Query 027629
Match_columns 221
No_of_seqs 149 out of 1237
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 12:48:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027629.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027629hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02307 phosphoglucomutase 100.0 2.9E-45 6.3E-50 352.8 22.7 213 1-221 365-579 (579)
2 KOG0625 Phosphoglucomutase [Ca 100.0 2.2E-43 4.7E-48 321.6 17.4 208 1-221 348-558 (558)
3 cd03085 PGM1 Phosphoglucomutas 100.0 8.6E-43 1.9E-47 334.1 22.0 204 1-221 341-548 (548)
4 PTZ00150 phosphoglucomutase-2- 100.0 4.9E-34 1.1E-38 275.4 19.3 183 1-207 372-572 (584)
5 cd05801 PGM_like3 This bacteri 100.0 3.2E-30 7E-35 246.0 15.2 151 1-180 349-505 (522)
6 cd05800 PGM_like2 This PGM-lik 100.0 5.4E-30 1.2E-34 240.4 15.3 146 1-183 302-448 (461)
7 TIGR01132 pgm phosphoglucomuta 100.0 1.1E-29 2.4E-34 243.4 16.9 154 1-183 365-525 (543)
8 PRK07564 phosphoglucomutase; V 100.0 1.7E-29 3.6E-34 242.2 15.7 149 1-180 364-520 (543)
9 cd03089 PMM_PGM The phosphoman 100.0 4.7E-29 1E-33 233.1 13.0 138 1-184 292-431 (443)
10 cd05799 PGM2 This CD includes 100.0 1E-27 2.2E-32 226.6 17.7 137 1-182 330-472 (487)
11 cd05805 MPG1_transferase GTP-m 100.0 3.1E-28 6.7E-33 227.5 12.7 133 1-183 295-428 (441)
12 PRK09542 manB phosphomannomuta 100.0 6.5E-28 1.4E-32 225.9 13.4 137 1-184 293-430 (445)
13 PRK14321 glmM phosphoglucosami 99.9 1.4E-27 3E-32 223.9 14.1 152 1-201 292-444 (449)
14 PRK15414 phosphomannomutase Cp 99.9 8.6E-28 1.9E-32 225.8 12.4 133 1-180 304-437 (456)
15 cd05803 PGM_like4 This PGM-lik 99.9 2.2E-27 4.8E-32 222.1 14.9 134 1-183 301-435 (445)
16 COG1109 {ManB} Phosphomannomut 99.9 2.6E-27 5.7E-32 223.1 14.1 137 1-183 306-444 (464)
17 cd03088 ManB ManB is a bacteri 99.9 3.5E-27 7.5E-32 221.8 12.6 149 1-184 286-450 (459)
18 cd03087 PGM_like1 This archaea 99.9 7.9E-27 1.7E-31 217.8 13.4 135 1-183 291-426 (439)
19 COG0033 Pgm Phosphoglucomutase 99.9 3.7E-27 8.1E-32 217.0 4.6 181 1-206 343-523 (524)
20 KOG1220 Phosphoglucomutase/pho 99.9 3E-25 6.4E-30 209.7 15.9 192 2-204 390-593 (607)
21 PRK14324 glmM phosphoglucosami 99.9 5.1E-25 1.1E-29 206.6 11.3 139 1-201 303-442 (446)
22 PLN02371 phosphoglucosamine mu 99.9 1.5E-24 3.3E-29 209.6 12.8 150 1-186 393-556 (583)
23 PRK14317 glmM phosphoglucosami 99.9 1.2E-24 2.6E-29 204.9 10.1 127 1-185 316-449 (465)
24 PRK14315 glmM phosphoglucosami 99.9 1.1E-24 2.3E-29 204.3 7.8 127 1-184 304-431 (448)
25 PRK14323 glmM phosphoglucosami 99.9 4.1E-24 8.9E-29 199.8 11.1 128 1-184 295-423 (440)
26 PRK10887 glmM phosphoglucosami 99.9 2.8E-24 6.1E-29 201.2 9.6 130 1-185 298-428 (443)
27 PRK14320 glmM phosphoglucosami 99.9 5.4E-24 1.2E-28 199.3 10.3 129 1-185 298-427 (443)
28 TIGR01455 glmM phosphoglucosam 99.9 5.6E-24 1.2E-28 199.1 9.0 129 1-184 300-429 (443)
29 PRK14314 glmM phosphoglucosami 99.9 9.2E-24 2E-28 198.1 10.0 129 1-185 305-434 (450)
30 PRK14316 glmM phosphoglucosami 99.9 1.2E-23 2.6E-28 197.0 10.3 127 1-184 301-429 (448)
31 PRK14322 glmM phosphoglucosami 99.9 4.2E-23 9E-28 192.6 12.2 123 1-184 291-415 (429)
32 cd05802 GlmM GlmM is a bacteri 99.9 9.7E-24 2.1E-28 196.9 7.7 128 1-184 297-425 (434)
33 PRK14319 glmM phosphoglucosami 99.9 1.1E-22 2.5E-27 189.7 11.6 123 1-185 288-411 (430)
34 cd03086 PGM3 PGM3 (phosphogluc 99.9 6E-23 1.3E-27 195.9 9.8 136 1-184 333-501 (513)
35 PRK14318 glmM phosphoglucosami 99.9 1.2E-22 2.7E-27 190.4 11.0 129 1-185 303-432 (448)
36 cd03084 phosphohexomutase The 99.9 4.7E-22 1E-26 181.0 10.1 66 1-75 242-308 (355)
37 PTZ00302 N-acetylglucosamine-p 99.8 2.8E-19 6E-24 172.7 10.6 130 1-184 397-566 (585)
38 PF02880 PGM_PMM_III: Phosphog 99.8 2.4E-19 5.2E-24 139.0 6.6 69 1-78 44-113 (113)
39 PLN02895 phosphoacetylglucosam 99.8 6.7E-19 1.5E-23 169.2 9.1 129 1-183 365-538 (562)
40 PF00408 PGM_PMM_IV: Phosphogl 99.4 5.2E-14 1.1E-18 101.2 2.6 35 145-182 24-58 (73)
41 KOG2537 Phosphoglucomutase/pho 97.3 0.00057 1.2E-08 65.2 6.8 40 153-199 496-535 (539)
42 COG0033 Pgm Phosphoglucomutase 69.0 6.6 0.00014 37.8 4.1 50 32-90 380-429 (524)
43 COG0124 HisS Histidyl-tRNA syn 40.9 11 0.00025 35.8 0.7 61 148-211 66-159 (429)
44 PF06799 DUF1230: Protein of u 34.3 21 0.00045 29.2 1.1 39 5-45 84-128 (144)
45 COG1965 CyaY Protein implicate 33.2 37 0.0008 26.3 2.3 23 144-167 64-86 (106)
46 cd04931 ACT_PAH ACT domain of 32.2 1.2E+02 0.0026 22.4 4.9 23 158-182 44-66 (90)
47 PF15025 DUF4524: Domain of un 30.4 53 0.0012 26.9 2.9 22 146-167 7-28 (148)
48 PF09960 DUF2194: Uncharacteri 29.7 1.8E+02 0.004 28.9 7.0 23 146-168 544-569 (585)
49 COG3721 HugX Putative heme iro 29.5 1.9E+02 0.0042 24.1 6.0 32 66-106 40-71 (176)
50 cd04880 ACT_AAAH-PDT-like ACT 27.0 1.9E+02 0.0042 19.6 5.0 23 158-182 29-51 (75)
51 PF14085 DUF4265: Domain of un 25.6 2.4E+02 0.0051 21.7 5.7 36 143-182 26-64 (117)
52 cd04905 ACT_CM-PDT C-terminal 25.1 2.2E+02 0.0048 19.7 5.1 23 158-182 31-53 (80)
53 PF00017 SH2: SH2 domain; Int 24.1 51 0.0011 22.7 1.6 13 155-168 21-33 (77)
No 1
>PLN02307 phosphoglucomutase
Probab=100.00 E-value=2.9e-45 Score=352.83 Aligned_cols=213 Identities=74% Similarity=1.203 Sum_probs=177.0
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCccCCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhCC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYGR 80 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg~ 80 (221)
+++|+||||||+++|.+++++||||||||++++|++|||||+||+++++|+++++++..-|+|++||.++|++||++||+
T Consensus 365 ~~~t~vGfk~I~~~m~e~~~~~GgEeSgG~~~~~~~dkDGi~aallllel~a~~~~~~~~~~~~~tl~~~l~el~~~~G~ 444 (579)
T PLN02307 365 FFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKDVLPGGKLVTVEDIVREHWATYGR 444 (579)
T ss_pred EEEcCchHHHHHHHHHhCCcEEEEcccCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCcccccCcCCHHHHHHHHHHHhCC
Confidence 57999999999999999999999999999988899999999999999999999887422234556999999999999999
Q ss_pred ceeeeeeeEecChhHHHHHHHHHHHhhcCCCc--ccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCCeE
Q 027629 81 HYYTRYDYENVDAGAAKELMANLVKMQSSLPE--VNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSR 158 (221)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~--~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~w 158 (221)
|++.+.++.+++.+...++++.|++ .+|. ..+.+.+. +|..+.||.+.++.++.+++.||++|.|+||+|
T Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~lr~---~~~~~~~~~~~~~~-----~v~~~~d~~~~~~~~~~~~~~dglk~~~~dg~w 516 (579)
T PLN02307 445 NFYSRYDYENVDSEAANKMMDHLRD---LVNKSKKGIKYGVY-----TLAFADDFEYTDPVDGSVSSKQGIRFLFTDGSR 516 (579)
T ss_pred CeeeecceecCCHHHHHHHHHHHhc---ccccccCCCEecce-----EEEEEeeceeecCCCCCCCccCeEEEEEcCCeE
Confidence 9999998887655555566665543 2221 11244444 677778887655566678899999999999999
Q ss_pred EEEecCCCCCCCCeEEEEEEeecCCCCccchhHHHHHHHHHHHHHHhcCCcchhCCCCCcccC
Q 027629 159 LVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVEVALKLSKMEQFTGRSAPTVIT 221 (221)
Q Consensus 159 i~vRpSGTEP~~pkiRiY~Ea~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (221)
+++||||||.+|||||+|+|++..+..++..++++++.+++..++++++|++||||++|||||
T Consensus 517 i~~RpSGTE~~~PkiK~Y~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (579)
T PLN02307 517 IIFRLSGTGSAGATIRLYIEQYEKDPSKHGRDAQEALKPLIDVALKLSKLKEFTGRSKPTVIT 579 (579)
T ss_pred EEEEcCCCCCCCCeEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHHhChhHHhCCCCCCccC
Confidence 999999999333399999999777755666789999999999999999999999999999997
No 2
>KOG0625 consensus Phosphoglucomutase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-43 Score=321.60 Aligned_cols=208 Identities=71% Similarity=1.179 Sum_probs=190.4
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCccCCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhCC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYGR 80 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg~ 80 (221)
|++|||||||+++.|..+++.+|||||.|..++|+|+|||+||.++|+.+||+ ++++ .+.++++++|++||+
T Consensus 348 ~yEvPTGWKfF~nLmDAgklsiCGEESFGTGSdHIREKDGiWAvlaWlsIlA~-~k~~-------~vedI~~~~W~~YGR 419 (558)
T KOG0625|consen 348 VYEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSILAH-NKQN-------VVEDIVKEHWAKYGR 419 (558)
T ss_pred eEEcCchHHHHHhhhcccceeecccccccCCccccccccchhhHHHHHHHHHh-cccc-------cHHHHHHHHHHHhCc
Confidence 68999999999999999999999999999999999999999999999999998 4433 499999999999999
Q ss_pred ceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCcc--cc-ccceeeeccccccCCCCCCCCCCCeEEEEEcCCe
Q 027629 81 HYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGIC--SD-VSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGS 157 (221)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~--i~-~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~ 157 (221)
.+++|.+|+.++.+++.++|+.|+.+... + -++... -+ +++|..++||+++||+||++++.+||++.|+||+
T Consensus 420 ~fftRYDYE~~e~e~ank~m~~l~a~~~~-~----~vg~~~~~~~~~y~V~~ad~F~Y~DPvDGSvs~~QGlri~F~dGs 494 (558)
T KOG0625|consen 420 NFFTRYDYEEVEAEGANKMMEDLEALVSD-S----FVGKSFSPGDEVYKVAKADDFEYTDPVDGSVSKKQGLRIVFEDGS 494 (558)
T ss_pred cceeecchhhcChHhHHHHHHHHHHHhcc-c----cccccccCCCceEEEEecCCceecCCCCCcccccCceEEEEcCCc
Confidence 99999999999999999999999987654 1 122211 11 5688899999999999999999999999999999
Q ss_pred EEEEecCCCCCCCCeEEEEEEeecCCCCccchhHHHHHHHHHHHHHHhcCCcchhCCCCCcccC
Q 027629 158 RLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVEVALKLSKMEQFTGRSAPTVIT 221 (221)
Q Consensus 158 wi~vRpSGTEP~~pkiRiY~Ea~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (221)
++++|.|||-..|+.||+|+|.+.++..+...++++.|.+++.-+++.++|++||||..|||||
T Consensus 495 R~VfRLSGTGSsGATiRLYie~ye~d~s~~~~~aq~~LkPli~~alk~~~~~e~tGr~~PTViT 558 (558)
T KOG0625|consen 495 RIVFRLSGTGSSGATIRLYIESYEKDVSKIDQDAQVALKPLIDIALKISKLKEFTGREAPTVIT 558 (558)
T ss_pred EEEEEeccCCCCCceEEEehhhhccchhhhCcCHHHHHHHHHHHHHHHHhHHHhhCCCCCceeC
Confidence 9999999999999999999999999998888899999999999999999999999999999998
No 3
>cd03085 PGM1 Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes. In one direction, G-1-P produced from sucrose catabolism is converted to G-6-P, the first intermediate in glycolysis. In the other direction, conversion of G-6-P to G-1-P generates a substrate for synthesis of UDP-glucose which is required for synthesis of a variety of cellular constituents including cell wall polymers and glycoproteins. The PGM1 family also includes a non-enzymatic PGM-related protein (PGM-RP) thought to play a structural role in eukaryotes, as well as pp63/parafusin, a phosphoglycoprotein that plays an important role in calcium-regulated exocytosis in ciliated protozoans. PGM1 belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl t
Probab=100.00 E-value=8.6e-43 Score=334.09 Aligned_cols=204 Identities=69% Similarity=1.199 Sum_probs=177.2
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCccCCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhCC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYGR 80 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg~ 80 (221)
+++|+||||||+++|.+.+++||||||||++++|+++||||+|+++++++++..++ +|++++++||++||+
T Consensus 341 v~~t~vG~k~I~~~m~~~~~~~GgEeSgg~~~~~~~~kDGi~aal~llella~~g~---------tLsell~~i~~~~G~ 411 (548)
T cd03085 341 LFETPTGWKFFGNLMDAGKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILAHRNV---------SVEDIVKEHWQKYGR 411 (548)
T ss_pred EEEcCchHHHHHHHHhcCCceEEEeccCCccCCCccCCcHHHHHHHHHHHHHHHCc---------CHHHHHHHHHHHhCc
Confidence 57999999999999999999999999999988899999999999999999998766 999999999999999
Q ss_pred ceeeeeeeEecChhHHHHHHHHHHHhhcCCCccccc----ccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCC
Q 027629 81 HYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDI----VKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDG 156 (221)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~----~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg 156 (221)
+++.+.+...|+.+.+.++|+.|.+ ..|.+++. +++. +|..++||.+.++.++.+++.||++|.|+||
T Consensus 412 ~~~~~~~~~~~~~~~k~~im~~l~~---~~~~~~~~~~~~~~~~-----~v~~~~d~~~~~~~~~~~~~~dglk~~~~~g 483 (548)
T cd03085 412 NFYTRYDYEEVDSEAANKMMDHLRA---LVSDLPGVGKSGDKGY-----KVAKADDFSYTDPVDGSVSKKQGLRIIFEDG 483 (548)
T ss_pred ceeecccccCCCHHHHHHHHHHHHh---ccccCccccccccCCc-----eEEEEecceeccCCCCCcChhceEEEEECCC
Confidence 8878877666676777778877754 22222335 7786 7888888875443445688999999999999
Q ss_pred eEEEEecCCCCCCCCeEEEEEEeecCCCCccchhHHHHHHHHHHHHHHhcCCcchhCCCCCcccC
Q 027629 157 SRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVEVALKLSKMEQFTGRSAPTVIT 221 (221)
Q Consensus 157 ~wi~vRpSGTEP~~pkiRiY~Ea~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (221)
+|+++|||||||.|||||+|+|+.+++..+-..+++-.|..+++-++++.+|..||||-.||+||
T Consensus 484 ~wi~iRpSGTE~~~Pkir~Y~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (548)
T cd03085 484 SRIIFRLSGTGSSGATIRLYIESYEKDPSKYGLDAQVALKPLIEIALKLSKLKEFTGREEPTVIT 548 (548)
T ss_pred eEEEEECCCCCCCCceEEEEEEEecCChhhcccCHHHHHHHHHHHHHHHhChHHHhCCCCCCccC
Confidence 99999999999555599999999999987777789999999999999999999999999999997
No 4
>PTZ00150 phosphoglucomutase-2-like protein; Provisional
Probab=100.00 E-value=4.9e-34 Score=275.43 Aligned_cols=183 Identities=23% Similarity=0.353 Sum_probs=138.3
Q ss_pred CeEeccchHHHHHhHhc----C--CcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHH
Q 027629 1 MYQVPTGWKFFGNLMDA----G--LCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRK 73 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~----~--~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~ 73 (221)
+++|+||||||+++|.+ + .++|||||||||+ ++|+++||||+|+++++|++++...++ ++|+++|++
T Consensus 372 v~~t~tGfk~I~~~m~~~~~~~~~~~~~ggEeSgG~~~~~~~~~kDgi~aal~ile~~~~l~~~g------~sL~e~l~~ 445 (584)
T PTZ00150 372 YDETLTGFKWIGNKAIELNAENGLTTLFAYEEAIGFMLGTRVRDKDGVTAAAVVAEMALYLYERG------KTLVEHLES 445 (584)
T ss_pred EEECCCChHHHHHHHHHHHhcCCceEEEEEeccCcccCCCCCCCcHHHHHHHHHHHHHHHHHHcC------CCHHHHHHH
Confidence 57999999999999986 2 4899999999998 999999999999999999976555433 399999999
Q ss_pred HHHhhCCceeeeeeeEecChhHHHHHHHHHHHhhc--CCCcccccccCccccccceeeeccccc-cC--CCCC--CCC--
Q 027629 74 HWATYGRHYYTRYDYENVDAGAAKELMANLVKMQS--SLPEVNDIVKGICSDVSKVVNADEFEY-KD--PVDG--SIS-- 144 (221)
Q Consensus 74 l~~~yg~~~~~~~~~~~~~~~~~~~i~~~l~~~~~--~~p~~~~~~~g~~i~~~~v~~~~d~~~-~d--~~~g--~~~-- 144 (221)
||++||+|+....++...+.+...++++.| +. ++| ++++|. +|..+.||.. .+ ..++ .+|
T Consensus 446 l~~~~G~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~---~~~~g~-----~v~~~~d~~~~~~~~~~~~~~~lp~~ 514 (584)
T PTZ00150 446 LYKQYGYHFTNNSYYICYDPSRIVSIFNDI---RNNGSYP---TKLGGY-----PVTRIRDLTTGYDTATPDGKPLLPVS 514 (584)
T ss_pred HHHHHCCCccceeeEecCCHHHHHHHHHHH---hccCCcc---hhhCCe-----eEEEEEecccccccccCCCcccCCCc
Confidence 999999655444444223444444555544 44 444 489997 7777788742 11 1122 245
Q ss_pred -CCCeEEEEEcCCeEEEEecCCCCCCCCeEEEEEEeecCCCCccchhHHHHHHHHHHHHHH-hcC
Q 027629 145 -KHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVEVALK-LSK 207 (221)
Q Consensus 145 -~~Dgl~~~~~dg~wi~vRpSGTEP~~pkiRiY~Ea~~~~~~~~~~~~~e~l~~~~~~~~~-~~~ 207 (221)
++|||+|.|+||+|+++||||||| |||+|+|+... +..++++++..+++.+.. .++
T Consensus 515 ~~~~~lk~~~~~g~~~~~RpSGTEP---kik~Y~e~~~~----~~~~~~~~~~~~~~~~~~~~~~ 572 (584)
T PTZ00150 515 ASTQMITFYFENGAIITIRGSGTEP---KLKWYAELSGT----KDEAVEKELAALVDEVVEQLMQ 572 (584)
T ss_pred ccCCeEEEEEcCCeEEEEEcCCCCC---eEEEEEEecch----hHHHHHHHHHHHHHHHHHHHhC
Confidence 689999999999999999999999 99999999332 223677777777777666 444
No 5
>cd05801 PGM_like3 This bacterial PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=99.97 E-value=3.2e-30 Score=245.97 Aligned_cols=151 Identities=25% Similarity=0.350 Sum_probs=117.1
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CC-----CCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHH
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SD-----HIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKH 74 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~-----~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l 74 (221)
+++|+||||||+++|.+.+++||||||||++ ++ |.++||||+|+++++++++..++ +|+++++++
T Consensus 349 ~~~t~vG~k~i~~~m~~~~~~~ggEeSgg~~~~~~~~~~~~~~~Dgi~a~l~~le~la~~~~---------~L~~~l~~l 419 (522)
T cd05801 349 LYEVPVGFKWFVDGLLDGSLGFGGEESAGASFLRRDGTVWTTDKDGIIMCLLAAEILAVTGK---------DPGQLYQEL 419 (522)
T ss_pred eeecCccHHHHHHHHhcCCeEEEEeccCceEeccCCCCCcccCchHHHHHHHHHHHHHHhCC---------CHHHHHHHH
Confidence 5799999999999999999999999999997 66 89999999999999999997766 999999999
Q ss_pred HHhhCCceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEc
Q 027629 75 WATYGRHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFE 154 (221)
Q Consensus 75 ~~~yg~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~ 154 (221)
|++||.+++.+.++.+ +.+. +.++.++... ...+ ..+.+. ++..+.||... .+..+||+|+.|+
T Consensus 420 ~~~~g~~~~~~~~v~~-~~~~-k~~~~~~~~~-~~~~---~~~~~~-----~~~~~~~~~~~-----~~~~~DGvk~~~~ 483 (522)
T cd05801 420 TERFGEPYYARIDAPA-TPEQ-KARLKKLSPE-QVTA---TELAGD-----PILAKLTRAPG-----NGASIGGLKVTTA 483 (522)
T ss_pred HHHHCcCeeeccCCCC-hHHH-HHHHHHHhcc-CCCc---hHhCCC-----ceEEEEecccC-----CCccCceEEEEEc
Confidence 9999988888887764 3222 2233333211 0122 135554 44444444311 2347999999999
Q ss_pred CCeEEEEecCCCCCCCCeEEEEEEee
Q 027629 155 DGSRLVFRLSGTGSEGATIRLYIEQY 180 (221)
Q Consensus 155 dg~wi~vRpSGTEP~~pkiRiY~Ea~ 180 (221)
|| |++|||||||| +||+|+|+.
T Consensus 484 ~g-WvliRpSgTEP---~iriy~Ea~ 505 (522)
T cd05801 484 NG-WFAARPSGTED---VYKIYAESF 505 (522)
T ss_pred Ce-EEEEEccCCCc---eEEEEEEec
Confidence 87 99999999999 999999984
No 6
>cd05800 PGM_like2 This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four structural domains (subdomains) with a centrally located active site formed by four loops, one from each subdomain. All four subdomains are included in this alignment model.
Probab=99.97 E-value=5.4e-30 Score=240.42 Aligned_cols=146 Identities=33% Similarity=0.532 Sum_probs=119.8
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYG 79 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg 79 (221)
+++|+|||+||.++|.+.+++||||+|||++ +++.+++||++|+++++++++..++ +|+++++++|++||
T Consensus 302 v~~t~~G~~~v~~~~~~~~~~~g~E~sg~~~~~~~~~~~Dgi~a~l~ile~la~~~~---------~L~~l~~~l~~~~g 372 (461)
T cd05800 302 VYETPVGFKYIAEKMLEEDVLIGGEESGGLGIRGHIPERDGILAGLLLLEAVAKTGK---------PLSELVAELEEEYG 372 (461)
T ss_pred eeeCCCCHHHHHHHHhhCCeEEEEcCcCceeCCCCCCCchHHHHHHHHHHHHHhhCC---------CHHHHHHHHHHHhC
Confidence 5799999999999999999999999999998 9999999999999999999997665 99999999999999
Q ss_pred CceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCCeEE
Q 027629 80 RHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRL 159 (221)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~wi 159 (221)
++++.+.++.+ +.+.+.++++.|.+ ..+. .+.+. ++. .+..+||+|+.|+||+|+
T Consensus 373 ~~~~~~~~i~~-~~~~~~~v~~~l~~---~~~~---~~~~~-----~~~-------------~~~~~dGvrv~~~d~~wv 427 (461)
T cd05800 373 PSYYDRIDLRL-TPAQKEAILEKLKN---EPPL---SIAGG-----KVD-------------EVNTIDGVKLVLEDGSWL 427 (461)
T ss_pred CCceeecCeec-CHHHHHHHHHHHhc---cCch---hhCCc-----eeE-------------EEEecCeEEEEEcCCcEE
Confidence 98888888874 55555667766643 2111 22232 111 133678999999888899
Q ss_pred EEecCCCCCCCCeEEEEEEeecCC
Q 027629 160 VFRLSGTGSEGATIRLYIEQYEKD 183 (221)
Q Consensus 160 ~vRpSGTEP~~pkiRiY~Ea~~~~ 183 (221)
+|||||||| +||+|+|+.+++
T Consensus 428 lvRpS~tep---~iriy~Ea~~~~ 448 (461)
T cd05800 428 LIRPSGTEP---LLRIYAEAPSPE 448 (461)
T ss_pred EEEcCCCCc---eEEEEEecCCHH
Confidence 999999999 999999987643
No 7
>TIGR01132 pgm phosphoglucomutase, alpha-D-glucose phosphate-specific. This enzyme interconverts alpha-D-glucose-1-P and alpha-D-glucose-6-P.
Probab=99.97 E-value=1.1e-29 Score=243.36 Aligned_cols=154 Identities=23% Similarity=0.324 Sum_probs=116.3
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CC-----CCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHH
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SD-----HIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKH 74 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~-----~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l 74 (221)
+++|+||||||+++|.+.+++||||||||++ +. |.+++|||+|+++++++++..++ +|+++++++
T Consensus 365 v~~t~vG~k~i~~~m~~~~~~~ggEeSgg~~~~~~~~~~~~~~~Dgi~a~l~ile~la~~~~---------~L~~ll~~l 435 (543)
T TIGR01132 365 LVEVPVGFKWFVDGLFDGSFGFGGEESAGASFLRFDGTPWSTDKDGIIMCLLAAEITAVTGK---------NPQQHYNEL 435 (543)
T ss_pred eeecCccHHHHHHHHhcCCeEEEEeccCceEecccCCCCcccCcHHHHHHHHHHHHHHHhCC---------CHHHHHHHH
Confidence 5799999999999999999999999999996 44 89999999999999999997766 999999999
Q ss_pred HHhhCCceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEc
Q 027629 75 WATYGRHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFE 154 (221)
Q Consensus 75 ~~~yg~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~ 154 (221)
+++||.+++.+.++.+ +... +.+++.|.+. ..+| +.+++. ++... +... ...+..+||+|+.|+
T Consensus 436 p~~~~~~~~~~~~~~~-~~~~-k~~~~~l~~~-~~~~---~~~~~~-----~~~~~--~~~~---~~~~~~~DGvki~~~ 499 (543)
T TIGR01132 436 AAKFGAPSYNRIQAPA-TSAQ-KARLKKLSPE-MVSA---TTLAGD-----PITAR--LTAA---PGNGAAIGGLKVTTD 499 (543)
T ss_pred HHHhCCceEEEEecCC-hHHH-HHHHHHHhcc-CCCh---HHhCCc-----eeEEE--Eecc---CCCCccCCeEEEEEc
Confidence 9999987776665543 3322 2233445321 1223 367776 33221 0000 012446999999998
Q ss_pred CCeEEEEecCCCCCCCCeEEEEEEee-cCC
Q 027629 155 DGSRLVFRLSGTGSEGATIRLYIEQY-EKD 183 (221)
Q Consensus 155 dg~wi~vRpSGTEP~~pkiRiY~Ea~-~~~ 183 (221)
|| |++|||||||| +||+|+|+. +.+
T Consensus 500 ~g-WvliRpSgTEP---~irvy~Ea~~~~~ 525 (543)
T TIGR01132 500 NG-WFAARPSGTED---VYKIYCESFKGEE 525 (543)
T ss_pred Cc-EEEEecCCCCc---eEEEEEEecCCHH
Confidence 86 99999999999 999999994 543
No 8
>PRK07564 phosphoglucomutase; Validated
Probab=99.96 E-value=1.7e-29 Score=242.17 Aligned_cols=149 Identities=32% Similarity=0.499 Sum_probs=112.4
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-C-----CCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHH
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-S-----DHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKH 74 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~-----~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l 74 (221)
+++|+||||||+++|.+.+++||||||||++ . .|+++||||+|++++||+++..++ +|+++++++
T Consensus 364 v~~t~vG~k~i~~~m~~~~~~~ggEeSgg~~~~~~~~~~~~~~~Dgi~a~l~ile~la~~~~---------~L~ell~~l 434 (543)
T PRK07564 364 LYEVPVGFKWFVNGLDDGSLGFGGEESAGASFLRRDGSVWTTDKDGLIAVLLAAEILAVTGK---------SPSEIYREL 434 (543)
T ss_pred eeecchHHHHHHHHHhcCceEEEecCcCCeeecccCCCCccccchHHHHHHHHHHHHHHhCC---------CHHHHHHHH
Confidence 5799999999999999999999999999984 3 289999999999999999997766 999999999
Q ss_pred HHhhCCceeeeeeeEecChhHHHHHHHHHHHhhcCC--CcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEE
Q 027629 75 WATYGRHYYTRYDYENVDAGAAKELMANLVKMQSSL--PEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYL 152 (221)
Q Consensus 75 ~~~yg~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~--p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~ 152 (221)
|++||++|+.+.++.+ ..+.+. .++.|. ... |. .+.+. ++....+. .| ++. ..+||||+.
T Consensus 435 ~~~~g~~~~~~~~~~~-~~~~k~-~~~~l~---~~~~~~~---~~~~~-----~~~~~~~~--~~--~~~-~~~DGlki~ 496 (543)
T PRK07564 435 WARFGRPYYSRHDAPA-TPEQKA-ALRKLS---PELVGAT---ELAGD-----PIDASLTE--AP--GNG-AAIGGLKVV 496 (543)
T ss_pred HHHhCCceEEEecCCc-cHHHHH-HHHHHh---ccCCCch---hhCCc-----ceEEEEec--Cc--CCc-ccCCeEEEE
Confidence 9999988877776653 333222 244443 221 11 45554 22110010 00 011 258999999
Q ss_pred EcCCeEEEEecCCCCCCCCeEEEEEEee
Q 027629 153 FEDGSRLVFRLSGTGSEGATIRLYIEQY 180 (221)
Q Consensus 153 ~~dg~wi~vRpSGTEP~~pkiRiY~Ea~ 180 (221)
|+|| |++|||||||| +||+|+|+.
T Consensus 497 ~~~g-WvlvRpSgTEP---~iriy~Ea~ 520 (543)
T PRK07564 497 TENG-WFAARPSGTET---TYKIYAESF 520 (543)
T ss_pred EcCC-EEEEEccCCCC---eEEEEEEec
Confidence 9997 99999999999 999999995
No 9
>cd03089 PMM_PGM The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e.g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other membe
Probab=99.96 E-value=4.7e-29 Score=233.14 Aligned_cols=138 Identities=22% Similarity=0.193 Sum_probs=109.0
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CC-CCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhh
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SD-HIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATY 78 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~-~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~y 78 (221)
+++|+||||||+++|.+.+++||||||||++ ++ |.+++||++++++++|+++..++ +|+++++++++
T Consensus 292 v~~t~vG~k~v~~~m~~~~~~~ggE~sgg~~~~~~~~~~~Dgi~a~l~ile~la~~~~---------~Lsel~~~~p~-- 360 (443)
T cd03089 292 PIMWKTGHSFIKAKMKETGALLAGEMSGHIFFKDRWYGFDDGIYAALRLLELLSKSGK---------TLSELLADLPK-- 360 (443)
T ss_pred EEEecCcHHHHHHHHHHhCCcEEEeccceEEEcCCcCCCccHHHHHHHHHHHHHhcCC---------CHHHHHHhccc--
Confidence 5799999999999999999999999999998 98 99999999999999999998766 99999998765
Q ss_pred CCceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCCeE
Q 027629 79 GRHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSR 158 (221)
Q Consensus 79 g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~w 158 (221)
+++..++++. |+...+..+++.|.+... . ++. .+..+||+|+.|+|| |
T Consensus 361 -~~~~~~~~~~-~~~~~k~~~~~~l~~~~~----------~------~~~-------------~~~~~DGiki~~~~~-W 408 (443)
T cd03089 361 -YFSTPEIRIP-VTEEDKFAVIERLKEHFE----------F------PGA-------------EIIDIDGVRVDFEDG-W 408 (443)
T ss_pred -cCCCCceecc-CCchhHHHHHHHHHHHhc----------c------ccC-------------CeeeecCEEEEECCe-e
Confidence 2233344444 343455567776654211 1 000 134689999999875 9
Q ss_pred EEEecCCCCCCCCeEEEEEEeecCCC
Q 027629 159 LVFRLSGTGSEGATIRLYIEQYEKDP 184 (221)
Q Consensus 159 i~vRpSGTEP~~pkiRiY~Ea~~~~~ 184 (221)
++|||||||| +||+|+|+.+++.
T Consensus 409 vliRpSgtEP---~iriy~Ea~~~~~ 431 (443)
T cd03089 409 GLVRASNTEP---VLVLRFEADTEEG 431 (443)
T ss_pred EEEeecCCCC---EEEEEEEeCCHHH
Confidence 9999999999 9999999976543
No 10
>cd05799 PGM2 This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/ph
Probab=99.95 E-value=1e-27 Score=226.60 Aligned_cols=137 Identities=26% Similarity=0.337 Sum_probs=109.6
Q ss_pred CeEeccchHHHHHhHhcC-----CcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHH
Q 027629 1 MYQVPTGWKFFGNLMDAG-----LCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKH 74 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~-----~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l 74 (221)
+++|+||||||.++|.+. +++||||||||++ ++|.+++||++|+++++||++.+++++ ++|+++++++
T Consensus 330 v~~t~~G~~~i~~~m~~~~~~~~~~~~ggE~sgg~~~~~~~~~~Dgi~a~~~lle~la~~~~~~------~~Ls~l~~~l 403 (487)
T cd05799 330 VEETLTGFKWIGNKIEELESGGKKFLFGFEESIGYLVGPFVRDKDGISAAALLAEMAAYLKAQG------KTLLDRLDEL 403 (487)
T ss_pred EEECCCCchHHHHHHHHHhccCceEEEEEeccceeeeCCCCCCchHHHHHHHHHHHHHHHHHcC------CCHHHHHHHH
Confidence 579999999999999874 7899999999998 999999999999999999999754323 3999999999
Q ss_pred HHhhCCceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEc
Q 027629 75 WATYGRHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFE 154 (221)
Q Consensus 75 ~~~yg~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~ 154 (221)
|++||++++.+.++.+.+......+-+.|+++. . ..||+|+.|+
T Consensus 404 ~~~y~~~~~~~~~i~~~~~~~~~~~~~v~~~l~-----------~-------------------------~~DGvki~~~ 447 (487)
T cd05799 404 YEKYGYYKEKTISITFEGKEGPEKIKAIMDRLR-----------N-------------------------NPNVLTFYLE 447 (487)
T ss_pred HHHhCceEEeeeeEEEeCCCCHHHHHHHHHHHh-----------c-------------------------cCCEEEEEEc
Confidence 999998888887777622111112222222210 1 0179999999
Q ss_pred CCeEEEEecCCCCCCCCeEEEEEEeecC
Q 027629 155 DGSRLVFRLSGTGSEGATIRLYIEQYEK 182 (221)
Q Consensus 155 dg~wi~vRpSGTEP~~pkiRiY~Ea~~~ 182 (221)
||+|++|||||||| +||+|+|+.+.
T Consensus 448 dg~WvliRpS~teP---~~riy~Ea~~~ 472 (487)
T cd05799 448 DGSRVTVRPSGTEP---KIKFYIEVVGK 472 (487)
T ss_pred CCEEEEEEcCCCCc---eEEEEEEeecc
Confidence 98899999999999 99999999984
No 11
>cd05805 MPG1_transferase GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity. The protein contains an N-terminal NTP transferase domain, an L-beta-H domain, and a C-terminal PGM-like domain that belongs to the alpha-D-phosphohexomutase superfamily. This subfamily is limited to bacteria and archaea. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this group appear to lack conserved residues necessary for metal binding and catalytic activity. Other members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional
Probab=99.95 E-value=3.1e-28 Score=227.55 Aligned_cols=133 Identities=17% Similarity=0.169 Sum_probs=106.9
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYG 79 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg 79 (221)
+++|+||||||+++|.+ +++||||||||++ ++|.+++||++++++++++++..++ +|+++++++|+.|+
T Consensus 295 ~~~t~vG~~~i~~~m~~-~~~~ggE~sG~~~~~~~~~~~Dgi~a~l~lle~la~~~~---------~l~~l~~~l~~~~~ 364 (441)
T cd05805 295 VIRTKTSPQALMEAALE-NVVLAGDGDGGFIFPEFHPGFDAIAALVKILEMLARTNI---------SLSQIVDELPRFYV 364 (441)
T ss_pred EEEEeCChHHHHHHHHh-cccccccCCCcEEccccccCchHHHHHHHHHHHHHhcCC---------CHHHHHHhCchhhe
Confidence 47999999999999999 8999999999998 9999999999999999999997666 99999999886654
Q ss_pred CceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCCeEE
Q 027629 80 RHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRL 159 (221)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~wi 159 (221)
.+.++.+ +...+.++++.|.. . +... .+..+||+|+.|+|| |+
T Consensus 365 ----~~~~~~~-~~~~~~~~~~~l~~---~-------~~~~---------------------~~~~~DGvri~~~~g-W~ 407 (441)
T cd05805 365 ----LHKEVPC-PWEAKGRVMRRLIE---E-------APDK---------------------SIELIDGVKIYEDDG-WV 407 (441)
T ss_pred ----eeeEEEC-ChHHhhHHHHHHHH---h-------cCCC---------------------CceecceeEEecCCC-EE
Confidence 3344553 43444456666643 1 1010 133689999999986 99
Q ss_pred EEecCCCCCCCCeEEEEEEeecCC
Q 027629 160 VFRLSGTGSEGATIRLYIEQYEKD 183 (221)
Q Consensus 160 ~vRpSGTEP~~pkiRiY~Ea~~~~ 183 (221)
+|||||||| +||+|+|+.+++
T Consensus 408 liRpS~TeP---~iri~~Ea~~~~ 428 (441)
T cd05805 408 LVLPDADEP---LCHIYAEGSDQE 428 (441)
T ss_pred EEecCCCCC---EEEEEEecCCHH
Confidence 999999999 999999987643
No 12
>PRK09542 manB phosphomannomutase/phosphoglucomutase; Reviewed
Probab=99.95 E-value=6.5e-28 Score=225.93 Aligned_cols=137 Identities=21% Similarity=0.305 Sum_probs=104.1
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYG 79 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg 79 (221)
+++|+||||||+++|.+.+++||||||||++ +++.+++||++++++++++++..++ +|++++++ |++|.
T Consensus 293 ~~~t~vG~~~i~~~m~~~~~~~ggE~sgg~~f~~~~~~~Dgi~a~~~lle~l~~~~~---------~l~~l~~~-~~~~~ 362 (445)
T PRK09542 293 PVRTRVGHSFIKALMAETGAIFGGEHSAHYYFRDFWGADSGMLAALHVLAALGEQDR---------PLSELMAD-YQRYA 362 (445)
T ss_pred EEEecCcHHHHHHHHHHhCCcEEEeeeccEEecCcCCCCcHHHHHHHHHHHHHhcCC---------CHHHHHHh-hhhcC
Confidence 4799999999999999999999999999998 9999999999999999999997766 99998886 34432
Q ss_pred CceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCCeEE
Q 027629 80 RHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRL 159 (221)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~wi 159 (221)
...+..+.. ..+..+++.|... +.+ ++. .+..+||+|+.|+||+|+
T Consensus 363 --~~~~~~~~~---~~~~~~~~~l~~~----------~~~------~~~-------------~~~~~DGvki~~~dg~Wv 408 (445)
T PRK09542 363 --ASGEINSTV---ADAPARMEAVLKA----------FAD------RIV-------------SVDHLDGVTVDLGDGSWF 408 (445)
T ss_pred --cccceeecC---CCHHHHHHHHHHH----------hhh------ccC-------------CceecceEEEEecCCcEE
Confidence 222333332 1223355554321 111 100 133689999999988899
Q ss_pred EEecCCCCCCCCeEEEEEEeecCCC
Q 027629 160 VFRLSGTGSEGATIRLYIEQYEKDP 184 (221)
Q Consensus 160 ~vRpSGTEP~~pkiRiY~Ea~~~~~ 184 (221)
+|||||||| +||+|+|+.+++.
T Consensus 409 liRpSgTEP---~lriy~Ea~~~e~ 430 (445)
T PRK09542 409 NLRASNTEP---LLRLNVEARTEEE 430 (445)
T ss_pred EEEecCCCc---EEEEEEEeCCHHH
Confidence 999999999 9999999976443
No 13
>PRK14321 glmM phosphoglucosamine mutase; Provisional
Probab=99.95 E-value=1.4e-27 Score=223.93 Aligned_cols=152 Identities=18% Similarity=0.141 Sum_probs=114.0
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYG 79 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg 79 (221)
+++|+|||+||.++|.+.+++|||||||||+ ++|.+++||++|+++++++++..+ +|+++++++ |
T Consensus 292 v~~t~vG~~~i~~~m~~~~~~~ggE~sGg~~~~~~~~~~Dgi~a~~~ile~la~~~----------~Ls~l~~~~----~ 357 (449)
T PRK14321 292 VIRTRVGDVAVAEELAKHGGVFGGEPSGTWIIPQWNLTPDGIFAGALVLEMIDRLG----------PISELAKEV----P 357 (449)
T ss_pred EEEEecChHHHHHHHHhhCCEEEecCCCCEEeCCcCCCCCHHHHHHHHHHHHHcCC----------CHHHHHHhc----c
Confidence 4799999999999999989999999999998 999999999999999999999442 689988764 4
Q ss_pred CceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCCeEE
Q 027629 80 RHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRL 159 (221)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~wi 159 (221)
.+|+.+.++.+ +.+.+.++++.|.+.. +. .+... .+..+||+|+.++|| |+
T Consensus 358 ~~~~~~~~v~~-~~~~k~~~~~~l~~~~---~~---~~~~~---------------------~v~~~DGvkv~~~~~-Wv 408 (449)
T PRK14321 358 RYVTLRAKIPC-PNEKKAKAMEIIAKEA---LK---NFDYE---------------------RLIDIDGIRIENDDW-WI 408 (449)
T ss_pred ccccccccccC-chhhHHHHHHHHHHHh---hh---hcccC---------------------ceeecceEEEecCCc-EE
Confidence 55677777774 4445566766663311 10 11110 144789999999775 99
Q ss_pred EEecCCCCCCCCeEEEEEEeecCCCCccchhHHHHHHHHHHH
Q 027629 160 VFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVEV 201 (221)
Q Consensus 160 ~vRpSGTEP~~pkiRiY~Ea~~~~~~~~~~~~~e~l~~~~~~ 201 (221)
+|||||||| +||+|+|+.+++.++ +..+++.++++.
T Consensus 409 liRpS~TeP---~~riy~Ea~s~e~~~---~l~~~~~~~i~~ 444 (449)
T PRK14321 409 LFRPSGTEP---IMRITLEAHTEEKAE---ELMEKAEKLVKE 444 (449)
T ss_pred EEecCCCCc---eEEEEEecCCHHHHH---HHHHHHHHHHHH
Confidence 999999999 999999997755443 334444444443
No 14
>PRK15414 phosphomannomutase CpsG; Provisional
Probab=99.95 E-value=8.6e-28 Score=225.85 Aligned_cols=133 Identities=22% Similarity=0.242 Sum_probs=102.7
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYG 79 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg 79 (221)
+++|+||||||+++|.+.+++||||||||++ ++|.+++|||+|+++++++++..++ +|+++++++|++|+
T Consensus 304 ~~~t~vG~~~i~~~m~~~~~~~ggE~sgg~~~~~~~~~~Dgi~a~~~ile~la~~~~---------~L~~l~~~~~~~~~ 374 (456)
T PRK15414 304 PVMSKTGHAFIKERMRKEDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVAELVCLKGK---------TLGELVRDRMAAFP 374 (456)
T ss_pred EEEecCcHHHHHHHHHhcCCeEEEcccceEEeCCCCCCccHHHHHHHHHHHHHccCC---------CHHHHHHHHHHhcC
Confidence 4689999999999999999999999999998 9999999999999999999997665 99999999999998
Q ss_pred CceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCCeEE
Q 027629 80 RHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRL 159 (221)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~wi 159 (221)
. +.+.+.....+ ..++..+.+.... .. . .+..+||+|+.|+| +|+
T Consensus 375 ~--~~~~~~~~~~~---~~~~~~~~~~~~~------~~--~---------------------~~~~~DGvki~~~~-~~l 419 (456)
T PRK15414 375 A--SGEINSKLAQP---VEAINRVEQHFSR------EA--L---------------------AVDRTDGISMTFAD-WRF 419 (456)
T ss_pred C--CCccccCCCCH---HHHHHHHHHHhcc------cc--C---------------------cEEecceeEEEeCC-ceE
Confidence 5 22332332111 1123333221010 00 0 13468999999976 478
Q ss_pred EEecCCCCCCCCeEEEEEEee
Q 027629 160 VFRLSGTGSEGATIRLYIEQY 180 (221)
Q Consensus 160 ~vRpSGTEP~~pkiRiY~Ea~ 180 (221)
+|||||||| +||+|+|+.
T Consensus 420 llRpSgTEP---~iri~~Ea~ 437 (456)
T PRK15414 420 NLRSSNTEP---VVRLNVESR 437 (456)
T ss_pred EEecCCCce---EEEEEEecC
Confidence 999999999 999999987
No 15
>cd05803 PGM_like4 This PGM-like (phosphoglucomutase-like) domain is located C-terminal to a mannose-1-phosphate guanyltransferase domain in a protein of unknown function that is found in both prokaryotes and eukaryotes. This domain belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=99.95 E-value=2.2e-27 Score=222.14 Aligned_cols=134 Identities=22% Similarity=0.216 Sum_probs=109.8
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYG 79 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg 79 (221)
+++|+||||||+++|.+.+++||||||||++ ++|.+++||++++++++++++..++ +|+++++++++
T Consensus 301 v~~t~vG~~~i~~~~~~~~~~~g~E~sg~~~~~~~~~~~Dgi~a~l~~le~la~~~~---------~L~~l~~~~~~--- 368 (445)
T cd05803 301 VFRSAVGEANVVEKMKEVDAVIGGEGNGGVILPDVHYGRDSLVGIALVLQLLAASGK---------PLSEIVDELPQ--- 368 (445)
T ss_pred EEEecccHHHHHHHHHhcCCeEEEeccCCeecCCccccccHHHHHHHHHHHHHhcCC---------CHHHHHHhchh---
Confidence 4799999999999999999999999999998 9999999999999999999997776 99999999874
Q ss_pred CceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCCeEE
Q 027629 80 RHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRL 159 (221)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~wi 159 (221)
+++.+.++.+ +.+.+.++++.|.+ +.+ .. .++.+||+|+.|+|| |+
T Consensus 369 -~~~~~~~v~~-~~~~~~~i~~~l~~---~~~-------~~---------------------~v~~~DGik~~~~~~-W~ 414 (445)
T cd05803 369 -YYISKTKVTI-AGEALERLLKKLEA---YFK-------DA---------------------EASTLDGLRLDSEDS-WV 414 (445)
T ss_pred -hheeeeeeec-cHHhHHHHHHHHHH---hcc-------cC---------------------CcccCceEEEecCCe-EE
Confidence 3455666664 44455567766643 211 10 144689999999975 99
Q ss_pred EEecCCCCCCCCeEEEEEEeecCC
Q 027629 160 VFRLSGTGSEGATIRLYIEQYEKD 183 (221)
Q Consensus 160 ~vRpSGTEP~~pkiRiY~Ea~~~~ 183 (221)
+|||||||| ++|+|+|+.+++
T Consensus 415 liRpS~teP---~~riy~Ea~s~e 435 (445)
T cd05803 415 HVRPSNTEP---IVRIIAEAPTQD 435 (445)
T ss_pred EEeccCCcc---EEEEEEecCCHH
Confidence 999999999 999999987643
No 16
>COG1109 {ManB} Phosphomannomutase [Carbohydrate transport and metabolism]
Probab=99.95 E-value=2.6e-27 Score=223.07 Aligned_cols=137 Identities=27% Similarity=0.385 Sum_probs=105.2
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHH-HHHhh
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRK-HWATY 78 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~-l~~~y 78 (221)
+++|+||||||+++|++.+++||||||||++ ++|++++||+++++++++|++++++ +|++++.. ++..|
T Consensus 306 ~~~t~vG~~~i~~~~~~~~~~~g~E~sg~~~~~~~~~~~Dgi~aal~ilel~~~~~~---------~lsel~~~~~~~~~ 376 (464)
T COG1109 306 VVRTKVGDKYIAEKMRENGAVFGGEESGHIIFPDHVRTGDGLLAALLVLELLAESGK---------SLSELLAELLPKYP 376 (464)
T ss_pred EEEecCchHHHHHHHHhcCCeEEEcccCCEEECCCCcCCcHHHHHHHHHHHHHHhCC---------CHHHHHHhhccccC
Confidence 4799999999999999999999999999998 9999999999999999999998887 89999998 54433
Q ss_pred CCceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCCeE
Q 027629 79 GRHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSR 158 (221)
Q Consensus 79 g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~w 158 (221)
+ + .+.++.+.+......+.+.+...+. . . + +.++||+++.++||+|
T Consensus 377 ~--~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~---~-----~----------------~~~idgv~~~~~~g~~ 422 (464)
T COG1109 377 Q--S-VEINVRVTDEGKAEVLEKLLEELRE-------A---K-----K----------------VDTIDGVKVELEDGGR 422 (464)
T ss_pred C--c-ceEeEEEccchhhhHHHHHHHhCcc-------c---c-----e----------------eeeeeeEEEEeCCCcE
Confidence 3 2 5556665333222233333322110 0 1 1 2357999999999843
Q ss_pred EEEecCCCCCCCCeEEEEEEeecCC
Q 027629 159 LVFRLSGTGSEGATIRLYIEQYEKD 183 (221)
Q Consensus 159 i~vRpSGTEP~~pkiRiY~Ea~~~~ 183 (221)
.+|||||||| +||+|+|+.+++
T Consensus 423 ~lvRpSGTEP---~lrvy~Ea~~~~ 444 (464)
T COG1109 423 VLVRPSGTEP---LIRVYVEAKDEE 444 (464)
T ss_pred EEEEeCCCce---EEEEEEEECCHH
Confidence 3999999999 999999999443
No 17
>cd03088 ManB ManB is a bacterial phosphomannomutase (PMM) that catalyzes the conversion of mannose 6-phosphate to mannose-1-phosphate in the second of three steps in the GDP-mannose pathway, in which GDP-D-mannose is synthesized from fructose-6-phosphate. In Mycobacterium tuberculosis, the causative agent of tuberculosis, PMM is involved in the biosynthesis of mannosylated lipoglycans that participate in the association of mycobacteria with host macrophage phagocytic receptors. ManB belongs to the the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrall
Probab=99.94 E-value=3.5e-27 Score=221.81 Aligned_cols=149 Identities=18% Similarity=0.221 Sum_probs=109.2
Q ss_pred CeEeccchHHHHHhHhc-----CCcEEEeccCCCcc-CC----------CCCCCcHHHHHHHHHHHHHHhcccCCCCCCc
Q 027629 1 MYQVPTGWKFFGNLMDA-----GLCSICGEESFGTG-SD----------HIREKDGIWAVLAWLSILAHKNKENLDGGKL 64 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~-----~~~~~GgEESgG~~-~~----------~~~dkDGi~aal~~lel~a~~~~~~~~~~~~ 64 (221)
+++|+||||||+++|.+ ..++||+|||||++ ++ |.++||||+++++++++++..++
T Consensus 286 ~~~t~vG~~~i~~~m~~~~~~~~~~~~g~E~sg~~~~~~~~~~~~~~~~~~~~~Dgi~a~l~ile~l~~~~~-------- 357 (459)
T cd03088 286 VVRTRIGSPYVIAAMAEAAAAGAGRVVGYEANGGFLLGSDIERNGRTLKALPTRDAVLPILAVLAAAKEAGI-------- 357 (459)
T ss_pred EEECCCccHHHHHHHHHHHhcCCceEEEEecccceeccchhhccccccccCCCccHHHHHHHHHHHHHhcCC--------
Confidence 57999999999999986 24899999999997 75 56799999999999999987765
Q ss_pred cCHHHHHHHHHHhhCCceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCC
Q 027629 65 VTVEDIVRKHWATYGRHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSIS 144 (221)
Q Consensus 65 ~tL~ell~~l~~~yg~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~ 144 (221)
+|++++++++++|+ +.. .+..|+.+.+..++++|.+ +.+ ...++ |...+.....+.
T Consensus 358 -~Ls~ll~~l~~~~~--~~~--~i~~~~~~~~~~~m~~l~~---~~~----~~~~~------------~~~~~~~~~~v~ 413 (459)
T cd03088 358 -PLSELVASLPARFT--ASD--RLQNFPTEKSQALIARLSA---DPE----ARAAF------------FFALGGEVASID 413 (459)
T ss_pred -CHHHHHHHHhhcce--Ehh--ccccCCHHHHHHHHHHHHh---ChH----hhhhh------------hhccCCcccccC
Confidence 99999999998887 222 2332344445566666643 211 01000 000000001256
Q ss_pred CCCeEEEEEcCCeEEEEecCCCCCCCCeEEEEEEeecCCC
Q 027629 145 KHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDP 184 (221)
Q Consensus 145 ~~Dgl~~~~~dg~wi~vRpSGTEP~~pkiRiY~Ea~~~~~ 184 (221)
.+||+|+.|+||+|++|||||||| ++|+|+|+.+++.
T Consensus 414 ~~DGvk~~~~dg~W~liRpSgTEP---~~riy~Ea~~~~~ 450 (459)
T cd03088 414 TTDGLRMTFANGDIVHLRPSGNAP---ELRCYVEADSEER 450 (459)
T ss_pred CCCeEEEEECCCCEEEEECCCCCc---eEEEEEecCCHHH
Confidence 899999999888899999999999 9999999876543
No 18
>cd03087 PGM_like1 This archaeal PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=99.94 E-value=7.9e-27 Score=217.82 Aligned_cols=135 Identities=23% Similarity=0.287 Sum_probs=109.0
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYG 79 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg 79 (221)
+++|+||||||+++|.+.+++||||||||++ ++|.+++||++|+++++++++.. + +|++++++++
T Consensus 291 ~~~~~~G~k~i~~~m~~~~~~~ggE~sgg~~~~~~~~~~Dgi~a~~~lle~l~~~-~---------~l~~~~~~~~---- 356 (439)
T cd03087 291 VIRTPVGDVHVAEEMIENGAVFGGEPNGGWIFPDHQLCRDGIMTAALLLELLAEE-K---------PLSELLDELP---- 356 (439)
T ss_pred EEEEecChHHHHHHHHhcCCeEEecCCCCEecCCcCCcCCHHHHHHHHHHHHhcC-C---------CHHHHHHhcc----
Confidence 4799999999999999999999999999998 99999999999999999999987 6 9999999873
Q ss_pred CceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCCeEE
Q 027629 80 RHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRL 159 (221)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~wi 159 (221)
.+|+.+.++.+ +.+.+..++++|.+. .+. . +. .+..+||+|+.++| +|+
T Consensus 357 ~~~~~~~~v~~-~~~~~~~i~~~l~~~---~~~---~--~~---------------------~i~~~DG~k~~~~~-~Wv 405 (439)
T cd03087 357 KYPLLREKVEC-PDEKKEEVMEAVEEE---LSD---A--DE---------------------DVDTIDGVRIEYED-GWV 405 (439)
T ss_pred ccccccccccC-ChHhHHHHHHHHHHh---hhh---c--cC---------------------CeeecceEEEecCC-cEE
Confidence 33556666654 445566677766541 110 0 11 13468999999998 599
Q ss_pred EEecCCCCCCCCeEEEEEEeecCC
Q 027629 160 VFRLSGTGSEGATIRLYIEQYEKD 183 (221)
Q Consensus 160 ~vRpSGTEP~~pkiRiY~Ea~~~~ 183 (221)
+|||||||| ++|+|+|+.+++
T Consensus 406 liRpS~tep---~~rvy~Ea~~~~ 426 (439)
T cd03087 406 LIRPSGTEP---KIRITAEAKTEE 426 (439)
T ss_pred EEeccCCcc---EEEEEEeeCCHH
Confidence 999999999 999999987644
No 19
>COG0033 Pgm Phosphoglucomutase [Carbohydrate transport and metabolism]
Probab=99.93 E-value=3.7e-27 Score=216.97 Aligned_cols=181 Identities=34% Similarity=0.511 Sum_probs=140.9
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCccCCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhCC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYGR 80 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg~ 80 (221)
|+||||||||+.+.+..+.+-||||||- ..+|+|.|||+|+.++|+.+||-++.+.. -+..+.-+++|..||+
T Consensus 343 lyEvPvG~K~F~~~l~~g~~~~~GEESa--Ga~~lRek~g~Wa~~~~~~Ilall~aei~-----a~t~~~~~~~y~~~~r 415 (524)
T COG0033 343 LYEVPVGFKWFVDGLDAGSFGFGGEESA--GASFLREKGGVWATDKDGNILALLAAEIT-----AVTGKIPQEHYAELGR 415 (524)
T ss_pred eEEcCCcceeeeccccccceeecccccc--cccceecCCCceeeechhHHHHHHhhhch-----hhhccCHHHHHHHHHH
Confidence 6899999999999999999999999993 37799999999999999999998875432 1444455556666655
Q ss_pred ceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCCeEEE
Q 027629 81 HYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRLV 160 (221)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~wi~ 160 (221)
-|+ +.+|+-++.+...+..+.|+++... .+.+. .+....||.+.||.+|+...++||++.|++| |+.
T Consensus 416 ~~~-~~~Yervda~aa~~~~a~L~~ls~~------~v~~t-----~l~g~~~~a~~~~~~Gn~s~~~GLkV~~~ng-~fa 482 (524)
T COG0033 416 NFG-RPDYERVDAEAANAQKARLRKLSPE------MVSAT-----TLAGDPITAYLTPAPGNGAAIGGLKVTTENG-WFA 482 (524)
T ss_pred HhC-cccHHHhcCchhHHHHHHHHhhCcc------cCCcc-----ccCCCcchhcccCCCCchhhcCceEEEeeCc-EEE
Confidence 333 4455544555566777778776432 22222 2222346778888889999999999999998 999
Q ss_pred EecCCCCCCCCeEEEEEEeecCCCCccchhHHHHHHHHHHHHHHhc
Q 027629 161 FRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVEVALKLS 206 (221)
Q Consensus 161 vRpSGTEP~~pkiRiY~Ea~~~~~~~~~~~~~e~l~~~~~~~~~~~ 206 (221)
.||||||. .+|+|+|....++ ++.+.|+++++++..+++.+
T Consensus 483 ~R~SGT~~---t~kiY~Esf~~~~--h~~~~q~~~~~iV~~~~~~a 523 (524)
T COG0033 483 ARPSGTEA---TYKIYAESFEGDE--HLKQIQKEAAEIVSEVLKIA 523 (524)
T ss_pred EecCCcch---hhhhhhhhhCChH--HHHHHHHHHHHHHHHHHhhc
Confidence 99999998 9999999998877 77799999999999998765
No 20
>KOG1220 consensus Phosphoglucomutase/phosphomannomutase [Carbohydrate transport and metabolism]
Probab=99.93 E-value=3e-25 Score=209.69 Aligned_cols=192 Identities=21% Similarity=0.266 Sum_probs=146.1
Q ss_pred eEeccchHHHHHhHhc----CC-cEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcc-cCCCCCCccCHHHHHHHH
Q 027629 2 YQVPTGWKFFGNLMDA----GL-CSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNK-ENLDGGKLVTVEDIVRKH 74 (221)
Q Consensus 2 ~~t~tGfk~I~~~m~~----~~-~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~-~~~~~~~~~tL~ell~~l 74 (221)
.+|+||||||+++..+ ++ .+||+|||+||+ +.++.||||++|++.+++|+++++. ++. ||.+.|.++
T Consensus 390 ~~tltGFKwvgnrAieL~k~G~~v~fA~Ees~gym~g~~~~dkDGv~a~v~~a~~~~~lr~~~~~------sl~e~l~~l 463 (607)
T KOG1220|consen 390 EETLTGFKWVGNRAIELEKDGKEVHFAFEESIGYMFGENHLDKDGVSAAVKFASMACRLRLAGNL------SLSEVLEDL 463 (607)
T ss_pred eeccccchhhhHHHHHHHhcCceeeeeehhhcCcccccCccCcchHHHHHHHHHHHHHHHHhcCC------CHHHHHHHH
Confidence 5899999999988765 33 789999999998 8899999999999999999999853 454 999999999
Q ss_pred HHhhCCceeeeeeeEec-ChhHHHHHHHHHHHhhcCCCccccccc-Ccccc-ccceeeeccccccC--CCCCCCCCCCeE
Q 027629 75 WATYGRHYYTRYDYENV-DAGAAKELMANLVKMQSSLPEVNDIVK-GICSD-VSKVVNADEFEYKD--PVDGSISKHQGI 149 (221)
Q Consensus 75 ~~~yg~~~~~~~~~~~~-~~~~~~~i~~~l~~~~~~~p~~~~~~~-g~~i~-~~~v~~~~d~~~~d--~~~g~~~~~Dgl 149 (221)
|++||+ +....+|..| +++..+.+++.|+++.. .-.|++.++ ...|. +++++.++|.+..| ++.+.-+.+++|
T Consensus 464 ~e~yg~-~~~~~~y~l~~~pe~~~~lf~~lR~~~~-~~~yp~~ig~e~ev~~~rdlT~g~d~s~~d~ka~lpv~~ss~~v 541 (607)
T KOG1220|consen 464 YERYGY-HSTANSYRLCIDPEVIKALFDGLRNYDT-GYIYPKKIGEEFEVVNVRDLTTGYDVSSPDHKAVLPVSTSSQMV 541 (607)
T ss_pred HHhhCc-cceeeEEEEecCCchhHHHHHHHhhccc-cccccchhcccceeeeeeeceeeeecCCCCCcccccccccccee
Confidence 999996 5555566665 56677888998988754 223566776 33333 66777766666544 333445689999
Q ss_pred EEEEcCCeEEEEecCCCCCCCCeEEEEEEeecCCCCccchhHHHHHHHHHHHHHH
Q 027629 150 RYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVEVALK 204 (221)
Q Consensus 150 ~~~~~dg~wi~vRpSGTEP~~pkiRiY~Ea~~~~~~~~~~~~~e~l~~~~~~~~~ 204 (221)
.+.++++.|+++|.||||| |||+|+|+.....+..-.+....+....+.+.+
T Consensus 542 Tf~~~~~~~~tlR~SgteP---kik~yie~c~~~~~~~~~~l~~~~~~~~~~v~~ 593 (607)
T KOG1220|consen 542 TFTFNNGGVVTLRTSGTEP---KIKLYIEACLPPDAKSWERLIKLANLTTSAVVE 593 (607)
T ss_pred EEeccCcEEEEEecCCCCc---chhhhHHhhCCccccCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 999999999887765432333334444443333
No 21
>PRK14324 glmM phosphoglucosamine mutase; Provisional
Probab=99.92 E-value=5.1e-25 Score=206.58 Aligned_cols=139 Identities=17% Similarity=0.210 Sum_probs=99.2
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYG 79 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg 79 (221)
+++|+||||||+++|.+.+++||||||||++ ++|.+++||++|+++++++++..++ +|++++++++ .|+
T Consensus 303 v~~t~vG~~~i~~~m~~~~~~~ggE~sG~~~~~~~~~~~Dgi~a~l~lle~la~~~~---------~ls~l~~~~~-~~~ 372 (446)
T PRK14324 303 LKRCNVGDKYVLECMKENGINFGGEQSGHIIFSDYAKTGDGLVSALQVSALMLESKK---------KASEALNPFE-LYP 372 (446)
T ss_pred EEEeCChHHHHHHHHHhcCCEEEEcCcccEEecCcCCCCcHHHHHHHHHHHHHHcCC---------CHHHHHHhhh-hcC
Confidence 5799999999999999999999999999998 9999999999999999999998776 9999999864 354
Q ss_pred CceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCCeEE
Q 027629 80 RHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRL 159 (221)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~wi 159 (221)
+.+.++.+...... ...+.+.. .+ ...| +||+|+
T Consensus 373 ---~~~~~~~~~~~~~~-~~~~~~~~--------------------~~----------------~~~~------~dg~~~ 406 (446)
T PRK14324 373 ---QLLVNLKVQEKKPL-EKIKGLKE--------------------LL----------------KELE------KLGIRH 406 (446)
T ss_pred ---ceeEEEeeCCcccc-ccCHHHHH--------------------HH----------------HHHh------cCCcEE
Confidence 34444443111000 00000100 00 0111 667799
Q ss_pred EEecCCCCCCCCeEEEEEEeecCCCCccchhHHHHHHHHHHH
Q 027629 160 VFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVEV 201 (221)
Q Consensus 160 ~vRpSGTEP~~pkiRiY~Ea~~~~~~~~~~~~~e~l~~~~~~ 201 (221)
+|||||||| +||+|+|+.+++.++ +..+++.++++.
T Consensus 407 lvR~SgTEp---~irv~~Ea~~~~~~~---~l~~~~~~~~~~ 442 (446)
T PRK14324 407 LIRYSGTEN---KLRILLEGKDEKLLE---KKMQELVEFFKK 442 (446)
T ss_pred EEecCCCCc---eEEEEEEECCHHHHH---HHHHHHHHHHHH
Confidence 999999999 999999997655432 334444444443
No 22
>PLN02371 phosphoglucosamine mutase family protein
Probab=99.91 E-value=1.5e-24 Score=209.58 Aligned_cols=150 Identities=14% Similarity=0.044 Sum_probs=106.3
Q ss_pred CeEeccchHHHHHhHhcC-----CcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHH
Q 027629 1 MYQVPTGWKFFGNLMDAG-----LCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKH 74 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~-----~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l 74 (221)
+++|+||||||.++|.+. .++||||||||++ +++...+||++++++++++|+.....+. ..+|+++++++
T Consensus 393 v~rt~vG~k~v~~~m~~~~~~~~~~~~ggEeSG~~~~~~~~~~dDg~~a~~~ile~la~~~~~~~----~~~Lsel~~~l 468 (583)
T PLN02371 393 HHRFKRGYKNVIDKGVRLNSDGEETHLMIETSGHGALKENHFLDDGAYLAVKIIIELVRMRAAGA----GGGLGDLIEDL 468 (583)
T ss_pred EEEecCchHHHHHHHHHhhccCCceEEEEcccCeEEECCCCCCCcHHHHHHHHHHHHHHHHhccC----CCCHHHHHHhc
Confidence 579999999999999874 3899999999998 8899999999999999999997632100 02799999997
Q ss_pred HHhhCCceeeeeeeEecChh-HHH---HHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEE
Q 027629 75 WATYGRHYYTRYDYENVDAG-AAK---ELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIR 150 (221)
Q Consensus 75 ~~~yg~~~~~~~~~~~~~~~-~~~---~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~ 150 (221)
++.|.. +..+.++. +++. ... .+++.|.+ ..+ ..+++ ++ .+..+||+|
T Consensus 469 p~~~~~-~~~r~~v~-~~~~~~~~kg~~v~~~l~~---~~~----~~~~~-----~~--------------~~~~~DGvk 520 (583)
T PLN02371 469 EEPLEA-VELRLKIL-DEGKDFKAYGEEVLEHLRN---SIE----SDGKL-----EG--------------APVNYEGVR 520 (583)
T ss_pred hhccCC-ceeeecCC-ccchhHHHHHHHHHHHHHh---hhh----ccccc-----cc--------------CccccceEE
Confidence 766553 33333222 2211 111 35555543 111 11222 10 133689999
Q ss_pred EE----EcCCeEEEEecCCCCCCCCeEEEEEEeecCCCCc
Q 027629 151 YL----FEDGSRLVFRLSGTGSEGATIRLYIEQYEKDPSK 186 (221)
Q Consensus 151 ~~----~~dg~wi~vRpSGTEP~~pkiRiY~Ea~~~~~~~ 186 (221)
+. ++|| |++|||||||| .||+|+|+.+++.++
T Consensus 521 v~~~~~~~~g-WvLiRpS~TEP---~iri~~Ea~s~e~a~ 556 (583)
T PLN02371 521 VSDEGEGFGG-WFLLRQSLHDP---VIPLNIESSSPGGAQ 556 (583)
T ss_pred EEecccCCCc-eEEEEeCCCCc---eEEEEEeECCHHHHH
Confidence 99 7775 99999999999 999999998776543
No 23
>PRK14317 glmM phosphoglucosamine mutase; Provisional
Probab=99.91 E-value=1.2e-24 Score=204.94 Aligned_cols=127 Identities=17% Similarity=0.228 Sum_probs=95.7
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYG 79 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg 79 (221)
+++|+||||||.++|.+.+++||||||||++ ++|.+++||++|+++++++++..++ +|+++++++|..|+
T Consensus 316 v~~t~vG~~~i~~~m~~~~~~~ggE~sg~~~~~~~~~~~Dgi~a~l~ile~la~~~~---------~lsel~~~~~~~~p 386 (465)
T PRK14317 316 LERTAVGDQHVHAAMLETGAMLGGEQSGHILCHHHGLSGDGLLTALHLATLVHQSGV---------SLAELVDQSFQTYP 386 (465)
T ss_pred EEEcCCchHHHHHHHHHcCcEeeccccceEEEeccccCCcHHHHHHHHHHHHHHhCC---------CHHHHHHhHHHhCC
Confidence 4799999999999999999999999999998 9999999999999999999998776 99999999988887
Q ss_pred CceeeeeeeEecChh------HHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEE
Q 027629 80 RHYYTRYDYENVDAG------AAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLF 153 (221)
Q Consensus 80 ~~~~~~~~~~~~~~~------~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~ 153 (221)
+ .+.++.+...+ .+..+++.+. ..| +++.
T Consensus 387 ~---~~~~~~~~~~~~~~~~~~~~~~~~~i~----------------------------------------~~~-~~~~- 421 (465)
T PRK14317 387 Q---KLRNVRVEDRDRRLNWQECEPLQQAIA----------------------------------------QAE-AAMG- 421 (465)
T ss_pred c---eEEEeeccccchhhhhhcChhHHHHHH----------------------------------------HHH-Hhhc-
Confidence 3 22334431111 0011111000 011 1221
Q ss_pred cCCeEEEEecCCCCCCCCeEEEEEEeecCCCC
Q 027629 154 EDGSRLVFRLSGTGSEGATIRLYIEQYEKDPS 185 (221)
Q Consensus 154 ~dg~wi~vRpSGTEP~~pkiRiY~Ea~~~~~~ 185 (221)
+| +|++|||||||| +||+|+|+.+++.+
T Consensus 422 ~~-gW~liRpS~TEP---~irv~~Ea~~~~~~ 449 (465)
T PRK14317 422 DT-GRVLVRASGTEP---LIRVMVEAEDAELV 449 (465)
T ss_pred CC-ceEEEecCCCCC---EEEEEEEeCCHHHH
Confidence 44 599999999999 99999999876543
No 24
>PRK14315 glmM phosphoglucosamine mutase; Provisional
Probab=99.91 E-value=1.1e-24 Score=204.34 Aligned_cols=127 Identities=20% Similarity=0.209 Sum_probs=93.9
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYG 79 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg 79 (221)
+++|+||||||.++|.+.+++||||||||++ ++|.+++||++|+++++++++..++ +|++++++++
T Consensus 304 v~~t~vG~~~i~~~m~~~~~~~ggE~sg~~~f~~~~~~~Dgi~a~l~lle~la~~~~---------~L~~l~~~~~---- 370 (448)
T PRK14315 304 LERTAVGDRYVVEHMREGGFNLGGEQSGHIVLSDYATTGDGLVAALQVLAVVVRSGR---------PASEVCRRFE---- 370 (448)
T ss_pred EEEeCChHHHHHHHHHhCCCceeecccccEeecccCCCCcHHHHHHHHHHHHHHhCC---------CHHHHhhhcC----
Confidence 4799999999999999999999999999998 9999999999999999999997766 9999998753
Q ss_pred CceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCCeEE
Q 027629 80 RHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRL 159 (221)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~wi 159 (221)
.+++...++.+ +. .. .+. .+ .+. ..+||+++.+++++|+
T Consensus 371 ~~~~~~~~~~~-~~-~~--~~~-~~---------------------~~~---------------~~~~~~~~~~~~~gWv 409 (448)
T PRK14315 371 PVPQLLKNVRY-SG-GK--PLE-DA---------------------SVK---------------SAIADAEARLNGSGRL 409 (448)
T ss_pred cCCeeeeEEec-CC-cc--cCC-CH---------------------HHH---------------HHHHHHHHHhcCCcEE
Confidence 22333434553 21 11 100 00 000 0123444444334699
Q ss_pred EEecCCCCCCCCeEEEEEEeecCCC
Q 027629 160 VFRLSGTGSEGATIRLYIEQYEKDP 184 (221)
Q Consensus 160 ~vRpSGTEP~~pkiRiY~Ea~~~~~ 184 (221)
+|||||||| .||+|+|+.+++.
T Consensus 410 LiRpS~teP---~iri~~Ea~s~~~ 431 (448)
T PRK14315 410 LIRPSGTEP---LIRVMAEGDDRAL 431 (448)
T ss_pred EEecCCCCc---EEEEEEeeCCHHH
Confidence 999999999 9999999976544
No 25
>PRK14323 glmM phosphoglucosamine mutase; Provisional
Probab=99.91 E-value=4.1e-24 Score=199.85 Aligned_cols=128 Identities=17% Similarity=0.173 Sum_probs=94.7
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYG 79 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg 79 (221)
+++|+||||||.++|.+.+++||||+|||++ ++|.+++|||+|+++++++++..++ +|++++++++
T Consensus 295 v~~t~vG~~~i~~~m~~~~~~~ggE~sG~~~f~~~~~~~Dgi~a~l~~le~la~~~~---------~ls~l~~~~~---- 361 (440)
T PRK14323 295 FHRTAVGDRYVHEKLHAKGLTLGGEQSGHVLFLDHAPTGDGVLTALLTLAAMKALGT---------DLDAWYDALP---- 361 (440)
T ss_pred EEEeCChHHHHHHHHHhcCCeEEEcCcccEEeCCCCCCCcHHHHHHHHHHHHHHhCC---------CHHHHHHhhh----
Confidence 4799999999999999999999999999998 9999999999999999999998776 9999998864
Q ss_pred CceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCCeEE
Q 027629 80 RHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRL 159 (221)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~wi 159 (221)
.+++.+.++.+ +. +.++++.. . +.. .+ ...+ +.+++++|+
T Consensus 362 ~~~~~~~~v~~-~~--k~~~~~~~-~-----------~~~------~i----------------~~~~---~~~~~~gW~ 401 (440)
T PRK14323 362 MYPQTLLNVRV-SD--KAKVAADP-R-----------VQE------AV----------------REAE---ARLGGRGRV 401 (440)
T ss_pred hcCceeEEEEe-CC--ccchhcCH-H-----------HHH------HH----------------HHHH---hhcCCCeEE
Confidence 23445556664 22 12222110 0 100 00 0111 223234699
Q ss_pred EEecCCCCCCCCeEEEEEEeecCCC
Q 027629 160 VFRLSGTGSEGATIRLYIEQYEKDP 184 (221)
Q Consensus 160 ~vRpSGTEP~~pkiRiY~Ea~~~~~ 184 (221)
+|||||||| .||+|+|+.+++.
T Consensus 402 LvRpS~TEP---~irv~~Ea~s~~~ 423 (440)
T PRK14323 402 NLRPSGTEP---LVRVMVEGPDEAE 423 (440)
T ss_pred EEecCCCcc---EeEEEEeeCCHHH
Confidence 999999999 9999999987554
No 26
>PRK10887 glmM phosphoglucosamine mutase; Provisional
Probab=99.90 E-value=2.8e-24 Score=201.23 Aligned_cols=130 Identities=15% Similarity=0.116 Sum_probs=94.8
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYG 79 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg 79 (221)
+++|+||||||.++|.+.+++||||||||++ ++|.+++|||+++++++++|+..++ +|++++++++
T Consensus 298 v~~t~vG~~~i~~~m~~~~~~~ggE~sg~~~~~~~~~~~Dgi~a~l~ile~la~~~~---------~Ls~l~~~~~---- 364 (443)
T PRK10887 298 FVRAKVGDRYVLEKLQEKGWRLGGENSGHILCLDKTTTGDGIVAALQVLAAMVRSGM---------SLADLCSGMK---- 364 (443)
T ss_pred EEEcCCchHHHHHHHHhcCcEEEEecccceeccCccccCcHHHHHHHHHHHHHHhCC---------CHHHHHhhcc----
Confidence 4799999999999999989999999999998 9999999999999999999997766 9999999864
Q ss_pred CceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCCeEE
Q 027629 80 RHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRL 159 (221)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~wi 159 (221)
.+++.+.++.+..........+.|++. +.. .+ +++. +| +|+
T Consensus 365 ~~~~~~~~v~~~~~~~~~~~~~~~~~~----------~~~--------------------------~~-~~~~-~d-gWv 405 (443)
T PRK10887 365 LFPQVLINVRFKPGADDPLESEAVKAA----------LAE--------------------------VE-AELG-GR-GRV 405 (443)
T ss_pred cccceEEEEEeccccccccchHHHHHH----------HHH--------------------------HH-HHhC-CC-eEE
Confidence 234555566642111001111222211 000 00 1111 34 599
Q ss_pred EEecCCCCCCCCeEEEEEEeecCCCC
Q 027629 160 VFRLSGTGSEGATIRLYIEQYEKDPS 185 (221)
Q Consensus 160 ~vRpSGTEP~~pkiRiY~Ea~~~~~~ 185 (221)
+|||||||| .||+|+|+.+++.+
T Consensus 406 LiRpS~tEP---~iri~~Ea~s~e~a 428 (443)
T PRK10887 406 LLRKSGTEP---LIRVMVEGEDEAQV 428 (443)
T ss_pred EEecCCCCe---EEEEEEeeCCHHHH
Confidence 999999999 99999999876543
No 27
>PRK14320 glmM phosphoglucosamine mutase; Provisional
Probab=99.90 E-value=5.4e-24 Score=199.34 Aligned_cols=129 Identities=17% Similarity=0.191 Sum_probs=94.5
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYG 79 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg 79 (221)
+++|+|||+||.++|.+.+++||||+|||++ ++|.+++|||+|++++|++++..++ +|++++.. +.
T Consensus 298 ~~~t~vG~~~i~~~m~~~~~~~ggE~sG~~~~~~~~~~~Dgi~a~~~lle~la~~~~---------~ls~l~~~----~~ 364 (443)
T PRK14320 298 FIRSKVGDRYVLEDLVKYGYKIGGESSGHVINLNFGTTGDGLFTAIQLLAIFSQADK---------PVSEFKLQ----GE 364 (443)
T ss_pred EEEecCchHHHHHHHHhCCCcEeecCCccEEccCCCCcCCHHHHHHHHHHHHHHcCC---------CHHHHhcc----cc
Confidence 4799999999999999999999999999998 9999999999999999999997766 99999843 23
Q ss_pred CceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCCeEE
Q 027629 80 RHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRL 159 (221)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~wi 159 (221)
++++.+++...... .+.+.++.+.. .++++++.+.+++|+
T Consensus 365 ~~~~~~~~~~~~~~-~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~gW~ 404 (443)
T PRK14320 365 LMQQTLINVPLTKK-VAREDLQKVAS---------------------------------------DVNDVEKRLGNRGRV 404 (443)
T ss_pred cCceEEEEEEecCC-CCcchhHHHHH---------------------------------------HHHHHHhhhCCCceE
Confidence 33555655554221 11112221111 011222333234599
Q ss_pred EEecCCCCCCCCeEEEEEEeecCCCC
Q 027629 160 VFRLSGTGSEGATIRLYIEQYEKDPS 185 (221)
Q Consensus 160 ~vRpSGTEP~~pkiRiY~Ea~~~~~~ 185 (221)
+|||||||| +||+|+|+.+++.+
T Consensus 405 LiRpS~teP---~~rv~~Ea~s~e~a 427 (443)
T PRK14320 405 LLRPSGTEP---VLRVMVEADDKSLA 427 (443)
T ss_pred EEecCCCCc---eEEEEEecCCHHHH
Confidence 999999999 99999999876543
No 28
>TIGR01455 glmM phosphoglucosamine mutase. This model describes GlmM, phosphoglucosamine mutase, also designated in MrsA and YhbF E. coli, UreC in Helicobacter pylori, and femR315 or FemD in Staphlococcus aureus. It converts glucosamine-6-phosphate to glucosamine-1-phosphate as part of the pathway toward UDP-N-acetylglucosamine for peptidoglycan and lipopolysaccharides.
Probab=99.90 E-value=5.6e-24 Score=199.09 Aligned_cols=129 Identities=19% Similarity=0.209 Sum_probs=93.2
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYG 79 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg 79 (221)
+++|+||||||.++|.+.+++||||||||++ ++|.+++||++|+++++++++..++ +|++++++++
T Consensus 300 v~~t~vG~~~i~~~m~~~~~~~ggE~sG~~~~~~~~~~~Dgi~a~l~ile~la~~~~---------~l~~l~~~~~---- 366 (443)
T TIGR01455 300 LIRTAVGDRYVLEEMRESGYNLGGEQSGHIILLDYSTTGDGIVSALQVLTIMKKSGS---------TLSELAAEFV---- 366 (443)
T ss_pred EEEeCChHHHHHHHHHhcCCEEEEcCcceEEecCCCcCCcHHHHHHHHHHHHHHhCC---------CHHHHHhhcc----
Confidence 5799999999999999999999999999998 9999999999999999999997766 9999988753
Q ss_pred CceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCCeEE
Q 027629 80 RHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRL 159 (221)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~wi 159 (221)
.+++.+.+.+......+...++.|+.. +. ..+ .++ .+++|+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~--------------------------~~~-~~~--~~~gW~ 407 (443)
T TIGR01455 367 PYPQTLVNVRVADRKLAAAEAPAVKAA----------IE--------------------------DAE-AEL--GGTGRI 407 (443)
T ss_pred ccCeeeeeEEecccccccccCHHHHHH----------HH--------------------------HHH-HHh--CCCcEE
Confidence 234445555542211111111112110 00 011 122 234599
Q ss_pred EEecCCCCCCCCeEEEEEEeecCCC
Q 027629 160 VFRLSGTGSEGATIRLYIEQYEKDP 184 (221)
Q Consensus 160 ~vRpSGTEP~~pkiRiY~Ea~~~~~ 184 (221)
+|||||||| .||+|+|+.+++.
T Consensus 408 LiRpS~teP---~irv~~Ea~~~e~ 429 (443)
T TIGR01455 408 LLRPSGTEP---LIRVMVEAADEEL 429 (443)
T ss_pred EEecCCCCc---eEEEEEEECCHHH
Confidence 999999999 9999999987544
No 29
>PRK14314 glmM phosphoglucosamine mutase; Provisional
Probab=99.90 E-value=9.2e-24 Score=198.11 Aligned_cols=129 Identities=21% Similarity=0.305 Sum_probs=93.8
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYG 79 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg 79 (221)
+++|+||||||.++|.+.+++||||||||++ ++|.+++||++++++++++++..++ +|+++++++ ..|+
T Consensus 305 v~~t~vG~~~i~~~m~~~~~~~ggE~sg~~~~~~~~~~~Dgi~a~l~~le~la~~~~---------~Ls~l~~~~-~~~p 374 (450)
T PRK14314 305 VLRTPVGDRYVVEEMRRGGANLGGEQSGHLIFLDHNTTGDGILSALQVLRIMIESGK---------PLSELAGLL-EPFP 374 (450)
T ss_pred EEEeCChHHHHHHHHHhcCCEEEEeCcccEEEeCCCCCCcHHHHHHHHHHHHHHhCC---------CHHHHHhhh-hhcC
Confidence 5799999999999999999999999999998 9999999999999999999998776 999999874 3554
Q ss_pred CceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCCeEE
Q 027629 80 RHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRL 159 (221)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~wi 159 (221)
+++ .+..... ..+.+.++.+.. .+|++++.+++++|+
T Consensus 375 ~~~---~~~~~~~-k~~~~~~~~~~~---------------------------------------~i~~v~~~~~~~gWv 411 (450)
T PRK14314 375 QAL---INVRVKE-KIPLETLPEVAK---------------------------------------AIKDVEEALGDSGRV 411 (450)
T ss_pred ccc---eEeEeCC-cCccccHHHHHH---------------------------------------HHHHHHhhhCCCcEE
Confidence 322 2333211 111000111100 122333334234699
Q ss_pred EEecCCCCCCCCeEEEEEEeecCCCC
Q 027629 160 VFRLSGTGSEGATIRLYIEQYEKDPS 185 (221)
Q Consensus 160 ~vRpSGTEP~~pkiRiY~Ea~~~~~~ 185 (221)
+|||||||| .||+|+|+.+++.+
T Consensus 412 LiRpS~tEP---~iri~~Ea~~~~~a 434 (450)
T PRK14314 412 LLRYSGTEN---LCRVMVEGEDKHQV 434 (450)
T ss_pred EEecCCCCc---EEEEEEeeCCHHHH
Confidence 999999999 99999999876543
No 30
>PRK14316 glmM phosphoglucosamine mutase; Provisional
Probab=99.90 E-value=1.2e-23 Score=197.00 Aligned_cols=127 Identities=18% Similarity=0.228 Sum_probs=92.1
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYG 79 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg 79 (221)
+++|+||||||.++|.+.+++||||+|||++ ++|.+++|||+|+++++++++..++ +|+++++++. .|+
T Consensus 301 v~~~~vG~~~i~~~m~~~~~~~ggE~sG~~~f~~~~~~~Dgi~a~l~ile~l~~~~~---------~ls~l~~~~~-~~p 370 (448)
T PRK14316 301 SVKTKVGDRYVVEEMRKGGYNLGGEQSGHIIFLDYNTTGDGLLTALQLAKVMKETGK---------KLSELAAEMK-KYP 370 (448)
T ss_pred EEEeCChHHHHHHHHHhcCCeEEEcCcccEEecccCCCCcHHHHHHHHHHHHHHhCC---------CHHHHHhhhh-hcC
Confidence 4799999999999999999999999999998 9999999999999999999997776 9999998753 344
Q ss_pred CceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEE-cCCeE
Q 027629 80 RHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLF-EDGSR 158 (221)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~-~dg~w 158 (221)
.++ .+..+ .. +..+++. . .+.. .++++++.+ +| +|
T Consensus 371 ~~~---~~~~v-~~--k~~~~~~-~-----------~~~~-------------------------~i~~i~~~~~~~-gw 406 (448)
T PRK14316 371 QKL---VNVRV-TD--KKKAMEN-P-----------EIKE-------------------------IIEKVEEEMAGN-GR 406 (448)
T ss_pred cce---EEeEe-CC--ccccccC-H-----------HHHH-------------------------HHHHHHHHhCCC-ce
Confidence 322 22332 11 1122110 0 0000 011222333 45 59
Q ss_pred EEEecCCCCCCCCeEEEEEEeecCCC
Q 027629 159 LVFRLSGTGSEGATIRLYIEQYEKDP 184 (221)
Q Consensus 159 i~vRpSGTEP~~pkiRiY~Ea~~~~~ 184 (221)
++|||||||| +||+|+|+.+++.
T Consensus 407 ~liRpS~TEP---~irvy~Ea~~~e~ 429 (448)
T PRK14316 407 VLVRPSGTEP---LVRVMAEAPTQEE 429 (448)
T ss_pred EEEecCCCCc---EEEEEEEeCCHHH
Confidence 9999999999 9999999987543
No 31
>PRK14322 glmM phosphoglucosamine mutase; Provisional
Probab=99.89 E-value=4.2e-23 Score=192.63 Aligned_cols=123 Identities=20% Similarity=0.271 Sum_probs=92.9
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYG 79 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg 79 (221)
+++|+|||+||.++|.+.+++||||+|||++ +++.+++||++++++++++++..++ +|++++++++ .|
T Consensus 291 v~~t~vG~~~i~~~m~~~~~~~ggE~sG~~~~~~~~~~~Dgi~a~l~lle~la~~~~---------~Ls~l~~~lp-~~- 359 (429)
T PRK14322 291 LLRTKVGDKYVLEKMLESGANLGGERSGHIIILDRSTTGDGLITALELMRVLKRSGR---------NLSDFAKEIP-DY- 359 (429)
T ss_pred EEEeCCccHHHHHHHhhcCcceeccCCceEEecCCCCCCcHHHHHHHHHHHHHHhCC---------CHHHHHhhch-hc-
Confidence 4799999999999999999999999999998 9999999999999999999998776 9999999864 33
Q ss_pred CceeeeeeeEecCh-hHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCCeE
Q 027629 80 RHYYTRYDYENVDA-GAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSR 158 (221)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~w 158 (221)
++.+.++.+... +.+.+. |+.+. . .. -+||+|
T Consensus 360 --~~~~~~v~~~~~~~~~~~~---~~~~~-----------~-------------------------~~------~~~g~w 392 (429)
T PRK14322 360 --PQITKNVRRTERMSLENEN---LRKIV-----------E-------------------------ES------TSRGYR 392 (429)
T ss_pred --CeeeeEeeeccccccchHH---HHHHH-----------H-------------------------Hh------cCCCcE
Confidence 333334553211 111122 22110 0 00 044679
Q ss_pred EEEecCCCCCCCCeEEEEEEeecCCC
Q 027629 159 LVFRLSGTGSEGATIRLYIEQYEKDP 184 (221)
Q Consensus 159 i~vRpSGTEP~~pkiRiY~Ea~~~~~ 184 (221)
++|||||||| .||+|+|+.+++.
T Consensus 393 ~lvRpS~teP---~irv~~Ea~~~~~ 415 (429)
T PRK14322 393 VVIRPSGTEP---VVRITVEGKDREE 415 (429)
T ss_pred EEEccCCCCc---EEEEEEEECCHHH
Confidence 9999999999 9999999986544
No 32
>cd05802 GlmM GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily. It is required for the interconversion of glucosamine-6-phosphate and glucosamine-1-phosphate in the biosynthetic pathway of UDP-N-acetylglucosamine, an essential precursor to components of the cell envelope. In order to be active, GlmM must be phosphorylated, which can occur via autophosphorylation or by the Ser/Thr kinase StkP. GlmM functions in a classical ping-pong bi-bi mechanism with glucosamine-1,6-diphosphate as an intermediate. Other members of the alpha-D-phosphohexomutase superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=99.89 E-value=9.7e-24 Score=196.90 Aligned_cols=128 Identities=19% Similarity=0.195 Sum_probs=94.9
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYG 79 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg 79 (221)
+++|+||||||.++|.+.+++||||+|||++ ++|.+++|||+++++++++++..++ +|+++++++ +.|+
T Consensus 297 v~~~~~G~~~i~~~~~~~~~~~ggE~sG~~~f~~~~~~~Dgi~a~l~lle~la~~~~---------~ls~l~~~l-~~~~ 366 (434)
T cd05802 297 LVRTKVGDRYVLEEMLKHGANLGGEQSGHIIFLDHSTTGDGLLTALQLLAIMKRSGK---------SLSELASDM-KLYP 366 (434)
T ss_pred EEEEcChHHHHHHHHHhcCCEEEEecCCCEEecCcCCCCcHHHHHHHHHHHHHHhCC---------CHHHHHhhc-cccC
Confidence 4799999999999999999999999999998 9999999999999999999997776 999999986 4443
Q ss_pred CceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCCeEE
Q 027629 80 RHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRL 159 (221)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~wi 159 (221)
+.+.++++.. +.+....+.+.. .+|++++.+++++|+
T Consensus 367 ---~~~~~v~~~~-~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~gW~ 403 (434)
T cd05802 367 ---QVLVNVRVKD-KKALLENPRVQA---------------------------------------AIAEAEKELGGEGRV 403 (434)
T ss_pred ---eeeEEEEeCC-ccccccCHHHHH---------------------------------------HHHHHHHhhCCCeEE
Confidence 4444455321 111000000100 122333444334699
Q ss_pred EEecCCCCCCCCeEEEEEEeecCCC
Q 027629 160 VFRLSGTGSEGATIRLYIEQYEKDP 184 (221)
Q Consensus 160 ~vRpSGTEP~~pkiRiY~Ea~~~~~ 184 (221)
+|||||||| .||+|+|+.+++.
T Consensus 404 liRpS~tep---~irv~~Ea~s~~~ 425 (434)
T cd05802 404 LVRPSGTEP---LIRVMVEGEDEEL 425 (434)
T ss_pred EEecCCCCc---EEEEEEeeCCHHH
Confidence 999999999 9999999987544
No 33
>PRK14319 glmM phosphoglucosamine mutase; Provisional
Probab=99.88 E-value=1.1e-22 Score=189.72 Aligned_cols=123 Identities=20% Similarity=0.188 Sum_probs=92.7
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYG 79 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg 79 (221)
+++|+||||||.++|.+.+++||||+|||++ ++|.+++|||+++++++++++..++ +|++++++++ .|
T Consensus 288 v~~t~~G~~~i~~~m~~~~~~~ggE~sG~~~f~~~~~~~Dgi~a~l~lle~l~~~~~---------~ls~l~~~~p-~~- 356 (430)
T PRK14319 288 VVRTKVGDRYVLEEMLKLNATLGGERSGHIIYLDKSTTGDGLITALETLSVMVKSGK---------KLSDLSNEIP-DY- 356 (430)
T ss_pred EEEeCCchHHHHHHHHHcCCEEEEcccceEEEhhccCCCcHHHHHHHHHHHHHHhCC---------CHHHHHhhcc-cc-
Confidence 5799999999999999999999999999998 9999999999999999999998876 9999998754 33
Q ss_pred CceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCCeEE
Q 027629 80 RHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRL 159 (221)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~wi 159 (221)
++.+.++.+.+. . +.+ .+ .+.. .+|++ +|| |+
T Consensus 357 --~~~~~~v~~k~~--~--~~~-~~-----------~~~~-------------------------~~~~~----~~g-w~ 388 (430)
T PRK14319 357 --PQVMINVKVKNK--E--VYK-HK-----------EVFK-------------------------LIKSI----KDY-RV 388 (430)
T ss_pred --ceeeEEEEeCCc--c--ccc-cH-----------HHHH-------------------------HHhCC----CCe-EE
Confidence 344444443221 0 110 00 0000 12342 454 99
Q ss_pred EEecCCCCCCCCeEEEEEEeecCCCC
Q 027629 160 VFRLSGTGSEGATIRLYIEQYEKDPS 185 (221)
Q Consensus 160 ~vRpSGTEP~~pkiRiY~Ea~~~~~~ 185 (221)
+|||||||| ++|+|+|+.+++.+
T Consensus 389 LiRpS~TeP---~irv~~Ea~~~~~a 411 (430)
T PRK14319 389 IVRPSGTEP---VVRVLVEGPDEEYI 411 (430)
T ss_pred EEecCCCcc---EEEEEEEeCCHHHH
Confidence 999999999 99999999876543
No 34
>cd03086 PGM3 PGM3 (phosphoglucomutase 3), also known as PAGM (phosphoacetylglucosamine mutase) and AGM1 (N-acetylglucosamine-phosphate mutase), is an essential enzyme found in eukaryotes that reversibly catalyzes the conversion of GlcNAc-6-phosphate into GlcNAc-1-phosphate as part of the UDP-N-acetylglucosamine (UDP-GlcNAc) biosynthetic pathway. UDP-GlcNAc is an essential metabolite that serves as the biosynthetic precursor of many glycoproteins and mucopolysaccharides. AGM1 is a member of the alpha-D-phosphohexomutase superfamily, which catalyzes the intramolecular phosphoryl transfer of sugar substrates. The alpha-D-phosphohexomutases have four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=99.88 E-value=6e-23 Score=195.91 Aligned_cols=136 Identities=20% Similarity=0.155 Sum_probs=99.6
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCC--cc-CCC------------------------------CCCCcHHHHHHHH
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFG--TG-SDH------------------------------IREKDGIWAVLAW 47 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG--~~-~~~------------------------------~~dkDGi~aal~~ 47 (221)
+++|+||||||.++|++.++.+|||+||| ++ +++ ...+|||++++++
T Consensus 333 ~~~t~vG~k~v~~~m~e~~~~~ggE~sGHgtvif~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~n~~~gDgi~~al~v 412 (513)
T cd03086 333 VVCTPTGVKHLHHAAEEFDIGVYFEANGHGTVLFSESALAKIEENSSLSDEQEKAAKTLLAFSRLINQTVGDAISDMLAV 412 (513)
T ss_pred EEEeCCcHHHHHHHHHHhCcceEEeccCCEEEEECchHHhhhhhhccccchhhhHHHHHHHHHHhhCCCCcHHHHHHHHH
Confidence 47999999999999999999999999999 87 888 5589999999999
Q ss_pred HHHHHHhcccCCCCCCccCHHHHHHHHHHhhCCceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccce
Q 027629 48 LSILAHKNKENLDGGKLVTVEDIVRKHWATYGRHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKV 127 (221)
Q Consensus 48 lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v 127 (221)
+++++..++ +|+|+++. |..|+ ....++.+.+ ..+..+.+. ++.. -.| . .+
T Consensus 413 l~~l~~~~~---------~lsel~~~-y~~~p---~~~~~v~v~~-~~~~~~~~~-e~~~-~~p-------~------~l 463 (513)
T cd03086 413 ELILAALGW---------SPQDWDNL-YTDLP---NRQLKVKVPD-RSVIKTTDA-ERRL-VEP-------K------GL 463 (513)
T ss_pred HHHHHHhCC---------CHHHHHhh-chhcC---eeeeEEEecC-ccchhhhhH-Hhhc-ccc-------H------HH
Confidence 999998776 99998886 44554 3333444322 111112211 1100 000 0 01
Q ss_pred eeeccccccCCCCCCCCCCCeEEEEEcCCeEEEEecCCCCCCCCeEEEEEEeecCCC
Q 027629 128 VNADEFEYKDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDP 184 (221)
Q Consensus 128 ~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~wi~vRpSGTEP~~pkiRiY~Ea~~~~~ 184 (221)
+.++||+++.++|| |++|||||||| +||+|+|+.+++.
T Consensus 464 ---------------~~~iDG~~~~~~~g-r~lVRpSGTEp---~iRvyaEA~t~~~ 501 (513)
T cd03086 464 ---------------QDKIDAIVAKYNNG-RAFVRPSGTED---VVRVYAEAATQEE 501 (513)
T ss_pred ---------------HHHHHHHHhcCCCe-eEEEecCCCCc---EEEEEEEeCCHHH
Confidence 23688999999885 99999999999 9999999976543
No 35
>PRK14318 glmM phosphoglucosamine mutase; Provisional
Probab=99.88 E-value=1.2e-22 Score=190.42 Aligned_cols=129 Identities=20% Similarity=0.299 Sum_probs=92.0
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhC
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYG 79 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg 79 (221)
+++|+||||||.++|.+.+++||||+|||++ ++|.+++|||+|+++++++|+..++ +|+++++++ ..++
T Consensus 303 v~~t~vG~~~i~~~~~~~~~~~ggE~sG~~~~~~~~~~~Dgi~a~l~ile~la~~~~---------~ls~l~~~~-~~~p 372 (448)
T PRK14318 303 VVTTAVGDRYVLEEMRAGGYSLGGEQSGHIVMPDHATTGDGILTGLRLMARMAQTGK---------SLAELASAM-TVLP 372 (448)
T ss_pred EEEeCChHHHHHHHHHhcCcEEEEcCcCcEEecCCCCCCCHHHHHHHHHHHHHHhCC---------CHHHHHhhh-hhcC
Confidence 4799999999999999989999999999998 9999999999999999999997776 999999875 3444
Q ss_pred CceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCCeEE
Q 027629 80 RHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRL 159 (221)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~wi 159 (221)
+++ .+.+... +.+++. ...+. .+. + ..| + .+++++|+
T Consensus 373 ~~~---~~~~~~~---~~~~~~-~~~~~----------~~i-----~------------------~~~-~--~~~~~gw~ 409 (448)
T PRK14318 373 QVL---INVPVVD---KTTAAT-APSVR----------AAV-----A------------------RAE-A--ELGDTGRV 409 (448)
T ss_pred cce---eeeecCC---ccchhc-cHHHH----------HHH-----H------------------HHH-h--hhcCCeEE
Confidence 322 1233211 111211 00100 010 0 011 1 12134599
Q ss_pred EEecCCCCCCCCeEEEEEEeecCCCC
Q 027629 160 VFRLSGTGSEGATIRLYIEQYEKDPS 185 (221)
Q Consensus 160 ~vRpSGTEP~~pkiRiY~Ea~~~~~~ 185 (221)
+|||||||| .||+|+|+.+++.+
T Consensus 410 lvRpS~teP---~irv~~Ea~~~~~a 432 (448)
T PRK14318 410 LLRPSGTEP---LVRVMVEAADEETA 432 (448)
T ss_pred EEeeCCCCc---EEEEEEeECCHHHH
Confidence 999999999 99999999876543
No 36
>cd03084 phosphohexomutase The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this family include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). These enzymes play important and diverse roles in carbohydrate metabolism in organisms from bacteria to humans. Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=99.87 E-value=4.7e-22 Score=180.96 Aligned_cols=66 Identities=32% Similarity=0.441 Sum_probs=62.1
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHH
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHW 75 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~ 75 (221)
+++|+||||||.++|.+.+++||||+|||++ ++|.+++|||+++++++++++..++ +|++++++++
T Consensus 242 v~~t~~G~~~i~~~m~~~~~~~ggE~sg~~~~~~~~~~~Dgi~a~l~~le~la~~~~---------~Ls~l~~~~p 308 (355)
T cd03084 242 VIRTKTGFKWVGEAMQEGDVVLGGEESGGVIFPEFHPGRDGISAALLLLEILANLGK---------SLSELFSELP 308 (355)
T ss_pred EEEecCcHHHHHHHHHhcCceEEecCcCCEEECCcCCCCCHHHHHHHHHHHHHHhCC---------CHHHHHHHhh
Confidence 5799999999999999999999999999998 9999999999999999999998776 9999999865
No 37
>PTZ00302 N-acetylglucosamine-phosphate mutase; Provisional
Probab=99.79 E-value=2.8e-19 Score=172.72 Aligned_cols=130 Identities=20% Similarity=0.155 Sum_probs=91.3
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCC--cc-CC------------------------------CCCCCcHHHHHHHH
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFG--TG-SD------------------------------HIREKDGIWAVLAW 47 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG--~~-~~------------------------------~~~dkDGi~aal~~ 47 (221)
|++||||.||+.++|.+.++.+|||.||| ++ ++ +....|||++++++
T Consensus 397 v~~t~tGvk~l~~~a~e~di~iyfEaNGHGTvif~~~~~~~~~~~~~~~~~~~~a~~~L~~~~~l~n~~vGDai~~~L~v 476 (585)
T PTZ00302 397 VYCAPTGVKNLHPKAHKYDIGIYFEANGHGTVLFNEKALAEWAKFLAKQNALNSACRQLEKFLRLFNQTIGDAISDLLAV 476 (585)
T ss_pred EEEEeCchHHHHHHHHhcCCeEEEccCCCEEEEECcHHHhhhhhhccccchhhhHHHHHHHhHhhhcCCCccHHHHHHHH
Confidence 57899999999999999999999999999 77 77 66779999999999
Q ss_pred HHHHHHhcccCCCCCCccCHHHHHHHHHHhhCCceeeeeeeEecCh-----hHHHH-HHHHHHHhhcCCCcccccccCcc
Q 027629 48 LSILAHKNKENLDGGKLVTVEDIVRKHWATYGRHYYTRYDYENVDA-----GAAKE-LMANLVKMQSSLPEVNDIVKGIC 121 (221)
Q Consensus 48 lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg~~~~~~~~~~~~~~-----~~~~~-i~~~l~~~~~~~p~~~~~~~g~~ 121 (221)
++++++.+. +++|+++. |..++. ...++.+.+. ...++ +. .|+ .+..
T Consensus 477 ~~iL~~~~~---------sl~e~~~~-y~dlP~---~~~kv~v~~r~~i~t~d~e~~~v--------~P~----~Lq~-- 529 (585)
T PTZ00302 477 ELALAFLGL---------SFQDWLNL-YTDLPS---RQDKVTVKDRTLITNTEDETRLL--------EPK----GLQD-- 529 (585)
T ss_pred HHHHHhhCC---------CHHHHHhh-cccCCc---eeeeeEeccCcccccchHhhhcc--------cHH----HHHH--
Confidence 999998876 99998874 555553 2222332111 00100 00 000 0100
Q ss_pred ccccceeeeccccccCCCCCCCCCCCeEEEEE-cCCeEEEEecCCCCCCCCeEEEEEEeecCCC
Q 027629 122 SDVSKVVNADEFEYKDPVDGSISKHQGIRYLF-EDGSRLVFRLSGTGSEGATIRLYIEQYEKDP 184 (221)
Q Consensus 122 i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~-~dg~wi~vRpSGTEP~~pkiRiY~Ea~~~~~ 184 (221)
.+|++...+ ++| |++|||||||| .||+|+|+.+++.
T Consensus 530 -----------------------~id~~~~~~~~~g-r~lvRpSGTEp---~vRvyaEA~t~~~ 566 (585)
T PTZ00302 530 -----------------------KIDAIVSKYDNAA-RAFIRPSGTEP---VVRVYAEAPTLEQ 566 (585)
T ss_pred -----------------------HHHHHHhhccCCc-eEEEEcCCCCc---EEEEEEEECCHHH
Confidence 123333356 554 99999999999 9999999976543
No 38
>PF02880 PGM_PMM_III: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; InterPro: IPR005846 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) []. PGM (5.4.2.2 from EC) converts D-glucose 1-phosphate into D-glucose 6-phosphate, and participates in both the breakdown and synthesis of glucose []. PGM/PMM (5.4.2.2 from EC; 5.4.2.8 from EC) are primarily bacterial enzymes that use either glucose or mannose as substrate, participating in the biosynthesis of a variety of carbohydrates such as lipopolysaccharides and alginate [, ]. Both PNGM (5.4.2.3 from EC) and PAGM (5.4.2.10 from EC) are involved in the biosynthesis of UDP-N-acetylglucosamine [, ]. Despite differences in substrate specificity, these enzymes share a similar catalytic mechanism, converting 1-phospho-sugars to 6-phospho-sugars via a biphosphorylated 1,6-phospho-sugar. The active enzyme is phosphorylated at a conserved serine residue and binds one magnesium ion; residues around the active site serine are well conserved among family members. The reaction mechanism involves phosphoryl transfer from the phosphoserine to the substrate to create a biophosphorylated sugar, followed by a phosphoryl transfer from the substrate back to the enzyme []. The structures of PGM and PGM/PMM have been determined, and were found to be very similar in topology. These enzymes are both composed of four domains and a large central active site cleft, where each domain contains residues essential for catalysis and/or substrate recognition. Domain I contains the catalytic phosphoserine, domain II contains a metal-binding loop to coordinate the magnesium ion, domain III contains the sugar-binding loop that recognises the two different binding orientations of the 1- and 6-phospho-sugars, and domain IV contains a phosphate-binding site required for orienting the incoming phospho-sugar substrate. This entry represents domain III found in alpha-D-phosphohexomutase enzymes. This domain has a 3-layer alpha/beta/alpha topology.; GO: 0016868 intramolecular transferase activity, phosphotransferases, 0005975 carbohydrate metabolic process; PDB: 1C47_A 1VKL_B 1LXT_A 1JDY_B 3PMG_A 1C4G_B 3UW2_A 2F7L_B 3I3W_B 2Z0F_A ....
Probab=99.78 E-value=2.4e-19 Score=138.98 Aligned_cols=69 Identities=30% Similarity=0.412 Sum_probs=63.8
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCCcc-CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhh
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATY 78 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~-~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~y 78 (221)
+++|+||||||+++|++.+++||||||||++ +++.++||||+++++++++++..++ ||+++++++|++|
T Consensus 44 ~~~t~vG~~~i~~~~~~~~~~~ggE~sgg~~~~~~~~~~Dgi~a~~~~l~~l~~~~~---------~ls~ll~~l~~~Y 113 (113)
T PF02880_consen 44 VIRTKVGFKNIAEKMREENAVFGGEESGGFIFPDFSYDKDGIYAALLLLELLAEEGK---------TLSELLDELPKKY 113 (113)
T ss_dssp EEEESSSHHHHHHHHHHTTESEEEETTSEEEETTTESSE-HHHHHHHHHHHHHHHTS----------HHHHHHHHHHHH
T ss_pred EEEecCCcHHHHHHHhhhceeEEecccCeEEecCCCCCCcHHHHHHHHHHHHHHhCC---------CHHHHHHHHhccC
Confidence 4799999999999999999999999999998 9999999999999999999998776 9999999999987
No 39
>PLN02895 phosphoacetylglucosamine mutase
Probab=99.77 E-value=6.7e-19 Score=169.22 Aligned_cols=129 Identities=17% Similarity=0.176 Sum_probs=90.7
Q ss_pred CeEeccchHHHHHhHhcCCcEEEeccCCC--cc-CCCCC------------------------------------CCcHH
Q 027629 1 MYQVPTGWKFFGNLMDAGLCSICGEESFG--TG-SDHIR------------------------------------EKDGI 41 (221)
Q Consensus 1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG--~~-~~~~~------------------------------------dkDGi 41 (221)
+++|+||.||+.++|++.++.+|||.||| ++ +++.. ..|||
T Consensus 365 v~~t~tGvk~l~~~a~e~digvyfEaNGHGTviFs~~~~~~~~~~~~~~~~~~~~~~~~~a~~~L~~~~~linq~vGDai 444 (562)
T PLN02895 365 VVCTPTGVKYLHEAAAEFDIGVYFEANGHGTVLFSERFLDWLEAAAAELSSKAKGSEAHKAARRLLAVSRLINQAVGDAL 444 (562)
T ss_pred EEEEeCchHHHHHHHHhcCceEEEccCCCeEEEEChHHHHHHhhhhhccccccccchhhHHHHHHHHHHHhhcCCccHHH
Confidence 47899999999999999999999999999 77 77655 68999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhCCceeeeeeeEecCh-----hHHHHHHHHHHHhhcCCCccccc
Q 027629 42 WAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYGRHYYTRYDYENVDA-----GAAKELMANLVKMQSSLPEVNDI 116 (221)
Q Consensus 42 ~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg~~~~~~~~~~~~~~-----~~~~~i~~~l~~~~~~~p~~~~~ 116 (221)
+++++++++|++.+. +++++++. |..++. ...++.+.+. ...++ .+ -. |. .
T Consensus 445 ~~~L~vl~iL~~~~~---------sl~e~~~~-y~dlP~---~~~kv~V~dr~~~~t~~~e~------~~-v~-P~---~ 500 (562)
T PLN02895 445 SGLLLVEAILQYRGW---------SLAEWNAL-YQDLPS---RQLKVKVADRTAITTTDAET------VV-VR-PA---G 500 (562)
T ss_pred HHHHHHHHHHHHhCC---------CHHHHHhh-CccCCc---eeEeeEEccCccccccchhh------hc-cc-HH---H
Confidence 999999999998876 99998884 555553 2222332111 00000 00 00 00 0
Q ss_pred ccCccccccceeeeccccccCCCCCCCCCCCeEEE-EEcCCeEEEEecCCCCCCCCeEEEEEEeecCC
Q 027629 117 VKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRY-LFEDGSRLVFRLSGTGSEGATIRLYIEQYEKD 183 (221)
Q Consensus 117 ~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~-~~~dg~wi~vRpSGTEP~~pkiRiY~Ea~~~~ 183 (221)
+ ...+| .++ .+++| |++|||||||| .||+|+|+.+.+
T Consensus 501 L-------------------------q~~ID-~~v~~~~~G-r~lvRpSGTEp---~vRv~~Ea~t~~ 538 (562)
T PLN02895 501 L-------------------------QDAID-AEVAKYPRG-RAFVRPSGTED---VVRVYAEASTQE 538 (562)
T ss_pred H-------------------------HHHHH-HHhcccCCc-eEEEEcCCCCc---EEEEEEEECCHH
Confidence 0 11344 344 56776 99999999999 999999997543
No 40
>PF00408 PGM_PMM_IV: Phosphoglucomutase/phosphomannomutase, C-terminal domain; InterPro: IPR005843 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) []. PGM (5.4.2.2 from EC) converts D-glucose 1-phosphate into D-glucose 6-phosphate, and participates in both the breakdown and synthesis of glucose []. PGM/PMM (5.4.2.2 from EC; 5.4.2.8 from EC) are primarily bacterial enzymes that use either glucose or mannose as substrate, participating in the biosynthesis of a variety of carbohydrates such as lipopolysaccharides and alginate [, ]. Both PNGM (5.4.2.3 from EC) and PAGM (5.4.2.10 from EC) are involved in the biosynthesis of UDP-N-acetylglucosamine [, ]. Despite differences in substrate specificity, these enzymes share a similar catalytic mechanism, converting 1-phospho-sugars to 6-phospho-sugars via a biphosphorylated 1,6-phospho-sugar. The active enzyme is phosphorylated at a conserved serine residue and binds one magnesium ion; residues around the active site serine are well conserved among family members. The reaction mechanism involves phosphoryl transfer from the phosphoserine to the substrate to create a biophosphorylated sugar, followed by a phosphoryl transfer from the substrate back to the enzyme []. The structures of PGM and PGM/PMM have been determined, and were found to be very similar in topology. These enzymes are both composed of four domains and a large central active site cleft, where each domain contains residues essential for catalysis and/or substrate recognition. Domain I contains the catalytic phosphoserine, domain II contains a metal-binding loop to coordinate the magnesium ion, domain III contains the sugar-binding loop that recognises the two different binding orientations of the 1- and 6-phospho-sugars, and domain IV contains a phosphate-binding site required for orienting the incoming phospho-sugar substrate. This entry represents the C-terminal domain alpha-D-phosphohexomutase enzymes.; GO: 0016868 intramolecular transferase activity, phosphotransferases, 0005975 carbohydrate metabolic process; PDB: 1KFQ_B 1KFI_A 3PDK_B 2F7L_A 1TUO_A 2FKM_X 3C04_A 1K2Y_X 1P5G_X 2H4L_X ....
Probab=99.43 E-value=5.2e-14 Score=101.19 Aligned_cols=35 Identities=49% Similarity=0.796 Sum_probs=31.6
Q ss_pred CCCeEEEEEcCCeEEEEecCCCCCCCCeEEEEEEeecC
Q 027629 145 KHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEK 182 (221)
Q Consensus 145 ~~Dgl~~~~~dg~wi~vRpSGTEP~~pkiRiY~Ea~~~ 182 (221)
..||+++.++||+|++|||||||| +||+|+|+.+.
T Consensus 24 ~~~~~~~~~~dG~~l~vR~SgTEP---~iRv~~Ea~~~ 58 (73)
T PF00408_consen 24 TIDGIKILFEDGWRLLVRPSGTEP---KIRVYVEAPDE 58 (73)
T ss_dssp HHHCEEEEETTEEEEEEEEESSSS---EEEEEEEESSH
T ss_pred ccceEEEECCCceEEEEECCCCCc---eEEEEEEeCCH
Confidence 468999999999777799999999 99999999853
No 41
>KOG2537 consensus Phosphoglucomutase/phosphomannomutase [Carbohydrate transport and metabolism]
Probab=97.31 E-value=0.00057 Score=65.21 Aligned_cols=40 Identities=30% Similarity=0.456 Sum_probs=29.6
Q ss_pred EcCCeEEEEecCCCCCCCCeEEEEEEeecCCCCccchhHHHHHHHHH
Q 027629 153 FEDGSRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLV 199 (221)
Q Consensus 153 ~~dg~wi~vRpSGTEP~~pkiRiY~Ea~~~~~~~~~~~~~e~l~~~~ 199 (221)
+.. ++-.+||||||. .+|+|+|+.+++.++ +...++.+++
T Consensus 496 y~~-gRaFvR~SGTEd---vVRVYAEa~t~~~~d---~l~~~v~~~v 535 (539)
T KOG2537|consen 496 YKR-GRSFVRPSGTED---VVRVYAEASTKEDAD---QLALEVAQLV 535 (539)
T ss_pred ccC-CceEEeccCccc---eEEEEEecCchhhHH---HHHHHHHHHH
Confidence 344 488999999999 999999999876554 3444554444
No 42
>COG0033 Pgm Phosphoglucomutase [Carbohydrate transport and metabolism]
Probab=69.04 E-value=6.6 Score=37.79 Aligned_cols=50 Identities=26% Similarity=0.236 Sum_probs=44.7
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhCCceeeeeeeEe
Q 027629 32 SDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYGRHYYTRYDYEN 90 (221)
Q Consensus 32 ~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg~~~~~~~~~~~ 90 (221)
+.|..+|||++-|++-+|+.+..++ ...+.-+++-++||+|.|.|++-+.
T Consensus 380 g~Wa~~~~~~Ilall~aei~a~t~~---------~~~~~y~~~~r~~~~~~Yervda~a 429 (524)
T COG0033 380 GVWATDKDGNILALLAAEITAVTGK---------IPQEHYAELGRNFGRPDYERVDAEA 429 (524)
T ss_pred CceeeechhHHHHHHhhhchhhhcc---------CHHHHHHHHHHHhCcccHHHhcCch
Confidence 3578899999999999999998887 8899999999999999999987664
No 43
>COG0124 HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=40.95 E-value=11 Score=35.84 Aligned_cols=61 Identities=18% Similarity=0.171 Sum_probs=40.2
Q ss_pred eEEEEEcCCeEEEEecCCCCCCCCeEEEEEEeecCCC----------------Cc-----------------cchhHHHH
Q 027629 148 GIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDP----------------SK-----------------TGRDSQEA 194 (221)
Q Consensus 148 gl~~~~~dg~wi~vRpSGTEP~~pkiRiY~Ea~~~~~----------------~~-----------------~~~~~~e~ 194 (221)
+..|.=.+|.|+.+||=+|-| .+|.|+|-...-. .+ ....+-.+
T Consensus 66 mY~F~Dkggr~laLRpe~Tap---v~R~~~en~~~~~~p~k~yy~g~vfRyErPQ~GR~RqF~Q~g~E~iG~~~~~~DAE 142 (429)
T COG0124 66 MYTFKDKGGRSLALRPELTAP---VARAVAENKLDLPKPLKLYYFGPVFRYERPQKGRYRQFYQFGVEVIGSDSPDADAE 142 (429)
T ss_pred eEEEEeCCCCEEEecccCcHH---HHHHHHhccccccCCeeEEEecceecCCCCCCCCceeeEEcCeEEeCCCCcccCHH
Confidence 445554457899999999998 8877776432211 00 01134467
Q ss_pred HHHHHHHHHHhcCCcch
Q 027629 195 LAPLVEVALKLSKMEQF 211 (221)
Q Consensus 195 l~~~~~~~~~~~~~~~~ 211 (221)
+-.++...++.+|+.+|
T Consensus 143 vi~l~~~~l~~lGi~~~ 159 (429)
T COG0124 143 VIALAVEILEALGIGGF 159 (429)
T ss_pred HHHHHHHHHHHcCCCcE
Confidence 77788888888888764
No 44
>PF06799 DUF1230: Protein of unknown function (DUF1230); InterPro: IPR009631 This family represents Ycf36, which is found in plants, encoded in the genomes of algal chloroplasts and in cyanobacteria. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=34.29 E-value=21 Score=29.17 Aligned_cols=39 Identities=18% Similarity=0.253 Sum_probs=25.8
Q ss_pred ccchHHHHHhHhcCCcEEEeccCCCcc------CCCCCCCcHHHHHH
Q 027629 5 PTGWKFFGNLMDAGLCSICGEESFGTG------SDHIREKDGIWAVL 45 (221)
Q Consensus 5 ~tGfk~I~~~m~~~~~~~GgEESgG~~------~~~~~dkDGi~aal 45 (221)
--||.||.+.+. ...+-|||||=|= ++-++.+|=+++.-
T Consensus 84 yLGW~YV~~RL~--s~tV~YEESGWYDGQ~W~Kp~e~l~rDrLi~~y 128 (144)
T PF06799_consen 84 YLGWSYVGDRLL--SATVEYEESGWYDGQVWVKPPEVLARDRLIGSY 128 (144)
T ss_pred HhChHHHHhhhc--cCcccccccCccCCccccCCHHHHHHHHHHhhh
Confidence 359999999884 4557899999762 33344555544433
No 45
>COG1965 CyaY Protein implicated in iron transport, frataxin homolog [Inorganic ion transport and metabolism]
Probab=33.16 E-value=37 Score=26.32 Aligned_cols=23 Identities=30% Similarity=0.521 Sum_probs=18.8
Q ss_pred CCCCeEEEEEcCCeEEEEecCCCC
Q 027629 144 SKHQGIRYLFEDGSRLVFRLSGTG 167 (221)
Q Consensus 144 ~~~Dgl~~~~~dg~wi~vRpSGTE 167 (221)
+++.|..|.+.+|.|+.-| ||++
T Consensus 64 s~~gG~HF~y~~g~W~~~r-sg~~ 86 (106)
T COG1965 64 SKVGGYHFDYKNGEWISTR-SGEE 86 (106)
T ss_pred ccCCCceeEeeCCEEEECC-CCCc
Confidence 4677889999999998766 8887
No 46
>cd04931 ACT_PAH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe. In PAH, an autoregulatory sequence, N-terminal of the ACT domain, extends across the catalytic domain active site and regulates the enzyme by intrasteric regulation. It appears that the activation by L-Phe induces a conformational change that converts the enzyme to a high-affinity and high-activity state. Modulation of activity is achieved through inhibition by BH4 and activation by phosphorylation of serine residues of the autoregulatory region. The molecular basis for the cooperative activation process is not fully understood yet. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=32.22 E-value=1.2e+02 Score=22.38 Aligned_cols=23 Identities=17% Similarity=0.187 Sum_probs=18.5
Q ss_pred EEEEecCCCCCCCCeEEEEEEeecC
Q 027629 158 RLVFRLSGTGSEGATIRLYIEQYEK 182 (221)
Q Consensus 158 wi~vRpSGTEP~~pkiRiY~Ea~~~ 182 (221)
+|-=|||.+.+ ....+|+|....
T Consensus 44 ~IeSRP~~~~~--~~Y~FfVDieg~ 66 (90)
T cd04931 44 HIESRPSRLNK--DEYEFFINLDKK 66 (90)
T ss_pred EEEeccCCCCC--ceEEEEEEEEcC
Confidence 45569999987 689999998764
No 47
>PF15025 DUF4524: Domain of unknown function (DUF4524)
Probab=30.43 E-value=53 Score=26.90 Aligned_cols=22 Identities=32% Similarity=0.557 Sum_probs=19.9
Q ss_pred CCeEEEEEcCCeEEEEecCCCC
Q 027629 146 HQGIRYLFEDGSRLVFRLSGTG 167 (221)
Q Consensus 146 ~Dgl~~~~~dg~wi~vRpSGTE 167 (221)
-|-++..|.||+.+.+.|+|.|
T Consensus 7 Ddsv~v~f~Dgs~l~LspcGs~ 28 (148)
T PF15025_consen 7 DDSVEVRFSDGSRLQLSPCGSE 28 (148)
T ss_pred CCeEEEEEcCCCEEEEcCCCcc
Confidence 3568899999999999999999
No 48
>PF09960 DUF2194: Uncharacterized protein conserved in bacteria (DUF2194); InterPro: IPR018695 This family of prokaryotic proteins has no known function; however it may be a membrane protein.
Probab=29.72 E-value=1.8e+02 Score=28.93 Aligned_cols=23 Identities=13% Similarity=0.166 Sum_probs=15.9
Q ss_pred CCeEEEEEc---CCeEEEEecCCCCC
Q 027629 146 HQGIRYLFE---DGSRLVFRLSGTGS 168 (221)
Q Consensus 146 ~Dgl~~~~~---dg~wi~vRpSGTEP 168 (221)
-|.|.+.+. +..|..+|.+..+|
T Consensus 544 ~~~i~i~~~~~~~~~~~~lr~~~~~~ 569 (585)
T PF09960_consen 544 DNSITIYLGNFSDEPYYFLRTNKGPP 569 (585)
T ss_pred CCeEEEEeCCcCCCcEEEEEecCCCe
Confidence 346666654 45789999887775
No 49
>COG3721 HugX Putative heme iron utilization protein [Inorganic ion transport and metabolism]
Probab=29.48 E-value=1.9e+02 Score=24.09 Aligned_cols=32 Identities=16% Similarity=0.044 Sum_probs=21.3
Q ss_pred CHHHHHHHHHHhhCCceeeeeeeEecChhHHHHHHHHHHHh
Q 027629 66 TVEDIVRKHWATYGRHYYTRYDYENVDAGAAKELMANLVKM 106 (221)
Q Consensus 66 tL~ell~~l~~~yg~~~~~~~~~~~~~~~~~~~i~~~l~~~ 106 (221)
+..|+|..|++.+ ...++.+..+.|.+.|..+
T Consensus 40 ~~~eIv~aLP~~~---------v~vvpgdrfd~iw~~m~eW 71 (176)
T COG3721 40 TELEIVRALPEEA---------VVVVPGDRFDTIWDEMCEW 71 (176)
T ss_pred CHHHHHHhCchhh---------eeecchHHHHHHHHHhhcc
Confidence 8888888886542 2234666777777766554
No 50
>cd04880 ACT_AAAH-PDT-like ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH). ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH): Phenylalanine hydroxylases (PAH), tyrosine hydroxylases (TH) and tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. This family of enzymes shares a common catalytic mechanism, in which dioxygen is used by an active site containing a single, reduced iron atom to hydroxylate an unactivated aromatic substrate, concomitant with a two-electron oxidation of tetrahydropterin (BH4) cofactor to its quinonoid dihydropterin form. Eukaryotic AAAHs have an N-terminal ACT (regulatory) domain, a middle catalytic domain and a C-terminal domain which is responsible for the oligomeric state of the enzyme forming a domain-swapped tetrameric coiled-coil. The PAH, TH, and TPH enzymes contain highly conserved catalytic domains but distinct N-terminal ACT domains and differ in their mech
Probab=26.96 E-value=1.9e+02 Score=19.61 Aligned_cols=23 Identities=13% Similarity=0.182 Sum_probs=17.8
Q ss_pred EEEEecCCCCCCCCeEEEEEEeecC
Q 027629 158 RLVFRLSGTGSEGATIRLYIEQYEK 182 (221)
Q Consensus 158 wi~vRpSGTEP~~pkiRiY~Ea~~~ 182 (221)
++.=||+..++ ....+|++....
T Consensus 29 ~I~Srp~~~~~--~~~~f~id~~~~ 51 (75)
T cd04880 29 KIESRPSRKGL--WEYEFFVDFEGH 51 (75)
T ss_pred EEEeeecCCCC--ceEEEEEEEECC
Confidence 34458998866 699999998864
No 51
>PF14085 DUF4265: Domain of unknown function (DUF4265)
Probab=25.56 E-value=2.4e+02 Score=21.72 Aligned_cols=36 Identities=25% Similarity=0.300 Sum_probs=26.2
Q ss_pred CCCCCeEEEEEcCCeEE---EEecCCCCCCCCeEEEEEEeecC
Q 027629 143 ISKHQGIRYLFEDGSRL---VFRLSGTGSEGATIRLYIEQYEK 182 (221)
Q Consensus 143 ~~~~Dgl~~~~~dg~wi---~vRpSGTEP~~pkiRiY~Ea~~~ 182 (221)
+..-|-+++..++|... ++++||.- .||+++.....
T Consensus 26 lA~gDvV~~~~~~g~~~~~~~v~~sGns----TiRv~~~~~~~ 64 (117)
T PF14085_consen 26 LALGDVVRAEPDDGELWFQKVVESSGNS----TIRVIFDDPGP 64 (117)
T ss_pred CCCCCEEEEEeCCCeEEEEEEEecCCCE----EEEEEEcCCcc
Confidence 44567888888876443 45669999 99999975543
No 52
>cd04905 ACT_CM-PDT C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme. The C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme, found in plants, fungi, bacteria, and archaea. The P-protein of E. coli (CM-PDT, PheA) catalyzes the conversion of chorismate to prephenate and then the decarboxylation and dehydration to form phenylpyruvate. These are the first two steps in the biosynthesis of L-Phe and L-Tyr via the shikimate pathway in microorganisms and plants. The E. coli P-protein (CM-PDT) has three domains with an N-terminal domain with chorismate mutase activity, a middle domain with prephenate dehydratase activity, and an ACT regulatory C-terminal domain. The prephenate dehydratase enzyme has a PDT and ACT domain. The ACT domain is essential to bring about the negative allosteric regulation by L-Phe bindi
Probab=25.14 E-value=2.2e+02 Score=19.69 Aligned_cols=23 Identities=17% Similarity=0.141 Sum_probs=17.0
Q ss_pred EEEEecCCCCCCCCeEEEEEEeecC
Q 027629 158 RLVFRLSGTGSEGATIRLYIEQYEK 182 (221)
Q Consensus 158 wi~vRpSGTEP~~pkiRiY~Ea~~~ 182 (221)
++..||+..++ ..+.+|++....
T Consensus 31 ~i~s~p~~~~~--~~~~f~vd~~~~ 53 (80)
T cd04905 31 KIESRPSKGGL--WEYVFFIDFEGH 53 (80)
T ss_pred EEEEEEcCCCC--ceEEEEEEEECC
Confidence 44579997655 479999988764
No 53
>PF00017 SH2: SH2 domain; InterPro: IPR000980 The Src homology 2 (SH2) domain is a protein domain of about 100 amino-acid residues first identified as a conserved sequence region between the oncoproteins Src and Fps []. Similar sequences were later found in many other intracellular signal-transducing proteins []. SH2 domains function as regulatory modules of intracellular signalling cascades by interacting with high affinity to phosphotyrosine-containing target peptides in a sequence-specific, SH2 domains recognise between 3-6 residues C-terminal to the phosphorylated tyrosine in a fashion that differs from one SH2 domain to another, and strictly phosphorylation-dependent manner [, , , ]. They are found in a wide variety of protein contexts e.g., in association with catalytic domains of phospholipase Cy (PLCy) and the non-receptor protein tyrosine kinases; within structural proteins such as fodrin and tensin; and in a group of small adaptor molecules, i.e Crk and Nck. The domains are frequently found as repeats in a single protein sequence and will then often bind both mono- and di-phosphorylated substrates. The structure of the SH2 domain belongs to the alpha+beta class, its overall shape forming a compact flattened hemisphere. The core structural elements comprise a central hydrophobic anti-parallel beta-sheet, flanked by 2 short alpha-helices. The loop between strands 2 and 3 provides many of the binding interactions with the phosphate group of its phosphopeptide ligand, and is hence designated the phosphate binding loop, the phosphorylated ligand binds perpendicular to the beta-sheet and typically interacts with the phosphate binding loop and a hydrophobic binding pocket that interacts with a pY+3 side chain. The N- and C-termini of the domain are close together in space and on the opposite face from the phosphopeptide binding surface and it has been speculated that this has facilitated their integration into surface-exposed regions of host proteins [].; GO: 0005515 protein binding; PDB: 1M27_A 1KA6_A 1D4W_B 1D4T_A 1D1Z_B 1KA7_A 1UUR_A 1UUS_A 1BLJ_A 1BLK_A ....
Probab=24.13 E-value=51 Score=22.67 Aligned_cols=13 Identities=31% Similarity=0.534 Sum_probs=9.7
Q ss_pred CCeEEEEecCCCCC
Q 027629 155 DGSRLVFRLSGTGS 168 (221)
Q Consensus 155 dg~wi~vRpSGTEP 168 (221)
+| .++||+|.+.|
T Consensus 21 ~G-~FLvR~s~~~~ 33 (77)
T PF00017_consen 21 DG-TFLVRPSSSKP 33 (77)
T ss_dssp TT-EEEEEEESSST
T ss_pred CC-eEEEEeccccc
Confidence 44 77888888765
Done!