BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027661
(220 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49960|PRP24_YEAST U4/U6 snRNA-associated-splicing factor PRP24 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=PRP24 PE=1
SV=1
Length = 444
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 128 DPAIAALTKYYSEVFPPSNTPGVSILDLCSSWVSHFPPGYKQDRI 172
D A+AA+TK + V N VS L C+ W+++FPP Y Q I
Sbjct: 91 DGALAAITKTHKVV--GQNEIIVSHLTECTLWMTNFPPSYTQRNI 133
>sp|Q15PS5|GPMI_PSEA6 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
OS=Pseudoalteromonas atlantica (strain T6c / ATCC
BAA-1087) GN=gpmI PE=3 SV=1
Length = 511
Score = 34.7 bits (78), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 14/74 (18%)
Query: 99 PFKEEDFQRFDESPDSLFYETPRFVTHIDDPAIAALTKYYSEVFPPSNTPGVSILDLCSS 158
PF E+DF F++ HID A LT+Y + P+ P V+++++
Sbjct: 269 PFVEKDFSDFEKGE------------HIDLSAFVMLTQYAESIDAPAAYPPVALVNVMGE 316
Query: 159 WVSHFPPGYKQDRI 172
W+++ G Q RI
Sbjct: 317 WLANH--GKTQLRI 328
>sp|Q86T82|UBP37_HUMAN Ubiquitin carboxyl-terminal hydrolase 37 OS=Homo sapiens GN=USP37
PE=1 SV=2
Length = 979
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 100 FKEEDFQRFDESPDSLFYETPRFVTHIDDPAIAALTK 136
F E+D Q E+PD++ E P+ +T +D + +TK
Sbjct: 740 FAEDDIQEMPENPDTMETEKPKTITELDPASFTEITK 776
>sp|Q73AY2|UBIE_BACC1 Demethylmenaquinone methyltransferase OS=Bacillus cereus (strain
ATCC 10987) GN=ubiE PE=3 SV=1
Length = 237
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 148 PGVSILDLC---SSWVSHFPPGY-KQDRIVGMGMNEEEL----KRNPVLTEYVVQDLNLN 199
PG LD+C + W +Q ++VG+ +E L ++ L V+ L+ N
Sbjct: 47 PGSKALDVCCGTADWTIALAEAVGEQGKVVGLDFSENMLSVGKQKVEALQLKQVELLHGN 106
Query: 200 P-KLPFEDNSFDVIT 213
+LPFEDN+FD +T
Sbjct: 107 AMELPFEDNTFDYVT 121
>sp|Q81FQ6|UBIE_BACCR Demethylmenaquinone methyltransferase OS=Bacillus cereus (strain
ATCC 14579 / DSM 31) GN=ubiE PE=3 SV=1
Length = 237
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 148 PGVSILDLC---SSWVSHFPPGY-KQDRIVGMGMNEEEL----KRNPVLTEYVVQDLNLN 199
PG LD+C + W +Q ++VG+ +E L ++ L V+ L+ N
Sbjct: 47 PGSQALDVCCGTADWTIALAGAVGEQGKVVGLDFSENMLSVGKQKVEALQLKQVELLHGN 106
Query: 200 P-KLPFEDNSFDVIT 213
+LPFEDN+FD +T
Sbjct: 107 AMELPFEDNTFDYVT 121
>sp|B7HHR7|UBIE_BACC4 Demethylmenaquinone methyltransferase OS=Bacillus cereus (strain
B4264) GN=ubiE PE=3 SV=1
Length = 237
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 148 PGVSILDLC---SSWVSHFPPGY-KQDRIVGMGMNEEEL----KRNPVLTEYVVQDLNLN 199
PG LD+C + W +Q ++VG+ +E L ++ L V+ L+ N
Sbjct: 47 PGSQALDVCCGTADWTIALAGAVGEQGKVVGLDFSENMLSVGKQKVEALQLKQVELLHGN 106
Query: 200 P-KLPFEDNSFDVIT 213
+LPFEDN+FD +T
Sbjct: 107 AMELPFEDNTFDYVT 121
>sp|B7IP91|UBIE_BACC2 Demethylmenaquinone methyltransferase OS=Bacillus cereus (strain
G9842) GN=ubiE PE=3 SV=1
Length = 237
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 148 PGVSILDLC---SSWVSHFPPGY-KQDRIVGMGMNEEEL----KRNPVLTEYVVQDLNLN 199
PG LD+C + W +Q ++VG+ +E L ++ L V+ L+ N
Sbjct: 47 PGSQALDVCCGTADWTIALAGAVGEQGKVVGLDFSENMLSVGKQKVEALQLKQVELLHGN 106
Query: 200 P-KLPFEDNSFDVIT 213
+LPFEDN+FD +T
Sbjct: 107 AMELPFEDNTFDYVT 121
>sp|Q6HL42|UBIE_BACHK Demethylmenaquinone methyltransferase OS=Bacillus thuringiensis
subsp. konkukian (strain 97-27) GN=ubiE PE=3 SV=1
Length = 237
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 148 PGVSILDLC---SSWVSHFPPGY-KQDRIVGMGMNEEEL----KRNPVLTEYVVQDLNLN 199
PG LD+C + W +Q ++VG+ +E L ++ L V+ L+ N
Sbjct: 47 PGSKALDVCCGTADWTIALAGAVGEQGKVVGLDFSENMLSVGKQKVEALQLKQVELLHGN 106
Query: 200 P-KLPFEDNSFDVIT 213
+LPFEDN+FD +T
Sbjct: 107 AMELPFEDNTFDYVT 121
>sp|Q63DL9|UBIE_BACCZ Demethylmenaquinone methyltransferase OS=Bacillus cereus (strain ZK
/ E33L) GN=ubiE PE=3 SV=1
Length = 237
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 148 PGVSILDLC---SSWVSHFPPGY-KQDRIVGMGMNEEEL----KRNPVLTEYVVQDLNLN 199
PG LD+C + W +Q ++VG+ +E L ++ L V+ L+ N
Sbjct: 47 PGSKALDVCCGTADWTIALAGAVGEQGKVVGLDFSENMLSVGKQKVEALQLKQVELLHGN 106
Query: 200 P-KLPFEDNSFDVIT 213
+LPFEDN+FD +T
Sbjct: 107 AMELPFEDNTFDYVT 121
>sp|B9IVN5|UBIE_BACCQ Demethylmenaquinone methyltransferase OS=Bacillus cereus (strain
Q1) GN=ubiE PE=3 SV=1
Length = 237
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 148 PGVSILDLC---SSWVSHFPPGY-KQDRIVGMGMNEEEL----KRNPVLTEYVVQDLNLN 199
PG LD+C + W +Q ++VG+ +E L ++ L V+ L+ N
Sbjct: 47 PGSKALDVCCGTADWTIALAGAVGEQGKVVGLDFSENMLSVGKQKVEALQLKQVELLHGN 106
Query: 200 P-KLPFEDNSFDVIT 213
+LPFEDN+FD +T
Sbjct: 107 AMELPFEDNTFDYVT 121
>sp|B7HL23|UBIE_BACC7 Demethylmenaquinone methyltransferase OS=Bacillus cereus (strain
AH187) GN=ubiE PE=3 SV=1
Length = 237
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 148 PGVSILDLC---SSWVSHFPPGY-KQDRIVGMGMNEEEL----KRNPVLTEYVVQDLNLN 199
PG LD+C + W +Q ++VG+ +E L ++ L V+ L+ N
Sbjct: 47 PGSKALDVCCGTADWTIALAGAVGEQGKVVGLDFSENMLSVGKQKVEALQLKQVELLHGN 106
Query: 200 P-KLPFEDNSFDVIT 213
+LPFEDN+FD +T
Sbjct: 107 AMELPFEDNTFDYVT 121
>sp|C1EN10|UBIE_BACC3 Demethylmenaquinone methyltransferase OS=Bacillus cereus (strain
03BB102) GN=ubiE PE=3 SV=1
Length = 237
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 148 PGVSILDLC---SSWVSHFPPGY-KQDRIVGMGMNEEEL----KRNPVLTEYVVQDLNLN 199
PG LD+C + W +Q ++VG+ +E L ++ L V+ L+ N
Sbjct: 47 PGSKALDVCCGTADWTIALAGAVGEQGKVVGLDFSENMLSVGKQKVEALQLKQVELLHGN 106
Query: 200 P-KLPFEDNSFDVIT 213
+LPFEDN+FD +T
Sbjct: 107 AMELPFEDNTFDYVT 121
>sp|B7JGZ8|UBIE_BACC0 Demethylmenaquinone methyltransferase OS=Bacillus cereus (strain
AH820) GN=ubiE PE=3 SV=1
Length = 237
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 148 PGVSILDLC---SSWVSHFPPGY-KQDRIVGMGMNEEEL----KRNPVLTEYVVQDLNLN 199
PG LD+C + W +Q ++VG+ +E L ++ L V+ L+ N
Sbjct: 47 PGSKALDVCCGTADWTIALAGAVGEQGKVVGLDFSENMLSVGKQKVEALQLKQVELLHGN 106
Query: 200 P-KLPFEDNSFDVIT 213
+LPFEDN+FD +T
Sbjct: 107 AMELPFEDNTFDYVT 121
>sp|Q81SW0|UBIE_BACAN Demethylmenaquinone methyltransferase OS=Bacillus anthracis GN=ubiE
PE=3 SV=1
Length = 237
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 148 PGVSILDLC---SSWVSHFPPGY-KQDRIVGMGMNEEEL----KRNPVLTEYVVQDLNLN 199
PG LD+C + W +Q ++VG+ +E L ++ L V+ L+ N
Sbjct: 47 PGSKALDVCCGTADWTIALAGAVGEQGKVVGLDFSENMLSVGKQKVEALQLKQVELLHGN 106
Query: 200 P-KLPFEDNSFDVIT 213
+LPFEDN+FD +T
Sbjct: 107 AMELPFEDNTFDYVT 121
>sp|C3L8S6|UBIE_BACAC Demethylmenaquinone methyltransferase OS=Bacillus anthracis (strain
CDC 684 / NRRL 3495) GN=ubiE PE=3 SV=1
Length = 237
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 148 PGVSILDLC---SSWVSHFPPGY-KQDRIVGMGMNEEEL----KRNPVLTEYVVQDLNLN 199
PG LD+C + W +Q ++VG+ +E L ++ L V+ L+ N
Sbjct: 47 PGSKALDVCCGTADWTIALAGAVGEQGKVVGLDFSENMLSVGKQKVEALQLKQVELLHGN 106
Query: 200 P-KLPFEDNSFDVIT 213
+LPFEDN+FD +T
Sbjct: 107 AMELPFEDNTFDYVT 121
>sp|C3P5A0|UBIE_BACAA Demethylmenaquinone methyltransferase OS=Bacillus anthracis (strain
A0248) GN=ubiE PE=3 SV=1
Length = 237
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 148 PGVSILDLC---SSWVSHFPPGY-KQDRIVGMGMNEEEL----KRNPVLTEYVVQDLNLN 199
PG LD+C + W +Q ++VG+ +E L ++ L V+ L+ N
Sbjct: 47 PGSKALDVCCGTADWTIALAGAVGEQGKVVGLDFSENMLSVGKQKVEALQLKQVELLHGN 106
Query: 200 P-KLPFEDNSFDVIT 213
+LPFEDN+FD +T
Sbjct: 107 AMELPFEDNTFDYVT 121
>sp|B2ICI8|ATPD_BEII9 ATP synthase subunit delta OS=Beijerinckia indica subsp. indica
(strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=atpH PE=3
SV=1
Length = 190
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 66 MAGTLGANSLIASARQRGAVEQVLKDVQWPEQFPFKEEDFQRFDESP 112
MAG A +L + A++ G ++QV D+Q + + ED QRF SP
Sbjct: 14 MAGRY-AQALFSLAKESGTIDQVASDLQRLREIYRESEDLQRFIGSP 59
>sp|P32980|ATPD_TOBAC ATP synthase delta chain, chloroplastic OS=Nicotiana tabacum
GN=ATPD PE=2 SV=1
Length = 248
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 1 MANLYRLTLQQRHRLPPVSTGVSSGYSTCLSCVSGVSKKSDCRRFKASRRLVVGLGAAFC 60
MA L + + + R PP T + SG + LS G+ + +++R G GAA
Sbjct: 1 MAALQQTPITFQSRSPP-PTQIISGPTAKLSFSGGLKLPKLTIKLRSNRTSRRGGGAAGS 59
Query: 61 SQFMTMAGTLGANSLIASARQRGAVEQVLKDVQWPEQFPFKEEDFQRF 108
+ AG+ AN+L A+ G +EQ D++ E+ E F F
Sbjct: 60 KMVASAAGSY-ANALADIAKSNGTLEQTTADLEKIEKISDDEAVFNFF 106
>sp|P27282|POLN_EEVVT Non-structural polyprotein OS=Venezuelan equine encephalitis virus
(strain Trinidad donkey) PE=1 SV=2
Length = 2492
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 14/131 (10%)
Query: 80 RQRGAVEQVLKDVQWPEQFPFKEEDFQRFDESPDSLFYE---TPRFVTHIDDPAIAALT- 135
+ R AVE V PE +DFQ ES ++ E R++ HI A T
Sbjct: 592 KGRYAVEPYHGKVVVPEGHAIPVQDFQALSESATIVYNEREFVNRYLHHIATHGGALNTD 651
Query: 136 -KYYSEVFPPSNTPGVSILDLCSSWVSHFPPGYKQDRIVGMGMNEEELKRNPVLTEYVVQ 194
+YY V PS G + D+ K++ + G+G+ E + +P E+ +
Sbjct: 652 EEYYKTV-KPSEHDGEYLYDIDRKQC------VKKELVTGLGLTGELV--DPPFHEFAYE 702
Query: 195 DLNLNPKLPFE 205
L P P++
Sbjct: 703 SLRTRPAAPYQ 713
>sp|P36328|POLN_EEVVP Non-structural polyprotein OS=Venezuelan equine encephalitis virus
(strain P676) PE=1 SV=1
Length = 2492
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 14/131 (10%)
Query: 80 RQRGAVEQVLKDVQWPEQFPFKEEDFQRFDESPDSLFYE---TPRFVTHIDDPAIAALT- 135
+ R AVE V PE +DFQ ES ++ E R++ HI A T
Sbjct: 592 KGRYAVEPYHGKVVVPEGHAIPVQDFQALSESATIVYNEREFVNRYLHHIATHGGALNTD 651
Query: 136 -KYYSEVFPPSNTPGVSILDLCSSWVSHFPPGYKQDRIVGMGMNEEELKRNPVLTEYVVQ 194
+YY V PS G + D+ K++ + G+G+ E + +P E+ +
Sbjct: 652 EEYYKTV-KPSEHDGEYLYDIDRKQC------VKKELVTGLGLTGELV--DPPFHEFAYE 702
Query: 195 DLNLNPKLPFE 205
L P P++
Sbjct: 703 SLRTRPAAPYQ 713
>sp|P36327|POLN_EEVV3 Non-structural polyprotein OS=Venezuelan equine encephalitis virus
(strain 3880) PE=2 SV=2
Length = 2485
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 14/131 (10%)
Query: 80 RQRGAVEQVLKDVQWPEQFPFKEEDFQRFDESPDSLFYE---TPRFVTHIDDPAIAALT- 135
+ R AVE V PE +DFQ ES ++ E R++ HI A T
Sbjct: 592 KGRYAVEPYHGKVVVPEGHAIPVQDFQALSESATIVYNEREFVNRYLHHIATHGGALNTD 651
Query: 136 -KYYSEVFPPSNTPGVSILDLCSSWVSHFPPGYKQDRIVGMGMNEEELKRNPVLTEYVVQ 194
+YY V PS G + D+ K++ + G+G+ E + +P E+ +
Sbjct: 652 EEYYKTV-KPSEHDGEYLYDIDRKQC------VKKELVTGLGLTGELV--DPPFHEFAYE 702
Query: 195 DLNLNPKLPFE 205
L P P++
Sbjct: 703 SLRTRPAAPYQ 713
>sp|B9E6L5|DER_MACCJ GTPase Der OS=Macrococcus caseolyticus (strain JCSC5402) GN=der
PE=3 SV=1
Length = 436
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 123 VTHIDDPAIAA-LTKYYS----EVFPPSNTPGVSILDLCSSWVSHFPPGYKQD 170
V ID+P + A + ++YS E FP S + G+ I DL HFP ++D
Sbjct: 118 VNKIDNPEMRADIYEFYSLGFGEPFPISGSHGLGIGDLLDEAAKHFPEQQEED 170
>sp|Q9LJX4|PUM5_ARATH Pumilio homolog 5 OS=Arabidopsis thaliana GN=APUM5 PE=1 SV=2
Length = 961
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 178 NEEELKRNPVLTEYVVQDLNLNPKLP 203
+EEE++ +P Y + ++NLNP+LP
Sbjct: 98 SEEEIRSDPAYVAYYLSNINLNPRLP 123
>sp|F1N5V1|UBP37_BOVIN Ubiquitin carboxyl-terminal hydrolase 37 OS=Bos taurus GN=USP37
PE=3 SV=1
Length = 981
Score = 32.0 bits (71), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 100 FKEEDFQRFDESPDSLFYETPRFVTHIDDPAIAALTK 136
F E+D Q E+PDS+ E P+ +T D + +TK
Sbjct: 742 FAEDDIQEMPENPDSVETEKPKTITEPDPASFTEITK 778
>sp|Q9ZW02|PUM3_ARATH Pumilio homolog 3 OS=Arabidopsis thaliana GN=APUM3 PE=1 SV=1
Length = 964
Score = 31.6 bits (70), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 174 GMGMNEEELKRNPVLTEYVVQDLNLNPKLP 203
G G ++EE +++P Y ++ LNP+LP
Sbjct: 91 GFGGDDEEFRKDPAYLSYYYANMKLNPRLP 120
>sp|Q9ZW07|PUM1_ARATH Pumilio homolog 1 OS=Arabidopsis thaliana GN=APUM1 PE=1 SV=1
Length = 968
Score = 31.6 bits (70), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 174 GMGMNEEELKRNPVLTEYVVQDLNLNPKLP 203
G G ++EE +++P Y ++ LNP+LP
Sbjct: 90 GFGGDDEEFRKDPAYLSYYYANMKLNPRLP 119
>sp|Q6DDX8|CEP76_XENLA Centrosomal protein of 76 kDa OS=Xenopus laevis GN=cep76 PE=2 SV=1
Length = 661
Score = 31.2 bits (69), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 13/82 (15%)
Query: 55 LGAAFCSQFMTMAGTLGANSLIASARQRGAVEQVLKDVQWPEQFPFKEEDFQRFDESPDS 114
L + +F T + L L+ + RQRG V++V+K++ + E +E
Sbjct: 32 LAESLREEFQTESQQLSEEDLMQALRQRGIVDEVMKELHFMEDRHTRE------------ 79
Query: 115 LFYETPRFVTHIDDPAIAALTK 136
TP+ TH D +L K
Sbjct: 80 -LTSTPKPATHYIDKETRSLRK 100
>sp|Q5UQP3|YR445_MIMIV Putative J domain-containing protein R445 OS=Acanthamoeba polyphaga
mimivirus GN=MIMI_R445 PE=4 SV=1
Length = 368
Score = 30.8 bits (68), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 140 EVFPPSNTPGVSILDLCSSWVSHFPPGYKQDRIVGMGMNEEELKRNPVLTEYVVQDLNLN 199
E+ PSN +S + + S GY + + N+ + K + + E QD+NL
Sbjct: 109 ELKEPSNEQKLSFKEQMKAINSKH--GYDTSQETAIPANQAKKKLSSLAKERASQDVNLR 166
Query: 200 PKLPFEDNSFDVIT 213
P+ F+D FD+ T
Sbjct: 167 PEKLFDDGRFDLGT 180
>sp|P75471|HMW2_MYCPN Cytadherence high molecular weight protein 2 OS=Mycoplasma pneumoniae
(strain ATCC 29342 / M129) GN=hmw2 PE=1 SV=1
Length = 1818
Score = 30.8 bits (68), Expect = 7.5, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 73 NSLIASARQRGAVEQVLKDVQWPEQFPFKEEDFQRFDESPDSLFYETPRFVTHID 127
N L RQR +E+ L +Q Q K+ DF++ ++ L +T + ++ D
Sbjct: 1659 NELTELRRQRALLEKKLDQIQLESQLSAKKNDFEKVEQMMQKLLEKTEQKLSAFD 1713
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,487,261
Number of Sequences: 539616
Number of extensions: 3684445
Number of successful extensions: 7806
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 7795
Number of HSP's gapped (non-prelim): 35
length of query: 220
length of database: 191,569,459
effective HSP length: 113
effective length of query: 107
effective length of database: 130,592,851
effective search space: 13973435057
effective search space used: 13973435057
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)