BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027649
(220 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C4Z7|MINE1_ARATH Cell division topological specificity factor homolog, chloroplastic
OS=Arabidopsis thaliana GN=MINE1 PE=1 SV=1
Length = 229
Score = 298 bits (762), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 157/227 (69%), Positives = 179/227 (78%), Gaps = 13/227 (5%)
Query: 4 SGDLRVAATLAS--YHQHPLRSSLPSS--KVDFAGFPS------EITPKWPGMAIDNCSM 53
SG LR++ATL S +H H R SLPSS KVDF GF S E PG+AI +
Sbjct: 5 SGTLRISATLVSPYHHHHRNRLSLPSSSSKVDFTGFISNGVNSLETQKCTPGLAISRENT 64
Query: 54 R-QSKLFSRISGDYKLSPNPISHEVESFLLNAINMSFFDRLNLAWKIVFPSPTTRRNSNA 112
R Q K+ +R +GDY+LSP+P E+ESFL NAINM FFDRLNLAWKI+FPS +RR+SNA
Sbjct: 65 RGQVKVLARNTGDYELSPSPAEQEIESFLYNAINMGFFDRLNLAWKIIFPSHASRRSSNA 124
Query: 113 RIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDTDLGTIY 172
RIAKQRL+MILFSDRC VSDEAKRKIVNNI+HALSDFVEIES++KVQLNVSTD DLGTIY
Sbjct: 125 RIAKQRLKMILFSDRCDVSDEAKRKIVNNIIHALSDFVEIESEEKVQLNVSTDGDLGTIY 184
Query: 173 SVTVPVRRVKPEYLDSYDVGTIANVEYKDTGETSGSVDVRFDFFVPD 219
SVTVPVRRVKPEY D + GTI NVEYKDT + GSVDVRFDF+VP+
Sbjct: 185 SVTVPVRRVKPEYQDVDEAGTITNVEYKDTRD--GSVDVRFDFYVPE 229
>sp|Q5N4D6|MINE_SYNP6 Cell division topological specificity factor OS=Synechococcus sp.
(strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=minE
PE=3 SV=1
Length = 91
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 13/95 (13%)
Query: 89 FFDRLNLAWKIVFPSPTTRRNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSD 148
F+RL FP R++ KQRL+++L DR +S E +K+ I+ +S
Sbjct: 5 LFERL-------FPRQQASRDT----VKQRLKLVLAHDRADLSPELLQKMRQEILEVVSR 53
Query: 149 FVEIESQDKVQLNVSTDTDLGTIYSVTVPVRRVKP 183
+VE++S+ ++L++ D + + + +P+RRVKP
Sbjct: 54 YVELDSEG-MELSLENDQRVTALVA-NLPIRRVKP 86
>sp|Q31PU2|MINE_SYNE7 Cell division topological specificity factor OS=Synechococcus
elongatus (strain PCC 7942) GN=minE PE=3 SV=1
Length = 91
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 13/95 (13%)
Query: 89 FFDRLNLAWKIVFPSPTTRRNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSD 148
F+RL FP R++ KQRL+++L DR +S E +K+ I+ +S
Sbjct: 5 LFERL-------FPRQQASRDT----VKQRLKLVLAHDRADLSPELLQKMRQEILEVVSR 53
Query: 149 FVEIESQDKVQLNVSTDTDLGTIYSVTVPVRRVKP 183
+VE++S+ ++L++ D + + + +P+RRVKP
Sbjct: 54 YVELDSEG-MELSLENDQRVTALVA-NLPIRRVKP 86
>sp|A4J7J9|MINE_DESRM Cell division topological specificity factor OS=Desulfotomaculum
reducens (strain MI-1) GN=minE PE=3 SV=1
Length = 92
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 110 SNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDTDLG 169
S+ +AK+RL+++L DR VS E + N+++ +S+++EI+ + L VS D D
Sbjct: 15 SSKNVAKERLRLVLVHDRANVSPELLTSLKNDLIKVISNYMEIDDK---ALEVSLDGDDN 71
Query: 170 TIYSVT-VPVRRVK 182
+ V +PV+R+K
Sbjct: 72 QVALVANIPVKRLK 85
>sp|Q2JPH1|MINE_SYNJB Cell division topological specificity factor OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=minE PE=3 SV=1
Length = 100
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 106 TRRNSNARI-AKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVST 164
+R + N+R AKQRL++IL DR ++ A + I+ +S +VE++S+ +Q +++T
Sbjct: 11 SRHSGNSRQQAKQRLKLILAHDRADLTPAALESMRLEILGVVSRYVELDSEG-MQFHLAT 69
Query: 165 DTDLGTIYSVTVPVRRVKP 183
+ T +P+RRVKP
Sbjct: 70 EGGT-TALIANLPIRRVKP 87
>sp|Q3M7F0|MINE_ANAVT Cell division topological specificity factor OS=Anabaena variabilis
(strain ATCC 29413 / PCC 7937) GN=minE PE=3 SV=1
Length = 97
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 93 LNLAWKIVFPSPTTRRNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEI 152
L L K+ +P T R+ K+RLQ+++ DR + E K+ I+ + +VE+
Sbjct: 3 LELLDKLFLRTPDTSRSH----VKRRLQLVIAHDRAGLDPETLEKMRKEILDIVCRYVEV 58
Query: 153 ESQDKVQLNVSTDTDLGTIYSVTVPVRRVKPEYLDSYD 190
ES D ++ + ++ T +P+RRVKPE L ++D
Sbjct: 59 ES-DGLEFALESNQR-TTALIANLPIRRVKPE-LPAFD 93
>sp|Q7NJ38|MINE_GLOVI Cell division topological specificity factor OS=Gloeobacter
violaceus (strain PCC 7421) GN=minE PE=3 SV=1
Length = 91
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 108 RNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDTD 167
+ +A +AK RL+M+L DR ++ + +I I+ + + EI+ +K +V+ + +
Sbjct: 14 KTGSATVAKDRLKMVLAVDRTEIAPQTIEQIRKEILDVIVRYFEIDENEK--FDVTLERE 71
Query: 168 LG-TIYSVTVPVRRVKPEYL 186
G T VP+RR++PE++
Sbjct: 72 RGSTAIIANVPIRRIRPEHI 91
>sp|Q2JV04|MINE_SYNJA Cell division topological specificity factor OS=Synechococcus sp.
(strain JA-3-3Ab) GN=minE PE=3 SV=1
Length = 120
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 106 TRRNSNAR-IAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVST 164
+R + N+R AKQRL++IL DR ++ A + I+ +S +VE++S+ +Q +++
Sbjct: 11 SRHSGNSREQAKQRLKLILAHDRADLTPAALEAMRLEILGVVSRYVELDSEG-MQFHLAA 69
Query: 165 DTDLGTIYSVTVPVRRVKP 183
+ T +P+RRVKP
Sbjct: 70 EGGT-TALIANLPIRRVKP 87
>sp|A5N6J2|MINE_CLOK5 Cell division topological specificity factor OS=Clostridium
kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)
GN=minE PE=3 SV=1
Length = 88
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 110 SNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIE-SQDKVQLNVSTDTDL 168
S+ IAK+RL++IL +DRC++ E I +I+ LS ++EI ++ V++ ++ +
Sbjct: 11 SSKDIAKERLRLILINDRCSMPQEVLEDIKEDILKVLSKYMEINYAEIDVRMTITEKVEE 70
Query: 169 GTIYSVT-VPVRRVK 182
+ V +PV++VK
Sbjct: 71 DPVALVANIPVKKVK 85
>sp|Q8XII2|MINE_CLOPE Cell division topological specificity factor OS=Clostridium
perfringens (strain 13 / Type A) GN=minE PE=3 SV=1
Length = 90
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 108 RNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQD 156
R + ++AK RL++IL DR +SDE KI I+ LS +VEIE++D
Sbjct: 10 RPTPKQVAKDRLKVILIHDRGELSDEVLDKIRLEILDVLSKYVEIENED 58
>sp|Q0TNH5|MINE_CLOP1 Cell division topological specificity factor OS=Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
GN=minE PE=3 SV=1
Length = 90
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 108 RNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQD 156
R + ++AK RL++IL DR +SDE KI I+ LS +VEIE++D
Sbjct: 10 RPTPKQVAKDRLKVILIHDRGELSDEVLDKIRLEILDVLSKYVEIENED 58
>sp|Q0SR44|MINE_CLOPS Cell division topological specificity factor OS=Clostridium
perfringens (strain SM101 / Type A) GN=minE PE=3 SV=1
Length = 90
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 108 RNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQD 156
R + ++AK RL++IL DR +SDE KI I+ LS +VEIE++D
Sbjct: 10 RPTPKQVAKDRLKVILIHDRGELSDEVLDKIRLEILDVLSKYVEIENED 58
>sp|Q2RL16|MINE_MOOTA Cell division topological specificity factor OS=Moorella
thermoacetica (strain ATCC 39073) GN=minE PE=3 SV=1
Length = 98
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 110 SNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDTDLG 169
S+ ++AK+RL+++L DR VS + N+++ +S++++I++ D ++++++ + D
Sbjct: 15 SSKKVAKERLRLVLVHDRAGVSPHLLESLKNDLIKVISEYLDIDT-DGLEVSLTHENDAV 73
Query: 170 TIYSVTVPVRRVKPEY 185
+ + +P+ RVK +
Sbjct: 74 ALVA-NIPILRVKRTF 88
>sp|Q8YRI9|MINE_NOSS1 Cell division topological specificity factor OS=Nostoc sp. (strain
PCC 7120 / UTEX 2576) GN=minE PE=3 SV=1
Length = 97
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 93 LNLAWKIVFPSPTTRRNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEI 152
L L K+ +P T R+ K+RLQ+++ DR + E K+ I+ + +VE+
Sbjct: 3 LELLDKLFLRTPDTSRSH----VKRRLQLVIAHDRAGLDPETLEKMRKEILDIVCRYVEV 58
Query: 153 ESQDKVQLNVSTDTDLGTIYSVTVPVRRVKPE 184
E D ++ + ++ T +P+RRVKPE
Sbjct: 59 EP-DGLEFALESNQR-TTALIANLPIRRVKPE 88
>sp|C4Z090|MINE_EUBE2 Cell division topological specificity factor OS=Eubacterium eligens
(strain ATCC 27750 / VPI C15-48) GN=minE PE=3 SV=1
Length = 91
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Query: 107 RRNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVS--- 163
++ ++ +AK RL+++L SDR S E I N+I+ +S ++EI++ D + + ++
Sbjct: 8 KKKGSSDVAKDRLKLLLVSDRANCSPEVMEMIKNDIIKVISKYMEIDT-DGLDIQITSTE 66
Query: 164 TDTDLGTIYSV--TVPVRRVK 182
+DT+ G++ ++ +P++ ++
Sbjct: 67 SDTNNGSVPAIFANIPIKDMR 87
>sp|B1KZS3|MINE_CLOBM Cell division topological specificity factor OS=Clostridium
botulinum (strain Loch Maree / Type A3) GN=minE PE=3
SV=1
Length = 87
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 108 RNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDTD 167
+ S+ +AK+RL++IL DR ++S + I +++ +S ++EI+++D V + +S+ +
Sbjct: 9 KQSSKDVAKERLKLILIQDRNSISPDVLESIREDMLKVISKYIEIDNED-VDIKMSSVEE 67
Query: 168 LGTI---YSVTVPVRRVK 182
+ + ++P++R+K
Sbjct: 68 IEGMSPALIASIPIKRIK 85
>sp|A7GHL2|MINE_CLOBL Cell division topological specificity factor OS=Clostridium
botulinum (strain Langeland / NCTC 10281 / Type F)
GN=minE PE=3 SV=1
Length = 87
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 108 RNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDTD 167
+ S+ +AK+RL++IL DR ++S + I +++ +S ++EI+++D V + +S+ +
Sbjct: 9 KQSSKDVAKERLKLILIQDRNSISPDVLESIREDMLKVISKYIEIDNED-VDIKMSSVEE 67
Query: 168 LGTI---YSVTVPVRRVK 182
+ + ++P++R+K
Sbjct: 68 IEGMSPALIASIPIKRIK 85
>sp|B1ILZ5|MINE_CLOBK Cell division topological specificity factor OS=Clostridium
botulinum (strain Okra / Type B1) GN=minE PE=3 SV=1
Length = 87
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 108 RNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDTD 167
+ S+ +AK+RL++IL DR ++S + I +++ +S ++EI+++D V + +S+ +
Sbjct: 9 KQSSKDVAKERLKLILIQDRNSISPDVLESIREDMLKVISKYIEIDNED-VDIKMSSVEE 67
Query: 168 LGTI---YSVTVPVRRVK 182
+ + ++P++R+K
Sbjct: 68 IEGMSPALIASIPIKRIK 85
>sp|C1FVX5|MINE_CLOBJ Cell division topological specificity factor OS=Clostridium
botulinum (strain Kyoto / Type A2) GN=minE PE=3 SV=1
Length = 87
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 108 RNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDTD 167
+ S+ +AK+RL++IL DR ++S + I +++ +S ++EI+++D V + +S+ +
Sbjct: 9 KQSSKDVAKERLKLILIQDRNSISPDVLESIREDMLKVISKYIEIDNED-VDIKMSSVEE 67
Query: 168 LGTI---YSVTVPVRRVK 182
+ + ++P++R+K
Sbjct: 68 IEGMSPALIASIPIKRIK 85
>sp|A5I676|MINE_CLOBH Cell division topological specificity factor OS=Clostridium
botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type
A) GN=minE PE=3 SV=1
Length = 87
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 108 RNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDTD 167
+ S+ +AK+RL++IL DR ++S + I +++ +S ++EI+++D V + +S+ +
Sbjct: 9 KQSSKDVAKERLKLILIQDRNSISPDVLESIREDMLKVISKYIEIDNED-VDIKMSSVEE 67
Query: 168 LGTI---YSVTVPVRRVK 182
+ + ++P++R+K
Sbjct: 68 IEGMSPALIASIPIKRIK 85
>sp|C3L3K3|MINE_CLOB6 Cell division topological specificity factor OS=Clostridium
botulinum (strain 657 / Type Ba4) GN=minE PE=3 SV=1
Length = 87
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 108 RNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDTD 167
+ S+ +AK+RL++IL DR ++S + I +++ +S ++EI+++D V + +S+ +
Sbjct: 9 KQSSKDVAKERLKLILIQDRNSISPDVLESIREDMLKVISKYIEIDNED-VDIKMSSVEE 67
Query: 168 LGTI---YSVTVPVRRVK 182
+ + ++P++R+K
Sbjct: 68 IEGMSPALIASIPIKRIK 85
>sp|A7FXV6|MINE_CLOB1 Cell division topological specificity factor OS=Clostridium
botulinum (strain ATCC 19397 / Type A) GN=minE PE=3 SV=1
Length = 87
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 108 RNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDTD 167
+ S+ +AK+RL++IL DR ++S + I +++ +S ++EI+++D V + +S+ +
Sbjct: 9 KQSSKDVAKERLKLILIQDRNSISPDVLESIREDMLKVISKYIEIDNED-VDIKMSSVEE 67
Query: 168 LGTI---YSVTVPVRRVK 182
+ + ++P++R+K
Sbjct: 68 IEGMSPALIASIPIKRIK 85
>sp|Q8DHE1|MINE_THEEB Cell division topological specificity factor OS=Thermosynechococcus
elongatus (strain BP-1) GN=minE PE=3 SV=1
Length = 106
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 106 TRRNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTD 165
TR + AK+RL+++L DR A++ E + +I+ +S +VE+E++ L VS +
Sbjct: 11 TRTPPSRTTAKERLKLVLAHDRTALTPEILDNLRRDILEVVSRYVELETEG---LAVSLE 67
Query: 166 TDLGTIYSVT-VPVRRVK 182
+D T + +P++R+K
Sbjct: 68 SDQRTTALIANLPIKRLK 85
>sp|Q3AUX8|MINE_SYNS9 Cell division topological specificity factor OS=Synechococcus sp.
(strain CC9902) GN=minE PE=3 SV=1
Length = 95
Score = 38.9 bits (89), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 107 RRNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDT 166
R+ S+A AKQRLQ++L DR ++ E ++ I+ ++ +VEI+ ++ +VS +T
Sbjct: 13 RQTSSASTAKQRLQLVLAHDRSDLNPELLAQMRREILEVVARYVEIDIEEG---DVSLET 69
Query: 167 -DLGTIYSVTVPVRR 180
D T +P+RR
Sbjct: 70 EDRMTALVANLPIRR 84
>sp|Q3AMC8|MINE_SYNSC Cell division topological specificity factor OS=Synechococcus sp.
(strain CC9605) GN=minE PE=3 SV=1
Length = 102
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 107 RRNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDT 166
R+ ++A AK+RLQ++L DR ++ E ++ I+ ++ +VEI D Q +VS +T
Sbjct: 13 RQPASAETAKERLQLVLAHDRSDLNPELLEQMRREILEVVARYVEI---DLAQGDVSLET 69
Query: 167 -DLGTIYSVTVPVRR 180
D T +P+RR
Sbjct: 70 EDRVTALVANLPIRR 84
>sp|A5D434|MINE_PELTS Cell division topological specificity factor OS=Pelotomaculum
thermopropionicum (strain DSM 13744 / JCM 10971 / SI)
GN=minE PE=3 SV=1
Length = 90
Score = 38.5 bits (88), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 114 IAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDTDLGTIYS 173
+AK+RL+++L DR ++S + + ++ +S+++EI D+ L VS D+ T+
Sbjct: 18 VAKERLRLVLVHDRTSISPQLLETLKAELIKVISNYMEI---DEAALEVSLDSSGNTVAL 74
Query: 174 V-TVPVRRVK 182
V ++PV+ +K
Sbjct: 75 VASIPVKGMK 84
>sp|Q67SI1|MINE_SYMTH Cell division topological specificity factor OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=minE PE=3 SV=1
Length = 92
Score = 38.5 bits (88), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 107 RRNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDT 166
R +S+A IA++RL+++L DR VS + + ++ +S ++EIE + ++V+ T
Sbjct: 11 RDHSSADIARERLRLVLVHDRTNVSPQFLETLKEELIEVISRYMEIEEEG---MDVTLQT 67
Query: 167 DLGTIYSVT-VPVRRVK 182
+ V +PVRR+K
Sbjct: 68 AENQVALVANIPVRRMK 84
>sp|B0K429|MINE_THEPX Cell division topological specificity factor OS=Thermoanaerobacter
sp. (strain X514) GN=minE PE=3 SV=1
Length = 91
Score = 38.1 bits (87), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 50/82 (60%), Gaps = 11/82 (13%)
Query: 108 RNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNV----- 162
+N++ IAK+RLQ++L DR VS + I +I++ +S++V+I D+ LNV
Sbjct: 10 KNNSKNIAKERLQLLLVHDRADVSPKFLEMIKEDILNVISNYVDI---DEAGLNVEITKE 66
Query: 163 --STDTDLGTIYSVTVPVRRVK 182
S +T + +++ +P++++K
Sbjct: 67 KRSDNTYIPALHA-NIPIKKMK 87
>sp|B0KAD3|MINE_THEP3 Cell division topological specificity factor OS=Thermoanaerobacter
pseudethanolicus (strain ATCC 33223 / 39E) GN=minE PE=3
SV=1
Length = 91
Score = 38.1 bits (87), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 50/82 (60%), Gaps = 11/82 (13%)
Query: 108 RNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNV----- 162
+N++ IAK+RLQ++L DR VS + I +I++ +S++V+I D+ LNV
Sbjct: 10 KNNSKNIAKERLQLLLVHDRADVSPKFLEMIKEDILNVISNYVDI---DEAGLNVEITKE 66
Query: 163 --STDTDLGTIYSVTVPVRRVK 182
S +T + +++ +P++++K
Sbjct: 67 KRSDNTYIPALHA-NIPIKKMK 87
>sp|A9KKZ8|MINE_CLOPH Cell division topological specificity factor OS=Clostridium
phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)
GN=minE PE=3 SV=1
Length = 90
Score = 37.7 bits (86), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 31/49 (63%)
Query: 107 RRNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQ 155
++ ++ +AK RL+++L SDR S E +I N+I+ +S ++ I+ +
Sbjct: 8 KKKASGSVAKDRLKLVLVSDRAGCSPEIMEQIKNDIIAVISKYIVIDQE 56
>sp|B1I4Q9|MINE_DESAP Cell division topological specificity factor OS=Desulforudis
audaxviator (strain MP104C) GN=minE PE=3 SV=1
Length = 89
Score = 37.4 bits (85), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 114 IAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTD-TDLGTIY 172
+AK+RL+++L DR +S + + + N IV +S ++EI+ + L VS + D
Sbjct: 18 VAKERLRLVLIHDRADISPQLLQLLKNEIVEVISKYMEIDDKG---LEVSLEHVDKQVAL 74
Query: 173 SVTVPVRRVK 182
+P+R++K
Sbjct: 75 VANIPIRKMK 84
>sp|Q7V5B5|MINE_PROMM Cell division topological specificity factor OS=Prochlorococcus
marinus (strain MIT 9313) GN=minE PE=3 SV=1
Length = 118
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 107 RRNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDT 166
R+ ++A+ A++RLQ++L DR +S E ++ I ++ +VEI+ ++ VS +T
Sbjct: 15 RQPASAKTARERLQLVLAHDRSDLSPELLDQMRREIFEVVAKYVEIDLEEG---EVSLET 71
Query: 167 -DLGTIYSVTVPVRRVKPEYLDSYDVG 192
D T +P++R + + + S + G
Sbjct: 72 EDRMTALVANLPIKRSQAKAVSSQENG 98
>sp|B2TK62|MINE_CLOBB Cell division topological specificity factor OS=Clostridium
botulinum (strain Eklund 17B / Type B) GN=minE PE=3 SV=1
Length = 88
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 108 RNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDTD 167
R + ++AK RL++IL DR + + KI I+ +S ++EI+ D V+++V+ D
Sbjct: 10 RPTPKQVAKDRLKLILIHDRGEIPTDTLEKIRKEILGVISKYIEIQVDD-VEISVNKSED 68
Query: 168 L 168
+
Sbjct: 69 M 69
>sp|B2V097|MINE_CLOBA Cell division topological specificity factor OS=Clostridium
botulinum (strain Alaska E43 / Type E3) GN=minE PE=3
SV=1
Length = 88
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 108 RNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDTD 167
R + ++AK RL++IL DR + + KI I+ +S ++EI+ D V+++V+ D
Sbjct: 10 RPTPKQVAKDRLKLILIHDRGEIPTDTLEKIRKEILGVISKYIEIQVDD-VEISVNKSED 68
Query: 168 L 168
+
Sbjct: 69 M 69
>sp|Q55899|MINE_SYNY3 Putative cell division topological specificity factor
OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=minE
PE=3 SV=1
Length = 97
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 115 AKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDTDLGTIYSV 174
A++RL++++ +DR +S E ++ IV +S +VEI+ + ++ ++ +D + + +
Sbjct: 21 ARRRLKLVIANDRSGLSPEMMEEMRREIVEVVSRYVEIDPGE-MEFSLESDQRMTALIA- 78
Query: 175 TVPVRRVK 182
+PVRRV+
Sbjct: 79 NLPVRRVR 86
>sp|C4Z9Q2|MINE_EUBR3 Cell division topological specificity factor OS=Eubacterium rectale
(strain ATCC 33656 / VPI 0990) GN=minE PE=3 SV=1
Length = 93
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 107 RRNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQ--DKVQLNVST 164
++ S+ +AK RL+++L SDR S E + +I+ +S +++I+++ D +
Sbjct: 8 KKKSSGNVAKDRLKLVLVSDRANCSSEMMEMMKRDIIEVISRYMDIDAEALDVKITETES 67
Query: 165 DTDLGTIYSVT--VPVRRVK 182
D++ G + ++ +P+R +K
Sbjct: 68 DSNNGMVPALVANIPIRDMK 87
>sp|Q24SN0|MINE_DESHY Cell division topological specificity factor OS=Desulfitobacterium
hafniense (strain Y51) GN=minE PE=3 SV=1
Length = 91
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 114 IAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDTDLGTIYS 173
+AK+RL+++L DR +S ++ +++ +S+++EI+ + +++N++ D D
Sbjct: 18 VAKERLRLVLVHDRATISPHMLNQLKEDLIKVISNYMEID-EGALEVNLNQD-DREVALI 75
Query: 174 VTVPVRRVKPEY 185
+PV ++K +Y
Sbjct: 76 ANIPVIKMKRDY 87
>sp|B8FUT0|MINE_DESHD Cell division topological specificity factor OS=Desulfitobacterium
hafniense (strain DCB-2 / DSM 10664) GN=minE PE=3 SV=1
Length = 91
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 114 IAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDTDLGTIYS 173
+AK+RL+++L DR +S ++ +++ +S+++EI+ + +++N++ D D
Sbjct: 18 VAKERLRLVLVHDRATISPHMLNQLKEDLIKVISNYMEID-EGALEVNLNQD-DREVALI 75
Query: 174 VTVPVRRVKPEY 185
+PV ++K +Y
Sbjct: 76 ANIPVIKMKRDY 87
>sp|A5GR30|MINE_SYNR3 Cell division topological specificity factor OS=Synechococcus sp.
(strain RCC307) GN=minE PE=3 SV=1
Length = 97
Score = 35.4 bits (80), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 107 RRNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDT 166
R+ ++A AK RLQ++L DR ++ + ++ I+ ++ +VE++ + +VS +T
Sbjct: 13 RQQASATTAKHRLQLVLAHDRSDLNPDLMEQMRREILEVVNRYVELDLEGG---DVSLET 69
Query: 167 -DLGTIYSVTVPVRRVKPEYL 186
+ T +P+RRV+ + L
Sbjct: 70 EERATALVANLPIRRVRDDVL 90
>sp|B0TBY0|MINE_HELMI Cell division topological specificity factor OS=Heliobacterium
modesticaldum (strain ATCC 51547 / Ice1) GN=minE PE=3
SV=1
Length = 89
Score = 35.0 bits (79), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 114 IAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDTDLGTIYS 173
IAK+RL+++L DR +VS E + +++ +S ++EI D+ L V+ + D ++
Sbjct: 19 IAKERLRLVLVHDRSSVSPEIVEALKEDLIKVISSYMEI---DERSLEVNLNNDEASVAL 75
Query: 174 VT-VPVRRVK 182
V +PV +K
Sbjct: 76 VANIPVLGLK 85
>sp|A8MHL7|MINE_ALKOO Cell division topological specificity factor OS=Alkaliphilus
oremlandii (strain OhILAs) GN=minE PE=3 SV=1
Length = 93
Score = 35.0 bits (79), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 24/110 (21%)
Query: 97 WKIVFPSPTTRRNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQD 156
WK +T +N +AK+RL+++L DR S + + +I+ +SD++EI+
Sbjct: 4 WKFFSKESSTSKN----VAKERLKLVLVHDRANCSPDFLEMVKGDIIKVISDYMEIDED- 58
Query: 157 KVQLNVSTDTDLGTIYSVTVPVRRVKPEYLDSYDVGTIANV---EYKDTG 203
+ + + + K EY D+ +AN+ + KD G
Sbjct: 59 ----------------GLDIRLTKTKREYDDASIPALVANIPIKKMKDRG 92
>sp|O78435|MINE_GUITH Putative cell division topological specificity factor OS=Guillardia
theta GN=minE PE=3 SV=1
Length = 88
Score = 35.0 bits (79), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 115 AKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDTDLGTIYSV 174
K+RL+++L DR ++ K+ I+ +S +VE+++ D ++ ++ TD+ + + +
Sbjct: 20 VKRRLKLVLAHDRSTLNASTLEKMREEILLVVSKYVELDT-DSLEFSIRTDSKMTALIA- 77
Query: 175 TVPVRRV 181
+P+RR+
Sbjct: 78 NLPIRRI 84
>sp|Q7U4U1|MINE_SYNPX Cell division topological specificity factor OS=Synechococcus sp.
(strain WH8102) GN=minE PE=3 SV=1
Length = 86
Score = 34.7 bits (78), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 107 RRNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDT 166
R+ ++A A+QRLQ++L DR ++ E ++ I+ +S +VEI D + +VS +T
Sbjct: 13 RQPASADTARQRLQLVLAHDRSDLNPELLDQMRREILEVVSRYVEI---DLSEGDVSLET 69
Query: 167 -DLGTIYSVTVPVRR 180
D T +P+RR
Sbjct: 70 EDRVTALVANLPIRR 84
>sp|Q6F8Q3|TTCA_ACIAD tRNA 2-thiocytidine biosynthesis protein TtcA OS=Acinetobacter sp.
(strain ADP1) GN=ttcA PE=3 SV=1
Length = 301
Score = 34.3 bits (77), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 136 RKIVNNIVHALSDFVEIESQDKVQLNVSTDTDLGTIYSVTVPVRRVKP 183
+K+ + HA+ DF IE DKV + VS D T+ + + +R+ P
Sbjct: 28 KKLRRQVGHAIRDFKMIEDGDKVMVCVSGGKDSYTLLDILLQFKRIAP 75
>sp|B9LFG6|MINE_CHLSY Cell division topological specificity factor OS=Chloroflexus
aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl)
GN=minE PE=3 SV=1
Length = 91
Score = 33.9 bits (76), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 107 RRNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDT 166
+R+S+A +AKQRL +L DR ++ E ++ ++ L ++ +++++ +S
Sbjct: 11 KRDSSAELAKQRLLTVLIDDRYKLTPEMMAQMKADLAEVLKRYLPAIDAEQIEVTLSR-G 69
Query: 167 DLGTIYSVTVPVRRV 181
+ + VP+RR
Sbjct: 70 EAHDLLKADVPLRRA 84
>sp|A9WAN7|MINE_CHLAA Cell division topological specificity factor OS=Chloroflexus
aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
GN=minE PE=3 SV=1
Length = 91
Score = 33.9 bits (76), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 107 RRNSNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDT 166
+R+S+A +AKQRL +L DR ++ E ++ ++ L ++ +++++ +S
Sbjct: 11 KRDSSAELAKQRLLTVLIDDRYKLTPEMMAQMKADLAEVLKRYLPAIDAEQIEVTLSR-G 69
Query: 167 DLGTIYSVTVPVRRV 181
+ + VP+RR
Sbjct: 70 EAHDLLKADVPLRRA 84
>sp|A6TQI5|MINE_ALKMQ Cell division topological specificity factor OS=Alkaliphilus
metalliredigens (strain QYMF) GN=minE PE=3 SV=1
Length = 94
Score = 33.9 bits (76), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 110 SNARIAKQRLQMILFSDRCAVSDEAKRKIVNNIVHALSDFVEIESQDKVQLNVSTDT 166
++ ++AK+RL+++L DR S + +I+ +SD+VEI D+V L + T
Sbjct: 14 TSKKVAKERLKLVLVHDRTNCSPRFLEMLKEDIIKVISDYVEI---DEVGLEIKLTT 67
>sp|A3M828|TTCA_ACIBT tRNA 2-thiocytidine biosynthesis protein TtcA OS=Acinetobacter
baumannii (strain ATCC 17978 / NCDC KC 755) GN=ttcA PE=3
SV=2
Length = 301
Score = 33.9 bits (76), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 136 RKIVNNIVHALSDFVEIESQDKVQLNVSTDTDLGTIYSVTVPVRRVKP 183
+K+ + HA+ DF IE DKV + VS D T+ + + +R+ P
Sbjct: 28 KKLRRQVGHAIRDFNMIEDGDKVMVCVSGGKDSYTLLDILLQFKRIAP 75
>sp|B0VT10|TTCA_ACIBS tRNA 2-thiocytidine biosynthesis protein TtcA OS=Acinetobacter
baumannii (strain SDF) GN=ttcA PE=3 SV=1
Length = 301
Score = 33.9 bits (76), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 136 RKIVNNIVHALSDFVEIESQDKVQLNVSTDTDLGTIYSVTVPVRRVKP 183
+K+ + HA+ DF IE DKV + VS D T+ + + +R+ P
Sbjct: 28 KKLRRQVGHAIRDFNMIEDGDKVMVCVSGGKDSYTLLDILLQFKRIAP 75
>sp|B0VDQ2|TTCA_ACIBY tRNA 2-thiocytidine biosynthesis protein TtcA OS=Acinetobacter
baumannii (strain AYE) GN=ttcA PE=3 SV=1
Length = 301
Score = 33.9 bits (76), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 136 RKIVNNIVHALSDFVEIESQDKVQLNVSTDTDLGTIYSVTVPVRRVKP 183
+K+ + HA+ DF IE DKV + VS D T+ + + +R+ P
Sbjct: 28 KKLRRQVGHAIRDFNMIEDGDKVMVCVSGGKDSYTLLDILLQFKRIAP 75
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,474,369
Number of Sequences: 539616
Number of extensions: 3021788
Number of successful extensions: 7164
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 7081
Number of HSP's gapped (non-prelim): 103
length of query: 220
length of database: 191,569,459
effective HSP length: 113
effective length of query: 107
effective length of database: 130,592,851
effective search space: 13973435057
effective search space used: 13973435057
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)