BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027630
(221 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255565200|ref|XP_002523592.1| RNA-binding protein, putative [Ricinus communis]
gi|223537154|gb|EEF38787.1| RNA-binding protein, putative [Ricinus communis]
Length = 359
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/216 (87%), Positives = 200/216 (92%)
Query: 6 DSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAP 65
DSV++LM DTHELGGSTVVVDRATPKEDDFRPVGRM+HGGYGAYNAYISAATRYAALGAP
Sbjct: 144 DSVDSLMADTHELGGSTVVVDRATPKEDDFRPVGRMAHGGYGAYNAYISAATRYAALGAP 203
Query: 66 TLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTG 125
TLYDHPG YG GE ++ +GKKIFVGRLPQEAT EDLR+YF RFG ILDVYVPKDPKRTG
Sbjct: 204 TLYDHPGPMYGTGEPARGVGKKIFVGRLPQEATPEDLRQYFGRFGHILDVYVPKDPKRTG 263
Query: 126 HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG 185
HRGFGFVTFAEE VADRVSRRSHEICG QVAIDSATP+DDAGPS NFMMNAA +FGGYGG
Sbjct: 264 HRGFGFVTFAEEGVADRVSRRSHEICGHQVAIDSATPIDDAGPSGNFMMNAAPSFGGYGG 323
Query: 186 PMRTYGRMYGSLDFDDWGYGMGSGRPSRGDWRYRPY 221
P+R +GRMYGSLD+DDWGYGMGS RPSR DWRYRPY
Sbjct: 324 PLRNFGRMYGSLDYDDWGYGMGSARPSRADWRYRPY 359
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 62/129 (48%), Gaps = 1/129 (0%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
+IFV R+P T R +F ++G I+D+Y+PKD HRG GF+TFA D +
Sbjct: 93 RIFVARIPPSVTETTFRSHFEKYGEIIDLYMPKDHSSKAHRGIGFITFASADSVDSLMAD 152
Query: 147 SHEICGQQVAIDSATPL-DDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYG 205
+HE+ G V +D ATP DD P + Y Y + +D G
Sbjct: 153 THELGGSTVVVDRATPKEDDFRPVGRMAHGGYGAYNAYISAATRYAALGAPTLYDHPGPM 212
Query: 206 MGSGRPSRG 214
G+G P+RG
Sbjct: 213 YGTGEPARG 221
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+ V +P E E LR Y ++FG + D V K+ RGFG+VTFA A
Sbjct: 3 RKLVVLGIPWEVDTEGLREYMTKFGELDDCIVMKERSSGRSRGFGYVTFASAEDAKSALS 62
Query: 146 RSHEICGQQVAIDSATP 162
H + + + + ATP
Sbjct: 63 SEHFLGNRMLEVKVATP 79
>gi|359480888|ref|XP_002282572.2| PREDICTED: uncharacterized RNA-binding protein C660.15-like isoform
1 [Vitis vinifera]
gi|359480890|ref|XP_003632540.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like isoform
2 [Vitis vinifera]
gi|296082418|emb|CBI21423.3| unnamed protein product [Vitis vinifera]
Length = 359
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 203/216 (93%)
Query: 6 DSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAP 65
+SV+NLMV+THELGGS VVVDRATPKE++FRPV R+ GGYGAYNAYI+AATRYAALGAP
Sbjct: 144 ESVDNLMVETHELGGSAVVVDRATPKEEEFRPVSRVPQGGYGAYNAYITAATRYAALGAP 203
Query: 66 TLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTG 125
TLYDHPGS YGRGES++ +GKKIFVGRLPQEA+AEDLR+YF RFGRILDVYVPKDPKR+G
Sbjct: 204 TLYDHPGSVYGRGESTRAMGKKIFVGRLPQEASAEDLRQYFGRFGRILDVYVPKDPKRSG 263
Query: 126 HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG 185
HRGFGFVTFAE+ VADRVSRRSHEICGQQVAIDSATPLDDAG S NFMM++AE FGG+GG
Sbjct: 264 HRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPLDDAGSSGNFMMDSAEPFGGFGG 323
Query: 186 PMRTYGRMYGSLDFDDWGYGMGSGRPSRGDWRYRPY 221
PMRTYGRMYGSLDFDDWGYG+G GRPSR DWRYRPY
Sbjct: 324 PMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY 359
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
+IFV R+P R YF +G I D+Y+PKD GHRG GF+TFA D +
Sbjct: 93 RIFVARIPDSVNEAAFRSYFETYGEITDLYMPKDHGSKGHRGIGFITFASAESVDNLMVE 152
Query: 147 SHEICGQQVAIDSATPLDD 165
+HE+ G V +D ATP ++
Sbjct: 153 THELGGSAVVVDRATPKEE 171
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
K+ V +P + + LR Y S+FG + DV V K+ RGFG+VTF A +V
Sbjct: 3 NKLVVLGIPWDVDTDGLRDYMSKFGELKDVIVMKERSTGRSRGFGYVTFGSVEDAKKVLS 62
Query: 146 RSHEICGQQVAIDSATPLDD 165
H + + + + ATP ++
Sbjct: 63 SEHFLGNRMLEVKVATPKEE 82
>gi|224094314|ref|XP_002310138.1| predicted protein [Populus trichocarpa]
gi|222853041|gb|EEE90588.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/225 (82%), Positives = 198/225 (88%), Gaps = 9/225 (4%)
Query: 6 DSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAP 65
DSV+NLM +THELGGSTVVVDRATPKEDDFRP GRM+ GGYGAYNAYISAATRYAALGAP
Sbjct: 143 DSVDNLMAETHELGGSTVVVDRATPKEDDFRPNGRMAPGGYGAYNAYISAATRYAALGAP 202
Query: 66 TLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTG 125
TLYDHPG FYGRGESS+ +GKKIFVGRLPQEA+AEDLR+YF RFG ILDVYVPKDPKRTG
Sbjct: 203 TLYDHPGPFYGRGESSRGMGKKIFVGRLPQEASAEDLRQYFGRFGHILDVYVPKDPKRTG 262
Query: 126 HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG 185
HRGFGFVTFAE+ VADRVSRRSHEICG QVAIDSATP+DDAGPS NFMM+ E FG Y G
Sbjct: 263 HRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSATPIDDAGPSGNFMMSGPEPFGSYAG 322
Query: 186 PMRTYGRMYGSLDFDD---------WGYGMGSGRPSRGDWRYRPY 221
PMR +GRMYG+LD+DD WGYGMGS RPSR DWRYRPY
Sbjct: 323 PMRNFGRMYGTLDYDDASAYMVPSKWGYGMGSARPSRADWRYRPY 367
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
+IFV R+P T R +F ++G I+D+Y+PKD HRG GF+T+A D +
Sbjct: 92 RIFVARIPPSVTETTFRSHFEKYGEIIDLYMPKDHSSKAHRGIGFITYASADSVDNLMAE 151
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYG 184
+HE+ G V +D ATP +D +F N GGYG
Sbjct: 152 THELGGSTVVVDRATPKED-----DFRPNGRMAPGGYG 184
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+ V +P E E LR Y ++FG + D V K+ RGFG+VTF A V
Sbjct: 3 RKLVVLGIPWEIDTEGLREYMTKFGGLEDCIVMKERSSGRSRGFGYVTFVSAEDAKAVLS 62
Query: 146 RSHEICGQQVAIDSATPLDDA-GPSQN 171
H + + + + ATP ++ PS+
Sbjct: 63 SEHFLGKRMLEVKVATPKEEMRAPSKK 89
>gi|224084344|ref|XP_002307266.1| predicted protein [Populus trichocarpa]
gi|222856715|gb|EEE94262.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/225 (81%), Positives = 199/225 (88%), Gaps = 9/225 (4%)
Query: 6 DSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAP 65
DSV++LM +THELGGSTVVVDRATPKEDDFRP+ R + GGYGAYNAYISAATRYAALGAP
Sbjct: 143 DSVDSLMAETHELGGSTVVVDRATPKEDDFRPIARTAPGGYGAYNAYISAATRYAALGAP 202
Query: 66 TLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTG 125
TLYDHPG FYGRGESS+ +GKKIFVGRLPQEA+ EDLR+YF RFG I+DVYVPKDPKRTG
Sbjct: 203 TLYDHPGPFYGRGESSRGMGKKIFVGRLPQEASTEDLRQYFGRFGHIIDVYVPKDPKRTG 262
Query: 126 HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG 185
HRGFGFVTFAE+ VADRVSRRSHEICG QVAIDSATP+DDAGPS NFMM+A E FGGYGG
Sbjct: 263 HRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSATPIDDAGPSGNFMMSAPEPFGGYGG 322
Query: 186 PMRTYGRMYGSLDFDD---------WGYGMGSGRPSRGDWRYRPY 221
PMR +GRMYG+LD+DD WGYGMGS RPSR DWRYRPY
Sbjct: 323 PMRNFGRMYGTLDYDDAGAYMVPSKWGYGMGSARPSRADWRYRPY 367
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
+IFV R+P T R +F ++G I+D+Y+PKD HRG GF+T+A D +
Sbjct: 92 RIFVARIPPSVTETTFRSHFEKYGEIIDLYMPKDHSSKAHRGIGFITYASADSVDSLMAE 151
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYG 184
+HE+ G V +D ATP +D +F A GGYG
Sbjct: 152 THELGGSTVVVDRATPKED-----DFRPIARTAPGGYG 184
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%)
Query: 84 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+ +K+ + +P E E LR+Y S+FG + D V K+ RGFG+VTF A V
Sbjct: 1 MSQKLVILGIPWEIDTEGLRQYMSKFGELEDCIVMKERSSGRSRGFGYVTFVSAEDAKAV 60
Query: 144 SRRSHEICGQQVAIDSATPLDD 165
H + + + I ATP ++
Sbjct: 61 LSGEHFLGKRMLEIKVATPKEE 82
>gi|356496896|ref|XP_003517301.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 362
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/242 (76%), Positives = 203/242 (83%), Gaps = 23/242 (9%)
Query: 1 MPKDQ----------------DSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRM--- 41
MPKDQ DSVENLM +THELGGS VVVDRATPK+DDF+P+GRM
Sbjct: 123 MPKDQGSKMHRGIGFITFASADSVENLMSETHELGGSAVVVDRATPKDDDFKPIGRMPLP 182
Query: 42 --SHGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATA 99
+ GGYGAYNAYISAATRYAALGAPTLYD PG YGRG+ S+R KKIFVGRLP EAT+
Sbjct: 183 PPTQGGYGAYNAYISAATRYAALGAPTLYDQPGPIYGRGDPSRRTSKKIFVGRLPPEATS 242
Query: 100 EDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDS 159
+DLR+YF RFGRILDVYVP+DPKRTGHRGFGFVTFAE+ VADRVSRRSHEICG QVAIDS
Sbjct: 243 DDLRQYFGRFGRILDVYVPRDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDS 302
Query: 160 ATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYGMGSGRPSRGDWRYR 219
ATP+DDAGPS NFMMN+ E+FGGYGGP+R+YGRMYGSLDFDDWGYG+ GRPSR DWRYR
Sbjct: 303 ATPVDDAGPSGNFMMNSMESFGGYGGPVRSYGRMYGSLDFDDWGYGI--GRPSRADWRYR 360
Query: 220 PY 221
PY
Sbjct: 361 PY 362
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 84/214 (39%), Gaps = 50/214 (23%)
Query: 6 DSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAP 65
D + ++ H LG T+ V ATPKE+ PV +++
Sbjct: 56 DDAKEVLSSEHILGNRTLEVKVATPKEEMRAPVKKVT----------------------- 92
Query: 66 TLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTG 125
+IFV R+PQ T R +F ++G I D+Y+PKD
Sbjct: 93 ---------------------RIFVARIPQSVTEATFRSHFEKYGEITDLYMPKDQGSKM 131
Query: 126 HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG 185
HRG GF+TFA + + +HE+ G V +D ATP DD M T GGYG
Sbjct: 132 HRGIGFITFASADSVENLMSETHELGGSAVVVDRATPKDDDFKPIGRMPLPPPTQGGYGA 191
Query: 186 ------PMRTYGRMYGSLDFDDWGYGMGSGRPSR 213
Y + +D G G G PSR
Sbjct: 192 YNAYISAATRYAALGAPTLYDQPGPIYGRGDPSR 225
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+ V +P + E LR Y S+FG + D V K+ RGFG+VTFA A V
Sbjct: 4 RKLVVLGIPWDIDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFASVDDAKEVLS 63
Query: 146 RSHEICGQQVAIDSATPLDD 165
H + + + + ATP ++
Sbjct: 64 SEHILGNRTLEVKVATPKEE 83
>gi|356541820|ref|XP_003539370.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 365
Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 182/246 (73%), Positives = 200/246 (81%), Gaps = 28/246 (11%)
Query: 1 MPKDQ----------------DSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSH- 43
MPKDQ DSVENLM +THELGGS VVVDRATPK+DDF+P+GRM
Sbjct: 123 MPKDQGSKMHRGIGFITFASADSVENLMSETHELGGSAVVVDRATPKDDDFKPMGRMPPP 182
Query: 44 -------GGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQE 96
GGYGAYNAYISAATRYAALGAPTLYDHPG YGRG++ +R KKIFVGRLP E
Sbjct: 183 PPPPPQGGGYGAYNAYISAATRYAALGAPTLYDHPGPIYGRGDA-RRTSKKIFVGRLPPE 241
Query: 97 ATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVA 156
AT++DLR+YF RFGRILDVYVP+DPKR GHRGFGFVTFAE+ ADRVSRRSHEICG VA
Sbjct: 242 ATSDDLRQYFGRFGRILDVYVPRDPKRAGHRGFGFVTFAEDGAADRVSRRSHEICGHPVA 301
Query: 157 IDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYGMGSGRPSR-GD 215
IDSATP+DDAGPS NFMMN+ E+FGGYGGP+R+YGRMYGSLDFDDWGYG+ GRPSR D
Sbjct: 302 IDSATPVDDAGPSGNFMMNSMESFGGYGGPVRSYGRMYGSLDFDDWGYGI--GRPSRAAD 359
Query: 216 WRYRPY 221
WRYRPY
Sbjct: 360 WRYRPY 365
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 44/160 (27%)
Query: 6 DSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAP 65
D + ++ H +G T+ V ATPKE+ PV +++
Sbjct: 56 DDAKEVLSSEHIIGNRTLEVKVATPKEEMRAPVKKVT----------------------- 92
Query: 66 TLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTG 125
+IFV R+PQ T R +F ++G I D+Y+PKD
Sbjct: 93 ---------------------RIFVARIPQSVTEATFRSHFEKYGEITDLYMPKDQGSKM 131
Query: 126 HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD 165
HRG GF+TFA + + +HE+ G V +D ATP DD
Sbjct: 132 HRGIGFITFASADSVENLMSETHELGGSAVVVDRATPKDD 171
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+ V +P + E LR Y S+FG + D V K+ RGFG+VTFA A V
Sbjct: 4 RKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFASVDDAKEVLS 63
Query: 146 RSHEICGQQVAIDSATPLDD 165
H I + + + ATP ++
Sbjct: 64 SEHIIGNRTLEVKVATPKEE 83
>gi|255641298|gb|ACU20926.1| unknown [Glycine max]
gi|255642525|gb|ACU21526.1| unknown [Glycine max]
Length = 213
Score = 349 bits (896), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 173/215 (80%), Positives = 191/215 (88%), Gaps = 7/215 (3%)
Query: 12 MVDTHELGGSTVVVDRATPKEDDFRPVGRM-----SHGGYGAYNAYISAATRYAALGAPT 66
M +THELGGS VVVDRATPK+DDF+ +GRM + GGYGAYNAYISAATRYAALGAPT
Sbjct: 1 MSETHELGGSAVVVDRATPKDDDFKSIGRMPLPPPTLGGYGAYNAYISAATRYAALGAPT 60
Query: 67 LYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH 126
LYD PG YGRG+ S+R KKIFVGRLP EAT++DLR+YF RFGRILDVYVP+DPKRTGH
Sbjct: 61 LYDQPGPIYGRGDPSRRTSKKIFVGRLPPEATSDDLRQYFGRFGRILDVYVPRDPKRTGH 120
Query: 127 RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGP 186
RGFGFVTFAE+ VADRVSRRSHEICG QVAIDSATP+DDAGPS NFMMN+ E+FGGYGGP
Sbjct: 121 RGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSATPVDDAGPSGNFMMNSMESFGGYGGP 180
Query: 187 MRTYGRMYGSLDFDDWGYGMGSGRPSRGDWRYRPY 221
+R+YGRMYGSLDFDDWGYG+ GRPSR DWRYRPY
Sbjct: 181 VRSYGRMYGSLDFDDWGYGI--GRPSRADWRYRPY 213
>gi|449460598|ref|XP_004148032.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cucumis
sativus]
gi|449502733|ref|XP_004161727.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cucumis
sativus]
Length = 377
Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 187/256 (73%), Positives = 202/256 (78%), Gaps = 35/256 (13%)
Query: 1 MPKDQ----------------DSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 44
MPKDQ DSVENLM DTHELGGS VVVDRATPK+DDFRP+G+M G
Sbjct: 122 MPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSNVVVDRATPKDDDFRPIGKMPQG 181
Query: 45 GYG------AYNAYISAATRYAALGAPTLYDHPGSFYGRGESS-----QRIGKKIFVGRL 93
G G AYNAYISAATRYAALGAPTLYDHPGS YG + + +GKKIFVGRL
Sbjct: 182 GGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGSMSPTVPLEFRGMGKKIFVGRL 241
Query: 94 PQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQ 153
PQEA+A+DLR+YF RFGRILDVYVPKDPKR+GHRGFGFVTFAE+ VADRVSRRSHEICGQ
Sbjct: 242 PQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQ 301
Query: 154 QVAIDSATPLDD-------AGPSQNFMMN-AAETFGGYGGPMRTYGRMYGSLDFDDWGYG 205
QVAIDSATPLDD +G S FMMN AA++FGGY GPMRTYGRMYGSLDFDDWGYG
Sbjct: 302 QVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYG 361
Query: 206 MGSGRPSRGDWRYRPY 221
+G GRPSR DWRYRPY
Sbjct: 362 IGGGRPSRADWRYRPY 377
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
+IFV R+ Q T R +F ++G I D+Y+PKD HRG GF+TFA + +
Sbjct: 92 RIFVARISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMAD 151
Query: 147 SHEICGQQVAIDSATPLDD 165
+HE+ G V +D ATP DD
Sbjct: 152 THELGGSNVVVDRATPKDD 170
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%)
Query: 84 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+ +K+ V +P + E LR Y S+FG + D V K+ RGFG+VTFA + A
Sbjct: 1 MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60
Query: 144 SRRSHEICGQQVAIDSATPLDD 165
H + + + + ATP ++
Sbjct: 61 LSSEHFLGNRMMEVKVATPKEE 82
>gi|388511899|gb|AFK44011.1| unknown [Lotus japonicus]
Length = 220
Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 168/220 (76%), Positives = 189/220 (85%), Gaps = 10/220 (4%)
Query: 12 MVDTHELGGSTVVVDRATPKEDDFRPVGRM---------SHGGYGAYNAYISAATRYAAL 62
M +THEL GSTVVVDRATPKEDDF+P+GRM S GGYGAYNAYISA TRYAAL
Sbjct: 1 MKETHELEGSTVVVDRATPKEDDFKPIGRMPQGGSMGRMSQGGYGAYNAYISATTRYAAL 60
Query: 63 GAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPK 122
GAPTLYD+PGS YGRGE ++ +GKKIFVG LPQEAT EDLR+YF RFG ILDVY+P+D K
Sbjct: 61 GAPTLYDNPGSVYGRGEPAREVGKKIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAK 120
Query: 123 RTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG 182
R+GHRGFGFVTFAE+ VADRV+RR HEICG QVAIDSATPLDDAGPS NFM+N+ ++FGG
Sbjct: 121 RSGHRGFGFVTFAEDGVADRVARRPHEICGHQVAIDSATPLDDAGPSGNFMLNSMDSFGG 180
Query: 183 YGGPMRTYGRMYGSLDFDDWGYGMGSGR-PSRGDWRYRPY 221
+GGP+R YGRMYGSLD+DDWGYG+ GR PSR DWRYRPY
Sbjct: 181 FGGPVRPYGRMYGSLDYDDWGYGVPRGRPPSRADWRYRPY 220
>gi|217074298|gb|ACJ85509.1| unknown [Medicago truncatula]
gi|388503058|gb|AFK39595.1| unknown [Medicago truncatula]
Length = 397
Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/235 (72%), Positives = 190/235 (80%), Gaps = 18/235 (7%)
Query: 1 MPKDQ----------------DSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 44
MPKDQ +SVENLM +THELGGS VVVDRATPKEDD +P GRMS G
Sbjct: 123 MPKDQGSKMHRGIGFITFGNAESVENLMSETHELGGSAVVVDRATPKEDDVKPTGRMSQG 182
Query: 45 G-YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLR 103
G YGAYNAYIS ATRYAALGAPTLYDHPG YGRGE +RI KKIFVGRLP EA +EDLR
Sbjct: 183 GGYGAYNAYISTATRYAALGAPTLYDHPGPIYGRGEPRRRISKKIFVGRLPPEANSEDLR 242
Query: 104 RYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPL 163
+YF RFGRI DV +P+DPKRTGHRGFGFVTFA+E VADRVS R HEICG +VAIDSATP+
Sbjct: 243 QYFGRFGRIEDVCIPRDPKRTGHRGFGFVTFADEGVADRVSLRPHEICGHEVAIDSATPV 302
Query: 164 DDAGPSQNFMM-NAAETFGGYGGPMRTYGRMYGSLDFDDWGYGMGSGRPSRGDWR 217
DDA PS NFMM N+ E+FGGYGGP+R+YGRMYG LD+DDWGYG+ S RPSR +++
Sbjct: 303 DDARPSGNFMMNNSMESFGGYGGPVRSYGRMYGGLDYDDWGYGVPSVRPSRAEYQ 357
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
+IFV R+P T E R +F ++G I D+ +PKD HRG GF+TF + +
Sbjct: 93 RIFVARIPPSVTEETFRSHFEKYGDITDLCMPKDQGSKMHRGIGFITFGNAESVENLMSE 152
Query: 147 SHEICGQQVAIDSATPL-DDAGPSQNFMMNAAETFGGYGGPMRT---YGRMYGSLDFDDW 202
+HE+ G V +D ATP DD P+ M+ +G Y + T Y + +D
Sbjct: 153 THELGGSAVVVDRATPKEDDVKPTGR--MSQGGGYGAYNAYISTATRYAALGAPTLYDHP 210
Query: 203 GYGMGSGRPSR 213
G G G P R
Sbjct: 211 GPIYGRGEPRR 221
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+ V +P + E L+ Y S++G + D V K+ RGFG+VTFA A V
Sbjct: 4 RKLVVLGIPWDVDTEGLKEYMSKYGELEDCIVMKERSTGRSRGFGYVTFASVDDAKEVLS 63
Query: 146 RSHEICGQQVAIDSATPLDD 165
H + + + + ATP ++
Sbjct: 64 GEHVLGDRMLEVKVATPKEE 83
>gi|147782862|emb|CAN61300.1| hypothetical protein VITISV_011315 [Vitis vinifera]
Length = 335
Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/199 (81%), Positives = 179/199 (89%), Gaps = 7/199 (3%)
Query: 3 KDQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAAL 62
D SV+NLMV+THELGGSTVV E++FRPV R+ GGYGAYNAYI+AATRYAAL
Sbjct: 141 NDAKSVDNLMVETHELGGSTVV-------EEEFRPVSRVPQGGYGAYNAYITAATRYAAL 193
Query: 63 GAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPK 122
GAPTLYDHPGS YGRGES++ +GKKIFVGRLPQEA+AEDLR+YF RFGRILDVYVPKDPK
Sbjct: 194 GAPTLYDHPGSVYGRGESTRAMGKKIFVGRLPQEASAEDLRQYFGRFGRILDVYVPKDPK 253
Query: 123 RTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG 182
R+GHRGFGFVTFAE+ VADRVSRRSHEICGQQVAIDSATPLDDAG S NFMM++AE FGG
Sbjct: 254 RSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPLDDAGSSGNFMMDSAEPFGG 313
Query: 183 YGGPMRTYGRMYGSLDFDD 201
+GGPMRTYGRMYGSLDFDD
Sbjct: 314 FGGPMRTYGRMYGSLDFDD 332
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF 134
K+ V +P + + LR Y S+FG + DV V K+ RGFG+VTF
Sbjct: 3 NKLVVLGIPWDVDTDGLRDYMSKFGELKDVIVMKERSTGRSRGFGYVTF 51
>gi|357482897|ref|XP_003611735.1| RNA-binding protein [Medicago truncatula]
gi|355513070|gb|AES94693.1| RNA-binding protein [Medicago truncatula]
Length = 403
Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 179/281 (63%), Positives = 196/281 (69%), Gaps = 60/281 (21%)
Query: 1 MPKDQ----------------DSVENLMVDTHELGGSTVVVDRATPK--EDDFRPVGRMS 42
MPKDQ +SVENLM +THELGGS VVVDRATPK EDD +P GRMS
Sbjct: 123 MPKDQGSKMHRGIGFITFGNAESVENLMSETHELGGSAVVVDRATPKAREDDVKPTGRMS 182
Query: 43 HGG-YGAYNAYISAATRYAALGAPTLYDHPGSFYG----RGESSQRIGKKIFVGRLPQEA 97
GG YGAYNAYIS ATRYAALGAPTLYDHPG YG RGE +RI KKIFVGRLP EA
Sbjct: 183 QGGGYGAYNAYISTATRYAALGAPTLYDHPGPIYGSKHGRGEPRRRISKKIFVGRLPPEA 242
Query: 98 TAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAI 157
+EDLR+YF RFGRI DVY+P+DPKRTGHRGFGFVTFA+E VADRVS R HEICG +VAI
Sbjct: 243 NSEDLRQYFGRFGRIEDVYIPRDPKRTGHRGFGFVTFADEGVADRVSLRPHEICGHEVAI 302
Query: 158 DSATPLDDAGPSQNFMM-NAAETFGGYGGPMRTYGRMYGSLDFDDWGYGMGS-------- 208
DSATP+DDA PS NFMM N+ E+FGGYGGP+R+YGRMYG LD+DDWGYG+ S
Sbjct: 303 DSATPVDDARPSGNFMMNNSMESFGGYGGPVRSYGRMYGGLDYDDWGYGVPSVRPSRAEY 362
Query: 209 ----------------------------GRPSRGDWRYRPY 221
GRPSR DWRYRPY
Sbjct: 363 QEQLGRPSRADYQEQIGRPSRADYQEHIGRPSRADWRYRPY 403
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
+IFV R+P T E R +F ++G I D+Y+PKD HRG GF+TF + +
Sbjct: 93 RIFVARIPPSVTEETFRSHFEKYGDITDLYMPKDQGSKMHRGIGFITFGNAESVENLMSE 152
Query: 147 SHEICGQQVAIDSATPL---DDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
+HE+ G V +D ATP DD P+ M+ +G Y + T R Y +L
Sbjct: 153 THELGGSAVVVDRATPKAREDDVKPTGR--MSQGGGYGAYNAYISTATR-YAAL 203
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+ V +P + E L+ Y S++G + D V K+ RGFG+VTFA A V
Sbjct: 4 RKLVVLGIPWDVDTEGLKEYMSKYGELEDCIVMKERSTGRSRGFGYVTFASVDDAKEVLS 63
Query: 146 RSHEICGQQVAIDSATPLDD 165
H + + + + ATP ++
Sbjct: 64 GEHVLGDRMLEVKVATPKEE 83
>gi|358349448|ref|XP_003638749.1| RNA-binding protein [Medicago truncatula]
gi|355504684|gb|AES85887.1| RNA-binding protein [Medicago truncatula]
Length = 371
Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 161/228 (70%), Positives = 181/228 (79%), Gaps = 12/228 (5%)
Query: 6 DSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRM--SHGGYGAYNAYISAATRYAALG 63
DSVENLM +THELGGS VVVDRATPKEDDF+P+GR GY AY+ YI A+TRYAALG
Sbjct: 144 DSVENLMKETHELGGSDVVVDRATPKEDDFKPIGRTRTPQLGYSAYSTYIPASTRYAALG 203
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
APT+YD P S YGRGE ++ I KKIFVGRLP EAT EDLR YF RFG ILDVY+P+D KR
Sbjct: 204 APTMYDRPSSIYGRGEPARGISKKIFVGRLPPEATTEDLRLYFGRFGHILDVYIPRDVKR 263
Query: 124 TGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGY 183
GHRGFGFVTFA+ VADRVSRR HEICGQ+VAIDSA PLD+AGPS N M+N+ ++F GY
Sbjct: 264 PGHRGFGFVTFADSGVADRVSRRPHEICGQEVAIDSAAPLDEAGPSGNTMLNSMDSFRGY 323
Query: 184 GG---------PMRTYGRMYGSLDFDDWGYGMGSGRPSR-GDWRYRPY 221
GG P+R+YGRMY SLDFDD GYG+ S RPSR DWRYRPY
Sbjct: 324 GGPVRPYFDESPVRSYGRMYNSLDFDDLGYGVASRRPSRTTDWRYRPY 371
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 44/160 (27%)
Query: 6 DSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAP 65
D +N++ H LG T+ V ATPKE+ PV +++
Sbjct: 56 DDAKNVLSSEHSLGDRTLEVKVATPKEEMRAPVKKVT----------------------- 92
Query: 66 TLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTG 125
+IFV R+ T E R +F ++G I D+Y+PKD
Sbjct: 93 ---------------------RIFVARIAPSVTEETFRSHFEKYGDITDLYMPKDRGSKT 131
Query: 126 HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD 165
HRG GF+TFA + + + +HE+ G V +D ATP +D
Sbjct: 132 HRGIGFITFATADSVENLMKETHELGGSDVVVDRATPKED 171
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+ V +P + L+ Y S+FG + D V K+ RGFG+VTFA A V
Sbjct: 4 RKLVVLGIPWHVDTDGLKEYMSKFGELEDCIVMKERSTGRSRGFGYVTFASVDDAKNVLS 63
Query: 146 RSHEICGQQVAIDSATPLDD 165
H + + + + ATP ++
Sbjct: 64 SEHSLGDRTLEVKVATPKEE 83
>gi|297798166|ref|XP_002866967.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312803|gb|EFH43226.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 380
Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 166/238 (69%), Positives = 184/238 (77%), Gaps = 22/238 (9%)
Query: 6 DSVENLMVDTHELGGSTVVVDRATPKEDDFRP----VGRMSH-------------GGYGA 48
DSVE+LM DTH+LGG+TV VDRATPKEDD P V RMS GGYGA
Sbjct: 143 DSVEDLMEDTHDLGGTTVAVDRATPKEDDHPPRPPPVARMSRPPVAVAGGGFGAPGGYGA 202
Query: 49 YNAYISAATRYAALGAPTLYDHPGSFYGRGESSQR-IGKKIFVGRLPQEATAEDLRRYFS 107
Y+AYISAATRYAALGAPTLYD+P FYGRGE + R IG KIFVGRLPQEA+ +DLR YF
Sbjct: 203 YDAYISAATRYAALGAPTLYDNPAMFYGRGEPTTRGIGNKIFVGRLPQEASVDDLREYFG 262
Query: 108 RFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAG 167
RFGRI D Y+PKDPKR+GHRGFGFVTFAE VAD V+RRSHEICGQ+VAIDSATPLD+AG
Sbjct: 263 RFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADCVARRSHEICGQEVAIDSATPLDEAG 322
Query: 168 PSQNFMMNAA----ETFGGYGGPMRTYGRMYGSLDFDDWGYGMGSGRPSRGDWRYRPY 221
PS + + E FGGYGGPMRT+GRMYG + DDWGYGM + RPSR DWRYRPY
Sbjct: 323 PSASGSSVLSSSRPEYFGGYGGPMRTFGRMYGGMSLDDWGYGMPNARPSRSDWRYRPY 380
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
+IFV R+P + D R +F R+G I D+Y+PKD HRG GF+TF+ + +
Sbjct: 92 RIFVARIPSSVSESDFRSHFERYGEITDLYMPKDHNSKQHRGIGFITFSSADSVEDLMED 151
Query: 147 SHEICGQQVAIDSATPLDDAGP 168
+H++ G VA+D ATP +D P
Sbjct: 152 THDLGGTTVAVDRATPKEDDHP 173
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+ V +P + ++ L+ Y S+FG + D V KD RGFG+VTFA A +
Sbjct: 3 RKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASSEDAKNALK 62
Query: 146 RSHEICGQQVAIDSATPLDD 165
H + + + + ATP ++
Sbjct: 63 GEHFLGNRILEVKVATPKEE 82
>gi|18419943|ref|NP_568011.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|238481137|ref|NP_001154290.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|15081787|gb|AAK82548.1| AT4g36960/C7A10_400 [Arabidopsis thaliana]
gi|23308345|gb|AAN18142.1| At4g36960/C7A10_400 [Arabidopsis thaliana]
gi|332661324|gb|AEE86724.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332661325|gb|AEE86725.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 379
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/237 (69%), Positives = 187/237 (78%), Gaps = 21/237 (8%)
Query: 6 DSVENLMVDTHELGGSTVVVDRATPKEDDFRP----VGRMSH------------GGYGAY 49
DSVE+LM DTH+LGG+TV VDRATPKEDD P V RMS GGYGAY
Sbjct: 143 DSVEDLMEDTHDLGGTTVAVDRATPKEDDHPPRPPPVARMSRPPVAIAGGFGAPGGYGAY 202
Query: 50 NAYISAATRYAALGAPTLYDHPGSFYGRGESSQR-IGKKIFVGRLPQEATAEDLRRYFSR 108
+AYISAATRYAALGAPTLYD+P +FYGRGE + R IG KIFVGRLPQEA+ +DLR YF R
Sbjct: 203 DAYISAATRYAALGAPTLYDNPATFYGRGEPTTRGIGNKIFVGRLPQEASVDDLRDYFGR 262
Query: 109 FGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGP 168
FG I D Y+PKDPKR+GHRGFGFVTFAE VADRV+RRSHEICGQ+VAIDSATPLD+AGP
Sbjct: 263 FGHIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEICGQEVAIDSATPLDEAGP 322
Query: 169 S--QNFMMNAA--ETFGGYGGPMRTYGRMYGSLDFDDWGYGMGSGRPSRGDWRYRPY 221
S + M++++ E FGGYGGPMR +GRMYG + DDWGYGM + RPSR D RYRPY
Sbjct: 323 SAGASSMLSSSRPEYFGGYGGPMRAFGRMYGGMSLDDWGYGMPNARPSRPDRRYRPY 379
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
+IFV R+P + D R +F R+G I D+Y+PKD HRG GF+TF+ + +
Sbjct: 92 RIFVARIPSSVSESDFRSHFERYGEITDLYMPKDYNSKQHRGIGFITFSSADSVEDLMED 151
Query: 147 SHEICGQQVAIDSATPLDDAGP 168
+H++ G VA+D ATP +D P
Sbjct: 152 THDLGGTTVAVDRATPKEDDHP 173
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+ V +P + ++ L+ Y S+FG + D V KD RGFG+VTFA A +
Sbjct: 3 RKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNALK 62
Query: 146 RSHEICGQQVAIDSATPLDD 165
H + + + + ATP ++
Sbjct: 63 GEHFLGNRILEVKVATPKEE 82
>gi|388511807|gb|AFK43965.1| unknown [Lotus japonicus]
Length = 191
Score = 302 bits (773), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 145/185 (78%), Positives = 165/185 (89%), Gaps = 1/185 (0%)
Query: 38 VGRMSHGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEA 97
+GRMS GGYGAYNAYISA TRYAALGAPTLYD+PGS YGRGE ++ +GKKIFVG LPQEA
Sbjct: 7 MGRMSQGGYGAYNAYISATTRYAALGAPTLYDNPGSVYGRGEPAREVGKKIFVGHLPQEA 66
Query: 98 TAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAI 157
T EDLR+YF RFG ILDVY+P+D KR+GHRGFGFVTFAE+ VADRV+RR HEICG QVAI
Sbjct: 67 TTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAEDGVADRVARRPHEICGHQVAI 126
Query: 158 DSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYGMGSGR-PSRGDW 216
DSATPLDDAGPS NFM+N+ ++FGG+GGP+R YGRMYGSLD+DDWGYG+ GR PSR DW
Sbjct: 127 DSATPLDDAGPSGNFMLNSMDSFGGFGGPVRPYGRMYGSLDYDDWGYGVPRGRPPSRADW 186
Query: 217 RYRPY 221
RY+PY
Sbjct: 187 RYKPY 191
>gi|4006877|emb|CAB16795.1| RNA-binding like protein [Arabidopsis thaliana]
gi|7270645|emb|CAB80362.1| RNA-binding like protein [Arabidopsis thaliana]
Length = 306
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/218 (68%), Positives = 172/218 (78%), Gaps = 21/218 (9%)
Query: 5 QDSVENLMVDTHELGGSTVVVDRATPKEDDFRP----VGRMSH------------GGYGA 48
++SVE+LM DTH+LGG+TV VDRATPKEDD P V RMS GGYGA
Sbjct: 86 RNSVEDLMEDTHDLGGTTVAVDRATPKEDDHPPRPPPVARMSRPPVAIAGGFGAPGGYGA 145
Query: 49 YNAYISAATRYAALGAPTLYDHPGSFYGRGESSQR-IGKKIFVGRLPQEATAEDLRRYFS 107
Y+AYISAATRYAALGAPTLYD+P +FYGRGE + R IG KIFVGRLPQEA+ +DLR YF
Sbjct: 146 YDAYISAATRYAALGAPTLYDNPATFYGRGEPTTRGIGNKIFVGRLPQEASVDDLRDYFG 205
Query: 108 RFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAG 167
RFG I D Y+PKDPKR+GHRGFGFVTFAE VADRV+RRSHEICGQ+VAIDSATPLD+AG
Sbjct: 206 RFGHIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEICGQEVAIDSATPLDEAG 265
Query: 168 PS--QNFMMNAA--ETFGGYGGPMRTYGRMYGSLDFDD 201
PS + M++++ E FGGYGGPMR +GRMYG + DD
Sbjct: 266 PSAGASSMLSSSRPEYFGGYGGPMRAFGRMYGGMSLDD 303
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 32/115 (27%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA------EEV- 138
+K+ V +P + ++ L+ Y S+FG + D V KD RGFG+VTFA EE+
Sbjct: 3 RKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKEEMR 62
Query: 139 -VADRVSR------------------------RSHEICGQQVAIDSATPLDDAGP 168
A +V+R +H++ G VA+D ATP +D P
Sbjct: 63 QPAKKVTRIFVARIPSSVSESDFRNSVEDLMEDTHDLGGTTVAVDRATPKEDDHP 117
>gi|15290173|dbj|BAB63863.1| putative RNA-binding like protein [Oryza sativa Japonica Group]
Length = 523
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/226 (64%), Positives = 171/226 (75%), Gaps = 10/226 (4%)
Query: 3 KDQDSVENLMVDTHELGGSTVVVDRATPKEDDFR--PVGRMSHGGYGAYNAYISAATRYA 60
+ +SV+++M D+HEL G+TVVVDRATPK+++ R P S GGYGAYNAYISAATRYA
Sbjct: 301 QSAESVDSIMQDSHELDGTTVVVDRATPKDEEVRYPPSRGASQGGYGAYNAYISAATRYA 360
Query: 61 ALGAPTLYDHPGSFYGRGE---SSQRIG-KKIFVGRLPQEATAEDLRRYFSRFGRILDVY 116
ALGAPTLYDHPGS YGRG SSQ +G KKIFVGRLPQEA EDLR YF +FGRI+D Y
Sbjct: 361 ALGAPTLYDHPGSAYGRGGYYGSSQGMGNKKIFVGRLPQEANTEDLRHYFGKFGRIVDAY 420
Query: 117 VPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNA 176
+PKDPKR+GHRGFGFVTFA+E VADRV+RRSHEI G +VAID+A PL+ G S M
Sbjct: 421 IPKDPKRSGHRGFGFVTFADEGVADRVARRSHEILGHEVAIDTAAPLE--GDSGGGYMEP 478
Query: 177 AETFGGYGGPMRTYGRMYGSLDFD-DWGYGMGSGRPSRGDWRYRPY 221
+ +G YG MRTYGR +D+D +G+ S SR DWRYRPY
Sbjct: 479 MDLYGAYGS-MRTYGRFCSGIDYDYGYGHSGSSSSRSRADWRYRPY 523
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 78/194 (40%), Gaps = 56/194 (28%)
Query: 6 DSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAP 65
D +N++ H LG T+ V ATPKE+ M G
Sbjct: 215 DDAKNVLECEHVLGNRTLEVKIATPKEE-------MKSQG-------------------- 247
Query: 66 TLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTG 125
+ +IFV R+PQ RR+F +G I D+Y+PK+ G
Sbjct: 248 ----------------SKKATRIFVARIPQSVDESMFRRHFEAYGEITDLYMPKEHGSKG 291
Query: 126 HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDA-------GPSQ------NF 172
HRG GF+TF D + + SHE+ G V +D ATP D+ G SQ N
Sbjct: 292 HRGIGFITFQSAESVDSIMQDSHELDGTTVVVDRATPKDEEVRYPPSRGASQGGYGAYNA 351
Query: 173 MMNAAETFGGYGGP 186
++AA + G P
Sbjct: 352 YISAATRYAALGAP 365
Score = 43.5 bits (101), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%)
Query: 93 LPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICG 152
+P + E LR Y +FG + D V K+ RGFG+VTF+ A V H +
Sbjct: 170 IPWDVDTEGLREYMGKFGPLDDCVVMKERSSGRSRGFGYVTFSSADDAKNVLECEHVLGN 229
Query: 153 QQVAIDSATPLDD 165
+ + + ATP ++
Sbjct: 230 RTLEVKIATPKEE 242
>gi|297598312|ref|NP_001045380.2| Os01g0945800 [Oryza sativa Japonica Group]
gi|57899379|dbj|BAD88026.1| RNA-binding like protein [Oryza sativa Japonica Group]
gi|215686359|dbj|BAG87620.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215706318|dbj|BAG93174.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255674065|dbj|BAF07294.2| Os01g0945800 [Oryza sativa Japonica Group]
Length = 363
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 145/226 (64%), Positives = 171/226 (75%), Gaps = 10/226 (4%)
Query: 3 KDQDSVENLMVDTHELGGSTVVVDRATPKEDDFR--PVGRMSHGGYGAYNAYISAATRYA 60
+ +SV+++M D+HEL G+TVVVDRATPK+++ R P S GGYGAYNAYISAATRYA
Sbjct: 141 QSAESVDSIMQDSHELDGTTVVVDRATPKDEEVRYPPSRGASQGGYGAYNAYISAATRYA 200
Query: 61 ALGAPTLYDHPGSFYGRGE---SSQRIG-KKIFVGRLPQEATAEDLRRYFSRFGRILDVY 116
ALGAPTLYDHPGS YGRG SSQ +G KKIFVGRLPQEA EDLR YF +FGRI+D Y
Sbjct: 201 ALGAPTLYDHPGSAYGRGGYYGSSQGMGNKKIFVGRLPQEANTEDLRHYFGKFGRIVDAY 260
Query: 117 VPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNA 176
+PKDPKR+GHRGFGFVTFA+E VADRV+RRSHEI G +VAID+A PL+ G S M
Sbjct: 261 IPKDPKRSGHRGFGFVTFADEGVADRVARRSHEILGHEVAIDTAAPLE--GDSGGGYMEP 318
Query: 177 AETFGGYGGPMRTYGRMYGSLDFD-DWGYGMGSGRPSRGDWRYRPY 221
+ +G YG MRTYGR +D+D +G+ S SR DWRYRPY
Sbjct: 319 MDLYGAYGS-MRTYGRFCSGIDYDYGYGHSGSSSSRSRADWRYRPY 363
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 78/194 (40%), Gaps = 56/194 (28%)
Query: 6 DSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAP 65
D +N++ H LG T+ V ATPKE+ M G
Sbjct: 55 DDAKNVLECEHVLGNRTLEVKIATPKEE-------MKSQG-------------------- 87
Query: 66 TLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTG 125
+ +IFV R+PQ RR+F +G I D+Y+PK+ G
Sbjct: 88 ----------------SKKATRIFVARIPQSVDESMFRRHFEAYGEITDLYMPKEHGSKG 131
Query: 126 HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDA-------GPSQ------NF 172
HRG GF+TF D + + SHE+ G V +D ATP D+ G SQ N
Sbjct: 132 HRGIGFITFQSAESVDSIMQDSHELDGTTVVVDRATPKDEEVRYPPSRGASQGGYGAYNA 191
Query: 173 MMNAAETFGGYGGP 186
++AA + G P
Sbjct: 192 YISAATRYAALGAP 205
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%)
Query: 84 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+ K+ V +P + E LR Y +FG + D V K+ RGFG+VTF+ A V
Sbjct: 1 MATKLVVLGIPWDVDTEGLREYMGKFGPLDDCVVMKERSSGRSRGFGYVTFSSADDAKNV 60
Query: 144 SRRSHEICGQQVAIDSATPLDD 165
H + + + + ATP ++
Sbjct: 61 LECEHVLGNRTLEVKIATPKEE 82
>gi|226499886|ref|NP_001151590.1| heterogeneous nuclear ribonucleoprotein 27C [Zea mays]
gi|195647980|gb|ACG43458.1| heterogeneous nuclear ribonucleoprotein 27C [Zea mays]
Length = 462
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 159/198 (80%), Gaps = 5/198 (2%)
Query: 6 DSVENLMVDTHELGGSTVVVDRATPKEDDFR-PVGRMSHGGYGAYNAYISAATRYAALGA 64
+SV+++M ++HEL G+TVVVDRATPKE+D R P R S GGYGAYNAYISAATRYA LGA
Sbjct: 246 ESVDSIMQESHELDGTTVVVDRATPKEEDVRYPPSRPSQGGYGAYNAYISAATRYATLGA 305
Query: 65 PTLYDHPGSFYGRGE--SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPK 122
PTLYDHPGS YGRG SSQ +GKKIFVGRLPQEA +DLR YF RFGRI+D Y+PKDPK
Sbjct: 306 PTLYDHPGSAYGRGYYGSSQAVGKKIFVGRLPQEANTDDLRHYFGRFGRIVDAYIPKDPK 365
Query: 123 RTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG 182
R+GHRGFGFVTFA+E VA+RVSRRSHEI G +VAID+A PL++ + ++ + +G
Sbjct: 366 RSGHRGFGFVTFADEGVAERVSRRSHEILGHEVAIDTAAPLENDSAGGGY-IDPMDLYGA 424
Query: 183 YGGPMRTYGRMYGSLDFD 200
YG MR++GR G LD++
Sbjct: 425 YGS-MRSFGRFCGGLDYN 441
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 85/207 (41%), Gaps = 61/207 (29%)
Query: 6 DSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAP 65
D +N++ H LG T+ V ATPKE+ S T+ A
Sbjct: 157 DDAKNVLDCEHVLGSRTLEVKIATPKEE------------------MKSQGTKKAT---- 194
Query: 66 TLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTG 125
+IFV R+PQ RR+F FG ILD+Y+PK+ G
Sbjct: 195 ---------------------RIFVARIPQSVDESMFRRHFEAFGEILDLYMPKEHGSKG 233
Query: 126 HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD------AGPSQ------NFM 173
HRG GF+TF D + + SHE+ G V +D ATP ++ + PSQ N
Sbjct: 234 HRGIGFITFQSAESVDSIMQESHELDGTTVVVDRATPKEEDVRYPPSRPSQGGYGAYNAY 293
Query: 174 MNAAETFGGYGGPM------RTYGRMY 194
++AA + G P YGR Y
Sbjct: 294 ISAATRYATLGAPTLYDHPGSAYGRGY 320
>gi|224030865|gb|ACN34508.1| unknown [Zea mays]
gi|414878724|tpg|DAA55855.1| TPA: heterogeneous nuclear ribonucleoprotein 27C isoform 1 [Zea
mays]
gi|414878725|tpg|DAA55856.1| TPA: heterogeneous nuclear ribonucleoprotein 27C isoform 2 [Zea
mays]
Length = 360
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/201 (65%), Positives = 160/201 (79%), Gaps = 5/201 (2%)
Query: 3 KDQDSVENLMVDTHELGGSTVVVDRATPKEDDFR-PVGRMSHGGYGAYNAYISAATRYAA 61
+ +SV+++M ++HEL G+TVVVDRATPKE+D R P R S GGYGAYNAYISAATRYA
Sbjct: 141 QSAESVDSIMQESHELDGTTVVVDRATPKEEDVRYPPSRPSQGGYGAYNAYISAATRYAT 200
Query: 62 LGAPTLYDHPGSFYGRGE--SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK 119
LGAPTLYDHPGS YGRG SSQ +GKKIFVGRLPQEA +DLR YF RFGRI+D Y+PK
Sbjct: 201 LGAPTLYDHPGSAYGRGYYGSSQAVGKKIFVGRLPQEANTDDLRHYFGRFGRIVDAYIPK 260
Query: 120 DPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAET 179
DPKR+GHRGFGFVTFA+E VA+RVSRRSHEI G +VAID+A PL++ + ++ +
Sbjct: 261 DPKRSGHRGFGFVTFADEGVAERVSRRSHEILGHEVAIDTAAPLENDSAGGGY-IDPMDL 319
Query: 180 FGGYGGPMRTYGRMYGSLDFD 200
+G YG MR++GR G LD++
Sbjct: 320 YGAYGS-MRSFGRFCGGLDYN 339
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 64/126 (50%), Gaps = 18/126 (14%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
+IFV R+PQ RR+F FG ILD+Y+PK+ GHRG GF+TF D + +
Sbjct: 93 RIFVARIPQSVDESMFRRHFEAFGEILDLYMPKEHGSKGHRGIGFITFQSAESVDSIMQE 152
Query: 147 SHEICGQQVAIDSATPLDD------AGPSQ------NFMMNAAETFGGYGGPM------R 188
SHE+ G V +D ATP ++ + PSQ N ++AA + G P
Sbjct: 153 SHELDGTTVVVDRATPKEEDVRYPPSRPSQGGYGAYNAYISAATRYATLGAPTLYDHPGS 212
Query: 189 TYGRMY 194
YGR Y
Sbjct: 213 AYGRGY 218
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%)
Query: 84 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+ K+ V +P + E LR Y ++FG + D V K+ RGFG+VTFA A V
Sbjct: 1 MATKLVVLGIPWDVDTEGLREYMAKFGPLDDCVVMKERSSGRSRGFGYVTFASADDAKNV 60
Query: 144 SRRSHEICGQQVAIDSATPLDD 165
H + + + + ATP ++
Sbjct: 61 LDCEHVLGSRTLEVKIATPKEE 82
>gi|413951342|gb|AFW83991.1| hypothetical protein ZEAMMB73_503439 [Zea mays]
Length = 278
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 128/201 (63%), Positives = 161/201 (80%), Gaps = 5/201 (2%)
Query: 3 KDQDSVENLMVDTHELGGSTVVVDRATPKEDDFR-PVGRMSHGGYGAYNAYISAATRYAA 61
+ +SV+N+M ++HEL G+TVVVDRATPK++D R P R S GGYGAYNAYISAATRYA
Sbjct: 59 QSAESVDNIMQESHELDGTTVVVDRATPKDEDVRYPPSRPSQGGYGAYNAYISAATRYAT 118
Query: 62 LGAPTLYDHPGSFYGRGE--SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK 119
LGAPTLYDHPGS YGRG SQ +GKKIFVGRLPQEA +DLR+YF RFGRI+D Y+PK
Sbjct: 119 LGAPTLYDHPGSAYGRGYYGPSQAVGKKIFVGRLPQEANTDDLRQYFGRFGRIVDAYIPK 178
Query: 120 DPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAET 179
DPKR+GHRGFGFVTFA++ VA+RV+RRSHEI G +VAID+A PL++ + + ++ +
Sbjct: 179 DPKRSGHRGFGFVTFADDGVAERVARRSHEILGHEVAIDTAAPLENDSAAGGY-IDPMDL 237
Query: 180 FGGYGGPMRTYGRMYGSLDFD 200
+G YG MR++GR G LD++
Sbjct: 238 YGAYGS-MRSFGRFCGGLDYN 257
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 64/126 (50%), Gaps = 18/126 (14%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
+IFV R+PQ RR+F FG ILD+Y+PK+ GHRG GF+TF D + +
Sbjct: 11 RIFVARIPQSVDESMFRRHFEAFGEILDLYMPKEHGSKGHRGIGFITFQSAESVDNIMQE 70
Query: 147 SHEICGQQVAIDSATPLDD------AGPSQ------NFMMNAAETFGGYGGPM------R 188
SHE+ G V +D ATP D+ + PSQ N ++AA + G P
Sbjct: 71 SHELDGTTVVVDRATPKDEDVRYPPSRPSQGGYGAYNAYISAATRYATLGAPTLYDHPGS 130
Query: 189 TYGRMY 194
YGR Y
Sbjct: 131 AYGRGY 136
>gi|195624050|gb|ACG33855.1| heterogeneous nuclear ribonucleoprotein 27C [Zea mays]
gi|195644612|gb|ACG41774.1| heterogeneous nuclear ribonucleoprotein 27C [Zea mays]
Length = 360
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 128/201 (63%), Positives = 161/201 (80%), Gaps = 5/201 (2%)
Query: 3 KDQDSVENLMVDTHELGGSTVVVDRATPKEDDFR-PVGRMSHGGYGAYNAYISAATRYAA 61
+ +SV+N+M ++HEL G+TVVVDRATPK++D R P R S GGYGAYNAYISAATRYA
Sbjct: 141 QSAESVDNIMQESHELDGTTVVVDRATPKDEDVRYPPSRPSQGGYGAYNAYISAATRYAT 200
Query: 62 LGAPTLYDHPGSFYGRGE--SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK 119
LGAPTLYDHPGS YGRG SQ +GKKIFVGRLPQEA +DLR+YF RFGRI+D Y+PK
Sbjct: 201 LGAPTLYDHPGSAYGRGYYGPSQAVGKKIFVGRLPQEANTDDLRQYFGRFGRIVDAYIPK 260
Query: 120 DPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAET 179
DPKR+GHRGFGFVTFA++ VA+RV+RRSHEI G +VAID+A PL++ + + ++ +
Sbjct: 261 DPKRSGHRGFGFVTFADDGVAERVARRSHEILGHEVAIDTAAPLENDSAAGGY-IDPMDL 319
Query: 180 FGGYGGPMRTYGRMYGSLDFD 200
+G YG MR++GR G LD++
Sbjct: 320 YGAYGS-MRSFGRFCGGLDYN 339
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 64/126 (50%), Gaps = 18/126 (14%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
+IFV R+PQ RR+F FG ILD+Y+PK+ GHRG GF+TF D + +
Sbjct: 93 RIFVARIPQSVDESMFRRHFEAFGEILDLYMPKEHGSKGHRGIGFITFQSAESVDNIMQE 152
Query: 147 SHEICGQQVAIDSATPLDD------AGPSQ------NFMMNAAETFGGYGGPM------R 188
SHE+ G V +D ATP D+ + PSQ N ++AA + G P
Sbjct: 153 SHELDGTTVVVDRATPKDEDVRYPPSRPSQGGYGAYNAYISAATRYATLGAPTLYDHPGS 212
Query: 189 TYGRMY 194
YGR Y
Sbjct: 213 AYGRGY 218
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%)
Query: 84 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+ K+ V +P + E LR Y ++FG + D V K+ RGFG+VTFA A V
Sbjct: 1 MAMKLVVLGIPWDVDTEGLREYMAKFGPLDDCVVMKERSSGRSRGFGYVTFASADDAKNV 60
Query: 144 SRRSHEICGQQVAIDSATPLDD 165
H + + + + ATP ++
Sbjct: 61 LDCEHVLGSRTLEVKVATPKEE 82
>gi|212723574|ref|NP_001131827.1| uncharacterized protein LOC100193201 [Zea mays]
gi|194692652|gb|ACF80410.1| unknown [Zea mays]
gi|194701144|gb|ACF84656.1| unknown [Zea mays]
gi|224032577|gb|ACN35364.1| unknown [Zea mays]
gi|413951337|gb|AFW83986.1| heterogeneous nuclear ribonucleoprotein 27C isoform 1 [Zea mays]
gi|413951338|gb|AFW83987.1| heterogeneous nuclear ribonucleoprotein 27C isoform 2 [Zea mays]
gi|413951339|gb|AFW83988.1| heterogeneous nuclear ribonucleoprotein 27C isoform 3 [Zea mays]
gi|413951340|gb|AFW83989.1| heterogeneous nuclear ribonucleoprotein 27C isoform 4 [Zea mays]
gi|413951341|gb|AFW83990.1| heterogeneous nuclear ribonucleoprotein 27C isoform 5 [Zea mays]
Length = 360
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 128/201 (63%), Positives = 161/201 (80%), Gaps = 5/201 (2%)
Query: 3 KDQDSVENLMVDTHELGGSTVVVDRATPKEDDFR-PVGRMSHGGYGAYNAYISAATRYAA 61
+ +SV+N+M ++HEL G+TVVVDRATPK++D R P R S GGYGAYNAYISAATRYA
Sbjct: 141 QSAESVDNIMQESHELDGTTVVVDRATPKDEDVRYPPSRPSQGGYGAYNAYISAATRYAT 200
Query: 62 LGAPTLYDHPGSFYGRGE--SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK 119
LGAPTLYDHPGS YGRG SQ +GKKIFVGRLPQEA +DLR+YF RFGRI+D Y+PK
Sbjct: 201 LGAPTLYDHPGSAYGRGYYGPSQAVGKKIFVGRLPQEANTDDLRQYFGRFGRIVDAYIPK 260
Query: 120 DPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAET 179
DPKR+GHRGFGFVTFA++ VA+RV+RRSHEI G +VAID+A PL++ + + ++ +
Sbjct: 261 DPKRSGHRGFGFVTFADDGVAERVARRSHEILGHEVAIDTAAPLENDSAAGGY-IDPMDL 319
Query: 180 FGGYGGPMRTYGRMYGSLDFD 200
+G YG MR++GR G LD++
Sbjct: 320 YGAYGS-MRSFGRFCGGLDYN 339
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 64/126 (50%), Gaps = 18/126 (14%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
+IFV R+PQ RR+F FG ILD+Y+PK+ GHRG GF+TF D + +
Sbjct: 93 RIFVARIPQSVDESMFRRHFEAFGEILDLYMPKEHGSKGHRGIGFITFQSAESVDNIMQE 152
Query: 147 SHEICGQQVAIDSATPLDD------AGPSQ------NFMMNAAETFGGYGGPM------R 188
SHE+ G V +D ATP D+ + PSQ N ++AA + G P
Sbjct: 153 SHELDGTTVVVDRATPKDEDVRYPPSRPSQGGYGAYNAYISAATRYATLGAPTLYDHPGS 212
Query: 189 TYGRMY 194
YGR Y
Sbjct: 213 AYGRGY 218
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%)
Query: 84 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+ K+ V +P + E LR Y ++FG + D V K+ RGFG+VTFA A V
Sbjct: 1 MATKLVVLGIPWDVDTEGLREYMAKFGPLDDCVVMKERSSGRSRGFGYVTFASADDAKNV 60
Query: 144 SRRSHEICGQQVAIDSATPLDD 165
H + + + + ATP ++
Sbjct: 61 LDCEHVLGSRTLEVKVATPKEE 82
>gi|222619863|gb|EEE55995.1| hypothetical protein OsJ_04743 [Oryza sativa Japonica Group]
Length = 372
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 141/235 (60%), Positives = 168/235 (71%), Gaps = 19/235 (8%)
Query: 3 KDQDSVENLMVDTHELGGSTVVVDRATPKEDDFR--PVGRMSHGGYGAYNAYISAATRYA 60
+ +SV+++M D+HEL G+TVVVDRATPK+++ R P S GGYGAYNAYISAATRYA
Sbjct: 141 QSAESVDSIMQDSHELDGTTVVVDRATPKDEEVRYPPSRGASQGGYGAYNAYISAATRYA 200
Query: 61 ALGAPTLYDHPGSFYGRGESSQRI-------------GKKIFVGRLPQEATAEDLRRYFS 107
ALGAPTLYDHPGS YG S+ +I KKIFVGRLPQEA EDLR YF
Sbjct: 201 ALGAPTLYDHPGSAYGSKSSATKITGGGYYGSSQGMGNKKIFVGRLPQEANTEDLRHYFG 260
Query: 108 RFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAG 167
+FGRI+D Y+PKDPKR+GHRGFGFVTFA+E VADRV+RRSHEI G +VAID+A PL+ G
Sbjct: 261 KFGRIVDAYIPKDPKRSGHRGFGFVTFADEGVADRVARRSHEILGHEVAIDTAAPLE--G 318
Query: 168 PSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFD-DWGYGMGSGRPSRGDWRYRPY 221
S M + +G YG MRTYGR +D+D +G+ S SR DWRYRPY
Sbjct: 319 DSGGGYMEPMDLYGAYGS-MRTYGRFCSGIDYDYGYGHSGSSSSRSRADWRYRPY 372
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 78/194 (40%), Gaps = 56/194 (28%)
Query: 6 DSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAP 65
D +N++ H LG T+ V ATPKE+ M G
Sbjct: 55 DDAKNVLECEHVLGNRTLEVKIATPKEE-------MKSQG-------------------- 87
Query: 66 TLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTG 125
+ +IFV R+PQ RR+F +G I D+Y+PK+ G
Sbjct: 88 ----------------SKKATRIFVARIPQSVDESMFRRHFEAYGEITDLYMPKEHGSKG 131
Query: 126 HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDA-------GPSQ------NF 172
HRG GF+TF D + + SHE+ G V +D ATP D+ G SQ N
Sbjct: 132 HRGIGFITFQSAESVDSIMQDSHELDGTTVVVDRATPKDEEVRYPPSRGASQGGYGAYNA 191
Query: 173 MMNAAETFGGYGGP 186
++AA + G P
Sbjct: 192 YISAATRYAALGAP 205
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%)
Query: 84 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+ K+ V +P + E LR Y +FG + D V K+ RGFG+VTF+ A V
Sbjct: 1 MATKLVVLGIPWDVDTEGLREYMGKFGPLDDCVVMKERSSGRSRGFGYVTFSSADDAKNV 60
Query: 144 SRRSHEICGQQVAIDSATPLDD 165
H + + + + ATP ++
Sbjct: 61 LECEHVLGNRTLEVKIATPKEE 82
>gi|414878726|tpg|DAA55857.1| TPA: hypothetical protein ZEAMMB73_809994 [Zea mays]
Length = 209
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 129/192 (67%), Positives = 153/192 (79%), Gaps = 5/192 (2%)
Query: 12 MVDTHELGGSTVVVDRATPKEDDFR-PVGRMSHGGYGAYNAYISAATRYAALGAPTLYDH 70
M ++HEL G+TVVVDRATPKE+D R P R S GGYGAYNAYISAATRYA LGAPTLYDH
Sbjct: 1 MQESHELDGTTVVVDRATPKEEDVRYPPSRPSQGGYGAYNAYISAATRYATLGAPTLYDH 60
Query: 71 PGSFYGRGE--SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRG 128
PGS YGRG SSQ +GKKIFVGRLPQEA +DLR YF RFGRI+D Y+PKDPKR+GHRG
Sbjct: 61 PGSAYGRGYYGSSQAVGKKIFVGRLPQEANTDDLRHYFGRFGRIVDAYIPKDPKRSGHRG 120
Query: 129 FGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMR 188
FGFVTFA+E VA+RVSRRSHEI G +VAID+A PL++ + ++ + +G YG MR
Sbjct: 121 FGFVTFADEGVAERVSRRSHEILGHEVAIDTAAPLENDSAGGGY-IDPMDLYGAYGS-MR 178
Query: 189 TYGRMYGSLDFD 200
++GR G LD++
Sbjct: 179 SFGRFCGGLDYN 190
>gi|218189712|gb|EEC72139.1| hypothetical protein OsI_05159 [Oryza sativa Indica Group]
Length = 864
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 155/213 (72%), Gaps = 18/213 (8%)
Query: 3 KDQDSVENLMVDTHELGGSTVVVDRATPKEDDFR--PVGRMSHGGYGAYNAYISAATRYA 60
+ +SV+++M D+HEL G+TVVVDRATPK+++ R P S GGYGAYNAYISAATRYA
Sbjct: 141 QSAESVDSIMQDSHELDGTTVVVDRATPKDEEVRYPPSRGASQGGYGAYNAYISAATRYA 200
Query: 61 ALGAPTLYDHPGSFYGRGESSQRI-------------GKKIFVGRLPQEATAEDLRRYFS 107
ALGAPTLYDHPGS YG S+ +I KKIFVGRLPQEA EDLR YF
Sbjct: 201 ALGAPTLYDHPGSAYGSKSSATKITGGGYYGSSQGMGNKKIFVGRLPQEANTEDLRHYFG 260
Query: 108 RFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAG 167
+FGRI+D Y+PKDPKR+GHRGFGFVTFA+E VADRV+RRSHEI G +VAID+A PL+ G
Sbjct: 261 KFGRIVDAYIPKDPKRSGHRGFGFVTFADEGVADRVARRSHEILGHEVAIDTAAPLE--G 318
Query: 168 PSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFD 200
S M + +G YG MRTYGR +D+D
Sbjct: 319 DSGGGYMEPMDLYGAYGS-MRTYGRFCSGIDYD 350
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 80/194 (41%), Gaps = 56/194 (28%)
Query: 6 DSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAP 65
D +N++ H LG T+ V ATPKE+
Sbjct: 55 DDAKNVLECEHVLGNRTLEVKIATPKEEM------------------------------- 83
Query: 66 TLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTG 125
+ + S++ +IFV R+PQ RR+F +G I D+Y+PK+ G
Sbjct: 84 -----------KSQGSKK-ATRIFVARIPQSVDESMFRRHFEAYGEITDLYMPKEHGSKG 131
Query: 126 HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDA-------GPSQ------NF 172
HRG GF+TF D + + SHE+ G V +D ATP D+ G SQ N
Sbjct: 132 HRGIGFITFQSAESVDSIMQDSHELDGTTVVVDRATPKDEEVRYPPSRGASQGGYGAYNA 191
Query: 173 MMNAAETFGGYGGP 186
++AA + G P
Sbjct: 192 YISAATRYAALGAP 205
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%)
Query: 84 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+ K+ V +P + E LR Y +FG + D V K+ RGFG+VTF+ A V
Sbjct: 1 MATKLVVLGIPWDVDTEGLREYMGKFGPLDDCVVMKERSSGRSRGFGYVTFSSADDAKNV 60
Query: 144 SRRSHEICGQQVAIDSATPLDD 165
H + + + + ATP ++
Sbjct: 61 LECEHVLGNRTLEVKIATPKEE 82
>gi|326514108|dbj|BAJ92204.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525627|dbj|BAJ88860.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 363
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 134/226 (59%), Positives = 165/226 (73%), Gaps = 10/226 (4%)
Query: 3 KDQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPV----GRMSHGGYGAYNAYISAATR 58
+ + V+N+M + HE+ G+TVVVDRATPK+++ R G GGYG+YNAYI+AATR
Sbjct: 141 RSAECVDNVMQENHEIDGTTVVVDRATPKDEEVRHPPRRGGAEREGGYGSYNAYITAATR 200
Query: 59 YAALGAPTLYDHPGSFYGRGESSQ--RIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVY 116
YAALG PTLYDHPG YGRG ++ KKIFVGRLPQEA +DL YF RFGRI+D Y
Sbjct: 201 YAALGVPTLYDHPGPAYGRGYLNEPPVSSKKIFVGRLPQEANTDDLWDYFGRFGRIVDAY 260
Query: 117 VPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNA 176
+PKDPK++GHRGFGFVTFAE+ VADRV+RRSHEI GQ+VA+DSA P+ + GPS+ M
Sbjct: 261 IPKDPKKSGHRGFGFVTFAEDGVADRVARRSHEILGQEVAVDSAAPV-EGGPSRGGYMEP 319
Query: 177 AETFGGYGGPMRTYGRMYGSLDFDDWGYG-MGSGRPSRGDWRYRPY 221
+G Y GPM +YG+ GSL + D+GYG GS SR RYRPY
Sbjct: 320 PGPYGAY-GPMMSYGQFSGSLGY-DYGYGPSGSSGRSRVQPRYRPY 363
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
S + +IFV R+PQ RR+F FG I D+Y+PK+ HRG GFVTF
Sbjct: 86 SGNKKATRIFVARIPQSVDESMFRRHFQSFGEITDLYMPKELGSKEHRGIGFVTFRSAEC 145
Query: 140 ADRVSRRSHEICGQQVAIDSATPLDDA--GPSQNFMMNAAETFGGYG 184
D V + +HEI G V +D ATP D+ P + AE GGYG
Sbjct: 146 VDNVMQENHEIDGTTVVVDRATPKDEEVRHPPRR---GGAEREGGYG 189
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%)
Query: 84 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+ K+ V +P + E L+ Y S+FG + D V KD RGFG+VTF+ A V
Sbjct: 1 MASKLVVLGIPWDVDTEGLKEYMSKFGSLDDCIVMKDRSSGRSRGFGYVTFSSVEDAKNV 60
Query: 144 SRRSHEICGQQVAIDSATPLDDAGPSQN 171
H + + + + ATP ++ S N
Sbjct: 61 VNSEHILGDRTLEVKIATPKEEMRASGN 88
>gi|357133920|ref|XP_003568569.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Brachypodium
distachyon]
Length = 366
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 128/206 (62%), Positives = 158/206 (76%), Gaps = 10/206 (4%)
Query: 3 KDQDSVENLMVDTHELGGSTVVVDRATPKEDDFR--PVGRMS----HGGYGAYNAYISAA 56
+ + V+++M +THEL G+TVVVDRATPK++D R P R + GGYG+YNAYI+AA
Sbjct: 141 RSAECVDDVMKETHELDGTTVVVDRATPKDEDVRHPPRSRRAPVHGDGGYGSYNAYITAA 200
Query: 57 TRYAALGAPTLYDHPGSFYGRGESSQRI--GKKIFVGRLPQEATAEDLRRYFSRFGRILD 114
TRYAALG PTLYDHPG YGRG S++ + GKKIFVGRLPQEA +DL YF RFGRI+D
Sbjct: 201 TRYAALGVPTLYDHPGQAYGRGYSNEPLVTGKKIFVGRLPQEANTDDLWDYFGRFGRIVD 260
Query: 115 VYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMM 174
Y+PKDPKR+GHRGFGFVTFA++ VADRV+RRSHEI GQ+VA+DSA PL + G S + M
Sbjct: 261 AYIPKDPKRSGHRGFGFVTFADDGVADRVARRSHEILGQEVAVDSAAPL-EGGSSGSGYM 319
Query: 175 NAAETFGGYGGPMRTYGRMYGSLDFD 200
+A +G Y GPM +YG GSL +D
Sbjct: 320 ESAGPYGAY-GPMLSYGHFSGSLGYD 344
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
S + +IFV R+PQ RR+F FG I+D+Y+PK+ HRG GFVTF
Sbjct: 86 SGNKKATRIFVARIPQSVDESMFRRHFQSFGEIIDLYMPKELGSKDHRGIGFVTFRSAEC 145
Query: 140 ADRVSRRSHEICGQQVAIDSATPLDD 165
D V + +HE+ G V +D ATP D+
Sbjct: 146 VDDVMKETHELDGTTVVVDRATPKDE 171
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%)
Query: 84 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+ K+ V +P + E LR Y S+FG + D V KD RGFG+VTF+ E A V
Sbjct: 1 MASKLVVLGIPWDVDTEGLREYMSKFGPLDDCIVMKDRSSGRSRGFGYVTFSSEEDAKNV 60
Query: 144 SRRSHEICGQQVAIDSATPLDDAGPSQN 171
H + + + + ATP ++ S N
Sbjct: 61 VNCEHILGDRTLEVKIATPKEEMRASGN 88
>gi|388505314|gb|AFK40723.1| unknown [Medicago truncatula]
Length = 165
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/165 (69%), Positives = 129/165 (78%), Gaps = 10/165 (6%)
Query: 67 LYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH 126
+YD P S YGRGE ++ I KKIFVGRLP EAT EDLR YF RFG ILDVY+P+D KR GH
Sbjct: 1 MYDRPSSIYGRGEPARGISKKIFVGRLPPEATTEDLRLYFGRFGHILDVYIPRDVKRPGH 60
Query: 127 RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG- 185
RGFGFVTFA+ VADRVSRR HEICGQ+VAIDSA PLD+AGPS N M+N+ ++F GYGG
Sbjct: 61 RGFGFVTFADSGVADRVSRRPHEICGQEVAIDSAAPLDEAGPSGNTMLNSMDSFRGYGGP 120
Query: 186 --------PMRTYGRMYGSLDFDDWGYGMGSGRPSR-GDWRYRPY 221
P+R+YGRMY SLDFDD GYG+ S RPSR DWRYRPY
Sbjct: 121 VRPYFDESPVRSYGRMYNSLDFDDLGYGVASRRPSRTTDWRYRPY 165
>gi|148905888|gb|ABR16106.1| unknown [Picea sitchensis]
Length = 409
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/269 (50%), Positives = 153/269 (56%), Gaps = 60/269 (22%)
Query: 7 SVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAPT 66
SV+ LM +TH LGG+T+ VDRATPKE+ + + GGYGAYNAYI+AATRY ALG+ T
Sbjct: 147 SVDRLMSETHMLGGATIAVDRATPKEESTKQWAKPVSGGYGAYNAYINAATRYGALGSAT 206
Query: 67 LYDHP------------GSFYGRGES---------------------------------S 81
LYDHP G YG G S
Sbjct: 207 LYDHPSSGFRDGYASEVGGGYGSGNSWPPHGAGGMIGGSSYGMADRGAGYGPGSFSGPPP 266
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
+ +GKKIFVGRL QEATA DLRRYFS FG ++DVYVPKD +R+GHRGFGFVTFAE+ VAD
Sbjct: 267 RGMGKKIFVGRLSQEATAGDLRRYFSNFGTVVDVYVPKDARRSGHRGFGFVTFAEDGVAD 326
Query: 142 RVSRRSHEICGQQVAIDSATPLDD--AGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 199
RVSRRSHEI GQQVAIDSATP DD A G GP G Y
Sbjct: 327 RVSRRSHEILGQQVAIDSATPPDDDIHYVDDGIPPPAGGIGGPLRGPASYSGGGY----- 381
Query: 200 DDWGYGMG-------SGRPSRGDWRYRPY 221
DWGYG GR SR D+RYRPY
Sbjct: 382 -DWGYGSSGIGPGPTGGRASRMDYRYRPY 409
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 12/115 (10%)
Query: 81 SQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVA 140
S++I +IFV R+P T + R+YF FG I D+Y+PK+ GHRG GF+TF
Sbjct: 90 SKKI-TRIFVARIPPSVTEDAFRKYFEEFGNIEDLYMPKEKGSKGHRGIGFITFESSGSV 148
Query: 141 DRVSRRSHEICGQQVAIDSATPLDD-----AGP------SQNFMMNAAETFGGYG 184
DR+ +H + G +A+D ATP ++ A P + N +NAA +G G
Sbjct: 149 DRLMSETHMLGGATIAVDRATPKEESTKQWAKPVSGGYGAYNAYINAATRYGALG 203
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+ V +P + E L+ Y +FG + DV V +D RGFG+ TF+ A +
Sbjct: 6 RKLVVLGIPWDVDTEGLQDYMGKFGELDDVIVMRDRATGRSRGFGYATFSSVEDAKKALD 65
Query: 146 RSHEICGQQVAIDSATPLDD-AGPSQNF 172
H + G+ + + ATP ++ PS+
Sbjct: 66 SEHFLNGRALEVKVATPKEEMKAPSKKI 93
>gi|302755192|ref|XP_002961020.1| hypothetical protein SELMODRAFT_164019 [Selaginella moellendorffii]
gi|302767142|ref|XP_002966991.1| hypothetical protein SELMODRAFT_144531 [Selaginella moellendorffii]
gi|300164982|gb|EFJ31590.1| hypothetical protein SELMODRAFT_144531 [Selaginella moellendorffii]
gi|300171959|gb|EFJ38559.1| hypothetical protein SELMODRAFT_164019 [Selaginella moellendorffii]
Length = 395
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/254 (50%), Positives = 145/254 (57%), Gaps = 40/254 (15%)
Query: 3 KDQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAAL 62
+D DSVE LM THEL GST+ VDRATPK G+ YG Y Y +AA R+ A
Sbjct: 147 EDPDSVEKLMGKTHELAGSTIAVDRATPKF-----WGKSYPSIYGPYGIYTNAAARFGAF 201
Query: 63 G------APTLYDHP------------GSFYG------RGESSQR--IGKKIFVGRLPQE 96
G A YD+P G YG SSQ IGKKIFVGRLP +
Sbjct: 202 GTHFGSSAFGAYDYPPALATEIAGSGIGGAYGPVSAPMNISSSQNRGIGKKIFVGRLPLD 261
Query: 97 ATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVA 156
ATAEDLRRYF FGR+LDVYVPKD K+ HRGFGFVTFA+E VADRV+ RSHE+ G Q+A
Sbjct: 262 ATAEDLRRYFGNFGRLLDVYVPKDAKKLSHRGFGFVTFADESVADRVALRSHELLGVQIA 321
Query: 157 IDSATPLDDAGPSQNFM--MNAAETFGGYGGPMR----TYGRMYGSLDFD---DWGYGMG 207
+D ATP D+AG M + G GGPMR G YG +D W YG
Sbjct: 322 VDRATPQDEAGAGSGTASYMGPSSILQGAGGPMRGASAIAGSAYGLGGYDYNGAWLYGDA 381
Query: 208 SGRPSRGDWRYRPY 221
RPSR + RYRPY
Sbjct: 382 GHRPSRMETRYRPY 395
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
++FV R+P + R YF ++GRI D Y+PKD HRG GFVT+ + +++ +
Sbjct: 99 RVFVARIPPSVNDDTFRNYFEKYGRITDAYMPKDQGSKAHRGIGFVTYEDPDSVEKLMGK 158
Query: 147 SHEICGQQVAIDSATP--LDDAGPS----QNFMMNAAETFGGYG 184
+HE+ G +A+D ATP + PS NAA FG +G
Sbjct: 159 THELAGSTIAVDRATPKFWGKSYPSIYGPYGIYTNAAARFGAFG 202
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+ V +P + E LR Y ++FG + DV V KD RGFG+VTF A++
Sbjct: 12 RKLVVLGIPWDVDTEGLRSYMTKFGGLDDVIVMKDRSTGRSRGFGYVTFTSSEDAEKALL 71
Query: 146 RSHEICGQQVAIDSATPLDD 165
H + G+ + + ATP ++
Sbjct: 72 AQHSLSGRILEVKVATPKEE 91
>gi|218196677|gb|EEC79104.1| hypothetical protein OsI_19737 [Oryza sativa Indica Group]
Length = 297
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/215 (51%), Positives = 136/215 (63%), Gaps = 16/215 (7%)
Query: 3 KDQDSVENLMVDTHELGGSTVVVDRATPKE-DDFRPV-GRMSHGGYGAYNAYISAATRYA 60
+ + V+N+M +THEL G+TV VDRATPK + P+ S Y+ R
Sbjct: 59 RSAECVDNIMQETHELDGTTVAVDRATPKVVSNTHPLFNYNSVDALCIYDNAFFPTNRMK 118
Query: 61 ALGAP-------TLYDHPGSFYGRGE--SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGR 111
LG P T YDHPG YGRG S GKKIFVGRLPQEA +DL YF RFGR
Sbjct: 119 MLGTPQGELFRATSYDHPGPAYGRGHIGGSLGTGKKIFVGRLPQEANTDDLWDYFGRFGR 178
Query: 112 ILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQN 171
I+D Y+PKDPKR+GH GFGFVTFA++ VADRV++RSHEI GQ+VA+D+A PL+ G S
Sbjct: 179 IVDAYIPKDPKRSGHGGFGFVTFADDGVADRVAQRSHEILGQEVAVDTAEPLE--GGSGG 236
Query: 172 FMMNAAETFGGYG--GPMRTYGRMYGSLDFDDWGY 204
+ AE +G YG G + YGR GSL + D+GY
Sbjct: 237 GYLEPAEAYGPYGAYGSLLPYGRFSGSLGY-DYGY 270
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 55/107 (51%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
+IFV R+PQ RR+F FG I+D+Y+PK+ + HRG GF+TF D + +
Sbjct: 11 RIFVARIPQSVDESKFRRHFEAFGEIIDLYMPKELRSKSHRGIGFITFRSAECVDNIMQE 70
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRM 193
+HE+ G VA+D ATP + F N+ + Y RM
Sbjct: 71 THELDGTTVAVDRATPKVVSNTHPLFNYNSVDALCIYDNAFFPTNRM 117
>gi|168067843|ref|XP_001785814.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662538|gb|EDQ49378.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 382
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 116/241 (48%), Positives = 140/241 (58%), Gaps = 41/241 (17%)
Query: 1 MPKDQ----------------DSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 44
MPKDQ +SV+NLM +THELGGST+ VDRATPKED + GR HG
Sbjct: 116 MPKDQGSKAHRGIGFVTFENPESVDNLMNETHELGGSTIAVDRATPKEDGVKTWGRGFHG 175
Query: 45 G------------YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESS--QRIGKKIFV 90
G YGAY Y +AA G YD+ GS +G + +G KIFV
Sbjct: 176 GNQNSASNAGSGAYGAYGVYTNAARFGGLGGGFGAYDYSGSGFGSPPIPPLRGLGTKIFV 235
Query: 91 GRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEI 150
GRLP EA AEDLRRYF+ FGRI DVYVPKD K+T HRGFGFVTF++E A+RV+ R+HEI
Sbjct: 236 GRLPPEANAEDLRRYFNNFGRISDVYVPKDAKKTSHRGFGFVTFSDEGAAERVALRNHEI 295
Query: 151 CGQQVAIDSATPLDDAG--PSQNFMMNAAETFGGYGGPMR---------TYGRMYGSLDF 199
G Q+A+D A P D+ P + + GG GGPMR YG + GSLDF
Sbjct: 296 LGHQIAVDRAAPQDETANVPYMSGVGGVGSLSGGAGGPMRGSNAPLQGSGYGSLPGSLDF 355
Query: 200 D 200
+
Sbjct: 356 N 356
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
++FV R+P T E R YF ++G + D Y+PKD HRG GFVTF D +
Sbjct: 86 RVFVARIPPSVTDEAFRSYFEKYGTLTDAYMPKDQGSKAHRGIGFVTFENPESVDNLMNE 145
Query: 147 SHEICGQQVAIDSATPLDDA---------GPSQNFMMNAAE-TFGGYG 184
+HE+ G +A+D ATP +D G +QN NA +G YG
Sbjct: 146 THELGGSTIAVDRATPKEDGVKTWGRGFHGGNQNSASNAGSGAYGAYG 193
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 93 LPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICG 152
+P + E LR+Y +FG + DV V KD RGFG+VTFA A + H + G
Sbjct: 4 IPWDIDTEGLRQYMLKFGELDDVIVMKDRGTGRSRGFGYVTFAAVEDAKKAVSTQHSLNG 63
Query: 153 QQVAIDSATPLDDAGP 168
+ + + ATP ++ P
Sbjct: 64 RMLEVKVATPKEEMKP 79
>gi|326522138|dbj|BAK04197.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 371
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/230 (48%), Positives = 146/230 (63%), Gaps = 12/230 (5%)
Query: 3 KDQDSVENLMVDTHELGGSTVVVDRATPKEDDFR-PVGRM------SHGGYGAYNAYISA 55
+ +SV+++M ++HEL G+T+ VD ATPK++D R P R GYGAY+ YI+A
Sbjct: 143 QSAESVDSIMQESHELDGTTLHVDHATPKDEDTRHPPSRAFQDGGDYGLGYGAYDVYIAA 202
Query: 56 ATRYAALGAPTLYDHPGSFYGRGESS--QRIGKKIFVGRLPQEATAEDLRRYFSRFGRIL 113
T + A+G PT YDH G YGRG S Q IGKKIFVG LPQ A +DLR YF FG +
Sbjct: 203 TTMFGAVGPPTRYDHQGPAYGRGYSGSPQGIGKKIFVGGLPQGAKKDDLRNYFGGFGGVA 262
Query: 114 DVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAID-SATPLDDAGPSQNF 172
DV++P+DPK +GHRGFGFVTF++E VAD ++ +SHEI G +V +D +A P D+
Sbjct: 263 DVFIPRDPKGSGHRGFGFVTFSDEGVADNIADKSHEILGCKVIVDITAPPRGDSSGRFTD 322
Query: 173 MMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYG-MGSGRPSRGDWRYRPY 221
M + G MR +G G+L + D GYG GSG SR D R+RPY
Sbjct: 323 PMPGVDLNAPPYGSMRPFGMFCGNLGY-DQGYGPSGSGSRSRTDGRHRPY 371
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 66/136 (48%), Gaps = 24/136 (17%)
Query: 83 RIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR 142
+ +IFVGR+PQ A RR+F FG I+D+Y+PK+ GHRG GF+TF D
Sbjct: 91 KTATRIFVGRIPQSADESMFRRHFEAFGEIIDLYMPKEHGSKGHRGIGFITFQSAESVDS 150
Query: 143 VSRRSHEICGQQVAIDSATPLDDAG---PSQNFM---------------MNAAETFGGYG 184
+ + SHE+ G + +D ATP D+ PS+ F + A FG G
Sbjct: 151 IMQESHELDGTTLHVDHATPKDEDTRHPPSRAFQDGGDYGLGYGAYDVYIAATTMFGAVG 210
Query: 185 GPMR------TYGRMY 194
P R YGR Y
Sbjct: 211 PPTRYDHQGPAYGRGY 226
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%)
Query: 84 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+G K+ V LP + +E LR++ ++FG + D V KD RGFG+VTF+ V
Sbjct: 1 MGTKLVVFGLPWDVDSEGLRKHMAKFGPLEDCVVMKDRLSGRSRGFGYVTFSSADDVKNV 60
Query: 144 SRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG 182
H + + + + ATP ++ P A F G
Sbjct: 61 LEFKHFLRNRALEVKIATPREEMKPQPQGTKTATRIFVG 99
>gi|167999759|ref|XP_001752584.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696115|gb|EDQ82455.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 380
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/199 (50%), Positives = 120/199 (60%), Gaps = 33/199 (16%)
Query: 1 MPKDQ----------------DSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 44
MPKDQ +SV+ LM +THELGGST+ VDRATPKED + GR HG
Sbjct: 118 MPKDQGSKAHRGIGFVTFEIPESVDRLMNETHELGGSTIAVDRATPKEDGVKTWGRGFHG 177
Query: 45 G------------YGAYNAYISAATRYAALGAPTLYDHP--GSFYGRGESS---QRIGKK 87
G YGAY Y + A G YD+P GSF G + +G K
Sbjct: 178 GNQNSGSNAGSGSYGAYGVYTNTARFGGLGGGFGAYDYPVSGSFGSGGPPVPPLRGLGTK 237
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
IFVGRLP EA AEDLRRYF+ FGRI DVYVPKD K+T HRGFGFVTF++E A+RV+ R+
Sbjct: 238 IFVGRLPPEANAEDLRRYFNNFGRISDVYVPKDAKKTSHRGFGFVTFSDEGAAERVALRN 297
Query: 148 HEICGQQVAIDSATPLDDA 166
HEI G Q+A+D A P D+
Sbjct: 298 HEILGHQIAVDRAAPQDEV 316
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
++FV R+P T E R YF ++G + D Y+PKD HRG GFVTF DR+
Sbjct: 88 RVFVARIPPSVTDEAFRSYFEKYGTLTDAYMPKDQGSKAHRGIGFVTFEIPESVDRLMNE 147
Query: 147 SHEICGQQVAIDSATPLDDA---------GPSQNFMMNAAE-TFGGYG 184
+HE+ G +A+D ATP +D G +QN NA ++G YG
Sbjct: 148 THELGGSTIAVDRATPKEDGVKTWGRGFHGGNQNSGSNAGSGSYGAYG 195
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 93 LPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICG 152
+P + E LR+Y +FG + DV V KD RGFG+VTFA A + H + G
Sbjct: 6 IPWDVDTEGLRQYMLKFGELDDVIVMKDRGTGRSRGFGYVTFATVEDAKKTVSTQHSLNG 65
Query: 153 QQVAIDSATPLDDAGP 168
+ + + ATP ++ P
Sbjct: 66 RMLEVKVATPKEEMKP 81
>gi|224285299|gb|ACN40374.1| unknown [Picea sitchensis]
Length = 520
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 119/229 (51%), Gaps = 65/229 (28%)
Query: 1 MPKDQ----------------DSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 44
MPKDQ +SV+ +M ++HEL GST+ VDRATPKE+ R R G
Sbjct: 125 MPKDQTTKQHRGIGFVTYENAESVDEVMSESHELAGSTIAVDRATPKEETGRVWERNFPG 184
Query: 45 GYGAYNAYISAATRYAALGAPTL--YDHPGS-----------FYGRGE------------ 79
G +N++++ T + YD PGS YGR
Sbjct: 185 ASGVFNSHVNT-THFGTFDVSAFGGYDFPGSDRAAKGNTYGGNYGRNNLWRAGPPAPQVG 243
Query: 80 -----------------------SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVY 116
+ R+G+KIFVGR+P EATAEDL+ YFS+FG++LD Y
Sbjct: 244 GPSPVIPSIDPSAMNYGSTDSNFAPSRMGRKIFVGRIPVEATAEDLQLYFSQFGQVLDAY 303
Query: 117 VPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD 165
+PKD K+ HRGFGFVTFAEE A+ VS+R HEI G +A+D A+PLD+
Sbjct: 304 LPKDAKKISHRGFGFVTFAEESTAEHVSQRRHEILGHLIAVDRASPLDE 352
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 101/160 (63%), Gaps = 25/160 (15%)
Query: 84 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+GKKIF+GR+P EAT EDLR YFS++GRILDVY+PKD K+ HRGFGFVTFAEE A+ V
Sbjct: 364 LGKKIFIGRIPVEATTEDLRLYFSQYGRILDVYLPKDAKKISHRGFGFVTFAEESAAEHV 423
Query: 144 SRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMR---------TYGRMY 194
++++HEI G ++A+D A PLD+ +++ + + FGG GGP+R YG M
Sbjct: 424 AQKAHEILGHRIAVDRAAPLDE---TRSGLKPSNALFGGAGGPLRGSSSTLSGSAYGNMP 480
Query: 195 GSLDFDD-WGYGMGSG------------RPSRGDWRYRPY 221
+L F+ W G G R SR + RYRPY
Sbjct: 481 ANLAFNSGWTPYDGVGHMATANGGPSGHRISRMETRYRPY 520
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 68/159 (42%), Gaps = 44/159 (27%)
Query: 9 ENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAPTLY 68
E M H L G T+ V ATPK D+ RP
Sbjct: 61 EKAMAGQHVLQGRTLEVKIATPK-DEMRP------------------------------- 88
Query: 69 DHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRG 128
+S++I +IFV R+ T E R YF ++G ILD Y+PKD HRG
Sbjct: 89 -----------TSRKI-TRIFVARISPTVTDEMFRSYFEKYGSILDAYMPKDQTTKQHRG 136
Query: 129 FGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAG 167
GFVT+ D V SHE+ G +A+D ATP ++ G
Sbjct: 137 IGFVTYENAESVDEVMSESHELAGSTIAVDRATPKEETG 175
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+ V +P + E L +Y +FG + DV V KD RGFG+VTF+ + A++
Sbjct: 6 RKLVVLGIPWDVDTEGLGQYMCQFGDLEDVIVMKDRVSGRSRGFGYVTFSSDGGAEKAMA 65
Query: 146 RSHEICGQQVAIDSATPLDDAGPS 169
H + G+ + + ATP D+ P+
Sbjct: 66 GQHVLQGRTLEVKIATPKDEMRPT 89
>gi|384254104|gb|EIE27578.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 412
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 98/188 (52%), Gaps = 25/188 (13%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKE-------DDFRPVGRMSHGGYGAYNAY---- 52
+ DSVE +M H + G + +DRATPK+ +DF P +++G G AY
Sbjct: 184 NADSVEAVMSSPHSMNGQELAIDRATPKDKPSDSAGNDFNPYQAVANGN-GRTTAYSSGG 242
Query: 53 ----ISAATRYAALGAPTLYDHPGS------FYGRGES-SQRIGKKIFVGRLPQEATAED 101
+ AA A G GS G G S R G +IFVG+L +E T D
Sbjct: 243 GSSSVVAAFEGANGGQAANSGGSGSGELFQPMRGDGASIDTRSGPRIFVGKLNKETTEND 302
Query: 102 LRRYFSRFGRILDVYVPKDP-KRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQVAIDS 159
++ YF+RFG ++DVY+P+D R+ HRGFGFVTF + R+ + H+I G VAIDS
Sbjct: 303 VKEYFTRFGYVMDVYLPRDKVNRSEHRGFGFVTFETDGAVLRIHAHGQHQIKGSVVAIDS 362
Query: 160 ATPLDDAG 167
A P + G
Sbjct: 363 AVPRREEG 370
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
+IFV R+P R+YF ++G + D Y+PKD + HRG GFVTFA + V
Sbjct: 135 RIFVARIPLSVNDAQFRQYFEQYGSVQDAYMPKDATKQSHRGIGFVTFANADSVEAVMSS 194
Query: 147 SHEICGQQVAIDSATPLD 164
H + GQ++AID ATP D
Sbjct: 195 PHSMNGQELAIDRATPKD 212
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+ + LP + T L ++FS+FG + +V + KD RGFGFVTF + A +
Sbjct: 48 RKLVILGLPWDTTEASLEQHFSQFGPLQEVVIMKDRTTGKSRGFGFVTFFRAMDASCAAS 107
Query: 146 RSHEICGQQVAIDSATP 162
+ H + G++ A P
Sbjct: 108 QEHVVDGRRCEAKYALP 124
>gi|222631384|gb|EEE63516.1| hypothetical protein OsJ_18332 [Oryza sativa Japonica Group]
Length = 120
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 78/113 (69%), Gaps = 6/113 (5%)
Query: 112 ILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQN 171
I+ + +DPKR+GH GFGFVTFA++ VADRV++RSHEI GQ+VA+D+A PL+ G S
Sbjct: 11 IIQDQLMEDPKRSGHGGFGFVTFADDGVADRVAQRSHEILGQEVAVDTAEPLE--GGSGG 68
Query: 172 FMMNAAETFGGYG--GPMRTYGRMYGSLDFDDWGYG-MGSGRPSRGDWRYRPY 221
+ AE +G YG G + YGR GSL + D+GYG G+ SR + RYRPY
Sbjct: 69 GYLEPAEAYGPYGAYGSLLPYGRFSGSLGY-DYGYGPSGNSSRSRPESRYRPY 120
>gi|302838536|ref|XP_002950826.1| hypothetical protein VOLCADRAFT_43575 [Volvox carteri f.
nagariensis]
gi|300263943|gb|EFJ48141.1| hypothetical protein VOLCADRAFT_43575 [Volvox carteri f.
nagariensis]
Length = 303
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 84/161 (52%), Gaps = 6/161 (3%)
Query: 6 DSVENLMVDTHELGGSTVVVDRATPKEDD--FRPVGRMSHGGYGAYNAYISAATRYAALG 63
DSVE +M H + G + +DRATPKE+ + + G G ++ + A A
Sbjct: 138 DSVEKVMAVKHWMNGHEIAIDRATPKEEPAALKNIFARLPMGPGQRRSFDNEAGGGLARF 197
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK-DPK 122
+D G+ YG G G +IF+G+L ++ D++ YF RFG ++DVY+PK
Sbjct: 198 GGGSWDVLGAEYGHGAGGA--GPRIFIGKLTKDTGEADVKEYFMRFGYVMDVYLPKAKDN 255
Query: 123 RTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATP 162
+ HRGFGFVTF + R VS H + G +AID A P
Sbjct: 256 KAEHRGFGFVTFETDAAIQRVVSHGQHRLKGSTIAIDIAMP 296
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
+GE S +IFV R+P T ++YF FG++ D Y+PKD + G+RG GFVTFA
Sbjct: 77 KGEPSPPRTTRIFVARIPPSVTESQFKQYFEGFGKLQDAYMPKDHSKQGYRGIGFVTFAS 136
Query: 137 EVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFM 173
++V H + G ++AID ATP ++ +N
Sbjct: 137 PDSVEKVMAVKHWMNGHEIAIDRATPKEEPAALKNIF 173
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+ V LP E T + L+ YFS++G + V KD RGFGFVTF + A R
Sbjct: 1 KLAVLGLPWETTEDTLKAYFSQYGTLECAEVMKDRYTGKSRGFGFVTFIDPASATRALSV 60
Query: 147 SHEICGQQVAIDSATPLDDAGPSQN 171
H I G++ A P + P +
Sbjct: 61 EHTIDGRRCEAKVALPKGEPSPPRT 85
>gi|258597221|ref|XP_001347758.2| nucleic acid binding protein, putative [Plasmodium falciparum 3D7]
gi|254832603|gb|AAN35671.2| nucleic acid binding protein, putative [Plasmodium falciparum 3D7]
Length = 588
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 64/95 (67%), Gaps = 7/95 (7%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR- 145
+IF RLP EA+ +DL +YFS+FG+I+D+YV ++ ++GFGFV+F ++ ++V +
Sbjct: 227 RIFATRLPFEASKKDLEKYFSKFGKIVDIYVSRNISNNKNKGFGFVSFEKQESMNKVLKE 286
Query: 146 RSHEICGQQVAIDSATPLDDA------GPSQNFMM 174
+ H ICG+++ +D A+ DD PS+N++M
Sbjct: 287 KLHIICGKEIVVDVASMRDDKYKHLFHMPSENYLM 321
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 78 GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF--- 134
G+ + G K+FV +L T E LR YF +FG I+D+Y+P D RG FVTF
Sbjct: 494 GDEWNKRGYKLFVTKLNSATTIEKLRNYFEKFGEIIDIYMPNDVYTNRPRGIAFVTFLDN 553
Query: 135 --AEEVVADRVSRRSHEICGQQVAIDSATP 162
+ +++D S+ H I G++V +D A P
Sbjct: 554 ESVKNILSDEHSK--HIIDGKEVVLDLADP 581
>gi|82538759|ref|XP_723811.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478234|gb|EAA15376.1| RNA recognition motif, putative [Plasmodium yoelii yoelii]
Length = 498
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VSR 145
+IFV RLP E +DL +YFS++G+I+D+YV K+ ++GFGFV+F ++ D+ +S
Sbjct: 215 RIFVTRLPFEVNKKDLEKYFSKYGKIIDIYVSKNLSNNKNKGFGFVSFENQISMDKALSE 274
Query: 146 RSHEICGQQVAIDSAT 161
+ H ICG+++ +D A+
Sbjct: 275 KLHIICGKEIVVDIAS 290
>gi|159479752|ref|XP_001697954.1| RNA binding protein [Chlamydomonas reinhardtii]
gi|158274052|gb|EDO99837.1| RNA binding protein [Chlamydomonas reinhardtii]
Length = 316
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 85/171 (49%), Gaps = 16/171 (9%)
Query: 6 DSVENLMVDTHELGGSTVVVDRATPKED------------DFRPVGRMSHGGYGAYNAYI 53
DSVE +M H + G + +DRATPKE+ D +G +
Sbjct: 143 DSVEKVMAVKHWMNGHEIAIDRATPKEEPTALKNIFARLPDLNTLG--AAAAVQQMMQAA 200
Query: 54 SAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRIL 113
++A+ +A G +L ++ R G +IF+G+L ++ + D++ YF RFG ++
Sbjct: 201 ASASAASAAGRRSLDSTLKRLENPAIANARAGPRIFIGKLTKDTSEADVKDYFMRFGYVM 260
Query: 114 DVYVPK-DPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATP 162
DVY+PK + HRGFGFVTF + R VS H + G +AID A P
Sbjct: 261 DVYLPKAKDNKAEHRGFGFVTFETDAAIQRVVSHGQHRLKGSTIAIDIAMP 311
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
+IFV R+P T R+YF FG++ D Y+PKD + G+RG GFVTFA ++V
Sbjct: 92 RIFVARIPPSVTEAQFRQYFEGFGKLQDAYMPKDHSKQGYRGIGFVTFASPDSVEKVMAV 151
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNF 172
H + G ++AID ATP ++ +N
Sbjct: 152 KHWMNGHEIAIDRATPKEEPTALKNI 177
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 39/77 (50%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+ V LP E T E L+ YFS+FG + V KD RGFGFVTF + A R
Sbjct: 1 RKLAVLGLPWETTEETLKVYFSQFGALEGAEVMKDRYTGKSRGFGFVTFTDAGSATRALG 60
Query: 146 RSHEICGQQVAIDSATP 162
H I G++ A P
Sbjct: 61 VEHTIDGRRCEAKIALP 77
>gi|68074213|ref|XP_679021.1| nucleic acid binding factor [Plasmodium berghei strain ANKA]
gi|56499660|emb|CAH99922.1| nucleic acid binding factor, putative [Plasmodium berghei]
Length = 491
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VSR 145
+IFV RLP E +DL +YFS++G+I+D+Y+ K+ ++GFGFV+F ++ D+ +S
Sbjct: 107 RIFVTRLPFEVNKKDLEKYFSKYGKIIDIYISKNLSNNKNKGFGFVSFENQISMDKALSE 166
Query: 146 RSHEICGQQVAIDSAT 161
+ H ICG+++ +D A+
Sbjct: 167 KLHIICGKEIVVDVAS 182
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FV +L T E LR YF +G I+D+Y+P D RG FVTF + E V +S
Sbjct: 404 KLFVTKLNSVTTIETLRNYFESYGEIIDIYMPNDICTNKPRGIAFVTFLDSECVKKILSN 463
Query: 146 RS--HEICGQQVAI 157
++ H I G++V I
Sbjct: 464 KNYKHIIDGKEVNI 477
>gi|307110322|gb|EFN58558.1| hypothetical protein CHLNCDRAFT_140687 [Chlorella variabilis]
Length = 619
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 64 APTLYD-HPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDP- 121
APT+ + GS G +S R G +IF+G+L ++ + +D++ +F RFG +LDVY+P+D
Sbjct: 456 APTMSSSNSGSL---GPASARAGPRIFIGKLNKDTSEQDVKDHFMRFGFVLDVYLPRDKN 512
Query: 122 KRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATP 162
+ HRGFGFVTF E R V+ H I G VAIDSA P
Sbjct: 513 NKREHRGFGFVTFETEAAIQRVVAHGPHHIKGSIVAIDSAVP 554
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 108 RFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDA- 166
+FG D Y+PKDP + GHRG GFVT++ + V ++H + G ++AID ATP +
Sbjct: 97 KFGICQDCYMPKDPSKQGHRGIGFVTYSSPESVELVMSQTHVLNGNEIAIDRATPKEKTT 156
Query: 167 ------GPSQ-NFMMNAAETFGGYGGPMRTYGRMYG 195
SQ N M A + GG YG M G
Sbjct: 157 LLPGRLSMSQPNLQMAGASSHGG-----SQYGLMRG 187
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%)
Query: 79 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEV 138
E S+ +K+ V +P + L+++F +FG + + + ++ RGFGFVTF
Sbjct: 11 ELSELEQRKVVVLGVPWQTDDSTLQQHFCQFGVVEEAQIMREKYTGKSRGFGFVTFRSTT 70
Query: 139 VADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMM 174
A + H I G++ A P G Q+ M
Sbjct: 71 DALKAVNAEHCIDGRKCEAKFALPEGKFGICQDCYM 106
Score = 39.7 bits (91), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 6 DSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMS 42
+SVE +M TH L G+ + +DRATPKE GR+S
Sbjct: 127 ESVELVMSQTHVLNGNEIAIDRATPKEKTTLLPGRLS 163
>gi|297724061|ref|NP_001174394.1| Os05g0376175 [Oryza sativa Japonica Group]
gi|255676319|dbj|BAH93122.1| Os05g0376175 [Oryza sativa Japonica Group]
Length = 134
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 70/157 (44%), Gaps = 43/157 (27%)
Query: 6 DSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAP 65
+S + ++ D H LG T+ V ATPKE+ R G I ATR
Sbjct: 13 NSSQKVVKDEHILGNRTLEVKIATPKEE-MRAPG-------------IKKATR------- 51
Query: 66 TLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTG 125
IFV R+PQ RR+F FG I+D+Y+PK+ +
Sbjct: 52 ----------------------IFVARIPQSVDESKFRRHFEAFGEIIDLYMPKELRSKS 89
Query: 126 HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 162
HRG GF+TF D + + +HE+ G VA+D ATP
Sbjct: 90 HRGIGFITFRSAECVDNIMQETHELDGTTVAVDRATP 126
Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 3 KDQDSVENLMVDTHELGGSTVVVDRATPKE 32
+ + V+N+M +THEL G+TV VDRATPK+
Sbjct: 99 RSAECVDNIMQETHELDGTTVAVDRATPKK 128
>gi|452822947|gb|EME29962.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Galdieria
sulphuraria]
Length = 368
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 81 SQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVV 139
+Q KIFVG L E T E L++YF +GR+LD + +D K TGH RGFGFVTF +E
Sbjct: 45 NQNNNSKIFVGGLSWETTEETLQKYFESYGRVLDCVIMRD-KHTGHPRGFGFVTFEKEES 103
Query: 140 ADRVSRRSHEICGQQVAIDSATP 162
ADR + + HE+ G+QV A P
Sbjct: 104 ADRAATKRHELDGRQVEAKKAVP 126
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+KIFVG LP T ED YF R G +++ ++ D + RGFGFVTF+ E + ++V
Sbjct: 141 RKIFVGGLPLSCTEEDFMEYFERLGHVVEAHIMYDHQTGISRGFGFVTFSSEDMVEKVFE 200
Query: 146 RS-HEICGQQVAIDSATP 162
+S HEI G+ V + A P
Sbjct: 201 QSQHEIKGKIVEVKKAEP 218
>gi|242043256|ref|XP_002459499.1| hypothetical protein SORBIDRAFT_02g005620 [Sorghum bicolor]
gi|241922876|gb|EER96020.1| hypothetical protein SORBIDRAFT_02g005620 [Sorghum bicolor]
Length = 455
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 99/234 (42%), Gaps = 65/234 (27%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E + +D H + G V +A P++D I + + +++G
Sbjct: 63 DPAVAERVTMDKHMIDGRMVEAKKAVPRDDH-----------------SIVSKSNASSIG 105
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+P G G + +KIFVG LP T D RRYF +FG I DV V D
Sbjct: 106 SP----------GPGRT-----RKIFVGGLPSNVTEADFRRYFEQFGVITDVVVMYDHNT 150
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDDA---------GPSQNFM 173
RGFGF+T+ E D+ +S HE+ G+ V + A P + + G QN+
Sbjct: 151 QRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKRAVPKEQSPGPVVRSPVGVGQNYA 210
Query: 174 MNAAETF-------------GGYGGPMRTYGRMYGSLD-----FDDW--GYGMG 207
MN +F GGYG MR GR YG L F + GYGMG
Sbjct: 211 MNRVHSFLNGFNQGYNPNPIGGYG--MRVDGR-YGLLSGARNGFSSFGPGYGMG 261
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + E + + LR YF RFG + + + +D RGFGFV FA+ VA+RV+
Sbjct: 14 KLFVGGISWETSEDRLRDYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADPAVAERVTMD 73
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 74 KHMIDGRMVEAKKAVPRDD 92
>gi|242047760|ref|XP_002461626.1| hypothetical protein SORBIDRAFT_02g005670 [Sorghum bicolor]
gi|241925003|gb|EER98147.1| hypothetical protein SORBIDRAFT_02g005670 [Sorghum bicolor]
Length = 453
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 99/234 (42%), Gaps = 65/234 (27%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E + +D H + G V +A P++D I + + +++G
Sbjct: 61 DPAVAERVTMDKHMIDGRMVEAKKAVPRDDH-----------------SIVSKSNASSIG 103
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+P G G + +KIFVG LP T D RRYF +FG I DV V D
Sbjct: 104 SP----------GPGRT-----RKIFVGGLPSNVTEADFRRYFEQFGVITDVVVMYDHNT 148
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDDA---------GPSQNFM 173
RGFGF+T+ E D+ +S HE+ G+ V + A P + + G QN+
Sbjct: 149 QRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKRAVPKEQSPGPVVRSPVGVGQNYA 208
Query: 174 MNAAETF-------------GGYGGPMRTYGRMYGSLD-----FDDW--GYGMG 207
MN +F GGYG MR GR YG L F + GYGMG
Sbjct: 209 MNRVHSFLNGFNQGYNPNPIGGYG--MRVDGR-YGLLSGARNGFSSFGPGYGMG 259
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + E + + LR YF RFG + + + +D RGFGFV FA+ VA+RV+
Sbjct: 12 KLFVGGISWETSEDRLRDYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADPAVAERVTMD 71
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 72 KHMIDGRMVEAKKAVPRDD 90
>gi|157112076|ref|XP_001651782.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878175|gb|EAT42400.1| AAEL006057-PA [Aedes aegypti]
Length = 482
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
R ++ KKIFVG + Q+ +AE++R+YFS+FG++ + + D + HRGFGFVTF
Sbjct: 181 NRPKTQSNKTKKIFVGGVSQDTSAEEVRQYFSQFGKVDETVMLMDQQTKRHRGFGFVTFE 240
Query: 136 EEVVADRVSR-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRT 189
E V DRV H I ++V A P + P+ ++ G G P+ T
Sbjct: 241 NEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVTPTAQQLLQKRIILGNLGLPIAT 295
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 72 GSFYGR---GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRG 128
GS GR SS K+FVG L + ++E L YF FG++ DV + KDP RG
Sbjct: 85 GSSSGRSTPNSSSDPAPGKLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRG 144
Query: 129 FGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP 162
FGF+TF E D+V + H + G+++ ATP
Sbjct: 145 FGFITFQEPNSVDKVLKVPIHTLDGKKIDPKHATP 179
>gi|312378143|gb|EFR24795.1| hypothetical protein AND_10386 [Anopheles darlingi]
Length = 486
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R ++ KKIFVG + Q+ +AE+++ YFS+FG++ + + D + HRGFGFVTF
Sbjct: 191 RPKTQSNKTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFEN 250
Query: 137 EVVADRVSR-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPM 187
E V DRV H I ++V A P + P+ ++ G G PM
Sbjct: 251 EDVVDRVCEIHFHTIKNKKVECKKAQPKEAVAPTAQQLLQKRIILGNLGVPM 302
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + ++E L YF FG + DV + KDP RGFGF+TF E D+V +
Sbjct: 112 KLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVDKVLQV 171
Query: 147 S-HEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 172 PIHTLDGKKIDPKHATP 188
>gi|325185730|emb|CCA20211.1| conserved unknown protein putative [Albugo laibachii Nc14]
Length = 465
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 74/159 (46%), Gaps = 30/159 (18%)
Query: 8 VENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAPTL 67
++ ++ ++H + G TV V RA P+ + S + + GA
Sbjct: 156 LDRVLEESHTIDGRTVEVKRAIPR------------------DKTASGPSDVRSSGA--- 194
Query: 68 YDHPGSFYGRGESSQRI--GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTG 125
+GRG S I KK+FVG LP T +D RRYF FGRI D V D +
Sbjct: 195 -------HGRGNSGGVITESKKVFVGGLPPSVTEQDFRRYFEEFGRITDAVVMFDRETQR 247
Query: 126 HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLD 164
RGFGFVTF EE V ++HE+ G+ V I A P +
Sbjct: 248 SRGFGFVTFEEEGAVAEVISKTHELHGKVVEIKRAEPKE 286
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 81 SQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVA 140
+Q+ K+F+G + E T E LR +F ++G + D + KD RGFGFVTFA+ V
Sbjct: 97 AQKQPGKLFIGGVSWETTEETLRDHFGKYGPLTDAALMKDKFSGQPRGFGFVTFADVAVL 156
Query: 141 DRVSRRSHEICGQQVAIDSATPLDD--AGPS 169
DRV SH I G+ V + A P D +GPS
Sbjct: 157 DRVLEESHTIDGRTVEVKRAIPRDKTASGPS 187
>gi|347966951|ref|XP_321067.5| AGAP001993-PA [Anopheles gambiae str. PEST]
gi|333469826|gb|EAA01260.6| AGAP001993-PA [Anopheles gambiae str. PEST]
Length = 556
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R ++ KKIFVG + Q+ +AE+++ YFS+FG++ + + D + HRGFGFVTF
Sbjct: 262 RPKTQSNKTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFEN 321
Query: 137 EVVADRVSR-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPM 187
E V DRV H I ++V A P + P+ ++ G G PM
Sbjct: 322 EDVVDRVCEIHFHTIKNKKVECKKAQPKEAVAPTAQQLLQKRIILGNLGVPM 373
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + ++E L YF FG + DV + KDP RGFGF+TF E D+V +
Sbjct: 183 KLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVDKVLQV 242
Query: 147 S-HEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 243 PIHTLDGKKIDPKHATP 259
>gi|170042573|ref|XP_001848995.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167866108|gb|EDS29491.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 426
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
R ++ KKIFVG + Q+ +AE++++YFS+FG++ + + D + HRGFGFVTF
Sbjct: 246 NRPKTQSNKTKKIFVGGVSQDTSAEEVKQYFSQFGKVEETVMLMDQQTKRHRGFGFVTFE 305
Query: 136 EEVVADRVSR-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPM 187
E V DRV H I ++V A P + P+ ++ G G P+
Sbjct: 306 HEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVTPTAQQLLQKRIILGNLGLPI 358
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + ++E L YF FG++ DV + KDP RGFGF+TF E D+V +
Sbjct: 168 KLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQEPNSVDKVLKV 227
Query: 147 S-HEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 228 PIHTLDGKKIDPKHATP 244
>gi|219363315|ref|NP_001136724.1| uncharacterized protein LOC100216861 [Zea mays]
gi|194696774|gb|ACF82471.1| unknown [Zea mays]
gi|414883906|tpg|DAA59920.1| TPA: RNA-binding protein [Zea mays]
Length = 469
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 98/233 (42%), Gaps = 63/233 (27%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E + ++ H + G V +A P++D I + + +++G
Sbjct: 58 DATVAERVTIEKHMIDGRMVEAKKAVPRDDH-----------------SIVSKSNTSSIG 100
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+P G G + +KIFVG LP T D R YF +FG I DV V D
Sbjct: 101 SP----------GPGRT-----RKIFVGGLPSNVTEADFRGYFEQFGVITDVVVMYDHNT 145
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD---------AGPSQNFM 173
RGFGF+T+ E D+ +S HE+ G+ V + A P + AG QN+
Sbjct: 146 QRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKKAVPKEQSPGPVARSPAGVGQNYA 205
Query: 174 MNAAETF-------------GGYGGPMRT---YGRMYGS---LDFDDWGYGMG 207
MN +F GGYG MR +G++ G+ L GYGMG
Sbjct: 206 MNRVHSFLNDFNQGYNPNPIGGYG--MRVDGRFGQLSGARNGLSSFGPGYGMG 256
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + E + LR YF RFG + + + +D RGFGFV FA+ VA+RV+
Sbjct: 9 KLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADATVAERVTIE 68
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 69 KHMIDGRMVEAKKAVPRDD 87
>gi|356501604|ref|XP_003519614.1| PREDICTED: uncharacterized protein LOC100814628 [Glycine max]
Length = 477
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 96/232 (41%), Gaps = 62/232 (26%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D + E +++D H + G TV +A P++D
Sbjct: 56 DPSAAERVIMDKHIIDGRTVEAKKAVPRDDQ----------------------------- 86
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
T+ GS +G + KKIFVG LP T D ++YF +FG I DV V D
Sbjct: 87 -QTINRQTGSIHGSPSPGRT--KKIFVGGLPSTITESDFKKYFDQFGTITDVVVMYDHNT 143
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD-DAGPSQ------NFMMN 175
RGFGF+T+ E DRV ++ HE+ G+ V + A P + GP++ N+ +N
Sbjct: 144 QRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPKELSPGPTRSPLIGYNYGLN 203
Query: 176 AAETF-------------GGYGGPMRTYGRM-------YGSLDFDDWGYGMG 207
+F GGYG +R GR G F GYGMG
Sbjct: 204 RTSSFLNSYAQGFNMNPIGGYG--VRMDGRFSPLTSARSGFTPFGSSGYGMG 253
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E L+ YF ++G +++ + +D RGFGFV FA+ A+RV
Sbjct: 7 KLFIGGISWDTDDERLKEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAAERVIMD 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 KHIIDGRTVEAKKAVPRDD 85
>gi|389583621|dbj|GAB66355.1| nucleic acid binding factor [Plasmodium cynomolgi strain B]
Length = 667
Score = 76.3 bits (186), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR- 145
+IFV RLP EA +DL +YFS++G+I+D+YV K+ ++GFGFV+F ++ D+V +
Sbjct: 279 RIFVTRLPFEAGKKDLEKYFSKYGKIVDIYVSKNLSNNKNKGFGFVSFEKQSSMDKVLKD 338
Query: 146 RSHEICGQQVAIDSATPLDD 165
+ H ICG+++ +D A+ D+
Sbjct: 339 KLHIICGKEIVVDVASMRDN 358
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 12/119 (10%)
Query: 49 YNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSR 108
Y + + Y + G P + PG G+ + G K+FV +L T E LR YF
Sbjct: 545 YPPNVVPSGSYRSPGQPFVRKLPG-----GDEWNKRGYKLFVTKLNSVTTIETLRNYFEA 599
Query: 109 FGRILDVYVPKDPKRTGHRGFGFVTF-----AEEVVADRVSRRSHEICGQQVAIDSATP 162
FG I+D+Y+P D RG FVTF +++++++ S+ H I G++V +D A P
Sbjct: 600 FGEIIDIYMPNDVCTNRPRGIAFVTFLDNDCVKKILSNKNSK--HIIDGKEVVVDLADP 656
>gi|195624752|gb|ACG34206.1| RNA-binding protein [Zea mays]
Length = 469
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 98/233 (42%), Gaps = 63/233 (27%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E + ++ H + G V +A P++D I + + +++G
Sbjct: 58 DATVAERVTIEKHMIDGRMVEAKKAVPRDDH-----------------SIVSKSNTSSIG 100
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+P G G + +KIFVG LP T D R YF +FG I DV V D
Sbjct: 101 SP----------GPGRT-----RKIFVGGLPSNVTEADFRGYFEQFGVITDVVVMYDHNT 145
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD---------AGPSQNFM 173
RGFGF+T+ E D+ +S HE+ G+ V + A P + AG QN+
Sbjct: 146 QRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKKAVPKEQSPGPVARSPAGVGQNYA 205
Query: 174 MNAAETF-------------GGYGGPMRT---YGRMYGS---LDFDDWGYGMG 207
MN +F GGYG MR +G++ G+ L GYGMG
Sbjct: 206 MNRVHSFLNDFNQGYNPNPIGGYG--MRVDGRFGQLSGARNGLSSFGPGYGMG 256
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + E + LR YF RFG + + + +D RGFGFV FA+ VA+RV+
Sbjct: 9 KLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADATVAERVTIE 68
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 69 KHMIDGRMVEAKKAVPRDD 87
>gi|270001223|gb|EEZ97670.1| hypothetical protein TcasGA2_TC016215 [Tribolium castaneum]
Length = 443
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VSR 145
K+F+G LP T DLR +F+RFG++++V + D ++ RGFGF++F +E DR VS
Sbjct: 43 KVFLGGLPSNVTETDLRTFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEESVDRCVSE 102
Query: 146 RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 195
+ G+QV I A P D +G ++ M A+ +G P G M G
Sbjct: 103 HFVNLNGKQVEIKKAEPRDGSGGNK---MGGADPSSAWGPPQAPMGMMQG 149
>gi|156098334|ref|XP_001615199.1| nucleic acid binding factor [Plasmodium vivax Sal-1]
gi|148804073|gb|EDL45472.1| nucleic acid binding factor, putative [Plasmodium vivax]
Length = 753
Score = 75.9 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR- 145
+IFV RLP EA +DL +YFS++G+I+D+YV K+ ++GFGFV+F ++ D+V +
Sbjct: 364 RIFVTRLPFEAGKKDLEKYFSKYGKIVDIYVSKNLSNNKNKGFGFVSFEKQSSMDKVLKD 423
Query: 146 RSHEICGQQVAIDSATPLDD 165
+ H ICG+++ +D A+ D+
Sbjct: 424 KLHIICGKEIVVDVASMRDN 443
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 12/119 (10%)
Query: 49 YNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSR 108
Y ++ + Y G P + PG G+ + G K+FV +L T E LR YF
Sbjct: 631 YPPNVAPSGSYRPPGQPFVRKLPG-----GDEWNKRGYKLFVTKLNSVTTIETLRNYFEA 685
Query: 109 FGRILDVYVPKDPKRTGHRGFGFVTF-----AEEVVADRVSRRSHEICGQQVAIDSATP 162
FG I+D+Y+P D RG FVTF +++++++ S+ H I G++V +D A P
Sbjct: 686 FGEIIDIYMPNDVCTNRPRGIAFVTFLDNDCVKKILSNKNSK--HIIDGKEVVVDLADP 742
>gi|189241702|ref|XP_966757.2| PREDICTED: similar to hrp48.1 [Tribolium castaneum]
Length = 400
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VSR 145
K+F+G LP T DLR +F+RFG++++V + D ++ RGFGF++F +E DR VS
Sbjct: 106 KVFLGGLPSNVTETDLRTFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEESVDRCVSE 165
Query: 146 RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 195
+ G+QV I A P D +G ++ M A+ +G P G M G
Sbjct: 166 HFVNLNGKQVEIKKAEPRDGSGGNK---MGGADPSSAWGPPQAPMGMMQG 212
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T ++L+R+FSR+G ++D V K+ + RGFGFVTF++ + V +
Sbjct: 16 KLFVGGLSWETTQDNLQRFFSRYGEVIDCVVMKNAESGRSRGFGFVTFSDPANVNTVLQN 75
Query: 147 S-HEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 76 GPHTLDGRTIDPKPCNP 92
>gi|221055866|ref|XP_002259071.1| nucleic acid binding factor [Plasmodium knowlesi strain H]
gi|193809142|emb|CAQ39844.1| nucleic acid binding factor, putative [Plasmodium knowlesi strain
H]
Length = 760
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR- 145
+IFV RLP EA +DL +YFS++G+I+D+YV K+ ++GFGFV+F ++ D+V +
Sbjct: 372 RIFVTRLPFEAGKKDLEKYFSKYGKIVDIYVSKNLSNNKNKGFGFVSFEKQSSMDKVLKD 431
Query: 146 RSHEICGQQVAIDSATPLD 164
+ H ICG+++ +D A+ D
Sbjct: 432 KLHIICGKEIVVDVASMRD 450
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 59 YAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVP 118
Y + G P + PG G+ + G K+FV +L T E LR YF FG I+D+Y+P
Sbjct: 648 YRSPGQPFVRKLPG-----GDEWNKRGYKLFVTKLNSVTTIETLRNYFEAFGEIIDIYMP 702
Query: 119 KDPKRTGHRGFGFVTF-----AEEVVADRVSRRSHEICGQQVAIDSATP 162
D RG FVTF +++++++ S+ H I G++V +D A P
Sbjct: 703 NDVCTNRPRGIAFVTFLDNDCVKKILSNKNSK--HIIDGKEVVVDLADP 749
>gi|345108301|emb|CBZ41969.1| deleted in azoospermia (Daz)-associated protein 1 [Botryllus
schlosseri]
Length = 333
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VSR 145
KIF+G L Q AT E+++ YFS++G + +V + + H+GFGFVTF E D+ V +
Sbjct: 104 KIFIGGLAQNATEEEVKAYFSQYGSVTEVVFVINKEENRHKGFGFVTFESESAVDQAVGK 163
Query: 146 RSHEICGQQVAIDSATPLDDAGPSQN 171
HEICG++V ATP + +QN
Sbjct: 164 HFHEICGKRVEAKRATPRETMRRNQN 189
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEE-VVADRVSR 145
KIFVG L +E T + LR++FS +G I++ V +D RGFGFV +A+ VA+ +
Sbjct: 9 KIFVGGLTRETTDDMLRQHFSNYGEIVECIVMRDKLTQMSRGFGFVKYADAGAVAEVLKN 68
Query: 146 RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAET 179
R H + +++ TP +N + +T
Sbjct: 69 RPHTLDNKKIDPKPCTPKTIQQQKKNAQIEHTQT 102
>gi|414883901|tpg|DAA59915.1| TPA: hypothetical protein ZEAMMB73_814821 [Zea mays]
Length = 448
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 97/234 (41%), Gaps = 65/234 (27%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E + +D H + G V +A P++D I + + ++ G
Sbjct: 57 DAAVAERVTMDKHTIDGRMVEAKKAVPRDDH-----------------SIVSKSNGSSTG 99
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+P G G + +KIFVG LP T D RRYF +FG I DV V D
Sbjct: 100 SP----------GPGRT-----RKIFVGGLPSSVTEADFRRYFEQFGIITDVVVMYDHNT 144
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDDA---------GPSQNFM 173
RGFGF+T+ E D+ +S HE+ G+ V + A P + + G QN+
Sbjct: 145 QRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKRAVPKEQSPGPVVRSPVGVGQNYA 204
Query: 174 MNAAETF-------------GGYGGPMRTYGRMYGSLD-----FDDW--GYGMG 207
N +F GGYG MR GR YG L F + GYGMG
Sbjct: 205 TNRVHSFLNGFNQGYNPNPIGGYG--MRVDGR-YGLLSGARNGFSSFGPGYGMG 255
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + E + + LR YF RFG + + + +D RGFGFV FA+ VA+RV+
Sbjct: 8 KLFVGGISWETSEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADAAVAERVTMD 67
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 68 KHTIDGRMVEAKKAVPRDD 86
>gi|414591910|tpg|DAA42481.1| TPA: hypothetical protein ZEAMMB73_522608 [Zea mays]
Length = 449
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 99/234 (42%), Gaps = 65/234 (27%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E + + H + G V +A P++D I + +++G
Sbjct: 57 DAAVAERVTTEKHMIDGRMVEAKKAVPRDDH-----------------SIVTKSNASSIG 99
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+P G G + +KIFVG LP T D RRYF +FG I DV V D
Sbjct: 100 SP----------GPGRT-----RKIFVGGLPSNVTEADFRRYFEQFGVITDVVVMYDHNT 144
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDDA-GPS--------QNFM 173
RGFGF+T+ E D+ +S HE+ G+ V + A P + + GP+ QN+
Sbjct: 145 QRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKRAVPKEQSPGPAARSPVGVGQNYA 204
Query: 174 MNAAETF-------------GGYGGPMRTYGRMYGSLD-----FDDW--GYGMG 207
MN +F GGYG +R GR YG + F + GYGMG
Sbjct: 205 MNRVHSFLNGFNQGYNPNPIGGYG--IRVDGR-YGLISGARNGFSSFGPGYGMG 255
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + E + + LR YF RFG + + + +D RGFGFV FA+ VA+RV+
Sbjct: 8 KLFVGGISWETSEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADAAVAERVTTE 67
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 68 KHMIDGRMVEAKKAVPRDD 86
>gi|356552729|ref|XP_003544715.1| PREDICTED: uncharacterized protein LOC100788515 [Glycine max]
Length = 478
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 95/232 (40%), Gaps = 62/232 (26%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D + E +++D H + G TV +A P++D
Sbjct: 56 DPSAAERVIMDKHIIDGRTVEAKKAVPRDDQ----------------------------- 86
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
T+ GS +G + KKIFVG LP T D ++YF +FG I DV V D
Sbjct: 87 -QTINRQSGSIHGSPSPGRT--KKIFVGGLPSTITESDFKKYFDQFGTIADVVVMYDHNT 143
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD-DAGPSQ------NFMMN 175
RGFGF+T+ E DRV ++ HE+ G+ V + A P + GP++ N+ +N
Sbjct: 144 QRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPKELSPGPTRSPLIGYNYGLN 203
Query: 176 AAETF-------------GGYGGPMRTYGRM-------YGSLDFDDWGYGMG 207
F GGYG +R GR G F GYGMG
Sbjct: 204 RTSGFLNSYAQGFNMNPIGGYG--VRMDGRFSPLTSARSGFSPFGSSGYGMG 253
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E L+ YF ++G +++ + +D RGFGFV FA+ A+RV
Sbjct: 7 KLFIGGISWDTDDERLKEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAAERVIMD 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 KHIIDGRTVEAKKAVPRDD 85
>gi|356509793|ref|XP_003523630.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 384
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRM-SHGGYGAYNAYISAATRYAAL 62
D + + + DTH + G TV V +A P+ + + + S GG YN +
Sbjct: 60 DLSAADKALQDTHVILGRTVEVKKAIPRSEQHQHQNPLQSRGGGYYYNNNNNNNDDNNNN 119
Query: 63 GAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPK 122
DH KKIFVG LP + E+ + YF RFGRI DV V +D
Sbjct: 120 SNDYCSDH-----------NVRTKKIFVGGLPAGISEEEFKNYFERFGRITDVVVMQDSV 168
Query: 123 RTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATP 162
RGFGF+TF +EE V + + + H++ G+QV + A P
Sbjct: 169 THRPRGFGFITFESEESVQNVMVKSFHDLNGRQVEVKRAVP 209
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + ++ T L+ +F+++G + D + D RGFGFVTF++ AD+ +
Sbjct: 11 KLFVGGISRDTTEHVLKLHFAKYGVVSDSTISVDRTTRSPRGFGFVTFSDLSAADKALQD 70
Query: 147 SHEICGQQVAIDSATPLDDAGPSQN 171
+H I G+ V + A P + QN
Sbjct: 71 THVILGRTVEVKKAIPRSEQHQHQN 95
>gi|405957161|gb|EKC23392.1| TAR DNA-binding protein 43 [Crassostrea gigas]
Length = 457
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
+ Q + +K+FVGR ++ TAEDLR YF +FG ++DV++PK R F FVTFA+ V
Sbjct: 198 AQQIMNRKVFVGRCTEDMTAEDLRNYFGKFGEVVDVFIPKP-----FRAFAFVTFADPEV 252
Query: 140 ADRVSRRSHEICGQQVAIDSATPLD 164
+ + H I G V I SA P +
Sbjct: 253 SQNLCGEDHIIKGASVHISSAAPKN 277
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
QR I +G LP ++T EDLR+YFS+FG +L V V DP+ +GFGF+ FA+
Sbjct: 115 QRCSDLIVLG-LPWKSTEEDLRKYFSQFGELLMVQVKVDPRTRQSKGFGFIRFADYDSQF 173
Query: 142 RVSRRSHEICGQQVAI 157
+ + H I G+ +
Sbjct: 174 KCMSQRHMIDGRWCDV 189
>gi|47086935|ref|NP_998467.1| heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|44890703|gb|AAH66681.1| Zgc:77052 [Danio rerio]
Length = 309
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L E T E +R YF FG I + +P DPK + RGF F+TF EE ++
Sbjct: 129 KKIFVGGLNPETTEEKIREYFGSFGEIETIELPTDPKTSKRRGFVFITFKEEFAVKKILE 188
Query: 145 RRSHEICGQQVAIDSATP 162
++ H +CG + I A P
Sbjct: 189 KKYHNVCGSKCEIKIAQP 206
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YFS+FG ++D + D RGFGF+ F E DRV +
Sbjct: 46 KMFVGGLSWDTSKKDLKDYFSKFGEVMDCTIKMDSNTGRSRGFGFILFKESDSVDRVLQQ 105
Query: 146 RSHEICGQQV 155
+ H + G+Q+
Sbjct: 106 KEHRLDGRQI 115
>gi|122720941|gb|ABM66456.1| RNA-binding protein [Brassica juncea]
Length = 179
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
+IFV R+P + D RR+F ++G I D+Y+PKD HRG GF+TFA + +
Sbjct: 74 RIFVARIPPSVSESDFRRHFEKYGEITDLYMPKDHNSKQHRGIGFITFATSDSVEDLMED 133
Query: 147 SHEICGQQVAIDSATP 162
+H++ G VA+D ATP
Sbjct: 134 THDLGGTTVAVDRATP 149
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/27 (81%), Positives = 25/27 (92%)
Query: 6 DSVENLMVDTHELGGSTVVVDRATPKE 32
DSVE+LM DTH+LGG+TV VDRATPKE
Sbjct: 125 DSVEDLMEDTHDLGGTTVAVDRATPKE 151
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 102 LRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSAT 161
LR Y S+FG + D V KD RGFG+VTFA A + H + + + + AT
Sbjct: 1 LRDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASSQDAKEALKGEHFLGNRILEVKVAT 60
Query: 162 PLDD 165
P ++
Sbjct: 61 PKEE 64
>gi|356527120|ref|XP_003532161.1| PREDICTED: uncharacterized protein LOC100805131 [Glycine max]
Length = 513
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 98/231 (42%), Gaps = 60/231 (25%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E +++D H + G TV +A P+ DD + + R S G
Sbjct: 90 DPSVAERVIMDKHIIDGRTVEAKKAVPR-DDQQNINRQS--------------------G 128
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+ + PG KKIFVG LP T D + YF +FG I DV V D
Sbjct: 129 SAHVSPGPGRT-----------KKIFVGGLPSTITESDFKTYFDQFGTITDVVVMYDHNT 177
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD-DAGPSQ----------- 170
RGFGF+T+ E DRV ++ HE+ G+ V + A P + GPS+
Sbjct: 178 QRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPKELSPGPSRSPLIGYNYGLT 237
Query: 171 ---NFMMNAAETF-----GGYGGPM------RTYGRMYGSLDFDDWGYGMG 207
N++ + A+ + GGYG M T GR G F + GYGMG
Sbjct: 238 RASNYLNSYAQGYNMSPIGGYGVRMDGRFSPLTSGRS-GLTPFGNTGYGMG 287
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E L+ YF ++G +++ + +D RGFGFV F + VA+RV
Sbjct: 41 KLFIGGISWDTDEERLKEYFGKYGEVIETVIMRDRVTGRARGFGFVVFGDPSVAERVIMD 100
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 101 KHIIDGRTVEAKKAVPRDD 119
>gi|350015551|dbj|GAA42894.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Clonorchis
sinensis]
Length = 292
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 78 GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEE 137
G+S KK+FVG L + E LR Y+S++G I DV V KDP+ RGFGFVTF E
Sbjct: 5 GDSKADQDKKLFVGGLNPKTNEESLRSYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEA 64
Query: 138 VVADRV-SRRSHEICGQQVAIDSATPLDDAGP 168
D+ + R H++ G++V A P ++ P
Sbjct: 65 ASVDKAQANRPHKLDGKEVDSKRAMPREETSP 96
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS- 144
KKIFVG L ++ T +DL YF ++G + D + RGF FVTF + D+V
Sbjct: 103 KKIFVGGLKKDVTNDDLAEYFGQYGTVTDAQIVMAKDTNTSRGFAFVTFDDTDSVDKVIL 162
Query: 145 RRSHEICGQQVAIDSA 160
R H I G + + A
Sbjct: 163 ARPHTINGHKADVRKA 178
>gi|308490851|ref|XP_003107617.1| CRE-MSI-1 protein [Caenorhabditis remanei]
gi|308250486|gb|EFO94438.1| CRE-MSI-1 protein [Caenorhabditis remanei]
Length = 335
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KK+F+G L +T EDL++YF +G++ D + D HRGFGFVTF + VAD+V
Sbjct: 130 KKVFIGGLSATSTLEDLKQYFETYGKVEDAMLMYDKATQRHRGFGFVTFDSDEVADKVCE 189
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRT-------YGRMYGSL 197
HEI G+ V A P + P Q AA YG P T R G+L
Sbjct: 190 IHFHEINGKMVECKKAQPKEVMLPVQLNKSRAAAARNLYGMPPETLLAYAQYLPRFGGNL 249
Query: 198 DFDDWGYGMG 207
+ +G G G
Sbjct: 250 MYPGFGNGFG 259
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + TAE+LR YF RFG + + V +DP RGFGF+TF + D+V +
Sbjct: 42 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNA 101
Query: 146 RSHEICGQQVAIDSATP 162
R HE+ G+++ A P
Sbjct: 102 REHELDGKKIDPKVAFP 118
>gi|357616936|gb|EHJ70495.1| hypothetical protein KGM_10405 [Danaus plexippus]
Length = 441
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVGR ++ TA+DLR YFSRFG + DV+VP+ R FGFVTF + VA +
Sbjct: 205 KVFVGRCTEDMTADDLRDYFSRFGEVTDVFVPRP-----FRAFGFVTFLDPEVAQSLCGE 259
Query: 147 SHEICGQQVAIDSATP 162
H I G V++ SA P
Sbjct: 260 DHVIKGASVSVSSAAP 275
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 81 SQRIGKKIFVGRL-----PQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
++R+ KK+ L P + T E +++YF +FG ++ V + +D K +GFGF+ FA
Sbjct: 109 TKRLEKKLTCSDLICLGLPWKTTEESIKQYFEQFGEVVMVQLKRD-KNGSFKGFGFIRFA 167
Query: 136 EEVVADRVSRRSHEICGQQVAI 157
R + H I G+ V +
Sbjct: 168 TYASQMRALAQRHNIDGRWVDV 189
>gi|242023524|ref|XP_002432182.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Pediculus
humanus corporis]
gi|212517579|gb|EEB19444.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Pediculus
humanus corporis]
Length = 456
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q++ K+FVGR ++ TAEDLR YFS+FG + DV++PK R F FVTF + VA
Sbjct: 188 QQVPCKVFVGRCTEDITAEDLREYFSKFGEVTDVFIPKP-----FRAFAFVTFLDPEVAQ 242
Query: 142 RVSRRSHEICGQQVAIDSATP 162
+ H I G V + +A P
Sbjct: 243 SLCGEDHIIKGTSVHVSNAAP 263
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 67 LYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH 126
L ++ + R E+ + I +G LP + T + LR YF +G +L V KDPK
Sbjct: 88 LLENSTAKTKRMETKLKCSDLIVLG-LPWKTTEQQLREYFETYGEVLMAQVKKDPKSGQS 146
Query: 127 RGFGFVTFAEEVVADRVSRRSHEI 150
+GFGFV F RV + H I
Sbjct: 147 KGFGFVRFGSYEAQARVLTQRHMI 170
>gi|313230121|emb|CBY07825.1| unnamed protein product [Oikopleura dioica]
Length = 422
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV- 143
+KIF+G LP EA E L+ +FSRFG I+D VPKDPK +GFGFVTF D V
Sbjct: 18 ARKIFIGNLPYEADEEMLKNHFSRFGEIVDCVVPKDPKTKFAKGFGFVTFTRGTAVDEVM 77
Query: 144 SRRSHEICGQ 153
+ R H++ G+
Sbjct: 78 TNRPHKVAGR 87
>gi|268564135|ref|XP_002647098.1| C. briggsae CBR-MSI-1 protein [Caenorhabditis briggsae]
Length = 318
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KK+F+G L +T ED+++YF +G++ D + D HRGFGFVTF + VAD+V
Sbjct: 131 KKVFIGGLSATSTLEDMKQYFESYGKVEDAMLMYDKATQRHRGFGFVTFDSDEVADKVCE 190
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRT 189
HEI G+ V A P + P Q AA YG P T
Sbjct: 191 IHFHEINGKMVECKKAQPKEVMLPVQLNKSRAAAARNLYGMPPET 235
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + TAE+LR YF RFG + + V +DP RGFGF+TF E D+V +
Sbjct: 43 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVEPSSVDKVLNA 102
Query: 146 RSHEICGQQVAIDSATP 162
R HE+ G+++ A P
Sbjct: 103 RDHELDGKKIDPKVAFP 119
>gi|255576302|ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223531524|gb|EEF33355.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 478
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 34/173 (19%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E ++VD H + G TV +A P++D +I + G
Sbjct: 56 DPAVAERVIVDKHMIDGRTVEAKKAVPRDDQ-----------------HILNRNTSSIHG 98
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+P G G + KKIFVG L T D ++YF +FG I DV V D
Sbjct: 99 SP----------GPGRT-----KKIFVGGLASTVTDNDFKKYFEQFGNITDVVVMYDHNT 143
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD-DAGPSQNFMM 174
RGFGF+T+ E DRV ++ HE+ G+ V + A P + GPS++ ++
Sbjct: 144 QRPRGFGFITYDSEDAVDRVLHKTFHELNGKMVEVKRAVPKELSPGPSRSPLI 196
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E L+ YFS++G +++ + +D RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVIVD 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD Q+ + + G GP RT G L
Sbjct: 67 KHMIDGRTVEAKKAVPRDD----QHILNRNTSSIHGSPGPGRTKKIFVGGL 113
>gi|341889790|gb|EGT45725.1| hypothetical protein CAEBREN_10423 [Caenorhabditis brenneri]
Length = 311
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KK+F+G L +T ED+++YF +G++ D + D HRGFGFVTF + VAD+V
Sbjct: 123 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMYDKATQRHRGFGFVTFDSDEVADKVCE 182
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRT 189
HEI G+ V A P + P Q AA YG P T
Sbjct: 183 IHFHEINGKMVECKKAQPKEVMLPVQLNKSRAAAARNLYGMPPET 227
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR- 145
K+F+G L + TAE+LR YF RFG + + V +DP RGFGF+TF + D+V
Sbjct: 35 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLHA 94
Query: 146 RSHEICGQQVAIDSATP 162
R HE+ G+++ A P
Sbjct: 95 RDHELDGKKIDPKVAFP 111
>gi|356566592|ref|XP_003551514.1| PREDICTED: uncharacterized protein LOC100794390 [Glycine max]
Length = 479
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 80/173 (46%), Gaps = 34/173 (19%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E +++D H + G TV +A P+ DD + + R S + +A+ G
Sbjct: 56 DPSVAERVIMDKHIIDGRTVEAKKAVPR-DDQQNINRQS-------------GSAHASPG 101
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
PG KKIFVG LP T D + YF +FG I DV V D
Sbjct: 102 -------PGRT-----------KKIFVGGLPSTITESDFKMYFDQFGTITDVVVMYDHNT 143
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD-DAGPSQNFMM 174
RGFGF+T+ E DRV ++ HE+ G+ V + A P + GPS++ ++
Sbjct: 144 QRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPKELSPGPSRSPLI 196
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E L+ YF ++G +++ + +D RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWDTDEERLKDYFGKYGEVIEAVIMRDRVTGRARGFGFVVFADPSVAERVIMD 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 KHIIDGRTVEAKKAVPRDD 85
>gi|332029556|gb|EGI69445.1| TAR DNA-binding protein 43 [Acromyrmex echinatior]
Length = 469
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q++ K+FVGR ++ TA+DLR YFS+FG + DV++PK R F FVTF + VA
Sbjct: 188 QQVPCKVFVGRCTEDLTADDLREYFSKFGEVTDVFIPKP-----FRAFSFVTFLDPEVAQ 242
Query: 142 RVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGP 186
+ H I G V + +A P + + GG G P
Sbjct: 243 SLCGEDHIIKGVSVHVSNAAPKSEGNNKNFNNQVNSNMRGGRGAP 287
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E+ R I +G LP + T ++LR YF FG +L V KD K +GFGF+ F
Sbjct: 98 RMETKLRCTDLIVLG-LPWKTTEQNLREYFETFGEVLMAQVKKDAKSGQSKGFGFIRFGS 156
Query: 137 EVVADRVSRRSHEICGQQVAI 157
R + H I G+ +
Sbjct: 157 YESQLRCLAQRHMIDGRWCDV 177
>gi|339243191|ref|XP_003377521.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316973670|gb|EFV57234.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 231
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG L T ED++ YF+++GRI D + D HRGFGF+TF E+VV V
Sbjct: 6 KKIFVGGLSASTTLEDMKNYFTQYGRIEDSMLMFDKSTNRHRGFGFITFDNEDVVEKVVE 65
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGR 192
HEI G+ V A P + P Q N A + YGG YG
Sbjct: 66 IHFHEINGKMVECKKAQPKEVMLPVQ-IAKNRAFSRKFYGGLADLYGN 112
>gi|391331401|ref|XP_003740135.1| PREDICTED: TAR DNA-binding protein 43-like [Metaseiulus
occidentalis]
Length = 479
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 78 GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEE 137
G++S+ + +K+FVGR ++ TA+DLR YFS+FG + DV++PK R F FVTF +
Sbjct: 191 GQASE-LSRKVFVGRCTEDLTADDLRDYFSKFGEVTDVFIPKP-----FRAFAFVTFVDA 244
Query: 138 VVADRVSRRSHEICGQQVAIDSATPLDD 165
VA + H I G + + +A P +D
Sbjct: 245 EVAQSLCGEDHIIKGTSIHVSNAVPKND 272
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+ V LP + T ++LR+YF FG +L V KDPK +GFGF+ F+ RV +
Sbjct: 114 LIVLGLPWKTTEQELRQYFEAFGEVLMAQVKKDPKTQQSKGFGFIRFSSYESQIRVLSKR 173
Query: 148 HEICGQ 153
H I G+
Sbjct: 174 HMIDGR 179
>gi|399218473|emb|CCF75360.1| unnamed protein product [Babesia microti strain RI]
Length = 518
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 52 YISAATRYAALGAPTLYD--HPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRF 109
Y S A Y P YD P + S+R+ K+FVGR+ + T +R YF RF
Sbjct: 390 YSSTAQSYNNNYEPQGYDPSRPTTQGSDTLESKRLKNKLFVGRMRNDTTVATMRNYFERF 449
Query: 110 GRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS--HEICGQQVAI 157
G ++D Y+PKDPK +GFGF++F E V + + H I G++V +
Sbjct: 450 GELIDAYIPKDPKTQKGKGFGFISFHNETSVRAVLQATYKHVIDGREVRL 499
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 78 GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDP-KRTGHRGFGFVTFA- 135
G+ R +IFV R+P EAT++D+ YF +FG + D Y PK P K ++GFGF++F
Sbjct: 114 GDRVNRDRYRIFVTRIPFEATSDDIENYFKQFGEVEDAYCPKQPGKAHLNKGFGFISFKN 173
Query: 136 EEVVADRVSRRSHEICGQQVAIDSAT 161
+EV+ + R H I G+++ +D AT
Sbjct: 174 DEVLQAVFNARPHTILGREIVVDKAT 199
>gi|307166910|gb|EFN60814.1| TAR DNA-binding protein 43 [Camponotus floridanus]
Length = 284
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q++ K+FVGR ++ TA+DLR YFS+FG + DV++PK R F FVTF + VA
Sbjct: 3 QQVPCKVFVGRCTEDLTADDLRDYFSKFGEVTDVFIPKP-----FRAFSFVTFLDPEVAQ 57
Query: 142 RVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGP 186
+ H I G V + +A P + + GG G P
Sbjct: 58 SLCGEDHIIKGVSVHVSNAAPKSEGNNKNFNNQVNSNMRGGRGAP 102
>gi|345490453|ref|XP_001602436.2| PREDICTED: TAR DNA-binding protein 43-like [Nasonia vitripennis]
Length = 476
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q++ K+FVGR ++ TA+DLR YFS+FG + DV++PK R F FVTF + VA
Sbjct: 187 QQVPCKVFVGRCTEDLTADDLRDYFSKFGEVTDVFIPKP-----FRAFSFVTFLDPEVAQ 241
Query: 142 RVSRRSHEICGQQVAIDSATPLDDAGPSQNF 172
+ H I G V + +A P + NF
Sbjct: 242 SLCGEDHIIKGVSVHVSNAAPKSEGNNRTNF 272
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E+ R I +G LP + T ++LR YF FG +L V KD K +GFGF+ F
Sbjct: 97 RMETKLRCTDLIVLG-LPWKTTEQNLREYFETFGEVLMAQVKKDAKSGQSKGFGFIRFGS 155
Query: 137 EVVADRVSRRSHEICGQQVAI 157
R + H I G+ +
Sbjct: 156 YESQLRCLAQRHMIDGRWCDV 176
>gi|322780873|gb|EFZ10102.1| hypothetical protein SINV_16596 [Solenopsis invicta]
Length = 286
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q++ K+FVGR ++ TA+DLR YFS+FG + DV++PK R F FVTF + VA
Sbjct: 5 QQVPCKVFVGRCTEDLTADDLRDYFSKFGEVTDVFIPKP-----FRAFSFVTFLDPEVAQ 59
Query: 142 RVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGP 186
+ H I G V + +A P + + GG G P
Sbjct: 60 SLCGEDHIIKGVSVHVSNAAPKSEGNNKNFNNQVNSNMRGGRGAP 104
>gi|17554332|ref|NP_497799.1| Protein MSI-1 [Caenorhabditis elegans]
gi|10047307|dbj|BAB13470.1| neural RNA-binding protein MSI-1 [Caenorhabditis elegans]
gi|18376536|emb|CAA84667.2| Protein MSI-1 [Caenorhabditis elegans]
Length = 320
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KK+F+G L +T ED+++YF +G++ D + D HRGFGFVTF + VAD+V
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRT 189
HEI G+ V A P + P Q AA YG P T
Sbjct: 194 IHFHEINGKMVECKKAQPKEVMLPVQLNKSRAAAARNLYGMPPET 238
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + TAE+LR YF RFG + + V +DP RGFGF+TF + D+V +
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query: 146 RSHEICGQQVAIDSATP 162
R HE+ G+++ A P
Sbjct: 106 REHELDGKKIDPKVAFP 122
>gi|115473043|ref|NP_001060120.1| Os07g0584500 [Oryza sativa Japonica Group]
gi|38175737|dbj|BAC55617.2| putative heterogeneous nuclear ribonucleoprotein A1 [Oryza sativa
Japonica Group]
gi|113611656|dbj|BAF22034.1| Os07g0584500 [Oryza sativa Japonica Group]
gi|215695373|dbj|BAG90564.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 472
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 100/233 (42%), Gaps = 64/233 (27%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E + +D H + G V +A P++D I++ +++G
Sbjct: 56 DAGVAERVTMDKHMIDGRMVEAKKAVPRDDQ-----------------SITSKNNGSSIG 98
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+P G G + +KIFVG L T + RRYF +FG I DV V D
Sbjct: 99 SP----------GPGRT-----RKIFVGGLASNVTEVEFRRYFEQFGVITDVVVMYDHNT 143
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDDA-GPS-------QNFMM 174
RGFGF+T+ E D+ ++ HE+ G+ V + A P + + GP+ QN+ M
Sbjct: 144 QRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPKEQSPGPAARSPAGGQNYAM 203
Query: 175 NAAETF-------------GGYGGPMRTYGRMYGSLD-----FDDW--GYGMG 207
+ +F GGYG MR GR YG L F + GYGMG
Sbjct: 204 SRVHSFLNGFNQGYNPNPIGGYG--MRVDGR-YGLLTGARNGFSSFGPGYGMG 253
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + E + LR YFSRFG + + + +D RGFGFV F + VA+RV+
Sbjct: 7 KLFVGGISWETDEDRLREYFSRFGEVTEAVIMRDRNTGRARGFGFVVFTDAGVAERVTMD 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 KHMIDGRMVEAKKAVPRDD 85
>gi|218199915|gb|EEC82342.1| hypothetical protein OsI_26646 [Oryza sativa Indica Group]
Length = 472
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 100/233 (42%), Gaps = 64/233 (27%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E + +D H + G V +A P++D I++ +++G
Sbjct: 56 DAGVAERVTMDKHMIDGRMVEAKKAVPRDDQ-----------------SITSKNNGSSIG 98
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+P G G + +KIFVG L T + RRYF +FG I DV V D
Sbjct: 99 SP----------GPGRT-----RKIFVGGLASNVTEVEFRRYFEQFGVITDVVVMYDHNT 143
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDDA-GPS-------QNFMM 174
RGFGF+T+ E D+ ++ HE+ G+ V + A P + + GP+ QN+ M
Sbjct: 144 QRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPKEQSPGPAARSPAGGQNYAM 203
Query: 175 NAAETF-------------GGYGGPMRTYGRMYGSLD-----FDDW--GYGMG 207
+ +F GGYG MR GR YG L F + GYGMG
Sbjct: 204 SRVHSFLNGFNQGYNPNPIGGYG--MRVDGR-YGLLTGARNGFSSFGPGYGMG 253
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + E + LR YF RFG + + + +D RGFGFV F + VA+RV+
Sbjct: 7 KLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRNTGRARGFGFVVFTDAGVAERVTMD 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 KHMIDGRMVEAKKAVPRDD 85
>gi|224129106|ref|XP_002320502.1| predicted protein [Populus trichocarpa]
gi|222861275|gb|EEE98817.1| predicted protein [Populus trichocarpa]
Length = 479
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T D + YF +FG I+DV V D RGFGF+TF E D+V
Sbjct: 107 KKIFVGGLASTVTENDFKNYFDQFGTIIDVVVMYDHNTQRPRGFGFITFDSEEAVDKVLM 166
Query: 146 RS-HEICGQQVAIDSATPLD-DAGPSQ------NFMMNAAETF 180
R+ HE+ G+ V + A P + GPS+ N+ +N +F
Sbjct: 167 RTFHELNGKMVEVKRAVPKELSPGPSRSPLGGYNYGLNRVNSF 209
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E L+ YF FG +++ + KD RGFGFV FA+ VA+RV +
Sbjct: 7 KLFIGGISWDTDEERLKGYFRSFGEVVEAVIMKDRTTGRARGFGFVVFADPAVAERVIKE 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMM-NAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD QN + N+ + GP RT G L
Sbjct: 67 KHSIDGRMVEAKKAVPRDD----QNILNRNSGGSIHSSPGPGRTKKIFVGGL 114
>gi|449446702|ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
210-like [Cucumis sativus]
Length = 2257
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 75 YGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVT 133
Y + E +R KIFVG LP+E T+ ++F +G I D + KD ++TGH RGFGFVT
Sbjct: 1910 YYKREGRRRFNVKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKD-RKTGHPRGFGFVT 1968
Query: 134 FAEEVVADRVSRRSHEICGQQVAIDSATP 162
+A+ V D+V +H I G+QV I P
Sbjct: 1969 YADPSVVDKVIEDTHIINGKQVEIKRTIP 1997
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 77 RGESSQR--IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF 134
+G SS R KKIFVG +P ++ R +F ++G + + + +D + RGFGF+TF
Sbjct: 1998 KGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITF 2057
Query: 135 AEEVVADRVSRRSH--EICGQQVAIDSA 160
E D + + E+ G QV I A
Sbjct: 2058 ETEQAVDDLLANGNRLEMAGSQVEIKKA 2085
>gi|449463715|ref|XP_004149577.1| PREDICTED: uncharacterized protein LOC101220541 [Cucumis sativus]
gi|449517233|ref|XP_004165650.1| PREDICTED: uncharacterized protein LOC101224873 [Cucumis sativus]
Length = 480
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 68/160 (42%), Gaps = 33/160 (20%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E +++D H + G TV +A PK+D
Sbjct: 56 DPGVAERVILDKHVIDGRTVEAKKAVPKDDQ----------------------------- 86
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
L GS +G S + KKIFVG L T D ++YF +FG I DV V D
Sbjct: 87 -NMLNRSSGSIHGSPSSGRT--KKIFVGGLASTVTEADFQKYFDQFGTITDVVVMYDHST 143
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP 162
RGFGF+T+ E DRV ++ HE+ G+ V + A P
Sbjct: 144 QRPRGFGFITYDSEECVDRVLHKTFHELNGKMVEVKRAIP 183
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E LR YF +G +++ + +D RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWDTDEERLREYFGHYGEVVEAVIMRDRTTGRARGFGFVVFADPGVAERVILD 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD QN + ++ + G RT G L
Sbjct: 67 KHVIDGRTVEAKKAVPKDD----QNMLNRSSGSIHGSPSSGRTKKIFVGGL 113
>gi|170060137|ref|XP_001865670.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
gi|167878677|gb|EDS42060.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
Length = 402
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G LP T DLR +FSR+G +++V + D ++ RGFGF++F E +R +
Sbjct: 110 KVFLGGLPPNITETDLRSFFSRYGNVMEVVIMYDQEKKKSRGFGFLSFENEAAVERATAE 169
Query: 147 SH-EICGQQVAIDSATPLDDAGPSQNFMMNA 176
I G+QV I A P D +G N MNA
Sbjct: 170 HFVNISGKQVEIKKAEPRDGSG--NNNSMNA 198
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L E T E+L+RYF R+G ++D V K+ + RGFGFVTFA+ E V +
Sbjct: 20 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERALEN 79
Query: 146 RSHEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 80 GPHTLDGRTIDPKPCNP 96
>gi|297803432|ref|XP_002869600.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315436|gb|EFH45859.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 81/181 (44%), Gaps = 28/181 (15%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E +++D H + G TV +A P++D R+A
Sbjct: 65 DPSVAERVIMDKHIIDGRTVEAKKAVPRDDQ-------------------QVLKRHA--- 102
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+P P S G G ++ KKIFVG LP T + + YF +FG I DV V D
Sbjct: 103 SPMHLISP-SHGGNGGGART--KKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNT 159
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP--LDDAGPSQNFMMNAAETF 180
RGFGF+TF E D V ++ HE+ G+ V + A P L P+++ ++ A +
Sbjct: 160 QRPRGFGFITFDSEESVDMVLHKTFHELNGKMVEVKRAVPKELSSTTPNRSPLIGYANNY 219
Query: 181 G 181
G
Sbjct: 220 G 220
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 12/126 (9%)
Query: 79 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEV 138
ES+ +GK +F+G + + E L+ YF ++G +++ + +D RGFGF+ FA+
Sbjct: 9 ESASDLGK-LFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPS 67
Query: 139 VADRVSRRSHEICGQQVAIDSATPLDD-------AGPSQNFMMNAAETFGGYGGPMRTYG 191
VA+RV H I G+ V A P DD A P M + + GG GG RT
Sbjct: 68 VAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASP----MHLISPSHGGNGGGARTKK 123
Query: 192 RMYGSL 197
G L
Sbjct: 124 IFVGGL 129
>gi|389610037|dbj|BAM18630.1| heterogeneous nuclear ribonucleoprotein 27c [Papilio xuthus]
Length = 318
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVGR ++ TA+DLR YFS FG + DV+VP+ R FGFVTF + VA +
Sbjct: 206 KVFVGRCTEDMTADDLREYFSSFGEVTDVFVPR-----PFRAFGFVTFLDPEVAQSLCGE 260
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNF 172
H I G V++ SA P +QN+
Sbjct: 261 DHVIKGASVSVSSAAPKIKNKSNQNW 286
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 81 SQRIGKKIFVGRL-----PQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
++R+ KK+ L P ++T E +++YF +FG ++ V + KD K +GFGF+ FA
Sbjct: 110 TKRLEKKLTCSDLICLGLPWKSTEESIKQYFEQFGEVVMVQLKKD-KNGSFKGFGFIRFA 168
Query: 136 EEVVADRVSRRSHEICGQQVAI 157
R + H I G+ V +
Sbjct: 169 TYASQMRALAQRHNIDGRWVDV 190
>gi|357459939|ref|XP_003600251.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
gi|355489299|gb|AES70502.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
Length = 481
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 34/174 (19%)
Query: 3 KDQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAAL 62
D E +++D H + G TV +A P+ DD + + R + +
Sbjct: 55 SDPAVAERVIIDKHIIDGRTVEAKKAVPR-DDQQNINRQTG----------------SVQ 97
Query: 63 GAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPK 122
G+P G G + KKIFVG LP T D + YF +FG I DV V D
Sbjct: 98 GSP----------GPGRT-----KKIFVGGLPSTITESDFKMYFDQFGTITDVVVMYDHN 142
Query: 123 RTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD-DAGPSQNFMM 174
RGFGF+T+ E DRV ++ HE+ G+ V + A P + GP+++ ++
Sbjct: 143 TQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPKELSPGPTRSPLI 196
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E L+ YF+ +G +++ + +D RGFGFV F++ VA+RV
Sbjct: 7 KLFIGGISWDTDEERLKEYFATYGEVIEAVIMRDRATGRARGFGFVVFSDPAVAERVIID 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 KHIIDGRTVEAKKAVPRDD 85
>gi|209156106|gb|ACI34285.1| DAZ-associated protein 1 [Salmo salar]
Length = 436
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG +P +LR YF+RFG + +V + D ++ RGFGF+TF AE+ V V+
Sbjct: 113 KKIFVGGIPHNCGEPELREYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVN 172
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQ 170
H+I G++V + A P D P Q
Sbjct: 173 MHFHDIMGKKVEVKKAEPRDSNAPGQ 198
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 146 RSHEICGQQVAIDSATP 162
+ H + G+ + TP
Sbjct: 72 KPHNLDGRNIDPKPCTP 88
>gi|429892774|gb|AGA18932.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 417
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+F+G LP T DLR +F+R+G++ +V + D ++ RGFGF++F EE + V+
Sbjct: 91 GYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVT 150
Query: 145 R-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 199
R + G+QV I A P D +G + +G G +G + ++
Sbjct: 151 NERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 206
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L RYF RFG I+D V K+ + RGFGFVTFA+ + V +
Sbjct: 4 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 63
Query: 147 S-HEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 64 GPHTLDGRTIDPKPCNP 80
>gi|312377573|gb|EFR24379.1| hypothetical protein AND_11086 [Anopheles darlingi]
Length = 405
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G LP T DLR +F R+G +++V + D ++ RGFGF++F EV +R +
Sbjct: 103 KVFLGGLPPNITETDLRSFFCRYGNVMEVVIMYDQEKKKSRGFGFLSFENEVAVERATTD 162
Query: 147 SH-EICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 195
I G+QV + A P D S N M + +G P G+M G
Sbjct: 163 HFVHISGKQVEVKKAEPRDGNQNSNNSMSTDSYQWGSPQAPPMGNGQMGG 212
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VSR 145
K+FVG L E T E+L+RYFSR+G ++D V K+ + RGFGFVTFA+ DR +
Sbjct: 13 KLFVGGLSWETTHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVDRALEN 72
Query: 146 RSHEICGQQVAIDSATPLDDAGP 168
H + G+ + P P
Sbjct: 73 GPHTLDGRTIDPKPCNPRSQHKP 95
>gi|429892780|gb|AGA18935.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 421
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+F+G LP T DLR +F+R+G++ +V + D ++ RGFGF++F EE + V+
Sbjct: 95 GYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVT 154
Query: 145 R-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 199
R + G+QV I A P D +G + +G G +G + ++
Sbjct: 155 NERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 210
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L RYF RFG I+D V K+ + RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 147 S-HEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|429892776|gb|AGA18933.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 421
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+F+G LP T DLR +F+R+G++ +V + D ++ RGFGF++F EE + V+
Sbjct: 95 GYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVT 154
Query: 145 R-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 199
R + G+QV I A P D +G + +G G +G + ++
Sbjct: 155 NERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 210
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L RYF RFG I+D V K+ + RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 147 S-HEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|429892772|gb|AGA18931.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 420
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+F+G LP T DLR +F+R+G++ +V + D ++ RGFGF++F EE + V+
Sbjct: 94 GYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVT 153
Query: 145 R-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 199
R + G+QV I A P D +G + +G G +G + ++
Sbjct: 154 NERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 209
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L RYF RFG I+D V K+ + RGFGFVTFA+ + V +
Sbjct: 7 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 66
Query: 147 S-HEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 67 GPHTLDGRTIDPKPCNP 83
>gi|307214018|gb|EFN89225.1| Heterogeneous nuclear ribonucleoprotein 27C [Harpegnathos saltator]
Length = 263
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VSR 145
K+F+G LP T DLR YF+RFG++++V + D ++ RGFGF++F +E DR V+
Sbjct: 60 KVFLGGLPSNVTETDLRSYFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEEAVDRCVAE 119
Query: 146 RSHEICGQQVAIDSATPLDDA 166
+ G+QV I A P D +
Sbjct: 120 HFVNLNGKQVEIKRAEPRDSS 140
>gi|443686443|gb|ELT89721.1| hypothetical protein CAPTEDRAFT_175992 [Capitella teleta]
Length = 444
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 6/85 (7%)
Query: 79 ESSQRI-GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEE 137
E +Q I +K+F+GR ++ TA+DLR YF++FG ++DV++PK R F FVTFA+
Sbjct: 183 EGTQHIVNRKVFIGRCTEDMTADDLRSYFNKFGEVVDVFIPKP-----FRAFAFVTFADP 237
Query: 138 VVADRVSRRSHEICGQQVAIDSATP 162
VA + H I G V + +A P
Sbjct: 238 EVAHALCGEDHIIKGASVHVSNAAP 262
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+ V LP ++T +DL+ YFS+FG +L V V +D K +GFGFV FA+ +
Sbjct: 107 LIVLGLPWKSTEDDLQAYFSQFGELLMVQVKRDLKTGQSKGFGFVRFADYEAQLKCLAVR 166
Query: 148 HEICGQQVAI 157
H I G+ +
Sbjct: 167 HMIDGRWCDV 176
>gi|307170451|gb|EFN62721.1| Heterogeneous nuclear ribonucleoprotein 27C [Camponotus floridanus]
Length = 275
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VSR 145
K+F+G LP T DLR YF+RFG++++V + D ++ RGFGF++F +E DR V+
Sbjct: 60 KVFLGGLPSNVTETDLRSYFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEEAVDRCVAE 119
Query: 146 RSHEICGQQVAIDSATPLDDA 166
+ G+QV I A P D +
Sbjct: 120 HFVNLNGKQVEIKRAEPRDSS 140
>gi|429892784|gb|AGA18937.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 420
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+F+G LP T DLR +F+R+G++ +V + D ++ RGFGF++F EE + V+
Sbjct: 94 GYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVT 153
Query: 145 R-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 199
R + G+QV I A P D +G + +G G +G + ++
Sbjct: 154 NERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 209
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L RYF RFG I+D V K+ + RGFGFVTFA+ + V +
Sbjct: 7 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 66
Query: 147 S-HEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 67 GPHTLDGRTIDPKPCNP 83
>gi|429892778|gb|AGA18934.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 421
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+F+G LP T DLR +F+R+G++ +V + D ++ RGFGF++F EE + V+
Sbjct: 95 GYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVT 154
Query: 145 R-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 199
R + G+QV I A P D +G + +G G +G + ++
Sbjct: 155 NERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 210
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L RYF RFG I+D V K+ + RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 147 S-HEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|429892786|gb|AGA18938.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 418
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+F+G LP T DLR +F+R+G++ +V + D ++ RGFGF++F EE + V+
Sbjct: 92 GYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVT 151
Query: 145 R-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 199
R + G+QV I A P D +G + +G G +G + ++
Sbjct: 152 NERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 207
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FV L E T E+L RYF RFG I+D V K+ + RGFGFVTFA+ + V +
Sbjct: 5 KLFVYGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 64
Query: 147 S-HEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 65 GPHTLDGRTIDPKPCNP 81
>gi|429892782|gb|AGA18936.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 420
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+F+G LP T DLR +F+R+G++ +V + D ++ RGFGF++F EE + V+
Sbjct: 94 GYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVT 153
Query: 145 R-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 199
R + G+QV I A P D +G + +G G +G + ++
Sbjct: 154 NERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 209
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FV L E T E+L RYF RFG I+D V K+ + RGFGFVTFA+ + V +
Sbjct: 7 KLFVDGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 66
Query: 147 S-HEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 67 GPHTLDGRTIDPKPCNP 83
>gi|17136728|ref|NP_476869.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform A
[Drosophila melanogaster]
gi|24582366|ref|NP_723228.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform B
[Drosophila melanogaster]
gi|24582368|ref|NP_723229.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform C
[Drosophila melanogaster]
gi|281364530|ref|NP_001162897.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform D
[Drosophila melanogaster]
gi|281364532|ref|NP_001162898.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform E
[Drosophila melanogaster]
gi|386769237|ref|NP_001245917.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform F
[Drosophila melanogaster]
gi|386769239|ref|NP_001245918.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform G
[Drosophila melanogaster]
gi|386769241|ref|NP_001245919.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform H
[Drosophila melanogaster]
gi|76803817|sp|P48809.2|RB27C_DROME RecName: Full=Heterogeneous nuclear ribonucleoprotein 27C;
Short=Hrb27-C; AltName: Full=HRP48.1; AltName:
Full=hnRNP 48
gi|7297190|gb|AAF52456.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform A
[Drosophila melanogaster]
gi|7297191|gb|AAF52457.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform B
[Drosophila melanogaster]
gi|17862734|gb|AAL39844.1| LD46853p [Drosophila melanogaster]
gi|21711665|gb|AAM75023.1| GH26816p [Drosophila melanogaster]
gi|22945819|gb|AAN10605.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform C
[Drosophila melanogaster]
gi|66804007|gb|AAY56657.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
gi|272406922|gb|ACZ94188.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform D
[Drosophila melanogaster]
gi|272406923|gb|ACZ94189.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform E
[Drosophila melanogaster]
gi|383291369|gb|AFH03591.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform F
[Drosophila melanogaster]
gi|383291370|gb|AFH03592.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform G
[Drosophila melanogaster]
gi|383291371|gb|AFH03593.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform H
[Drosophila melanogaster]
Length = 421
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+F+G LP T DLR +F+R+G++ +V + D ++ RGFGF++F EE + V+
Sbjct: 95 GYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVT 154
Query: 145 R-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 199
R + G+QV I A P D +G + +G G +G + ++
Sbjct: 155 NERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 210
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L RYF RFG I+D V K+ + RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 147 S-HEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|242046120|ref|XP_002460931.1| hypothetical protein SORBIDRAFT_02g037690 [Sorghum bicolor]
gi|241924308|gb|EER97452.1| hypothetical protein SORBIDRAFT_02g037690 [Sorghum bicolor]
Length = 471
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 98/233 (42%), Gaps = 64/233 (27%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E + +D H + G V +A P++D I++ +++G
Sbjct: 56 DSGIAERVTMDKHMIDGRMVEAKKAVPRDDQ-----------------SIASKNNGSSIG 98
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+P G G + +KIFVG L T + RRYF +FG I DV V D
Sbjct: 99 SP----------GPGRT-----RKIFVGGLASNVTEVEFRRYFEQFGVITDVVVMYDHNT 143
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDDA-GP-------SQNFMM 174
RGFGF+T+ E D+ ++ HE+ G+ V + A P + + GP QN+ M
Sbjct: 144 QRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPKEQSPGPIARSPVGGQNYAM 203
Query: 175 NAAETF-------------GGYGGPMRTYGRMYGSLD-----FDDW--GYGMG 207
+ F GGYG MR GR YG L F + GYGMG
Sbjct: 204 SRVHNFLNGFNQGYNPNPLGGYG--MRVDGR-YGLLTGARNGFSSFGPGYGMG 253
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + E + LR YF RFG + + + +D RGFGFV FA+ +A+RV+
Sbjct: 7 KLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTMD 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 KHMIDGRMVEAKKAVPRDD 85
>gi|224061141|ref|XP_002300356.1| predicted protein [Populus trichocarpa]
gi|222847614|gb|EEE85161.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 34/173 (19%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E ++++ H + G TV +A P++D +I + + G
Sbjct: 56 DPIVAERVIMEKHVVDGRTVEAKKAVPRDDQ-----------------HILSRNTSSIHG 98
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+P G G + KKIFVG L T D ++YF +FG I DV V D
Sbjct: 99 SP----------GPGRT-----KKIFVGGLASTVTENDFKKYFEQFGIITDVVVMYDHNT 143
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD-DAGPSQNFMM 174
RGFGF+T+ E DRV ++ HE+ G+ V + A P + GPS++ +M
Sbjct: 144 LRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPKELSPGPSRSPLM 196
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E L+ YFS++G +++ + +D RGFGFV FA+ +VA+RV
Sbjct: 7 KLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRVTGRARGFGFVVFADPIVAERVIME 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H + G+ V A P DD Q+ + + G GP RT G L
Sbjct: 67 KHVVDGRTVEAKKAVPRDD----QHILSRNTSSIHGSPGPGRTKKIFVGGL 113
>gi|89257474|gb|ABD64965.1| hypothetical protein 25.t00002 [Brassica oleracea]
Length = 445
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T + ++YF++FG I DV V D + RGFGF+++ E DRV R
Sbjct: 103 KKIFVGGLASSVTEAEFKKYFAQFGTITDVVVMYDQRTQRPRGFGFISYESEDAVDRVLR 162
Query: 146 RS-HEICGQQVAIDSATPLDDAGPSQNFM 173
R+ HE+ G+ V + A P D P +N M
Sbjct: 163 RTFHELNGKMVEVKLAVPKD---PVRNQM 188
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + E T + LR YF FG +L+ + KD RGFGF+ FA+ VA+RV
Sbjct: 7 KLFIGGISWETTEDRLRDYFQSFGEVLEAVIMKDRSTGRARGFGFLVFADPNVAERVVLL 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 RHVIDGKLVEAKKAVPRDD 85
>gi|348523119|ref|XP_003449071.1| PREDICTED: DAZ-associated protein 1-like [Oreochromis niloticus]
Length = 435
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG +P +LR YF+RFG + +V + D ++ RGFGF+TF AE+ V V+
Sbjct: 113 KKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVN 172
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQ 170
H+I G++V + A P D P Q
Sbjct: 173 MHFHDIMGKKVEVKKAEPRDSKAPGQ 198
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 146 RSHEICGQQVAIDSATP 162
+ H + G+ + TP
Sbjct: 72 KPHNLDGRNIDPKPCTP 88
>gi|410921768|ref|XP_003974355.1| PREDICTED: DAZ-associated protein 1-like [Takifugu rubripes]
Length = 435
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG +P +LR YF+RFG + +V + D ++ RGFGF+TF AE+ V V+
Sbjct: 113 KKIFVGGIPHNCGEPELRDYFNRFGAVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVN 172
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQ 170
H+I G++V + A P D P Q
Sbjct: 173 MHFHDIMGKKVEVKKAEPRDSKAPGQ 198
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 146 RSHEICGQQVAIDSATP 162
+ H + G+ + TP
Sbjct: 72 KPHNLDGRNIDPKPCTP 88
>gi|297796435|ref|XP_002866102.1| hypothetical protein ARALYDRAFT_495641 [Arabidopsis lyrata subsp.
lyrata]
gi|297311937|gb|EFH42361.1| hypothetical protein ARALYDRAFT_495641 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 28/164 (17%)
Query: 9 ENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAPTLY 68
E ++++ H + G TV +A P++D R+A+ P
Sbjct: 61 ERVIMEKHIIDGRTVEAKKAVPRDDQ-------------------QVLKRHAS---PIQL 98
Query: 69 DHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRG 128
P G G + KKIFVG LP T E+ + YF +FG I DV V D RG
Sbjct: 99 MSPVHGGGGGRT-----KKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRG 153
Query: 129 FGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDDAGPSQN 171
FGF+TF + DRV ++ HE+ G+ V + A P + + S N
Sbjct: 154 FGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAVPKETSPVSNN 197
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E LR YFS +G +++ + +D RGFGF+ FA+ V++RV
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIME 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 KHIIDGRTVEAKKAVPRDD 85
>gi|225460779|ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267443 [Vitis vinifera]
Length = 478
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 34/205 (16%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E +++D H + G TV +A P++D
Sbjct: 56 DPAVAERVVMDKHMIDGRTVEAKKAVPRDDQH---------------------------- 87
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
L + GS +G + KKIFVG L T D ++YF +FG I DV V D
Sbjct: 88 --LLNRNTGSIHGSPGPGRT--KKIFVGGLASTVTESDFKKYFDQFGTINDVVVMYDHNT 143
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDDA-GPSQNFMMNAAETFG 181
RGFGF+T+ E +RV ++ HE+ G+ V + A P + + GPS++ ++ G
Sbjct: 144 QRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKRAVPKEHSPGPSRSPLVGYNYGLG 203
Query: 182 GYGGPMRTYGRMYGSLDFDDWGYGM 206
+ YG+ Y +G M
Sbjct: 204 RNNNFLNNYGQGYNMSSVGSYGIRM 228
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + + L+ YF +G +++ + +D RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVMD 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD Q+ + + G GP RT G L
Sbjct: 67 KHMIDGRTVEAKKAVPRDD----QHLLNRNTGSIHGSPGPGRTKKIFVGGL 113
>gi|11042|emb|CAA44505.1| hrp48.1 [Drosophila melanogaster]
Length = 385
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+F+G LP T DLR +F+R+G++ +V + D ++ RGFGF++F EE + V+
Sbjct: 95 GYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVT 154
Query: 145 R-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 199
R + G+QV I A P D +G + +G G +G + ++
Sbjct: 155 NERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 210
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L RYF RFG I+D V K+ + RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 147 S-HEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|426229395|ref|XP_004008776.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 2
[Ovis aries]
Length = 332
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLE 213
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H I G + I A P +
Sbjct: 214 KKFHTISGSKCEIKVAQPKE 233
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 131 KEHRLDGRVI 140
>gi|157118269|ref|XP_001653144.1| heterogeneous nuclear ribonucleoprotein 27c [Aedes aegypti]
gi|94468876|gb|ABF18287.1| RNA-binding protein musashi/mRNA cleavage and polyadenylation
factor I complex subunit HRP1 [Aedes aegypti]
gi|108875770|gb|EAT39995.1| AAEL008257-PA [Aedes aegypti]
Length = 398
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G LP T DLR +FSR+G +++V + D ++ RGFGF++F E +R +
Sbjct: 109 KVFLGGLPPNITETDLRSFFSRYGNVMEVVIMYDQEKKKSRGFGFLSFENEPAVERATAE 168
Query: 147 SH-EICGQQVAIDSATPLDDAGPSQNFMMNA 176
I G+QV I A P D +G N MNA
Sbjct: 169 HFVNISGKQVEIKKAEPRDGSG--NNNSMNA 197
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 70 HPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGF 129
HP E K+FVG L E T E+L+RYF R+G ++D V K+ + RGF
Sbjct: 2 HPSKKMNAAELDDHEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGF 61
Query: 130 GFVTFAEEVVADR-VSRRSHEICGQQVAIDSATP 162
GFVTFA+ DR + H + G+ + P
Sbjct: 62 GFVTFADPDNVDRALENGPHTLDGRTIDPKPCNP 95
>gi|432854564|ref|XP_004067963.1| PREDICTED: DAZ-associated protein 1-like isoform 2 [Oryzias
latipes]
Length = 435
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG +P +LR YF+RFG + +V + D ++ RGFGF+TF AE+ V V+
Sbjct: 113 KKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVN 172
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQ 170
H+I G++V + A P D P Q
Sbjct: 173 MHFHDIMGKKVEVKKAEPRDSKAPGQ 198
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 146 RSHEICGQQVAIDSATP 162
+ H + G+ + TP
Sbjct: 72 KPHNLDGRNIDPKPCTP 88
>gi|147783406|emb|CAN75218.1| hypothetical protein VITISV_003519 [Vitis vinifera]
Length = 482
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 34/205 (16%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E +++D H + G TV +A P++D
Sbjct: 56 DPAVAERVVMDKHMIDGRTVEAKKAVPRDDQH---------------------------- 87
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
L + GS +G + KKIFVG L T D ++YF +FG I DV V D
Sbjct: 88 --LLNRNTGSIHGSPGPGRT--KKIFVGGLASTVTESDFKKYFDQFGTINDVVVMYDHNT 143
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDDA-GPSQNFMMNAAETFG 181
RGFGF+T+ E +RV ++ HE+ G+ V + A P + + GPS++ ++ G
Sbjct: 144 QRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKRAVPKEHSPGPSRSPLVGYNYGLG 203
Query: 182 GYGGPMRTYGRMYGSLDFDDWGYGM 206
+ YG+ Y +G M
Sbjct: 204 RNNNFLNNYGQGYNMSSVGSYGIRM 228
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + + L+ YF +G +++ + +D RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVMD 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD Q+ + + G GP RT G L
Sbjct: 67 KHMIDGRTVEAKKAVPRDD----QHLLNRNTGSIHGSPGPGRTKKIFVGGL 113
>gi|432854562|ref|XP_004067962.1| PREDICTED: DAZ-associated protein 1-like isoform 1 [Oryzias
latipes]
Length = 404
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG +P +LR YF+RFG + +V + D ++ RGFGF+TF AE+ V V+
Sbjct: 113 KKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVN 172
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQ 170
H+I G++V + A P D P Q
Sbjct: 173 MHFHDIMGKKVEVKKAEPRDSKAPGQ 198
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 146 RSHEICGQQVAIDSATP 162
+ H + G+ + TP
Sbjct: 72 KPHNLDGRNIDPKPCTP 88
>gi|195117176|ref|XP_002003125.1| GI24040 [Drosophila mojavensis]
gi|193913700|gb|EDW12567.1| GI24040 [Drosophila mojavensis]
Length = 423
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+F+G LP T DLR +F R+G++ +V + D ++ RGFGF++F EE + V+
Sbjct: 95 GYKVFLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEEASVEHVT 154
Query: 145 R-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYG 184
R + G+QV I A P D +G QN N + G YG
Sbjct: 155 NERYINLNGKQVEIKKAEPRDGSG-GQN--SNNSAVGGAYG 192
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L RYF RFG I+D V K+ + RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPGNVNHVLQS 67
Query: 147 S-HEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|224110618|ref|XP_002315580.1| predicted protein [Populus trichocarpa]
gi|222864620|gb|EEF01751.1| predicted protein [Populus trichocarpa]
Length = 459
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 67/141 (47%), Gaps = 20/141 (14%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP T + R+YF FG + DV + D RGFGF++F E DRV +
Sbjct: 110 KKIFVGGLPPTLTEDGFRQYFEAFGFVADVVIMYDQSTQRPRGFGFISFDTEDAVDRVLQ 169
Query: 146 RS-HEICGQQVAIDSATPLDDAGPSQNFMMNAA--ETFGGYGGPMRTY-GRM-------- 193
RS H++ G+QV + A P +A P + +G GG +Y GRM
Sbjct: 170 RSFHDLNGKQVEVKRALP-KEANPGGGGRSMGGSYQNYGASGGNTSSYDGRMERYMQPQG 228
Query: 194 -------YGSLDFDDWGYGMG 207
YGS + GYG G
Sbjct: 229 TGGGFPPYGSSGYSTAGYGYG 249
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + E + E LR YF ++G +L V KD RGFGFV FA+ V D V +
Sbjct: 7 KLFIGGISWETSEEKLRDYFGQYGDVLQAVVMKDKTTGRPRGFGFVVFADPAVLDMVLQD 66
Query: 147 SHEICGQQVAIDSA 160
H I G+ V A
Sbjct: 67 KHTIDGRMVEAKRA 80
>gi|442761931|gb|JAA73124.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Ixodes ricinus]
Length = 227
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KK+FVG L T ED++ YF +FGRI D + D + HRGFGFVTF E VAD+V
Sbjct: 15 KKVFVGGLSAPRTLEDVKNYFQQFGRIEDAMLMFDKQTNRHRGFGFVTFENEDVADKVCE 74
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 75 IHFHEINNKMVECKKAQPKEVMMPN 99
>gi|194760296|ref|XP_001962377.1| GF15435 [Drosophila ananassae]
gi|190616074|gb|EDV31598.1| GF15435 [Drosophila ananassae]
Length = 421
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+F+G LP T DLR +F R+G++ +V + D ++ RGFGF++F EE + V+
Sbjct: 95 GYKVFLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVT 154
Query: 145 R-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 199
R + G+QV I A P D +G + +G G +G + ++
Sbjct: 155 NERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 210
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L RYF RFG I+D V K+ + RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 147 S-HEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|224089693|ref|XP_002308799.1| predicted protein [Populus trichocarpa]
gi|222854775|gb|EEE92322.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T D R+YF +FG I DV V D RGFGF+T+ E DRV
Sbjct: 106 KKIFVGGLASTVTESDFRKYFDQFGVITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLH 165
Query: 146 RS-HEICGQQVAIDSATPLD-DAGPSQN 171
++ HE+ G+ V + A P + GP++N
Sbjct: 166 KTFHELNGKMVEVKRAVPKELSPGPARN 193
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + + L+ YF FG +L+ + KD RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWDTNEDRLKEYFRAFGEVLEAVIMKDRATGRARGFGFVVFADPAVAERVVME 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P +D QN + + + G GP RT G L
Sbjct: 67 KHLIDGRNVEAKKAVPRED----QNTLNKNSSSVNGSPGPARTKKIFVGGL 113
>gi|195338791|ref|XP_002036007.1| GM16252 [Drosophila sechellia]
gi|195577167|ref|XP_002078444.1| Hrb27C [Drosophila simulans]
gi|194129887|gb|EDW51930.1| GM16252 [Drosophila sechellia]
gi|194190453|gb|EDX04029.1| Hrb27C [Drosophila simulans]
Length = 421
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+F+G LP T DLR +F R+G++ +V + D ++ RGFGF++F EE + V+
Sbjct: 95 GYKVFLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVT 154
Query: 145 R-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 199
R + G+QV I A P D +G + +G G +G + ++
Sbjct: 155 NERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 210
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L RYF RFG I+D V K+ + RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 147 S-HEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|356535448|ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Glycine max]
Length = 471
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP T E R+YF +G + DV V D RGFGF++F E DRV
Sbjct: 112 KKIFVGGLPPTLTEEKFRQYFESYGNVTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVLH 171
Query: 146 RS-HEICGQQVAIDSATPLD 164
+S H++ G+QV + A P D
Sbjct: 172 KSFHDLNGKQVEVKRALPKD 191
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + T + L+ +F +G +L V ++ RGFGFV FA+ + DRV
Sbjct: 7 KLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNILDRVLED 66
Query: 147 SHEICGQQVAIDSATPLDDA-------GPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A +D G + N MN+ G GG +RT G L
Sbjct: 67 KHVIDGRTVDAKKAFSREDQQISVTSRGGNSNSGMNS-----GNGGNIRTKKIFVGGL 119
>gi|194862724|ref|XP_001970091.1| GG10443 [Drosophila erecta]
gi|195471631|ref|XP_002088106.1| GE14209 [Drosophila yakuba]
gi|190661958|gb|EDV59150.1| GG10443 [Drosophila erecta]
gi|194174207|gb|EDW87818.1| GE14209 [Drosophila yakuba]
Length = 421
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+F+G LP T DLR +F R+G++ +V + D ++ RGFGF++F EE + V+
Sbjct: 95 GYKVFLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVT 154
Query: 145 R-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 199
R + G+QV I A P D +G + +G G +G + ++
Sbjct: 155 NERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 210
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L RYF RFG I+D V K+ + RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 147 S-HEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|427795623|gb|JAA63263.1| Putative tar dna-binding protein 43, partial [Rhipicephalus
pulchellus]
Length = 420
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
Query: 78 GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEE 137
G++S+ + +K+FVGR ++ +++DLR YFS++G + DV++PK R F FVTF +
Sbjct: 121 GQASE-LSRKVFVGRCTEDLSSDDLRDYFSKYGEVTDVFIPKP-----FRAFAFVTFVDP 174
Query: 138 VVADRVSRRSHEICGQQVAIDSATPLDDAGPSQN 171
VA + H I G + + +A P +A PS +
Sbjct: 175 DVAQSLCGEDHIIRGTSIHVSNAVPKSEAAPSSH 208
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E+ Q+ I +G LP + + +DLR+YF FG +L V KDPK +GFGF+ F+
Sbjct: 34 RLENRQKCSDLIVLG-LPWKTSEQDLRQYFETFGEVLMAQVKKDPKTGQSKGFGFIRFSS 92
Query: 137 EVVADRVSRRSHEICGQQVAI 157
R + H I G+ +
Sbjct: 93 YESQVRALSKRHLIDGRWCDV 113
>gi|383873338|ref|NP_001244741.1| heterogeneous nuclear ribonucleoprotein A/B [Macaca mulatta]
gi|380787211|gb|AFE65481.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
gi|383409139|gb|AFH27783.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
gi|384940566|gb|AFI33888.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
Length = 332
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H I G + I A P +
Sbjct: 214 KKFHTISGSKCEIKVAQPKE 233
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 146 RSHEICGQQVAIDSATPL 163
+ H + G+ + A +
Sbjct: 131 KEHRLDGRVIDPKKAMAM 148
>gi|66804019|gb|AAY56658.1| heterogeneous nuclear ribonucleoprotein [Drosophila simulans]
Length = 421
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+F+G LP T DLR +F R+G++ +V + D ++ RGFGF++F EE + V+
Sbjct: 95 GYKVFLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVT 154
Query: 145 R-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 199
R + G+QV I A P D +G + +G G +G + ++
Sbjct: 155 NERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 210
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L RYF RFG I+D V K+ + RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 147 S-HEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|79325275|ref|NP_001031725.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332659833|gb|AEE85233.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 452
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 28/181 (15%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E +++D H + G TV +A P++D R+A
Sbjct: 62 DPSVAERVIMDKHIIDGRTVEAKKAVPRDDQ-------------------QVLKRHA--- 99
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+P P S G G ++ KKIFVG LP T + + YF +FG I DV V D
Sbjct: 100 SPMHLISP-SHGGNGGGART--KKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNT 156
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP--LDDAGPSQNFMMNAAETF 180
RGFGF+TF E D V ++ HE+ G+ V + A P L P+++ ++ +
Sbjct: 157 QRPRGFGFITFDSEESVDMVLHKTFHELNGKMVEVKRAVPKELSSTTPNRSPLIGYGNNY 216
Query: 181 G 181
G
Sbjct: 217 G 217
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 12/126 (9%)
Query: 79 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEV 138
ES+ +GK +F+G + + E L+ YF ++G +++ + +D RGFGF+ FA+
Sbjct: 6 ESASDLGK-LFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPS 64
Query: 139 VADRVSRRSHEICGQQVAIDSATPLDD-------AGPSQNFMMNAAETFGGYGGPMRTYG 191
VA+RV H I G+ V A P DD A P M + + GG GG RT
Sbjct: 65 VAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASP----MHLISPSHGGNGGGARTKK 120
Query: 192 RMYGSL 197
G L
Sbjct: 121 IFVGGL 126
>gi|162951821|ref|NP_001106165.1| heterogeneous nuclear ribonucleoprotein A/B [Sus scrofa]
gi|160858224|dbj|BAF93845.1| CArG-binding factor A [Sus scrofa]
Length = 302
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 170 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLE 229
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H I G + I A P +
Sbjct: 230 KKFHTISGSKCEIKVAQPKE 249
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 87 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 146
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 147 KEHRLDGRVI 156
>gi|226494259|ref|NP_001146396.1| uncharacterized protein LOC100279976 [Zea mays]
gi|219887017|gb|ACL53883.1| unknown [Zea mays]
gi|223975747|gb|ACN32061.1| unknown [Zea mays]
Length = 470
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 98/238 (41%), Gaps = 63/238 (26%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E + +D H + G V +A P++D A+ +++G
Sbjct: 56 DSGIAERVTLDKHMIDGRMVEAKKAVPRDDQ------------------SIASKNNSSIG 97
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+P G G + +KIFVG L T + RRYF +FG I DV V D
Sbjct: 98 SP----------GPGRT-----RKIFVGGLASNVTEVEFRRYFEQFGVITDVVVMYDHNT 142
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDDA-GP-------SQNFMM 174
RGFGF+T+ E D+ ++ HE+ G+ V + A P + + GP QN+ M
Sbjct: 143 QRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPKEQSPGPIARSPAGGQNYAM 202
Query: 175 NAAETF-------------GGYGGPMRTYGRMYGSLD-----FDDWGYGMGSGRPSRG 214
+ F GGYG MR GR YG L F +G G G G + G
Sbjct: 203 SRVHNFLNGFNQGYNPNPLGGYG--MRVDGR-YGLLTGARNGFSSFGPGYGMGMNAEG 257
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + E + LR YF RFG + + + +D RGFGFV FA+ +A+RV+
Sbjct: 7 KLFVGGISWETDEDRLRAYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTLD 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 KHMIDGRMVEAKKAVPRDD 85
>gi|414887334|tpg|DAA63348.1| TPA: hypothetical protein ZEAMMB73_769138, partial [Zea mays]
Length = 467
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 98/238 (41%), Gaps = 63/238 (26%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E + +D H + G V +A P++D A+ +++G
Sbjct: 56 DSGIAERVTLDKHMIDGRMVEAKKAVPRDDQ------------------SIASKNNSSIG 97
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+P G G + +KIFVG L T + RRYF +FG I DV V D
Sbjct: 98 SP----------GPGRT-----RKIFVGGLASNVTEVEFRRYFEQFGVITDVVVMYDHNT 142
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDDA-GP-------SQNFMM 174
RGFGF+T+ E D+ ++ HE+ G+ V + A P + + GP QN+ M
Sbjct: 143 QRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPKEQSPGPIARSPAGGQNYAM 202
Query: 175 NAAETF-------------GGYGGPMRTYGRMYGSLD-----FDDWGYGMGSGRPSRG 214
+ F GGYG MR GR YG L F +G G G G + G
Sbjct: 203 SRVHNFLNGFNQGYNPNPLGGYG--MRVDGR-YGLLTGARNGFSSFGPGYGMGMNAEG 257
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + E + LR YF RFG + + + +D RGFGFV FA+ +A+RV+
Sbjct: 7 KLFVGGISWETDEDRLRAYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTLD 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 KHMIDGRMVEAKKAVPRDD 85
>gi|255537972|ref|XP_002510051.1| DAZ-associated protein, putative [Ricinus communis]
gi|223550752|gb|EEF52238.1| DAZ-associated protein, putative [Ricinus communis]
Length = 370
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 74/169 (43%), Gaps = 14/169 (8%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D V+ + D+H + G TV V +A PK + + ++ Y
Sbjct: 56 DSAFVDKALQDSHVILGRTVEVKKAIPKTEQLQ------------FHRYQQQQQWQFPNQ 103
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+ G G R KKIFVG L T E + YF FG+I+DV V +D
Sbjct: 104 QKNSRLSESNGNGNGGDYFRT-KKIFVGGLSSSLTEEQFKDYFESFGKIVDVVVMQDSST 162
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDDAGPSQN 171
RGFGFVTF E D+ ++ HE+ G++V + A P ++ + N
Sbjct: 163 NRPRGFGFVTFDSEDSVDKAMEKTFHELMGKRVEVKRAVPKEEISGTIN 211
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG + ++ + + LR +FS++G + V KD RGFGFV F++ D+ +
Sbjct: 7 KIFVGGISRDTSEDALRVHFSKYGTVSGSLVAKDKITKNSRGFGFVWFSDSAFVDKALQD 66
Query: 147 SHEICGQQVAIDSATP 162
SH I G+ V + A P
Sbjct: 67 SHVILGRTVEVKKAIP 82
>gi|427797245|gb|JAA64074.1| Putative tar dna-binding protein 43, partial [Rhipicephalus
pulchellus]
Length = 517
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
Query: 78 GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEE 137
G++S+ + +K+FVGR ++ +++DLR YFS++G + DV++PK R F FVTF +
Sbjct: 218 GQASE-LSRKVFVGRCTEDLSSDDLRDYFSKYGEVTDVFIPKP-----FRAFAFVTFVDP 271
Query: 138 VVADRVSRRSHEICGQQVAIDSATPLDDAGPSQN 171
VA + H I G + + +A P +A PS +
Sbjct: 272 DVAQSLCGEDHIIRGTSIHVSNAVPKSEAAPSSH 305
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E+ Q+ I +G LP + + +DLR+YF FG +L V KDPK +GFGF+ F+
Sbjct: 131 RLENRQKCSDLIVLG-LPWKTSEQDLRQYFETFGEVLMAQVKKDPKTGQSKGFGFIRFSS 189
Query: 137 EVVADRVSRRSHEICGQQVAI 157
R + H I G+ +
Sbjct: 190 YESQVRALSKRHLIDGRWCDV 210
>gi|328709829|ref|XP_001950969.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 87F-like
[Acyrthosiphon pisum]
Length = 349
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
+K+F+G L T + L+ +F ++G I+DV V KDP+ RGFGF+T+++ + D+ +S
Sbjct: 10 RKLFIGGLNYTTTNDSLKEFFEQWGEIVDVVVMKDPQTKRSRGFGFITYSQSSMVDQAMS 69
Query: 145 RRSHEICGQQVAIDSATPLDD 165
R H+I G++V A P DD
Sbjct: 70 NRPHKIDGREVETKRAVPRDD 90
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KK+FV + +E + DL YF +FG I +V + D +GFGF+ + + D+ V
Sbjct: 101 KKMFVSGI-KEQSENDLLEYFGKFGNITNVTIVTDKDSGQRKGFGFIEYDDTDSVDKAVL 159
Query: 145 RRSHEICGQQVAIDSA 160
+SH++ G ++ + A
Sbjct: 160 IKSHQVAGGKLDVKKA 175
>gi|167516158|ref|XP_001742420.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779044|gb|EDQ92658.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
+K+FVG LP AT E L RYFS FG + + + D + RGFGFVTF + ++AD+ VS
Sbjct: 105 RKVFVGGLPPTATNEMLHRYFSHFGGVEEAVIIHDKQTRTPRGFGFVTFEDPIIADKVVS 164
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQN 171
HE G+ V + A P DA S N
Sbjct: 165 VHYHEFYGKMVEVKRAEPKADASKSPN 191
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L E T + L YF FG ++D V DP RGFGFVT+ + D V +
Sbjct: 1 KLFIGGLSPETTHDRLLDYFQVFGDVVDCVVMTDPATGRTRGFGFVTYRDGRCCDSVLAH 60
Query: 146 RSHEICGQQVAIDSATP 162
R H + G++V A P
Sbjct: 61 RPHVVDGREVDPKRAVP 77
>gi|90077042|dbj|BAE88201.1| unnamed protein product [Macaca fascicularis]
Length = 187
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 9 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 68
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H I G + I A P +
Sbjct: 69 KKFHTISGSKCEIKVAQPKE 88
>gi|18416794|ref|NP_567753.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16930503|gb|AAL31937.1|AF419605_1 AT4g26650/T15N24_100 [Arabidopsis thaliana]
gi|20453245|gb|AAM19861.1| AT4g26650/T15N24_100 [Arabidopsis thaliana]
gi|332659832|gb|AEE85232.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 455
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 28/181 (15%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E +++D H + G TV +A P++D R+A
Sbjct: 65 DPSVAERVIMDKHIIDGRTVEAKKAVPRDDQ-------------------QVLKRHA--- 102
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+P P S G G ++ KKIFVG LP T + + YF +FG I DV V D
Sbjct: 103 SPMHLISP-SHGGNGGGART--KKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNT 159
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP--LDDAGPSQNFMMNAAETF 180
RGFGF+TF E D V ++ HE+ G+ V + A P L P+++ ++ +
Sbjct: 160 QRPRGFGFITFDSEESVDMVLHKTFHELNGKMVEVKRAVPKELSSTTPNRSPLIGYGNNY 219
Query: 181 G 181
G
Sbjct: 220 G 220
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 12/126 (9%)
Query: 79 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEV 138
ES+ +GK +F+G + + E L+ YF ++G +++ + +D RGFGF+ FA+
Sbjct: 9 ESASDLGK-LFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPS 67
Query: 139 VADRVSRRSHEICGQQVAIDSATPLDD-------AGPSQNFMMNAAETFGGYGGPMRTYG 191
VA+RV H I G+ V A P DD A P M + + GG GG RT
Sbjct: 68 VAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASP----MHLISPSHGGNGGGARTKK 123
Query: 192 RMYGSL 197
G L
Sbjct: 124 IFVGGL 129
>gi|426229393|ref|XP_004008775.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 1
[Ovis aries]
Length = 285
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLE 213
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H I G + I A P +
Sbjct: 214 KKFHTISGSKCEIKVAQPKE 233
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 131 KEHRLDGRVI 140
>gi|115475858|ref|NP_001061525.1| Os08g0320100 [Oryza sativa Japonica Group]
gi|35215091|dbj|BAC92448.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|42409159|dbj|BAD10426.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113623494|dbj|BAF23439.1| Os08g0320100 [Oryza sativa Japonica Group]
gi|215768436|dbj|BAH00665.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200931|gb|EEC83358.1| hypothetical protein OsI_28764 [Oryza sativa Indica Group]
gi|258644640|dbj|BAI39889.1| ribonucleoprotein-like [Oryza sativa Indica Group]
Length = 350
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G LP++ T + YF ++G I+D + KD RGFGF+TFA+ V DRV
Sbjct: 16 KIFIGGLPKDTTMGTFKEYFGKYGEIVDAVIMKDRFTQKPRGFGFITFADPAVVDRVIED 75
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNF 172
+H I G++V I P A P ++F
Sbjct: 76 NHVINGKEVEIKRTIP-KGAAPLKDF 100
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG LP ++ + +FS+FG++++ + +D RGFGFV F AE+ V + ++
Sbjct: 103 KKIFVGGLPSALKEDEFKEFFSKFGKVVEHEIIRDHSTNRSRGFGFVVFDAEKTVDELLA 162
Query: 145 RRSH--EICGQQVAIDSATPLDDAGP 168
++ + ++ G QV I A P + P
Sbjct: 163 KKGNMIDLNGSQVEIKKAEPKKPSNP 188
>gi|94966849|ref|NP_001035612.1| heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
gi|73587357|gb|AAI02924.1| Heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
gi|296485515|tpg|DAA27630.1| TPA: heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
Length = 285
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLE 213
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H I G + I A P +
Sbjct: 214 KKFHTISGSKCEIKVAQPKE 233
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKVLDQ 130
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 131 KEHRLDGRVI 140
>gi|402873600|ref|XP_003900659.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Papio
anubis]
Length = 311
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 145 RRSHEICGQQVAIDSATP 162
++ H I G + I A P
Sbjct: 214 KKFHTISGSKCEIKVAQP 231
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 131 KEHRLDGRVI 140
>gi|194741284|ref|XP_001953119.1| GF17370 [Drosophila ananassae]
gi|190626178|gb|EDV41702.1| GF17370 [Drosophila ananassae]
Length = 343
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E T E+++ YF +FG I++V +P D +++ +GF F+TF AE+VV D +
Sbjct: 138 KIFVGGLTTEITDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDAEQVVTDLLKT 197
Query: 146 RSHEICGQQVAIDSATP 162
+I G++V + ATP
Sbjct: 198 PKQKIAGKEVDVKRATP 214
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVG L E T ++LR +F +FG I + V DP+ RGF F+ F D+VS
Sbjct: 57 RKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTTTEAIDKVSA 116
Query: 146 RSHEICGQQ 154
I +
Sbjct: 117 AEEHIINSK 125
>gi|156395208|ref|XP_001637003.1| predicted protein [Nematostella vectensis]
gi|156224112|gb|EDO44940.1| predicted protein [Nematostella vectensis]
Length = 291
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R + + KK+FVGRLP+ T + L YF++FG + DVY+PK R FGFVTFA
Sbjct: 190 RPKEELNVPKKLFVGRLPESTTEKTLMEYFAQFGEVTDVYIPKP-----FRHFGFVTFAS 244
Query: 137 EVVADRVSRRSHEICGQQVAIDSATPLDDA 166
+A +V ++H I G + I A P A
Sbjct: 245 GELAKKVLSQNHRISGSLLNITFAEPKSTA 274
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 84 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+G I +G LP T +++ YF+RFG I V DP RGFGFV F ++ A V
Sbjct: 114 VGDLIVLG-LPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNV 172
Query: 144 SRRSHEICGQQVAIDSATPLDDAG-PSQNFM 173
SH I G+ + P ++ P + F+
Sbjct: 173 LSTSHRIQGRLCEVRLPRPKEELNVPKKLFV 203
>gi|449443534|ref|XP_004139532.1| PREDICTED: uncharacterized protein LOC101217028 [Cucumis sativus]
gi|449505564|ref|XP_004162509.1| PREDICTED: uncharacterized LOC101217028 [Cucumis sativus]
Length = 477
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG L T D ++YF +FG I+DV V D RGFGF+T+ +EE V +
Sbjct: 104 KKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLY 163
Query: 145 RRSHEICGQQVAIDSATPLDDAG-PSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWG 203
+ HE+ G+ V + A P + + P++N + FG G + Y + Y G
Sbjct: 164 KTFHELNGKMVEVKRAVPKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVG--G 221
Query: 204 YGMGSGRPSRGDWRYRP 220
YG+ R D R+ P
Sbjct: 222 YGL------RSDGRFSP 232
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + + LR YF FG +++V + +D RGFGFV FA+ V A RV
Sbjct: 5 KLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARVVLE 64
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD QN + G GP RT G L
Sbjct: 65 KHVIDGRTVEAKKAVPRDD----QNILSRNNTGILGSPGPTRTKKIFVGGL 111
>gi|427797249|gb|JAA64076.1| Putative tar dna-binding protein 43, partial [Rhipicephalus
pulchellus]
Length = 521
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
Query: 78 GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEE 137
G++S+ + +K+FVGR ++ +++DLR YFS++G + DV++PK R F FVTF +
Sbjct: 222 GQASE-LSRKVFVGRCTEDLSSDDLRDYFSKYGEVTDVFIPKP-----FRAFAFVTFVDP 275
Query: 138 VVADRVSRRSHEICGQQVAIDSATPLDDAGPSQN 171
VA + H I G + + +A P +A PS +
Sbjct: 276 DVAQSLCGEDHIIRGTSIHVSNAVPKSEAAPSSH 309
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E+ Q+ I +G LP + + +DLR+YF FG +L V KDPK +GFGF+ F+
Sbjct: 131 RLENRQKCSDLIVLG-LPWKTSEQDLRQYFETFGEVLMAQVKKDPKTGQSKGFGFIRFSS 189
Query: 137 EVVADRVSRRSHEICGQQVAI 157
R + H I G+ +
Sbjct: 190 YESQVRALSKRHLIDGRWCDV 210
>gi|115477046|ref|NP_001062119.1| Os08g0492100 [Oryza sativa Japonica Group]
gi|42408771|dbj|BAD10006.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|113624088|dbj|BAF24033.1| Os08g0492100 [Oryza sativa Japonica Group]
gi|215765667|dbj|BAG87364.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201366|gb|EEC83793.1| hypothetical protein OsI_29708 [Oryza sativa Indica Group]
gi|222640778|gb|EEE68910.1| hypothetical protein OsJ_27766 [Oryza sativa Japonica Group]
Length = 362
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG LP++ T D ++F ++G I+D + +D + RGFGF+T++ V DRV
Sbjct: 24 KIFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGFITYSNPAVVDRVMDD 83
Query: 147 SHEICGQQVAIDSATPLD 164
HE G+QV I P D
Sbjct: 84 IHEFNGKQVEIKRTIPKD 101
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LPQ T +D + +F ++G ++D + +D + RGFGF+ F+ + V D +
Sbjct: 111 KKIFVGGLPQALTEDDFKHFFQKYGPVVDHQIMRDHQTKRSRGFGFIVFSSDQVVDDLLA 170
Query: 146 RSH--EICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL-----D 198
+ ++ G +V I A P + P + +A+ + G + G YG L +
Sbjct: 171 NGNMIDLAGAKVEIKKAEPKKSSNPPPSSHGSASRSAYGRDSRGHSSGNDYGGLANAYSN 230
Query: 199 FDDWGYG 205
++ G+G
Sbjct: 231 YNSGGFG 237
>gi|125984017|ref|XP_001355773.1| GA10287 [Drosophila pseudoobscura pseudoobscura]
gi|54644090|gb|EAL32832.1| GA10287 [Drosophila pseudoobscura pseudoobscura]
Length = 421
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+F+G LP T DLR +F R+G++ +V + D ++ RGFGF++F EE + V+
Sbjct: 95 GYKVFLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVT 154
Query: 145 R-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYG 184
R + G+QV I A P D +G QN N + G YG
Sbjct: 155 NERYINLNGKQVEIKKAEPRDGSG-GQN--SNNSTVGGAYG 192
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L RYF RFG I+D V K+ + RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 147 S-HEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|388329663|gb|AFK29218.1| musashi-PB, partial [Drosophila buzzatii]
Length = 636
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG + Q+ +AE+++ YFS+FG + + + D + HRGFGFVTF E V DRV
Sbjct: 274 KKIFVGGVSQDTSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 333
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFM 173
H I ++V A P + P+ +
Sbjct: 334 IHFHTIKNKKVECKKAQPKEAVTPAAQLL 362
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + ++E L+ YF+ FG + DV + KDP RGFGF+TF E D+V +
Sbjct: 187 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 246
Query: 147 S-HEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 247 PIHTLDGKKIDPKHATP 263
>gi|195438186|ref|XP_002067018.1| GK24781 [Drosophila willistoni]
gi|194163103|gb|EDW78004.1| GK24781 [Drosophila willistoni]
Length = 422
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+F+G LP T DLR +F R+G++ +V + D ++ RGFGF++F EE + V+
Sbjct: 95 GYKVFLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVT 154
Query: 145 R-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYG 184
R + G+QV I A P D +G QN N + G YG
Sbjct: 155 NERYINLNGKQVEIKKAEPRDGSG-GQN--SNNSAVGGAYG 192
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L RYF RFG I+D V K+ + RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 147 S-HEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|414887335|tpg|DAA63349.1| TPA: hypothetical protein ZEAMMB73_769138 [Zea mays]
Length = 342
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 98/238 (41%), Gaps = 63/238 (26%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E + +D H + G V +A P++D A+ +++G
Sbjct: 56 DSGIAERVTLDKHMIDGRMVEAKKAVPRDDQ------------------SIASKNNSSIG 97
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+P G G + +KIFVG L T + RRYF +FG I DV V D
Sbjct: 98 SP----------GPGRT-----RKIFVGGLASNVTEVEFRRYFEQFGVITDVVVMYDHNT 142
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDDA-GP-------SQNFMM 174
RGFGF+T+ E D+ ++ HE+ G+ V + A P + + GP QN+ M
Sbjct: 143 QRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPKEQSPGPIARSPAGGQNYAM 202
Query: 175 NAAETF-------------GGYGGPMRTYGRMYGSLD-----FDDWGYGMGSGRPSRG 214
+ F GGYG MR GR YG L F +G G G G + G
Sbjct: 203 SRVHNFLNGFNQGYNPNPLGGYG--MRVDGR-YGLLTGARNGFSSFGPGYGMGMNAEG 257
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + E + LR YF RFG + + + +D RGFGFV FA+ +A+RV+
Sbjct: 7 KLFVGGISWETDEDRLRAYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTLD 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 KHMIDGRMVEAKKAVPRDD 85
>gi|390178412|ref|XP_003736644.1| GA14206, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859438|gb|EIM52717.1| GA14206, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 319
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E+++ YFS+FG I++V +P D +++ +GF F+TF +E+VV D +
Sbjct: 136 KIFVGGLTTEISDEEIKTYFSQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 195
Query: 146 RSHEICGQQVAIDSATP 162
+I G++V + ATP
Sbjct: 196 PKQKISGKEVDVKRATP 212
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 72 GSFYGRGESSQRIG-KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFG 130
GS + S+QR +K+FVG L E T ++LR +F +FG I + V DP+ RGF
Sbjct: 40 GSEHTSAVSNQRDDDRKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFA 99
Query: 131 FVTFAEEVVADRVSRRSHEICGQQ 154
F+ F D+VS I +
Sbjct: 100 FIVFTNTEAIDKVSSAGEHIINSK 123
>gi|356576454|ref|XP_003556346.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Glycine max]
Length = 476
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP T E R YF +G + DV V D RGFGF++F E DRV
Sbjct: 112 KKIFVGGLPPTLTEEKFRLYFESYGHVTDVVVMYDQNTGRPRGFGFISFDTEEAVDRVLH 171
Query: 146 RS-HEICGQQVAIDSATPLD 164
+S H++ G+QV + A P D
Sbjct: 172 KSFHDLNGKQVEVKRALPKD 191
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 12/118 (10%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + T + L+ +F +G +L V ++ RGFGFV FA+ + DRV
Sbjct: 7 KLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNILDRVLED 66
Query: 147 SHEICGQQVAIDSATPLDDA-------GPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A +D G + N MN+ GG +RT G L
Sbjct: 67 KHVIDGRTVDAKKAFSREDQQISVTSRGGNSNSGMNSEN-----GGNIRTKKIFVGGL 119
>gi|195387610|ref|XP_002052487.1| GJ21323 [Drosophila virilis]
gi|194148944|gb|EDW64642.1| GJ21323 [Drosophila virilis]
Length = 421
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+F+G LP T DLR +F R+G++ +V + D ++ RGFGF++F EE + V+
Sbjct: 95 GYKVFLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVT 154
Query: 145 R-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYG 184
R + G+QV I A P D +G QN N + G YG
Sbjct: 155 NERYINLNGKQVEIKKAEPRDGSG-GQN--SNNSAVGGAYG 192
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L RYF RFG I+D V K+ + RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVNHVLQS 67
Query: 147 S-HEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|195052284|ref|XP_001993272.1| GH13720 [Drosophila grimshawi]
gi|193900331|gb|EDV99197.1| GH13720 [Drosophila grimshawi]
Length = 421
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+F+G LP T DLR +F R+G++ +V + D ++ RGFGF++F EE + V+
Sbjct: 95 GYKVFLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVT 154
Query: 145 R-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYG 184
R + G+QV I A P D +G QN N + G YG
Sbjct: 155 NERYINLNGKQVEIKKAEPRDGSG-GQN--SNNSAVGGAYG 192
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L RYF RFG I+D V K+ + RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVNHVLQN 67
Query: 147 S-HEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|18423760|ref|NP_568826.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|42573682|ref|NP_974937.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|15292725|gb|AAK92731.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|20465895|gb|AAM20100.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332009263|gb|AED96646.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009264|gb|AED96647.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 460
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 69/163 (42%), Gaps = 45/163 (27%)
Query: 9 ENLMVDTHELGGSTVVVDRATPKEDD------FRPVGRMS--HGGYGAYNAYISAATRYA 60
E +++D H + G TV +A P++D P+ MS HGG G
Sbjct: 61 ERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRT----------- 109
Query: 61 ALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKD 120
KKIFVG LP T E+ + YF +FG I DV V D
Sbjct: 110 -------------------------KKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYD 144
Query: 121 PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP 162
RGFGF+TF + DRV ++ HE+ G+ V + A P
Sbjct: 145 HNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAVP 187
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E LR YFS +G +++ + +D RGFGF+ FA+ V++RV
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 KHIIDGRTVEAKKAVPRDD 85
>gi|5052976|gb|AAD38787.1|AF153444_1 hnRNP A/B related protein, partial [Felis catus]
Length = 279
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 148 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKVLE 207
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H I G + I A P +
Sbjct: 208 KKFHTISGSKCEIKVAQPKE 227
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + P +GFGF+ F + ++V +
Sbjct: 65 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMVPNTGRSKGFGFILFKDAASVEKVLDQ 124
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 125 KEHRLDGRVI 134
>gi|380786855|gb|AFE65303.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
gi|383409141|gb|AFH27784.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
gi|384940568|gb|AFI33889.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
Length = 285
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H I G + I A P +
Sbjct: 214 KKFHTISGSKCEIKVAQPKE 233
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 131 KEHRLDGRVI 140
>gi|30696616|ref|NP_851195.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|334188426|ref|NP_001190546.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009262|gb|AED96645.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009265|gb|AED96648.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 448
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 69/163 (42%), Gaps = 45/163 (27%)
Query: 9 ENLMVDTHELGGSTVVVDRATPKEDD------FRPVGRMS--HGGYGAYNAYISAATRYA 60
E +++D H + G TV +A P++D P+ MS HGG G
Sbjct: 61 ERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRT----------- 109
Query: 61 ALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKD 120
KKIFVG LP T E+ + YF +FG I DV V D
Sbjct: 110 -------------------------KKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYD 144
Query: 121 PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP 162
RGFGF+TF + DRV ++ HE+ G+ V + A P
Sbjct: 145 HNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAVP 187
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E LR YFS +G +++ + +D RGFGF+ FA+ V++RV
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 KHIIDGRTVEAKKAVPRDD 85
>gi|269914213|gb|ACZ52626.1| MIP15164p [Drosophila melanogaster]
Length = 578
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG + Q+ +AE+++ YFS+FG + + + D + HRGFGFVTF E V DRV
Sbjct: 235 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 294
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFM 173
H I ++V A P + P+ +
Sbjct: 295 IHFHTIKNKKVECKKAQPKEAVTPAAQLL 323
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + +++ L+ YF+ FG + DV + KDP RGFGF+TF E ++V +
Sbjct: 148 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 207
Query: 147 S-HEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 208 PIHTLDGKKIDPKHATP 224
>gi|22531168|gb|AAM97088.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 448
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 69/163 (42%), Gaps = 45/163 (27%)
Query: 9 ENLMVDTHELGGSTVVVDRATPKEDD------FRPVGRMS--HGGYGAYNAYISAATRYA 60
E +++D H + G TV +A P++D P+ MS HGG G
Sbjct: 61 ERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRT----------- 109
Query: 61 ALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKD 120
KKIFVG LP T E+ + YF +FG I DV V D
Sbjct: 110 -------------------------KKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYD 144
Query: 121 PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP 162
RGFGF+TF + DRV ++ HE+ G+ V + A P
Sbjct: 145 HNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAVP 187
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E LR YFS +G +++ + +D RGFGF+ FA+ V++RV
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 KHIIDGRTVEAKKAVPRDD 85
>gi|224284234|gb|ACN39853.1| unknown [Picea sitchensis]
Length = 473
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + E T + L+ YF RFG +++ + KD RGFGFV FA+ +ADRV
Sbjct: 7 KLFIGGISWETTEDRLKDYFKRFGEVVEAVIMKDRTTRRARGFGFVVFADPAIADRVVLD 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 KHTIDGRTVEAKKAIPRDD 85
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 81 SQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVA 140
SQ KKIFVG L T D R+YF +FG I DV V D RGFGF+T+ E
Sbjct: 101 SQVRTKKIFVGGLAPTVTENDFRKYFEQFGTITDVVVMYDHSTQRPRGFGFITYDSEDAV 160
Query: 141 DRVSRRS-HEICGQQVAIDSATPLD 164
D+V +++ H++ G+ V + A P +
Sbjct: 161 DQVLQKTFHDLNGKMVEVKRAVPKE 185
>gi|222423819|dbj|BAH19875.1| AT4G26650 [Arabidopsis thaliana]
Length = 452
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 28/181 (15%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E +++D H + G TV +A P++D R+A
Sbjct: 62 DPSVAERVIMDKHIIDGRTVEAKKAVPRDDQ-------------------QVLKRHA--- 99
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+P P S G G ++ KKIFVG LP T + + YF +FG I DV V D
Sbjct: 100 SPMHLISP-SHGGNGGGART--KKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNT 156
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP--LDDAGPSQNFMMNAAETF 180
RGFGF+TF E D V ++ HE+ G+ + + A P L P+++ ++ +
Sbjct: 157 QRPRGFGFITFDSEESVDMVLHKTFHELNGKMIEVKRAVPKELSSTTPNRSPLIGYGNNY 216
Query: 181 G 181
G
Sbjct: 217 G 217
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 12/126 (9%)
Query: 79 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEV 138
ES+ +GK +F+G + + E L+ YF ++G +++ + +D RGFGF+ FA+
Sbjct: 6 ESASDLGK-LFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPS 64
Query: 139 VADRVSRRSHEICGQQVAIDSATPLDD-------AGPSQNFMMNAAETFGGYGGPMRTYG 191
VA+RV H I G+ V A P DD A P M + + GG GG RT
Sbjct: 65 VAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASP----MHLISPSHGGNGGGARTKK 120
Query: 192 RMYGSL 197
G L
Sbjct: 121 IFVGGL 126
>gi|307199474|gb|EFN80087.1| TAR DNA-binding protein 43 [Harpegnathos saltator]
Length = 467
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q++ K+FVGR ++ TA+DLR YFS+FG + DV++PK R F FVTF + VA
Sbjct: 188 QQVPCKVFVGRCTEDLTADDLRDYFSKFGEVTDVFIPKP-----FRAFSFVTFLDPEVAQ 242
Query: 142 RVSRRSHEICGQQVAIDSATP 162
+ H I G V + +A P
Sbjct: 243 SLCGEDHIIKGVSVHVSNAAP 263
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E+ R I +G LP + T ++LR YF +FG +L V KD K +GFGF+ F
Sbjct: 98 RMETKLRCTDLIVLG-LPWKTTEQNLREYFEQFGEVLMAQVKKDAKSGQSKGFGFIRFGS 156
Query: 137 EVVADRVSRRSHEICGQQVAI 157
R + H I G+ +
Sbjct: 157 YESQLRCLAQRHMIDGRWCDV 177
>gi|209154614|gb|ACI33539.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 359
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEE-VVADRVS 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE V +
Sbjct: 157 KKIFVGGLNPEATEETIREYFGTFGEIESIELPVDPKFKKRRGFIFITFKEESTVKKCLE 216
Query: 145 RRSHEICGQQVA 156
++ H +CG +V
Sbjct: 217 KKFHNVCGTKVT 228
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YFS+FG + D + D RGFGF+ F D+V +
Sbjct: 74 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDSNTGRSRGFGFILFQTAASVDKVLEQ 133
Query: 146 RSHEICGQQV 155
+ H + G+Q+
Sbjct: 134 KEHRLDGRQI 143
>gi|289739881|gb|ADD18688.1| RNA-binding protein musashi [Glossina morsitans morsitans]
Length = 422
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+F+G LP T DLR +F R+G++ +V + D ++ RGFGF++F EE + V+
Sbjct: 95 GYKVFLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVT 154
Query: 145 R-RSHEICGQQVAIDSATPLDDAG 167
R + G+QV I A P D +G
Sbjct: 155 NERYINLNGKQVEIKKAEPRDGSG 178
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L RYF RFG I+D V K+ + RGFGFVTFA+ V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVQHVLQS 67
Query: 147 S-HEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|223646910|gb|ACN10213.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
gi|223672773|gb|ACN12568.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 336
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE + +
Sbjct: 166 KKIFVGGLNPEATEETIREYFGTFGEIESIELPVDPKFKKRRGFIFITFKEEATVKKCLE 225
Query: 145 RRSHEICGQQVA 156
++ H +CG +V
Sbjct: 226 KKFHNVCGTKVT 237
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YFS+FG + D + D RGFGF+ F E D+V +
Sbjct: 83 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDSNTGRSRGFGFILFKEAGSVDKVLEQ 142
Query: 146 RSHEICGQQV 155
+ H + G+Q+
Sbjct: 143 KEHRLDGRQI 152
>gi|297737532|emb|CBI26733.3| unnamed protein product [Vitis vinifera]
Length = 309
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 34/205 (16%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E +++D H + G TV +A P++D
Sbjct: 56 DPAVAERVVMDKHMIDGRTVEAKKAVPRDDQH---------------------------- 87
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
L + GS +G + KKIFVG L T D ++YF +FG I DV V D
Sbjct: 88 --LLNRNTGSIHGSPGPGRT--KKIFVGGLASTVTESDFKKYFDQFGTINDVVVMYDHNT 143
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDDA-GPSQNFMMNAAETFG 181
RGFGF+T+ E +RV ++ HE+ G+ V + A P + + GPS++ ++ G
Sbjct: 144 QRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKRAVPKEHSPGPSRSPLVGYNYGLG 203
Query: 182 GYGGPMRTYGRMYGSLDFDDWGYGM 206
+ YG+ Y +G M
Sbjct: 204 RNNNFLNNYGQGYNMSSVGSYGIRM 228
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + + L+ YF +G +++ + +D RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVMD 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD Q+ + + G GP RT G L
Sbjct: 67 KHMIDGRTVEAKKAVPRDD----QHLLNRNTGSIHGSPGPGRTKKIFVGGL 113
>gi|89257430|gb|ABD64922.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing
protein [Brassica oleracea]
Length = 426
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T + ++YF++FG I DV V D + RGFGF++F E DRV +
Sbjct: 105 KKIFVGGLASSVTEAEFKKYFAQFGTITDVVVMYDHRTQRPRGFGFISFESEEAVDRVLQ 164
Query: 146 RS-HEICGQQVAIDSATPLDDA-GPSQNFM 173
R+ HE+ G+ V + A P + A P +N M
Sbjct: 165 RTFHELNGKMVEVKLAVPKEMALNPIRNQM 194
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + E T + LR YF FG +L+ + KD RGFGF+ FA+ VA+RV
Sbjct: 6 KLFIGGISWETTEDRLREYFQSFGEVLEAVIMKDRATGRARGFGFLVFADPTVAERVVLI 65
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 66 RHVIDGKIVEAKKAVPRDD 84
>gi|410225700|gb|JAA10069.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410260870|gb|JAA18401.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410299218|gb|JAA28209.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 332
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 214 KKFHTVSGSKCEIKVAQPKE 233
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 146 RSHEICGQQVAIDSATPL 163
+ H + G+ + A +
Sbjct: 131 KEHRLDGRVIDPKKAMAM 148
>gi|18398061|ref|NP_566321.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16930693|gb|AAL32012.1|AF436830_1 AT3g07810/F17A17_15 [Arabidopsis thaliana]
gi|23297627|gb|AAN12995.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332641085|gb|AEE74606.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 494
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E L+ YFS FG +++ + KD RGFGFV FA+ VA+ V
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFM--MNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD QN + N++ G GGP RT G L
Sbjct: 67 KHNIDGRLVEAKKAVPRDD----QNMVNRSNSSSIQGSPGGPGRTRKIFVGGL 115
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
+KIFVG LP T D + YF +FG DV V D RGFGF+T+ +EE V +
Sbjct: 108 RKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLL 167
Query: 145 RRSHEICGQQVAIDSATPLD-DAGPSQ 170
+ HE+ G+ V + A P + GPS+
Sbjct: 168 KTFHELNGKMVEVKRAVPKELSPGPSR 194
>gi|55956919|ref|NP_112556.2| heterogeneous nuclear ribonucleoprotein A/B isoform a [Homo
sapiens]
gi|426351244|ref|XP_004043165.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 1
[Gorilla gorilla gorilla]
gi|21757498|dbj|BAC05134.1| unnamed protein product [Homo sapiens]
gi|33874222|gb|AAH36708.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|119574227|gb|EAW53842.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_a [Homo
sapiens]
Length = 332
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 214 KKFHTVSGSKCEIKVAQPKE 233
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 146 RSHEICGQQVAIDSATPL 163
+ H + G+ + A +
Sbjct: 131 KEHRLDGRVIDPKKAMAM 148
>gi|410343159|gb|JAA40526.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 332
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 214 KKFHTVSGSKCEIKVAQPKE 233
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 146 RSHEICGQQVAIDSATPLDDAGPSQNFM 173
+ H + G+ + A + A + F+
Sbjct: 131 KEHRLDGRVIDPKKAMAMKKAPVKKIFV 158
>gi|301777376|ref|XP_002924104.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Ailuropoda melanoleuca]
Length = 261
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 83 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLE 142
Query: 145 RRSHEICGQQVAIDSATP 162
++ H I G + I A P
Sbjct: 143 KKFHTISGSKCEIKVAQP 160
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SRR 146
+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V ++
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 147 SHEICGQQVAIDSATPL 163
H + G+ + A +
Sbjct: 61 EHRLDGRVIDPKKAMAM 77
>gi|6648193|gb|AAF21191.1|AC013483_15 putative RNA-binding protein [Arabidopsis thaliana]
Length = 492
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E L+ YFS FG +++ + KD RGFGFV FA+ VA+ V
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFM--MNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD QN + N++ G GGP RT G L
Sbjct: 67 KHNIDGRLVEAKKAVPRDD----QNMVNRSNSSSIQGSPGGPGRTRKIFVGGL 115
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
+KIFVG LP T D + YF +FG DV V D RGFGF+T+ +EE V +
Sbjct: 108 RKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLL 167
Query: 145 RRSHEICGQQVAIDSATPLD-DAGPSQ 170
+ HE+ G+ V + A P + GPS+
Sbjct: 168 KTFHELNGKMVEVKRAVPKELSPGPSR 194
>gi|440898381|gb|ELR49895.1| Heterogeneous nuclear ribonucleoprotein A/B, partial [Bos grunniens
mutus]
Length = 262
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 84 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLE 143
Query: 145 RRSHEICGQQVAIDSATP 162
++ H I G + I A P
Sbjct: 144 KKFHTISGSKCEIKVAQP 161
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 146 RSHEICGQQVAIDSATPL 163
+ H + G+ + A +
Sbjct: 61 KEHRLDGRVIDPKKAMAM 78
>gi|442621136|ref|NP_001262961.1| musashi, isoform H [Drosophila melanogaster]
gi|440217894|gb|AGB96341.1| musashi, isoform H [Drosophila melanogaster]
Length = 567
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG + Q+ +AE+++ YFS+FG + + + D + HRGFGFVTF E V DRV
Sbjct: 224 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 283
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFM 173
H I ++V A P + P+ +
Sbjct: 284 IHFHTIKNKKVECKKAQPKEAVTPAAQLL 312
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + +++ L+ YF+ FG + DV + KDP RGFGF+TF E ++V +
Sbjct: 137 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 196
Query: 147 S-HEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 197 PIHTLDGKKIDPKHATP 213
>gi|350406107|ref|XP_003487656.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Bombus
impatiens]
Length = 426
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VSR 145
K+F+G LP T DLR +F+RFG++++V + D ++ RGFGF++F +E DR V+
Sbjct: 104 KVFLGGLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
Query: 146 RSHEICGQQVAIDSATPLDDA 166
+ G+QV I A P D +
Sbjct: 164 HFVNLNGKQVEIKRAEPRDSS 184
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L+RYF R+G ++D V K+ + RGFGFVTF++ V +
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 147 S-HEICGQQVAIDSATPLDDAGP 168
H++ G+ + P P
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKP 96
>gi|345489599|ref|XP_003426177.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Nasonia vitripennis]
Length = 445
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 13/113 (11%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VSR 145
K+F+G LP T DLR +F RFG++++V + D ++ RGFGF++F +E DR V
Sbjct: 104 KVFLGGLPSNVTETDLRSFFQRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVGE 163
Query: 146 RSHEICGQQVAIDSATPLDDAG------------PSQNFMMNAAETFGGYGGP 186
+ G+QV I A P D + P Q M A G GGP
Sbjct: 164 HFVNLNGKQVEIKRAEPRDSSSKVNDTHQGQWGPPQQGPPMGMAGNMGPMGGP 216
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L+RYFSR+G ++D V K+ + RGFGFVTF++ V +
Sbjct: 14 KLFVGGLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLVLQN 73
Query: 147 S-HEICGQQVAIDSATP 162
H++ G+ + P
Sbjct: 74 GPHQLDGRTIDPKPCNP 90
>gi|30680456|ref|NP_850539.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332641086|gb|AEE74607.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 495
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E L+ YFS FG +++ + KD RGFGFV FA+ VA+ V
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFM--MNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD QN + N++ G GGP RT G L
Sbjct: 67 KHNIDGRLVEAKKAVPRDD----QNMVNRSNSSSIQGSPGGPGRTRKIFVGGL 115
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
+KIFVG LP T D + YF +FG DV V D RGFGF+T+ +EE V +
Sbjct: 108 RKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLL 167
Query: 145 RRSHEICGQQVAIDSATPLD-DAGPSQ 170
+ HE+ G+ V + A P + GPS+
Sbjct: 168 KTFHELNGKMVEVKRAVPKELSPGPSR 194
>gi|328723854|ref|XP_001948745.2| PREDICTED: TAR DNA-binding protein 43-like isoform 1 [Acyrthosiphon
pisum]
Length = 377
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 71 PGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFG 130
P S G G + K+FVGR+ ++ TA+D+R YFS+FG +++V+VPK+P RGF
Sbjct: 165 PKSKEGNGSE---LSGKVFVGRVTEDLTADDIREYFSKFGEVINVFVPKNP----FRGFA 217
Query: 131 FVTFAEEVVADRVSRRSHEICGQQVAIDSATP 162
FVTF + VA + H + V + A P
Sbjct: 218 FVTFLDPEVAASLCGEDHIVKDVSVRVSEAAP 249
>gi|17864096|ref|NP_524577.1| musashi, isoform A [Drosophila melanogaster]
gi|541667|emb|CAA55897.1| musashi [Drosophila melanogaster]
gi|15291915|gb|AAK93226.1| LD31631p [Drosophila melanogaster]
gi|23172305|gb|AAF56478.2| musashi, isoform A [Drosophila melanogaster]
Length = 606
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG + Q+ +AE+++ YFS+FG + + + D + HRGFGFVTF E V DRV
Sbjct: 263 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 322
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFM 173
H I ++V A P + P+ +
Sbjct: 323 IHFHTIKNKKVECKKAQPKEAVTPAAQLL 351
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + +++ L+ YF+ FG + DV + KDP RGFGF+TF E ++V +
Sbjct: 176 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 235
Query: 147 S-HEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 236 PIHTLDGKKIDPKHATP 252
>gi|380017405|ref|XP_003692647.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
florea]
Length = 439
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VSR 145
K+F+G LP T DLR +F+RFG++++V + D ++ RGFGF++F +E DR V+
Sbjct: 104 KVFLGGLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
Query: 146 RSHEICGQQVAIDSATPLDDA 166
+ G+QV I A P D +
Sbjct: 164 HFVNLNGKQVEIKRAEPRDSS 184
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L+RYF R+G ++D V K+ + RGFGFVTF++ V +
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 147 S-HEICGQQVAIDSATPLDDAGP 168
H++ G+ + P P
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKP 96
>gi|340723465|ref|XP_003400110.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Bombus
terrestris]
Length = 443
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VSR 145
K+F+G LP T DLR +F+RFG++++V + D ++ RGFGF++F +E DR V+
Sbjct: 104 KVFLGGLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
Query: 146 RSHEICGQQVAIDSATPLDDA 166
+ G+QV I A P D +
Sbjct: 164 HFVNLNGKQVEIKRAEPRDSS 184
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L+RYF R+G ++D V K+ + RGFGFVTF++ V +
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 147 S-HEICGQQVAIDSATPLDDAGP 168
H++ G+ + P P
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKP 96
>gi|220942596|gb|ACL83841.1| msi-PA [synthetic construct]
Length = 607
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG + Q+ +AE+++ YFS+FG + + + D + HRGFGFVTF E V DRV
Sbjct: 263 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 322
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFM 173
H I ++V A P + P+ +
Sbjct: 323 IHFHTIKNKKVECKKAQPKEAVTPAAQLL 351
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + +++ L+ YF+ FG + DV + KDP RGFGF+TF E ++V +
Sbjct: 176 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 235
Query: 147 S-HEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 236 PIHTLDGKKIDPKHATP 252
>gi|1362732|pir||S56750 single stranded D box binding factor 2 - chicken
Length = 353
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 174 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKVLE 233
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 234 KKFHNVSGSKCEIKVAQPKE 253
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG + D + DP RGFGF+ F E ++V +
Sbjct: 91 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 150
Query: 146 RSHEICGQQVAIDSATPL 163
+ H + G+ + A +
Sbjct: 151 KEHRLDGRLIDPKKAMAM 168
>gi|345489601|ref|XP_001600266.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Nasonia vitripennis]
Length = 376
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 13/113 (11%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VSR 145
K+F+G LP T DLR +F RFG++++V + D ++ RGFGF++F +E DR V
Sbjct: 104 KVFLGGLPSNVTETDLRSFFQRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVGE 163
Query: 146 RSHEICGQQVAIDSATPLDDAG------------PSQNFMMNAAETFGGYGGP 186
+ G+QV I A P D + P Q M A G GGP
Sbjct: 164 HFVNLNGKQVEIKRAEPRDSSSKVNDTHQGQWGPPQQGPPMGMAGNMGPMGGP 216
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L+RYFSR+G ++D V K+ + RGFGFVTF++ V +
Sbjct: 14 KLFVGGLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLVLQN 73
Query: 147 S-HEICGQQVAIDSATP 162
H++ G+ + P
Sbjct: 74 GPHQLDGRTIDPKPCNP 90
>gi|348551765|ref|XP_003461700.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Cavia
porcellus]
Length = 327
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGDFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H I G + I A P +
Sbjct: 214 KKFHTISGSKCEIKVAQPKE 233
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKVLDQ 130
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 131 KEHRLDGRVI 140
>gi|4938503|emb|CAB43861.1| hnRNP-like protein [Arabidopsis thaliana]
gi|7269517|emb|CAB79520.1| hnRNP-like protein [Arabidopsis thaliana]
Length = 524
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 80/189 (42%), Gaps = 44/189 (23%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDD------FRPVGRM--SHGGYGAYNAYISA 55
D E +++D H + G TV +A P++D P+ + SHGG G
Sbjct: 58 DPSVAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGG------- 110
Query: 56 ATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDV 115
GA T KKIFVG LP T + + YF +FG I DV
Sbjct: 111 -------GART-------------------KKIFVGGLPSSITEAEFKNYFDQFGTIADV 144
Query: 116 YVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP--LDDAGPSQNF 172
V D RGFGF+TF E D V ++ HE+ G+ V + A P L P+++
Sbjct: 145 VVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMVEVKRAVPKELSSTTPNRSP 204
Query: 173 MMNAAETFG 181
++ +G
Sbjct: 205 LIGYGNNYG 213
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 12/126 (9%)
Query: 79 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEV 138
ES+ +GK +F+G + + E L+ YF ++G +++ + +D RGFGF+ FA+
Sbjct: 2 ESASDLGK-LFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPS 60
Query: 139 VADRVSRRSHEICGQQVAIDSATPLDD-------AGPSQNFMMNAAETFGGYGGPMRTYG 191
VA+RV H I G+ V A P DD A P M + + GG GG RT
Sbjct: 61 VAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASP----MHLISPSHGGNGGGARTKK 116
Query: 192 RMYGSL 197
G L
Sbjct: 117 IFVGGL 122
>gi|332822801|ref|XP_518142.3| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pan
troglodytes]
Length = 338
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 160 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 219
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 220 KKFHTVSGSKCEIKVAQPKE 239
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 77 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 136
Query: 146 RSHEICGQQVAIDSATPL 163
+ H + G+ + A +
Sbjct: 137 KEHRLDGRVIDPKKAMAM 154
>gi|62898411|dbj|BAD97145.1| heterogeneous nuclear ribonucleoprotein AB isoform a variant [Homo
sapiens]
Length = 332
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 214 KKFHTVSGSKCEIKVAQPKE 233
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 146 RSHEICGQQVAIDSATPL 163
+ H + G+ + A +
Sbjct: 131 KEHRLDGRVIDPKKAMAM 148
>gi|328779568|ref|XP_393451.4| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
mellifera]
Length = 442
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VSR 145
K+F+G LP T DLR +F+RFG++++V + D ++ RGFGF++F +E DR V+
Sbjct: 104 KVFLGGLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
Query: 146 RSHEICGQQVAIDSATPLDDA 166
+ G+QV I A P D +
Sbjct: 164 HFVNLNGKQVEIKRAEPRDSS 184
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L+RYF R+G ++D V K+ + RGFGFVTF++ V +
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 147 S-HEICGQQVAIDSATPLDDAGP 168
H++ G+ + P P
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKP 96
>gi|328723850|ref|XP_003247957.1| PREDICTED: TAR DNA-binding protein 43-like isoform 2 [Acyrthosiphon
pisum]
gi|328723852|ref|XP_003247958.1| PREDICTED: TAR DNA-binding protein 43-like isoform 3 [Acyrthosiphon
pisum]
Length = 392
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 71 PGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFG 130
P S G G + K+FVGR+ ++ TA+D+R YFS+FG +++V+VPK+P RGF
Sbjct: 180 PKSKEGNG---SELSGKVFVGRVTEDLTADDIREYFSKFGEVINVFVPKNP----FRGFA 232
Query: 131 FVTFAEEVVADRVSRRSHEICGQQVAIDSATP 162
FVTF + VA + H + V + A P
Sbjct: 233 FVTFLDPEVAASLCGEDHIVKDVSVRVSEAAP 264
>gi|332019507|gb|EGI59986.1| Heterogeneous nuclear ribonucleoprotein 27C [Acromyrmex echinatior]
Length = 340
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 63/111 (56%), Gaps = 11/111 (9%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VSR 145
K+F+G LP T DLR YF+RFG++++V + D ++ RGFGF++F +E DR V+
Sbjct: 91 KVFLGGLPSNVTETDLRSYFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEEAVDRCVAE 150
Query: 146 RSHEICGQQVAI---DSATPLDDA-----GPSQNF--MMNAAETFGGYGGP 186
+ G+QV I +S++ ++D+ GP Q M A G GGP
Sbjct: 151 HFVNLNGKQVEIKRAESSSKMNDSHQGQWGPPQQGGPPMGMAGNMGPMGGP 201
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L+RYF R+G ++D V K+ + RGFGFVTF++ V +
Sbjct: 1 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVSLVLQN 60
Query: 147 S-HEICGQQVAIDSATP 162
H++ G+ + P
Sbjct: 61 GPHQLDGRTIDPKPCNP 77
>gi|195036632|ref|XP_001989774.1| GH18982 [Drosophila grimshawi]
gi|193893970|gb|EDV92836.1| GH18982 [Drosophila grimshawi]
Length = 641
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG + Q+ +AE+++ YFS+FG + + + D + HRGFGFVTF E V DRV
Sbjct: 287 KKIFVGGVSQDTSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 346
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFM 173
H I ++V A P + P+ +
Sbjct: 347 IHFHTIKNKKVECKKAQPKEAVTPAAQLL 375
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + +++ L+ YF+ FG + DV + KDP RGFGF+TF E D+V +
Sbjct: 200 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 259
Query: 147 S-HEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 260 PIHTLDGKKIDPKHATP 276
>gi|431892736|gb|ELK03169.1| Heterogeneous nuclear ribonucleoprotein A/B [Pteropus alecto]
Length = 230
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 52 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPVDPKSNKRRGFVFITFKEEEPVKKVLE 111
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H I G + I A P +
Sbjct: 112 KKFHTISGSKCEIKVAQPKE 131
>gi|402586077|gb|EJW80015.1| hypothetical protein WUBG_09077, partial [Wuchereria bancrofti]
Length = 116
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KK+F+G L +T ED++ YF ++G++ D + D HRGFGF+TF + V+D+V
Sbjct: 6 KKVFIGGLSATSTLEDMKNYFEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDDVSDKVCE 65
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYG-GPMRTYGRM 193
HEI G+ V A P + P Q AA YG GP + G +
Sbjct: 66 IHFHEINGKMVECKKAQPKEVMLPVQLNKSRAAAARSLYGLGPEQLLGTL 115
>gi|297829340|ref|XP_002882552.1| hypothetical protein ARALYDRAFT_478119 [Arabidopsis lyrata subsp.
lyrata]
gi|297328392|gb|EFH58811.1| hypothetical protein ARALYDRAFT_478119 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E L+ YFS FG +++ + KD RGFGFV FA+ VA+ V
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFM--MNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD QN + N++ G GGP RT G L
Sbjct: 67 KHNIDGRLVEAKKAVPRDD----QNMVNRSNSSSIQGSPGGPGRTRKIFVGGL 115
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
+KIFVG LP T D + YF +FG DV V D RGFGF+T+ +EE V +
Sbjct: 108 RKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLL 167
Query: 145 RRSHEICGQQVAIDSATPLD-DAGPSQ 170
+ HE+ G+ V + A P + GPS+
Sbjct: 168 KTFHELNGKMVEVKRAVPKELSPGPSR 194
>gi|395861189|ref|XP_003802876.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Otolemur
garnettii]
Length = 332
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGDFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H I G + I A P +
Sbjct: 214 KKFHTISGSKCEIKVAQPKE 233
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 131 KEHRLDGRVI 140
>gi|442621132|ref|NP_001262959.1| musashi, isoform E [Drosophila melanogaster]
gi|440217892|gb|AGB96339.1| musashi, isoform E [Drosophila melanogaster]
Length = 618
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG + Q+ +AE+++ YFS+FG + + + D + HRGFGFVTF E V DRV
Sbjct: 275 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 334
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFM 173
H I ++V A P + P+ +
Sbjct: 335 IHFHTIKNKKVECKKAQPKEAVTPAAQLL 363
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + +++ L+ YF+ FG + DV + KDP RGFGF+TF E ++V +
Sbjct: 188 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 247
Query: 147 S-HEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 248 PIHTLDGKKIDPKHATP 264
>gi|9758187|dbj|BAB08572.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 473
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 69/163 (42%), Gaps = 45/163 (27%)
Query: 9 ENLMVDTHELGGSTVVVDRATPKEDD------FRPVGRMS--HGGYGAYNAYISAATRYA 60
E +++D H + G TV +A P++D P+ MS HGG G
Sbjct: 61 ERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRT----------- 109
Query: 61 ALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKD 120
KKIFVG LP T E+ + YF +FG I DV V D
Sbjct: 110 -------------------------KKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYD 144
Query: 121 PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP 162
RGFGF+TF + DRV ++ HE+ G+ V + A P
Sbjct: 145 HNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAVP 187
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E LR YFS +G +++ + +D RGFGF+ FA+ V++RV
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 KHIIDGRTVEAKKAVPRDD 85
>gi|3377279|dbj|BAA32032.1| AlF-C1 [Rattus norvegicus]
Length = 331
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF +FG I + +P DPK RGF F+TF EE +V
Sbjct: 158 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 217
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 218 KKFHTVSGSKCEIKVAQPKE 237
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 75 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 134
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 135 KEHRLDGRVI 144
>gi|291387921|ref|XP_002710458.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Oryctolagus
cuniculus]
Length = 306
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 128 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEDPVKKVLE 187
Query: 145 RRSHEICGQQVAIDSATP 162
++ H I G + I A P
Sbjct: 188 KKFHTISGSKCEIKVAQP 205
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 45 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKVLDQ 104
Query: 146 RSHEICGQQVAIDSATPL 163
+ H + G+ + A +
Sbjct: 105 KEHRLDGRVIDPKKAMAM 122
>gi|194387362|dbj|BAG60045.1| unnamed protein product [Homo sapiens]
Length = 323
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 145 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 204
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 205 KKFHTVSGSKCEIKVAQPKE 224
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 62 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 121
Query: 146 RSHEICGQQVAIDSATPL 163
+ H + G+ + A +
Sbjct: 122 KEHRLDGRVIDPKKAMAM 139
>gi|326489793|dbj|BAK01877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T D R YF +FG I DV V D RGFGF+T+ E D+
Sbjct: 106 KKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF 165
Query: 146 RS-HEICGQQVAIDSATPLD-DAGPSQ-------NFMMNAAETF 180
++ HE+ G+ V + A P + GPS N++MN A +F
Sbjct: 166 KTFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSF 209
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + + LR YF ++G +++ + +D RGFGF+ FA+ VA+RV
Sbjct: 7 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD Q + + + G GP RT G L
Sbjct: 67 KHMIDGRMVEAKKAVPRDD----QQALSKSGGSAHGSPGPSRTKKIFVGGL 113
>gi|195451832|ref|XP_002073095.1| GK13337 [Drosophila willistoni]
gi|194169180|gb|EDW84081.1| GK13337 [Drosophila willistoni]
Length = 353
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E++R YFS+FG I++V +P D +++ +GF F+TF +E+VV D +
Sbjct: 147 KIFVGGLTTEISDEEIRTYFSQFGTIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 206
Query: 146 RSHEICGQQVAIDSATP 162
+I G++V + ATP
Sbjct: 207 PKQKISGKEVDVKRATP 223
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVG L E T ++LR +F +FG I + V DP+ RGF F+ F D+VS
Sbjct: 66 RKLFVGGLSWETTEKELRDHFGKFGDIDSINVKTDPQTGRSRGFAFIVFTNTEAIDKVSS 125
Query: 146 -RSHEICGQQV 155
H I G++V
Sbjct: 126 AEEHVINGKKV 136
>gi|28571891|ref|NP_733108.2| musashi, isoform B [Drosophila melanogaster]
gi|386766502|ref|NP_001247303.1| musashi, isoform C [Drosophila melanogaster]
gi|442621134|ref|NP_001262960.1| musashi, isoform F [Drosophila melanogaster]
gi|28381465|gb|AAN14056.2| musashi, isoform B [Drosophila melanogaster]
gi|383292949|gb|AFH06620.1| musashi, isoform C [Drosophila melanogaster]
gi|383505544|gb|AFH36351.1| FI20028p1 [Drosophila melanogaster]
gi|440217893|gb|AGB96340.1| musashi, isoform F [Drosophila melanogaster]
Length = 634
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG + Q+ +AE+++ YFS+FG + + + D + HRGFGFVTF E V DRV
Sbjct: 291 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 350
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFM 173
H I ++V A P + P+ +
Sbjct: 351 IHFHTIKNKKVECKKAQPKEAVTPAAQLL 379
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + +++ L+ YF+ FG + DV + KDP RGFGF+TF E ++V +
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 263
Query: 147 S-HEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 264 PIHTLDGKKIDPKHATP 280
>gi|444706633|gb|ELW47959.1| Heterogeneous nuclear ribonucleoprotein A/B [Tupaia chinensis]
Length = 219
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 45 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 104
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H I G + I A P +
Sbjct: 105 KKFHTISGSKCEIKVAQPKE 124
>gi|386766504|ref|NP_001247304.1| musashi, isoform D [Drosophila melanogaster]
gi|383292950|gb|AFH06621.1| musashi, isoform D [Drosophila melanogaster]
Length = 605
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG + Q+ +AE+++ YFS+FG + + + D + HRGFGFVTF E V DRV
Sbjct: 262 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 321
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFM 173
H I ++V A P + P+ +
Sbjct: 322 IHFHTIKNKKVECKKAQPKEAVTPAAQLL 350
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + +++ L+ YF+ FG + DV + KDP RGFGF+TF E ++V +
Sbjct: 175 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 234
Query: 147 S-HEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 235 PIHTLDGKKIDPKHATP 251
>gi|21430706|gb|AAM51031.1| RH49436p [Drosophila melanogaster]
Length = 634
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG + Q+ +AE+++ YFS+FG + + + D + HRGFGFVTF E V DRV
Sbjct: 291 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 350
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFM 173
H I ++V A P + P+ +
Sbjct: 351 IHFHTIKNKKVECKKAQPKEAVTPAAQLL 379
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + +++ L+ YF+ FG + DV + KDP RGFGF+TF E ++V +
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 263
Query: 147 S-HEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 264 PIHTLDGKKIDPKHATP 280
>gi|195349467|ref|XP_002041266.1| GM10251 [Drosophila sechellia]
gi|194122961|gb|EDW45004.1| GM10251 [Drosophila sechellia]
Length = 634
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG + Q+ +AE+++ YFS+FG + + + D + HRGFGFVTF E V DRV
Sbjct: 291 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 350
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFM 173
H I ++V A P + P+ +
Sbjct: 351 IHFHTIKNKKVECKKAQPKEAVTPAAQLL 379
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + +++ L+ YF+ FG + DV + KDP RGFGF+TF E ++V +
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 263
Query: 147 S-HEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 264 PIHTLDGKKIDPKHATP 280
>gi|293334069|ref|NP_001168848.1| uncharacterized protein LOC100382653 [Zea mays]
gi|392351175|ref|XP_003750865.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform
2 [Rattus norvegicus]
gi|6562845|emb|CAB62553.1| heterogeneous nuclear ribonucleoprotein [Rattus norvegicus]
gi|149052496|gb|EDM04313.1| rCG34663, isoform CRA_a [Rattus norvegicus]
gi|223973327|gb|ACN30851.1| unknown [Zea mays]
Length = 332
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF +FG I + +P DPK RGF F+TF EE +V
Sbjct: 159 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 218
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 219 KKFHTVSGSKCEIKVAQPKE 238
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 136 KEHRLDGRVI 145
>gi|449299976|gb|EMC95989.1| hypothetical protein BAUCODRAFT_511421 [Baudoinia compniacensis
UAMH 10762]
Length = 454
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 43/79 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG + QEA+ +D +F RFG +LD + D + RGFGFVTF E DR
Sbjct: 84 KIFVGGVSQEASQDDFANFFRRFGNVLDATLMMDKETGRPRGFGFVTFDSEAAVDRTLES 143
Query: 147 SHEICGQQVAIDSATPLDD 165
ICG+ + + A P D
Sbjct: 144 PLAICGKNIEVKRAQPRGD 162
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+F+G L E T E L+ YFS+FG +++ V +D RGFGF+TF + V + V +
Sbjct: 1 MFIGGLNWETTDESLKNYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKVVNTVMVKE 60
Query: 148 HEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 61 HTLDGKLIDPKRAIPRDE 78
>gi|356514529|ref|XP_003525958.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 378
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG LP + E+ + YF RFGRI DV V +D RGFGF+TF +E+ V + +
Sbjct: 128 KKIFVGGLPAGISEEEFKNYFERFGRITDVVVMQDSVTHRPRGFGFITFESEDSVQNVMV 187
Query: 145 RRSHEICGQQVAIDSATP 162
+ H++ G+QV + A P
Sbjct: 188 KSFHDLNGRQVEVKRAVP 205
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + ++ T + L+ +F+++G + D + D RGFGFVTF++ AD+ +
Sbjct: 11 KLFVGGISRDTTEDVLKLHFAKYGVVSDSTISVDRTTRSPRGFGFVTFSDLSAADKALQD 70
Query: 147 SHEICGQQVAIDSATPLDDAGPSQN 171
+H I G+ V + A P + QN
Sbjct: 71 THVILGRTVEVKKAIPRSEQHQHQN 95
>gi|332265255|ref|XP_003281643.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Nomascus
leucogenys]
Length = 261
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 83 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 142
Query: 145 RRSHEICGQQVAIDSATP 162
++ H I G + I A P
Sbjct: 143 KKFHTISGSKCEIKVAQP 160
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SRR 146
+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V ++
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 147 SHEICGQQVAIDSATPL 163
H + G+ + A +
Sbjct: 61 EHRLDGRVIDPKKAMAM 77
>gi|193688245|ref|XP_001946219.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog [Acyrthosiphon pisum]
Length = 350
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
+K+FVG L + T E+L++YF ++G I+DV V KDP+ RGFGF+T+ A +V D
Sbjct: 8 RKLFVGGLDYKTTDENLKKYFEQWGEIMDVVVMKDPQTKRSRGFGFITYAAAHMVDDAQG 67
Query: 145 RRSHEICGQQVAIDSATPLDDAG 167
R H+I G+ V A P D G
Sbjct: 68 ARPHKIDGRTVEPKRAVPKTDIG 90
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 71 PGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFG 130
P + G+ E+ + KK+FVG L T EDL+ YFS +G + + + RGFG
Sbjct: 85 PKTDIGKPEAGATV-KKLFVGLLNDSITEEDLKEYFSPYGNVTSAALVVHKETGKKRGFG 143
Query: 131 FVTFAEEVVADRVSRR-SHEICGQQVAIDSATPLDD-AGPSQNFMMNAAETFG-----GY 183
FV F + D++ + SH I G+++ + A ++ A + N+A+ +G +
Sbjct: 144 FVEFDDYDPVDKICLKGSHIIKGKKIDVKKALSKEEMARVNARNNSNSADNWGSDNRNAW 203
Query: 184 GGPMRTYGRMYG---SLDFDDWGYGMGS-----GRPSRGDW 216
MR +GR G D D W G S G PS W
Sbjct: 204 EPTMRNFGRGGGWRSGNDPDPWESGPSSRGGNWGGPSTSAW 244
>gi|194741664|ref|XP_001953309.1| GF17697 [Drosophila ananassae]
gi|190626368|gb|EDV41892.1| GF17697 [Drosophila ananassae]
Length = 634
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG + Q+ +AE+++ YFS+FG + + + D + HRGFGFVTF E V DRV
Sbjct: 293 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 352
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFM 173
H I ++V A P + P+ +
Sbjct: 353 IHFHTIKNKKVECKKAQPKEAVTPAAQLL 381
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + +++ L+ YF+ FG + DV + KDP RGFGF+TF E +V +
Sbjct: 206 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVQKVLKV 265
Query: 147 S-HEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 266 PIHTLDGKKIDPKHATP 282
>gi|355691911|gb|EHH27096.1| hypothetical protein EGK_17210, partial [Macaca mulatta]
gi|355750475|gb|EHH54813.1| hypothetical protein EGM_15724, partial [Macaca fascicularis]
Length = 262
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 84 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 143
Query: 145 RRSHEICGQQVAIDSATP 162
++ H I G + I A P
Sbjct: 144 KKFHTISGSKCEIKVAQP 161
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 146 RSHEICGQQVAIDSATPL 163
+ H + G+ + A +
Sbjct: 61 KEHRLDGRVIDPKKAMAM 78
>gi|410343157|gb|JAA40525.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 285
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 214 KKFHTVSGSKCEIKVAQPKE 233
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 146 RSHEICGQQVAIDSATPLDDAGPSQNFM 173
+ H + G+ + A + A + F+
Sbjct: 131 KEHRLDGRVIDPKKAMAMKKAPVKKIFV 158
>gi|281353447|gb|EFB29031.1| hypothetical protein PANDA_013362 [Ailuropoda melanoleuca]
Length = 316
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 138 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLE 197
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H I G + I A P +
Sbjct: 198 KKFHTISGSKCEIKVAQPKE 217
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q+ +K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + +
Sbjct: 50 QKPPRKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVE 109
Query: 142 RV-SRRSHEICGQQV 155
+V ++ H + G+ +
Sbjct: 110 KVLDQKEHRLDGRVI 124
>gi|195504299|ref|XP_002099019.1| GE23609 [Drosophila yakuba]
gi|194185120|gb|EDW98731.1| GE23609 [Drosophila yakuba]
Length = 637
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG + Q+ +AE+++ YFS+FG + + + D + HRGFGFVTF E V DRV
Sbjct: 294 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 353
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFM 173
H I ++V A P + P+ +
Sbjct: 354 IHFHTIKNKKVECKKAQPKEAVTPAAQLL 382
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + +++ L+ YF+ FG + DV + KDP RGFGF+TF E ++V +
Sbjct: 207 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 266
Query: 147 S-HEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 267 PIHTLDGKKIDPKHATP 283
>gi|194908488|ref|XP_001981778.1| GG11413 [Drosophila erecta]
gi|190656416|gb|EDV53648.1| GG11413 [Drosophila erecta]
Length = 635
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG + Q+ +AE+++ YFS+FG + + + D + HRGFGFVTF E V DRV
Sbjct: 292 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 351
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFM 173
H I ++V A P + P+ +
Sbjct: 352 IHFHTIKNKKVECKKAQPKEAVTPAAQLL 380
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + +++ L+ YF+ FG + DV + KDP RGFGF+TF E ++V +
Sbjct: 205 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 264
Query: 147 S-HEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 265 PIHTLDGKKIDPKHATP 281
>gi|390178414|ref|XP_001359012.3| GA14206, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859439|gb|EAL28155.3| GA14206, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 310
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E+++ YFS+FG I++V +P D +++ +GF F+TF +E+VV D +
Sbjct: 136 KIFVGGLTTEISDEEIKTYFSQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 195
Query: 146 RSHEICGQQVAIDSATP 162
+I G++V + ATP
Sbjct: 196 PKQKISGKEVDVKRATP 212
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 72 GSFYGRGESSQRIG-KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFG 130
GS + S+QR +K+FVG L E T ++LR +F +FG I + V DP+ RGF
Sbjct: 40 GSEHTSAVSNQRDDDRKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFA 99
Query: 131 FVTFAEEVVADRVSRRSHEICGQQ 154
F+ F D+VS I +
Sbjct: 100 FIVFTNTEAIDKVSSAGEHIINSK 123
>gi|357148248|ref|XP_003574688.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
[Brachypodium distachyon]
Length = 359
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG LP++ T +++F ++G I+D + K+ + RGFGF+T+A+ V D V
Sbjct: 23 KIFVGGLPRDTTPAVFQKHFGQYGEIIDSVIMKNKHTSQPRGFGFITYADPAVVDHVMED 82
Query: 147 SHEICGQQVAIDSATPLD 164
SH I G+QV I P D
Sbjct: 83 SHVINGKQVEIKRTIPKD 100
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP T +D + +F ++G ++D + +D + RGFGFV F E V D +
Sbjct: 112 KKIFVGGLPSTLTEDDFKDFFEKYGTVVDHQIMRDHQTRRSRGFGFVVFCSEQVVDDLLA 171
Query: 146 RSH--EICGQQVAIDSATPLDDAGP 168
+ ++ G +V I A P + P
Sbjct: 172 NGNMIDLAGSKVEIKKAEPKKSSNP 196
>gi|224114443|ref|XP_002316761.1| predicted protein [Populus trichocarpa]
gi|222859826|gb|EEE97373.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 34/173 (19%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E ++++ H + G TV +A P++D +I + + G
Sbjct: 56 DLTVAERVIMEKHVIDGRTVEAKKAVPRDDQ-----------------HILSRSISNIHG 98
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+P G G + KKIFVG L T + ++YF ++G I+DV V D
Sbjct: 99 SP----------GPGRT-----KKIFVGGLASTVTENEFKKYFEQYGIIIDVVVMYDHNT 143
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD-DAGPSQNFMM 174
RGFGF+T+ E DRV ++ HE+ G+ V + A P + GPS++ +M
Sbjct: 144 QRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPKELSPGPSRSPLM 196
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E L+ YFS++G +++ + +D RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRATGRARGFGFVVFADLTVAERVIME 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD Q+ + + G GP RT G L
Sbjct: 67 KHVIDGRTVEAKKAVPRDD----QHILSRSISNIHGSPGPGRTKKIFVGGL 113
>gi|55956921|ref|NP_004490.2| heterogeneous nuclear ribonucleoprotein A/B isoform b [Homo
sapiens]
gi|426351246|ref|XP_004043166.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 2
[Gorilla gorilla gorilla]
gi|12803583|gb|AAH02625.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|13528732|gb|AAH04561.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|13905354|gb|AAH01616.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|14424683|gb|AAH09359.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|119574228|gb|EAW53843.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|119574229|gb|EAW53844.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|119574230|gb|EAW53845.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|193786114|dbj|BAG51397.1| unnamed protein product [Homo sapiens]
gi|208966452|dbj|BAG73240.1| heterogeneous nuclear ribonucleoprotein A/B [synthetic construct]
Length = 285
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 214 KKFHTVSGSKCEIKVAQPKE 233
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 131 KEHRLDGRVI 140
>gi|410225698|gb|JAA10068.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410260868|gb|JAA18400.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410299216|gb|JAA28208.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 285
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 214 KKFHTVSGSKCEIKVAQPKE 233
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 131 KEHRLDGRVI 140
>gi|357122209|ref|XP_003562808.1| PREDICTED: uncharacterized protein LOC100836006 [Brachypodium
distachyon]
Length = 472
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + E E LR YF RFG + + + +D RGFGF+ FAE VA+RV+
Sbjct: 7 KLFVGGISWETDEERLREYFGRFGEVTEAVIMRDRNTGRARGFGFIVFAEPGVAERVTMD 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD Q+ + G GP+RT G L
Sbjct: 67 KHMIDGRMVEAKKAVPRDD----QSIASKNNGSSIGSPGPVRTRKIFVGGL 113
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 95/229 (41%), Gaps = 64/229 (27%)
Query: 8 VENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAPTL 67
E + +D H + G V +A P++D I++ +++G+P
Sbjct: 60 AERVTMDKHMIDGRMVEAKKAVPRDDQ-----------------SIASKNNGSSIGSP-- 100
Query: 68 YDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHR 127
G R KIFVG L T + RRYF +FG I DV V D R
Sbjct: 101 ----------GPVRTR---KIFVGGLASNVTEVEFRRYFEQFGMITDVVVMYDHNTQRPR 147
Query: 128 GFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDDA-GP-------SQNFMMNAAE 178
GFGF+T+ E D+ ++ HE+ G+ V + A P + + GP QN+ ++
Sbjct: 148 GFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPKEQSPGPVARSPAGGQNYAISRVH 207
Query: 179 TF-------------GGYGGPMRTYGRMYGSLD-----FDDW--GYGMG 207
F GGYG MR GR +G L F + GYGMG
Sbjct: 208 NFLNGFNQGYNPNPIGGYG--MRVDGR-FGLLSGARNGFSSFGPGYGMG 253
>gi|45384514|ref|NP_990659.1| heterogeneous nuclear ribonucleoprotein A/B [Gallus gallus]
gi|515838|emb|CAA56586.1| single stranded D box binding factor [Gallus gallus]
Length = 302
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 174 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKVLE 233
Query: 145 RRSHEICGQQVAIDSATP 162
++ H + G + I A P
Sbjct: 234 KKFHNVSGSKCEIKVAQP 251
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG + D + DP RGFGF+ F E ++V +
Sbjct: 91 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 150
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 151 KEHRLDGRLI 160
>gi|449468578|ref|XP_004151998.1| PREDICTED: DAZ-associated protein 1-like [Cucumis sativus]
gi|449509419|ref|XP_004163583.1| PREDICTED: DAZ-associated protein 1-like [Cucumis sativus]
Length = 436
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP T + R+YF +G++ DV + D RGFGF+TF E DRV
Sbjct: 110 KKIFVGGLPSALTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLY 169
Query: 146 RS-HEICGQQVAIDSATPLD 164
+S HE+ G+ V + A P D
Sbjct: 170 KSFHELNGKLVEVKRALPKD 189
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + + E LR YFS+FG ++ + +D RGFGFV F++ + D+V +
Sbjct: 7 KLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLLDQVLQD 66
Query: 147 SHEICGQQV 155
H I G+QV
Sbjct: 67 KHTIDGRQV 75
>gi|410914854|ref|XP_003970902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Takifugu rubripes]
Length = 307
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KKIFVG L EAT E++R YF +G I ++ +P DPK RGF F+T+ EE A + +
Sbjct: 140 KKIFVGGLIPEATEENIREYFGEYGEIENIELPLDPKSNKRRGFIFITYKEEASAKKCLE 199
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFG-GYGGPMRTYGRMYGS 196
+ H I G + + A P + Q + G GYGG + + + YG+
Sbjct: 200 NKFHTIEGSRCELKLAQPKEVYQQQQYRGRSGGSRAGWGYGGNNQGWNQGYGN 252
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 10/108 (9%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG + D + D RGFGFV F + ++V +
Sbjct: 57 KMFVGGLSWDTSKKDLKDYFTKFGEVSDCTIKFDSDSGRSRGFGFVLFKDPSSVEKVLEQ 116
Query: 146 RSHEICGQQVAIDSATPLDDAGPSQNFM---------MNAAETFGGYG 184
+ H + G+ + A + + F+ N E FG YG
Sbjct: 117 KEHRLDGRLIDPKRAMAMKKEPVKKIFVGGLIPEATEENIREYFGEYG 164
>gi|195500849|ref|XP_002097550.1| GE24428 [Drosophila yakuba]
gi|194183651|gb|EDW97262.1| GE24428 [Drosophila yakuba]
Length = 345
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E T E+++ YF +FG I++V +P D +++ +GF F+TF +E+VV D +
Sbjct: 137 KIFVGGLTTEITDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 196
Query: 146 RSHEICGQQVAIDSATP 162
+I G++V + ATP
Sbjct: 197 PKQKIAGKEVDVKRATP 213
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVG L E T ++LR +F ++G I + V DP+ RGF F+ F D+VS
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 146 RSHEICGQQ 154
I +
Sbjct: 116 VDEHIINSK 124
>gi|146260280|ref|NP_001041526.1| heterogeneous nuclear ribonucleoprotein A/B isoform 1 [Mus
musculus]
gi|89275690|gb|ABD66224.1| S1 protein C2 [Mus musculus]
gi|148701714|gb|EDL33661.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_a [Mus
musculus]
Length = 332
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF +FG I + +P DPK RGF F+TF EE +V
Sbjct: 159 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 218
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 219 KKFHTVSGSKCEIKVAQPKE 238
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 136 KEHRLDGRVI 145
>gi|195156455|ref|XP_002019115.1| GL26194 [Drosophila persimilis]
gi|194115268|gb|EDW37311.1| GL26194 [Drosophila persimilis]
Length = 223
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+F+G LP T DLR +F R+G++ +V + D ++ RGFGF++F EE + V+
Sbjct: 95 GYKVFLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVT 154
Query: 145 -RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 195
R + G+QV I A P D +G QN + T GG G M + +G
Sbjct: 155 NERYINLNGKQVEIKKAEPRDGSG-GQN---SNNSTVGGAYGKMNSECSHWG 202
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L RYF RFG I+D V K+ + RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 147 S-HEICGQQVAIDSATPLDDAGPSQ 170
H + G+ + P P +
Sbjct: 68 GPHTLDGRTIDPKPCNPRTLQKPKK 92
>gi|356551592|ref|XP_003544158.1| PREDICTED: uncharacterized protein LOC100795907 [Glycine max]
Length = 479
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E LR YFS +G +++ + KD RGFGFV F++ +A+ V +
Sbjct: 7 KLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDPAIAEIVIKE 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD QN + + + G GP RT G L
Sbjct: 67 KHNIDGRMVEAKKAVPRDD----QNILSRNSGSIHGSPGPGRTRKIFVGGL 113
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+KIFVG L T D ++YF +FG I DV V D RGFGF+T+ E D+V
Sbjct: 106 RKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLL 165
Query: 146 RS-HEICGQQVAIDSATPLD-DAGPSQ 170
++ HE+ G+ V + A P + GPS+
Sbjct: 166 KTFHELNGKMVEVKRAVPKELSPGPSR 192
>gi|449533873|ref|XP_004173895.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like,
partial [Cucumis sativus]
Length = 270
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 84 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADR 142
+ +KIFVG LP+E T+ ++F +G I D + KD ++TGH RGFGFVT+A+ V D+
Sbjct: 4 VCRKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKD-RKTGHPRGFGFVTYADPSVVDK 62
Query: 143 VSRRSHEICGQQVAIDSATP 162
V +H I G+QV I P
Sbjct: 63 VIEDTHIINGKQVEIKRTIP 82
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 77 RGESSQR--IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF 134
+G SS R KKIFVG +P ++ R +F ++G + + + +D + RGFGF+TF
Sbjct: 83 KGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITF 142
Query: 135 AEEVVADRVSRRSH--EICGQQVAIDSA 160
E D + + E+ G QV I A
Sbjct: 143 ETEQAVDDLLANGNRLEMAGSQVEIKKA 170
>gi|74225210|dbj|BAE38291.1| unnamed protein product [Mus musculus]
Length = 325
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF +FG I + +P DPK RGF F+TF EE +V
Sbjct: 152 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 211
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 212 KKFHTVSGSKCEIKVAQPKE 231
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 128
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 129 KEHRLDGRVI 138
>gi|198453793|ref|XP_002137742.1| GA27393 [Drosophila pseudoobscura pseudoobscura]
gi|198132515|gb|EDY68300.1| GA27393 [Drosophila pseudoobscura pseudoobscura]
Length = 643
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG + Q+ +AE+++ YF++FG + + + D + HRGFGFVTF E V DRV
Sbjct: 298 KKIFVGGVSQDTSAEEVKAYFAQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 357
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFM 173
H I ++V A P + P+ +
Sbjct: 358 IHFHTIKNKKVECKKAQPKESVTPAAQLL 386
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + +++ L+ YF+ FG + DV + KDP RGFGF+TF + ++V +
Sbjct: 211 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQDPCTVEKVLKV 270
Query: 147 S-HEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 271 PIHTLDGKKIDPKHATP 287
>gi|344265339|ref|XP_003404742.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A/B-like [Loxodonta africana]
Length = 332
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+T+ EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITYKEEEPVKKVLE 213
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 214 KKFHTVSGSKCEIKVAQPKE 233
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 60 AALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK 119
AA A T Y G ++ + GK +FVG L + + +DL+ YF++FG ++D +
Sbjct: 45 AAPPAGTQYSAEGDQINASKNEEDAGK-MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKM 103
Query: 120 DPKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQV 155
DP RGFGF+ F + ++V ++ H + G+ +
Sbjct: 104 DPNTGRSRGFGFILFKDATSVEKVLDQKEHRLDGRVI 140
>gi|255560914|ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
gi|223539369|gb|EEF40960.1| RNA binding protein, putative [Ricinus communis]
Length = 2256
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 74 FYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVT 133
FY R E+ +R KIF+G L +E T ++F ++G I D + KD K RGFGFVT
Sbjct: 1919 FYKR-EARRR---KIFIGGLARETTTAQFVKHFGKYGEITDSVIMKDRKTGQPRGFGFVT 1974
Query: 134 FAEEVVADRVSRRSHEICGQQVAIDSATP 162
+A+ V D+V + SH I G+QV I P
Sbjct: 1975 YADPSVVDQVIQDSHVINGKQVEIKRTIP 2003
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG +P T + + +F ++G +++ + +D RGFGF+TF E+ V D ++
Sbjct: 2015 KKIFVGGIPTTVTEVEFKEFFMQYGEVIEHQIMRDHSTNRSRGFGFITFDTEQAVDDLLA 2074
Query: 145 RRSH-EICGQQVAIDSATP 162
+ + E+ G QV I A P
Sbjct: 2075 KGNKLELAGGQVEIKKAEP 2093
>gi|326928651|ref|XP_003210489.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Meleagris gallopavo]
gi|449474690|ref|XP_004175898.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Taeniopygia
guttata]
gi|449474694|ref|XP_002196057.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Taeniopygia
guttata]
Length = 262
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 83 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKVLE 142
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 143 KKFHNVSGSKCEIKVAQPKE 162
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SRR 146
+FVG L + + +DL+ YF++FG + D + DP RGFGF+ F E ++V ++
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQK 60
Query: 147 SHEICGQQVAIDSATPL 163
H + G+ + A +
Sbjct: 61 EHRLDGRLIDPKKAMAM 77
>gi|224067168|ref|XP_002302389.1| predicted protein [Populus trichocarpa]
gi|222844115|gb|EEE81662.1| predicted protein [Populus trichocarpa]
Length = 172
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T E + YF +FGR +DV V +D RGFGFVTF E D+V
Sbjct: 93 KKIFVGGLASSLTEEQFKNYFEQFGRTVDVVVMQDSLTNRPRGFGFVTFDSEESVDKVLL 152
Query: 146 R-SHEICGQQVAIDSATPLD 164
SHE+ G++V + A P D
Sbjct: 153 IGSHELNGKRVEVKKAVPKD 172
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + +E + E LR YFS++G + KD RGFGFV F++ A R +
Sbjct: 4 KLFVGGISRETSEETLRNYFSKYGVVSHSLTAKDKITKFPRGFGFVVFSDPSSAARALQD 63
Query: 147 SHEICGQQVA 156
+H I G+ V
Sbjct: 64 NHVILGRTVT 73
>gi|410948034|ref|XP_003980746.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Felis
catus]
Length = 300
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 122 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKVLE 181
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H I G + I A P +
Sbjct: 182 KKFHTISGSKCEIKVAQPKE 201
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 39 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 98
Query: 146 RSHEICGQQVAIDSATPL 163
+ H + G+ + A +
Sbjct: 99 KEHRLDGRVIDPKKAMAM 116
>gi|357156001|ref|XP_003577309.1| PREDICTED: uncharacterized protein LOC100846541 [Brachypodium
distachyon]
Length = 463
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG L D R YF +FG I DV V D RGFGF+T+ +EE V +
Sbjct: 106 KKIFVGGLASTVNEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKALF 165
Query: 145 RRSHEICGQQVAIDSATPLD-DAGPSQ-------NFMMNAAETF 180
+ HE+ G+ V + A P + GPS N++MN A +F
Sbjct: 166 KTFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSF 209
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + + LR YF ++G +++ + +D RGFGF+ FA+ VA+RV
Sbjct: 7 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD Q + + + G GP RT G L
Sbjct: 67 KHMIDGRMVEAKKAVPRDD----QQALSKSGGSTHGSPGPSRTKKIFVGGL 113
>gi|27695334|gb|AAH43069.1| Hnrpab protein [Mus musculus]
Length = 311
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF +FG I + +P DPK RGF F+TF EE +V
Sbjct: 159 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 218
Query: 145 RRSHEICGQQVAIDSATP 162
++ H + G + I A P
Sbjct: 219 KKFHTVSGSKCEIKVAQP 236
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 136 KEHRLDGRVI 145
>gi|449267179|gb|EMC78145.1| Heterogeneous nuclear ribonucleoprotein A/B, partial [Columba
livia]
Length = 263
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 84 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKVLE 143
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 144 KKFHNVSGSKCEIKVAQPKE 163
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG + D + DP RGFGF+ F E ++V +
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 60
Query: 146 RSHEICGQQVAIDSATPL 163
+ H + G+ + A +
Sbjct: 61 KEHRLDGRLIDPKKAMAM 78
>gi|385454|gb|AAB26988.1| SqdA [Drosophila melanogaster]
Length = 321
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E+++ YF +FG I++V +P D +++ +GF F+TF +E+VV D +
Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPLDKQKSQRKGFCFITFDSEQVVTDLLKT 196
Query: 146 RSHEICGQQVAIDSATP 162
+I G++V + ATP
Sbjct: 197 PKQKIAGKEVDVKRATP 213
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVG L E T ++LR +F ++G I + V DP+ RGF F+ F D+VS
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 146 RSHEICG 152
I
Sbjct: 116 ADEHIIN 122
>gi|224064856|ref|XP_002301585.1| predicted protein [Populus trichocarpa]
gi|222843311|gb|EEE80858.1| predicted protein [Populus trichocarpa]
Length = 479
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T D R+YF +FG I DV V D RGFGF+T+ E D+V
Sbjct: 107 KKIFVGGLASTVTESDFRKYFDQFGLITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLM 166
Query: 146 RS-HEICGQQVAIDSATPLD-DAGPSQ 170
++ HE+ G+ V + A P + GPS+
Sbjct: 167 KTFHELNGKMVEVKRAVPKELSPGPSR 193
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E L+ YF FG +++ + KD RGFGFV F++ +A+RV +
Sbjct: 7 KLFIGGISWDTNEERLKDYFQSFGEVVEAVIMKDRTTGRARGFGFVVFSDPSIAERVIKE 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMM-NAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD QN + N+ + G GP RT G L
Sbjct: 67 KHSIDGRMVEAKKAVPRDD----QNMLSRNSGGSIHGSPGPGRTKKIFVGGL 114
>gi|140971918|ref|NP_112620.2| heterogeneous nuclear ribonucleoprotein A/B [Rattus norvegicus]
gi|392351173|ref|XP_003750864.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform
1 [Rattus norvegicus]
gi|6911221|gb|AAF31437.1|AF216753_1 CArG-binding factor A [Rattus norvegicus]
gi|6562847|emb|CAB62554.1| heterogeneous nuclear ribonucleoprotein [Rattus norvegicus]
gi|44890256|gb|AAH66664.1| Hnrpab protein [Rattus norvegicus]
gi|149052497|gb|EDM04314.1| rCG34663, isoform CRA_b [Rattus norvegicus]
Length = 285
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF +FG I + +P DPK RGF F+TF EE +V
Sbjct: 159 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 218
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 219 KKFHTVSGSKCEIKVAQPKE 238
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 136 KEHRLDGRVI 145
>gi|388329666|gb|AFK29221.1| musashi-PA [Drosophila buzzatii]
Length = 671
Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG + Q+ +AE+++ YFS+FG + + + D + HRGFGFVTF E V DRV
Sbjct: 309 KKIFVGGVSQDTSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 368
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFM 173
H I ++V A P + P+ +
Sbjct: 369 IHFHTIKNKKVECKKAQPKEAVTPAAQLL 397
Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + ++E L+ YF+ FG + DV + KDP RGFGF+TF E D+V +
Sbjct: 222 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 281
Query: 147 S-HEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 282 PIHTLDGKKIDPKHATP 298
>gi|326506828|dbj|BAJ91455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 351
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP T E+ R+YF FG + DV V D RGFGF+TF E DRV
Sbjct: 16 KKIFVGGLPSSLTDEEFRQYFQTFGAVTDVVVMYDQTTQRPRGFGFITFDSEDAVDRVLH 75
Query: 146 RS-HEICGQQVAIDSATPLD 164
++ H++ G+ V + A P +
Sbjct: 76 KTFHDLGGKMVEVKRALPRE 95
>gi|346467163|gb|AEO33426.1| hypothetical protein [Amblyomma maculatum]
Length = 287
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KK+FVG L T ED++ YF +FGRI D + D + HRGFGFVTF E V D+V
Sbjct: 140 KKVFVGGLSAPTTLEDVKNYFQQFGRIEDAMLMFDKQTNRHRGFGFVTFENEDVVDKVCE 199
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQ 170
HEI + V A P + P+
Sbjct: 200 IHFHEINNKMVECKKAQPKEVMMPNN 225
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
Query: 62 LGAPTLY----DHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV 117
L APT+ P + E++ GK +F+G L + E LR YFS+FG I +V V
Sbjct: 24 LCAPTMIMENDSQPTNPASPTEAAHDPGK-MFIGGLSWQTAPEGLREYFSKFGDITEVMV 82
Query: 118 PKDPKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQVAIDSATP 162
KDP RGFGFVTF++ D+V + HE+ G+++ A P
Sbjct: 83 MKDPSTRRSRGFGFVTFSDPASVDKVLANGPHELDGKKIDPKIAFP 128
>gi|195390397|ref|XP_002053855.1| GJ23113 [Drosophila virilis]
gi|194151941|gb|EDW67375.1| GJ23113 [Drosophila virilis]
Length = 343
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E+++ YFS+FG I++V +P D +++ +GF F+TF +E+VV D +
Sbjct: 138 KIFVGGLTTEISDEEIKTYFSQFGNIVEVEMPFDKQKSHRKGFCFITFDSEQVVTDLLKT 197
Query: 146 RSHEICGQQVAIDSATP 162
+I G++V + ATP
Sbjct: 198 PKQKISGKEVDVKRATP 214
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVG L E T ++LR +F +FG I + V DP+ RGF F+ F ++VS
Sbjct: 57 RKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEQVSA 116
Query: 146 RSHEICG 152
I
Sbjct: 117 AEEHIIN 123
>gi|145362676|ref|NP_974899.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332008157|gb|AED95540.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 371
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T + ++YF++FG I DV V D + RGFGF+++ E D+V +
Sbjct: 46 KKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQ 105
Query: 146 RS-HEICGQQVAIDSATPLDDAGPSQNFMMNAAETFG 181
++ HE+ G+ V + A P D A + MN +FG
Sbjct: 106 KTFHELNGKMVEVKLAVPKDMALNTMRNQMN-VNSFG 141
>gi|296084992|emb|CBI28407.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + + L+ YFS +G +++ + KD RGFGFV FA+ VA+RV +
Sbjct: 7 KLFIGGISWDTNEDRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVFADPAVAERVIKE 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD Q+ + + + G GP RT G L
Sbjct: 67 KHNIDGRMVEAKKAVPKDD----QSILSRNSGSIHGSPGPGRTRKIFVGGL 113
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+KIFVG L T D ++YF +FG I DV V D RGFGF+T+ E D+V
Sbjct: 106 RKIFVGGLASTVTESDFKKYFDQFGAITDVVVMYDHNTQRPRGFGFITYESEEAVDKVLL 165
Query: 146 RS-HEICGQQVAIDSATP 162
++ HE+ G+ V + A P
Sbjct: 166 KTFHELNGKMVEVKRAVP 183
>gi|158296251|ref|XP_001688945.1| AGAP006656-PB [Anopheles gambiae str. PEST]
gi|157016421|gb|EDO63951.1| AGAP006656-PB [Anopheles gambiae str. PEST]
Length = 327
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 60/121 (49%), Gaps = 17/121 (14%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG I D + D + HRGFGFVTF E V D+V
Sbjct: 75 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 134
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGY 204
HEI + V A P + P+ N A+T RT GR G+ DF W
Sbjct: 135 IHFHEINNKMVECKKAQPKEVMLPA-----NLAKT--------RTAGR--GTYDF-MWSL 178
Query: 205 G 205
G
Sbjct: 179 G 179
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 102 LRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQVAIDSA 160
LR YFS+FG I +V V KDP RGFGF+TF + D+V + +HE+ G+++ A
Sbjct: 2 LRDYFSKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAHGTHELDGKKIDPKVA 61
Query: 161 TP 162
P
Sbjct: 62 FP 63
>gi|26345118|dbj|BAC36208.1| unnamed protein product [Mus musculus]
Length = 285
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF +FG I + +P DPK RGF F+TF EE +V
Sbjct: 159 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 218
Query: 145 RRSHEICGQQVAIDSATP 162
++ H + G + I A P
Sbjct: 219 KKFHTVSGSKCEIKVAQP 236
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 136 KEHRLDGRVI 145
>gi|195036936|ref|XP_001989924.1| GH19060 [Drosophila grimshawi]
gi|193894120|gb|EDV92986.1| GH19060 [Drosophila grimshawi]
Length = 349
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E+++ YFS+FG I++V +P D +++ +GF F+TF +E+VV D +
Sbjct: 140 KIFVGGLTTEISDEEIKTYFSQFGTIVEVEMPFDKQKSHRKGFCFITFDSEQVVTDLLKT 199
Query: 146 RSHEICGQQVAIDSATP 162
+I G++V + ATP
Sbjct: 200 PKQKIAGKEVDVKRATP 216
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVG L E T ++LR +F ++G I + V DP+ RGF F+ F D+VS
Sbjct: 59 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDQVSA 118
Query: 146 RSHEICGQQ 154
I +
Sbjct: 119 AEEHIINSK 127
>gi|195113435|ref|XP_002001273.1| GI10695 [Drosophila mojavensis]
gi|193917867|gb|EDW16734.1| GI10695 [Drosophila mojavensis]
Length = 342
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E+++ YFS+FG I++V +P D +++ +GF F+TF +E+VV D +
Sbjct: 138 KIFVGGLTTEISDEEIKTYFSQFGNIVEVEMPFDKQKSHRKGFCFITFDSEQVVTDLLKT 197
Query: 146 RSHEICGQQVAIDSATP 162
+I G++V + ATP
Sbjct: 198 PKQKISGKEVDVKRATP 214
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVG L E T ++LR +F +FG I + V DP+ RGF F+ F D+VS
Sbjct: 57 RKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDQVSA 116
Query: 146 RSHEICGQQ 154
I +
Sbjct: 117 AEEHIINSK 125
>gi|405960878|gb|EKC26752.1| TAR DNA-binding protein 43 [Crassostrea gigas]
Length = 420
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 84 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+ +K+F+ R ++ TA+DL +YFS+FG + DV++PK R F FVTF + +A +
Sbjct: 210 MNRKVFIARCSEDITADDLHKYFSKFGEVSDVFIPKP-----FRAFAFVTFMDAEIAQSL 264
Query: 144 SRRSHEICGQQVAIDSATP 162
H I G V + SATP
Sbjct: 265 CGEDHIIKGTSVHVSSATP 283
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 78 GESSQRIGKK----IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVT 133
G ++R+ KK + V LP ++T ED+R+YFS+FG +L V V +D K +GFGFV
Sbjct: 114 GSKTRRMDKKRCVDLIVLGLPWKSTEEDMRKYFSQFGELLLVQVKRDGKTGQSKGFGFVR 173
Query: 134 FAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQN 171
F + + + H I G+ ++ + +GP N
Sbjct: 174 FGDFEAQSKCLAQRHMIDGRWCEVNIPASNEQSGPPMN 211
>gi|357495375|ref|XP_003617976.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Medicago truncatula]
gi|355519311|gb|AET00935.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Medicago truncatula]
Length = 479
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E LR YFS +G + + + KD RGFGFV F + VAD V +
Sbjct: 7 KLFIGGISWDTNEERLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVFIDPAVADIVVQE 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD QN + + + G GP RT G L
Sbjct: 67 KHNIDGRMVEAKKAVPRDD----QNVLSRTSGSIHGSPGPGRTRKIFVGGL 113
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+KIFVG L T D ++YF +FG I DV V D RGFGF+T+ E D+V
Sbjct: 106 RKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLL 165
Query: 146 RS-HEICGQQVAIDSATP 162
++ HE+ G+ V + A P
Sbjct: 166 KTFHELNGKMVEVKRAVP 183
>gi|14388456|dbj|BAB60767.1| hypothetical protein [Macaca fascicularis]
Length = 183
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 52 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 111
Query: 145 RRSHEICGQQVAIDSATP 162
++ H I G + I A P
Sbjct: 112 KKFHTISGSKCEIKVAQP 129
>gi|125600879|gb|EAZ40455.1| hypothetical protein OsJ_24907 [Oryza sativa Japonica Group]
Length = 427
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 73/151 (48%), Gaps = 32/151 (21%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+KIFVG L T + RRYF +FG I DV V D RGFGF+T+ E D+
Sbjct: 63 RKIFVGGLASNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALH 122
Query: 146 RS-HEICGQQVAIDSATPLDDA-GPS-------QNFMMNAAETF-------------GGY 183
++ HE+ G+ V + A P + + GP+ QN+ M+ +F GGY
Sbjct: 123 KNFHELNGKMVEVKRAVPKEQSPGPAARSPAGGQNYAMSRVHSFLNGFNQGYNPNPIGGY 182
Query: 184 GGPMRTYGRMYGSLD-----FDDW--GYGMG 207
G MR GR YG L F + GYGMG
Sbjct: 183 G--MRVDGR-YGLLTGARNGFSSFGPGYGMG 210
>gi|225447606|ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246008 [Vitis vinifera]
Length = 478
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + + L+ YFS +G +++ + KD RGFGFV FA+ VA+RV +
Sbjct: 7 KLFIGGISWDTNEDRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVFADPAVAERVIKE 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD Q+ + + + G GP RT G L
Sbjct: 67 KHNIDGRMVEAKKAVPKDD----QSILSRNSGSIHGSPGPGRTRKIFVGGL 113
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+KIFVG L T D ++YF +FG I DV V D RGFGF+T+ E D+V
Sbjct: 106 RKIFVGGLASTVTESDFKKYFDQFGAITDVVVMYDHNTQRPRGFGFITYESEEAVDKVLL 165
Query: 146 RS-HEICGQQVAIDSATP 162
++ HE+ G+ V + A P
Sbjct: 166 KTFHELNGKMVEVKRAVP 183
>gi|405960558|gb|EKC26474.1| RNA-binding protein Musashi-like protein Rbp6 [Crassostrea gigas]
Length = 281
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YFS++G+I D + D HRGFGFVTF E V D+V
Sbjct: 114 KKIFVGGLSAATTVEDVKNYFSQYGKIEDAMLMFDKTTNRHRGFGFVTFENEDVVDKVCE 173
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 174 IHFHEINKKMVECKKAQPKEVMLPT 198
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
K+F+G L + T E L+ +F RFG I + V KDP RGFGFVT+ + D
Sbjct: 26 KMFIGGLSWQTTVESLKDHFGRFGEIKEAMVMKDPTTKRSRGFGFVTYKDPASVD 80
>gi|397467431|ref|XP_003805422.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pan
paniscus]
Length = 261
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 83 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 142
Query: 145 RRSHEICGQQVAIDSATP 162
++ H + G + I A P
Sbjct: 143 KKFHTVSGSKCEIKVAQP 160
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SRR 146
+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V ++
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 147 SHEICGQQVAIDSATPL 163
H + G+ + A +
Sbjct: 61 EHRLDGRVIDPKKAMAM 77
>gi|302121706|gb|ADK92872.1| hnRNP [Hypericum perforatum]
Length = 477
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + + E L+ YF FG +++ + KD RGFGF+ FA+ VADRV +
Sbjct: 7 KLFVGGISWDTNEERLKEYFGSFGDVVEAVIMKDRTTGRARGFGFIVFADPSVADRVIKE 66
Query: 147 SHEICGQQVAIDSATPLDDAG-PSQN 171
H I G+ V A P DD PS+N
Sbjct: 67 KHNIDGRMVEAKRAIPRDDQNIPSRN 92
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+KIFVG L T D + YF +FG I+D V D RGFGF+T+ + D+V
Sbjct: 107 RKIFVGGLASTVTESDFKNYFDQFGIIIDAVVMYDHNTQRPRGFGFITYDSDEAVDKVLT 166
Query: 146 RS-HEICGQQVAIDSATP 162
++ HE+ G+ V + A P
Sbjct: 167 KTFHELNGKMVEVKRAVP 184
>gi|147903976|ref|NP_001087778.1| MGC84815 protein [Xenopus laevis]
gi|51703946|gb|AAH81212.1| MGC84815 protein [Xenopus laevis]
Length = 291
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KK+FVG L + + LR Y+S++G I DV V KDP+ RGFGFVTF E D+ +
Sbjct: 13 KKLFVGGLNPKTNEDSLRAYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEASSVDKAQA 72
Query: 145 RRSHEICGQQVAIDSATPLDDAGP 168
R H++ G+ V A P ++ P
Sbjct: 73 DRPHKVDGKDVDSKRAMPREETSP 96
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS- 144
KKIFVG L ++ T EDL YF +FG + D + RGF FVTF + D+V
Sbjct: 103 KKIFVGGLKKDVTNEDLAEYFGKFGNVTDASIVVAKDTNTSRGFAFVTFDDTDSVDKVIL 162
Query: 145 RRSHEICGQQVAIDSA 160
R H I G + + A
Sbjct: 163 ARPHMIGGHKADVRKA 178
>gi|270011960|gb|EFA08408.1| hypothetical protein TcasGA2_TC006055 [Tribolium castaneum]
Length = 479
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q++ K+F+GR +E TA+DLR YF ++G + DV++PK R F FVTF + VA
Sbjct: 190 QQVPCKVFIGRCTEELTADDLREYFGKYGEVTDVFIPKP-----FRAFSFVTFLDPEVAQ 244
Query: 142 RVSRRSHEICGQQVAIDSATP 162
+ H I G V + +A P
Sbjct: 245 SLCGEDHIIKGVSVHVSNAAP 265
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E+ R I +G LP + T ++LR YF FG +L V KDPK +GFGF+ FA
Sbjct: 100 RMETKLRCTDLIVLG-LPWKTTEQNLREYFETFGEVLMAQVKKDPKTGQSKGFGFIRFAS 158
Query: 137 EVVADRVSRRSHEICGQQVAI 157
RV + H I G+ +
Sbjct: 159 YESQMRVLAQRHMIDGRWCDV 179
>gi|158296255|ref|XP_001688946.1| AGAP006656-PA [Anopheles gambiae str. PEST]
gi|157016423|gb|EDO63952.1| AGAP006656-PA [Anopheles gambiae str. PEST]
Length = 237
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 60/121 (49%), Gaps = 17/121 (14%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG I D + D + HRGFGFVTF E V D+V
Sbjct: 75 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 134
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGY 204
HEI + V A P + P+ N A+T RT GR G+ DF W
Sbjct: 135 IHFHEINNKMVECKKAQPKEVMLPA-----NLAKT--------RTAGR--GTYDF-MWSL 178
Query: 205 G 205
G
Sbjct: 179 G 179
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 102 LRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQVAIDSA 160
LR YFS+FG I +V V KDP RGFGF+TF + D+V + +HE+ G+++ A
Sbjct: 2 LRDYFSKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAHGTHELDGKKIDPKVA 61
Query: 161 TP 162
P
Sbjct: 62 FP 63
>gi|12851175|dbj|BAB28963.1| unnamed protein product [Mus musculus]
gi|148701715|gb|EDL33662.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Mus
musculus]
Length = 276
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF +FG I + +P DPK RGF F+TF EE +V
Sbjct: 159 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 218
Query: 145 RRSHEICGQQVAIDSATP 162
++ H + G + I A P
Sbjct: 219 KKFHTVSGSKCEIKVAQP 236
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 136 KEHRLDGRVI 145
>gi|403290028|ref|XP_003936135.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Saimiri
boliviensis boliviensis]
Length = 260
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 83 KKIFVGGLNPEATEEKIREYFGDFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 142
Query: 145 RRSHEICGQQVAIDSATP 162
++ H I G + I A P
Sbjct: 143 KKFHTISGSKCEIKVAQP 160
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SRR 146
+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V ++
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 147 SHEICGQQVAIDSATPL 163
H + G+ + A +
Sbjct: 61 EHRLDGRVIDPKKAMAM 77
>gi|6754222|ref|NP_034578.1| heterogeneous nuclear ribonucleoprotein A/B isoform 2 [Mus
musculus]
gi|729000|sp|Q99020.1|ROAA_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A/B;
Short=hnRNP A/B; AltName: Full=CArG-binding factor-A;
Short=CBF-A
gi|220363|dbj|BAA14181.1| CArG-binding factor-A [Mus musculus]
gi|840648|gb|AAA92146.1| CArG box-binding factor [Mus musculus]
gi|12850708|dbj|BAB28821.1| unnamed protein product [Mus musculus]
gi|89275692|gb|ABD66225.1| S1 protein D2 [Mus musculus]
gi|148701716|gb|EDL33663.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_c [Mus
musculus]
Length = 285
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF +FG I + +P DPK RGF F+TF EE +V
Sbjct: 159 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 218
Query: 145 RRSHEICGQQVAIDSATP 162
++ H + G + I A P
Sbjct: 219 KKFHTVSGSKCEIKVAQP 236
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 136 KEHRLDGRVI 145
>gi|147791134|emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera]
Length = 464
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP + E R+YF FG + DV V D RGFGFV+F E DRV
Sbjct: 110 KKIFVGGLPPTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLY 169
Query: 146 RS-HEICGQQVAIDSATPLD 164
++ H++ G+QV + A P D
Sbjct: 170 KTFHDLNGKQVEVKRALPKD 189
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + E + + L+ YF +G + V +D RGFGFV FA+ + DRV +
Sbjct: 7 KLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQ---NFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A ++ S NF N+A GG GG ++T G L
Sbjct: 67 KHIIDGRTVEAKRALSREEQQTSSRAGNF--NSARNSGG-GGNVKTKKIFVGGL 117
>gi|328783809|ref|XP_392590.4| PREDICTED: TAR DNA-binding protein 43-like [Apis mellifera]
gi|340729558|ref|XP_003403067.1| PREDICTED: TAR DNA-binding protein 43-like [Bombus terrestris]
gi|350411720|ref|XP_003489432.1| PREDICTED: TAR DNA-binding protein 43-like isoform 1 [Bombus
impatiens]
gi|350411723|ref|XP_003489433.1| PREDICTED: TAR DNA-binding protein 43-like isoform 2 [Bombus
impatiens]
gi|380018789|ref|XP_003693304.1| PREDICTED: TAR DNA-binding protein 43-like [Apis florea]
gi|383859208|ref|XP_003705088.1| PREDICTED: TAR DNA-binding protein 43-like [Megachile rotundata]
Length = 467
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q++ K+FVGR ++ TA+DLR YFS++G + DV++PK R F FVTF + VA
Sbjct: 188 QQVPCKVFVGRCTEDLTADDLRDYFSKYGEVTDVFIPKP-----FRAFSFVTFLDPEVAQ 242
Query: 142 RVSRRSHEICGQQVAIDSATP 162
+ H I G V + +A P
Sbjct: 243 SLCGEDHIIKGVSVHVSNAAP 263
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E+ R I +G LP + T ++LR YF FG +L V KD K +GFGF+ F
Sbjct: 98 RMETKLRCTDLIVLG-LPWKTTEQNLREYFETFGEVLMAQVKKDAKSGQSKGFGFIRFGS 156
Query: 137 EVVADRVSRRSHEICGQQVAI 157
R + H I G+ +
Sbjct: 157 YESQLRCLAQRHMIDGRWCDV 177
>gi|194752716|ref|XP_001958665.1| GF12452 [Drosophila ananassae]
gi|190619963|gb|EDV35487.1| GF12452 [Drosophila ananassae]
Length = 529
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
++ K+FVGR ++ ++DLR YFS+FG + DV++P+ R F FVTF + VA
Sbjct: 188 HQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRP-----FRAFSFVTFLDPDVAQ 242
Query: 142 RVSRRSHEICGQQVAIDSATPLDDAG---PSQNFMMNAAETFG 181
+ H I G V + +A P + +QN+ N+ +FG
Sbjct: 243 SLCGEDHIIKGVSVHVSNAAPKAEQNRNSQAQNYNYNSGNSFG 285
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E+ R I +G LP + + + LR YF +G +L + KD K +GFGFV F
Sbjct: 99 RIETRLRCTDLIVLG-LPWKTSEDSLREYFESYGEVLMAQIKKDNKSGQSKGFGFVRFGS 157
Query: 137 EVVADRVSRRSHEICGQ--QVAIDSATPLDDAGPSQNFMMNAAE 178
RV H I G+ +V + ++ + P + F+ E
Sbjct: 158 YDAQMRVLSNRHLIDGRWCEVKVPNSKGMGHQVPCKVFVGRCTE 201
>gi|161084522|ref|NP_001097632.1| RNA-binding protein 6, isoform C [Drosophila melanogaster]
gi|158028570|gb|ABW08560.1| RNA-binding protein 6, isoform C [Drosophila melanogaster]
Length = 257
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG I D + D + HRGFGFVTF E V D+V
Sbjct: 6 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 65
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGY 204
HEI + V A P + P+ N A+T R G +D+ +
Sbjct: 66 IHFHEINNKMVECKKAQPKEVMLPA-----NLAKT------------RAAGRSAYDNIMW 108
Query: 205 GMGS 208
G+G+
Sbjct: 109 GLGT 112
>gi|324511674|gb|ADY44854.1| RNA-binding protein Musashi Rbp6 [Ascaris suum]
Length = 345
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KK+F+G L +T ED+R YF ++G++ D + D HRGFGF+TF + V+D+V
Sbjct: 133 KKVFIGGLSATSTLEDMRNYFEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDDVSDKVCE 192
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYG 184
HEI G+ V A P + P Q AA YG
Sbjct: 193 IHFHEINGKMVECKKAQPKEVMLPVQLNKSRAAAARNLYG 232
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + TAE LR YF +FG + + V +DP RGFGF+TFA+ ++V +
Sbjct: 45 KMFIGGLSWQTTAEGLRDYFGKFGEVNECMVMRDPATKRARGFGFITFADPASVEKVLAH 104
Query: 146 RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETF-GGYGGP-----MRTYGRMYGSLD 198
HE+ G+++ A P A P ++ + F GG MR Y YG ++
Sbjct: 105 DQHELDGKKIDPKVAFP-KRAQP--KMIIKTKKVFIGGLSATSTLEDMRNYFEQYGKVE 160
>gi|195573919|ref|XP_002104939.1| msi [Drosophila simulans]
gi|194200866|gb|EDX14442.1| msi [Drosophila simulans]
Length = 459
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG + Q+ +AE+++ YFS+FG + + + D + HRGFGFVTF E V DRV
Sbjct: 116 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 175
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFM 173
H I ++V A P + P+ +
Sbjct: 176 IHFHTIKNKKVECKKAQPKEAVTPAAQLL 204
>gi|146197870|dbj|BAF57645.1| hnRNP A2/B1 protein [Dugesia japonica]
Length = 386
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 81 SQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVA 140
+Q KKIFVG LP + T D+R+YFS++G + DV +D RGFGFV F E
Sbjct: 13 TQNKFKKIFVGGLPPQTTESDMRQYFSKYGDVCDVVAMRDKTGNKSRGFGFVVFKEAESV 72
Query: 141 DRV-SRRSHEICGQQVAIDSATPLDDA 166
DR + R H++ G+ V A P +++
Sbjct: 73 DRCQAERPHQLLGKIVDTKRAMPKEES 99
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
K+IF+G + + T +DL+ YFS FG I+D + +D RGF F+TF + + D+V
Sbjct: 108 SKRIFIGGIRRFFTEDDLKDYFSTFGEIVDCTIKRDNVSGLSRGFAFITFTDRDIVDKV 166
>gi|18422817|ref|NP_568685.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|30695248|ref|NP_851149.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|17528972|gb|AAL38696.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|23297042|gb|AAN13229.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332008155|gb|AED95538.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332008156|gb|AED95539.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 431
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T + ++YF++FG I DV V D + RGFGF+++ E D+V +
Sbjct: 106 KKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQ 165
Query: 146 RS-HEICGQQVAIDSATPLDDAGPSQNFMMNAAETFG 181
++ HE+ G+ V + A P D A + MN +FG
Sbjct: 166 KTFHELNGKMVEVKLAVPKDMALNTMRNQMN-VNSFG 201
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + E + + LR YF FG +L+ + KD RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLL 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 KHIIDGKIVEAKKAVPRDD 85
>gi|225433229|ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257917 [Vitis vinifera]
Length = 464
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP + E R+YF FG + DV V D RGFGFV+F E DRV
Sbjct: 110 KKIFVGGLPPTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLY 169
Query: 146 RS-HEICGQQVAIDSATPLD 164
++ H++ G+QV + A P D
Sbjct: 170 KTFHDLNGKQVEVKRALPKD 189
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + E + + L+ YF +G + V +D RGFGFV FA+ + DRV +
Sbjct: 7 KLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQ---NFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A ++ S NF N+A GG GG ++T G L
Sbjct: 67 KHIIDGRTVEAKRALSREEQQTSSRAGNF--NSARNSGG-GGNVKTKKIFVGGL 117
>gi|156554677|ref|XP_001600539.1| PREDICTED: RNA-binding protein squid-like [Nasonia vitripennis]
Length = 338
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG L E + +D++ +FS+FG I+DV +P D + +GF F+TF E VA+ + +
Sbjct: 137 KIFVGGLSTELSDDDIKTFFSQFGTIVDVEMPFDKTKNQRKGFCFITFESEQVANELLKT 196
Query: 147 SHE-ICGQQVAIDSATP 162
S + I G++V + ATP
Sbjct: 197 SKQTISGKEVEVKKATP 213
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
+K+FVG L E T ++LR +FS FG I + V DP RGF F+ FA+ D+ ++
Sbjct: 56 RKLFVGGLSWETTDKELRDHFSTFGDIESINVKTDPTTGRSRGFAFIVFAKAESLDKAMA 115
Query: 145 RRSHEICGQQV 155
H I ++V
Sbjct: 116 HGDHIINNKKV 126
>gi|449447311|ref|XP_004141412.1| PREDICTED: uncharacterized protein LOC101211898 [Cucumis sativus]
Length = 238
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 79 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEV 138
+ Q G+KIFVG L E T E+ R YF FG+I DV V D RGFGFVTF
Sbjct: 9 NNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLE 68
Query: 139 VADRVSRRS-HEICGQQVAIDSATP 162
D V +R+ HE+ G++V + A P
Sbjct: 69 SVDSVLQRNFHELNGRRVEVKRAIP 93
>gi|145347002|ref|XP_001417969.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578197|gb|ABO96262.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 218
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV- 143
G KIFVG L + +R +FS+FG +++V V +DP RGFGF+TF + A +V
Sbjct: 12 GSKIFVGGLDRTVDEGVVRNFFSQFGPVMEVLVMRDPHNHQSRGFGFITFQRDDSAKQVL 71
Query: 144 SRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGP 186
R H++ G++V + SA P A P Q +++ + GYG P
Sbjct: 72 QNRYHDMLGKRVEVKSAVPRGQAPPPQRGPPRSSQGY-GYGQP 113
>gi|307940738|gb|ADN95983.1| G-strand specific single-stranded telomere-binding protein 1
[Nicotiana tabacum]
Length = 346
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 5/142 (3%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G ES KKIFVG +P ++ + +FS++G+++D + +D RGFGF+ F
Sbjct: 93 GSAESKDFKTKKIFVGGIPTSMNEDEFKGFFSKYGKVVDCEIIRDHVSKRSRGFGFIVFD 152
Query: 136 EEVVADRVSRRSHEI--CGQQVAIDSATPLDDAGPSQNFMMNAAETFG-GYGGPMRTYGR 192
E+V D V + I G QV I A P + P+ + +E+ G GY +G
Sbjct: 153 NELVVDNVLSEGNMIDMLGTQVEIKKAEPKKPSNPASSGHGYGSESRGRGYSDSYGGFGN 212
Query: 193 MYGSLDFDDWGYGMGSGRPSRG 214
Y S F G+G S R S G
Sbjct: 213 SYSS--FGSGGFGPASYRSSGG 232
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L +E T E +YF ++G I+D + KD RGFGF+T+++ V D V
Sbjct: 16 KIFIGGLAKETTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYSDPTVVDTVIAE 75
Query: 147 SHEICGQQVAIDSATPLDDA 166
+H I +QV I P A
Sbjct: 76 THIINDKQVEIKRTIPKGSA 95
>gi|449688875|ref|XP_002157235.2| PREDICTED: TAR DNA-binding protein 43-like, partial [Hydra
magnipapillata]
Length = 271
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
+ + ++R+ K+F+GRLP + + +DLR+YFS +G + DVY+P T RGFGFVT+A+
Sbjct: 104 KKKENKRV--KLFIGRLPADTSEDDLRKYFSDYGELTDVYLP-----TPFRGFGFVTYAQ 156
Query: 137 EVVADRVSRRSHEICGQQVAIDSATP 162
A V +SH + G ++ + A P
Sbjct: 157 ADDAQIVLHKSHSLKGSRMNVTIAEP 182
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+ V LP +AT +DL+ YF +FG + + DP RGF F+ F E A +V +
Sbjct: 31 LIVLGLPYKATNQDLKDYFLKFGELAMYEIKIDPLTKESRGFAFIRFKNEAAAQKVLKVD 90
Query: 148 HEICGQQVAI 157
H I G++ +
Sbjct: 91 HSILGRRCEV 100
>gi|9758790|dbj|BAB09088.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 404
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T + ++YF++FG I DV V D + RGFGF+++ E D+V +
Sbjct: 106 KKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQ 165
Query: 146 RS-HEICGQQVAIDSATPLDDAGPSQNFMMNAAETFG 181
++ HE+ G+ V + A P D A + MN +FG
Sbjct: 166 KTFHELNGKMVEVKLAVPKDMALNTMRNQMN-VNSFG 201
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + E + + LR YF FG +L+ + KD RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLL 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 KHIIDGKIVEAKKAVPRDD 85
>gi|21553963|gb|AAM63044.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 431
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T + ++YF++FG I DV V D + RGFGF+++ E D+V +
Sbjct: 106 KKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQ 165
Query: 146 RS-HEICGQQVAIDSATPLDDAGPSQNFMMNAAETFG 181
++ HE+ G+ V + A P D A + MN +FG
Sbjct: 166 KTFHELNGKMVEVKLAVPKDMALNTMRNQMN-VNSFG 201
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + E + + LR YF FG +L+ + KD RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLL 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 KHIIDGKIVEAKKAVPRDD 85
>gi|386771322|ref|NP_001246812.1| RNA-binding protein 6, isoform E [Drosophila melanogaster]
gi|383291983|gb|AFH04483.1| RNA-binding protein 6, isoform E [Drosophila melanogaster]
Length = 259
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG I D + D + HRGFGFVTF E V D+V
Sbjct: 6 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 65
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGY 204
HEI + V A P + P+ N A+T R G +D+ +
Sbjct: 66 IHFHEINNKMVECKKAQPKEVMLPA-----NLAKT------------RAAGRSAYDNIMW 108
Query: 205 GMGS 208
G+G+
Sbjct: 109 GLGT 112
>gi|385455|gb|AAB26989.1| SqdB [Drosophila melanogaster]
Length = 308
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E+++ YF +FG I++V +P D +++ +GF F+TF +E+VV D +
Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPLDKQKSQRKGFCFITFDSEQVVTDLLKT 196
Query: 146 RSHEICGQQVAIDSATP 162
+I G++V + ATP
Sbjct: 197 PKQKIAGKEVDVKRATP 213
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVG L E T ++LR +F ++G I + V DP+ RGF F+ F D+VS
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 146 RSHEICGQQ 154
I +
Sbjct: 116 ADEHIINSK 124
>gi|222101818|gb|ACM44033.1| hnRNPA/B-like 28 [Bombyx mori]
Length = 256
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G LP T DLR +F R+G++++V + D +R RGFGF++F +E+ +RV++
Sbjct: 104 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQERKKSRGFGFLSFEDEISVERVTQE 163
Query: 147 SH-EICGQQVAIDSATPLD 164
+ G+QV I A P D
Sbjct: 164 HFINLNGKQVEIKRAEPRD 182
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E + E+L+RYFSR+G ++D V K+ + RGFGFVTFA+ + + V +
Sbjct: 14 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 73
Query: 147 S-HEICGQQVAIDSATPLDDAGPSQ----------NFMMNAAET-----FGGYGGPM--- 187
H++ G+ + P P + N ET FG YG M
Sbjct: 74 GPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVV 133
Query: 188 ------RTYGRMYGSLDFDD 201
R R +G L F+D
Sbjct: 134 IMYDQERKKSRGFGFLSFED 153
>gi|357628443|gb|EHJ77777.1| hypothetical protein KGM_04418 [Danaus plexippus]
Length = 414
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G LP T DLR +F R+G++++V + D ++ RGFGF++F +E+ +RV++
Sbjct: 104 KVFLGGLPSNITETDLRVFFGRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEISVERVTQE 163
Query: 147 SH-EICGQQVAIDSATPLD 164
+ G+QV I A P D
Sbjct: 164 HFINLNGKQVEIKRAEPRD 182
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E + E+L+RYFSR+G ++D V K+ + RGFGFVTFAE + + V +
Sbjct: 14 KLFVGGLSWETSQENLQRYFSRYGDVIDCVVMKNSESGRSRGFGFVTFAEPSLVNVVLQN 73
Query: 147 -SHEICGQQVAIDSATP 162
H++ G+ + P
Sbjct: 74 GPHQLDGRTIDPKPCNP 90
>gi|195382465|ref|XP_002049950.1| GJ21868 [Drosophila virilis]
gi|194144747|gb|EDW61143.1| GJ21868 [Drosophila virilis]
Length = 539
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
++ K+FVGR ++ ++DLR YFS+FG + DV++P+ R F FVTF + VA
Sbjct: 188 HQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRP-----FRAFSFVTFLDPDVAQ 242
Query: 142 RVSRRSHEICGQQVAIDSATPLDDAGPS---QNFMMNAAETFG 181
+ H I G V + +A P + + QN+ N+ FG
Sbjct: 243 SLCGEDHIIKGVSVHVSNAAPKAEQNRTHQGQNYNYNSGNNFG 285
Score = 43.5 bits (101), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E+ R I +G L + T + LR YF +G +L + KD K +GFGFV F
Sbjct: 99 RIETRLRCTDLIVLG-LAWKTTEDSLREYFEGYGEVLMAQIKKDVKSGQSKGFGFVRFGS 157
Query: 137 EVVADRVSRRSHEICGQQVAI 157
RV H I G+ +
Sbjct: 158 YEAQMRVLSNRHLIDGRWCEV 178
>gi|391332405|ref|XP_003740625.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like
[Metaseiulus occidentalis]
Length = 259
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KK+FVG L T ED++ YF +FGRI D + D + HRGFGFVTF E V D+V
Sbjct: 111 KKVFVGGLSAPTTLEDVKNYFQQFGRIEDAMLMFDKQTNRHRGFGFVTFELEDVVDKVCE 170
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 171 VHFHEINNKMVECKKAQPKEVMMPN 195
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + E LR YFS+FG I +V V KDP RGFGFVTFA+ ++V +
Sbjct: 23 KMFIGGLSWQTAPEGLREYFSKFGEISEVMVMKDPTTRRSRGFGFVTFADPASVEKVLAN 82
Query: 146 RSHEICGQQVAIDSATP 162
HE+ G+++ A P
Sbjct: 83 GPHELDGKKIDPKIAFP 99
>gi|334188244|ref|NP_001190485.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332008158|gb|AED95541.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 453
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T + ++YF++FG I DV V D + RGFGF+++ E D+V +
Sbjct: 128 KKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQ 187
Query: 146 RS-HEICGQQVAIDSATPLDDAGPSQNFMMNAAETFG 181
++ HE+ G+ V + A P D A + MN +FG
Sbjct: 188 KTFHELNGKMVEVKLAVPKDMALNTMRNQMN-VNSFG 223
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + E + + LR YF FG +L+ + KD RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLL 66
Query: 147 SHEICGQQVAIDS 159
H I G ++ +DS
Sbjct: 67 KHIIDG-KILVDS 78
>gi|326527725|dbj|BAK08137.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528387|dbj|BAJ93382.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 453
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP T E+ R+YF FG + DV V D RGFGF+TF E DRV
Sbjct: 118 KKIFVGGLPSSLTDEEFRQYFQTFGAVTDVVVMYDQTTQRPRGFGFITFDSEDAVDRVLH 177
Query: 146 RS-HEICGQQVAIDSATP 162
++ H++ G+ V + A P
Sbjct: 178 KTFHDLGGKMVEVKRALP 195
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADRVSR 145
K+F+G + E T E L+ +FS FG + V +D K TG RGFGFV +A+ D +
Sbjct: 7 KLFIGGISWETTEEKLQEHFSNFGEVSQAAVMRD-KLTGRPRGFGFVVYADPASVDAALQ 65
Query: 146 RSHEICGQQVAIDSA 160
H + G+ V + A
Sbjct: 66 EPHTLDGRTVDVKRA 80
>gi|222623166|gb|EEE57298.1| hypothetical protein OsJ_07373 [Oryza sativa Japonica Group]
Length = 459
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G LP++ T + YF ++G I+D + KD RGFGF+TFA+ V DRV
Sbjct: 16 KIFIGGLPKDTTMGTFKEYFGKYGEIVDAVIMKDRFTQKPRGFGFITFADPAVVDRVIED 75
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNF 172
+H I G++V I P A P ++F
Sbjct: 76 NHVINGKEVEIKRTIP-KGAAPLKDF 100
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG LP ++ + +FS+FG++++ + +D RGFGFV F AE+ V + ++
Sbjct: 103 KKIFVGGLPSALKEDEFKEFFSKFGKVVEHEIIRDHSTNRSRGFGFVVFDAEKTVDELLA 162
Query: 145 RRSHEI 150
++ + I
Sbjct: 163 KKGNMI 168
>gi|24646609|ref|NP_731826.1| squid, isoform A [Drosophila melanogaster]
gi|11038|emb|CAA44503.1| hrp40.1 [Drosophila melanogaster]
gi|21428420|gb|AAM49870.1| LD09691p [Drosophila melanogaster]
gi|23171185|gb|AAF54964.2| squid, isoform A [Drosophila melanogaster]
gi|220943526|gb|ACL84306.1| sqd-PA [synthetic construct]
gi|220953540|gb|ACL89313.1| sqd-PA [synthetic construct]
Length = 321
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E+++ YF +FG I++V +P D +++ +GF F+TF +E+VV D +
Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 196
Query: 146 RSHEICGQQVAIDSATP 162
+I G++V + ATP
Sbjct: 197 PKQKIAGKEVDVKRATP 213
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVG L E T ++LR +F ++G I + V DP+ RGF F+ F D+VS
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 146 RSHEICG 152
I
Sbjct: 116 ADEHIIN 122
>gi|91087839|ref|XP_967837.1| PREDICTED: similar to TBPH CG10327-PA [Tribolium castaneum]
Length = 450
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q++ K+F+GR +E TA+DLR YF ++G + DV++PK R F FVTF + VA
Sbjct: 190 QQVPCKVFIGRCTEELTADDLREYFGKYGEVTDVFIPKP-----FRAFSFVTFLDPEVAQ 244
Query: 142 RVSRRSHEICGQQVAIDSATP 162
+ H I G V + +A P
Sbjct: 245 SLCGEDHIIKGVSVHVSNAAP 265
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 54/120 (45%), Gaps = 13/120 (10%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E+ R I +G LP + T ++LR YF FG +L V KDPK +GFGF+ FA
Sbjct: 100 RMETKLRCTDLIVLG-LPWKTTEQNLREYFETFGEVLMAQVKKDPKTGQSKGFGFIRFAS 158
Query: 137 EVVADRVSRRSHEICGQQVAI---DSATPLDDAGPSQNFMMNAAET---------FGGYG 184
RV + H I G+ + +S L P + F+ E FG YG
Sbjct: 159 YESQMRVLAQRHMIDGRWCDVKVPNSKEGLIQQVPCKVFIGRCTEELTADDLREYFGKYG 218
>gi|410899384|ref|XP_003963177.1| PREDICTED: TAR DNA-binding protein 43-like isoform 3 [Takifugu
rubripes]
Length = 310
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 16/111 (14%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ TAE+LR+YF ++G + DV++PK R F FVTFA+ VA
Sbjct: 204 RKVFVGRCTEDMTAEELRQYFMQYGEVTDVFIPK-----PFRAFAFVTFADHQVA----- 253
Query: 146 RSHEICGQQVAIDSATP-LDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 195
+CG+ + I + + +A P N N + F + G M T M+
Sbjct: 254 --QALCGEDLIIKGVSVHISNAEPKHN---NIHQAFPNFPGGMATLAAMFN 299
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 3/116 (2%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q+ I +G LP + T +DL+ YFS FG ++ V V +D K +GFGFV F +
Sbjct: 118 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVIMVQVKRDLKTGNSKGFGFVRFTDYETQI 176
Query: 142 RVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
+V + H I G+ D P A P + T +R Y YG +
Sbjct: 177 KVIAQRHLIDGRWC--DCKLPNSKACPDDRKVFVGRCTEDMTAEELRQYFMQYGEV 230
>gi|383857431|ref|XP_003704208.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
[Megachile rotundata]
Length = 443
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VSR 145
K+F+G LP T DLR +F+R+G++++V + D ++ RGFGF++F +E DR V+
Sbjct: 104 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
Query: 146 RSHEICGQQVAIDSATPLDDA 166
+ G+QV I A P D +
Sbjct: 164 HFVNLNGKQVEIKRAEPRDSS 184
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E T E+L+RYF R+G ++D V K+ + RGFGFVTF++ V +
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 147 S-HEICGQQVAIDSATPLDDAGP 168
H++ G+ + P P
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKP 96
>gi|351704017|gb|EHB06936.1| Heterogeneous nuclear ribonucleoprotein A/B, partial
[Heterocephalus glaber]
Length = 261
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 84 KKIFVGGLNPEATEEKIREYFGDFGEIEAIELPMDPKLNKRRGFVFITFKEEDPVKKVLE 143
Query: 145 RRSHEICGQQVAIDSATP 162
++ H I G + I A P
Sbjct: 144 KKFHTISGSKCEIKVAQP 161
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 146 RSHEICGQQVAIDSATPL 163
+ H + G+ + A +
Sbjct: 61 KEHRLDGRVIDPKKAMAM 78
>gi|345494041|ref|XP_001606007.2| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Nasonia
vitripennis]
Length = 367
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG I D + D + HRGFGFVTF E V D+V
Sbjct: 111 KKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 170
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRM 193
HEI + V A P + P+ N A G Y M + G +
Sbjct: 171 IHFHEINNKMVECKKAQPKEVMLPA-NLAKTRAAGRGAYDNFMWSLGAL 218
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + + E LR YF+++G I +V V KDP RGFGF+TFA+ D+V ++
Sbjct: 23 KMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKVLAQ 82
Query: 146 RSHEICGQQVAIDSATP 162
+HE+ G+++ A P
Sbjct: 83 GTHELDGKKIDPKVAFP 99
>gi|194885691|ref|XP_001976478.1| GG19989 [Drosophila erecta]
gi|190659665|gb|EDV56878.1| GG19989 [Drosophila erecta]
Length = 533
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
++ K+FVGR ++ ++DLR YFS+FG + DV++P+ R F FVTF + VA
Sbjct: 188 HQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRP-----FRAFSFVTFLDPDVAQ 242
Query: 142 RVSRRSHEICGQQVAIDSATPLDDAG---PSQNFMMNAAETFG 181
+ H I G V + +A P + +Q++ N+A +FG
Sbjct: 243 SLCGEDHIIKGVSVHVSNAAPKAEQNRNQQAQSYNYNSANSFG 285
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E+ R I +G LP + T E LR YF +G +L + KD K +GFGFV F
Sbjct: 99 RIETRLRCTDLIVLG-LPWKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGFGFVRFGS 157
Query: 137 EVVADRVSRRSHEICGQQVAI 157
RV H I G+ +
Sbjct: 158 YDAQMRVLSNRHLIDGRWCEV 178
>gi|328724864|ref|XP_001951157.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Acyrthosiphon pisum]
Length = 442
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VSR 145
K+F+G LP T DLR +FSR+G++++V + D ++ RGFGF++F ++ DR V+
Sbjct: 104 KVFLGGLPSNVTETDLRTFFSRYGKVMEVVIMYDQEKKKSRGFGFLSFEDDDAVDRCVAE 163
Query: 146 RSHEICGQQVAIDSATPLD 164
+ G+QV I A P D
Sbjct: 164 HFVNLSGKQVEIKKAEPRD 182
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E E L+RYF+R+G ++D V K+ + RGFGFVTFA+ + V +
Sbjct: 14 KLFVGGLSWETQQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVVLQN 73
Query: 147 -SHEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 74 GPHVLDGRTIDPKPCNP 90
>gi|294460252|gb|ADE75708.1| unknown [Picea sitchensis]
Length = 396
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T +D R+YF +FG I DV V D HRGFGF+T+ E D+V +
Sbjct: 101 KKIFVGGLAPTVTEDDFRKYFEQFGNITDVVVMYDHTTQRHRGFGFITYDSEDAVDKVLQ 160
Query: 146 RS-HEICGQQVAIDSATPLD 164
++ H++ + V + A P D
Sbjct: 161 QTFHQLKEKTVEVKRAIPKD 180
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G + + + + L+ YF +G+++DV + KD RGFGFV F + VADRV +
Sbjct: 7 KIFIGGISWDTSEDRLKDYFGNYGQVVDVVIMKDRTTGRARGFGFVVFGDPSVADRVIQE 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V P D+
Sbjct: 67 KHTIDGRAVEAKRVVPRDE 85
>gi|195489341|ref|XP_002092695.1| GE11522 [Drosophila yakuba]
gi|194178796|gb|EDW92407.1| GE11522 [Drosophila yakuba]
Length = 534
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
++ K+FVGR ++ ++DLR YFS+FG + DV++P+ R F FVTF + VA
Sbjct: 188 HQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRP-----FRAFSFVTFLDPDVAQ 242
Query: 142 RVSRRSHEICGQQVAIDSATPLDDAG---PSQNFMMNAAETFG 181
+ H I G V + +A P + +Q++ N+A +FG
Sbjct: 243 SLCGEDHIIKGVSVHVSNAAPKAEQNRNQQAQSYNYNSANSFG 285
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E+ R I +G LP + T E LR YF +G +L + KD K +GFGFV F
Sbjct: 99 RIETRLRCTDLIVLG-LPWKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGFGFVRFGS 157
Query: 137 EVVADRVSRRSHEICGQQVAI 157
RV H I G+ +
Sbjct: 158 YDAQMRVLSNRHLIDGRWCEV 178
>gi|414590674|tpg|DAA41245.1| TPA: hypothetical protein ZEAMMB73_495774 [Zea mays]
Length = 470
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 99/240 (41%), Gaps = 61/240 (25%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E + ++ H + G V +A P++D A+ +++G
Sbjct: 56 DSGIAERVTMEKHMIDGRMVEAKKAVPRDDQ------------------SIASKNNSSIG 97
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+P G G + +KIFVG L T + RRYF +FG I DV V D
Sbjct: 98 SP----------GPGRT-----RKIFVGGLASNVTEVEFRRYFEQFGVITDVVVMYDHNT 142
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDDA-GP-------SQNFMM 174
RGFGF+T+ E D+ ++ HE+ G+ V + A P + + GP QN+ M
Sbjct: 143 QRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPKEQSPGPIARSPAGGQNYAM 202
Query: 175 NAAETF-------------GGYGGPMRT---YGRMYGSLD-FDDWGYGMGSGRPSRGDWR 217
+ F GGYG MR YG + G+ + F +G G G G G R
Sbjct: 203 SRVHNFLNGFNQGYNPNPLGGYG--MRVDARYGLLAGARNGFSSFGPGYGMGMSVEGGMR 260
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + E + LR YF RFG + + + +D RGFGFV FA+ +A+RV+
Sbjct: 7 KLFVGGISWETDEDRLREYFGRFGDVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTME 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 KHMIDGRMVEAKKAVPRDD 85
>gi|393912245|gb|EJD76653.1| musashi [Loa loa]
Length = 336
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 73 SFYGRGESSQRIG-KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGF 131
+F + +S I KK+F+G L +T ED++ YF ++G++ D + D HRGFGF
Sbjct: 105 AFPKKAQSKMIIKTKKVFIGGLSATSTLEDMKNYFEQYGKVEDAMLMFDKTTQRHRGFGF 164
Query: 132 VTFAEEVVADRVSR-RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYG-GP 186
+TF + V+D+V HEI G+ V A P + P Q AA YG GP
Sbjct: 165 ITFDNDDVSDKVCEIHFHEINGKMVECKKAQPKEVMLPVQLNKSRAAAARSLYGLGP 221
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 78 GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEE 137
G SS GK +F+G L + TAE LR YF +FG + + V +DP RGFGF+TF +
Sbjct: 23 GTSSNDPGK-MFIGGLSWQTTAEGLRDYFGKFGEVNECMVMRDPATKRARGFGFITFTDP 81
Query: 138 VVADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGP-----MRTYG 191
D+V ++ HE+ G++ ID S+ + GG M+ Y
Sbjct: 82 ASVDKVLAQELHELDGKK--IDPKVAFPKKAQSKMIIKTKKVFIGGLSATSTLEDMKNYF 139
Query: 192 RMYGSLD 198
YG ++
Sbjct: 140 EQYGKVE 146
>gi|195122786|ref|XP_002005892.1| GI20724 [Drosophila mojavensis]
gi|193910960|gb|EDW09827.1| GI20724 [Drosophila mojavensis]
Length = 536
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
++ K+FVGR ++ ++DLR YFS+FG + DV++P+ R F FVTF + VA
Sbjct: 188 HQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRP-----FRAFSFVTFLDPDVAQ 242
Query: 142 RVSRRSHEICGQQVAIDSATPLDDAGPS---QNFMMNAAETFG 181
+ H I G V + +A P + + QN+ N+ FG
Sbjct: 243 SLCGEDHIIKGVSVHVSNAAPKAEQNRTHQGQNYNYNSGNNFG 285
Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E+ R I +G L + T + LR YF +G +L + KD K +GFGFV F
Sbjct: 99 RIETRLRCTDLIVLG-LAWKTTEDSLREYFESYGEVLMAQIKKDVKSGQSKGFGFVRFGS 157
Query: 137 EVVADRVSRRSHEICGQQVAI 157
RV H I G+ +
Sbjct: 158 YEAQMRVLANRHLIDGRWCEV 178
>gi|297804878|ref|XP_002870323.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
gi|297316159|gb|EFH46582.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
Length = 407
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP T E+ R+YF +G + DV + D RGFGFV+F E DRV
Sbjct: 110 KKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDRVLH 169
Query: 146 RS-HEICGQQVAIDSATPLD 164
++ H++ G+QV + A P D
Sbjct: 170 KTFHDLSGKQVEVKRALPKD 189
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADRVSR 145
K+FVG + E + LR +FS +G + V +D K TG RGFGFV F++ V DRV +
Sbjct: 7 KLFVGGVSWETDEDKLREHFSNYGEVSQAIVMRD-KLTGRPRGFGFVIFSDPSVLDRVLQ 65
Query: 146 RSHEICGQQVAIDSA 160
H I ++V + A
Sbjct: 66 DKHNIDTREVDVKRA 80
>gi|189210886|ref|XP_001941774.1| heterogeneous nuclear ribonucleoprotein D0 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187977867|gb|EDU44493.1| heterogeneous nuclear ribonucleoprotein D0 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 442
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADRVSR 145
KIFVG + QEAT ED +F +FGR++D + D K TG RGFGFVTF + D R
Sbjct: 70 KIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMD-KETGRPRGFGFVTFDGDAAVDATLR 128
Query: 146 RSHEICGQQVAIDSATP 162
+I G+Q+ + A P
Sbjct: 129 EPLQILGKQIEVKRAQP 145
>gi|410899382|ref|XP_003963176.1| PREDICTED: TAR DNA-binding protein 43-like isoform 2 [Takifugu
rubripes]
Length = 294
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 16/111 (14%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ TAE+LR+YF ++G + DV++PK R F FVTFA+ VA
Sbjct: 188 RKVFVGRCTEDMTAEELRQYFMQYGEVTDVFIPK-----PFRAFAFVTFADHQVA----- 237
Query: 146 RSHEICGQQVAIDSATP-LDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 195
+CG+ + I + + +A P N N + F + G M T M+
Sbjct: 238 --QALCGEDLIIKGVSVHISNAEPKHN---NIHQAFPNFPGGMATLAAMFN 283
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 3/116 (2%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q+ I +G LP + T +DL+ YFS FG ++ V V +D K +GFGFV F +
Sbjct: 102 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVIMVQVKRDLKTGNSKGFGFVRFTDYETQI 160
Query: 142 RVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
+V + H I G+ D P A P + T +R Y YG +
Sbjct: 161 KVIAQRHLIDGRWC--DCKLPNSKACPDDRKVFVGRCTEDMTAEELRQYFMQYGEV 214
>gi|380014686|ref|XP_003691353.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Apis
florea]
Length = 410
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG I D + D + HRGFGFVTF E V D+V
Sbjct: 111 KKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 170
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGY 183
HEI + V A P + P+ N A G Y
Sbjct: 171 IHFHEINNKMVECKKAQPKEVMLPA-NLAKTRAANRGAY 208
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + + E LR YF+++G I +V V KDP RGFGF+TFA+ D+V ++
Sbjct: 23 KMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKVLAQ 82
Query: 146 RSHEICGQQVAIDSATP 162
+HE+ G+++ A P
Sbjct: 83 GNHELDGKKIDPKVAFP 99
>gi|255582445|ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223528341|gb|EEF30383.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 484
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E L+ YF FG +++ + KD RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWDTNEERLKEYFGSFGEVVEAVIMKDRTTGRARGFGFVVFADAAVAERVIME 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMM-NAAETFGGYGGPMRT 189
H I G+ V A P DD QN + + + G GP RT
Sbjct: 67 KHNIDGRMVEAKKAVPRDD----QNILNRSTGSSIHGSPGPGRT 106
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 33/169 (19%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E ++++ H + G V +A P++D ++ +T + G
Sbjct: 56 DAAVAERVIMEKHNIDGRMVEAKKAVPRDDQ----------------NILNRSTGSSIHG 99
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+P G G + +KIFVG L T D R+YF ++G I DV V D
Sbjct: 100 SP----------GPGRT-----RKIFVGGLASTVTETDFRKYFEQYGTITDVVVMYDHNT 144
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD-DAGPSQ 170
RGFGF+T+ E D+V ++ HE+ G+ V + A P + GPS+
Sbjct: 145 QRPRGFGFITYDSEEAVDKVLMKTFHELNGKMVEVKRAVPKELSPGPSR 193
>gi|428175617|gb|EKX44506.1| hypothetical protein GUITHDRAFT_72201, partial [Guillardia theta
CCMP2712]
Length = 164
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G LP E T DL+ YF RFG + DV V KD RGFGFVTF + VA++V
Sbjct: 1 KIFIGGLPTETTDFDLKNYFVRFGVLADVVVMKDKLTGNGRGFGFVTFEDPEVAEKVVAA 60
Query: 147 SHEICGQQVAIDSATPLDDA-GPSQN 171
H I G+ V A P +A GP +
Sbjct: 61 RHTIRGRSVEAKLAIPRGEAPGPRSD 86
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R + S R+ KIFVG L + D + YFSR+G+I+D + D RGFGF+TF
Sbjct: 84 RSDPSDRV-TKIFVGGLASTVSEADFKNYFSRWGKIMDAQIMVDHNTKRSRGFGFITFES 142
Query: 137 -EVVADRVSRRSHEI 150
+ V D + R+HEI
Sbjct: 143 YKSVEDVIRIRNHEI 157
>gi|4378711|gb|AAD19638.1| nucleic acid binding factor pRM10 [Rattus norvegicus]
Length = 298
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF +FG I + +P DPK RGF F+TF EE +V
Sbjct: 172 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 231
Query: 145 RRSHEICGQQVAIDSATP 162
++ H + G + I A P
Sbjct: 232 KKFHTVSGSKCEIKVAQP 249
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 89 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 148
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 149 KEHRLDGRVI 158
>gi|328724866|ref|XP_003248272.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Acyrthosiphon pisum]
Length = 432
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VSR 145
K+F+G LP T DLR +FSR+G++++V + D ++ RGFGF++F ++ DR V+
Sbjct: 104 KVFLGGLPSNVTETDLRTFFSRYGKVMEVVIMYDQEKKKSRGFGFLSFEDDDAVDRCVAE 163
Query: 146 RSHEICGQQVAIDSATPLD 164
+ G+QV I A P D
Sbjct: 164 HFVNLSGKQVEIKKAEPRD 182
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E E L+RYF+R+G ++D V K+ + RGFGFVTFA+ + V +
Sbjct: 14 KLFVGGLSWETQQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVVLQN 73
Query: 147 -SHEICGQQVAIDSATP 162
H + G+ + P
Sbjct: 74 GPHVLDGRTIDPKPCNP 90
>gi|297790889|ref|XP_002863329.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309164|gb|EFH39588.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 431
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + E + + LR YF FG +L+ + KD RGFGFV FA+ +VA+RV
Sbjct: 7 KLFIGGISWETSEDRLREYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPIVAERVVLL 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 KHIIDGKIVEAKKAVPRDD 85
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T + ++YF++FG I DV V D + RGFGF+++ E D+V +
Sbjct: 106 KKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEDAVDKVLQ 165
Query: 146 RS-HEICGQQVAIDSATPLDDAGPSQNFMMNAAETFG 181
++ HE+ G+ V + A P + A + MN +FG
Sbjct: 166 KTFHELNGKMVEVKLAVPKEMALNTMRNQMN-VNSFG 201
>gi|357603649|gb|EHJ63861.1| hypothetical protein KGM_07603 [Danaus plexippus]
Length = 411
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVGR ++ TA DLR YFS+FG + DV++PK R F F+TF + VA + +
Sbjct: 192 KVFVGRCTEDLTANDLREYFSQFGEVTDVFIPKP-----FRAFSFITFLDPEVAQSLCGQ 246
Query: 147 SHEICGQQVAIDSATP 162
H I G V + +A+P
Sbjct: 247 DHIIKGVSVNVSNASP 262
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
+ + + + + V LP +AT + +R YF +FG +L + +DPK +GF F+ F+
Sbjct: 96 KSKRNDNLCSDLIVLGLPWKATEQTVREYFEKFGEVLMAQLKRDPKTGMSKGFAFIRFSS 155
Query: 137 EVVADRVSRRSHEICG 152
RV + H I G
Sbjct: 156 YTSQMRVLAQRHMIDG 171
>gi|270002456|gb|EEZ98903.1| hypothetical protein TcasGA2_TC004519 [Tribolium castaneum]
Length = 358
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG + Q+ +A++++ YFS+FG++ + + D + HRGFGFVTF E V DRV
Sbjct: 129 KKIFVGGVSQDTSADEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 188
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFM 173
H I ++V A P + S +
Sbjct: 189 IHFHTIKNKKVECKKAQPKEAVQASAQLL 217
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + ++E LR YF FG + DV + KDP RGFGF+TF+E D V +
Sbjct: 42 KLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPSSVDNVLKV 101
Query: 147 S-HEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 102 PIHTLDGKKIDPKHATP 118
>gi|297604415|ref|NP_001055379.2| Os05g0376000 [Oryza sativa Japonica Group]
gi|255676318|dbj|BAF17293.2| Os05g0376000 [Oryza sativa Japonica Group]
Length = 345
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
Query: 3 KDQDSVENLMV--DTHELGGSTVVVDRATPKEDDFR-PVGRMSHGGYGAYNAYISAATRY 59
K++ V L++ + ELG A K++D R P R+ GGYGAYNAYI+AATRY
Sbjct: 177 KEEQPVLLLLLAESSTELGKGWNKRCLAYRKDEDVRHPPRRVVQGGYGAYNAYITAATRY 236
Query: 60 AALGAPTLYDHPGSFYGR---GESSQRIGKKIFV 90
AALG PT YDHPG YG S + +G+++ V
Sbjct: 237 AALGTPTSYDHPGPAYGNRVAQRSHEILGQEVAV 270
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 55/84 (65%), Gaps = 6/84 (7%)
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYG--GPMRTYGRMYGSLD 198
+RV++RSHEI GQ+VA+D+A PL+ G S + AE +G YG G + YGR GSL
Sbjct: 254 NRVAQRSHEILGQEVAVDTAEPLE--GGSGGGYLEPAEAYGPYGAYGSLLPYGRFSGSLG 311
Query: 199 FDDWGYG-MGSGRPSRGDWRYRPY 221
+ D+GYG G+ SR + RYRP+
Sbjct: 312 Y-DYGYGPSGNSSRSRPESRYRPF 334
>gi|350398654|ref|XP_003485263.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Bombus
impatiens]
Length = 410
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG I D + D + HRGFGFVTF E V D+V
Sbjct: 111 KKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 170
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGY 183
HEI + V A P + P+ N A G Y
Sbjct: 171 IHFHEINNKMVECKKAQPKEVMLPA-NLAKTRAANRGAY 208
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + + E LR YF+++G I +V V KDP RGFGF+TFA+ D+V ++
Sbjct: 23 KMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKVLAQ 82
Query: 146 RSHEICGQQVAIDSATP 162
+HE+ G+++ A P
Sbjct: 83 GNHELDGKKIDPKVAFP 99
>gi|189234173|ref|XP_968418.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein
[Tribolium castaneum]
Length = 373
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG + Q+ +A++++ YFS+FG++ + + D + HRGFGFVTF E V DRV
Sbjct: 144 KKIFVGGVSQDTSADEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 203
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFM 173
H I ++V A P + S +
Sbjct: 204 IHFHTIKNKKVECKKAQPKEAVQASAQLL 232
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + ++E LR YF FG + DV + KDP RGFGF+TF+E D V +
Sbjct: 57 KLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPSSVDNVLKV 116
Query: 147 S-HEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 117 PIHTLDGKKIDPKHATP 133
>gi|343172818|gb|AEL99112.1| ribonucleoprotein, partial [Silene latifolia]
Length = 319
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP T E R+YF FG + DV + D RGFGF++F E DRV +
Sbjct: 35 KKIFVGGLPPSLTDEGFRQYFEGFGHVTDVVIMFDQNTQRPRGFGFISFDSEDAVDRVLQ 94
Query: 146 RS-HEICGQQVAIDSATPLD 164
+ H++ G+QV + A P D
Sbjct: 95 STFHDLDGKQVEVKRALPKD 114
>gi|414883904|tpg|DAA59918.1| TPA: hypothetical protein ZEAMMB73_017923 [Zea mays]
Length = 415
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + E + + LR YF RFG + + + +D RGFGFV F + VA+RV+
Sbjct: 16 KLFVGGISWETSEDRLREYFGRFGEVTEAAIMRDRSTGRARGFGFVVFTDAAVAERVTME 75
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 76 KHMIDGRMVEAKKAVPRDD 94
Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 22/38 (57%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
+KIFVG LP T D RRYF +FG I DV PK
Sbjct: 115 RKIFVGGLPSSITEADFRRYFEQFGVITDVVKKAVPKE 152
>gi|383851133|ref|XP_003701094.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Megachile
rotundata]
Length = 338
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + ED++ +FS+FG I+DV +P D + +GF F+TF +E+VV + +
Sbjct: 135 KIFVGGLSTELSDEDIKNFFSQFGTIVDVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 194
Query: 146 RSHEICGQQVAIDSATP 162
I G++V + ATP
Sbjct: 195 PKQTINGKEVDVKKATP 211
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
+K+FVG L E T ++LR +F +G I + V DP RGF F+ FA+ D++ S
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMS 113
Query: 145 RRSHEICGQQV 155
H I G++V
Sbjct: 114 ANDHIINGKKV 124
>gi|189241054|ref|XP_968171.2| PREDICTED: similar to CG32169 CG32169-PA [Tribolium castaneum]
Length = 525
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG I D + D + HRGFGFVTF E V D+V
Sbjct: 211 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 270
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRM 193
HEI + V A P + P+ N A G Y M + G +
Sbjct: 271 IHFHEINNKMVECKKAQPKEVMLPA-NLAKTRAAGRGAYDNFMWSLGAL 318
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + + E LR YFS++G I +V V KDP RGFGF+TF + D+V ++
Sbjct: 123 KMFIGGLSWQTSPESLREYFSKYGDITEVMVMKDPATRRSRGFGFITFTDPASVDKVLAQ 182
Query: 146 RSHEICGQQVAIDSATP 162
+HE+ G+++ A P
Sbjct: 183 GTHELDGKKIDPKVAFP 199
>gi|16266931|dbj|BAB70469.1| Musashi1 [Homo sapiens]
Length = 179
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 43 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 102
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 103 IHFHEINNKMVECKKAQPKEVMSPT 127
>gi|343172816|gb|AEL99111.1| ribonucleoprotein, partial [Silene latifolia]
Length = 319
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP T E R+YF FG + DV + D RGFGF++F E DRV +
Sbjct: 35 KKIFVGGLPPSLTDEGFRQYFEGFGHVTDVVIMFDQNTQRPRGFGFISFDSEDAVDRVLQ 94
Query: 146 RS-HEICGQQVAIDSATPLD 164
+ H++ G+QV + A P D
Sbjct: 95 STFHDLDGKQVEVKRALPKD 114
>gi|195016128|ref|XP_001984346.1| GH15068 [Drosophila grimshawi]
gi|193897828|gb|EDV96694.1| GH15068 [Drosophila grimshawi]
Length = 379
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG I D + D + HRGFGFVTF E V D+V
Sbjct: 128 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 187
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGY 204
HEI + V A P + P+ N A+T R G +D+ +
Sbjct: 188 IHFHEINNKMVECKKAQPKEVMLPA-----NLAKT------------RAAGRSAYDNIMW 230
Query: 205 GMGS 208
G+G+
Sbjct: 231 GLGT 234
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + + E LR YF R+G I + V KDP RGFGFVTF++ D+V ++
Sbjct: 40 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 99
Query: 146 RSHEICGQQVAIDSATP 162
+HE+ G++V A P
Sbjct: 100 GTHELDGKKVDPKVAFP 116
>gi|62484464|ref|NP_730245.2| RNA-binding protein 6, isoform A [Drosophila melanogaster]
gi|194872120|ref|XP_001972967.1| GG15829 [Drosophila erecta]
gi|195328324|ref|XP_002030866.1| GM24349 [Drosophila sechellia]
gi|195494905|ref|XP_002095039.1| GE22169 [Drosophila yakuba]
gi|75027590|sp|Q9VVE5.3|MSIR6_DROME RecName: Full=RNA-binding protein Musashi homolog Rbp6
gi|21483526|gb|AAM52738.1| RE25373p [Drosophila melanogaster]
gi|61678495|gb|AAF49366.3| RNA-binding protein 6, isoform A [Drosophila melanogaster]
gi|190654750|gb|EDV51993.1| GG15829 [Drosophila erecta]
gi|194119809|gb|EDW41852.1| GM24349 [Drosophila sechellia]
gi|194181140|gb|EDW94751.1| GE22169 [Drosophila yakuba]
Length = 369
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG I D + D + HRGFGFVTF E V D+V
Sbjct: 118 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 177
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGY 204
HEI + V A P + P+ N A+T R G +D+ +
Sbjct: 178 IHFHEINNKMVECKKAQPKEVMLPA-----NLAKT------------RAAGRSAYDNIMW 220
Query: 205 GMGS 208
G+G+
Sbjct: 221 GLGT 224
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + + E LR YF R+G I + V KDP RGFGFVTF++ D+V ++
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
Query: 146 RSHEICGQQVAIDSATP 162
+HE+ G++V A P
Sbjct: 90 GTHELDGKKVDPKVAFP 106
>gi|356501721|ref|XP_003519672.1| PREDICTED: uncharacterized protein LOC100799330 [Glycine max]
Length = 475
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E LR YF +G +++ + KD RGFGFV F++ VA+ V +
Sbjct: 7 KLFIGGISWDTNEERLREYFCTYGEVVEAVIMKDRTTGRARGFGFVVFSDPAVAEIVIKE 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD QN + + + G GP RT G L
Sbjct: 67 KHNIDGRMVEAKKAVPRDD----QNILSRNSGSIHGSPGPGRTRKIFVGGL 113
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+KIFVG L T D ++YF +FG I DV V D RGFGF+T+ E D+V
Sbjct: 106 RKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLL 165
Query: 146 RS-HEICGQQVAIDSATPLD-DAGPSQ 170
++ HE+ G+ V + A P + GPS+
Sbjct: 166 KTFHELNGKMVEVKRAVPKELSPGPSR 192
>gi|296083709|emb|CBI23698.3| unnamed protein product [Vitis vinifera]
Length = 388
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP + E R+YF FG + DV V D RGFGFV+F E DRV
Sbjct: 110 KKIFVGGLPPTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLY 169
Query: 146 RS-HEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTY-GRM 193
++ H++ G+QV + A P DA P + + +G GG TY GRM
Sbjct: 170 KTFHDLNGKQVEVKRALP-KDANPGGG---SRYQGYGASGGNPTTYDGRM 215
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + E + + L+ YF +G + V +D RGFGFV FA+ + DRV +
Sbjct: 7 KLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQ---NFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A ++ S NF N+A GG GG ++T G L
Sbjct: 67 KHIIDGRTVEAKRALSREEQQTSSRAGNF--NSARNSGG-GGNVKTKKIFVGGL 117
>gi|195028318|ref|XP_001987023.1| GH20198 [Drosophila grimshawi]
gi|193903023|gb|EDW01890.1| GH20198 [Drosophila grimshawi]
Length = 545
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
++ K+FVGR ++ ++DLR YFS+FG + DV++P+ R F FVTF + VA
Sbjct: 188 HQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRP-----FRAFSFVTFLDPDVAQ 242
Query: 142 RVSRRSHEICGQQVAIDSATPLDDAGPS---QNFMMNAAETFG 181
+ H I G V + +A P + S QN+ N ++G
Sbjct: 243 SLCGEDHIIKGVSVHVSNAAPKAEQNRSHQAQNYSYNTGNSYG 285
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E+ R I +G L + T + LR YF +G +L + KD K +GFGFV F
Sbjct: 99 RIETRLRCTDLIVLG-LAWKTTEDSLREYFESYGEVLMAQIKKDVKSGQSKGFGFVRFGS 157
Query: 137 EVVADRVSRRSHEICGQQVAI 157
RV H I G+ +
Sbjct: 158 YEAQMRVLANRHLIDGRWCEV 178
>gi|321469931|gb|EFX80909.1| hypothetical protein DAPPUDRAFT_224415 [Daphnia pulex]
Length = 464
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+F+G LP T DLR +FS++G++ +V + D ++ RGFGF+TF E DR +
Sbjct: 114 GYKVFLGGLPSNLTETDLRNFFSQYGKVSEVVIMYDQEKKKSRGFGFLTFESEESVDRCT 173
Query: 145 RRSH-EICGQQVAIDSATPLD 164
+ I G+QV I A P D
Sbjct: 174 GEHYVSINGKQVEIKKAEPRD 194
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 78 GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
G++S GK +F+G L E T ++L RYFS++G ++D V K+P+ RGFGF+TFA+
Sbjct: 13 GDNSNEQGK-MFIGGLSWETTRDNLLRYFSQYGEVVDCVVMKNPETGRSRGFGFITFAD 70
>gi|386771324|ref|NP_001246813.1| RNA-binding protein 6, isoform F [Drosophila melanogaster]
gi|383291984|gb|AFH04484.1| RNA-binding protein 6, isoform F [Drosophila melanogaster]
Length = 225
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG I D + D + HRGFGFVTF E V D+V
Sbjct: 6 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 65
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGY 204
HEI + V A P + P+ N A+T R G +D+ +
Sbjct: 66 IHFHEINNKMVECKKAQPKEVMLPA-----NLAKT------------RAAGRSAYDNIMW 108
Query: 205 GMGS 208
G+G+
Sbjct: 109 GLGT 112
>gi|328783731|ref|XP_623522.3| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like isoform 2
[Apis mellifera]
Length = 486
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG I D + D + HRGFGFVTF E V D+V
Sbjct: 187 KKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 246
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGY 183
HEI + V A P + P+ N A G Y
Sbjct: 247 IHFHEINNKMVECKKAQPKEVMLPA-NLAKTRAANRGAY 284
>gi|159129147|gb|EDP54261.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
A1163]
Length = 608
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q KIFVG + QEAT ++ + +F++FGR++D + D K TG RGFGFVTF E
Sbjct: 185 QEKTSKIFVGGVSQEATEQEFKEFFTQFGRVIDATLMID-KDTGRPRGFGFVTFDSEAAV 243
Query: 141 DRVSRRSHEICGQQVAIDSATP 162
+ R ICG+ + + A P
Sbjct: 244 EAALSRPLAICGKPIEVKKAQP 265
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T + LR YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 106 KMFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK 165
Query: 147 SHEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 166 EHYLDGKIIDPKRAIPRDE 184
>gi|255574941|ref|XP_002528377.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223532245|gb|EEF34049.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 470
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP T ++ R+YF +G + DV + D RGFGF++F E DRV
Sbjct: 110 KKIFVGGLPPALTDDEFRQYFEAYGLVTDVVIMYDQNTQRPRGFGFISFDNEDAVDRVLH 169
Query: 146 RS-HEICGQQVAIDSATPLD 164
++ H++ G+QV + A P D
Sbjct: 170 KTFHDLNGKQVEVKRALPKD 189
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + E T + L+ YF ++G ++ V +D RGFGFV FA+ + DRV +
Sbjct: 7 KLFIGGISWETTEDKLKDYFVQYGDVVQTVVMRDKTTGRPRGFGFVVFADPNILDRVLQD 66
Query: 147 SHEICGQQVAIDSA 160
H I G+ V A
Sbjct: 67 KHTIDGRTVEAKKA 80
>gi|194901408|ref|XP_001980244.1| GG17035 [Drosophila erecta]
gi|190651947|gb|EDV49202.1| GG17035 [Drosophila erecta]
Length = 345
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E+++ YF +FG I++V +P D +++ +GF F+TF +E+VV D +
Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 196
Query: 146 RSHEICGQQVAIDSATP 162
+I G++V + ATP
Sbjct: 197 PKQKIAGKEVDVKRATP 213
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVG L E T ++LR +F ++G I + V DP+ RGF F+ F D+VS
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 146 RSHEICGQQ 154
I +
Sbjct: 116 ADEHIINSK 124
>gi|327265526|ref|XP_003217559.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Anolis
carolinensis]
Length = 367
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEE-VVADRVS 144
KKIFVG L EA E +R YF FG I + +P DPK RGF F+TF EE V +
Sbjct: 196 KKIFVGGLNPEAAEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKILE 255
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 256 KKFHNVSGSKCEIKVAQPKE 275
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG + D + DP RGFGF+ F E D+V +
Sbjct: 113 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEAASVDKVLEQ 172
Query: 146 RSHEICGQQV 155
+ H++ G+ +
Sbjct: 173 KEHKLDGRVI 182
>gi|330939341|ref|XP_003305832.1| hypothetical protein PTT_18782 [Pyrenophora teres f. teres 0-1]
gi|311316974|gb|EFQ86065.1| hypothetical protein PTT_18782 [Pyrenophora teres f. teres 0-1]
Length = 562
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADRVSR 145
KIFVG + QEAT ED +F +FGR++D + D K TG RGFGFVTF + D R
Sbjct: 190 KIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMD-KETGRPRGFGFVTFDGDAAVDATLR 248
Query: 146 RSHEICGQQVAIDSATP 162
+I G+Q+ + A P
Sbjct: 249 APLQILGKQIEVKRAQP 265
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T E L+ YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 106 KMFIGGLNWETTEESLKNYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVK 165
Query: 147 SHEICGQQVAIDSATPLDD 165
H + G+ + A P ++
Sbjct: 166 EHYLDGKIIDPKRAIPREE 184
>gi|115486383|ref|NP_001068335.1| Os11g0637700 [Oryza sativa Japonica Group]
gi|108864610|gb|ABA94921.2| RNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113645557|dbj|BAF28698.1| Os11g0637700 [Oryza sativa Japonica Group]
gi|215697828|dbj|BAG92021.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740693|dbj|BAG97349.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 467
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T D R+YF +FG I DV V D RGFGF+T+ E D+
Sbjct: 106 KKIFVGGLASTVTEADFRKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF 165
Query: 146 RS-HEICGQQVAIDSATPLD-DAGPSQ-------NFMMNAAETF 180
++ HE+ G+ V + A P + GPS N+ +N A F
Sbjct: 166 KTFHELNGKMVEVKRAVPKELSPGPSMRSPVGGFNYAVNRANNF 209
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + + LR YF ++G +++ + +D RGFGF+ FA+ VA+RV
Sbjct: 7 KLFIGGISWDTNEDRLREYFDKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD Q+ + + + G GP RT G L
Sbjct: 67 KHMIDGRMVEAKKAVPRDD----QHALSKSGGSAHGSPGPSRTKKIFVGGL 113
>gi|70989777|ref|XP_749738.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
gi|66847369|gb|EAL87700.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
Length = 608
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q KIFVG + QEAT ++ + +F++FGR++D + D K TG RGFGFVTF E
Sbjct: 185 QEKTSKIFVGGVSQEATEQEFKEFFTQFGRVIDATLMID-KDTGRPRGFGFVTFDSEAAV 243
Query: 141 DRVSRRSHEICGQQVAIDSATP 162
+ R ICG+ + + A P
Sbjct: 244 EAALSRPLAICGKPIEVKKAQP 265
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T + LR YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 106 KMFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK 165
Query: 147 SHEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 166 EHYLDGKIIDPKRAIPRDE 184
>gi|297805630|ref|XP_002870699.1| hypothetical protein ARALYDRAFT_493936 [Arabidopsis lyrata subsp.
lyrata]
gi|297316535|gb|EFH46958.1| hypothetical protein ARALYDRAFT_493936 [Arabidopsis lyrata subsp.
lyrata]
Length = 421
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG L +E T+ + ++F ++G I D + KD K RGFGFVT+A+ V D+V +
Sbjct: 43 KIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVIQD 102
Query: 147 SHEICGQQVAIDSATP 162
+H I G+QV I P
Sbjct: 103 NHIIIGKQVEIKRTIP 118
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG +P ++ + +F +FG + + + +D RGFGFVT+ E + D +
Sbjct: 130 KKIFVGGIPASVDDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLA 189
Query: 146 RSH--EICGQQVAIDSATP 162
+ + E+ G QV I A P
Sbjct: 190 KGNRIELSGTQVEIKKAEP 208
>gi|11040|emb|CAA44504.1| hrp40.2 [Drosophila melanogaster]
Length = 345
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E+++ YF +FG I++V +P D +++ +GF F+TF +E+VV D +
Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 196
Query: 146 RSHEICGQQVAIDSATP 162
+I G++V + ATP
Sbjct: 197 PKQKIAGKEVDVKRATP 213
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVG L E T ++LR +F ++G I + V DP+ RGF F+ F D+VS
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 146 RSHEICGQQ 154
I +
Sbjct: 116 ADEHIINSK 124
>gi|24646607|ref|NP_731825.1| squid, isoform B [Drosophila melanogaster]
gi|55584092|sp|Q08473.3|SQD_DROME RecName: Full=RNA-binding protein squid; AltName:
Full=Heterogeneous nuclear ribonucleoprotein 40;
Short=HNRNP 40
gi|23171184|gb|AAF54963.2| squid, isoform B [Drosophila melanogaster]
Length = 344
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E+++ YF +FG I++V +P D +++ +GF F+TF +E+VV D +
Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 196
Query: 146 RSHEICGQQVAIDSATP 162
+I G++V + ATP
Sbjct: 197 PKQKIAGKEVDVKRATP 213
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVG L E T ++LR +F ++G I + V DP+ RGF F+ F D+VS
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 146 RSHEICGQQ 154
I +
Sbjct: 116 ADEHIINSK 124
>gi|24646605|ref|NP_652209.1| squid, isoform C [Drosophila melanogaster]
gi|386765705|ref|NP_001247088.1| squid, isoform E [Drosophila melanogaster]
gi|23171183|gb|AAN13570.1| squid, isoform C [Drosophila melanogaster]
gi|73853364|gb|AAZ86753.1| LD29474p [Drosophila melanogaster]
gi|220951946|gb|ACL88516.1| sqd-PC [synthetic construct]
gi|383292688|gb|AFH06406.1| squid, isoform E [Drosophila melanogaster]
Length = 308
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E+++ YF +FG I++V +P D +++ +GF F+TF +E+VV D +
Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 196
Query: 146 RSHEICGQQVAIDSATP 162
+I G++V + ATP
Sbjct: 197 PKQKIAGKEVDVKRATP 213
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVG L E T ++LR +F ++G I + V DP+ RGF F+ F D+VS
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 146 RSHEICGQQ 154
I +
Sbjct: 116 ADEHIINSK 124
>gi|119480409|ref|XP_001260233.1| heterogeneous nuclear ribonucleoprotein HRP1 [Neosartorya fischeri
NRRL 181]
gi|119408387|gb|EAW18336.1| heterogeneous nuclear ribonucleoprotein HRP1 [Neosartorya fischeri
NRRL 181]
Length = 462
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q KIFVG + QEAT ++ + +F++FGR++D + D RGFGFVTF E +
Sbjct: 90 QEKTSKIFVGGVSQEATEQEFKEFFTQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVE 149
Query: 142 RVSRRSHEICGQQVAIDSATP 162
R ICG+ + + A P
Sbjct: 150 AALSRPLAICGKPIEVKKAQP 170
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+F+G L E T + L+ YFS+FG + + V +D RGFGF+TF + + V
Sbjct: 10 RKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMV 69
Query: 146 RSHEICGQQVAIDSATPLDD 165
+ H + G+ + A P D+
Sbjct: 70 KEHYLDGKIIDPKRAIPRDE 89
>gi|357146558|ref|XP_003574035.1| PREDICTED: uncharacterized protein LOC100832671 [Brachypodium
distachyon]
Length = 449
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 73/160 (45%), Gaps = 24/160 (15%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D +V+ +++ H L G TV V RA +E+ S A
Sbjct: 56 DPAAVDAALLEPHTLDGRTVDVKRALSREEQ-----------------QASKAVN----- 93
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
P+ + G G ++S KKIFVG LP T ++ R+YF FG + DV V D
Sbjct: 94 -PSTGRNTGGGGGGNDASGTRTKKIFVGGLPSSLTDDEFRQYFQTFGAVTDVVVMYDQTT 152
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP 162
RGFGF+TF E DRV ++ H++ G+ V + A P
Sbjct: 153 QRPRGFGFITFDSEDAVDRVLHKTFHDLGGKMVEVKRALP 192
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADRVSR 145
K+F+G + E T E L +FS FG + V +D K TG RGFGFV +A+ D
Sbjct: 7 KLFIGGISWETTEEKLHEHFSTFGEVSQAAVMRD-KLTGRPRGFGFVVYADPAAVDAALL 65
Query: 146 RSHEICGQQVAIDSA 160
H + G+ V + A
Sbjct: 66 EPHTLDGRTVDVKRA 80
>gi|307136289|gb|ADN34116.1| heterogeneous nuclear ribonucleoprotein a1 [Cucumis melo subsp.
melo]
Length = 699
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-- 143
KKIFVG +P T + + YFS FGRI++ + D K RGFGF+TF E D +
Sbjct: 510 KKIFVGGIPPGLTEVEFKDYFSSFGRIIEHQIMIDYKTKRSRGFGFITFENEDSVDNIFS 569
Query: 144 SRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWG 203
R HE+ G+QV I A P A +F N+ T GY M G +Y + D+G
Sbjct: 570 GDRIHELGGKQVEIKKAVPKKVA---YDFNSNSGHTSSGY--DMYRCGGLYDDIIGTDFG 624
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADRVSR 145
K+FVG + E T + YFS++G I D + D K TG RGFGFVTF + +AD V +
Sbjct: 422 KLFVGGVAWETTEDTFSDYFSKYGEIADSVIMID-KHTGRPRGFGFVTFCDPAIADMVLK 480
Query: 146 RSHEICGQQVAIDSATPLDD 165
H I G+ V + P D
Sbjct: 481 IDHIIDGRAVEVKRTVPRAD 500
>gi|61806598|ref|NP_001013534.1| RNA-binding protein Musashi homolog 1 [Danio rerio]
gi|60688517|gb|AAH90916.1| Musashi homolog 1 (Drosophila) [Danio rerio]
gi|182888902|gb|AAI64361.1| Msi1 protein [Danio rerio]
gi|379056199|dbj|BAL68141.1| RNA-binding protein Musashi homolog 1 Short [Danio rerio]
Length = 330
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPT 193
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + T E L+ YF +FG + + V +DP RGFGFVTF ++ D+V ++
Sbjct: 21 KMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 146 RSHEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 81 TRHELDSKTIDPKVAFP 97
>gi|431914268|gb|ELK15526.1| RNA-binding protein Musashi like protein 1 [Pteropus alecto]
Length = 281
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 58 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 117
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 118 IHFHEINNKMVECKKAQPKEVMSPT 142
>gi|348516192|ref|XP_003445623.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Oreochromis
niloticus]
Length = 329
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPT 193
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + T E L+ YF ++G + + V +DP RGFGFVTF ++ D+V ++
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 146 RSHEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 81 TRHELDSKTIDPKVAFP 97
>gi|15242719|ref|NP_198865.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Arabidopsis
thaliana]
gi|9758076|dbj|BAB08520.1| unnamed protein product [Arabidopsis thaliana]
gi|22531255|gb|AAM97131.1| ribonucleoprotein-like [Arabidopsis thaliana]
gi|332007170|gb|AED94553.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Arabidopsis
thaliana]
Length = 423
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG L +E T+ + ++F ++G I D + KD K RGFGFVT+A+ V D+V +
Sbjct: 43 KIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVIQD 102
Query: 147 SHEICGQQVAIDSATP 162
+H I G+QV I P
Sbjct: 103 NHIIIGKQVEIKRTIP 118
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG +P ++ + +F +FG + + + +D RGFGFVT+ E + D +
Sbjct: 130 KKIFVGGIPSSVDDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLA 189
Query: 146 RSH--EICGQQVAIDSATP 162
+ + E+ G QV I A P
Sbjct: 190 KGNRIELSGTQVEIKKAEP 208
>gi|16041061|dbj|BAB69768.1| Musashi1 [Homo sapiens]
Length = 181
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 46 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 105
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 106 IHFHEINNKMVECKKAQPKEVMSPT 130
>gi|449019177|dbj|BAM82579.1| probable heterogeneous nuclear RNP protein A [Cyanidioschyzon
merolae strain 10D]
Length = 273
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
+K+FVG L + L YF RFG+++D V ++ + RGFGFVTF EE VA V S
Sbjct: 8 RKVFVGGLSWDTNEASLVAYFERFGKVIDAVVMRNRETGQPRGFGFVTFEEEGVAQAVAS 67
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGS 196
HE+ G+ V A P P N +++ A+ +G G + R+Y S
Sbjct: 68 LERHELDGRLVETKVAVPKSAEDPESNTVVDTAQRYGPSGLGEKPSRRVYVS 119
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%)
Query: 75 YGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF 134
YG ++ ++++V LPQ T +DLR +FSRFG + V V D +G+GFV F
Sbjct: 103 YGPSGLGEKPSRRVYVSGLPQACTEDDLRAFFSRFGSLEAVRVVVDHHTGLSKGYGFVVF 162
Query: 135 AEEVVADRV 143
AE + +V
Sbjct: 163 AETAASQKV 171
>gi|16041059|dbj|BAB69767.1| Musashi1 [Homo sapiens]
Length = 180
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 46 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 105
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 106 IHFHEINNKMVECKKAQPKEVMSPT 130
>gi|326501296|dbj|BAJ98879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 354
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG LP++ T +++F +G I+D + K+ + + RGFGF+T+++ V D+V
Sbjct: 24 KIFVGGLPRDTTLATFQKHFGNYGVIVDSVIMKNKQTSQPRGFGFITYSDPAVVDKVMED 83
Query: 147 SHEICGQQVAIDSATPLD 164
+H I G+QV I P D
Sbjct: 84 THVINGKQVEIKRTIPKD 101
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 44/161 (27%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D V+ +M DTH + G V + R PK+
Sbjct: 73 DPAVVDKVMEDTHVINGKQVEIKRTIPKD------------------------------- 101
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
Y + KKIFVG LP T +D + +F ++G +++ + +D +
Sbjct: 102 -----------YMKSNPKDFRTKKIFVGGLPPILTEDDFKDFFEKYGAVVEHQIMRDHQT 150
Query: 124 TGHRGFGFVTF-AEEVVADRVSRRSH-EICGQQVAIDSATP 162
RGFGFV F +EEVV D ++ + ++ G +V I A P
Sbjct: 151 RRSRGFGFVVFESEEVVDDLLANGNMIDLAGSKVEIKKAEP 191
>gi|442633006|ref|NP_001261979.1| RNA-binding protein 6, isoform G [Drosophila melanogaster]
gi|440215929|gb|AGB94672.1| RNA-binding protein 6, isoform G [Drosophila melanogaster]
Length = 371
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG I D + D + HRGFGFVTF E V D+V
Sbjct: 118 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 177
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGY 204
HEI + V A P + P+ N A+T R G +D+ +
Sbjct: 178 IHFHEINNKMVECKKAQPKEVMLPA-----NLAKT------------RAAGRSAYDNIMW 220
Query: 205 GMGS 208
G+G+
Sbjct: 221 GLGT 224
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + + E LR YF R+G I + V KDP RGFGFVTF++ D+V ++
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
Query: 146 RSHEICGQQVAIDSATP 162
+HE+ G++V A P
Sbjct: 90 GTHELDGKKVDPKVAFP 106
>gi|383851135|ref|XP_003701095.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Megachile
rotundata]
Length = 362
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + ED++ +FS+FG I+DV +P D + +GF F+TF +E+VV + +
Sbjct: 135 KIFVGGLSTELSDEDIKNFFSQFGTIVDVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 194
Query: 146 RSHEICGQQVAIDSATP 162
I G++V + ATP
Sbjct: 195 PKQTINGKEVDVKKATP 211
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
+K+FVG L E T ++LR +F +G I + V DP RGF F+ FA+ D++ S
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMS 113
Query: 145 RRSHEICGQQV 155
H I G++V
Sbjct: 114 ANDHIINGKKV 124
>gi|195125567|ref|XP_002007249.1| GI12835 [Drosophila mojavensis]
gi|193918858|gb|EDW17725.1| GI12835 [Drosophila mojavensis]
Length = 383
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG I D + D + HRGFGFVTF E V D+V
Sbjct: 132 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 191
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGY 204
HEI + V A P + P+ N A+T R G +D+ +
Sbjct: 192 IHFHEINNKMVECKKAQPKEVMLPA-----NLAKT------------RAAGRSAYDNIMW 234
Query: 205 GMGS 208
G+G+
Sbjct: 235 GLGT 238
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + + E LR YF R+G I + V KDP RGFGFVTF++ D+V ++
Sbjct: 44 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 103
Query: 146 RSHEICGQQVAIDSATP 162
+HE+ G++V A P
Sbjct: 104 GTHELDGKKVDPKVAFP 120
>gi|195112196|ref|XP_002000660.1| GI22407 [Drosophila mojavensis]
gi|193917254|gb|EDW16121.1| GI22407 [Drosophila mojavensis]
Length = 679
Score = 67.0 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG + Q+ +A++++ YFS+FG + + + D + HRGFGFVTF E V DRV
Sbjct: 314 KKIFVGGVSQDTSADEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 373
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFM 173
H I ++V A P + P+ +
Sbjct: 374 IHFHTIKNKKVECKKAQPKEAVTPAAQLL 402
Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + ++E L+ YF+ FG + DV + KDP RGFGF+TF E D+V +
Sbjct: 227 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 286
Query: 147 S-HEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 287 PIHTLDGKKIDPKHATP 303
>gi|195442400|ref|XP_002068946.1| GK18043 [Drosophila willistoni]
gi|194165031|gb|EDW79932.1| GK18043 [Drosophila willistoni]
Length = 386
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG I D + D + HRGFGFVTF E V D+V
Sbjct: 132 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 191
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGY 204
HEI + V A P + P+ N A+T R G +D+ +
Sbjct: 192 IHFHEINNKMVECKKAQPKEVMLPA-----NLAKT------------RAAGRSAYDNIMW 234
Query: 205 GMGS 208
G+G+
Sbjct: 235 GLGT 238
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + + E LR YF R+G I + V KDP RGFGFVTF++ D+V ++
Sbjct: 44 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 103
Query: 146 RSHEICGQQVAIDSATP 162
+HE+ G++V A P
Sbjct: 104 GTHELDGKKVDPKVAFP 120
>gi|125577795|gb|EAZ19017.1| hypothetical protein OsJ_34549 [Oryza sativa Japonica Group]
Length = 481
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T D R+YF +FG I DV V D RGFGF+T+ E D+
Sbjct: 120 KKIFVGGLASTVTEADFRKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF 179
Query: 146 RS-HEICGQQVAIDSATPLD-DAGPSQ-------NFMMNAAETF 180
++ HE+ G+ V + A P + GPS N+ +N A F
Sbjct: 180 KTFHELNGKMVEVKRAVPKELSPGPSMRSPVGGFNYAVNRANNF 223
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + + LR YF ++G +++ + +D RGFGF+ FA+ VA+RV
Sbjct: 7 KLFIGGISWDTNEDRLREYFDKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 66
Query: 147 SHEICGQQVAIDSATPLD 164
H I G+ + D LD
Sbjct: 67 KHMIDGRMIHDDDDGVLD 84
>gi|195571113|ref|XP_002103548.1| GD20486 [Drosophila simulans]
gi|194199475|gb|EDX13051.1| GD20486 [Drosophila simulans]
Length = 345
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E+++ YF +FG I++V +P D +++ +GF F+TF +E+VV D +
Sbjct: 137 KIFVGFLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 196
Query: 146 RSHEICGQQVAIDSATP 162
+I G++V + ATP
Sbjct: 197 PKQKIAGKEVDVKRATP 213
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVG L E T ++LR +F ++G I + V DP+ RGF F+ F ++VS
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEKVSA 115
Query: 146 -RSHEICGQQVAIDSA 160
H I ++V + A
Sbjct: 116 VEEHIINSKKVDLPKA 131
>gi|195329216|ref|XP_002031307.1| GM25920 [Drosophila sechellia]
gi|194120250|gb|EDW42293.1| GM25920 [Drosophila sechellia]
Length = 345
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E+++ YF +FG I++V +P D +++ +GF F+TF +E+VV D +
Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 196
Query: 146 RSHEICGQQVAIDSATP 162
+I G++V + ATP
Sbjct: 197 PKQKIAGKEVDVKRATP 213
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVG L E T ++LR +F ++G I + V DP+ RGF F+ F ++VS
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEKVSA 115
Query: 146 -RSHEICGQQV 155
H I ++V
Sbjct: 116 VEEHIINSKKV 126
>gi|403281821|ref|XP_003932373.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Saimiri
boliviensis boliviensis]
Length = 352
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 110 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMSPT 194
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + T E LR YF +FG + + V +DP RGFGFVTF ++ D+V +
Sbjct: 22 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 81
Query: 147 S-HEICGQQVAIDSATP 162
S HE+ + + A P
Sbjct: 82 SRHELDSKTIDPKVAFP 98
>gi|194748703|ref|XP_001956784.1| GF24401 [Drosophila ananassae]
gi|190624066|gb|EDV39590.1| GF24401 [Drosophila ananassae]
Length = 370
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG I D + D + HRGFGFVTF E V D+V
Sbjct: 119 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 178
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGY 204
HEI + V A P + P+ N A+T R G +D+ +
Sbjct: 179 IHFHEINNKMVECKKAQPKEVMLPA-----NLAKT------------RAAGRSAYDNIMW 221
Query: 205 GMGS 208
G+G+
Sbjct: 222 GLGT 225
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + + E LR YF R+G I + V KDP RGFGFVTF++ D+V ++
Sbjct: 31 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 90
Query: 146 RSHEICGQQVAIDSATP 162
+HE+ G++V A P
Sbjct: 91 GTHELDGKKVDPKVAFP 107
>gi|357447959|ref|XP_003594255.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483303|gb|AES64506.1| RNA-binding protein, putative [Medicago truncatula]
Length = 446
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 31/162 (19%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E ++++ H + G TV +A P++D N + + +
Sbjct: 19 DPSVAERVVMEKHVIDGRTVEAKKAVPRDDQ---------------NVFTRSNSSSHGSP 63
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
APT KKIFVG L T D + YF +FG I DV V D
Sbjct: 64 APTPIRT---------------KKIFVGGLASTVTESDFKNYFDQFGTITDVVVMYDHNT 108
Query: 124 TGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLD 164
RGFGF+T+ +EE V + + HE+ G+ V + A P D
Sbjct: 109 QRPRGFGFITYDSEEAVEKVLHKTFHELNGKMVEVKRAVPKD 150
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%)
Query: 127 RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD 165
RGFGFV FA+ VA+RV H I G+ V A P DD
Sbjct: 10 RGFGFVVFADPSVAERVVMEKHVIDGRTVEAKKAVPRDD 48
>gi|16041063|dbj|BAB69769.1| Musashi1 [Homo sapiens]
Length = 181
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 46 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 105
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 106 IHFHEINNKMVECKKAQPKEVMSPT 130
>gi|115482462|ref|NP_001064824.1| Os10g0470900 [Oryza sativa Japonica Group]
gi|10716605|gb|AAG21903.1|AC026815_7 putative RNA binding protein [Oryza sativa Japonica Group]
gi|31432618|gb|AAP54226.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113639433|dbj|BAF26738.1| Os10g0470900 [Oryza sativa Japonica Group]
Length = 464
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 69/160 (43%), Gaps = 11/160 (6%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D SV+ +VD H L G TV V RA +E+ A N G
Sbjct: 56 DPSSVDAALVDPHTLDGRTVDVKRALSREE---------QQAAKAANPSAGGRHASGGGG 106
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
G G R KKIFVG LP T ++ R+YF +G + DV V D
Sbjct: 107 GGGGAGGGGGGGGGDAGGART-KKIFVGGLPSNLTEDEFRQYFQTYGVVTDVVVMYDQNT 165
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP 162
RGFGF+TF E DRV ++ H++ G+ V + A P
Sbjct: 166 QRPRGFGFITFDAEDAVDRVLHKTFHDLSGKMVEVKRALP 205
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADRVSR 145
K+F+G + E T E LR +F+ +G + V +D K TG RGFGFV F++ D
Sbjct: 7 KLFIGGISWETTEEKLRDHFAAYGDVSQAAVMRD-KLTGRPRGFGFVVFSDPSSVDAALV 65
Query: 146 RSHEICGQQVAIDSA 160
H + G+ V + A
Sbjct: 66 DPHTLDGRTVDVKRA 80
>gi|148909135|gb|ABR17668.1| unknown [Picea sitchensis]
Length = 411
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 6/98 (6%)
Query: 77 RGESSQR-IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF- 134
RG SS+ KK+FVG +P T ++ + YFS+FG++++ + +D RGFGF+TF
Sbjct: 119 RGNSSKAPKTKKVFVGGIPTSITEDEFKDYFSKFGKVVEHQIMQDRNTGRSRGFGFITFE 178
Query: 135 AEEVVADRVSR-RSHEICGQQVAIDSA---TPLDDAGP 168
E+ V + +S+ R E+ G+QV I A PL DAGP
Sbjct: 179 TEQAVEEIISQGRMLELGGKQVEIKKAEPKKPLPDAGP 216
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L + T+ ++FS++G + D + KD RGFGFVT+A+ V D+V +
Sbjct: 43 KIFIGGLSRSTTSSAFTKHFSKYGELTDSVIMKDRLTGQPRGFGFVTYADPSVIDKVIQD 102
Query: 147 SHEICGQQVAIDSATP 162
H + G+ V I P
Sbjct: 103 KHILDGKTVEIKRTIP 118
>gi|221331233|ref|NP_001137961.1| RNA-binding protein 6, isoform D [Drosophila melanogaster]
gi|220902621|gb|ACL83316.1| RNA-binding protein 6, isoform D [Drosophila melanogaster]
Length = 162
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG I D + D + HRGFGFVTF E V D+V
Sbjct: 6 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 65
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGY 204
HEI + V A P + P+ N A+T R G +D+ +
Sbjct: 66 IHFHEINNKMVECKKAQPKEVMLPA-----NLAKT------------RAAGRSAYDNIMW 108
Query: 205 GMGS 208
G+G+
Sbjct: 109 GLGT 112
>gi|17137616|ref|NP_477400.1| TAR DNA-binding protein-43 homolog, isoform B [Drosophila
melanogaster]
gi|19549788|ref|NP_599145.1| TAR DNA-binding protein-43 homolog, isoform C [Drosophila
melanogaster]
gi|24762415|ref|NP_726373.1| TAR DNA-binding protein-43 homolog, isoform D [Drosophila
melanogaster]
gi|281364145|ref|NP_001163280.1| TAR DNA-binding protein-43 homolog, isoform E [Drosophila
melanogaster]
gi|281364147|ref|NP_001163281.1| TAR DNA-binding protein-43 homolog, isoform F [Drosophila
melanogaster]
gi|19528241|gb|AAL90235.1| GH09868p [Drosophila melanogaster]
gi|21626670|gb|AAF47079.2| TAR DNA-binding protein-43 homolog, isoform B [Drosophila
melanogaster]
gi|21626671|gb|AAF47078.2| TAR DNA-binding protein-43 homolog, isoform C [Drosophila
melanogaster]
gi|21626672|gb|AAM68274.1| TAR DNA-binding protein-43 homolog, isoform D [Drosophila
melanogaster]
gi|63108407|gb|AAY33499.1| RH39704p [Drosophila melanogaster]
gi|220946666|gb|ACL85876.1| TBPH-PB [synthetic construct]
gi|220956308|gb|ACL90697.1| TBPH-PB [synthetic construct]
gi|272432674|gb|ACZ94552.1| TAR DNA-binding protein-43 homolog, isoform E [Drosophila
melanogaster]
gi|272432675|gb|ACZ94553.1| TAR DNA-binding protein-43 homolog, isoform F [Drosophila
melanogaster]
Length = 531
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
++ K+FVGR ++ ++DLR YFS+FG + DV++P+ R F FVTF + VA
Sbjct: 188 HQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRP-----FRAFSFVTFLDPDVAQ 242
Query: 142 RVSRRSHEICGQQVAIDSATPLDDAGPS---QNFMMNAAETFG 181
+ H I G V + +A P + + Q++ N+A +FG
Sbjct: 243 SLCGEDHIIKGVSVHVSNAAPKAEQNRNQQVQSYNYNSANSFG 285
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E+ R I +G LP + T E LR YF +G +L + KD K +GFGFV F
Sbjct: 99 RIETRLRCTDLIVLG-LPWKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGFGFVRFGS 157
Query: 137 EVVADRVSRRSHEICGQQVAI 157
RV H I G+ +
Sbjct: 158 YDAQMRVLTNRHLIDGRWCEV 178
>gi|242006645|ref|XP_002424159.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
gi|212507484|gb|EEB11421.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
Length = 423
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VSR 145
K+F+G LP T DLR++F R+G++++V + D ++ RGFGF++F +E +R V+
Sbjct: 110 KVFLGGLPSNVTETDLRQFFMRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVERCVAD 169
Query: 146 RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFG 181
+ G+QV I A P D +G M ++ T+G
Sbjct: 170 HFVNLHGKQVEIKKAEPRDASGK----MNDSGNTWG 201
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEV-VADRVSR 145
K+FVG L E T E L+RYFSR+G ++D V K+ + RGFGFVTFA+ V +
Sbjct: 20 KLFVGGLSWETTQEALQRYFSRYGDVVDCVVMKNTESGRSRGFGFVTFADPTNVGVVLQN 79
Query: 146 RSHEICGQQVAIDSATPLDDAGPSQN 171
H + G+ + P + P +N
Sbjct: 80 GPHVLDGRTIDPKPCNPRTLSKPKRN 105
>gi|195347229|ref|XP_002040156.1| GM15502 [Drosophila sechellia]
gi|195586189|ref|XP_002082860.1| GD25005 [Drosophila simulans]
gi|194135505|gb|EDW57021.1| GM15502 [Drosophila sechellia]
gi|194194869|gb|EDX08445.1| GD25005 [Drosophila simulans]
Length = 531
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVGR ++ ++DLR YFS+FG + DV++P+ R F FVTF + VA +
Sbjct: 193 KVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRP-----FRAFSFVTFLDPDVAQSLCGE 247
Query: 147 SHEICGQQVAIDSATPLDDAGPS---QNFMMNAAETFG 181
H I G V + +A P + + Q++ N+A +FG
Sbjct: 248 DHIIKGVSVHVSNAAPKAEQNRNQQVQSYNYNSANSFG 285
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E+ R I +G LP + T E LR YF +G +L + KD K +GFGFV F
Sbjct: 99 RIETRLRCTDLIVLG-LPWKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGFGFVRFGS 157
Query: 137 EVVADRVSRRSHEICGQQVAI 157
RV H I G+ +
Sbjct: 158 YDAQMRVLTNRHLIDGRWCEV 178
>gi|3882096|dbj|BAA34421.1| TAR-binding protein [Drosophila melanogaster]
gi|3882126|dbj|BAA34428.1| TAR-binding protein [Drosophila melanogaster]
gi|3882128|dbj|BAA34429.1| TAR-binding protein [Drosophila melanogaster]
Length = 531
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
++ K+FVGR ++ ++DLR YFS+FG + DV++P+ R F FVTF + VA
Sbjct: 188 HQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRP-----FRAFSFVTFLDPDVAQ 242
Query: 142 RVSRRSHEICGQQVAIDSATPLDDAGPS---QNFMMNAAETFG 181
+ H I G V + +A P + + Q++ N+A +FG
Sbjct: 243 SLCGEDHIIKGVSVHVSNAAPKAEQNRNQQVQSYNYNSANSFG 285
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E+ R I +G LP + T E LR YF +G +L + KD K +GFGFV F
Sbjct: 99 RIETRLRCTDLIVLG-LPWKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGFGFVRFGS 157
Query: 137 EVVADRVSRRSHEICGQQVAI 157
RV H I G+ +
Sbjct: 158 YDAQMRVLTNRHLIDGRWCEV 178
>gi|326494758|dbj|BAJ94498.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 494
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + E + LR YF RFG + + + +D RGFGF+ FAE VA+RV+
Sbjct: 30 KLFVGGISWETDEDRLRDYFGRFGEVTEAVIMRDRNTGRARGFGFIVFAEAGVAERVTMD 89
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD Q+ + G GP+RT G L
Sbjct: 90 KHMIDGRMVEAKKAVPRDD----QSIASKNNGSSIGSPGPVRTRKIFVGGL 136
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 94/229 (41%), Gaps = 64/229 (27%)
Query: 8 VENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAPTL 67
E + +D H + G V +A P++D I++ +++G+P
Sbjct: 83 AERVTMDKHMIDGRMVEAKKAVPRDDQ-----------------SIASKNNGSSIGSP-- 123
Query: 68 YDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHR 127
G R KIFVG L T + RRYF +FG I DV V D R
Sbjct: 124 ----------GPVRTR---KIFVGGLASNVTEVEFRRYFEQFGMITDVVVMYDHNTQRPR 170
Query: 128 GFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDDA-GP-------SQNFMMNAAE 178
GFGF+T+ E D+ ++ HE+ G+ V + A P + + GP QN ++
Sbjct: 171 GFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPKEQSPGPVARSPAGGQNLAISRVH 230
Query: 179 TF-------------GGYGGPMRTYGRMYGSLD-----FDDWG--YGMG 207
F GGYG MR GR +G L F +G YGMG
Sbjct: 231 NFLNGFNQGYNPNPIGGYG--MRVDGR-FGLLSGARNGFSSFGPSYGMG 276
>gi|170579059|ref|XP_001894657.1| RNA binding protein [Brugia malayi]
gi|158598628|gb|EDP36488.1| RNA binding protein, putative [Brugia malayi]
Length = 222
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KK+F+G L +T ED++ YF ++G++ D + D HRGFGF+TF + V+D+V
Sbjct: 6 KKVFIGGLSATSTLEDMKNYFEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDDVSDKVCE 65
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQ 170
HEI G+ V A P + P Q
Sbjct: 66 IHFHEINGKMVECKKAQPKEVMLPVQ 91
>gi|326525423|dbj|BAJ88758.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 471
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + E + LR YF RFG + + + +D RGFGF+ FAE VA+RV+
Sbjct: 7 KLFVGGISWETDEDRLRDYFGRFGEVTEAVIMRDRNTGRARGFGFIVFAEAGVAERVTMD 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD Q+ + G GP+RT G L
Sbjct: 67 KHMIDGRMVEAKKAVPRDD----QSIASKNNGSSIGSPGPVRTRKIFVGGL 113
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 94/229 (41%), Gaps = 64/229 (27%)
Query: 8 VENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAPTL 67
E + +D H + G V +A P++D I++ +++G+P
Sbjct: 60 AERVTMDKHMIDGRMVEAKKAVPRDDQ-----------------SIASKNNGSSIGSP-- 100
Query: 68 YDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHR 127
G R KIFVG L T + RRYF +FG I DV V D R
Sbjct: 101 ----------GPVRTR---KIFVGGLASNVTEVEFRRYFEQFGMITDVVVMYDHNTQRPR 147
Query: 128 GFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDDA-GP-------SQNFMMNAAE 178
GFGF+T+ E D+ ++ HE+ G+ V + A P + + GP QN ++
Sbjct: 148 GFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPKEQSPGPVARSPAGGQNLAISRVH 207
Query: 179 TF-------------GGYGGPMRTYGRMYGSLD-----FDDWG--YGMG 207
F GGYG MR GR +G L F +G YGMG
Sbjct: 208 NFLNGFNQGYNPNPIGGYG--MRVDGR-FGLLSGARNGFSSFGPSYGMG 253
>gi|270014210|gb|EFA10658.1| hypothetical protein TcasGA2_TC016295 [Tribolium castaneum]
Length = 300
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG I D + D + HRGFGFVTF E V D+V
Sbjct: 6 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 65
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQ 170
HEI + V A P + P+
Sbjct: 66 IHFHEINNKMVECKKAQPKEVMLPAN 91
>gi|102140031|gb|ABF70162.1| RNA-binding protein, putative [Musa acuminata]
Length = 465
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + + LR+YFS FG +++ + KD RGFGFV FA+ V +RV
Sbjct: 7 KLFIGGISWDTNEDSLRKYFSAFGEVVEAVIMKDRTTGRARGFGFVVFADPAVTERVVTE 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 KHTIDGRMVEAKKAVPRDD 85
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T D ++YF +FG I DV V D RGFGF+T+ E D+V
Sbjct: 107 KKIFVGGLSSTITEGDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKVLL 166
Query: 146 RS-HEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGY 183
+ HE+ G+ V + A P + PS +M + + GGY
Sbjct: 167 NAFHELNGKMVEVKRAVPKE---PSPGPIMRS--SIGGY 200
Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 5 QDSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGGY 46
+D+V+ ++++ HEL G V V RA PKE P+ R S GGY
Sbjct: 158 EDAVDKVLLNAFHELNGKMVEVKRAVPKEPSPGPIMRSSIGGY 200
>gi|15292697|gb|AAK92717.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 494
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + E L+ YFS FG +++ + KD RGFGFV FA+ VA+ V
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFM--MNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P DD QN + N++ G GP RT G L
Sbjct: 67 KHNIDGRLVEAKKAVPRDD----QNMVNRSNSSSIQGSPSGPGRTRKIFVGGL 115
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
+KIFVG LP T D + YF +FG DV V D RGFGF+T+ +EE V +
Sbjct: 108 RKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLL 167
Query: 145 RRSHEICGQQVAIDSATPLD-DAGPSQ 170
+ HE+ G+ V + A P + GPS+
Sbjct: 168 KTFHELNGKMVEVKRAVPKELSPGPSR 194
>gi|242014750|ref|XP_002428048.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512567|gb|EEB15310.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 371
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
GRG+++ + KKIFVG + Q+ ++++++ YFS+FG++ + + D + HRGFGFVTF
Sbjct: 138 GRGKTNGKT-KKIFVGGVSQDTSSDEVKVYFSQFGKVEEAVMLMDQQTKRHRGFGFVTFE 196
Query: 136 EEVVADRVSR-RSHEICGQQVAIDSATP 162
E DRV H I ++V A P
Sbjct: 197 NEETVDRVCEIHFHNIKNKKVECKKAMP 224
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + ++E LR+YF FG I DV + KDP RGFGF+TF E + V +
Sbjct: 60 KLFVGGLSWQTSSEKLRQYFGMFGNITDVLIMKDPVTQRSRGFGFITFEEPSSVENVLKV 119
Query: 147 -SHEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 120 PVHTLDGKKIDPKHATP 136
>gi|195453885|ref|XP_002073986.1| GK12850 [Drosophila willistoni]
gi|194170071|gb|EDW84972.1| GK12850 [Drosophila willistoni]
Length = 641
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG + Q+ +A++++ YFS+FG + + + D + HRGFGFVTF E V DRV
Sbjct: 287 KKIFVGGVSQDTSADEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 346
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQNFM 173
H I ++V A P + P+ +
Sbjct: 347 IHFHTIKNKKVECKKAQPKEAVTPAAQLL 375
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + ++E L+ YF+ FG + DV + KDP RGFGF+TF E D+V +
Sbjct: 200 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 259
Query: 147 S-HEICGQQVAIDSATP 162
H + G+++ ATP
Sbjct: 260 PIHTLDGKKIDPKHATP 276
>gi|170057997|ref|XP_001864728.1| TAR DNA-binding protein 43 [Culex quinquefasciatus]
gi|167877238|gb|EDS40621.1| TAR DNA-binding protein 43 [Culex quinquefasciatus]
Length = 540
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
+ + ++ KIF+GR+ ++ TA+D+R YFS++G + DV++PK R F FVTF +
Sbjct: 200 KDQMQHQMPSKIFLGRVTEDMTADDIREYFSKYGEVTDVFIPKP-----FRAFAFVTFID 254
Query: 137 EVVADRVSRRSHEICGQQVAIDSATP 162
VA + H I G V + +A+P
Sbjct: 255 PHVAQSLCGEDHLIKGASVYVSTASP 280
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 5/124 (4%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E+ R + V LP + T E LR YF FG +L V + KD K +G+GF+ FA+
Sbjct: 114 RIENRNRTTTDLIVLGLPWKTTEEGLREYFDVFGDLLVVQIKKDAKTGQSKGYGFIRFAK 173
Query: 137 EVVADRVSRRSHEICGQQVAI---DSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRM 193
+ + H I G+ + S + PS+ F+ E +R Y
Sbjct: 174 FESQMKALSKRHLIDGRWCDVKVPSSKDQMQHQMPSKIFLGRVTEDMT--ADDIREYFSK 231
Query: 194 YGSL 197
YG +
Sbjct: 232 YGEV 235
>gi|327282604|ref|XP_003226032.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Anolis carolinensis]
Length = 325
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 110 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMSPT 194
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + T E LR YF +FG + + V +DP RGFGFVTF ++ D+V +
Sbjct: 22 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVDQAGVDKVLAQ 81
Query: 147 S-HEICGQQVAIDSATP 162
S HE+ + + A P
Sbjct: 82 SRHELDSKTIDPKVAFP 98
>gi|154799958|dbj|BAF75024.1| Musashi-1c [Cynops pyrrhogaster]
Length = 342
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCE 168
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQN 171
HEI + V A P + P+ +
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPTSS 195
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + T E LR YF ++G + + V +DP RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 147 S-HEICGQQVAIDSATP 162
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|410922317|ref|XP_003974629.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Takifugu rubripes]
Length = 329
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPA 193
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + T E L+ YF ++G + + V +DP RGFGFVTF ++ D+V ++
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 146 RSHEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 81 TRHELDSKTIDPKVAFP 97
>gi|449477049|ref|XP_002196403.2| PREDICTED: RNA-binding protein Musashi homolog 1 [Taeniopygia
guttata]
Length = 330
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 88 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 147
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 148 IHFHEINNKMVECKKAQPKEVMSPT 172
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+F+G L + T E LR YFS+FG + + V +DP RGFGFVTF ++ D+V +S
Sbjct: 1 MFIGGLSWQTTQEGLREYFSQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 60
Query: 148 -HEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 61 RHELDSKTIDPKVAFP 76
>gi|379056197|dbj|BAL68140.1| RNA-binding protein Musashi homolog 1 Long [Danio rerio]
Length = 349
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPT 193
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + T E L+ YF +FG + + V +DP RGFGFVTF ++ D+V ++
Sbjct: 21 KMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 146 RSHEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 81 TRHELDSKTIDPKVAFP 97
>gi|348508130|ref|XP_003441608.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Oreochromis niloticus]
Length = 332
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 111 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 170
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 171 IHFHEINNKMVECKKAQPKEVMTPT 195
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + T E L+ YF +FG + + V +DP RGFGFVT+AE+ ++V ++
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQ 82
Query: 146 RSHEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 83 NRHELDSKTIDPKVAFP 99
>gi|154799960|dbj|BAF75025.1| Musashi-1d [Cynops pyrrhogaster]
Length = 327
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCE 168
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQN 171
HEI + V A P + P+ +
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPTSS 195
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + T E LR YF ++G + + V +DP RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 147 S-HEICGQQVAIDSATP 162
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|119618593|gb|EAW98187.1| musashi homolog 1 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 343
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPT 193
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + T E LR YF +FG + + V +DP RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 147 S-HEICGQQVAIDSATP 162
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|395833926|ref|XP_003789968.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Otolemur
garnettii]
Length = 341
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 88 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 147
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 148 IHFHEINNKMVECKKAQPKEVMSPT 172
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+F+G L + T E LR YF +FG + + V +DP RGFGFVTF ++ D+V +S
Sbjct: 1 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 60
Query: 148 -HEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 61 RHELDSKTIDPKVAFP 76
>gi|156538565|ref|XP_001607438.1| PREDICTED: hypothetical protein LOC100123736 [Nasonia vitripennis]
Length = 395
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R + + R KKIFVG + Q+ ++E+++ YF++FG++ + + D + HRGFGFVTF
Sbjct: 135 RAKQANRT-KKIFVGGVSQDTSSEEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFEN 193
Query: 137 EVVADRVSR-RSHEICGQQVAIDSATPLDDAGP 168
E V DRV H I ++V A P + P
Sbjct: 194 EDVVDRVCEIHFHTIKNKKVECKKAQPKEAVQP 226
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + ++E LR YF FG + DV + KDP RGFGF+TFAE D+V +
Sbjct: 56 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 115
Query: 147 S-HEICGQQVAIDSATPLDDA 166
H + G+++ ATP + A
Sbjct: 116 PIHTLDGKKIDPKHATPKNRA 136
>gi|410976792|ref|XP_003994797.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Felis catus]
Length = 380
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 127 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 186
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 187 IHFHEINNKMVECKKAQPKEVMSPT 211
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 90 VGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS-H 148
+G L + T E LR YF +FG + + V +DP RGFGFVTF ++ D+V +S H
Sbjct: 42 IGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRH 101
Query: 149 EICGQQVAIDSATP 162
E+ + + A P
Sbjct: 102 ELDSKTIDPKVAFP 115
>gi|71027799|ref|XP_763543.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350496|gb|EAN31260.1| nucleic acid binding factor, putative [Theileria parva]
Length = 421
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 64 APTLYDHPGSFYGRGESS--QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDP 121
AP Y Y G + R K+FVGR+ E + LR YFS+FG ++DVY+PKDP
Sbjct: 314 APKTYSDGSRTYSNGSRNGRDRSIPKLFVGRIAFETSVHSLRTYFSQFGEVIDVYIPKDP 373
Query: 122 KRTGHRGFGFVTFAEE--VVADRVSRRSHEICGQQVAIDSA 160
+GFGF+TFA + + + H + G+++ +D A
Sbjct: 374 HTQKGKGFGFITFANKNSIHSALDPSLKHVVDGREIIVDYA 414
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTG-HRGFGFVTFAEEVVADRV 143
+IF+ R+ EAT +DL YF +FG + D Y P+ +G ++GFGF++F E +V
Sbjct: 117 ANRIFITRIAFEATKDDLEDYFKKFGTVYDAYCPRQNNYSGLNKGFGFISFENEDSIRKV 176
Query: 144 SRR-SHEICGQQVAIDSAT 161
H I G++V +D AT
Sbjct: 177 FESGPHVIMGREVIVDRAT 195
>gi|432952700|ref|XP_004085203.1| PREDICTED: RNA-binding protein Musashi homolog 1-like, partial
[Oryzias latipes]
Length = 260
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 20 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 79
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 80 IHFHEINNKMVECKKAQPKEVMSPT 104
>gi|348584450|ref|XP_003477985.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cavia
porcellus]
Length = 366
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 113 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 172
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 173 IHFHEINNKMVECKKAQPKEVMSPT 197
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + T E LR YF +FG + + V +DP RGFGFVTF ++ D+V +
Sbjct: 25 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 84
Query: 147 S-HEICGQQVAIDSATP 162
S HE+ + + A P
Sbjct: 85 SRHELDSKTIDPKVAFP 101
>gi|89257506|gb|ABD64996.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing
protein [Brassica oleracea]
Length = 587
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T + ++YF++FG I DV V D + RGFGF++F E D+V +
Sbjct: 107 KKIFVGGLASSVTEAEFKKYFAQFGVITDVVVMYDHRTQRPRGFGFISFESEDAVDKVLQ 166
Query: 146 RS-HEICGQQVAIDSATPLDDA-GPSQNFM 173
R+ HE+ G+ V + A P + A P +N M
Sbjct: 167 RTFHELNGKMVEVKLAVPKEMALNPIRNQM 196
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + E T + LR YF FG +L+ + KD RGFGF+ F++ +VA+RV
Sbjct: 7 KLFIGGISWETTEDRLREYFQSFGEVLEAVIMKDRATGRARGFGFLVFSDPIVAERVVFL 66
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 67 RHVIDGKLVEAKKAVPRDD 85
>gi|348508132|ref|XP_003441609.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Oreochromis niloticus]
Length = 363
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 111 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 170
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 171 IHFHEINNKMVECKKAQPKEVMTPT 195
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + T E L+ YF +FG + + V +DP RGFGFVT+AE+ ++V ++
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQ 82
Query: 146 RSHEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 83 NRHELDSKTIDPKVAFP 99
>gi|432092848|gb|ELK25214.1| RNA-binding protein Musashi like protein 1 [Myotis davidii]
Length = 419
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 74 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 133
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 134 IHFHEINNKMVECKKAQPKEVMSPT 158
>gi|395744950|ref|XP_002823898.2| PREDICTED: RNA-binding protein Musashi homolog 1, partial [Pongo
abelii]
Length = 302
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 60 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 119
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 120 IHFHEINNKMVECKKAQPKEVMSPT 144
>gi|348508134|ref|XP_003441610.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 3
[Oreochromis niloticus]
Length = 351
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 111 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 170
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 171 IHFHEINNKMVECKKAQPKEVMTPT 195
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + T E L+ YF +FG + + V +DP RGFGFVT+AE+ ++V ++
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQ 82
Query: 146 RSHEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 83 NRHELDSKTIDPKVAFP 99
>gi|259483749|tpe|CBF79395.1| TPA: heterogeneous nuclear ribonucleoprotein HRP1 (AFU_orthologue;
AFUA_2G06090) [Aspergillus nidulans FGSC A4]
Length = 559
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q KIFVG + QEAT +D +++F +FGR++D + D K TG RGFGFVTF E
Sbjct: 190 QEKTSKIFVGGVSQEATEQDFKQFFMQFGRVIDATLMID-KDTGRPRGFGFVTFDSEAAV 248
Query: 141 DRVSRRSHEICGQQVAIDSATP 162
+ R EI G+ + + A P
Sbjct: 249 EAALSRPLEILGKTIEVKKAQP 270
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T + L+ YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 111 KMFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK 170
Query: 147 SHEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 171 EHYLDGKIIDPKRAIPRDE 189
>gi|410922321|ref|XP_003974631.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 4
[Takifugu rubripes]
Length = 341
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPA 193
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + T E L+ YF ++G + + V +DP RGFGFVTF ++ D+V ++
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 146 RSHEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 81 TRHELDSKTIDPKVAFP 97
>gi|356547342|ref|XP_003542073.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like
[Glycine max]
Length = 353
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 5/108 (4%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG + Q T ++LR YFS +G +++ + D RGFGFVTF +E ++V
Sbjct: 129 KKIFVGGIAQFFTDDELREYFSPYGNVIECQIMLDHNTGRSRGFGFVTFDDEDSVEKVFS 188
Query: 146 --RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYG 191
+ HEI G+QV I A P ++ + +++GG+G M +G
Sbjct: 189 VGKIHEIGGKQVEIKRAEPKRSG---VDYCNTSRKSYGGFGNEMDGHG 233
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + E + E YFS++G + D + + RGFGFVTFA VAD V +
Sbjct: 41 KLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFANSAVADEVLAQ 100
Query: 147 SHEICGQQVAIDSATPLDDA 166
H I + V + P +D
Sbjct: 101 EHTIDHRVVEVKRTVPREDV 120
>gi|119618591|gb|EAW98185.1| musashi homolog 1 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 351
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPT 193
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + T E LR YF +FG + + V +DP RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 147 S-HEICGQQVAIDSATP 162
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|392465146|dbj|BAM24697.1| musashi homolog 1 [Sus scrofa]
Length = 362
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPT 193
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + T E LR YF +FG + + V +DP RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 147 S-HEICGQQVAIDSATP 162
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|440909516|gb|ELR59416.1| RNA-binding protein Musashi-like protein 1, partial [Bos grunniens
mutus]
Length = 274
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 20 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 79
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 80 IHFHEINNKMVECKKAQPKEVMSPT 104
>gi|410922315|ref|XP_003974628.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Takifugu rubripes]
Length = 348
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPA 193
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + T E L+ YF ++G + + V +DP RGFGFVTF ++ D+V ++
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 146 RSHEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 81 TRHELDSKTIDPKVAFP 97
>gi|347966814|ref|XP_321133.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|347966816|ref|XP_003435970.1| AGAP001930-PB [Anopheles gambiae str. PEST]
gi|333469887|gb|EAA00972.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|333469888|gb|EGK97443.1| AGAP001930-PB [Anopheles gambiae str. PEST]
Length = 412
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G LP T DLR +F R+G +++V + D ++ RGFGF++F E +R +
Sbjct: 109 KVFLGGLPPNITETDLRSFFCRYGTVMEVVIMYDQEKKKSRGFGFLSFENESAVERATTD 168
Query: 147 SH-EICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 195
I G+QV + A P D + N M + +G P G+M G
Sbjct: 169 HFVHISGKQVEVKKAEPRDGNQNNSNSMNTDSYQWGSPQAPPMGNGQMGG 218
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L E + E+L+RYFSR+G ++D V K+ + RGFGFVTFA+ E V +
Sbjct: 19 KLFVGGLSWETSHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERALEN 78
Query: 146 RSHEICGQQVAIDSATPLDDAGP 168
H + G+ + P P
Sbjct: 79 GPHTLDGRTIDPKPCNPRSQHKP 101
>gi|215712317|dbj|BAG94444.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 436
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG LP++ T D ++F ++G I+D + +D + RGFGF+T++ V DRV
Sbjct: 24 KIFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGFITYSNPAVVDRVMDD 83
Query: 147 SHEICGQQVAIDSATPLD 164
HE G+QV I P D
Sbjct: 84 IHEFNGKQVEIKRTIPKD 101
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
KKIFVG LPQ T +D + +F ++G ++D + +D + RGFGF+ F+ + V D
Sbjct: 111 KKIFVGGLPQALTEDDFKHFFQKYGPVVDHQIMRDHQTKRSRGFGFIVFSSDQVVD 166
>gi|162462398|ref|NP_001104824.1| hnRNPA/B-like 28 [Bombyx mori]
gi|161334098|gb|ABX60898.1| hnRNPA/B-like protein [Bombyx mori]
Length = 250
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G LP T DLR +F R+G++++V + D ++ RGFGF++F +E+ +RV++
Sbjct: 98 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEISVERVTQE 157
Query: 147 SH-EICGQQVAIDSATPLD 164
+ G+QV I A P D
Sbjct: 158 HFINLNGKQVEIKRAEPRD 176
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L E + E+L+RYFSR+G ++D V K+ + RGFGFVTFA+ + + V +
Sbjct: 8 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 67
Query: 147 S-HEICGQQVAIDSATPLDDAGPSQ----------NFMMNAAET-----FGGYGGPM--- 187
H++ G+ + P P + N ET FG YG M
Sbjct: 68 GPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVV 127
Query: 188 ------RTYGRMYGSLDFDD 201
+ R +G L F+D
Sbjct: 128 IMYDQEKKKSRGFGFLSFED 147
>gi|357447957|ref|XP_003594254.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483302|gb|AES64505.1| RNA-binding protein, putative [Medicago truncatula]
Length = 522
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 31/162 (19%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D E ++++ H + G TV +A P++D N + + +
Sbjct: 95 DPSVAERVVMEKHVIDGRTVEAKKAVPRDDQ---------------NVFTRSNSSSHGSP 139
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
APT KKIFVG L T D + YF +FG I DV V D
Sbjct: 140 APTPIRT---------------KKIFVGGLASTVTESDFKNYFDQFGTITDVVVMYDHNT 184
Query: 124 TGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLD 164
RGFGF+T+ +EE V + + HE+ G+ V + A P D
Sbjct: 185 QRPRGFGFITYDSEEAVEKVLHKTFHELNGKMVEVKRAVPKD 226
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + + LR+YF FG +++ + KD RGFGFV FA+ VA+RV
Sbjct: 46 KLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAERVVME 105
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V A P DD
Sbjct: 106 KHVIDGRTVEAKKAVPRDD 124
>gi|449447863|ref|XP_004141686.1| PREDICTED: uncharacterized protein LOC101220676 [Cucumis sativus]
gi|449525968|ref|XP_004169988.1| PREDICTED: uncharacterized LOC101220676 [Cucumis sativus]
Length = 700
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-- 143
KKIFVG +P T E+ + YFS FGRI++ + D K RGFGF+TF E + +
Sbjct: 512 KKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQIMIDYKTKRSRGFGFITFENEDSVENIFS 571
Query: 144 SRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFG 181
R HE+ G+QV I A P A +F N+ +T G
Sbjct: 572 GDRIHELGGKQVEIKKAVPKRVA---YDFNSNSGQTSG 606
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADRVSR 145
K+FVG + E T + R YFS++G I D + D K TG RGFGFVTF + +AD V +
Sbjct: 424 KLFVGGVAWETTEDTFRDYFSKYGEIADSVIMID-KHTGRPRGFGFVTFCDPAIADMVLK 482
Query: 146 RSHEICGQQVAIDSATPLDD 165
H I G+ V + P D
Sbjct: 483 IDHIIDGRAVEVKRTVPRAD 502
>gi|426374423|ref|XP_004054073.1| PREDICTED: RNA-binding protein Musashi homolog 1, partial [Gorilla
gorilla gorilla]
Length = 303
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 61 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 120
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 121 IHFHEINNKMVECKKAQPKEVMSPT 145
>gi|357145619|ref|XP_003573706.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Brachypodium
distachyon]
Length = 347
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L +E + + YF ++G I+D + KD RGFGF+TF++ + DRV
Sbjct: 15 KIFIGGLSKETSLGTFKEYFGKYGEIIDAVIMKDRYTQKPRGFGFITFSDPAIVDRVIED 74
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNF 172
+H I G+QV I P A P ++F
Sbjct: 75 NHVIDGKQVEIKRTIP-KGAAPLKDF 99
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 17/123 (13%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG L ++ + +FS+FG++++ + +D RGFGF+ F AE+ V + ++
Sbjct: 102 KKIFVGGLVSTLKDDEFKDFFSKFGKVVEHEIIRDHSTNKSRGFGFIVFDAEKTVDELLA 161
Query: 145 RRSH--EICGQQVAIDSATPLDDAGPSQNFM--------------MNAAETFGGYGGPMR 188
++ + ++ G QV I A P + P +F N++ ++GG P R
Sbjct: 162 KKGNMIDLDGTQVEIKKAEPKKPSNPPHSFDNKPRSRPHADGYDGFNSSYSYGGSLAPYR 221
Query: 189 TYG 191
+ G
Sbjct: 222 SPG 224
>gi|154799956|dbj|BAF75023.1| Musashi-1b [Cynops pyrrhogaster]
Length = 346
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCE 168
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQN 171
HEI + V A P + P+ +
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPTSS 195
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + T E LR YF ++G + + V +DP RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 147 S-HEICGQQVAIDSATP 162
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|344249205|gb|EGW05309.1| RNA-binding protein Musashi-like 1 [Cricetulus griseus]
Length = 338
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 76 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 135
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 136 IHFHEINNKMVECKKAQPKEVMSPT 160
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 100 EDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAID 158
E LR YF +FG + + V +DP RGFGFVTF ++ D+V +S HE+ + +
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60
Query: 159 SATP 162
A P
Sbjct: 61 VAFP 64
>gi|154799954|dbj|BAF75022.1| Musashi-1a [Cynops pyrrhogaster]
Length = 361
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCE 168
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQN 171
HEI + V A P + P+ +
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPTSS 195
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + T E LR YF ++G + + V +DP RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 147 S-HEICGQQVAIDSATP 162
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|34419189|dbj|BAC84953.1| RNA-binding protein Musashi-1 [Cynops pyrrhogaster]
Length = 169
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 38 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCE 97
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQN 171
HEI + V A P + P+ +
Sbjct: 98 IHFHEINNKMVECKKAQPKEVMSPTSS 124
>gi|298708562|emb|CBJ30647.1| RNA-binding protein, putative [Ectocarpus siliculosus]
Length = 462
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 21/169 (12%)
Query: 3 KDQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAAL 62
++ S + + + H + G T+ V RA P+ D P+ R +AA R +A
Sbjct: 110 QESTSADAALKEEHVIDGRTIDVKRAVPR--DRAPLPR-------------AAADRNSAN 154
Query: 63 GAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPK 122
G +G G + + KIFVG L QE D R YF++FG++ D V D K
Sbjct: 155 ARGG--SQVGGRHG-GMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKK 211
Query: 123 RTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
RGFGF+T+ + ++V +S +HE+ G+ V + +A P D GP Q
Sbjct: 212 TGRSRGFGFITYDSPDIVRKVMSGGTHELKGKSVEVKTAAPRD--GPRQ 258
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 60 AALGAPTLYDHPGSFYGRGESSQR-IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVP 118
AA GAP + E + + KIF+G L + T + L+ +F ++G + DV +
Sbjct: 34 AADGAPAVEGEKAKELSHEEQQKADVEGKIFLGGLTWQTTEDMLKTHFGKWGALNDVILM 93
Query: 119 KDPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDA 166
++ K TG RGFGFV F E AD + H I G+ + + A P D A
Sbjct: 94 RN-KITGEPRGFGFVQFQESTSADAALKEEHVIDGRTIDVKRAVPRDRA 141
>gi|405965286|gb|EKC30669.1| TAR DNA-binding protein 43 [Crassostrea gigas]
Length = 380
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
+++ + +K+FV R ++ TA+DL+ YFS++G + DV++PK R F FVTFA+ +
Sbjct: 164 AAEMVSRKVFVARCTEDITADDLKSYFSKYGEVSDVFIPKP-----FRAFAFVTFADHRI 218
Query: 140 ADRVSRRSHEICGQQVAIDSATP 162
A + H I G V + +A P
Sbjct: 219 ARSLCGEDHIIKGASVHVTTAAP 241
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE----E 137
QR I +G LP ++ +DLRRYFS +G +L V V +DPK +GFGF+ F E E
Sbjct: 104 QRCSDLIVLG-LPWKSNEDDLRRYFSTYGELLLVQVKRDPKTGASKGFGFIRFLEYDSQE 162
Query: 138 VVADRVSRR 146
A+ VSR+
Sbjct: 163 GAAEMVSRK 171
>gi|156371062|ref|XP_001628585.1| predicted protein [Nematostella vectensis]
gi|156215565|gb|EDO36522.1| predicted protein [Nematostella vectensis]
Length = 190
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-----EVVAD 141
K+FVG L +E T E LR YF +G + DV V D RGFG+VTFA+ V+ D
Sbjct: 15 KLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKD 74
Query: 142 RVSRRSHEICGQQVAIDSATPLDDAGPS 169
+V +H I G++V + A P DD +
Sbjct: 75 KVENGAHRIDGKEVEVKRAIPRDDNSAT 102
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGR----ILDVYVPKDPKRTGHRGFGFVTFA 135
+S KKIFVG LP++AT ED++ +D+ + K+ + T HRGF FV
Sbjct: 102 TSHEKTKKIFVGGLPEDATKEDIQEAIESLLEEKVDKVDLIMKKEDE-TKHRGFAFVELN 160
Query: 136 EEVVADRVS--RRSHEICGQQVAIDSATPLD 164
E AD + ++ H + G+ V ATP D
Sbjct: 161 NEDQADELCCVKKIH-VKGKMVEAKKATPRD 190
>gi|410922319|ref|XP_003974630.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 3
[Takifugu rubripes]
Length = 363
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPA 193
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + T E L+ YF ++G + + V +DP RGFGFVTF ++ D+V ++
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 146 RSHEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 81 TRHELDSKTIDPKVAFP 97
>gi|326435665|gb|EGD81235.1| RNA-binding protein Musashi-1 [Salpingoeca sp. ATCC 50818]
Length = 1023
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 83 RIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR 142
R +K+FVG LP AT E L +FS FG I + V D + RGFGFVTF E VA+
Sbjct: 523 RSARKVFVGGLPSNATDEALIGFFSNFGEIEEAVVIHDKQTRLPRGFGFVTFVSEQVAEH 582
Query: 143 -VSRRSHEICGQQVAIDSATPLDDAG---PSQNF 172
VS H++ G+ V + A P G PS+N+
Sbjct: 583 VVSLHYHDLLGKMVEVKRAEPKATDGNRSPSRNY 616
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q I K+FVG L E + L+ YFSRFG ++D V D RGFGFVTF +
Sbjct: 422 QIIPGKMFVGGLSPETNRDRLKGYFSRFGEVVDCVVMTDATTGRTRGFGFVTFRDGRCCA 481
Query: 142 RVSR-RSHEICGQQVAIDSATP 162
+V R R H I G++V A P
Sbjct: 482 KVLRERPHIIDGREVDPKMAVP 503
>gi|219362753|ref|NP_001137092.1| uncharacterized protein LOC100217268 [Zea mays]
gi|194698334|gb|ACF83251.1| unknown [Zea mays]
gi|323388723|gb|ADX60166.1| SNF2 transcription factor [Zea mays]
gi|413925208|gb|AFW65140.1| hypothetical protein ZEAMMB73_790427 [Zea mays]
Length = 383
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG LP++ T R+F ++G I+D + KD + RGFGF+T+++ V D+V
Sbjct: 26 KIFVGGLPRDTTDATFVRHFGQYGEIVDSVIMKDRHTSQPRGFGFITYSDPAVVDKVIED 85
Query: 147 SHEICGQQVAIDSATP 162
+H I G+QV I P
Sbjct: 86 NHVINGKQVEIKRTIP 101
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP T ++ + +F+R+G ++D + D + RGFGF+ FA E V D +
Sbjct: 115 KKIFVGGLPSTLTEDEFKSFFARYGTVVDHQIMFDHETKRSRGFGFIVFASEQVVDDLLA 174
Query: 146 RSH--EICGQQVAIDSATP 162
+ ++ G +V I A P
Sbjct: 175 NGNMVDLAGSKVEIKKAEP 193
>gi|281340836|gb|EFB16420.1| hypothetical protein PANDA_020894 [Ailuropoda melanoleuca]
Length = 329
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 76 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 135
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 136 IHFHEINNKMVECKKAQPKEVMSPT 160
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 100 EDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAID 158
E LR YF +FG + + V +DP RGFGFVTF ++ D+V +S HE+ + +
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60
Query: 159 SATP 162
A P
Sbjct: 61 VAFP 64
>gi|357447963|ref|XP_003594257.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483305|gb|AES64508.1| RNA-binding protein, putative [Medicago truncatula]
Length = 411
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG L T D + YF +FG I DV V D RGFGF+T+ +EE V +
Sbjct: 36 KKIFVGGLASTVTESDFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLH 95
Query: 145 RRSHEICGQQVAIDSATPLD 164
+ HE+ G+ V + A P D
Sbjct: 96 KTFHELNGKMVEVKRAVPKD 115
>gi|17137614|ref|NP_477399.1| TAR DNA-binding protein-43 homolog, isoform A [Drosophila
melanogaster]
gi|21626673|gb|AAF47080.2| TAR DNA-binding protein-43 homolog, isoform A [Drosophila
melanogaster]
Length = 332
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 13/140 (9%)
Query: 46 YGAYNAYISAAT-RYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 104
+G+Y+A + T R+ G P S G G ++ K+FVGR ++ ++DLR
Sbjct: 155 FGSYDAQMRVLTNRHLIDGRWCEVKVPNS-KGMG---HQVPCKVFVGRCTEDINSDDLRE 210
Query: 105 YFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLD 164
YFS+FG + DV++P+ R F FVTF + VA + H I G V + +A P
Sbjct: 211 YFSKFGEVTDVFIPRP-----FRAFSFVTFLDPDVAQSLCGEDHIIKGVSVHVSNAAPKA 265
Query: 165 DAGPS---QNFMMNAAETFG 181
+ + Q++ N+A +FG
Sbjct: 266 EQNRNQQVQSYNYNSANSFG 285
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 6/155 (3%)
Query: 45 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 104
G+G Y AY + + ++ + R E+ R I +G LP + T E LR
Sbjct: 68 GWGEY-AYFCVFPKENKRKSDDNLENSTAKTKRIETRLRCTDLIVLG-LPWKTTEESLRE 125
Query: 105 YFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQ--QVAIDSATP 162
YF +G +L + KD K +GFGFV F RV H I G+ +V + ++
Sbjct: 126 YFETYGEVLMAQIKKDTKSGQSKGFGFVRFGSYDAQMRVLTNRHLIDGRWCEVKVPNSKG 185
Query: 163 LDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
+ P + F+ E +R Y +G +
Sbjct: 186 MGHQVPCKVFVGRCTEDIN--SDDLREYFSKFGEV 218
>gi|4505255|ref|NP_002433.1| RNA-binding protein Musashi homolog 1 [Homo sapiens]
gi|125630689|ref|NP_001074996.1| RNA-binding protein Musashi homolog 1 [Bos taurus]
gi|296213096|ref|XP_002753122.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Callithrix
jacchus]
gi|51316193|sp|O43347.1|MSI1H_HUMAN RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|2769698|gb|AAB95636.1| similar to murine RNA-binding protein; 99% similar to D49654
(PID:g1434857) [Homo sapiens]
gi|3786320|dbj|BAA33962.1| Musashi [Homo sapiens]
gi|119618592|gb|EAW98186.1| musashi homolog 1 (Drosophila), isoform CRA_b [Homo sapiens]
gi|124358513|dbj|BAF45938.1| RNA-binding protein Musashi-1 [Bos taurus]
gi|147897997|gb|AAI40381.1| Musashi homolog 1 (Drosophila) [synthetic construct]
gi|148921740|gb|AAI46464.1| Musashi homolog 1 (Drosophila) [synthetic construct]
gi|208966796|dbj|BAG73412.1| musashi homolog 1 [synthetic construct]
Length = 362
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPT 193
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + T E LR YF +FG + + V +DP RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 147 S-HEICGQQVAIDSATP 162
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|332840634|ref|XP_003314028.1| PREDICTED: RNA-binding protein Musashi homolog 1, partial [Pan
troglodytes]
Length = 324
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 71 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 130
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 131 IHFHEINNKMVECKKAQPKEVMSPT 155
Score = 37.0 bits (84), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 109 FGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP 162
FG + + V +DP RGFGFVTF ++ D+V +S HE+ + + A P
Sbjct: 5 FGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFP 59
>gi|225438019|ref|XP_002274734.1| PREDICTED: uncharacterized protein LOC100263471 [Vitis vinifera]
Length = 441
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP T E R+YF +G + DV V D RGFGF++F E DRV
Sbjct: 110 KKIFVGGLPSTLTEEGFRQYFETYGHVTDVVVMYDQNTQRPRGFGFISFDTEDAVDRVLH 169
Query: 146 RS-HEICGQQVAIDSATPLD 164
++ H++ G+ V + A P D
Sbjct: 170 KTFHDLNGKLVEVKRALPKD 189
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG +P + T E L+ YF+++G + + +D RGFGFV FA+ V D V +
Sbjct: 7 KLFVGGIPWDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFADPSVLDAVLQE 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A ++ S+ N + G GG +T G L
Sbjct: 67 KHTIDGRTVEAKRALSREEQHTSRPGNSNTGRSSSGMGGNFKTKKIFVGGL 117
>gi|161084519|ref|NP_001097631.1| RNA-binding protein 6, isoform B [Drosophila melanogaster]
gi|158028569|gb|ABW08559.1| RNA-binding protein 6, isoform B [Drosophila melanogaster]
Length = 499
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG I D + D + HRGFGFVTF E V D+V
Sbjct: 118 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 177
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQ 170
HEI + V A P + P+
Sbjct: 178 IHFHEINNKMVECKKAQPKEVMLPAN 203
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + + E LR YF R+G I + V KDP RGFGFVTF++ D+V ++
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
Query: 146 RSHEICGQQVAIDSATP 162
+HE+ G++V A P
Sbjct: 90 GTHELDGKKVDPKVAFP 106
>gi|550458|gb|AAA68014.1| ribonucleoprotein [Gallus gallus]
gi|1095499|prf||2109229A RNA-binding protein
Length = 285
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F++F EE +V
Sbjct: 157 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFISFKEEDPVKKVLE 216
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 217 KKFHNVSGSKCEIKVAQPKE 236
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG + D + DP RGFGF F E ++V +
Sbjct: 74 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFRLFKEPGSVEKVLEQ 133
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 134 KEHRLDGRLI 143
>gi|351702220|gb|EHB05139.1| RNA-binding protein Musashi-like protein 1, partial [Heterocephalus
glaber]
Length = 329
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 76 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 135
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 136 IHFHEINNKMVECKKAQPKEVMSPT 160
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 100 EDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAID 158
E LR YF +FG + + V +DP RGFGFVTF ++ D+V +S HE+ + +
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60
Query: 159 SATP 162
A P
Sbjct: 61 VAFP 64
>gi|2582639|emb|CAA05398.1| hnRNP-like protein [Arabidopsis thaliana]
Length = 452
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP T + + YF +FG I DV V D RGFGF+TF E D V
Sbjct: 49 KKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLH 108
Query: 146 RS-HEICGQQVAIDSATP--LDDAGPSQNFMMNAAETFG 181
++ HE+ G+ V + A P L P+++ ++ +G
Sbjct: 109 KTFHELNGKMVEVKRAVPKELSSTTPNRSPLIGYGNNYG 147
>gi|426247780|ref|XP_004017654.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Ovis aries]
Length = 325
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 99 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 158
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 159 IHFHEINNKMVECKKAQPKEVMSPT 183
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 100 EDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAID 158
E LR YF +FG + + V +DP RGFGFVTF ++ D+V +S HE+ + +
Sbjct: 24 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 83
Query: 159 SATP 162
A P
Sbjct: 84 VAFP 87
>gi|334310867|ref|XP_001381121.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Monodelphis domestica]
Length = 376
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEE-VVADRVS 144
KKIFVG L EAT + +R YF FG I + +P DPK RGF F+TF EE V +
Sbjct: 181 KKIFVGGLNPEATEDKIREYFGDFGEIESIELPMDPKTNKRRGFVFITFKEEDPVKKILE 240
Query: 145 RRSHEICGQQVAIDSATP 162
++ H + G + I A P
Sbjct: 241 KKFHNVGGSKCEIKVAQP 258
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F E D+V +
Sbjct: 98 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKESASVDKVLDQ 157
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 158 KEHRLDGRVI 167
>gi|327282602|ref|XP_003226031.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Anolis carolinensis]
Length = 352
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 110 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMSPT 194
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + T E LR YF +FG + + V +DP RGFGFVTF ++ D+V +
Sbjct: 22 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVDQAGVDKVLAQ 81
Query: 147 S-HEICGQQVAIDSATP 162
S HE+ + + A P
Sbjct: 82 SRHELDSKTIDPKVAFP 98
>gi|3882097|dbj|BAA34422.1| TAR-binding protein [Drosophila melanogaster]
gi|3882130|dbj|BAA34430.1| TAR-binding protein [Drosophila melanogaster]
Length = 332
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 13/140 (9%)
Query: 46 YGAYNAYISAAT-RYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 104
+G+Y+A + T R+ G P S G G ++ K+FVGR ++ ++DLR
Sbjct: 155 FGSYDAQMRVLTNRHLIDGRWCEVKVPNS-KGMG---HQVPCKVFVGRCTEDINSDDLRE 210
Query: 105 YFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLD 164
YFS+FG + DV++P+ R F FVTF + VA + H I G V + +A P
Sbjct: 211 YFSKFGEVTDVFIPRP-----FRAFSFVTFLDPDVAQSLCGEDHIIKGVSVHVSNAAPKA 265
Query: 165 DAGPS---QNFMMNAAETFG 181
+ + Q++ N+A +FG
Sbjct: 266 EQNRNQQVQSYNYNSANSFG 285
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 6/155 (3%)
Query: 45 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 104
G+G Y AY + + ++ + R E+ R I +G LP + T E LR
Sbjct: 68 GWGEY-AYFCVFPKENKRKSDDNLENSTAKTKRIETRLRCTDLIVLG-LPWKTTEESLRE 125
Query: 105 YFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQ--QVAIDSATP 162
YF +G +L + KD K +GFGFV F RV H I G+ +V + ++
Sbjct: 126 YFETYGEVLMAQIKKDTKSGQSKGFGFVRFGSYDAQMRVLTNRHLIDGRWCEVKVPNSKG 185
Query: 163 LDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
+ P + F+ E +R Y +G +
Sbjct: 186 MGHQVPCKVFVGRCTEDIN--SDDLREYFSKFGEV 218
>gi|261488364|emb|CBH19557.1| RNA recognition motif containing protein [Oryza sativa Indica
Group]
gi|261488394|emb|CBH19572.1| RNA recognition motif containing protein [Oryza sativa Indica
Group]
Length = 125
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG LP++ T D ++F ++G I+D + +D + RGFGF+T++ V DRV
Sbjct: 24 KIFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGFITYSNPAVVDRVMDD 83
Query: 147 SHEICGQQVAIDSATPLD 164
HE G+QV I P D
Sbjct: 84 IHEFNGKQVEIKRTIPKD 101
>gi|47221330|emb|CAF97248.1| unnamed protein product [Tetraodon nigroviridis]
Length = 312
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KKIFVG L EAT E +R YF FG I ++ +P DPK RGF F+T+ EE A + +
Sbjct: 140 KKIFVGGLNPEATEETIREYFGAFGEIENIDLPLDPKSKKRRGFIFITYKEEASAKKCLE 199
Query: 145 RRSHEICGQQVAIDSATP 162
++ H + G + + A P
Sbjct: 200 KKFHTVEGSRCELKLAQP 217
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG + D + D RGFGFV F + ++V +
Sbjct: 57 KMFVGGLSWDTSKKDLKDYFTKFGDVSDCTIKFDSDSGRSRGFGFVLFKDPSSVEKVLQQ 116
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 117 KEHRLDGRLI 126
>gi|196004432|ref|XP_002112083.1| hypothetical protein TRIADDRAFT_63876 [Trichoplax adhaerens]
gi|190585982|gb|EDV26050.1| hypothetical protein TRIADDRAFT_63876 [Trichoplax adhaerens]
Length = 331
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVA 140
Q KKIF+G L E T L+ +FS FG ILDV D RGF F++F EE V
Sbjct: 160 QHRTKKIFIGGLGAEHTESSLKEFFSEFGNILDVEFVTDKLTRKRRGFCFLSFDTEEAVD 219
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDA 166
++ H + G+QV I ATP D A
Sbjct: 220 KACEKQFHVVSGRQVEIKRATPKDQA 245
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 84 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
K+F+G L E T E L++YFS+FG I+ + DP RGF FVTFA D+V
Sbjct: 71 CNNKMFIGGLNWETTEEGLQKYFSKFGTIVSSTIKNDPITHRSRGFAFVTFANPADVDKV 130
Query: 144 SRR-SHEICGQQVAIDSATPL 163
H++ + V A PL
Sbjct: 131 LESGPHQLDNRTVDPKRALPL 151
>gi|317419099|emb|CBN81137.1| RNA-binding protein Musashi homolog 1 [Dicentrarchus labrax]
Length = 362
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 111 KKIFVGGLSVNTTIEDVKHYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 170
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 171 IHFHEINNKMVECKKAQPKEVMTPT 195
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + T E L+ YF +FG + + V +DP RGFGFVT+AE+ ++V ++
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQ 82
Query: 146 RSHEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 83 NRHELDSKTIDPKVAFP 99
>gi|261488392|emb|CBH19571.1| RNA recognition motif containing protein [Oryza sativa Indica
Group]
Length = 188
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG LP++ T D ++F ++G I+D + +D + RGFGF+T++ V DRV
Sbjct: 24 KIFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGFITYSNPAVVDRVMDD 83
Query: 147 SHEICGQQVAIDSATPLD 164
HE G+QV I P D
Sbjct: 84 IHEFNGKQVEIKRTIPKD 101
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
KKIFVG LPQ +D + +F ++G ++D + +D + RGFGF+ F+ + V D
Sbjct: 111 KKIFVGGLPQAQAEDDFKHFFQKYGPVVDHQIMRDHQTKRSRGFGFIVFSSDQVVD 166
>gi|195591012|ref|XP_002085238.1| GD12423 [Drosophila simulans]
gi|194197247|gb|EDX10823.1| GD12423 [Drosophila simulans]
Length = 351
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG I D + D + HRGFGFVTF E V D+V
Sbjct: 118 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 177
Query: 146 -RSHEICGQQVAIDSATPLDDAGPSQ 170
HEI + V A P + P+
Sbjct: 178 IHFHEINNKMVECKKAQPKEVMLPAN 203
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + + E LR YF R+G I + V KDP RGFGFVTF++ D+V ++
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
Query: 146 RSHEICGQQVAIDSATP 162
+HE+ G++V A P
Sbjct: 90 GTHELDGKKVDPKVAFP 106
>gi|354472673|ref|XP_003498562.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Cricetulus griseus]
Length = 243
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF +FG I + +P DPK RGF F+T+ EE +V
Sbjct: 87 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITYKEEDPVKKVLE 146
Query: 145 RRSHEICGQQVAIDSATP 162
++ H + G + I A P
Sbjct: 147 KKFHTVSGSKCEIKVAQP 164
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
+K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V
Sbjct: 3 EKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLD 62
Query: 145 RRSHEICGQQVAIDSATPL 163
++ H + G+ + A +
Sbjct: 63 QKEHRLDGRVIDPKKAMAM 81
>gi|302142161|emb|CBI19364.3| unnamed protein product [Vitis vinifera]
Length = 377
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG L T E+ + YF RFGRI DV V D RGFGF+TF +EE V +
Sbjct: 100 KKIFVGGLSSNLTEEEFKNYFERFGRITDVVVMHDSATRRPRGFGFITFESEESVEHVMQ 159
Query: 145 RRSHEICGQQVAIDSATP 162
+E+ G++V + A P
Sbjct: 160 NNFYELNGKRVEVKRAVP 177
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV--S 144
K+FVG + T LR YFS++G +++ Y+ +D RT GFGFVTFA+ R
Sbjct: 6 KLFVGGVSGAITEGLLRDYFSKYGTVVETYIRRDSGRTPRGGFGFVTFADAASLSRALQD 65
Query: 145 RRSHEICGQQVAIDSA 160
++ H I GQ+V + A
Sbjct: 66 QQQHFIQGQRVEVKRA 81
>gi|147795790|emb|CAN67607.1| hypothetical protein VITISV_004303 [Vitis vinifera]
Length = 507
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG L T E+ + YF RFGRI DV V D RGFGF+TF +EE V +
Sbjct: 100 KKIFVGGLSSNLTEEEFKNYFERFGRITDVVVMHDSATRRPRGFGFITFESEESVEHVMQ 159
Query: 145 RRSHEICGQQVAIDSATP 162
+E+ G++V + A P
Sbjct: 160 NNFYELNGKRVEVKRAVP 177
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV--S 144
K+FVG + T LR YFS++G +++ Y+ +D RT GFGFVTFA+ R
Sbjct: 6 KLFVGGVSGAITEGLLRDYFSKYGTVVETYIRRDSGRTPRGGFGFVTFADAASLSRALQD 65
Query: 145 RRSHEICGQQVAIDSA 160
++ H I GQ+V + A
Sbjct: 66 QQQHFIQGQRVEVKRA 81
>gi|301790887|ref|XP_002930448.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Ailuropoda
melanoleuca]
Length = 360
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 107 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 166
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 167 IHFHEINNKMVECKKAQPKEVMSPT 191
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 99 AEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAI 157
E LR YF +FG + + V +DP RGFGFVTF ++ D+V +S HE+ + +
Sbjct: 31 CEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDP 90
Query: 158 DSATP 162
A P
Sbjct: 91 KVAFP 95
>gi|225458908|ref|XP_002283509.1| PREDICTED: uncharacterized protein LOC100255821 [Vitis vinifera]
Length = 471
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG L T E+ + YF RFGRI DV V D RGFGF+TF +EE V +
Sbjct: 100 KKIFVGGLSSNLTEEEFKNYFERFGRITDVVVMHDSATRRPRGFGFITFESEESVEHVMQ 159
Query: 145 RRSHEICGQQVAIDSATP 162
+E+ G++V + A P
Sbjct: 160 NNFYELNGKRVEVKRAVP 177
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV--S 144
K+FVG + T LR YFS++G +++ Y+ +D RT GFGFVTFA+ R
Sbjct: 6 KLFVGGVSGAITEGLLRDYFSKYGTVVETYIRRDSGRTPRGGFGFVTFADAASLSRALQD 65
Query: 145 RRSHEICGQQVAIDSA 160
++ H I GQ+V + A
Sbjct: 66 QQQHFIQGQRVEVKRA 81
>gi|255574661|ref|XP_002528240.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223532357|gb|EEF34155.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 456
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T D ++YF +FG I DV V D RGFGF+T+ E D+V
Sbjct: 107 KKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLH 166
Query: 146 RS-HEICGQQVAIDSATPLD-DAGPSQ 170
++ HE+ G+ V + A P + GP++
Sbjct: 167 KTFHELNGKMVEVKRAVPKELSPGPTR 193
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + + LR YF FG +++ + KD RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWDTNEDRLREYFQVFGEVMEAVIMKDRATGRARGFGFVVFADPAVAERVVME 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFM 173
H I G+ V A P +D QN +
Sbjct: 67 KHLIDGRNVEAKKAVPRED----QNIL 89
>gi|242765445|ref|XP_002340976.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces
stipitatus ATCC 10500]
gi|218724172|gb|EED23589.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces
stipitatus ATCC 10500]
Length = 544
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q KIFVG + QEAT +D +++F +FGR++D + D RGFGFVTF E +
Sbjct: 192 QEKTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVE 251
Query: 142 RVSRRSHEICGQQVAIDSATP 162
R EI G+ + + A P
Sbjct: 252 ATLSRPLEILGKSIEVKKAQP 272
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T + L+ YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 113 KMFIGGLNWETTDQSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 172
Query: 147 SHEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 173 EHYLDGKIIDPKRAIPRDE 191
>gi|451850144|gb|EMD63446.1| hypothetical protein COCSADRAFT_160854 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG + QEAT ED +F +FGR++D + D + RGFGFVTF + D R
Sbjct: 192 KIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLRG 251
Query: 147 SHEICGQQVAIDSATP 162
+I G+Q+ + A P
Sbjct: 252 PLQILGKQIEVKRAQP 267
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T + L+ YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 108 KMFIGGLNWETTEDSLKGYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVK 167
Query: 147 SHEICGQQVAIDSATPLDD 165
H + G+ + A P ++
Sbjct: 168 EHYLDGKIIDPKRAIPREE 186
>gi|345311474|ref|XP_001513207.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Ornithorhynchus anatinus]
Length = 480
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT + +R YF FG I + +P DPK RGF F+TF EE ++
Sbjct: 296 KKIFVGGLNPEATEDKIRDYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKILE 355
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 356 KKFHNVSGSKCEIKVAQPKE 375
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
+K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F E D+V
Sbjct: 212 RKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKEAASVDKVLD 271
Query: 145 RRSHEICGQQVAIDSATPL 163
++ H + G+ + A +
Sbjct: 272 QKEHRLDGRVIDPKKAMAM 290
>gi|296478518|tpg|DAA20633.1| TPA: musashi 1 [Bos taurus]
Length = 342
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPT 193
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + T E LR YF +FG + + V +DP RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 147 S-HEICGQQVAIDSATP 162
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|441641373|ref|XP_004090371.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Nomascus
leucogenys]
Length = 267
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 49 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 108
Query: 146 -RSHEICGQQVAIDSATPLDDAGP 168
HEI + V A P + P
Sbjct: 109 IHFHEINNKMVECKKAQPKEVMFP 132
>gi|410920297|ref|XP_003973620.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Takifugu rubripes]
Length = 331
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 111 KKIFVGGLSVNTTIEDVKHYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 170
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 171 IHFHEINNKMVECKKAQPKEVMTPT 195
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + T E L+ YF +FG + + V +DP RGFGFVT+ ++ ++V ++
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTDQAGVEKVLAQ 82
Query: 146 RSHEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 83 NRHELDSKTIDPKVAFP 99
>gi|432858970|ref|XP_004069029.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Oryzias
latipes]
Length = 299
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 88 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 148 IHFHEINNKMVECKKAQPKEVMTPT 172
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SRR 146
+F+G L + T E LR YF +FG + + V +DP RGFGFVT+A++ ++V ++
Sbjct: 1 MFIGGLSWQTTQEGLREYFGKFGEVKECMVMRDPVTKRSRGFGFVTYADQAGVEQVLAQN 60
Query: 147 SHEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 61 RHELDSKTIDPKVAFP 76
>gi|193575575|ref|XP_001951661.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 87F-like
[Acyrthosiphon pisum]
Length = 303
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 25/141 (17%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVS 144
+K+F+G L T + L+ +F ++G I+DV V KDP RGFGF+T+++ +V D ++
Sbjct: 18 RKLFIGGLNYTTTNDSLKEFFEKWGDIVDVVVMKDPVTKRSRGFGFITYSKASMVDDAMA 77
Query: 145 RRSHEICGQQVAIDSATPLDD---------------AGPSQNFMMNAAETFGGYGGPMRT 189
R H+I G++V A P DD +G + + E FG YG +
Sbjct: 78 NRPHKIDGREVETKRAVPRDDIDKPDIAWTVKKMFVSGIKEQAEEDLKEYFGQYGNILNI 137
Query: 190 ---------YGRMYGSLDFDD 201
+ +G ++FDD
Sbjct: 138 QIIADKETGQRKGFGFIEFDD 158
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KK+FV + ++A EDL+ YF ++G IL++ + D + +GFGF+ F + D+ V
Sbjct: 109 KKMFVSGIKEQA-EEDLKEYFGQYGNILNIQIIADKETGQRKGFGFIEFDDSDSVDKAVL 167
Query: 145 RRSHEICGQQVAIDSATPLD 164
++HE+ G ++ + A D
Sbjct: 168 IKTHEVSGSKLEVKKAVSKD 187
>gi|321475556|gb|EFX86518.1| hypothetical protein DAPPUDRAFT_44313 [Daphnia pulex]
Length = 195
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
GR + K+FVG L + +A+ LR YF ++G I+DV V KDP RGFGF+TFA
Sbjct: 13 GRSTPTDLPHNKLFVGGLSWQTSADKLREYFGQYGTIIDVQVLKDPLTQRSRGFGFITFA 72
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATP 162
E DRV + +H + G+++ ATP
Sbjct: 73 EASSVDRVLAVPAHTLDGKKIDPKHATP 100
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KK+FVG + Q+ +A++++ YF++FGR+ + + D + HRGFGFVTF E V DR+
Sbjct: 113 KKVFVGGVSQDTSADEVKAYFNQFGRVEEAVMLMDQQTKRHRGFGFVTFESEDVVDRICE 172
Query: 146 -RSHEICGQQVAIDSATP 162
H I ++V A P
Sbjct: 173 IHYHTIKNKKVECKKAQP 190
>gi|244790069|ref|NP_001156444.1| TAR DNA binding protein-like [Acyrthosiphon pisum]
gi|239792762|dbj|BAH72685.1| ACYPI004992 [Acyrthosiphon pisum]
Length = 333
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 83 RIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR 142
++ KIFVGRL ++ + DL +YFS++G I DV++PK R FGFVTF + VA
Sbjct: 187 KVPHKIFVGRLTEDISEPDLSKYFSQYGEITDVFIPKP-----FRAFGFVTFNDASVAQS 241
Query: 143 VSRRSHEICGQQVAIDSATPLDD 165
+ H + G + I A P D
Sbjct: 242 LCDEDHIVKGVSLHISEANPKSD 264
>gi|410920299|ref|XP_003973621.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Takifugu rubripes]
Length = 350
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 111 KKIFVGGLSVNTTIEDVKHYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 170
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 171 IHFHEINNKMVECKKAQPKEVMTPT 195
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + T E L+ YF +FG + + V +DP RGFGFVT+ ++ ++V ++
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTDQAGVEKVLAQ 82
Query: 146 RSHEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 83 NRHELDSKTIDPKVAFP 99
>gi|347970001|ref|XP_309663.5| AGAP003497-PA [Anopheles gambiae str. PEST]
gi|333466662|gb|EAA05403.6| AGAP003497-PA [Anopheles gambiae str. PEST]
Length = 569
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
+ ++ ++ KIF+GRL ++ ++D+R YFS++G + DV++PK R F FVTF +
Sbjct: 192 KDQTQHQMPSKIFLGRLTEDINSDDIRDYFSKYGEVTDVFIPKP-----FRAFAFVTFID 246
Query: 137 EVVADRVSRRSHEICGQQVAIDSATPLDDAG 167
VA + H I G V + +A+P + G
Sbjct: 247 PHVAQSLCGEDHLIKGTSVYVSTASPRPEHG 277
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 32/59 (54%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
R ES R + V LP + T E LR YF FG +L V + KD K +G+GF+ FA
Sbjct: 106 RIESRNRTTTDLIVLGLPWKTTEESLREYFETFGELLVVQIKKDSKTGQSKGYGFIRFA 164
>gi|380806927|gb|AFE75339.1| RNA-binding protein Musashi homolog 1, partial [Macaca mulatta]
Length = 216
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 65 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 124
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 125 IHFHEINNKMVECKKAQPKEVMSPT 149
>gi|116787926|gb|ABK24693.1| unknown [Picea sitchensis]
Length = 476
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP T ED + YF +FG I DV V D RGFGF++F E + V +
Sbjct: 110 KKIFVGGLPANLTEEDFKNYFQQFGNITDVVVMYDHNTQRPRGFGFISFDSEDAVESVLQ 169
Query: 146 RS-HEICGQQVAIDSATPLD 164
+S H++ + V + A P D
Sbjct: 170 KSFHQLNEKLVEVKRALPKD 189
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G + E + E LR YFS++G ++ + KD RGFGFV F++ + D +
Sbjct: 7 KIFIGGISWETSEERLRDYFSKYGEVVQTVIMKDRLTGRARGFGFVVFSDPSIVDIALQE 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P + ++ N ++ G GG +RT G L
Sbjct: 67 KHTIDGRAVEAKKAVPRSEQQNTRTNSYNNNDSQGYGGGSVRTKKIFVGGL 117
>gi|149063557|gb|EDM13880.1| rCG21724, isoform CRA_a [Rattus norvegicus]
Length = 311
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 58 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 117
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 118 IHFHEINNKMVECKKAQPKEVMSPT 142
>gi|22507308|ref|NP_683688.1| RNA-binding protein Musashi homolog 1 [Rattus norvegicus]
gi|51316134|sp|Q8K3P4.1|MSI1H_RAT RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|22073952|gb|AAK94485.1| RNA-binding protein Musashi-1 [Rattus norvegicus]
Length = 362
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 109 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPT 193
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + T E LR YF +FG + + V +DP RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 147 S-HEICGQQVAIDSATP 162
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|6678940|ref|NP_032655.1| RNA-binding protein Musashi homolog 1 [Mus musculus]
gi|51316207|sp|Q61474.1|MSI1H_MOUSE RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|1434857|dbj|BAA08530.1| RNA-binding protein [Mus musculus]
gi|147897761|gb|AAI40423.1| Musashi homolog 1(Drosophila) [synthetic construct]
gi|148921876|gb|AAI46539.1| Musashi homolog 1(Drosophila) [synthetic construct]
Length = 362
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 109 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPT 193
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + T E LR YF +FG + + V +DP RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 147 S-HEICGQQVAIDSATP 162
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|313231345|emb|CBY08460.1| unnamed protein product [Oikopleura dioica]
Length = 216
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG L DL YFS++G++ + + D + HRGFGFVTF +E+ V + V
Sbjct: 14 KKIFVGGLSASTVQADLTAYFSKYGKVEEAMLMFDRQTNRHRGFGFVTFDSEDAVENVVE 73
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQ 170
HEI + V A P D P+Q
Sbjct: 74 IHYHEINNKTVECKKAQPKDVMMPNQ 99
>gi|224129796|ref|XP_002320673.1| predicted protein [Populus trichocarpa]
gi|222861446|gb|EEE98988.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 70/155 (45%), Gaps = 19/155 (12%)
Query: 12 MVDTHELGGSTVVVDRATPKEDDFRPV-GRMSHGGYGAYNAYISAATRYAALGAPTLYDH 70
+ D+H + G TV V +A PK + + R HG A+ G+ D+
Sbjct: 64 LQDSHVICGRTVEVKKAIPKTEKHQEHRQRHPHGN-----------QETASNGSGMNSDN 112
Query: 71 PGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFG 130
G + KKIFVG L T E R YF +FGR +D V +D R FG
Sbjct: 113 -----STGNVNYYRTKKIFVGGLSSSLTDEQFRNYFEKFGRTVDAIVMQDSSNKP-RSFG 166
Query: 131 FVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD 164
FVTF E A +V R S HE+ G+ V + A P D
Sbjct: 167 FVTFDSEESAAKVMRNSFHELNGKTVEVKKAVPKD 201
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVG +P+ + + LR +FS++G + + V KD RGF FV F+E A R +
Sbjct: 6 RKLFVGGIPRGTSEDTLRDHFSKYGVVSHLLVAKDQITKLPRGFAFVVFSEAASAARALQ 65
Query: 146 RSHEICGQQVAIDSATP 162
SH ICG+ V + A P
Sbjct: 66 DSHVICGRTVEVKKAIP 82
>gi|194386398|dbj|BAG59763.1| unnamed protein product [Homo sapiens]
Length = 267
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 49 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 108
Query: 146 -RSHEICGQQVAIDSATPLDDAGP 168
HEI + V A P + P
Sbjct: 109 IHFHEINNKMVECKKAQPKEVMFP 132
>gi|427777107|gb|JAA54005.1| Putative heteroproteinous nuclear ribonucleoprotein at 27c
[Rhipicephalus pulchellus]
Length = 322
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG LP T DL +FS +G++ +V + D ++ RGFGFV+F E+ V SR
Sbjct: 116 KIFVGGLPATVTETDLHAFFSEYGKVTEVLIMYDQEQRRSRGFGFVSFETEDAVNQLTSR 175
Query: 146 RSHEICGQQVAIDSATPLDD 165
R EI G+QV A P +
Sbjct: 176 RYVEISGKQVECKRAEPKES 195
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILD-VYVPKDPKRTGHRGFGFVTFAE-EVVADRVS 144
KIFVG L E T E L YFSRFG ++D V + + R+ RGFGFVTF + VA ++
Sbjct: 11 KIFVGGLSWETTQESLLNYFSRFGEVVDSVVMCNETGRS--RGFGFVTFRDPSCVATVLA 68
Query: 145 RRSHEICGQQVAIDSATP 162
H++ G+ V S P
Sbjct: 69 GGPHQLDGRTVDPKSCNP 86
>gi|297676866|ref|XP_002816343.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pongo
abelii]
Length = 259
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 83 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 142
Query: 145 RRSHEICGQQVAI 157
++ H I G ++ +
Sbjct: 143 KKFHTISGSKIKV 155
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SRR 146
+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V ++
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 147 SHEICGQQVAIDSATPL 163
H + G+ + A +
Sbjct: 61 EHRLDGRVIDPKKAMAM 77
>gi|67900918|ref|XP_680715.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
gi|40742836|gb|EAA62026.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
Length = 448
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q KIFVG + QEAT +D +++F +FGR++D + D K TG RGFGFVTF E
Sbjct: 79 QEKTSKIFVGGVSQEATEQDFKQFFMQFGRVIDATLMID-KDTGRPRGFGFVTFDSEAAV 137
Query: 141 DRVSRRSHEICGQQVAIDSATP 162
+ R EI G+ + + A P
Sbjct: 138 EAALSRPLEILGKTIEVKKAQP 159
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+F+G L E T + L+ YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 148 HEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|397525478|ref|XP_003832693.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Pan paniscus]
Length = 424
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 182 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 241
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 242 IHFHEINNKMVECKKAQPKEVMSPT 266
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 100 EDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAID 158
E LR YF +FG + + V +DP RGFGFVTF ++ D+V +S HE+ + +
Sbjct: 107 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 166
Query: 159 SATP 162
A P
Sbjct: 167 VAFP 170
>gi|406860631|gb|EKD13688.1| hypothetical protein MBM_07889 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 453
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG + QEAT +D + YF +FGR++D + D RGFGFVTF E D
Sbjct: 84 KIFVGGVSQEATEQDFKEYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVDACLDS 143
Query: 147 SHEICGQQVAIDSATP 162
EI G+ + + A P
Sbjct: 144 PLEILGKPIEVKKAQP 159
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+F+G L E T + L+ YFS+FG +L+ V +D RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVKE 60
Query: 148 HEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|47217577|emb|CAG02504.1| unnamed protein product [Tetraodon nigroviridis]
Length = 333
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 71 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 130
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 131 IHFHEINNKMVECKKAQPKEVMSPA 155
>gi|148687912|gb|EDL19859.1| Musashi homolog 1(Drosophila) [Mus musculus]
Length = 280
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 76 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 135
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 136 IHFHEINNKMVECKKAQPKEVMSPT 160
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 100 EDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAID 158
E LR YF +FG + + V +DP RGFGFVTF ++ D+V +S HE+ + +
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60
Query: 159 SATP 162
A P
Sbjct: 61 VAFP 64
>gi|389616410|gb|AFK91569.1| squid, partial [Drosophila madeirensis]
gi|389616412|gb|AFK91570.1| squid, partial [Drosophila subobscura]
gi|389616414|gb|AFK91571.1| squid, partial [Drosophila subobscura]
gi|389616416|gb|AFK91572.1| squid, partial [Drosophila subobscura]
gi|389616418|gb|AFK91573.1| squid, partial [Drosophila subobscura]
gi|389616420|gb|AFK91574.1| squid, partial [Drosophila subobscura]
gi|389616422|gb|AFK91575.1| squid, partial [Drosophila subobscura]
gi|389616424|gb|AFK91576.1| squid, partial [Drosophila subobscura]
gi|389616426|gb|AFK91577.1| squid, partial [Drosophila subobscura]
gi|389616428|gb|AFK91578.1| squid, partial [Drosophila subobscura]
gi|389616430|gb|AFK91579.1| squid, partial [Drosophila subobscura]
gi|389616432|gb|AFK91580.1| squid, partial [Drosophila subobscura]
gi|389616434|gb|AFK91581.1| squid, partial [Drosophila subobscura]
gi|389616436|gb|AFK91582.1| squid, partial [Drosophila subobscura]
gi|389616438|gb|AFK91583.1| squid, partial [Drosophila subobscura]
gi|389616440|gb|AFK91584.1| squid, partial [Drosophila subobscura]
gi|389616442|gb|AFK91585.1| squid, partial [Drosophila subobscura]
gi|389616444|gb|AFK91586.1| squid, partial [Drosophila subobscura]
gi|389616446|gb|AFK91587.1| squid, partial [Drosophila subobscura]
gi|389616448|gb|AFK91588.1| squid, partial [Drosophila subobscura]
gi|389616450|gb|AFK91589.1| squid, partial [Drosophila subobscura]
gi|389616452|gb|AFK91590.1| squid, partial [Drosophila subobscura]
gi|389616454|gb|AFK91591.1| squid, partial [Drosophila subobscura]
gi|389616456|gb|AFK91592.1| squid, partial [Drosophila subobscura]
gi|389616458|gb|AFK91593.1| squid, partial [Drosophila subobscura]
gi|389616460|gb|AFK91594.1| squid, partial [Drosophila subobscura]
gi|389616462|gb|AFK91595.1| squid, partial [Drosophila subobscura]
gi|389616464|gb|AFK91596.1| squid, partial [Drosophila subobscura]
gi|389616466|gb|AFK91597.1| squid, partial [Drosophila subobscura]
gi|389616468|gb|AFK91598.1| squid, partial [Drosophila subobscura]
gi|389616470|gb|AFK91599.1| squid, partial [Drosophila subobscura]
gi|389616472|gb|AFK91600.1| squid, partial [Drosophila subobscura]
gi|389616474|gb|AFK91601.1| squid, partial [Drosophila subobscura]
gi|389616476|gb|AFK91602.1| squid, partial [Drosophila subobscura]
Length = 161
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E+++ YF +FG I++V +P D +++ +GF F+TF +E+VV D +
Sbjct: 51 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 110
Query: 146 RSHEICGQQVAIDSATP 162
+I G++V + ATP
Sbjct: 111 PKQKISGKEVDVKRATP 127
>gi|317419098|emb|CBN81136.1| RNA-binding protein Musashi homolog 1 [Dicentrarchus labrax]
Length = 369
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 115 KKIFVGGLSVNTTIEDVKHYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 174
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 175 IHFHEINNKMVECKKAQPKEVMTPT 199
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGF-VTFAEEVVADRVSR 145
K+F+G L + T E L+ YF +FG + + V +DP RGFGF VT + + R
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFYVTLVDALGHVRFVI 82
Query: 146 RSHEI 150
RS +
Sbjct: 83 RSRAL 87
>gi|268553541|ref|XP_002634757.1| C. briggsae CBR-HRP-1 protein [Caenorhabditis briggsae]
Length = 337
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+KIFVG L T + +R ++S+FG I D+ V +DP RGFGFVTF + D +
Sbjct: 15 RKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFTAKTEVDAAMK 74
Query: 146 RSHEICGQQVAIDSATPLDDAGPSQN 171
+ H I G+ V A P DD S++
Sbjct: 75 QPHVIDGKTVDPKRAVPRDDKNRSES 100
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
K+++V + ++ T E L YFS++G + + D RGFGFVT + V V +
Sbjct: 105 KRLYVSGVREDHTEEMLSDYFSKYGTVTKSEIILDKATQKPRGFGFVTDDHDCVDQCVLQ 164
Query: 146 RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG 182
+SH + G + + D+ +Q M ET GG
Sbjct: 165 KSHMVNGHRCDVRKGLSKDEMSKAQ--MSRDRETRGG 199
>gi|224126191|ref|XP_002329613.1| predicted protein [Populus trichocarpa]
gi|222870352|gb|EEF07483.1| predicted protein [Populus trichocarpa]
Length = 166
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + E T E YFS++G ++D + D RGFGFVTFA+ VVADRV
Sbjct: 1 KLFVGGVSWETTEETFTNYFSKYGEVMDSVIMTDRHSGRPRGFGFVTFADPVVADRVLEE 60
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V + P +D
Sbjct: 61 DHVIDGRAVEVKRTVPRED 79
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG +P T ++L+ YFS +G I+D + D K RGFGFVTF E +R+
Sbjct: 88 KKIFVGGIPPSLTEDELKEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDSEDAVERIFS 147
Query: 146 --RSHEICGQQVAIDSA 160
R+HE+ G+QV SA
Sbjct: 148 EGRTHELGGKQVGYSSA 164
>gi|149063558|gb|EDM13881.1| rCG21724, isoform CRA_b [Rattus norvegicus]
Length = 262
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 58 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 117
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 118 IHFHEINNKMVECKKAQPKEVMSPT 142
>gi|357631285|gb|EHJ78874.1| TAR DNA binding protein-like protein [Danaus plexippus]
Length = 305
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR + TA+DLR YF FG++ DV+VPK R F FVTF + VA +
Sbjct: 176 RKVFVGRCTESLTADDLREYFGAFGQVTDVFVPKP-----FRAFSFVTFLDPEVAQSLCG 230
Query: 146 RSHEICGQQVAIDSATP 162
+ H I G V I +A+P
Sbjct: 231 QDHVIKGVSVNISTASP 247
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 83 RIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR 142
R I +G LP + E +R YFS FG +L V V +D K +GFGF+ FAE R
Sbjct: 89 RCSDLIVLG-LPWKTGEETVREYFSTFGDLLMVQVKRDTKTGLSKGFGFIKFAEYDAQLR 147
Query: 143 VSRRSHEICGQQVAI 157
R H I G+ +
Sbjct: 148 ALGRRHMIDGRWCDV 162
>gi|344246933|gb|EGW03037.1| Heterogeneous nuclear ribonucleoprotein A/B [Cricetulus griseus]
Length = 211
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF +FG I + +P DPK RGF F+T+ EE +V
Sbjct: 83 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITYKEEDPVKKVLE 142
Query: 145 RRSHEICGQQVAIDSATP 162
++ H + G + I A P
Sbjct: 143 KKFHTVSGSKCEIKVAQP 160
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SRR 146
+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V ++
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQK 60
Query: 147 SHEICGQQV 155
H + G+ +
Sbjct: 61 EHRLDGRVI 69
>gi|357462485|ref|XP_003601524.1| RNA-binding protein [Medicago truncatula]
gi|355490572|gb|AES71775.1| RNA-binding protein [Medicago truncatula]
Length = 370
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L ++ T E+ +YF R+G I D + KD RGFGF+T+A+ V D+V +
Sbjct: 19 KIFIGGLAKDTTLEEFVKYFERYGEITDSVIMKDRHTGRPRGFGFITYADASVVDQVIQE 78
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG 182
+H I +QV I P G SQ + F G
Sbjct: 79 NHIINDKQVEIKRTIP---KGASQTNDFKTKKIFVG 111
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
KKIFVG +P + ++L+ +FS+ G +++ + +D RGFGFV F + D +
Sbjct: 106 KKIFVGGIPATVSEDELKIFFSKHGNVVEHEIIRDHTTKRSRGFGFVVFDSDKAVDNL 163
>gi|395505200|ref|XP_003756932.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Sarcophilus
harrisii]
Length = 278
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEE-VVADRVS 144
KKIFVG L EAT + +R YF FG I + +P DPK RGF F+TF EE V +
Sbjct: 83 KKIFVGGLNPEATEDKIREYFGDFGEIESIELPMDPKTNKRRGFVFITFKEEDPVKKILE 142
Query: 145 RRSHEICGQQVAIDSATP 162
++ H + G + I A P
Sbjct: 143 KKFHNVGGSKCEIKVAQP 160
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SRR 146
+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F E D+V ++
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKESASVDKVLDQK 60
Query: 147 SHEICGQQVAIDSATPL 163
H + G+ + A +
Sbjct: 61 EHRLDGRVIDPKKAMAM 77
>gi|121715226|ref|XP_001275222.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus clavatus
NRRL 1]
gi|119403379|gb|EAW13796.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus clavatus
NRRL 1]
Length = 466
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q KIFVG + QEAT ++ + +F +FGR++D + D K TG RGFGFVTF E
Sbjct: 79 QEKTSKIFVGGVSQEATEQEFKGFFMQFGRVVDATLMID-KDTGRPRGFGFVTFDSEAAV 137
Query: 141 DRVSRRSHEICGQQVAIDSATP 162
+ R ICG+ + + A P
Sbjct: 138 ENALSRPLAICGKPIEVKKAQP 159
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+F+G L E T + L+ YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 148 HEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|112983234|ref|NP_001037606.1| TAR DNA binding protein homolog [Bombyx mori]
gi|95115208|gb|ABF55970.1| TBPH [Bombyx mori]
Length = 286
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR + TAEDLR YF FG++ DV+VP+ R F FVTF + VA +
Sbjct: 173 RKVFVGRCTENITAEDLREYFGSFGQVTDVFVPRP-----FRAFSFVTFLDPEVARSLCG 227
Query: 146 RSHEICGQQVAIDSATP 162
+ H I G V I +A+P
Sbjct: 228 QDHIIKGVSVNISTASP 244
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 83 RIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR 142
R I +G LP + T E +R YFS FG +L V V +D + +GFGF+ FAE R
Sbjct: 86 RCSDLIVLG-LPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLR 144
Query: 143 VSRRSHEICGQQVAI 157
R H I G+ +
Sbjct: 145 ALGRRHMIDGRWCDV 159
>gi|221220742|gb|ACM09032.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 336
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KKIFVG L EAT E +R YF FG I + +P D K RGF F+TF EE + +
Sbjct: 166 KKIFVGGLNPEATEETIREYFGTFGEIESIELPVDLKFKKRRGFIFITFKEEATVKKCLE 225
Query: 145 RRSHEICGQQVA 156
++ H +CG +V
Sbjct: 226 KKFHNVCGTKVT 237
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YFS+FG + D + D RGFGF+ F E D+V +
Sbjct: 83 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDSNTGRSRGFGFILFKEAGSVDKVLEQ 142
Query: 146 RSHEICGQQV 155
+ H + G+Q+
Sbjct: 143 KEHRLDGRQI 152
>gi|350592544|ref|XP_003359176.2| PREDICTED: RNA-binding protein Musashi homolog 1-like, partial [Sus
scrofa]
Length = 411
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 158 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 217
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 218 IHFHEINNKMVECKKAQPKEVMSPT 242
Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F R + LR YF +FG + V +DP RGFGFVTF ++ D+V +
Sbjct: 70 KLFPVRPSASWGPQGLREYFGQFGEEKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 129
Query: 147 S-HEICGQQVAIDSATP 162
S HE+ + + A P
Sbjct: 130 SRHELDSKTIDPKVAFP 146
>gi|66358802|ref|XP_626579.1| RRM domain containing protein [Cryptosporidium parvum Iowa II]
gi|46228014|gb|EAK88934.1| RRM domain containing protein [Cryptosporidium parvum Iowa II]
Length = 199
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 78 GESSQRI---GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF 134
GE+SQ +KIFVG LP + + LR+YF +FG+I D + D K RGFGFVTF
Sbjct: 74 GENSQGTMFRTEKIFVGNLPTTCSQDILRKYFEQFGQISDCVMMCDKKSGIGRGFGFVTF 133
Query: 135 AEEVVADRVSRR--SHEICGQQVAIDSATP 162
V D + R H I GQ V + A+P
Sbjct: 134 TSTSVVDEIIRAYDEHYIDGQWVEVKRASP 163
>gi|444723183|gb|ELW63844.1| RNA-binding protein Musashi like protein 1 [Tupaia chinensis]
Length = 324
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T +D+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 103 KKIFVGGLSVNTTVDDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 162
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 163 IHFHEINNKMVECKKAQPKEVMSPT 187
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 102 LRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSA 160
LR YF +FG + + V +DP RGFGFVTF ++ D+V +S HE+ + + A
Sbjct: 30 LREYFGQFGHVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVA 89
Query: 161 TP 162
P
Sbjct: 90 FP 91
>gi|125527839|gb|EAY75953.1| hypothetical protein OsI_03870 [Oryza sativa Indica Group]
Length = 312
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA-EEVVADRVS 144
+KIFVG LP AT + L+ YFS+FG + V D RGFGF+ FA EE A +
Sbjct: 124 RKIFVGGLPVSATEKKLKEYFSKFGEVNHAIVVTDLNTKMPRGFGFIQFASEESTARALK 183
Query: 145 RRSHEICGQQVAIDSATP 162
+ H +CGQ V + A P
Sbjct: 184 KDRHFLCGQWVEVSLAMP 201
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
K+FVG +P + +LR +FSRFG + V PK+ + RGF FV F
Sbjct: 30 KVFVGGVPLGTSESELRAHFSRFGTVAFVGAPKNKQTGAARGFAFVQFVN 79
>gi|31417000|gb|AAH17560.1| MSI2 protein [Homo sapiens]
gi|119614914|gb|EAW94508.1| musashi homolog 2 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 151
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 6 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 65
Query: 146 -RSHEICGQQVAIDSATPLDDAGP 168
HEI + V A P + P
Sbjct: 66 IHFHEINNKMVECKKAQPKEVMFP 89
>gi|340730010|ref|XP_003403285.1| PREDICTED: DAZ-associated protein 1-like [Bombus terrestris]
Length = 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R + + R KKIFVG + Q+ ++++++ YF++FG++ + + D + HRGFGFVTF
Sbjct: 141 RAKQANRT-KKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFEN 199
Query: 137 EVVADRVSR-RSHEICGQQVAIDSATPLDDAGP 168
E V DRV H I ++V A P + P
Sbjct: 200 EDVVDRVCEIHFHTIKNKKVECKKAQPKEAVQP 232
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + ++E LR YF FG + DV + KDP RGFGF+TFAE D+V +
Sbjct: 62 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 121
Query: 147 S-HEICGQQVAIDSATPLDDA 166
H + G+++ ATP + A
Sbjct: 122 PIHTLDGKKIDPKHATPKNRA 142
>gi|2244786|emb|CAB10209.1| ribonucleoprotein like protein [Arabidopsis thaliana]
gi|7268135|emb|CAB78472.1| ribonucleoprotein like protein [Arabidopsis thaliana]
Length = 406
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP T E+ R+YF +G + DV + D RGFGFV+F E D V
Sbjct: 105 KKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLH 164
Query: 146 RS-HEICGQQVAIDSATPLD 164
++ H++ G+QV + A P D
Sbjct: 165 KTFHDLSGKQVEVKRALPKD 184
>gi|22328624|ref|NP_193166.2| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|18152698|emb|CAC83517.1| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|110740752|dbj|BAE98475.1| ribonucleoprotein like protein [Arabidopsis thaliana]
gi|332658011|gb|AEE83411.1| ribonucleoprotein 1 [Arabidopsis thaliana]
Length = 411
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP T E+ R+YF +G + DV + D RGFGFV+F E D V
Sbjct: 110 KKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLH 169
Query: 146 RS-HEICGQQVAIDSATPLD 164
++ H++ G+QV + A P D
Sbjct: 170 KTFHDLSGKQVEVKRALPKD 189
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADRVSR 145
K+FVG + E + LR +F+ +G + V +D K TG RGFGFV F++ V DRV +
Sbjct: 7 KLFVGGISWETDEDKLREHFTNYGEVSQAIVMRD-KLTGRPRGFGFVIFSDPSVLDRVLQ 65
Query: 146 RSHEICGQQVAIDSA 160
H I ++V + A
Sbjct: 66 EKHSIDTREVDVKRA 80
>gi|158523286|sp|Q99729.2|ROAA_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A/B;
Short=hnRNP A/B; AltName: Full=APOBEC1-binding protein
1; Short=ABBP-1
Length = 332
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 86 KKIFVGRL-PQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV- 143
KKIFVG L P+ T E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 153 KKIFVGGLNPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVL 212
Query: 144 SRRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 213 EKKFHTVSGSKCEIKVAQPKE 233
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 70 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 129
Query: 146 RSHEICGQQVAIDSATPL 163
+ H + G+ + A +
Sbjct: 130 KEHRLDGRVIDPKKAMAM 147
>gi|392351488|ref|XP_340877.5| PREDICTED: RNA-binding protein Musashi homolog 2-like [Rattus
norvegicus]
Length = 463
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 227 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 286
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 287 IHFHEINNKMVECKKAQP 304
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 94 PQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSH 148
P + A+ LR YFS+FG I + V +DP RGFGFVTFA+ D+V + H
Sbjct: 146 PSDVPADSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPH 200
>gi|212528804|ref|XP_002144559.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
gi|210073957|gb|EEA28044.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
Length = 454
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q KIFVG + QEAT +D +++F +FGR++D + D RGFGFVTF E +
Sbjct: 106 QEKTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVE 165
Query: 142 RVSRRSHEICGQQVAIDSATP 162
R EI G+ + + A P
Sbjct: 166 ATLSRPLEILGKSIEVKKAQP 186
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T + L+ YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 27 KMFIGGLNWETTDQSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 86
Query: 147 SHEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 87 EHYLDGKIIDPKRAIPRDE 105
>gi|148683903|gb|EDL15850.1| Musashi homolog 2 (Drosophila), isoform CRA_e [Mus musculus]
gi|149053820|gb|EDM05637.1| similar to RNA-binding protein Musashi2-S (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 224
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 6 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 65
Query: 146 -RSHEICGQQVAIDSATPLD 164
HEI + V A P +
Sbjct: 66 IHFHEINNKMVECKKAQPKE 85
>gi|332028567|gb|EGI68604.1| RNA-binding protein squid [Acromyrmex echinatior]
Length = 316
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + +D++ +FS+FG I++V +P D + +GF F+TF +E+VV + +
Sbjct: 125 KIFVGGLSTELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 184
Query: 146 RSHEICGQQVAIDSATP 162
I G++V + ATP
Sbjct: 185 SKQTINGKEVDVKKATP 201
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
+K+FVG L E T ++LR +FS +G I + V DP RGF F+ FA+ D++ S
Sbjct: 44 RKLFVGGLSWETTDKELREHFSAYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMS 103
Query: 145 RRSHEICGQQV 155
H I ++V
Sbjct: 104 AGDHVINNKKV 114
>gi|440913641|gb|ELR63062.1| RNA-binding protein Musashi-like protein 2, partial [Bos grunniens
mutus]
Length = 225
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 7 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 66
Query: 146 -RSHEICGQQVAIDSATPLD 164
HEI + V A P +
Sbjct: 67 IHFHEINNKMVECKKAQPKE 86
>gi|47551207|ref|NP_999784.1| stage specific activator protein [Strongylocentrotus purpuratus]
gi|4071008|gb|AAC98546.1| stage specific activator protein [Strongylocentrotus purpuratus]
Length = 382
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 80 SSQRIG------KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVT 133
S +R+G KK+FVG + Q+AT EDL F G + DV++ D HRGFGFVT
Sbjct: 87 SEKRMGPGDQRTKKVFVGGISQQATKEDLYELFRSHGNVEDVHIMNDTDTGKHRGFGFVT 146
Query: 134 FAEEVVADRVSRRSH-EICGQQVAIDSATP 162
E +++ R H E+ G+ + I A P
Sbjct: 147 LDSEEAVEKLVRMHHLELKGKSMEIKKAQP 176
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTG-HRGFGFVTFAEEVVADRVS- 144
KIFVG + + A+ R YF +FG++ D+ + D + G ++GFGFVTFA+ D V+
Sbjct: 7 KIFVGGVDRNTHADTFRAYFEKFGKLSDIILMMDKDKPGQNKGFGFVTFADPACVDDVTN 66
Query: 145 RRSHEICGQ 153
++H + G+
Sbjct: 67 EKNHNLEGK 75
>gi|225447494|ref|XP_002267309.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Vitis
vinifera]
Length = 360
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG L +E + +YF ++G I D V KD + RGFGF+T+A+ V D V +
Sbjct: 19 KIFVGGLAKETNLDTFTKYFEKYGEITDSVVMKDRQTGRPRGFGFITYADPSVVDEVIQE 78
Query: 147 SHEICGQQVAIDSATP 162
+H I G+QV I P
Sbjct: 79 THIINGKQVEIKRTIP 94
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G +S+ +KIFVG + + ++ + +FS++G++++ + D RGFGF+ F
Sbjct: 96 GSSQSNDFKTRKIFVGGILTSVSEDEFKNFFSKYGKVVEHEIIHDHVTKRSRGFGFIVFD 155
Query: 136 EEVVADRVSRRSHEI--CGQQVAIDSATP 162
E V D + + I G QV I A P
Sbjct: 156 NEQVVDDLLTNGNMIDMEGTQVEIKKAEP 184
>gi|119614912|gb|EAW94506.1| musashi homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 346
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATPLD 164
HEI + V A P +
Sbjct: 170 IHFHEINNKMVECKKAQPKE 189
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G SQ K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA
Sbjct: 11 GSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATP 162
+ D+V + HE+ + + A P
Sbjct: 71 DPASVDKVLGQPHHELDSKTIDPKVAFP 98
>gi|255070081|ref|XP_002507122.1| RNA recognition motif family protein [Micromonas sp. RCC299]
gi|226522397|gb|ACO68380.1| RNA recognition motif family protein [Micromonas sp. RCC299]
Length = 234
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV- 143
G KIFVG L + +R +F +FG +++V V +DP RGFGF+TF + A +V
Sbjct: 13 GSKIFVGGLDRSVDEGVVRSFFQQFGPVVEVLVMRDPHNHQSRGFGFITFQRDESAKQVL 72
Query: 144 SRRSHEICGQQVAIDSATPLDDAGPSQ 170
R H++ G++V + SA P A P Q
Sbjct: 73 QNRYHDMMGKRVEVKSAVPRGQAPPPQ 99
>gi|226507640|ref|NP_001146692.1| uncharacterized protein LOC100280293 [Zea mays]
gi|219888359|gb|ACL54554.1| unknown [Zea mays]
gi|413934065|gb|AFW68616.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934066|gb|AFW68617.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934067|gb|AFW68618.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
Length = 453
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP T + R+YF FG + DV V D RGFGF+TF E DRV +
Sbjct: 118 KKIFVGGLPSTLTEDGFRQYFETFGIVTDVVVMYDQNTQRPRGFGFITFDSEDAVDRVLQ 177
Query: 146 RS-HEICGQQVAIDSATP 162
++ H++ G+ V + A P
Sbjct: 178 KTFHDLGGKLVEVKRALP 195
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + E T E L +FS +G + V +D RGFGFV FA+ DR +
Sbjct: 7 KLFIGGISWETTEEKLSEHFSAYGEVTQAAVMRDKITGRPRGFGFVVFADPAAVDRALQD 66
Query: 147 SHEICGQQVAIDSA 160
H + G+ V + A
Sbjct: 67 PHTLDGRTVDVKRA 80
>gi|356513961|ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max]
Length = 2304
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 75 YGRGESSQRIG---KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGF 131
Y + E +RI KIF+G L +E T ++F ++G I D + KD K RGFGF
Sbjct: 1962 YYKREGRRRINPQNTKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGF 2021
Query: 132 VTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNF 172
+T+A+ V D+V H I G+QV I P G S++F
Sbjct: 2022 ITYADPSVVDKVIEDPHIINGKQVEIKRTIPRGAVG-SKDF 2061
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG +P T ++ R +F+R+G + D + +D RGFGF+TF +EE V D +S
Sbjct: 2064 KKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFDSEEAVDDLLS 2123
Query: 145 RRSH-EICGQQVAIDSATP 162
+ + G QV I A P
Sbjct: 2124 MGNKIDFAGSQVEIKKAEP 2142
>gi|354497473|ref|XP_003510844.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cricetulus
griseus]
Length = 510
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 257 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 316
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 317 IHFHEINNKMVECKKAQPKEVMSPT 341
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 97 ATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQV 155
E LR YF +FG + + V +DP RGFGFVTF ++ D+V +S HE+ + +
Sbjct: 179 VVTEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTI 238
Query: 156 AIDSATP 162
A P
Sbjct: 239 DPKVAFP 245
>gi|317027293|ref|XP_001400598.2| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus niger CBS
513.88]
Length = 561
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q KIFVG + QEA D + +F++FGR++D + D K TG RGFGFVTF E
Sbjct: 188 QEKTSKIFVGGVSQEANEHDFKEFFAQFGRVIDATLMID-KDTGRPRGFGFVTFDSEAAV 246
Query: 141 DRVSRRSHEICGQQVAIDSATP 162
+ EICG+ + + A P
Sbjct: 247 EAALSGPLEICGKPIEVKKAQP 268
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T + L+ YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 109 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 168
Query: 147 SHEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 169 EHYLDGKIIDPKRAIPRDE 187
>gi|321463296|gb|EFX74313.1| hypothetical protein DAPPUDRAFT_307331 [Daphnia pulex]
Length = 393
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
+K+F+G L T E L+++F ++G+I+DV V KDPK RGFGFVT+A + D +
Sbjct: 44 RKLFIGGLDYRTTDESLKKHFEQWGQIVDVVVMKDPKTRKSRGFGFVTYARAFMVDEAQA 103
Query: 145 RRSHEICGQQVAIDSATPLDDAG 167
R H + G++V A P D G
Sbjct: 104 ARPHRVDGREVEPKRAVPRDLIG 126
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 71 PGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFG 130
P G+ E+S + KK+FVG L + EDL++YFS FG I V V + + RGF
Sbjct: 121 PRDLIGKPEASSTV-KKLFVGGLRDDVEEEDLQKYFSTFGPIASVNVVTEKETNKKRGFA 179
Query: 131 FVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLDD 165
FV F + D+V R H + G+ + + A D
Sbjct: 180 FVEFDDYDPVDKVVLIRDHTVKGRHLDVKKAISKAD 215
>gi|195574505|ref|XP_002105229.1| GD21374 [Drosophila simulans]
gi|194201156|gb|EDX14732.1| GD21374 [Drosophila simulans]
Length = 2951
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+F+G L T E+L+ +F ++G I+DV V KDP+ RGFGF+T++ + D +
Sbjct: 2617 RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 2676
Query: 146 -RSHEICGQQVAIDSATPLDD 165
R H+I G+ V A P D
Sbjct: 2677 SRPHKIDGRVVEPKRAVPRQD 2697
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS- 144
KK+FVG L + + +R YF FG I+D+ + D + RGF FV F + D+V
Sbjct: 2708 KKLFVGALKDDHDEQSIRDYFQNFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVL 2767
Query: 145 RRSHEICGQQVAIDSATP 162
++ H++ G+ V + A P
Sbjct: 2768 QKQHQLNGKMVDVKKALP 2785
>gi|26350925|dbj|BAC39099.1| unnamed protein product [Mus musculus]
Length = 301
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED++ YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 88 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 147
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 148 IHFHEINNKMVECKKAQPKEVMSPT 172
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+F+G L + T E LR YF +FG + + V +DP RGFGFVTF ++ D+V +S
Sbjct: 1 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 60
Query: 148 -HEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 61 RHELDSKTIDPKVAFP 76
>gi|432104101|gb|ELK30931.1| Heterogeneous nuclear ribonucleoprotein A/B [Myotis davidii]
Length = 308
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEV--VADRV 143
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE V +
Sbjct: 83 KKIFVGGLNPEATEEKIREYFGEFGEIEAIDLPMDPKSNKRRGFVFITFKEEEEPVKKVL 142
Query: 144 SRRSHEICGQQV-AIDSATPLD 164
++ H I G ++ AID P+D
Sbjct: 143 EKKFHTISGSKIEAID--LPMD 162
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SRR 146
+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V ++
Sbjct: 1 MFVGHLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFM 173
H++ G+ + A + + F+
Sbjct: 61 EHKLDGRVIDPKKAMAMKKEPVKKIFV 87
>gi|308465164|ref|XP_003094843.1| CRE-HRP-1 protein [Caenorhabditis remanei]
gi|308246407|gb|EFO90359.1| CRE-HRP-1 protein [Caenorhabditis remanei]
Length = 344
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD-RVS 144
+KIFVG L T E +R ++S+FG I D+ V +DP RGFGFVTF + D +
Sbjct: 23 RKIFVGGLTSNTTDELMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFTAKTEVDAAMK 82
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQN 171
+R H I G+ V A P DD S++
Sbjct: 83 QRPHVIDGKTVDPKRAVPRDDKNRSES 109
Score = 42.7 bits (99), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
K+++V + ++ + L YFS++G + + D RGFGFVTF + D+ V
Sbjct: 114 KRLYVSGVREDHNEDMLTDYFSKYGNVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG 182
++SH + G + + D+ +Q M ET GG
Sbjct: 174 QKSHMVNGHRCDVRKGLSKDEMSKAQ--MSRDRETRGG 209
>gi|291045424|ref|NP_001166975.1| DAZ associated protein 1 [Danio rerio]
Length = 418
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSRR 146
IFVG +P +LR YF+RFG + +V + D ++ RGFGF+TF AE+ V V+
Sbjct: 127 IFVGGIPHNCGEAELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMH 186
Query: 147 SHEICGQQVAIDSATPLDDAGPS 169
H+I G++V + A P D P+
Sbjct: 187 FHDIMGKKVEVKKAEPRDSKAPA 209
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V +
Sbjct: 24 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDT 83
Query: 146 RSHEICGQQVAIDSATP 162
+ H + G+ + TP
Sbjct: 84 KPHNLDGRNIDPKPCTP 100
>gi|289741549|gb|ADD19522.1| RNA-binding protein musashi [Glossina morsitans morsitans]
Length = 531
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
++ K+FVGR ++ A+DL+ YFS+FG + DV++PK R F FVTF + VA
Sbjct: 188 NQVPCKVFVGRCTEDMNADDLKDYFSKFGEVTDVFIPKP-----FRAFSFVTFLDPEVAQ 242
Query: 142 RVSRRSHEICGQQVAIDSATP 162
+ H I G V + +A P
Sbjct: 243 SLCGEDHIIKGISVHVSNAAP 263
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R ES R I +G LP + T + LR YF +G +L + KD K +GFGFV F
Sbjct: 99 RIESRPRCTDLIVLG-LPWKTTEDSLRSYFETYGEVLMTQIKKDMKSGQSKGFGFVRFGS 157
Query: 137 EVVADRVSRRSHEICGQ--QVAIDSATPLDDAGPSQNFMMNAAE 178
V RV H I G+ +V + ++ + + P + F+ E
Sbjct: 158 YDVQVRVLSTRHLIDGRWCEVKVPNSKGMVNQVPCKVFVGRCTE 201
>gi|119614917|gb|EAW94511.1| musashi homolog 2 (Drosophila), isoform CRA_f [Homo sapiens]
Length = 328
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATPLD 164
HEI + V A P +
Sbjct: 170 IHFHEINNKMVECKKAQPKE 189
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G SQ K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA
Sbjct: 11 GSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATP 162
+ D+V + HE+ + + A P
Sbjct: 71 DPASVDKVLGQPHHELDSKTIDPKVAFP 98
>gi|388500070|gb|AFK38101.1| unknown [Lotus japonicus]
gi|388508218|gb|AFK42175.1| unknown [Lotus japonicus]
Length = 373
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L +E T ++F ++G I D + KD K RGFGF+T+A+ V D+V
Sbjct: 46 KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTAQPRGFGFITYADPSVVDKVIED 105
Query: 147 SHEICGQQVAIDSATP 162
+H I G+QV I P
Sbjct: 106 THIINGKQVEIKRTIP 121
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG +P T ++ R +F+R+G + D + +D RGFGF+TF E D +
Sbjct: 133 KKIFVGGIPSNVTEDEFRDFFTRYGEVKDNQIMRDHSTNRSRGFGFITFDSEDAVDDLLS 192
Query: 146 RSHEI--CGQQVAIDSATP 162
++I G QV I A P
Sbjct: 193 MGNKIDFAGTQVEIKKAEP 211
>gi|157423039|gb|AAI53535.1| Dazap1 protein [Danio rerio]
Length = 385
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSRR 146
IFVG +P +LR YF+RFG + +V + D ++ RGFGF+TF AE+ V V+
Sbjct: 115 IFVGGIPHNCGEAELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMH 174
Query: 147 SHEICGQQVAIDSATPLDDAGPS 169
H+I G++V + A P D P+
Sbjct: 175 FHDIMGKKVEVKKAEPRDSKAPA 197
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDT 71
Query: 146 RSHEICGQQVAIDSATP 162
+ H + G+ + TP
Sbjct: 72 KPHNLDGRNIDPKPCTP 88
>gi|116787897|gb|ABK24684.1| unknown [Picea sitchensis]
Length = 375
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 11/125 (8%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG +P T ++ + YFS+FG++ + + +D RGFGF+TF +E+VV + +S
Sbjct: 133 KKIFVGGIPTTITEDEFKDYFSKFGKVAEHQIMQDRSTGRSRGFGFITFDSEQVVEEIIS 192
Query: 145 R-RSHEICGQQVAIDSA---TPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFD 200
+ + E+ G+QV I A P DAGP GG GG +Y F+
Sbjct: 193 QGKMIELGGKQVEIKKAEPKKPSSDAGPVHGIDNRPPYIPGGVGGFRDSYS------GFE 246
Query: 201 DWGYG 205
GYG
Sbjct: 247 GAGYG 251
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L + T ++FS++G + D + KD RGFGFVT+A+ V D+V
Sbjct: 47 KIFIGGLSRSTTTVVFTKHFSKYGELTDSVIMKDRHTGQPRGFGFVTYADASVVDKVIED 106
Query: 147 SHEICGQQVAIDSATP 162
H + G+ V I P
Sbjct: 107 KHILDGRTVEIKRTIP 122
>gi|296085054|emb|CBI28469.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG L +E + +YF ++G I D V KD + RGFGF+T+A+ V D V +
Sbjct: 19 KIFVGGLAKETNLDTFTKYFEKYGEITDSVVMKDRQTGRPRGFGFITYADPSVVDEVIQE 78
Query: 147 SHEICGQQVAIDSATP 162
+H I G+QV I P
Sbjct: 79 THIINGKQVEIKRTIP 94
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G +S+ +KIFVG + + ++ + +FS++G++++ + D RGFGF+ F
Sbjct: 96 GSSQSNDFKTRKIFVGGILTSVSEDEFKNFFSKYGKVVEHEIIHDHVTKRSRGFGFIVFD 155
Query: 136 EEVVADRVSRRSHEI--CGQQVAIDSATP 162
E V D + + I G QV I A P
Sbjct: 156 NEQVVDDLLTNGNMIDMEGTQVEIKKAEP 184
>gi|20373175|ref|NP_620412.1| RNA-binding protein Musashi homolog 2 isoform a [Homo sapiens]
gi|51316513|sp|Q96DH6.1|MSI2H_HUMAN RecName: Full=RNA-binding protein Musashi homolog 2;
Short=Musashi-2
gi|16306702|gb|AAH01526.1| Musashi homolog 2 (Drosophila) [Homo sapiens]
gi|123983004|gb|ABM83243.1| musashi homolog 2 (Drosophila) [synthetic construct]
gi|123997687|gb|ABM86445.1| musashi homolog 2 (Drosophila) [synthetic construct]
gi|261861224|dbj|BAI47134.1| musashi homolog 2 [synthetic construct]
gi|380784487|gb|AFE64119.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|383415747|gb|AFH31087.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|384941194|gb|AFI34202.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|392583801|dbj|BAM24698.2| musashi homolog 2 [Sus scrofa]
gi|410219648|gb|JAA07043.1| musashi homolog 2 [Pan troglodytes]
gi|410258766|gb|JAA17350.1| musashi homolog 2 [Pan troglodytes]
gi|410287210|gb|JAA22205.1| musashi homolog 2 [Pan troglodytes]
gi|410335871|gb|JAA36882.1| musashi homolog 2 [Pan troglodytes]
gi|417399031|gb|JAA46548.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 328
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATPLD 164
HEI + V A P +
Sbjct: 170 IHFHEINNKMVECKKAQPKE 189
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G SQ K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA
Sbjct: 11 GSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATP 162
+ D+V + HE+ + + A P
Sbjct: 71 DPASVDKVLGQPHHELDSKTIDPKVAFP 98
>gi|359488807|ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
vinifera]
Length = 2363
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+KIF+G L +E T+ ++F ++G I D + KD K RGFGFVT+A+ V D+V +
Sbjct: 2028 RKIFIGGLARETTSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADLSVVDQVIQ 2087
Query: 146 RSHEICGQQVAIDSATP 162
+H I G+QV I P
Sbjct: 2088 DTHVINGKQVEIKRTIP 2104
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG +P T E+ + +F+++G + D + +D + RGFGFVTF E+ V D +S
Sbjct: 2116 KKIFVGGIPATVTEEEFKDFFTQYGEVKDHQIMRDHSTSRSRGFGFVTFDTEQAVDDLLS 2175
Query: 145 R-RSHEICGQQVAIDSA 160
+ E+ G QV I A
Sbjct: 2176 QGNKLELAGAQVEIKKA 2192
>gi|119614918|gb|EAW94512.1| musashi homolog 2 (Drosophila), isoform CRA_g [Homo sapiens]
Length = 255
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATPLDDAGP 168
HEI + V A P + P
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFP 193
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G SQ K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA
Sbjct: 11 GSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATP 162
+ D+V + HE+ + + A P
Sbjct: 71 DPASVDKVLGQPHHELDSKTIDPKVAFP 98
>gi|89130657|gb|AAI14332.1| Dazap1 protein [Danio rerio]
Length = 384
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSRR 146
IFVG +P +LR YF+RFG + +V + D ++ RGFGF+TF AE+ V V+
Sbjct: 115 IFVGGIPHNCGEAELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMH 174
Query: 147 SHEICGQQVAIDSATPLDDAGPS 169
H+I G++V + A P D P+
Sbjct: 175 FHDIMGKKVEVKKAEPRDSKAPA 197
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDT 71
Query: 146 RSHEICGQQVAIDSATP 162
+ H + G+ + TP
Sbjct: 72 KPHNLDGRNIDPKPCTP 88
>gi|358367583|dbj|GAA84201.1| heterogeneous nuclear ribonucleoprotein Hrp1 [Aspergillus kawachii
IFO 4308]
Length = 471
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q KIFVG + QEA D + +F++FGR++D + D RGFGFVTF E +
Sbjct: 79 QEKTSKIFVGGVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVE 138
Query: 142 RVSRRSHEICGQQVAIDSATP 162
EICG+ + + A P
Sbjct: 139 AALSGPLEICGKPIEVKKAQP 159
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+F+G L E T + L+ YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 148 HEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|422296095|gb|EKU23394.1| RNA-binding protein Musashi, partial [Nannochloropsis gaditana
CCMP526]
Length = 240
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 68/156 (43%), Gaps = 29/156 (18%)
Query: 7 SVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAPT 66
++E + + H L G + V +A P+E PV R GG GA
Sbjct: 98 AMEAAVSEAHMLDGRNLDVKKAVPREQAPAPV-RAIWGGTGA------------------ 138
Query: 67 LYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH 126
G Q I KK+FVG L + T E R YF +FG I D V D
Sbjct: 139 ---------GPQRQFQDI-KKVFVGGLSPDVTEEAFRAYFDKFGEITDAVVMMDRTTGRS 188
Query: 127 RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 162
RGFGFVT+AEE +V + H++ G+ + + A P
Sbjct: 189 RGFGFVTYAEEAAMKKVLSQQHDMEGRPMDVKRAEP 224
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G GE +Q KIFVG + T E L YF ++G + DV + +D G RGFGFV+FA
Sbjct: 37 GHGEYNQP--NKIFVGGVAWHTTEEGLSSYFGKYGELTDVVLMRDKNTGGPRGFGFVSFA 94
Query: 136 EEVVADRVSRRSHEICGQQVAIDSATPLDDA 166
+ +H + G+ + + A P + A
Sbjct: 95 TPAAMEAAVSEAHMLDGRNLDVKKAVPREQA 125
>gi|417409403|gb|JAA51208.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 292
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEV--VADRV 143
KKIFVG L EAT E++R YF FG I + +P DPK RGF F+TF EE V +
Sbjct: 114 KKIFVGGLNPEATEEEIREYFGEFGEIEAIDLPMDPKSHKRRGFVFITFKEEEEPVRKAL 173
Query: 144 SRRSHEICGQQVAIDSATP 162
++ H I + I A P
Sbjct: 174 EKKFHTIGASKCEIKVALP 192
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + DL+ YFS+FG ++D + DP RGFGF+ F + ++V +
Sbjct: 31 KMFVGGLSWDTSKNDLKDYFSKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 90
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 91 KEHRLDGRVI 100
>gi|358340633|dbj|GAA48482.1| RNA-binding protein Musashi, partial [Clonorchis sinensis]
Length = 154
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 66 TLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTG 125
T DH + ++ R KK+F+G + TAE+L +FS FG++ + D
Sbjct: 48 TTMDHWSATLLAAQALVRT-KKVFIGGVATGTTAEELETFFSEFGKVETCELMMDKSTNR 106
Query: 126 HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 162
HRGFGFVTF EV A++V HE+ G+ V A P
Sbjct: 107 HRGFGFVTFESEVAAEKVCNIHYHELNGKMVEAKKALP 144
>gi|1814274|gb|AAC50956.1| ABBP-1 [Homo sapiens]
Length = 331
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 86 KKIFVGRL-PQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV- 143
KKIFVG L P+ T E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 152 KKIFVGGLNPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVL 211
Query: 144 SRRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 212 EKKFHTVSGSKCEIKVAQPKE 232
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 128
Query: 146 RSHEICGQQVAIDSATPL 163
+ H + G+ + A +
Sbjct: 129 KEHRLDGRVIDPKKAMAM 146
>gi|17157989|ref|NP_473384.1| RNA-binding protein Musashi homolog 2 isoform 1 [Mus musculus]
gi|51316506|sp|Q920Q6.1|MSI2H_MOUSE RecName: Full=RNA-binding protein Musashi homolog 2;
Short=Musashi-2
gi|15982562|dbj|BAB69485.1| RNA-binding protein Musashi2-L [Mus musculus]
gi|37619701|tpg|DAA01567.1| TPA_exp: RNA-binding protein [Mus musculus]
gi|74146912|dbj|BAE41407.1| unnamed protein product [Mus musculus]
gi|74150444|dbj|BAE32260.1| unnamed protein product [Mus musculus]
Length = 346
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATPLD 164
HEI + V A P +
Sbjct: 170 IHFHEINNKMVECKKAQPKE 189
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G SQ K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA
Sbjct: 11 GSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 136 EEVVADRVSRRSHE 149
+ D+V + H
Sbjct: 71 DPASVDKVLGQPHH 84
>gi|15982560|dbj|BAB69484.1| RNA-binding protein Musashi2-S [Mus musculus]
gi|26340376|dbj|BAC33851.1| unnamed protein product [Mus musculus]
gi|26340420|dbj|BAC33873.1| unnamed protein product [Mus musculus]
gi|85057100|gb|AAI11810.1| Msi2h protein [Mus musculus]
Length = 328
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATPLD 164
HEI + V A P +
Sbjct: 170 IHFHEINNKMVECKKAQPKE 189
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G SQ K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA
Sbjct: 11 GSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATP 162
+ D+V + HE+ + + A P
Sbjct: 71 DPASVDKVLGQPHHELDSKTIDPKVAFP 98
>gi|359320431|ref|XP_532379.3| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog
2 isoform 1 [Canis lupus familiaris]
Length = 328
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATPLD 164
HEI + V A P +
Sbjct: 170 IHFHEINNKMVECKKAQPKE 189
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G SQ K+F+G L + + E LR YFS+FG I V ++P RGFGFVTFA
Sbjct: 11 GSANDSQHDPGKMFIGGLSWQTSPESLRDYFSKFGEIXKCLVLRNPTTKRSRGFGFVTFA 70
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATP 162
+ D+V + HE+ + + A P
Sbjct: 71 DPASVDKVLGQPHHELDSKTIDPKVAFP 98
>gi|242042864|ref|XP_002459303.1| hypothetical protein SORBIDRAFT_02g002070 [Sorghum bicolor]
gi|241922680|gb|EER95824.1| hypothetical protein SORBIDRAFT_02g002070 [Sorghum bicolor]
Length = 329
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KK+F+G L T E+ R YF FG + DV V D + RGFGFVTF E +V R
Sbjct: 97 KKVFIGGLRDNITEEEFRSYFETFGTVTDVVVIYDSATSRSRGFGFVTFDSEEAVGKVMR 156
Query: 146 RS-HEICGQQVAIDSATPLDDA 166
+S H + G +V A P D+A
Sbjct: 157 QSFHNLNGTKVEAKIAIPKDEA 178
>gi|240849376|ref|NP_001155365.1| Vg1 mRNA binding protein 40 [Xenopus laevis]
gi|49257602|gb|AAH74212.1| Unknown (protein for MGC:83385) [Xenopus laevis]
gi|157415960|gb|ABV54637.1| Vg1 mRNA binding protein 40 [Xenopus laevis]
Length = 326
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EA + +R YF FG I V +P DPK RGF F+TF EE ++
Sbjct: 149 KKIFVGGLNPEAGEDKIREYFETFGEIEAVELPMDPKTNKRRGFVFITFKEEEPVKKILE 208
Query: 145 RRSHEICGQQVAIDSATP 162
++ H + G + I A P
Sbjct: 209 KKFHNVSGSKCEIKIAQP 226
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV- 143
G K+FVG L + + +DL+ YF +FG + D + DP RGFGF+ F + D+V
Sbjct: 64 GVKMFVGGLSWDTSKKDLKDYFEKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKVL 123
Query: 144 SRRSHEICGQQVAIDSATPL 163
+ H + G+ + A +
Sbjct: 124 EHKEHRLDGRLIDPKKAMAM 143
>gi|350635265|gb|EHA23627.1| hypothetical protein ASPNIDRAFT_52492 [Aspergillus niger ATCC 1015]
Length = 580
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q KIFVG + QEA D + +F++FGR++D + D K TG RGFGFVTF E
Sbjct: 188 QEKTSKIFVGGVSQEANEHDFKEFFAQFGRVIDATLMID-KDTGRPRGFGFVTFDSEAAV 246
Query: 141 DRVSRRSHEICGQQVAIDSATP 162
+ EICG+ + + A P
Sbjct: 247 EAALSGPLEICGKPIEVKKAQP 268
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T + L+ YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 109 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 168
Query: 147 SHEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 169 EHYLDGKIIDPKRAIPRDE 187
>gi|108744009|gb|ABG02277.1| heterogeneous nuclear ribonucleoprotein A/B [Haplochromis burtoni]
Length = 316
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEV-VADRVS 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+T+ EE V +
Sbjct: 140 KKIFVGGLNPEATEETIREYFGAFGEIETIELPIDPKSKKRRGFIFITYKEETSVKKCLE 199
Query: 145 RRSHEICGQQVAIDSATP 162
++ H I G + + A P
Sbjct: 200 KKYHNIQGGRCELKIAQP 217
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YFS+FG + D + D RGFGFV F + D+V +
Sbjct: 57 KMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDSNTGRSRGFGFVLFKDSASVDKVLEQ 116
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 117 KEHRLDGRNI 126
>gi|395513319|ref|XP_003760874.1| PREDICTED: DAZ-associated protein 1 [Sarcophilus harrisii]
Length = 424
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 13/127 (10%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
S KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E
Sbjct: 124 SDNNKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 183
Query: 140 ADR-VSRRSHEICGQQVAIDSATPLD-------DAGPSQ---NFMMNAAETFGGYGGPMR 188
D+ V+ H+I G++V + A P D G SQ M NAA G G P
Sbjct: 184 VDQAVNMHFHDIMGKKVEVKRAEPRDSKSQVPGQPGASQWGSRLMPNAAN--GWAGQPPP 241
Query: 189 TYGRMYG 195
T+ + YG
Sbjct: 242 TWQQGYG 248
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E + +K+FVG L T E LR YFS++G ++D + KD RGFGFV F +
Sbjct: 18 RSERPELKTRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKD 77
Query: 137 -EVVADRVSRRSHEICGQQVAIDSATP 162
V ++ R H + G+ + TP
Sbjct: 78 PNCVGTVLASRPHTLDGRNIDPKPCTP 104
>gi|334326768|ref|XP_001373196.2| PREDICTED: DAZ-associated protein 1-like [Monodelphis domestica]
Length = 452
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 13/127 (10%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
S KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E
Sbjct: 153 SDNNKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 212
Query: 140 ADR-VSRRSHEICGQQVAIDSATPLD-------DAGPSQ---NFMMNAAETFGGYGGPMR 188
D+ V+ H+I G++V + A P D G SQ M NAA G G P
Sbjct: 213 VDQAVNMHFHDIMGKKVEVKRAEPRDSKSQVPGQPGASQWGSRLMPNAAN--GWAGQPPP 270
Query: 189 TYGRMYG 195
T+ + YG
Sbjct: 271 TWQQGYG 277
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVS 144
+K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 56 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 115
Query: 145 RRSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 116 SRPHTLDGRNIDPKPCTP 133
>gi|426344801|ref|XP_004038942.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Gorilla gorilla gorilla]
Length = 291
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 56 ATRYAALGAPTLYDHPGSF--YGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRIL 113
R A+ A DH S + ++QR K+F+G L + T +DL+ YFS+FG ++
Sbjct: 1 VVRGGAIKARRRQDHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVV 60
Query: 114 DVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNF 172
D + DP RGFGFV F E D+V ++ H++ G+ + A + P +
Sbjct: 61 DCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKI 120
Query: 173 MM----------NAAETFGGYG 184
+ E FGG+G
Sbjct: 121 FVGGLSPDTPEEKIREYFGGFG 142
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 118 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 177
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 178 KKYHNVGLSKCEIKVAM 194
>gi|350421557|ref|XP_003492883.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like, partial
[Bombus impatiens]
Length = 241
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
R + + R KKIFVG + Q+ ++++++ YF++FG++ + + D + HRGFGFVTF
Sbjct: 140 NRAKQANRT-KKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFE 198
Query: 136 EEVVADRVSR-RSHEICGQQVAIDSATPLDDAGP 168
E V DRV H I ++V A P + P
Sbjct: 199 NEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVQP 232
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + ++E LR YF FG + DV + KDP RGFGF+TFAE D+V +
Sbjct: 62 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 121
Query: 147 S-HEICGQQVAIDSATPLDDA 166
H + G+++ ATP + A
Sbjct: 122 PIHTLDGKKIDPKHATPKNRA 142
>gi|334322422|ref|XP_001367956.2| PREDICTED: RNA-binding protein Musashi homolog 2-like [Monodelphis
domestica]
Length = 302
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 66 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 125
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 126 IHFHEINNKMVECKKAQP 143
>gi|296477081|tpg|DAA19196.1| TPA: musashi 2-like [Bos taurus]
Length = 324
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 166 IHFHEINNKMVECKKAQP 183
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA+ D+V +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 146 RSHEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 78 PHHELDSKTIDPKVAFP 94
>gi|301759651|ref|XP_002915684.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Ailuropoda
melanoleuca]
Length = 324
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 166 IHFHEINNKMVECKKAQP 183
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA+ D+V +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 147 SHE 149
H
Sbjct: 78 PHH 80
>gi|410980705|ref|XP_003996716.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Felis catus]
Length = 333
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 97 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 156
Query: 146 -RSHEICGQQVAIDSATPLDDAGP 168
HEI + V A P + P
Sbjct: 157 IHFHEINNKMVECKKAQPKEVMFP 180
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 101 DLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQVAIDS 159
LR YFS+FG I + V +DP RGFGFVTFA+ D+V + HE+ + +
Sbjct: 23 SLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKV 82
Query: 160 ATP 162
A P
Sbjct: 83 AFP 85
>gi|348531962|ref|XP_003453476.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oreochromis niloticus]
Length = 315
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEV-VADRVS 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+T+ EE V +
Sbjct: 140 KKIFVGGLNPEATEETIREYFGAFGEIETIELPIDPKSKKRRGFIFITYKEETSVKKCLE 199
Query: 145 RRSHEICGQQVAIDSATP 162
++ H I G + + A P
Sbjct: 200 KKYHNIQGGRCELKIAQP 217
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + DL+ YFS+FG + D + D RGFGFV F + D+V +
Sbjct: 57 KVFVGGLSWDTSKTDLKDYFSKFGEVSDCTIKMDSNTGRSRGFGFVLFKDSASVDKVLEQ 116
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 117 KEHRLDGRNI 126
>gi|345322713|ref|XP_001506312.2| PREDICTED: RNA-binding protein Musashi homolog 2-like
[Ornithorhynchus anatinus]
Length = 251
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 146 -RSHEICGQQVAIDSATPLDDAGP 168
HEI + V A P + P
Sbjct: 166 IHFHEINNKMVECKKAQPKEVMFP 189
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA+ D+V ++
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 77
Query: 146 RSHEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 78 PHHELDSKTIDPKVAFP 94
>gi|331284184|ref|NP_001193585.1| RNA-binding protein Musashi homolog 2 [Bos taurus]
Length = 354
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 136 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 195
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 196 IHFHEINNKMVECKKAQP 213
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA+ D+V +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 146 RSHEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 78 PHHELDSKTIDPKVAFP 94
>gi|255948100|ref|XP_002564817.1| Pc22g08010 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591834|emb|CAP98089.1| Pc22g08010 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 456
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q KIFVG + QEAT +D +++F +FGR++D + D RGFGFVTF + +
Sbjct: 79 QEKTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMMDKDTGRPRGFGFVTFDGDAAVE 138
Query: 142 RVSRRSHEICGQQVAIDSATP 162
+ R EI G+ + + A P
Sbjct: 139 KALSRPLEILGKPIEVKKAQP 159
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+F+G L E T E LR YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDESLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDAKTVNTVMVKE 60
Query: 148 HEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|260793326|ref|XP_002591663.1| hypothetical protein BRAFLDRAFT_223429 [Branchiostoma floridae]
gi|229276872|gb|EEN47674.1| hypothetical protein BRAFLDRAFT_223429 [Branchiostoma floridae]
Length = 431
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 84 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+ +K+F+GR ++ +AEDLR YF +FG + DV++PK R F FVTF + A +
Sbjct: 188 LSRKVFIGRCTEDMSAEDLRAYFQQFGEVTDVFIPKP-----FRAFAFVTFQDGETAQNL 242
Query: 144 SRRSHEICGQQVAIDSATP 162
H I G V + +A P
Sbjct: 243 CGEDHIIKGASVHVSNAEP 261
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+ V LP + T ++LR Y ++G +L V + KDPK +GFGFV FAE V +V +
Sbjct: 105 LIVLGLPWKTTEQELREYMEQYGEVLMVQIKKDPKTGNSKGFGFVRFAEYEVQLKVMTQR 164
Query: 148 HEICG 152
H I G
Sbjct: 165 HMIDG 169
>gi|134057544|emb|CAK48898.1| unnamed protein product [Aspergillus niger]
Length = 471
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q KIFVG + QEA D + +F++FGR++D + D RGFGFVTF E +
Sbjct: 79 QEKTSKIFVGGVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVE 138
Query: 142 RVSRRSHEICGQQVAIDSATP 162
EICG+ + + A P
Sbjct: 139 AALSGPLEICGKPIEVKKAQP 159
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+F+G L E T + L+ YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 148 HEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|41056104|ref|NP_957403.1| musashi homolog 2 [Danio rerio]
gi|32822918|gb|AAH55251.1| Musashi homolog 2b (Drosophila) [Danio rerio]
Length = 408
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 170 IHFHEINNKMVECKKAQP 187
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G SQ K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA
Sbjct: 11 GSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATP 162
+ D+V ++ HE+ + + A P
Sbjct: 71 DAASVDKVLAQPHHELDSKTIDPKVAFP 98
>gi|354472023|ref|XP_003498240.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cricetulus
griseus]
Length = 343
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 166 IHFHEINNKMVECKKAQP 183
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA+ D+V +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 147 SHE 149
H
Sbjct: 78 PHH 80
>gi|344243477|gb|EGV99580.1| RNA-binding protein Musashi-like 2 [Cricetulus griseus]
Length = 325
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 146 -RSHEICGQQVAIDSATPLD 164
HEI + V A P +
Sbjct: 148 IHFHEINNKMVECKKAQPKE 167
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA+ D+V +
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 148 HE 149
H
Sbjct: 61 HH 62
>gi|296087606|emb|CBI34862.3| unnamed protein product [Vitis vinifera]
Length = 281
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L +E T+ ++F ++G I D + KD K RGFGFVT+A+ V D+V +
Sbjct: 42 KIFIGGLARETTSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADLSVVDQVIQD 101
Query: 147 SHEICGQQVAIDSATP 162
+H I G+QV I P
Sbjct: 102 THVINGKQVEIKRTIP 117
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG +P T E+ + +F+++G + D + +D + RGFGFVTF E+ V D +S
Sbjct: 129 KKIFVGGIPATVTEEEFKDFFTQYGEVKDHQIMRDHSTSRSRGFGFVTFDTEQAVDDLLS 188
Query: 145 R-RSHEICGQQVAIDSA 160
+ E+ G QV I A
Sbjct: 189 QGNKLELAGAQVEIKKA 205
>gi|417398472|gb|JAA46269.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 293
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 170 IHFHEINNKMVECKKAQP 187
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G SQ K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA
Sbjct: 11 GSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATP 162
+ D+V + HE+ + + A P
Sbjct: 71 DPASVDKVLGQPHHELDSKTIDPKVAFP 98
>gi|322792842|gb|EFZ16675.1| hypothetical protein SINV_08972 [Solenopsis invicta]
Length = 335
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + +D++ +FS+FG I++V +P D + +GF F+TF +E+VV + +
Sbjct: 137 KIFVGGLSTELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 196
Query: 146 RSHEICGQQVAIDSATP 162
I G++V + ATP
Sbjct: 197 SKQTINGKEVDVKKATP 213
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
+K+FVG L E T ++LR +FS +G I + V DP RGF F+ FA+ D++ S
Sbjct: 56 RKLFVGGLSWETTDKELREHFSAYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMS 115
Query: 145 RRSHEICGQQV 155
H I ++V
Sbjct: 116 AGDHVINNKKV 126
>gi|397493092|ref|XP_003817447.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Pan paniscus]
gi|403279708|ref|XP_003931388.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Saimiri
boliviensis boliviensis]
gi|194379116|dbj|BAG58109.1| unnamed protein product [Homo sapiens]
Length = 324
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 148 IHFHEINNKMVECKKAQP 165
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA+ D+V +
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 148 HE 149
H
Sbjct: 61 HH 62
>gi|449479907|ref|XP_002196910.2| PREDICTED: RNA-binding protein Musashi homolog 2 isoform 1
[Taeniopygia guttata]
Length = 306
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 146 -RSHEICGQQVAIDSATPLDDAGP 168
HEI + V A P + P
Sbjct: 148 IHFHEINNKMVECKKAQPKEVMFP 171
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SRR 146
+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA+ D+V ++
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQP 60
Query: 147 SHEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 61 HHELDSKTIDPKVAFP 76
>gi|194217163|ref|XP_001500456.2| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog
2-like, partial [Equus caballus]
Length = 323
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 105 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 164
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 165 IHFHEINNKMVECKKAQP 182
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 96 EATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHE 149
+ + + LR YFS+FG I + V +DP RGFGFVTFA+ D+V + H
Sbjct: 26 QTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHH 79
>gi|307193268|gb|EFN76159.1| RNA-binding protein squid [Harpegnathos saltator]
Length = 334
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + +D++ +FS+FG I++V +P D + +GF F+TF +E+VV + +
Sbjct: 155 KIFVGGLSTELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 214
Query: 146 RSHEICGQQVAIDSATP 162
I G++V + ATP
Sbjct: 215 SKQTINGKEVDVKKATP 231
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+K+FVG L E T ++LR +FS +G I + V DP RGF F+ FA+ D++
Sbjct: 74 RKLFVGGLSWETTDKELREHFSSYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKI 131
>gi|326931600|ref|XP_003211915.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Meleagris
gallopavo]
Length = 261
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 43 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 102
Query: 146 -RSHEICGQQVAIDSATPLD 164
HEI + V A P +
Sbjct: 103 IHFHEINNKMVECKKAQPKE 122
>gi|156380774|ref|XP_001631942.1| predicted protein [Nematostella vectensis]
gi|156218991|gb|EDO39879.1| predicted protein [Nematostella vectensis]
Length = 186
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS- 144
KKIF+G L + ED+++YFS+FG+I + + D HRGFGFVTF E AD+
Sbjct: 89 KKIFIGGLSTNTSEEDMKKYFSQFGKITETMLMFDKATQRHRGFGFVTFESENSADKACD 148
Query: 145 RRSHEICGQQVAIDSATP 162
+ H I ++V + A P
Sbjct: 149 TQYHLINNKKVEVKKAQP 166
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + TAE LR++F +FG + + V +DP RGFGF+TF + D V
Sbjct: 1 KMFIGGLSWQTTAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNS 60
Query: 147 -SHEICGQQVAIDSATP 162
+ E+ G+++ A P
Sbjct: 61 GAQELDGKKIDPKLAVP 77
>gi|443691822|gb|ELT93572.1| hypothetical protein CAPTEDRAFT_180669 [Capitella teleta]
Length = 243
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T +D+++YF +FG+I D + D HRGF FVTF E V D+V
Sbjct: 117 KKIFVGGLSASTTVDDVKQYFEQFGKIEDAMLMFDKATQRHRGFAFVTFENEDVVDKVCE 176
Query: 146 -RSHEICGQQVAIDSATPLDDAGP 168
HEI + V A P + P
Sbjct: 177 IHFHEINNKMVECKKAQPKEVMMP 200
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + T E LR YF+++G I + V +DP RGFGFVTF++ D+V +
Sbjct: 25 KMFIGGLSWQTTPEGLREYFAKYGEISECMVMRDPITKRSRGFGFVTFSDPASVDKVLAN 84
Query: 146 RSHEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 85 GPHELDSKVIDPKVAFP 101
>gi|224102217|ref|XP_002312594.1| predicted protein [Populus trichocarpa]
gi|222852414|gb|EEE89961.1| predicted protein [Populus trichocarpa]
Length = 195
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP T + R+YF FG + DV + D RGFGF++F E DRV +
Sbjct: 102 KKIFVGGLPPTLTDDGFRQYFEAFGLVTDVVIMYDQSTQRPRGFGFISFDSEDAVDRVLQ 161
Query: 146 RS-HEICGQQVAIDSATP 162
R+ H++ G+QV + A P
Sbjct: 162 RTFHDLNGKQVEVKRALP 179
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + E + E L YF+++G +L V KD RGFGFV FA+ V DRV +
Sbjct: 7 KLFIGGISWETSEEKLGEYFTQYGDVLQTVVMKDKTTGRPRGFGFVVFADPSVLDRVLQD 66
Query: 147 SHEICGQQV 155
+H I G+ V
Sbjct: 67 THTIDGRTV 75
>gi|149053819|gb|EDM05636.1| similar to RNA-binding protein Musashi2-S (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 296
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 60 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 119
Query: 146 -RSHEICGQQVAIDSATPLD 164
HEI + V A P +
Sbjct: 120 IHFHEINNKMVECKKAQPKE 139
>gi|148683899|gb|EDL15846.1| Musashi homolog 2 (Drosophila), isoform CRA_a [Mus musculus]
Length = 296
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 60 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 119
Query: 146 -RSHEICGQQVAIDSATPLD 164
HEI + V A P +
Sbjct: 120 IHFHEINNKMVECKKAQPKE 139
>gi|54647597|gb|AAH84959.1| Msi1h protein [Xenopus laevis]
Length = 321
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E++V
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKICD 168
Query: 145 RRSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPT 193
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + T E LR YFS FG + + V +DP RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 147 S-HEICGQQVAIDSATP 162
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|113931574|ref|NP_001039236.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus (Silurana)
tropicalis]
gi|89272441|emb|CAJ82657.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus (Silurana)
tropicalis]
Length = 313
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EA + +R YF FG I + +P DPK RGF F+TF EE ++
Sbjct: 136 KKIFVGGLNPEAGEDKIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKILE 195
Query: 145 RRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 196 KKFHNVSGSKCEIKIAQPKE 215
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YFS+FG + D + DP RGFGF+ F + D+V +
Sbjct: 53 KMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKVLEQ 112
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 113 KEHRLDGRLI 122
>gi|195431559|ref|XP_002063804.1| GK15864 [Drosophila willistoni]
gi|194159889|gb|EDW74790.1| GK15864 [Drosophila willistoni]
Length = 556
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
++ K+FVGR ++ ++DLR YFS+FG + DV++P+ R F FVTF + VA
Sbjct: 188 HQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRP-----FRAFSFVTFLDPDVAQ 242
Query: 142 RVSRRSHEICGQQVAIDSATPLDDAGPS---QNFMMNAAETFG 181
+ H I G V + +A P + + Q++ N +FG
Sbjct: 243 SLCGEDHIIKGVSVHVSNAAPKAEQNRNHQGQSYNYNTGNSFG 285
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E+ R I +G LP + T + LR YF FG +L + KD K +GFGFV F
Sbjct: 99 RIETRLRCTDLIVLG-LPWKTTEDSLREYFESFGEVLMAQIKKDVKSGQSKGFGFVRFGS 157
Query: 137 EVVADRVSRRSHEICGQ--QVAIDSATPLDDAGPSQNFMMNAAE 178
RV H I G+ +V + ++ + P + F+ E
Sbjct: 158 YEAQMRVLSNRHLIDGRWCEVKVPNSKGMGHQVPCKVFVGRCTE 201
>gi|112983696|ref|NP_001037323.1| squid protein homologue [Bombyx mori]
gi|784909|dbj|BAA07210.1| Bmsqd-1 [Bombyx mori]
Length = 287
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + +++R +FS FG IL+V +P D + +GF F+TF +E+VV D +
Sbjct: 124 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 183
Query: 146 RSHEICGQQVAIDSATPLDD 165
I G++V + ATP D
Sbjct: 184 PKRTIGGKEVDVKRATPKPD 203
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
+K+FVG L E T ++LR +F + I + V P RGF F+ F A E + ++
Sbjct: 43 RKLFVGGLSWETTDKELRDHFGAYREIESINVKTVPNTGRSRGFAFIVFKAPESIDKVMA 102
Query: 145 RRSHEICGQQV 155
H I ++V
Sbjct: 103 AGEHTINNKKV 113
>gi|291405742|ref|XP_002719144.1| PREDICTED: musashi 2-like [Oryctolagus cuniculus]
Length = 306
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 148 IHFHEINNKMVECKKAQP 165
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SRR 146
+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA+ D+V +
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 147 SHEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 61 HHELDSKTIDPKVAFP 76
>gi|403222919|dbj|BAM41050.1| DAZ-associated protein 1 [Theileria orientalis strain Shintoku]
Length = 395
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPK-RTGHRGFGFVTF-AEEVVADRVS 144
+IF+ R+P +AT +DL YF +FG + D Y PK T ++GFGF++F +EE +
Sbjct: 115 RIFITRIPFDATKDDLEEYFKKFGTVYDAYCPKQSNYSTLNKGFGFISFDSEETIQKVFE 174
Query: 145 RRSHEICGQQVAIDSAT 161
H I G++V +D AT
Sbjct: 175 TSPHVIMGREVIVDRAT 191
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 79 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEV 138
++ +R K+FVGR+ + T + LR YFS+FG ++DVY+P+D + +GFGF+TFA +
Sbjct: 305 KTRERNAPKLFVGRIGYDTTVQTLRSYFSQFGDVVDVYIPRDAQTQKSKGFGFLTFANKN 364
Query: 139 VADRVSRRS--HEICGQQVAIDSA 160
V S H + G+ + +D A
Sbjct: 365 SIHTVLDPSLKHVLEGRDIIVDYA 388
>gi|355704546|gb|AES02263.1| musashi-like protein 2 [Mustela putorius furo]
Length = 306
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 89 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 148
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 149 IHFHEINNKMVECKKAQP 166
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA+ D+V +
Sbjct: 1 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 60
Query: 146 RSHEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 61 PHHELDSKTIDPKVAFP 77
>gi|291407048|ref|XP_002719860.1| PREDICTED: musashi 1 [Oryctolagus cuniculus]
Length = 568
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 315 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 374
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 375 IHFHEINNKMVECKKAQPKEVMSPT 399
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 98 TAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVA 156
AE LR YF +FG + + V +DP RGFGFVTFA++ D+V +S HE+ + +
Sbjct: 238 VAEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFADQAGVDKVLAQSRHELDSKTID 297
Query: 157 IDSATP 162
A P
Sbjct: 298 PKVAFP 303
>gi|25121993|ref|NP_733839.1| RNA-binding protein Musashi homolog 2 isoform b [Homo sapiens]
gi|332848594|ref|XP_003315679.1| PREDICTED: uncharacterized protein LOC748578 [Pan troglodytes]
gi|426347417|ref|XP_004041349.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Gorilla gorilla
gorilla]
gi|21752839|dbj|BAC04244.1| unnamed protein product [Homo sapiens]
gi|119614916|gb|EAW94510.1| musashi homolog 2 (Drosophila), isoform CRA_e [Homo sapiens]
Length = 251
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 146 -RSHEICGQQVAIDSATPLDDAGP 168
HEI + V A P + P
Sbjct: 166 IHFHEINNKMVECKKAQPKEVMFP 189
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA+ D+V +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 147 SH 148
H
Sbjct: 78 PH 79
>gi|395845801|ref|XP_003795610.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Otolemur
garnettii]
Length = 324
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFESEDVVEKVCE 147
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 148 IHFHEINNKMVECKKAQP 165
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA+ D+V +
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 148 HE 149
H
Sbjct: 61 HH 62
>gi|392332125|ref|XP_001081205.3| PREDICTED: RNA-binding protein Musashi homolog 2-like [Rattus
norvegicus]
Length = 295
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 77 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 136
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 137 IHFHEINNKMVECKKAQP 154
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 100 EDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQVAID 158
+ LR YFS+FG I + V +DP RGFGFVTFA+ D+V + HE+ + +
Sbjct: 2 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPK 61
Query: 159 SATP 162
A P
Sbjct: 62 VAFP 65
>gi|355568556|gb|EHH24837.1| hypothetical protein EGK_08563, partial [Macaca mulatta]
gi|355754027|gb|EHH57992.1| hypothetical protein EGM_07749, partial [Macaca fascicularis]
Length = 308
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 90 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 149
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 150 IHFHEINNKMVECKKAQP 167
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA+ D+V +
Sbjct: 2 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 61
Query: 146 RSHEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 62 PHHELDSKTIDPKVAFP 78
>gi|58332792|ref|NP_001011470.1| musashi RNA-binding protein 1 [Xenopus (Silurana) tropicalis]
gi|147899394|ref|NP_001081302.1| nrp-1B [Xenopus laevis]
gi|214632|gb|AAA49920.1| pot. RNA-binding protein (nrp-1B); putative [Xenopus laevis]
gi|52221204|gb|AAH82667.1| LOC397764 protein [Xenopus laevis]
gi|56970642|gb|AAH88603.1| musashi homolog 1 [Xenopus (Silurana) tropicalis]
Length = 340
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKVCD 168
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPT 193
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + T E LR YFS FG + + V +DP RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 147 S-HEICGQQVAIDSATP 162
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|297263669|ref|XP_001087753.2| PREDICTED: hypothetical protein LOC699286 [Macaca mulatta]
Length = 696
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 239 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 298
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 299 IHFHEINNKMVECKKAQPKEVMSPT 323
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 102 LRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSA 160
LR YF +FG + + V +DP RGFGFVTF ++ D+V +S HE+ + + A
Sbjct: 166 LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVA 225
Query: 161 TP 162
P
Sbjct: 226 FP 227
>gi|322798126|gb|EFZ19965.1| hypothetical protein SINV_80273 [Solenopsis invicta]
Length = 370
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
R + + R KKIFVG + Q+ ++++++ YF++FG++ + + D + HRGFGFVTF
Sbjct: 134 NRAKQANRT-KKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFE 192
Query: 136 EEVVADRVSR-RSHEICGQQVAIDSATPLDDAGP 168
E V DRV H I ++V A P + P
Sbjct: 193 NEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVQP 226
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 16/96 (16%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDP-------KRTG--------HRGFGF 131
K+FVG L + ++E LR YFS FG + DV + KDP R G RGFGF
Sbjct: 41 KLFVGGLSWQTSSEKLREYFSMFGTVTDVLIMKDPMTQTVLVHRAGSRLVRLQRSRGFGF 100
Query: 132 VTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDDA 166
+TFAE D+V + H + G+++ ATP + A
Sbjct: 101 ITFAEPGSVDKVLKCPIHTLDGKKIDPKHATPKNRA 136
>gi|383856328|ref|XP_003703661.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Megachile
rotundata]
Length = 316
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R + + R KKIFVG + Q+ ++E+++ YF++FG++ + + D + HRGFGFVTF
Sbjct: 120 RAKQANRT-KKIFVGGVSQDTSSEEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFEN 178
Query: 137 EVVADRVSR-RSHEICGQQVAIDSATP 162
E V DRV H I ++V A P
Sbjct: 179 EDVVDRVCEIHFHTIKNKKVECKKAQP 205
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + ++E LR YF FG + DV + KDP RGFGF+TFAE D+V +
Sbjct: 41 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 100
Query: 147 S-HEICGQQVAIDSATPLDDA 166
H + G+++ ATP + A
Sbjct: 101 PIHTLDGKKIDPKHATPKNRA 121
>gi|356547577|ref|XP_003542187.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 352
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L ++ T E +YF ++G I D + KD RGFGF+T+A+ V D+V +
Sbjct: 19 KIFIGGLAKDTTLETFVKYFEKYGEITDSVIMKDRHTGRPRGFGFITYADPSVVDQVIQE 78
Query: 147 SHEICGQQVAIDSATP 162
+H + G+QV I P
Sbjct: 79 NHVVNGKQVEIKRTIP 94
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG +P + ++L+ +FS++G++++ + +D RGFGF+ F E V D +
Sbjct: 106 KKIFVGGIPTSVSEDELKNFFSKYGKVVEHEIIRDHTTKRSRGFGFIVFDSEKVVDNILA 165
Query: 146 RSHEI--CGQQVAIDSATPLDDAGPS 169
+ I G QV I A P + P+
Sbjct: 166 DGNMIDMGGTQVEIKKAEPKKSSNPA 191
>gi|344285367|ref|XP_003414433.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Loxodonta
africana]
Length = 520
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 155 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 214
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 215 IHFHEINNKMVECKKAQP 232
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 100 EDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSH 148
+ LR YFS+FG I + V +DP RGFGFVTFA+ D+V + H
Sbjct: 80 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPH 128
>gi|354480942|ref|XP_003502662.1| PREDICTED: DAZ-associated protein 1-like [Cricetulus griseus]
Length = 495
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 66/128 (51%), Gaps = 11/128 (8%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R +SS+ KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +
Sbjct: 195 RSDSSK--SNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFED 252
Query: 137 EVVADR-VSRRSHEICGQQVAIDSATPLD-------DAGPSQNFMMNAAETFGGYGG-PM 187
E D+ V+ H+I G++V + A P D AG SQ A G+ G P
Sbjct: 253 EQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKNQAPGQAGASQWGSRVAPSAANGWAGQPP 312
Query: 188 RTYGRMYG 195
T+ + YG
Sbjct: 313 PTWQQGYG 320
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVS 144
+K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 99 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 158
Query: 145 RRSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 159 SRPHTLDGRNIDPKPCTP 176
>gi|1465873|dbj|BAA07211.1| Bmsqd-2 [Bombyx mori]
Length = 303
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + +++R +FS FG IL+V +P D + +GF F+TF +E+VV D +
Sbjct: 124 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 183
Query: 146 RSHEICGQQVAIDSATPLDD 165
I G++V + ATP D
Sbjct: 184 PKRTIGGKEVDVKRATPKPD 203
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
+K+FVG L E T ++LR +F + I + V P RGF F+ F A E + ++
Sbjct: 43 RKLFVGGLSWETTDKELRDHFGAYREIESINVKTVPNTGRSRGFAFIVFKAPESIDKVMA 102
Query: 145 RRSHEICGQQV 155
H I ++V
Sbjct: 103 AGEHTINNKKV 113
>gi|148683901|gb|EDL15848.1| Musashi homolog 2 (Drosophila), isoform CRA_c [Mus musculus]
Length = 296
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 78 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 137
Query: 146 -RSHEICGQQVAIDSATPLD 164
HEI + V A P +
Sbjct: 138 IHFHEINNKMVECKKAQPKE 157
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 98 TAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQVA 156
+ + LR YFS+FG I + V +DP RGFGFVTFA+ D+V + HE+ + +
Sbjct: 1 STDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTID 60
Query: 157 IDSATP 162
A P
Sbjct: 61 PKVAFP 66
>gi|332018477|gb|EGI59067.1| RNA-binding protein Musashi-like protein Rbp6 [Acromyrmex
echinatior]
Length = 369
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
R + + R KKIFVG + Q+ ++++++ YF++FG++ + + D + HRGFGFVTF
Sbjct: 119 NRAKQANRT-KKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFE 177
Query: 136 EEVVADRVSR-RSHEICGQQVAIDSATPLDDAGP 168
E V DRV H I ++V A P + P
Sbjct: 178 NEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVQP 211
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + ++E LR YF+ FG + DV + KDP RGFGF+TFAE D+V +
Sbjct: 41 KLFVGGLSWQTSSEKLREYFNMFGTVTDVLIMKDPMTQRSRGFGFITFAEPGSVDKVLKC 100
Query: 147 S-HEICGQQVAIDSATPLDDA 166
H + G+++ ATP + A
Sbjct: 101 PIHTLDGKKIDPKHATPKNRA 121
>gi|26341844|dbj|BAC34584.1| unnamed protein product [Mus musculus]
Length = 278
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 146 -RSHEICGQQVAIDSATPLDDAGP 168
HEI + V A P + P
Sbjct: 166 IHFHEINNKMVECKKAQPKEVMFP 189
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G SQ K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA
Sbjct: 7 GSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 66
Query: 136 EEVVADRVSRRSH 148
+ D+V + H
Sbjct: 67 DPASVDKVLGQPH 79
>gi|363741379|ref|XP_415912.3| PREDICTED: RNA-binding protein Musashi homolog 2 [Gallus gallus]
Length = 315
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 97 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 156
Query: 146 -RSHEICGQQVAIDSATPLDDAGP 168
HEI + V A P + P
Sbjct: 157 IHFHEINNKMVECKKAQPKEVMFP 180
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 105 YFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQVAIDSATP 162
+FS+FG I + V +DP RGFGFVTFA+ D+V ++ HE+ + + A P
Sbjct: 27 HFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPGSVDKVLAQPHHELDSKTIDPKVAFP 85
>gi|348562530|ref|XP_003467063.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cavia
porcellus]
Length = 285
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 67 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 126
Query: 146 -RSHEICGQQVAIDSATPLD 164
HEI + V A P +
Sbjct: 127 IHFHEINNKMVECKKAQPKE 146
>gi|449479911|ref|XP_004177058.1| PREDICTED: RNA-binding protein Musashi homolog 2 isoform 2
[Taeniopygia guttata]
Length = 251
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 146 -RSHEICGQQVAIDSATPLDDAGP 168
HEI + V A P + P
Sbjct: 166 IHFHEINNKMVECKKAQPKEVMFP 189
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA+ D+V ++
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 77
Query: 146 RSHEICGQQVAIDSATP 162
HE+ + + A P
Sbjct: 78 PHHELDSKTIDPKVAFP 94
>gi|390463506|ref|XP_002748435.2| PREDICTED: RNA-binding protein Musashi homolog 2, partial
[Callithrix jacchus]
Length = 295
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 77 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 136
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 137 IHFHEINNKMVECKKAQP 154
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 99 AEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQVAI 157
+ LR YFS+FG I + V +DP RGFGFVTFA+ D+V + HE+ + +
Sbjct: 1 TDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDP 60
Query: 158 DSATP 162
A P
Sbjct: 61 KVAFP 65
>gi|395531900|ref|XP_003768011.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Sarcophilus
harrisii]
Length = 345
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 109 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 169 IHFHEINNKMVECKKAQP 186
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%)
Query: 81 SQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVA 140
SQ K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA+
Sbjct: 15 SQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASV 74
Query: 141 DRVSRRSHE 149
D+V + H
Sbjct: 75 DKVLAQPHH 83
>gi|312104391|ref|XP_003150391.1| hypothetical protein LOAG_14850 [Loa loa]
Length = 104
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KK+F+G L +T ED++ YF ++G++ D + D HRGFGF+TF + V+D+V
Sbjct: 25 KKVFIGGLSATSTLEDMKNYFEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDDVSDKVCE 84
Query: 146 -RSHEICGQQVAIDSATP 162
HEI G+ V A P
Sbjct: 85 IHFHEINGKMVECKKAQP 102
>gi|256080309|ref|XP_002576424.1| tar DNA-binding protein [Schistosoma mansoni]
gi|350645465|emb|CCD59817.1| tar DNA-binding protein, putative [Schistosoma mansoni]
Length = 321
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q + +K+ +GRL ++ + E LR++FS++GR+ DV++PK R F F+TF + VA
Sbjct: 95 QEVSRKVHIGRLTEDISPEALRQHFSQYGRVCDVFIPKP-----FRSFAFITFDDPEVAA 149
Query: 142 RVSRRSHEICGQQVAIDSATP 162
+ + EI G ++++ SA P
Sbjct: 150 SLLGKDQEIQGVRISVGSAVP 170
Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
++ + V LP A + LR YFS++G ++ + + +DP +G+GF+ FA+
Sbjct: 8 KKTCTDLIVLNLPWRADEDTLRDYFSQYGDLVMIQIKRDPVTQQSKGYGFIRFADYTAQV 67
Query: 142 RVSRRSHEICGQQVAI 157
H I +Q +
Sbjct: 68 MCLAERHTIENRQCDV 83
>gi|303273468|ref|XP_003056095.1| RNA recognition motif family protein [Micromonas pusilla CCMP1545]
gi|226462179|gb|EEH59471.1| RNA recognition motif family protein [Micromonas pusilla CCMP1545]
Length = 232
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV- 143
G KIFVG L + +R +F +FG +++V V +DP RGFGF+TF + A +V
Sbjct: 10 GSKIFVGGLDRSVDEGVVRSFFQQFGPVVEVLVMRDPHNHQSRGFGFITFQRDDSAKQVL 69
Query: 144 SRRSHEICGQQVAIDSATPLDDAGPSQ 170
R H++ G++V + SA P A P Q
Sbjct: 70 QNRYHDMMGKRVEVKSAVPRGQAPPPQ 96
>gi|297744195|emb|CBI37165.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP T E R+YF +G + DV V D RGFGF++F E DRV
Sbjct: 110 KKIFVGGLPSTLTEEGFRQYFETYGHVTDVVVMYDQNTQRPRGFGFISFDTEDAVDRVLH 169
Query: 146 RS-HEICGQQVAIDSATPLDDAGP 168
++ H++ G+ V + A P DA P
Sbjct: 170 KTFHDLNGKLVEVKRALP-KDANP 192
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG +P + T E L+ YF+++G + + +D RGFGFV FA+ V D V +
Sbjct: 7 KLFVGGIPWDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFADPSVLDAVLQE 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A ++ S+ N + G GG +T G L
Sbjct: 67 KHTIDGRTVEAKRALSREEQHTSRPGNSNTGRSSSGMGGNFKTKKIFVGGL 117
>gi|47086453|ref|NP_997961.1| musashi homolog 2a [Danio rerio]
gi|28374420|gb|AAH45335.1| Musashi homolog 2a (Drosophila) [Danio rerio]
gi|182889228|gb|AAI64813.1| Msi2 protein [Danio rerio]
Length = 388
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 110 KKIFVGGLSASTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDIVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 170 IHFHEINNKMVECKKAQP 187
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G SQ K+F+G L + + + LR YF +FG I + V +DP RGFGF+TFA
Sbjct: 11 GSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFITFA 70
Query: 136 EEVVADRVSRRSHE 149
+ D+V + H
Sbjct: 71 DVSSVDKVLAQPHH 84
>gi|348041339|ref|NP_001231688.1| TAR DNA-binding protein 43 isoform 3 [Xenopus (Silurana)
tropicalis]
Length = 247
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ +AE+LR++FS++G ++DV++PK R F FVTFA++ VA +
Sbjct: 29 RKVFVGRCTEDMSAEELRQFFSQYGEVVDVFIPKP-----FRAFAFVTFADDQVAQSLCG 83
Query: 146 RSHEICGQQVAIDSATP 162
I G V + +A P
Sbjct: 84 EDLIIKGVSVHVSTAEP 100
>gi|198452963|ref|XP_002137572.1| GA26466 [Drosophila pseudoobscura pseudoobscura]
gi|198132154|gb|EDY68130.1| GA26466 [Drosophila pseudoobscura pseudoobscura]
Length = 354
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
+KIF+G LP + T E LR +FS+FG + D V +DP RGFGFVTF + + V S
Sbjct: 13 RKIFIGGLPTQTTPETLREFFSKFGAVADAVVMRDPVSNHSRGFGFVTFVDPGSVENVQS 72
Query: 145 RRSHEICGQQVAIDSATP 162
R H I + V A P
Sbjct: 73 TRPHIIDCKTVETKPALP 90
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KIF+G L +R YFS+FG ++ V V D + RGFGF+ F + A+R
Sbjct: 106 NKIFLGGLKDCHDEPMIRDYFSKFGTVMSVKVLIDKETGRKRGFGFLEFEDIDSAERALV 165
Query: 146 RS-HEICGQQVAIDSATPLDDAGPSQNFMMNAAETFG 181
S H I V + +T D G F M A G
Sbjct: 166 LSKHVINFIAVEVKKSTQRPDPGKRLRFPMGGAARAG 202
>gi|1209409|emb|CAA90716.1| hnRNP protein [Chironomus tentans]
Length = 297
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG L E + +++R YF++FG I+++ +P D ++ + F F+TF E V + + +
Sbjct: 121 KIFVGGLIPEISDDEIRAYFAQFGNIVEMEMPFDKQKNQRKAFCFITFDSETVVNELLKT 180
Query: 147 SHE-ICGQQVAIDSATPLDDAGPSQNF 172
+ I G++V + ATP D P N
Sbjct: 181 PKQTISGKEVDVKKATPKPDNAPMMNI 207
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 76 GRGESSQRIGK----KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGF 131
G G+SS+ IG+ K+FVG L E T ++LR +F ++G I + V DP RGF F
Sbjct: 27 GGGDSSE-IGRDDDRKLFVGGLSWETTEKELRDHFGQYGEIDSINVKTDPTTGRSRGFAF 85
Query: 132 VTFAEEVVADR-VSRRSHEICGQQV 155
+ + D+ V+ H I ++V
Sbjct: 86 IVYKSADSIDKVVAAGDHIINNKKV 110
>gi|212276326|ref|NP_001130962.1| Ribonucleoprotein like protein isoform 1 [Zea mays]
gi|194690564|gb|ACF79366.1| unknown [Zea mays]
gi|195616124|gb|ACG29892.1| ribonucleoprotein like protein [Zea mays]
gi|224030751|gb|ACN34451.1| unknown [Zea mays]
gi|414592149|tpg|DAA42720.1| TPA: Ribonucleoprotein like protein isoform 1 [Zea mays]
gi|414592150|tpg|DAA42721.1| TPA: Ribonucleoprotein like protein isoform 2 [Zea mays]
Length = 370
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KK+FVG L + T E+ R YF FG + DV V D RGFGFVTF E +V R
Sbjct: 137 KKVFVGGLQDDTTEEEFRAYFETFGTVTDVAVIYDSATNRSRGFGFVTFDSEEAVGKVMR 196
Query: 146 RS-HEICGQQVAIDSATPLDD 165
+S H++ G +V A P D+
Sbjct: 197 QSFHDLNGTKVEAKIAIPKDE 217
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADR-- 142
+K+FVG +P A DLR +F+RFG + V V +D + TGH RGFGFV F ++ A
Sbjct: 8 RKLFVGGIPAGAQEADLRAHFARFGEVRSVVVMRD-RETGHGRGFGFVEFEDKAAAAAAA 66
Query: 143 ----VSRRSHEICGQQVAIDSA 160
R H +CG+ V + A
Sbjct: 67 ALGDADRPRHFLCGRAVDVKRA 88
>gi|302780479|ref|XP_002972014.1| hypothetical protein SELMODRAFT_172407 [Selaginella moellendorffii]
gi|302781554|ref|XP_002972551.1| hypothetical protein SELMODRAFT_172861 [Selaginella moellendorffii]
gi|300160018|gb|EFJ26637.1| hypothetical protein SELMODRAFT_172861 [Selaginella moellendorffii]
gi|300160313|gb|EFJ26931.1| hypothetical protein SELMODRAFT_172407 [Selaginella moellendorffii]
Length = 167
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG + E T E L+ YF +G +++ + KD RGFGFV FA+ VADRV +
Sbjct: 7 KIFVGGVSWETTDEKLKEYFQSYGDVVEAMIMKDRTTGRGRGFGFVVFADPDVADRVVQD 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFM 173
H I G+ V A P D+ ++ F+
Sbjct: 67 KHSINGKLVEAKKAVPRDEHQNAKIFV 93
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG L + E+ ++YF +FG I D+ V D RGFGF+TF E D V ++
Sbjct: 90 KIFVGGLAPNVSEEEFKQYFEQFGNITDIVVMYDHATQRPRGFGFITFDSEEAVDSVLQK 149
Query: 147 S-HEICGQQVAIDSATP 162
+ HE+ + V + A P
Sbjct: 150 TFHELKDKMVEVKRAVP 166
>gi|337451|gb|AAA36575.1| hnRNP type A/B protein [Homo sapiens]
gi|228098|prf||1717217A hnRNP protein A/B
Length = 284
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 86 KKIFVGRL-PQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV- 143
KKIFVG L P+ T E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 152 KKIFVGGLNPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVL 211
Query: 144 SRRSHEICGQQVAIDSATPLD 164
++ H + G + I A P +
Sbjct: 212 EKKFHTVSGSKCEIKVAQPKE 232
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG ++D + DP RGFGF+ F + ++V +
Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 128
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 129 KEHRLDGRVI 138
>gi|327284916|ref|XP_003227181.1| PREDICTED: RNA-binding protein Musashi homolog 2-like, partial
[Anolis carolinensis]
Length = 438
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 143 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 202
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 203 IHFHEINNKMVECKKAQP 220
>gi|390608551|dbj|BAM21252.1| RRM-containing protein [Ephydatia fluviatilis]
Length = 431
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
K+IFVG L ++T DL+ YF FG I DV + D + HRGFGFVTF E A++V S
Sbjct: 150 KRIFVGGLSSDSTEMDLQEYFQEFGTIQDVQLMYDRNTSRHRGFGFVTFDSEKPAEKVCS 209
Query: 145 RRSHEICGQQVAIDSA 160
+ H+I G++V + A
Sbjct: 210 IQYHDIRGKKVEVKVA 225
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
KIFVG L + ++E L YF+RFG +L+ + +DP RGFGF+TF + +V
Sbjct: 51 KIFVGGLSWQTSSEKLAEYFARFGEVLECNIMRDPSTRRSRGFGFITFKDPASVSKV 107
>gi|169613076|ref|XP_001799955.1| hypothetical protein SNOG_09668 [Phaeosphaeria nodorum SN15]
gi|160702644|gb|EAT82933.2| hypothetical protein SNOG_09668 [Phaeosphaeria nodorum SN15]
Length = 453
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 79 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEV 138
E +R KIFVG + QEAT ED +F FGR++D + D + RGFGFVTF +
Sbjct: 104 EEQERT-SKIFVGGVSQEATEEDFTNFFKSFGRVVDATLMMDKETGRPRGFGFVTFDGDA 162
Query: 139 VADRVSRRSHEICGQQVAIDSATP 162
D R+ +I G+ + + A P
Sbjct: 163 AVDATLRQPLQILGKPIEVKRAQP 186
Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 100 EDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDS 159
E L+ YFS+FG + + V +D RGFGF+TF + + V + H + G+ +
Sbjct: 40 ESLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKCVNTVMVKEHYLDGKIIDPKR 99
Query: 160 ATPLDD 165
A P ++
Sbjct: 100 AIPREE 105
>gi|344243397|gb|EGV99500.1| DAZ-associated protein 1 [Cricetulus griseus]
Length = 365
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 66/128 (51%), Gaps = 11/128 (8%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R +SS+ KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +
Sbjct: 65 RSDSSK--SNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFED 122
Query: 137 EVVADR-VSRRSHEICGQQVAIDSATPLD-------DAGPSQNFMMNAAETFGGYGG-PM 187
E D+ V+ H+I G++V + A P D AG SQ A G+ G P
Sbjct: 123 EQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKNQAPGQAGASQWGSRVAPSAANGWAGQPP 182
Query: 188 RTYGRMYG 195
T+ + YG
Sbjct: 183 PTWQQGYG 190
>gi|426238559|ref|XP_004013218.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Ovis aries]
Length = 343
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 125 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 184
Query: 146 -RSHEICGQQVAIDSATPLDDAGP 168
HEI + V A P + P
Sbjct: 185 IHFHEINNKMVECKKAQPKEVMFP 208
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 103 RRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHE 149
R YFS+FG I + V +DP RGFGFVTFA+ D+V + H
Sbjct: 53 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHH 99
>gi|148683902|gb|EDL15849.1| Musashi homolog 2 (Drosophila), isoform CRA_d [Mus musculus]
Length = 250
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 78 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 137
Query: 146 -RSHEICGQQVAIDSATPLDDAGP 168
HEI + V A P + P
Sbjct: 138 IHFHEINNKMVECKKAQPKEVMFP 161
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 98 TAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSH 148
+ + LR YFS+FG I + V +DP RGFGFVTFA+ D+V + H
Sbjct: 1 STDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPH 51
>gi|56682935|ref|NP_001003898.1| TAR DNA-binding protein 43 isoform 5 [Mus musculus]
gi|26337419|dbj|BAC32395.1| unnamed protein product [Mus musculus]
gi|33086852|gb|AAP92689.1| TARDBP S7 [Mus musculus]
gi|148682888|gb|EDL14835.1| mCG16669, isoform CRA_f [Mus musculus]
gi|257222466|gb|ACV52543.1| TDP-43 variant 5 [Mus musculus]
Length = 298
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 11/111 (9%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK-----PFRAFAFVTFADDKVAQSLC 244
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 195
I G V I +A P ++ N + + FG G P+ +YG
Sbjct: 245 GEDLIIKGISVHISNAEPKHNS----NRQLERSGRFG--GNPVHLISNVYG 289
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|195149343|ref|XP_002015617.1| GL10927 [Drosophila persimilis]
gi|198462059|ref|XP_001352323.2| GA10247 [Drosophila pseudoobscura pseudoobscura]
gi|194109464|gb|EDW31507.1| GL10927 [Drosophila persimilis]
gi|198139765|gb|EAL29286.2| GA10247 [Drosophila pseudoobscura pseudoobscura]
Length = 540
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
++ K+FVGR ++ ++DLR YFS+FG + DV++P+ R F FVTF + VA
Sbjct: 188 HQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRP-----FRAFSFVTFFDPDVAQ 242
Query: 142 RVSRRSHEICGQQVAIDSATPLDDAGPS---QNFMMNAAETFG 181
+ H I G V + +A P + S QN+ ++ ++G
Sbjct: 243 SLCGEDHIIKGVSVHVSNAAPKAEQSRSHQGQNYNYSSGNSYG 285
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E+ R I +G LP + T + LR YF +G +L + KD K +GFGFV F
Sbjct: 99 RIETRLRCTDLIVLG-LPWKTTEDSLREYFESYGEVLMAQIKKDVKSGQSKGFGFVRFGS 157
Query: 137 EVVADRVSRRSHEICGQQVAI 157
RV H I G+ +
Sbjct: 158 YDAQMRVLSNRHLIDGRWCEV 178
>gi|86824038|gb|AAI05528.1| TAR DNA binding protein [Bos taurus]
Length = 298
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 11/111 (9%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPK-----PFRAFAFVTFADDQVAQSLC 244
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 195
I G V I +A P ++ N + + FG G P+ +YG
Sbjct: 245 GEDLIIKGISVHISNAEPKHNS----NRQLERSGRFG--GNPVHLISNVYG 289
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDIK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|361131862|gb|EHL03497.1| putative Uncharacterized RNA-binding protein [Glarea lozoyensis
74030]
Length = 467
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG + QEAT +D ++YF +FGR++D + D RGFGFVTF E +
Sbjct: 84 KIFVGGVSQEATEQDFKQYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVEACLEG 143
Query: 147 SHEICGQQVAIDSATP 162
EI G+ + + A P
Sbjct: 144 PLEILGKPIEVKKAQP 159
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+F+G L E T E L+ YFS+FG +L+ V +D RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDESLKEYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVKE 60
Query: 148 HEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|341894622|gb|EGT50557.1| CBN-HRP-1 protein [Caenorhabditis brenneri]
Length = 343
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD-RVS 144
+KIFVG L T E +R ++S+FG I D+ V +DP RGFGFVTF + D +
Sbjct: 23 RKIFVGGLTSNTTDELMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFTGKTEVDAAMK 82
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQ 170
+R H I G+ V A P DD S+
Sbjct: 83 QRPHVIDGKTVDPKRAVPRDDKNRSE 108
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
K+++V + ++ T + L YFS++G ++ + D RGFGFVTF + D+ V
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFSKYGNVVKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG 182
++SH + G + + D+ +Q M E+ GG
Sbjct: 174 QKSHMVNGHRCDVRKGLSKDEMNKAQ--MNRDRESRGG 209
>gi|148682886|gb|EDL14833.1| mCG16669, isoform CRA_d [Mus musculus]
Length = 300
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 11/111 (9%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 192 SRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK-----PFRAFAFVTFADDKVAQSLC 246
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 195
I G V I +A P ++ N + + FG G P+ +YG
Sbjct: 247 GEDLIIKGISVHISNAEPKHNS----NRQLERSGRFG--GNPVHLISNVYG 291
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 103 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 160
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 161 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 188
>gi|256080305|ref|XP_002576422.1| tar DNA-binding protein [Schistosoma mansoni]
Length = 446
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q + +K+ +GRL ++ + E LR++FS++GR+ DV++PK R F F+TF + VA
Sbjct: 191 QEVSRKVHIGRLTEDISPEALRQHFSQYGRVCDVFIPKP-----FRSFAFITFDDPEVAA 245
Query: 142 RVSRRSHEICGQQVAIDSATP 162
+ + EI G ++++ SA P
Sbjct: 246 SLLGKDQEIQGVRISVGSAVP 266
Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
++ + V LP A + LR YFS++G ++ + + +DP +G+GF+ FA+
Sbjct: 104 KKTCTDLIVLNLPWRADEDTLRDYFSQYGDLVMIQIKRDPVTQQSKGYGFIRFADYTAQV 163
Query: 142 RVSRRSHEICGQQVAI 157
H I +Q +
Sbjct: 164 MCLAERHTIENRQCDV 179
>gi|307178992|gb|EFN67508.1| RNA-binding protein squid [Camponotus floridanus]
Length = 327
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + +D++ +FS+FG I++V +P D + +GF F+TF +E+VV + +
Sbjct: 127 KIFVGGLSTELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 186
Query: 146 RSHEICGQQVAIDSATPLDD 165
I G++V + ATP D
Sbjct: 187 SKQTINGKEVDVKKATPKPD 206
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+K+FVG L E T ++LR +FS +G I + V DP RGF F+ FA+ D++
Sbjct: 46 RKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKI 103
>gi|224065561|ref|XP_002301858.1| predicted protein [Populus trichocarpa]
gi|222843584|gb|EEE81131.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP T + R+YF +G + DV V D + RGFGF+TF E D V +
Sbjct: 92 KKIFVGGLPSTVTEDGFRQYFQSYGHVNDVVVMYDQQTQRPRGFGFITFDSEDAVDNVLQ 151
Query: 146 RS-HEICGQQVAIDSATPLDDAGP 168
++ HE+ G+ V + A P DA P
Sbjct: 152 KTFHELNGKLVEVKRALP-KDANP 174
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + + T + LR +F+++G + V + +D RGFGFV F++ V D V
Sbjct: 7 KLFVGGIAWDTTEDTLRDHFNQYGEVSQVVIMRDKTTGRPRGFGFVVFSDPSVLDPVLHD 66
Query: 147 SHEICGQQVAI 157
H I G+ V I
Sbjct: 67 KHTIDGRTVII 77
>gi|357521485|ref|XP_003631031.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
gi|355525053|gb|AET05507.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
Length = 476
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+KIFVG L T D ++YF +FG I DV V D RGFGF+T+ E D+V
Sbjct: 89 RKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLL 148
Query: 146 RS-HEICGQQVAIDSATP 162
++ HE+ G+ V + A P
Sbjct: 149 KTFHELNGKMVEVKRAVP 166
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 100 EDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDS 159
+ LR YFS +G + + + KD RGFGFV F + VAD V + H I G+ V
Sbjct: 3 DGLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVFIDPAVADIVVQEKHNIDGRMVEAKK 62
Query: 160 ATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
A P DD QN + + + G GP RT G L
Sbjct: 63 AVPRDD----QNVLSRTSGSIHGSPGPGRTRKIFVGGL 96
>gi|417409049|gb|JAA51051.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 252
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEV--VADRV 143
KKIFVG L EAT E++R YF FG I + +P DPK RGF F+TF EE V +
Sbjct: 121 KKIFVGGLNPEATEEEIREYFGEFGEIEAIDLPMDPKSHKRRGFVFITFKEEEEPVRKAL 180
Query: 144 SRRSHEICGQQVAIDSATP 162
++ H I + I A P
Sbjct: 181 EKKFHTIGASKCEIKVALP 199
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + DL+ YFS+FG ++D + DP RGFGF+ F + ++V +
Sbjct: 38 KMFVGGLSWDTSKNDLKDYFSKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 97
Query: 146 RSHEICGQQV 155
+ H + G+ +
Sbjct: 98 KEHRLDGRVI 107
>gi|171451950|dbj|BAG15903.1| musashi [Dugesia japonica]
Length = 473
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIF+G + +T E++R+YF+R+G + + + D HRGFGFVTF +E VA+++ +
Sbjct: 134 KKIFIGGIATSSTVEEIRQYFNRYGEVENCELMMDKATNRHRGFGFVTFLDEDVAEQICQ 193
Query: 146 -RSHEICGQQVAIDSATP 162
H I + V A P
Sbjct: 194 IHYHNINNKMVEAKKALP 211
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T+E L+ YFS+FG I + V +D RGFGFVTF + V + +
Sbjct: 44 KLFVGGLNPTTTSEALQSYFSQFGEIKEFMVMRDIVHKRSRGFGFVTFTDYNGVIKVLKQ 103
Query: 146 RSHEICGQQVAIDSATPLDDAGPSQ 170
+H + +++ A P P +
Sbjct: 104 ENHILDSKKIDPKLAVPKSICQPEK 128
>gi|256080303|ref|XP_002576421.1| tar DNA-binding protein [Schistosoma mansoni]
gi|350645466|emb|CCD59818.1| tar DNA-binding protein, putative [Schistosoma mansoni]
Length = 417
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q + +K+ +GRL ++ + E LR++FS++GR+ DV++PK R F F+TF + VA
Sbjct: 191 QEVSRKVHIGRLTEDISPEALRQHFSQYGRVCDVFIPKP-----FRSFAFITFDDPEVAA 245
Query: 142 RVSRRSHEICGQQVAIDSATP 162
+ + EI G ++++ SA P
Sbjct: 246 SLLGKDQEIQGVRISVGSAVP 266
Score = 43.5 bits (101), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
++ + V LP A + LR YFS++G ++ + + +DP +G+GF+ FA+
Sbjct: 104 KKTCTDLIVLNLPWRADEDTLRDYFSQYGDLVMIQIKRDPVTQQSKGYGFIRFADYTAQV 163
Query: 142 RVSRRSHEICGQQVAI 157
H I +Q +
Sbjct: 164 MCLAERHTIENRQCDV 179
>gi|294610680|ref|NP_083246.1| RNA binding motif 31, Y-linked [Mus musculus]
gi|377834528|ref|XP_003689488.1| PREDICTED: uncharacterized protein LOC100861987 [Mus musculus]
gi|377836568|ref|XP_003689057.1| PREDICTED: uncharacterized protein LOC100861987 [Mus musculus]
gi|12856118|dbj|BAB30571.1| unnamed protein product [Mus musculus]
gi|148686366|gb|EDL18313.1| mCG53108 [Mus musculus]
Length = 565
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 81 SQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVA 140
+Q+ K+F+G L QE + + L Y S+FG I+D + DP RGFGFV F +
Sbjct: 28 NQQDASKMFIGGLSQEMSKQVLLEYLSKFGEIIDFIIKTDPNTGLSRGFGFVLFKDSATV 87
Query: 141 DRVSR-RSHEICGQQVAIDSATPLDDAGPSQNFMM 174
++V + + H++ G+++ A L+ P++ +
Sbjct: 88 EKVLQVKDHKVDGKKIEFKRAKALESQFPNKKIFV 122
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
+ SQ KKIFVG L + E +R YF FG+I + +P R FGF+ +
Sbjct: 108 AKALESQFPNKKIFVGGLNPRLSEEKIRAYFGTFGQIEAIELPLCSDTRERRAFGFIKYM 167
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATPLDD 165
+E +V R H I + + A P ++
Sbjct: 168 DENSVRKVLENRYHFIGSSRCEVKMAYPKEN 198
>gi|402887861|ref|XP_003907299.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Papio anubis]
Length = 637
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 384 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 443
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 444 IHFHEINNKMVECKKAQPKEVMSPT 468
>gi|350645464|emb|CCD59816.1| tar DNA-binding protein, putative [Schistosoma mansoni]
Length = 450
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q + +K+ +GRL ++ + E LR++FS++GR+ DV++PK R F F+TF + VA
Sbjct: 191 QEVSRKVHIGRLTEDISPEALRQHFSQYGRVCDVFIPKP-----FRSFAFITFDDPEVAA 245
Query: 142 RVSRRSHEICGQQVAIDSATP 162
+ + EI G ++++ SA P
Sbjct: 246 SLLGKDQEIQGVRISVGSAVP 266
Score = 43.5 bits (101), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
++ + V LP A + LR YFS++G ++ + + +DP +G+GF+ FA+
Sbjct: 104 KKTCTDLIVLNLPWRADEDTLRDYFSQYGDLVMIQIKRDPVTQQSKGYGFIRFADYTAQV 163
Query: 142 RVSRRSHEICGQQVAI 157
H I +Q +
Sbjct: 164 MCLAERHTIENRQCDV 179
>gi|449444504|ref|XP_004140014.1| PREDICTED: uncharacterized protein LOC101222391 [Cucumis sativus]
gi|449505107|ref|XP_004162378.1| PREDICTED: uncharacterized protein LOC101227668 [Cucumis sativus]
Length = 476
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + + + L+ YF+ +G +++ + KD RGFGF+ FA+ VADRV R
Sbjct: 7 KLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVADRVIRE 66
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I G+ V A P +D QN + + + GP RT G L
Sbjct: 67 KHNIDGRMVEAKRAVPRND----QNIVGRTSGSINVSPGPGRTRKIFVGGL 113
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
+KIFVG L T + + YF +FG I DV V D RGFGF+T+ +EE V +
Sbjct: 106 RKIFVGGLASTVTESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLI 165
Query: 145 RRSHEICGQQVAIDSATPLD-DAGPSQ 170
+ HE+ G+ V + A P + GPS+
Sbjct: 166 KTFHELNGKMVEVKRAVPKELSPGPSR 192
>gi|425766220|gb|EKV04844.1| Heterogeneous nuclear ribonucleoprotein HRP1 [Penicillium digitatum
PHI26]
gi|425779142|gb|EKV17231.1| Heterogeneous nuclear ribonucleoprotein HRP1 [Penicillium digitatum
Pd1]
Length = 447
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q KIFVG + QEAT +D +++F +FGR++D + D RGFGFVTF + +
Sbjct: 77 QEKTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMMDKDTGRPRGFGFVTFDGDAAVE 136
Query: 142 RVSRRSHEICGQQVAIDSATP 162
+ R EI G+ + + A P
Sbjct: 137 KALSRPLEILGKPIEVKKAQP 157
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 100 EDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDS 159
E LR YFS+FG + + V +D RGFGF+TF + + V + H + G+ +
Sbjct: 11 ESLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDAKTVNTVMVKEHYLDGKIIDPKR 70
Query: 160 ATPLDD 165
A P D+
Sbjct: 71 AIPRDE 76
>gi|209882765|ref|XP_002142818.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209558424|gb|EEA08469.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 211
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+KIFVG LP + + LRRYF +FG+I D + D K RGFGFVTF + D + R
Sbjct: 98 EKIFVGNLPTTCSQDILRRYFEQFGQISDCVMMCDKKSGVGRGFGFVTFTSTSIVDDIIR 157
Query: 146 R--SHEICGQQVAIDSATP 162
H I GQ V + A+P
Sbjct: 158 AYDEHYIDGQWVEVKRASP 176
>gi|148233348|ref|NP_001084040.1| musashi RNA-binding protein 1 [Xenopus laevis]
gi|214630|gb|AAA49919.1| pot. RNA-binding protein (nrp-1B); putative [Xenopus laevis]
Length = 347
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E++V
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKICD 168
Query: 145 RRSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPT 193
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + T E LR YFS FG + + V +DP RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 147 S-HEICGQQVAIDSATP 162
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|291401535|ref|XP_002717031.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D [Oryctolagus
cuniculus]
Length = 448
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 29/164 (17%)
Query: 50 NAYISAATRYAALGAPTL---------YDHPGSFYGRGESS---------QRIGKKIFVG 91
NA+ A ALG+PT+ + P +G SS QR K+F+G
Sbjct: 136 NAHPFRALDSWALGSPTVRTDFVQFPFFLQPSFNFGHSNSSPRHTEAAAAQREEWKMFIG 195
Query: 92 RLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SRRSHEI 150
L + T +DL+ YFS+FG ++D + DP RGFGFV F E D+V ++ H++
Sbjct: 196 GLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKL 255
Query: 151 CGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
G+ + A + P + + E FGG+G
Sbjct: 256 NGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 299
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 275 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 334
Query: 145 RRSHEI----CGQQVAID 158
++ H + C +VA+
Sbjct: 335 KKYHNVGLSKCEIKVAMS 352
>gi|347828861|emb|CCD44558.1| hypothetical protein [Botryotinia fuckeliana]
Length = 508
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 70/166 (42%), Gaps = 26/166 (15%)
Query: 3 KDQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAAL 62
KD +V +MV H L G V D T N+ S +++ L
Sbjct: 48 KDARTVNIVMVKEHYLDGKIVRPDLKT------------------FNNSLRSYPSKFLLL 89
Query: 63 GAPTLYDH------PGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVY 116
+ + H P R E Q KIFVG + Q+A+ +D + YF++FGR++D
Sbjct: 90 ASKGTHSHTTFKIDPKRAIPRDE--QERTSKIFVGGVSQDASEQDFKEYFTQFGRVVDAT 147
Query: 117 VPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 162
+ D RGFGFVTF E + EI G+ + + A P
Sbjct: 148 LMMDKDTGRPRGFGFVTFDSEAAVEACLEAPLEIHGKPIEVKKAQP 193
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+F+G L E T E L+ YFS+FG +L+ V +D RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDESLKDYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVKE 60
Query: 148 HEICGQQVAIDSAT 161
H + G+ V D T
Sbjct: 61 HYLDGKIVRPDLKT 74
>gi|295673172|ref|XP_002797132.1| heterogeneous nuclear ribonucleoprotein A1 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226282504|gb|EEH38070.1| heterogeneous nuclear ribonucleoprotein A1 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 642
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 70/165 (42%), Gaps = 18/165 (10%)
Query: 3 KDQDSVENLMVDTHELGGSTVVVDRAT-----PKEDDFRPVGRMSHGGYGAYNAYISAAT 57
KD +V +MV H L G V + + ++ P+ R S
Sbjct: 140 KDPKTVNTVMVKEHYLDGKIVGISFCNHYPQAKQAENTAPIWRAS-----------KLRL 188
Query: 58 RYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV 117
R + L T P R E Q KIFVG + QEAT +D +++F +FGR++D +
Sbjct: 189 RASRLTKGTQQIDPKRAIPRDE--QERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATL 246
Query: 118 PKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 162
D RGFGFVTF E + EI G+ + + A P
Sbjct: 247 MIDKDSGRPRGFGFVTFDSEAAVEATLSGPLEILGKPIEVKKAQP 291
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T + L+ YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 92 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 151
Query: 147 SHEICGQQVAIDSATPLDDAGPSQN 171
H + G+ V I A ++N
Sbjct: 152 EHYLDGKIVGISFCNHYPQAKQAEN 176
>gi|410915344|ref|XP_003971147.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Takifugu rubripes]
Length = 407
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGF+TF E + ++V
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 170 IHFHEINNKMVECKKAQP 187
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G SQ K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTF
Sbjct: 11 GSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFT 70
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATP 162
+ D+V +++ HE+ + + A P
Sbjct: 71 DAASVDKVLAQQHHELDSKTIDPKVAFP 98
>gi|348041333|ref|NP_989054.2| TAR DNA-binding protein 43 isoform 1 [Xenopus (Silurana)
tropicalis]
gi|123915948|sp|Q28F51.1|TADBP_XENTR RecName: Full=TAR DNA-binding protein 43; Short=TDP-43
gi|89269046|emb|CAJ81570.1| TAR DNA binding protein [Xenopus (Silurana) tropicalis]
Length = 409
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ +AE+LR++FS++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMSAEELRQFFSQYGEVVDVFIPKP-----FRAFAFVTFADDQVAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V + +A P
Sbjct: 246 EDLIIKGVSVHVSTAEP 262
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADRVSRR 146
+ V LP + T +DL+ YFS FG ++ V V KD K TGH +GFGFV FA+ +V +
Sbjct: 107 LIVLGLPWKTTEQDLKDYFSTFGEVIMVQVKKDAK-TGHSKGFGFVRFADYETQVKVMSQ 165
Query: 147 SHEICG 152
H I G
Sbjct: 166 RHMIDG 171
>gi|317142958|ref|XP_001819217.2| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 557
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q KIFVG + QEA +D +++F +FGR++D + D K TG RGFGFVTF E
Sbjct: 191 QEKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMID-KDTGRPRGFGFVTFDSEAAV 249
Query: 141 DRVSRRSHEICGQQVAIDSATP 162
+ R EI G+ + + A P
Sbjct: 250 EAALSRPLEILGKPIEVKKAQP 271
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T + L+ YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 112 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 171
Query: 147 SHEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 172 EHYLDGKIIDPKRAIPRDE 190
>gi|391863705|gb|EIT73005.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 545
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q KIFVG + QEA +D +++F +FGR++D + D K TG RGFGFVTF E
Sbjct: 179 QEKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMID-KDTGRPRGFGFVTFDSEAAV 237
Query: 141 DRVSRRSHEICGQQVAIDSATP 162
+ R EI G+ + + A P
Sbjct: 238 EAALSRPLEILGKPIEVKKAQP 259
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T + L+ YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 100 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 159
Query: 147 SHEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 160 EHYLDGKIIDPKRAIPRDE 178
>gi|148224084|ref|NP_001080489.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus laevis]
gi|27694771|gb|AAH43814.1| Hnrpab-prov protein [Xenopus laevis]
Length = 324
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEE-VVADRVS 144
KKIFVG L EA + +R YF FG I + +P DPK RGF F+TF EE V +
Sbjct: 148 KKIFVGGLNPEAGEDQIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKILE 207
Query: 145 RRSHEICGQQVAIDSATP 162
++ H + G + I A P
Sbjct: 208 KKFHNVSGSKCEIKIAQP 225
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV- 143
G K+FVG L + + +DL+ YF++FG + D + DP RGFGF+ F + D+V
Sbjct: 63 GVKMFVGGLSWDTSKKDLKDYFAKFGEVSDCTIKMDPNTGRSRGFGFILFKDAESVDKVL 122
Query: 144 SRRSHEICGQQV 155
+ H + G+ +
Sbjct: 123 EHKEHRLDGRLI 134
>gi|89271354|emb|CAJ83458.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
Length = 347
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF RFG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 114 NKIFVGGIPHNCGETELREYFKRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 173
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 174 MHFHDIMGKKVEVKRAEPRD 193
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|410915342|ref|XP_003971146.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Takifugu rubripes]
Length = 388
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGF+TF E + ++V
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 170 IHFHEINNKMVECKKAQP 187
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G SQ K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTF
Sbjct: 11 GSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFT 70
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATP 162
+ D+V +++ HE+ + + A P
Sbjct: 71 DAASVDKVLAQQHHELDSKTIDPKVAFP 98
>gi|256080307|ref|XP_002576423.1| tar DNA-binding protein [Schistosoma mansoni]
gi|350645467|emb|CCD59819.1| tar DNA-binding protein, putative [Schistosoma mansoni]
Length = 457
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q + +K+ +GRL ++ + E LR++FS++GR+ DV++PK R F F+TF + VA
Sbjct: 191 QEVSRKVHIGRLTEDISPEALRQHFSQYGRVCDVFIPKP-----FRSFAFITFDDPEVAA 245
Query: 142 RVSRRSHEICGQQVAIDSATP 162
+ + EI G ++++ SA P
Sbjct: 246 SLLGKDQEIQGVRISVGSAVP 266
Score = 43.5 bits (101), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
++ + V LP A + LR YFS++G ++ + + +DP +G+GF+ FA+
Sbjct: 104 KKTCTDLIVLNLPWRADEDTLRDYFSQYGDLVMIQIKRDPVTQQSKGYGFIRFADYTAQV 163
Query: 142 RVSRRSHEICGQQVAI 157
H I +Q +
Sbjct: 164 MCLAERHTIENRQCDV 179
>gi|255560757|ref|XP_002521392.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223539470|gb|EEF41060.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 412
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 6/115 (5%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-- 143
+KIFVG +P T ++L YFS +G I++ + D K RGFGFVTF E +++
Sbjct: 168 RKIFVGGIPPTLTEDELGEYFSVYGNIVEHQIMLDHKTGRSRGFGFVTFETEDSVEQIFS 227
Query: 144 SRRSHEICGQQVAIDSATPL---DDAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 195
+ R+HE+ G++V I A P D G S + + GGYG + G +YG
Sbjct: 228 TGRTHELGGKRVEIKKAVPKRNGGDYGSSGKYHTGFSNGAGGYGAGHNS-GGLYG 281
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 42/79 (53%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + E T E YFS+FG I D + +D RGFGFVTFA+ ADRV
Sbjct: 80 KLFVGGISWETTEETFTSYFSKFGEITDSVIMRDRHSGRPRGFGFVTFADLAAADRVLEE 139
Query: 147 SHEICGQQVAIDSATPLDD 165
H I + V + P ++
Sbjct: 140 DHIIDDRAVEVKRTVPREE 158
>gi|168003443|ref|XP_001754422.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168003449|ref|XP_001754425.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694524|gb|EDQ80872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694527|gb|EDQ80875.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 177
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADRVSR 145
KIF+G L + + ++L+ +F ++G I+D + KD + TGH RGFGFVTFA+ V D V
Sbjct: 2 KIFIGGLSWDTSTDNLQSHFKKYGEIIDAVIMKD-RSTGHPRGFGFVTFADPAVCDNVVL 60
Query: 146 RSHEICGQQVAIDSATPLDDAGPSQ 170
H I G+ V + P ++ S+
Sbjct: 61 DKHVIDGRTVEAKKSVPRENMAASK 85
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG +P T E+ + YF FG +++ + +D RGFGFVTF E+VV D ++
Sbjct: 90 KKIFVGGIPPSITDEEFKSYFGGFGSVVEHQIMQDHSTGRSRGFGFVTFDNEQVVEDILA 149
Query: 145 R-RSHEICGQQVA 156
+ HE+ G+QV+
Sbjct: 150 HGKMHELGGKQVS 162
>gi|410915346|ref|XP_003971148.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Takifugu rubripes]
Length = 328
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGF+TF E + ++V
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 170 IHFHEINNKMVECKKAQP 187
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G SQ K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTF
Sbjct: 11 GSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFT 70
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATP 162
+ D+V +++ HE+ + + A P
Sbjct: 71 DAASVDKVLAQQHHELDSKTIDPKVAFP 98
>gi|38174066|gb|AAH61336.1| TAR DNA-binding protein 43 [Xenopus (Silurana) tropicalis]
Length = 407
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ +AE+LR++FS++G ++DV++PK R F FVTFA++ VA +
Sbjct: 189 RKVFVGRCTEDMSAEELRQFFSQYGEVVDVFIPKP-----FRAFAFVTFADDQVAQSLCG 243
Query: 146 RSHEICGQQVAIDSATP 162
I G V + +A P
Sbjct: 244 EDLIIKGVSVHVSTAEP 260
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADRVSRR 146
+ V LP + T +DL+ YFS FG ++ V V KD K TGH +GFGFV FA+ +V +
Sbjct: 105 LIVLGLPWKTTEQDLKDYFSTFGEVIMVQVKKDAK-TGHSKGFGFVRFADYETQVKVMSQ 163
Query: 147 SHEICG 152
H I G
Sbjct: 164 RHMIDG 169
>gi|317142960|ref|XP_003189459.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 531
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q KIFVG + QEA +D +++F +FGR++D + D K TG RGFGFVTF E
Sbjct: 191 QEKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMID-KDTGRPRGFGFVTFDSEAAV 249
Query: 141 DRVSRRSHEICGQQVAIDSATP 162
+ R EI G+ + + A P
Sbjct: 250 EAALSRPLEILGKPIEVKKAQP 271
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T + L+ YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 112 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 171
Query: 147 SHEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 172 EHYLDGKIIDPKRAIPRDE 190
>gi|238501964|ref|XP_002382216.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus flavus
NRRL3357]
gi|83767075|dbj|BAE57215.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692453|gb|EED48800.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus flavus
NRRL3357]
Length = 445
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q KIFVG + QEA +D +++F +FGR++D + D K TG RGFGFVTF E
Sbjct: 79 QEKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMID-KDTGRPRGFGFVTFDSEAAV 137
Query: 141 DRVSRRSHEICGQQVAIDSATP 162
+ R EI G+ + + A P
Sbjct: 138 EAALSRPLEILGKPIEVKKAQP 159
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+F+G L E T + L+ YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 148 HEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|347963748|ref|XP_310701.5| AGAP000399-PA [Anopheles gambiae str. PEST]
gi|333467053|gb|EAA06653.5| AGAP000399-PA [Anopheles gambiae str. PEST]
Length = 363
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E+++ +F +FG I++V +P D ++ +GF F+TF +E+VV + +
Sbjct: 184 KIFVGGLTSEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELLKT 243
Query: 146 RSHEICGQQVAIDSATP 162
I G++V + ATP
Sbjct: 244 PKQTISGKEVDVKKATP 260
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVG L E + ++L+ +FS++G I + V DP RGF F+ + D+V
Sbjct: 103 RKLFVGGLSWETSDKELKEHFSQYGDIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA 162
Query: 146 RSHEICGQQ 154
S + +
Sbjct: 163 VSEHVINNK 171
>gi|148907387|gb|ABR16827.1| unknown [Picea sitchensis]
Length = 432
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 81/192 (42%), Gaps = 40/192 (20%)
Query: 7 SVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAPT 66
+V+ ++ D H + G V + RA P+E+ R NA S
Sbjct: 59 AVDRVLQDKHTIDGRQVELKRAVPREEHQR-------------NAQKS------------ 93
Query: 67 LYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH 126
GS G G + KKIFVG L T +D + YF +FG I DV V D
Sbjct: 94 -----GSNVGAGPRT----KKIFVGGLAPTVTEDDFKGYFEQFGTITDVVVMYDHISQRP 144
Query: 127 RGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG--- 182
RGFGF+TF E D+V ++ HE+ + V + A P + + S + A +G
Sbjct: 145 RGFGFITFDSEEAVDKVVMKNFHELHDKTVEVKRALPKEMSPGSARARSSPAGPYGNPQN 204
Query: 183 --YGGPMRTYGR 192
YG P GR
Sbjct: 205 SRYGAPQPPAGR 216
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADRVSR 145
K+F+G + E T E L+ YF +G +++ + +D K TG RGFGF+ F+E DRV +
Sbjct: 7 KVFIGGISWETTEETLKEYFKVYGDVVETVIMRD-KMTGRARGFGFIGFSEPTAVDRVLQ 65
Query: 146 RSHEICGQQVAIDSATPLDD 165
H I G+QV + A P ++
Sbjct: 66 DKHTIDGRQVELKRAVPREE 85
>gi|410915348|ref|XP_003971149.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 4
[Takifugu rubripes]
Length = 350
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGF+TF E + ++V
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 170 IHFHEINNKMVECKKAQP 187
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G SQ K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTF
Sbjct: 11 GSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFT 70
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATP 162
+ D+V +++ HE+ + + A P
Sbjct: 71 DAASVDKVLAQQHHELDSKTIDPKVAFP 98
>gi|356571134|ref|XP_003553735.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
2-like [Glycine max]
Length = 374
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L +E T ++F ++G I D + KD K RGFGF+T+A+ V D V
Sbjct: 45 KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDTVIED 104
Query: 147 SHEICGQQVAIDSATPLDDAG 167
+H I G+QV I P AG
Sbjct: 105 THIINGKQVEIKRTIPRGAAG 125
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG +P T ++ R +F+R+G + D + +D RGFGF+T+ +EE V D +S
Sbjct: 134 KKIFVGGIPSTVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITYDSEEAVDDLLS 193
Query: 145 RRSH-EICGQQVAIDSATP 162
+ E G QV I A P
Sbjct: 194 VGNKIEFAGAQVEIKKAEP 212
>gi|357618214|gb|EHJ71282.1| hypothetical protein KGM_11355 [Danaus plexippus]
Length = 297
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + ++E LR YF+ FG + DV + KDP RGFGF+TF E D+V +
Sbjct: 31 KLFVGGLSWQTSSEKLREYFAMFGAVTDVLIMKDPVTQRSRGFGFITFQEAASVDKVLAV 90
Query: 146 RSHEICGQQVAIDSATPLDDAGPSQN 171
H + G+++ ATP P++
Sbjct: 91 PVHTLDGKRIDPKHATPKSAPKPAKT 116
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS- 144
KKIFVG + Q+ +A+++R YF++FG + D + D + HRGFGFVTF E +RV
Sbjct: 117 KKIFVGGVGQDTSADEVRAYFAQFGAVEDAVMLMDQQTKRHRGFGFVTFHSEEAVERVCD 176
Query: 145 RRSHEICGQQVAIDSATP 162
H I ++V A P
Sbjct: 177 IHFHTIKNKKVECKRAQP 194
>gi|426220118|ref|XP_004004264.1| PREDICTED: TAR DNA-binding protein 43-like [Ovis aries]
Length = 283
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 60 RKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKP-----FRAFAFVTFADDQVAQSLCG 114
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 115 EDLIIKGISVHISNAEP 131
>gi|256080846|ref|XP_002576687.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
Length = 315
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVS 144
+K+F+G L T L+ ++S++G I+DV V KD + RGFGF+T+ E E+V +
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQA 76
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG-----PMRTYGRMYGSL 197
R HEI G+ V A P +D+ ++ M GG +R Y YG++
Sbjct: 77 NRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNI 134
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 56/146 (38%), Gaps = 43/146 (29%)
Query: 16 HELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAPTLYDHPGSFY 75
HE+ G TV RA P+ED P M+
Sbjct: 80 HEIDGKTVEAKRAMPREDSNSPESHMT--------------------------------- 106
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
K+FVG L ++ T E+LR YFS++G I + V + RGFGFVTF
Sbjct: 107 ---------VTKLFVGGLKKDVTHEELREYFSKYGNITECEVVAWKESGESRGFGFVTFD 157
Query: 136 EEVVADR-VSRRSHEICGQQVAIDSA 160
+ D+ + + H I + + A
Sbjct: 158 DYDPVDKAILYKPHHIGSSRADVKKA 183
>gi|242024531|ref|XP_002432681.1| RNA-binding protein squid, putative [Pediculus humanus corporis]
gi|212518151|gb|EEB19943.1| RNA-binding protein squid, putative [Pediculus humanus corporis]
Length = 295
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + ED+R +F +FG IL+V +P D ++ + F F+TF +E+V D + +
Sbjct: 114 KIFVGGLDVETSEEDIRNFFGQFGTILEVELPFDKQKNQQKNFCFITFESEQVTNDLLKQ 173
Query: 146 RSHEICGQQVAIDSATP 162
I G++V + A P
Sbjct: 174 PKQTINGKEVDVKKANP 190
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G ES+ +K+FVGRL E T ++LR +FS+FG I V V DP RGF F+ F
Sbjct: 23 GTTESTNNDDRKLFVGRLSWETTDKELREHFSQFGEIESVSVKTDPASGRSRGFAFIVFK 82
Query: 136 EEVVADRV 143
+ ++V
Sbjct: 83 DVESIEKV 90
>gi|225461983|ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis
vinifera]
gi|147768836|emb|CAN78130.1| hypothetical protein VITISV_036088 [Vitis vinifera]
Length = 348
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF- 134
G G+S KKIFVG +P T ++ + +FS++G++++ + +D + RGFGF+ F
Sbjct: 97 GSGQSKDFKTKKIFVGGVPSTVTEDEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFD 156
Query: 135 AEEVVADRVSRRSH-EICGQQVAIDSATPLDDAGP 168
+EEVV + +S+ + ++ G QV I A P + P
Sbjct: 157 SEEVVDEMISKGNMIDMAGTQVEIKKAEPKKASNP 191
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L ++ T ++F ++G I D + KD RGFGF+T+A+ V DRV
Sbjct: 20 KIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIED 79
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNF 172
+H I G+QV I P +G S++F
Sbjct: 80 THVINGKQVEIKRTIP-KGSGQSKDF 104
>gi|20977028|gb|AAM33247.1| mitotic phosphoprotein 39 [Xenopus laevis]
Length = 412
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ +AE+LR++FS++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 RKVFVGRCTEDMSAEELRQFFSQYGEVVDVFIPKP-----FRAFSFVTFADDQVAQSLCG 244
Query: 146 RSHEICGQQVAIDSATP 162
I G V + +A P
Sbjct: 245 EDLIIKGVSVHVSTAEP 261
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADRVS 144
+ + V LP + T +DL+ YFS FG ++ V V KD K TGH +GFGFV F E +V
Sbjct: 104 QDLIVLGLPWKTTEQDLKDYFSTFGEVIMVQVKKDAK-TGHSKGFGFVRFTEYETQVKVM 162
Query: 145 RRSHEICG 152
+ H I G
Sbjct: 163 SQRHMING 170
>gi|444509540|gb|ELV09335.1| DAZ-associated protein 1, partial [Tupaia chinensis]
Length = 391
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 66 TLYDHPGSFYGRGESSQRI----GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDP 121
L P + GR + R KIFVG +P +LR YF +FG + +V + D
Sbjct: 57 VLASRPHTLDGRNQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDA 116
Query: 122 KRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 164
++ RGFGF+TF +E D+ V+ H+I G++V + A P D
Sbjct: 117 EKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 160
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 146 RSHEICG 152
R H + G
Sbjct: 61 RPHTLDG 67
>gi|213513574|ref|NP_001133787.1| RNA-binding protein Musashi homolog 2 [Salmo salar]
gi|209155330|gb|ACI33897.1| RNA-binding protein Musashi homolog 2 [Salmo salar]
Length = 366
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGF+TF E V ++V
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFITFEGEDVVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATPLD 164
HEI + V A P +
Sbjct: 170 IHFHEINNKMVECKKAQPKE 189
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G SQ K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTFA
Sbjct: 11 GSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATP 162
+ D+V ++ HE+ + + A P
Sbjct: 71 DAASVDKVLAQPHHELDSKTIDPKVAFP 98
>gi|296089958|emb|CBI39777.3| unnamed protein product [Vitis vinifera]
Length = 293
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF- 134
G G+S KKIFVG +P T ++ + +FS++G++++ + +D + RGFGF+ F
Sbjct: 97 GSGQSKDFKTKKIFVGGVPSTVTEDEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFD 156
Query: 135 AEEVVADRVSRRSH-EICGQQVAIDSATPLDDAGP 168
+EEVV + +S+ + ++ G QV I A P + P
Sbjct: 157 SEEVVDEMISKGNMIDMAGTQVEIKKAEPKKASNP 191
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L ++ T ++F ++G I D + KD RGFGF+T+A+ V DRV
Sbjct: 20 KIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIED 79
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNF 172
+H I G+QV I P +G S++F
Sbjct: 80 THVINGKQVEIKRTIP-KGSGQSKDF 104
>gi|363807276|ref|NP_001242362.1| uncharacterized protein LOC100793209 [Glycine max]
gi|255636483|gb|ACU18580.1| unknown [Glycine max]
Length = 377
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L +E T ++F ++G I D + KD K RGFGF+T+A+ V D+V
Sbjct: 43 KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVIEE 102
Query: 147 SHEICGQQVAIDSATP 162
H I G+QV I P
Sbjct: 103 PHVINGKQVEIKRTIP 118
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG +P T ++ R +F+R+G + D + +D RGFGF+TF +EE V D +S
Sbjct: 130 KKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFESEEAVDDLLS 189
Query: 145 RRSH-EICGQQVAIDSATP 162
+ + G QV I A P
Sbjct: 190 MGNKIDFAGAQVEIKKAEP 208
>gi|242347894|gb|ACS92717.1| musashi-like protein 2L [Ambystoma mexicanum]
Length = 406
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGFVTF E V ++V
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFDQFGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 170 IHFHEINNKMVECKKAQP 187
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G +Q K+F+G L + + + LR YF +FG I + V +DP RGFGFVTFA
Sbjct: 11 GSPSDAQHDPGKMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATP 162
+ D+V ++ HE+ + + A P
Sbjct: 71 DPASVDKVLAQPHHELDSKTIDPKVAFP 98
>gi|339233086|ref|XP_003381660.1| heterogeneous nuclear ribonucleoprotein A1 [Trichinella spiralis]
gi|316979494|gb|EFV62286.1| heterogeneous nuclear ribonucleoprotein A1 [Trichinella spiralis]
Length = 322
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVS 144
+KIF+G + + EDLR ++S++G I DV V +DP RGFGFVT+A+ E V ++
Sbjct: 27 RKIFIGGITVNTSDEDLRTFYSKWGEITDVVVMRDPVSKRSRGFGFVTYADPEQVNAAMA 86
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGP-----MRTYGRMYGSLDF 199
R H I G++V A P D + + G +R Y YGS+
Sbjct: 87 ARPHLIDGKEVEPKRAMPKDVMNKPEAHISVKKVYISGIKDEHTEDMLREYFMQYGSVQE 146
Query: 200 DDWGYGMGSGR 210
D G+G+
Sbjct: 147 VDIKVDQGTGK 157
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS- 144
KK+++ + E T + LR YF ++G + +V + D RGF FVTF + DRV
Sbjct: 118 KKVYISGIKDEHTEDMLREYFMQYGSVQEVDIKVDQGTGKKRGFAFVTFDDYDPVDRVVL 177
Query: 145 RRSHEICGQQVAIDSA 160
+SH I ++ + A
Sbjct: 178 EKSHMIDNKRCDVKKA 193
>gi|309266922|ref|XP_003086896.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC237030
[Mus musculus]
gi|309271524|ref|XP_003085337.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC237030
[Mus musculus]
Length = 537
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 81 SQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVA 140
+Q+ K+F+G L QE + + Y S+FG I+D + DP RGFGFV F +
Sbjct: 28 NQQDASKMFIGGLSQEVNKQVVLEYLSKFGEIIDFIIKIDPNTGLSRGFGFVLFKDSATV 87
Query: 141 DRVSR-RSHEICGQQVAIDSATPLDDAGP 168
++V R + H++ G+++ + A L+ P
Sbjct: 88 EKVLRVKEHKVDGKKIEVKRAKALESQFP 116
Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
+ SQ KK+FVG L + E +R YF FG+I + +P R FGF+ +
Sbjct: 108 AKALESQFPIKKVFVGGLNPRMSEEKIRAYFGTFGQIEAIELPLCSDTQERRAFGFIKYK 167
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATPLDD 165
+E +V R H I + + A P ++
Sbjct: 168 DENPVRKVLETRYHFIGSSRCEVKIAYPKEN 198
>gi|321461997|gb|EFX73024.1| hypothetical protein DAPPUDRAFT_32116 [Daphnia pulex]
Length = 185
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
+K+F+G L + +AE LR YFS+FG + +V V KDP RGFGFVTFA+ D+V +
Sbjct: 2 RKMFIGGLSWQTSAEGLREYFSKFGDVTEVMVMKDPTTRRSRGFGFVTFADAASVDKVLA 61
Query: 145 RRSHEICGQQVAIDSATP 162
HE+ G+++ A P
Sbjct: 62 SAPHELDGKKIDPKVAFP 79
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L +T +D++ YF +FGR+ D + D + HRGF FVTF E V D+V
Sbjct: 91 KKIFVGGLSAPSTVDDVKGYFEQFGRVEDAMLMFDKQTNRHRGFAFVTFESEDVVDKVCE 150
Query: 146 -RSHEICGQQVAIDSATPLDDAGP 168
HEI + V A P + P
Sbjct: 151 IHFHEINNKMVECKKAQPKEVMLP 174
>gi|224135041|ref|XP_002327552.1| predicted protein [Populus trichocarpa]
gi|222836106|gb|EEE74527.1| predicted protein [Populus trichocarpa]
Length = 160
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + E T E YFS++G ++D + D RGFGFVTFA+ VADRV
Sbjct: 1 KLFVGGVSWETTEETFTNYFSKYGEVMDSVIMTDRHSGRPRGFGFVTFADPAVADRVLEE 60
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V + P +D
Sbjct: 61 DHVIDGRAVEVKRTVPRED 79
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-- 143
KKIFVG +P T ++L+ YFS +G I+D + D K RGFGFVTF E +++
Sbjct: 89 KKIFVGGIPPSLTEDELKEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDIEDAVEQIFS 148
Query: 144 SRRSHEICGQQV 155
R+HE+ G+QV
Sbjct: 149 EGRTHELGGKQV 160
>gi|380030870|ref|XP_003699062.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like, partial
[Apis florea]
Length = 185
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
R + + R KKIFVG + Q+ ++++++ YF++FG++ + + D + HRGFGFVTF
Sbjct: 54 NRAKQANRT-KKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFE 112
Query: 136 EEVVADRVSR-RSHEICGQQVAIDSATPLDDAGP 168
E V DRV H I ++V A P + P
Sbjct: 113 NEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVQP 146
>gi|154296333|ref|XP_001548598.1| hypothetical protein BC1G_12993 [Botryotinia fuckeliana B05.10]
Length = 627
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 70/166 (42%), Gaps = 26/166 (15%)
Query: 3 KDQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAAL 62
KD +V +MV H L G V D T N+ S +++ L
Sbjct: 168 KDARTVNIVMVKEHYLDGKIVRPDLKT------------------FNNSLRSYPSKFLLL 209
Query: 63 GAPTLYDH------PGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVY 116
+ + H P R E Q KIFVG + Q+A+ +D + YF++FGR++D
Sbjct: 210 ASEGTHSHTTFKIDPKRAIPRDE--QERTSKIFVGGVSQDASEQDFKEYFTQFGRVVDAT 267
Query: 117 VPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 162
+ D RGFGFVTF E + EI G+ + + A P
Sbjct: 268 LMMDKDTGRPRGFGFVTFDSEAAVEACLEAPLEIHGKPIEVKKAQP 313
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T E L+ YFS+FG +L+ V +D RGFGF+TF + + V +
Sbjct: 120 KMFIGGLNWETTDESLKDYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVK 179
Query: 147 SHEICGQQVAIDSAT 161
H + G+ V D T
Sbjct: 180 EHYLDGKIVRPDLKT 194
>gi|125572147|gb|EAZ13662.1| hypothetical protein OsJ_03579 [Oryza sativa Japonica Group]
Length = 312
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA-EEVVADRVS 144
+KIFVG LP AT + L+ YF++FG + V D RGFGF+ FA EE A +
Sbjct: 124 RKIFVGGLPVSATEKKLKEYFNKFGEVNRAIVVIDLNTKMPRGFGFIQFASEESTARALK 183
Query: 145 RRSHEICGQQVAIDSATP 162
+ H +CGQ V + A P
Sbjct: 184 KDKHFLCGQWVEVSLAMP 201
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
K+FVG +P + +LR FSRFG + V PK+ + RGF FV F
Sbjct: 30 KVFVGGVPLGTSESELRAQFSRFGTVAFVGAPKNKQTGAARGFAFVQFVN 79
>gi|157110304|ref|XP_001651043.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878767|gb|EAT42992.1| AAEL005515-PE [Aedes aegypti]
Length = 285
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E+++ +F +FG I++V +P D ++ +GF F+TF +E+VV + +
Sbjct: 117 KIFVGGLTTEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELLKT 176
Query: 146 RSHEICGQQVAIDSATPLDD 165
I G++V + ATP D
Sbjct: 177 PKQTISGKEVDVKKATPKPD 196
Score = 43.5 bits (101), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+K+FVG L E + ++L+ +F ++G I + V DP RGF F+ + D+V
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKV 93
>gi|55742017|ref|NP_001006737.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
gi|49522454|gb|AAH75497.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
Length = 362
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF RFG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 114 NKIFVGGIPHNCGETELREYFKRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 173
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 174 MHFHDIMGKKVEVKRAEPRD 193
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|451993278|gb|EMD85752.1| hypothetical protein COCHEDRAFT_113051, partial [Cochliobolus
heterostrophus C5]
Length = 168
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG + QEAT ED +F +FGR++D + D + RGFGFVTF + D R
Sbjct: 84 KIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLRG 143
Query: 147 SHEICGQQVAIDSATP 162
+I G+Q+ + A P
Sbjct: 144 PLQILGKQIEVKRAQP 159
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+F+G L E T + L+ YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTEDSLKGYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVKE 60
Query: 148 HEICGQQVAIDSATPLDD 165
H + G+ + A P ++
Sbjct: 61 HYLDGKIIDPKRAIPREE 78
>gi|452824817|gb|EME31817.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Galdieria
sulphuraria]
Length = 345
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADRVSR 145
K+FVG L E + LR YF +G + D + +D K TGH RGFGFVTF ++ VAD V+
Sbjct: 32 KVFVGGLSWETGEDSLRAYFEGYGEVADCVIMRD-KYTGHPRGFGFVTFQDDSVADLVAS 90
Query: 146 RSHEICGQQVAIDSATP 162
SH + G+QV A P
Sbjct: 91 LSHILDGRQVEAKKAVP 107
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR- 146
+FVG + + ED YF +FG +LD ++ D + RGFGF+TF D+V +
Sbjct: 124 LFVGGISSSCSDEDFLVYFQKFGAVLDAHIMYDHQTGKSRGFGFITFCSVEAVDKVFQTP 183
Query: 147 SHEICGQQVAIDSATPL-----------DDAGPSQNFMMNAAETFGGYGGPMR-----TY 190
H I G+ V + A P ++G N + E+F P + TY
Sbjct: 184 RHVIKGKVVEVKVAEPKHQSVESRKVKESESGTGYNSAVGKPESFKPAKSPYQCSEACTY 243
Query: 191 GRMYGSLDFD 200
G S FD
Sbjct: 244 GPFVNSFVFD 253
>gi|353232562|emb|CCD79917.1| putative heterogeneous nuclear ribonucleoprotein [Schistosoma
mansoni]
Length = 315
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVS 144
+K+F+G L T L+ ++S++G I+DV V KD + RGFGF+T+ E E+V +
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQA 76
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG-----PMRTYGRMYGSL 197
R HEI G+ V A P +D+ ++ M GG +R Y YG++
Sbjct: 77 NRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNI 134
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 46/119 (38%), Gaps = 42/119 (35%)
Query: 16 HELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAPTLYDHPGSFY 75
HE+ G TV RA P+ED P M+
Sbjct: 80 HEIDGKTVEAKRAMPREDSNSPESHMT--------------------------------- 106
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF 134
K+FVG L ++ T E+LR YFS++G I + V + RGFGFVTF
Sbjct: 107 ---------VTKLFVGGLKKDVTHEELREYFSKYGNITECEVVAWKESGESRGFGFVTF 156
>gi|259013338|ref|NP_001158364.1| musashi homolog 2 [Saccoglossus kowalevskii]
gi|32307763|gb|AAP79278.1| musashi nrp-1 [Saccoglossus kowalevskii]
Length = 394
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L TA+D++ +FS++G++ + + D + HRGFGFVTF E V D++
Sbjct: 109 KKIFVGGLSANTTADDIKNHFSQYGKVEEAQLMFDKQTNRHRGFGFVTFDSEDVVDKICE 168
Query: 146 -RSHEICGQQVAIDSATPLD 164
HE+ + V A P +
Sbjct: 169 IHFHEVNSKMVECKKAQPKE 188
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + T + LR YFS+FG + + V +D RGFGF+TF + ++V ++
Sbjct: 22 KMFIGGLSWQTTPDGLREYFSKFGEVTECMVMRDQATKRSRGFGFITFRDPASVEKVLAQ 81
Query: 146 RSHEICGQQVAIDSATP 162
+HE+ +++ A P
Sbjct: 82 AAHELDQKKIDPKVAFP 98
>gi|432899438|ref|XP_004076558.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Oryzias latipes]
Length = 328
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGF+TF E + ++V
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 170 IHFHEINNKMVECKKAQP 187
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G SQ K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTF
Sbjct: 11 GSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFT 70
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATP 162
+ D+V +++ H + + + A P
Sbjct: 71 DAASVDKVLAQQKHSVLIKTIDPKVAFP 98
>gi|171846711|gb|AAI61598.1| LOC734098 protein [Xenopus (Silurana) tropicalis]
Length = 280
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EA + +R YF FG I + +P DPK RGF F+TF EE ++
Sbjct: 103 KKIFVGGLNPEAGEDKIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKILE 162
Query: 145 RRSHEICGQQVAIDSATP 162
++ H + G + I A P
Sbjct: 163 KKFHNVSGSKFEIKIAQP 180
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV- 143
G K+FVG L + + +DL+ YFS+FG + D + DP RGFGF+ F + D+V
Sbjct: 18 GVKMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKVL 77
Query: 144 SRRSHEICGQQV 155
++ H + G+ +
Sbjct: 78 EQKEHRLDGRLI 89
>gi|50604140|gb|AAH77252.1| LOC398218 protein [Xenopus laevis]
Length = 405
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +L+ YF+RFG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 114 NKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 173
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 174 MHFHDIMGKKVEVKRAEPRD 193
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|148688488|gb|EDL20435.1| mCG62132 [Mus musculus]
Length = 518
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 81 SQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVA 140
+Q+ K+F+G L QE + + Y S+FG I+D + DP RGFGFV F +
Sbjct: 28 NQQDASKMFIGGLSQEVNKQVVLEYLSKFGEIIDFIIKIDPNTGLSRGFGFVLFKDSATV 87
Query: 141 DRVSR-RSHEICGQQVAIDSATPLDDAGP 168
++V R + H++ G+++ + A L+ P
Sbjct: 88 EKVLRVKEHKVDGKKIEVKRAKALESQFP 116
Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
+ SQ KK+FVG L + E +R YF FG+I + +P R FGF+ +
Sbjct: 108 AKALESQFPIKKVFVGGLNPRMSEEKIRAYFGTFGQIEAIELPLCSDTQERRAFGFIKYK 167
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATPLDD 165
+E +V R H I + + A P ++
Sbjct: 168 DENPVRKVLETRYHFIGSSRCEVKIAYPKEN 198
>gi|194695198|gb|ACF81683.1| unknown [Zea mays]
gi|414592148|tpg|DAA42719.1| TPA: hypothetical protein ZEAMMB73_519506 [Zea mays]
Length = 313
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KK+FVG L + T E+ R YF FG + DV V D RGFGFVTF E +V R
Sbjct: 137 KKVFVGGLQDDTTEEEFRAYFETFGTVTDVAVIYDSATNRSRGFGFVTFDSEEAVGKVMR 196
Query: 146 RS-HEICGQQVAIDSATPLDD 165
+S H++ G +V A P D+
Sbjct: 197 QSFHDLNGTKVEAKIAIPKDE 217
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADR-- 142
+K+FVG +P A DLR +F+RFG + V V +D + TGH RGFGFV F ++ A
Sbjct: 8 RKLFVGGIPAGAQEADLRAHFARFGEVRSVVVMRD-RETGHGRGFGFVEFEDKAAAAAAA 66
Query: 143 ----VSRRSHEICGQQVAIDSA 160
R H +CG+ V + A
Sbjct: 67 ALGDADRPRHFLCGRAVDVKRA 88
>gi|432899440|ref|XP_004076559.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Oryzias latipes]
Length = 347
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGF+TF E + ++V
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 170 IHFHEINNKMVECKKAQP 187
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G SQ K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTF
Sbjct: 11 GSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFT 70
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATP 162
+ D+V +++ H + + + A P
Sbjct: 71 DAASVDKVLAQQKHSVLIKTIDPKVAFP 98
>gi|427777737|gb|JAA54320.1| Putative glycine rich protein [Rhipicephalus pulchellus]
Length = 355
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 42 SHGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAED 101
+ G YG YN +Y G + + G + +K+FVG + + +D
Sbjct: 17 ADGQYGEYNDGQFTDGQYQQEGEANAQTNEAAQNGSDAKTNEDERKLFVGGISWDTDNKD 76
Query: 102 LRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQV 155
LR YFS+FG ++DV + DP RGFGFVTF A++ + + H + G+Q+
Sbjct: 77 LREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFNAKDAIEAVLKATPHTVKGKQI 131
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L + D++ YF +FG + +V +P D + R F FVTF E + V R
Sbjct: 143 KKIFVGGLESDMPEADIKAYFEKFGPVENVELPFDKAKNQRRQFAFVTFEREDSVELVCR 202
Query: 146 R-SHEICGQQVAIDSATPLDD 165
+I ++ I ATP D
Sbjct: 203 EPKQKIGNKECDIKKATPKPD 223
>gi|345790931|ref|XP_854252.2| PREDICTED: RNA-binding protein Musashi homolog 1 [Canis lupus
familiaris]
Length = 362
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +F ++ D + D HRGFGFVTF E + ++V
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFEKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 146 -RSHEICGQQVAIDSATPLDDAGPS 169
HEI + V A P + P+
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPT 193
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + T E LR YF +FG + + V +DP RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 147 S-HEICGQQVAIDSATP 162
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|29841163|gb|AAP06176.1| SJCHGC06206 protein [Schistosoma japonicum]
gi|226473310|emb|CAX71341.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473312|emb|CAX71342.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473314|emb|CAX71343.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473318|emb|CAX71345.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
Length = 313
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVS 144
+K+F+G L T L+ ++S++G I+DV V KD + RGFGF+T+ E E+V +
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQA 76
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG-----PMRTYGRMYGSL 197
R HEI G+ V A P +D+ ++ M GG +R Y YG++
Sbjct: 77 NRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNI 134
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 46/119 (38%), Gaps = 42/119 (35%)
Query: 16 HELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAPTLYDHPGSFY 75
HE+ G TV RA P+ED P M+
Sbjct: 80 HEIDGKTVEAKRAMPREDSNSPESHMT--------------------------------- 106
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF 134
K+FVG L ++ T E+LR YFS++G I + V + RGFGFVTF
Sbjct: 107 ---------VTKLFVGGLKKDVTHEELREYFSKYGNITECEVVAWKESGESRGFGFVTF 156
>gi|24664592|ref|NP_648764.1| CG7804, isoform A [Drosophila melanogaster]
gi|442632483|ref|NP_001261874.1| CG7804, isoform B [Drosophila melanogaster]
gi|21428322|gb|AAM49821.1| AT09813p [Drosophila melanogaster]
gi|23093435|gb|AAF49643.2| CG7804, isoform A [Drosophila melanogaster]
gi|220949576|gb|ACL87331.1| CG7804-PA [synthetic construct]
gi|220958484|gb|ACL91785.1| CG7804-PA [synthetic construct]
gi|440215819|gb|AGB94567.1| CG7804, isoform B [Drosophila melanogaster]
Length = 318
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 10/128 (7%)
Query: 46 YGAYNAYISA-ATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 104
+G+Y+ + + R++ G P S RG +Q GK +FVGR ++ A+DLR
Sbjct: 155 FGSYDVQMHVLSKRHSIDGRWCEVKVPAS---RGMGNQEPGK-VFVGRCTEDIEADDLRE 210
Query: 105 YFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLD 164
YFS+FG ++DV++PK R F FVTF + V V H I G V + +A +
Sbjct: 211 YFSKFGEVIDVFIPKP-----FRAFSFVTFLDPYVPRVVCGEKHIIKGVSVHVSTADKKN 265
Query: 165 DAGPSQNF 172
+Q F
Sbjct: 266 VQNKNQLF 273
Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 7/124 (5%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFA 135
R E+ R I +G L T +DLR YF +G ++ + KD R+GH +GFGFV F
Sbjct: 99 RTEAHLRCFDLIVLG-LSYNTTEQDLREYFETYGDVVKAEIKKD-TRSGHSKGFGFVRFG 156
Query: 136 EEVVADRVSRRSHEICGQ--QVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRM 193
V V + H I G+ +V + ++ + + P + F+ E +R Y
Sbjct: 157 SYDVQMHVLSKRHSIDGRWCEVKVPASRGMGNQEPGKVFVGRCTEDIE--ADDLREYFSK 214
Query: 194 YGSL 197
+G +
Sbjct: 215 FGEV 218
>gi|170051646|ref|XP_001861859.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167872815|gb|EDS36198.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 308
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + ++++ +F +FG I+DV +P D ++ +GF F+TF +E+VV + +
Sbjct: 121 KIFVGGLTTEISDDEIKTFFGQFGNIVDVEMPFDKQKNQRKGFCFITFDSEQVVNELLKT 180
Query: 146 RSHEICGQQVAIDSATP 162
I G++V + ATP
Sbjct: 181 PKQTISGKEVDVKKATP 197
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
+K+FVG L E + ++L+ +F ++G I + V DP RGF F+ + D+ V+
Sbjct: 40 RKLFVGGLSWETSDKELKEHFGQYGDIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA 99
Query: 145 RRSHEICGQQV 155
H I ++V
Sbjct: 100 AGDHVINNKKV 110
>gi|157110294|ref|XP_001651038.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878762|gb|EAT42987.1| AAEL005515-PF [Aedes aegypti]
Length = 325
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E+++ +F +FG I++V +P D ++ +GF F+TF +E+VV + +
Sbjct: 117 KIFVGGLTTEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELLKT 176
Query: 146 RSHEICGQQVAIDSATPLDD 165
I G++V + ATP D
Sbjct: 177 PKQTISGKEVDVKKATPKPD 196
Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+K+FVG L E + ++L+ +F ++G I + V DP RGF F+ + D+V
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKV 93
>gi|157110296|ref|XP_001651039.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|157110300|ref|XP_001651041.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878763|gb|EAT42988.1| AAEL005515-PG [Aedes aegypti]
gi|108878765|gb|EAT42990.1| AAEL005515-PC [Aedes aegypti]
Length = 300
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E+++ +F +FG I++V +P D ++ +GF F+TF +E+VV + +
Sbjct: 117 KIFVGGLTTEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELLKT 176
Query: 146 RSHEICGQQVAIDSATPLDD 165
I G++V + ATP D
Sbjct: 177 PKQTISGKEVDVKKATPKPD 196
Score = 43.1 bits (100), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+K+FVG L E + ++L+ +F ++G I + V DP RGF F+ + D+V
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKV 93
>gi|332374124|gb|AEE62203.1| unknown [Dendroctonus ponderosae]
Length = 290
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG + E + +D+ YF ++G I++V +P D ++ +GF F+TF +E+VVAD + R
Sbjct: 131 KIFVGGISPELSDDDINEYFGQYGTIMEVEMPFDKQKNQRKGFCFITFESEQVVADLLKR 190
Query: 146 RSHEICGQQVAIDSATPLDD 165
I ++V + ATP D
Sbjct: 191 PKQVIKDKEVDVKKATPKPD 210
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVG L E T ++LR YF ++G I + V D RGF F+ F + DRVS
Sbjct: 50 RKLFVGGLSWETTDKELREYFGKYGEIESINVKTDSMTGRSRGFAFIVFQDAASIDRVSA 109
Query: 146 R-SHEICGQQV 155
H I G++V
Sbjct: 110 AGEHTINGKKV 120
>gi|148905890|gb|ABR16107.1| unknown [Picea sitchensis]
gi|224285605|gb|ACN40521.1| unknown [Picea sitchensis]
gi|224285970|gb|ACN40697.1| unknown [Picea sitchensis]
Length = 371
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L +E ++ +YFS++G + D + KD RGFGFVT+A+ V D+V +
Sbjct: 52 KIFIGGLSRETSSATFTKYFSKYGELTDSVIMKDRATGNPRGFGFVTYADPSVVDKVIKD 111
Query: 147 SHEICGQQVAIDSATPLDDA 166
H I G+ V I P +A
Sbjct: 112 KHFIDGKMVEIKRTIPRGNA 131
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG +P T ++ + YFS+FG++L+ + +D RGFGFVTF +EE V + +S
Sbjct: 139 KKIFVGGIPTSITEDEFKDYFSKFGKVLEHQIMQDHGTGRSRGFGFVTFDSEEAVEEILS 198
Query: 145 R-RSHEICGQQVAIDSATP 162
+ E+ G+QV I A P
Sbjct: 199 HGKMCELGGKQVEIKKAEP 217
>gi|168041315|ref|XP_001773137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675496|gb|EDQ61990.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 199
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADRVSR 145
KIF+G L + + ++L+ +F ++G I+D + KD + TGH RGFGFVTFA+ V D V
Sbjct: 2 KIFIGGLSWDTSTDNLQSHFKKYGEIIDAVIMKD-RSTGHPRGFGFVTFADPAVCDNVVL 60
Query: 146 RSHEICGQQVAIDSATPLDDAGPSQ 170
H I G+ V + P ++ S+
Sbjct: 61 DKHVIDGRTVEAKKSVPRENMAASK 85
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG +P T E+ + YF+ FG +++ + +D RGFGFVTF +E+VV D ++
Sbjct: 90 KKIFVGGIPPSITDEEFKSYFASFGSVVEHQIMQDHSTGRSRGFGFVTFDSEQVVEDILA 149
Query: 145 R-RSHEICGQQV 155
+ HE+ G+QV
Sbjct: 150 HGKMHELGGKQV 161
>gi|110758129|ref|XP_392465.3| PREDICTED: RNA-binding protein squid-like isoform 1 [Apis
mellifera]
Length = 358
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + +D++ +FS+FG I++V +P D + +GF F+TF +E+VV + +
Sbjct: 135 KIFVGGLSTELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 194
Query: 146 RSHEICGQQVAIDSATP 162
I G++V + ATP
Sbjct: 195 PKQTINGKEVDVKKATP 211
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+K+FVG L E T ++LR +F +G I + V DP RGF F+ FA+ D++
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKI 111
>gi|410899380|ref|XP_003963175.1| PREDICTED: TAR DNA-binding protein 43-like isoform 1 [Takifugu
rubripes]
Length = 383
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ TAE+LR+YF ++G + DV++PK R F FVTFA+ VA +
Sbjct: 188 RKVFVGRCTEDMTAEELRQYFMQYGEVTDVFIPKP-----FRAFAFVTFADHQVAQALCG 242
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 243 EDLIIKGVSVHISNAEP 259
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 3/116 (2%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q+ I +G LP + T +DL+ YFS FG ++ V V +D K +GFGFV F +
Sbjct: 102 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVIMVQVKRDLKTGNSKGFGFVRFTDYETQI 160
Query: 142 RVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
+V + H I G+ D P A P + T +R Y YG +
Sbjct: 161 KVIAQRHLIDGRWC--DCKLPNSKACPDDRKVFVGRCTEDMTAEELRQYFMQYGEV 214
>gi|432899442|ref|XP_004076560.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Oryzias latipes]
Length = 328
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF +FG++ D + D HRGFGF+TF E + ++V
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 170 IHFHEINNKMVECKKAQP 187
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G SQ K+F+G L + + + LR YFS+FG I + V +DP RGFGFVTF
Sbjct: 11 GSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFT 70
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATP 162
+ D+V +++ H + + + A P
Sbjct: 71 DAASVDKVLAQQKHSVLIKTIDPKVAFP 98
>gi|168000120|ref|XP_001752764.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695927|gb|EDQ82268.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 176
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADRVSR 145
KIF+G L + + ++L+ +F ++G I+D + KD + TGH RGFGFVTFA+ V D+V
Sbjct: 2 KIFIGGLSWDTSTDNLQSHFKKYGEIIDAVIMKD-RSTGHPRGFGFVTFADPDVCDKVVL 60
Query: 146 RSHEICGQQVAIDSATPLDDAGPSQ 170
H I G+ V + P ++ S+
Sbjct: 61 DKHVIDGRTVEAKKSVPRENLATSK 85
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG +P T E+ + YF+ FG +++ + +D RGFGFVTF +E+VV D ++
Sbjct: 90 KKIFVGGIPPSITDEEFKSYFAGFGSVMEHQIMQDHSTGRSRGFGFVTFDSEQVVEDILA 149
Query: 145 R-RSHEICGQQV 155
+ HE+ G+QV
Sbjct: 150 HGKLHELAGKQV 161
>gi|413925207|gb|AFW65139.1| hypothetical protein ZEAMMB73_790427, partial [Zea mays]
Length = 221
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG LP++ T R+F ++G I+D + KD + RGFGF+T+++ V D+V
Sbjct: 26 KIFVGGLPRDTTDATFVRHFGQYGEIVDSVIMKDRHTSQPRGFGFITYSDPAVVDKVIED 85
Query: 147 SHEICGQQVAIDSATP 162
+H I G+QV I P
Sbjct: 86 NHVINGKQVEIKRTIP 101
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
KKIFVG LP T ++ + +F+R+G ++D + D + RGFGF+ FA E V D
Sbjct: 115 KKIFVGGLPSTLTEDEFKSFFARYGTVVDHQIMFDHETKRSRGFGFIVFASEQVVD 170
>gi|225460542|ref|XP_002277226.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Vitis vinifera]
Length = 348
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G G+S KKIFVG LP T ++ + +FS++G++ + + +D + RGFGF+ F
Sbjct: 97 GSGQSKDFKTKKIFVGGLPSTVTEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFE 156
Query: 136 EEVVADRVSRRSHEI--CGQQVAIDSATPLDDAGP 168
E V D + + I G QV I A P + P
Sbjct: 157 SEEVVDEILSEGNMIDMAGTQVEIKKAEPKKASNP 191
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L ++ T ++F ++G I D + KD RGFGFVT+A+ V D V
Sbjct: 20 KIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADPSVVDSVIED 79
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNF 172
+H I G+QV I P +G S++F
Sbjct: 80 THVINGKQVEIKRTIP-KGSGQSKDF 104
>gi|159164092|pdb|2DGS|A Chain A, Solution Structure Of The Second Rna Binding Domain In
Daz- Associated Protein 1
Length = 99
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VSR 145
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 12 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 71
Query: 146 RSHEICGQQVAIDSATPLD--DAGPS 169
H+I G++V + A P D +GPS
Sbjct: 72 HFHDIMGKKVEVKRAEPRDSKSSGPS 97
>gi|328779378|ref|XP_003249642.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like, partial
[Apis mellifera]
Length = 212
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG L + ++E LR YF FG + DV + KDP RGFGF+TFAE D+V +
Sbjct: 62 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 121
Query: 147 S-HEICGQQVAIDSATPLDDA 166
H + G+++ ATP + A
Sbjct: 122 PIHTLDGKKIDPKHATPKNRA 142
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
R + + R KKIFVG + Q+ ++++++ YF++FG++ + + D + HRGFGFVTF
Sbjct: 140 NRAKQANRT-KKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFE 198
Query: 136 EEVVADRVSR 145
E V DRV
Sbjct: 199 NEDVVDRVCE 208
>gi|348571397|ref|XP_003471482.1| PREDICTED: TAR DNA-binding protein 43-like isoform 1 [Cavia
porcellus]
Length = 413
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR + TA++LR++FS++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTDDMTADELRQFFSQYGEVVDVFIPKP-----FRAFAFVTFADDQVAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|1094717|prf||2106321A stage-specific activator protein
Length = 404
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 80 SSQRIG------KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVT 133
S +R+G KK+FVG + Q+AT EDL F G + DV++ D HRGFGFVT
Sbjct: 87 SEKRMGPGDQRTKKVFVGGISQQATKEDLYELFRSHGNVEDVHIMNDTDTGKHRGFGFVT 146
Query: 134 FAEEVVADRVSRRSH-EICGQQVAIDSATP 162
E +++ R H E+ G+ + I A P
Sbjct: 147 LDSEEAVEKLVRMHHLELKGKSMEIKKAQP 176
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTG-HRGFGFVTFAEEVVADRVS- 144
KIFVG + + A+ R YF +FG++ D+ + D + G ++GFGFVTFA+ D V+
Sbjct: 7 KIFVGGVDRNTHADTFRAYFEKFGKLSDIILMMDKDKPGQNKGFGFVTFADPACVDDVTN 66
Query: 145 RRSHEICGQ 153
++H + G+
Sbjct: 67 EKNHNLEGK 75
>gi|226473316|emb|CAX71344.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
Length = 236
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVS 144
+K+F+G L T L+ ++S++G I+DV V KD + RGFGF+T+ E E+V +
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQA 76
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG-----PMRTYGRMYGSL 197
R HEI G+ V A P +D+ ++ M GG +R Y YG++
Sbjct: 77 NRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNI 134
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 46/119 (38%), Gaps = 42/119 (35%)
Query: 16 HELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAPTLYDHPGSFY 75
HE+ G TV RA P+ED P M+
Sbjct: 80 HEIDGKTVEAKRAMPREDSNSPESHMT--------------------------------- 106
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF 134
K+FVG L ++ T E+LR YFS++G I + V + RGFGFVTF
Sbjct: 107 ---------VTKLFVGGLKKDVTHEELREYFSKYGNITECEVVAWKESGESRGFGFVTF 156
>gi|405977263|gb|EKC41722.1| Heterogeneous nuclear ribonucleoprotein A2-like protein 1
[Crassostrea gigas]
Length = 363
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
+K+F+G L E T L+ YF ++G I D V DP+ RGFGF+T+ + + D +
Sbjct: 42 RKLFIGGLSYETTDSTLKSYFEKWGTITDCVVMTDPQTKRSRGFGFITYEKVAMLDECQA 101
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG 182
R H+I G++V A P +++G S++ N GG
Sbjct: 102 NRPHKIDGREVETKRAMPREESGRSESQKSNEKMFVGG 139
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 71 PGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFG 130
P GR ES Q+ +K+FVG L T +D+R F +G I ++ + KD RGF
Sbjct: 119 PREESGRSES-QKSNEKMFVGGLRDTTTEDDVREAFQEYGNIKNIELIKDKATNKTRGFC 177
Query: 131 FVTFAEEVVADR-VSRRSHEICGQQVAIDSA 160
FVTF + D+ V ++ +IC + V + A
Sbjct: 178 FVTFDDYDPVDKCVLKKRFKICDKDVEVKKA 208
>gi|71999554|ref|NP_001023574.1| Protein SQD-1, isoform b [Caenorhabditis elegans]
gi|351059313|emb|CCD74156.1| Protein SQD-1, isoform b [Caenorhabditis elegans]
Length = 308
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 83 RIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR 142
R KK+FVG LP + + +DLR +F +FG++ D+ P D + R F F+ F EE AD+
Sbjct: 107 RENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADK 166
Query: 143 VSRRSHEICG-QQVAIDSATP 162
S ++ + G ++ + A P
Sbjct: 167 ASSQTKQTFGTRECDVKKAVP 187
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVS 144
KKIFVG + E EDL +F+++G + V D RGF FV F E ++
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALA 88
Query: 145 RRSHEICGQQVAIDSATPLDD 165
R I G+ V + A ++
Sbjct: 89 AREQTIKGKSVEVKPAKSREN 109
>gi|169790823|ref|NP_001116077.1| DAZ-associated protein 1 isoform c [Mus musculus]
gi|74195100|dbj|BAE28294.1| unnamed protein product [Mus musculus]
gi|148699626|gb|EDL31573.1| DAZ associated protein 1, isoform CRA_b [Mus musculus]
Length = 406
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R +SS+ KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +
Sbjct: 105 RSDSSKS--NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFED 162
Query: 137 EVVADR-VSRRSHEICGQQVAIDSATPLD 164
E D+ V+ H+I G++V + A P D
Sbjct: 163 EQSVDQAVNMHFHDIMGKKVEVKRAEPRD 191
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|344307817|ref|XP_003422575.1| PREDICTED: DAZ-associated protein 1 [Loxodonta africana]
Length = 407
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 13/121 (10%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 113 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 172
Query: 145 RRSHEICGQQVAIDSATPLD-------DAGPSQ---NFMMNAAETFGGYGGPMRTYGRMY 194
H+I G++V + A P D G SQ + NAA G G P T+ + Y
Sbjct: 173 MHFHDIMGKKVEVKRAEPRDSKSQAPGQPGASQWGSRIVPNAAN--GWAGQPPPTWQQGY 230
Query: 195 G 195
G
Sbjct: 231 G 231
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|257215987|emb|CAX83143.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215989|emb|CAX83144.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215991|emb|CAX83145.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215993|emb|CAX83146.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215995|emb|CAX83147.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215997|emb|CAX83148.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215999|emb|CAX83149.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257216001|emb|CAX83150.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257216003|emb|CAX83151.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257216005|emb|CAX83152.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
Length = 168
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVS 144
+K+F+G L T L+ ++S++G I+DV V KD + RGFGF+T+ E E+V +
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQA 76
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG-----PMRTYGRMYGSL 197
R HEI G+ V A P +D+ ++ M GG +R Y YG++
Sbjct: 77 NRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNI 134
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 46/119 (38%), Gaps = 42/119 (35%)
Query: 16 HELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAPTLYDHPGSFY 75
HE+ G TV RA P+ED P M+
Sbjct: 80 HEIDGKTVEAKRAMPREDSNSPESHMT--------------------------------- 106
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF 134
K+FVG L ++ T E+LR YFS++G I + V + RGFGFVTF
Sbjct: 107 ---------VTKLFVGGLKKDVTHEELREYFSKYGNITECEVVAWKESGESRGFGFVTF 156
>gi|71999552|ref|NP_001023573.1| Protein SQD-1, isoform a [Caenorhabditis elegans]
gi|351059312|emb|CCD74155.1| Protein SQD-1, isoform a [Caenorhabditis elegans]
Length = 305
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 83 RIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR 142
R KK+FVG LP + + +DLR +F +FG++ D+ P D + R F F+ F EE AD+
Sbjct: 107 RENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADK 166
Query: 143 VSRRSHEICG-QQVAIDSATP 162
S ++ + G ++ + A P
Sbjct: 167 ASSQTKQTFGTRECDVKKAVP 187
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVS 144
KKIFVG + E EDL +F+++G + V D RGF FV F E ++
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALA 88
Query: 145 RRSHEICGQQVAIDSATPLDD 165
R I G+ V + A ++
Sbjct: 89 AREQTIKGKSVEVKPAKSREN 109
>gi|440586615|emb|CCK33029.1| RRM domain protein Musashi [Platynereis dumerilii]
Length = 205
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YFS+FG+I D + D HRGF FVTF E V D+V
Sbjct: 116 KKIFVGGLSASTTLEDVKQYFSQFGKIEDAMLMFDKATQRHRGFAFVTFECEDVVDKVCE 175
Query: 146 -RSHEICGQQVAIDSA 160
HEI + V +
Sbjct: 176 IHFHEINNKMVECKKS 191
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
K+FVG L + T E LR YF+++G I + V +DP RGFGFVT+A+ D+V
Sbjct: 24 KMFVGGLSWQTTPEGLREYFTKYGEIKECMVMRDPITKRSRGFGFVTYADPGSVDKV 80
>gi|8895708|gb|AAF81071.1|AF225910_1 DAZ-associated protein 1 [Mus musculus]
Length = 405
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R +SS+ KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +
Sbjct: 105 RSDSSKS--NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFED 162
Query: 137 EVVADR-VSRRSHEICGQQVAIDSATPLD 164
E D+ V+ H+I G++V + A P D
Sbjct: 163 EQSVDQAVNMHFHDIMGKKVEVKRAEPRD 191
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|71043670|ref|NP_001020913.1| DAZ-associated protein 1 [Rattus norvegicus]
gi|169790818|ref|NP_573451.2| DAZ-associated protein 1 isoform a [Mus musculus]
gi|68534156|gb|AAH98930.1| DAZ associated protein 1 [Rattus norvegicus]
gi|148699628|gb|EDL31575.1| DAZ associated protein 1, isoform CRA_d [Mus musculus]
gi|149034564|gb|EDL89301.1| DAZ associated protein 1, isoform CRA_a [Rattus norvegicus]
Length = 405
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R +SS+ KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +
Sbjct: 105 RSDSSKS--NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFED 162
Query: 137 EVVADR-VSRRSHEICGQQVAIDSATPLD 164
E D+ V+ H+I G++V + A P D
Sbjct: 163 EQSVDQAVNMHFHDIMGKKVEVKRAEPRD 191
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|148223810|ref|NP_001082088.1| DAZ-associated protein 1 [Xenopus laevis]
gi|44887870|sp|Q98SJ2.1|DAZP1_XENLA RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1; AltName:
Full=Proline-rich Vg1 mRNA-binding protein
gi|13488613|gb|AAK26172.1| proline-rich Vg1 mRNA-binding protein [Xenopus laevis]
Length = 360
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +L+ YF+RFG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 114 NKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 173
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 174 MHFHDIMGKKVEVKRAEPRD 193
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|8671754|gb|AAF78364.1|AF181719_1 DAZ associated protein 1 [Homo sapiens]
Length = 407
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 113 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 172
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 173 MHFHDIMGKKVEVKRAEPRD 192
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|302760911|ref|XP_002963878.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
gi|302813190|ref|XP_002988281.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300144013|gb|EFJ10700.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300169146|gb|EFJ35749.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
Length = 188
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T +D R+YF +FG I DV V D RGFGF+TF E D V
Sbjct: 104 KKIFVGGLGSNVTEDDFRKYFEQFGTITDVVVMYDHATQRPRGFGFITFDTEEAVDNVLH 163
Query: 146 RS-HEICGQQVAIDSATPLD-DAGP 168
++ HE+ + V + A P + AGP
Sbjct: 164 KTFHELKEKMVEVKRAVPKELSAGP 188
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + E T E L+ YF +G +++ + +D RGFGFV F++ ADRV
Sbjct: 7 KLFIGGISWETTEEKLKDYFQAYGEVVETVIMRDRTTGRARGFGFVVFSDPNCADRVLLD 66
Query: 147 SHEICG-------QQVAIDSATPLDDAGPSQNFMMNAAETF-GGYGGPM-----RTYGRM 193
H I G +Q ++ A AGP + + F GG G + R Y
Sbjct: 67 KHTIDGRVAVPRDEQHSVVKANGSAVAGPGGHASSKTKKIFVGGLGSNVTEDDFRKYFEQ 126
Query: 194 YGSLDFDDWGYGMGSGRP 211
+G++ Y + RP
Sbjct: 127 FGTITDVVVMYDHATQRP 144
>gi|169790820|ref|NP_001116076.1| DAZ-associated protein 1 isoform b [Mus musculus]
gi|44887872|sp|Q9JII5.2|DAZP1_MOUSE RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1
gi|37572288|gb|AAH49355.1| DAZ associated protein 1 [Mus musculus]
gi|148699627|gb|EDL31574.1| DAZ associated protein 1, isoform CRA_c [Mus musculus]
Length = 406
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R +SS+ KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +
Sbjct: 106 RSDSSKS--NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFED 163
Query: 137 EVVADR-VSRRSHEICGQQVAIDSATPLD 164
E D+ V+ H+I G++V + A P D
Sbjct: 164 EQSVDQAVNMHFHDIMGKKVEVKRAEPRD 192
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|224055563|ref|XP_002298541.1| predicted protein [Populus trichocarpa]
gi|222845799|gb|EEE83346.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L +E T ++F ++G I D + KD K RGFGFVT+A+ V D+V +
Sbjct: 9 KIFIGGLARETTTAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDQVIQD 68
Query: 147 SHEICGQQVAIDSATP 162
+H I G+QV I P
Sbjct: 69 THIINGKQVEIKRTIP 84
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
+KIFVG +P T ++ +F++FG + + + +D RGFGF+TF E+ V D ++
Sbjct: 96 RKIFVGGIPAVVTEDEFNEFFTQFGEVTEHQIMRDHSTNRSRGFGFITFDTEQAVDDLLA 155
Query: 145 R-RSHEICGQQVA 156
R E+ G QV+
Sbjct: 156 RGNKLELAGTQVS 168
>gi|119589908|gb|EAW69502.1| DAZ associated protein 1, isoform CRA_b [Homo sapiens]
Length = 405
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 112 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 171
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 172 MHFHDIMGKKVEVKRAEPRD 191
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|340914891|gb|EGS18232.1| hypothetical protein CTHT_0062490 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 700
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%)
Query: 84 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
I KK+F+G L E T E LR YFS+FG +++ V +D RGFGF+TF + V + V
Sbjct: 223 IAKKMFIGGLNWETTDESLRNYFSQFGEVVECTVMRDSATGRSRGFGFLTFKDPKVVNIV 282
Query: 144 SRRSHEICGQQVAIDSATPLDD 165
+ H + G+ + A P D+
Sbjct: 283 MVKEHYLDGKIIDPKRAIPRDE 304
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q KIFVG + E T + R YFS+FGR++D + D RGFGFVTF E +
Sbjct: 305 QEKTSKIFVGGVSPETTDHEFREYFSQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVE 364
Query: 142 RVSRRSHEICGQQVAIDSATP 162
E+ G+ + + A P
Sbjct: 365 ACLNAKLELHGKPIEVKKAQP 385
>gi|164448723|ref|NP_001039950.2| TAR DNA-binding protein 43 [Bos taurus]
gi|296479176|tpg|DAA21291.1| TPA: TAR DNA binding protein [Bos taurus]
gi|440901447|gb|ELR52388.1| TAR DNA-binding protein 43 [Bos grunniens mutus]
Length = 414
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKP-----FRAFAFVTFADDQVAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDIK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|432098123|gb|ELK28010.1| TAR DNA-binding protein 43 [Myotis davidii]
Length = 414
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKP-----FRAFAFVTFADDQVAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|25470886|ref|NP_061832.2| DAZ-associated protein 1 isoform b [Homo sapiens]
gi|297702955|ref|XP_002828422.1| PREDICTED: DAZ-associated protein 1 isoform 1 [Pongo abelii]
gi|402903559|ref|XP_003914631.1| PREDICTED: DAZ-associated protein 1 isoform 1 [Papio anubis]
gi|44887869|sp|Q96EP5.1|DAZP1_HUMAN RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1
gi|15082313|gb|AAH12062.1| DAZ associated protein 1 [Homo sapiens]
gi|119589907|gb|EAW69501.1| DAZ associated protein 1, isoform CRA_a [Homo sapiens]
gi|167774089|gb|ABZ92479.1| DAZ associated protein 1 [synthetic construct]
gi|261859284|dbj|BAI46164.1| DAZ associated protein 1 [synthetic construct]
gi|380811694|gb|AFE77722.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|383417483|gb|AFH31955.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|384942228|gb|AFI34719.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|410225570|gb|JAA10004.1| DAZ associated protein 1 [Pan troglodytes]
gi|410225572|gb|JAA10005.1| DAZ associated protein 1 [Pan troglodytes]
gi|410256494|gb|JAA16214.1| DAZ associated protein 1 [Pan troglodytes]
gi|410256496|gb|JAA16215.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298126|gb|JAA27663.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298128|gb|JAA27664.1| DAZ associated protein 1 [Pan troglodytes]
Length = 407
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 113 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 172
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 173 MHFHDIMGKKVEVKRAEPRD 192
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|417400375|gb|JAA47137.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 406
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 113 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 172
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 173 MHFHDIMGKKVEVKRAEPRD 192
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|395831307|ref|XP_003788744.1| PREDICTED: DAZ-associated protein 1 [Otolemur garnettii]
Length = 407
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 113 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 172
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 173 MHFHDIMGKKVEVKRAEPRD 192
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|345327668|ref|XP_001515396.2| PREDICTED: TAR DNA-binding protein 43 isoform 2 [Ornithorhynchus
anatinus]
Length = 414
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKP-----FRAFAFVTFADDQVAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|344283523|ref|XP_003413521.1| PREDICTED: TAR DNA-binding protein 43 [Loxodonta africana]
Length = 414
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKP-----FRAFAFVTFADDQVAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|157110306|ref|XP_001651044.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878768|gb|EAT42993.1| AAEL005515-PB [Aedes aegypti]
Length = 292
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E+++ +F +FG I++V +P D ++ +GF F+TF +E+VV + +
Sbjct: 117 KIFVGGLTTEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELLKT 176
Query: 146 RSHEICGQQVAIDSATPLDD 165
I G++V + ATP D
Sbjct: 177 PKQTISGKEVDVKKATPKPD 196
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+K+FVG L E + ++L+ +F ++G I + V DP RGF F+ + D+V
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKV 93
>gi|414868392|tpg|DAA46949.1| TPA: hypothetical protein ZEAMMB73_935024 [Zea mays]
Length = 348
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L ++ + + +F ++G I+D + KD RGFGF+TFA+ V DRV
Sbjct: 15 KIFIGGLSKDTSMSTFKEHFGKYGDIIDAVIMKDRYTQKPRGFGFITFADPTVVDRVIED 74
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNF 172
H I G+ V I P A P ++F
Sbjct: 75 EHVINGKPVEIKRTIP-KGAAPLKDF 99
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG LP ++ + +FS+FG++++ + +D RGFGF+ F AE+ V D +
Sbjct: 102 KKIFVGGLPSALKEDEFKEFFSKFGKVVEHEIIRDHATNRSRGFGFIVFDAEKAVDDLLH 161
Query: 145 RRSH--EICGQQVAIDSATP 162
++ + ++ G QV I A P
Sbjct: 162 KKGNMIDLNGSQVEIKKAEP 181
>gi|391328905|ref|XP_003738923.1| PREDICTED: RNA-binding protein squid-like [Metaseiulus
occidentalis]
Length = 299
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD-RVS 144
KK+F G LP E T E++R YF ++G I + +P D ++ RGF FVT+ AD V
Sbjct: 127 KKVFCGGLPPETTEEEIRTYFGQYGNIEALELPVDKEKNQRRGFIFVTYETTAAADAAVK 186
Query: 145 RRSHEICGQQVAIDSATPLDDA 166
+ I G++ + ATP +D+
Sbjct: 187 KPKQTINGKECDVKKATPKNDS 208
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
+K+F G L + T DLR +F ++G I + V DP RGFGF+TF +++ V D ++
Sbjct: 45 RKLFCGGLSFDTTDADLRSHFEKYGEIQECTVKMDPMTKKSRGFGFITFGSKQAVEDAIA 104
Query: 145 RRSHEICGQQV 155
H I G+Q+
Sbjct: 105 GAPHTIKGKQI 115
>gi|224079936|ref|XP_002186638.1| PREDICTED: TAR DNA-binding protein 43 [Taeniopygia guttata]
Length = 414
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ TA++LR++F+++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELRQFFAQYGEVVDVFIPKP-----FRAFAFVTFADDQVAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F +
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIK-TGHSKGFGFVRFTDYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|338722162|ref|XP_001492915.3| PREDICTED: TAR DNA-binding protein 43 [Equus caballus]
gi|349602995|gb|AEP98963.1| TAR DNA-binding protein 43-like protein [Equus caballus]
Length = 414
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKP-----FRAFAFVTFADDQVAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|347300255|ref|NP_001231435.1| DAZ-associated protein 1 [Sus scrofa]
Length = 406
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 113 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 172
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 173 MHFHDIMGKKVEVKRAEPRD 192
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|289739923|gb|ADD18709.1| RNA-binding protein musashi [Glossina morsitans morsitans]
Length = 295
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + ++++ YF +FG I++V +P D +++ + F F+TF +E+VV++ +
Sbjct: 130 KIFVGGLTNEISDDEIKTYFGQFGNIVEVEMPFDKQKSQRKAFCFITFDSEQVVSELLKT 189
Query: 146 RSHEICGQQVAIDSATPLDD 165
+I G++V + ATP D
Sbjct: 190 PKQKISGKEVDVKRATPKPD 209
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVG L E + ++LR +FS+FG I + V D + RGF F+ F ++V+
Sbjct: 49 RKLFVGGLSWETSEKELREHFSKFGEIESINVKTDSQTGRSRGFAFIVFTGPTAIEKVNE 108
Query: 146 R-SHEICGQQV 155
H I ++V
Sbjct: 109 HGEHVINNKKV 119
>gi|281349254|gb|EFB24838.1| hypothetical protein PANDA_011802 [Ailuropoda melanoleuca]
Length = 414
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKP-----FRAFAFVTFADDQVAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|242053621|ref|XP_002455956.1| hypothetical protein SORBIDRAFT_03g027920 [Sorghum bicolor]
gi|241927931|gb|EES01076.1| hypothetical protein SORBIDRAFT_03g027920 [Sorghum bicolor]
Length = 349
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L ++ + + +F ++G I+D + KD RGFGF+TFA+ V DRV
Sbjct: 15 KIFIGGLSKDTSMSTFKEHFGKYGDIIDAVIMKDRYTQKPRGFGFITFADPAVVDRVIED 74
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNF 172
H I G+ V I P A P ++F
Sbjct: 75 EHVINGKLVEIKRTIP-KGAAPLKDF 99
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG LP ++ + +FS+FG++++ + +D RGFGF+ F AE+ V D ++
Sbjct: 102 KKIFVGGLPSALKEDEFKEFFSKFGKVVEHEIIRDHTTNRSRGFGFIVFDAEKTVDDLLA 161
Query: 145 RRSH--EICGQQVAIDSATP 162
++ + ++ G QV I A P
Sbjct: 162 KKGNMIDLNGSQVEIKKAEP 181
>gi|148699625|gb|EDL31572.1| DAZ associated protein 1, isoform CRA_a [Mus musculus]
gi|149034565|gb|EDL89302.1| DAZ associated protein 1, isoform CRA_b [Rattus norvegicus]
Length = 397
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R +SS+ KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +
Sbjct: 97 RSDSSKS--NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFED 154
Query: 137 EVVADR-VSRRSHEICGQQVAIDSATPLD 164
E D+ V+ H+I G++V + A P D
Sbjct: 155 EQSVDQAVNMHFHDIMGKKVEVKRAEPRD 183
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 3 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 62
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 63 RPHTLDGRNIDPKPCTP 79
>gi|345786818|ref|XP_003432858.1| PREDICTED: DAZ-associated protein 1 [Canis lupus familiaris]
Length = 407
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 113 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 172
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 173 MHFHDIMGKKVEVKRAEPRD 192
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|347963746|ref|XP_003436985.1| AGAP000399-PB [Anopheles gambiae str. PEST]
gi|333467054|gb|EGK96461.1| AGAP000399-PB [Anopheles gambiae str. PEST]
Length = 371
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E+++ +F +FG I++V +P D ++ +GF F+TF +E+VV + +
Sbjct: 184 KIFVGGLTSEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELLKT 243
Query: 146 RSHEICGQQVAIDSATP 162
I G++V + ATP
Sbjct: 244 PKQTISGKEVDVKKATP 260
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVG L E + ++L+ +FS++G I + V DP RGF F+ + D+V
Sbjct: 103 RKLFVGGLSWETSDKELKEHFSQYGDIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA 162
Query: 146 RSHEICGQQ 154
S + +
Sbjct: 163 VSEHVINNK 171
>gi|345794484|ref|XP_535409.3| PREDICTED: TAR DNA-binding protein 43 [Canis lupus familiaris]
gi|395521863|ref|XP_003765034.1| PREDICTED: TAR DNA-binding protein 43 [Sarcophilus harrisii]
Length = 414
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKP-----FRAFAFVTFADDQVAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|300795706|ref|NP_001179960.1| DAZ-associated protein 1 [Bos taurus]
Length = 406
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 113 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 172
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 173 MHFHDIMGKKVEVKRAEPRD 192
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|307940740|gb|ADN95984.1| G-strand specific single-stranded telomere-binding protein 2
[Nicotiana tabacum]
Length = 337
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G ES KKIFVG +P T ++ + +FS+FG++ + + +D RGFGF+ F
Sbjct: 93 GSAESKDFKTKKIFVGGIPTTMTEDEFKNFFSKFGKVTEYEIIRDHVSKRSRGFGFIVFD 152
Query: 136 EEVVADRVSRRSH--EICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRM 193
E V D + + ++ G QV I A P + P+ +A +G R YG
Sbjct: 153 NEQVVDNLLAEGNRTDMMGTQVEIKKAEPKKPSNPA------SAPAYGS-DSRGRGYGDS 205
Query: 194 YGSLDFDDWGYGMGSGRPS 212
YG G+G GS P+
Sbjct: 206 YGGFGNSYSGFGSGSFGPA 224
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L +E T E +YF ++G I+D + KD RGFGF+T+ + V D V
Sbjct: 16 KIFIGGLAKETTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYEDPSVVDTVIAE 75
Query: 147 SHEICGQQVAIDSATPLDDA 166
+H I +QV I P A
Sbjct: 76 NHIINDKQVEIKRTIPKGSA 95
>gi|297275666|ref|XP_001094635.2| PREDICTED: DAZ-associated protein 1 isoform 1 [Macaca mulatta]
Length = 407
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 113 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 172
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 173 MHFHDIMGKKVEVKRAEPRD 192
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|296232416|ref|XP_002761578.1| PREDICTED: DAZ-associated protein 1 [Callithrix jacchus]
Length = 407
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 113 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 172
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 173 MHFHDIMGKKVEVKRAEPRD 192
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|53792441|dbj|BAD53349.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 407
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA-EEVVADRVS 144
+KIFVG LP AT + L+ YF++FG + V D RGFGF+ FA EE A +
Sbjct: 219 RKIFVGGLPVSATEKKLKEYFNKFGEVNRAIVVIDLNTKMPRGFGFIQFASEESTARALK 278
Query: 145 RRSHEICGQQVAIDSATP 162
+ H +CGQ V + A P
Sbjct: 279 KDKHFLCGQWVEVSLAMP 296
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
K+FVG +P + +LR +FSRFG + V PK+ + RGF FV F
Sbjct: 30 KVFVGGVPLGTSESELRAHFSRFGTVAFVGAPKNKQTGAARGFAFVQFVN 79
>gi|298710527|emb|CBJ25591.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 502
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADRVSR 145
K+F+G + + T E LR +F ++G + D+ + KD K TGH RGFGF+ F + V D +
Sbjct: 149 KLFIGGISWQTTEEGLRHHFGKYGTLADIALMKD-KYTGHPRGFGFIKFEDITVLDEILS 207
Query: 146 RSHEICGQQVAIDSATPLDDA-GPS 169
+ H+I G+ V + A P +A GPS
Sbjct: 208 QEHKIDGKVVDVKRAVPKSEAPGPS 232
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KIFVG L + R+YF FG ++D V D + RGFGFVTF E+ V +
Sbjct: 242 NKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHDIMM 301
Query: 146 RSHEICGQQVAIDSATPLDD 165
+HEI G+ V + A P ++
Sbjct: 302 GTHEINGKMVEVKRAEPKEN 321
>gi|261488362|emb|CBH19556.1| RNA recognition motif containing protein [Oryza sativa Indica
Group]
Length = 156
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG LP++ T D ++F ++G I+D + +D + RGFG +T++ V DRV
Sbjct: 24 KIFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGVITYSNPAVVDRVMDD 83
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNF 172
HE G+QV I P D+ S++F
Sbjct: 84 IHEFNGKQVEIKRTIP-KDSVQSKDF 108
>gi|221114449|ref|XP_002154409.1| PREDICTED: uncharacterized protein LOC100213955 [Hydra
magnipapillata]
Length = 397
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
+K+FVG LP T +DLR +F +FG + +V + +D RGF FVTF +E AD+ +
Sbjct: 113 RKVFVGGLPSSITEDDLRSHFEKFGAVHEVDLLRDRDTNRLRGFAFVTFEDEDSADKCIQ 172
Query: 145 RRSHEICGQQVAIDSA 160
+R+ EIC + I A
Sbjct: 173 KRAQEICKKFCEIKRA 188
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 86 KKIFVGRLPQEATAED-LRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-----AEEVV 139
+K+F+G L + T ED LR++F +G+I+DV + +D + RGFGFV F +++
Sbjct: 15 RKLFIGGLNKYHTDEDRLRKFFCEYGKIVDVTIMRDNDKQS-RGFGFVLFENASSVNDII 73
Query: 140 ADRVSRRSHEICGQQVAIDSATP 162
A++ + S E+ Q+ + A P
Sbjct: 74 ANKKAGASFELDDHQIEVKRALP 96
>gi|157110298|ref|XP_001651040.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|157110302|ref|XP_001651042.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878764|gb|EAT42989.1| AAEL005515-PD [Aedes aegypti]
gi|108878766|gb|EAT42991.1| AAEL005515-PA [Aedes aegypti]
Length = 280
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E+++ +F +FG I++V +P D ++ +GF F+TF +E+VV + +
Sbjct: 117 KIFVGGLTTEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELLKT 176
Query: 146 RSHEICGQQVAIDSATPLDD 165
I G++V + ATP D
Sbjct: 177 PKQTISGKEVDVKKATPKPD 196
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+K+FVG L E + ++L+ +F ++G I + V DP RGF F+ + D+V
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKV 93
>gi|348550391|ref|XP_003461015.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1-like
[Cavia porcellus]
Length = 406
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R +SS+ KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +
Sbjct: 106 RSDSSK--SNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFED 163
Query: 137 EVVADR-VSRRSHEICGQQVAIDSATPLD 164
E D+ V+ H+I G++V + A P D
Sbjct: 164 EQSVDQAVNMHFHDIMGKKVEVKRAEPRD 192
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|189234126|ref|XP_969016.2| PREDICTED: similar to mammalian A1, A2 /B1 hnRNP homologue
[Tribolium castaneum]
gi|270002487|gb|EEZ98934.1| hypothetical protein TcasGA2_TC004556 [Tribolium castaneum]
Length = 338
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVS 144
+K+F+G L T E L+++F ++G I+DV V KDP RGFGF+T++ +V D +
Sbjct: 19 RKLFIGGLDYRTTDESLKKHFEKWGEIVDVVVMKDPTTKRSRGFGFITYSRAHMVDDAQN 78
Query: 145 RRSHEICGQQVAIDSATPLDDAG 167
R H++ G+ V A P D G
Sbjct: 79 DRPHKVDGRVVEPKRAVPRQDIG 101
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 71 PGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFG 130
P GR E+ + KK+FVG L + EDLR F +G IL + D RGFG
Sbjct: 96 PRQDIGRPEAGATV-KKLFVGGLKDDVEEEDLRECFKSYGTILSCTIVTDKDTGKKRGFG 154
Query: 131 FVTFAEEVVADRVSR-RSHEICGQQVAIDSA 160
F+ F + D++ R H+I G+ + + A
Sbjct: 155 FIEFEDYDPVDKICLYRHHQIHGKHIDVKKA 185
>gi|307180208|gb|EFN68241.1| RNA-binding protein squid [Camponotus floridanus]
Length = 296
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + +D++ +FS+FG I++V +P D + +GF F+TF +E+VV + +
Sbjct: 130 KIFVGGLSTELSDDDIKNFFSQFGNIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 189
Query: 146 RSHEICGQQVAIDSATP 162
I G+ V + ATP
Sbjct: 190 PKQTISGKAVDVKKATP 206
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
G+ SQ +K+FVG L E T ++LR +FS +G I + V DP RGF F+ FA+
Sbjct: 41 NGQDSQE-DRKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAK 99
Query: 137 EVVADRV-SRRSHEICGQQV 155
D++ S H I ++V
Sbjct: 100 AEALDKIMSAGDHVINNKKV 119
>gi|71894833|ref|NP_001026599.1| DAZ-associated protein 1 [Gallus gallus]
gi|53127644|emb|CAG31151.1| hypothetical protein RCJMB04_2n4 [Gallus gallus]
Length = 409
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 114 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 173
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 174 MHFHDIMGKKVEVKRAEPRD 193
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 12 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 71
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 72 RPHTLDGRNIDPKPCTP 88
>gi|71033517|ref|XP_766400.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353357|gb|EAN34117.1| hypothetical protein TP01_0879 [Theileria parva]
Length = 322
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF G L + T EDL+ YFS+FG + + +D RGFGFVTFAE + V R+
Sbjct: 57 KIFAGGLTRSTTPEDLKAYFSKFGEVTHTEIVRDKNSGRSRGFGFVTFAERESVNTVLRK 116
Query: 147 SHEICGQQVAIDSATPLDDA 166
SH I G + + A + A
Sbjct: 117 SHTIDGVEADVKLAVRKEKA 136
>gi|25470890|ref|NP_733829.1| DAZ-associated protein 1 isoform a [Homo sapiens]
gi|395750099|ref|XP_003779062.1| PREDICTED: DAZ-associated protein 1 isoform 2 [Pongo abelii]
gi|402903561|ref|XP_003914632.1| PREDICTED: DAZ-associated protein 1 isoform 2 [Papio anubis]
gi|119589909|gb|EAW69503.1| DAZ associated protein 1, isoform CRA_c [Homo sapiens]
Length = 378
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 113 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 172
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 173 MHFHDIMGKKVEVKRAEPRD 192
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|426386459|ref|XP_004059702.1| PREDICTED: DAZ-associated protein 1 [Gorilla gorilla gorilla]
Length = 407
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 113 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 172
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 173 MHFHDIMGKKVEVKRAEPRD 192
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|16552365|dbj|BAB71295.1| unnamed protein product [Homo sapiens]
Length = 289
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 24 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 83
Query: 145 RRSHEICGQQVAIDSATPLDD 165
H+I G++V + A P D
Sbjct: 84 MHFHDIMGKKVEVKRAEPRDS 104
>gi|322786135|gb|EFZ12742.1| hypothetical protein SINV_01194 [Solenopsis invicta]
Length = 330
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + +D++ +FS+FG I++V +P D + +GF F+TF +E+VV + +
Sbjct: 125 KIFVGGLSTELSDDDIKNFFSQFGNIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 184
Query: 146 RSHEICGQQVAIDSATP 162
I G+ V + ATP
Sbjct: 185 PKQTINGKAVDVKKATP 201
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
G+ SQ +K+FVG L E T ++LR +FS +G I + V DP RGF F+ FA+
Sbjct: 36 NGQDSQE-DRKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAK 94
Query: 137 EVVADRV-SRRSHEICGQQV 155
D++ S H I ++V
Sbjct: 95 AEALDKIMSAGDHVINNKKV 114
>gi|348514638|ref|XP_003444847.1| PREDICTED: TAR DNA-binding protein 43-like [Oreochromis niloticus]
Length = 396
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+KIFVGR ++ T +DLR+YF ++G + DV++PK R F FVTFA++ VA +
Sbjct: 192 RKIFVGRCTEDMTTDDLRQYFMQYGEVTDVFIPKP-----FRAFAFVTFADDQVAQALCG 246
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 247 EDLIIKGVSVHISNAEP 263
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q+ I +G LP + T +DL+ YFS FG ++ V V +D K +GFGFV F +
Sbjct: 102 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVIMVQVKRDAKTGNSKGFGFVRFTDYETQT 160
Query: 142 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P A P +
Sbjct: 161 KVIAQRHMIDGRWC--DCKLPNSKACPDE 187
>gi|358342147|dbj|GAA49679.1| heterogeneous nuclear ribonucleoprotein A1 A2/B1 homolog
[Clonorchis sinensis]
Length = 919
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+KIF+G L + DL YFS FG+I++ V D + RGFGFVTF + DRV+
Sbjct: 372 RKIFIGGLRRSVKDSDLFSYFSEFGQIVEAVVMMDKETNQSRGFGFVTFVDTDSVDRVAN 431
Query: 146 RS-HEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGP 186
+ H ICG V + A DD + A FG GP
Sbjct: 432 ETLHSICGFPVDVKKAVAKDDLNVRKKPF---AARFGSDAGP 470
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 65 PTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRT 124
P + HP + + +K+FVG L LR ++S+FG + D V KD
Sbjct: 263 PIVEAHP-VITMSNPNCNMLERKLFVGGLNPVTDDYRLREFYSKFGVVTDAVVMKDIAGR 321
Query: 125 GHRGFGFVTFAEEVVAD-RVSRRSHEICGQQVAIDSATPLDDAGP 168
RGFGFVT+ + +A+ + R HEI G+ V A P DA P
Sbjct: 322 S-RGFGFVTYEDPQMAEVACNARPHEIDGKIVDAKKAVPKGDAHP 365
>gi|355702931|gb|EHH29422.1| Deleted in azoospermia-associated protein 1, partial [Macaca
mulatta]
gi|355755280|gb|EHH59027.1| Deleted in azoospermia-associated protein 1, partial [Macaca
fascicularis]
Length = 397
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 103 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 162
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 163 MHFHDIMGKKVEVKRAEPRD 182
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 61 RPHTLDGRNIDPKPCTP 77
>gi|410225574|gb|JAA10006.1| DAZ associated protein 1 [Pan troglodytes]
Length = 379
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 113 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 172
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 173 MHFHDIMGKKVEVKRAEPRD 192
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|426232266|ref|XP_004010154.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Ovis aries]
Length = 421
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 75 YGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF 134
+ ++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F
Sbjct: 152 HSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLF 211
Query: 135 AEEVVADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGY 183
E D+V ++ H++ G+ + A + P + + E FGG+
Sbjct: 212 KESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGF 271
Query: 184 G 184
G
Sbjct: 272 G 272
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 248 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 307
Query: 145 RRSHEI----CGQQVAID 158
++ H + C +VA+
Sbjct: 308 KKYHNVGLSKCEIKVAMS 325
>gi|340729954|ref|XP_003403258.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Bombus
terrestris]
Length = 314
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
K+FVG L E + +D++ +FS+FG I++V +P D + +GF F+TF +E+VV + +
Sbjct: 135 KVFVGGLSTELSDDDIKHFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 194
Query: 146 RSHEICGQQVAIDSATP 162
I G++V + ATP
Sbjct: 195 PKQTINGKEVDVKKATP 211
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+K+FVG L E T ++LR +F +G I + V DP RGF F+ FA+ D++
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKI 111
>gi|332850902|ref|XP_001147948.2| PREDICTED: DAZ-associated protein 1 isoform 1 [Pan troglodytes]
Length = 432
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 138 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 197
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 198 MHFHDIMGKKVEVKRAEPRD 217
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRV 143
G+K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V +
Sbjct: 34 GRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 93
Query: 144 SRRSHEICGQQVAIDSATP 162
+ R H + G+ + TP
Sbjct: 94 ASRPHTLDGRNIDPKPCTP 112
>gi|410256498|gb|JAA16216.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298130|gb|JAA27665.1| DAZ associated protein 1 [Pan troglodytes]
Length = 379
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 113 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 172
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 173 MHFHDIMGKKVEVKRAEPRD 192
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|307211208|gb|EFN87408.1| RNA-binding protein squid [Harpegnathos saltator]
Length = 331
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + +D++ +FS+FG I++V +P D + +GF F+TF +E+VV + +
Sbjct: 129 KIFVGGLSTELSDDDIKHFFSQFGNIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 188
Query: 146 RSHEICGQQVAIDSATP 162
I G+ V + ATP
Sbjct: 189 PKQTINGKAVDVKKATP 205
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
G + +K+FVG L E T ++LR +F+ +G I + V DP RGF F+ FA+
Sbjct: 39 NGSQDSQEDRKLFVGGLSWETTDKELRDHFNTYGDIESINVKTDPNTGRSRGFAFIVFAK 98
Query: 137 EVVADRV-SRRSHEICGQQV 155
D++ S H I ++V
Sbjct: 99 AEALDKIMSAGDHVINNKKV 118
>gi|224087811|ref|XP_002194831.1| PREDICTED: DAZ-associated protein 1 [Taeniopygia guttata]
Length = 410
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 115 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 174
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 175 MHFHDIMGKKVEVKRAEPRD 194
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVS 144
+K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 12 EKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 71
Query: 145 RRSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 72 SRPHTLDGRNIDPKPCTP 89
>gi|432878673|ref|XP_004073373.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oryzias latipes]
Length = 330
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
+ I KKIFVG L + + E++ YF FG I + +P+DPK RGF F+T+ EE
Sbjct: 152 KEIVKKIFVGGLKPDLSKEEIEEYFGAFGEIETIELPQDPKTEKRRGFVFITYKEEPSVK 211
Query: 142 RV-SRRSHEICGQQVAIDSATP 162
+V ++ H + G + I A P
Sbjct: 212 KVLEKKYHTVGGSKCEIKIAQP 233
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YFS+FG + D + D + RGFGF+ F + D+V +
Sbjct: 73 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKDAASVDKVLEQ 132
Query: 146 RSHEICGQQV 155
+ H + G+Q+
Sbjct: 133 KEHRLDGRQI 142
>gi|350396363|ref|XP_003484529.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Bombus
impatiens]
Length = 314
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
K+FVG L E + +D++ +FS+FG I++V +P D + +GF F+TF +E+VV + +
Sbjct: 135 KVFVGGLSTELSDDDIKHFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 194
Query: 146 RSHEICGQQVAIDSATP 162
I G++V + ATP
Sbjct: 195 PKQTINGKEVDVKKATP 211
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+K+FVG L E T ++LR +F +G I + V DP RGF F+ FA+ D++
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKI 111
>gi|74149067|dbj|BAE32189.1| unnamed protein product [Mus musculus]
Length = 414
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKP-----FRAFAFVTFADDKVAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|397466676|ref|XP_003805076.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Pan
paniscus]
Length = 460
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 13/121 (10%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 166 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 225
Query: 145 RRSHEICGQQVAIDSATPLD-------DAGPSQ---NFMMNAAETFGGYGGPMRTYGRMY 194
H+I G++V + A P D G SQ + NAA G G P T+ + Y
Sbjct: 226 MHFHDIMGKKVEVKRAEPRDSKSQAPGQPGASQWGSRVVPNAAN--GWAGQPPPTWQQGY 283
Query: 195 G 195
G
Sbjct: 284 G 284
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRV 143
G+K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V +
Sbjct: 62 GRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 121
Query: 144 SRRSHEICGQQVAIDSATP 162
+ R H + G+ + TP
Sbjct: 122 ASRPHTLDGRNIDPKPCTP 140
>gi|444728185|gb|ELW68649.1| TAR DNA-binding protein 43 [Tupaia chinensis]
Length = 468
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 245 RKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKP-----FRAFAFVTFADDQVAQSLCG 299
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 300 EDLIIKGISVHISNAEP 316
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 155 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIK-TGHSKGFGFVRFTEYETQ 212
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 213 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 240
>gi|326934489|ref|XP_003213321.1| PREDICTED: DAZ-associated protein 1-like [Meleagris gallopavo]
Length = 397
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 133 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 192
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 193 MHFHDIMGKKVEVKRAEPRD 212
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 31 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 90
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 91 RPHTLDGRNIDPKPCTP 107
>gi|395542043|ref|XP_003772944.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Sarcophilus
harrisii]
Length = 306
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 42 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 101
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 102 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 157
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 133 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 192
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 193 KKYHNVGLSKCEIKVAM 209
>gi|351699554|gb|EHB02473.1| DAZ-associated protein 1 [Heterocephalus glaber]
Length = 404
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R +SS+ KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +
Sbjct: 103 RSDSSK--SNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFED 160
Query: 137 EVVADR-VSRRSHEICGQQVAIDSATPLD 164
E D+ V+ H+I G++V + A P D
Sbjct: 161 EQSVDQAVNMHFHDIMGKKVEVKRAEPRD 189
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVS 144
+K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 7 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 66
Query: 145 RRSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 67 SRPHTLDGRNIDPKPCTP 84
>gi|115532850|ref|NP_001040945.1| Protein HRP-1, isoform d [Caenorhabditis elegans]
gi|351063093|emb|CCD71137.1| Protein HRP-1, isoform d [Caenorhabditis elegans]
Length = 347
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD-RVS 144
+KIFVG L T + +R ++S+FG I D+ V +DP RGFGFVTF+ + D +
Sbjct: 23 RKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQN 171
+R H I G+ V A P DD S++
Sbjct: 83 QRPHIIDGKTVDPKRAVPRDDKNRSES 109
Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
K+++V + ++ T + L YF+++G + + D RGFGFVTF + D+ V
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG 182
++SH + G + + D+ +Q M ET GG
Sbjct: 174 QKSHMVNGHRCDVRKGLSKDEMSKAQ--MNRDRETRGG 209
>gi|353232013|emb|CCD79368.1| putative heterogeneous nuclear ribonucleoprotein [Schistosoma
mansoni]
Length = 260
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KK+F+G L + L+ Y+ ++G I+DV V KDP+ RGFGFVT+ + D +
Sbjct: 14 KKLFIGGLSPKTDENSLKNYYGQWGEIIDVVVMKDPRSQKSRGFGFVTYKDSSSVDAAQN 73
Query: 145 RRSHEICGQQVAIDSATPLDDAGP 168
R H + G++V A P ++ P
Sbjct: 74 NRPHTVDGKEVDTKRAMPREETSP 97
>gi|25145229|ref|NP_500326.2| Protein HRP-1, isoform a [Caenorhabditis elegans]
gi|74965787|sp|Q22037.1|ROA1_CAEEL RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1
gi|217300|dbj|BAA01645.1| hnRNP like protein [Caenorhabditis elegans]
gi|351063090|emb|CCD71134.1| Protein HRP-1, isoform a [Caenorhabditis elegans]
Length = 346
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD-RVS 144
+KIFVG L T + +R ++S+FG I D+ V +DP RGFGFVTF+ + D +
Sbjct: 23 RKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQN 171
+R H I G+ V A P DD S++
Sbjct: 83 QRPHIIDGKTVDPKRAVPRDDKNRSES 109
Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
K+++V + ++ T + L YF+++G + + D RGFGFVTF + D+ V
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG 182
++SH + G + + D+ +Q M ET GG
Sbjct: 174 QKSHMVNGHRCDVRKGLSKDEMSKAQ--MNRDRETRGG 209
>gi|115400789|ref|XP_001215983.1| hypothetical protein ATEG_06805 [Aspergillus terreus NIH2624]
gi|114191649|gb|EAU33349.1| hypothetical protein ATEG_06805 [Aspergillus terreus NIH2624]
Length = 454
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q KIFVG + QEA +D + +F +FGR++D + D K TG RGFGFVTF E
Sbjct: 79 QEKTSKIFVGGVSQEANEQDFKSFFMQFGRVVDATLMID-KDTGRPRGFGFVTFDSEAAV 137
Query: 141 DRVSRRSHEICGQQVAIDSATP 162
+ R EI G+ + + A P
Sbjct: 138 EAALSRPLEILGKPIEVKKAQP 159
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+F+G L E T + L+ YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 148 HEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|440898655|gb|ELR50103.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Bos grunniens
mutus]
Length = 277
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 13 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 72
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 73 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 128
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 104 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 163
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 164 KKYHNVGLSKCEIKVAM 180
>gi|426230983|ref|XP_004009536.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Ovis
aries]
Length = 396
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 108 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 167
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 168 MHFHDIMGKKVEVKRAEPRD 187
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 6 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 65
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 66 RPHTLDGRNIDPKPCTP 82
>gi|242093370|ref|XP_002437175.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
gi|241915398|gb|EER88542.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
Length = 414
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG +P T + L+ +FS +G++++ + D RGFGFVTF E +RV
Sbjct: 188 KKIFVGGIPSSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMS 247
Query: 146 --RSHEICGQQVAIDSATP 162
R H++ G+QV I A P
Sbjct: 248 EGRMHDLGGKQVEIKKAEP 266
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG + E T E ++F ++G I D + KD RGFGFVTF++ V DRV
Sbjct: 100 KIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLED 159
Query: 147 SHEICGQQVAIDSATPLDD 165
+H I G+ V + P ++
Sbjct: 160 AHVIDGRTVEVKRTVPKEE 178
>gi|351695030|gb|EHA97948.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Heterocephalus
glaber]
Length = 277
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 13 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 72
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 73 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 128
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 104 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 163
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 164 KKYHNVGLSKCEIKVAM 180
>gi|281341358|gb|EFB16942.1| hypothetical protein PANDA_012747 [Ailuropoda melanoleuca]
Length = 383
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 90 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 149
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 150 MHFHDIMGKKVEVKRAEPRD 169
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 100 EDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSRRSHEICGQQVAID 158
E LR YFS++G ++D + KD RGFGFV F + V ++ R H + G+ +
Sbjct: 1 ETLRGYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPK 60
Query: 159 SATP 162
TP
Sbjct: 61 PCTP 64
>gi|440910410|gb|ELR60208.1| DAZ-associated protein 1, partial [Bos grunniens mutus]
Length = 386
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 13/121 (10%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 103 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 162
Query: 145 RRSHEICGQQVAIDSATPLD-------DAGPSQ---NFMMNAAETFGGYGGPMRTYGRMY 194
H+I G++V + A P D G SQ + NAA G G P T+ + Y
Sbjct: 163 MHFHDIMGKKVEVKRAEPRDSKSQAPGQPGASQWGSRVVPNAAN--GWAGQPPPTWQQGY 220
Query: 195 G 195
G
Sbjct: 221 G 221
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 61 RPHTLDGRNIDPKPCTP 77
>gi|74223342|dbj|BAE21557.1| unnamed protein product [Mus musculus]
Length = 414
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKP-----FRAFAFVTFADDKVAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|340729952|ref|XP_003403257.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Bombus
terrestris]
Length = 362
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
K+FVG L E + +D++ +FS+FG I++V +P D + +GF F+TF +E+VV + +
Sbjct: 135 KVFVGGLSTELSDDDIKHFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 194
Query: 146 RSHEICGQQVAIDSATP 162
I G++V + ATP
Sbjct: 195 PKQTINGKEVDVKKATP 211
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+K+FVG L E T ++LR +F +G I + V DP RGF F+ FA+ D++
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKI 111
>gi|320581591|gb|EFW95811.1| Subunit of cleavage factor I [Ogataea parapolymorpha DL-1]
Length = 431
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T E ++ YFS+FG ++D+ + KD RGFGF+TFA D V ++
Sbjct: 107 KMFIGGLNWETTEESMKNYFSQFGDVIDLTIMKDNATGRSRGFGFLTFASSSSVDEVLKK 166
Query: 147 SHEICGQQVAIDSATPLDD 165
+H + G+ + A P ++
Sbjct: 167 THVLDGKLIDPKRAIPKEE 185
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG + E T + YF +FG I+D + D RG+GFVT+ DRV++
Sbjct: 191 KIFVGGVAPEVTEAEFTEYFQQFGNIIDSQLMLDKDTGRSRGYGFVTYDSPDAVDRVTQN 250
Query: 147 SHEIC-GQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTY 190
+ + G+ + I A P + A ++ G P +TY
Sbjct: 251 KYVLFHGKNMEIKRAEPRN--------QQKAGSSYSNIGQPQQTY 287
>gi|148682887|gb|EDL14834.1| mCG16669, isoform CRA_e [Mus musculus]
Length = 416
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 193 RKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKP-----FRAFAFVTFADDKVAQSLCG 247
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 248 EDLIIKGISVHISNAEP 264
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 103 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 160
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 161 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 188
>gi|21704096|ref|NP_663531.1| TAR DNA-binding protein 43 isoform 1 [Mus musculus]
gi|20140642|sp|Q921F2.1|TADBP_MOUSE RecName: Full=TAR DNA-binding protein 43; Short=TDP-43
gi|15277550|gb|AAH12873.1| TAR DNA binding protein [Mus musculus]
gi|19343817|gb|AAH25544.1| TAR DNA binding protein [Mus musculus]
gi|20379859|gb|AAH27772.1| TAR DNA binding protein [Mus musculus]
gi|21410360|gb|AAH31126.1| TAR DNA binding protein [Mus musculus]
gi|23271460|gb|AAH33475.1| TAR DNA binding protein [Mus musculus]
gi|26328025|dbj|BAC27753.1| unnamed protein product [Mus musculus]
gi|74222000|dbj|BAE26823.1| unnamed protein product [Mus musculus]
gi|148682884|gb|EDL14831.1| mCG16669, isoform CRA_b [Mus musculus]
gi|257222464|gb|ACV52542.1| TDP-43 variant 1 [Mus musculus]
Length = 414
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKP-----FRAFAFVTFADDKVAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|432101161|gb|ELK29445.1| DAZ-associated protein 1 [Myotis davidii]
Length = 435
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 142 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 201
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 202 MHFHDIMGKKVEVKRAEPRD 221
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 40 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 99
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 100 RPHTLDGRNIDPKPCTP 116
>gi|355765936|gb|EHH62474.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Macaca
fascicularis]
Length = 302
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 38 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 97
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAA----------ETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 98 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 153
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 129 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 188
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 189 KKYHNVGLSKCEIKVAM 205
>gi|293336929|ref|NP_001168878.1| uncharacterized protein LOC100382683 [Zea mays]
gi|223973459|gb|ACN30917.1| unknown [Zea mays]
gi|414871120|tpg|DAA49677.1| TPA: hypothetical protein ZEAMMB73_860016 [Zea mays]
Length = 443
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG LP T + R+YF FG + DV V D RGFGF+TF E D V +
Sbjct: 115 KKIFVGGLPSTLTEDGFRQYFQTFGIVTDVVVMYDQNTQRPRGFGFITFDSEDAVDHVLQ 174
Query: 146 RS-HEICGQQVAIDSATP 162
++ H++ G+ V + A P
Sbjct: 175 KTFHDLGGKLVEVKRALP 192
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + E T E L +FS +G + V +D RGFGFV FA+ V DR +
Sbjct: 7 KLFIGGISWETTEEKLSEHFSAYGEVTQAAVMRDKTTGRPRGFGFVVFADPAVVDRALQD 66
Query: 147 SHEICGQQVAIDSA 160
H + G+ V + A
Sbjct: 67 PHTLDGRTVDVKRA 80
>gi|195144344|ref|XP_002013156.1| GL23972 [Drosophila persimilis]
gi|194102099|gb|EDW24142.1| GL23972 [Drosophila persimilis]
Length = 351
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
+KIF+G LP + T E LR +FS+FG + D V +DP RGFGFVTF + + V S
Sbjct: 75 RKIFIGGLPTQTTPETLREFFSKFGAVADAVVMRDPVSNHSRGFGFVTFVDPGSVENVQS 134
Query: 145 RRSHEICGQQVAIDSATP 162
R H I + V A P
Sbjct: 135 TRPHIIDCKTVETKPALP 152
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR 142
KIF+G L +R YFS+FG ++ V V D + RGFGF+ F + A+R
Sbjct: 169 KIFLGGLKDCHDEPMIRDYFSKFGTVMSVKVLIDKETGRKRGFGFLEFGDIDSAER 224
>gi|149024635|gb|EDL81132.1| rCG31562, isoform CRA_b [Rattus norvegicus]
Length = 414
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKP-----FRAFAFVTFADDKVAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|332027282|gb|EGI67366.1| RNA-binding protein squid [Acromyrmex echinatior]
Length = 306
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + +D++ +FS+FG I++V +P D + +GF F+TF +E+VV + +
Sbjct: 128 KIFVGGLSTELSDDDIKNFFSQFGNIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 187
Query: 146 RSHEICGQQVAIDSATP 162
I G+ V + ATP
Sbjct: 188 PKQTINGKAVDVKKATP 204
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 78 GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEE 137
G+ SQ +K+FVG L E T ++LR +FS +G I + V DP RGF F+ FA+
Sbjct: 40 GQDSQE-DRKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKA 98
Query: 138 VVADRV-SRRSHEICGQQV 155
D++ S H I ++V
Sbjct: 99 EALDKIMSAGDHVINNKKV 117
>gi|410957357|ref|XP_003985295.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Felis catus]
Length = 290
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 26 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 85
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 86 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 141
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 117 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 176
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 177 KKYHNVGLSKCEIKVAM 193
>gi|354497793|ref|XP_003511003.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Cricetulus griseus]
Length = 286
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 22 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 81
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 82 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 137
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 113 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 172
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 173 KKYHNVGLSKCEIKVAM 189
>gi|294883716|ref|XP_002771039.1| hypothetical protein Pmar_PMAR026012 [Perkinsus marinus ATCC 50983]
gi|239874245|gb|EER02855.1| hypothetical protein Pmar_PMAR026012 [Perkinsus marinus ATCC 50983]
Length = 390
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
S K+F+G L T ED+R +FS+FG++L V +D K RGFGF TFA + V
Sbjct: 306 SVPNAANKLFIGGLSPATTDEDIRAHFSQFGQVLSSTVVRDKKTGMSRGFGFCTFASDEV 365
Query: 140 ADRVSRRSHEICGQQVAI 157
A V + H I GQ V +
Sbjct: 366 ARYVLEQRHWINGQSVGV 383
>gi|350396366|ref|XP_003484530.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Bombus
impatiens]
Length = 362
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
K+FVG L E + +D++ +FS+FG I++V +P D + +GF F+TF +E+VV + +
Sbjct: 135 KVFVGGLSTELSDDDIKHFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 194
Query: 146 RSHEICGQQVAIDSATP 162
I G++V + ATP
Sbjct: 195 PKQTINGKEVDVKKATP 211
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+K+FVG L E T ++LR +F +G I + V DP RGF F+ FA+ D++
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKI 111
>gi|296206694|ref|XP_002750326.1| PREDICTED: TAR DNA-binding protein 43 isoform 2 [Callithrix
jacchus]
gi|403289910|ref|XP_003936082.1| PREDICTED: TAR DNA-binding protein 43 [Saimiri boliviensis
boliviensis]
Length = 414
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ T ++LR++FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 191 RKVFVGRCTEDMTEDELRQFFSQYGEVMDVFIPKP-----FRAFAFVTFADDQIAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICG 152
+V + H I G
Sbjct: 159 VKVMSQRHMIDG 170
>gi|301776334|ref|XP_002923590.1| PREDICTED: DAZ-associated protein 1-like [Ailuropoda melanoleuca]
Length = 441
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 13/121 (10%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 147 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 206
Query: 145 RRSHEICGQQVAIDSATPLD-------DAGPSQ---NFMMNAAETFGGYGGPMRTYGRMY 194
H+I G++V + A P D G SQ + NAA G G P T+ + Y
Sbjct: 207 MHFHDIMGKKVEVKRAEPRDSKSQAPGQPGASQWGSRVVPNAAN--GWAGQPPPTWQQGY 264
Query: 195 G 195
G
Sbjct: 265 G 265
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 84 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADR 142
I K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V
Sbjct: 42 ISGKLFVGGLDWSTTQETLRGYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 101
Query: 143 VSRRSHEICGQQVAIDSATP 162
++ R H + G+ + TP
Sbjct: 102 LASRPHTLDGRNIDPKPCTP 121
>gi|194212385|ref|XP_001498686.2| PREDICTED: DAZ-associated protein 1-like [Equus caballus]
Length = 608
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 13/121 (10%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 315 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 374
Query: 145 RRSHEICGQQVAIDSATPLD-------DAGPSQ---NFMMNAAETFGGYGGPMRTYGRMY 194
H+I G++V + A P D G SQ + NAA G G P T+ + Y
Sbjct: 375 MHFHDIMGKKVEVKRAEPRDSKSQAPGQPGASQWGSRVVPNAAN--GWAGQPPPTWQQGY 432
Query: 195 G 195
G
Sbjct: 433 G 433
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 213 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 272
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 273 RPHTLDGRNIDPKPCTP 289
>gi|294945366|ref|XP_002784644.1| hypothetical protein Pmar_PMAR021038 [Perkinsus marinus ATCC 50983]
gi|239897829|gb|EER16440.1| hypothetical protein Pmar_PMAR021038 [Perkinsus marinus ATCC 50983]
Length = 390
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
S K+F+G L T ED+R +FS+FG++L V +D K RGFGF TFA + V
Sbjct: 306 SVPNAANKLFIGGLSPATTDEDIRAHFSQFGQVLSSTVVRDKKTGMSRGFGFCTFASDEV 365
Query: 140 ADRVSRRSHEICGQQVAI 157
A V + H I GQ V +
Sbjct: 366 ARYVLEQRHWINGQSVGV 383
>gi|441656584|ref|XP_003277097.2| PREDICTED: DAZ-associated protein 1 [Nomascus leucogenys]
gi|119589910|gb|EAW69504.1| DAZ associated protein 1, isoform CRA_d [Homo sapiens]
Length = 337
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VSR 145
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 73 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 132
Query: 146 RSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 133 HFHDIMGKKVEVKRAEPRD 151
>gi|426327841|ref|XP_004024718.1| PREDICTED: TAR DNA-binding protein 43 [Gorilla gorilla gorilla]
Length = 237
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 14 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP-----FRAFAFVTFADDQIAQSLCG 68
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 69 EDLIIKGISVHISNAEP 85
>gi|67972636|ref|NP_997752.2| heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|42542905|gb|AAH66454.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|67677894|gb|AAH97183.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
Length = 340
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L E T E +R YF FG I + +P DPK RGF F+TF EE ++
Sbjct: 153 KKIFVGGLNPETTEERIREYFGAFGEIETIELPMDPKSNKRRGFVFITFKEEEAVKKILE 212
Query: 145 RRSHEICGQQ 154
++ H + G +
Sbjct: 213 KKYHNVSGTK 222
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YFS+FG + D + DP RGFGF+ F E D+V ++
Sbjct: 70 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDPNTGRSRGFGFILFKEPSGVDKVLAQ 129
Query: 146 RSHEICGQQV 155
+ H + G+Q+
Sbjct: 130 KEHRLDGRQI 139
>gi|148225236|ref|NP_001084027.1| musashi RNA-binding protein 2 [Xenopus laevis]
gi|214936|gb|AAA50004.1| ribonucleoprotein [Xenopus laevis]
Length = 406
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF ++G++ D + D HRGFGFVTF E V ++V
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQYGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 170 IHFHEINNKMVECKKAQP 187
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G SQ K+F+G L + + + LR YF++FG I + V +DP RGFGFVTFA
Sbjct: 11 GSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATP 162
+ D+V ++ HE+ + + A P
Sbjct: 71 DPASVDKVLAQPHHELDSKTIDPKVAFP 98
>gi|357602467|gb|EHJ63411.1| squid protein-like proteinue [Danaus plexippus]
Length = 288
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + ++++ +FS FG I++V +P D + +GF F+TF +E+VV + +
Sbjct: 123 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 182
Query: 146 RSHEICGQQVAIDSATPLDD 165
I G++V + ATP D
Sbjct: 183 PKQTIAGKEVDVKRATPKPD 202
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
+K+FVG L E T ++LR +FS +G I + V DP RGF F+ F D+V +
Sbjct: 42 RKLFVGGLSWETTDKELREHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 101
Query: 145 RRSHEICGQQV 155
H I ++V
Sbjct: 102 AGDHTINNKKV 112
>gi|348535413|ref|XP_003455195.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Oreochromis niloticus]
Length = 316
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + T +DL+ YFS+FG ++D + DP RGFGFV F E D+V S+
Sbjct: 57 KMFVGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPMTGRSRGFGFVLFKEPESVDKVASQ 116
Query: 146 RSHEICGQQVAIDSATPLDDAGPSQNFMM 174
+ H++ G+ + A + P + +
Sbjct: 117 KEHKLNGKVIDPKKAKAMKSKEPVKKIFV 145
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + V +P + K RGF F+TF EE ++
Sbjct: 141 KKIFVGGLSPDTPEEKVREYFGAFGEVESVELPMENKTNKRRGFCFITFKEEEPVKKIME 200
Query: 145 RRSHEI----CGQQVAI 157
++ H I C +VA+
Sbjct: 201 KKYHNIGLSKCEIKVAM 217
>gi|296081021|emb|CBI18525.3| unnamed protein product [Vitis vinifera]
Length = 242
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G G+S KKIFVG LP T ++ + +FS++G++ + + +D + RGFGF+ F
Sbjct: 97 GSGQSKDFKTKKIFVGGLPSTVTEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFE 156
Query: 136 EEVVADRVSRRSHEI--CGQQVAIDSATPLDDAGP 168
E V D + + I G QV I A P + P
Sbjct: 157 SEEVVDEILSEGNMIDMAGTQVEIKKAEPKKASNP 191
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L ++ T ++F ++G I D + KD RGFGFVT+A+ V D V
Sbjct: 20 KIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADPSVVDSVIED 79
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNF 172
+H I G+QV I P +G S++F
Sbjct: 80 THVINGKQVEIKRTIP-KGSGQSKDF 104
>gi|195391065|ref|XP_002054186.1| GJ22934 [Drosophila virilis]
gi|194152272|gb|EDW67706.1| GJ22934 [Drosophila virilis]
Length = 355
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+F+G L T ++L+ +F ++G+I+DV V KDP+ RGFGF+T++ + D +
Sbjct: 27 RKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQK 86
Query: 146 -RSHEICGQQVAIDSATPLDD-----AGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
R H+I G+ V A P D AG + + A +R Y + YGS+
Sbjct: 87 ARPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHYGSI 144
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS- 144
KK+FVG L + + LR YF +G I+D+ + D + RGF FV F + D+V
Sbjct: 118 KKLFVGALKDDHDEQSLRDYFQHYGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVL 177
Query: 145 RRSHEICGQQVAIDSATP 162
++ H++ G+ V + A P
Sbjct: 178 QKQHQLNGKMVDVKKALP 195
>gi|410348704|gb|JAA40956.1| DAZ associated protein 1 [Pan troglodytes]
gi|410348708|gb|JAA40958.1| DAZ associated protein 1 [Pan troglodytes]
gi|410348710|gb|JAA40959.1| DAZ associated protein 1 [Pan troglodytes]
Length = 427
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 113 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 172
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 173 MHFHDIMGKKVEVKRAEPRD 192
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|417409283|gb|JAA51156.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 279
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 16 AAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 75
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 76 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 131
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 107 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD-KTNKRRGFCFITFKEEEPVKKIME 165
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 166 KKYHNVGLSKCEIKVAM 182
>gi|403213324|emb|CCK67826.1| hypothetical protein KNAG_0A01370 [Kazachstania naganishii CBS
8797]
Length = 545
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T + LR YF+++G ++D+ + KDP RGFGF+TF E D V +
Sbjct: 158 KMFIGGLNWETTEDGLREYFNKYGHVIDLKIMKDPNSGRSRGFGFLTFEEPSSVDEVVKT 217
Query: 147 SHEICGQQVAIDSATPLDD 165
H + G+ + + P ++
Sbjct: 218 QHILDGKVIDPKRSIPREE 236
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG + + ++ +FS++G I+D + D RGFGFVT+ DRV +
Sbjct: 242 KIFVGGIGADVRPKEFEEFFSQYGTIIDAQLMLDKDTGRSRGFGFVTYDSPEAVDRVCQN 301
Query: 147 SH-EICGQQVAIDSATP 162
+ + G+Q+ I A P
Sbjct: 302 KYIDFKGKQIEIKRAEP 318
>gi|14110420|ref|NP_112738.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Homo sapiens]
gi|386782249|ref|NP_001247736.1| heterogeneous nuclear ribonucleoprotein D0 [Macaca mulatta]
gi|114594005|ref|XP_001143807.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Pan troglodytes]
gi|297673867|ref|XP_002814969.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Pongo abelii]
gi|402869391|ref|XP_003898746.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Papio anubis]
gi|13124489|sp|Q14103.1|HNRPD_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|870749|dbj|BAA09525.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
gi|2815612|gb|AAC23474.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|12803191|gb|AAH02401.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|63990762|gb|AAY40913.1| unknown [Homo sapiens]
gi|119626280|gb|EAX05875.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_d [Homo sapiens]
gi|119626281|gb|EAX05876.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_d [Homo sapiens]
gi|123982850|gb|ABM83166.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [synthetic construct]
gi|123997529|gb|ABM86366.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [synthetic construct]
gi|355687289|gb|EHH25873.1| Heterogeneous nuclear ribonucleoprotein D0 [Macaca mulatta]
gi|380783619|gb|AFE63685.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
gi|383417965|gb|AFH32196.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
gi|384940052|gb|AFI33631.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
Length = 355
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 91 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 150
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 151 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 206
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 242 KKYHNVGLSKCEIKVAM 258
>gi|410351149|gb|JAA42178.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 356
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 92 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 151
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 152 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 207
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 183 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 242
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 243 KKYHNVGLSKCEIKVAM 259
>gi|397524667|ref|XP_003832310.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D0 [Pan paniscus]
Length = 355
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 91 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 150
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 151 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 206
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 242 KKYHNVGLSKCEIKVAM 258
>gi|410949991|ref|XP_003981699.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Felis
catus]
Length = 472
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 179 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 238
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 239 MHFHDIMGKKVEVKRAEPRD 258
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EV 138
S Q KK+FVG L T E LR YFS++G ++D + KD RGFGFV F +
Sbjct: 70 SEQEERKKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNC 129
Query: 139 VADRVSRRSHEICGQQVAIDSATP 162
V ++ R H + G+ + TP
Sbjct: 130 VGTVLASRPHTLDGRNIDPKPCTP 153
>gi|410348706|gb|JAA40957.1| DAZ associated protein 1 [Pan troglodytes]
Length = 426
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 113 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 172
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 173 MHFHDIMGKKVEVKRAEPRD 192
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 146 RSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|353231613|emb|CCD78031.1| rna-binding protein musashi-related [Schistosoma mansoni]
Length = 438
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 54 SAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRIL 113
S ++ + + +P DH + ++ R KK+F+G + TA++L+ +FS FG++
Sbjct: 90 SNSSTNSPINSPLALDHWSATLLAAQALVR-TKKVFIGGVSTGTTADELKTFFSEFGKVE 148
Query: 114 DVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 162
+ D + HRGFGFVTF E A++V HE+ G+ V A P
Sbjct: 149 TCELMMDKATSRHRGFGFVTFESEQAAEKVCTIHYHELNGKMVEAKRALP 198
>gi|296196172|ref|XP_002745745.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Callithrix jacchus]
Length = 325
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 61 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 120
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 121 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 176
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 152 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 211
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 212 KKYHNVGLSKCEIKVAM 228
>gi|27709546|ref|XP_229073.1| PREDICTED: uncharacterized protein LOC302780 [Rattus norvegicus]
gi|109512293|ref|XP_001066404.1| PREDICTED: uncharacterized protein LOC302780 [Rattus norvegicus]
Length = 565
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 81 SQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVA 140
+Q+ K+F+G L QE + L Y S+FG I+D + DP RGFGFV F +
Sbjct: 28 NQQDASKMFIGGLSQELNKQVLLEYLSKFGEIIDFIIKIDPNTGLSRGFGFVLFKDSSTV 87
Query: 141 DRVSR-RSHEICGQQVAIDSATPLDDAGP 168
++V R + H++ G+++ A L+ P
Sbjct: 88 EKVLRVKDHKVDGKKIEFKRAKALESQFP 116
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
+ SQ KK+FVG L + E +R YF FG+I + +P R FGF+ +
Sbjct: 108 AKALESQFPIKKVFVGGLNPRMSEEKIRAYFGTFGQIEAIELPLCSDTQERRAFGFIKYM 167
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATP 162
+E +V R H I + + A P
Sbjct: 168 DENPVRKVLETRYHFIGSSRCEVKMAFP 195
>gi|403308185|ref|XP_003944552.1| PREDICTED: DAZ-associated protein 1 [Saimiri boliviensis
boliviensis]
Length = 489
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 196 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 255
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 256 MHFHDIMGKKVEVKRAEPRD 275
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVS 144
+K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 93 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 152
Query: 145 RRSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 153 SRPHTLDGRNIDPKPCTP 170
>gi|334330945|ref|XP_001364005.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Monodelphis domestica]
Length = 376
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 112 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 171
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 172 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 227
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 203 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 262
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 263 KKYHNVGLSKCEIKVAM 279
>gi|328711026|ref|XP_001943905.2| PREDICTED: hypothetical protein LOC100169433 [Acyrthosiphon pisum]
Length = 530
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG + Q+ TA++++ YFS+FG++ + + D HRGFGFVTF + + D +
Sbjct: 306 KKIFVGGVSQDTTADEVKAYFSQFGKVEETVMLMDQHTKRHRGFGFVTFENDDIVDTICE 365
Query: 146 -RSHEICGQQVAIDSATPLDDAGP 168
H I ++V A P + P
Sbjct: 366 IHFHTIKNKKVECKKAQPKELVQP 389
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 79 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-E 137
S++ K+FVG L + +A+ L++YF FG + +V + KDP RGFGF+TF++ E
Sbjct: 211 SSTEGTSAKLFVGGLSWQTSADKLKQYFGMFGDVTNVLIMKDPITQRSRGFGFITFSDAE 270
Query: 138 VVADRVSRRSHEICGQQVAIDSATP 162
V ++ H + G+++ ATP
Sbjct: 271 TVEKVLAVPIHTLDGKKIDPKHATP 295
>gi|296485420|tpg|DAA27535.1| TPA: DAZ associated protein 1 [Bos taurus]
Length = 444
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KIFVG +P +LR YF +FG + +V + D ++ RGFGF+TF +E D+ V+
Sbjct: 151 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 210
Query: 145 RRSHEICGQQVAIDSATPLD 164
H+I G++V + A P D
Sbjct: 211 MHFHDIMGKKVEVKRAEPRD 230
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVS 144
+K+FVG L T E LR YFS++G ++D + KD RGFGFV F + V ++
Sbjct: 48 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 107
Query: 145 RRSHEICGQQVAIDSATP 162
R H + G+ + TP
Sbjct: 108 SRPHTLDGRNIDPKPCTP 125
>gi|213623508|gb|AAI69841.1| Ribonucleoprotein [Xenopus laevis]
Length = 406
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L ED+++YF ++G++ D + D HRGFGFVTF E V ++V
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQYGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCE 169
Query: 146 -RSHEICGQQVAIDSATP 162
HEI + V A P
Sbjct: 170 IHFHEINNKMVECKKAQP 187
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G SQ K+F+G L + + + LR YF++FG I + V +DP RGFGFVTFA
Sbjct: 11 GSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 136 EEVVADRV-SRRSHEICGQQVAIDSATP 162
+ D+V ++ HE+ + + A P
Sbjct: 71 DPASVDKVLAQPHHELDSKTIDPKVAFP 98
>gi|410292486|gb|JAA24843.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 355
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 91 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 150
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 151 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 206
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 242 KKYHNVGLSKCEIKVAM 258
>gi|355786585|gb|EHH66768.1| hypothetical protein EGM_03821 [Macaca fascicularis]
Length = 324
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 90 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 149
Query: 146 -RSHEICGQQVAID 158
HEI + V D
Sbjct: 150 IHFHEINNKMVRWD 163
>gi|256073766|ref|XP_002573199.1| rna-binding protein musashi-related [Schistosoma mansoni]
Length = 431
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 54 SAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRIL 113
S ++ + + +P DH + ++ R KK+F+G + TA++L+ +FS FG++
Sbjct: 90 SNSSTNSPINSPLALDHWSATLLAAQALVR-TKKVFIGGVSTGTTADELKTFFSEFGKVE 148
Query: 114 DVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 162
+ D + HRGFGFVTF E A++V HE+ G+ V A P
Sbjct: 149 TCELMMDKATSRHRGFGFVTFESEQAAEKVCTIHYHELNGKMVEAKRALP 198
>gi|395834193|ref|XP_003790096.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Otolemur garnettii]
Length = 355
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 91 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 150
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 151 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 206
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 242 KKYHNVGLSKCEIKVAM 258
>gi|332233349|ref|XP_003265864.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D0 [Nomascus leucogenys]
Length = 355
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 91 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 150
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 151 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 206
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 242 KKYHNVGLSKCEIKVAM 258
>gi|74001715|ref|XP_857957.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 11
[Canis lupus familiaris]
Length = 355
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 91 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 150
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 151 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 206
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 242 KKYHNVGLSKCEIKVAM 258
>gi|5650424|dbj|BAA82622.1| Musashi [Halocynthia roretzi]
Length = 335
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSR-FGRILDVYVPKDPKRTGHRGFGFVTFA-EEVVADRVS 144
KIF+G + Q +T ED+++YF FG + +V + + H+GFGFVTFA E+ V V
Sbjct: 105 KIFIGGIAQSSTTEDVKKYFEEGFGTVNEVVFVINKEDNRHKGFGFVTFANEQAVNKAVD 164
Query: 145 RRSHEICGQQVAIDSATPLDDAGP 168
HEI +Q+ ATP + P
Sbjct: 165 MHFHEIGDKQIEAKRATPREKMPP 188
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L ++ + LR YF FG +++ V KD RGFGFV F+++ +V +
Sbjct: 10 KIFIGGLARQTEDDGLRAYFESFGEVVESIVMKDKVTGFSRGFGFVKFSDQQSVSKVLKN 69
Query: 147 S-HEICGQQVAIDSATP 162
H + +++ TP
Sbjct: 70 GPHSLDNKKIDPKPCTP 86
>gi|29124621|gb|AAH48898.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
Length = 340
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L E T E +R YF FG I + +P DPK RGF F+TF EE ++
Sbjct: 153 KKIFVGGLNPETTEERIREYFGAFGEIETIELPMDPKSNKRRGFVFITFKEEEAVKKILE 212
Query: 145 RRSHEICGQQ 154
++ H + G +
Sbjct: 213 KKYHNVSGTK 222
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ FS+FG + D + DP RGFGF+ F E D+V ++
Sbjct: 70 KMFVGGLSWDTSKKDLKDCFSKFGEVTDCTIKMDPNTGRSRGFGFILFKEPSGVDKVLAQ 129
Query: 146 RSHEICGQQV 155
+ H + G+Q+
Sbjct: 130 KEHRLDGRQI 139
>gi|330799537|ref|XP_003287800.1| hypothetical protein DICPUDRAFT_78661 [Dictyostelium purpureum]
gi|325082176|gb|EGC35667.1| hypothetical protein DICPUDRAFT_78661 [Dictyostelium purpureum]
Length = 557
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADRVSR 145
KIFVG L + + E LR YFS FG + + V K +++ RGFGFVTFA+ V D +
Sbjct: 108 KIFVGGLLKTTSNESLRDYFSEFGVVKESIVIKATEKSNKSRGFGFVTFADPTVIDSIFY 167
Query: 146 RSHEICGQQVAIDSATPLDD 165
H I G++V I A P +D
Sbjct: 168 LEHLIEGKRVEIRKAIPKED 187
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVG LP+ T +D + YFS +G +L+ + + K +GFGFV F +E + + V
Sbjct: 195 QKLFVGGLPKHTTPDDFKSYFSDYGEVLEYNLLTE-KNGSVKGFGFVCFKDENINETVLN 253
Query: 146 RSHEICGQQVAI 157
+H I G++V +
Sbjct: 254 ETHFILGKRVDV 265
>gi|119592079|gb|EAW71673.1| TAR DNA binding protein, isoform CRA_d [Homo sapiens]
Length = 298
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 11/111 (9%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPK-----PFRAFAFVTFADDQIAQSLC 244
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 195
I G V I +A P ++ N + + FG G P+ +YG
Sbjct: 245 GEDLIIKGISVHISNAEPKHNS----NRQLERSGRFG--GNPVHLISNVYG 289
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG 182
+V + H I G+ D P ++ SQ+ + + + F G
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLP--NSKQSQDEPLRSRKVFVG 196
>gi|403263352|ref|XP_003924001.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Saimiri boliviensis boliviensis]
Length = 355
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 91 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 150
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 151 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 206
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 242 KKYHNVGLSKCEIKVAM 258
>gi|345327974|ref|XP_001505245.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Ornithorhynchus anatinus]
Length = 306
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 42 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKEAES 101
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 102 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 157
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 133 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 192
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 193 KKYHNVGLSKCEIKVAM 209
>gi|328724063|ref|XP_001946404.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 87F-like
[Acyrthosiphon pisum]
Length = 290
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
+K+F+G L T + L+ +F ++G+I+D V KDPK R FGF+T+++ + D+ +S
Sbjct: 10 RKLFIGGLDFTTTDDSLKAFFEQWGKIVDYVVIKDPKSKRSRRFGFITYSQSSMVDQAMS 69
Query: 145 RRSHEICGQQVAIDSATPLDDAGPS 169
R H+I G++V A P D+ S
Sbjct: 70 NRPHQIDGREVETKRAVPPDEIKKS 94
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VSR 145
+IFV + ++ DL YF +FG I + + D K RGFGF+ + + D+ +
Sbjct: 102 RIFVTGIKNQS-ENDLLEYFGKFGNITKITIVTD-KGGQRRGFGFIEYDDTDSVDKAILV 159
Query: 146 RSHEICGQQVAIDSATPLDDAG 167
+SH++ G+++ ++ + D G
Sbjct: 160 KSHQVDGEKLDVEKSISRSDGG 181
>gi|148878011|gb|AAI46039.1| HNRNPD protein [Bos taurus]
Length = 355
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 91 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 150
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 151 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 206
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 242 KKYHNVGLSKCEIKVAM 258
>gi|156055736|ref|XP_001593792.1| hypothetical protein SS1G_05220 [Sclerotinia sclerotiorum 1980]
gi|154703004|gb|EDO02743.1| hypothetical protein SS1G_05220 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 521
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 69/166 (41%), Gaps = 26/166 (15%)
Query: 3 KDQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAAL 62
KD +V +MV H L G V D T N+ S +++ L
Sbjct: 66 KDARTVNIVMVKEHYLDGKIVRPDLKT------------------FNNSLRSYPSKFHYL 107
Query: 63 GAPTLYDH------PGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVY 116
+ + H P R E Q KIFVG + Q+A+ +D + YF +FGR++D
Sbjct: 108 ASKNISSHSNFKIDPKRAIPRDE--QERTSKIFVGGVSQDASEQDFKEYFMQFGRVVDAT 165
Query: 117 VPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 162
+ D RGFGFVTF E + EI G+ + + A P
Sbjct: 166 LMMDKDTGRPRGFGFVTFDSEAAVEACLEGPLEIHGKPIEVKKAQP 211
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T + L+ YFS+FG +L+ V +D RGFGF+TF + + V +
Sbjct: 18 KMFIGGLNWETTDQSLKEYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVK 77
Query: 147 SHEICGQQVAIDSAT 161
H + G+ V D T
Sbjct: 78 EHYLDGKIVRPDLKT 92
>gi|302850790|ref|XP_002956921.1| hypothetical protein VOLCADRAFT_107445 [Volvox carteri f.
nagariensis]
gi|300257802|gb|EFJ42046.1| hypothetical protein VOLCADRAFT_107445 [Volvox carteri f.
nagariensis]
Length = 444
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
+G + QR KKIFVG L LR++FS+FG + D V D + RGFGFVTFAE
Sbjct: 93 QGSAPQRT-KKIFVGGLAPSVDEAQLRQHFSQFGTVEDAVVMYDHENKRPRGFGFVTFAE 151
Query: 137 EVVADRVSRRS--HEICGQQVAIDSATPLDDAGPS 169
E DRV I + + + +A P D P+
Sbjct: 152 EDAVDRVFSHGAVQTIADKPIEVKAAVPRDQMPPT 186
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T E LR YF FG + + +V + RGFGFV F VAD+V
Sbjct: 8 KVFIGGLSWETTGEKLRAYFENFGSVREAFVSYNRNNGRPRGFGFVVFESPEVADKVVAT 67
Query: 147 SHEICGQQVAIDSATPLDD 165
H I ++V A P ++
Sbjct: 68 KHTIDRREVEAKKAVPKEE 86
>gi|211826253|gb|AAH11172.2| Hnrnpd protein [Mus musculus]
Length = 351
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 87 AAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 146
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 147 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 202
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 178 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 237
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 238 KKYHNVGLSKCEIKVAM 254
>gi|46137515|ref|XP_390449.1| hypothetical protein FG10273.1 [Gibberella zeae PH-1]
Length = 552
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q KIFVG + QE T ++ + YF++FGR++D + D RGFGFVTF E D
Sbjct: 206 QEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGVD 265
Query: 142 RVSRRSHEICGQQVAIDSATP 162
EI G+ + + A P
Sbjct: 266 ACINVPLEIHGKPIEVKKAQP 286
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%)
Query: 79 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEV 138
++S + K+F+G L E T + LR YF++FG +++ V +D RGFGF+TF +
Sbjct: 114 KASAKEDGKMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAK 173
Query: 139 VADRVSRRSHEICGQQVAIDSATP 162
+ V + H + G+ + + P
Sbjct: 174 TVNIVMVKEHFLDGKILILLQIDP 197
>gi|444723247|gb|ELW63906.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Tupaia
chinensis]
Length = 296
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 44 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 103
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 104 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 159
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 135 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 194
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 195 KKYHNVGLSKCEIKVAM 211
>gi|452981460|gb|EME81220.1| hypothetical protein MYCFIDRAFT_211785, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 353
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG + QEAT D + +F +FGR+LD + D RGFGFVTF E+ +R
Sbjct: 188 KIFVGGVSQEATEADFKDFFMKFGRVLDATLMMDKDTGRPRGFGFVTFDSELAVERTLEG 247
Query: 147 SHEICGQQVAIDSATP 162
I G+ + + A P
Sbjct: 248 PLAILGKPIEVKRAQP 263
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T E L++YFS+FG +++ V +D RGFGF+TF + + V +
Sbjct: 104 KMFIGGLNWETTDESLKQYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKNVNTVMVK 163
Query: 147 SHEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 164 EHSLDGKLIDPKRAIPRDE 182
>gi|408396972|gb|EKJ76123.1| hypothetical protein FPSE_03598 [Fusarium pseudograminearum CS3096]
Length = 546
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q KIFVG + QE T ++ + YF++FGR++D + D RGFGFVTF E D
Sbjct: 200 QEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGVD 259
Query: 142 RVSRRSHEICGQQVAIDSATP 162
EI G+ + + A P
Sbjct: 260 ACINVPLEIHGKPIEVKKAQP 280
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%)
Query: 79 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEV 138
++S + K+F+G L E T + LR YF++FG +++ V +D RGFGF+TF +
Sbjct: 113 KASAKEDGKMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAK 172
Query: 139 VADRVSRRSHEICGQQVAIDSATPLDD 165
+ V + H + G+ + A P D+
Sbjct: 173 TVNIVMVKEHFLDGKIIDPKRAIPRDE 199
>gi|270001992|gb|EEZ98439.1| hypothetical protein TcasGA2_TC000928 [Tribolium castaneum]
Length = 344
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + +D++ +FS++G I++V +P D + +GF F+TF +E+VV + +
Sbjct: 140 KIFVGGLTNELSDDDIKNFFSQYGTIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 199
Query: 146 RSHEICGQQVAIDSATPLDDA 166
I ++V + ATP DA
Sbjct: 200 PKQTIKDKEVDVKKATPKPDA 220
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+K+FVG L E T ++LR +F ++G I + V DP RGF F+ F D+V
Sbjct: 59 RKLFVGGLSWETTDKELRDHFGQYGEIESINVKTDPNTGRSRGFAFIVFNNAEAIDKV 116
>gi|226438196|pdb|3D2W|A Chain A, Crystal Structure Of Mouse Tdp-43 Rrm2 Domain In Complex
Wit
Length = 89
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 11 GSKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKP-----FRAFAFVTFADDKVAQSLC 65
Query: 145 RRSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 66 GEDLIIKGISVHISNAEP 83
>gi|224010812|ref|XP_002294363.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969858|gb|EED88197.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 835
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 75 YGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF 134
GR +++ +K+FVG LP E T E RYF ++G ++D V D + RGFGFVTF
Sbjct: 530 LGRVPATKHDNRKLFVGGLPNEVTDESFLRYFEQYGTVVDSVVLLDRRTKRSRGFGFVTF 589
Query: 135 AEEVVADRVSR 145
A+E VA+ + +
Sbjct: 590 ADEDVANSLLK 600
>gi|196010301|ref|XP_002115015.1| hypothetical protein TRIADDRAFT_28865 [Trichoplax adhaerens]
gi|190582398|gb|EDV22471.1| hypothetical protein TRIADDRAFT_28865 [Trichoplax adhaerens]
Length = 210
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KK+FVG + T ED+ +YF FG+I D + D HRGFGFV F E AD+
Sbjct: 93 KKVFVGGIATNTTTEDITKYFETFGQIEDAMLMFDKSTQRHRGFGFVIFESEDSADKACE 152
Query: 146 -RSHEICGQQVAIDSATP 162
HEI ++V + A P
Sbjct: 153 VHFHEINNKKVEVKKAQP 170
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 84 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+ K+F+G L E LR YF ++G I + + DP RGFGFVTF + AD V
Sbjct: 2 VNSKMFIGGLSWMTNTEKLREYFEKYGEITECVIMHDPITKRSRGFGFVTFTD---ADNV 58
Query: 144 SR 145
+
Sbjct: 59 EK 60
>gi|91076876|ref|XP_976197.1| PREDICTED: similar to Bmsqd-2 isoform 3 [Tribolium castaneum]
Length = 323
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + +D++ +FS++G I++V +P D + +GF F+TF +E+VV + +
Sbjct: 140 KIFVGGLTNELSDDDIKNFFSQYGTIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 199
Query: 146 RSHEICGQQVAIDSATPLDDA 166
I ++V + ATP DA
Sbjct: 200 PKQTIKDKEVDVKKATPKPDA 220
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+K+FVG L E T ++LR +F ++G I + V DP RGF F+ F D+V
Sbjct: 59 RKLFVGGLSWETTDKELRDHFGQYGEIESINVKTDPNTGRSRGFAFIVFNNAEAIDKV 116
>gi|417399538|gb|JAA46770.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 354
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 91 AAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 150
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 151 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 206
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD-KTNKRRGFCFITFKEEEPVKKIME 240
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 241 KKYHNVGLSKCEIKVAM 257
>gi|396473500|ref|XP_003839355.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
gi|312215924|emb|CBX95876.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
Length = 547
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG + QEAT ED +F +FGR++D + D + RGFGFVTF + D +
Sbjct: 172 KIFVGGVSQEATEEDFTAFFKQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLKG 231
Query: 147 SHEICGQQVAIDSATPL-----DDAGPSQNFMMN 175
+I G+ + + A P DD G ++ F N
Sbjct: 232 PLQILGKPIEVKRAQPRGNMRDDDGGDNKKFGRN 265
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+F+G L E T + L+ YF++FG + + V +D RGFGF+TF + + V
Sbjct: 87 RKMFIGGLNWETTEDSLKGYFTQFGEVSECTVMRDSATGRSRGFGFLTFRDPKCVNIVMV 146
Query: 146 RSHEICGQQVAIDSATPLDD 165
+ H + G+ + A P ++
Sbjct: 147 KEHYLDGKIIDPKRAIPREE 166
>gi|312372973|gb|EFR20814.1| hypothetical protein AND_19410 [Anopheles darlingi]
Length = 293
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + E+++ +F +FG I++V +P D ++ +GF F+TF +E+VV + +
Sbjct: 174 KIFVGGLTSEISDEEIKIFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELLKT 233
Query: 146 RSHEICGQQVAIDSATPLDD 165
I G++V + ATP D
Sbjct: 234 PKQTISGKEVDVKKATPKPD 253
>gi|25147057|ref|NP_741784.1| Protein H28G03.1, isoform c [Caenorhabditis elegans]
gi|351064184|emb|CCD72473.1| Protein H28G03.1, isoform c [Caenorhabditis elegans]
Length = 335
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 14/127 (11%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
+K+F+G L + T E L YFS++G ++D V +DP RGFGFVTFA A+ ++
Sbjct: 69 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 128
Query: 145 RRSHEICGQQVAIDSATPLD-------------DAGPSQNFMMNAAETFGGYGGPMRTYG 191
R H++ G+ V A P + D P ++N +R Y
Sbjct: 129 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 188
Query: 192 RMYGSLD 198
+G+LD
Sbjct: 189 ETFGTLD 195
>gi|116256512|ref|NP_001070733.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Mus musculus]
gi|33516945|sp|Q60668.2|HNRPD_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|148688367|gb|EDL20314.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_d [Mus
musculus]
Length = 355
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 91 AAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 150
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 151 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 206
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 242 KKYHNVGLSKCEIKVAM 258
>gi|312373745|gb|EFR21436.1| hypothetical protein AND_17061 [Anopheles darlingi]
Length = 609
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
+ + ++ KIF+GRL ++ A+D+R YFS++G + DV++PK R F FVTF
Sbjct: 191 SKDQMQHQMPSKIFLGRLTEDINADDIRGYFSKYGEVADVFIPK-----PFRAFAFVTFM 245
Query: 136 EEVVADRVSRRSHEICGQQVAIDSATPLDDAG 167
+ VA + H I V + +A+P + G
Sbjct: 246 DPHVAQSLCGEDHLIKSTSVYVSTASPRPEHG 277
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 53/125 (42%), Gaps = 7/125 (5%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R ES R + V LP + T E LR YF FG +L V + KD +G+GF+ FA
Sbjct: 106 RIESRNRTTTDLIVLGLPWKTTEERLREYFESFGELLVVQLKKDANTGQSKGYGFIRFAR 165
Query: 137 EVVADRVSRRSHEI----CGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGR 192
+V + H I C +V S + PS+ F+ E +R Y
Sbjct: 166 FECQMKVLSKRHLIDSRWCDVKVP-SSKDQMQHQMPSKIFLGRLTEDIN--ADDIRGYFS 222
Query: 193 MYGSL 197
YG +
Sbjct: 223 KYGEV 227
>gi|119626277|gb|EAX05872.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_a [Homo sapiens]
Length = 377
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 75 YGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF 134
+ ++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F
Sbjct: 86 HSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLF 145
Query: 135 AEEVVADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGY 183
E D+V ++ H++ G+ + A + P + + E FGG+
Sbjct: 146 KESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGF 205
Query: 184 G 184
G
Sbjct: 206 G 206
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 242 KKYHNVGLSKCEIKVAM 258
>gi|25147051|ref|NP_741783.1| Protein H28G03.1, isoform a [Caenorhabditis elegans]
gi|351064182|emb|CCD72471.1| Protein H28G03.1, isoform a [Caenorhabditis elegans]
Length = 336
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 14/127 (11%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
+K+F+G L + T E L YFS++G ++D V +DP RGFGFVTFA A+ ++
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 129
Query: 145 RRSHEICGQQVAIDSATPLD-------------DAGPSQNFMMNAAETFGGYGGPMRTYG 191
R H++ G+ V A P + D P ++N +R Y
Sbjct: 130 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 189
Query: 192 RMYGSLD 198
+G+LD
Sbjct: 190 ETFGTLD 196
>gi|354496958|ref|XP_003510590.1| PREDICTED: TAR DNA-binding protein 43-like isoform 3 [Cricetulus
griseus]
Length = 302
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 9/113 (7%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK-----PFRAFAFVTFADDKVAQSLC 244
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
I G V I +A P ++ N + + FGG G + + + L
Sbjct: 245 GEDLIIKGISVHISNAEPKHNS----NRQLERSGRFGGNPGILLSTCFLIQEL 293
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|226505238|ref|NP_001141380.1| hypothetical protein [Zea mays]
gi|194704250|gb|ACF86209.1| unknown [Zea mays]
gi|413954079|gb|AFW86728.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 345
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG +P T + L+ +FS +G++++ + D RGFGFVTF E +RV
Sbjct: 125 KKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMS 184
Query: 146 --RSHEICGQQVAIDSATP 162
R H++ G+QV I A P
Sbjct: 185 EGRMHDLGGKQVEIKKAEP 203
>gi|13124487|sp|Q9JJ54.1|HNRPD_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|9588096|dbj|BAB03465.1| RNA binding protein p45AUF1 [Rattus norvegicus]
Length = 353
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 89 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESES 148
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 149 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 204
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 180 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 239
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 240 KKYHNVGLSKCEIKVAM 256
>gi|225680657|gb|EEH18941.1| heterogeneous nuclear ribonucleoprotein A/B [Paracoccidioides
brasiliensis Pb03]
gi|226292332|gb|EEH47752.1| heterogeneous nuclear ribonucleoprotein A1 [Paracoccidioides
brasiliensis Pb18]
Length = 493
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG + QEAT +D +++F +FGR++D + D RGFGFVTF E +
Sbjct: 44 KIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLSG 103
Query: 147 SHEICGQQVAIDSATP 162
EI G+ + + A P
Sbjct: 104 PLEILGKPIEVKKAQP 119
>gi|47087353|ref|NP_998557.1| heterogeneous nuclear ribonucleoprotein D-like [Danio rerio]
gi|33416353|gb|AAH55525.1| Heterogeneous nuclear ribonucleoprotein D-like [Danio rerio]
Length = 296
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA-EEVVADRVS 144
KK+FVG L + T E LR YF +G I + +P D K RGF FVTFA EE V +
Sbjct: 115 KKVFVGGLSPDITEEQLREYFGVYGEIESIELPTDTKTNERRGFCFVTFALEEPVQKLLE 174
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQN 171
R H+I + I A P + QN
Sbjct: 175 NRYHQIGSGKCEIKVAQPKEVYRQQQN 201
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + + +DL Y SRFG +LD + DP RGFGFV F + DRV
Sbjct: 31 KMFIGGLSWDTSKKDLTDYLSRFGEVLDCTIKTDPLTGRSRGFGFVLFKDAESVDRVLEL 90
Query: 147 S-HEICGQQVAIDSATPLDDAGPSQNFMM 174
+ H++ G+ + A + P + +
Sbjct: 91 TEHKLDGKLIDPKRAKAIKGKEPPKKVFV 119
>gi|291237256|ref|XP_002738551.1| PREDICTED: TAR DNA binding protein-like [Saccoglossus kowalevskii]
Length = 311
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G+K+FVGR+ ++ T EDL YF++FG ++DV++PK R F FVTFA+ VA +
Sbjct: 194 GRKVFVGRVTEDITKEDLYSYFTQFGEVVDVFIPK-----PFRFFAFVTFADAEVAQSLC 248
Query: 145 RRSHEICGQQVAIDSATP 162
+ G V + +A P
Sbjct: 249 GEDLIVKGNSVHVSNAEP 266
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R Q+ I +G LP + T E+L+ YFS FG +L V KDPK +GFGFV F +
Sbjct: 100 RRVEKQKCTDLIVLG-LPWKTTEEELKEYFSDFGELLMSQVKKDPKTGNSKGFGFVRFKD 158
Query: 137 EVVADRVSRRSHEICGQ 153
+V + H I G+
Sbjct: 159 YETQLKVMSQRHNIDGR 175
>gi|127138710|ref|NP_077380.2| heterogeneous nuclear ribonucleoprotein D0 isoform a [Rattus
norvegicus]
gi|149046816|gb|EDL99590.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_a [Rattus
norvegicus]
Length = 353
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 89 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESES 148
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 149 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 204
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 180 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 239
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 240 KKYHNVGLSKCEIKVAM 256
>gi|443725988|gb|ELU13330.1| hypothetical protein CAPTEDRAFT_219071 [Capitella teleta]
Length = 453
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 70 HPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGF 129
+P S G+S++ +K+F+G LP T ++++ +F+ FG + DV + D + RGF
Sbjct: 84 NPRSMNKGGKSAENSKRKVFMGGLPSNITEDEIKEHFAEFGEVQDVVIMVDQDKERSRGF 143
Query: 130 GFVTF-AEEVVADRVSRRSHEICGQQVAIDSATP 162
GF+TF EE V +S+ + G+QV A P
Sbjct: 144 GFLTFDCEESVEKVISQHYVPVKGKQVECKRAQP 177
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
KIFVG L + T + +YFSR+G ++D V K+P+ RGFGFVTF + V ++
Sbjct: 9 KIFVGGLSWDTTHATMLKYFSRYGEVIDCVVMKNPQTGKSRGFGFVTFKDPSCVKTVLAN 68
Query: 146 RSHEICGQQVAIDSATP 162
+ H + +Q+ P
Sbjct: 69 QPHVLDSRQIDPKQCNP 85
>gi|25513662|pir||F89530 protein H28G03.1 [imported] - Caenorhabditis elegans
Length = 336
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 14/127 (11%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
+K+F+G L + T E L YFS++G ++D V +DP RGFGFVTFA A+ ++
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 129
Query: 145 RRSHEICGQQVAIDSATPLD-------------DAGPSQNFMMNAAETFGGYGGPMRTYG 191
R H++ G+ V A P + D P ++N +R Y
Sbjct: 130 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 189
Query: 192 RMYGSLD 198
+G+LD
Sbjct: 190 ETFGTLD 196
>gi|508270|gb|AAA64654.1| A+U-rich RNA-binding protein [Mus musculus]
Length = 269
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 60 AAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 119
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 120 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 175
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 151 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDKKTNKRRGFCFITFKEEEPVKKIME 210
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 211 KKYHNVGLSKCEIKVAM 227
>gi|261194978|ref|XP_002623893.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis SLH14081]
gi|239587765|gb|EEQ70408.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis SLH14081]
gi|239610740|gb|EEQ87727.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis ER-3]
gi|327348818|gb|EGE77675.1| hypothetical protein BDDG_00612 [Ajellomyces dermatitidis ATCC
18188]
Length = 530
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG + QEAT +D +++F +FGR++D + D RGFGFVTF E +
Sbjct: 84 KIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLSG 143
Query: 147 SHEICGQQVAIDSATP 162
EI G+ + + A P
Sbjct: 144 PLEILGKPIEVKKAQP 159
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+F+G L E T + L+ YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 148 HEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|350645456|emb|CCD59808.1| tar DNA-binding protein, putative [Schistosoma mansoni]
Length = 344
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 65/144 (45%), Gaps = 23/144 (15%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q + +K+ VG + + TA LR YFS+FG +LDV++PK R F FV+F + VA
Sbjct: 189 QEVSRKVHVGGITESITATVLRDYFSQFGAVLDVFIPKP-----FRSFAFVSFEDPEVAA 243
Query: 142 RVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGP--------MRTYGR- 192
+ + I G V+I SA P ++N M FG P M +G
Sbjct: 244 ELLGKDQVIEGVCVSIGSAVPKLHPQQNRNGPMYPNSHFGNSHNPWAWQYNPAMNVHGTR 303
Query: 193 -----MYGSLDFDDWGYGMGSGRP 211
MY S+ GY M S P
Sbjct: 304 DFNPGMYNSMH----GYNMASHSP 323
>gi|348668207|gb|EGZ08031.1| hypothetical protein PHYSODRAFT_526739 [Phytophthora sojae]
Length = 158
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 70 HPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RG 128
H G+ G S Q K+F+G + E T + LR++F ++G + D + KD K TG RG
Sbjct: 4 HSGAIDKTGTSIQP--GKLFIGGVSWETTEDTLRQHFGKYGALTDAALMKD-KYTGQPRG 60
Query: 129 FGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGP 168
FGFVTFA+ DRV +H + G+ V + A P + P
Sbjct: 61 FGFVTFADATAIDRVLDETHTLDGRSVEVKRAIPREKTAP 100
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 53/134 (39%), Gaps = 43/134 (32%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D +++ ++ +TH L G +V V RA P+E + A G
Sbjct: 68 DATAIDRVLDETHTLDGRSVEVKRAIPRE-------------------------KTAPGG 102
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
L KKIFVG L T +D R YF FG+I D V D
Sbjct: 103 GSRL------------------KKIFVGGLAPTVTEQDFRHYFEEFGKITDAVVMIDRDT 144
Query: 124 TGHRGFGFVTFAEE 137
RGFGF+TF EE
Sbjct: 145 QRSRGFGFITFEEE 158
>gi|291243889|ref|XP_002741832.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Saccoglossus kowalevskii]
Length = 398
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVS 144
+K+F+G L E T + L+ +FS +G I+D V KDP RGFGF+T+ +V D +
Sbjct: 13 RKLFIGGLNYETTDDSLKGHFSEWGEIVDCVVMKDPNTKKSRGFGFITYKRASMVDDAMR 72
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYG-----GPMRTYGRMYGSLD 198
R H+I G++V A +++G M+ GG +R Y YGS++
Sbjct: 73 SRPHKIDGREVEPKRAVAREESGNPLAHMLVKKIFVGGIKEDTSEDHLRDYFSKYGSIE 131
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KKIFVG + ++ + + LR YFS++G I V V D RGF FVTF + D+ V
Sbjct: 104 KKIFVGGIKEDTSEDHLRDYFSKYGSIESVDVISDKDTGKKRGFAFVTFDDHDPVDKIVG 163
Query: 145 RRSHEICGQQVAIDSATP 162
+ H I + + A P
Sbjct: 164 LKYHTINDHKSEVKKAVP 181
>gi|3747052|gb|AAC77437.1| estrogen response element binding protein [Saguinus oedipus]
Length = 358
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 91 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 150
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 151 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 206
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA-EEVVADRVS 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE V +
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKGEEPVKKIME 241
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 242 KKYHNVGLSKCEIKVAM 258
>gi|355564741|gb|EHH21241.1| hypothetical protein EGK_04258 [Macaca mulatta]
Length = 324
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L T ED+++YF +FG++ D + D HRGFGFVTF E + ++V
Sbjct: 90 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 149
Query: 146 -RSHEICGQQVAID 158
HEI + V D
Sbjct: 150 IHFHEINNKMVRWD 163
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 97 ATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQV 155
A E LR YF +FG + + V +DP RGFGFVTF ++ D+V +S HE+ + +
Sbjct: 12 ALVEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTI 71
Query: 156 AIDSATP 162
A P
Sbjct: 72 DPKVAFP 78
>gi|440632909|gb|ELR02828.1| hypothetical protein GMDG_05764 [Geomyces destructans 20631-21]
Length = 544
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 41/76 (53%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG + QEA+ D + YF +FGR++D + D RGFGFVTF E D
Sbjct: 187 KIFVGGVSQEASELDFKEYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVDACINI 246
Query: 147 SHEICGQQVAIDSATP 162
EI G+ + + A P
Sbjct: 247 PLEILGKPIEVKKAQP 262
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T + L+ YFS+FG +++ V +D RGFGF+TF + + V +
Sbjct: 103 KMFIGGLNWETTDQSLKDYFSQFGEVVECTVMRDGASGRSRGFGFLTFKDARTVNVVMVK 162
Query: 147 SHEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 163 EHYLDGKIIDPKRAIPRDE 181
>gi|312373340|gb|EFR21099.1| hypothetical protein AND_17568 [Anopheles darlingi]
Length = 808
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG L E + ++++ +F +FG I++V +P D ++ +GF F+T+ + +VV + +
Sbjct: 134 KIFVGGLTTEISDDEIKTFFGQFGTIVEVEMPFDKQKNQRKGFCFITYDSVQVVNELLKT 193
Query: 146 RSHEICGQQVAIDSATPLDD 165
ICG++V + ATP D
Sbjct: 194 PKQTICGKEVDVKKATPKPD 213
Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV 143
+K+FVG L E T ++L+ +F +G I + V DP RGF F+ + + D+V
Sbjct: 53 RKLFVGGLSWETTDKELKEHFGTYGDIESINVKTDPVTGRSRGFAFIVYKQAESIDKV 110
>gi|255563582|ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223538031|gb|EEF39644.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 348
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L ++ T ++F R+G I D + KD RGFGF+T+A+ V D+V
Sbjct: 20 KIFIGGLAKDTTYATFNKHFGRYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 79
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNF 172
+H I G+QV I P +G S++F
Sbjct: 80 THVIHGKQVEIKRTIP-KGSGQSKDF 104
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF- 134
G G+S KKIFVG +P T ++ + +FS++G++++ + +D + RGFGF+ F
Sbjct: 97 GSGQSKDFKTKKIFVGGIPSSVTEDEFKGFFSKYGQVVEHQIIRDHETNRSRGFGFIIFD 156
Query: 135 AEEVVADRVSRRSH-EICGQQVAIDSATPLDDAGP 168
+EE V + +S + ++ G QV I A P + P
Sbjct: 157 SEETVDEMLSNGNMIDMAGTQVEIKKAEPKKASNP 191
>gi|312095606|ref|XP_003148410.1| hypothetical protein LOAG_12851 [Loa loa]
Length = 233
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD-RVS 144
+K+F+G L E T E LR+Y+S++G ++D V +DP+ RGFGFVTFA +A+ ++
Sbjct: 62 RKLFIGGLSHETTDEQLRQYYSQWGTVVDCIVIRDPQTKYSRGFGFVTFATIQMAEAAMA 121
Query: 145 RRSHEICGQQVAIDSATPLDDAGP 168
R H I + V A P + P
Sbjct: 122 DRPHTINNKVVDPKRAIPREQMSP 145
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQE-ATAEDLRRYFSRFGRILDVYVPKDPK 122
+P L +HP SF E G K+ + + T +DLR+YF FG + V + +P
Sbjct: 144 SPLLPNHPPSFL---EIEPDPGCKLSLSGIHWAWHTVDDLRQYFDNFGTVEQVEILGNP- 199
Query: 123 RTGHRGFGFVTFAEEVVADRVSR--RSHEICGQQVAI 157
RG GFV F + AD+ + H I GQ+ I
Sbjct: 200 ----RGLGFVVFESKPSADKCLEHGKIHIINGQKCEI 232
>gi|119626284|gb|EAX05879.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_f [Homo sapiens]
Length = 277
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 62 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 121
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 122 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 177
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 153 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 212
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 213 KKYHNVGLSKCEIKVAM 229
>gi|25147054|ref|NP_741785.1| Protein H28G03.1, isoform b [Caenorhabditis elegans]
gi|351064183|emb|CCD72472.1| Protein H28G03.1, isoform b [Caenorhabditis elegans]
Length = 315
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 14/127 (11%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
+K+F+G L + T E L YFS++G ++D V +DP RGFGFVTFA A+ ++
Sbjct: 49 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 108
Query: 145 RRSHEICGQQVAIDSATPLD-------------DAGPSQNFMMNAAETFGGYGGPMRTYG 191
R H++ G+ V A P + D P ++N +R Y
Sbjct: 109 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 168
Query: 192 RMYGSLD 198
+G+LD
Sbjct: 169 ETFGTLD 175
>gi|356558851|ref|XP_003547716.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Glycine
max]
Length = 372
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L +E T ++F ++G I D + KD K RGFGF+T+A+ V D V
Sbjct: 43 KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDTVIED 102
Query: 147 SHEICGQQVAIDSATP 162
+H I G+QV I P
Sbjct: 103 THIINGKQVEIKRTIP 118
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG +P T ++ R +F+R+G + D + +D RGFGF+T+ +EE V D +S
Sbjct: 132 KKIFVGGIPSTVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITYDSEEAVDDLLS 191
Query: 145 RRSH-EICGQQVAIDSATP 162
+ E G QV I A P
Sbjct: 192 VGNKIEFAGAQVEIKKAEP 210
>gi|198450175|ref|XP_002137048.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
gi|198130926|gb|EDY67606.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
Length = 368
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+F+G L T ++L+ +F ++G+I+DV V KDP+ RGFGF+T++ + D +
Sbjct: 26 RKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSTMIDEAQK 85
Query: 146 -RSHEICGQQVAIDSATPLDD 165
R H+I G+ V A P D
Sbjct: 86 ARPHKIDGRVVEPKRAVPRQD 106
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS- 144
KK+FVG L + + LR YF FG I+D+ + D + RGF FV F + D+V
Sbjct: 117 KKLFVGALKDDHDEQSLRDYFQHFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVL 176
Query: 145 RRSHEICGQQVAIDSATP 162
++ H++ G+ V + A P
Sbjct: 177 QKQHQLNGKMVDVKKALP 194
>gi|170585802|ref|XP_001897671.1| heterogeneous nuclear ribonucleoprotein A1,putative [Brugia malayi]
gi|158594978|gb|EDP33555.1| heterogeneous nuclear ribonucleoprotein A1,putative [Brugia malayi]
Length = 355
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD-RVS 144
+K+F+G L E T E LR+Y+S++G ++D V +DP+ RGFGFVTFA +A+ ++
Sbjct: 52 RKLFIGGLSHETTDEQLRQYYSQWGTVVDCIVIRDPQTKYSRGFGFVTFATIQMAEAAMA 111
Query: 145 RRSHEICGQQVAIDSATPLDDAGP 168
R H I + V A P + P
Sbjct: 112 DRPHTINNKVVDPKRAIPREQMSP 135
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQE-ATAEDLRRYFSRFGRILDVYVPKDPK 122
+P L +HP SF E G K+ + + T +DLR+YF FG + V + +P
Sbjct: 134 SPLLPNHPPSFL---EIEPDPGCKLSLSGIHWAWHTVDDLRQYFDNFGTVEQVEILGNP- 189
Query: 123 RTGHRGFGFVTFAEEVVADRVSR--RSHEICGQQVAI 157
RG GFV F + AD+ + H I GQ+ I
Sbjct: 190 ----RGLGFVVFENKSSADKCLEHGKIHIINGQKCEI 222
>gi|148682889|gb|EDL14836.1| mCG16669, isoform CRA_g [Mus musculus]
Length = 288
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK-----PFRAFAFVTFADDKVAQSLC 244
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG 185
I G V I +A P ++ N + + FGG G
Sbjct: 245 GEDLIIKGISVHISNAEPKHNS----NRQLERSGRFGGNPG 281
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|224161731|ref|XP_002338367.1| predicted protein [Populus trichocarpa]
gi|222872031|gb|EEF09162.1| predicted protein [Populus trichocarpa]
Length = 151
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG +P T ++L+ YFS +G I+D + D K RGFGFVTF E +R+
Sbjct: 73 KKIFVGGIPPSLTEDELKEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDSEDAVERIFS 132
Query: 146 --RSHEICGQQVAIDSA 160
R+HE+ G+QV SA
Sbjct: 133 EGRTHELGGKQVGYSSA 149
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%)
Query: 105 YFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLD 164
YFS++G ++D + D RGFGFVTFA+ VVADRV H I G+ V + P +
Sbjct: 4 YFSKYGEVMDSVIMTDRHSGRPRGFGFVTFADPVVADRVLEEDHVIDGRAVEVKRTVPRE 63
Query: 165 D 165
D
Sbjct: 64 D 64
>gi|407928279|gb|EKG21140.1| hypothetical protein MPH_01533 [Macrophomina phaseolina MS6]
Length = 571
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q KIFVG + QEAT +D + +F +FGR++D + D RGFGFVTF E D
Sbjct: 182 QEKTAKIFVGGVSQEATEQDFKSFFEQFGRVIDATLMMDKDTGRPRGFGFVTFDGEAAVD 241
Query: 142 RVSRRSHEICGQQVAIDSATP 162
+ I G+ + + A P
Sbjct: 242 ACLQGPLAILGKPIEVKRAQP 262
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T + LR YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 103 KMFIGGLNWETTDQSLRDYFSQFGEVAECTVMRDGATGRSRGFGFLTFRDPKTVNIVMVK 162
Query: 147 SHEICGQQVAIDSATPLDD 165
H + G+ + A P ++
Sbjct: 163 EHYLDGKIIDPKRAIPREE 181
>gi|336263120|ref|XP_003346341.1| hypothetical protein SMAC_07818 [Sordaria macrospora k-hell]
gi|380091669|emb|CCC10801.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 532
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 43/82 (52%)
Query: 81 SQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVA 140
Q KIFVG + QE T + R YF++FGR++D + D RGFGFVTF E
Sbjct: 78 EQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGV 137
Query: 141 DRVSRRSHEICGQQVAIDSATP 162
D + EI G+ + + A P
Sbjct: 138 DACLSANLEIHGKPIEVKKAQP 159
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+F+G L E T + LR YFS++G +++ V +D RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQYGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNVVMVKE 60
Query: 148 HEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|194381506|dbj|BAG58707.1| unnamed protein product [Homo sapiens]
Length = 298
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 75 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP-----FRAFAFVTFADDQIAQSLCG 129
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 130 EDLIIKGISVHISNAEP 146
>gi|195036932|ref|XP_001989922.1| GH19059 [Drosophila grimshawi]
gi|193894118|gb|EDV92984.1| GH19059 [Drosophila grimshawi]
Length = 391
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 79 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEV 138
E+S+ + ++IFVG L TAE +R +FS+FG + D V +DP R FGFVTF E
Sbjct: 41 ENSEHL-RRIFVGGLSLNTTAETMRHFFSQFGDVADAIVMRDPISNRSRCFGFVTFVEAA 99
Query: 139 VADRVSR-RSHEICGQQVAIDSATPLDDAGPSQNFMMN 175
+ V R R H + G+ V A P S + N
Sbjct: 100 SVENVQRTRPHIVDGKTVETKRAFPRHQFSKSMGHLSN 137
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L LR YF++FG I V V D + RGFGF+ F + A R +
Sbjct: 142 KIFIGGLRDCHDETTLREYFAQFGNINSVKVLLDKETGRIRGFGFLEFEDIASAARALGQ 201
Query: 147 SHEICGQQVA 156
+ G ++
Sbjct: 202 GKHLIGCKMV 211
>gi|307940742|gb|ADN95985.1| G-strand specific single-stranded telomere-binding protein 3
[Nicotiana tabacum]
Length = 339
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
G ES KKIFVG +P T ++ + +FS+FG++ + + +D RGFGF+ F
Sbjct: 93 GSAESKDFKTKKIFVGGIPTTMTEDEFKNFFSKFGKVTEYEIIRDHVSKRSRGFGFIVFD 152
Query: 136 EEVVADRVSRRSHEI--CGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRM 193
E V D + + I G QV I A P + P+ + GYG +G
Sbjct: 153 NEQVVDNLLAEGNRIDMMGTQVEIKKAEPKKPSNPASAPAYGSDSRGRGYGDSYGGFGNS 212
Query: 194 Y 194
Y
Sbjct: 213 Y 213
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L +E T E +YF ++G I+D + KD RGFGF+T+ + V D V
Sbjct: 16 KIFIGGLAKETTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYEDPSVVDTVIAE 75
Query: 147 SHEICGQQVAIDSATPLDDA 166
H I +QV I P A
Sbjct: 76 YHIINDKQVEIKRTIPKGSA 95
>gi|241627626|ref|XP_002408070.1| RNA-binding protein musashi, putative [Ixodes scapularis]
gi|215501115|gb|EEC10609.1| RNA-binding protein musashi, putative [Ixodes scapularis]
Length = 353
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 42 SHGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAED 101
+ G YG YN +Y G + + G + +K+FVG + + +D
Sbjct: 17 ADGQYGDYNDGQFTDGQYQQEGDGNGQTNEVAQNGSDSKTNEDERKLFVGGISWDTDNKD 76
Query: 102 LRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQV 155
LR YFS+FG ++DV + DP RGFGFVTF A+E + + H + G+Q+
Sbjct: 77 LREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFTAKEAIEAVLKATPHTVKGKQI 131
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG L + D++ YF +FG + +V +P D + R F FVTF E + V R
Sbjct: 143 KKIFVGGLESDMPEADIKAYFEKFGPVENVELPFDKAKNQRRQFAFVTFEREDSVELVCR 202
Query: 146 R-SHEICGQQVAIDSATPLDDA 166
+I ++ I ATP DA
Sbjct: 203 EPKQKIGNKECDIKKATPKPDA 224
>gi|325093053|gb|EGC46363.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus H88]
Length = 687
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q KIFVG + QEAT +D +++F +FGR++D + D RGFGFVTF E +
Sbjct: 234 QERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVE 293
Query: 142 RVSRRSHEICGQQVAIDSATP 162
EI G+ + + A P
Sbjct: 294 ATLSGPLEILGKPIEVKKAQP 314
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T + L+ YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 155 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 214
Query: 147 SHEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 215 EHYLDGKIIDPKRAIPRDE 233
>gi|321459101|gb|EFX70158.1| hypothetical protein DAPPUDRAFT_189289 [Daphnia pulex]
Length = 334
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
KIFVG LPQ+ T E +R +F FG I+++ +P D + + F F+T+ E VV D +
Sbjct: 149 KIFVGGLPQDTTEETIRSFFGTFGNIVEIEMPFDRVKNQRKNFCFITYDNENVVFDLLKT 208
Query: 146 RSHEICGQQVAIDSATPLDDA-GP 168
I G++V + ATP D+ GP
Sbjct: 209 PKQVINGKEVDVKKATPKPDSFGP 232
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVG L T ++LR +F ++G I + V DP+ RGF F+ F D+V
Sbjct: 68 RKLFVGGLSWATTDKELREHFGKYGEIESITVKMDPQTGRSRGFAFLVFKSAENLDKVMN 127
Query: 146 R-SHEICGQQV 155
H I G++V
Sbjct: 128 AGEHIINGKRV 138
>gi|325179628|emb|CCA14026.1| heterogeneous nuclear ribonucleoprotein A1 putative [Albugo
laibachii Nc14]
Length = 618
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VSR 145
KIF+G L E T E LR YF FG + D V KDP RGFGF+T+A+ DR +++
Sbjct: 9 KIFIGGLSYETTDEKLRSYFGAFGSVTDAVVMKDPISRRSRGFGFITYADPACVDRALAQ 68
Query: 146 RSHEICGQQVAIDSATPLDD 165
SH + ++V A P D
Sbjct: 69 PSHVLDSRRVEAKRAVPRAD 88
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L E + ++YF ++G+++ V + + RGFGFV F E D + +
Sbjct: 120 KKIFVGGLHYETKDAEFKKYFQKYGKVVSAEVMFNRETNKSRGFGFVIFENEQSVDLILN 179
Query: 145 RRSHEICGQQVAIDSATPLDDAGP 168
R H I G+ V + A P D P
Sbjct: 180 ERDHMIDGKLVEVKRAVPRTDVPP 203
>gi|297823133|ref|XP_002879449.1| hypothetical protein ARALYDRAFT_482284 [Arabidopsis lyrata subsp.
lyrata]
gi|297325288|gb|EFH55708.1| hypothetical protein ARALYDRAFT_482284 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 69/162 (42%), Gaps = 29/162 (17%)
Query: 4 DQDSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALG 63
D ++ ++ D H + V V RA +E+ P GR G + A + S A
Sbjct: 56 DPAVIDRVLQDKHHIDNRDVDVKRAMSREEQ-SPAGR--SGNFNASRNFDSGANVRT--- 109
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKR 123
KKIFVG LP T+++ R YF +G + D + D
Sbjct: 110 ----------------------KKIFVGGLPPALTSDEFRAYFETYGPVSDAVIMIDQTT 147
Query: 124 TGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD 164
RGFGFV+F E D V ++ H++ G+QV + A P D
Sbjct: 148 QRPRGFGFVSFDSEDSVDLVLHKTFHDLNGKQVEVKRALPKD 189
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + LR YFS FG +L V V ++ RGFGFV F++ V DRV +
Sbjct: 7 KLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRVLQD 66
Query: 147 SHEICGQQVAIDSATPLDD---AGPSQNFMMNAAETF 180
H I + V + A ++ AG S NF NA+ F
Sbjct: 67 KHHIDNRDVDVKRAMSREEQSPAGRSGNF--NASRNF 101
>gi|126328722|ref|XP_001364507.1| PREDICTED: TAR DNA-binding protein 43-like isoform 3 [Monodelphis
domestica]
Length = 302
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPK-----PFRAFAFVTFADDQVAQSLC 244
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPM 187
I G V I +A P ++ N + + FGG G +
Sbjct: 245 GEDLIIKGISVHISNAEPKHNS----NRQLERSGRFGGNPGIL 283
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|119592075|gb|EAW71669.1| TAR DNA binding protein, isoform CRA_a [Homo sapiens]
Length = 367
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 144 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP-----FRAFAFVTFADDQIAQSLCG 198
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 199 EDLIIKGISVHISNAEP 215
>gi|342887592|gb|EGU87074.1| hypothetical protein FOXB_02468 [Fusarium oxysporum Fo5176]
Length = 541
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q KIFVG + QE T ++ + YF++FGR++D + D RGFGFVTF E D
Sbjct: 199 QEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGVD 258
Query: 142 RVSRRSHEICGQQVAIDSATP 162
EI G+ + + A P
Sbjct: 259 ACINVPLEIHGKPIEVKKAQP 279
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 69 DHPGSFYGR-GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHR 127
D P YG ++S + K+F+G L E T + LR YFS+FG +++ V +D R
Sbjct: 101 DAPTPPYGTVHKASAKEDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSR 160
Query: 128 GFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD 165
GFGF+TF + + V + H + G+ + A P D+
Sbjct: 161 GFGFLTFKDAKTVNIVMVKEHFLDGKIIDPKRAIPRDE 198
>gi|403263350|ref|XP_003924000.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Saimiri boliviensis boliviensis]
Length = 306
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 91 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 150
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 151 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 206
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 242 KKYHNVGLSKCEIKVAM 258
>gi|38198639|ref|NP_938178.1| TAR DNA-binding protein 43 [Danio rerio]
gi|27882272|gb|AAH44405.1| TAR DNA binding protein, like [Danio rerio]
gi|182888816|gb|AAI64253.1| Tardbpl protein [Danio rerio]
Length = 303
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 16/111 (14%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
+K+FVGR ++ TA++LR++F ++G + DV++PK R F FVTFA++ VA
Sbjct: 196 SRKVFVGRCTEDMTADELRQFFMQYGEVTDVFIPK-----PFRAFAFVTFADDQVA---- 246
Query: 145 RRSHEICGQQVAID-SATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMY 194
+CG+ + I ++ + +A P N N F + G + M+
Sbjct: 247 ---QSLCGEDLIIKGTSVHISNAEPKHN---NIHHLFSNFPGRSPSLAAMF 291
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q+ I +G LP + T +DL+ YF FG ++ V V +D K +GFGFV F +
Sbjct: 102 QKTSDLIVLG-LPWKTTEQDLKDYFGTFGEVIMVQVKRDAKSGNSKGFGFVRFTDYETQI 160
Query: 142 RVSRRSHEICGQQVAIDSATP-----LDDAGPSQ 170
+V + H I G+ D P L+ AGP +
Sbjct: 161 KVMSQRHMIDGRWC--DCKLPNSKYFLEQAGPDE 192
>gi|453084738|gb|EMF12782.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 536
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG + Q+AT +D +F +FGR+LD + D RGFGFVTF E+ +R
Sbjct: 187 KIFVGGVSQDATEQDFEAFFQKFGRVLDATLMMDKDTGRPRGFGFVTFDNEMAVERTLEG 246
Query: 147 SHEICGQQVAIDSATP 162
I G+ + + A P
Sbjct: 247 PLAILGKPIEVKRAQP 262
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T + L+ YFS+FG +++ V +D RGFGF+TF + + V +
Sbjct: 103 KMFIGGLNWETTDQSLKDYFSQFGEVIECTVMRDGATGRSRGFGFLTFRDPKTVNTVMVK 162
Query: 147 SHEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 163 EHSLDGKLIDPKRAIPRDE 181
>gi|74001695|ref|XP_848950.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Canis lupus familiaris]
Length = 306
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 91 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 150
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 151 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 206
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 242 KKYHNVGLSKCEIKVAM 258
>gi|2773158|gb|AAB96683.1| heterogeneous nuclear ribonucleoprotein D0B [Homo sapiens]
Length = 298
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 83 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 142
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 143 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 198
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 174 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 233
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 234 KKYHNVGLSKCEIKVAM 250
>gi|393910199|gb|EJD75782.1| hypothetical protein LOAG_17145 [Loa loa]
Length = 355
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD-RVS 144
+K+F+G L E T E LR+Y+S++G ++D V +DP+ RGFGFVTFA +A+ ++
Sbjct: 55 RKLFIGGLSHETTDEQLRQYYSQWGTVVDCIVIRDPQTKYSRGFGFVTFATIQMAEAAMA 114
Query: 145 RRSHEICGQQVAIDSATPLDDAGP 168
R H I + V A P + P
Sbjct: 115 DRPHTINNKVVDPKRAIPREQMSP 138
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 64 APTLYDHPGSFYGRGESSQRIGKKIFVGRLPQE-ATAEDLRRYFSRFGRILDVYVPKDPK 122
+P L +HP SF E G K+ + + T +DLR+YF FG + V + +P
Sbjct: 137 SPLLPNHPPSFL---EIEPDPGCKLSLSGIHWAWHTVDDLRQYFDNFGTVEQVEILGNP- 192
Query: 123 RTGHRGFGFVTFAEEVVADRVSR--RSHEICGQQVAI 157
RG GFV F + AD+ + H I GQ+ I
Sbjct: 193 ----RGLGFVVFESKPSADKCLEHGKIHIINGQKCEI 225
>gi|258574483|ref|XP_002541423.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
gi|237901689|gb|EEP76090.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
Length = 341
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG + Q+AT +D +++F +FGR++D + D RGFGFVTF E + +
Sbjct: 84 KIFVGGVSQDATEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQ 143
Query: 147 SHEICGQQVAIDSATP 162
EI G+ + + A P
Sbjct: 144 PLEILGKPIEVKKAQP 159
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+F+G L E T + L+ YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDAKTVNTVMVKE 60
Query: 148 HEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|116197887|ref|XP_001224755.1| hypothetical protein CHGG_07099 [Chaetomium globosum CBS 148.51]
gi|88178378|gb|EAQ85846.1| hypothetical protein CHGG_07099 [Chaetomium globosum CBS 148.51]
Length = 886
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 42/81 (51%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q KIFVG + QE T + R YF++FGR++D + D RGFGFVTF E D
Sbjct: 469 QEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVD 528
Query: 142 RVSRRSHEICGQQVAIDSATP 162
EI G+ + + A P
Sbjct: 529 ACLATPLEIHGKPIEVKKAQP 549
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 66 TLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTG 125
T DH +F GE++ +K+F+G L E T + LR YFS+FG +L+ V +D
Sbjct: 376 TTPDHGDNF---GENT----RKMFIGGLNWETTDQSLRDYFSQFGEVLECTVMRDGATGR 428
Query: 126 HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD 165
RGFGF+TF + + V + H + G+ + A P D+
Sbjct: 429 SRGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPRDE 468
>gi|8778468|gb|AAF79476.1|AC022492_20 F1L3.34 [Arabidopsis thaliana]
Length = 392
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVG + E TAE YF +FG ++D + D RGFGFVTFA+ VA++V
Sbjct: 89 RKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLE 148
Query: 146 RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGP------MRTYGRMYGSLDF 199
H I ++V + P D + + F G P ++ Y +YG +
Sbjct: 149 EDHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGDIIE 208
Query: 200 DDWGYGMGSGRPSRG 214
Y +GR SRG
Sbjct: 209 HQIMYDHHTGR-SRG 222
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+KIFVG LP ++L+ YF +G I++ + D RGFGFVTF E DR+
Sbjct: 180 RKIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFS 239
Query: 146 --RSHEICGQQVAIDSATP 162
+ HE+ +QV I A P
Sbjct: 240 DGKVHELGDKQVEIKRAEP 258
>gi|355694913|gb|AER99827.1| heteroproteinous nuclear ribonucleoprotein A/B [Mustela putorius
furo]
Length = 95
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L EAT E +R YF FG I + +P DPK RGF F+TF EE +V
Sbjct: 26 KKIFVGGLNPEATEEKIREYFREFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 85
Query: 145 RRSHEICGQQ 154
++ H I G +
Sbjct: 86 KKFHTISGSK 95
>gi|71894865|ref|NP_001026049.1| TAR DNA-binding protein 43 [Gallus gallus]
gi|82233907|sp|Q5ZLN5.1|TADBP_CHICK RecName: Full=TAR DNA-binding protein 43; Short=TDP-43
gi|53129069|emb|CAG31358.1| hypothetical protein RCJMB04_5g9 [Gallus gallus]
Length = 414
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ TA++L+++F+++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELQQFFAQYGEVVDVFIPKP-----FRAFAFVTFADDQVAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F +
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIK-TGHSKGFGFVRFTDYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|395834191|ref|XP_003790095.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Otolemur garnettii]
Length = 306
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 91 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 150
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 151 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 206
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 242 KKYHNVGLSKCEIKVAM 258
>gi|42542491|gb|AAH66430.1| Tardbpl protein [Danio rerio]
Length = 298
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 16/111 (14%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
+K+FVGR ++ TA++LR++F ++G + DV++PK R F FVTFA++ VA
Sbjct: 191 SRKVFVGRCTEDMTADELRQFFMQYGEVTDVFIPK-----PFRAFAFVTFADDQVA---- 241
Query: 145 RRSHEICGQQVAID-SATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMY 194
+CG+ + I ++ + +A P N N F + G + M+
Sbjct: 242 ---QSLCGEDLIIKGTSVHISNAEPKHN---NIHHLFSNFPGRSPSLAAMF 286
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q+ I +G LP + T +DL+ YF FG ++ V V +D K +GFGFV F +
Sbjct: 102 QKTSDLIVLG-LPWKTTEQDLKDYFGTFGEVIMVQVKRDAKSGNSKGFGFVRFTDYETQI 160
Query: 142 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P AGP +
Sbjct: 161 KVMSQRHMIDGRWC--DCKLPNSKAGPDE 187
>gi|413954077|gb|AFW86726.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 401
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG +P T + L+ +FS +G++++ + D RGFGFVTF E +RV
Sbjct: 181 KKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMS 240
Query: 146 --RSHEICGQQVAIDSATP 162
R H++ G+QV I A P
Sbjct: 241 EGRMHDLGGKQVEIKKAEP 259
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + E T E ++F ++G I D + KD RGFGFVTF++ V DRV
Sbjct: 94 KVFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLED 153
Query: 147 SHEICGQQVAIDSATP 162
H I G+ V + P
Sbjct: 154 EHVIDGRTVEVKRTVP 169
>gi|357124085|ref|XP_003563737.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform 1 [Brachypodium distachyon]
Length = 410
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG + E T E ++F ++G I D + KD RGFGFVTF++ V DRV
Sbjct: 84 KIFVGGVAWETTEETFSKHFQKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDRVLED 143
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V + P ++
Sbjct: 144 EHTIDGRTVEVKRTVPREE 162
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+KIFVG +P T L+ +FS +G++ + + D RGFGFVTF E +RV
Sbjct: 172 RKIFVGGIPTSLTEGKLKEHFSSYGKVEEHQIMVDHSTGRSRGFGFVTFESEDAVERVMS 231
Query: 146 --RSHEICGQQVAIDSATPLDDAG 167
R H++ G+QV I A P G
Sbjct: 232 EGRMHDLGGKQVEIKRAEPKKPGG 255
>gi|133256|sp|P21522.1|ROA1_SCHAM RecName: Full=Heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog
gi|10107|emb|CAA38481.1| mammalian A1, A2 /B1 hnRNP homologue [Schistocerca americana]
Length = 342
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVS 144
+K+F+G L T E L+++F ++G I+DV V KDPK RGFGF+T++ +V D +
Sbjct: 17 RKLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQN 76
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPM-----RTYGRMYGSL 197
R H++ G+ V A P + G + GG M R Y + YG++
Sbjct: 77 ARPHKVDGRVVEPKRAVPRTEIGRPEAGATVKKLFVGGIKEEMEENDLRDYFKQYGTV 134
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 71 PGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFG 130
P + GR E+ + KK+FVG + +E DLR YF ++G ++ + D + RGF
Sbjct: 94 PRTEIGRPEAGATV-KKLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRGFA 152
Query: 131 FVTFAEEVVADRVS-RRSHEICGQQVAIDSATP 162
FV F + D++ R+H+I G+ + + A P
Sbjct: 153 FVEFDDYDPVDKICLSRNHQIRGKHIDVKKALP 185
>gi|148230364|ref|NP_001091533.1| heterogeneous nuclear ribonucleoprotein D0 [Bos taurus]
gi|146231918|gb|ABQ13034.1| heterogeneous nuclear ribonucleoprotein D [Bos taurus]
gi|296486390|tpg|DAA28503.1| TPA: heterogeneous nuclear ribonucleoprotein D [Bos taurus]
Length = 306
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 91 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 150
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 151 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 206
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 242 KKYHNVGLSKCEIKVAM 258
>gi|413943841|gb|AFW76490.1| hypothetical protein ZEAMMB73_698498 [Zea mays]
Length = 413
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG +P T + L+ +FS +G++++ + D RGFGFVTF E +RV
Sbjct: 189 KKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMS 248
Query: 146 --RSHEICGQQVAIDSATP 162
R H++ G+QV I A P
Sbjct: 249 EGRMHDLGGKQVEIKKAEP 267
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG + E T E ++F ++G I D + KD RGFGFVTF++ V DRV
Sbjct: 101 KIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLED 160
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V + P ++
Sbjct: 161 EHVIDGRTVEVKRTVPKEE 179
>gi|226503497|ref|NP_001145761.1| uncharacterized protein LOC100279268 [Zea mays]
gi|219884331|gb|ACL52540.1| unknown [Zea mays]
Length = 413
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG +P T + L+ +FS +G++++ + D RGFGFVTF E +RV
Sbjct: 189 KKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMS 248
Query: 146 --RSHEICGQQVAIDSATP 162
R H++ G+QV I A P
Sbjct: 249 EGRMHDLGGKQVEIKKAEP 267
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG + E T E ++F ++G I D + KD RGFGFVTF++ V DRV
Sbjct: 101 KIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLED 160
Query: 147 SHEICGQQVAIDSATPLDD 165
H I G+ V + P ++
Sbjct: 161 EHVIDGRTVEVKRTVPKEE 179
>gi|30682553|ref|NP_683559.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11994764|dbj|BAB03120.1| unnamed protein product [Arabidopsis thaliana]
gi|19347908|gb|AAL85976.1| unknown protein [Arabidopsis thaliana]
gi|21689785|gb|AAM67536.1| unknown protein [Arabidopsis thaliana]
gi|62320244|dbj|BAD94504.1| hypothetical protein [Arabidopsis thaliana]
gi|332641794|gb|AEE75315.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 358
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIF+G L ++ T ++F ++G I D + +D RGFGF+TFA+ V D+V
Sbjct: 20 KIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIED 79
Query: 147 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG 182
+H I G+QV I P AG +Q+ + + F G
Sbjct: 80 THVINGKQVEIKRTIP-KGAGGNQSKDIKTKKIFVG 114
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KKIFVG +P T ++L+ +F+++G +++ V +D + RGFGFV F E V D +
Sbjct: 109 KKIFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLS 168
Query: 146 RSHEI--CGQQVAIDSATP 162
+ + I QV I A P
Sbjct: 169 KGNMIDMADTQVEIKKAEP 187
>gi|14110414|ref|NP_002129.2| heterogeneous nuclear ribonucleoprotein D0 isoform c [Homo sapiens]
gi|114594009|ref|XP_001143722.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Pan troglodytes]
gi|395735083|ref|XP_003776519.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Pongo abelii]
gi|402869389|ref|XP_003898745.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Papio anubis]
gi|870745|dbj|BAA09523.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
gi|2815613|gb|AAC23475.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|18645125|gb|AAH23977.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|19683928|gb|AAH26015.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|119626282|gb|EAX05877.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|119626286|gb|EAX05881.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|119626287|gb|EAX05882.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|208966456|dbj|BAG73242.1| heterogeneous nuclear ribonucleoprotein D [synthetic construct]
gi|380783617|gb|AFE63684.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|383417963|gb|AFH32195.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|384940050|gb|AFI33630.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|410265342|gb|JAA20637.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
gi|410292488|gb|JAA24844.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 306
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 91 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 150
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 151 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 206
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 242 KKYHNVGLSKCEIKVAM 258
>gi|410351151|gb|JAA42179.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 307
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 92 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 151
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 152 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 207
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 183 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 242
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 243 KKYHNVGLSKCEIKVAM 259
>gi|367014029|ref|XP_003681514.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
gi|359749175|emb|CCE92303.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
Length = 547
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T + LR YFS++G+++D+ + KD RGFGF+TF E D V +
Sbjct: 158 KMFIGGLNWETTEDTLRDYFSKYGKVIDLKIMKDTNTGRSRGFGFLTFDEPSSVDEVVKT 217
Query: 147 SHEICGQQVAIDSATP 162
H + G+ + A P
Sbjct: 218 QHILDGKVIDPKRAIP 233
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG + + ++ +F+++G I+D + D RGFGFVT+ DRV +
Sbjct: 242 KIFVGGIGADVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQN 301
Query: 147 SH-EICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMY 194
+ G+++ I A P Q +AA+ F G PM +MY
Sbjct: 302 KFIDFKGKKIEIKRAEPRHMQKQQQGGDTSAAQGFPGMANPM---AQMY 347
>gi|350401887|ref|XP_003486296.1| PREDICTED: hypothetical protein LOC100748395 [Bombus impatiens]
Length = 378
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVS 144
+K+F+G L T + L+++F ++G I+DV V KDPK RGFGF+T++ +V D +
Sbjct: 17 RKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQN 76
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG-----PMRTYGRMYGSLD 198
R H++ G+ V A P + G + GG +R Y + YGS++
Sbjct: 77 ARPHKVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSIN 135
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 71 PGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFG 130
P GR E+ + KK+FVG L + EDLR+YF +G I + + D + RGFG
Sbjct: 94 PRQEIGRPEAGATV-KKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFG 152
Query: 131 FVTFAEEVVADRVS-RRSHEICGQQVAIDSA 160
FV F + D++ +R+H+I G+ V + A
Sbjct: 153 FVEFDDYDPVDKICLQRNHQIRGKHVDVKKA 183
>gi|56682933|ref|NP_001008546.1| TAR DNA-binding protein 43 isoform 4 [Mus musculus]
gi|33086854|gb|AAP92690.1| TARDBP S8 [Mus musculus]
Length = 302
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK-----PFRAFAFVTFADDKVAQSLC 244
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPM 187
I G V I +A P ++ N + + FGG G +
Sbjct: 245 GEDLIIKGISVHISNAEPKHNS----NRQLERSGRFGGNPGIL 283
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|340718466|ref|XP_003397688.1| PREDICTED: hypothetical protein LOC100643287 [Bombus terrestris]
Length = 379
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVS 144
+K+F+G L T + L+++F ++G I+DV V KDPK RGFGF+T++ +V D +
Sbjct: 17 RKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQN 76
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG-----PMRTYGRMYGSLD 198
R H++ G+ V A P + G + GG +R Y + YGS++
Sbjct: 77 ARPHKVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSIN 135
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 71 PGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFG 130
P GR E+ + KK+FVG L + EDLR+YF +G I + + D + RGFG
Sbjct: 94 PRQEIGRPEAGATV-KKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFG 152
Query: 131 FVTFAEEVVADRVS-RRSHEICGQQVAIDSA 160
FV F + D++ +R+H+I G+ V + A
Sbjct: 153 FVEFDDYDPVDKICLQRNHQIRGKHVDVKKA 183
>gi|194388816|dbj|BAG61425.1| unnamed protein product [Homo sapiens]
Length = 330
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 107 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP-----FRAFAFVTFADDQIAQSLCG 161
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 162 EDLIIKGISVHISNAEP 178
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH RGFGFV F E
Sbjct: 17 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLK-TGHSRGFGFVRFTEYETQ 74
Query: 141 DRVSRRSHEICG 152
+V + H I G
Sbjct: 75 VKVMSQRHMIDG 86
>gi|181914|gb|AAA35781.1| DNA-binding protein [Homo sapiens]
Length = 328
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 70 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 129
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAA----------ETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 130 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 185
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RG F+TF EE ++
Sbjct: 161 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGLCFITFKEEEPVKKIME 220
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 221 KKYHNVGLSKCEIKVAM 237
>gi|195390403|ref|XP_002053858.1| GJ23111 [Drosophila virilis]
gi|194151944|gb|EDW67378.1| GJ23111 [Drosophila virilis]
Length = 382
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+F+G L T E L+ +F ++G I+DV V KDPK RGFGF+T+++ + D
Sbjct: 25 RKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQN 84
Query: 146 -RSHEICGQQVAIDSATP 162
R H+I G+ V A P
Sbjct: 85 ARPHKIDGRTVEPKRAVP 102
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS- 144
KK+FVG L + E LR YF FG+I+ V + D RGF F+ F + D++
Sbjct: 116 KKLFVGGLRDDHDEECLREYFKEFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIIL 175
Query: 145 RRSHEICGQQVAIDSATPLDD 165
+++H I + + + A D
Sbjct: 176 QKTHNIKNKTLDVKKAIAKQD 196
>gi|310792726|gb|EFQ28187.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 445
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%)
Query: 81 SQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVA 140
Q KIFVG + QE T ++ + YF++FGR++D + D RGFGFVTF E
Sbjct: 78 EQEKTSKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGV 137
Query: 141 DRVSRRSHEICGQQVAIDSATP 162
D S EI G+ + + A P
Sbjct: 138 DACLSTSLEIHGKPIEVKKAQP 159
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+F+G L E T + LR YFS+FG +++ V +D RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFRDPKTVNIVMVKE 60
Query: 148 HEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 61 HFLDGKIIDPKRAIPRDE 78
>gi|431906336|gb|ELK10533.1| TAR DNA-binding protein 43 [Pteropus alecto]
Length = 391
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ TA++L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 168 RKVFVGRCTEDMTADELQQFFCQYGEVVDVFIPKP-----FRAFAFVTFADDQVAQSLCG 222
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 223 EDLIIKGISVHISNAEP 239
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAE 136
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIK-TGHSKGFGFVRFTE 154
>gi|341874087|gb|EGT30022.1| hypothetical protein CAEBREN_23175 [Caenorhabditis brenneri]
Length = 335
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 26/155 (16%)
Query: 70 HPGSFYGRGESSQRIG------------KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV 117
HP F+ Q++G +K+F+G L + T E L YFS++G ++D V
Sbjct: 42 HPYEFHQMLRQFQQMGMGQYQHDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIV 101
Query: 118 PKDPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD------------ 164
+DP RGFGFVTFA A+ ++ R H++ G+ V A P +
Sbjct: 102 IRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFE 161
Query: 165 -DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLD 198
D P ++N +R Y +G+LD
Sbjct: 162 TDPAPGCKLLLNGITHGVHSVDSLRVYFETFGTLD 196
>gi|326932427|ref|XP_003212319.1| PREDICTED: TAR DNA-binding protein 43-like [Meleagris gallopavo]
Length = 414
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ TA++L+++F+++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELQQFFAQYGEVVDVFIPKP-----FRAFAFVTFADDQVAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F +
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIK-TGHSKGFGFVRFTDYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|414883456|tpg|DAA59470.1| TPA: hypothetical protein ZEAMMB73_595283 [Zea mays]
gi|414883457|tpg|DAA59471.1| TPA: hypothetical protein ZEAMMB73_595283 [Zea mays]
gi|414883458|tpg|DAA59472.1| TPA: hypothetical protein ZEAMMB73_595283 [Zea mays]
Length = 374
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 78 GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEE 137
G S KK+F+G L T ++ R YF FG + DV V D + RGFGFVTF E
Sbjct: 133 GNSVSYDSKKVFIGGLRDNITEKEFRAYFETFGTVTDVVVIYDSATSRSRGFGFVTFDSE 192
Query: 138 VVADRVSRRS-HEICGQQVAIDSATPLDD 165
+V R+S H++ G +V A P D+
Sbjct: 193 EAVGKVMRQSFHDLNGTKVEAKIAIPKDE 221
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADRV- 143
+K+FVG +P A +LR +FSRFG + V V +D + TGH RGFGFV F EE A
Sbjct: 14 RKLFVGGIPAGAQEPELRAHFSRFGEVRSVIVMRD-RETGHGRGFGFVEFEEEAAAGTAL 72
Query: 144 ---SRRSHEICGQQVAIDSA 160
+ H +CG+ V + A
Sbjct: 73 GDGEKLKHFLCGRMVDVKRA 92
>gi|302914266|ref|XP_003051103.1| hypothetical protein NECHADRAFT_41418 [Nectria haematococca mpVI
77-13-4]
gi|256732041|gb|EEU45390.1| hypothetical protein NECHADRAFT_41418 [Nectria haematococca mpVI
77-13-4]
Length = 546
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q KIFVG + QE T ++ + YF++FGR++D + D RGFGFVTF E D
Sbjct: 204 QEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVD 263
Query: 142 RVSRRSHEICGQQVAIDSATP 162
EI G+ + + A P
Sbjct: 264 ACINVPLEIHGKPIEVKKAQP 284
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 44 GGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLR 103
GG G+ + S + + P Y G+ + ++S + K+F+G L E T + LR
Sbjct: 79 GGGGSTAGHTSQVATHDDVPTPPPY---GTVH---KASAKEDGKMFIGGLNWETTDQSLR 132
Query: 104 RYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVA 156
YFS+FG +++ V +D RGFGF+TF + + V + H + G+ V+
Sbjct: 133 DYFSQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMVKEHFLDGKIVS 185
>gi|116256514|ref|NP_031542.2| heterogeneous nuclear ribonucleoprotein D0 isoform c [Mus musculus]
gi|29145079|gb|AAH49098.1| Heterogeneous nuclear ribonucleoprotein D [Mus musculus]
gi|148688366|gb|EDL20313.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_c [Mus
musculus]
Length = 306
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVV 139
++QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 91 AAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESES 150
Query: 140 ADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 151 VDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 206
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 242 KKYHNVGLSKCEIKVAM 258
>gi|452840783|gb|EME42721.1| hypothetical protein DOTSEDRAFT_73510 [Dothistroma septosporum
NZE10]
Length = 529
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG + Q+AT D + +F +FGR+LD + D RGFGFVTF ++ +R
Sbjct: 186 KIFVGGVSQDATESDFKEFFMKFGRVLDATLMMDKDTGRPRGFGFVTFDNDLAVERTLEG 245
Query: 147 SHEICGQQVAIDSATP 162
I G+ + + A P
Sbjct: 246 PLSILGKPIEVKRAQP 261
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T E L+ YFS+FG +++ V +D RGFGF+TF + + V +
Sbjct: 102 KMFIGGLNWETTDESLKNYFSQFGEVIECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 161
Query: 147 SHEICGQQVAIDSATPLDD 165
H++ G+ + A P D+
Sbjct: 162 EHQLDGKLIDPKRAIPRDE 180
>gi|153792009|ref|NP_001093319.1| heterogeneous nuclear ribonucleoprotein A1 [Bombyx mori]
gi|95102934|gb|ABF51408.1| heterogeneous nuclear ribonucleoprotein A1 [Bombyx mori]
Length = 316
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E+S + KK+FV L Q+ EDLR YFS FG I+ V V D + RGFGFV F +
Sbjct: 100 RPEASATV-KKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 158
Query: 137 EVVADRVS-RRSHEICGQQVAIDSATPLDD 165
DRV +++H+I Q + + A D
Sbjct: 159 YDPVDRVCLQQNHQIKDQHLDVKKAISKTD 188
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
+K+F+G L T L+ ++ ++G I+DV V KDPK +GFGF+T+++ + D +
Sbjct: 17 RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN 76
Query: 145 RRSHEICGQQVAIDSATPLDD 165
R H+I G+ V A P ++
Sbjct: 77 NRPHKIDGRIVEPKRAVPREE 97
>gi|383855454|ref|XP_003703227.1| PREDICTED: uncharacterized protein LOC100883215 [Megachile
rotundata]
Length = 378
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVS 144
+K+F+G L T + L+++F ++G I+DV V KDPK RGFGF+T++ +V D +
Sbjct: 17 RKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQN 76
Query: 145 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG-----PMRTYGRMYGSLD 198
R H++ G+ V A P + G + GG +R Y + YGS++
Sbjct: 77 ARPHKVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSIN 135
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 71 PGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFG 130
P GR E+ + KK+FVG L + EDLR+YF +G I + + D + RGFG
Sbjct: 94 PRQEIGRPEAGATV-KKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFG 152
Query: 131 FVTFAEEVVADRVS-RRSHEICGQQVAIDSA 160
FV F + D++ +R+H+I G+ V + A
Sbjct: 153 FVEFDDYDPVDKICLQRNHQIRGKHVDVKKA 183
>gi|209877499|ref|XP_002140191.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555797|gb|EEA05842.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 214
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG LPQ+ T+ L YF ++G ILD V D RGFGFVTF + V D V
Sbjct: 7 KIFVGGLPQQVTSSILLEYFLQYGVILDAIVMYDNISGRSRGFGFVTFKDPSVVDLVQIC 66
Query: 147 S-HEICGQQVAIDSATPLDDAGP-SQNFMMNAA 177
S H + G+ V A+P D P + N N A
Sbjct: 67 SPHILLGKVVDCKRASPRDVIPPINMNIYTNKA 99
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 24/166 (14%)
Query: 3 KDQDSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAA 61
KD V+ + + + H L G V RA+P+ D P M+ A ++ I+
Sbjct: 55 KDPSVVDLVQICSPHILLGKVVDCKRASPR--DVIPPINMNIYTNKAISSEINKD----- 107
Query: 62 LGAPTLYDHPGSFYGRGESSQRIGK---KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP 118
L + T E + ++ K K+FVG LP + + E+ + YF RFG I D +
Sbjct: 108 LNSTT----------ENEMNDKLSKTSSKVFVGGLP-DLSLEEFKIYFQRFGCIKDAVLI 156
Query: 119 KDPKRTGHRGFGFVTFAEEVVADRVSR--RSHEICGQQVAIDSATP 162
D RGFGFVTF V++ +H + G+ V A P
Sbjct: 157 TDKHNGRPRGFGFVTFENSDAVVNVTKHYNNHFLKGKWVECKRALP 202
>gi|194745154|ref|XP_001955057.1| GF18582 [Drosophila ananassae]
gi|190628094|gb|EDV43618.1| GF18582 [Drosophila ananassae]
Length = 357
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+F+G L T E+L+ +F ++G I+DV V KDP+ RGFGF+T++ + D +
Sbjct: 26 RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 85
Query: 146 -RSHEICGQQVAIDSATPLDD 165
R H+I G+ V A P D
Sbjct: 86 SRPHKIDGRVVEPKRAVPRQD 106
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS- 144
KK+FVG L + + LR YF FG I+D+ + D + RGF FV F + D+V
Sbjct: 117 KKLFVGALKDDHDEQSLRDYFQNFGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVL 176
Query: 145 RRSHEICGQQVAIDSATP 162
++ H++ G+ V + A P
Sbjct: 177 QKQHQLKGKMVDVKKALP 194
>gi|870747|dbj|BAA09524.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
Length = 215
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 81 SQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVA 140
+QR K+F+G L + T +DL+ YFS+FG ++D + DP RGFGFV F E
Sbjct: 1 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESV 60
Query: 141 DRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMM----------NAAETFGGYG 184
D+V ++ H++ G+ + A + P + + E FGG+G
Sbjct: 61 DKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFG 115
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-S 144
KKIFVG L + E +R YF FG + + +P D K RGF F+TF EE ++
Sbjct: 91 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 150
Query: 145 RRSHEI----CGQQVAI 157
++ H + C +VA+
Sbjct: 151 KKYHNVGLSKCEIKVAM 167
>gi|410966016|ref|XP_003989534.1| PREDICTED: TAR DNA-binding protein 43 [Felis catus]
Length = 414
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ TA++L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELQQFFCQYGEVVDVFIPKP-----FRAFAFVTFADDQVAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|348571401|ref|XP_003471484.1| PREDICTED: TAR DNA-binding protein 43-like isoform 3 [Cavia
porcellus]
Length = 295
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
+K+FVGR + TA++LR++FS++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTDDMTADELRQFFSQYGEVVDVFIPK-----PFRAFAFVTFADDQVAQSLC 244
Query: 145 RRSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 245 GEDLIIKGISVHISNAEP 262
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|195113429|ref|XP_002001270.1| GI10692 [Drosophila mojavensis]
gi|193917864|gb|EDW16731.1| GI10692 [Drosophila mojavensis]
Length = 379
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+F+G L T E L+ +F ++G I+DV V KDPK RGFGF+T+++ + D
Sbjct: 25 RKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQN 84
Query: 146 -RSHEICGQQVAIDSATP 162
R H+I G+ V A P
Sbjct: 85 ARPHKIDGRTVEPKRAVP 102
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS- 144
KK+FVG L + E LR YF FG+I+ V + D RGF F+ F + D++
Sbjct: 116 KKLFVGGLRDDHDEECLREYFKEFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIIL 175
Query: 145 RRSHEICGQQVAIDSATPLDD 165
+++H I + + + A D
Sbjct: 176 QKTHTIKNKTLDVKKAIAKQD 196
>gi|240279923|gb|EER43428.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus H143]
Length = 548
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q KIFVG + QEAT +D +++F +FGR++D + D RGFGFVTF E +
Sbjct: 234 QERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVE 293
Query: 142 RVSRRSHEICGQQVAIDSATP 162
EI G+ + + A P
Sbjct: 294 ATLSGPLEILGKPIEVKKAQP 314
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T + L+ YFS+FG + + V +D RGFGF+TF + + V +
Sbjct: 155 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 214
Query: 147 SHEICGQQVAIDSATPLDD 165
H + G+ + A P D+
Sbjct: 215 EHYLDGKIIDPKRAIPRDE 233
>gi|193620359|ref|XP_001948343.1| PREDICTED: TAR DNA-binding protein 43-like [Acyrthosiphon pisum]
Length = 365
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
+ + ++ +K+F+G++ ++ + L+ YF +FG I D+++P+ HRGF FVTF
Sbjct: 176 SKDKHVNKVPRKVFIGQVSEDVDEDALKNYFIKFGEISDLFLPR-----PHRGFAFVTFT 230
Query: 136 EEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQN 171
+ + A +V + H++ V A P + P N
Sbjct: 231 DPLSAQKVIGKDHKVGDCCVVCTEAIPKKEMAPKWN 266
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+ V LP + T EDL++YF++FG++ + D +G+GFV F + RV
Sbjct: 103 LVVLGLPWKVTEEDLKKYFTKFGQVEYTQIKTDLNGKS-KGYGFVRFKHKKSQVRVMLER 161
Query: 148 HEICGQQVAI 157
H I G+ +
Sbjct: 162 HNIEGRWCDV 171
>gi|391339574|ref|XP_003744123.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Metaseiulus occidentalis]
Length = 334
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 69/149 (46%), Gaps = 28/149 (18%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS- 144
KK+FVG L E AEDLR YF ++G I +V + + RGFGFVTF + D+V
Sbjct: 113 KKLFVGGLSTETEAEDLRNYFGKYGSIEEVIIATERDTGRKRGFGFVTFDDYDSVDKVVL 172
Query: 145 RRSHEICGQQVAIDSAT----------------PLDDAGPSQNFMMNAAET--FGGYGGP 186
+R H I G++ + A P ++GPS ++ A GGY
Sbjct: 173 QRHHMIKGKRTEVKKALSKIEMEKAKRKDSFMGPPHNSGPSHHYRGPPAPPPHRGGYSS- 231
Query: 187 MRTYGRMYGSLDFDDW-GYGMGSGRPSRG 214
R YG D DDW GY G S+G
Sbjct: 232 -RGYG------DSDDWPGYAWGGQPQSQG 253
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 9/128 (7%)
Query: 78 GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEE 137
G S +K+F+G L + L+ Y+S++G I+D V DP RGFGFVT+A+
Sbjct: 15 GSSEPEYMRKLFIGGLDYKTNEVTLKEYYSKWGEIMDCVVMTDPYSKRSRGFGFVTYADS 74
Query: 138 VVADR-VSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG------YGGPMRTY 190
+ D+ +++R H I + V A P + + N M+ + F G +R Y
Sbjct: 75 QMVDQAMAQRPHIIDNRTVEPKRAIPREQSSGDTN--MSVKKLFVGGLSTETEAEDLRNY 132
Query: 191 GRMYGSLD 198
YGS++
Sbjct: 133 FGKYGSIE 140
>gi|308510723|ref|XP_003117544.1| hypothetical protein CRE_00749 [Caenorhabditis remanei]
gi|308238190|gb|EFO82142.1| hypothetical protein CRE_00749 [Caenorhabditis remanei]
Length = 336
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 14/127 (11%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
+K+F+G L E T E L YFS++G ++D V +DP RGFGFVTFA A+ ++
Sbjct: 70 RKLFIGGLSHETTDEQLGNYFSQWGPVVDAIVIRDPTTKHSRGFGFVTFASIFSAESAMN 129
Query: 145 RRSHEICGQQVAIDSATPLD-------------DAGPSQNFMMNAAETFGGYGGPMRTYG 191
R H++ G+ V A P + D P +++ + +R Y
Sbjct: 130 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLSGITSGIHSVDSLRVYF 189
Query: 192 RMYGSLD 198
+G+LD
Sbjct: 190 ETFGTLD 196
>gi|307105138|gb|EFN53389.1| hypothetical protein CHLNCDRAFT_36600 [Chlorella variabilis]
Length = 321
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-- 143
+K+FVG L + T + R YFS+FG +++ + +D RGFGFVTFAE+ A+ V
Sbjct: 93 RKVFVGGLSPDTTEDQFREYFSQFGEVVEAQIMQDHMSGRSRGFGFVTFAEDASAESVFA 152
Query: 144 SRRSHEICGQQVAIDSATP 162
+ H++ G++V + ATP
Sbjct: 153 AGTMHDLGGKKVEVKPATP 171
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L + T E LR +FS++G I++ V +D + RGFGFVTF E AD V
Sbjct: 10 KLFLGGLSWDTTEEKLRDHFSKYGSIVEAVVMRDRQTGRPRGFGFVTFTEPAAADAVVED 69
Query: 147 SHEICGQQVAIDSATPLD 164
H I G+Q+ + P +
Sbjct: 70 VHVIDGRQIDAKKSVPQE 87
>gi|348571399|ref|XP_003471483.1| PREDICTED: TAR DNA-binding protein 43-like isoform 2 [Cavia
porcellus]
Length = 304
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
+K+FVGR + TA++LR++FS++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTDDMTADELRQFFSQYGEVVDVFIPK-----PFRAFAFVTFADDQVAQSLC 244
Query: 145 RRSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 245 GEDLIIKGISVHISNAEP 262
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|195113003|ref|XP_002001061.1| GI10577 [Drosophila mojavensis]
gi|193917655|gb|EDW16522.1| GI10577 [Drosophila mojavensis]
Length = 359
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+F+G L T ++L+ +F ++G+I+DV V KDP+ RGFGF+T++ + D +
Sbjct: 27 RKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQK 86
Query: 146 -RSHEICGQQVAIDSATPLDD 165
R H+I G+ V A P D
Sbjct: 87 ARPHKIDGRVVEPKRAVPRQD 107
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS- 144
KK+FVG L + + LR YF +G I+D+ + D + RGF FV F + D+V
Sbjct: 118 KKLFVGALKDDHDEQSLRDYFQHYGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVL 177
Query: 145 RRSHEICGQQVAIDSATP 162
++ H++ G+ V + A P
Sbjct: 178 QKQHQLNGKMVDVKKALP 195
>gi|254579563|ref|XP_002495767.1| ZYRO0C02574p [Zygosaccharomyces rouxii]
gi|238938658|emb|CAR26834.1| ZYRO0C02574p [Zygosaccharomyces rouxii]
Length = 543
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T + LR YFS++GR++D+ + KD RGFGF+TF D V +
Sbjct: 160 KMFIGGLNWETTEDTLRDYFSKYGRVIDLKIMKDTNTGRSRGFGFLTFDSSSSVDEVVKT 219
Query: 147 SHEICGQQVAIDSATPLDD 165
H + G+ + A P ++
Sbjct: 220 QHILDGKVIDPKRAIPREE 238
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG + + ++ +F+++G I+D + D RGFGFVT+ DRV +
Sbjct: 244 KIFVGGIGADVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQN 303
Query: 147 SH-EICGQQVAIDSATP 162
+ G+++ I A P
Sbjct: 304 KFIDFKGKKIEIKRAEP 320
>gi|195628644|gb|ACG36152.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 384
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
GRG +GK IFVG + E T E ++F ++G I D + KD RGFGFVTF+
Sbjct: 46 GRGAGGDSLGK-IFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFS 104
Query: 136 EEVVADRVSRRSHEICGQQVAIDSATPLDD 165
+ V D+V H I G+ V + P ++
Sbjct: 105 DPSVIDKVLEDDHVIDGRTVEVKRTVPREE 134
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-- 143
+KIF+G LP T ++L+ +FS +G +++ + D RGFGFVTF E +RV
Sbjct: 144 RKIFIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVIS 203
Query: 144 SRRSHEICGQQVAIDSATP 162
R ++ G+QV I A P
Sbjct: 204 EGRMRDLGGKQVEIKKAEP 222
>gi|239051430|ref|NP_001131946.2| uncharacterized protein LOC100193339 [Zea mays]
gi|194695014|gb|ACF81591.1| unknown [Zea mays]
gi|223947685|gb|ACN27926.1| unknown [Zea mays]
gi|238908636|gb|ACF80580.2| unknown [Zea mays]
gi|413926096|gb|AFW66028.1| heterogeneous nuclear ribonucleoprotein A3 isoform 1 [Zea mays]
gi|413926097|gb|AFW66029.1| heterogeneous nuclear ribonucleoprotein A3 isoform 2 [Zea mays]
gi|413926098|gb|AFW66030.1| heterogeneous nuclear ribonucleoprotein A3 isoform 3 [Zea mays]
Length = 384
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 76 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA 135
GRG +GK IFVG + E T E ++F ++G I D + KD RGFGFVTF+
Sbjct: 46 GRGAGGDSLGK-IFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFS 104
Query: 136 EEVVADRVSRRSHEICGQQVAIDSATPLDD 165
+ V D+V H I G+ V + P ++
Sbjct: 105 DPSVIDKVLEDDHVIDGRTVEVKRTVPREE 134
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-- 143
+KIF+G LP T ++L+ +FS +G +++ + D RGFGF+TF E +RV
Sbjct: 144 RKIFIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVIS 203
Query: 144 SRRSHEICGQQVAIDSATP 162
R ++ G+QV I A P
Sbjct: 204 EGRMRDLGGKQVEIKKAEP 222
>gi|195036930|ref|XP_001989921.1| GH19058 [Drosophila grimshawi]
gi|193894117|gb|EDV92983.1| GH19058 [Drosophila grimshawi]
Length = 379
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+F+G L T E L+ +F ++G I+DV V KDPK RGFGF+T+++ + D
Sbjct: 25 RKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQN 84
Query: 146 -RSHEICGQQVAIDSATP 162
R H+I G+ V A P
Sbjct: 85 ARPHKIDGRTVEPKRAVP 102
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS- 144
KK+FVG L + E LR YF FG+I+ V + D RGF F+ F + D++
Sbjct: 116 KKLFVGGLRDDHDEECLREYFKEFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIIL 175
Query: 145 RRSHEICGQQVAIDSATPLDD 165
+++H I + + + A D
Sbjct: 176 QKTHNIKNKTLDVKKAIAKQD 196
>gi|355763816|gb|EHH62216.1| hypothetical protein EGM_20453 [Macaca fascicularis]
Length = 414
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP-----FRAFAFVTFADDQIAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICG 152
+V + H I G
Sbjct: 159 VKVMSQRHMIDG 170
>gi|302835614|ref|XP_002949368.1| hypothetical protein VOLCADRAFT_104291 [Volvox carteri f.
nagariensis]
gi|300265195|gb|EFJ49387.1| hypothetical protein VOLCADRAFT_104291 [Volvox carteri f.
nagariensis]
Length = 340
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-- 143
KKIFVG L + L++YF ++G +++ V D RGFGFVTF EE ++V
Sbjct: 148 KKIFVGGLAPDTEDVHLKQYFEQYGTVVEALVMVDHNSGRSRGFGFVTFGEESSVEKVFA 207
Query: 144 SRRSHEICGQQVAIDSATP 162
+ + HE+ G+QV + SATP
Sbjct: 208 AGQMHELGGKQVEVKSATP 226
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
G K+F+G L + T E L+ YF ++G + DV V +D + RGFGF+TF + A
Sbjct: 60 GAKLFLGGLSWDTTEEKLKEYFLKYGEVHDVVVMRDRQTRRPRGFGFITFTDPAAAQAAC 119
Query: 145 RRSHEICGQQVAIDSATPLDDAG 167
SH I G+Q+ + P + G
Sbjct: 120 AESHTIDGRQIDAKPSVPHGEGG 142
>gi|130750552|gb|ABO32290.1| TDP43 [Homo sapiens]
Length = 416
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP-----FRAFAFVTFADDQIAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICG 152
+V + H I G
Sbjct: 159 VKVMSQRHMIDG 170
>gi|321476369|gb|EFX87330.1| hypothetical protein DAPPUDRAFT_97182 [Daphnia pulex]
Length = 266
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 83 RIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR 142
++ K+FVGR ++ TA+DLR YF +FG + DV++PK R F FVTF + VA
Sbjct: 190 QVPCKVFVGRCTEDITADDLRDYFCKFGEVTDVFIPK-----PFRAFSFVTFLDPEVAQS 244
Query: 143 VSRRSHEICGQQVAIDSA 160
+ H I G + A++
Sbjct: 245 LCGEDHIIKGSRCALEQV 262
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 52/118 (44%), Gaps = 11/118 (9%)
Query: 69 DHPGSFYG---RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTG 125
DHP + R E + I +G LP + + +DLR YF FG +L V KD K
Sbjct: 88 DHPENSTAKTKRMEMRLKCSDLIVLG-LPWKTSEQDLRVYFENFGELLMAQVKKDAKTGQ 146
Query: 126 HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAG-----PSQNFMMNAAE 178
+GFGF+ FA RV + H I G+ D P AG P + F+ E
Sbjct: 147 SKGFGFIRFANYDSQVRVLSQRHLIDGRWC--DVKIPNSKAGGTPQVPCKVFVGRCTE 202
>gi|297840659|ref|XP_002888211.1| RNA-binding protein 1 [Arabidopsis lyrata subsp. lyrata]
gi|297334052|gb|EFH64470.1| RNA-binding protein 1 [Arabidopsis lyrata subsp. lyrata]
Length = 359
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVS 144
KKIFVG L T E+ + YF RFGR +DV V D RGFGFVT+ +E+ V +
Sbjct: 120 KKIFVGGLSSNTTQEEFKSYFERFGRTIDVVVMHDGVTNKPRGFGFVTYDSEDSVEFVMQ 179
Query: 145 RRSHEICGQQVAIDSATP 162
HE+ ++V + A P
Sbjct: 180 SNFHELSDKRVEVKRAIP 197
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+FVG + +E + EDL++YFSR+G +L V KD RGFGFV FA + +
Sbjct: 7 KLFVGGIGKETSEEDLKQYFSRYGLVLGAVVAKDKVTGISRGFGFVRFANDYDVVKALSG 66
Query: 147 SHEICGQQVAIDSA 160
+H I G+ V + A
Sbjct: 67 THFILGKPVDVRKA 80
>gi|117644607|emb|CAL37794.1| hypothetical protein [synthetic construct]
Length = 414
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP-----FRAFAFVTFADDQIAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICG 152
+V + H I G
Sbjct: 159 VKVMSQRHMIDG 170
>gi|390360718|ref|XP_780859.3| PREDICTED: TAR DNA-binding protein 43-like [Strongylocentrotus
purpuratus]
Length = 476
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGRL + +D+ +YF++ G + DV++PK+ RGF FVT +A +
Sbjct: 194 RKLFVGRLSPDVKEDDIYQYFAKIGEVTDVFIPKE-----FRGFAFVTLENAQIAQSLIG 248
Query: 146 RSHEICGQQVAIDSATPLDDAG 167
+ H I G V I+ A P + G
Sbjct: 249 QDHIINGNSVLINYADPKNKQG 270
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 98 TAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEI 150
T E ++ YFS++G ++ + KDPK +GFGF+ + + + V+ + H+I
Sbjct: 123 TVEGMKDYFSQYGELVMTQLKKDPKGK-SKGFGFIRYRDIESQNAVNNKRHKI 174
>gi|307110580|gb|EFN58816.1| hypothetical protein CHLNCDRAFT_56910 [Chlorella variabilis]
Length = 949
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVADRVSR 145
K+F+G L E T + LR YF +G + + +V D K TG RGFGFV FA+ ++AD+V
Sbjct: 7 KVFIGGLSWETTDQKLRAYFENYGTVQEAFVSYD-KHTGRPRGFGFVVFADPIIADKVIS 65
Query: 146 RSHEICGQQVAIDSATPLDDA 166
H I ++V A P D++
Sbjct: 66 VQHTIDRREVEAKKALPKDES 86
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
KK+FVG L + R YF FG + D V D + RGFGF+TFA+E D V
Sbjct: 102 KKVFVGGLAATVDEDTFRAYFEEFGLVDDAVVMFDHENKRPRGFGFITFADEESVDAVFA 161
Query: 146 RS--HEICGQQVAIDSATPLDDAGPSQNFMMN 175
R I +Q+ I A P D PS + +
Sbjct: 162 RGTIQTIHDKQIEIKRAVPRDSMPPSPRALQH 193
>gi|332250292|ref|XP_003274288.1| PREDICTED: TAR DNA-binding protein 43 [Nomascus leucogenys]
gi|402852911|ref|XP_003891150.1| PREDICTED: TAR DNA-binding protein 43 [Papio anubis]
gi|380783713|gb|AFE63732.1| TAR DNA-binding protein 43 [Macaca mulatta]
gi|384941330|gb|AFI34270.1| TAR DNA-binding protein 43 [Macaca mulatta]
Length = 414
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP-----FRAFAFVTFADDQIAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICG 152
+V + H I G
Sbjct: 159 VKVMSQRHMIDG 170
>gi|195327757|ref|XP_002030584.1| GM24493 [Drosophila sechellia]
gi|194119527|gb|EDW41570.1| GM24493 [Drosophila sechellia]
Length = 343
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 46 YGAYNAYISAAT-RYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 104
+G+YNA + + R+ G P S RG +Q GK +FVGR ++ AEDLR
Sbjct: 155 FGSYNAQMRVLSKRHLIDGRWCEVKVPSS---RGIGNQVPGK-VFVGRCTEDIGAEDLRE 210
Query: 105 YFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSA 160
YFS+FG +++V +PK RGF FVTF + + + H I G V + SA
Sbjct: 211 YFSQFGDVIEVVIPKP-----FRGFSFVTFLDPYIPQLLWGEDHIIKGVSVRVSSA 261
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
Query: 77 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE 136
R E R I +G L + T + R +F +G ++ + +D +GFGFV F
Sbjct: 99 RTEPLLRCFDLIVLG-LSYKTTDQTFREFFETYGDVVKAEIKRDNTSGQSKGFGFVRFGS 157
Query: 137 EVVADRVSRRSHEICGQ--QVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMY 194
RV + H I G+ +V + S+ + + P + F+ E G +R Y +
Sbjct: 158 YNAQMRVLSKRHLIDGRWCEVKVPSSRGIGNQVPGKVFVGRCTEDIGAED--LREYFSQF 215
Query: 195 GSL 197
G +
Sbjct: 216 GDV 218
>gi|197097374|ref|NP_001127597.1| TAR DNA-binding protein 43 [Pongo abelii]
gi|75070499|sp|Q5R5W2.1|TADBP_PONAB RecName: Full=TAR DNA-binding protein 43; Short=TDP-43
gi|55732302|emb|CAH92854.1| hypothetical protein [Pongo abelii]
Length = 414
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP-----FRAFAFVTFADDQIAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICG 152
+V + H I G
Sbjct: 159 VKVMSQRHMIDG 170
>gi|6678271|ref|NP_031401.1| TAR DNA-binding protein 43 [Homo sapiens]
gi|114553910|ref|XP_514380.2| PREDICTED: TAR DNA-binding protein 43 isoform 3 [Pan troglodytes]
gi|397503024|ref|XP_003822136.1| PREDICTED: TAR DNA-binding protein 43 [Pan paniscus]
gi|20140568|sp|Q13148.1|TADBP_HUMAN RecName: Full=TAR DNA-binding protein 43; Short=TDP-43
gi|901998|gb|AAA70033.1| TAR DNA-binding protein-43 [Homo sapiens]
gi|4886441|emb|CAB43367.1| hypothetical protein [Homo sapiens]
gi|47939520|gb|AAH71657.1| TARDBP protein [Homo sapiens]
gi|49065494|emb|CAG38565.1| TARDBP [Homo sapiens]
gi|63100767|gb|AAH95435.1| TAR DNA binding protein [Homo sapiens]
gi|119592076|gb|EAW71670.1| TAR DNA binding protein, isoform CRA_b [Homo sapiens]
gi|119592077|gb|EAW71671.1| TAR DNA binding protein, isoform CRA_b [Homo sapiens]
gi|130750566|gb|ABO32291.1| TDP43 splice variant 1 [Homo sapiens]
gi|167774073|gb|ABZ92471.1| TAR DNA binding protein [synthetic construct]
gi|208965598|dbj|BAG72813.1| TAR DNA binding protein [synthetic construct]
gi|410251008|gb|JAA13471.1| TAR DNA binding protein [Pan troglodytes]
gi|410302770|gb|JAA29985.1| TAR DNA binding protein [Pan troglodytes]
gi|410342291|gb|JAA40092.1| TAR DNA binding protein [Pan troglodytes]
gi|410342293|gb|JAA40093.1| TAR DNA binding protein [Pan troglodytes]
Length = 414
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP-----FRAFAFVTFADDQIAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICG 152
+V + H I G
Sbjct: 159 VKVMSQRHMIDG 170
>gi|399218335|emb|CCF75222.1| unnamed protein product [Babesia microti strain RI]
Length = 436
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
KIFVG LP + T E+ R YF +FG +L+ + D RGFGF+TF V + V RR
Sbjct: 136 KIFVGGLP-DLTNEEFREYFEKFGTVLEATLMVDKNTNKPRGFGFITFESPSVVNEVIRR 194
Query: 147 --SHEICGQQVAIDSATP 162
H + G+ V + ATP
Sbjct: 195 YNEHTLKGKWVEVKKATP 212
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 74 FYGRGESSQRIGK--KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGF 131
+G + ++GK IFVG L Q T E LR++F +G + D V + RGFGF
Sbjct: 22 LWGDQIMASKVGKICHIFVGGLSQVTTQESLRQHFETYGEMTDCVVMVEANSGRSRGFGF 81
Query: 132 VTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAET 179
VTF + V + G++V A P + + + AA+
Sbjct: 82 VTFVSHDALEAVLASKQIVDGKEVDCKKACPREVMNSNNGALPKAAQV 129
>gi|189065487|dbj|BAG35326.1| unnamed protein product [Homo sapiens]
Length = 414
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP-----FRAFAFVTFADDQIAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICG 152
+V + H I G
Sbjct: 159 VKVMSQRHMIDG 170
>gi|195055059|ref|XP_001994440.1| GH17116 [Drosophila grimshawi]
gi|193892203|gb|EDV91069.1| GH17116 [Drosophila grimshawi]
Length = 379
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+F+G L T ++L+ +F ++G+I+DV V KDP+ RGFGF+T++ + D +
Sbjct: 27 RKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQK 86
Query: 146 -RSHEICGQQVAIDSATPLD-----DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 197
R H+I G+ V A P +AG + + A +R Y + YGS+
Sbjct: 87 ARPHKIDGRVVEPKRAVPRQEIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHYGSI 144
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS- 144
KK+FVG L + + LR YF +G I+D+ + D + RGF FV F + D+V
Sbjct: 118 KKLFVGALKDDHDEQSLRDYFQHYGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVL 177
Query: 145 RRSHEICGQQVAIDSATP 162
++ H++ G+ V + A P
Sbjct: 178 QKQHQLNGKMVDVKKALP 195
>gi|168009708|ref|XP_001757547.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691241|gb|EDQ77604.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 93
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + E T E LR YF +G + + + KD RGFGFV FA+ VADRV+
Sbjct: 7 KLFIGGISWETTEEKLRDYFKSYGEVAETVIMKDRATGRARGFGFVIFADPSVADRVAGE 66
Query: 147 SHEICGQQVAIDSAT 161
H I G+ V+ S T
Sbjct: 67 KHTIDGRTVSALSWT 81
>gi|108996989|ref|XP_001102660.1| PREDICTED: TAR DNA-binding protein 43 [Macaca mulatta]
Length = 414
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP-----FRAFAFVTFADDQIAQSLCG 245
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 246 EDLIIKGISVHISNAEP 262
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICG 152
+V + H I G
Sbjct: 159 VKVMSQRHMIDG 170
>gi|318086954|gb|ADV40069.1| putative heterogeneous nuclear ribonucleoprotein isoform A
[Latrodectus hesperus]
Length = 293
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSR 145
K+F+G LP T DLR +FSR+G +++V + D ++ RGFGF++F E+ V +
Sbjct: 107 KVFLGGLPPNCTETDLRSFFSRYGTVVEVVLMYDQEKKKSRGFGFLSFETEDSVKQVCAE 166
Query: 146 RSHEICGQQVAIDSATPLDDAGPSQ 170
+I G+++ A P D PSQ
Sbjct: 167 HFVKINGKKIECKHAEPRDKKRPSQ 191
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAE-EVVADRVSR 145
KIFVG L E T E L+ YFSR+G ++D V K+ + RGFGFVTF + VA +S
Sbjct: 17 KIFVGGLSWETTQEKLQEYFSRYGEVVDCVVMKNSETNRSRGFGFVTFKDVACVAKVLSS 76
Query: 146 RSHEICGQQV 155
HE+ G+ +
Sbjct: 77 GPHEVDGRTI 86
>gi|340730016|ref|XP_003403287.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Bombus
terrestris]
Length = 169
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+F+G L + + E LR YF+++G I +V + KDP RGFGF+TFA+ D+V ++
Sbjct: 23 KMFIGGLSWQTSPESLREYFTKYGDITEVMIMKDPTTRRSRGFGFITFADPASVDKVLAQ 82
Query: 146 RSHEICGQQVAIDSATP 162
+HE+ G+++ A P
Sbjct: 83 GNHELDGKKIDPKVAFP 99
>gi|15226106|ref|NP_180899.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|2459445|gb|AAB80680.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|22530920|gb|AAM96964.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|23198416|gb|AAN15735.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330253737|gb|AEC08831.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 404
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 29/158 (18%)
Query: 8 VENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAPTL 67
++ ++ D H + V V RA +E+ P GR G +NA +R GA
Sbjct: 60 IDRVLQDKHHIDNRDVDVKRAMSREEQ-SPAGRS-----GTFNA-----SRNFDSGANVR 108
Query: 68 YDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHR 127
KKIFVG LP T+++ R YF +G + D + D R
Sbjct: 109 T-----------------KKIFVGGLPPALTSDEFRAYFETYGPVSDAVIMIDQTTQRPR 151
Query: 128 GFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD 164
GFGFV+F E D V ++ H++ G+QV + A P D
Sbjct: 152 GFGFVSFDSEDSVDLVLHKTFHDLNGKQVEVKRALPKD 189
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G + + LR YFS FG +L V V ++ RGFGFV F++ V DRV +
Sbjct: 7 KLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRVLQD 66
Query: 147 SHEICGQQVAIDSATPLDDAGPS-QNFMMNAAETFGGYGGPMRTYGRMYGSL 197
H I + V + A ++ P+ ++ NA+ F G +RT G L
Sbjct: 67 KHHIDNRDVDVKRAMSREEQSPAGRSGTFNASRNFDS-GANVRTKKIFVGGL 117
>gi|358388987|gb|EHK26580.1| hypothetical protein TRIVIDRAFT_77860 [Trichoderma virens Gv29-8]
Length = 525
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVAD 141
Q KIFVG + Q+ T ++ R YF++FGR++D + D RGFGFVTF E D
Sbjct: 202 QEKTSKIFVGGVSQDTTDQEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVD 261
Query: 142 RVSRRSHEICGQQVAIDSATP 162
EI G+ + + A P
Sbjct: 262 ACINVPLEIHGKPIEVKKAQP 282
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRR 146
K+F+G L E T + LR YFS+FG +++ V +D RGFGF+TF + + V +
Sbjct: 113 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDPKTVNIVMVK 172
Query: 147 SHEICGQQVAI 157
H + G+ V++
Sbjct: 173 EHFLDGKIVSL 183
>gi|26350443|dbj|BAC38861.1| unnamed protein product [Mus musculus]
Length = 301
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 85 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVS 144
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK-----PFRAFAFVTFADDKVAQSLC 244
Query: 145 RRSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 245 GEDLIIKGISVHISNAEP 262
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 82 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGH-RGFGFVTFAEEVVA 140
Q+ I +G LP + T +DL+ YFS FG +L V V KD K TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLK-TGHSKGFGFVRFTEYETQ 158
Query: 141 DRVSRRSHEICGQQVAIDSATPLDDAGPSQ 170
+V + H I G+ D P P +
Sbjct: 159 VKVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|432857373|ref|XP_004068664.1| PREDICTED: TAR DNA-binding protein 43-like [Oryzias latipes]
Length = 402
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSR 145
+K+FVGR ++ T +DLR++F ++G + DV++PK R F FVTFA++ VA +
Sbjct: 192 RKVFVGRCTEDMTTDDLRQFFMQYGEVTDVFIPKP-----FRAFAFVTFADDQVAQSLCG 246
Query: 146 RSHEICGQQVAIDSATP 162
I G V I +A P
Sbjct: 247 EDLIIKGVSVHISNAEP 263
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 88 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRS 147
+ V LP + T +DL+ YFS FG ++ V V +D K +GFGFV F E ++V +
Sbjct: 107 LIVLGLPWKTTEQDLKDYFSTFGEVIMVQVKRDAKTGNSKGFGFVRFTEYEAQEKVISQR 166
Query: 148 HEICGQQVAIDSATPLDDAGPSQ 170
H I G+ D P GP +
Sbjct: 167 HMIDGRWC--DCKLPNSKQGPDE 187
>gi|47214361|emb|CAG01206.1| unnamed protein product [Tetraodon nigroviridis]
Length = 256
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 86 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADR-VS 144
KK+FVG L + + E ++ YF FG I ++ +P+DPK RGF F+T+ EE + +
Sbjct: 84 KKVFVGGLNPDTSKEVIQEYFEEFGEIENIELPQDPKTEKRRGFVFITYKEEACVKKALE 143
Query: 145 RRSHEICGQQVAIDSATPLD 164
+ H + G + I A P +
Sbjct: 144 NKFHTVGGSKCEIKIAQPKE 163
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 87 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SR 145
K+FVG L + + +DL+ YF++FG + D + D RGFGF+ F + ++V +
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFNKFGDVTDCTIKMDQGTGRSRGFGFILFKDPASVEKVLEQ 60
Query: 146 RSHEICGQQV 155
+ H++ G+ +
Sbjct: 61 KEHKLDGRVI 70
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.139 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,003,150,471
Number of Sequences: 23463169
Number of extensions: 178927617
Number of successful extensions: 404646
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 10482
Number of HSP's successfully gapped in prelim test: 5475
Number of HSP's that attempted gapping in prelim test: 381016
Number of HSP's gapped (non-prelim): 26840
length of query: 221
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 84
effective length of database: 9,144,741,214
effective search space: 768158261976
effective search space used: 768158261976
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 74 (33.1 bits)