Query 027644
Match_columns 220
No_of_seqs 130 out of 362
Neff 3.9
Searched_HMMs 13730
Date Mon Mar 25 22:13:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027644.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027644hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1zy3a1 f.1.4.1 (A:1-170) Apop 25.6 70 0.0051 23.9 6.1 89 89-199 75-169 (170)
2 d1zfda_ g.37.1.1 (A:) SWI5 zin 17.4 16 0.0012 21.0 0.5 8 210-217 1-8 (32)
3 d1a1ia2 g.37.1.1 (A:132-159) Z 15.5 18 0.0013 20.1 0.3 9 210-218 1-9 (28)
4 d1qled_ f.23.8.1 (D:) Bacteria 13.1 1.4E+02 0.01 18.2 4.2 18 95-112 12-29 (43)
5 d1m56d_ f.23.8.1 (D:) Bacteria 11.6 1.6E+02 0.012 17.8 4.7 18 95-112 11-28 (42)
6 d1oedc_ f.36.1.1 (C:) Acetylch 11.3 1.2E+02 0.0088 22.4 4.2 24 108-131 231-254 (260)
7 d2dmda3 g.37.1.1 (A:62-90) Zin 11.2 35 0.0025 19.4 0.7 10 210-219 1-10 (29)
8 d1p7aa_ g.37.1.1 (A:) Kruppel- 9.7 48 0.0035 18.9 1.0 12 208-219 7-18 (37)
9 d1srka_ g.37.1.1 (A:) Zinc fin 9.1 39 0.0028 19.5 0.4 10 209-218 4-13 (35)
10 d1ptma_ c.77.1.3 (A:) 4-hydrox 8.6 1.3E+02 0.0096 24.3 3.8 20 64-83 288-307 (329)
No 1
>d1zy3a1 f.1.4.1 (A:1-170) Apoptosis regulator Bcl-w {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.58 E-value=70 Score=23.90 Aligned_cols=89 Identities=13% Similarity=0.048 Sum_probs=56.5
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccchhHHHHHHHHHHHHHHHH
Q 027644 89 PLGFFRSIESNIERLIFDFRFLALLAVGGSLAGSLLCFLNGCIYIVDAYKVYWTSCVKGVHTGKMVLRLVEAIDVYLAGT 168 (220)
Q Consensus 89 ~~~~~~~iE~~fEriLf~SRwLvLlpV~~sLlgSllLFi~G~vel~~~~~~v~~~~~~~~~~~~LIl~vLelIDlfLIA~ 168 (220)
-..+.+.++++|+..+-..|-+.++++.+.|..= ... ....+.+-.+++-+=.||--.
T Consensus 75 ~~~f~~Va~elF~dginWGRIVal~~F~g~la~~-----------------~~~-----~~~~~~v~~i~~~~~~fl~~~ 132 (170)
T d1zy3a1 75 QQRFTQVSDELFQGGPNWGRLVAFFVFGAALCAE-----------------SVN-----KEMEVLVGQVQEWMVAYLETR 132 (170)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH-----------------HHH-----TTCHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH-----------------HHH-----cCCchHHHHHHHHHHHHHHHh
Confidence 3445567788888888888888765555443211 111 112355666666666666655
Q ss_pred -HHHHHhhhcchhccccCCCCCCCCc-----cccccc
Q 027644 169 -VMLIFGMGLYGLFISNVPPNVAPNV-----DRALKG 199 (220)
Q Consensus 169 -VLLIfs~GLYELFISkid~~~~~~~-----p~wL~i 199 (220)
.=.|--=||++-|+...+.+..++. ..|+.+
T Consensus 133 l~~WI~~~GGW~gf~~~f~~~~~~~~~~~~~~~W~~~ 169 (170)
T d1zy3a1 133 LADWIHSSGGWAEFTALYGDGALEEARRLREGNWASV 169 (170)
T ss_dssp SHHHHHHHTTTHHHHHHSSCSSCCCSSCCCCTTSCCC
T ss_pred HHHHHHHcCCHHHHHHHHcccchhhhcccccccchhc
Confidence 4478999999999998876543332 467765
No 2
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=17.43 E-value=16 Score=20.95 Aligned_cols=8 Identities=13% Similarity=0.360 Sum_probs=6.7
Q ss_pred cccccccC
Q 027644 210 LSQLHCSN 217 (220)
Q Consensus 210 er~~~~~~ 217 (220)
|||++|.-
T Consensus 1 ErP~~C~~ 8 (32)
T d1zfda_ 1 DRPYSCDH 8 (32)
T ss_dssp CCSBCCCC
T ss_pred CcCeECcC
Confidence 89999963
No 3
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=15.49 E-value=18 Score=20.11 Aligned_cols=9 Identities=11% Similarity=0.316 Sum_probs=7.5
Q ss_pred cccccccCC
Q 027644 210 LSQLHCSNL 218 (220)
Q Consensus 210 er~~~~~~~ 218 (220)
|||+.|+-.
T Consensus 1 EKPy~C~~C 9 (28)
T d1a1ia2 1 QKPFQCRIC 9 (28)
T ss_dssp CCCEECTTT
T ss_pred CcCccCCCC
Confidence 899999864
No 4
>d1qled_ f.23.8.1 (D:) Bacterial aa3 type cytochrome c oxidase subunit IV {Paracoccus denitrificans [TaxId: 266]}
Probab=13.07 E-value=1.4e+02 Score=18.17 Aligned_cols=18 Identities=6% Similarity=0.202 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 027644 95 SIESNIERLIFDFRFLAL 112 (220)
Q Consensus 95 ~iE~~fEriLf~SRwLvL 112 (220)
.=|+-|+.++...-|..+
T Consensus 12 vQEkTF~gFi~~~t~~~i 29 (43)
T d1qled_ 12 HQQATFAGFIKGATWVSI 29 (43)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 458889999977777763
No 5
>d1m56d_ f.23.8.1 (D:) Bacterial aa3 type cytochrome c oxidase subunit IV {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=11.56 E-value=1.6e+02 Score=17.78 Aligned_cols=18 Identities=11% Similarity=0.148 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 027644 95 SIESNIERLIFDFRFLAL 112 (220)
Q Consensus 95 ~iE~~fEriLf~SRwLvL 112 (220)
.=|+-|+.++...-|..+
T Consensus 11 vQEKTF~gFik~~t~~~i 28 (42)
T d1m56d_ 11 QQEKTFAGFVRMVTWAAV 28 (42)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 358889999977777753
No 6
>d1oedc_ f.36.1.1 (C:) Acetylcholine receptor protein, delta chain {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}
Probab=11.25 E-value=1.2e+02 Score=22.42 Aligned_cols=24 Identities=17% Similarity=0.368 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 027644 108 RFLALLAVGGSLAGSLLCFLNGCI 131 (220)
Q Consensus 108 RwLvLlpV~~sLlgSllLFi~G~v 131 (220)
|.+.++-++..+++++.+|+++..
T Consensus 231 Rlfl~lF~i~~vi~ti~ifl~~~~ 254 (260)
T d1oedc_ 231 RLSMFIITPVMVLGTIFIFVMGNF 254 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhc
Confidence 444444555556677777776644
No 7
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.21 E-value=35 Score=19.37 Aligned_cols=10 Identities=20% Similarity=0.481 Sum_probs=7.5
Q ss_pred cccccccCCC
Q 027644 210 LSQLHCSNLP 219 (220)
Q Consensus 210 er~~~~~~~~ 219 (220)
|||++|--.+
T Consensus 1 erpfkcqlcs 10 (29)
T d2dmda3 1 ERPFKCQICP 10 (29)
T ss_dssp CCCEECSSSS
T ss_pred CCcceeeecc
Confidence 7999996543
No 8
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}
Probab=9.69 E-value=48 Score=18.93 Aligned_cols=12 Identities=8% Similarity=0.429 Sum_probs=8.9
Q ss_pred cccccccccCCC
Q 027644 208 LKLSQLHCSNLP 219 (220)
Q Consensus 208 lker~~~~~~~~ 219 (220)
-.|||+.|....
T Consensus 7 TgeKPy~C~~C~ 18 (37)
T d1p7aa_ 7 TGIKPFQCPDCD 18 (37)
T ss_dssp CCSSSBCCTTTC
T ss_pred CCccCeEeCCCC
Confidence 368999997543
No 9
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=9.08 E-value=39 Score=19.50 Aligned_cols=10 Identities=10% Similarity=0.115 Sum_probs=7.6
Q ss_pred ccccccccCC
Q 027644 209 KLSQLHCSNL 218 (220)
Q Consensus 209 ker~~~~~~~ 218 (220)
-|||+.|.-.
T Consensus 4 GekPy~C~~C 13 (35)
T d1srka_ 4 GKRPFVCRIC 13 (35)
T ss_dssp CCSCEECSSS
T ss_pred CCccccCCCC
Confidence 3899999753
No 10
>d1ptma_ c.77.1.3 (A:) 4-hydroxythreonine-4-phosphate dehydrogenase PdxA {Escherichia coli [TaxId: 562]}
Probab=8.60 E-value=1.3e+02 Score=24.26 Aligned_cols=20 Identities=25% Similarity=0.436 Sum_probs=17.8
Q ss_pred CCcccccCCCCCCCcccccC
Q 027644 64 KPFAESSRQHDPSFNYARAN 83 (220)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~ 83 (220)
-|++-.|-.|+.+||.|-.|
T Consensus 288 Lp~irtSpdHGTA~dIagk~ 307 (329)
T d1ptma_ 288 LPFIRTSVDHGTALELAGRG 307 (329)
T ss_dssp SSSEEEECSSCCCGGGTTSS
T ss_pred CCceEeCCCCCchhhhcCCC
Confidence 48999999999999998775
Done!