BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>027649
MAISGDLRVAATLASYHQHPLRSSLPSSKVDFAGFPSEITPKWPGMAIDNCSMRQSKLFS
RISGDYKLSPNPISHEVESFLLNAINMSFFDRLNLAWKIVFPSPTTRRNSNARIAKQRLQ
MILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDTDLGTIYSVTVPVRR
VKPEYLDSYDVGTIANVEYKDTGETSGSVDVRFDFFVPDE

High Scoring Gene Products

Symbol, full name Information P value
MINE1
AT1G69390
protein from Arabidopsis thaliana 5.9e-73
minE
Cell division topological specificity factor
protein from Carboxydothermus hydrogenoformans Z-2901 0.00029
CHY_0349
cell division topological specificity factor MinE
protein from Carboxydothermus hydrogenoformans Z-2901 0.00029

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  027649
        (220 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2007171 - symbol:MINE1 "homologue of bacterial...   737  5.9e-73   1
UNIPROTKB|Q3AF72 - symbol:minE "Cell division topological...    93  0.00029   1
TIGR_CMR|CHY_0349 - symbol:CHY_0349 "cell division topolo...    93  0.00029   1


>TAIR|locus:2007171 [details] [associations]
            symbol:MINE1 "homologue of bacterial MinE 1" species:3702
            "Arabidopsis thaliana" [GO:0032955 "regulation of barrier septum
            assembly" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=IDA] [GO:0010020 "chloroplast
            fission" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0051117 "ATPase binding" evidence=IPI] [GO:0042802 "identical
            protein binding" evidence=IPI] [GO:0009706 "chloroplast inner
            membrane" evidence=IDA] InterPro:IPR005527 Pfam:PF03776
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0051301
            EMBL:AC018364 EMBL:AC073178 GO:GO:0010020 GO:GO:0032955
            EMBL:AB046117 EMBL:BT002897 EMBL:BT004467 EMBL:AY088828
            IPI:IPI00532793 RefSeq:NP_564964.1 UniGene:At.27512
            ProteinModelPortal:Q9C4Z7 SMR:Q9C4Z7 IntAct:Q9C4Z7
            MINT:MINT-4507043 STRING:Q9C4Z7 PaxDb:Q9C4Z7 PRIDE:Q9C4Z7
            EnsemblPlants:AT1G69390.1 GeneID:843271 KEGG:ath:AT1G69390
            TAIR:At1g69390 eggNOG:NOG329658 HOGENOM:HOG000006027
            InParanoid:Q9C4Z7 OMA:PEYQESE PhylomeDB:Q9C4Z7
            ProtClustDB:CLSN2689103 Genevestigator:Q9C4Z7 Uniprot:Q9C4Z7
        Length = 229

 Score = 737 (264.5 bits), Expect = 5.9e-73, P = 5.9e-73
 Identities = 160/231 (69%), Positives = 183/231 (79%)

Query:     1 MAIS-GDLRVAATLAS--YHQHPLRSSLPSS--KVDFAGFPSE-----ITPKW-PGMAID 49
             MA+S G LR++ATL S  +H H  R SLPSS  KVDF GF S       T K  PG+AI 
Sbjct:     1 MAMSSGTLRISATLVSPYHHHHRNRLSLPSSSSKVDFTGFISNGVNSLETQKCTPGLAIS 60

Query:    50 NCSMR-QSKLFSRISGDYKLSPNPISHEVESFLLNAINMSFFDRLNLAWKIVFPSPTTRR 108
               + R Q K+ +R +GDY+LSP+P   E+ESFL NAINM FFDRLNLAWKI+FPS  +RR
Sbjct:    61 RENTRGQVKVLARNTGDYELSPSPAEQEIESFLYNAINMGFFDRLNLAWKIIFPSHASRR 120

Query:   109 NSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDTDL 168
             +SNARIAKQRL+MILFSDRC VSDEAKRKIVNNI+HALSDFVEIES++KVQLNVSTD DL
Sbjct:   121 SSNARIAKQRLKMILFSDRCDVSDEAKRKIVNNIIHALSDFVEIESEEKVQLNVSTDGDL 180

Query:   169 GTIYSVTVPVRRVKPEYLDSYDVGTIANVEYKDTGETSGSVDVRFDFFVPD 219
             GTIYSVTVPVRRVKPEY D  + GTI NVEYKDT +  GSVDVRFDF+VP+
Sbjct:   181 GTIYSVTVPVRRVKPEYQDVDEAGTITNVEYKDTRD--GSVDVRFDFYVPE 229


>UNIPROTKB|Q3AF72 [details] [associations]
            symbol:minE "Cell division topological specificity factor"
            species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0003674 "molecular_function" evidence=ND] InterPro:IPR005527
            Pfam:PF03776 GO:GO:0051301 EMBL:CP000141 GenomeReviews:CP000141_GR
            GO:GO:0007049 GO:GO:0032955 RefSeq:YP_359212.1
            ProteinModelPortal:Q3AF72 STRING:Q3AF72 GeneID:3726970
            KEGG:chy:CHY_0349 PATRIC:21273861 eggNOG:COG0851
            HOGENOM:HOG000218363 KO:K03608 OMA:QMRREIL
            BioCyc:CHYD246194:GJCN-350-MONOMER HAMAP:MF_00262
            TIGRFAMs:TIGR01215 Uniprot:Q3AF72
        Length = 88

 Score = 93 (37.8 bits), Expect = 0.00029, P = 0.00029
 Identities = 19/76 (25%), Positives = 47/76 (61%)

Query:   107 RRNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDT 166
             ++NS   +AK+RL+++L  DR  VS E  + +  +++  ++ ++EI+ +  +++N+ +  
Sbjct:     8 QQNSKT-MAKERLRLVLVQDRTNVSPELLQNLKEDLIAVITKYMEIDEK-ALEVNIDSHE 65

Query:   167 DLGTIYSVTVPVRRVK 182
             D   + +  +P++ VK
Sbjct:    66 DQVALIA-NIPIKNVK 80


>TIGR_CMR|CHY_0349 [details] [associations]
            symbol:CHY_0349 "cell division topological specificity
            factor MinE" species:246194 "Carboxydothermus hydrogenoformans
            Z-2901" [GO:0000910 "cytokinesis" evidence=ISS] [GO:0000918
            "barrier septum site selection" evidence=ISS] [GO:0003674
            "molecular_function" evidence=ND] InterPro:IPR005527 Pfam:PF03776
            GO:GO:0051301 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0007049
            GO:GO:0032955 RefSeq:YP_359212.1 ProteinModelPortal:Q3AF72
            STRING:Q3AF72 GeneID:3726970 KEGG:chy:CHY_0349 PATRIC:21273861
            eggNOG:COG0851 HOGENOM:HOG000218363 KO:K03608 OMA:QMRREIL
            BioCyc:CHYD246194:GJCN-350-MONOMER HAMAP:MF_00262
            TIGRFAMs:TIGR01215 Uniprot:Q3AF72
        Length = 88

 Score = 93 (37.8 bits), Expect = 0.00029, P = 0.00029
 Identities = 19/76 (25%), Positives = 47/76 (61%)

Query:   107 RRNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDT 166
             ++NS   +AK+RL+++L  DR  VS E  + +  +++  ++ ++EI+ +  +++N+ +  
Sbjct:     8 QQNSKT-MAKERLRLVLVQDRTNVSPELLQNLKEDLIAVITKYMEIDEK-ALEVNIDSHE 65

Query:   167 DLGTIYSVTVPVRRVK 182
             D   + +  +P++ VK
Sbjct:    66 DQVALIA-NIPIKNVK 80


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.133   0.383    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      220       220   0.00094  112 3  11 22  0.38    33
                                                     32  0.40    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  598 (64 KB)
  Total size of DFA:  164 KB (2097 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.13u 0.11s 19.24t   Elapsed:  00:00:01
  Total cpu time:  19.13u 0.11s 19.24t   Elapsed:  00:00:01
  Start:  Sat May 11 02:40:01 2013   End:  Sat May 11 02:40:02 2013

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