCCchHH-HHHHHHHhhCCCCHHHH
Q 027623 50 SMEIVELAALLHDIGDYKYLRDPSEE-KIVENFLEDEGLEESKK 92 (221)
Q Consensus 50 d~~~l~lAalLHDIg~~~~~~~~~~~-~~a~~~L~~~g~~~~~~ 92 (221)
+...+.+++++-|+|..++....+.. +.|..+++..|.+...+
T Consensus 137 ~~A~~l~~gI~~DTg~f~~~~tt~~~~~~aa~L~~~~g~d~~~i 180 (188)
T 1wpn_A 137 EIAGLMLSAIISDSLLFKSPTCTDQDVAAAKELAEIAGVDAEEY 180 (188)
T ss_dssp HHHHHHHHHHHHHHTTTTSTTCCHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHcCCCHHHH
Confidence 45667889999999999875544544 66666665789887654
No 70
>3dma_A Exopolyphosphatase-related protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.25A {Bacteroides fragilis}
Probab=43.95 E-value=59 Score=27.22 Aligned_cols=42 Identities=17% Similarity=0.359 Sum_probs=29.1
Q ss_pred cHHHHHHHHHhhhccCCCCCCCchHH-HHHHHHHhhCCCCHHHH
Q 027623 50 SMEIVELAALLHDIGDYKYLRDPSEE-KIVENFLEDEGLEESKK 92 (221)
Q Consensus 50 d~~~l~lAalLHDIg~~~~~~~~~~~-~~a~~~L~~~g~~~~~~ 92 (221)
+...+.+++++.|+|..++....+.. ..|..++ +.|.+...+
T Consensus 165 ~~At~L~~GI~tDTg~F~~~~Tt~~t~~aaa~L~-~~Gad~~~i 207 (343)
T 3dma_A 165 EGAECIYTGMMTDTGGFTYNSNNREIYFIISELL-SKGIDKDDI 207 (343)
T ss_dssp HHHHHHHHHHHHHTTTTTSSCCCHHHHHHHHHHH-TTTCCHHHH
T ss_pred HHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHH-HcCCCHHHH
Confidence 45677899999999999876555544 4444444 467776544
No 71
>2frh_A SARA, staphylococcal accessory regulator A; winged-helix protein, divalent metal binding, transcription; 2.50A {Staphylococcus aureus} SCOP: a.4.5.28 PDB: 2fnp_A 1fzp_D
Probab=35.69 E-value=38 Score=23.47 Aligned_cols=28 Identities=11% Similarity=0.100 Sum_probs=25.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 027623 191 KTEAGQRRAEKRHKFMEEFLMEFYEEWD 218 (221)
Q Consensus 191 ~T~~~r~~a~~r~~~~~~f~~~~~~E~~ 218 (221)
-|+.|+++.++-...+.+++.+|..|..
T Consensus 99 LT~~G~~~~~~~~~~~~~~~~~~~~~~~ 126 (127)
T 2frh_A 99 VNAQQRKKIESLLSRVNKRITEANNEIE 126 (127)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ECHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 4999999999999999999999988753
No 72
>3dev_A SH1221; alpha-beta protein., structural genomics, PSI-2, protein STR initiative, northeast structural genomics consortium, NESG; 3.10A {Staphylococcus haemolyticus}
Probab=30.09 E-value=1.1e+02 Score=25.34 Aligned_cols=42 Identities=10% Similarity=0.252 Sum_probs=30.0
Q ss_pred cHHHHHHHHHhhhccCCCCCCCchHH-HHHHHHHhhCCCCHHHH
Q 027623 50 SMEIVELAALLHDIGDYKYLRDPSEE-KIVENFLEDEGLEESKK 92 (221)
Q Consensus 50 d~~~l~lAalLHDIg~~~~~~~~~~~-~~a~~~L~~~g~~~~~~ 92 (221)
+...+.+++++.|+|..++....+.. +.|..++ +.|.+...+
T Consensus 146 ~~A~~L~~GI~tDTg~F~~~~tt~~t~~aaa~L~-~~Gad~~~i 188 (320)
T 3dev_A 146 HVARVLYLGIVGDTGRFLFSNTSPHTMEVASQLL-AYPFNHNAE 188 (320)
T ss_dssp HHHHHHHHHHHHHTTTTTSTTCCHHHHHHHHHHH-HSSSCHHHH
T ss_pred HHHHHHHHHHHHHccCcCCCCCCHHHHHHHHHHH-HcCCCHHHH
Confidence 45667889999999999876555554 5555544 578887755
No 73
>1tbx_A ORF F-93, hypothetical 11.0 kDa protein; sulfolobus spindle virus, winged helix, fusellovirus; 2.70A {Sulfolobus virus 1} SCOP: a.4.5.48
Probab=27.91 E-value=78 Score=20.57 Aligned_cols=28 Identities=18% Similarity=0.033 Sum_probs=24.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 027623 191 KTEAGQRRAEKRHKFMEEFLMEFYEEWD 218 (221)
Q Consensus 191 ~T~~~r~~a~~r~~~~~~f~~~~~~E~~ 218 (221)
-|+.|+++.++-.+.+.++...+...+.
T Consensus 69 LT~~G~~~~~~~~~~~~~~~~~~~~~~~ 96 (99)
T 1tbx_A 69 LTEKGKLFAISLKTAIETYKQIKKRHHH 96 (99)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ECHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 4999999999999999999888887764
No 74
>1k20_A Manganese-dependent inorganic pyrophosphatase; family II ppase, binuclear metal centre, hydrolas; 1.50A {Streptococcus gordonii} SCOP: c.107.1.1 PDB: 1wpp_A 2enx_A* 1i74_A
Probab=27.61 E-value=74 Score=26.04 Aligned_cols=43 Identities=16% Similarity=0.133 Sum_probs=30.9
Q ss_pred cHHHHHHHHHhhhccCCCCCCCchHH-HHHHHHHhhCCCCHHHH
Q 027623 50 SMEIVELAALLHDIGDYKYLRDPSEE-KIVENFLEDEGLEESKK 92 (221)
Q Consensus 50 d~~~l~lAalLHDIg~~~~~~~~~~~-~~a~~~L~~~g~~~~~~ 92 (221)
+...+.++|++.|+|..++....+.. ..|..+++..|.+...+
T Consensus 138 ~~A~~L~~gI~~DT~~F~~~~tt~~d~~aa~~L~~~~G~d~~~i 181 (310)
T 1k20_A 138 EIAGLMLSGLISDTLLLKSPTTHPTDKAIAPELAELAGVNLEEY 181 (310)
T ss_dssp HHHHHHHHHHHHHHTTTTSTTCCHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHcCCCHHHH
Confidence 46678889999999999875544444 56666665678876543
No 75
>3h38_A TRNA nucleotidyl transferase-related protein; transferase/RNA, nucleotide-binding, RNA-binding; 2.37A {Thermotoga maritima} PDB: 3h37_A 3h39_A* 3h3a_A*
Probab=26.20 E-value=61 Score=28.30 Aligned_cols=43 Identities=14% Similarity=0.036 Sum_probs=34.2
Q ss_pred cHHHHHHHHHhhhccCCCCCCCchHHHHHHHHHhhCCCCHHHHHHHHHHHHHh
Q 027623 50 SMEIVELAALLHDIGDYKYLRDPSEEKIVENFLEDEGLEESKKMRILNIIKKM 102 (221)
Q Consensus 50 d~~~l~lAalLHDIg~~~~~~~~~~~~~a~~~L~~~g~~~~~~~~V~~~I~~h 102 (221)
..-++.+++|+|+++. ..+..+++++.+|...++.|..++..+
T Consensus 278 ~~~~~~l~~L~~~~~~----------~~~~~~~~rl~ls~~~~~~l~~l~~~~ 320 (441)
T 3h38_A 278 DRFYAVLHVFLEFYDD----------ESWKEVRDRYSLRRNLINEIRHVEKSA 320 (441)
T ss_dssp CHHHHHHHHHTTTCCH----------HHHHHHHHHTTCCTTHHHHHHHHHHHH
T ss_pred hhHHHHHHHHhCCCCH----------HHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 3456788899998764 467889999999999999998877644
No 76
>2haw_A Manganese-dependent inorganic pyrophosphatase; substrate complex, hydrolase; HET: 1PE PG4; 1.75A {Bacillus subtilis} SCOP: c.107.1.1 PDB: 1k23_A* 1wpm_A* 2iw4_A*
Probab=26.06 E-value=82 Score=25.69 Aligned_cols=43 Identities=14% Similarity=0.181 Sum_probs=30.9
Q ss_pred cHHHHHHHHHhhhccCCCCCCCchHH-HHHHHHHhhCCCCHHHH
Q 027623 50 SMEIVELAALLHDIGDYKYLRDPSEE-KIVENFLEDEGLEESKK 92 (221)
Q Consensus 50 d~~~l~lAalLHDIg~~~~~~~~~~~-~~a~~~L~~~g~~~~~~ 92 (221)
+...+.++|++.|+|..++....+.. ..|..+++..|.+...+
T Consensus 137 ~~A~~L~~gI~~DT~~F~~~~tt~~d~~aa~~L~~~~G~d~~~i 180 (309)
T 2haw_A 137 EIAGLMLSAIISDSLLFKSPTCTDQDVAAAKELAEIAGVDAEEY 180 (309)
T ss_dssp HHHHHHHHHHHHHHTTTTSTTCCHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHcCCCHHHH
Confidence 46678889999999999875544444 55555554688887654
No 77
>2k89_A PLA2P, PLAP, phospholipase A-2-activating protein; ubiquitin binding, WD repeat, protein binding; NMR {Homo sapiens} PDB: 2k8a_A 2k8b_B 2k8c_B
Probab=23.48 E-value=57 Score=21.45 Aligned_cols=28 Identities=18% Similarity=0.140 Sum_probs=25.1
Q ss_pred HHHHHHHhhCCCCHHHHHHHHHHHHHhc
Q 027623 76 KIVENFLEDEGLEESKKMRILNIIKKMG 103 (221)
Q Consensus 76 ~~a~~~L~~~g~~~~~~~~V~~~I~~h~ 103 (221)
..|.+|+.+.++|..-++.|...|....
T Consensus 43 ~aAqkFi~~n~Lp~~yldqI~~FI~~N~ 70 (80)
T 2k89_A 43 LTAYNFLQKNDLNPMFLDQVAKFIIDNT 70 (80)
T ss_dssp HHHHHHHHHHTCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhC
Confidence 8999999999999999999998887664
No 78
>2h5n_A Hypothetical protein PG_1108; SAD, MCSG,PSI, structural genomics, PR structure initiative; 2.01A {Porphyromonas gingivalis} SCOP: a.287.1.2
Probab=20.47 E-value=2.3e+02 Score=19.89 Aligned_cols=51 Identities=10% Similarity=0.077 Sum_probs=35.2
Q ss_pred CcHHHHHHHHHhhhccCCCCCCCchHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 027623 49 DSMEIVELAALLHDIGDYKYLRDPSEEKIVENFLEDEGLEESKKMRILNII 99 (221)
Q Consensus 49 ~d~~~l~lAalLHDIg~~~~~~~~~~~~~a~~~L~~~g~~~~~~~~V~~~I 99 (221)
.+++++.+++++=-+.+....-++.+......++.++|+++.....+....
T Consensus 14 ~~~~l~a~~aLl~~VA~ADG~v~~~E~~~l~~~l~~lgl~~~e~~~l~~~~ 64 (133)
T 2h5n_A 14 SGQELTAIIKMAKSMVMADGKIKPAEIAVMTREFMRFGILQDQVDLLLKAS 64 (133)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHGGGTCCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHH
Confidence 456777777777666665433444455788888888999998777666654
Done!