BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027626
(221 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q58380|CBIX_METJA Sirohydrochlorin cobaltochelatase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=cbiX PE=3 SV=1
Length = 143
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%)
Query: 127 DGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGAN 186
+ +++V HGSR S +L + +E+ + IVE ME +EP+I A ++QGA
Sbjct: 2 EALVLVGHGSRLPYSKELLVKLAEKVKERNLFPIVEIGLMEFSEPTIPQAVKKAIEQGAK 61
Query: 187 RVIVSPFFLFPGRHWCQ 203
R+IV P FL G H +
Sbjct: 62 RIIVVPVFLAHGIHTTR 78
>sp|O87690|CBIX_BACME Sirohydrochlorin cobaltochelatase OS=Bacillus megaterium GN=cbiX
PE=1 SV=1
Length = 306
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 93 PIWVHPNSLNFQRGPSRTKHLSIKSSSRDGVGDKDGVIIVDHGSRRRESNLMLKQFVAMF 152
PI VH +L + + ++++ + D VI++ G ++N L + +
Sbjct: 105 PIGVHEEALEILKTRLQESGENLETPAED-----TAVIVLGRGGSDPDANSDLYKITRLL 159
Query: 153 REKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANRVIVSPFFLFPG 198
EKT Y IVE + M + P I + C++ GA +V++ P+FLF G
Sbjct: 160 WEKTNYKIVETSFMGVTAPLIDEGVERCLKLGAKKVVILPYFLFTG 205
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 129 VIIVDHGSRRRESNLMLKQFVAMFREK-TGYLIVEPAHMELAEPSIKDAFGSCVQQGANR 187
V+ V HGSR E N ++F++ + ++VE +E P++ +CV +GA
Sbjct: 9 VLFVGHGSRDPEGND--REFISTMKHDWDASILVETCFLEFERPNVSQGIDTCVAKGAQD 66
Query: 188 VIVSPFFLFPGRH 200
V+V P L P H
Sbjct: 67 VVVIPIMLLPAGH 79
>sp|P61819|CBIX_METMP Sirohydrochlorin cobaltochelatase OS=Methanococcus maripaludis
(strain S2 / LL) GN=cbiX PE=3 SV=1
Length = 144
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 127 DGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGAN 186
+ +++V HGSR S ++ + + + Y IVE ME EP+I + GA
Sbjct: 2 EALVLVGHGSRLPHSKNVVMEVAEKIKARNIYDIVEVGMMEFNEPTIPQTIKKVIDAGAK 61
Query: 187 RVIVSPFFLFPGRH 200
+VIV+P FL PG H
Sbjct: 62 KVIVTPVFLAPGNH 75
>sp|P61817|SIRB_BACME Sirohydrochlorin ferrochelatase OS=Bacillus megaterium GN=sirB PE=3
SV=1
Length = 266
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%)
Query: 127 DGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGAN 186
D V+ V HGSR +E F+ ++ I E +ELA P+I+ F +C++QGA
Sbjct: 13 DAVLYVCHGSRVKEGADQAVAFIERCKKNLDVPIQEVCFLELASPTIEQGFEACIEQGAT 72
Query: 187 RVIVSPFFLFPGRH 200
R+ + P L H
Sbjct: 73 RIAIVPLLLLTAAH 86
>sp|A6UWT5|CBIX_META3 Sirohydrochlorin cobaltochelatase OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=cbiX PE=3 SV=1
Length = 143
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 127 DGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGAN 186
+ ++++ HGSR S ++ + +EK Y IVE ME EP+I + +GA
Sbjct: 2 EALVLLGHGSRLPYSKEIVGKVAEKIKEKNIYDIVEIGMMEFNEPTIPQTINKVIAEGAK 61
Query: 187 RVIVSPFFLFPGRH 200
++I+ P FL G H
Sbjct: 62 KIIIVPVFLAHGNH 75
>sp|Q8TY77|CBIX_METKA Sirohydrochlorin cobaltochelatase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=cbiX PE=3
SV=1
Length = 143
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 128 GVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANR 187
V++V HGSR S ++++ E + VE MEL EP++++A + G ++
Sbjct: 3 AVVLVGHGSRLPYSRQVVEKIAEYVEEMGDFETVEVGFMELCEPTVQEAVKKAAESGVDK 62
Query: 188 VIVSPFFLFPGRH 200
++V P FL G H
Sbjct: 63 IVVVPVFLAHGVH 75
>sp|O34632|SIRB_BACSU Sirohydrochlorin ferrochelatase OS=Bacillus subtilis (strain 168)
GN=sirB PE=2 SV=1
Length = 261
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%)
Query: 126 KDGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGA 185
K ++ V HGSR +++ F+ + + E + +EL EP+I+ F +CV+QGA
Sbjct: 2 KQAILYVGHGSRVKKAQQEAAAFLEGCKAHISVPVQEISFLELQEPTIETGFEACVKQGA 61
Query: 186 NRVIVSPFFLFPGRH 200
+ V P L H
Sbjct: 62 THIAVVPLLLLTAAH 76
>sp|Q55451|CBIX_SYNY3 Sirohydrochlorin cobaltochelatase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=cbiX PE=1 SV=1
Length = 336
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%)
Query: 129 VIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANRV 188
++++ HG+R + FVA ++ V P +EL EP+I+ CV QG +
Sbjct: 27 LLMIGHGTRDEDGRQTFLDFVAQYQALDHSRPVIPCFLELTEPNIQAGVQQCVDQGFEEI 86
Query: 189 IVSPFFLFPGRH 200
P LF RH
Sbjct: 87 SALPILLFAARH 98
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 108 SRTKHLSIKSSSRDGVGDKDGVII-VDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHM 166
+R L ++ G+ +D V++ V GS ++N + + M E +GY VE +
Sbjct: 137 ARLNQLDSPEANPQGIDRQDTVLLFVGRGSSDPDANGDVYKMARMLWEGSGYQTVETCFI 196
Query: 167 ELAEPSIKDAFGSCVQQGANRVIVSPFFLFPG 198
++ P +++ F R+IV P+FLF G
Sbjct: 197 GISHPRLEEGFRRARLYQPKRIIVLPYFLFMG 228
>sp|O27448|CBIX_METTH Sirohydrochlorin cobaltochelatase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=cbiX PE=1 SV=2
Length = 143
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 126 KDGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGA 185
K GV++V HGSR ++ ++R++ + V M ++ PSI +A G
Sbjct: 10 KIGVLLVGHGSRLPYGEEVINGIADIYRQEADHP-VAVGFMNMSRPSIPEAINELAAMGV 68
Query: 186 NRVIVSPFFLFPGRH 200
++IV+P FL G H
Sbjct: 69 EKIIVTPVFLAHGVH 83
>sp|Q4JAI2|CBIX_SULAC Sirohydrochlorin cobaltochelatase OS=Sulfolobus acidocaldarius
(strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 /
NCIMB 11770) GN=cbiX PE=3 SV=1
Length = 123
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 128 GVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANR 187
G+++V HGS+ +E ++ + K + +VE +E+ EP I +A V++GA+
Sbjct: 3 GLLLVLHGSKIKEWQEIVINYAEEL--KRHFPLVEYGFIEINEPKIDEAAKKLVERGADT 60
Query: 188 VIVSPFFLFPGRHW 201
++V P G H+
Sbjct: 61 IVVVPLLFAAGMHF 74
>sp|Q975N6|CBIX_SULTO Sirohydrochlorin cobaltochelatase OS=Sulfolobus tokodaii (strain
DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=cbiX PE=3
SV=1
Length = 120
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 128 GVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANR 187
GV++V HGS+ +E + Q+ + R+ + +VE +E +PSI +A G +
Sbjct: 3 GVLLVLHGSKIKEWQDVAIQYANLLRKY--FDLVEYGFIEFNQPSITEAAKKLASNGVDT 60
Query: 188 VIVSPFFLFPGRHW 201
+IV P G H+
Sbjct: 61 IIVVPLLFAAGTHF 74
>sp|Q8TJZ5|CBIX_METAC Sirohydrochlorin cobaltochelatase OS=Methanosarcina acetivorans
(strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=cbiX
PE=3 SV=1
Length = 130
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 38/79 (48%)
Query: 125 DKDGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
+K G++ + HGS+ + ++ Q +K ++V ME +EP++++A G
Sbjct: 3 EKLGILAIGHGSKLPYNKEVVSQIADYIAQKHSDVVVRAGFMENSEPTLEEAIAGFAGTG 62
Query: 185 ANRVIVSPFFLFPGRHWCQ 203
++ P FL G H +
Sbjct: 63 VTKIAAVPVFLASGVHITK 81
>sp|Q12X56|CBIX_METBU Sirohydrochlorin cobaltochelatase OS=Methanococcoides burtonii
(strain DSM 6242) GN=cbiX PE=3 SV=1
Length = 131
Score = 38.9 bits (89), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%)
Query: 125 DKDGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
+K G++ + HGSR + ++ + A +K +++ ME P++ +A G
Sbjct: 3 EKIGILAIGHGSRLPYNKEVVSEIAATIAKKHPDYVIKAGFMENTLPTVMEALADFDGTG 62
Query: 185 ANRVIVSPFFLFPGRHWCQ 203
++I P FL G H +
Sbjct: 63 VTKIIAVPVFLASGVHITE 81
>sp|C3N773|CBIX_SULIY Sirohydrochlorin cobaltochelatase OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=cbiX PE=3 SV=1
Length = 128
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 128 GVIIVDHGSRR---RESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
GV++V HGS+ ++ + ++++ + + +VE +E +P++ +A + + +G
Sbjct: 3 GVLLVLHGSKIPEWKDVGIKYAEYLSRY-----FNLVEFGFLEFNKPTLSEALSNLLAKG 57
Query: 185 ANRVIVSPFFLFPGRHW 201
AN+++V P G H+
Sbjct: 58 ANKIVVVPLLFATGTHF 74
>sp|C3NGG2|CBIX_SULIN Sirohydrochlorin cobaltochelatase OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=cbiX PE=3 SV=1
Length = 128
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 128 GVIIVDHGSRR---RESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
GV++V HGS+ ++ + ++++ + + +VE +E +P++ +A + + +G
Sbjct: 3 GVLLVLHGSKIPEWKDVGIKYAEYLSRY-----FNLVEFGFLEFNKPTLSEALSNLLAKG 57
Query: 185 ANRVIVSPFFLFPGRHW 201
AN+++V P G H+
Sbjct: 58 ANKIVVVPLLFATGTHF 74
>sp|C3MWZ3|CBIX_SULIM Sirohydrochlorin cobaltochelatase OS=Sulfolobus islandicus (strain
M.14.25 / Kamchatka #1) GN=cbiX PE=3 SV=1
Length = 128
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 128 GVIIVDHGSRR---RESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
GV++V HGS+ ++ + ++++ + + +VE +E +P++ +A + + +G
Sbjct: 3 GVLLVLHGSKIPEWKDVGIKYAEYLSRY-----FNLVEFGFLEFNKPTLSEALSNLLAKG 57
Query: 185 ANRVIVSPFFLFPGRHW 201
AN+++V P G H+
Sbjct: 58 ANKIVVVPLLFATGTHF 74
>sp|C3MR05|CBIX_SULIL Sirohydrochlorin cobaltochelatase OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=cbiX PE=3 SV=1
Length = 128
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 128 GVIIVDHGSRR---RESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
GV++V HGS+ ++ + ++++ + + +VE +E +P++ +A + + +G
Sbjct: 3 GVLLVLHGSKIPEWKDVGIKYAEYLSRY-----FNLVEFGFLEFNKPTLSEALSNLLAKG 57
Query: 185 ANRVIVSPFFLFPGRHW 201
AN+++V P G H+
Sbjct: 58 ANKIVVVPLLFATGTHF 74
>sp|C4KID1|CBIX_SULIK Sirohydrochlorin cobaltochelatase OS=Sulfolobus islandicus (strain
M.16.4 / Kamchatka #3) GN=cbiX PE=3 SV=1
Length = 128
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 128 GVIIVDHGSRR---RESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
GV++V HGS+ ++ + ++++ + + +VE +E +P++ +A + + +G
Sbjct: 3 GVLLVLHGSKIPEWKDVGIKYAEYLSRY-----FNLVEFGFLEFNKPTLSEALSNLLAKG 57
Query: 185 ANRVIVSPFFLFPGRHW 201
AN+++V P G H+
Sbjct: 58 ANKIVVVPLLFATGTHF 74
>sp|C3MZ53|CBIX_SULIA Sirohydrochlorin cobaltochelatase OS=Sulfolobus islandicus (strain
M.16.27) GN=cbiX PE=3 SV=1
Length = 128
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 128 GVIIVDHGSRR---RESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
GV++V HGS+ ++ + ++++ + + +VE +E +P++ +A + + +G
Sbjct: 3 GVLLVLHGSKIPEWKDVGIKYAEYLSRY-----FNLVEFGFLEFNKPTLSEALSNLLAKG 57
Query: 185 ANRVIVSPFFLFPGRHW 201
AN+++V P G H+
Sbjct: 58 ANKIVVVPLLFATGTHF 74
>sp|Q8PZH6|CBIX_METMA Sirohydrochlorin cobaltochelatase OS=Methanosarcina mazei (strain
ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM
88) GN=cbiX PE=3 SV=1
Length = 130
Score = 37.7 bits (86), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 38/79 (48%)
Query: 125 DKDGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
+K G++ + HGS+ + ++ Q +K ++V ME +EP++++A G
Sbjct: 3 EKLGILAIGHGSKLPYNKEVVTQIANYIAQKHSDVVVRAGFMENSEPTLEEAIEGFSGTG 62
Query: 185 ANRVIVSPFFLFPGRHWCQ 203
++ P FL G H +
Sbjct: 63 VTKISAVPVFLASGVHITK 81
>sp|Q980A7|CBIX_SULSO Sirohydrochlorin cobaltochelatase OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=cbiX
PE=3 SV=1
Length = 128
Score = 37.4 bits (85), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 128 GVIIVDHGSRR---RESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
GV++V HGS+ ++ + ++++ + + +VE +E +P++ +A + + +G
Sbjct: 3 GVLLVLHGSKIPEWKDVGIKYAEYLSKY-----FSLVEFGFLEFNKPTLSEALSNLLAKG 57
Query: 185 ANRVIVSPFFLFPGRHW 201
A++++V P G H+
Sbjct: 58 ADKIVVVPLLFATGTHF 74
>sp|P61816|CBIX_METBF Sirohydrochlorin cobaltochelatase OS=Methanosarcina barkeri (strain
Fusaro / DSM 804) GN=cbiX PE=1 SV=1
Length = 130
Score = 37.0 bits (84), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 36/79 (45%)
Query: 125 DKDGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
+K G++ + HGS+ + ++ Q K ++V ME +EP++ +A G
Sbjct: 3 EKLGILAIGHGSKLPYNKEVVTQIADYIARKHSDVVVRAGFMENSEPTLGEAIEGFSGTG 62
Query: 185 ANRVIVSPFFLFPGRHWCQ 203
++ P FL G H +
Sbjct: 63 VTKIAAVPVFLASGVHITK 81
>sp|Q6MHT3|HEMH_BDEBA Ferrochelatase OS=Bdellovibrio bacteriovorus (strain ATCC 15356 /
DSM 50701 / NCIB 9529 / HD100) GN=hemH PE=3 SV=1
Length = 335
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 146 KQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANRVIVSPFF 194
++F A+ +E+ V ++ +EPS++ A Q G + ++V+P F
Sbjct: 79 RRFAALLQEELKDQFVVKVGLQYSEPSVESALKDLQQAGVDEILVAPMF 127
>sp|B3PLQ1|GLMM_CELJU Phosphoglucosamine mutase OS=Cellvibrio japonicus (strain Ueda107)
GN=glmM PE=3 SV=1
Length = 445
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 92 NPIWVHPNSLNFQRGPSRTKHLSIKSSSRD-----GV---GDKDGVIIVDHGSRRRESNL 143
PI+V PN N RG TK +++ + G+ GD D V+ VDH + +
Sbjct: 201 TPIFVDPNGTNINRGCGSTKPEALQEKVVELGADLGIAFDGDGDRVVFVDHKGELVDGDE 260
Query: 144 MLKQFVAMFREKTG 157
+L A +E G
Sbjct: 261 LLYIIAAYQQEYAG 274
>sp|Q0CU99|TOF1_ASPTN Topoisomerase 1-associated factor 1 OS=Aspergillus terreus (strain
NIH 2624 / FGSC A1156) GN=tof1 PE=3 SV=1
Length = 1147
Score = 32.0 bits (71), Expect = 3.0, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 146 KQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANRVI 189
KQ +++ R L+V P E E IK G+ V+ G NR++
Sbjct: 733 KQTISVTRRPPAELVVNPNDAETTEDKIKIVIGALVKDGKNRLV 776
>sp|B9K115|LLDD_AGRVS L-lactate dehydrogenase [cytochrome] OS=Agrobacterium vitis (strain
S4 / ATCC BAA-846) GN=lldD PE=3 SV=1
Length = 379
Score = 30.8 bits (68), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 12/127 (9%)
Query: 88 VGTKNPIWVHPNSLNFQRGPSRTKHLSIKSSSRDGVG-DKDGVIIVDHGSRRRESNLMLK 146
+G K+ W+ +F +GP K + ++D V DG+I+ +HG R+ + L
Sbjct: 232 IGWKDLEWIR----DFWKGPMIIKGILDPEDAKDAVRFGADGIIVSNHGGRQLDGVLS-- 285
Query: 147 QFVAMFREKTGYLIVEPAHMELAEPSIKDAFG--SCVQQGANRVIVSPFFLFPGRHWCQV 204
+ V+ LA+ I+ + QGA+ V++ F++ Q
Sbjct: 286 ---SARALPAIAAAVKGDLTILADSGIRSGLDVVRMIAQGADGVLIGRAFVYALAAAGQA 342
Query: 205 VLSNFLD 211
+ N LD
Sbjct: 343 GVENLLD 349
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,264,657
Number of Sequences: 539616
Number of extensions: 3132197
Number of successful extensions: 7139
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 7110
Number of HSP's gapped (non-prelim): 31
length of query: 221
length of database: 191,569,459
effective HSP length: 113
effective length of query: 108
effective length of database: 130,592,851
effective search space: 14104027908
effective search space used: 14104027908
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)