BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027642
(220 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55129|Y400_SYNY3 Uncharacterized protein sll0400 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll0400 PE=3 SV=1
Length = 164
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%)
Query: 68 LILLRHAKSSWEFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L L+RH + + P + D DR L+K G+D +V+QRLQ +G LIL+S VR +QT
Sbjct: 3 LYLIRHGIAQEQSPDIPDGDRQLTKKGKDKTQRVAQRLQAIGVEFDLILTSPLVRAQQTA 62
Query: 128 EIM 130
+I+
Sbjct: 63 QIL 65
>sp|Q54751|Y2622_SYNP2 Uncharacterized protein SYNPCC7002_A2622 OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6)
GN=SYNPCC7002_A2622 PE=3 SV=1
Length = 165
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 68 LILLRHAKSSWEFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L RH ++ D DRPL+ G+ V+QRLQQLG + IL+S +R RQT
Sbjct: 3 LYFFRHGIAADRADYAEDGDRPLTTKGETRTKLVAQRLQQLGLHFEGILTSPLLRARQTA 62
Query: 128 EIM 130
EI+
Sbjct: 63 EIL 65
>sp|Q327K0|GPMB_SHIDS Probable phosphoglycerate mutase GpmB OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=gpmB PE=3 SV=1
Length = 215
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T+
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTV 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|Q1R246|GPMB_ECOUT Probable phosphoglycerate mutase GpmB OS=Escherichia coli (strain
UTI89 / UPEC) GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|Q8FA40|GPMB_ECOL6 Probable phosphoglycerate mutase GpmB OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|Q0T8R6|GPMB_ECOL5 Probable phosphoglycerate mutase GpmB OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|A1AJW4|GPMB_ECOK1 Probable phosphoglycerate mutase GpmB OS=Escherichia coli O1:K1 /
APEC GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|B7MTE3|GPMB_ECO81 Probable phosphoglycerate mutase GpmB OS=Escherichia coli O81
(strain ED1a) GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|B7NW76|GPMB_ECO7I Probable phosphoglycerate mutase GpmB OS=Escherichia coli O7:K1
(strain IAI39 / ExPEC) GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|B7MNK4|GPMB_ECO45 Probable phosphoglycerate mutase GpmB OS=Escherichia coli O45:K1
(strain S88 / ExPEC) GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|B7LNT7|GPMB_ESCF3 Probable phosphoglycerate mutase GpmB OS=Escherichia fergusonii
(strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=gpmB
PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|Q3YTZ9|GPMB_SHISS Probable phosphoglycerate mutase GpmB OS=Shigella sonnei (strain
Ss046) GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|P0A7A4|GPMB_SHIFL Probable phosphoglycerate mutase GpmB OS=Shigella flexneri GN=gpmB
PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|Q0SX17|GPMB_SHIF8 Probable phosphoglycerate mutase GpmB OS=Shigella flexneri serotype
5b (strain 8401) GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|B1LEK2|GPMB_ECOSM Probable phosphoglycerate mutase GpmB OS=Escherichia coli (strain
SMS-3-5 / SECEC) GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|B6I6P3|GPMB_ECOSE Probable phosphoglycerate mutase GpmB OS=Escherichia coli (strain
SE11) GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|B7NH70|GPMB_ECOLU Probable phosphoglycerate mutase GpmB OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|P0A7A2|GPMB_ECOLI Probable phosphoglycerate mutase GpmB OS=Escherichia coli (strain
K12) GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|B1IS24|GPMB_ECOLC Probable phosphoglycerate mutase GpmB OS=Escherichia coli (strain
ATCC 8739 / DSM 1576 / Crooks) GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|A8A8C4|GPMB_ECOHS Probable phosphoglycerate mutase GpmB OS=Escherichia coli O9:H4
(strain HS) GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|B1XFK5|GPMB_ECODH Probable phosphoglycerate mutase GpmB OS=Escherichia coli (strain
K12 / DH10B) GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|C4ZT77|GPMB_ECOBW Probable phosphoglycerate mutase GpmB OS=Escherichia coli (strain
K12 / MC4100 / BW2952) GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|B7LXV9|GPMB_ECO8A Probable phosphoglycerate mutase GpmB OS=Escherichia coli O8
(strain IAI1) GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|B5Z4S7|GPMB_ECO5E Probable phosphoglycerate mutase GpmB OS=Escherichia coli O157:H7
(strain EC4115 / EHEC) GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|P0A7A3|GPMB_ECO57 Probable phosphoglycerate mutase GpmB OS=Escherichia coli O157:H7
GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|B7LEP1|GPMB_ECO55 Probable phosphoglycerate mutase GpmB OS=Escherichia coli (strain
55989 / EAEC) GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|A7ZVT7|GPMB_ECO24 Probable phosphoglycerate mutase GpmB OS=Escherichia coli O139:H28
(strain E24377A / ETEC) GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|Q31SU3|GPMB_SHIBS Probable phosphoglycerate mutase GpmB OS=Shigella boydii serotype 4
(strain Sb227) GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|B2TZS8|GPMB_SHIB3 Probable phosphoglycerate mutase GpmB OS=Shigella boydii serotype
18 (strain CDC 3083-94 / BS512) GN=gpmB PE=3 SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V+ R ++LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITH--IISSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|Q11043|Y1276_MYCTU Uncharacterized protein Rv1276c/MT1313 OS=Mycobacterium
tuberculosis GN=Rv1276c PE=3 SV=1
Length = 158
Score = 38.1 bits (87), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 56/139 (40%), Gaps = 18/139 (12%)
Query: 71 LRHAKSSWEFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIM 130
+RHAKS++ + DHDRPL+ G +A L+ +L S A R RQTL
Sbjct: 1 MRHAKSAYP-DGIADHDRPLAPRGIREAGLAGGWLRANLPAVDAVLCSTATRARQTL--- 56
Query: 131 QQHVQGFLEAEVHFISSFYSVAAMDGQTAEHLQKAICKYSRDEILTVMCMGHNRGWEEAA 190
++A + Y A G E + + D + T++ +GH E
Sbjct: 57 ---AHTGIDAPARYAERLYGAA--PGTVIEEINRV-----GDNVTTLLVVGH----EPTT 102
Query: 191 SMFTGAFIELKTCNAALLE 209
S + +AA+ E
Sbjct: 103 SALAIVLASISGTDAAVAE 121
>sp|B2S101|GPMA_BORHD 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Borrelia hermsii (strain DAH) GN=gpmA PE=3 SV=1
Length = 248
Score = 37.7 bits (86), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 14/116 (12%)
Query: 67 RLILLRHAKSSWEFPSLRD--HDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTR 124
+L+L+RH +S W +L D LS+ G +A++ + L+Q G+ + SS VR
Sbjct: 3 KLVLVRHGESEWNRENLFTGWTDVKLSEKGISEALEGGRVLKQNGYSFDIAFSSMLVRAN 62
Query: 125 QTLEIMQQHV-QGFLEAEVHFISSFYSVAAMDG----QTAEHLQKAICKYSRDEIL 175
TL I+ + + Q +++ E + + A+ G +TAE KY D++L
Sbjct: 63 DTLNIILRELGQSYIDVEKSWRLNERHYGALQGLNKAETAE-------KYGEDQVL 111
>sp|A1R083|GPMA_BORT9 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Borrelia turicatae (strain 91E135) GN=gpmA PE=3 SV=1
Length = 248
Score = 37.7 bits (86), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 14/116 (12%)
Query: 67 RLILLRHAKSSWEFPSLRD--HDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTR 124
+L+L+RH +S W +L D LS+ G +A++ + L+Q G+ + SS VR
Sbjct: 3 KLVLVRHGESEWNKENLFTGWTDVKLSEKGISEALEGGRVLKQEGYSFDIAFSSVLVRAN 62
Query: 125 QTLEIMQQHV-QGFLEAEVHFISSFYSVAAMDG----QTAEHLQKAICKYSRDEIL 175
TL I+ + + Q +++ E + + A+ G +TAE KY D++L
Sbjct: 63 DTLNIILRELGQSYIDVEKSWRLNERHYGALQGLNKAETAE-------KYGEDKVL 111
>sp|A8ALW1|GPMB_CITK8 Probable phosphoglycerate mutase GpmB OS=Citrobacter koseri (strain
ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=gpmB PE=3 SV=1
Length = 215
Score = 37.7 bits (86), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V +R + LG I+SSD RTR+T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGERARTLGITH--IVSSDLGRTRRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|Q0SMJ5|GPMA_BORAP 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Borrelia afzelii (strain PKo) GN=gpmA PE=3 SV=1
Length = 248
Score = 37.0 bits (84), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 67 RLILLRHAKSSWEFPSLRD--HDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTR 124
+L+L+RH +S W +L D LS G D+AI+ L+Q G+ + SS R
Sbjct: 3 KLVLVRHGESEWNKENLFTGWTDVKLSDKGVDEAIEAGLLLKQEGYFFDIAFSSLLSRAN 62
Query: 125 QTLEIMQQHV-QGFLEAEVHFISSFYSVAAMDGQTAEHLQKAICKYSRDEIL 175
TL I+ + + Q ++ + + + A+ G + KY D++L
Sbjct: 63 DTLNIILKELGQSYISVKKTWRLNERHYGALQGLNK---SETAAKYGEDKVL 111
>sp|C0Q8F5|GPMB_SALPC Probable phosphoglycerate mutase GpmB OS=Salmonella paratyphi C
(strain RKS4594) GN=gpmB PE=3 SV=1
Length = 215
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V +R + LG I+SSD RT++T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGERARSLG--STHIISSDLGRTKRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|A7MIJ0|GPMB_CROS8 Probable phosphoglycerate mutase GpmB OS=Cronobacter sakazakii
(strain ATCC BAA-894) GN=gpmB PE=3 SV=1
Length = 215
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL++ G+ A++V+QR + LG I++SD RT++T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTEKGERQAMQVAQRAKALGITH--IITSDLGRTQRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|B5BAL1|GPMB_SALPK Probable phosphoglycerate mutase GpmB OS=Salmonella paratyphi A
(strain AKU_12601) GN=gpmB PE=3 SV=1
Length = 215
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V +R + LG I+SSD RT++T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGERARSLGITH--IISSDLGRTKRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|Q8ZJU8|GPMB_SALTY Probable phosphoglycerate mutase GpmB OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=gpmB PE=3 SV=1
Length = 215
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V +R + LG I+SSD RT++T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGERARSLGITH--IISSDLGRTKRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|Q8Z0T4|GPMB_SALTI Probable phosphoglycerate mutase GpmB OS=Salmonella typhi GN=gpmB
PE=3 SV=1
Length = 215
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V +R + LG I+SSD RT++T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGERARSLGITH--IISSDLGRTKRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|B4TU55|GPMB_SALSV Probable phosphoglycerate mutase GpmB OS=Salmonella schwarzengrund
(strain CVM19633) GN=gpmB PE=3 SV=1
Length = 215
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V +R + LG I+SSD RT++T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGERARSLGITH--IISSDLGRTKRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|A9N7F5|GPMB_SALPB Probable phosphoglycerate mutase GpmB OS=Salmonella paratyphi B
(strain ATCC BAA-1250 / SPB7) GN=gpmB PE=3 SV=1
Length = 215
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V +R + LG I+SSD RT++T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGERARSLGITH--IISSDLGRTKRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|Q5PK44|GPMB_SALPA Probable phosphoglycerate mutase GpmB OS=Salmonella paratyphi A
(strain ATCC 9150 / SARB42) GN=gpmB PE=3 SV=1
Length = 215
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V +R + LG I+SSD RT++T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGERARSLGITH--IISSDLGRTKRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|B4T4I9|GPMB_SALNS Probable phosphoglycerate mutase GpmB OS=Salmonella newport (strain
SL254) GN=gpmB PE=3 SV=1
Length = 215
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V +R + LG I+SSD RT++T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGERARSLGITH--IISSDLGRTKRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|B4TH18|GPMB_SALHS Probable phosphoglycerate mutase GpmB OS=Salmonella heidelberg
(strain SL476) GN=gpmB PE=3 SV=1
Length = 215
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V +R + LG I+SSD RT++T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGERARSLGITH--IISSDLGRTKRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|B5R9W3|GPMB_SALG2 Probable phosphoglycerate mutase GpmB OS=Salmonella gallinarum
(strain 287/91 / NCTC 13346) GN=gpmB PE=3 SV=1
Length = 215
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V +R + LG I+SSD RT++T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGERARSLGITH--IISSDLGRTKRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|B5R3B7|GPMB_SALEP Probable phosphoglycerate mutase GpmB OS=Salmonella enteritidis PT4
(strain P125109) GN=gpmB PE=3 SV=1
Length = 215
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V +R + LG I+SSD RT++T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGERARSLGITH--IISSDLGRTKRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|B5FTD9|GPMB_SALDC Probable phosphoglycerate mutase GpmB OS=Salmonella dublin (strain
CT_02021853) GN=gpmB PE=3 SV=1
Length = 215
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V +R + LG I+SSD RT++T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGERARSLGITH--IISSDLGRTKRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|B5F543|GPMB_SALA4 Probable phosphoglycerate mutase GpmB OS=Salmonella agona (strain
SL483) GN=gpmB PE=3 SV=1
Length = 215
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V +R + LG I+SSD RT++T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGERARSLGITH--IISSDLGRTKRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|A9MR94|GPMB_SALAR Probable phosphoglycerate mutase GpmB OS=Salmonella arizonae
(strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=gpmB PE=3
SV=1
Length = 215
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 70 LLRHAKSSW--EFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
L+RH ++ W E D PL+ G+ A++V +R + LG I+SSD RT++T
Sbjct: 6 LVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGERARSLGITH--IISSDLGRTKRTA 63
Query: 128 EIMQQ 132
EI+ Q
Sbjct: 64 EIIAQ 68
>sp|Q07UT3|GPMA_RHOP5 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Rhodopseudomonas palustris (strain BisA53) GN=gpmA
PE=3 SV=1
Length = 207
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 66 RRLILLRHAKSSWEFPSL----RDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAV 121
R L+L+RH +S W +L +D D L++ G +A Q+L+ G++ + +S
Sbjct: 4 RLLVLVRHGQSDWNLKNLFTGWKDPD--LTEQGVAEAKAAGQKLKTQGFVFDVAFTSALT 61
Query: 122 RTRQTLEIM 130
R + TL++M
Sbjct: 62 RAQHTLDLM 70
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.129 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,784,145
Number of Sequences: 539616
Number of extensions: 2672865
Number of successful extensions: 6757
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 182
Number of HSP's that attempted gapping in prelim test: 6711
Number of HSP's gapped (non-prelim): 188
length of query: 220
length of database: 191,569,459
effective HSP length: 113
effective length of query: 107
effective length of database: 130,592,851
effective search space: 13973435057
effective search space used: 13973435057
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)