Your job contains 1 sequence.
>027652
MSTWELGQCLGRNARDSQRRRILPELDLNYPPTDGNIATNSQEYPFDGHSDSRGDIGDCV
EVIDDDLAIINQRIFAEAKNNSRRNHSQVVDQLRHVLTDAGGLLDSLQEVTDLAILYVKQ
RRNRPDEATPDNCCINVDTSNNNKNDAAPLQLPQDPMAAAPTFSCPICMGPLSEATSTKC
GHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRVYLPTLS
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027652
(220 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2098505 - symbol:AT3G07200 species:3702 "Arabi... 219 4.3e-23 2
TAIR|locus:505006682 - symbol:AT5G48655 species:3702 "Ara... 266 4.8e-23 1
FB|FBgn0037384 - symbol:dgrn "degringolade" species:7227 ... 171 1.5e-12 1
MGI|MGI:1201691 - symbol:Rnf4 "ring finger protein 4" spe... 146 2.5e-10 1
UNIPROTKB|F1ND52 - symbol:RNF4 "Uncharacterized protein" ... 143 5.2e-10 1
UNIPROTKB|F6RV66 - symbol:RNF4 "Uncharacterized protein" ... 143 5.2e-10 1
UNIPROTKB|F1S8Q2 - symbol:RNF4 "Uncharacterized protein" ... 143 5.2e-10 1
UNIPROTKB|J9NS55 - symbol:RNF4 "Uncharacterized protein" ... 142 6.6e-10 1
UNIPROTKB|F1PF91 - symbol:RNF4 "Uncharacterized protein" ... 142 1.1e-09 1
UNIPROTKB|F1PC91 - symbol:RNF4 "Uncharacterized protein" ... 140 1.1e-09 1
UNIPROTKB|F1NLH3 - symbol:RNF4 "Uncharacterized protein" ... 139 8.9e-09 1
RGD|3583 - symbol:Rnf4 "ring finger protein 4" species:10... 138 1.0e-08 1
ZFIN|ZDB-GENE-041008-246 - symbol:im:7142942 "im:7142942"... 133 2.1e-08 1
UNIPROTKB|H0YAI5 - symbol:RNF4 "E3 ubiquitin-protein liga... 128 2.8e-08 1
UNIPROTKB|F5H1U2 - symbol:RNF4 "E3 ubiquitin-protein liga... 132 1.0e-07 1
UNIPROTKB|P78317 - symbol:RNF4 "E3 ubiquitin-protein liga... 132 1.0e-07 1
UNIPROTKB|H0Y340 - symbol:RFWD2 "E3 ubiquitin-protein lig... 119 3.1e-07 1
UNIPROTKB|D6RA71 - symbol:RNF4 "E3 ubiquitin-protein liga... 126 8.2e-07 1
RGD|1306757 - symbol:Rnf125 "ring finger protein 125" spe... 128 1.6e-06 1
MGI|MGI:1914914 - symbol:Rnf125 "ring finger protein 125"... 127 2.2e-06 1
UNIPROTKB|K7GL56 - symbol:LOC100517591 "Uncharacterized p... 124 3.0e-06 1
UNIPROTKB|H0YH05 - symbol:RNF10 "RING finger protein 10" ... 110 3.4e-06 1
MGI|MGI:1914754 - symbol:Rnf151 "ring finger protein 151"... 125 4.3e-06 1
UNIPROTKB|F1SAL7 - symbol:LOC100517591 "Uncharacterized p... 124 5.1e-06 1
UNIPROTKB|Q96EQ8 - symbol:RNF125 "E3 ubiquitin-protein li... 123 7.0e-06 1
ZFIN|ZDB-GENE-041010-71 - symbol:pex10 "peroxisome biogen... 109 9.6e-06 2
UNIPROTKB|H7C5V9 - symbol:LONRF1 "LON peptidase N-termina... 126 9.9e-06 1
DICTYBASE|DDB_G0273535 - symbol:mip1-2 "MEK1 interacting ... 128 1.1e-05 1
DICTYBASE|DDB_G0273399 - symbol:mip1-1 "MEK1 interacting ... 128 1.1e-05 1
UNIPROTKB|E1BJY5 - symbol:RNF125 "Uncharacterized protein... 121 1.2e-05 1
UNIPROTKB|J9PBI0 - symbol:RNF125 "Uncharacterized protein... 121 1.2e-05 1
UNIPROTKB|H3BPQ8 - symbol:BFAR "Bifunctional apoptosis re... 105 1.3e-05 1
UNIPROTKB|H3BRQ5 - symbol:BFAR "Bifunctional apoptosis re... 105 1.3e-05 1
UNIPROTKB|H3BUB3 - symbol:BFAR "Bifunctional apoptosis re... 105 1.3e-05 1
UNIPROTKB|D6RAL3 - symbol:SH3RF1 "E3 ubiquitin-protein li... 104 1.7e-05 1
UNIPROTKB|D6RHX5 - symbol:SH3RF1 "E3 ubiquitin-protein li... 104 1.7e-05 1
RGD|1309302 - symbol:Rnf151 "ring finger protein 151" spe... 120 1.8e-05 1
DICTYBASE|DDB_G0285333 - symbol:DDB_G0285333 "RING finger... 121 2.1e-05 1
ZFIN|ZDB-GENE-030131-5958 - symbol:wu:fi27d05 "wu:fi27d05... 127 2.2e-05 2
POMBASE|SPBC3D6.11c - symbol:slx8 "SUMO-targeted ubiquiti... 120 2.6e-05 1
ZFIN|ZDB-GENE-101021-4 - symbol:lonrf1 "LON peptidase N-t... 125 2.7e-05 1
CGD|CAL0005238 - symbol:orf19.5438 species:5476 "Candida ... 102 2.8e-05 1
UNIPROTKB|F1NCS0 - symbol:F1NCS0 "Uncharacterized protein... 102 2.8e-05 1
UNIPROTKB|F8WD60 - symbol:RNF168 "E3 ubiquitin-protein li... 102 2.8e-05 1
FB|FBgn0032660 - symbol:elfless "elfless" species:7227 "D... 118 2.9e-05 1
UNIPROTKB|I3L5Q2 - symbol:RNF151 "Uncharacterized protein... 117 3.9e-05 1
ZFIN|ZDB-GENE-030131-5243 - symbol:rnf2 "ring finger prot... 120 4.2e-05 1
UNIPROTKB|F8W8Z4 - symbol:RNF40 "E3 ubiquitin-protein lig... 124 4.3e-05 1
RGD|1305491 - symbol:Rnf2 "ring finger protein 2" species... 119 4.6e-05 1
FB|FBgn0036897 - symbol:CG8786 species:7227 "Drosophila m... 122 4.6e-05 1
DICTYBASE|DDB_G0270568 - symbol:DDB_G0270568 "C3HC4-type ... 121 4.7e-05 1
FB|FBgn0036421 - symbol:CG13481 species:7227 "Drosophila ... 103 5.2e-05 2
UNIPROTKB|F1RG77 - symbol:RNF40 "Uncharacterized protein"... 125 5.2e-05 1
UNIPROTKB|E1BCI2 - symbol:RNF40 "Uncharacterized protein"... 125 5.2e-05 1
UNIPROTKB|E2R1L5 - symbol:RNF40 "Uncharacterized protein"... 125 5.2e-05 1
MGI|MGI:2142048 - symbol:Rnf40 "ring finger protein 40" s... 125 5.2e-05 1
RGD|628638 - symbol:Rnf40 "ring finger protein 40, E3 ubi... 125 5.2e-05 1
UNIPROTKB|E1BQF7 - symbol:RNF2 "Uncharacterized protein" ... 119 5.5e-05 1
UNIPROTKB|A6QLQ0 - symbol:RNF2 "RNF2 protein" species:991... 119 5.5e-05 1
UNIPROTKB|Q99496 - symbol:RNF2 "E3 ubiquitin-protein liga... 119 5.5e-05 1
UNIPROTKB|F1S3N6 - symbol:RNF2 "Uncharacterized protein" ... 119 5.5e-05 1
UNIPROTKB|Q5R9J5 - symbol:RNF2 "E3 ubiquitin-protein liga... 119 5.5e-05 1
MGI|MGI:1101759 - symbol:Rnf2 "ring finger protein 2" spe... 119 5.5e-05 1
UNIPROTKB|E2RFW1 - symbol:RNF2 "Uncharacterized protein" ... 119 5.5e-05 1
GENEDB_PFALCIPARUM|PF11_0244 - symbol:PF11_0244 "hypothet... 123 5.7e-05 1
UNIPROTKB|Q8IID0 - symbol:PF11_0244 "Conserved Plasmodium... 123 5.7e-05 1
UNIPROTKB|Q2TBT8 - symbol:RNF151 "RING finger protein 151... 116 5.7e-05 1
UNIPROTKB|F1Q031 - symbol:RNF151 "Uncharacterized protein... 116 6.0e-05 1
UNIPROTKB|J3KSI2 - symbol:RNF138 "E3 ubiquitin-protein li... 99 6.1e-05 1
UNIPROTKB|H3BP71 - symbol:RNF40 "E3 ubiquitin-protein lig... 124 6.5e-05 1
UNIPROTKB|O75150 - symbol:RNF40 "E3 ubiquitin-protein lig... 124 6.8e-05 1
UNIPROTKB|Q4R7K7 - symbol:RNF40 "E3 ubiquitin-protein lig... 124 6.8e-05 1
UNIPROTKB|Q5RAU7 - symbol:RNF40 "E3 ubiquitin-protein lig... 124 6.8e-05 1
ZFIN|ZDB-GENE-060929-548 - symbol:btr12 "bloodthirsty-rel... 121 7.3e-05 1
UNIPROTKB|Q7ZWM8 - symbol:rnf2-b "E3 ubiquitin-protein li... 118 7.6e-05 1
UNIPROTKB|Q66J69 - symbol:rnf2-a "E3 ubiquitin-protein li... 118 7.6e-05 1
TAIR|locus:2086666 - symbol:AT3G27330 species:3702 "Arabi... 123 8.1e-05 1
UNIPROTKB|Q2KHN1 - symbol:RNF151 "RING finger protein 151... 115 8.2e-05 1
UNIPROTKB|F1S705 - symbol:RFWD2 "Uncharacterized protein"... 119 8.3e-05 1
RGD|1359645 - symbol:Trim40 "tripartite motif-containing ... 115 8.4e-05 1
UNIPROTKB|Q6MFY8 - symbol:Trim40 "Tripartite motif-contai... 115 8.4e-05 1
FB|FBgn0003330 - symbol:Sce "Sex combs extra" species:722... 119 8.6e-05 1
UNIPROTKB|A1YER5 - symbol:RING1 "E3 ubiquitin-protein lig... 118 9.0e-05 1
UNIPROTKB|A1YFY1 - symbol:RING1 "E3 ubiquitin-protein lig... 118 9.0e-05 1
UNIPROTKB|A2T6X5 - symbol:RING1 "E3 ubiquitin-protein lig... 118 9.0e-05 1
UNIPROTKB|Q8WMN5 - symbol:RING1 "E3 ubiquitin-protein lig... 118 9.0e-05 1
UNIPROTKB|F1MUV0 - symbol:RING1 "Uncharacterized protein"... 118 9.2e-05 1
UNIPROTKB|Q5TJF3 - symbol:RING1 "E3 ubiquitin-protein lig... 118 0.00010 1
UNIPROTKB|Q06587 - symbol:RING1 "E3 ubiquitin-protein lig... 118 0.00010 1
UNIPROTKB|A5D9P0 - symbol:RING1 "Ring finger protein 1" s... 118 0.00010 1
MGI|MGI:1101770 - symbol:Ring1 "ring finger protein 1" sp... 118 0.00010 1
RGD|3576 - symbol:Ring1 "ring finger protein 1" species:1... 118 0.00010 1
UNIPROTKB|A6NL11 - symbol:TRIM15 "Tripartite motif-contai... 97 0.00010 1
UNIPROTKB|E9PN08 - symbol:RNF5 "E3 ubiquitin-protein liga... 97 0.00010 1
UNIPROTKB|E7EQW4 - symbol:BRCA1 "Breast cancer type 1 sus... 113 0.00011 1
MGI|MGI:2684881 - symbol:Trim40 "tripartite motif-contain... 114 0.00011 1
DICTYBASE|DDB_G0272234 - symbol:pex2 "peroxisomal biogene... 118 0.00011 1
UNIPROTKB|H0YFN9 - symbol:RNF10 "RING finger protein 10" ... 110 0.00011 1
ZFIN|ZDB-GENE-070410-134 - symbol:rfwd2 "ring finger and ... 120 0.00013 1
UNIPROTKB|F5H012 - symbol:TRIM21 "E3 ubiquitin-protein li... 118 0.00013 1
WARNING: Descriptions of 86 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2098505 [details] [associations]
symbol:AT3G07200 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002686 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 HSSP:P38398
EMBL:AC012395 ProtClustDB:CLSN2689957 IPI:IPI00548065
RefSeq:NP_001078119.1 RefSeq:NP_187376.1 UniGene:At.40383
ProteinModelPortal:Q9SFV0 SMR:Q9SFV0 EnsemblPlants:AT3G07200.1
EnsemblPlants:AT3G07200.2 GeneID:819908 KEGG:ath:AT3G07200
TAIR:At3g07200 InParanoid:Q9SFV0 OMA:NRRTRRE PhylomeDB:Q9SFV0
Genevestigator:Q9SFV0 Uniprot:Q9SFV0
Length = 182
Score = 219 (82.2 bits), Expect = 4.3e-23, Sum P(2) = 4.3e-23
Identities = 40/84 (47%), Positives = 53/84 (63%)
Query: 140 SNNNKNDAAPLQLPQDPMAAAPT-----FSCPICMGPLSEATSTKCGHIFCKDCIKGAIA 194
S+ D+ L P+ A AP FSCPIC+ P ++ STKCGHIFCK CIK A++
Sbjct: 97 SDQTSVDSVELNKPRKSKAVAPPVEEPKFSCPICLCPFTQEVSTKCGHIFCKKCIKNALS 156
Query: 195 AQGKCPNCRQKVGKRGIFRVYLPT 218
Q KCP CR+K+ + + RV+LPT
Sbjct: 157 LQAKCPTCRKKITVKDLIRVFLPT 180
Score = 62 (26.9 bits), Expect = 4.3e-23, Sum P(2) = 4.3e-23
Identities = 16/30 (53%), Positives = 18/30 (60%)
Query: 64 DDDLAIINQRIFAEAKNNSR--RNHSQVVD 91
DDD+ FA+AKN SR R SQVVD
Sbjct: 54 DDDVVESTASAFAQAKNKSRSARRGSQVVD 83
>TAIR|locus:505006682 [details] [associations]
symbol:AT5G48655 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=IEP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:NOG327779
EMBL:AY150482 EMBL:AK118224 IPI:IPI00544715 RefSeq:NP_568701.1
RefSeq:NP_851156.1 RefSeq:NP_974908.1 UniGene:At.22299
ProteinModelPortal:Q8GS41 SMR:Q8GS41 PaxDb:Q8GS41 PRIDE:Q8GS41
EnsemblPlants:AT5G48655.1 EnsemblPlants:AT5G48655.2
EnsemblPlants:AT5G48655.3 GeneID:834923 KEGG:ath:AT5G48655
TAIR:At5g48655 HOGENOM:HOG000070995 InParanoid:Q8GS41 OMA:PANISNK
PhylomeDB:Q8GS41 ProtClustDB:CLSN2689957 ArrayExpress:Q8GS41
Genevestigator:Q8GS41 Uniprot:Q8GS41
Length = 203
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 78/216 (36%), Positives = 112/216 (51%)
Query: 12 RNARDSQRRRILPELDLNYPPTD--GNIAT-NSQEYPFDGHSDSRGDIGDCVEVIDDDLA 68
R R ++RR+ + +DLN P D G A+ + P + I V+ I+DD+
Sbjct: 7 RVPRGNRRRKAV--IDLNAVPVDQEGTSASVRTLTVPITPSQPAPTMID--VDAIEDDVI 62
Query: 69 IINQRIFAEAKNNSR--RNHSQVVDQLRHVLTDAGGLLDSLQEVTDLAILYVKQRRNRPD 126
+ FAEAK+ SR R +VD ++GG +++ K+RR
Sbjct: 63 ESSASAFAEAKSKSRNARRRPLMVD------VESGGTTRFPANISN------KRRRIPSS 110
Query: 127 EATPD--NCCIN--VDTSNNNKNDAAPLQLPQDPMAAAPTFSCPICMGPLSEATSTKCGH 182
E+ D + +N V+ S+ AP P++P F+CPICM P +E STKCGH
Sbjct: 111 ESVIDCEHASVNDEVNMSSRVSRSKAPAPPPEEPK-----FTCPICMCPFTEEMSTKCGH 165
Query: 183 IFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRVYLPT 218
IFCK CIK AI+ QGKCP CR+KV + + RV+LPT
Sbjct: 166 IFCKGCIKMAISRQGKCPTCRKKVTAKELIRVFLPT 201
>FB|FBgn0037384 [details] [associations]
symbol:dgrn "degringolade" species:7227 "Drosophila
melanogaster" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0032183 "SUMO binding" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0033768 "SUMO-targeted ubiquitin ligase
complex" evidence=IC] [GO:0070201 "regulation of establishment of
protein localization" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0043393 "regulation of protein binding" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007530 "sex
determination" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IGI]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:AE014297 GO:GO:0005737 GO:GO:0045893
GO:GO:0022008 GO:GO:0046872 GO:GO:0008270 GO:GO:0043393
GO:GO:0009790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 HSSP:P38398 GO:GO:0007530 GO:GO:0070201
GO:GO:0033768 GeneTree:ENSGT00390000010318 UniGene:Dm.1077
GeneID:40725 KEGG:dme:Dmel_CG10981 CTD:40725 FlyBase:FBgn0037384
GenomeRNAi:40725 NextBio:820277 EMBL:AY060824 RefSeq:NP_649596.1
SMR:Q9VNJ0 IntAct:Q9VNJ0 MINT:MINT-766055 STRING:Q9VNJ0
EnsemblMetazoa:FBtr0078638 UCSC:CG10981-RA InParanoid:Q9VNJ0
OMA:IRATHKC Uniprot:Q9VNJ0
Length = 319
Score = 171 (65.3 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 30/56 (53%), Positives = 39/56 (69%)
Query: 163 FSCPICMGPLS--EATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRVYL 216
+ CPICM +S E STKCGH+FC++CI+ AI A KCP C +K+ R FR+YL
Sbjct: 264 YKCPICMDSVSKREPVSTKCGHVFCRECIETAIRATHKCPICNKKLTARQFFRIYL 319
>MGI|MGI:1201691 [details] [associations]
symbol:Rnf4 "ring finger protein 4" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0016605 "PML body" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0031491 "nucleosome binding"
evidence=ISO] [GO:0032184 "SUMO polymer binding" evidence=ISO]
[GO:0033142 "progesterone receptor binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051865 "protein autoubiquitination" evidence=ISO] [GO:0070534
"protein K63-linked ubiquitination" evidence=ISO] [GO:0070936
"protein K48-linked ubiquitination" evidence=ISO] [GO:0070979
"protein K11-linked ubiquitination" evidence=ISO] [GO:0085020
"protein K6-linked ubiquitination" evidence=ISO] [GO:0090169
"regulation of spindle assembly" evidence=ISO] [GO:0090234
"regulation of kinetochore assembly" evidence=ISO]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:1201691 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0046685 GO:GO:0046872
GO:GO:0003677 GO:GO:0016605 GO:GO:0008270 GO:GO:0045944
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0070979 InterPro:IPR017907 GO:GO:0070936 GO:GO:0070534
GO:GO:0031491 GO:GO:0051865 GO:GO:0085020 GO:GO:0032184 CTD:6047
eggNOG:NOG327779 HOVERGEN:HBG018577 OMA:THRQYHP OrthoDB:EOG4S4PHN
ChiTaRS:RNF4 GO:GO:0090234 GO:GO:0090169 EMBL:AF169300
EMBL:AK019171 EMBL:AK090162 EMBL:AK147057 EMBL:AK151116
EMBL:AK158987 EMBL:AK159778 EMBL:AK159949 EMBL:BC003282 EMBL:U95141
IPI:IPI00137942 RefSeq:NP_035408.1 UniGene:Mm.21281
ProteinModelPortal:Q9QZS2 SMR:Q9QZS2 STRING:Q9QZS2
PhosphoSite:Q9QZS2 PRIDE:Q9QZS2 Ensembl:ENSMUST00000030992
GeneID:19822 KEGG:mmu:19822 GeneTree:ENSGT00390000010318
InParanoid:Q9QZS2 NextBio:297289 PMAP-CutDB:Q9QZS2 Bgee:Q9QZS2
CleanEx:MM_RNF4 Genevestigator:Q9QZS2 GermOnline:ENSMUSG00000029110
Uniprot:Q9QZS2
Length = 194
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 36/112 (32%), Positives = 54/112 (48%)
Query: 121 RRNRPDEATPDNCCINVDTS--NNNKNDAAPLQLPQ---DPMAAAP----TFSCPICMGP 171
RR R D A D+C ++ D + +K+ P+ D A P T SCPICM
Sbjct: 85 RRLRQDHA--DSCVVSSDDEELSRDKDVYVTTHTPRSTKDDGATGPRPSGTVSCPICMDG 142
Query: 172 LSEAT-------STKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRVYL 216
SE ST+CGH+FC C++ ++ CP CR+K+ + +Y+
Sbjct: 143 YSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIYI 194
>UNIPROTKB|F1ND52 [details] [associations]
symbol:RNF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000010318
EMBL:AADN02014962 IPI:IPI00578455 Ensembl:ENSGALT00000025265
Uniprot:F1ND52
Length = 190
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 31/98 (31%), Positives = 48/98 (48%)
Query: 126 DEATPDNCCINVDTSNNNKNDAAPLQLPQDPMAAAPTFSCPICMGPLSEAT-------ST 178
++ T DN +V ++ + PL+ + T SCPICM SE ST
Sbjct: 96 EDETRDN---DVYVTDKVSRELGPLEDETASSKPSGTVSCPICMDGYSEIVQSGRLIVST 152
Query: 179 KCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRVYL 216
KCGH+FC C++ ++ CP CR+K+ R +Y+
Sbjct: 153 KCGHVFCSQCLRDSLRNANSCPTCRKKLTHRQYHPIYI 190
>UNIPROTKB|F6RV66 [details] [associations]
symbol:RNF4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090234 "regulation of kinetochore assembly"
evidence=IEA] [GO:0090169 "regulation of spindle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0015630 "microtubule
cytoskeleton" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0005634 GO:GO:0043161
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 OMA:THRQYHP GO:GO:0090234 GO:GO:0090169
GeneTree:ENSGT00390000010318 EMBL:DAAA02018497 IPI:IPI00704748
Ensembl:ENSBTAT00000039422 Uniprot:F6RV66
Length = 186
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 37/109 (33%), Positives = 52/109 (47%)
Query: 121 RRNRPDEATPDNCCINVDTSNNNKNDAAPLQLPQDPMAAA----P--TFSCPICMGPLSE 174
RR R D A D+C ++ D + D P +AA P T SCPICM SE
Sbjct: 81 RRLRQDHA--DSCVVSSDEEELAR-DKDVYVTTHSPRSAATGFRPSGTVSCPICMDGYSE 137
Query: 175 AT-------STKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRVYL 216
ST+CGHIFC C++ ++ CP CR+K+ + +Y+
Sbjct: 138 IVQNGRLIVSTECGHIFCSQCLRDSLKNANTCPTCRKKMSHKRYHPIYI 186
>UNIPROTKB|F1S8Q2 [details] [associations]
symbol:RNF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090234 "regulation of kinetochore assembly"
evidence=IEA] [GO:0090169 "regulation of spindle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0015630 "microtubule
cytoskeleton" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0005634 GO:GO:0043161
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 OMA:THRQYHP GO:GO:0090234 GO:GO:0090169
GeneTree:ENSGT00390000010318 EMBL:CU640885
Ensembl:ENSSSCT00000009507 ArrayExpress:F1S8Q2 Uniprot:F1S8Q2
Length = 190
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 36/112 (32%), Positives = 55/112 (49%)
Query: 121 RRNRPDEATPDNCCINVDTSNNNKN-DA-APLQLPQDPMAAA-----P--TFSCPICMGP 171
RR R D A D+C ++ D +++ D Q P++ A P T SCPICM
Sbjct: 81 RRLRQDHA--DSCVVSSDDEELSRDRDVYVTTQTPRNAREEAATGLRPSGTVSCPICMDG 138
Query: 172 LSEAT-------STKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRVYL 216
SE ST+CGH+FC C++ ++ CP CR+K+ + +Y+
Sbjct: 139 YSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIYI 190
>UNIPROTKB|J9NS55 [details] [associations]
symbol:RNF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000010318
EMBL:AAEX03002450 EMBL:AAEX03002451 Ensembl:ENSCAFT00000044321
Uniprot:J9NS55
Length = 191
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 36/112 (32%), Positives = 54/112 (48%)
Query: 121 RRNRPDEATPDNCCINVDTSNNNKN-DA-APLQLPQDPMAAA-----P--TFSCPICMGP 171
RR R D A D+C ++ D +++ D P++ A P T SCPICM
Sbjct: 82 RRPRQDHA--DSCVVSSDDEELSRDRDVYVTTHTPRNTREEAATGLRPSGTVSCPICMDG 139
Query: 172 LSEAT-------STKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRVYL 216
SE ST+CGH+FC C++ A+ CP CR+K+ + +Y+
Sbjct: 140 YSEIVQNGRLIVSTECGHVFCSQCLRDALKNANTCPTCRKKINHKRYHPIYI 191
>UNIPROTKB|F1PF91 [details] [associations]
symbol:RNF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 OMA:THRQYHP
GeneTree:ENSGT00390000010318 EMBL:AAEX03002450 EMBL:AAEX03002451
Ensembl:ENSCAFT00000023584 Uniprot:F1PF91
Length = 195
Score = 142 (55.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 36/112 (32%), Positives = 54/112 (48%)
Query: 121 RRNRPDEATPDNCCINVDTSNNNKN-DA-APLQLPQDPMAAA-----P--TFSCPICMGP 171
RR R D A D+C ++ D +++ D P++ A P T SCPICM
Sbjct: 86 RRPRQDHA--DSCVVSSDDEELSRDRDVYVTTHTPRNTREEAATGLRPSGTVSCPICMDG 143
Query: 172 LSEAT-------STKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRVYL 216
SE ST+CGH+FC C++ A+ CP CR+K+ + +Y+
Sbjct: 144 YSEIVQNGRLIVSTECGHVFCSQCLRDALKNANTCPTCRKKINHKRYHPIYI 195
>UNIPROTKB|F1PC91 [details] [associations]
symbol:RNF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000010318
EMBL:AAEX03002450 EMBL:AAEX03002451 Ensembl:ENSCAFT00000036593
Uniprot:F1PC91
Length = 189
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 36/111 (32%), Positives = 53/111 (47%)
Query: 121 RRNRPDEATPDNCCINVDTSNNNKN-DA-APLQLPQDPMAAA-----P--TFSCPICMGP 171
RR R D A D+C ++ D +++ D P++ A P T SCPICM
Sbjct: 81 RRPRQDHA--DSCVVSSDDEELSRDRDVYVTTHTPRNTREEAATGLRPSGTVSCPICMDG 138
Query: 172 LSEAT-------STKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRVY 215
SE ST+CGH+FC C++ A+ CP CR+K+ + +Y
Sbjct: 139 YSEIVQNGRLIVSTECGHVFCSQCLRDALKNANTCPTCRKKINHKRYHPIY 189
>UNIPROTKB|F1NLH3 [details] [associations]
symbol:RNF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0090169 "regulation of spindle assembly"
evidence=IEA] [GO:0090234 "regulation of kinetochore assembly"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0005634 GO:GO:0043161
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 OMA:THRQYHP GO:GO:0090234 GO:GO:0090169
GeneTree:ENSGT00390000010318 EMBL:AADN02014962 IPI:IPI00683734
Ensembl:ENSGALT00000032038 Uniprot:F1NLH3
Length = 196
Score = 139 (54.0 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 32/100 (32%), Positives = 48/100 (48%)
Query: 126 DEATPDNCCINVDTSNNNKNDAAPLQLPQDPMAAAP--TFSCPICMGPLSEAT------- 176
++ T DN +V ++ + PL+ P T SCPICM SE
Sbjct: 100 EDETRDN---DVYVTDKVSRELGPLEDETASSNTRPSGTVSCPICMDGYSEIVQSGRLIV 156
Query: 177 STKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRVYL 216
STKCGH+FC C++ ++ CP CR+K+ R +Y+
Sbjct: 157 STKCGHVFCSQCLRDSLRNANSCPTCRKKLTHRQYHPIYI 196
>RGD|3583 [details] [associations]
symbol:Rnf4 "ring finger protein 4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=IMP] [GO:0016605 "PML body"
evidence=ISO;IDA] [GO:0017025 "TBP-class protein binding"
evidence=TAS] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0031491 "nucleosome binding" evidence=IDA] [GO:0032184 "SUMO
polymer binding" evidence=IPI] [GO:0033142 "progesterone receptor
binding" evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS;IDA] [GO:0046685 "response to
arsenic-containing substance" evidence=ISO;IDA] [GO:0050681 "androgen
receptor binding" evidence=IPI] [GO:0051865 "protein
autoubiquitination" evidence=IMP] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IDA] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IDA] [GO:0070979 "protein K11-linked
ubiquitination" evidence=IDA] [GO:0085020 "protein K6-linked
ubiquitination" evidence=IDA] [GO:0090169 "regulation of spindle
assembly" evidence=ISO;ISS] [GO:0090234 "regulation of kinetochore
assembly" evidence=ISO;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 RGD:3583
Prosite:PS00518 GO:GO:0005737 GO:GO:0005654 GO:GO:0043161
GO:GO:0046685 GO:GO:0046872 GO:GO:0003677 GO:GO:0016605 GO:GO:0008270
GO:GO:0045944 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0070979 GO:GO:0030331 InterPro:IPR017907
GO:GO:0070936 GO:GO:0070534 GO:GO:0031491 GO:GO:0051865 GO:GO:0085020
GO:GO:0017025 CTD:6047 eggNOG:NOG327779 HOGENOM:HOG000059548
HOVERGEN:HBG018577 OrthoDB:EOG4S4PHN GO:GO:0090234 GO:GO:0090169
GeneTree:ENSGT00390000010318 EMBL:AF022081 EMBL:AY050655
EMBL:BC062024 IPI:IPI00213362 RefSeq:NP_062055.1 UniGene:Rn.30015
PDB:3NG2 PDB:4AP4 PDBsum:3NG2 PDBsum:4AP4 ProteinModelPortal:O88846
SMR:O88846 STRING:O88846 PhosphoSite:O88846 PRIDE:O88846
Ensembl:ENSRNOT00000019555 GeneID:29274 KEGG:rno:29274
InParanoid:O88846 EvolutionaryTrace:O88846 NextBio:608631
Genevestigator:O88846 GermOnline:ENSRNOG00000013930 Uniprot:O88846
Length = 194
Score = 138 (53.6 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 34/112 (30%), Positives = 53/112 (47%)
Query: 121 RRNRPDEATPDNCCINVDTSNNNKN-DA-APLQLPQDP-------MAAAPTFSCPICMGP 171
RR R D A D+C ++ D +K+ D P+ + + T SCPICM
Sbjct: 85 RRLRQDHA--DSCVVSSDDEELSKDKDVYVTTHTPRSTKDEGTTGLRPSGTVSCPICMDG 142
Query: 172 LSEAT-------STKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRVYL 216
SE ST+CGH+FC C++ ++ CP CR+K+ + +Y+
Sbjct: 143 YSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIYI 194
>ZFIN|ZDB-GENE-041008-246 [details] [associations]
symbol:im:7142942 "im:7142942" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-041008-246 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00390000010318 EMBL:BX004830
IPI:IPI00613625 RefSeq:XP_001331980.1 RefSeq:XP_683428.1
UniGene:Dr.107727 Ensembl:ENSDART00000123145 GeneID:557319
KEGG:dre:557319 NextBio:20881936 Uniprot:E7EXS0
Length = 184
Score = 133 (51.9 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 41/148 (27%), Positives = 64/148 (43%)
Query: 81 NSRRNHSQVVDQLRHVLTDAGGLLDSLQEVTDLAILYVKQRRNRPDEATPDNCCINVDTS 140
N R N VVD LT G + + +I+ V+ R ++ ++ D
Sbjct: 42 NDRTNSEDVVD-----LTCEGSEPAVVDLTNNDSIVVVEDGVQRRVGPCTESYVLSSDEE 96
Query: 141 NNNKNDAAP--LQLPQDPMAAAPT---FSCPICMGPLSEA-------TSTKCGHIFCKDC 188
+ +P L +D A T SCP+CM SE STKCGH+FC C
Sbjct: 97 EESSLRLSPGLLSSLRDSSRARSTPGAISCPVCMDVYSEIMDSGRLMVSTKCGHLFCSQC 156
Query: 189 IKGAIAAQGKCPNCRQKVGKRGIFRVYL 216
I+ +++ CP CR+K+ + +Y+
Sbjct: 157 IRDSLSRAHSCPTCRKKLTHKQYHPIYI 184
>UNIPROTKB|H0YAI5 [details] [associations]
symbol:RNF4 "E3 ubiquitin-protein ligase RNF4" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL110117 EMBL:AL645924
EMBL:BX322586 EMBL:CR450722 EMBL:CR545473 HGNC:HGNC:10067
ChiTaRS:RNF4 Ensembl:ENST00000508235 Uniprot:H0YAI5
Length = 106
Score = 128 (50.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 162 TFSCPICMGPLSEAT-------STKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRV 214
T SCPICM SE ST+CGH+FC C++ ++ CP CR+K+ + + V
Sbjct: 45 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRLLLV 104
>UNIPROTKB|F5H1U2 [details] [associations]
symbol:RNF4 "E3 ubiquitin-protein ligase RNF4" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0015630 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AL110117 EMBL:AL645924 EMBL:BX322586 EMBL:CR450722
EMBL:CR545473 HGNC:HGNC:10067 ChiTaRS:RNF4 IPI:IPI01012670
ProteinModelPortal:F5H1U2 SMR:F5H1U2 Ensembl:ENST00000541204
PhylomeDB:F5H1U2 ArrayExpress:F5H1U2 Bgee:F5H1U2 Uniprot:F5H1U2
Length = 190
Score = 132 (51.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 162 TFSCPICMGPLSEAT-------STKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRV 214
T SCPICM SE ST+CGH+FC C++ ++ CP CR+K+ + +
Sbjct: 129 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPI 188
Query: 215 YL 216
Y+
Sbjct: 189 YI 190
>UNIPROTKB|P78317 [details] [associations]
symbol:RNF4 "E3 ubiquitin-protein ligase RNF4" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0033142
"progesterone receptor binding" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=NAS] [GO:0050681
"androgen receptor binding" evidence=NAS] [GO:0030521 "androgen
receptor signaling pathway" evidence=NAS] [GO:0090234 "regulation
of kinetochore assembly" evidence=IMP] [GO:0090169 "regulation of
spindle assembly" evidence=IMP] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0051865 "protein autoubiquitination"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] [GO:0070936 "protein K48-linked ubiquitination"
evidence=ISS] [GO:0070979 "protein K11-linked ubiquitination"
evidence=ISS] [GO:0085020 "protein K6-linked ubiquitination"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0031491
"nucleosome binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0032184 "SUMO polymer binding" evidence=ISS] [GO:0016605 "PML
body" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 Reactome:REACT_6900
GO:GO:0030521 GO:GO:0043161 GO:GO:0015630 GO:GO:0046685
GO:GO:0046872 GO:GO:0003677 GO:GO:0016605 GO:GO:0008270
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0003713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0070979
GO:GO:0050681 InterPro:IPR017907 GO:GO:0070936 GO:GO:0070534
GO:GO:0031491 GO:GO:0051865 GO:GO:0085020 GO:GO:0032184
EMBL:AL110117 EMBL:AL645924 EMBL:AB000468 EMBL:U95140 EMBL:AK128038
EMBL:AK309509 EMBL:AK312534 EMBL:BX322586 EMBL:CR450722
EMBL:CR545473 EMBL:BC031935 IPI:IPI00297694 IPI:IPI00965645
RefSeq:NP_001171938.1 RefSeq:NP_001171939.1 RefSeq:NP_002929.1
UniGene:Hs.740360 PDB:2EA6 PDB:2XEU PDBsum:2EA6 PDBsum:2XEU
ProteinModelPortal:P78317 SMR:P78317 IntAct:P78317 MINT:MINT-271054
STRING:P78317 PhosphoSite:P78317 DMDM:18202358 PRIDE:P78317
DNASU:6047 Ensembl:ENST00000314289 Ensembl:ENST00000506706
Ensembl:ENST00000511600 Ensembl:ENST00000511859 GeneID:6047
KEGG:hsa:6047 UCSC:uc003gfb.3 CTD:6047 GeneCards:GC04P002463
HGNC:HGNC:10067 HPA:HPA049356 MIM:602850 neXtProt:NX_P78317
PharmGKB:PA34439 eggNOG:NOG327779 HOGENOM:HOG000059548
HOVERGEN:HBG018577 InParanoid:P78317 OMA:THRQYHP OrthoDB:EOG4S4PHN
ChiTaRS:RNF4 EvolutionaryTrace:P78317 GenomeRNAi:6047 NextBio:23561
ArrayExpress:P78317 Bgee:P78317 CleanEx:HS_RNF4
Genevestigator:P78317 GermOnline:ENSG00000063978 GO:GO:0090234
GO:GO:0090169 Uniprot:P78317
Length = 190
Score = 132 (51.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 162 TFSCPICMGPLSEAT-------STKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRV 214
T SCPICM SE ST+CGH+FC C++ ++ CP CR+K+ + +
Sbjct: 129 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPI 188
Query: 215 YL 216
Y+
Sbjct: 189 YI 190
>UNIPROTKB|H0Y340 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2
Ensembl:ENST00000367667 Uniprot:H0Y340
Length = 113
Score = 119 (46.9 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKV 206
F CPIC + EA TKCGH FC CI ++ +CP C V
Sbjct: 39 FVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVV 82
>UNIPROTKB|D6RA71 [details] [associations]
symbol:RNF4 "E3 ubiquitin-protein ligase RNF4" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0030331 "estrogen receptor binding" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0032184 "SUMO
polymer binding" evidence=IEA] [GO:0033142 "progesterone receptor
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046685 "response
to arsenic-containing substance" evidence=IEA] [GO:0050681
"androgen receptor binding" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IEA] [GO:0070979 "protein K11-linked
ubiquitination" evidence=IEA] [GO:0085020 "protein K6-linked
ubiquitination" evidence=IEA] [GO:0015630 "microtubule
cytoskeleton" evidence=IDA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0015630
GO:GO:0046685 GO:GO:0046872 GO:GO:0003677 GO:GO:0016605
GO:GO:0008270 GO:GO:0045944 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0070979 InterPro:IPR017907 GO:GO:0070936
GO:GO:0070534 GO:GO:0031491 GO:GO:0051865 GO:GO:0085020
EMBL:AL110117 EMBL:AL645924 EMBL:BX322586 EMBL:CR450722
EMBL:CR545473 HGNC:HGNC:10067 HOGENOM:HOG000059548 ChiTaRS:RNF4
IPI:IPI00967026 ProteinModelPortal:D6RA71 SMR:D6RA71
Ensembl:ENST00000502316 ArrayExpress:D6RA71 Bgee:D6RA71
Uniprot:D6RA71
Length = 188
Score = 126 (49.4 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 162 TFSCPICMGPLSEAT-------STKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKR 209
T SCPICM SE ST+CGH+FC C++ ++ CP CR+K+ +
Sbjct: 129 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHK 183
>RGD|1306757 [details] [associations]
symbol:Rnf125 "ring finger protein 125" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 RGD:1306757 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 EMBL:CH473974
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946 CTD:54941
eggNOG:NOG46770 HOVERGEN:HBG098958 KO:K12170 OMA:RTRCGHV
OrthoDB:EOG4SJ5FM EMBL:BC162061 IPI:IPI00870006
RefSeq:NP_001101894.1 UniGene:Rn.163367 STRING:B1WCA3
Ensembl:ENSRNOT00000021136 GeneID:361296 KEGG:rno:361296
NextBio:675857 Genevestigator:B1WCA3 Uniprot:B1WCA3
Length = 233
Score = 128 (50.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 135 INVDTSNNNKNDAA--PLQLPQDPMAAAPTFSCPICMGPLSEATSTKCGHIFCKDCIKGA 192
++ D+S + +A L+ DP +F C +C+ L + T+CGH+FC+ CI +
Sbjct: 5 LSSDSSKSAPTSSARRTLERSGDPELPITSFDCSVCLEVLHQPVRTRCGHVFCRSCIATS 64
Query: 193 IAAQGK--CPNCRQKVGKRGI 211
I K CP CR + G+
Sbjct: 65 IKNNNKWTCPYCRAYLPSEGV 85
>MGI|MGI:1914914 [details] [associations]
symbol:Rnf125 "ring finger protein 125" species:10090 "Mus
musculus" [GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR015880
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
UniPathway:UPA00143 MGI:MGI:1914914 Prosite:PS00518 GO:GO:0005829
GO:GO:0046872 GO:GO:0008270 Reactome:REACT_107772 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946 CTD:54941
eggNOG:NOG46770 HOVERGEN:HBG098958 KO:K12170 OrthoDB:EOG4SJ5FM
EMBL:AK006569 EMBL:AK050395 EMBL:AC138611 EMBL:BC094290
EMBL:BC116883 EMBL:BC116887 IPI:IPI00137236 IPI:IPI00269061
RefSeq:NP_080577.1 UniGene:Mm.45980 ProteinModelPortal:Q9D9R0
SMR:Q9D9R0 STRING:Q9D9R0 PhosphoSite:Q9D9R0 PRIDE:Q9D9R0
Ensembl:ENSMUST00000050004 GeneID:67664 KEGG:mmu:67664
UCSC:uc008eez.1 UCSC:uc008efa.1 InParanoid:Q0VG32 OMA:VPNENAN
ChiTaRS:RNF125 NextBio:325181 Bgee:Q9D9R0 CleanEx:MM_RNF125
Genevestigator:Q9D9R0 GermOnline:ENSMUSG00000033107 Uniprot:Q9D9R0
Length = 233
Score = 127 (49.8 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 135 INVDTSNNNKNDAAPLQLPQDPMAAAP--TFSCPICMGPLSEATSTKCGHIFCKDCIKGA 192
++ D+S + A P L + + P +F C +C+ L + T+CGH+FC+ CI +
Sbjct: 5 LSSDSSKSAPASATPRTLERSGDSELPITSFDCSVCLEVLHQPVRTRCGHVFCRSCIATS 64
Query: 193 IAAQGK--CPNCRQKVGKRGI 211
I K CP CR + G+
Sbjct: 65 IKNNNKWTCPYCRAYLPSEGV 85
>UNIPROTKB|K7GL56 [details] [associations]
symbol:LOC100517591 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00530000063064 EMBL:CU019565
Ensembl:ENSSSCT00000035939 Uniprot:K7GL56
Length = 206
Score = 124 (48.7 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 26/82 (31%), Positives = 42/82 (51%)
Query: 136 NVDTSNNNKN---DAAPLQLPQ--DPMAAAPTFSCPICMGPLSEATSTKCGHIFCKDCIK 190
+V +S+N K+ A P L + DP +F C +C+ L T+CGH+FC+ CI
Sbjct: 3 SVLSSDNGKSAPASATPRALERRGDPALPVTSFDCSVCLEVLHHPVRTRCGHVFCRSCIA 62
Query: 191 GAIAA-QGKCPNCRQKVGKRGI 211
++ + CP CR + G+
Sbjct: 63 TSLKNNKWTCPYCRAYLPSEGV 84
>UNIPROTKB|H0YH05 [details] [associations]
symbol:RNF10 "RING finger protein 10" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC063943 HGNC:HGNC:10055
ChiTaRS:RNF10 Ensembl:ENST00000541955 Uniprot:H0YH05
Length = 129
Score = 110 (43.8 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 22/52 (42%), Positives = 29/52 (55%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQ----GKCPNCRQKVGKRGI 211
SCPIC+ P + A T+CGHIFC CI ++ KCP C V K+ +
Sbjct: 17 SCPICLYPPTAAKITRCGHIFCWACILHYLSLSEKTWSKCPICYSSVHKKDL 68
>MGI|MGI:1914754 [details] [associations]
symbol:Rnf151 "ring finger protein 151" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS51081
SMART:SM00184 MGI:MGI:1914754 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0046872 GO:GO:0008270
GO:GO:0007283 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
HSSP:Q9H0F5 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
CTD:146310 eggNOG:NOG319521 GeneTree:ENSGT00530000063647
HOGENOM:HOG000154154 HOVERGEN:HBG087956 OMA:PCCRKEV
OrthoDB:EOG4V6ZHF EMBL:AK005854 EMBL:BC049562 IPI:IPI00131917
RefSeq:NP_080481.1 UniGene:Mm.46159 ProteinModelPortal:Q9CQ29
SMR:Q9CQ29 STRING:Q9CQ29 PhosphoSite:Q9CQ29 PRIDE:Q9CQ29
Ensembl:ENSMUST00000008626 GeneID:67504 KEGG:mmu:67504
UCSC:uc008axw.1 InParanoid:Q9CQ29 NextBio:324764 Bgee:Q9CQ29
CleanEx:MM_RNF151 Genevestigator:Q9CQ29
GermOnline:ENSMUSG00000008482 Uniprot:Q9CQ29
Length = 239
Score = 125 (49.1 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRV 214
F C +C G L T C HIFCK CI +A Q CP CR++V +R + V
Sbjct: 18 FLCSVCHGVLKRPTRLPCSHIFCKKCIFRWLARQNTCPCCRKEVTRRKMVEV 69
>UNIPROTKB|F1SAL7 [details] [associations]
symbol:LOC100517591 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GeneTree:ENSGT00530000063064
KO:K12170 OMA:RTRCGHV EMBL:CU019565 RefSeq:XP_003127936.2
Ensembl:ENSSSCT00000004129 GeneID:100517591 KEGG:ssc:100517591
Uniprot:F1SAL7
Length = 232
Score = 124 (48.7 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 26/82 (31%), Positives = 42/82 (51%)
Query: 136 NVDTSNNNKN---DAAPLQLPQ--DPMAAAPTFSCPICMGPLSEATSTKCGHIFCKDCIK 190
+V +S+N K+ A P L + DP +F C +C+ L T+CGH+FC+ CI
Sbjct: 3 SVLSSDNGKSAPASATPRALERRGDPALPVTSFDCSVCLEVLHHPVRTRCGHVFCRSCIA 62
Query: 191 GAIAA-QGKCPNCRQKVGKRGI 211
++ + CP CR + G+
Sbjct: 63 TSLKNNKWTCPYCRAYLPSEGV 84
>UNIPROTKB|Q96EQ8 [details] [associations]
symbol:RNF125 "E3 ubiquitin-protein ligase RNF125"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0032480 "negative regulation of type I interferon production"
evidence=TAS] [GO:0045087 "innate immune response" evidence=TAS]
InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 UniPathway:UPA00143 Prosite:PS00518
Reactome:REACT_6900 GO:GO:0046872 GO:GO:0008270 GO:GO:0045087
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0032480 HOGENOM:HOG000230946 EMBL:AK000463
EMBL:BC012021 IPI:IPI00410652 RefSeq:NP_060301.2 UniGene:Hs.633703
ProteinModelPortal:Q96EQ8 SMR:Q96EQ8 IntAct:Q96EQ8 STRING:Q96EQ8
PhosphoSite:Q96EQ8 DMDM:143811449 PRIDE:Q96EQ8
Ensembl:ENST00000217740 GeneID:54941 KEGG:hsa:54941 UCSC:uc002kxf.1
CTD:54941 GeneCards:GC18P029598 H-InvDB:HIX0014384 HGNC:HGNC:21150
HPA:HPA041514 MIM:610432 neXtProt:NX_Q96EQ8 PharmGKB:PA134950383
eggNOG:NOG46770 HOVERGEN:HBG098958 InParanoid:Q96EQ8 KO:K12170
OMA:RTRCGHV OrthoDB:EOG4SJ5FM PhylomeDB:Q96EQ8 GenomeRNAi:54941
NextBio:58082 Bgee:Q96EQ8 CleanEx:HS_RNF125 Genevestigator:Q96EQ8
GermOnline:ENSG00000101695 Uniprot:Q96EQ8
Length = 232
Score = 123 (48.4 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 147 AAPLQLPQDPMAAAPTFSCPICMGPLSEATSTKCGHIFCKDCIKGAIAA-QGKCPNCRQK 205
A L+ +DP +F C +C+ L + T+CGH+FC+ CI ++ + CP CR
Sbjct: 19 ARALERRRDPELPVTSFDCAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCPYCRAY 78
Query: 206 VGKRGI 211
+ G+
Sbjct: 79 LPSEGV 84
>ZFIN|ZDB-GENE-041010-71 [details] [associations]
symbol:pex10 "peroxisome biogenesis factor 10"
species:7955 "Danio rerio" [GO:0016558 "protein import into
peroxisome matrix" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005779 "integral to peroxisomal membrane"
evidence=IEA] [GO:0007031 "peroxisome organization" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184 InterPro:IPR006845
Prosite:PS00518 ZFIN:ZDB-GENE-041010-71 GO:GO:0046872 GO:GO:0008270
GO:GO:0005779 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558
InterPro:IPR017907 eggNOG:COG5574 KO:K13346 OMA:FRQRQRA
PANTHER:PTHR23350 Pfam:PF04757 CTD:5192 HOGENOM:HOG000180194
HOVERGEN:HBG053568 GeneTree:ENSGT00510000048446 OrthoDB:EOG4TB4C1
EMBL:CU570796 EMBL:BC083412 IPI:IPI00504298 RefSeq:NP_001005994.1
UniGene:Dr.91787 STRING:Q5XJ92 Ensembl:ENSDART00000060853
GeneID:449821 KEGG:dre:449821 InParanoid:Q5XJ92 NextBio:20832893
Uniprot:Q5XJ92
Length = 318
Score = 109 (43.4 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 154 QDPMAAAPTFSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQK 205
Q +++ T C +C+ TST CGH+FC +CI + +CP CR+K
Sbjct: 254 QVSQSSSRTSRCILCLEERRNTTSTPCGHLFCWECITEWCNTKNECPLCREK 305
Score = 53 (23.7 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 62 VIDDDLAIINQRIFAEAKNNSRRNHSQVVDQLRHVLTDAGGLLDSLQEVTDLAILYVKQR 121
++D L + + AEA N+RR + + +R + A GLL Q + + +++ Q+
Sbjct: 105 LLDKVLICVENELEAEAPQNTRRTWNPL-SHMRFWIQRAVGLLTESQRKSLIPLVFALQQ 163
>UNIPROTKB|H7C5V9 [details] [associations]
symbol:LONRF1 "LON peptidase N-terminal domain and RING
finger protein 1" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003111 Pfam:PF02190
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
EMBL:AC123777 HGNC:HGNC:26302 Ensembl:ENST00000524526 Bgee:H7C5V9
Uniprot:H7C5V9
Length = 376
Score = 126 (49.4 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 28/105 (26%), Positives = 49/105 (46%)
Query: 105 DSLQEVTDLAILYVKQRR---NRPDEATPDNCCINVDTSNNNKNDAAPLQLPQDPMAAAP 161
D L+ V+ +L V+++ R + +N D N K A +P++ +
Sbjct: 20 DCLKRVSSEPVLSVQEKGVLLKRKLSLLEQDVIVNEDGRNKLKKQGAYGDIPEE-LIDVS 78
Query: 162 TFSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKV 206
F C +CM E +T CGH FCK+C++ + CP C++ +
Sbjct: 79 DFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPYCPLCKESL 123
>DICTYBASE|DDB_G0273535 [details] [associations]
symbol:mip1-2 "MEK1 interacting protein 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0273535 dictyBase:DDB_G0273399 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GenomeReviews:CM000151_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AAFI02000010
InterPro:IPR017907 eggNOG:NOG327779 RefSeq:XP_644602.1
RefSeq:XP_644649.1 ProteinModelPortal:Q557I6
EnsemblProtists:DDB0191344 EnsemblProtists:DDB0238528
GeneID:8618966 GeneID:8619011 KEGG:ddi:DDB_G0273399
KEGG:ddi:DDB_G0273535 InParanoid:Q557I6 ProtClustDB:CLSZ2431236
Uniprot:Q557I6
Length = 552
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 23/53 (43%), Positives = 29/53 (54%)
Query: 165 CPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKV-GKRGIFRVYL 216
CPIC ST CGHIFC DCI A+ + CP C K+ GK+ +Y+
Sbjct: 500 CPICFEDTKPYVSTLCGHIFCSDCIVNALKKKKSCPVCNAKLHGKKPYHPIYI 552
>DICTYBASE|DDB_G0273399 [details] [associations]
symbol:mip1-1 "MEK1 interacting protein 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0273535 dictyBase:DDB_G0273399 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GenomeReviews:CM000151_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AAFI02000010
InterPro:IPR017907 eggNOG:NOG327779 RefSeq:XP_644602.1
RefSeq:XP_644649.1 ProteinModelPortal:Q557I6
EnsemblProtists:DDB0191344 EnsemblProtists:DDB0238528
GeneID:8618966 GeneID:8619011 KEGG:ddi:DDB_G0273399
KEGG:ddi:DDB_G0273535 InParanoid:Q557I6 ProtClustDB:CLSZ2431236
Uniprot:Q557I6
Length = 552
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 23/53 (43%), Positives = 29/53 (54%)
Query: 165 CPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKV-GKRGIFRVYL 216
CPIC ST CGHIFC DCI A+ + CP C K+ GK+ +Y+
Sbjct: 500 CPICFEDTKPYVSTLCGHIFCSDCIVNALKKKKSCPVCNAKLHGKKPYHPIYI 552
>UNIPROTKB|E1BJY5 [details] [associations]
symbol:RNF125 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GeneTree:ENSGT00530000063064 CTD:54941 KO:K12170
OMA:RTRCGHV EMBL:DAAA02056451 IPI:IPI00717546 RefSeq:NP_001192788.1
UniGene:Bt.51849 ProteinModelPortal:E1BJY5
Ensembl:ENSBTAT00000004048 GeneID:519541 KEGG:bta:519541
NextBio:20872894 Uniprot:E1BJY5
Length = 232
Score = 121 (47.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 23/80 (28%), Positives = 39/80 (48%)
Query: 135 INVDTSNNNKNDAAPLQLPQ--DPMAAAPTFSCPICMGPLSEATSTKCGHIFCKDCIKGA 192
++ D+ + A P L + DP +F C +C+ L T+CGH+FC+ CI +
Sbjct: 5 LSSDSGKSAPASATPRALERRGDPELPVTSFDCSVCLEVLHHPVRTRCGHVFCRSCIATS 64
Query: 193 IAA-QGKCPNCRQKVGKRGI 211
+ + CP CR + G+
Sbjct: 65 LKNNKWTCPYCRAYLPSEGV 84
>UNIPROTKB|J9PBI0 [details] [associations]
symbol:RNF125 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
Prosite:PS00518 Pfam:PF05605 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR008598 GeneTree:ENSGT00530000063064
CTD:54941 KO:K12170 OMA:RTRCGHV EMBL:AAEX03005423
RefSeq:XP_547620.3 Ensembl:ENSCAFT00000044835 GeneID:490498
KEGG:cfa:490498 Uniprot:J9PBI0
Length = 232
Score = 121 (47.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 23/80 (28%), Positives = 40/80 (50%)
Query: 135 INVDTSNNNKNDAAPLQLPQ--DPMAAAPTFSCPICMGPLSEATSTKCGHIFCKDCIKGA 192
++ D++ AP L + DP +F C +C+ L + T+CGH+FC+ CI +
Sbjct: 5 LSSDSAKAAPASGAPRALERSGDPELPVTSFDCSVCLEVLHQPVRTRCGHVFCRSCIATS 64
Query: 193 IAA-QGKCPNCRQKVGKRGI 211
+ + CP CR + G+
Sbjct: 65 LKNNRWTCPYCRAYLPSEGV 84
>UNIPROTKB|H3BPQ8 [details] [associations]
symbol:BFAR "Bifunctional apoptosis regulator" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HGNC:HGNC:17613 EMBL:AC009167
ProteinModelPortal:H3BPQ8 SMR:H3BPQ8 Ensembl:ENST00000563313
Bgee:H3BPQ8 Uniprot:H3BPQ8
Length = 89
Score = 105 (42.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 137 VDTSNNNKNDAAPLQLPQDPMAAAPTFSCPICMGPLSEATSTKCGHIFCKDCIK--GAIA 194
V+T + +++ PL+ P + FSC C L T+ CGH FC+ C+ A +
Sbjct: 9 VNTMDLERDE--PLK-STGPQISVSEFSCHCCYDILVNPTTLNCGHSFCRHCLALWWASS 65
Query: 195 AQGKCPNCRQK 205
+ +CP CR+K
Sbjct: 66 KKTECPECREK 76
>UNIPROTKB|H3BRQ5 [details] [associations]
symbol:BFAR "Bifunctional apoptosis regulator" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HGNC:HGNC:17613 EMBL:AC009167
Ensembl:ENST00000570219 Bgee:H3BRQ5 Uniprot:H3BRQ5
Length = 109
Score = 105 (42.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 137 VDTSNNNKNDAAPLQLPQDPMAAAPTFSCPICMGPLSEATSTKCGHIFCKDCIK--GAIA 194
V+T + +++ PL+ P + FSC C L T+ CGH FC+ C+ A +
Sbjct: 9 VNTMDLERDE--PLK-STGPQISVSEFSCHCCYDILVNPTTLNCGHSFCRHCLALWWASS 65
Query: 195 AQGKCPNCRQK 205
+ +CP CR+K
Sbjct: 66 KKTECPECREK 76
>UNIPROTKB|H3BUB3 [details] [associations]
symbol:BFAR "Bifunctional apoptosis regulator" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HGNC:HGNC:17613 EMBL:AC009167
ProteinModelPortal:H3BUB3 SMR:H3BUB3 Ensembl:ENST00000566710
Bgee:H3BUB3 Uniprot:H3BUB3
Length = 141
Score = 105 (42.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 137 VDTSNNNKNDAAPLQLPQDPMAAAPTFSCPICMGPLSEATSTKCGHIFCKDCIK--GAIA 194
V+T + +++ PL+ P + FSC C L T+ CGH FC+ C+ A +
Sbjct: 9 VNTMDLERDE--PLK-STGPQISVSEFSCHCCYDILVNPTTLNCGHSFCRHCLALWWASS 65
Query: 195 AQGKCPNCRQK 205
+ +CP CR+K
Sbjct: 66 KKTECPECREK 76
>UNIPROTKB|D6RAL3 [details] [associations]
symbol:SH3RF1 "E3 ubiquitin-protein ligase SH3RF1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005078 "MAP-kinase scaffold activity"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0046328 "regulation
of JNK cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0006917 GO:GO:0046872
GO:GO:0008270 GO:GO:0030027 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0046328 InterPro:IPR017907 EMBL:AC021151 HGNC:HGNC:17650
ChiTaRS:SH3RF1 EMBL:AC096741 EMBL:AC104783 IPI:IPI00967311
ProteinModelPortal:D6RAL3 SMR:D6RAL3 Ensembl:ENST00000510806
ArrayExpress:D6RAL3 Bgee:D6RAL3 Uniprot:D6RAL3
Length = 79
Score = 104 (41.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 155 DPMAAAPTFSCPICMGPL-SEATSTKCGHIFCKDCIKGAIAAQG--KCPNCRQKVG 207
D A CP+C+ L + A C H FCK C+ G + ++ +CP CR VG
Sbjct: 2 DESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRTLVG 57
>UNIPROTKB|D6RHX5 [details] [associations]
symbol:SH3RF1 "E3 ubiquitin-protein ligase SH3RF1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005078 "MAP-kinase scaffold activity"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0046328 "regulation
of JNK cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0006917 GO:GO:0046872
GO:GO:0008270 GO:GO:0030027 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0046328 InterPro:IPR017907 EMBL:AC021151 HGNC:HGNC:17650
ChiTaRS:SH3RF1 EMBL:AC096741 EMBL:AC104783 IPI:IPI00966916
ProteinModelPortal:D6RHX5 SMR:D6RHX5 Ensembl:ENST00000502315
ArrayExpress:D6RHX5 Bgee:D6RHX5 Uniprot:D6RHX5
Length = 99
Score = 104 (41.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 155 DPMAAAPTFSCPICMGPL-SEATSTKCGHIFCKDCIKGAIAAQG--KCPNCRQKVG 207
D A CP+C+ L + A C H FCK C+ G + ++ +CP CR VG
Sbjct: 2 DESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRTLVG 57
>RGD|1309302 [details] [associations]
symbol:Rnf151 "ring finger protein 151" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR008974 InterPro:IPR013010
InterPro:IPR013323 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS51081 SMART:SM00184 RGD:1309302 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 EMBL:CH473948 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 CTD:146310
GeneTree:ENSGT00530000063647 OrthoDB:EOG4V6ZHF IPI:IPI00368706
RefSeq:NP_001100457.1 UniGene:Rn.89276 Ensembl:ENSRNOT00000018964
GeneID:302977 KEGG:rno:302977 UCSC:RGD:1309302 NextBio:650458
Uniprot:D3ZJQ8
Length = 238
Score = 120 (47.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 22/52 (42%), Positives = 29/52 (55%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRV 214
F C +C G L C HIFCK CI +A Q CP CR++V +R + +V
Sbjct: 18 FLCSVCHGVLKRPMRLPCSHIFCKKCIFQWLARQNTCPCCRKEVKRRKMVQV 69
>DICTYBASE|DDB_G0285333 [details] [associations]
symbol:DDB_G0285333 "RING finger protein 185"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0285333 Prosite:PS00518 GO:GO:0046872
EMBL:AAFI02000079 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:COG5574 KO:K10666
RefSeq:XP_638242.1 ProteinModelPortal:Q54ND8
EnsemblProtists:DDB0186444 GeneID:8625050 KEGG:ddi:DDB_G0285333
InParanoid:Q54ND8 OMA:CIFQWLQ Uniprot:Q54ND8
Length = 281
Score = 121 (47.7 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 28/99 (28%), Positives = 46/99 (46%)
Query: 123 NRPDEATPDNCCINVDTSNNN----KNDAAPLQLPQDPMAAAPTFSCPICMGPLSEATST 178
N + T +SNNN ++ ++ Q Q ++P F C IC +SE T
Sbjct: 28 NLNNRTTTTTTTTTTSSSNNNDGSEQSSSSQQQQQQQQQQSSP-FECNICFDDVSEPVVT 86
Query: 179 KCGHIFCKDCIKGAIA--AQGKCPNCRQKVGKRGIFRVY 215
+CGH+FC CI + + +CP C+ + K + +Y
Sbjct: 87 QCGHLFCWTCIFQWLQHNSSQQCPVCKAPITKEKLIPIY 125
>ZFIN|ZDB-GENE-030131-5958 [details] [associations]
symbol:wu:fi27d05 "wu:fi27d05" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-030131-5958 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00440000035370 EMBL:CR407597 IPI:IPI00489836
Ensembl:ENSDART00000112597 Bgee:E7FBY1 Uniprot:E7FBY1
Length = 1006
Score = 127 (49.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 158 AAAPTFSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGK-CPNCRQKVGK 208
AAA C ICM ++ KCGH FC+DC+K ++ + G CP C++ GK
Sbjct: 820 AAAEEDKCVICMDSFTDKEKLKCGHEFCRDCLKQSVESMGSICPVCKEVFGK 871
Score = 41 (19.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 22/109 (20%), Positives = 49/109 (44%)
Query: 37 IATNSQEYPF-DGHSDSRGDIGDCVEVIDD---DLAIINQRIFAEAKNNSRRNHSQVVDQ 92
I+ N+ E P D S + + + V+ D + + + A+ N+ + +
Sbjct: 486 ISVNATENPRPDSVSKATDEFEELVQGCMSSFSDATVHHNDMDADIVKNAIDSIKSQKTK 545
Query: 93 LRHVLTDAGGLLDSLQEVTDLAILYVKQRRNRPD-EATPDNCCINVDTS 140
L LTD+ GL ++ TD+ +K+ R + ++ + +N+D++
Sbjct: 546 LMFTLTDSDGLFLGPKKFTDM----IKEETRRGEGQSNSRSIPMNIDSN 590
>POMBASE|SPBC3D6.11c [details] [associations]
symbol:slx8 "SUMO-targeted ubiquitin-protein ligase E3
Slx8 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0000077 "DNA damage checkpoint" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006310 "DNA recombination" evidence=IGI] [GO:0008270 "zinc ion
binding" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0033234 "negative regulation of protein
sumoylation" evidence=IMP] [GO:0033768 "SUMO-targeted ubiquitin
ligase complex" evidence=IPI] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 PomBase:SPBC3D6.11c
Prosite:PS00518 GO:GO:0000077 GO:GO:0046872 EMBL:CU329671
GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0006310
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0033234 eggNOG:COG5574 GO:GO:0033768
EMBL:AB028016 PIR:T40371 RefSeq:NP_595523.1
ProteinModelPortal:P87176 MINT:MINT-4784040 STRING:P87176
EnsemblFungi:SPBC3D6.11c.1 GeneID:2540618 KEGG:spo:SPBC3D6.11c
OrthoDB:EOG44N22N NextBio:20801743 Uniprot:P87176
Length = 269
Score = 120 (47.3 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 41/164 (25%), Positives = 64/164 (39%)
Query: 47 DGHSDSRGDIGDCVEV-IDDDLAIINQRIFAEAKNNSRRNHSQVVDQLRHVLTDAGGLLD 105
D + D ++ D ++ +D INQR S N V+ + T ++D
Sbjct: 98 DLNIDVESEVFDLEDINFQNDADDINQRFTYNNHPASVENSLTNVNSIHAQPTTISDMID 157
Query: 106 SLQEVTDLAILYVKQRRNRPDEATPDNCCINVDTSNNNKNDAAPLQLPQDPMAAAPTFSC 165
E + Y +++ P ++ +K P +A + C
Sbjct: 158 LTDETS-----YDPRKQKFEQGKNPSTTNAEIEKEEPSKKQVVP---SSQRLA---DYKC 206
Query: 166 PICMGPLSEATSTKCGHIFCKDCIKGAI---AAQGKCPNCRQKV 206
IC+ + T CGHIFC CI A+ AA KCP CR+KV
Sbjct: 207 VICLDSPENLSCTPCGHIFCNFCILSALGTTAATQKCPVCRRKV 250
>ZFIN|ZDB-GENE-101021-4 [details] [associations]
symbol:lonrf1 "LON peptidase N-terminal domain and
ring finger 1" species:7955 "Danio rerio" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005
PROSITE:PS50089 PROSITE:PS50293 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-101021-4 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
GeneTree:ENSGT00440000033329 EMBL:FP016207 EMBL:FP085387
EMBL:FP101912 IPI:IPI00998181 Ensembl:ENSDART00000109935
Bgee:F1QKK1 Uniprot:F1QKK1
Length = 605
Score = 125 (49.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRVYLPTL 219
F CP+C+ E +T CGH FCK+CI+ ++ +CP C+Q + + R Y PT+
Sbjct: 313 FECPLCIRLFYEPVTTPCGHTFCKNCIERSLDHNLRCPLCKQPLQEYFKNRKYNPTV 369
>CGD|CAL0005238 [details] [associations]
symbol:orf19.5438 species:5476 "Candida albicans" [GO:0016925
"protein sumoylation" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0000723 "telomere maintenance"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 CGD:CAL0005238 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AACQ01000051 EMBL:AACQ01000050
RefSeq:XP_717716.1 RefSeq:XP_717810.1 ProteinModelPortal:Q5A7M8
GeneID:3640523 GeneID:3640681 KEGG:cal:CaO19.12893
KEGG:cal:CaO19.5438 eggNOG:NOG131815 Uniprot:Q5A7M8
Length = 129
Score = 102 (41.0 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 165 CPICMGPLSEATSTKCGHIFCKDCIKGAIAA-------------QGKCPNCRQKVGKRGI 211
CPIC + A +T CGH+FC +CI+ +I++ +G CP CR++V +
Sbjct: 51 CPICFDEVRRAITTSCGHVFCLECIERSISSSHARGQVRSSQRGRGLCPLCRKQV----V 106
Query: 212 FRVYLP 217
F+ +P
Sbjct: 107 FKETIP 112
>UNIPROTKB|F1NCS0 [details] [associations]
symbol:F1NCS0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00390000017123 EMBL:AADN02012507
EMBL:AADN02012506 IPI:IPI00822105 Ensembl:ENSGALT00000038028
OMA:GEMALRS Uniprot:F1NCS0
Length = 138
Score = 102 (41.0 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 24/53 (45%), Positives = 29/53 (54%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCI----K-----GAIAAQGKCPNCRQKV 206
FSCPIC+ ++ T CGH+FC C+ K GAI CP CRQKV
Sbjct: 17 FSCPICLQTVTLPVETNCGHLFCGSCLITYWKHSPWLGAII----CPLCRQKV 65
>UNIPROTKB|F8WD60 [details] [associations]
symbol:RNF168 "E3 ubiquitin-protein ligase RNF168"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC092933 EMBL:AC117490 HGNC:HGNC:26661 IPI:IPI00925077
ProteinModelPortal:F8WD60 SMR:F8WD60 Ensembl:ENST00000437070
ArrayExpress:F8WD60 Bgee:F8WD60 Uniprot:F8WD60
Length = 116
Score = 102 (41.0 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 150 LQLPQDPMAAAPTFSCPICMGPLSEATSTKCGHIFCKDCIKGAIA-AQGKCPNCRQKV 206
+ LP+D + + C ICM L E + C H CK C + + A CP CR++V
Sbjct: 1 MALPKDAIPSLSECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRV 58
>FB|FBgn0032660 [details] [associations]
symbol:elfless "elfless" species:7227 "Drosophila
melanogaster" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0005634
EMBL:AE014134 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000010318
FlyBase:FBgn0032660 EMBL:BT072897 RefSeq:NP_001163003.1
RefSeq:NP_609860.2 UniGene:Dm.19846 SMR:Q9VJB0 IntAct:Q9VJB0
MINT:MINT-797819 STRING:Q9VJB0 EnsemblMetazoa:FBtr0302030
EnsemblMetazoa:FBtr0302031 GeneID:35076 KEGG:dme:Dmel_CG15150
UCSC:CG15150-RA CTD:35076 eggNOG:NOG319336 InParanoid:Q9VJB0
OrthoDB:EOG4FXPR8 GenomeRNAi:35076 NextBio:791733 Uniprot:Q9VJB0
Length = 229
Score = 118 (46.6 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 25/86 (29%), Positives = 46/86 (53%)
Query: 136 NVDTSNNNKNDAAPLQLPQDPMAAAPT---FSCPICMGPLSEA--TSTKCGHIFCKDCIK 190
+ ++S++N++ ++ D + + ++CP+C+ + E ST CGH+FCK CIK
Sbjct: 146 HTESSDSNEDSPPNKRIKSDDEESKKSVLPYNCPVCLEDVREKLPVSTNCGHVFCKACIK 205
Query: 191 GAIAAQGKCPNCRQKVGKRGIFRVYL 216
A+ CP C V + R++L
Sbjct: 206 RAVDTGRVCPLCG--VDEPEFHRIFL 229
>UNIPROTKB|I3L5Q2 [details] [associations]
symbol:RNF151 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR008974
InterPro:IPR013323 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50145
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00530000063647 OMA:PCCRKEV Ensembl:ENSSSCT00000022774
Uniprot:I3L5Q2
Length = 232
Score = 117 (46.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRV 214
F C +C G L + C HIFCK CI +A Q CP CR++V ++ + V
Sbjct: 14 FLCSVCHGVLKKPVRLPCSHIFCKKCILHWLARQKTCPCCRKEVKRKKMVHV 65
>ZFIN|ZDB-GENE-030131-5243 [details] [associations]
symbol:rnf2 "ring finger protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0033339 "pectoral fin development" evidence=IMP] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0016604 "nuclear body"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0000278
"mitotic cell cycle" evidence=ISS] [GO:0035102 "PRC1 complex"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
ZFIN:ZDB-GENE-030131-5243 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0033339 GO:GO:0071339
GO:GO:0035102 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 EMBL:AY576996
EMBL:BC044472 EMBL:AF196346 IPI:IPI00499481 RefSeq:NP_571288.1
UniGene:Dr.31086 ProteinModelPortal:Q803I4 SMR:Q803I4 STRING:Q803I4
Ensembl:ENSDART00000017034 GeneID:327035 KEGG:dre:327035 CTD:6045
InParanoid:Q803I4 OrthoDB:EOG4R7VB1 NextBio:20809851 Bgee:Q803I4
Uniprot:Q803I4
Length = 336
Score = 120 (47.3 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 150 LQLPQDPMAAAPTFSCPICMGPLSEATSTK-CGHIFCKDCIKGAIAAQGK-CPNCRQK-V 206
L++ P + CPIC+ L +TK C H FC DCI A+ + K CP CR+K V
Sbjct: 36 LEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLV 95
Query: 207 GKRGI 211
KR +
Sbjct: 96 SKRSL 100
>UNIPROTKB|F8W8Z4 [details] [associations]
symbol:RNF40 "E3 ubiquitin-protein ligase BRE1B"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC106886 HGNC:HGNC:16867
IPI:IPI01012850 ProteinModelPortal:F8W8Z4 SMR:F8W8Z4
Ensembl:ENST00000402121 UCSC:uc010vfb.2 ArrayExpress:F8W8Z4
Bgee:F8W8Z4 Uniprot:F8W8Z4
Length = 693
Score = 124 (48.7 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCIKGAIAA-QGKCPNCRQKVGKRGIFRVYL 216
+CP C +A TKC H+FC +C++G A Q KCP C G R+Y+
Sbjct: 639 TCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRIYI 692
>RGD|1305491 [details] [associations]
symbol:Rnf2 "ring finger protein 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000151
"ubiquitin ligase complex" evidence=ISO;ISS] [GO:0000278 "mitotic
cell cycle" evidence=IEA;ISO] [GO:0001702 "gastrulation with mouth
forming second" evidence=IEA;ISO] [GO:0001739 "sex chromatin"
evidence=IEA;ISO] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISO;ISS] [GO:0009948 "anterior/posterior axis
specification" evidence=IEA;ISO] [GO:0016574 "histone
ubiquitination" evidence=ISO] [GO:0016604 "nuclear body"
evidence=IEA;ISO] [GO:0031519 "PcG protein complex"
evidence=ISO;ISS] [GO:0035102 "PRC1 complex" evidence=ISO;ISS]
[GO:0035518 "histone H2A monoubiquitination" evidence=IEA;ISO]
[GO:0071339 "MLL1 complex" evidence=ISO;ISS] [GO:0071535 "RING-like
zinc finger domain binding" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 RGD:1305491 Prosite:PS00518
GO:GO:0005694 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0035102 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 CTD:6045
OrthoDB:EOG4R7VB1 EMBL:BC098941 IPI:IPI00950204
RefSeq:NP_001020838.1 UniGene:Rn.19719 ProteinModelPortal:Q4KLY4
SMR:Q4KLY4 STRING:Q4KLY4 PhosphoSite:Q4KLY4
Ensembl:ENSRNOT00000065944 GeneID:304850 KEGG:rno:304850
UCSC:RGD:1305491 InParanoid:Q4KLY4 NextBio:653721
ArrayExpress:Q4KLY4 Genevestigator:Q4KLY4
GermOnline:ENSRNOG00000002454 Uniprot:Q4KLY4
Length = 308
Score = 119 (46.9 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 150 LQLPQDPMAAAPTFSCPICMGPLSEATSTK-CGHIFCKDCIKGAIAAQGK-CPNCRQK-V 206
L++ P + CPIC+ L +TK C H FC DCI A+ + K CP CR+K V
Sbjct: 36 LEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLV 95
Query: 207 GKRGI 211
KR +
Sbjct: 96 SKRSL 100
>FB|FBgn0036897 [details] [associations]
symbol:CG8786 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=ISS] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0072572
"poly-ADP-D-ribose binding" evidence=ISS] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 EMBL:AE014296
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031648 InterPro:IPR004170 Pfam:PF02825
PROSITE:PS50918 KO:K15700 GeneID:40144 FlyBase:FBgn0036897
GenomeRNAi:40144 NextBio:817226 UniGene:Dm.6362
KEGG:dme:Dmel_CG8786 RefSeq:NP_001137980.2
ProteinModelPortal:B7Z083 SMR:B7Z083 PhylomeDB:B7Z083
Uniprot:B7Z083
Length = 495
Score = 122 (48.0 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 24/62 (38%), Positives = 31/62 (50%)
Query: 146 DAAPLQLPQD-PMAAAPTFSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQ 204
DAA +D P AAA CPIC+ CGHIFC C+KG +C CR+
Sbjct: 104 DAAAAVSGEDSPSAAAAALECPICLQTCIHPARLPCGHIFCFLCVKGVAYKNRRCAMCRR 163
Query: 205 KV 206
++
Sbjct: 164 EI 165
>DICTYBASE|DDB_G0270568 [details] [associations]
symbol:DDB_G0270568 "C3HC4-type zinc
finger-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 dictyBase:DDB_G0270568 Prosite:PS00518
EMBL:AAFI02000005 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:COG5432
RefSeq:XP_646094.2 ProteinModelPortal:Q55DN7
EnsemblProtists:DDB0201772 GeneID:8617044 KEGG:ddi:DDB_G0270568
InParanoid:Q55DN7 OMA:VPPSFIN ProtClustDB:CLSZ2445168
Uniprot:Q55DN7
Length = 419
Score = 121 (47.7 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFR 213
SCPIC+ + E ++ CGH FC C+ I KCP C + K I+R
Sbjct: 24 SCPICLNFIEECSTLSCGHNFCHKCVSECINRNHKCPLCNKTALKENIYR 73
>FB|FBgn0036421 [details] [associations]
symbol:CG13481 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:AE014296
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00540000072968 EMBL:BT022984 RefSeq:NP_001097605.1
UniGene:Dm.27141 SMR:Q9VUE3 STRING:Q9VUE3
EnsemblMetazoa:FBtr0113170 EnsemblMetazoa:FBtr0333022 GeneID:39579
KEGG:dme:Dmel_CG13481 UCSC:CG13481-RB FlyBase:FBgn0036421
InParanoid:Q9VUE3 OrthoDB:EOG4866VT GenomeRNAi:39579 NextBio:814366
Uniprot:Q9VUE3
Length = 176
Score = 103 (41.3 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 164 SCPICMGPLSE-----ATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRVYLPT 218
+C IC+ P S S +CGH+F CI+ AI +CP CR++ + R++
Sbjct: 114 TCSICLSPWSSNGRHRVVSLRCGHLFGNSCIRTAIRRSHRCPICRRRALHADVRRIFSRR 173
Query: 219 LS 220
+S
Sbjct: 174 IS 175
Score = 40 (19.1 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 8 QCLGRNAR--DSQRRRILPELDLN 29
+ L N + +S+R RIL +L LN
Sbjct: 50 EVLNNNMKWFNSERTRILEQLQLN 73
>UNIPROTKB|F1RG77 [details] [associations]
symbol:RNF40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0033523 "histone H2B ubiquitination"
evidence=IEA] [GO:0033503 "HULC complex" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0010390
"histone monoubiquitination" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GO:GO:0033523 GO:GO:0010390
GeneTree:ENSGT00390000002866 GO:GO:0033503 OMA:CHESQGE
EMBL:FP102572 Ensembl:ENSSSCT00000008534 Uniprot:F1RG77
Length = 1000
Score = 125 (49.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCIKGAIAA-QGKCPNCRQKVGKRGIFRVYL 216
+CP C +A TKC H+FC +C++G A Q KCP C G RVY+
Sbjct: 946 TCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYI 999
>UNIPROTKB|E1BCI2 [details] [associations]
symbol:RNF40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0033523 "histone H2B ubiquitination"
evidence=IEA] [GO:0033503 "HULC complex" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0010390
"histone monoubiquitination" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 KO:K10696 GO:GO:0033523
GO:GO:0010390 GeneTree:ENSGT00390000002866 GO:GO:0033503 CTD:9810
OMA:CHESQGE EMBL:DAAA02057908 IPI:IPI00704650 RefSeq:NP_001193381.1
UniGene:Bt.21360 ProteinModelPortal:E1BCI2
Ensembl:ENSBTAT00000004443 GeneID:539901 KEGG:bta:539901
NextBio:20878289 Uniprot:E1BCI2
Length = 1001
Score = 125 (49.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCIKGAIAA-QGKCPNCRQKVGKRGIFRVYL 216
+CP C +A TKC H+FC +C++G A Q KCP C G RVY+
Sbjct: 947 TCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYI 1000
>UNIPROTKB|E2R1L5 [details] [associations]
symbol:RNF40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0033523 "histone H2B ubiquitination"
evidence=IEA] [GO:0033503 "HULC complex" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0010390
"histone monoubiquitination" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GO:GO:0033523 GO:GO:0010390
GeneTree:ENSGT00390000002866 GO:GO:0033503 OMA:CHESQGE
EMBL:AAEX03004385 EMBL:AAEX03004386 Ensembl:ENSCAFT00000026446
Uniprot:E2R1L5
Length = 1001
Score = 125 (49.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCIKGAIAA-QGKCPNCRQKVGKRGIFRVYL 216
+CP C +A TKC H+FC +C++G A Q KCP C G RVY+
Sbjct: 947 TCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYI 1000
>MGI|MGI:2142048 [details] [associations]
symbol:Rnf40 "ring finger protein 40" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010390 "histone monoubiquitination" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0017075 "syntaxin-1 binding"
evidence=ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0033503 "HULC complex" evidence=ISO] [GO:0033523 "histone H2B
ubiquitination" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2142048
Prosite:PS00518 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004842 InterPro:IPR017907 eggNOG:NOG263074
KO:K10696 GO:GO:0033523 GO:GO:0010390 GeneTree:ENSGT00390000002866
HOGENOM:HOG000231526 HOVERGEN:HBG080312 GO:GO:0033503 CTD:9810
OMA:CHESQGE OrthoDB:EOG4933HD EMBL:AK129184 EMBL:AK042654
EMBL:AK089805 EMBL:AK154982 EMBL:AK171462 EMBL:BC038348
IPI:IPI00621791 RefSeq:NP_758485.2 UniGene:Mm.41122
ProteinModelPortal:Q3U319 SMR:Q3U319 PhosphoSite:Q3U319
PaxDb:Q3U319 PRIDE:Q3U319 Ensembl:ENSMUST00000033088 GeneID:233900
KEGG:mmu:233900 UCSC:uc009jwe.2 InParanoid:Q3U319 NextBio:381935
Bgee:Q3U319 CleanEx:MM_RNF40 Genevestigator:Q3U319
GermOnline:ENSMUSG00000030816 Uniprot:Q3U319
Length = 1001
Score = 125 (49.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCIKGAIAA-QGKCPNCRQKVGKRGIFRVYL 216
+CP C +A TKC H+FC +C++G A Q KCP C G RVY+
Sbjct: 947 TCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYI 1000
>RGD|628638 [details] [associations]
symbol:Rnf40 "ring finger protein 40, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin
ligase complex" evidence=ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA;ISO] [GO:0017075 "syntaxin-1 binding" evidence=IPI]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA;ISO]
[GO:0032403 "protein complex binding" evidence=IDA] [GO:0033503
"HULC complex" evidence=ISO;ISS] [GO:0033523 "histone H2B
ubiquitination" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043234 "protein complex"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 RGD:628638 Prosite:PS00518 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0046872
GO:GO:0008270 GO:GO:0043005 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004842 InterPro:IPR017907 eggNOG:NOG263074
KO:K10696 GO:GO:0033523 GO:GO:0010390 GeneTree:ENSGT00390000002866
HOGENOM:HOG000231526 HOVERGEN:HBG080312 GO:GO:0033503 CTD:9810
OMA:CHESQGE OrthoDB:EOG4933HD EMBL:AF352815 IPI:IPI00194637
RefSeq:NP_703201.1 UniGene:Rn.162466 ProteinModelPortal:Q8CJB9
IntAct:Q8CJB9 PhosphoSite:Q8CJB9 PRIDE:Q8CJB9
Ensembl:ENSRNOT00000025499 GeneID:266712 KEGG:rno:266712
UCSC:RGD:628638 InParanoid:Q8CJB9 BRENDA:6.3.2.19 NextBio:624538
Genevestigator:Q8CJB9 GermOnline:ENSRNOG00000018840 Uniprot:Q8CJB9
Length = 1002
Score = 125 (49.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCIKGAIAA-QGKCPNCRQKVGKRGIFRVYL 216
+CP C +A TKC H+FC +C++G A Q KCP C G RVY+
Sbjct: 948 TCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYI 1001
>UNIPROTKB|E1BQF7 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0001702 "gastrulation with mouth forming second"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0035102
"PRC1 complex" evidence=IEA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0071339 "MLL1 complex"
evidence=IEA] [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0000278 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 KO:K10695 OMA:MELYFAP CTD:6045
EMBL:AADN02034211 IPI:IPI00572800 RefSeq:XP_422295.2
ProteinModelPortal:E1BQF7 Ensembl:ENSGALT00000007706 GeneID:424452
KEGG:gga:424452 NextBio:20826782 Uniprot:E1BQF7
Length = 336
Score = 119 (46.9 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 150 LQLPQDPMAAAPTFSCPICMGPLSEATSTK-CGHIFCKDCIKGAIAAQGK-CPNCRQK-V 206
L++ P + CPIC+ L +TK C H FC DCI A+ + K CP CR+K V
Sbjct: 36 LEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLV 95
Query: 207 GKRGI 211
KR +
Sbjct: 96 SKRSL 100
>UNIPROTKB|A6QLQ0 [details] [associations]
symbol:RNF2 "RNF2 protein" species:9913 "Bos taurus"
[GO:0071535 "RING-like zinc finger domain binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=IEA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0035102 "PRC1 complex"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0009948
"anterior/posterior axis specification" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0000278
"mitotic cell cycle" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 GO:GO:0000122
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0009948 GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907
GO:GO:0071339 GO:GO:0000278 GO:GO:0035518 GO:GO:0035102
GO:GO:0001739 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:MELYFAP
CTD:6045 OrthoDB:EOG4R7VB1 EMBL:DAAA02043606 EMBL:BC148044
IPI:IPI00867396 RefSeq:NP_001094673.1 UniGene:Bt.102990 SMR:A6QLQ0
STRING:A6QLQ0 Ensembl:ENSBTAT00000000025 GeneID:540090
KEGG:bta:540090 InParanoid:A6QLQ0 NextBio:20878411 Uniprot:A6QLQ0
Length = 336
Score = 119 (46.9 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 150 LQLPQDPMAAAPTFSCPICMGPLSEATSTK-CGHIFCKDCIKGAIAAQGK-CPNCRQK-V 206
L++ P + CPIC+ L +TK C H FC DCI A+ + K CP CR+K V
Sbjct: 36 LEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLV 95
Query: 207 GKRGI 211
KR +
Sbjct: 96 SKRSL 100
>UNIPROTKB|Q99496 [details] [associations]
symbol:RNF2 "E3 ubiquitin-protein ligase RING2"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000278 "mitotic cell cycle" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0001739
"sex chromatin" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071339 "MLL1 complex"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031519 "PcG
protein complex" evidence=IDA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IDA] [GO:0035102 "PRC1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0071535
"RING-like zinc finger domain binding" evidence=IPI] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 EMBL:CH471067 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009948 GO:GO:0016604 GO:GO:0000151
InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278 CleanEx:HS_BAP1
GO:GO:0035518 GO:GO:0035102 PDB:2H0D PDB:3RPG PDBsum:2H0D
PDBsum:3RPG PDB:3GS2 PDBsum:3GS2 GO:GO:0001739 EMBL:AL109865
eggNOG:NOG324386 HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695
OMA:MELYFAP CTD:6045 OrthoDB:EOG4R7VB1 EMBL:Y10571 EMBL:AF141327
EMBL:AK314793 EMBL:BC012583 IPI:IPI00026993 RefSeq:NP_009143.1
UniGene:Hs.591490 PDB:3H8H PDB:3IXS PDBsum:3H8H PDBsum:3IXS
ProteinModelPortal:Q99496 SMR:Q99496 DIP:DIP-40034N IntAct:Q99496
MINT:MINT-1420125 STRING:Q99496 PhosphoSite:Q99496 DMDM:62901044
PaxDb:Q99496 PRIDE:Q99496 DNASU:6045 Ensembl:ENST00000367510
Ensembl:ENST00000453650 GeneID:6045 KEGG:hsa:6045 UCSC:uc001grc.1
GeneCards:GC01P185014 HGNC:HGNC:10061 HPA:HPA026803 MIM:608985
neXtProt:NX_Q99496 PharmGKB:PA34426 InParanoid:Q99496
PhylomeDB:Q99496 EvolutionaryTrace:Q99496 GenomeRNAi:6045
NextBio:23553 ArrayExpress:Q99496 Bgee:Q99496 CleanEx:HS_RNF2
Genevestigator:Q99496 GermOnline:ENSG00000121481 Uniprot:Q99496
Length = 336
Score = 119 (46.9 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 150 LQLPQDPMAAAPTFSCPICMGPLSEATSTK-CGHIFCKDCIKGAIAAQGK-CPNCRQK-V 206
L++ P + CPIC+ L +TK C H FC DCI A+ + K CP CR+K V
Sbjct: 36 LEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLV 95
Query: 207 GKRGI 211
KR +
Sbjct: 96 SKRSL 100
>UNIPROTKB|F1S3N6 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0035518
"histone H2A monoubiquitination" evidence=IEA] [GO:0035102 "PRC1
complex" evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA]
[GO:0009948 "anterior/posterior axis specification" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0001702 "gastrulation with mouth forming second"
evidence=IEA] [GO:0000278 "mitotic cell cycle" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 KO:K10695 OMA:MELYFAP EMBL:CU915492
RefSeq:XP_003130427.1 Ensembl:ENSSSCT00000016959 GeneID:100517846
KEGG:ssc:100517846 Uniprot:F1S3N6
Length = 336
Score = 119 (46.9 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 150 LQLPQDPMAAAPTFSCPICMGPLSEATSTK-CGHIFCKDCIKGAIAAQGK-CPNCRQK-V 206
L++ P + CPIC+ L +TK C H FC DCI A+ + K CP CR+K V
Sbjct: 36 LEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLV 95
Query: 207 GKRGI 211
KR +
Sbjct: 96 SKRSL 100
>UNIPROTKB|Q5R9J5 [details] [associations]
symbol:RNF2 "E3 ubiquitin-protein ligase RING2"
species:9601 "Pongo abelii" [GO:0000151 "ubiquitin ligase complex"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0031519 "PcG protein complex" evidence=ISS] [GO:0035102 "PRC1
complex" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005694 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0006351
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151
InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102 HOVERGEN:HBG079942
KO:K10695 CTD:6045 EMBL:CR859392 RefSeq:NP_001127433.1
UniGene:Pab.7792 ProteinModelPortal:Q5R9J5 SMR:Q5R9J5 PRIDE:Q5R9J5
GeneID:100174504 KEGG:pon:100174504 InParanoid:Q5R9J5
Uniprot:Q5R9J5
Length = 336
Score = 119 (46.9 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 150 LQLPQDPMAAAPTFSCPICMGPLSEATSTK-CGHIFCKDCIKGAIAAQGK-CPNCRQK-V 206
L++ P + CPIC+ L +TK C H FC DCI A+ + K CP CR+K V
Sbjct: 36 LEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLV 95
Query: 207 GKRGI 211
KR +
Sbjct: 96 SKRSL 100
>MGI|MGI:1101759 [details] [associations]
symbol:Rnf2 "ring finger protein 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP] [GO:0000151 "ubiquitin
ligase complex" evidence=ISO;IDA] [GO:0000278 "mitotic cell cycle"
evidence=IMP] [GO:0001702 "gastrulation with mouth forming second"
evidence=IMP] [GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=ISO] [GO:0009948 "anterior/posterior axis
specification" evidence=IMP] [GO:0016574 "histone ubiquitination"
evidence=IGI;IDA] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;IDA] [GO:0035102 "PRC1 complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISO] [GO:0071535 "RING-like
zinc finger domain binding" evidence=ISO] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1101759
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278
GO:GO:0035518 GO:GO:0031519 GO:GO:0035102 GO:GO:0016574 PDB:2CKL
PDBsum:2CKL GO:GO:0001739 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:MELYFAP CTD:6045 OrthoDB:EOG4R7VB1
EMBL:Y12880 EMBL:Y12783 EMBL:AK145767 EMBL:AK012358 EMBL:AK013124
EMBL:AK030319 EMBL:AK090066 EMBL:CT010297 EMBL:BC020122
IPI:IPI00133880 RefSeq:NP_035407.1 UniGene:Mm.474038
ProteinModelPortal:Q9CQJ4 SMR:Q9CQJ4 IntAct:Q9CQJ4
MINT:MINT-1341250 STRING:Q9CQJ4 PhosphoSite:Q9CQJ4 PaxDb:Q9CQJ4
PRIDE:Q9CQJ4 Ensembl:ENSMUST00000076110 GeneID:19821 KEGG:mmu:19821
UCSC:uc007cyx.1 InParanoid:Q9CQJ4 EvolutionaryTrace:Q9CQJ4
NextBio:297285 Bgee:Q9CQJ4 CleanEx:MM_RNF2 Genevestigator:Q9CQJ4
GermOnline:ENSMUSG00000026484 Uniprot:Q9CQJ4
Length = 336
Score = 119 (46.9 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 150 LQLPQDPMAAAPTFSCPICMGPLSEATSTK-CGHIFCKDCIKGAIAAQGK-CPNCRQK-V 206
L++ P + CPIC+ L +TK C H FC DCI A+ + K CP CR+K V
Sbjct: 36 LEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLV 95
Query: 207 GKRGI 211
KR +
Sbjct: 96 SKRSL 100
>UNIPROTKB|E2RFW1 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071535 "RING-like zinc finger domain
binding" evidence=IEA] [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0035518 "histone H2A monoubiquitination" evidence=IEA]
[GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001739 "sex
chromatin" evidence=IEA] [GO:0001702 "gastrulation with mouth
forming second" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0000122 GO:GO:0001702
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0000278 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 OMA:MELYFAP EMBL:AAEX03005159
Ensembl:ENSCAFT00000021407 Uniprot:E2RFW1
Length = 337
Score = 119 (46.9 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 150 LQLPQDPMAAAPTFSCPICMGPLSEATSTK-CGHIFCKDCIKGAIAAQGK-CPNCRQK-V 206
L++ P + CPIC+ L +TK C H FC DCI A+ + K CP CR+K V
Sbjct: 36 LEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLV 95
Query: 207 GKRGI 211
KR +
Sbjct: 96 SKRSL 100
>GENEDB_PFALCIPARUM|PF11_0244 [details] [associations]
symbol:PF11_0244 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AE014186 RefSeq:XP_001347915.1
ProteinModelPortal:Q8IID0 IntAct:Q8IID0 MINT:MINT-1640413
PRIDE:Q8IID0 EnsemblProtists:PF11_0244:mRNA GeneID:810791
KEGG:pfa:PF11_0244 EuPathDB:PlasmoDB:PF3D7_1123300
ProtClustDB:CLSZ2432487 Uniprot:Q8IID0
Length = 689
Score = 123 (48.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 29/90 (32%), Positives = 41/90 (45%)
Query: 123 NRPDEATPDNCCINVDTSNNNKNDAAPLQLPQDPMAAAPTFSCPICMGPLSEATSTKCGH 182
N D T N I+ + +NNN + + + C ICM L + CGH
Sbjct: 183 NDDDFYTCTNTSIDKEINNNNVKNKKQKECINNEEKIPSEVECAICMKLLIVPVTIPCGH 242
Query: 183 IFCKDCIKGAIAAQGKCPNCRQKVG-KRGI 211
FC+DCI+ A + CP CR +G K+ I
Sbjct: 243 NFCRDCIEKAKEYKNLCPLCRSNMGDKKNI 272
>UNIPROTKB|Q8IID0 [details] [associations]
symbol:PF11_0244 "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AE014186 RefSeq:XP_001347915.1
ProteinModelPortal:Q8IID0 IntAct:Q8IID0 MINT:MINT-1640413
PRIDE:Q8IID0 EnsemblProtists:PF11_0244:mRNA GeneID:810791
KEGG:pfa:PF11_0244 EuPathDB:PlasmoDB:PF3D7_1123300
ProtClustDB:CLSZ2432487 Uniprot:Q8IID0
Length = 689
Score = 123 (48.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 29/90 (32%), Positives = 41/90 (45%)
Query: 123 NRPDEATPDNCCINVDTSNNNKNDAAPLQLPQDPMAAAPTFSCPICMGPLSEATSTKCGH 182
N D T N I+ + +NNN + + + C ICM L + CGH
Sbjct: 183 NDDDFYTCTNTSIDKEINNNNVKNKKQKECINNEEKIPSEVECAICMKLLIVPVTIPCGH 242
Query: 183 IFCKDCIKGAIAAQGKCPNCRQKVG-KRGI 211
FC+DCI+ A + CP CR +G K+ I
Sbjct: 243 NFCRDCIEKAKEYKNLCPLCRSNMGDKKNI 272
>UNIPROTKB|Q2TBT8 [details] [associations]
symbol:RNF151 "RING finger protein 151" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS51081
SMART:SM00184 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 EMBL:BC109671
IPI:IPI00695483 RefSeq:NP_001070506.1 UniGene:Bt.54154
ProteinModelPortal:Q2TBT8 PRIDE:Q2TBT8 Ensembl:ENSBTAT00000047302
GeneID:767973 KEGG:bta:767973 CTD:146310 eggNOG:NOG319521
GeneTree:ENSGT00530000063647 HOGENOM:HOG000154154
HOVERGEN:HBG087956 InParanoid:Q2TBT8 OMA:PCCRKEV OrthoDB:EOG4V6ZHF
NextBio:20918328 Uniprot:Q2TBT8
Length = 240
Score = 116 (45.9 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 22/52 (42%), Positives = 27/52 (51%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRV 214
F C +C G L C HIFCK CI +A Q CP CR++V R + V
Sbjct: 18 FLCSVCHGVLKRPVRLPCSHIFCKKCILRWLARQKTCPCCRKEVRHRKMVHV 69
>UNIPROTKB|F1Q031 [details] [associations]
symbol:RNF151 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR008974 InterPro:IPR013010
InterPro:IPR013323 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS51081 SMART:SM00184 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00530000063647 OMA:PCCRKEV EMBL:AAEX03004635
Ensembl:ENSCAFT00000030950 Uniprot:F1Q031
Length = 244
Score = 116 (45.9 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRV 214
F C +C G L C HIFCK CI +A Q CP CR++V ++ + V
Sbjct: 18 FLCSVCHGVLKRPVRLPCSHIFCKKCILRWLARQKTCPCCRKEVKRKKMVHV 69
>UNIPROTKB|J3KSI2 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HGNC:HGNC:17765 EMBL:AC011825 Ensembl:ENST00000578107
Uniprot:J3KSI2
Length = 108
Score = 99 (39.9 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 163 FSCPICMGPL-SEATSTKCGHIFCKDCIKGAIAAQGK-CPNCRQKVGKR 209
F CP+C L + +T C H+FC+ C A+ G CP CR V +R
Sbjct: 16 FYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGNVTRR 64
>UNIPROTKB|H3BP71 [details] [associations]
symbol:RNF40 "E3 ubiquitin-protein ligase BRE1B"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC106886 HGNC:HGNC:16867
ProteinModelPortal:H3BP71 SMR:H3BP71 Ensembl:ENST00000563683
Bgee:H3BP71 Uniprot:H3BP71
Length = 961
Score = 124 (48.7 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCIKGAIAA-QGKCPNCRQKVGKRGIFRVYL 216
+CP C +A TKC H+FC +C++G A Q KCP C G R+Y+
Sbjct: 907 TCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRIYI 960
>UNIPROTKB|O75150 [details] [associations]
symbol:RNF40 "E3 ubiquitin-protein ligase BRE1B"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017075 "syntaxin-1 binding" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0033523 "histone H2B
ubiquitination" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010390 "histone monoubiquitination"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0043005 "neuron projection" evidence=ISS] [GO:0033503 "HULC
complex" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0043005
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
InterPro:IPR017907 eggNOG:NOG263074 KO:K10696 GO:GO:0033523
GO:GO:0010390 HOVERGEN:HBG080312 GO:GO:0033503 EMBL:AF122819
EMBL:AB014561 EMBL:AK027406 EMBL:BX640763 EMBL:CR627431
EMBL:AC106886 EMBL:BC004527 EMBL:BC006133 EMBL:BC011769
EMBL:BC018647 EMBL:BC030802 IPI:IPI00162563 IPI:IPI00290648
IPI:IPI00377273 PIR:JC7363 RefSeq:NP_001193962.1
RefSeq:NP_001193963.1 RefSeq:NP_055586.1 UniGene:Hs.65238
ProteinModelPortal:O75150 SMR:O75150 IntAct:O75150
MINT:MINT-1466706 STRING:O75150 PhosphoSite:O75150 PaxDb:O75150
PRIDE:O75150 DNASU:9810 Ensembl:ENST00000324685
Ensembl:ENST00000357890 GeneID:9810 KEGG:hsa:9810 UCSC:uc002dzq.3
UCSC:uc010cab.3 CTD:9810 GeneCards:GC16P030773 HGNC:HGNC:16867
HPA:HPA041330 MIM:607700 neXtProt:NX_O75150 PharmGKB:PA34440
InParanoid:O75150 OMA:CHESQGE OrthoDB:EOG4933HD PhylomeDB:O75150
GenomeRNAi:9810 NextBio:36932 ArrayExpress:O75150 Bgee:O75150
CleanEx:HS_RNF40 Genevestigator:O75150 GermOnline:ENSG00000103549
Uniprot:O75150
Length = 1001
Score = 124 (48.7 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCIKGAIAA-QGKCPNCRQKVGKRGIFRVYL 216
+CP C +A TKC H+FC +C++G A Q KCP C G R+Y+
Sbjct: 947 TCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRIYI 1000
>UNIPROTKB|Q4R7K7 [details] [associations]
symbol:RNF40 "E3 ubiquitin-protein ligase BRE1B"
species:9541 "Macaca fascicularis" [GO:0000151 "ubiquitin ligase
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010390 "histone monoubiquitination" evidence=ISS] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISS] [GO:0033503 "HULC
complex" evidence=ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634 GO:GO:0042803
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031625 GO:GO:0033523
GO:GO:0010390 HOVERGEN:HBG080312 GO:GO:0033503 EMBL:AB168810
ProteinModelPortal:Q4R7K7 PRIDE:Q4R7K7 Uniprot:Q4R7K7
Length = 1001
Score = 124 (48.7 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCIKGAIAA-QGKCPNCRQKVGKRGIFRVYL 216
+CP C +A TKC H+FC +C++G A Q KCP C G R+Y+
Sbjct: 947 TCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRIYI 1000
>UNIPROTKB|Q5RAU7 [details] [associations]
symbol:RNF40 "E3 ubiquitin-protein ligase BRE1B"
species:9601 "Pongo abelii" [GO:0000151 "ubiquitin ligase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0010390
"histone monoubiquitination" evidence=ISS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISS] [GO:0033503 "HULC complex"
evidence=ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634 GO:GO:0042803
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031625 KO:K10696
GO:GO:0033523 GO:GO:0010390 HOVERGEN:HBG080312 GO:GO:0033503
CTD:9810 EMBL:CR858915 EMBL:CR859085 RefSeq:NP_001125651.1
RefSeq:NP_001128807.1 UniGene:Pab.19132 UniGene:Pab.19770
ProteinModelPortal:Q5RAU7 PRIDE:Q5RAU7 GeneID:100172570
GeneID:100189714 KEGG:pon:100172570 KEGG:pon:100189714
InParanoid:Q5RAU7 Uniprot:Q5RAU7
Length = 1001
Score = 124 (48.7 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCIKGAIAA-QGKCPNCRQKVGKRGIFRVYL 216
+CP C +A TKC H+FC +C++G A Q KCP C G R+Y+
Sbjct: 947 TCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRIYI 1000
>ZFIN|ZDB-GENE-060929-548 [details] [associations]
symbol:btr12 "bloodthirsty-related gene family,
member 12" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060929-548 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234136 HOVERGEN:HBG106862
GeneTree:ENSGT00660000095328 EMBL:BX664721 EMBL:BC124441
IPI:IPI00800043 RefSeq:NP_001070087.1 UniGene:Dr.87957
Ensembl:ENSDART00000110769 GeneID:767681 KEGG:dre:767681 CTD:767681
eggNOG:NOG331569 InParanoid:Q08C26 OrthoDB:EOG4640BN
NextBio:20918071 Uniprot:Q08C26
Length = 562
Score = 121 (47.7 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 150 LQLPQDP--MAAAPTFSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGK--CPNCRQK 205
+Q PQ P M + FSC IC+ E ST CGH FCK C++G + CP C++
Sbjct: 1 MQCPQSPGRMLSEEQFSCSICLEVFVEPVSTPCGHTFCKACLEGFWNHSKRFLCPMCKKT 60
Query: 206 VGKR 209
++
Sbjct: 61 FSRK 64
>UNIPROTKB|Q7ZWM8 [details] [associations]
symbol:rnf2-b "E3 ubiquitin-protein ligase RING2-B"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS] [GO:0071339
"MLL1 complex" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:BC046935 UniGene:Xl.76096
ProteinModelPortal:Q7ZWM8 SMR:Q7ZWM8 Xenbase:XB-GENE-6493980
Uniprot:Q7ZWM8
Length = 343
Score = 118 (46.6 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 151 QLPQDPMAAAPTFSCPICMGPLSEATSTK-CGHIFCKDCIKGAIAAQGK-CPNCRQK-VG 207
++ P + CPIC+ L +TK C H FC DCI A+ + K CP CR+K V
Sbjct: 33 EIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVS 92
Query: 208 KRGI 211
KR +
Sbjct: 93 KRSL 96
>UNIPROTKB|Q66J69 [details] [associations]
symbol:rnf2-a "E3 ubiquitin-protein ligase RING2-A"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS] [GO:0071339
"MLL1 complex" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102
HOVERGEN:HBG079942 KO:K10695 EMBL:BC081039 RefSeq:NP_001087647.1
UniGene:Xl.6549 ProteinModelPortal:Q66J69 SMR:Q66J69 GeneID:447471
KEGG:xla:447471 CTD:447471 Xenbase:XB-GENE-6253865 Uniprot:Q66J69
Length = 344
Score = 118 (46.6 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 151 QLPQDPMAAAPTFSCPICMGPLSEATSTK-CGHIFCKDCIKGAIAAQGK-CPNCRQK-VG 207
++ P + CPIC+ L +TK C H FC DCI A+ + K CP CR+K V
Sbjct: 34 EIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVS 93
Query: 208 KRGI 211
KR +
Sbjct: 94 KRSL 97
>TAIR|locus:2086666 [details] [associations]
symbol:AT3G27330 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002686 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR008166 Pfam:PF01697 IPI:IPI00542360 RefSeq:NP_189369.1
UniGene:At.5839 ProteinModelPortal:F4IWG7 SMR:F4IWG7 PRIDE:F4IWG7
EnsemblPlants:AT3G27330.1 GeneID:822354 KEGG:ath:AT3G27330
OMA:CRQLIGN ArrayExpress:F4IWG7 Uniprot:F4IWG7
Length = 913
Score = 123 (48.4 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQG-KCPNCRQKVG 207
SC IC+ E ++T CGH FCK C++ A G KCP CRQ +G
Sbjct: 723 SCAICLEICFEPSTTTCGHSFCKKCLRSAADKCGRKCPKCRQLIG 767
>UNIPROTKB|Q2KHN1 [details] [associations]
symbol:RNF151 "RING finger protein 151" species:9606 "Homo
sapiens" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR008974 InterPro:IPR013010
InterPro:IPR013323 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS51081 SMART:SM00184 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0046872 GO:GO:0008270
GO:GO:0007283 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 CTD:146310
eggNOG:NOG319521 HOGENOM:HOG000154154 HOVERGEN:HBG087956
OrthoDB:EOG4V6ZHF EMBL:BC029501 EMBL:BC113014 IPI:IPI00399168
RefSeq:NP_777563.2 UniGene:Hs.99354 ProteinModelPortal:Q2KHN1
SMR:Q2KHN1 PhosphoSite:Q2KHN1 DMDM:119371030 PRIDE:Q2KHN1
Ensembl:ENST00000321392 Ensembl:ENST00000569714 GeneID:146310
KEGG:hsa:146310 UCSC:uc002cnt.1 GeneCards:GC16P002054
HGNC:HGNC:23235 neXtProt:NX_Q2KHN1 PharmGKB:PA134992556
InParanoid:Q2KHN1 GenomeRNAi:146310 NextBio:85326 Bgee:Q2KHN1
CleanEx:HS_RNF151 Genevestigator:Q2KHN1 GermOnline:ENSG00000179580
Uniprot:Q2KHN1
Length = 245
Score = 115 (45.5 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGI 211
F C +C G L C HIFCK CI +A Q CP CR++V ++ +
Sbjct: 18 FVCSVCHGVLKRPARLPCSHIFCKKCILRWLARQKTCPCCRKEVKRKKV 66
>UNIPROTKB|F1S705 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005925 "focal adhesion" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0046872 GO:GO:0008270 GO:GO:0005925 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00700000104377
EMBL:CU638728 EMBL:CU855662 Ensembl:ENSSSCT00000016896
Uniprot:F1S705
Length = 425
Score = 119 (46.9 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKV 206
F CPIC + EA TKCGH FC CI ++ +CP C V
Sbjct: 133 FVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVV 176
>RGD|1359645 [details] [associations]
symbol:Trim40 "tripartite motif-containing 40" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
RGD:1359645 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX883051 CTD:135644 eggNOG:NOG263238
HOGENOM:HOG000060264 HOVERGEN:HBG057956 KO:K12016 OrthoDB:EOG4W9J4P
IPI:IPI00422032 RefSeq:NP_001009175.1 UniGene:Rn.215808
ProteinModelPortal:Q6MFY8 PRIDE:Q6MFY8 GeneID:365528
KEGG:rno:365528 UCSC:RGD:1359645 InParanoid:Q6MFY8 NextBio:687589
Genevestigator:Q6MFY8 Uniprot:Q6MFY8
Length = 247
Score = 115 (45.5 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 165 CPICMGPLSEATSTKCGHIFCKDCI-----KGAIAAQGKCPNCRQ 204
CPIC+ PL EA ST C H+FC+ C+ K +++ CP CR+
Sbjct: 12 CPICLDPLKEAVSTDCRHLFCRMCLIRHMDKASVSGVLSCPVCRK 56
>UNIPROTKB|Q6MFY8 [details] [associations]
symbol:Trim40 "Tripartite motif-containing protein 40"
species:10116 "Rattus norvegicus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 RGD:1359645 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:BX883051 CTD:135644
eggNOG:NOG263238 HOGENOM:HOG000060264 HOVERGEN:HBG057956 KO:K12016
OrthoDB:EOG4W9J4P IPI:IPI00422032 RefSeq:NP_001009175.1
UniGene:Rn.215808 ProteinModelPortal:Q6MFY8 PRIDE:Q6MFY8
GeneID:365528 KEGG:rno:365528 UCSC:RGD:1359645 InParanoid:Q6MFY8
NextBio:687589 Genevestigator:Q6MFY8 Uniprot:Q6MFY8
Length = 247
Score = 115 (45.5 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 165 CPICMGPLSEATSTKCGHIFCKDCI-----KGAIAAQGKCPNCRQ 204
CPIC+ PL EA ST C H+FC+ C+ K +++ CP CR+
Sbjct: 12 CPICLDPLKEAVSTDCRHLFCRMCLIRHMDKASVSGVLSCPVCRK 56
>FB|FBgn0003330 [details] [associations]
symbol:Sce "Sex combs extra" species:7227 "Drosophila
melanogaster" [GO:0045498 "sex comb development" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IDA]
[GO:0006342 "chromatin silencing" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IMP]
[GO:0008278 "cohesin complex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0030713 "ovarian follicle cell stalk
formation" evidence=IMP] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0035102 "PRC1
complex" evidence=TAS] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IMP] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 EMBL:AE014297
GO:GO:0007126 GO:GO:0005730 GO:GO:0022008 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006342 InterPro:IPR017907 GO:GO:0030713
GO:GO:0045498 GO:GO:0035518 GO:GO:0035102 GO:GO:0030708
GO:GO:0008278 GO:GO:0007062 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 KO:K10695 EMBL:AJ001514 EMBL:AY058535
RefSeq:NP_477509.1 UniGene:Dm.4170 ProteinModelPortal:Q9VB08
SMR:Q9VB08 DIP:DIP-21764N IntAct:Q9VB08 MINT:MINT-860974
STRING:Q9VB08 PaxDb:Q9VB08 PRIDE:Q9VB08 EnsemblMetazoa:FBtr0085245
GeneID:43327 KEGG:dme:Dmel_CG5595 CTD:43327 FlyBase:FBgn0003330
InParanoid:Q9VB08 OMA:MELYFAP OrthoDB:EOG489332 PhylomeDB:Q9VB08
GenomeRNAi:43327 NextBio:833362 Bgee:Q9VB08 GermOnline:CG5595
Uniprot:Q9VB08
Length = 435
Score = 119 (46.9 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 151 QLPQDPMAAAPTFSCPICMGPLSEATSTK-CGHIFCKDCIKGAIAAQGK-CPNCRQK-VG 207
++ P + CPIC+ L + +TK C H FC DCI A+ + K CP CR+K V
Sbjct: 32 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVS 91
Query: 208 KRGI 211
KR +
Sbjct: 92 KRSL 95
>UNIPROTKB|A1YER5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9595 "Gorilla gorilla gorilla" [GO:0031519 "PcG protein
complex" evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:DQ976446 ProteinModelPortal:A1YER5
SMR:A1YER5 PRIDE:A1YER5 Uniprot:A1YER5
Length = 377
Score = 118 (46.6 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 151 QLPQDPMAAAPTFSCPICMGPLSEATSTK-CGHIFCKDCIKGAIAAQGK-CPNCRQK-VG 207
++ P + CPIC+ L +TK C H FC DCI A+ + K CP CR+K V
Sbjct: 5 EIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVS 64
Query: 208 KRGI 211
KR +
Sbjct: 65 KRSL 68
>UNIPROTKB|A1YFY1 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9597 "Pan paniscus" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:DQ977176 ProteinModelPortal:A1YFY1
SMR:A1YFY1 Uniprot:A1YFY1
Length = 377
Score = 118 (46.6 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 151 QLPQDPMAAAPTFSCPICMGPLSEATSTK-CGHIFCKDCIKGAIAAQGK-CPNCRQK-VG 207
++ P + CPIC+ L +TK C H FC DCI A+ + K CP CR+K V
Sbjct: 5 EIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVS 64
Query: 208 KRGI 211
KR +
Sbjct: 65 KRSL 68
>UNIPROTKB|A2T6X5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9598 "Pan troglodytes" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
CTD:6015 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 EMBL:DQ977325 RefSeq:NP_001074951.1
UniGene:Ptr.3708 ProteinModelPortal:A2T6X5 SMR:A2T6X5 STRING:A2T6X5
Ensembl:ENSPTRT00000065372 GeneID:462604 KEGG:ptr:462604
InParanoid:A2T6X5 NextBio:20841844 Uniprot:A2T6X5
Length = 377
Score = 118 (46.6 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 151 QLPQDPMAAAPTFSCPICMGPLSEATSTK-CGHIFCKDCIKGAIAAQGK-CPNCRQK-VG 207
++ P + CPIC+ L +TK C H FC DCI A+ + K CP CR+K V
Sbjct: 5 EIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVS 64
Query: 208 KRGI 211
KR +
Sbjct: 65 KRSL 68
>UNIPROTKB|Q8WMN5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9544 "Macaca mulatta" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102 CTD:6015
eggNOG:NOG324386 HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695
OrthoDB:EOG4SXND4 EMBL:AJ421778 RefSeq:NP_001108431.1
UniGene:Mmu.17368 ProteinModelPortal:Q8WMN5 SMR:Q8WMN5
STRING:Q8WMN5 GeneID:718137 KEGG:mcc:718137 InParanoid:Q8WMN5
NextBio:19978408 Uniprot:Q8WMN5
Length = 377
Score = 118 (46.6 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 151 QLPQDPMAAAPTFSCPICMGPLSEATSTK-CGHIFCKDCIKGAIAAQGK-CPNCRQK-VG 207
++ P + CPIC+ L +TK C H FC DCI A+ + K CP CR+K V
Sbjct: 5 EIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVS 64
Query: 208 KRGI 211
KR +
Sbjct: 65 KRSL 68
>UNIPROTKB|F1MUV0 [details] [associations]
symbol:RING1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048593 "camera-type eye morphogenesis" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001739 "sex chromatin" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 OMA:QSASKTW EMBL:DAAA02054894
EMBL:DAAA02054895 IPI:IPI00718372 Ensembl:ENSBTAT00000054269
ArrayExpress:F1MUV0 Uniprot:F1MUV0
Length = 382
Score = 118 (46.6 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 151 QLPQDPMAAAPTFSCPICMGPLSEATSTK-CGHIFCKDCIKGAIAAQGK-CPNCRQK-VG 207
++ P + CPIC+ L +TK C H FC DCI A+ + K CP CR+K V
Sbjct: 9 EIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVS 68
Query: 208 KRGI 211
KR +
Sbjct: 69 KRSL 72
>UNIPROTKB|Q5TJF3 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9615 "Canis lupus familiaris" [GO:0035102 "PRC1 complex"
evidence=ISS] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0048593 "camera-type
eye morphogenesis" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0035518 "histone
H2A monoubiquitination" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 EMBL:AJ630366 GO:GO:0035518 GO:GO:0035102
GO:GO:0001739 RefSeq:NP_001041593.1 UniGene:Cfa.40924
ProteinModelPortal:Q5TJF3 SMR:Q5TJF3 STRING:Q5TJF3
Ensembl:ENSCAFT00000001442 Ensembl:ENSCAFT00000044064 GeneID:607905
KEGG:cfa:607905 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 InParanoid:Q5TJF3 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 NextBio:20893594 Uniprot:Q5TJF3
Length = 406
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 151 QLPQDPMAAAPTFSCPICMGPLSEATSTK-CGHIFCKDCIKGAIAAQGK-CPNCRQK-VG 207
++ P + CPIC+ L +TK C H FC DCI A+ + K CP CR+K V
Sbjct: 34 EIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVS 93
Query: 208 KRGI 211
KR +
Sbjct: 94 KRSL 97
>UNIPROTKB|Q06587 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0048593 "camera-type eye
morphogenesis" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016568 "chromatin modification" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0031519 "PcG protein complex" evidence=IDA]
[GO:0035518 "histone H2A monoubiquitination" evidence=IDA]
[GO:0035102 "PRC1 complex" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 EMBL:AL031228 GO:GO:0035518 GO:GO:0035102
EMBL:AL645940 EMBL:AL844527 EMBL:CR759733 EMBL:CR759786
EMBL:AL713971 EMBL:CR847841 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 EMBL:Z14000 EMBL:BT007352 EMBL:AK289355
EMBL:CR547129 EMBL:BC002922 EMBL:BC051866 IPI:IPI00455876
IPI:IPI00641330 PIR:A47380 RefSeq:NP_002922.2 UniGene:Hs.631989
ProteinModelPortal:Q06587 SMR:Q06587 DIP:DIP-42043N IntAct:Q06587
MINT:MINT-1327105 STRING:Q06587 PhosphoSite:Q06587 DMDM:90110053
PaxDb:Q06587 PeptideAtlas:Q06587 PRIDE:Q06587 DNASU:6015
Ensembl:ENST00000374656 Ensembl:ENST00000383212
Ensembl:ENST00000415941 Ensembl:ENST00000427374
Ensembl:ENST00000430233 Ensembl:ENST00000436128 GeneID:6015
KEGG:hsa:6015 UCSC:uc003odk.3 GeneCards:GC06P033177 HGNC:HGNC:10018
HPA:HPA008701 MIM:602045 neXtProt:NX_Q06587 PharmGKB:PA34393
InParanoid:Q06587 GenomeRNAi:6015 NextBio:23467 ArrayExpress:Q06587
Bgee:Q06587 CleanEx:HS_RING1 Genevestigator:Q06587
GermOnline:ENSG00000204227 Uniprot:Q06587
Length = 406
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 151 QLPQDPMAAAPTFSCPICMGPLSEATSTK-CGHIFCKDCIKGAIAAQGK-CPNCRQK-VG 207
++ P + CPIC+ L +TK C H FC DCI A+ + K CP CR+K V
Sbjct: 34 EIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVS 93
Query: 208 KRGI 211
KR +
Sbjct: 94 KRSL 97
>UNIPROTKB|A5D9P0 [details] [associations]
symbol:RING1 "Ring finger protein 1" species:9823 "Sus
scrofa" [GO:0048593 "camera-type eye morphogenesis" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001739 "sex chromatin" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4
EMBL:CT737383 EMBL:BX640585 RefSeq:NP_001177164.1 UniGene:Ssc.5967
ProteinModelPortal:A5D9P0 SMR:A5D9P0 STRING:A5D9P0
Ensembl:ENSSSCT00000001648 GeneID:100153162 KEGG:ssc:100153162
ArrayExpress:A5D9P0 Uniprot:A5D9P0
Length = 406
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 151 QLPQDPMAAAPTFSCPICMGPLSEATSTK-CGHIFCKDCIKGAIAAQGK-CPNCRQK-VG 207
++ P + CPIC+ L +TK C H FC DCI A+ + K CP CR+K V
Sbjct: 34 EIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVS 93
Query: 208 KRGI 211
KR +
Sbjct: 94 KRSL 97
>MGI|MGI:1101770 [details] [associations]
symbol:Ring1 "ring finger protein 1" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016574 "histone ubiquitination"
evidence=IGI;IDA] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;IDA] [GO:0035102 "PRC1 complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048593 "camera-type eye morphogenesis"
evidence=IGI] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1101770 Pfam:PF00097
Prosite:PS00518 GO:GO:0005737 GO:GO:0045892 GO:GO:0009952
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
EMBL:AF100956 GO:GO:0035518 GO:GO:0031519 GO:GO:0035102
GO:GO:0016574 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4
EMBL:Y12881 EMBL:AK154962 EMBL:AK155509 EMBL:CT010219 EMBL:BC009070
EMBL:BC082771 IPI:IPI00344616 IPI:IPI00742283 IPI:IPI00742392
RefSeq:NP_033092.3 UniGene:Mm.20343 ProteinModelPortal:O35730
SMR:O35730 IntAct:O35730 MINT:MINT-158295 STRING:O35730
PhosphoSite:O35730 PaxDb:O35730 PRIDE:O35730
Ensembl:ENSMUST00000025183 GeneID:19763 KEGG:mmu:19763
UCSC:uc008cas.2 InParanoid:O35730 NextBio:297212 Bgee:O35730
CleanEx:MM_RING1 Genevestigator:O35730
GermOnline:ENSMUSG00000024325 Uniprot:O35730
Length = 406
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 151 QLPQDPMAAAPTFSCPICMGPLSEATSTK-CGHIFCKDCIKGAIAAQGK-CPNCRQK-VG 207
++ P + CPIC+ L +TK C H FC DCI A+ + K CP CR+K V
Sbjct: 34 EIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVS 93
Query: 208 KRGI 211
KR +
Sbjct: 94 KRSL 97
>RGD|3576 [details] [associations]
symbol:Ring1 "ring finger protein 1" species:10116 "Rattus
norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA;ISO]
[GO:0001739 "sex chromatin" evidence=IEA;ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0016574 "histone ubiquitination" evidence=ISO]
[GO:0016604 "nuclear body" evidence=ISO] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO;ISS]
[GO:0035102 "PRC1 complex" evidence=ISO;ISS] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0048593 "camera-type eye morphogenesis" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Pfam:PF00097 RGD:3576 Prosite:PS00518 GO:GO:0005737 GO:GO:0045892
GO:GO:0009952 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907 GO:GO:0035518
GO:GO:0035102 EMBL:BX883042 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917 HOVERGEN:HBG079942
KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4 EMBL:BC098635 EMBL:X95474
IPI:IPI00417840 IPI:IPI00742451 RefSeq:NP_997714.2 UniGene:Rn.116589
ProteinModelPortal:Q6MGB6 SMR:Q6MGB6 STRING:Q6MGB6
Ensembl:ENSRNOT00000000543 GeneID:309626 KEGG:rno:309626
UCSC:RGD:3576 InParanoid:Q6MGB6 NextBio:661076 Genevestigator:Q6MGB6
GermOnline:ENSRNOG00000000467 Uniprot:Q6MGB6
Length = 406
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 151 QLPQDPMAAAPTFSCPICMGPLSEATSTK-CGHIFCKDCIKGAIAAQGK-CPNCRQK-VG 207
++ P + CPIC+ L +TK C H FC DCI A+ + K CP CR+K V
Sbjct: 34 EIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVS 93
Query: 208 KRGI 211
KR +
Sbjct: 94 KRSL 97
>UNIPROTKB|A6NL11 [details] [associations]
symbol:TRIM15 "Tripartite motif-containing protein 15"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL669914 EMBL:AL671859 EMBL:AL844220
EMBL:BX005441 EMBL:BX927221 EMBL:CR759838 EMBL:CR788282
EMBL:BX248419 HGNC:HGNC:16284 eggNOG:NOG325308 ChiTaRS:TRIM15
EMBL:CR388382 EMBL:AL671855 EMBL:AL845450 IPI:IPI00034456
SMR:A6NL11 STRING:A6NL11 Ensembl:ENST00000376688
Ensembl:ENST00000548212 Ensembl:ENST00000548642
Ensembl:ENST00000549109 Ensembl:ENST00000550400
Ensembl:ENST00000551636 Ensembl:ENST00000552676
Ensembl:ENST00000552836 HOGENOM:HOG000293220 HOVERGEN:HBG099343
Uniprot:A6NL11
Length = 115
Score = 97 (39.2 bits), Expect = 0.00010, P = 0.00010
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCIKGA--IAAQ--GK---CPNCRQK 205
+C +C GPL +A + CGH FC+ C+ + AQ GK CP C+++
Sbjct: 15 ACTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLCQEE 63
>UNIPROTKB|E9PN08 [details] [associations]
symbol:RNF5 "E3 ubiquitin-protein ligase RNF5" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX284686 HGNC:HGNC:10068 IPI:IPI00514241
ProteinModelPortal:E9PN08 SMR:E9PN08 Ensembl:ENST00000472060
ArrayExpress:E9PN08 Bgee:E9PN08 Uniprot:E9PN08
Length = 91
Score = 97 (39.2 bits), Expect = 0.00010, P = 0.00010
Identities = 19/75 (25%), Positives = 35/75 (46%)
Query: 144 KNDAAPLQLPQDPMAAAPTFSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGK---CP 200
+ D P ++ A TF C IC+ EA + CGH++C C+ + + + CP
Sbjct: 6 EEDGGPEGPNRERGGAGATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECP 65
Query: 201 NCRQKVGKRGIFRVY 215
C+ + + + +Y
Sbjct: 66 VCKAGISREKVVPLY 80
>UNIPROTKB|E7EQW4 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780 EMBL:AC135721
HGNC:HGNC:1100 ChiTaRS:BRCA1 IPI:IPI00947541
ProteinModelPortal:E7EQW4 SMR:E7EQW4 Ensembl:ENST00000476777
ArrayExpress:E7EQW4 Bgee:E7EQW4 Uniprot:E7EQW4
Length = 222
Score = 113 (44.8 bits), Expect = 0.00011, P = 0.00011
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 165 CPICMGPLSEATSTKCGHIFCKDC-IKGAIAAQG--KCPNCRQKVGKRGI 211
CPIC+ + E STKC HIFCK C +K +G +CP C+ + KR +
Sbjct: 24 CPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSL 73
>MGI|MGI:2684881 [details] [associations]
symbol:Trim40 "tripartite motif-containing 40" species:10090
"Mus musculus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 MGI:MGI:2684881 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HSSP:Q9CQJ4
GeneTree:ENSGT00700000104499 CTD:135644 eggNOG:NOG263238
HOGENOM:HOG000060264 HOVERGEN:HBG057956 KO:K12016 OMA:HYKERLN
OrthoDB:EOG4W9J4P EMBL:AK136498 EMBL:BC147336 EMBL:BC147337
IPI:IPI00355276 RefSeq:NP_001028407.1 UniGene:Mm.32606
ProteinModelPortal:Q3UWA4 SMR:Q3UWA4 PhosphoSite:Q3UWA4
PRIDE:Q3UWA4 Ensembl:ENSMUST00000087158 GeneID:195359
KEGG:mmu:195359 UCSC:uc008clk.2 InParanoid:B2RVT3 NextBio:371759
Bgee:Q3UWA4 CleanEx:MM_TRIM40 Genevestigator:Q3UWA4 Uniprot:Q3UWA4
Length = 246
Score = 114 (45.2 bits), Expect = 0.00011, P = 0.00011
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 165 CPICMGPLSEATSTKCGHIFCKDCI-----KGAIAAQGKCPNCRQ 204
CPIC+ PL EA ST C H+FC+ C+ K +++ CP CR+
Sbjct: 12 CPICLDPLKEAVSTDCRHLFCRMCLTQHMDKASVSGILSCPVCRK 56
>DICTYBASE|DDB_G0272234 [details] [associations]
symbol:pex2 "peroxisomal biogenesis factor 2"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0007031 "peroxisome organization"
evidence=IEA;ISS] [GO:0005779 "integral to peroxisomal membrane"
evidence=IC] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA]
[GO:0005778 "peroxisomal membrane" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 InterPro:IPR006845
dictyBase:DDB_G0272234 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GenomeReviews:CM000151_GR GO:GO:0007031 GO:GO:0005779
EMBL:AAFI02000008 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 Pfam:PF04757 eggNOG:NOG245402 KO:K06664
RefSeq:XP_645304.1 ProteinModelPortal:Q75JQ3
EnsemblProtists:DDB0238045 GeneID:8618470 KEGG:ddi:DDB_G0272234
OMA:QRSNCGH ProtClustDB:CLSZ2431301 Uniprot:Q75JQ3
Length = 423
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 32/81 (39%), Positives = 41/81 (50%)
Query: 138 DTSNNNKNDAA-PLQ--------LPQDPMAAAPTFSCPICMG-PLSEATSTKCGHIFCKD 187
++S NN N A+ PLQ + Q MA A CPICM P+S S CGH+FC
Sbjct: 336 NSSGNNNNTASNPLQQLQKQQLLIQQQQMALA---KCPICMNDPISMPYSADCGHLFCYY 392
Query: 188 CIKGA--IAAQGKCPNCRQKV 206
CIK + I + CP C +
Sbjct: 393 CIKTSCMIDSSFTCPRCNSLI 413
>UNIPROTKB|H0YFN9 [details] [associations]
symbol:RNF10 "RING finger protein 10" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC063943 HGNC:HGNC:10055 ChiTaRS:RNF10
Ensembl:ENST00000542207 Uniprot:H0YFN9
Length = 183
Score = 110 (43.8 bits), Expect = 0.00011, P = 0.00011
Identities = 22/52 (42%), Positives = 29/52 (55%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQ----GKCPNCRQKVGKRGI 211
SCPIC+ P + A T+CGHIFC CI ++ KCP C V K+ +
Sbjct: 22 SCPICLYPPTAAKITRCGHIFCWACILHYLSLSEKTWSKCPICYSSVHKKDL 73
>ZFIN|ZDB-GENE-070410-134 [details] [associations]
symbol:rfwd2 "ring finger and WD repeat domain 2"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Prosite:PS00518
ZFIN:ZDB-GENE-070410-134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 CTD:64326
HOVERGEN:HBG054995 OrthoDB:EOG4M0F18 EMBL:BC139708 IPI:IPI00851801
RefSeq:NP_001083011.1 UniGene:Dr.159867 ProteinModelPortal:A4QP94
STRING:A4QP94 GeneID:100037391 KEGG:dre:100037391 NextBio:20788550
Uniprot:A4QP94
Length = 694
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNC 202
F CPIC + EA TKCGH FC CI+ ++ +CP C
Sbjct: 96 FVCPICFEMIEEAHMTKCGHSFCYKCIRQSLEDSNRCPKC 135
>UNIPROTKB|F5H012 [details] [associations]
symbol:TRIM21 "E3 ubiquitin-protein ligase TRIM21"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
InterPro:IPR020457 Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:AC009758
HGNC:HGNC:11312 IPI:IPI01012950 ProteinModelPortal:F5H012
SMR:F5H012 PRIDE:F5H012 Ensembl:ENST00000543625 ArrayExpress:F5H012
Bgee:F5H012 Uniprot:F5H012
Length = 475
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGK-CPNCRQK 205
+CPIC+ P E S +CGH FC++CI G CP CRQ+
Sbjct: 15 TCPICLDPFVEPVSIECGHSFCQECISQVGKGGGSVCPVCRQR 57
>UNIPROTKB|P19474 [details] [associations]
symbol:TRIM21 "E3 ubiquitin-protein ligase TRIM21"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045787 "positive
regulation of cell cycle" evidence=IMP] [GO:0031648 "protein
destabilization" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0070206 "protein trimerization" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0006513 "protein monoubiquitination"
evidence=IDA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IDA] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0090086 "negative regulation
of protein deubiquitination" evidence=IMP] [GO:0030529
"ribonucleoprotein complex" evidence=TAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 InterPro:IPR020457
Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003723 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0007049
GO:GO:0030529 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932
GO:GO:0032088 GO:GO:0004842 GO:GO:0000209 GO:GO:0070206
InterPro:IPR017907 GO:GO:0051865 GO:GO:0045787 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0031648
GO:GO:0006513 InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407
SMART:SM00589 GO:GO:0090086 PDB:2IWG PDBsum:2IWG EMBL:AC009758
CTD:6737 eggNOG:NOG276395 HOGENOM:HOG000234133 HOVERGEN:HBG001357
KO:K10651 OrthoDB:EOG4KWJSP EMBL:M34551 EMBL:U01882 EMBL:M62800
EMBL:U13658 EMBL:U13657 EMBL:AF391283 EMBL:AY742713 EMBL:BC010861
IPI:IPI00018971 IPI:IPI00969571 PIR:A55642 RefSeq:NP_003132.2
UniGene:Hs.532357 ProteinModelPortal:P19474 SMR:P19474
IntAct:P19474 MINT:MINT-1462811 STRING:P19474 PhosphoSite:P19474
DMDM:133250 PaxDb:P19474 PRIDE:P19474 DNASU:6737
Ensembl:ENST00000254436 GeneID:6737 KEGG:hsa:6737 UCSC:uc001lyy.1
GeneCards:GC11M004406 HGNC:HGNC:11312 HPA:CAB004566 HPA:HPA005673
MIM:109092 neXtProt:NX_P19474 PharmGKB:PA36136 InParanoid:P19474
OMA:IAMKRAD EvolutionaryTrace:P19474 GenomeRNAi:6737 NextBio:26280
ArrayExpress:P19474 Bgee:P19474 CleanEx:HS_TRIM21
Genevestigator:P19474 GermOnline:ENSG00000132109 Uniprot:P19474
Length = 475
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGK-CPNCRQK 205
+CPIC+ P E S +CGH FC++CI G CP CRQ+
Sbjct: 15 TCPICLDPFVEPVSIECGHSFCQECISQVGKGGGSVCPVCRQR 57
>FB|FBgn0085337 [details] [associations]
symbol:CG34308 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 EMBL:AE014297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00390000014107 EMBL:BT029722
RefSeq:NP_001097770.1 UniGene:Dm.36040 SMR:A1A749
EnsemblMetazoa:FBtr0112504 GeneID:5740483 KEGG:dme:Dmel_CG34308
UCSC:CG34308-RA FlyBase:FBgn0085337 InParanoid:A1A749
NextBio:20891521 Uniprot:A1A749
Length = 108
Score = 95 (38.5 bits), Expect = 0.00017, P = 0.00017
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQ---GKCPNCRQKVGKRGIFRV 214
++C +CM + CGH FC CI I +Q KCP C+ +G+ + +
Sbjct: 32 YTCLVCMQTAESPRVSFCGHHFCSQCIYNWIRSQKYQAKCPYCQSLIGENTLITI 86
>UNIPROTKB|C9J3G7 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC139887 HOGENOM:HOG000231946
HGNC:HGNC:10066 ChiTaRS:PCGF3 EMBL:AC107464 IPI:IPI00878168
ProteinModelPortal:C9J3G7 SMR:C9J3G7 STRING:C9J3G7
Ensembl:ENST00000433814 ArrayExpress:C9J3G7 Bgee:C9J3G7
Uniprot:C9J3G7
Length = 109
Score = 95 (38.5 bits), Expect = 0.00017, P = 0.00017
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 164 SCPICMGPLSEATS-TKCGHIFCKDCIKGAIAAQGKCPNCR 203
+C +C G L +AT+ T+C H FC+ C+ + CP CR
Sbjct: 16 TCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCR 56
>UNIPROTKB|C9JYD0 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC139887 HGNC:HGNC:10066 ChiTaRS:PCGF3
EMBL:AC107464 IPI:IPI00879042 ProteinModelPortal:C9JYD0 SMR:C9JYD0
STRING:C9JYD0 Ensembl:ENST00000427463 ArrayExpress:C9JYD0
Bgee:C9JYD0 Uniprot:C9JYD0
Length = 62
Score = 95 (38.5 bits), Expect = 0.00017, P = 0.00017
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 164 SCPICMGPLSEATS-TKCGHIFCKDCIKGAIAAQGKCPNCR 203
+C +C G L +AT+ T+C H FC+ C+ + CP CR
Sbjct: 16 TCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCR 56
>UNIPROTKB|F1NWA3 [details] [associations]
symbol:F1NWA3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 GeneTree:ENSGT00440000033329
EMBL:AADN02028660 IPI:IPI00587294 Ensembl:ENSGALT00000006484
OMA:ILEAEGM Uniprot:F1NWA3
Length = 579
Score = 118 (46.6 bits), Expect = 0.00017, P = 0.00017
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 143 NKNDAAPLQ--LPQDPMAAAPTFSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCP 200
N+ + A + LP + + + C +C+ E +T CGH FCK+C++ + + CP
Sbjct: 264 NEEETAAMDNLLPLEELLSISDLECSLCIRMFFEPVTTPCGHTFCKECLERCLDHRPNCP 323
Query: 201 NCRQKVGKRGIFRVYLPTL 219
C+Q + + Y PT+
Sbjct: 324 LCKQSLREYLKAGSYSPTV 342
>UNIPROTKB|F1NQ64 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:PICFEMI
GeneTree:ENSGT00700000104377 EMBL:AADN02034166 IPI:IPI00602963
Ensembl:ENSGALT00000007170 Uniprot:F1NQ64
Length = 717
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKV 206
F CPIC + EA TKCGH FC CI ++ +CP C V
Sbjct: 120 FVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVV 163
>UNIPROTKB|Q8NHY2 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006977 "DNA damage response, signal
transduction by p53 class mediator resulting in cell cycle arrest"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829 GO:GO:0005813
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0006977
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0016874 GO:GO:0016607
GO:GO:0008270 eggNOG:COG2319 EMBL:CH471067 GO:GO:0005925
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 OMA:PICFEMI
EMBL:AF508940 EMBL:BK000438 EMBL:AF527539 EMBL:AY509921
EMBL:AK025789 EMBL:AK314750 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 EMBL:BC094728 IPI:IPI00171771
IPI:IPI00184865 IPI:IPI00431955 RefSeq:NP_001001740.1
RefSeq:NP_071902.2 UniGene:Hs.523744 ProteinModelPortal:Q8NHY2
SMR:Q8NHY2 IntAct:Q8NHY2 MINT:MINT-260162 STRING:Q8NHY2
PhosphoSite:Q8NHY2 DMDM:55976539 PaxDb:Q8NHY2 PRIDE:Q8NHY2
DNASU:64326 Ensembl:ENST00000308769 Ensembl:ENST00000367669
GeneID:64326 KEGG:hsa:64326 UCSC:uc001gku.1 UCSC:uc001gkv.1
UCSC:uc009wwv.2 CTD:64326 GeneCards:GC01M175913 HGNC:HGNC:17440
HPA:HPA028197 MIM:608067 neXtProt:NX_Q8NHY2 PharmGKB:PA134952161
HOVERGEN:HBG054995 InParanoid:Q8NHY2 OrthoDB:EOG4M0F18
ChiTaRS:RFWD2 GenomeRNAi:64326 NextBio:66247 ArrayExpress:Q8NHY2
Bgee:Q8NHY2 CleanEx:HS_RFWD2 Genevestigator:Q8NHY2
GermOnline:ENSG00000143207 Uniprot:Q8NHY2
Length = 731
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKV 206
F CPIC + EA TKCGH FC CI ++ +CP C V
Sbjct: 134 FVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVV 177
>UNIPROTKB|E2RRJ5 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 KO:K10143 OMA:PICFEMI
CTD:64326 GeneTree:ENSGT00700000104377 EMBL:AAEX03005193
EMBL:AAEX03005194 RefSeq:XP_537181.2 ProteinModelPortal:E2RRJ5
Ensembl:ENSCAFT00000022674 GeneID:480060 KEGG:cfa:480060
Uniprot:E2RRJ5
Length = 733
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKV 206
F CPIC + EA TKCGH FC CI ++ +CP C V
Sbjct: 136 FVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVV 179
>MGI|MGI:1347046 [details] [associations]
symbol:Rfwd2 "ring finger and WD repeat domain 2"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 UniPathway:UPA00143 MGI:MGI:1347046
Prosite:PS00518 GO:GO:0005737 GO:GO:0005813 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0016874 GO:GO:0016607 GO:GO:0008270 eggNOG:COG2319
GO:GO:0005925 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 OMA:PICFEMI
CTD:64326 HOVERGEN:HBG054995 OrthoDB:EOG4M0F18 ChiTaRS:RFWD2
EMBL:AF151110 EMBL:BC082804 IPI:IPI00621828 RefSeq:NP_036061.1
UniGene:Mm.328135 ProteinModelPortal:Q9R1A8 SMR:Q9R1A8
STRING:Q9R1A8 PhosphoSite:Q9R1A8 PaxDb:Q9R1A8 PRIDE:Q9R1A8
Ensembl:ENSMUST00000076894 GeneID:26374 KEGG:mmu:26374
UCSC:uc007ddz.1 GeneTree:ENSGT00700000104377 InParanoid:Q9R1A8
NextBio:304277 Bgee:Q9R1A8 CleanEx:MM_RFWD2 Genevestigator:Q9R1A8
GermOnline:ENSMUSG00000048949 Uniprot:Q9R1A8
Length = 733
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKV 206
F CPIC + EA TKCGH FC CI ++ +CP C V
Sbjct: 136 FVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVV 179
>UNIPROTKB|F1MHX1 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005925 "focal adhesion" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:PICFEMI
GeneTree:ENSGT00700000104377 EMBL:DAAA02043390 EMBL:DAAA02043391
EMBL:DAAA02043392 IPI:IPI00841834 UniGene:Bt.7449
Ensembl:ENSBTAT00000044452 ArrayExpress:F1MHX1 Uniprot:F1MHX1
Length = 735
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKV 206
F CPIC + EA TKCGH FC CI ++ +CP C V
Sbjct: 138 FVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVV 181
>UNIPROTKB|F1RZ46 [details] [associations]
symbol:TRIM40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00700000104499
OMA:HYKERLN EMBL:CU311184 Ensembl:ENSSSCT00000001347
Ensembl:ENSSSCT00000033688 Uniprot:F1RZ46
Length = 311
Score = 114 (45.2 bits), Expect = 0.00019, P = 0.00019
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 165 CPICMGPLSEATSTKCGHIFCKDCIK---GAIAAQG--KCPNCRQ 204
CPIC L EA ST CGH+FC+ C+ G +A G CP CR+
Sbjct: 14 CPICQEGLKEAVSTDCGHLFCRVCLAQHLGKASASGVLSCPLCRK 58
>UNIPROTKB|G4MVM5 [details] [associations]
symbol:MGG_08912 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043581 "mycelium development" evidence=IEP] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0043581
InterPro:IPR017907 EMBL:CM001232 RefSeq:XP_003713941.1
EnsemblFungi:MGG_08912T0 GeneID:2679898 KEGG:mgr:MGG_08912
Uniprot:G4MVM5
Length = 445
Score = 116 (45.9 bits), Expect = 0.00020, P = 0.00020
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 165 CPICMGPLSEATSTKCGHIFCKDCIKGAI---AAQGKCPNCRQKV 206
C ICM ++ TST CGH+FC C+ A+ A + CP CRQK+
Sbjct: 362 CSICMDDMTCLTSTHCGHLFCGGCLHSALHVNATKRVCPICRQKI 406
>UNIPROTKB|A5PJN7 [details] [associations]
symbol:BFAR "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001660 PROSITE:PS50089 PROSITE:PS50105 SMART:SM00184
SMART:SM00454 Prosite:PS00518 GO:GO:0016020 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 InterPro:IPR017907 CTD:51283
eggNOG:NOG251630 HOGENOM:HOG000285958 HOVERGEN:HBG056789 KO:K15684
OMA:FEDIQQN OrthoDB:EOG4N5VWT GeneTree:ENSGT00390000005386
EMBL:DAAA02057541 EMBL:BC142184 IPI:IPI00698967
RefSeq:NP_001092339.1 UniGene:Bt.9581 SMR:A5PJN7
Ensembl:ENSBTAT00000028683 GeneID:504902 KEGG:bta:504902
InParanoid:A5PJN7 NextBio:20866887 Uniprot:A5PJN7
Length = 450
Score = 116 (45.9 bits), Expect = 0.00020, P = 0.00020
Identities = 27/81 (33%), Positives = 41/81 (50%)
Query: 127 EATPDNCCINVDTSNNNKNDAAPLQLPQDPMAAAPTFSCPICMGPLSEATSTKCGHIFCK 186
E P N ++D ++ KN+ PL+ P + FSC C L T+ CGH FC+
Sbjct: 2 EECPQN---DLDAASLEKNE--PLE-STSPQISINEFSCHCCYDILVNPTTLNCGHSFCR 55
Query: 187 DCIK--GAIAAQGKCPNCRQK 205
C+ A + + +CP CR+K
Sbjct: 56 HCLALWWASSKKTECPECREK 76
>ZFIN|ZDB-GENE-040426-1640 [details] [associations]
symbol:zgc:66440 "zgc:66440" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-040426-1640 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00440000035370 EMBL:CR354433 IPI:IPI00919458
Ensembl:ENSDART00000128718 ArrayExpress:F1QUJ1 Bgee:F1QUJ1
Uniprot:F1QUJ1
Length = 384
Score = 115 (45.5 bits), Expect = 0.00021, P = 0.00021
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 165 CPICMGPLSEATST-KCGHIFCKDCIKGAIAAQGKCPNCRQKVGK 208
C ICMG + E T+ KCGH FC+ C++ A + CP CR G+
Sbjct: 201 CSICMGEMVEKTTLDKCGHAFCRSCLEQAFQVKKACPVCRLVYGQ 245
>UNIPROTKB|Q28DL4 [details] [associations]
symbol:traf6 "TNF receptor-associated factor 6"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0070534
"protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 GO:GO:0007165 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599
CTD:7189 eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248
KO:K03175 PANTHER:PTHR10131:SF48 EMBL:CR855449 EMBL:BC082342
RefSeq:NP_001008162.2 UniGene:Str.8271 ProteinModelPortal:Q28DL4
SMR:Q28DL4 STRING:Q28DL4 GeneID:493524 KEGG:xtr:493524
Xenbase:XB-GENE-480628 InParanoid:Q641J5 Uniprot:Q28DL4
Length = 558
Score = 117 (46.2 bits), Expect = 0.00022, P = 0.00022
Identities = 30/95 (31%), Positives = 42/95 (44%)
Query: 133 CCINVDTSNNNKNDAAPLQLPQ--------------DPMAAAPTFSCPICMGPLSEATST 178
CC+N + + +P PQ DP + + CPIC+ L EA T
Sbjct: 27 CCVNTKEDGESPSAGSPSGTPQSLVLEDVQGYDVEFDPPLESK-YECPICLMALREAVQT 85
Query: 179 KCGHIFCKDCIKGAIAAQG-KCPNCRQKVGKRGIF 212
CGH FCK CI +I G KCP + + + +F
Sbjct: 86 PCGHRFCKACILKSIRDAGHKCPVDNESLMENQLF 120
>UNIPROTKB|D4A9N5 [details] [associations]
symbol:Trim25 "Protein Trim25" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 RGD:1594396
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00700000104271
IPI:IPI00421577 Ensembl:ENSRNOT00000055674 ArrayExpress:D4A9N5
Uniprot:D4A9N5
Length = 468
Score = 116 (45.9 bits), Expect = 0.00022, P = 0.00022
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 160 APTFSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQG---KCPNCR 203
A SC IC+ P E +T CGH FC+ C+ QG +CP CR
Sbjct: 8 AEELSCSICLEPFKEPVTTPCGHNFCRSCLNETWVVQGPPYRCPQCR 54
>UNIPROTKB|E7EN90 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0007420 GO:GO:0032355 GO:GO:0005759
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0008270
GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000794 InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780
EMBL:AC135721 HGNC:HGNC:1100 ChiTaRS:BRCA1 GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 IPI:IPI00945744 SMR:E7EN90
Ensembl:ENST00000461221 Ensembl:ENST00000461798 Uniprot:E7EN90
Length = 63
Score = 93 (37.8 bits), Expect = 0.00029, P = 0.00029
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 165 CPICMGPLSEATSTKCGHIFCKDCI 189
CPIC+ + E STKC HIFCK C+
Sbjct: 24 CPICLELIKEPVSTKCDHIFCKFCM 48
>POMBASE|SPCC548.05c [details] [associations]
symbol:SPCC548.05c "ubiquitin-protein ligase E3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISM] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=ISO] [GO:0008270 "zinc
ion binding" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=ISM] [GO:0034080 "CENP-A containing nucleosome assembly at
centromere" evidence=ISO] [GO:0044732 "mitotic spindle pole body"
evidence=IDA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
PomBase:SPCC548.05c Prosite:PS00518 GO:GO:0005634 EMBL:CU329672
GO:GO:0044732 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006368 GO:GO:0004842 GO:GO:0034080
InterPro:IPR017907 OrthoDB:EOG4R53CF HSSP:Q9CQJ4 eggNOG:NOG260903
RefSeq:NP_587745.1 ProteinModelPortal:Q9P3U8
EnsemblFungi:SPCC548.05c.1 GeneID:2539314 KEGG:spo:SPCC548.05c
NextBio:20800479 Uniprot:Q9P3U8
Length = 468
Score = 115 (45.5 bits), Expect = 0.00029, P = 0.00029
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 162 TFSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKV 206
T CPIC L +T CGH +C +C+ + CP CRQK+
Sbjct: 82 TLECPICTEALQRPFTTHCGHTYCYECLLNWLKESKSCPTCRQKL 126
>DICTYBASE|DDB_G0269486 [details] [associations]
symbol:DDB_G0269486 species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 SMART:SM00320 dictyBase:DDB_G0269486
EMBL:AAFI02000005 Gene3D:2.130.10.10 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG249737 KO:K15691
RefSeq:XP_646004.1 ProteinModelPortal:Q55DX7
EnsemblProtists:DDB0190296 GeneID:8616952 KEGG:ddi:DDB_G0269486
InParanoid:Q55DX7 OMA:HINYQNE Uniprot:Q55DX7
Length = 1068
Score = 110 (43.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 164 SCPICMGPLS-----EATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRVYLPT 218
SCPIC +A + KCGHI+ + CI+ A+ + CP CR+K + + ++LPT
Sbjct: 541 SCPICFDYFHKQGSHQACTLKCGHIYGRSCIEKALLSNKICPLCRKKSYAKELIPLFLPT 600
Score = 51 (23.0 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 19/101 (18%), Positives = 41/101 (40%)
Query: 64 DDDLAIINQRIFAEAKNNSRRNHSQVVDQLRHVLTDAGGLLDSLQEVTDLAILYVKQRRN 123
+DD++ + F + +N+ N+ + ++ D + E L + + ++ N
Sbjct: 266 EDDISDLESLSFPDNNDNNPGNNPN--NPNNNITIDKDDNENRRHESPQLQLSSLVEKTN 323
Query: 124 RP--DEATPDNCCINVDTSNNNKNDAAPLQLPQDPMAAAPT 162
+N N T+++NKN+ +P P PT
Sbjct: 324 TSVSTHVNLNNIDDNTSTTSDNKNNNNTESVPATPSPVTPT 364
Score = 46 (21.3 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 16/67 (23%), Positives = 29/67 (43%)
Query: 81 NSRRNHSQVVDQLRHVLTDAGGLLDSLQ-EVTDLAILYVKQRRNRPDEATPDNCCINVDT 139
NS+ + S + ++ + D D L E D I+ + N + +N N +
Sbjct: 122 NSKNSASNYLPKV--YIEDVDFNFDDLSNEENDDPIIVINNNNNNNNNNNNNNNNNNNNN 179
Query: 140 SNNNKND 146
+NNN N+
Sbjct: 180 NNNNNNN 186
>RGD|1562137 [details] [associations]
symbol:Lonrf2 "LON peptidase N-terminal domain and ring finger
2" species:10116 "Rattus norvegicus" [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003111 InterPro:IPR011990
Pfam:PF02190 PROSITE:PS50089 SMART:SM00184 RGD:1562137
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
OMA:KVMCEVL OrthoDB:EOG4BK538 GeneTree:ENSGT00440000033329
IPI:IPI00362200 Ensembl:ENSRNOT00000033964 UCSC:RGD:1562137
Uniprot:D3ZX48
Length = 517
Score = 115 (45.5 bits), Expect = 0.00033, P = 0.00033
Identities = 27/95 (28%), Positives = 44/95 (46%)
Query: 121 RRNRPDEATPDNCCINVDTSNNNKN-DAAPLQ----LPQDPMAA--APTFSCPICMGPLS 173
+R P +A +N K+ D++P + L ++P A F C +CM L
Sbjct: 161 KRQLPSDAEDKELDVNTPEKIPKKDADSSPQRNANSLEEEPEFTIDATDFECALCMRLLF 220
Query: 174 EATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKVGK 208
E +T CGH FC C++ + CP C+ K+ +
Sbjct: 221 EPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSE 255
>RGD|1594396 [details] [associations]
symbol:Trim25 "tripartite motif-containing 25" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0030054
"cell junction" evidence=ISO] [GO:0033280 "response to vitamin D"
evidence=IEP] [GO:0043627 "response to estrogen stimulus"
evidence=IEP] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 RGD:1594396 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043627
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0033280
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 eggNOG:NOG307017 CTD:7706
HOVERGEN:HBG101063 KO:K10652 OrthoDB:EOG42JNRQ HOGENOM:HOG000132974
IPI:IPI00421577 EMBL:BC061749 RefSeq:NP_001009536.1
UniGene:Rn.34382 ProteinModelPortal:Q6P7B3 STRING:Q6P7B3
PRIDE:Q6P7B3 GeneID:494338 KEGG:rno:494338 NextBio:697600
Genevestigator:Q6P7B3 Uniprot:Q6P7B3
Length = 643
Score = 116 (45.9 bits), Expect = 0.00034, P = 0.00034
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 160 APTFSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQG---KCPNCR 203
A SC IC+ P E +T CGH FC+ C+ QG +CP CR
Sbjct: 8 AEELSCSICLEPFKEPVTTPCGHNFCRSCLNETWVVQGPPYRCPQCR 54
>UNIPROTKB|E9PSR5 [details] [associations]
symbol:Trim25 "Protein Trim25" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 RGD:1594396 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0030054 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 IPI:IPI00948826
Ensembl:ENSRNOT00000003186 ArrayExpress:E9PSR5 Uniprot:E9PSR5
Length = 643
Score = 116 (45.9 bits), Expect = 0.00034, P = 0.00034
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 160 APTFSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQG---KCPNCR 203
A SC IC+ P E +T CGH FC+ C+ QG +CP CR
Sbjct: 8 AEELSCSICLEPFKEPVTTPCGHNFCRSCLNETWVVQGPPYRCPQCR 54
>UNIPROTKB|A2BEC6 [details] [associations]
symbol:TRIM40 "Tripartite motif-containing protein 40"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX005441 EMBL:CR759838 UniGene:Hs.509439
HGNC:HGNC:18736 eggNOG:NOG263238 HOVERGEN:HBG057956 IPI:IPI00894114
SMR:A2BEC6 Ensembl:ENST00000418267 Ensembl:ENST00000456884
Uniprot:A2BEC6
Length = 229
Score = 109 (43.4 bits), Expect = 0.00036, P = 0.00036
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 165 CPICMGPLSEATSTKCGHIFCKDCIKGAI---AAQGK--CPNCRQ 204
CPIC L EA ST CGH+FC+ C+ + +A G CP CR+
Sbjct: 14 CPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRK 58
>UNIPROTKB|A9R9Q6 [details] [associations]
symbol:TRIM40 "Tripartite motif-containing protein 40"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CR753815 HGNC:HGNC:18736 eggNOG:NOG263238
HOVERGEN:HBG057956 IPI:IPI00893135 SMR:A9R9Q6
Ensembl:ENST00000445004 Uniprot:A9R9Q6
Length = 229
Score = 109 (43.4 bits), Expect = 0.00036, P = 0.00036
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 165 CPICMGPLSEATSTKCGHIFCKDCIKGAI---AAQGK--CPNCRQ 204
CPIC L EA ST CGH+FC+ C+ + +A G CP CR+
Sbjct: 14 CPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRK 58
>ZFIN|ZDB-GENE-041114-86 [details] [associations]
symbol:ftr72 "finTRIM family, member 72"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-041114-86 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOGENOM:HOG000234136
HOVERGEN:HBG106862 EMBL:BC085564 IPI:IPI00866697 UniGene:Dr.118348
ProteinModelPortal:Q5U3F5 eggNOG:NOG326605 InParanoid:Q5U3F5
OrthoDB:EOG4K6G6B NextBio:20865075 Uniprot:Q5U3F5
Length = 550
Score = 115 (45.5 bits), Expect = 0.00036, P = 0.00036
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKG--AIAAQG---KCPNCRQKVGKRGIFR 213
FSCP+C+ L E + CGH +C CI ++ QG +CP CR+ +R + +
Sbjct: 13 FSCPVCLDLLKEPVTIPCGHSYCMSCITDCWSLKEQGPPYRCPQCRESFSQRPLLK 68
>WB|WBGene00007008 [details] [associations]
symbol:rfp-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0031624
"ubiquitin conjugating enzyme binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0040007 GO:GO:0040010
GO:GO:0006915 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0040011 GO:GO:0016568 GO:GO:0016567 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0040025
InterPro:IPR017907 EMBL:FO081667 eggNOG:NOG263074 KO:K10696
GeneTree:ENSGT00390000002866 PIR:S44866 RefSeq:NP_001022699.1
RefSeq:NP_001022700.1 ProteinModelPortal:P34537 SMR:P34537
DIP:DIP-24823N IntAct:P34537 MINT:MINT-229204 STRING:P34537
PaxDb:P34537 PRIDE:P34537 EnsemblMetazoa:R05D3.4b GeneID:176180
KEGG:cel:CELE_R05D3.4 UCSC:R05D3.4b CTD:176180 WormBase:R05D3.4a
WormBase:R05D3.4b HOGENOM:HOG000095256 InParanoid:P34537
OMA:NGGISTH NextBio:891468 GO:GO:0006664 Uniprot:P34537
Length = 837
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 38/190 (20%), Positives = 73/190 (38%)
Query: 33 TDGNIATNSQEYPFDGHSDSRGDIGDCVEVIDDDLAIINQRIFAEAKNNSRRNHSQVVDQ 92
TD IA E+ + + + + V+ +L + + KN S+ +Q
Sbjct: 651 TDAQIA-KMHEFEKKANEELVTKLSESVQFKSAELTRLTNLMEQHRKNIQEVGMSRDENQ 709
Query: 93 LRHVLTDAGGLLDSLQEVTDLAILYVKQRRNRPDEATPDNCCINVDTSNNNKNDAAPLQL 152
++ + G + +QE+ ++ + + A + + + +N++ P Q
Sbjct: 710 IKADRCE--GQMKQIQELYAAKAREIEDFKFKRQRAEEELETLRIKYERVKRNESVPAQS 767
Query: 153 PQDPMAAA-----PTFSCPICMGPLSEATSTKCGHIFCKDCIKGAI-AAQGKCPNCRQKV 206
+ A T +CP C + KC H+FC+ CIK Q KCP C
Sbjct: 768 GDQVLEEANRQMKETLTCPSCKTRPKDCIMLKCYHLFCETCIKTMYDTRQRKCPKCNSNF 827
Query: 207 GKRGIFRVYL 216
G R+++
Sbjct: 828 GANDFHRIFI 837
>UNIPROTKB|P34537 [details] [associations]
symbol:rfp-1 "E3 ubiquitin-protein ligase bre-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0006664 "glycolipid metabolic process"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0040007 GO:GO:0040010
GO:GO:0006915 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0040011 GO:GO:0016568 GO:GO:0016567 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0040025
InterPro:IPR017907 EMBL:FO081667 eggNOG:NOG263074 KO:K10696
GeneTree:ENSGT00390000002866 PIR:S44866 RefSeq:NP_001022699.1
RefSeq:NP_001022700.1 ProteinModelPortal:P34537 SMR:P34537
DIP:DIP-24823N IntAct:P34537 MINT:MINT-229204 STRING:P34537
PaxDb:P34537 PRIDE:P34537 EnsemblMetazoa:R05D3.4b GeneID:176180
KEGG:cel:CELE_R05D3.4 UCSC:R05D3.4b CTD:176180 WormBase:R05D3.4a
WormBase:R05D3.4b HOGENOM:HOG000095256 InParanoid:P34537
OMA:NGGISTH NextBio:891468 GO:GO:0006664 Uniprot:P34537
Length = 837
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 38/190 (20%), Positives = 73/190 (38%)
Query: 33 TDGNIATNSQEYPFDGHSDSRGDIGDCVEVIDDDLAIINQRIFAEAKNNSRRNHSQVVDQ 92
TD IA E+ + + + + V+ +L + + KN S+ +Q
Sbjct: 651 TDAQIA-KMHEFEKKANEELVTKLSESVQFKSAELTRLTNLMEQHRKNIQEVGMSRDENQ 709
Query: 93 LRHVLTDAGGLLDSLQEVTDLAILYVKQRRNRPDEATPDNCCINVDTSNNNKNDAAPLQL 152
++ + G + +QE+ ++ + + A + + + +N++ P Q
Sbjct: 710 IKADRCE--GQMKQIQELYAAKAREIEDFKFKRQRAEEELETLRIKYERVKRNESVPAQS 767
Query: 153 PQDPMAAA-----PTFSCPICMGPLSEATSTKCGHIFCKDCIKGAI-AAQGKCPNCRQKV 206
+ A T +CP C + KC H+FC+ CIK Q KCP C
Sbjct: 768 GDQVLEEANRQMKETLTCPSCKTRPKDCIMLKCYHLFCETCIKTMYDTRQRKCPKCNSNF 827
Query: 207 GKRGIFRVYL 216
G R+++
Sbjct: 828 GANDFHRIFI 837
>UNIPROTKB|Q3MV19 [details] [associations]
symbol:traf6-a "TNF receptor-associated factor 6-A"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IDA] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907 GO:GO:0070534
SUPFAM:SSF49599 HOVERGEN:HBG060248 KO:K03175 PANTHER:PTHR10131:SF48
EMBL:AB100960 EMBL:BC108562 RefSeq:NP_001089863.1 UniGene:Xl.14682
ProteinModelPortal:Q3MV19 SMR:Q3MV19 GeneID:734929 KEGG:xla:734929
CTD:734929 Xenbase:XB-GENE-6254727 Uniprot:Q3MV19
Length = 556
Score = 115 (45.5 bits), Expect = 0.00037, P = 0.00037
Identities = 31/104 (29%), Positives = 45/104 (43%)
Query: 99 DAGGLLDSL-QEVTDLAILYVKQRRNRPDEATPDNCCINVDTSNNNKNDAAPLQLPQDPM 157
+AG D+ + + + K+ + P P N+D D + DP
Sbjct: 11 EAGDSEDACCAAMASVCCINTKEDADSPSAGLPSGTTQNLDVEEIQGYD-----VEFDPP 65
Query: 158 AAAPTFSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQG-KCP 200
+ + CPIC+ L EA T CGH FCK CI ++ G KCP
Sbjct: 66 LESK-YECPICLMALREAVQTPCGHRFCKACILKSLRNAGHKCP 108
>UNIPROTKB|E1C0T3 [details] [associations]
symbol:PDZRN3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0007528 "neuromuscular junction development" evidence=IEA]
[GO:0031594 "neuromuscular junction" evidence=IEA] Pfam:PF00595
InterPro:IPR001841 InterPro:IPR001478 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 PROSITE:PS50089
PROSITE:PS50106 PROSITE:PS51081 SMART:SM00184 SMART:SM00228
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0031594
Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50156 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 KO:K15682
GeneTree:ENSGT00510000046421 CTD:23024 OMA:IPVDECE
EMBL:AADN02014450 EMBL:AADN02014451 IPI:IPI00603818
RefSeq:XP_414432.2 UniGene:Gga.15903 ProteinModelPortal:E1C0T3
Ensembl:ENSGALT00000012692 GeneID:416099 KEGG:gga:416099
NextBio:20819608 Uniprot:E1C0T3
Length = 1060
Score = 118 (46.6 bits), Expect = 0.00037, P = 0.00037
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 161 PTFSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCP-NCRQKVGKRGIFRVYLPTL 219
P F C +C L + +T CGH+FC C+ + QG CP NC Q++ + + V LP
Sbjct: 14 PDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPANC-QRISAKELNHV-LPLK 71
Query: 220 S 220
S
Sbjct: 72 S 72
>ZFIN|ZDB-GENE-090508-13 [details] [associations]
symbol:ftr73 "finTRIM family, member 73"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-090508-13 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00670000097622
EMBL:CR853294 IPI:IPI00770279 Ensembl:ENSDART00000147469
Uniprot:E9QBF8
Length = 562
Score = 115 (45.5 bits), Expect = 0.00037, P = 0.00037
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKG--AIAAQG---KCPNCRQKVGKRGIFR 213
FSCP+C+ L E + CGH +C CI ++ QG +CP CR+ +R + +
Sbjct: 13 FSCPVCLDLLKEPVTIPCGHSYCMSCITDCWSLKEQGPPYRCPQCRESFSQRPLLK 68
>UNIPROTKB|F1NHH0 [details] [associations]
symbol:RNF185 "E3 ubiquitin-protein ligase RNF185"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000014107
EMBL:AADN02043215 EMBL:AADN02043216 IPI:IPI00590225
Ensembl:ENSGALT00000011275 ArrayExpress:F1NHH0 Uniprot:F1NHH0
Length = 117
Score = 92 (37.4 bits), Expect = 0.00037, P = 0.00037
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 162 TFSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGK---CPNCRQKVGKRGIFRVY 215
TF C IC+ +A + CGH+FC C+ + + CP C+ + + + +Y
Sbjct: 1 TFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLY 57
>UNIPROTKB|G4NGM3 [details] [associations]
symbol:MGG_04088 "Anaphase-promoting complex subunit 11"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001841
InterPro:IPR024991 Pfam:PF12861 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0005680 KO:K03358
EMBL:CM001236 RefSeq:XP_003719750.1 ProteinModelPortal:G4NGM3
EnsemblFungi:MGG_04088T0 GeneID:2677680 KEGG:mgr:MGG_04088
Uniprot:G4NGM3
Length = 104
Score = 92 (37.4 bits), Expect = 0.00037, P = 0.00037
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 164 SCPICMGPLSEAT--STKCGHIFCKDCIKGAI---AAQGKCPNCRQK 205
+CP C P + + S KCGH F CI I +A+G+CP CRQK
Sbjct: 34 TCPTCKYPGDDCSLLSGKCGHNFHMHCILEWIKQDSAKGQCPMCRQK 80
>MGI|MGI:106657 [details] [associations]
symbol:Trim21 "tripartite motif-containing 21" species:10090
"Mus musculus" [GO:0000209 "protein polyubiquitination"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006513 "protein monoubiquitination"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=ISO] [GO:0045787 "positive regulation of cell cycle"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=ISO] [GO:0070206
"protein trimerization" evidence=ISO] [GO:0090086 "negative
regulation of protein deubiquitination" evidence=ISO]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
InterPro:IPR020457 Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 MGI:MGI:106657 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003723 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0007049
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0032088
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0051865
GO:GO:0045787 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 GO:GO:0031648 GO:GO:0006513 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 GO:GO:0090086
eggNOG:NOG276395 HOVERGEN:HBG001357 OrthoDB:EOG4KWJSP EMBL:L27990
IPI:IPI00331738 UniGene:Mm.321227 PDB:2VOK PDB:2VOL PDBsum:2VOK
PDBsum:2VOL ProteinModelPortal:Q62191 SMR:Q62191 STRING:Q62191
PhosphoSite:Q62191 PRIDE:Q62191 HOGENOM:HOG000234134
InParanoid:Q62191 EvolutionaryTrace:Q62191 CleanEx:MM_TRIM21
Genevestigator:Q62191 GermOnline:ENSMUSG00000030966 Uniprot:Q62191
Length = 470
Score = 114 (45.2 bits), Expect = 0.00038, P = 0.00038
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQG--KCPNCRQK 205
+C IC+ P+ E S +CGH FCK+CI + G CP CRQ+
Sbjct: 19 TCSICLDPMVEPMSIECGHCFCKECIF-EVGKNGGSSCPECRQQ 61
>UNIPROTKB|I3LJN8 [details] [associations]
symbol:DTX3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00440000035370
Ensembl:ENSSSCT00000029673 OMA:ETSDICE Uniprot:I3LJN8
Length = 337
Score = 112 (44.5 bits), Expect = 0.00038, P = 0.00038
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 149 PLQLPQDPMAAAPTFSCPICMGPLSEA-TSTKCGHIFCKDCIKGAIAAQGKCPNCRQKVG 207
P +L ++P T CPIC+G + A T KC H FC+ CI A+ + CP C + G
Sbjct: 140 PPRLREEPEEQEST--CPICLGEIQNAKTLEKCRHSFCEGCITRALQVKKACPMCGRFYG 197
Query: 208 K 208
+
Sbjct: 198 Q 198
>RGD|1305795 [details] [associations]
symbol:Trim21 "tripartite motif-containing 21" species:10116
"Rattus norvegicus" [GO:0000209 "protein polyubiquitination"
evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006513 "protein
monoubiquitination" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA;ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA;ISO] [GO:0045787
"positive regulation of cell cycle" evidence=IEA;ISO] [GO:0051865
"protein autoubiquitination" evidence=IEA;ISO] [GO:0070206 "protein
trimerization" evidence=IEA;ISO] [GO:0090086 "negative regulation
of protein deubiquitination" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 InterPro:IPR020457 Pfam:PF00622 Pfam:PF00643
PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 RGD:1305795 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0019005
GO:GO:0032088 GO:GO:0004842 GO:GO:0000209 GO:GO:0070206
InterPro:IPR017907 GO:GO:0051865 GO:GO:0045787 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0031648
GO:GO:0006513 InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407
SMART:SM00589 GO:GO:0090086 GeneTree:ENSGT00690000101646
OrthoDB:EOG4KWJSP IPI:IPI00359044 Ensembl:ENSRNOT00000024992
UCSC:RGD:1305795 Uniprot:D4ACF2
Length = 474
Score = 114 (45.2 bits), Expect = 0.00038, P = 0.00038
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCIKGAIA-AQGKCPNCRQ 204
+C IC+ P+ E S +CGH FCK+CI G CP CRQ
Sbjct: 19 TCSICLEPMVEPMSIECGHCFCKECISEVGGNGGGSCPVCRQ 60
>UNIPROTKB|I3LT33 [details] [associations]
symbol:LONRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR013105
Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
GO:GO:0004176 GeneTree:ENSGT00440000033329 EMBL:CU638828
Ensembl:ENSSSCT00000027883 Uniprot:I3LT33
Length = 717
Score = 116 (45.9 bits), Expect = 0.00039, P = 0.00039
Identities = 37/148 (25%), Positives = 64/148 (43%)
Query: 59 CVEVIDDDLAIINQRIFAEAKNNSRRNHSQVVDQLRHVLTDAGGLLDSLQEVTDLAILYV 118
C V+D+ + + +E S N +Q + TD D L+ V+ +L V
Sbjct: 330 CPSVMDESHSAKIAEVTSEPVKGSL-NRAQSAQAINS--TDMPVREDCLKRVSSEPLLSV 386
Query: 119 KQRRNRPDEATPDNCCINVDTSNNNKNDAAPLQLPQDPMAAAPTFSCPICMGPLSEATST 178
+++ TP C T + D +P++ + A F C +CM E +T
Sbjct: 387 QEKGVLLKIETPSEVC----TFSLTCGD-----IPEE-LIDASDFECSLCMRLFFEPVTT 436
Query: 179 KCGHIFCKDCIKGAIAAQGKCPNCRQKV 206
CGH FCK+C++ + CP C++ +
Sbjct: 437 PCGHSFCKNCLERCLDHTPYCPLCKESL 464
>UNIPROTKB|F1SKF4 [details] [associations]
symbol:DTX3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0007219 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00440000035370
OMA:GPQLCDS EMBL:FP016095 Ensembl:ENSSSCT00000000484 Uniprot:F1SKF4
Length = 346
Score = 112 (44.5 bits), Expect = 0.00040, P = 0.00040
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 149 PLQLPQDPMAAAPTFSCPICMGPLSEA-TSTKCGHIFCKDCIKGAIAAQGKCPNCRQKVG 207
P +L ++P T CPIC+G + A T KC H FC+ CI A+ + CP C + G
Sbjct: 149 PPRLREEPEEQEST--CPICLGEIQNAKTLEKCRHSFCEGCITRALQVKKACPMCGRFYG 206
Query: 208 K 208
+
Sbjct: 207 Q 207
>UNIPROTKB|J3QKM8 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HGNC:HGNC:17765 EMBL:AC011825 Ensembl:ENST00000580499
Uniprot:J3QKM8
Length = 142
Score = 99 (39.9 bits), Expect = 0.00043, P = 0.00043
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 163 FSCPICMGPL-SEATSTKCGHIFCKDCIKGAIAAQGK-CPNCRQKVGKR 209
F CP+C L + +T C H+FC+ C A+ G CP CR V +R
Sbjct: 16 FYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGNVTRR 64
>UNIPROTKB|F1LUN6 [details] [associations]
symbol:F1LUN6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
IPI:IPI00562660 Ensembl:ENSRNOT00000032989 Uniprot:F1LUN6
Length = 167
Score = 104 (41.7 bits), Expect = 0.00043, P = 0.00043
Identities = 23/52 (44%), Positives = 26/52 (50%)
Query: 152 LPQDPMAAAPTFSCPICMGPLSEA-TSTKCGHIFCKDCIKGAIAAQGKCPNC 202
LP M P SC IC G L +A T T+C H FCK CI +CP C
Sbjct: 47 LPLSEMI--PYISCSICKGYLIDAATITECLHTFCKSCIVKHFEHSNRCPKC 96
>UNIPROTKB|F1N9A6 [details] [associations]
symbol:RNF20 "E3 ubiquitin-protein ligase BRE1A"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0002039 "p53 binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA] [GO:0030336 "negative regulation of cell migration"
evidence=IEA] [GO:0031062 "positive regulation of histone
methylation" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0033503 "HULC complex" evidence=IEA]
[GO:0033523 "histone H2B ubiquitination" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0030336
GO:GO:0003713 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0033523
GO:GO:0010390 GeneTree:ENSGT00390000002866 OMA:KQDSEDL
GO:GO:0033503 IPI:IPI00593729 EMBL:AADN02074604 EMBL:AADN02074605
EMBL:AADN02074606 EMBL:AADN02074607 EMBL:AADN02074608
Ensembl:ENSGALT00000025065 Uniprot:F1N9A6
Length = 984
Score = 117 (46.2 bits), Expect = 0.00045, P = 0.00044
Identities = 39/158 (24%), Positives = 61/158 (38%)
Query: 64 DDDLAIINQRIFAEAKNNSRRNHSQVVDQLRHVLTDAGGLLDSLQ-EVTDLAILYVKQRR 122
+ +L + Q + E + +Q+ D L+ L A L Q E+ + + K+
Sbjct: 829 EKELGLRTQAL--EMNKRKAMDAAQLADDLKTQLELAQKKLHDFQDEIVESRVTREKEMF 886
Query: 123 NRPDEATPDNCCINVDTSNNNKNDAAPLQ---LPQDPMAAAPTFSCPICMGPLSEATSTK 179
N A D + K D P L ++ +CP C +A TK
Sbjct: 887 NFK-RAEEDISRLRRKLETTKKPDMVPNCDEILMEEIKDYKARLTCPCCNMRKKDAVLTK 945
Query: 180 CGHIFCKDCIKGAI-AAQGKCPNCRQKVGKRGIFRVYL 216
C H+FC +C+K Q KCP C G R+Y+
Sbjct: 946 CFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYI 983
>UNIPROTKB|Q5ZLS3 [details] [associations]
symbol:RNF20 "E3 ubiquitin-protein ligase BRE1A"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0033503 "HULC complex" evidence=ISS] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:NOG263074 KO:K10696 CTD:56254
HOGENOM:HOG000231526 HOVERGEN:HBG080312 OrthoDB:EOG49W2DV
GO:GO:0033503 EMBL:AJ719661 IPI:IPI00593729 RefSeq:NP_001026605.1
UniGene:Gga.42047 ProteinModelPortal:Q5ZLS3 STRING:Q5ZLS3
PRIDE:Q5ZLS3 GeneID:427310 KEGG:gga:427310 InParanoid:Q5ZLS3
NextBio:20828591 Uniprot:Q5ZLS3
Length = 984
Score = 117 (46.2 bits), Expect = 0.00045, P = 0.00044
Identities = 39/158 (24%), Positives = 61/158 (38%)
Query: 64 DDDLAIINQRIFAEAKNNSRRNHSQVVDQLRHVLTDAGGLLDSLQ-EVTDLAILYVKQRR 122
+ +L + Q + E + +Q+ D L+ L A L Q E+ + + K+
Sbjct: 829 EKELGLRTQAL--EMNKRKAMDAAQLADDLKTQLELAQKKLHDFQDEIVESRVTREKEMF 886
Query: 123 NRPDEATPDNCCINVDTSNNNKNDAAPLQ---LPQDPMAAAPTFSCPICMGPLSEATSTK 179
N A D + K D P L ++ +CP C +A TK
Sbjct: 887 NFK-RAEEDISRLRRKLETTKKPDMVPNCDEILMEEIKDYKARLTCPCCNMRKKDAVLTK 945
Query: 180 CGHIFCKDCIKGAI-AAQGKCPNCRQKVGKRGIFRVYL 216
C H+FC +C+K Q KCP C G R+Y+
Sbjct: 946 CFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYI 983
>ASPGD|ASPL0000057529 [details] [associations]
symbol:AN10006 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:BN001308 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EnsemblFungi:CADANIAT00002715 HOGENOM:HOG000234991 Uniprot:C8VRE2
Length = 192
Score = 106 (42.4 bits), Expect = 0.00047, P = 0.00047
Identities = 25/77 (32%), Positives = 35/77 (45%)
Query: 144 KNDAAPLQLPQD---PMAAAPTFSCPICMGPLSEATSTKCGHIFCKDCI----------- 189
+ DA Q D + ++CP+CM +AT+T CGH+FC CI
Sbjct: 80 REDAVAAQQSNDGGNARSRLTAYTCPVCMETPKDATATICGHLFCHKCIMEWLATTEEQR 139
Query: 190 --KGAIAAQGKCPNCRQ 204
+ A +G CP CRQ
Sbjct: 140 ADRAGKAPRGLCPQCRQ 156
>UNIPROTKB|Q6DJN2 [details] [associations]
symbol:traf6-b "TNF receptor-associated factor 6-B"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IDA] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907 GO:GO:0070534
SUPFAM:SSF49599 HOVERGEN:HBG060248 KO:K03175 PANTHER:PTHR10131:SF48
EMBL:BC075143 RefSeq:NP_001086348.1 UniGene:Xl.29694
ProteinModelPortal:Q6DJN2 SMR:Q6DJN2 GeneID:444777 KEGG:xla:444777
CTD:444777 Xenbase:XB-GENE-865394 Uniprot:Q6DJN2
Length = 556
Score = 114 (45.2 bits), Expect = 0.00048, P = 0.00048
Identities = 29/83 (34%), Positives = 38/83 (45%)
Query: 133 CCINVDTSNNNKNDAAPLQLPQ--------------DPMAAAPTFSCPICMGPLSEATST 178
CC+N ++ + A P PQ DP + + CPIC+ L EA T
Sbjct: 27 CCLNTKEDCDSPSTALPSGTPQSLEVEEVQGYDVEFDPPLESK-YECPICLMALREAVQT 85
Query: 179 KCGHIFCKDCIKGAIAAQG-KCP 200
CGH FCK CI ++ G KCP
Sbjct: 86 PCGHRFCKACIVKSLRDAGHKCP 108
>UNIPROTKB|A2AE50 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL662832
EMBL:AL844220 EMBL:BX927221 EMBL:CR759838 EMBL:CR788282
EMBL:BX248419 EMBL:CR388382 EMBL:BX927189 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00642517
SMR:A2AE50 Ensembl:ENST00000427612 Ensembl:ENST00000429583
Ensembl:ENST00000431641 Ensembl:ENST00000434785
Ensembl:ENST00000435387 Ensembl:ENST00000440149
Ensembl:ENST00000445457 Ensembl:ENST00000447942
HOGENOM:HOG000060139 HOVERGEN:HBG084408 Uniprot:A2AE50
Length = 122
Score = 91 (37.1 bits), Expect = 0.00048, P = 0.00048
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGK---CPNCRQKVGKRGIFRVY 215
+C IC+ L + + CGH+FC+ C G CP C++ K I V+
Sbjct: 15 TCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENIRPVW 69
>UNIPROTKB|C9JWN8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HOGENOM:HOG000234134 HGNC:HGNC:16276 ChiTaRS:TRIM5
EMBL:AC109341 IPI:IPI00749246 ProteinModelPortal:C9JWN8 SMR:C9JWN8
STRING:C9JWN8 Ensembl:ENST00000419850 ArrayExpress:C9JWN8
Bgee:C9JWN8 Uniprot:C9JWN8
Length = 72
Score = 91 (37.1 bits), Expect = 0.00048, P = 0.00048
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCI----KGAIAAQGK--CPNCR 203
+CPIC+ L++ S CGH FC+ C+ K ++ +G+ CP CR
Sbjct: 14 TCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCR 59
>MGI|MGI:2685640 [details] [associations]
symbol:Trim75 "tripartite motif-containing 75" species:10090
"Mus musculus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 MGI:MGI:2685640 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HSSP:Q9CQJ4 HOGENOM:HOG000234133 HOVERGEN:HBG001357
GeneTree:ENSGT00700000104307 OrthoDB:EOG4NP73C eggNOG:NOG254111
EMBL:AK136018 IPI:IPI00339960 RefSeq:NP_001028601.1
UniGene:Mm.334557 ProteinModelPortal:Q3UWZ0 SMR:Q3UWZ0 PRIDE:Q3UWZ0
Ensembl:ENSMUST00000095295 GeneID:333307 KEGG:mmu:333307 CTD:391714
InParanoid:Q3UWZ0 KO:K12037 OMA:NILVETI NextBio:399957 Bgee:Q3UWZ0
Genevestigator:Q3UWZ0 Uniprot:Q3UWZ0
Length = 467
Score = 113 (44.8 bits), Expect = 0.00048, P = 0.00048
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 165 CPICMGPLSEATSTKCGHIFCKDCIKGAIAAQ---GKCPNCRQKVGKRGI 211
CPIC+ L++ + +CGH FC+ CIK A Q CP CR + R +
Sbjct: 16 CPICLDDLTDPVTVECGHNFCRSCIKDFWAGQQATSSCPVCRHQCQHRNL 65
>UNIPROTKB|A2BEC5 [details] [associations]
symbol:TRIM40 "Tripartite motif-containing protein 40"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX005441 EMBL:CR759838 UniGene:Hs.509439
HGNC:HGNC:18736 eggNOG:NOG263238 HOVERGEN:HBG057956
OrthoDB:EOG4W9J4P IPI:IPI00894215 SMR:A2BEC5
Ensembl:ENST00000425845 Ensembl:ENST00000430485 UCSC:uc011hla.1
Uniprot:A2BEC5
Length = 258
Score = 109 (43.4 bits), Expect = 0.00049, P = 0.00049
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 165 CPICMGPLSEATSTKCGHIFCKDCIKGAI---AAQGK--CPNCRQ 204
CPIC L EA ST CGH+FC+ C+ + +A G CP CR+
Sbjct: 14 CPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRK 58
>UNIPROTKB|A9R9Q5 [details] [associations]
symbol:TRIM40 "Tripartite motif-containing protein 40"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CR753815 HGNC:HGNC:18736 HOVERGEN:HBG057956
OrthoDB:EOG4W9J4P IPI:IPI00893026 SMR:A9R9Q5
Ensembl:ENST00000431397 Ensembl:ENST00000548672 UCSC:uc011fvq.1
Uniprot:A9R9Q5
Length = 258
Score = 109 (43.4 bits), Expect = 0.00049, P = 0.00049
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 165 CPICMGPLSEATSTKCGHIFCKDCIKGAI---AAQGK--CPNCRQ 204
CPIC L EA ST CGH+FC+ C+ + +A G CP CR+
Sbjct: 14 CPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRK 58
>UNIPROTKB|Q6P9F5 [details] [associations]
symbol:TRIM40 "Tripartite motif-containing protein 40"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 Prosite:PS00518 EMBL:CH471081
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL669914 EMBL:AL671859
EMBL:BX927221 EMBL:CR788282 EMBL:BX322644 EMBL:AF489517
EMBL:AB110939 EMBL:AB110940 EMBL:AB202084 EMBL:BC060785
IPI:IPI00152496 IPI:IPI00477194 RefSeq:NP_619645.1
UniGene:Hs.509439 ProteinModelPortal:Q6P9F5 SMR:Q6P9F5
STRING:Q6P9F5 PhosphoSite:Q6P9F5 DMDM:229463021 PRIDE:Q6P9F5
DNASU:135644 Ensembl:ENST00000307859 Ensembl:ENST00000376724
Ensembl:ENST00000383610 Ensembl:ENST00000396581
Ensembl:ENST00000400651 Ensembl:ENST00000421981
Ensembl:ENST00000429471 Ensembl:ENST00000433713
Ensembl:ENST00000434151 Ensembl:ENST00000436951
Ensembl:ENST00000437563 Ensembl:ENST00000547289
Ensembl:ENST00000549728 Ensembl:ENST00000552119 GeneID:135644
KEGG:hsa:135644 UCSC:uc003npk.2 CTD:135644 GeneCards:GC06P030103
HGNC:HGNC:18736 HPA:HPA043818 neXtProt:NX_Q6P9F5 PharmGKB:PA38663
eggNOG:NOG263238 HOGENOM:HOG000060264 HOVERGEN:HBG057956
InParanoid:Q6P9F5 KO:K12016 OMA:HYKERLN OrthoDB:EOG4W9J4P
GenomeRNAi:135644 NextBio:83494 ArrayExpress:Q6P9F5 Bgee:Q6P9F5
CleanEx:HS_TRIM40 Genevestigator:Q6P9F5 GermOnline:ENSG00000204614
Uniprot:Q6P9F5
Length = 258
Score = 109 (43.4 bits), Expect = 0.00049, P = 0.00049
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 165 CPICMGPLSEATSTKCGHIFCKDCIKGAI---AAQGK--CPNCRQ 204
CPIC L EA ST CGH+FC+ C+ + +A G CP CR+
Sbjct: 14 CPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRK 58
>UNIPROTKB|Q3B891 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0007420 GO:GO:0032355
GO:GO:0005759 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000794 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820 EMBL:AC060780
EMBL:AC135721 UniGene:Hs.194143 HGNC:HGNC:1100 ChiTaRS:BRCA1
GO:GO:0043009 GO:GO:0009048 GO:GO:0007098 HOGENOM:HOG000142477
HOVERGEN:HBG061757 EMBL:BC106745 IPI:IPI00946108 SMR:Q3B891
STRING:Q3B891 Ensembl:ENST00000494123 Uniprot:Q3B891
Length = 473
Score = 113 (44.8 bits), Expect = 0.00049, P = 0.00049
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 165 CPICMGPLSEATSTKCGHIFCKDC-IKGAIAAQG--KCPNCRQKVGKRGI 211
CPIC+ + E STKC HIFCK C +K +G +CP C+ + KR +
Sbjct: 24 CPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSL 73
>FB|FBgn0035233 [details] [associations]
symbol:Pex10 "Peroxin 10" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005779 "integral to peroxisomal membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0048137
"spermatocyte division" evidence=IMP] [GO:0007286 "spermatid
development" evidence=IMP] [GO:0007285 "primary spermatocyte
growth" evidence=IMP] [GO:0007112 "male meiosis cytokinesis"
evidence=IMP] InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089
SMART:SM00184 InterPro:IPR006845 Prosite:PS00518 EMBL:AE014296
GO:GO:0007286 GO:GO:0046872 GO:GO:0008270 GO:GO:0005779
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558 GO:GO:0007112
InterPro:IPR017907 GO:GO:0048137 GO:GO:0007285 eggNOG:COG5574
KO:K13346 OMA:FRQRQRA PANTHER:PTHR23350 Pfam:PF04757 CTD:5192
GeneTree:ENSGT00510000048446 EMBL:AY069290 RefSeq:NP_647624.1
UniGene:Dm.2194 SMR:Q9W0D7 IntAct:Q9W0D7 MINT:MINT-1647351
EnsemblMetazoa:FBtr0072743 EnsemblMetazoa:FBtr0333397 GeneID:38182
KEGG:dme:Dmel_CG7864 UCSC:CG7864-RA FlyBase:FBgn0035233
InParanoid:Q9W0D7 OrthoDB:EOG4ZS7K2 GenomeRNAi:38182 NextBio:807389
Uniprot:Q9W0D7
Length = 299
Score = 110 (43.8 bits), Expect = 0.00051, P = 0.00051
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 162 TFSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKVGK 208
T C +C+ P S+++ T CGHIFC C+ + + +CP CR+ + K
Sbjct: 243 TPQCILCLEPRSDSSLTPCGHIFCWSCLLEWLEERDECPLCRESLKK 289
>UNIPROTKB|Q14258 [details] [associations]
symbol:TRIM25 "E3 ubiquitin/ISG15 ligase TRIM25"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030054 "cell junction" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_6900 GO:GO:0019048 GO:GO:0046872
GO:GO:0030054 GO:GO:0008270 GO:GO:0045087 GO:GO:0003700
GO:GO:0051607 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
GO:GO:0032480 InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407
SMART:SM00589 EMBL:D21205 EMBL:AC015912 EMBL:BC016924 EMBL:BC042541
IPI:IPI00029629 PIR:A49656 RefSeq:NP_005073.2 UniGene:Hs.528952
ProteinModelPortal:Q14258 SMR:Q14258 IntAct:Q14258 STRING:Q14258
PhosphoSite:Q14258 DMDM:12585547 PaxDb:Q14258 PeptideAtlas:Q14258
PRIDE:Q14258 Ensembl:ENST00000316881 Ensembl:ENST00000537230
GeneID:7706 KEGG:hsa:7706 UCSC:uc002iut.3 CTD:7706
GeneCards:GC17M054965 HGNC:HGNC:12932 HPA:HPA005909 MIM:600453
neXtProt:NX_Q14258 PharmGKB:PA37519 eggNOG:NOG253760
HOVERGEN:HBG101063 InParanoid:Q14258 KO:K10652 OMA:SHINGAT
OrthoDB:EOG42JNRQ PhylomeDB:Q14258 ChiTaRS:TRIM25 GenomeRNAi:7706
NextBio:29876 ArrayExpress:Q14258 Bgee:Q14258 CleanEx:HS_TRIM25
Genevestigator:Q14258 GermOnline:ENSG00000121060 Uniprot:Q14258
Length = 630
Score = 114 (45.2 bits), Expect = 0.00057, P = 0.00057
Identities = 21/47 (44%), Positives = 24/47 (51%)
Query: 160 APTFSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGK---CPNCR 203
A SC IC+ P E +T CGH FC C+ A QG CP CR
Sbjct: 8 AEELSCSICLEPFKEPVTTPCGHNFCGSCLNETWAVQGSPYLCPQCR 54
>UNIPROTKB|A2VDP1 [details] [associations]
symbol:RNF20 "E3 ubiquitin-protein ligase BRE1A"
species:9913 "Bos taurus" [GO:0033503 "HULC complex" evidence=ISS]
[GO:0000209 "protein polyubiquitination" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0010390 "histone monoubiquitination" evidence=ISS] [GO:0030336
"negative regulation of cell migration" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0033523 "histone H2B ubiquitination" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0002039 "p53 binding" evidence=ISS] [GO:0003713 "transcription
coactivator activity" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0031625 "ubiquitin protein
ligase binding" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0000151 "ubiquitin ligase complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0031062 "positive
regulation of histone methylation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0045893 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0030336 GO:GO:0003713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
GO:GO:0042393 GO:GO:0000209 InterPro:IPR017907 GO:GO:0031625
GO:GO:0002039 eggNOG:NOG263074 KO:K10696 GO:GO:0033523
GO:GO:0010390 EMBL:BC133334 IPI:IPI00690596 RefSeq:NP_001075056.1
UniGene:Bt.10397 ProteinModelPortal:A2VDP1 PRIDE:A2VDP1
Ensembl:ENSBTAT00000012521 GeneID:513326 KEGG:bta:513326 CTD:56254
GeneTree:ENSGT00390000002866 HOGENOM:HOG000231526
HOVERGEN:HBG080312 InParanoid:A2VDP1 OMA:KQDSEDL OrthoDB:EOG49W2DV
NextBio:20870814 ArrayExpress:A2VDP1 GO:GO:0033503 Uniprot:A2VDP1
Length = 975
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 39/158 (24%), Positives = 60/158 (37%)
Query: 64 DDDLAIINQRIFAEAKNNSRRNHSQVVDQLRHVLTDAGGLLDSLQ-EVTDLAILYVKQRR 122
+ +L + Q + E +Q+ D L+ L A L Q E+ + ++ K
Sbjct: 820 EKELGLRTQAL--EMNKRKAMEAAQLADDLKAQLEMAQKKLHDFQDEIVENSVTKEKDMF 877
Query: 123 NRPDEATPDNCCINVDTSNNNKNDAAPLQ---LPQDPMAAAPTFSCPICMGPLSEATSTK 179
N A D + K D P L ++ +CP C +A TK
Sbjct: 878 NFK-RAQEDISRLRRKLETTKKPDNVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTK 936
Query: 180 CGHIFCKDCIKGAI-AAQGKCPNCRQKVGKRGIFRVYL 216
C H+FC +C+K Q KCP C G R+Y+
Sbjct: 937 CFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYI 974
>RGD|1306853 [details] [associations]
symbol:Traf6 "TNF receptor-associated factor 6, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0001503 "ossification"
evidence=IEA;ISO] [GO:0001843 "neural tube closure"
evidence=IEA;ISO] [GO:0002726 "positive regulation of T cell
cytokine production" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005811
"lipid particle" evidence=ISO;ISS] [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005938 "cell cortex" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IMP] [GO:0006955 "immune response"
evidence=ISO] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA;ISO] [GO:0007254 "JNK cascade" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=ISO] [GO:0009898 "internal side of plasma
membrane" evidence=IEA;ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=IMP] [GO:0019886 "antigen processing and presentation of
exogenous peptide antigen via MHC class II" evidence=IEA;ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030316
"osteoclast differentiation" evidence=IEA;ISO] [GO:0031435
"mitogen-activated protein kinase kinase kinase binding"
evidence=IEA;ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA;ISO] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA;ISO]
[GO:0031965 "nuclear membrane" evidence=IEA;ISO] [GO:0031996
"thioesterase binding" evidence=IEA;ISO] [GO:0032147 "activation of
protein kinase activity" evidence=ISO] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IEA;ISO]
[GO:0035631 "CD40 receptor complex" evidence=IEA;ISO] [GO:0042088
"T-helper 1 type immune response" evidence=IEA;ISO] [GO:0042102
"positive regulation of T cell proliferation" evidence=IEA;ISO]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043011 "myeloid dendritic cell differentiation"
evidence=IEA;ISO] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0043234 "protein
complex" evidence=IMP] [GO:0043422 "protein kinase B binding"
evidence=IEA;ISO] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IEA;ISO] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IEA;ISO] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IEA;ISO] [GO:0045453 "bone resorption" evidence=IEA;ISO]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0046849 "bone remodeling" evidence=ISO]
[GO:0047485 "protein N-terminus binding" evidence=IEA;ISO]
[GO:0048468 "cell development" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048661
"positive regulation of smooth muscle cell proliferation"
evidence=IMP] [GO:0050852 "T cell receptor signaling pathway"
evidence=IEA;ISO] [GO:0051023 "regulation of immunoglobulin
secretion" evidence=IEA;ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA;ISO] [GO:0051865
"protein autoubiquitination" evidence=IEA;ISO] [GO:0070498
"interleukin-1-mediated signaling pathway" evidence=ISO;IMP]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO;ISS]
[GO:0070555 "response to interleukin-1" evidence=ISO] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
RGD:1306853 Prosite:PS00518 GO:GO:0005829 GO:GO:0005938
GO:GO:0048471 GO:GO:0043234 GO:GO:0006461 GO:GO:0042981
GO:GO:0019886 GO:GO:0050852 GO:GO:0042088 GO:GO:0007254
GO:GO:0005811 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0031965 GO:GO:0048661 GO:GO:0045944 GO:GO:0000122
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102
GO:GO:0001843 GO:GO:0042475 GO:GO:0045453 GO:GO:0004842
GO:GO:0001503 GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907
GO:GO:0070534 GO:GO:0048468 GO:GO:0007249 SUPFAM:SSF49599
GO:GO:0043011 GO:GO:0035631 EMBL:CH473949 GO:GO:0045672
GO:GO:0030316 GO:GO:0032743 GO:GO:0051023 GO:GO:0043507
GO:GO:0070498 GO:GO:0045410 GO:GO:2000679 GO:GO:0045084
GO:GO:0031666 GO:GO:0002726 GeneTree:ENSGT00550000074359 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:BC168921
IPI:IPI00363697 RefSeq:NP_001101224.1 UniGene:Rn.220435
ProteinModelPortal:B5DF45 STRING:B5DF45 PhosphoSite:B5DF45
Ensembl:ENSRNOT00000006148 GeneID:311245 KEGG:rno:311245
UCSC:RGD:1306853 NextBio:663249 Genevestigator:B5DF45
Uniprot:B5DF45
Length = 530
Score = 113 (44.8 bits), Expect = 0.00058, P = 0.00058
Identities = 21/39 (53%), Positives = 24/39 (61%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQG-KCP 200
+ CPIC+ L EA T CGH FCK CI +I G KCP
Sbjct: 68 YECPICLMALREAVQTPCGHRFCKACITKSIRDAGHKCP 106
>UNIPROTKB|F6XV32 [details] [associations]
symbol:BFAR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001660 PROSITE:PS50089
PROSITE:PS50105 SMART:SM00184 SMART:SM00454 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 InterPro:IPR017907
GeneTree:ENSGT00390000005386 EMBL:AAEX03004504
Ensembl:ENSCAFT00000029825 Uniprot:F6XV32
Length = 449
Score = 112 (44.5 bits), Expect = 0.00060, P = 0.00060
Identities = 27/81 (33%), Positives = 40/81 (49%)
Query: 127 EATPDNCCINVDTSNNNKNDAAPLQLPQDPMAAAPTFSCPICMGPLSEATSTKCGHIFCK 186
E +P N +N T +N+ PL+ P + FSC C L T+ CGH FC+
Sbjct: 2 EESPQND-LNAVTHDNDD----PLK-STSPQISVSEFSCHCCYDILVNPTTLNCGHSFCR 55
Query: 187 DCIK--GAIAAQGKCPNCRQK 205
C+ A + + +CP CR+K
Sbjct: 56 HCLALWWASSKKTECPECREK 76
>UNIPROTKB|E2QZD5 [details] [associations]
symbol:BFAR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001660 PROSITE:PS50089
PROSITE:PS50105 SMART:SM00184 SMART:SM00454 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 InterPro:IPR017907 CTD:51283 KO:K15684
OMA:FEDIQQN GeneTree:ENSGT00390000005386 EMBL:AAEX03004504
RefSeq:XP_547118.2 Ensembl:ENSCAFT00000029825
Ensembl:ENSCAFT00000043780 GeneID:489998 KEGG:cfa:489998
NextBio:20863103 Uniprot:E2QZD5
Length = 450
Score = 112 (44.5 bits), Expect = 0.00061, P = 0.00061
Identities = 27/81 (33%), Positives = 40/81 (49%)
Query: 127 EATPDNCCINVDTSNNNKNDAAPLQLPQDPMAAAPTFSCPICMGPLSEATSTKCGHIFCK 186
E +P N +N T +N+ PL+ P + FSC C L T+ CGH FC+
Sbjct: 2 EESPQND-LNAVTHDNDD----PLK-STSPQISVSEFSCHCCYDILVNPTTLNCGHSFCR 55
Query: 187 DCIK--GAIAAQGKCPNCRQK 205
C+ A + + +CP CR+K
Sbjct: 56 HCLALWWASSKKTECPECREK 76
>FB|FBgn0039150 [details] [associations]
symbol:CG13605 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
EMBL:AE014297 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000014213
FlyBase:FBgn0039150 EMBL:BT016044 RefSeq:NP_651214.2
UniGene:Dm.11197 SMR:Q9VCD3 IntAct:Q9VCD3 MINT:MINT-871599
EnsemblMetazoa:FBtr0300705 GeneID:42858 KEGG:dme:Dmel_CG13605
UCSC:CG13605-RA InParanoid:Q9VCD3 OMA:IFCDECV OrthoDB:EOG45X6BS
GenomeRNAi:42858 NextBio:830950 Uniprot:Q9VCD3
Length = 669
Score = 114 (45.2 bits), Expect = 0.00061, P = 0.00061
Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 154 QDPMAAAPTFSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKV 206
+D + AA CPIC + T +CGHIFC +C++ + CP CR KV
Sbjct: 600 KDELDAAGAL-CPICHDAFNTPTVLECGHIFCDECVQTWFKREQTCPMCRAKV 651
>ZFIN|ZDB-GENE-090511-2 [details] [associations]
symbol:btr01 "bloodthirsty-related gene family,
member 1" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-090511-2 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00660000095328 EMBL:CU929294 IPI:IPI00773115
Ensembl:ENSDART00000073689 Bgee:F1QYX5 Uniprot:F1QYX5
Length = 565
Score = 113 (44.8 bits), Expect = 0.00064, P = 0.00064
Identities = 21/50 (42%), Positives = 26/50 (52%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGK---CPNCRQKVGKR 209
F+C IC+ + ST CGH FC CI QGK CP C++ KR
Sbjct: 17 FTCSICLDIFTNPVSTPCGHSFCSSCISSYWEGQGKTCFCPLCKESFRKR 66
>UNIPROTKB|E7EUM2 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006281
Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780
EMBL:AC135721 HGNC:HGNC:1100 ChiTaRS:BRCA1 IPI:IPI00946315
ProteinModelPortal:E7EUM2 SMR:E7EUM2 Ensembl:ENST00000478531
UCSC:uc002idc.1 ArrayExpress:E7EUM2 Bgee:E7EUM2 Uniprot:E7EUM2
Length = 623
Score = 113 (44.8 bits), Expect = 0.00073, P = 0.00073
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 165 CPICMGPLSEATSTKCGHIFCKDC-IKGAIAAQG--KCPNCRQKVGKRGI 211
CPIC+ + E STKC HIFCK C +K +G +CP C+ + KR +
Sbjct: 24 CPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSL 73
>UNIPROTKB|F6XUF9 [details] [associations]
symbol:RNF20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 KO:K10696 CTD:56254 GeneTree:ENSGT00390000002866
OMA:KQDSEDL EMBL:AAEX03008005 Ensembl:ENSCAFT00000004109
EMBL:AAEX03008004 RefSeq:XP_532018.3 GeneID:474788 KEGG:cfa:474788
Uniprot:F6XUF9
Length = 975
Score = 115 (45.5 bits), Expect = 0.00076, P = 0.00075
Identities = 39/158 (24%), Positives = 60/158 (37%)
Query: 64 DDDLAIINQRIFAEAKNNSRRNHSQVVDQLRHVLTDAGGLLDSLQ-EVTDLAILYVKQRR 122
+ +L + Q + E +Q+ D L+ L A L Q E+ + ++ K
Sbjct: 820 EKELGLRTQAL--EMNKRKAMEAAQLADDLKAQLELAQKKLHDFQDEIVENSVTKEKDMF 877
Query: 123 NRPDEATPDNCCINVDTSNNNKNDAAPLQ---LPQDPMAAAPTFSCPICMGPLSEATSTK 179
N A D + K D P L ++ +CP C +A TK
Sbjct: 878 NFK-RAQEDISRLRRKLETTKKPDNVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTK 936
Query: 180 CGHIFCKDCIKGAI-AAQGKCPNCRQKVGKRGIFRVYL 216
C H+FC +C+K Q KCP C G R+Y+
Sbjct: 937 CFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYI 974
>UNIPROTKB|Q5VTR2 [details] [associations]
symbol:RNF20 "E3 ubiquitin-protein ligase BRE1A"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0031062 "positive regulation of histone methylation"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0010390 "histone monoubiquitination"
evidence=IDA] [GO:0033523 "histone H2B ubiquitination"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0002039 "p53 binding" evidence=IDA] [GO:0030336
"negative regulation of cell migration" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] [GO:0000151 "ubiquitin ligase complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0033503 "HULC
complex" evidence=IDA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0030336
GO:GO:0003713 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 GO:GO:0042393 EMBL:AL353621 GO:GO:0000209
InterPro:IPR017907 GO:GO:0002039 eggNOG:NOG263074 KO:K10696
GO:GO:0033523 GO:GO:0010390 CTD:56254 HOVERGEN:HBG080312
OMA:KQDSEDL OrthoDB:EOG49W2DV GO:GO:0033503 EMBL:AF265230
EMBL:AK000389 EMBL:AK000697 EMBL:AK002051 EMBL:AK022300
EMBL:AK022532 EMBL:AK314401 EMBL:AL591377 EMBL:BC063115
EMBL:BC110584 EMBL:BC110585 EMBL:BC152309 EMBL:AL832910
EMBL:AL834272 IPI:IPI00251559 RefSeq:NP_062538.5 UniGene:Hs.729085
ProteinModelPortal:Q5VTR2 SMR:Q5VTR2 IntAct:Q5VTR2 STRING:Q5VTR2
PhosphoSite:Q5VTR2 DMDM:84027766 PaxDb:Q5VTR2 PRIDE:Q5VTR2
Ensembl:ENST00000389120 GeneID:56254 KEGG:hsa:56254 UCSC:uc004bbn.3
GeneCards:GC09P104296 HGNC:HGNC:10062 HPA:CAB012478 MIM:607699
neXtProt:NX_Q5VTR2 PharmGKB:PA34427 ChiTaRS:RNF20 GenomeRNAi:56254
NextBio:61893 ArrayExpress:Q5VTR2 Bgee:Q5VTR2 Genevestigator:Q5VTR2
GermOnline:ENSG00000155827 Uniprot:Q5VTR2
Length = 975
Score = 115 (45.5 bits), Expect = 0.00076, P = 0.00075
Identities = 39/158 (24%), Positives = 60/158 (37%)
Query: 64 DDDLAIINQRIFAEAKNNSRRNHSQVVDQLRHVLTDAGGLLDSLQ-EVTDLAILYVKQRR 122
+ +L + Q + E +Q+ D L+ L A L Q E+ + ++ K
Sbjct: 820 EKELGLRTQAL--EMNKRKAMEAAQLADDLKAQLELAQKKLHDFQDEIVENSVTKEKDMF 877
Query: 123 NRPDEATPDNCCINVDTSNNNKNDAAPLQ---LPQDPMAAAPTFSCPICMGPLSEATSTK 179
N A D + K D P L ++ +CP C +A TK
Sbjct: 878 NFK-RAQEDISRLRRKLETTKKPDNVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTK 936
Query: 180 CGHIFCKDCIKGAI-AAQGKCPNCRQKVGKRGIFRVYL 216
C H+FC +C+K Q KCP C G R+Y+
Sbjct: 937 CFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYI 974
>UNIPROTKB|F1SSB0 [details] [associations]
symbol:LOC100154259 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 KO:K10696 GeneTree:ENSGT00390000002866
OMA:KQDSEDL EMBL:CU313312 RefSeq:XP_001926629.2
Ensembl:ENSSSCT00000005942 GeneID:100154259 KEGG:ssc:100154259
Uniprot:F1SSB0
Length = 975
Score = 115 (45.5 bits), Expect = 0.00076, P = 0.00075
Identities = 39/158 (24%), Positives = 60/158 (37%)
Query: 64 DDDLAIINQRIFAEAKNNSRRNHSQVVDQLRHVLTDAGGLLDSLQ-EVTDLAILYVKQRR 122
+ +L + Q + E +Q+ D L+ L A L Q E+ + ++ K
Sbjct: 820 EKELGLRTQAL--EMNKRKAMEAAQLADDLKAQLELAQKKLHDFQDEIVENSVTKEKDMF 877
Query: 123 NRPDEATPDNCCINVDTSNNNKNDAAPLQ---LPQDPMAAAPTFSCPICMGPLSEATSTK 179
N A D + K D P L ++ +CP C +A TK
Sbjct: 878 NFK-RAQEDISRLRRKLETTKKPDNVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTK 936
Query: 180 CGHIFCKDCIKGAI-AAQGKCPNCRQKVGKRGIFRVYL 216
C H+FC +C+K Q KCP C G R+Y+
Sbjct: 937 CFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYI 974
>UNIPROTKB|E2QZB1 [details] [associations]
symbol:RNF20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0033523 "histone H2B ubiquitination"
evidence=IEA] [GO:0033503 "HULC complex" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031062
"positive regulation of histone methylation" evidence=IEA]
[GO:0030336 "negative regulation of cell migration" evidence=IEA]
[GO:0010390 "histone monoubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0045893 GO:GO:0005730 GO:GO:0008270 GO:GO:0030336
GO:GO:0003713 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0033523
GO:GO:0010390 GO:GO:0033503 Ensembl:ENSCAFT00000004109
Uniprot:E2QZB1
Length = 977
Score = 115 (45.5 bits), Expect = 0.00076, P = 0.00076
Identities = 39/158 (24%), Positives = 60/158 (37%)
Query: 64 DDDLAIINQRIFAEAKNNSRRNHSQVVDQLRHVLTDAGGLLDSLQ-EVTDLAILYVKQRR 122
+ +L + Q + E +Q+ D L+ L A L Q E+ + ++ K
Sbjct: 822 EKELGLRTQAL--EMNKRKAMEAAQLADDLKAQLELAQKKLHDFQDEIVENSVTKEKDMF 879
Query: 123 NRPDEATPDNCCINVDTSNNNKNDAAPLQ---LPQDPMAAAPTFSCPICMGPLSEATSTK 179
N A D + K D P L ++ +CP C +A TK
Sbjct: 880 NFK-RAQEDISRLRRKLETTKKPDNVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTK 938
Query: 180 CGHIFCKDCIKGAI-AAQGKCPNCRQKVGKRGIFRVYL 216
C H+FC +C+K Q KCP C G R+Y+
Sbjct: 939 CFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYI 976
>UNIPROTKB|I3L5V4 [details] [associations]
symbol:LOC100625036 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0033523 "histone H2B ubiquitination"
evidence=IEA] [GO:0033503 "HULC complex" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031062
"positive regulation of histone methylation" evidence=IEA]
[GO:0030336 "negative regulation of cell migration" evidence=IEA]
[GO:0010390 "histone monoubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00390000002866
Ensembl:ENSSSCT00000024274 OMA:VDSENIN Uniprot:I3L5V4
Length = 978
Score = 115 (45.5 bits), Expect = 0.00076, P = 0.00076
Identities = 39/158 (24%), Positives = 60/158 (37%)
Query: 64 DDDLAIINQRIFAEAKNNSRRNHSQVVDQLRHVLTDAGGLLDSLQ-EVTDLAILYVKQRR 122
+ +L + Q + E +Q+ D L+ L A L Q E+ + ++ K
Sbjct: 823 EKELGLRTQAL--EMNKRKAMEAAQLADDLKAQLELAQKKLHDFQDEIVENSVTKEKDMF 880
Query: 123 NRPDEATPDNCCINVDTSNNNKNDAAPLQ---LPQDPMAAAPTFSCPICMGPLSEATSTK 179
N A D + K D P L ++ +CP C +A TK
Sbjct: 881 NFK-RAQEDISRLRRKLETTKKPDNVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTK 939
Query: 180 CGHIFCKDCIKGAI-AAQGKCPNCRQKVGKRGIFRVYL 216
C H+FC +C+K Q KCP C G R+Y+
Sbjct: 940 CFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYI 977
>UNIPROTKB|F1PW68 [details] [associations]
symbol:DTX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00440000035370 EMBL:AAEX03006952
Ensembl:ENSCAFT00000035912 OMA:TMIVERD Uniprot:F1PW68
Length = 247
Score = 107 (42.7 bits), Expect = 0.00076, P = 0.00076
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 164 SCPICMGPLSEA-TSTKCGHIFCKDCIKGAIAAQGKCPNCRQKVGK 208
+CPIC+G + A T KC H FC+ CI A+ + CP C + G+
Sbjct: 63 TCPICLGEIQNAKTLEKCRHSFCEGCITRALQVKKACPMCGRFYGQ 108
>UNIPROTKB|E7EWN5 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0007420 GO:GO:0032355
GO:GO:0005759 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000794 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820 EMBL:AC060780
EMBL:AC135721 HGNC:HGNC:1100 ChiTaRS:BRCA1 GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 IPI:IPI00930098
ProteinModelPortal:E7EWN5 SMR:E7EWN5 Ensembl:ENST00000470026
ArrayExpress:E7EWN5 Bgee:E7EWN5 Uniprot:E7EWN5
Length = 649
Score = 113 (44.8 bits), Expect = 0.00077, P = 0.00077
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 165 CPICMGPLSEATSTKCGHIFCKDC-IKGAIAAQG--KCPNCRQKVGKRGI 211
CPIC+ + E STKC HIFCK C +K +G +CP C+ + KR +
Sbjct: 24 CPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSL 73
>UNIPROTKB|O60683 [details] [associations]
symbol:PEX10 "Peroxisome biogenesis factor 10" species:9606
"Homo sapiens" [GO:0005779 "integral to peroxisomal membrane"
evidence=IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IEA;NAS]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IMP;IDA] [GO:0007031 "peroxisome organization"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008022 "protein C-terminus binding" evidence=IPI] [GO:0005778
"peroxisomal membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089
SMART:SM00184 InterPro:IPR006845 Prosite:PS00518 GO:GO:0005777
GO:GO:0046872 GO:GO:0008270 GO:GO:0005779 EMBL:CH471183
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558
InterPro:IPR017907 Orphanet:912 eggNOG:COG5574 KO:K13346
OMA:FRQRQRA PANTHER:PTHR23350 Pfam:PF04757 EMBL:AF060502
EMBL:AB013818 EMBL:AK124816 EMBL:AL513477 EMBL:BC000543
EMBL:BC018198 IPI:IPI00031033 IPI:IPI00220987 RefSeq:NP_002608.1
RefSeq:NP_722540.1 UniGene:Hs.732228 ProteinModelPortal:O60683
SMR:O60683 IntAct:O60683 STRING:O60683 TCDB:3.A.20.1.1
PhosphoSite:O60683 PaxDb:O60683 PRIDE:O60683 DNASU:5192
Ensembl:ENST00000288774 Ensembl:ENST00000447513 GeneID:5192
KEGG:hsa:5192 UCSC:uc001ajg.3 UCSC:uc001ajh.3 CTD:5192
GeneCards:GC01M002368 HGNC:HGNC:8851 MIM:602859 MIM:614870
MIM:614871 neXtProt:NX_O60683 Orphanet:247815 Orphanet:772
Orphanet:44 PharmGKB:PA33193 HOGENOM:HOG000180194
HOVERGEN:HBG053568 InParanoid:O60683 GenomeRNAi:5192 NextBio:20080
ArrayExpress:O60683 Bgee:O60683 CleanEx:HS_PEX10
Genevestigator:O60683 GermOnline:ENSG00000157911 Uniprot:O60683
Length = 326
Score = 109 (43.4 bits), Expect = 0.00080, P = 0.00080
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 165 CPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQK 205
C +C+ T+T CGH+FC +CI +++ +CP CR+K
Sbjct: 273 CTLCLEERRHPTATPCGHLFCWECITAWCSSKAECPLCREK 313
>UNIPROTKB|Q8HXW8 [details] [associations]
symbol:PEX10 "Peroxisome biogenesis factor 10" species:9541
"Macaca fascicularis" [GO:0005779 "integral to peroxisomal
membrane" evidence=ISS] [GO:0007031 "peroxisome organization"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089
SMART:SM00184 InterPro:IPR006845 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005779 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0008022 GO:GO:0016558 InterPro:IPR017907 PANTHER:PTHR23350
Pfam:PF04757 HOVERGEN:HBG053568 EMBL:AB083323
ProteinModelPortal:Q8HXW8 Uniprot:Q8HXW8
Length = 326
Score = 109 (43.4 bits), Expect = 0.00080, P = 0.00080
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 165 CPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQK 205
C +C+ T+T CGH+FC +CI +++ +CP CR+K
Sbjct: 273 CTLCLEERRHPTATPCGHLFCWECITAWCSSKAECPLCREK 313
>UNIPROTKB|C9IZE0 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 OrthoDB:EOG4K3KX1 HGNC:HGNC:30834
HOGENOM:HOG000199013 IPI:IPI00945336 ProteinModelPortal:C9IZE0
SMR:C9IZE0 STRING:C9IZE0 Ensembl:ENST00000471155
ArrayExpress:C9IZE0 Bgee:C9IZE0 Uniprot:C9IZE0
Length = 114
Score = 89 (36.4 bits), Expect = 0.00081, P = 0.00081
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQG------------KCPNCRQ--KVGKR 209
+CPIC + C H FC++C++ + A G KCPNCR ++
Sbjct: 9 TCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCRSITEIAPT 68
Query: 210 GI 211
GI
Sbjct: 69 GI 70
>UNIPROTKB|C9J9F0 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 HGNC:HGNC:30834 HOGENOM:HOG000199013 IPI:IPI00945495
ProteinModelPortal:C9J9F0 SMR:C9J9F0 STRING:C9J9F0
Ensembl:ENST00000494486 ArrayExpress:C9J9F0 Bgee:C9J9F0
Uniprot:C9J9F0
Length = 111
Score = 89 (36.4 bits), Expect = 0.00081, P = 0.00081
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQG------------KCPNCRQ--KVGKR 209
+CPIC + C H FC++C++ + A G KCPNCR ++
Sbjct: 9 TCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCRSITEIAPT 68
Query: 210 GI 211
GI
Sbjct: 69 GI 70
>UNIPROTKB|E9PMW8 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001594 PROSITE:PS50089
PROSITE:PS50216 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736 EMBL:AL513329
EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2 IPI:IPI00979234
ProteinModelPortal:E9PMW8 SMR:E9PMW8 Ensembl:ENST00000491600
ArrayExpress:E9PMW8 Bgee:E9PMW8 Uniprot:E9PMW8
Length = 68
Score = 89 (36.4 bits), Expect = 0.00081, P = 0.00081
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 172 LSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKV 206
+ EA TKCGH FC CI ++ +CP C V
Sbjct: 2 IEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVV 36
>UNIPROTKB|G3XAC3 [details] [associations]
symbol:BRCA1 "Breast cancer 1, early onset, isoform CRA_l"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357 Pfam:PF00533
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
EMBL:CH471152 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780 EMBL:AC135721
UniGene:Hs.194143 HGNC:HGNC:1100 ChiTaRS:BRCA1
ProteinModelPortal:G3XAC3 SMR:G3XAC3 PRIDE:G3XAC3
Ensembl:ENST00000351666 ArrayExpress:G3XAC3 Bgee:G3XAC3
Uniprot:G3XAC3
Length = 680
Score = 113 (44.8 bits), Expect = 0.00081, P = 0.00081
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 165 CPICMGPLSEATSTKCGHIFCKDC-IKGAIAAQG--KCPNCRQKVGKRGI 211
CPIC+ + E STKC HIFCK C +K +G +CP C+ + KR +
Sbjct: 24 CPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSL 73
>ZFIN|ZDB-GENE-070705-22 [details] [associations]
symbol:si:ch211-121a2.3 "si:ch211-121a2.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 ZFIN:ZDB-GENE-070705-22 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 EMBL:BX511260
GeneTree:ENSGT00670000097622 IPI:IPI00855283
Ensembl:ENSDART00000043248 Uniprot:F1Q4M8
Length = 562
Score = 112 (44.5 bits), Expect = 0.00084, P = 0.00083
Identities = 23/52 (44%), Positives = 28/52 (53%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKG--AIAAQGK---CPNCRQKVGKR 209
FSCPICM L + + CGH +C +CIK +Q K CP CRQ R
Sbjct: 15 FSCPICMDLLRDPVTIPCGHNYCMECIKSFWEQKSQRKLCSCPECRQSFNPR 66
>DICTYBASE|DDB_G0274241 [details] [associations]
symbol:bre1 "RmlC-like cupin family protein"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 dictyBase:DDB_G0274241 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GenomeReviews:CM000151_GR GO:GO:0016568 GO:GO:0016567
EMBL:AAFI02000012 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:NOG263074 KO:K10696 RefSeq:XP_644058.1
ProteinModelPortal:Q86KL1 EnsemblProtists:DDB0237665 GeneID:8619487
KEGG:ddi:DDB_G0274241 Uniprot:Q86KL1
Length = 1080
Score = 115 (45.5 bits), Expect = 0.00085, P = 0.00085
Identities = 24/99 (24%), Positives = 47/99 (47%)
Query: 118 VKQRRNRPDEATPDNCCINVDTSNNNKNDAAPLQLPQDPMAAAPTFSCPICMGPLSEATS 177
+K++ + A +N N + +NNN N+++ + ++ C IC
Sbjct: 983 LKKKLEKATSANNNNNNNNNNNNNNNNNNSSSSE--EELKLINQRLRCTICNDRQKNYVI 1040
Query: 178 TKCGHIFCKDCIKGAI-AAQGKCPNCRQKVGKRGIFRVY 215
KC H+FCK+CI I + +CP+C + + + ++Y
Sbjct: 1041 AKCFHVFCKECIYSNIDTRKRRCPSCNRAFAETDVHQIY 1079
>MGI|MGI:104537 [details] [associations]
symbol:Brca1 "breast cancer 1" species:10090 "Mus musculus"
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IDA] [GO:0003723 "RNA binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005694 "chromosome" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005759 "mitochondrial
matrix" evidence=ISO] [GO:0005813 "centrosome" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006260 "DNA
replication" evidence=IMP] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006301 "postreplication repair" evidence=ISO] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IMP] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006631 "fatty acid metabolic
process" evidence=IEA] [GO:0006633 "fatty acid biosynthetic
process" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=ISO] [GO:0007098
"centrosome cycle" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling pathway in
response to DNA damage" evidence=ISO] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=IDA]
[GO:0010212 "response to ionizing radiation" evidence=ISO]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=ISO] [GO:0031436 "BRCA1-BARD1 complex" evidence=ISO]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0035066 "positive regulation of histone acetylation"
evidence=ISO;IMP] [GO:0035067 "negative regulation of histone
acetylation" evidence=IMP] [GO:0043009 "chordate embryonic
development" evidence=IMP] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043627 "response to estrogen stimulus"
evidence=ISO] [GO:0044030 "regulation of DNA methylation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045717 "negative regulation of
fatty acid biosynthetic process" evidence=ISO] [GO:0045739
"positive regulation of DNA repair" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051298 "centrosome duplication"
evidence=TAS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISO;IMP] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=IMP] [GO:0051573 "negative
regulation of histone H3-K9 methylation" evidence=ISO;IMP]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0051865 "protein autoubiquitination"
evidence=ISO] [GO:0070512 "positive regulation of histone H4-K20
methylation" evidence=ISO;IMP] [GO:0070531 "BRCA1-A complex"
evidence=ISO] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=ISO] [GO:0071681 "cellular response to
indole-3-methanol" evidence=ISO] [GO:0085020 "protein K6-linked
ubiquitination" evidence=ISO] [GO:2000145 "regulation of cell
motility" evidence=ISO] [GO:2000617 "positive regulation of histone
H3-K9 acetylation" evidence=ISO;IMP] [GO:2000620 "positive
regulation of histone H4-K16 acetylation" evidence=ISO;IMP]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR001357 MGI:MGI:104537 Pfam:PF00533 Prosite:PS00518
GO:GO:0005737 GO:GO:0005813 GO:GO:0008630 GO:GO:0005654
GO:GO:0051298 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0045944 GO:GO:0006633
GO:GO:0003723 GO:GO:0044212 GO:GO:0045717 Reactome:REACT_118161
Reactome:REACT_120463 Reactome:REACT_75800 GO:GO:0006310
GO:GO:0030529 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794
GO:GO:0004842 GO:GO:0006349 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 GO:GO:0051865
Reactome:REACT_27235 GO:GO:0031436 GO:GO:0085020 GO:GO:0051572
eggNOG:NOG274496 PANTHER:PTHR13763 CTD:672 HOGENOM:HOG000230969
HOVERGEN:HBG050730 KO:K10605 OrthoDB:EOG42RD7C InterPro:IPR025994
Pfam:PF12820 GO:GO:0051573 GO:GO:0051571 GO:GO:2000617
GO:GO:2000620 GO:GO:0070512 EMBL:U31625 EMBL:U35641 EMBL:U32446
EMBL:U36475 EMBL:AL590996 EMBL:U33835 IPI:IPI00331711
IPI:IPI00421063 PIR:I49350 RefSeq:NP_033894.3 UniGene:Mm.244975
ProteinModelPortal:P48754 DIP:DIP-41981N STRING:P48754
PhosphoSite:P48754 PRIDE:P48754 Ensembl:ENSMUST00000017290
GeneID:12189 KEGG:mmu:12189 GeneTree:ENSGT00440000034289
InParanoid:P48754 OMA:CMLKLLN NextBio:280581 CleanEx:MM_BRCA1
Genevestigator:P48754 GermOnline:ENSMUSG00000017146 GO:GO:0043009
GO:GO:0009048 GO:GO:0035067 GO:GO:0051574 GO:GO:0044030
Uniprot:P48754
Length = 1812
Score = 117 (46.2 bits), Expect = 0.00089, P = 0.00089
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 147 AAPLQLPQDPM-AAAPTFSCPICMGPLSEATSTKCGHIFCKDC-IKGAIAAQG--KCPNC 202
A +Q Q+ + A CPIC+ + E STKC HIFCK C +K +G +CP C
Sbjct: 5 AVQIQEVQNVLHAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLC 64
Query: 203 RQKVGKRGI 211
+ ++ KR +
Sbjct: 65 KNEITKRSL 73
>MGI|MGI:2135752 [details] [associations]
symbol:Dtx3 "deltex 3 homolog (Drosophila)" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IDA;TAS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2135752 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0007219 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:NOG84763 HOGENOM:HOG000007352 KO:K06058
GeneTree:ENSGT00440000035370 CTD:196403 HOVERGEN:HBG045495
EMBL:AB015425 EMBL:BC099687 EMBL:BC138304 EMBL:BC157899
IPI:IPI00330413 RefSeq:NP_109639.1 UniGene:Mm.271724
ProteinModelPortal:Q80V91 SMR:Q80V91 STRING:Q80V91
PhosphoSite:Q80V91 PaxDb:Q80V91 PRIDE:Q80V91
Ensembl:ENSMUST00000038217 GeneID:80904 KEGG:mmu:80904
UCSC:uc007hil.1 ChiTaRS:DTX3 NextBio:350250 Bgee:Q80V91
CleanEx:MM_DTX3 Genevestigator:Q80V91 GermOnline:ENSMUSG00000040415
Uniprot:Q80V91
Length = 347
Score = 109 (43.4 bits), Expect = 0.00089, P = 0.00089
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 149 PLQLPQDPMAAAPTFSCPICMGPLSEA-TSTKCGHIFCKDCIKGAIAAQGKCPNCRQKVG 207
P +L +D A +CPIC+G + A T KC H FC+ CI A+ + CP C + G
Sbjct: 150 PPRLRED--AEEQETTCPICLGEIQNAKTLEKCRHSFCEGCITRALQVKKACPMCGRFYG 207
Query: 208 K 208
+
Sbjct: 208 Q 208
>UNIPROTKB|F1LY78 [details] [associations]
symbol:Dtx3 "Protein Dtx3" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 RGD:1566181
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00440000035370
IPI:IPI00991273 ProteinModelPortal:F1LY78
Ensembl:ENSRNOT00000006815 ArrayExpress:F1LY78 Uniprot:F1LY78
Length = 347
Score = 109 (43.4 bits), Expect = 0.00089, P = 0.00089
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 149 PLQLPQDPMAAAPTFSCPICMGPLSEA-TSTKCGHIFCKDCIKGAIAAQGKCPNCRQKVG 207
P +L +D A +CPIC+G + A T KC H FC+ CI A+ + CP C + G
Sbjct: 150 PPRLRED--AEEQETTCPICLGEIQNAKTLEKCRHSFCEGCITRALQVKKACPMCGRFYG 207
Query: 208 K 208
+
Sbjct: 208 Q 208
>FB|FBgn0028896 [details] [associations]
symbol:CG17329 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:AE014134
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00540000072968 EMBL:AY089367 RefSeq:NP_609784.2
UniGene:Dm.5069 SMR:Q9V3Z8 EnsemblMetazoa:FBtr0080827 GeneID:34958
KEGG:dme:Dmel_CG17329 UCSC:CG17329-RA FlyBase:FBgn0028896
eggNOG:NOG290953 InParanoid:Q9V3Z8 OrthoDB:EOG4RR50B
GenomeRNAi:34958 NextBio:791095 Uniprot:Q9V3Z8
Length = 162
Score = 101 (40.6 bits), Expect = 0.00091, P = 0.00091
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 164 SCPICMGPLSE-----ATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRVYLPT 218
+C IC+ P ++ S +CGH+F CI AI +CP CR++ + R+Y P+
Sbjct: 99 TCSICLLPWTDNGIHRLVSLRCGHLFGSSCIHMAIRRNHRCPICRRRARHFHVRRIYSPS 158
>UNIPROTKB|E7ETR2 [details] [associations]
symbol:BRCA1 "Breast cancer 1, early onset, isoform CRA_d"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357 Pfam:PF00533
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
EMBL:CH471152 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 PANTHER:PTHR13763 CTD:672 KO:K10605
EMBL:AC060780 EMBL:AC135721 IPI:IPI00027277 RefSeq:NP_009229.2
UniGene:Hs.194143 GeneID:672 KEGG:hsa:672 HGNC:HGNC:1100
ChiTaRS:BRCA1 GenomeRNAi:672 SMR:E7ETR2 Ensembl:ENST00000491747
Uniprot:E7ETR2
Length = 759
Score = 113 (44.8 bits), Expect = 0.00094, P = 0.00094
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 165 CPICMGPLSEATSTKCGHIFCKDC-IKGAIAAQG--KCPNCRQKVGKRGI 211
CPIC+ + E STKC HIFCK C +K +G +CP C+ + KR +
Sbjct: 24 CPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSL 73
>TAIR|locus:2098515 [details] [associations]
symbol:AT3G07120 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012395 UniGene:At.71829
HOGENOM:HOG000015147 EMBL:BT020309 EMBL:BT020575 IPI:IPI00527034
RefSeq:NP_187368.1 UniGene:At.40398 ProteinModelPortal:Q9SFU2
SMR:Q9SFU2 IntAct:Q9SFU2 PRIDE:Q9SFU2 EnsemblPlants:AT3G07120.1
GeneID:819898 KEGG:ath:AT3G07120 TAIR:At3g07120 eggNOG:NOG246895
InParanoid:Q9SFU2 OMA:ERQMSAR PhylomeDB:Q9SFU2
ProtClustDB:CLSN2714677 Genevestigator:Q9SFU2 Uniprot:Q9SFU2
Length = 360
Score = 109 (43.4 bits), Expect = 0.00095, P = 0.00095
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 164 SCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNC 202
SC +CM + A+ T CGH FCK C K +A +G CP C
Sbjct: 311 SCCVCMVKIKGASFTPCGHTFCKLCSKELMAQKGHCPVC 349
>FB|FBgn0034314 [details] [associations]
symbol:nopo "no poles" species:7227 "Drosophila melanogaster"
[GO:0007165 "signal transduction" evidence=ISS] [GO:0006952
"defense response" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=NAS]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IMP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
EMBL:AE013599 GO:GO:0007346 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 eggNOG:NOG86944
KO:K11985 GeneTree:ENSGT00390000007696 EMBL:AY060610
RefSeq:NP_611305.1 UniGene:Dm.19955 SMR:Q7K2X1 IntAct:Q7K2X1
STRING:Q7K2X1 EnsemblMetazoa:FBtr0086750 GeneID:37083
KEGG:dme:Dmel_CG5140 UCSC:CG5140-RA CTD:37083 FlyBase:FBgn0034314
InParanoid:Q7K2X1 OMA:PQCRNKC OrthoDB:EOG4ZCRMZ GenomeRNAi:37083
NextBio:801869 Uniprot:Q7K2X1
Length = 435
Score = 110 (43.8 bits), Expect = 0.00097, P = 0.00097
Identities = 22/55 (40%), Positives = 28/55 (50%)
Query: 164 SCPIC---MGPLSEATSTKCGHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRVY 215
+C IC G E +T CGH+F +C+ + CP CR K R IFRVY
Sbjct: 5 NCVICAELFGQADEVFATVCGHMFHHNCLNQWLDRSKTCPQCRNKCTTRNIFRVY 59
>UNIPROTKB|Q9Y4K3 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0006461 "protein complex
assembly" evidence=IEA] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=IEA] [GO:0030316 "osteoclast differentiation"
evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0042088 "T-helper 1 type immune response" evidence=IEA]
[GO:0042102 "positive regulation of T cell proliferation"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0043011 "myeloid dendritic cell
differentiation" evidence=IEA] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IEA] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IEA] [GO:0045453 "bone resorption" evidence=IEA]
[GO:0048468 "cell development" evidence=IEA] [GO:0048661 "positive
regulation of smooth muscle cell proliferation" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0070498 "interleukin-1-mediated signaling pathway"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0051865 "protein
autoubiquitination" evidence=IDA;TAS] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IMP] [GO:0002726
"positive regulation of T cell cytokine production" evidence=IMP]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IMP] [GO:0050870 "positive regulation of T cell
activation" evidence=IC] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=EXP;IDA;TAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0050852 "T cell receptor
signaling pathway" evidence=IMP;TAS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IMP;IDA;TAS] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0043422 "protein kinase B binding" evidence=IPI]
[GO:0070534 "protein K63-linked ubiquitination" evidence=IGI;IDA]
[GO:0043507 "positive regulation of JUN kinase activity"
evidence=IDA;NAS] [GO:0070555 "response to interleukin-1"
evidence=IDA] [GO:0032147 "activation of protein kinase activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA;TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IDA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IDA;TAS] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0031435 "mitogen-activated
protein kinase kinase kinase binding" evidence=IPI] [GO:0047485
"protein N-terminus binding" evidence=IPI] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IPI] [GO:0031996 "thioesterase
binding" evidence=IPI] [GO:0005811 "lipid particle" evidence=ISS]
[GO:0000187 "activation of MAPK activity" evidence=TAS] [GO:0002224
"toll-like receptor signaling pathway" evidence=TAS] [GO:0002755
"MyD88-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=TAS]
[GO:0007254 "JNK cascade" evidence=TAS] [GO:0008063 "Toll signaling
pathway" evidence=TAS] [GO:0010008 "endosome membrane"
evidence=TAS] [GO:0031293 "membrane protein intracellular domain
proteolysis" evidence=TAS] [GO:0034130 "toll-like receptor 1
signaling pathway" evidence=TAS] [GO:0034134 "toll-like receptor 2
signaling pathway" evidence=TAS] [GO:0034138 "toll-like receptor 3
signaling pathway" evidence=TAS] [GO:0034142 "toll-like receptor 4
signaling pathway" evidence=TAS] [GO:0035666 "TRIF-dependent
toll-like receptor signaling pathway" evidence=TAS] [GO:0035872
"nucleotide-binding domain, leucine rich repeat containing receptor
signaling pathway" evidence=TAS] [GO:0045087 "innate immune
response" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0051403 "stress-activated MAPK
cascade" evidence=TAS] [GO:0070423 "nucleotide-binding
oligomerization domain containing signaling pathway" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;NAS] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0009898 "internal side of plasma
membrane" evidence=ISS] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=NAS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:2000679 "positive regulation of
transcription regulatory region DNA binding" evidence=IDA]
[GO:0035631 "CD40 receptor complex" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] Reactome:REACT_6782 InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027139 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005829 GO:GO:0005938 GO:GO:0048471 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0048011
Pathway_Interaction_DB:p75ntrpathway
Pathway_Interaction_DB:cd8tcrpathway EMBL:CH471064 GO:GO:0042981
Pathway_Interaction_DB:tcrpathway GO:GO:0019886 GO:GO:0050852
GO:GO:0042088 Pathway_Interaction_DB:bcr_5pathway GO:GO:0007254
GO:GO:0005811 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0031965 GO:GO:0048661 GO:GO:0045944 GO:GO:0045087
GO:GO:0000187 GO:GO:0010008 GO:GO:0000122 GO:GO:0031293
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102
GO:GO:0001843 GO:GO:0042475 GO:GO:0045453 GO:GO:0031398
GO:GO:0070555 GO:GO:0004842 GO:GO:0001503 GO:GO:0007250
GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534 GO:GO:0048468
GO:GO:0051865 GO:GO:0002755 GO:GO:0008063 GO:GO:0034130
GO:GO:0034134 GO:GO:0034138 GO:GO:0034142 GO:GO:0035666
Pathway_Interaction_DB:nfkappabcanonicalpathway
Pathway_Interaction_DB:p38_mkk3_6pathway GO:GO:0007249
SUPFAM:SSF49599 GO:GO:0043011 GO:GO:0050870 GO:GO:0035631
Pathway_Interaction_DB:p38alphabetapathway GO:GO:0045672
GO:GO:0030316 GO:GO:0070423 Pathway_Interaction_DB:il1pathway
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 GO:GO:2000679 GO:GO:0045084 GO:GO:0031666
GO:GO:0002726 EMBL:AC009656 PDB:1LB6 PDBsum:1LB6 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:U78798
EMBL:AY228337 EMBL:AK292978 EMBL:AC061999 EMBL:BC031052
IPI:IPI00743663 PIR:S71821 RefSeq:NP_004611.1 RefSeq:NP_665802.1
UniGene:Hs.444172 UniGene:Hs.591983 PDB:1LB4 PDB:1LB5 PDB:2ECI
PDB:2JMD PDB:3HCS PDB:3HCT PDB:3HCU PDBsum:1LB4 PDBsum:1LB5
PDBsum:2ECI PDBsum:2JMD PDBsum:3HCS PDBsum:3HCT PDBsum:3HCU
ProteinModelPortal:Q9Y4K3 SMR:Q9Y4K3 DIP:DIP-27515N IntAct:Q9Y4K3
MINT:MINT-88585 STRING:Q9Y4K3 PhosphoSite:Q9Y4K3 DMDM:30580642
PaxDb:Q9Y4K3 PRIDE:Q9Y4K3 DNASU:7189 Ensembl:ENST00000348124
Ensembl:ENST00000526995 GeneID:7189 KEGG:hsa:7189 UCSC:uc001mwq.2
GeneCards:GC11M036467 HGNC:HGNC:12036 HPA:CAB004605 HPA:HPA019805
HPA:HPA020599 MIM:602355 neXtProt:NX_Q9Y4K3 PharmGKB:PA36713
InParanoid:Q9Y4K3 PhylomeDB:Q9Y4K3 ChiTaRS:Traf6
EvolutionaryTrace:Q9Y4K3 GenomeRNAi:7189 NextBio:28192 Bgee:Q9Y4K3
CleanEx:HS_TRAF6 Genevestigator:Q9Y4K3 GermOnline:ENSG00000175104
Uniprot:Q9Y4K3
Length = 522
Score = 111 (44.1 bits), Expect = 0.00098, P = 0.00098
Identities = 21/39 (53%), Positives = 24/39 (61%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQG-KCP 200
+ CPIC+ L EA T CGH FCK CI +I G KCP
Sbjct: 68 YECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCP 106
>UNIPROTKB|B6CJY4 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9531 "Cercocebus atys" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005811 "lipid particle"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005938 GO:GO:0005634
GO:GO:0007165 GO:GO:0042981 GO:GO:0005811 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599 HOVERGEN:HBG060248
PANTHER:PTHR10131:SF48 EMBL:EU204928 ProteinModelPortal:B6CJY4
Uniprot:B6CJY4
Length = 522
Score = 111 (44.1 bits), Expect = 0.00098, P = 0.00098
Identities = 21/39 (53%), Positives = 24/39 (61%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQG-KCP 200
+ CPIC+ L EA T CGH FCK CI +I G KCP
Sbjct: 68 YECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCP 106
>UNIPROTKB|B6CJY5 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9544 "Macaca mulatta" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005811 "lipid particle" evidence=ISS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005886 GO:GO:0005938 GO:GO:0048471
GO:GO:0042981 GO:GO:0050852 GO:GO:0005811 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0031965 GO:GO:0045944
GO:GO:0000122 GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0070555 GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907
GO:GO:0070534 SUPFAM:SSF49599 GO:GO:0045672 GO:GO:0032743
GO:GO:0043507 GO:GO:2000679 GO:GO:0002726 CTD:7189 eggNOG:NOG289765
HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
PANTHER:PTHR10131:SF48 EMBL:EU204929 RefSeq:NP_001129268.1
UniGene:Mmu.17706 STRING:B6CJY5 GeneID:716907 KEGG:mcc:716907
NextBio:19981456 Uniprot:B6CJY5
Length = 522
Score = 111 (44.1 bits), Expect = 0.00098, P = 0.00098
Identities = 21/39 (53%), Positives = 24/39 (61%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQG-KCP 200
+ CPIC+ L EA T CGH FCK CI +I G KCP
Sbjct: 68 YECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCP 106
>UNIPROTKB|F1RLR6 [details] [associations]
symbol:BFAR "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001660 PROSITE:PS50089
PROSITE:PS50105 SMART:SM00184 SMART:SM00454 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 InterPro:IPR017907
GeneTree:ENSGT00390000005386 EMBL:CU694585
Ensembl:ENSSSCT00000008634 OMA:IFMELER Uniprot:F1RLR6
Length = 319
Score = 108 (43.1 bits), Expect = 0.0010, P = 0.0010
Identities = 25/81 (30%), Positives = 39/81 (48%)
Query: 127 EATPDNCCINVDTSNNNKNDAAPLQLPQDPMAAAPTFSCPICMGPLSEATSTKCGHIFCK 186
E P N +++T ++ ++D PQ + FSC C L T+ CGH FC+
Sbjct: 2 EQLPQN---DLNTESHREDDPVTSTSPQ---ISVSEFSCHCCYDILVNPTTLNCGHSFCR 55
Query: 187 DCIK--GAIAAQGKCPNCRQK 205
C+ A + + +CP CR K
Sbjct: 56 HCLALWWASSKKTECPECRDK 76
>MGI|MGI:108072 [details] [associations]
symbol:Traf6 "TNF receptor-associated factor 6" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0001503 "ossification"
evidence=IMP] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0002726 "positive regulation of T cell cytokine production"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IDA] [GO:0004871 "signal transducer activity"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006461 "protein complex assembly" evidence=ISO]
[GO:0006955 "immune response" evidence=IMP] [GO:0007165 "signal
transduction" evidence=IDA;TAS] [GO:0007249 "I-kappaB
kinase/NF-kappaB cascade" evidence=IMP] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=ISO] [GO:0007254 "JNK
cascade" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0009898
"internal side of plasma membrane" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IGI] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=ISO] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0030316 "osteoclast differentiation" evidence=IMP] [GO:0031435
"mitogen-activated protein kinase kinase kinase binding"
evidence=ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IMP]
[GO:0031996 "thioesterase binding" evidence=ISO] [GO:0032147
"activation of protein kinase activity" evidence=ISO] [GO:0032743
"positive regulation of interleukin-2 production" evidence=ISO]
[GO:0035631 "CD40 receptor complex" evidence=IDA] [GO:0042088
"T-helper 1 type immune response" evidence=IMP] [GO:0042102
"positive regulation of T cell proliferation" evidence=IMP]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IMP] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043011 "myeloid dendritic cell differentiation"
evidence=IMP] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISO;IMP] [GO:0043234 "protein
complex" evidence=ISO] [GO:0043422 "protein kinase B binding"
evidence=ISO] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=ISO] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IMP] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IMP] [GO:0045453 "bone resorption" evidence=IMP]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046849 "bone remodeling" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=ISO] [GO:0048468 "cell development" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048661 "positive regulation of smooth muscle cell
proliferation" evidence=ISO] [GO:0050852 "T cell receptor signaling
pathway" evidence=ISO] [GO:0051023 "regulation of immunoglobulin
secretion" evidence=IDA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=ISO] [GO:0051865 "protein
autoubiquitination" evidence=ISO;TAS] [GO:0070498
"interleukin-1-mediated signaling pathway" evidence=ISO;IMP]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO;IDA]
[GO:0070555 "response to interleukin-1" evidence=ISO] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=ISO] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:108072 Prosite:PS00518 GO:GO:0005829
GO:GO:0005938 GO:GO:0048471 GO:GO:0042981 GO:GO:0019886
GO:GO:0050852 GO:GO:0042088 GO:GO:0007254 GO:GO:0005811
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0031965
GO:GO:0048661 GO:GO:0045944 Reactome:REACT_115202 EMBL:CH466519
GO:GO:0000122 GO:GO:0004871 Reactome:REACT_107772 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102 GO:GO:0001843
GO:GO:0042475 GO:GO:0045453 GO:GO:0004842 GO:GO:0001503
GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534
GO:GO:0048468 GO:GO:0051865 GO:GO:0007249 SUPFAM:SSF49599
GO:GO:0043011 GO:GO:0035631 GO:GO:0045672 GO:GO:0030316
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 GO:GO:2000679 GO:GO:0045084 GO:GO:0031666
GO:GO:0002726 EMBL:AL929571 GeneTree:ENSGT00550000074359 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:D84655
EMBL:AK041172 EMBL:AK155434 EMBL:BC060705 IPI:IPI00136488
IPI:IPI00222919 RefSeq:NP_033450.2 UniGene:Mm.292729 HSSP:Q9Y4K3
ProteinModelPortal:P70196 SMR:P70196 DIP:DIP-29812N IntAct:P70196
MINT:MINT-252449 STRING:P70196 PhosphoSite:P70196 PRIDE:P70196
Ensembl:ENSMUST00000004949 GeneID:22034 KEGG:mmu:22034
UCSC:uc008lhl.1 UCSC:uc008lhm.1 InParanoid:Q6P9M0 NextBio:301798
Bgee:P70196 CleanEx:MM_TRAF6 Genevestigator:P70196
GermOnline:ENSMUSG00000027164 Uniprot:P70196
Length = 530
Score = 111 (44.1 bits), Expect = 0.0010, P = 0.0010
Identities = 21/39 (53%), Positives = 24/39 (61%)
Query: 163 FSCPICMGPLSEATSTKCGHIFCKDCIKGAIAAQG-KCP 200
+ CPIC+ L EA T CGH FCK CI +I G KCP
Sbjct: 68 YECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCP 106
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 220 220 0.00094 112 3 11 22 0.39 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 186
No. of states in DFA: 611 (65 KB)
Total size of DFA: 188 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.11u 0.11s 22.22t Elapsed: 00:00:01
Total cpu time: 22.12u 0.11s 22.23t Elapsed: 00:00:01
Start: Sat May 11 02:42:35 2013 End: Sat May 11 02:42:36 2013
WARNINGS ISSUED: 1