BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>027626
MLKGLLNSQQSESDAYSLSWAQFPCHPGPVNDIVSLSSSIALILCKITSSLHKPSETPNS
WKADQNMSVESLALSPQFTVKRCSIGEVGTKNPIWVHPNSLNFQRGPSRTKHLSIKSSSR
DGVGDKDGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSC
VQQGANRVIVSPFFLFPGRHWCQVVLSNFLDNISLNFYRHN

High Scoring Gene Products

Symbol, full name Information P value
SIRB
AT1G50170
protein from Arabidopsis thaliana 8.3e-35
cbiX
Sirohydrochlorin cobaltochelatase
protein from Geobacter sulfurreducens PCA 8.2e-12
GSU_3000
cbiX protein
protein from Geobacter sulfurreducens PCA 8.2e-12
CHY_0766
CbiX protein
protein from Carboxydothermus hydrogenoformans Z-2901 1.1e-05
CHY_0766
cbiX protein
protein from Carboxydothermus hydrogenoformans Z-2901 1.1e-05
BAS1994
CbiX domain protein
protein from Bacillus anthracis 1.4e-05
BA_2143
cbiX domain protein
protein from Bacillus anthracis str. Ames 1.4e-05
BAS1336
CbiX domain protein
protein from Bacillus anthracis 0.00022
BA_1446
cbiX domain protein
protein from Bacillus anthracis str. Ames 0.00022

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  027626
        (221 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2011987 - symbol:SIRB "sirohydrochlorin ferroc...   377  8.3e-35   1
UNIPROTKB|Q748K1 - symbol:cbiX "Sirohydrochlorin cobaltoc...   160  8.2e-12   1
TIGR_CMR|GSU_3000 - symbol:GSU_3000 "cbiX protein" specie...   160  8.2e-12   1
UNIPROTKB|Q3AE14 - symbol:CHY_0766 "CbiX protein" species...   105  1.1e-05   1
TIGR_CMR|CHY_0766 - symbol:CHY_0766 "cbiX protein" specie...   105  1.1e-05   1
UNIPROTKB|Q81RA7 - symbol:BAS1994 "CbiX domain protein" s...   120  1.4e-05   1
TIGR_CMR|BA_2143 - symbol:BA_2143 "cbiX domain protein" s...   120  1.4e-05   1
UNIPROTKB|Q81T43 - symbol:BAS1336 "CbiX domain protein" s...   111  0.00022   1
TIGR_CMR|BA_1446 - symbol:BA_1446 "cbiX domain protein" s...   111  0.00022   1


>TAIR|locus:2011987 [details] [associations]
            symbol:SIRB "sirohydrochlorin ferrochelatase B"
            species:3702 "Arabidopsis thaliana" [GO:0009236 "cobalamin
            biosynthetic process" evidence=IEA] [GO:0016829 "lyase activity"
            evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=IDA] [GO:0019354 "siroheme
            biosynthetic process" evidence=IDA] [GO:0051266 "sirohydrochlorin
            ferrochelatase activity" evidence=IDA] [GO:0006979 "response to
            oxidative stress" evidence=IMP] InterPro:IPR002762 Pfam:PF01903
            EMBL:CP002684 GO:GO:0009507 GO:GO:0006979 GO:GO:0046872
            GO:GO:0009236 GO:GO:0051266 GO:GO:0019354 eggNOG:COG2138
            EMBL:BT004060 EMBL:BT005145 IPI:IPI00527631 RefSeq:NP_564562.1
            UniGene:At.38080 ProteinModelPortal:Q84JH7 SMR:Q84JH7 IntAct:Q84JH7
            STRING:Q84JH7 PaxDb:Q84JH7 PRIDE:Q84JH7 EnsemblPlants:AT1G50170.1
            GeneID:841439 KEGG:ath:AT1G50170 TAIR:At1g50170
            HOGENOM:HOG000147058 InParanoid:Q84JH7 OMA:PIVEPAH PhylomeDB:Q84JH7
            ProtClustDB:PLN02757 ArrayExpress:Q84JH7 Genevestigator:Q84JH7
            Uniprot:Q84JH7
        Length = 225

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 74/112 (66%), Positives = 83/112 (74%)

Query:    93 PIWVHPNSLNFQRGPSRTKHLSIKSSS---RDGVGDKDGVIIVDHGSRRRESNLMLKQFV 149
             P+         QRG  R        S    ++G+GD DG+IIVDHGSRRRESNLML++FV
Sbjct:    45 PVSFKVEKFQLQRGRRRRGSPCFGESEGLVKNGIGDADGIIIVDHGSRRRESNLMLEEFV 104

Query:   150 AMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANRVIVSPFFLFPGRHW 201
              MF+EKTGY IVEPAHMELAEPSIKDAF  CVQQGA RV+VSPFFLFPGRHW
Sbjct:   105 KMFKEKTGYPIVEPAHMELAEPSIKDAFSLCVQQGAKRVVVSPFFLFPGRHW 156


>UNIPROTKB|Q748K1 [details] [associations]
            symbol:cbiX "Sirohydrochlorin cobaltochelatase"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR002762 Pfam:PF01903 GO:GO:0046872
            EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0016829 GO:GO:0009236
            HOGENOM:HOG000223316 RefSeq:NP_954042.1 ProteinModelPortal:Q748K1
            GeneID:2685816 KEGG:gsu:GSU3000 PATRIC:22028859 OMA:VEVSFRE
            ProtClustDB:CLSK829049 BioCyc:GSUL243231:GH27-2976-MONOMER
            Uniprot:Q748K1
        Length = 127

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 31/75 (41%), Positives = 47/75 (62%)

Query:   126 KDGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGA 185
             K  ++++ HGSR  E+N  +++  AM +E TG+ IVE +  E   P I+    +CV QGA
Sbjct:     2 KTAILLMAHGSRIPEANDAVREIAAMVKEMTGFEIVEVSFREQHLPDIQQGIDACVAQGA 61

Query:   186 NRVIVSPFFLFPGRH 200
              RV++ P+FLF G H
Sbjct:    62 ERVLLMPYFLFVGAH 76


>TIGR_CMR|GSU_3000 [details] [associations]
            symbol:GSU_3000 "cbiX protein" species:243231 "Geobacter
            sulfurreducens PCA" [GO:0003674 "molecular_function" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR002762
            Pfam:PF01903 GO:GO:0046872 EMBL:AE017180 GenomeReviews:AE017180_GR
            GO:GO:0016829 GO:GO:0009236 HOGENOM:HOG000223316 RefSeq:NP_954042.1
            ProteinModelPortal:Q748K1 GeneID:2685816 KEGG:gsu:GSU3000
            PATRIC:22028859 OMA:VEVSFRE ProtClustDB:CLSK829049
            BioCyc:GSUL243231:GH27-2976-MONOMER Uniprot:Q748K1
        Length = 127

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 31/75 (41%), Positives = 47/75 (62%)

Query:   126 KDGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGA 185
             K  ++++ HGSR  E+N  +++  AM +E TG+ IVE +  E   P I+    +CV QGA
Sbjct:     2 KTAILLMAHGSRIPEANDAVREIAAMVKEMTGFEIVEVSFREQHLPDIQQGIDACVAQGA 61

Query:   186 NRVIVSPFFLFPGRH 200
              RV++ P+FLF G H
Sbjct:    62 ERVLLMPYFLFVGAH 76


>UNIPROTKB|Q3AE14 [details] [associations]
            symbol:CHY_0766 "CbiX protein" species:246194
            "Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR002762 Pfam:PF01903 GO:GO:0046872
            EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0016829 GO:GO:0009236
            eggNOG:COG2138 RefSeq:YP_359620.1 STRING:Q3AE14 GeneID:3727049
            KEGG:chy:CHY_0766 PATRIC:21274666 HOGENOM:HOG000223316 OMA:RSETAND
            BioCyc:CHYD246194:GJCN-766-MONOMER Uniprot:Q3AE14
        Length = 120

 Score = 105 (42.0 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 24/72 (33%), Positives = 39/72 (54%)

Query:   129 VIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANRV 188
             V+++ HGSR  ++    ++ V   RE+  + + E A M  A P++K+A     Q+G   +
Sbjct:     5 VVLLAHGSRVAQAVEKFREVVGKLRERFPFRL-EEAFMVRANPNLKEALLRLYQEGYQEI 63

Query:   189 IVSPFFLFPGRH 200
              V P FLF G H
Sbjct:    64 AVFPVFLFEGLH 75


>TIGR_CMR|CHY_0766 [details] [associations]
            symbol:CHY_0766 "cbiX protein" species:246194
            "Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR002762 Pfam:PF01903 GO:GO:0046872
            EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0016829 GO:GO:0009236
            eggNOG:COG2138 RefSeq:YP_359620.1 STRING:Q3AE14 GeneID:3727049
            KEGG:chy:CHY_0766 PATRIC:21274666 HOGENOM:HOG000223316 OMA:RSETAND
            BioCyc:CHYD246194:GJCN-766-MONOMER Uniprot:Q3AE14
        Length = 120

 Score = 105 (42.0 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 24/72 (33%), Positives = 39/72 (54%)

Query:   129 VIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANRV 188
             V+++ HGSR  ++    ++ V   RE+  + + E A M  A P++K+A     Q+G   +
Sbjct:     5 VVLLAHGSRVAQAVEKFREVVGKLRERFPFRL-EEAFMVRANPNLKEALLRLYQEGYQEI 63

Query:   189 IVSPFFLFPGRH 200
              V P FLF G H
Sbjct:    64 AVFPVFLFEGLH 75


>UNIPROTKB|Q81RA7 [details] [associations]
            symbol:BAS1994 "CbiX domain protein" species:1392 "Bacillus
            anthracis" [GO:0003674 "molecular_function" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR002762
            Pfam:PF01903 GO:GO:0046872 EMBL:AE016879 EMBL:AE017334
            EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0016829 GO:GO:0009236
            HOGENOM:HOG000249419 RefSeq:NP_844541.1 RefSeq:YP_018786.1
            RefSeq:YP_028257.1 ProteinModelPortal:Q81RA7 DNASU:1085779
            EnsemblBacteria:EBBACT00000010752 EnsemblBacteria:EBBACT00000018660
            EnsemblBacteria:EBBACT00000023879 GeneID:1085779 GeneID:2819817
            GeneID:2848348 KEGG:ban:BA_2143 KEGG:bar:GBAA_2143 KEGG:bat:BAS1994
            OMA:SCSFLTK ProtClustDB:CLSK916516
            BioCyc:BANT260799:GJAJ-2062-MONOMER
            BioCyc:BANT261594:GJ7F-2140-MONOMER Uniprot:Q81RA7
        Length = 236

 Score = 120 (47.3 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 24/74 (32%), Positives = 39/74 (52%)

Query:   128 GVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANR 187
             G++ V HGSR +ESN     F+    ++    I + A +EL  P+I DA    + +GA  
Sbjct:     3 GIVYVGHGSRLQESNEQFIHFIQSVMKERNERIQKIAFLELTTPTISDAVTETILEGATE 62

Query:   188 VIVSPFFLFPGRHW 201
             +++ P  LF   H+
Sbjct:    63 IMIVPVLLFAAAHY 76


>TIGR_CMR|BA_2143 [details] [associations]
            symbol:BA_2143 "cbiX domain protein" species:198094
            "Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR002762 Pfam:PF01903 GO:GO:0046872 EMBL:AE016879
            EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0016829
            GO:GO:0009236 HOGENOM:HOG000249419 RefSeq:NP_844541.1
            RefSeq:YP_018786.1 RefSeq:YP_028257.1 ProteinModelPortal:Q81RA7
            DNASU:1085779 EnsemblBacteria:EBBACT00000010752
            EnsemblBacteria:EBBACT00000018660 EnsemblBacteria:EBBACT00000023879
            GeneID:1085779 GeneID:2819817 GeneID:2848348 KEGG:ban:BA_2143
            KEGG:bar:GBAA_2143 KEGG:bat:BAS1994 OMA:SCSFLTK
            ProtClustDB:CLSK916516 BioCyc:BANT260799:GJAJ-2062-MONOMER
            BioCyc:BANT261594:GJ7F-2140-MONOMER Uniprot:Q81RA7
        Length = 236

 Score = 120 (47.3 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 24/74 (32%), Positives = 39/74 (52%)

Query:   128 GVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANR 187
             G++ V HGSR +ESN     F+    ++    I + A +EL  P+I DA    + +GA  
Sbjct:     3 GIVYVGHGSRLQESNEQFIHFIQSVMKERNERIQKIAFLELTTPTISDAVTETILEGATE 62

Query:   188 VIVSPFFLFPGRHW 201
             +++ P  LF   H+
Sbjct:    63 IMIVPVLLFAAAHY 76


>UNIPROTKB|Q81T43 [details] [associations]
            symbol:BAS1336 "CbiX domain protein" species:1392 "Bacillus
            anthracis" [GO:0003674 "molecular_function" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR002762
            Pfam:PF01903 GO:GO:0046872 EMBL:AE016879 EMBL:AE017334
            EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0016829 GO:GO:0009236
            HOGENOM:HOG000249419 RefSeq:NP_843902.1 RefSeq:YP_018070.1
            RefSeq:YP_027605.1 DNASU:1085680 EnsemblBacteria:EBBACT00000009876
            EnsemblBacteria:EBBACT00000013716 EnsemblBacteria:EBBACT00000023261
            GeneID:1085680 GeneID:2819614 GeneID:2849632 KEGG:ban:BA_1446
            KEGG:bar:GBAA_1446 KEGG:bat:BAS1336 OMA:CMNRVEA
            ProtClustDB:CLSK916240 BioCyc:BANT260799:GJAJ-1410-MONOMER
            BioCyc:BANT261594:GJ7F-1474-MONOMER Uniprot:Q81T43
        Length = 251

 Score = 111 (44.1 bits), Expect = 0.00022, P = 0.00022
 Identities = 23/72 (31%), Positives = 37/72 (51%)

Query:   129 VIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANRV 188
             ++ + HGSR + +      F+     +    I E   +ELA P+I + F +CV++GA  +
Sbjct:     4 ILYICHGSRLKAAKEEAVAFITSCMNRVEVSIQEICFLELASPTIDEGFRTCVKRGATEI 63

Query:   189 IVSPFFLFPGRH 200
             IV P FL    H
Sbjct:    64 IVIPVFLLAAGH 75


>TIGR_CMR|BA_1446 [details] [associations]
            symbol:BA_1446 "cbiX domain protein" species:198094
            "Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR002762 Pfam:PF01903 GO:GO:0046872 EMBL:AE016879
            EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0016829
            GO:GO:0009236 HOGENOM:HOG000249419 RefSeq:NP_843902.1
            RefSeq:YP_018070.1 RefSeq:YP_027605.1 DNASU:1085680
            EnsemblBacteria:EBBACT00000009876 EnsemblBacteria:EBBACT00000013716
            EnsemblBacteria:EBBACT00000023261 GeneID:1085680 GeneID:2819614
            GeneID:2849632 KEGG:ban:BA_1446 KEGG:bar:GBAA_1446 KEGG:bat:BAS1336
            OMA:CMNRVEA ProtClustDB:CLSK916240
            BioCyc:BANT260799:GJAJ-1410-MONOMER
            BioCyc:BANT261594:GJ7F-1474-MONOMER Uniprot:Q81T43
        Length = 251

 Score = 111 (44.1 bits), Expect = 0.00022, P = 0.00022
 Identities = 23/72 (31%), Positives = 37/72 (51%)

Query:   129 VIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANRV 188
             ++ + HGSR + +      F+     +    I E   +ELA P+I + F +CV++GA  +
Sbjct:     4 ILYICHGSRLKAAKEEAVAFITSCMNRVEVSIQEICFLELASPTIDEGFRTCVKRGATEI 63

Query:   189 IVSPFFLFPGRH 200
             IV P FL    H
Sbjct:    64 IVIPVFLLAAGH 75


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.133   0.411    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      221       209   0.00079  112 3  11 22  0.36    33
                                                     31  0.48    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  613 (65 KB)
  Total size of DFA:  191 KB (2109 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.40u 0.10s 17.50t   Elapsed:  00:00:01
  Total cpu time:  17.40u 0.10s 17.50t   Elapsed:  00:00:01
  Start:  Sat May 11 01:49:32 2013   End:  Sat May 11 01:49:33 2013

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