BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027632
(221 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9S834|CLPP5_ARATH ATP-dependent Clp protease proteolytic subunit 5, chloroplastic
OS=Arabidopsis thaliana GN=CLPP5 PE=1 SV=1
Length = 298
Score = 244 bits (624), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/211 (61%), Positives = 157/211 (74%), Gaps = 10/211 (4%)
Query: 1 MAQSCAAALSSTAIF-AAFCNHFPA----ESHSSSLRFSPLRLRKMIVSSNRERKCEKFG 55
MA +C + +S+ F A F + P +S SL F PLR RK + + +
Sbjct: 1 MAHACVSTSASSLRFTAGFVSASPNGSSFDSPKLSLPFEPLRSRKTNKLVSDRKNWKNST 60
Query: 56 VKAAYTSDYSSLDDCESTWKGIWSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNV 115
KA Y+ + + + + +G+WSIR+DL+VPSSPY P YAQG+ GPPPM+ RFQ++
Sbjct: 61 PKAVYSGNLWTPE--IPSPQGVWSIRDDLQVPSSPYFPAYAQGQ---GPPPMVQERFQSI 115
Query: 116 LSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDT 175
+SQLFQ+RIIRCGG V+DDMANIIVAQLLYLDAVDP KDI+MY+NSPGGSVTAGMAIFDT
Sbjct: 116 ISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDT 175
Query: 176 IRHIRPDVSTVCVGLAASMGAFLLSAGTKGK 206
+RHIRPDVSTVCVGLAASMGAFLLSAGTKGK
Sbjct: 176 MRHIRPDVSTVCVGLAASMGAFLLSAGTKGK 206
>sp|Q3MFR5|CLPP1_ANAVT ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena
variabilis (strain ATCC 29413 / PCC 7937) GN=clpP1 PE=3
SV=1
Length = 204
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/97 (67%), Positives = 80/97 (82%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V+ ++AN+IVAQLL+LDA DP KDI +Y+NSPGGSVTAGM IF
Sbjct: 18 DIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIF 77
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
DT++HIRPDV T+C GLAASMGAFLLSAGTKGK +
Sbjct: 78 DTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSL 114
>sp|Q3IF46|CLPP_PSEHT ATP-dependent Clp protease proteolytic subunit OS=Pseudoalteromonas
haloplanktis (strain TAC 125) GN=clpP PE=3 SV=1
Length = 205
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/100 (63%), Positives = 83/100 (83%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GPVED+MAN+I+AQ+L+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKERIIFLTGPVEDNMANLILAQMLFLESENPDKDIFLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
AI+DT+ I+PDVST+CVG AASMGAFLL+AG KGK C
Sbjct: 85 AIYDTMNFIKPDVSTICVGQAASMGAFLLTAGAKGKRFCL 124
>sp|Q24S49|CLPP2_DESHY ATP-dependent Clp protease proteolytic subunit 2
OS=Desulfitobacterium hafniense (strain Y51) GN=clpP2
PE=3 SV=1
Length = 202
Score = 138 bits (347), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 62/96 (64%), Positives = 82/96 (85%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGPV DD+AN++VAQ+L+L+A DP KDI +Y+NSPGGS++AGM
Sbjct: 17 RSYDIYSRLLKDRIIFLGGPVTDDVANLVVAQMLFLEAEDPEKDIFLYINSPGGSISAGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGK 206
AI+DT+++IR DV T+CVGLAASMGAFLL+AG KGK
Sbjct: 77 AIYDTMQYIRADVHTICVGLAASMGAFLLTAGAKGK 112
>sp|Q2JIP1|CLPP2_SYNJB ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus
sp. (strain JA-2-3B'a(2-13)) GN=clpP2 PE=3 SV=1
Length = 200
Score = 138 bits (347), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 82/97 (84%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V+DD+AN+IVAQ+LYL++ DP KDI +Y+NSPGGSV AGMAI+
Sbjct: 17 DIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMAIY 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
DT++HI+PDVST+C+GLAASMGAFLL+ GTKGK +
Sbjct: 77 DTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIAL 113
>sp|Q88KJ0|CLPP_PSEPK ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas
putida (strain KT2440) GN=clpP PE=3 SV=1
Length = 213
Score = 137 bits (345), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 93/128 (72%), Gaps = 6/128 (4%)
Query: 89 SPYIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQ 142
+ YI + + GG PM++ R ++ S+L + R+I GPVED MAN++VAQ
Sbjct: 4 NSYIQQSSDIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQ 63
Query: 143 LLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAG 202
LL+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+AG
Sbjct: 64 LLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAG 123
Query: 203 TKGKYLCF 210
KGK C
Sbjct: 124 AKGKRHCL 131
>sp|A5W635|CLPP_PSEP1 ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas
putida (strain F1 / ATCC 700007) GN=clpP PE=3 SV=1
Length = 213
Score = 137 bits (345), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 93/128 (72%), Gaps = 6/128 (4%)
Query: 89 SPYIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQ 142
+ YI + + GG PM++ R ++ S+L + R+I GPVED MAN++VAQ
Sbjct: 4 NSYIQQSSDIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQ 63
Query: 143 LLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAG 202
LL+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+AG
Sbjct: 64 LLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAG 123
Query: 203 TKGKYLCF 210
KGK C
Sbjct: 124 AKGKRHCL 131
>sp|Q8YXH5|CLPP1_NOSS1 ATP-dependent Clp protease proteolytic subunit 1 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=clpP1 PE=3 SV=1
Length = 204
Score = 137 bits (344), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/97 (64%), Positives = 79/97 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G V+ ++AN+IVAQLL+LDA DP KDI +Y+NSPGGSVTAGM IF
Sbjct: 18 DIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIF 77
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
DT++HIRPDV T+C GLAASMGAFLLSAG KGK +
Sbjct: 78 DTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSL 114
>sp|B0KJG6|CLPP_PSEPG ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas
putida (strain GB-1) GN=clpP PE=3 SV=1
Length = 213
Score = 136 bits (343), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 93/128 (72%), Gaps = 6/128 (4%)
Query: 89 SPYIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQ 142
+ YI + + GG PM++ R ++ S+L + R+I GPVED MAN++VAQ
Sbjct: 4 NSYIQQSSDIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQ 63
Query: 143 LLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAG 202
+L+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+AG
Sbjct: 64 MLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLTAG 123
Query: 203 TKGKYLCF 210
KGK C
Sbjct: 124 AKGKRHCL 131
>sp|B1J692|CLPP_PSEPW ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas
putida (strain W619) GN=clpP PE=3 SV=1
Length = 213
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 93/128 (72%), Gaps = 6/128 (4%)
Query: 89 SPYIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQ 142
+ YI + + GG PM++ R ++ S+L + R+I GPVED MAN++VAQ
Sbjct: 4 NSYIQQSSDIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQ 63
Query: 143 LLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAG 202
+L+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+AG
Sbjct: 64 MLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAG 123
Query: 203 TKGKYLCF 210
KGK C
Sbjct: 124 AKGKRHCL 131
>sp|Q0AWF0|CLPP_SYNWW ATP-dependent Clp protease proteolytic subunit OS=Syntrophomonas
wolfei subsp. wolfei (strain Goettingen) GN=clpP PE=3
SV=1
Length = 200
Score = 136 bits (342), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 83/96 (86%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D +AN+++AQLL+L+A DP+KDI +Y+NSPGGS+TAGM
Sbjct: 17 RSYDIYSRLLKDRIIFLGSGIDDTVANLVIAQLLFLEAEDPDKDISLYINSPGGSITAGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGK 206
AI+DT+++IRPDVST+CVGLAASMGAFLL+AG KGK
Sbjct: 77 AIYDTLQYIRPDVSTICVGLAASMGAFLLAAGKKGK 112
>sp|Q2JV68|CLPP2_SYNJA ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus
sp. (strain JA-3-3Ab) GN=clpP2 PE=3 SV=1
Length = 200
Score = 136 bits (342), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 81/97 (83%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V+DD+AN+IVAQ+LYL++ DP KDI +Y+NSPGGSV AGMAI+
Sbjct: 17 DIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMAIY 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
DT++HI+PDVST+C+GLAASMGAFLL+ G KGK +
Sbjct: 77 DTMQHIQPDVSTICIGLAASMGAFLLAGGAKGKRIAL 113
>sp|B2UX13|CLPP_CLOBA ATP-dependent Clp protease proteolytic subunit OS=Clostridium
botulinum (strain Alaska E43 / Type E3) GN=clpP PE=3
SV=1
Length = 199
Score = 136 bits (342), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 82/96 (85%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V DD +N+IV+QLL+L++ DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RSYDIFSRLLKERIIMLSGEVNDDSSNLIVSQLLFLESEDPDKDISIYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGK 206
AI+DT+++I+PDVST+CVG+AASMGAFLLS+G KGK
Sbjct: 76 AIYDTMQYIKPDVSTICVGMAASMGAFLLSSGAKGK 111
>sp|Q5QXN8|CLPP_IDILO ATP-dependent Clp protease proteolytic subunit OS=Idiomarina
loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR)
GN=clpP PE=3 SV=1
Length = 206
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/129 (51%), Positives = 91/129 (70%), Gaps = 7/129 (5%)
Query: 82 NDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVA 141
+D++ P + +P + G R ++ S+L + R+I C G VED MAN+IVA
Sbjct: 3 SDIQDPMAQLVPMVVEQTSKGE-------RSYDIYSRLLKERVIFCCGQVEDHMANLIVA 55
Query: 142 QLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSA 201
QLL+L++ +P+KDI +Y+NSPGG VTAGMAI+DT+R I+PDVSTVC+G AASMGAFLL+
Sbjct: 56 QLLFLESDNPDKDIYLYINSPGGVVTAGMAIYDTMRFIKPDVSTVCMGQAASMGAFLLAG 115
Query: 202 GTKGKYLCF 210
G +GK C
Sbjct: 116 GAQGKRYCL 124
>sp|Q2JHM1|CLPP1_SYNJB ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus
sp. (strain JA-2-3B'a(2-13)) GN=clpP1 PE=3 SV=1
Length = 203
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 76/93 (81%)
Query: 118 QLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIR 177
+L+Q RI+ G P++D +AN IV +LYL++ DP KDI+MY+NSPGGSVTAGMAI+DT+
Sbjct: 26 RLYQERILFIGEPIDDSLANTIVGVMLYLNSQDPQKDIVMYINSPGGSVTAGMAIYDTMN 85
Query: 178 HIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
HI+PD+ TVCVG AASMGAFLL+AGTKGK
Sbjct: 86 HIKPDIVTVCVGQAASMGAFLLAAGTKGKRFAL 118
>sp|Q2JWJ1|CLPP1_SYNJA ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus
sp. (strain JA-3-3Ab) GN=clpP1 PE=3 SV=1
Length = 203
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 59/94 (62%), Positives = 77/94 (81%)
Query: 117 SQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTI 176
+L+Q RI+ G P++D++AN IV +LYL++ DP KDI+MY+NSPGGSVTAGMAI+DT+
Sbjct: 25 DRLYQERILFIGEPIDDNLANTIVGVMLYLNSQDPQKDIVMYINSPGGSVTAGMAIYDTM 84
Query: 177 RHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
H++PD+ TVCVG AASMGAFLL+AGTKGK
Sbjct: 85 NHVKPDIVTVCVGQAASMGAFLLAAGTKGKRFAL 118
>sp|Q2RL31|CLPP_MOOTA ATP-dependent Clp protease proteolytic subunit OS=Moorella
thermoacetica (strain ATCC 39073) GN=clpP PE=3 SV=1
Length = 199
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 83/100 (83%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D +AN+++AQ+L+L+A DP+KDI +Y+NSPGGS++AGM
Sbjct: 17 RAYDIYSRLLKDRIIFLGSAIDDHVANLVIAQMLFLEAEDPDKDIHLYINSPGGSISAGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
AIFDT+++IRPDVST+CVGLAASMGAFLL+AG KGK
Sbjct: 77 AIFDTMQYIRPDVSTICVGLAASMGAFLLAAGAKGKRFAL 116
>sp|A4XHW0|CLPP_CALS8 ATP-dependent Clp protease proteolytic subunit
OS=Caldicellulosiruptor saccharolyticus (strain ATCC
43494 / DSM 8903) GN=clpP PE=3 SV=1
Length = 195
Score = 134 bits (337), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 82/100 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G + DD+A++IVAQLL+L+A DP+KDI +Y+NSPGGSVTAG
Sbjct: 17 RAYDIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPGGSVTAGF 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
AI+DTI++I+PDVST+CVG+AASMGAFLL+AG KGK
Sbjct: 77 AIYDTIQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFAL 116
>sp|Q5N665|CLPP1_SYNP6 ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus
sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
GN=clpP1 PE=3 SV=1
Length = 197
Score = 134 bits (337), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/93 (68%), Positives = 76/93 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G PV D+AN IVAQLL+L+A DP KDI +Y+NSPGGSV G+ IF
Sbjct: 17 DIYSRLLRERIIFLGEPVTSDVANRIVAQLLFLEAEDPEKDIYLYINSPGGSVYDGLGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGK 206
DT+ HIRPDVSTVCVGLAASMGAFLL+AG KGK
Sbjct: 77 DTMNHIRPDVSTVCVGLAASMGAFLLAAGAKGK 109
>sp|P54415|CLPP1_SYNE7 ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus
elongatus (strain PCC 7942) GN=clpP1 PE=3 SV=1
Length = 197
Score = 134 bits (337), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/93 (68%), Positives = 76/93 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G PV D+AN IVAQLL+L+A DP KDI +Y+NSPGGSV G+ IF
Sbjct: 17 DIYSRLLRERIIFLGEPVTSDVANRIVAQLLFLEAEDPEKDIYLYINSPGGSVYDGLGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGK 206
DT+ HIRPDVSTVCVGLAASMGAFLL+AG KGK
Sbjct: 77 DTMNHIRPDVSTVCVGLAASMGAFLLAAGAKGK 109
>sp|B2TPB9|CLPP_CLOBB ATP-dependent Clp protease proteolytic subunit OS=Clostridium
botulinum (strain Eklund 17B / Type B) GN=clpP PE=3 SV=1
Length = 199
Score = 134 bits (336), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 59/96 (61%), Positives = 81/96 (84%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V DD +N+IV+QLL+L++ DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RSYDIFSRLLKERIIMLSGEVNDDSSNLIVSQLLFLESEDPDKDISIYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGK 206
AI+DT+++I+PDVST+CVG+AASMGAFLLS+G GK
Sbjct: 76 AIYDTMQYIKPDVSTICVGMAASMGAFLLSSGANGK 111
>sp|Q8YQX8|CLPP2_NOSS1 ATP-dependent Clp protease proteolytic subunit 2 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=clpP2 PE=3 SV=1
Length = 232
Score = 134 bits (336), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 63/97 (64%), Positives = 78/97 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G P++D +AN IVAQLL+LDA D KDI +Y+NSPGGSV AGMAI+
Sbjct: 45 DIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAIY 104
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
DTI+ IRPDV T+C GLAASMGAFLL+AGTKGK +
Sbjct: 105 DTIQQIRPDVVTICFGLAASMGAFLLTAGTKGKRMSL 141
>sp|Q8DJZ9|CLPP2_THEEB ATP-dependent Clp protease proteolytic subunit 2
OS=Thermosynechococcus elongatus (strain BP-1) GN=clpP2
PE=3 SV=1
Length = 198
Score = 134 bits (336), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 82/97 (84%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ ++L++ RII G V+D++AN IVA +LYLD+ DP KDI++Y+NSPGGSVTAGMAI+
Sbjct: 22 DIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPGKDIMLYINSPGGSVTAGMAIY 81
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
DT++HI+ DV T+CVGLAASMG+FLL+AGTKGK L
Sbjct: 82 DTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLAL 118
>sp|Q3M726|CLPP3_ANAVT ATP-dependent Clp protease proteolytic subunit 3 OS=Anabaena
variabilis (strain ATCC 29413 / PCC 7937) GN=clpP3 PE=3
SV=2
Length = 214
Score = 133 bits (335), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 63/97 (64%), Positives = 78/97 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G P++D +AN IVAQLL+LDA D KDI +Y+NSPGGSV AGMAI+
Sbjct: 27 DIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAIY 86
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
DTI+ IRPDV T+C GLAASMGAFLL+AGTKGK +
Sbjct: 87 DTIQQIRPDVVTICFGLAASMGAFLLTAGTKGKRMSL 123
>sp|Q5WDK0|CLPP2_BACSK ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus
clausii (strain KSM-K16) GN=clpP2 PE=3 SV=1
Length = 195
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 81/100 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V+D++AN IVAQ+L+L A DP KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIMLGSGVDDNVANSIVAQMLFLQAEDPEKDISLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
AI+DT++ I+PDVST+C+G+AASMGAFLL+AG KGK +
Sbjct: 76 AIYDTMQFIKPDVSTICIGMAASMGAFLLTAGAKGKRMAL 115
>sp|Q8RHJ8|CLPP_FUSNN ATP-dependent Clp protease proteolytic subunit OS=Fusobacterium
nucleatum subsp. nucleatum (strain ATCC 25586 / CIP
101130 / JCM 8532 / LMG 13131) GN=clpP PE=3 SV=1
Length = 193
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 78/100 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G +++ +AN I+AQLLYL+A DP KDIIMY+NSPGGSVT GM
Sbjct: 15 RAYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGSVTDGM 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
AI+DT+ +I+PDV TVCVG AASMGAFLL+AG KGK
Sbjct: 75 AIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFAL 114
>sp|Q15R46|CLPP_PSEA6 ATP-dependent Clp protease proteolytic subunit OS=Pseudoalteromonas
atlantica (strain T6c / ATCC BAA-1087) GN=clpP PE=3 SV=1
Length = 212
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 78/100 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + +I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKENVIFMVGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
AI+DT+ I+PDVSTVC+G AASMGAFLLS G KGK C
Sbjct: 85 AIYDTMNFIKPDVSTVCIGQAASMGAFLLSGGAKGKRYCL 124
>sp|Q4ZVM7|CLPP_PSEU2 ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas
syringae pv. syringae (strain B728a) GN=clpP PE=3 SV=1
Length = 213
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 90/126 (71%), Gaps = 6/126 (4%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFMVGPVEDYMANLIAAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+ G +
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAGGAE 125
Query: 205 GKYLCF 210
GK C
Sbjct: 126 GKRHCL 131
>sp|Q87YR6|CLPP_PSESM ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas
syringae pv. tomato (strain DC3000) GN=clpP PE=3 SV=2
Length = 213
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 90/126 (71%), Gaps = 6/126 (4%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFMVGPVEDYMANLIAAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+ G +
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAGGAE 125
Query: 205 GKYLCF 210
GK C
Sbjct: 126 GKRHCL 131
>sp|Q48KZ0|CLPP_PSE14 ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas
syringae pv. phaseolicola (strain 1448A / Race 6)
GN=clpP PE=3 SV=1
Length = 213
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 90/126 (71%), Gaps = 6/126 (4%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFMVGPVEDYMANLIAAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+ G +
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAGGAE 125
Query: 205 GKYLCF 210
GK C
Sbjct: 126 GKRHCL 131
>sp|Q47XL8|CLPP_COLP3 ATP-dependent Clp protease proteolytic subunit OS=Colwellia
psychrerythraea (strain 34H / ATCC BAA-681) GN=clpP PE=3
SV=1
Length = 220
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 80/100 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+I+AQLL+L++ P+KDI +Y+NSPGGSVTAGM
Sbjct: 40 RSYDIYSRLLKERVIFLCGQVEDHMANLIIAQLLFLESESPDKDIYLYINSPGGSVTAGM 99
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
AI+DT++ I+P++STVC+G AASMGAFLLS G KGK C
Sbjct: 100 AIYDTMKFIKPNISTVCIGQAASMGAFLLSGGEKGKRYCL 139
>sp|Q6FEP8|CLPP_ACIAD ATP-dependent Clp protease proteolytic subunit OS=Acinetobacter sp.
(strain ADP1) GN=clpP PE=3 SV=1
Length = 201
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 80/97 (82%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED+MAN+IVAQ+L+L+A +P+KDI +Y+NSPGGSVTAGMAI+
Sbjct: 26 DIFSRLLRERVIFLTGEVEDNMANLIVAQMLFLEAENPDKDIHLYINSPGGSVTAGMAIY 85
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
DT++ I+PDV T C+G AASMGAFLL+AG KGK C
Sbjct: 86 DTMQFIKPDVVTYCMGQAASMGAFLLNAGAKGKRYCL 122
>sp|Q9K709|CLPP1_BACHD ATP-dependent Clp protease proteolytic subunit 1 OS=Bacillus
halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344
/ JCM 9153 / C-125) GN=clpP1 PE=3 SV=1
Length = 194
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 82/100 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IVAQLL+L A DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIMLGTAIDDNVANSIVAQLLFLQAEDPDKDISLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
AI+DT+++I+P+VST+C+G+AASMGAFLL+AG KGK
Sbjct: 76 AIYDTMQYIKPNVSTICIGMAASMGAFLLAAGAKGKRFAL 115
>sp|A6SY74|CLPP_JANMA ATP-dependent Clp protease proteolytic subunit OS=Janthinobacterium
sp. (strain Marseille) GN=clpP PE=3 SV=1
Length = 210
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 81/96 (84%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GPV D MAN+IVAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 32 RAYDIYSRLLKERIIFLVGPVNDQMANLIVAQLLFLESENPDKDISLYINSPGGSVSAGM 91
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGK 206
AI+DT++ I+P+VST+C GLAASMGAFLL+AG KGK
Sbjct: 92 AIYDTMQFIKPNVSTLCTGLAASMGAFLLAAGEKGK 127
>sp|Q0ST53|CLPP_CLOPS ATP-dependent Clp protease proteolytic subunit OS=Clostridium
perfringens (strain SM101 / Type A) GN=clpP PE=3 SV=1
Length = 194
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 81/100 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D AN++VAQLL+L++ DP+KDI +Y+NSPGGS+T+GM
Sbjct: 17 RSYDIFSRLLKDRIIMLSGEVNDVTANLVVAQLLFLESEDPDKDIHLYINSPGGSITSGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
AI+DT+++I+PDVST+C+G+AASMGAFLLS+G KGK
Sbjct: 77 AIYDTMQYIKPDVSTICIGMAASMGAFLLSSGAKGKRFAL 116
>sp|Q8XKK1|CLPP_CLOPE ATP-dependent Clp protease proteolytic subunit OS=Clostridium
perfringens (strain 13 / Type A) GN=clpP PE=3 SV=1
Length = 194
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 81/100 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D AN++VAQLL+L++ DP+KDI +Y+NSPGGS+T+GM
Sbjct: 17 RSYDIFSRLLKDRIIMLSGEVNDVTANLVVAQLLFLESEDPDKDIHLYINSPGGSITSGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
AI+DT+++I+PDVST+C+G+AASMGAFLLS+G KGK
Sbjct: 77 AIYDTMQYIKPDVSTICIGMAASMGAFLLSSGAKGKRFAL 116
>sp|Q0TQK2|CLPP_CLOP1 ATP-dependent Clp protease proteolytic subunit OS=Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
GN=clpP PE=3 SV=1
Length = 194
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 81/100 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D AN++VAQLL+L++ DP+KDI +Y+NSPGGS+T+GM
Sbjct: 17 RSYDIFSRLLKDRIIMLSGEVNDVTANLVVAQLLFLESEDPDKDIHLYINSPGGSITSGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
AI+DT+++I+PDVST+C+G+AASMGAFLLS+G KGK
Sbjct: 77 AIYDTMQYIKPDVSTICIGMAASMGAFLLSSGAKGKRFAL 116
>sp|B7GL34|CLPP_ANOFW ATP-dependent Clp protease proteolytic subunit OS=Anoxybacillus
flavithermus (strain DSM 21510 / WK1) GN=clpP PE=3 SV=1
Length = 196
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 80/100 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +AN IV+QLL+L A DP KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIILGSPIDDHVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
AI+DT++ I+PDVST+C+G+AASMGAFLL+AG KGK
Sbjct: 76 AIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFAL 115
>sp|Q73I59|CLPP_WOLPM ATP-dependent Clp protease proteolytic subunit OS=Wolbachia
pipientis wMel GN=clpP PE=3 SV=1
Length = 208
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/96 (61%), Positives = 82/96 (85%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GP+ED+MA++IVAQLL+L++ +PNKDI MY+NSPGG VTAG+
Sbjct: 16 RAYDIYSRLVKERIIFVTGPIEDNMASVIVAQLLFLESENPNKDICMYINSPGGVVTAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGK 206
+I+DT+++I PDVST+C+G AASMG+ LL+AGTKGK
Sbjct: 76 SIYDTMQYINPDVSTLCIGQAASMGSLLLAAGTKGK 111
>sp|Q3Z4W6|CLPP_SHISS ATP-dependent Clp protease proteolytic subunit OS=Shigella sonnei
(strain Ss046) GN=clpP PE=3 SV=1
Length = 207
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 79/97 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
DT++ I+PDVST+C+G AASMGAFLL+AG KGK C
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128
>sp|P0A6H0|CLPP_SHIFL ATP-dependent Clp protease proteolytic subunit OS=Shigella flexneri
GN=clpP PE=3 SV=1
Length = 207
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 79/97 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
DT++ I+PDVST+C+G AASMGAFLL+AG KGK C
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128
>sp|Q0T7E6|CLPP_SHIF8 ATP-dependent Clp protease proteolytic subunit OS=Shigella flexneri
serotype 5b (strain 8401) GN=clpP PE=3 SV=1
Length = 207
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 79/97 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
DT++ I+PDVST+C+G AASMGAFLL+AG KGK C
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128
>sp|Q32JJ3|CLPP_SHIDS ATP-dependent Clp protease proteolytic subunit OS=Shigella
dysenteriae serotype 1 (strain Sd197) GN=clpP PE=3 SV=1
Length = 207
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 79/97 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
DT++ I+PDVST+C+G AASMGAFLL+AG KGK C
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128
>sp|Q325G4|CLPP_SHIBS ATP-dependent Clp protease proteolytic subunit OS=Shigella boydii
serotype 4 (strain Sb227) GN=clpP PE=3 SV=1
Length = 207
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 79/97 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
DT++ I+PDVST+C+G AASMGAFLL+AG KGK C
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128
>sp|Q1RF98|CLPP_ECOUT ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli
(strain UTI89 / UPEC) GN=clpP PE=3 SV=1
Length = 207
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 79/97 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
DT++ I+PDVST+C+G AASMGAFLL+AG KGK C
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128
>sp|P0A6G7|CLPP_ECOLI ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli
(strain K12) GN=clpP PE=1 SV=1
Length = 207
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 79/97 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
DT++ I+PDVST+C+G AASMGAFLL+AG KGK C
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128
>sp|B1J011|CLPP_ECOLC ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=clpP PE=3 SV=1
Length = 207
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 79/97 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
DT++ I+PDVST+C+G AASMGAFLL+AG KGK C
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128
>sp|P0A6G8|CLPP_ECOL6 ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=clpP PE=3
SV=1
Length = 207
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 79/97 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
DT++ I+PDVST+C+G AASMGAFLL+AG KGK C
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128
>sp|Q0TKK4|CLPP_ECOL5 ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=clpP PE=3 SV=1
Length = 207
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 79/97 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
DT++ I+PDVST+C+G AASMGAFLL+AG KGK C
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128
>sp|A1A8A6|CLPP_ECOK1 ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli
O1:K1 / APEC GN=clpP PE=3 SV=1
Length = 207
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 79/97 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKYLCF 210
DT++ I+PDVST+C+G AASMGAFLL+AG KGK C
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,713,432
Number of Sequences: 539616
Number of extensions: 3429935
Number of successful extensions: 7929
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 7151
Number of HSP's gapped (non-prelim): 768
length of query: 221
length of database: 191,569,459
effective HSP length: 113
effective length of query: 108
effective length of database: 130,592,851
effective search space: 14104027908
effective search space used: 14104027908
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)